Citrus Sinensis ID: 011505
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 484 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SEK2 | 497 | Hexokinase-1 OS=Nicotiana | N/A | no | 1.0 | 0.973 | 0.715 | 0.0 | |
| Q9SQ76 | 496 | Hexokinase-2 OS=Solanum t | N/A | no | 0.956 | 0.933 | 0.734 | 0.0 | |
| P93834 | 502 | Hexokinase-2 OS=Arabidops | yes | no | 1.0 | 0.964 | 0.675 | 0.0 | |
| Q42525 | 496 | Hexokinase-1 OS=Arabidops | no | no | 0.997 | 0.973 | 0.676 | 0.0 | |
| Q9SEK3 | 498 | Hexokinase-1 OS=Spinacia | N/A | no | 0.948 | 0.921 | 0.694 | 0.0 | |
| O64390 | 498 | Hexokinase-1 OS=Solanum t | N/A | no | 0.995 | 0.967 | 0.659 | 1e-180 | |
| Q2KNB9 | 494 | Hexokinase-2 OS=Oryza sat | yes | no | 0.954 | 0.935 | 0.652 | 1e-177 | |
| Q8LQ68 | 506 | Hexokinase-6 OS=Oryza sat | yes | no | 0.909 | 0.869 | 0.654 | 1e-171 | |
| Q2KNB7 | 502 | Hexokinase-9 OS=Oryza sat | no | no | 0.956 | 0.922 | 0.579 | 1e-164 | |
| Q5W676 | 507 | Hexokinase-5 OS=Oryza sat | no | no | 0.919 | 0.877 | 0.627 | 1e-162 |
| >sp|Q9SEK2|HXK1_TOBAC Hexokinase-1 OS=Nicotiana tabacum GN=HXK1 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 737 bits (1902), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/496 (71%), Positives = 413/496 (83%), Gaps = 12/496 (2%)
Query: 1 MGRVTVVVVCCAALAAGVAAAVVVCRRVKRGGKCGKANGIMKEFEEKCRTPAAKLKQVAD 60
M + TV A AA++V R+++ K +A I++EFEEKC TP AKLKQVAD
Sbjct: 1 MKKATVGAAVIGAATVCAVAALIVNHRMRKSSKWARAMAILREFEEKCGTPDAKLKQVAD 60
Query: 61 AMTVEMHAGLASEGGSKLKMIISYVDNLPTGDEKGTYYALDLGGTNFRVLRVHLGGKGVG 120
AMTVEMHAGLASEGