Citrus Sinensis ID: 011482

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480----
MVTKVKPLTILSLLLPLMVSLFLLAKGAHCFEGKKKLHLHKLQWQQKSGSSSSCVSHQKSRIEMGAITLELKHKNYCSGKIVDWNEQQQNRLILDNLHVQYLQSRIKNMISGNIKDVSNTEIPLTSGIRLQTLNYIATIELGGRNMTVIVDTGSDLTWVQCQPCKSCYNQQDPVFDPSISPSYKKVLCNSSTCHALEFATGNSGVCSSSSPPDCNYFVSYGDGSYTRGELGREHLGLGKASVNDFIFGCGRNNKGLFGGVSGLMGLGRSDLSLVSQTSEIFGGLFSYCLPSTQDAGASGSLILGGNSSVFKNSTPITYTNMIPNPQLATFYILNLTGISIGGKQLQASGFAKGGILIDSGTVITRLPPSIYSALKAEFLKQFSGFPSAPGFSILDTCFNLSAYQEVNIPLVKMEFEGNAEMTVDVTGIVYFVKSDASQVCLALASLSYEDETGIIGNYQQKNQRVIYDTKNSQLGFAGEDCSSM
ccccccHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEEEEEccccccccccccccccccccccEEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccEEEEEEEEccccEEEEEEccccEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEccccEEEEEEEEEEEEEcccccccEEEEEEcccccccccccEEEEcccccccHHHHHcccccccEEEEccccccccccccEEEccccccccccccEEEEccccccccccEEEEEEEEEEEccEEEcccccccccEEEEcccccccccHHHHHHHHHHHHHHHcccccccccccccccEEcccccccccccEEEEEcccEEEEEccccEEEEEEEcccEEEEEEEEcccccccEEEEcEEEEEEEEEEEccccEEEEEccccccc
cEEEEccHHHHHHHHHHHHHHHHHHccccccccccEEEEEEEEEccccccccccccccccccccccEEEEEEEcccccccccHHHHHHHHHHHHcHHHHHHHHHHHHHHHcccccccccccccccccccccccEEEEEEEEccccEEEEEEcccccEEEEccccccccccccccccccccccccccccccHHHHHcccccccccccccccccccEEEEEEcccccccEEEEEEEEEEccEEEccEEEEEcccccccccccccEEEccccccEEEcccccccccEEEEEEccccccccccEEEEEcccccccccccEEEEEEEEccccccEEEEEEEEEEEccEEEEcccccccEEEEEcccEEEcccHHHHHHHHHHHHHHHccccccccccccccEEEEccccEcEccEEEEEEEccEEEEcccccEEEEEcccccEEEEEEccccccccEEEEEEEEEccEEEEEEccccEEEEcccccccc
MVTKVKPLTILSLLLPLMVSLFLLAkgahcfegkkklHLHKLqwqqksgsssscvshqksrIEMGAITLELKHKNYCSGKIVDWNEQQQNRLILDNLHVQYLQSRIKNMIsgnikdvsnteipltsgirlqtLNYIATIELGGRNMTVIVDtgsdltwvqcqpckscynqqdpvfdpsispsykkvlcnsstchalefatgnsgvcssssppdcnyfvsygdgsytrgelgrehlglgkasvndfifgcgrnnkglfggvsglmglgrsdlslvsqtSEIFGGLfsyclpstqdagasgslilggnssvfknstpitytnmipnpqlaTFYILNLTGIsiggkqlqasgfakggilidsgtvitrlppsIYSALKAEFLKqfsgfpsapgfsildtcfnlsayqevniplvkmefegnaemtVDVTGIVYFVKSDASQVCLALASLsyedetgiignyqqknqrviydtknsqlgfagedcssm
MVTKVKPLTILSLLLPLMVSLFLLAKGAHCFEGKKKLHLHKLQwqqksgsssscvshqKSRIEMGAITLELKHKNYCSGKIVDWNEQQQNRLILDNLHVQYLQSRIKNMISGNIKDVSNTEIPLTSGIRLQTLNYIATIELGGRNMTVIVDTGSDLTWVQCQPCKSCYNQQDPVFDPSISPSYKKVLCNSSTCHALEFATGNSGVCSSSSPPDCNYFVSYGDGSYTRGELGREHLGLGKASVNDFIFGCGRNNKGLFGGVSGLMGLGRSDLSLVSQTSEIFGGLFSYCLPSTQDAGASGSLILGGNSSVFKNSTPITYTNMIPNPQLATFYILNLTGISIGGKQLQASGFAKGGILIDSGTVITRLPPSIYSALKAEFLKQFSGFPSAPGFSILDTCFNLSAYQEVNIPLVKMEFEGNAEMTVDVTGIVYFVKSDASQVCLALASLSYEDETGIIgnyqqknqrvIYDTKNSqlgfagedcssm
MVTKVKPltilslllplmvslfllAKGAHCFEGkkklhlhklqwqqksgsssscvshqksRIEMGAITLELKHKNYCSGKIVDWNEQQQNRLILDNLHVQYLQSRIKNMISGNIKDVSNTEIPLTSGIRLQTLNYIATIELGGRNMTVIVDTGSDLTWVQCQPCKSCYNQQDPVFDPSISPSYKKVLCNSSTCHALEFATGNSGVCSSSSPPDCNYFVSYGDGSYTrgelgrehlglgKASVNDFIFGCGRNNKGLFGGVSGLMGLGRSDLSLVSQTSEIFGGLFSYCLPSTQDAGASGSLILGGNSSVFKNSTPITYTNMIPNPQLATFYILNLTGISIGGKQLQASGFAKGGILIDSGTVITRLPPSIYSALKAEFLKQFSGFPSAPGFSILDTCFNLSAYQEVNIPLVKMEFEGNAEMTVDVTGIVYFVKSDASQVCLALASLSYEDETGIIGNYQQKNQRVIYDTKNSQLGFAGEDCSSM
*****KPLTILSLLLPLMVSLFLLAKGAHCFEGKKKLHLHKLQW*****************IEMGAITLELKHKNYCSGKIVDWNEQQQNRLILDNLHVQYLQSRIKNMISGNIKDVSNTEIPLTSGIRLQTLNYIATIELGGRNMTVIVDTGSDLTWVQCQPCKSCYN*****************LCNSSTCHALEFATGNSGVC******DCNYFVSYGDGSYTRGELGREHLGLGKASVNDFIFGCGRNNKGLFGGVSGLMGLGRSDLSLVSQTSEIFGGLFSYCLPSTQDAGASGSLILGGNSSVFKNSTPITYTNMIPNPQLATFYILNLTGISIGGKQLQASGFAKGGILIDSGTVITRLPPSIYSALKAEFLKQFSGFPSAPGFSILDTCFNLSAYQEVNIPLVKMEFEGNAEMTVDVTGIVYFVKSDASQVCLALASLSYEDETGIIGNYQQKNQRVIYDT***************
******P*TILSLLLPLMVSLFLLAKGAHCFEGKKKLHLHKL************************************************************************************GIRLQTLNYIATIELGGRNMTVIVDTGSDLTWVQCQPCKSCYN***********************CHALEFATG******SSSPPDCNYFVSYGDGSYTRGELGREHLGLGKASVNDFIFGCGRNNKGLFGGVSGLMGLGRSDLSLVSQTSEIFGGLFSYCLPSTQ*********LGGNSSVFKNSTPITYTNMIPNPQLATFYILNLTGISIGGKQLQASGFAKGGILIDSGTVITRLPPSIYSALKAEFLK**********FSILDTCFNLSAYQEVNIPLVKMEFEGNAEMTVDVTGIVYFVKSDASQVCLALASLSYEDETGIIGNYQQKNQRVIYDTKNSQLGFAGEDCSS*
MVTKVKPLTILSLLLPLMVSLFLLAKGAHCFEGKKKLHLHKL****************KSRIEMGAITLELKHKNYCSGKIVDWNEQQQNRLILDNLHVQYLQSRIKNMISGNIKDVSNTEIPLTSGIRLQTLNYIATIELGGRNMTVIVDTGSDLTWVQCQPCKSCYNQQDPVFDPSISPSYKKVLCNSSTCHALEFATG********SPPDCNYFVSYGDGSYTRGELGREHLGLGKASVNDFIFGCGRNNKGLFGGVSGLMGLGRSDLSLVSQTSEIFGGLFSYCLPSTQDAGASGSLILGGNSSVFKNSTPITYTNMIPNPQLATFYILNLTGISIGGKQLQASGFAKGGILIDSGTVITRLPPSIYSALKAEFLKQFSGFPSAPGFSILDTCFNLSAYQEVNIPLVKMEFEGNAEMTVDVTGIVYFVKSDASQVCLALASLSYEDETGIIGNYQQKNQRVIYDTKNSQLGFAGEDCSSM
MVTKVKPLTILSLLLPLMVSLFLLAKGAHCFEGKKKLHLHKLQWQQ******************GAITLELKHKNYCSGKIVDWNEQQQNRLILDNLHVQYLQSRIKNMISGN*KDVSNTEIPLTSGIRLQTLNYIATIELGGRNMTVIVDTGSDLTWVQCQPCKSCYNQQDPVFDPSISPSYKKVLCNSSTCHALEFATGN********PPDCNYFVSYGDGSYTRGELGREHLGLGKASVNDFIFGCGRNNKGLFGGVSGLMGLGRSDLSLVSQTSEIFGGLFSYCLPSTQDAGASGSLILGGNSSVFKNSTPITYTNMIPNPQLATFYILNLTGISIGGKQLQASGFAKGGILIDSGTVITRLPPSIYSALKAEFLKQFSGFPSAPGFSILDTCFNLSAYQEVNIPLVKMEFEGNAEMTVDVTGIVYFVKSDASQVCLALASLSYEDETGIIGNYQQKNQRVIYDTKNSQLGFAGEDC***
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MVTKVKPLTILSLLLPLMVSLFLLAKGAHCFEGKKKLHLHKLQWQQKSGSSSSCVSHQKSRIEMGAITLELKHKNYCSGKIVDWNEQQQNRLILDNLHVQYLQSRIKNMISGNIKDVSNTEIPLTSGIRLQTLNYIATIELGGRNMTVIVDTGSDLTWVQCQPCKSCYNQQDPVFDPSISPSYKKVLCNSSTCHALEFATGNSGVCSSSSPPDCNYFVSYGDGSYTRGELGREHLGLGKASVNDFIFGCGRNNKGLFGGVSGLMGLGRSDLSLVSQTSEIFGGLFSYCLPSTQDAGASGSLILGGNSSVFKNSTPITYTNMIPNPQLATFYILNLTGISIGGKQLQASGFAKGGILIDSGTVITRLPPSIYSALKAEFLKQFSGFPSAPGFSILDTCFNLSAYQEVNIPLVKMEFEGNAEMTVDVTGIVYFVKSDASQVCLALASLSYEDETGIIGNYQQKNQRVIYDTKNSQLGFAGEDCSSM
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query484 2.2.26 [Sep-21-2011]
Q9LHE3470 Protein ASPARTIC PROTEASE no no 0.814 0.838 0.348 4e-54
Q9LS40500 Protein ASPARTIC PROTEASE no no 0.801 0.776 0.325 1e-50
Q766C3437 Aspartic proteinase nepen N/A no 0.675 0.748 0.369 5e-49
Q6XBF8437 Aspartic proteinase CDR1 no no 0.743 0.823 0.357 3e-44
Q766C2438 Aspartic proteinase nepen N/A no 0.729 0.805 0.325 8e-42
Q3EBM5447 Probable aspartic proteas no no 0.814 0.881 0.316 1e-35
Q9S9K4475 Aspartic proteinase-like no no 0.712 0.726 0.262 1e-27
Q9LZL3453 Aspartic proteinase PCS1 no no 0.667 0.713 0.304 4e-27
Q9LX20528 Aspartic proteinase-like no no 0.692 0.634 0.271 1e-16
P22929390 Acid protease OS=Saccharo N/A no 0.694 0.861 0.254 2e-13
>sp|Q9LHE3|ASPG2_ARATH Protein ASPARTIC PROTEASE IN GUARD CELL 2 OS=Arabidopsis thaliana GN=ASPG2 PE=2 SV=1 Back     alignment and function desciption
 Score =  213 bits (541), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 150/431 (34%), Positives = 220/431 (51%), Gaps = 37/431 (8%)

Query: 68  TLELKHKN-YCSGKIVDWNEQQQNRLILDNLHVQYLQSRIKNMI---SGNIKDVSNTEIP 123
           TL L H++ + S    + + +   R+  D   V  +  RI   +   S +  +V++    
Sbjct: 60  TLRLLHRDRFPSVTYRNHHHRLHARMRRDTDRVSAILRRISGKVIPSSDSRYEVNDFGSD 119

Query: 124 LTSGIRLQTLNYIATIELGG--RNMTVIVDTGSDLTWVQCQPCKSCYNQQDPVFDPSISP 181
           + SG+   +  Y   I +G   R+  +++D+GSD+ WVQCQPCK CY Q DPVFDP+ S 
Sbjct: 120 IVSGMDQGSGEYFVRIGVGSPPRDQYMVIDSGSDMVWVQCQPCKLCYKQSDPVFDPAKSG 179

Query: 182 SYKKVLCNSSTCHALEFATGNSGVCSSSSPPDCNYFVSYGDGSYTRGELGREHLGLGKAS 241
           SY  V C SS C  +E    NSG C S     C Y V YGDGSYT+G L  E L   K  
Sbjct: 180 SYTGVSCGSSVCDRIE----NSG-CHSGG---CRYEVMYGDGSYTKGTLALETLTFAKTV 231

Query: 242 VNDFIFGCGRNNKGLFGGVSGLMGLGRSDLSLVSQTSEIFGGLFSYCLPSTQDAGASGSL 301
           V +   GCG  N+G+F G +GL+G+G   +S V Q S   GG F YCL S +   ++GSL
Sbjct: 232 VRNVAMGCGHRNRGMFIGAAGLLGIGGGSMSFVGQLSGQTGGAFGYCLVS-RGTDSTGSL 290

Query: 302 ILGGNSSVFKNSTPI--TYTNMIPNPQLATFYILNLTG-------ISIGGKQLQASGFAK 352
           + G      + + P+  ++  ++ NP+  +FY + L G       I +       +    
Sbjct: 291 VFG------REALPVGASWVPLVRNPRAPSFYYVGLKGLGVGGVRIPLPDGVFDLTETGD 344

Query: 353 GGILIDSGTVITRLPPSIYSALKAEFLKQFSGFPSAPGFSILDTCFNLSAYQEVNIPLVK 412
           GG+++D+GT +TRLP + Y A +  F  Q +  P A G SI DTC++LS +  V +P V 
Sbjct: 345 GGVVMDTGTAVTRLPTAAYVAFRDGFKSQTANLPRASGVSIFDTCYDLSGFVSVRVPTVS 404

Query: 413 MEFEGNAEMTVDVTGIVYFVKSDASQVCLALASLSYEDETG--IIGNYQQKNQRVIYDTK 470
             F     +T+     +  V  D+   C A A+      TG  IIGN QQ+  +V +D  
Sbjct: 405 FYFTEGPVLTLPARNFLMPVD-DSGTYCFAFAA----SPTGLSIIGNIQQEGIQVSFDGA 459

Query: 471 NSQLGFAGEDC 481
           N  +GF    C
Sbjct: 460 NGFVGFGPNVC 470
Aspartic protease that may be involved in drought avoidance through abscisic acid signaling.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 4EC: .EC: 2EC: 3EC: .EC: -
>sp|Q9LS40|ASPG1_ARATH Protein ASPARTIC PROTEASE IN GUARD CELL 1 OS=Arabidopsis thaliana GN=ASPG1 PE=1 SV=1 Back     alignment and function description
>sp|Q766C3|NEP1_NEPGR Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis GN=nep1 PE=1 SV=1 Back     alignment and function description
>sp|Q6XBF8|CDR1_ARATH Aspartic proteinase CDR1 OS=Arabidopsis thaliana GN=CDR1 PE=1 SV=1 Back     alignment and function description
>sp|Q766C2|NEP2_NEPGR Aspartic proteinase nepenthesin-2 OS=Nepenthes gracilis GN=nep2 PE=1 SV=1 Back     alignment and function description
>sp|Q3EBM5|ASPR1_ARATH Probable aspartic protease At2g35615 OS=Arabidopsis thaliana GN=At2g35615 PE=3 SV=1 Back     alignment and function description
>sp|Q9S9K4|ASPL2_ARATH Aspartic proteinase-like protein 2 OS=Arabidopsis thaliana GN=At1g65240 PE=1 SV=2 Back     alignment and function description
>sp|Q9LZL3|PCS1L_ARATH Aspartic proteinase PCS1 OS=Arabidopsis thaliana GN=PCS1 PE=2 SV=1 Back     alignment and function description
>sp|Q9LX20|ASPL1_ARATH Aspartic proteinase-like protein 1 OS=Arabidopsis thaliana GN=At5g10080 PE=1 SV=1 Back     alignment and function description
>sp|P22929|CARP_SACFI Acid protease OS=Saccharomycopsis fibuligera GN=PEP1 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query484
224053042482 predicted protein [Populus trichocarpa] 0.940 0.943 0.703 0.0
255543383414 Aspartic proteinase nepenthesin-1 precur 0.847 0.990 0.729 1e-177
224072755412 predicted protein [Populus trichocarpa] 0.845 0.992 0.721 1e-175
297842769489 aspartyl protease family protein [Arabid 0.929 0.920 0.636 1e-164
356526294414 PREDICTED: aspartic proteinase nepenthes 0.849 0.992 0.680 1e-161
356523155412 PREDICTED: aspartic proteinase nepenthes 0.847 0.995 0.682 1e-161
388504358480 unknown [Medicago truncatula] 0.971 0.979 0.598 1e-160
356557203470 PREDICTED: aspartic proteinase nepenthes 0.896 0.923 0.631 1e-158
18412482484 aspartyl protease-like protein [Arabidop 0.931 0.931 0.623 1e-157
21595063484 putative aspartyl protease [Arabidopsis 0.931 0.931 0.621 1e-156
>gi|224053042|ref|XP_002297678.1| predicted protein [Populus trichocarpa] gi|222844936|gb|EEE82483.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  667 bits (1722), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 325/462 (70%), Positives = 384/462 (83%), Gaps = 7/462 (1%)

Query: 23  LLAKGAHCFEGKKKLHLHKLQWQQKSGSSSSCVSHQKSRIEMGAITLELKHKNYCSGKIV 82
           +   G  CF+GKK L +HK QW+Q S +SS+C+S Q++R E GA  LE+KHK+ CSGKI+
Sbjct: 24  IFDNGVQCFQGKKVLSMHKFQWKQGS-NSSTCLS-QETRWENGATILEMKHKDSCSGKIL 81

Query: 83  DWNEQQQNRLILDNLHVQYLQSRIKNMISG-NIKDVSNTEIPLTSGIRLQTLNYIATIEL 141
           DWN++ +  LI+D+  ++ LQSR+K++ISG NI D  +  IPLTSGIRLQTLNYI T+EL
Sbjct: 82  DWNKKLKKHLIMDDFQLRSLQSRMKSIISGRNIDDSVDAPIPLTSGIRLQTLNYIVTVEL 141

Query: 142 GGRNMTVIVDTGSDLTWVQCQPCKSCYNQQDPVFDPSISPSYKKVLCNSSTCHALEFATG 201
           GGR MTVIVDTGSDL+WVQCQPCK CYNQQDPVF+PS SPSY+ VLC+S TC +L+ ATG
Sbjct: 142 GGRKMTVIVDTGSDLSWVQCQPCKRCYNQQDPVFNPSTSPSYRTVLCSSPTCQSLQSATG 201

Query: 202 NSGVCSSSSPPDCNYFVSYGDGSYTRGELGREHLGLGKAS-VNDFIFGCGRNNKGLFGGV 260
           N GVC S+ PP CNY V+YGDGSYTRGELG EHL LG ++ VN+FIFGCGRNN+GLFGG 
Sbjct: 202 NLGVCGSN-PPSCNYVVNYGDGSYTRGELGTEHLDLGNSTAVNNFIFGCGRNNQGLFGGA 260

Query: 261 SGLMGLGRSDLSLVSQTSEIFGGLFSYCLPSTQDAGASGSLILGGNSSVFKNSTPITYTN 320
           SGL+GLGRS LSL+SQTS +FGG+FSYCLP T+   ASGSL++GGNSSV+KN+TPI+YT 
Sbjct: 261 SGLVGLGRSSLSLISQTSAMFGGVFSYCLPITETE-ASGSLVMGGNSSVYKNTTPISYTR 319

Query: 321 MIPNPQLATFYILNLTGISIGGKQLQASGFAKGGILIDSGTVITRLPPSIYSALKAEFLK 380
           MIPNPQL  FY LNLTGI++G   +QA  F K G++IDSGTVITRLPPSIY ALK EF+K
Sbjct: 320 MIPNPQLP-FYFLNLTGITVGSVAVQAPSFGKDGMMIDSGTVITRLPPSIYQALKDEFVK 378

Query: 381 QFSGFPSAPGFSILDTCFNLSAYQEVNIPLVKMEFEGNAEMTVDVTGIVYFVKSDASQVC 440
           QFSGFPSAP F ILDTCFNLS YQEV IP +KM FEGNAE+ VDVTG+ YFVK+DASQVC
Sbjct: 379 QFSGFPSAPAFMILDTCFNLSGYQEVEIPNIKMHFEGNAELNVDVTGVFYFVKTDASQVC 438

Query: 441 LALASLSYEDETGIIGNYQQKNQRVIYDTKNSQLGFAGEDCS 482
           LA+ASLSYE+E GIIGNYQQKNQRVIYDTK S LGFA E C+
Sbjct: 439 LAIASLSYENEVGIIGNYQQKNQRVIYDTKGSMLGFAAEACT 480

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255543383|ref|XP_002512754.1| Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis] gi|223547765|gb|EEF49257.1| Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224072755|ref|XP_002303865.1| predicted protein [Populus trichocarpa] gi|222841297|gb|EEE78844.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297842769|ref|XP_002889266.1| aspartyl protease family protein [Arabidopsis lyrata subsp. lyrata] gi|297335107|gb|EFH65525.1| aspartyl protease family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|356526294|ref|XP_003531753.1| PREDICTED: aspartic proteinase nepenthesin-1-like [Glycine max] Back     alignment and taxonomy information
>gi|356523155|ref|XP_003530207.1| PREDICTED: aspartic proteinase nepenthesin-1-like [Glycine max] Back     alignment and taxonomy information
>gi|388504358|gb|AFK40245.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|356557203|ref|XP_003546907.1| PREDICTED: aspartic proteinase nepenthesin-1-like [Glycine max] Back     alignment and taxonomy information
>gi|18412482|ref|NP_565219.1| aspartyl protease-like protein [Arabidopsis thaliana] gi|19699359|gb|AAL91289.1| At1g79720/F19K16_30 [Arabidopsis thaliana] gi|26450464|dbj|BAC42346.1| unknown protein [Arabidopsis thaliana] gi|115646741|gb|ABJ17101.1| At1g79720 [Arabidopsis thaliana] gi|332198170|gb|AEE36291.1| aspartyl protease-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|21595063|gb|AAM66069.1| putative aspartyl protease [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query484
TAIR|locus:2017799484 AT1G79720 [Arabidopsis thalian 0.851 0.851 0.645 1e-146
TAIR|locus:2183730474 AT5G10770 "AT5G10770" [Arabido 0.785 0.801 0.424 1.3e-77
TAIR|locus:2183715464 AT5G10760 [Arabidopsis thalian 0.814 0.849 0.361 4.1e-65
TAIR|locus:2076745483 AT3G61820 [Arabidopsis thalian 0.712 0.714 0.379 5e-60
TAIR|locus:2035297485 AT1G01300 [Arabidopsis thalian 0.826 0.824 0.354 5.7e-59
TAIR|locus:2095365470 AT3G20015 [Arabidopsis thalian 0.814 0.838 0.343 1.2e-58
TAIR|locus:2095042500 ASPG1 "ASPARTIC PROTEASE IN GU 0.811 0.786 0.322 1.5e-53
TAIR|locus:2031225483 AT1G25510 [Arabidopsis thalian 0.791 0.792 0.324 1.5e-51
TAIR|locus:2045615527 AT2G42980 [Arabidopsis thalian 0.733 0.673 0.327 2.8e-50
TAIR|locus:2145954437 CDR1 "CONSTITUTIVE DISEASE RES 0.752 0.832 0.350 2.8e-50
TAIR|locus:2017799 AT1G79720 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1433 (509.5 bits), Expect = 1.0e-146, P = 1.0e-146
 Identities = 270/418 (64%), Positives = 329/418 (78%)

Query:    68 TLELKHKNYCSGKIVDWNEQQQNRLILDNLHVQYLQSRIKNMISGNIKD-VSNTEIPLTS 126
             TLE+KH+  CSGK +D  ++ +  L+LDN+ VQ LQ +IK M S   +  VS T+IPLTS
Sbjct:    67 TLEMKHRELCSGKTIDLGKKMRRALVLDNIRVQSLQLKIKAMTSSTTEQSVSETQIPLTS 126

Query:   127 GIRLQTLNYIATIELGGRNMTVIVDTGSDLTWVQCQPCKSCYNQQDPVFDPSISPSYKKV 186
             GI+L++LNYI T+ELGG+NM++IVDTGSDLTWVQCQPC+SCYNQQ P++DPS+S SYK V
Sbjct:   127 GIKLESLNYIVTVELGGKNMSLIVDTGSDLTWVQCQPCRSCYNQQGPLYDPSVSSSYKTV 186

Query:   187 LCNSSTCHALEFATGNSGVCSSSS---PPDCNYFVSYGDGSYTXXXXXXXXXXXXKASVN 243
              CNSSTC  L  AT NSG C  ++      C Y VSYGDGSYT               + 
Sbjct:   187 FCNSSTCQDLVAATSNSGPCGGNNGVVKTPCEYVVSYGDGSYTRGDLASESILLGDTKLE 246

Query:   244 DFIFGCGRNNKGLFGGVSGLMGLGRSDLSLVSQTSEIFGGLFSYCLPSTQDAGASGSLIL 303
             +F+FGCGRNNKGLFGG SGLMGLGRS +SLVSQT + F G+FSYCLPS +D GASGSL  
Sbjct:   247 NFVFGCGRNNKGLFGGSSGLMGLGRSSVSLVSQTLKTFNGVFSYCLPSLED-GASGSLSF 305

Query:   304 GGNSSVFKNSTPITYTNMIPNPQLATFYILNLTGISIGGKQLQASGFAKGGILIDSGTVI 363
             G +SSV+ NST ++YT ++ NPQL +FYILNLTG SIGG +L++S F +G ILIDSGTVI
Sbjct:   306 GNDSSVYTNSTSVSYTPLVQNPQLRSFYILNLTGASIGGVELKSSSFGRG-ILIDSGTVI 364

Query:   364 TRLPPSIYSALKAEFLKQFSGFPSAPGFSILDTCFNLSAYQEVNIPLVKMEFEGNAEMTV 423
             TRLPPSIY A+K EFLKQFSGFP+APG+SILDTCFNL++Y++++IP++KM F+GNAE+ V
Sbjct:   365 TRLPPSIYKAVKIEFLKQFSGFPTAPGYSILDTCFNLTSYEDISIPIIKMIFQGNAELEV 424

Query:   424 DVTGIVYFVKSDASQVCLALASLSYEDETGIIGNYQQKNQRVIYDTKNSQLGFAGEDC 481
             DVTG+ YFVK DAS VCLALASLSYE+E GIIGNYQQKNQRVIYDT   +LG  GE+C
Sbjct:   425 DVTGVFYFVKPDASLVCLALASLSYENEVGIIGNYQQKNQRVIYDTTQERLGIVGENC 482
GO:0004190 "aspartic-type endopeptidase activity" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0006508 "proteolysis" evidence=IEA;ISS
GO:0048046 "apoplast" evidence=IDA
TAIR|locus:2183730 AT5G10770 "AT5G10770" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2183715 AT5G10760 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2076745 AT3G61820 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2035297 AT1G01300 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2095365 AT3G20015 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2095042 ASPG1 "ASPARTIC PROTEASE IN GUARD CELL 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031225 AT1G25510 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2045615 AT2G42980 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2145954 CDR1 "CONSTITUTIVE DISEASE RESISTANCE 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.230.766
3rd Layer3.4.23.120.824

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
eugene3.00010143
hypothetical protein (483 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query484
cd05472299 cd05472, cnd41_like, Chloroplast Nucleoids DNA-bin 1e-136
PLN03146431 PLN03146, PLN03146, aspartyl protease family prote 2e-72
cd05476265 cd05476, pepsin_A_like_plant, Chroloplast Nucleoid 9e-69
cd05471283 cd05471, pepsin_like, Pepsin-like aspartic proteas 1e-49
pfam00026316 pfam00026, Asp, Eukaryotic aspartyl protease 3e-27
cd05489362 cd05489, xylanase_inhibitor_I_like, TAXI-I inhibit 4e-26
cd06096326 cd06096, Plasmepsin_5, Plasmepsins are a class of 3e-18
cd05475273 cd05475, nucellin_like, Nucellins, plant aspartic 3e-16
cd05474295 cd05474, SAP_like, SAPs, pepsin-like proteinases s 5e-12
cd05488320 cd05488, Proteinase_A_fungi, Fungal Proteinase A , 7e-10
cd05470109 cd05470, pepsin_retropepsin_like, Cellular and ret 8e-10
cd06097278 cd06097, Aspergillopepsin_like, Aspergillopepsin_l 9e-10
cd05477318 cd05477, gastricsin, Gastricsins, asparate proteas 2e-06
cd05478317 cd05478, pepsin_A, Pepsin A, aspartic protease pro 2e-06
cd05486316 cd05486, Cathespin_E, Cathepsin E, non-lysosomal a 3e-05
cd05485329 cd05485, Cathepsin_D_like, Cathepsin_D_like, pepsi 7e-04
PTZ00013450 PTZ00013, PTZ00013, plasmepsin 4 (PM4); Provisiona 9e-04
PTZ00165482 PTZ00165, PTZ00165, aspartyl protease; Provisional 0.001
cd06098317 cd06098, phytepsin, Phytepsin, a plant homolog of 0.002
>gnl|CDD|133139 cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information 
 Score =  394 bits (1014), Expect = e-136
 Identities = 158/353 (44%), Positives = 209/353 (59%), Gaps = 59/353 (16%)

Query: 134 NYIATIELGG--RNMTVIVDTGSDLTWVQCQPCKSCYNQQDPVFDPSISPSYKKVLCNSS 191
            Y+ T+ LG   R+ TVIVDTGSDLTWVQCQPC                           
Sbjct: 1   EYVVTVGLGTPARDQTVIVDTGSDLTWVQCQPC--------------------------- 33

Query: 192 TCHALEFATGNSGVCSSSSPPDCNYFVSYGDGSYTRGELGREHLGLGKA-SVNDFIFGCG 250
                                 C Y VSYGDGSYT G+L  + L LG +  V  F FGCG
Sbjct: 34  ----------------------CLYQVSYGDGSYTTGDLATDTLTLGSSDVVPGFAFGCG 71

Query: 251 RNNKGLFGGVSGLMGLGRSDLSLVSQTSEIFGGLFSYCLPSTQDAGASGSLILGGNSSVF 310
            +N+GLFGG +GL+GLGR  LSL SQT+  +GG+FSYCLP      +SG L  G  +SV 
Sbjct: 72  HDNEGLFGGAAGLLGLGRGKLSLPSQTASSYGGVFSYCLPDRSS-SSSGYLSFGAAASV- 129

Query: 311 KNSTPITYTNMIPNPQLATFYILNLTGISIGGKQLQ--ASGFAKGGILIDSGTVITRLPP 368
                 ++T M+ NP++ TFY + LTGIS+GG++L    + F  GG++IDSGTVITRLPP
Sbjct: 130 --PAGASFTPMLSNPRVPTFYYVGLTGISVGGRRLPIPPASFGAGGVIIDSGTVITRLPP 187

Query: 369 SIYSALKAEFLKQFSGFPSAPGFSILDTCFNLSAYQEVNIPLVKMEFEGNAEMTVDVTGI 428
           S Y+AL+  F    + +P APGFSILDTC++LS ++ V++P V + F+G A++ +D +G+
Sbjct: 188 SAYAALRDAFRAAMAAYPRAPGFSILDTCYDLSGFRSVSVPTVSLHFQGGADVELDASGV 247

Query: 429 VYFVKSDASQVCLALASLSYEDETGIIGNYQQKNQRVIYDTKNSQLGFAGEDC 481
           +Y V  D+SQVCLA A  S +    IIGN QQ+  RV+YD    ++GFA   C
Sbjct: 248 LYPV-DDSSQVCLAFAGTSDDGGLSIIGNVQQQTFRVVYDVAGGRIGFAPGGC 299

Chloroplast Nucleoids DNA-binding Protease catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) in senescent leaves of tobacco. Antisense tobacco with reduced amount of CND41 maintained green leaves and constant protein levels, especially Rubisco. CND41 has DNA-binding as well as aspartic protease activities. The pepsin-like aspartic protease domain is located at the C-terminus of the protein. The enzyme is characterized by having two aspartic protease catalytic site motifs, the Asp-Thr-Gly-Ser in the N-terminal and Asp-Ser-Gly-Ser in the C-terminal region. Aspartic proteases are bilobal enzymes, each lobe contributing a catalytic Asp residue, with an extended active site cleft localized between the two lobes of the molecule. One lobe may be evolved from the other through ancient gene-duplication event. This family of aspartate proteases is classified by MEROPS as the peptidase family A1 (pepsin A, clan AA). Length = 299
>gnl|CDD|178691 PLN03146, PLN03146, aspartyl protease family protein; Provisional Back     alignment and domain information
>gnl|CDD|133143 cd05476, pepsin_A_like_plant, Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information
>gnl|CDD|133138 cd05471, pepsin_like, Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>gnl|CDD|215663 pfam00026, Asp, Eukaryotic aspartyl protease Back     alignment and domain information
>gnl|CDD|133156 cd05489, xylanase_inhibitor_I_like, TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information
>gnl|CDD|133160 cd06096, Plasmepsin_5, Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite Back     alignment and domain information
>gnl|CDD|133142 cd05475, nucellin_like, Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information
>gnl|CDD|133141 cd05474, SAP_like, SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins Back     alignment and domain information
>gnl|CDD|133155 cd05488, Proteinase_A_fungi, Fungal Proteinase A , aspartic proteinase superfamily Back     alignment and domain information
>gnl|CDD|133137 cd05470, pepsin_retropepsin_like, Cellular and retroviral pepsin-like aspartate proteases Back     alignment and domain information
>gnl|CDD|133161 cd06097, Aspergillopepsin_like, Aspergillopepsin_like, aspartic proteases of fungal origin Back     alignment and domain information
>gnl|CDD|133144 cd05477, gastricsin, Gastricsins, asparate proteases produced in gastric mucosa Back     alignment and domain information
>gnl|CDD|133145 cd05478, pepsin_A, Pepsin A, aspartic protease produced in gastric mucosa of mammals Back     alignment and domain information
>gnl|CDD|133153 cd05486, Cathespin_E, Cathepsin E, non-lysosomal aspartic protease Back     alignment and domain information
>gnl|CDD|133152 cd05485, Cathepsin_D_like, Cathepsin_D_like, pepsin family of proteinases Back     alignment and domain information
>gnl|CDD|140051 PTZ00013, PTZ00013, plasmepsin 4 (PM4); Provisional Back     alignment and domain information
>gnl|CDD|240300 PTZ00165, PTZ00165, aspartyl protease; Provisional Back     alignment and domain information
>gnl|CDD|133162 cd06098, phytepsin, Phytepsin, a plant homolog of mammalian lysosomal pepsins Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 484
PLN03146431 aspartyl protease family protein; Provisional 100.0
KOG1339398 consensus Aspartyl protease [Posttranslational mod 100.0
cd05472299 cnd41_like Chloroplast Nucleoids DNA-binding Prote 100.0
cd05489362 xylanase_inhibitor_I_like TAXI-I inhibits degradat 100.0
cd05490325 Cathepsin_D2 Cathepsin_D2, pepsin family of protei 100.0
cd06096326 Plasmepsin_5 Plasmepsins are a class of aspartic p 100.0
cd05478317 pepsin_A Pepsin A, aspartic protease produced in g 100.0
PTZ00165482 aspartyl protease; Provisional 100.0
cd05486316 Cathespin_E Cathepsin E, non-lysosomal aspartic pr 100.0
cd05477318 gastricsin Gastricsins, asparate proteases produce 100.0
cd05488320 Proteinase_A_fungi Fungal Proteinase A , aspartic 100.0
cd05485329 Cathepsin_D_like Cathepsin_D_like, pepsin family o 100.0
cd05487326 renin_like Renin stimulates production of angioten 100.0
cd06098317 phytepsin Phytepsin, a plant homolog of mammalian 100.0
PTZ00147453 plasmepsin-1; Provisional 100.0
PTZ00013450 plasmepsin 4 (PM4); Provisional 100.0
cd05473364 beta_secretase_like Beta-secretase, aspartic-acid 100.0
cd05475273 nucellin_like Nucellins, plant aspartic proteases 100.0
cd05476265 pepsin_A_like_plant Chroloplast Nucleoids DNA-bind 100.0
cd06097278 Aspergillopepsin_like Aspergillopepsin_like, aspar 100.0
cd05474295 SAP_like SAPs, pepsin-like proteinases secreted fr 100.0
PF00026317 Asp: Eukaryotic aspartyl protease The Prosite entr 100.0
cd05471283 pepsin_like Pepsin-like aspartic proteases, biloba 100.0
PF14543164 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 99.97
PF14541161 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 99.95
cd05470109 pepsin_retropepsin_like Cellular and retroviral pe 99.87
cd0548396 retropepsin_like_bacteria Bacterial aspartate prot 98.18
TIGR02281121 clan_AA_DTGA clan AA aspartic protease, TIGR02281 96.78
PF1365090 Asp_protease_2: Aspartyl protease 96.58
cd05479124 RP_DDI RP_DDI; retropepsin-like domain of DNA dama 95.38
cd05479124 RP_DDI RP_DDI; retropepsin-like domain of DNA dama 93.02
cd0548491 retropepsin_like_LTR_2 Retropepsins_like_LTR, peps 92.22
TIGR03698107 clan_AA_DTGF clan AA aspartic protease, AF_0612 fa 89.96
cd0609586 RP_RTVL_H_like Retropepsin of the RTVL_H family of 89.23
PF1397572 gag-asp_proteas: gag-polyprotein putative aspartyl 88.83
PF11925370 DUF3443: Protein of unknown function (DUF3443); In 88.7
PF08284135 RVP_2: Retroviral aspartyl protease; InterPro: IPR 88.51
PF00077100 RVP: Retroviral aspartyl protease The Prosite entr 85.82
COG3577215 Predicted aspartyl protease [General function pred 82.43
>PLN03146 aspartyl protease family protein; Provisional Back     alignment and domain information 
Probab=100.00  E-value=2.5e-72  Score=582.30  Aligned_cols=392  Identities=34%  Similarity=0.614  Sum_probs=321.6

Q ss_pred             CCceEEEEEec-cCCCCCCC---CchHHHHHHHhhhHHHHHHHHHHHhccccCCcccCCccccccccCccccceeEEEEE
Q 011482           64 MGAITLELKHK-NYCSGKIV---DWNEQQQNRLILDNLHVQYLQSRIKNMISGNIKDVSNTEIPLTSGIRLQTLNYIATI  139 (484)
Q Consensus        64 ~~~~~l~l~hr-~~~s~~~~---~~~~~~~~~~~~d~~r~~~l~~r~~~~~~~~~~~~~~~~~pl~~~~~~~~~~Y~~~v  139 (484)
                      .++++++|+|| +||+|.+.   .+.++++++++|+++|+++|.++..            ...|+..+...++++|+++|
T Consensus        22 ~~~~~~~l~h~~~~~sp~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~------------~~~~~~~~~~~~~~~Y~v~i   89 (431)
T PLN03146         22 KGGFTVDLIHRDSPKSPFYNPSETPSQRLRNAFRRSISRVNHFRPTDA------------SPNDPQSDLISNGGEYLMNI   89 (431)
T ss_pred             CCceEEEEEeCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHhhccc------------cCCccccCcccCCccEEEEE
Confidence            35699999999 78888543   3457899999999999988865421            12344444445677899999


Q ss_pred             EEcC--EEEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCcceecCCCcccccccccCCCCCCCCCCCCCCCeee
Q 011482          140 ELGG--RNMTVIVDTGSDLTWVQCQPCKSCYNQQDPVFDPSISPSYKKVLCNSSTCHALEFATGNSGVCSSSSPPDCNYF  217 (484)
Q Consensus       140 ~iGt--q~~~vivDTGS~~~Wv~~~~C~~C~~~~~~~ydps~Sst~~~v~C~s~~C~~~~~~~~~~~~C~~~~~~~C~~~  217 (484)
                      .|||  |++.|++||||+++||+|.+|..|+.|.++.|||++|+||+.++|+++.|..+...    ..|..+  +.|.|.
T Consensus        90 ~iGTPpq~~~vi~DTGS~l~Wv~C~~C~~C~~~~~~~fdps~SST~~~~~C~s~~C~~~~~~----~~c~~~--~~c~y~  163 (431)
T PLN03146         90 SIGTPPVPILAIADTGSDLIWTQCKPCDDCYKQVSPLFDPKKSSTYKDVSCDSSQCQALGNQ----ASCSDE--NTCTYS  163 (431)
T ss_pred             EcCCCCceEEEEECCCCCcceEcCCCCcccccCCCCcccCCCCCCCcccCCCCcccccCCCC----CCCCCC--CCCeeE
Confidence            9999  99999999999999999999999999999999999999999999999999865432    346543  569999


Q ss_pred             EEcCCCceEeEEEEEEEEEecc-----ccccceEEEEEeccCCCCC-CcCeeeecCCCCCccccchhhccCCeeEEeeCC
Q 011482          218 VSYGDGSYTRGELGREHLGLGK-----ASVNDFIFGCGRNNKGLFG-GVSGLMGLGRSDLSLVSQTSEIFGGLFSYCLPS  291 (484)
Q Consensus       218 ~~Ygdgs~~~G~~~~Dtltlg~-----~~~~~~~fG~~~~~~~~~~-~~~GIlGLg~~~~Sl~~ql~~~~~~~FS~~L~~  291 (484)
                      +.|+||+.+.|++++|+|+|++     ..++++.|||++.+.+.|. ..+||||||++++|+++|+...++++|||||++
T Consensus       164 i~Ygdgs~~~G~l~~Dtltlg~~~~~~~~v~~~~FGc~~~~~g~f~~~~~GilGLG~~~~Sl~sql~~~~~~~FSycL~~  243 (431)
T PLN03146        164 YSYGDGSFTKGNLAVETLTIGSTSGRPVSFPGIVFGCGHNNGGTFDEKGSGIVGLGGGPLSLISQLGSSIGGKFSYCLVP  243 (431)
T ss_pred             EEeCCCCceeeEEEEEEEEeccCCCCcceeCCEEEeCCCCCCCCccCCCceeEecCCCCccHHHHhhHhhCCcEEEECCC
Confidence            9999999889999999999987     3588999999999888664 589999999999999999987767899999986


Q ss_pred             CC-CCCCcceEEecCCCccccCCCCeEEeeCcCCCCCCceEEEEEeEEEEcCEEee--cCCC---CCCcEEEcccccccc
Q 011482          292 TQ-DAGASGSLILGGNSSVFKNSTPITYTNMIPNPQLATFYILNLTGISIGGKQLQ--ASGF---AKGGILIDSGTVITR  365 (484)
Q Consensus       292 ~~-~~~~~G~L~fGg~~~~~~~~~~~~~~pl~~~~~~~~~y~v~l~~i~vg~~~i~--~~~~---~~~~~iiDSGTt~t~  365 (484)
                      .. +....|.|+||+. .++. ...+.|+|++.+.. +.+|+|+|++|+||++.++  ...|   +.+++||||||++|+
T Consensus       244 ~~~~~~~~g~l~fG~~-~~~~-~~~~~~tPl~~~~~-~~~y~V~L~gIsVgg~~l~~~~~~~~~~~~g~~iiDSGTt~t~  320 (431)
T PLN03146        244 LSSDSNGTSKINFGTN-AIVS-GSGVVSTPLVSKDP-DTFYYLTLEAISVGSKKLPYTGSSKNGVEEGNIIIDSGTTLTL  320 (431)
T ss_pred             CCCCCCCcceEEeCCc-cccC-CCCceEcccccCCC-CCeEEEeEEEEEECCEECcCCccccccCCCCcEEEeCCcccee
Confidence            41 2245799999994 3333 34589999986422 4799999999999999865  3222   235899999999999


Q ss_pred             cCHHHHHHHHHHHHHhhcCCCCCCCCcccccccccCCCcccccceEEEEEecCcEEEEccCCeEEEEecCCCceEEEEEe
Q 011482          366 LPPSIYSALKAEFLKQFSGFPSAPGFSILDTCFNLSAYQEVNIPLVKMEFEGNAEMTVDVTGIVYFVKSDASQVCLALAS  445 (484)
Q Consensus       366 Lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~~~f~gg~~~~l~~~~~~~~~~~~~~~~Cl~~~~  445 (484)
                      ||+++|++|+++|.+++...+.......+++||+...  ...+|+|+|+|+ |+++.|++++|++..  ..+.+|+++.+
T Consensus       321 Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~--~~~~P~i~~~F~-Ga~~~l~~~~~~~~~--~~~~~Cl~~~~  395 (431)
T PLN03146        321 LPSDFYSELESAVEEAIGGERVSDPQGLLSLCYSSTS--DIKLPIITAHFT-GADVKLQPLNTFVKV--SEDLVCFAMIP  395 (431)
T ss_pred             cCHHHHHHHHHHHHHHhccccCCCCCCCCCccccCCC--CCCCCeEEEEEC-CCeeecCcceeEEEc--CCCcEEEEEec
Confidence            9999999999999998865443333334567997532  247999999995 799999999999876  34678999876


Q ss_pred             CCCCCCceEEchhhhcceEEEEECCCCEEEEecCCCCCC
Q 011482          446 LSYEDETGIIGNYQQKNQRVIYDTKNSQLGFAGEDCSSM  484 (484)
Q Consensus       446 ~~~~~~~~IlG~~fl~~~~vvfD~~~~~IGFa~~~C~~~  484 (484)
                      ..   +.||||+.|||++||+||++++|||||+.+|+++
T Consensus       396 ~~---~~~IlG~~~q~~~~vvyDl~~~~igFa~~~C~~~  431 (431)
T PLN03146        396 TS---SIAIFGNLAQMNFLVGYDLESKTVSFKPTDCTKM  431 (431)
T ss_pred             CC---CceEECeeeEeeEEEEEECCCCEEeeecCCcCcC
Confidence            43   4699999999999999999999999999999864

>KOG1339 consensus Aspartyl protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd05472 cnd41_like Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information
>cd05489 xylanase_inhibitor_I_like TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information
>cd05490 Cathepsin_D2 Cathepsin_D2, pepsin family of proteinases Back     alignment and domain information
>cd06096 Plasmepsin_5 Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite Back     alignment and domain information
>cd05478 pepsin_A Pepsin A, aspartic protease produced in gastric mucosa of mammals Back     alignment and domain information
>PTZ00165 aspartyl protease; Provisional Back     alignment and domain information
>cd05486 Cathespin_E Cathepsin E, non-lysosomal aspartic protease Back     alignment and domain information
>cd05477 gastricsin Gastricsins, asparate proteases produced in gastric mucosa Back     alignment and domain information
>cd05488 Proteinase_A_fungi Fungal Proteinase A , aspartic proteinase superfamily Back     alignment and domain information
>cd05485 Cathepsin_D_like Cathepsin_D_like, pepsin family of proteinases Back     alignment and domain information
>cd05487 renin_like Renin stimulates production of angiotensin and thus affects blood pressure Back     alignment and domain information
>cd06098 phytepsin Phytepsin, a plant homolog of mammalian lysosomal pepsins Back     alignment and domain information
>PTZ00147 plasmepsin-1; Provisional Back     alignment and domain information
>PTZ00013 plasmepsin 4 (PM4); Provisional Back     alignment and domain information
>cd05473 beta_secretase_like Beta-secretase, aspartic-acid protease important in the pathogenesis of Alzheimer's disease Back     alignment and domain information
>cd05475 nucellin_like Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information
>cd05476 pepsin_A_like_plant Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information
>cd06097 Aspergillopepsin_like Aspergillopepsin_like, aspartic proteases of fungal origin Back     alignment and domain information
>cd05474 SAP_like SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins Back     alignment and domain information
>PF00026 Asp: Eukaryotic aspartyl protease The Prosite entry also includes Pfam:PF00077 Back     alignment and domain information
>cd05471 pepsin_like Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>PF14543 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 3VLB_A 3VLA_A 3AUP_D 1T6G_A 1T6E_X 2B42_A Back     alignment and domain information
>PF14541 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 3HD8_A 1T6G_A 1T6E_X 2B42_A 3VLB_A 3VLA_A Back     alignment and domain information
>cd05470 pepsin_retropepsin_like Cellular and retroviral pepsin-like aspartate proteases Back     alignment and domain information
>cd05483 retropepsin_like_bacteria Bacterial aspartate proteases, retropepsin-like protease family Back     alignment and domain information
>TIGR02281 clan_AA_DTGA clan AA aspartic protease, TIGR02281 family Back     alignment and domain information
>PF13650 Asp_protease_2: Aspartyl protease Back     alignment and domain information
>cd05479 RP_DDI RP_DDI; retropepsin-like domain of DNA damage inducible protein Back     alignment and domain information
>cd05479 RP_DDI RP_DDI; retropepsin-like domain of DNA damage inducible protein Back     alignment and domain information
>cd05484 retropepsin_like_LTR_2 Retropepsins_like_LTR, pepsin-like aspartate proteases Back     alignment and domain information
>TIGR03698 clan_AA_DTGF clan AA aspartic protease, AF_0612 family Back     alignment and domain information
>cd06095 RP_RTVL_H_like Retropepsin of the RTVL_H family of human endogenous retrovirus-like elements Back     alignment and domain information
>PF13975 gag-asp_proteas: gag-polyprotein putative aspartyl protease Back     alignment and domain information
>PF11925 DUF3443: Protein of unknown function (DUF3443); InterPro: IPR021847 This family of proteins are functionally uncharacterised Back     alignment and domain information
>PF08284 RVP_2: Retroviral aspartyl protease; InterPro: IPR013242 This region defines single domain aspartyl proteases from retroviruses, retrotransposons, and badnaviruses (plant dsDNA viruses) Back     alignment and domain information
>PF00077 RVP: Retroviral aspartyl protease The Prosite entry also includes Pfam:PF00026; InterPro: IPR018061 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>COG3577 Predicted aspartyl protease [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query484
3vlb_A413 Crystal Structure Of Xeg-Edgp Length = 413 6e-10
3vla_A413 Crystal Structure Of Edgp Length = 413 7e-10
3aup_A403 Crystal Structure Of Basic 7s Globulin From Soybean 2e-06
2jxr_A329 Structure Of Yeast Proteinase A Length = 329 8e-05
1dp5_A329 The Structure Of Proteinase A Complexed With A Ia3 9e-05
1g0v_A329 The Structure Of Proteinase A Complexed With A Ia3 4e-04
>pdb|3VLB|A Chain A, Crystal Structure Of Xeg-Edgp Length = 413 Back     alignment and structure 
Iteration: 1

 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 96/401 (23%), Positives = 156/401 (38%), Gaps = 76/401 (18%)
Query: 132 TLNYIATIE----LGGRNMTVIVDTGSDLTWVQCQPCKSCYNQQDPVFDPSISPSYKKVL 187
           TL Y+ TI     L   N+  +VD G    WV C                 +S +Y+ V 
Sbjct: 19  TLQYVTTINQRTPLVSENL--VVDLGGRFLWVDCD-------------QNYVSSTYRPVR 63
Query: 188 CNSSTCH-ALEFATGNSGVCSSSSPPDCNY----------FVSYGDGSYTXXXXXXXXXX 236
           C +S C  +   A G+   C +   P CN            ++   G             
Sbjct: 64  CRTSQCSLSGSIACGD---CFNGPRPGCNNNTCGVFPENPVINTATGGEVAEDVVSVEST 120
Query: 237 XXKAS-----VNDFIFGCGRNN--KGLFGGVSGLMGLGRSDLSLVSQTSEIFG--GLFSY 287
              +S     V  FIF C   +  + L  GV G+ GLGR+ ++L SQ +  F     F+ 
Sbjct: 121 DGSSSGRVVTVPRFIFSCAPTSLLQNLASGVVGMAGLGRTRIALPSQFASAFSFKRKFAM 180
Query: 288 CLPSTQDAGASGSLILGGNS------SVFKNSTPITYTNMIPNP----------QLATFY 331
           CL     + +S S+I+ GN       ++  +   +TYT ++ NP          + +  Y
Sbjct: 181 CL---SGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEPSVEY 237
Query: 332 ILNLTGISIGGK-------QLQASGFAKGGILIDSGTVITRLPPSIYSALKAEFLKQFSG 384
            + +  I I  K        L  S    GG  I +    T L  SIY A+   F+K+ + 
Sbjct: 238 FIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAA 297
Query: 385 --FPSAPGFSILDTCFN----LSAYQEVNIPLVKMEFEGNAEMTVDVTGIVYFVKSDASQ 438
                    +    CF+    LS     ++P + +  +  + +   +TG    V  + + 
Sbjct: 298 RNITRVASVAPFGACFSTDNILSTRLGPSVPSIDLVLQSES-VVWTITGSNSMVYINDNV 356
Query: 439 VCLALASLSYEDETGI-IGNYQQKNQRVIYDTKNSQLGFAG 478
           VCL +        T I IG +Q ++  V +D   S++GF+G
Sbjct: 357 VCLGVVDGGSNLRTSIVIGGHQLEDNLVQFDLATSRVGFSG 397
>pdb|3VLA|A Chain A, Crystal Structure Of Edgp Length = 413 Back     alignment and structure
>pdb|3AUP|A Chain A, Crystal Structure Of Basic 7s Globulin From Soybean Length = 403 Back     alignment and structure
>pdb|2JXR|A Chain A, Structure Of Yeast Proteinase A Length = 329 Back     alignment and structure
>pdb|1DP5|A Chain A, The Structure Of Proteinase A Complexed With A Ia3 Mutant Inhibitor Length = 329 Back     alignment and structure
>pdb|1G0V|A Chain A, The Structure Of Proteinase A Complexed With A Ia3 Mutant, Mvv Length = 329 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query484
3aup_A403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 1e-92
1t6e_X381 Xylanase inhibitor; two beta-barrel domain structu 7e-85
3vla_A413 EDGP; extracellular, inhibitor, plant protein; HET 4e-81
3pvk_A342 Candidapepsin-2; hydrolase; 1.27A {Candida albican 4e-29
2qzx_A342 Candidapepsin-5; aspartic proteinase, aspartyl pro 4e-24
1ibq_A325 Aspergillopepsin; aspartic proteinase, hydrolase; 8e-24
3c9x_A329 Trichoderma reesei aspartic protease; aspartic pro 4e-23
1j71_A334 Candidapepsin, aspartic proteinase; candida tropic 8e-23
2ewy_A383 Beta-secretase 2; BACE2, aspartic protease, hydrol 1e-22
3lpj_A455 Beta-secretase 1; alzheimer'S, aspartyl protease, 3e-22
3fv3_A339 SAPP1P-secreted aspartic protease 1; secreted aspa 1e-21
1mpp_A361 Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu 5e-21
1oew_A329 Endothiapepsin; hydrolase, aspartic proteinase mec 7e-21
2qp8_A395 Beta-secretase 1; BACE1, protease, alternative spl 1e-20
1izd_A323 Aspartic proteinase; sugar binding, acid protease, 2e-20
3psg_A370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 4e-20
1bxo_A323 Protein (penicillopepsin); hydrolase, phosphonate 4e-20
1yg9_A330 Aspartic protease BLA G 2; allegren, hydrolase, al 5e-20
1tzs_A351 Cathepsin E; hydrolase, aspartic protease, activat 1e-19
1dpj_A329 Proteinase A; proteinase A, hydrolase-hydrolase in 4e-19
2apr_A325 Rhizopuspepsin; hydrolase (aspartic proteinase); 1 4e-19
1am5_A324 Pepsin, acid proteinase; aspartyl protease, hydrol 6e-19
1b5f_A239 Protein (cardosin A); hydrolase, aspartic proteina 2e-18
1wkr_A340 Polyporopepsin; hydrolase, hydrolase-hydrolase inh 2e-18
2x0b_A383 Renin; hydrolase-hormone complex, hydrolase hormon 3e-18
1htr_B329 Gastricsin; aspartyl protease; 1.62A {Homo sapiens 5e-18
1qdm_A478 Prophytepsin; aspartic proteinases, saposin-like d 7e-18
3cms_A323 Chymosin B; hydrolase, acid proteinase; 2.00A {Bos 3e-17
3k1w_A341 Renin; protease, alternative splicing, aspartyl pr 1e-16
2bju_A453 Plasmepsin II; aspartic proteinase, drug design, m 6e-16
3qvc_A451 Histo-aspartic protease; HAP, plasmepsin, zymogen, 2e-14
1miq_A375 Plasmepsin; aspartic proteinase zymogen, domain op 8e-14
1lya_B241 Cathepsin D; lysosomal aspartic protease; HET: NAG 6e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-07
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Length = 403 Back     alignment and structure
 Score =  286 bits (732), Expect = 1e-92
 Identities = 72/393 (18%), Positives = 127/393 (32%), Gaps = 46/393 (11%)

Query: 122 IPLTSGIRLQTLNYIATIELG--GRNMTVIVDTGSDLTWVQCQPCKSCYNQQDPVFDPSI 179
           +P+ +     T  + A ++       + V+VD   +  WV C+   S    Q P    + 
Sbjct: 12  LPVQNDG--STGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQYSSKTYQAPFCHSTQ 69

Query: 180 SPSYKKVLCNSSTCHALEFATGNSGVCSSSSPPDCNYFVSYGDGSYTRGELGREHLGLG- 238
                   C S            +               +        GELG + L +  
Sbjct: 70  CSRANTHQCLSCPA---------ASRPGCHKNTCGLMSTNPITQQTGLGELGEDVLAIHA 120

Query: 239 ----------KASVNDFIFGCGRN---NKGLFGGVSGLMGLGRSDLSLVSQTSEIFG--G 283
                       +V  F+F C  +    KGL     G+ GLG + +SL +Q +  FG   
Sbjct: 121 TQGSTQQLGPLVTVPQFLFSCAPSFLVQKGLPRNTQGVAGLGHAPISLPNQLASHFGLQR 180

Query: 284 LFSYCLPSTQDAGASGSLILGGNSSVFKNSTPITYTNMI----PNPQLATFYILNLTGIS 339
            F+ CL     +   G++I G   +  +        + +        L   Y + +  I 
Sbjct: 181 QFTTCLSRYPTSK--GAIIFGDAPNNMRQFQNQDIFHDLAFTPLTITLQGEYNVRVNSIR 238

Query: 340 IGGKQLQA--------SGFAKGGILIDSGTVITRLPPSIYSALKAEFLKQFSGFPSAPGF 391
           I    +           G   GG +I + T    L  S+Y A    F +Q          
Sbjct: 239 INQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQAQVKSV 298

Query: 392 SILDTCFNLSAYQEVNIPLVKMEFEGNAEMTVDVTGIVYFVKSDASQVCLALASLSYEDE 451
           +    CFN +         + M+        +   G    V++     CL + +   +  
Sbjct: 299 APFGLCFNSNKINAYPSVDLVMDKPNGPVWRIS--GEDLMVQAQPGVTCLGVMNGGMQPR 356

Query: 452 TG-IIGNYQQKNQRVIYDTKNSQLGFAGEDCSS 483
               +G  Q +   V++D   S++GF+     S
Sbjct: 357 AEITLGARQLEENLVVFDLARSRVGFSTSSLHS 389
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Length = 381 Back     alignment and structure
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Length = 413 Back     alignment and structure
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Length = 342 Back     alignment and structure
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Length = 342 Back     alignment and structure
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Length = 325 Back     alignment and structure
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Length = 329 Back     alignment and structure
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Length = 334 Back     alignment and structure
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Length = 383 Back     alignment and structure
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Length = 455 Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} PDB: 3tne_A* Length = 339 Back     alignment and structure
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Length = 361 Back     alignment and structure
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Length = 329 Back     alignment and structure
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Length = 395 Back     alignment and structure
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Length = 323 Back     alignment and structure
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Length = 370 Back     alignment and structure
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Length = 323 Back     alignment and structure
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Length = 330 Back     alignment and structure
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Length = 351 Back     alignment and structure
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Length = 329 Back     alignment and structure
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Length = 325 Back     alignment and structure
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Length = 324 Back     alignment and structure
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Length = 239 Back     alignment and structure
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 Length = 340 Back     alignment and structure
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Length = 383 Back     alignment and structure
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Length = 329 Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Length = 478 Back     alignment and structure
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Length = 323 Back     alignment and structure
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Length = 341 Back     alignment and structure
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Length = 453 Back     alignment and structure
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Length = 451 Back     alignment and structure
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Length = 375 Back     alignment and structure
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B* Length = 241 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query484
3vla_A413 EDGP; extracellular, inhibitor, plant protein; HET 100.0
3aup_A403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 100.0
3psg_A370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 100.0
1tzs_A351 Cathepsin E; hydrolase, aspartic protease, activat 100.0
3c9x_A329 Trichoderma reesei aspartic protease; aspartic pro 100.0
2apr_A325 Rhizopuspepsin; hydrolase (aspartic proteinase); 1 100.0
1oew_A329 Endothiapepsin; hydrolase, aspartic proteinase mec 100.0
2x0b_A383 Renin; hydrolase-hormone complex, hydrolase hormon 100.0
1dpj_A329 Proteinase A; proteinase A, hydrolase-hydrolase in 100.0
1ibq_A325 Aspergillopepsin; aspartic proteinase, hydrolase; 100.0
2qzx_A342 Candidapepsin-5; aspartic proteinase, aspartyl pro 100.0
1t6e_X381 Xylanase inhibitor; two beta-barrel domain structu 100.0
1j71_A334 Candidapepsin, aspartic proteinase; candida tropic 100.0
1miq_A375 Plasmepsin; aspartic proteinase zymogen, domain op 100.0
3cms_A323 Chymosin B; hydrolase, acid proteinase; 2.00A {Bos 100.0
1am5_A324 Pepsin, acid proteinase; aspartyl protease, hydrol 100.0
1mpp_A361 Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu 100.0
1yg9_A330 Aspartic protease BLA G 2; allegren, hydrolase, al 100.0
1izd_A323 Aspartic proteinase; sugar binding, acid protease, 100.0
1htr_B329 Gastricsin; aspartyl protease; 1.62A {Homo sapiens 100.0
3fv3_A339 SAPP1P-secreted aspartic protease 1; secreted aspa 100.0
4aa9_A320 Chymosin; hydrolase, aspartic peptidase, rennet; H 100.0
1qdm_A478 Prophytepsin; aspartic proteinases, saposin-like d 100.0
1bxo_A323 Protein (penicillopepsin); hydrolase, phosphonate 100.0
3k1w_A341 Renin; protease, alternative splicing, aspartyl pr 100.0
2bju_A453 Plasmepsin II; aspartic proteinase, drug design, m 100.0
3pvk_A342 Candidapepsin-2; hydrolase; 1.27A {Candida albican 100.0
3qvc_A451 Histo-aspartic protease; HAP, plasmepsin, zymogen, 100.0
2ewy_A383 Beta-secretase 2; BACE2, aspartic protease, hydrol 100.0
2qp8_A395 Beta-secretase 1; BACE1, protease, alternative spl 100.0
1wkr_A340 Polyporopepsin; hydrolase, hydrolase-hydrolase inh 100.0
3lpj_A455 Beta-secretase 1; alzheimer'S, aspartyl protease, 100.0
3vf3_A402 Beta-secretase 1; structure-based drug design, hyd 100.0
1b5f_A239 Protein (cardosin A); hydrolase, aspartic proteina 100.0
1lya_B241 Cathepsin D; lysosomal aspartic protease; HET: NAG 100.0
1lya_A97 Cathepsin D; lysosomal aspartic protease; HET: NAG 99.8
1b5f_B87 Protein (cardosin A); hydrolase, aspartic proteina 99.71
2i1a_A148 DNA damage-inducible protein DDI1; acid protease f 89.85
3s8i_A148 Protein DDI1 homolog 1; protease, structural genom 89.57
1fmb_A104 EIAV protease; hydrolase (acid proteinase), RNA-di 86.49
2hs1_A99 HIV-1 protease; ultra-high resolution active site 85.84
3ec0_A99 Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1 82.23
2i1a_A148 DNA damage-inducible protein DDI1; acid protease f 80.9
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Back     alignment and structure
Probab=100.00  E-value=4.2e-60  Score=488.96  Aligned_cols=341  Identities=25%  Similarity=0.471  Sum_probs=274.6

Q ss_pred             CCccccccccCccccceeEEEEEEEcC--EEEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCcceecCCCcccc
Q 011482          117 VSNTEIPLTSGIRLQTLNYIATIELGG--RNMTVIVDTGSDLTWVQCQPCKSCYNQQDPVFDPSISPSYKKVLCNSSTCH  194 (484)
Q Consensus       117 ~~~~~~pl~~~~~~~~~~Y~~~v~iGt--q~~~vivDTGS~~~Wv~~~~C~~C~~~~~~~ydps~Sst~~~v~C~s~~C~  194 (484)
                      ++...+|+....  .+++|+++|.|||  |+|.|+|||||+++||+|.+|             .+|+||+.++|.++.|.
T Consensus         6 ~~~~~~pv~~d~--~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~~c-------------~~Sst~~~v~C~s~~C~   70 (413)
T 3vla_A            6 PSALVVPVKKDA--STLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQN-------------YVSSTYRPVRCRTSQCS   70 (413)
T ss_dssp             CSEEEEEEEECT--TTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSS-------------CCCTTCEECBTTSHHHH
T ss_pred             CccEEEEeeecC--CCCeEEEEEEcCCCCcceEEEEeCCChhhhcccCCC-------------CCCCCcCccCCCccccc
Confidence            345778888764  5679999999999  999999999999999999976             37999999999999998


Q ss_pred             cccccCC------CCCCCCCCCCCCCeeeEEc-CCCceEeEEEEEEEEEecc---------ccccceEEEEEecc--CCC
Q 011482          195 ALEFATG------NSGVCSSSSPPDCNYFVSY-GDGSYTRGELGREHLGLGK---------ASVNDFIFGCGRNN--KGL  256 (484)
Q Consensus       195 ~~~~~~~------~~~~C~~~~~~~C~~~~~Y-gdgs~~~G~~~~Dtltlg~---------~~~~~~~fG~~~~~--~~~  256 (484)
                      .......      ....|.   ++.|.|.+.| +||+.+.|++++|+|+|++         ..++++.|||++..  .+.
T Consensus        71 ~~~~~~~~~c~s~~~~~c~---~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g~  147 (413)
T 3vla_A           71 LSGSIACGDCFNGPRPGCN---NNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNL  147 (413)
T ss_dssp             HTTCCEEECCSSCCBTTBC---SSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTTS
T ss_pred             ccccCCCcccccCCCCCCC---CCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccCc
Confidence            7643210      011233   2469999999 5888889999999999962         57889999999986  456


Q ss_pred             CCCcCeeeecCCCCCccccchhhcc--CCeeEEeeCCCCCCCCcceEEecCCCccc----cCCCC-eEEeeCcCCCCC--
Q 011482          257 FGGVSGLMGLGRSDLSLVSQTSEIF--GGLFSYCLPSTQDAGASGSLILGGNSSVF----KNSTP-ITYTNMIPNPQL--  327 (484)
Q Consensus       257 ~~~~~GIlGLg~~~~Sl~~ql~~~~--~~~FS~~L~~~~~~~~~G~L~fGg~~~~~----~~~~~-~~~~pl~~~~~~--  327 (484)
                      +..++||||||++++|+++|+....  .++|||||++.  ....|.|+||+.+..+    +..++ ++|+|++.++..  
T Consensus       148 ~~~~dGIlGLg~~~lSl~sql~~~~~i~~~FS~cL~~~--~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~  225 (413)
T 3vla_A          148 ASGVVGMAGLGRTRIALPSQFASAFSFKRKFAMCLSGS--TSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTS  225 (413)
T ss_dssp             CTTCCEEEECSSSSSSHHHHHHHHHTCCSEEEEECCSC--SSSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCS
T ss_pred             ccccccccccCCCCcchHHHHhhhcCCCceEEEeCCCC--CCCceEEEECCCcccccccccccCCceeEeecccCCcccc
Confidence            6689999999999999999998653  48999999974  3468999999954432    11367 999999987533  


Q ss_pred             --------CceEEEEEeEEEEcCEEeec--CCC-----CCCcEEEcccccccccCHHHHHHHHHHHHHhhc--CCCCCCC
Q 011482          328 --------ATFYILNLTGISIGGKQLQA--SGF-----AKGGILIDSGTVITRLPPSIYSALKAEFLKQFS--GFPSAPG  390 (484)
Q Consensus       328 --------~~~y~v~l~~i~vg~~~i~~--~~~-----~~~~~iiDSGTt~t~Lp~~~~~~l~~~~~~~~~--~~~~~~~  390 (484)
                              +.+|+|+|++|+||++.+..  ..|     +.+++||||||++|+||+++|++|+++|.+++.  .++...+
T Consensus       226 ~~~~~~~~~~~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~~~~  305 (413)
T 3vla_A          226 ATSTQGEPSVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRVAS  305 (413)
T ss_dssp             SSCCTTCCCCSCEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCEECC
T ss_pred             ccccccCCCceEEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccCCCcCCC
Confidence                    26999999999999998653  233     246899999999999999999999999998875  4443333


Q ss_pred             CcccccccccCCCc----ccccceEEEEEec-CcEEEEccCCeEEEEecCCCceEEEEEeCCC-CCCceEEchhhhcceE
Q 011482          391 FSILDTCFNLSAYQ----EVNIPLVKMEFEG-NAEMTVDVTGIVYFVKSDASQVCLALASLSY-EDETGIIGNYQQKNQR  464 (484)
Q Consensus       391 ~~~~~~C~~~~~~~----~~~~P~i~~~f~g-g~~~~l~~~~~~~~~~~~~~~~Cl~~~~~~~-~~~~~IlG~~fl~~~~  464 (484)
                      ...++.||+.++..    ...+|+|+|+|+| +++|+|++++|+++.+  ++.+|++|+.... ....||||+.|||++|
T Consensus       306 ~~~~~~C~~~~~~~~~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~--~~~~Cl~~~~~~~~~~~~~IlGd~fl~~~~  383 (413)
T 3vla_A          306 VAPFGACFSTDNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYIN--DNVVCLGVVDGGSNLRTSIVIGGHQLEDNL  383 (413)
T ss_dssp             CTTCSCEEECTTCCEETTEECCCCEEEECSSTTCEEEECHHHHEEEEE--TTEEEECEEEEESSCSSSEEECHHHHTTEE
T ss_pred             CCCCcceeccCCccccccccCCCcEEEEEcCCcEEEEeCccceEEEeC--CCcEEEEEEecCCCcccceeEehhhhcCeE
Confidence            34456799876432    2479999999975 4899999999998864  4678998887543 2357999999999999


Q ss_pred             EEEECCCCEEEEecC
Q 011482          465 VIYDTKNSQLGFAGE  479 (484)
Q Consensus       465 vvfD~~~~~IGFa~~  479 (484)
                      +|||++++|||||++
T Consensus       384 vvfD~~~~riGfa~~  398 (413)
T 3vla_A          384 VQFDLATSRVGFSGT  398 (413)
T ss_dssp             EEEETTTTEEEEEEE
T ss_pred             EEEECCCCEEEEEEe
Confidence            999999999999984
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Back     alignment and structure
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Back     alignment and structure
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Back     alignment and structure
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Back     alignment and structure
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Back     alignment and structure
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Back     alignment and structure
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Back     alignment and structure
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Back     alignment and structure
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Back     alignment and structure
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Back     alignment and structure
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Back     alignment and structure
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Back     alignment and structure
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Back     alignment and structure
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Back     alignment and structure
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Back     alignment and structure
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Back     alignment and structure
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Back     alignment and structure
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Back     alignment and structure
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A* Back     alignment and structure
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Back     alignment and structure
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Back     alignment and structure
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Back     alignment and structure
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Back     alignment and structure
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Back     alignment and structure
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Back     alignment and structure
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Back     alignment and structure
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Back     alignment and structure
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 Back     alignment and structure
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Back     alignment and structure
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ... Back     alignment and structure
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B* Back     alignment and structure
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A* Back     alignment and structure
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae} Back     alignment and structure
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens} Back     alignment and structure
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A* Back     alignment and structure
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ... Back     alignment and structure
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ... Back     alignment and structure
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 484
d1t6ex_381 b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Tr 6e-52
d1eaga_342 b.50.1.2 (A:) Acid protease {Yeast (Candida albica 1e-37
d1dpja_329 b.50.1.2 (A:) Acid protease {Baker's yeast (Saccha 5e-37
d1izea_323 b.50.1.2 (A:) Acid protease {Fungus (Aspergillus o 1e-35
d1bxoa_323 b.50.1.2 (A:) Acid protease {Fungus (Penicillium j 4e-35
d2apra_325 b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus 1e-34
d1oewa_330 b.50.1.2 (A:) Endothiapepsin {Chestnut blight fung 5e-34
d3psga_370 b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxI 5e-34
d2qp8a1387 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Hum 6e-34
g1htr.1372 b.50.1.2 (P:,B:) Pepsin(ogen) {Human (Homo sapiens 2e-33
g1lya.1338 b.50.1.2 (A:,B:) Cathepsin D {Human (Homo sapiens) 2e-33
d3cmsa_323 b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos 3e-33
d1qdma2337 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase 4e-33
d1wkra_340 b.50.1.2 (A:) Acid protease {Irpex lacteus (Polypo 9e-32
d1am5a_324 b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus mo 3e-31
d1mppa_357 b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840] 8e-31
d1j71a_334 b.50.1.2 (A:) Acid protease {Yeast (Candida tropic 3e-30
d1miqa_373 b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading e 6e-30
g1b5f.1326 b.50.1.2 (A:,B:) Plant acid proteinase, phytepsin 2e-29
d2bjua1329 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrad 1e-28
d1smra_335 b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mu 2e-28
d1hrna_337 b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Ho 1e-26
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Length = 381 Back     information, alignment and structure

class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Xylanase inhibitor TAXI-I
species: Wheat (Triticum aestivum) [TaxId: 4565]

 Score =  178 bits (451), Expect = 6e-52
 Identities = 57/376 (15%), Positives = 116/376 (30%), Gaps = 48/376 (12%)

Query: 132 TLNYIATIELGGRNMTVIVDTGSDLTWVQCQPCKSCYNQQDPVFDPSISPSYKKVLCNSS 191
           T  Y      G    ++++D    L W  C   +             ++ +Y    C + 
Sbjct: 13  TSLYTIPFHDGA---SLVLDVAGPLVWSTCDGGQPPAEIPCSSPTCLLANAYPAPGCPAP 69

Query: 192 TCHALEFATGNSGVCSSSSPPDCNYFVSYGDGSYTRGELGREHLGLG--------KASVN 243
           +C                  P   Y  +   G+   G L                     
Sbjct: 70  SCG-----------SDKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNV 118

Query: 244 DFIFGCGRNN--KGLFGGVSGLMGLGRSDLSLVSQTSEIFGGLFSYCLPSTQDAGASGSL 301
             +  C  +     L  G +G+ GL  S L+L +Q +        + L            
Sbjct: 119 GVLAACAPSKLLASLPRGSTGVAGLANSGLALPAQVASAQKVANRFLLCLPTGGPGVAIF 178

Query: 302 ILGGNSSVFKNSTPITYTNMIPNPQLATFYILNLTGISIGGKQLQ--ASGFAKGGILIDS 359
             G      + +  + YT ++     +  + ++   I +G  ++       A GG+++ +
Sbjct: 179 GGGPVPWP-QFTQSMPYTPLVTKGG-SPAHYISARSIVVGDTRVPVPEGALATGGVMLST 236

Query: 360 GTVITRLPPSIYSALKAEFLKQFSG--------FPSAPGFSILDTCFNLSAYQ----EVN 407
                 L P +Y  L   F K  +           +    +    C++            
Sbjct: 237 RLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTLGNNLGGYA 296

Query: 408 IPLVKMEFEGNAEMTVDVTGIVYFVKSDASQVCLALASLSYED------ETGIIGNYQQK 461
           +P V++  +G ++ T  +TG    V       C+A   +             I+G  Q +
Sbjct: 297 VPNVQLGLDGGSDWT--MTGKNSMVDVKQGTACVAFVEMKGVAAGDGRAPAVILGGAQME 354

Query: 462 NQRVIYDTKNSQLGFA 477
           +  + +D +  +LGF+
Sbjct: 355 DFVLDFDMEKKRLGFS 370
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Length = 342 Back     information, alignment and structure
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Length = 329 Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Length = 323 Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Length = 323 Back     information, alignment and structure
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Length = 325 Back     information, alignment and structure
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Length = 370 Back     information, alignment and structure
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Length = 387 Back     information, alignment and structure
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Length = 323 Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 337 Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Length = 340 Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Length = 324 Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Length = 357 Back     information, alignment and structure
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 334 Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Length = 373 Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Length = 329 Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Length = 335 Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query484
d3psga_370 Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} 100.0
g1htr.1372 Pepsin(ogen) {Human (Homo sapiens), progastricsin 100.0
d2apra_325 Acid protease {Bread mold (Rhizopus chinensis) [Ta 100.0
d1dpja_329 Acid protease {Baker's yeast (Saccharomyces cerevi 100.0
d1oewa_330 Endothiapepsin {Chestnut blight fungus (Endothia p 100.0
d1j71a_334 Acid protease {Yeast (Candida tropicalis) [TaxId: 100.0
d1smra_335 Chymosin (synonym: renin) {Mouse (Mus musculus) [T 100.0
d1miqa_373 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 100.0
d1bxoa_323 Acid protease {Fungus (Penicillium janthinellum), 100.0
d1izea_323 Acid protease {Fungus (Aspergillus oryzae) [TaxId: 100.0
d1am5a_324 Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 100.0
d1eaga_342 Acid protease {Yeast (Candida albicans) [TaxId: 54 100.0
d1hrna_337 Chymosin (synonym: renin) {Human (Homo sapiens) [T 100.0
d1mppa_357 Pepsin {Mucor pusillus [TaxId: 4840]} 100.0
d1qdma2337 Plant acid proteinase, phytepsin {Barley (Hordeum 100.0
g1lya.1338 Cathepsin D {Human (Homo sapiens) [TaxId: 9606]} 100.0
d2bjua1329 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 100.0
d1t6ex_381 Xylanase inhibitor TAXI-I {Wheat (Triticum aestivu 100.0
d2qp8a1387 beta-secretase (memapsin) {Human (Homo sapiens) [T 100.0
g1b5f.1326 Plant acid proteinase, phytepsin {Cynara carduncul 100.0
d3cmsa_323 Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId 100.0
d1wkra_340 Acid protease {Irpex lacteus (Polyporus tulipifera 100.0
d4fiva_113 Feline immunodeficiency virus (FIV) protease {Feli 83.32
d2nmza199 Human immunodeficiency virus type 1 protease {Huma 82.36
d2fmba_104 EIAV protease {Equine infectious anemia virus [Tax 80.93
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Pepsin(ogen)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=100.00  E-value=2.9e-54  Score=437.99  Aligned_cols=348  Identities=22%  Similarity=0.413  Sum_probs=273.6

Q ss_pred             eEEEEEeccCCCCCCCCchHHHHHHHhhhHHHHHHHHHHHhccccC--CcccCCccccccccCccccceeEEEEEEEcC-
Q 011482           67 ITLELKHKNYCSGKIVDWNEQQQNRLILDNLHVQYLQSRIKNMISG--NIKDVSNTEIPLTSGIRLQTLNYIATIELGG-  143 (484)
Q Consensus        67 ~~l~l~hr~~~s~~~~~~~~~~~~~~~~d~~r~~~l~~r~~~~~~~--~~~~~~~~~~pl~~~~~~~~~~Y~~~v~iGt-  143 (484)
                      +++||+|+.           .+++.++++..+.++++.|..+..+.  ..........||.+..+   .+|+++|.||| 
T Consensus         2 v~ipl~k~~-----------~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~n~~d---~~Y~~~i~iGtP   67 (370)
T d3psga_           2 VKVPLVRKK-----------SLRQNLIKDGKLKDFLKTHKHNPASKYFPEAAALIGDEPLENYLD---TEYFGTIGIGTP   67 (370)
T ss_dssp             EEEEEEECC-----------CHHHHHHHTTCHHHHHHHCCCCGGGGTCTTSCCSSCCCTTGGGTT---CCEEEEEEETTT
T ss_pred             EEEecccCc-----------cHHHHHHHcCcHHHHHHhcccchhhhhcccccCcccccccccccC---CEEEEEEEEcCC
Confidence            578888762           26777777777777776554322111  11123345578887654   46999999999 


Q ss_pred             -EEEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCcceecCCCcccccccccCCCCCCCCCCCCCCCeeeEEcCC
Q 011482          144 -RNMTVIVDTGSDLTWVQCQPCKSCYNQQDPVFDPSISPSYKKVLCNSSTCHALEFATGNSGVCSSSSPPDCNYFVSYGD  222 (484)
Q Consensus       144 -q~~~vivDTGS~~~Wv~~~~C~~C~~~~~~~ydps~Sst~~~v~C~s~~C~~~~~~~~~~~~C~~~~~~~C~~~~~Ygd  222 (484)
                       |++.|+|||||+++||+|.+|..|..+.++.|||++|+||+..                          .|.|.+.|++
T Consensus        68 ~Q~~~vi~DTGSs~~Wv~~~~C~~~~~~~~~~yd~~~Sst~~~~--------------------------~~~~~~~Yg~  121 (370)
T d3psga_          68 AQDFTVIFDTGSSNLWVPSVYCSSLACSDHNQFNPDDSSTFEAT--------------------------SQELSITYGT  121 (370)
T ss_dssp             TEEEEEEEETTCCCEEEEBTTCCSGGGTTSCCBCGGGCTTCEEE--------------------------EEEEEEESSS
T ss_pred             CeEEEEEEeCCCCCeEEECccCCCcccccccccCCCcccccccC--------------------------CCcEEEEeCC
Confidence             9999999999999999999999999999999999999999853                          2699999999


Q ss_pred             CceEeEEEEEEEEEeccccccceEEEEEeccCCCC---CCcCeeeecCCCCCc------cccchhhc---cCCeeEEeeC
Q 011482          223 GSYTRGELGREHLGLGKASVNDFIFGCGRNNKGLF---GGVSGLMGLGRSDLS------LVSQTSEI---FGGLFSYCLP  290 (484)
Q Consensus       223 gs~~~G~~~~Dtltlg~~~~~~~~fG~~~~~~~~~---~~~~GIlGLg~~~~S------l~~ql~~~---~~~~FS~~L~  290 (484)
                      |+. .|.++.|++.+++..++++.|||++...+.+   ...+||+|||+...+      +..++...   ..++||+|+.
T Consensus       122 Gs~-~G~~~~d~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~Gi~gl~~~~~~~~~~~~~~~~l~~~~~i~~~~fs~~l~  200 (370)
T d3psga_         122 GSM-TGILGYDTVQVGGISDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSISASGATPVFDNLWDQGLVSQDLFSVYLS  200 (370)
T ss_dssp             CEE-EEEEEEEEEEETTEEEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEEC
T ss_pred             ceE-EEEEEEEEEeeeceeeeeeEEEEEeeccCceecccccccccccccCcccccCCCchhhhhhhhcccccceeEEEee
Confidence            986 8999999999999999999999999987743   367999999987654      22222221   2478999998


Q ss_pred             CCCCCCCcceEEecC-CCccccCCCCeEEeeCcCCCCCCceEEEEEeEEEEcCEEeecCCCCCCcEEEcccccccccCHH
Q 011482          291 STQDAGASGSLILGG-NSSVFKNSTPITYTNMIPNPQLATFYILNLTGISIGGKQLQASGFAKGGILIDSGTVITRLPPS  369 (484)
Q Consensus       291 ~~~~~~~~G~L~fGg-~~~~~~~~~~~~~~pl~~~~~~~~~y~v~l~~i~vg~~~i~~~~~~~~~~iiDSGTt~t~Lp~~  369 (484)
                      +.  ....|.|+||| ++.++.  ++++|+|+...    .+|.|.++++.++|+.+....  ...+||||||++++||++
T Consensus       201 ~~--~~~~g~l~~Gg~d~~~~~--~~l~~~p~~~~----~~w~v~~~~i~v~g~~~~~~~--~~~aiiDSGTs~~~lp~~  270 (370)
T d3psga_         201 SN--DDSGSVVLLGGIDSSYYT--GSLNWVPVSVE----GYWQITLDSITMDGETIACSG--GCQAIVDTGTSLLTGPTS  270 (370)
T ss_dssp             -------CEEEEETCCCGGGBS--SCCEEEECSEE----TTEEEEECEEESSSSEEECTT--CEEEEECTTCCSEEEEHH
T ss_pred             cC--CCCCceEecCCcCchhcc--cceeEEeeccc----ceEEEEEeeEEeCCeEEecCC--CccEEEecCCceEeCCHH
Confidence            64  44579999999 555554  89999999765    799999999999998866432  368999999999999999


Q ss_pred             HHHHHHHHHHHhhcCCCCCCCCcccccccccCCCcccccceEEEEEecCcEEEEccCCeEEEEecCCCceEE-EEEeCC-
Q 011482          370 IYSALKAEFLKQFSGFPSAPGFSILDTCFNLSAYQEVNIPLVKMEFEGNAEMTVDVTGIVYFVKSDASQVCL-ALASLS-  447 (484)
Q Consensus       370 ~~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~~~f~gg~~~~l~~~~~~~~~~~~~~~~Cl-~~~~~~-  447 (484)
                      +|++|+++|.+..    ...+.+.++ |++..     .+|+|+|+| ||+++.|++++|+++.    +..|+ +|.... 
T Consensus       271 ~~~~i~~~l~~~~----~~~~~~~~~-C~~~~-----~~P~l~f~f-~g~~~~l~~~~yi~~~----~~~c~~~~~~~~~  335 (370)
T d3psga_         271 AIANIQSDIGASE----NSDGEMVIS-CSSID-----SLPDIVFTI-DGVQYPLSPSAYILQD----DDSCTSGFEGMDV  335 (370)
T ss_dssp             HHHHHHHHTTCEE----CTTCCEECC-GGGGG-----GCCCEEEEE-TTEEEEECHHHHEEEC----SSCEEESEEEECC
T ss_pred             HHHHHHHHhCCee----ecCCcEEEe-ccccC-----CCceEEEEE-CCEEEEEChHHeEEEc----CCeEEEEEEEccc
Confidence            9999998876543    234556665 98876     799999999 7899999999999763    34475 454332 


Q ss_pred             --CCCCceEEchhhhcceEEEEECCCCEEEEecCC
Q 011482          448 --YEDETGIIGNYQQKNQRVIYDTKNSQLGFAGED  480 (484)
Q Consensus       448 --~~~~~~IlG~~fl~~~~vvfD~~~~~IGFa~~~  480 (484)
                        ...+.||||++|||++|+|||.+++||||||+.
T Consensus       336 ~~~~~~~~ILG~~flr~~y~vfD~~~~~IGfAp~a  370 (370)
T d3psga_         336 PTSSGELWILGDVFIRQYYTVFDRANNKVGLAPVA  370 (370)
T ss_dssp             CTTSCCEEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred             CCCCCCcEEECHHhhcCEEEEEECCCCEEEEEecC
Confidence              234679999999999999999999999999974
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Back     information, alignment and structure
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Back     information, alignment and structure
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Back     information, alignment and structure
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Back     information, alignment and structure
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Back     information, alignment and structure
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Back     information, alignment and structure
>d4fiva_ b.50.1.1 (A:) Feline immunodeficiency virus (FIV) protease {Feline immunodeficiency virus [TaxId: 11673]} Back     information, alignment and structure
>d2nmza1 b.50.1.1 (A:1-99) Human immunodeficiency virus type 1 protease {Human immunodeficiency virus type 1 [TaxId: 11676]} Back     information, alignment and structure
>d2fmba_ b.50.1.1 (A:) EIAV protease {Equine infectious anemia virus [TaxId: 11665]} Back     information, alignment and structure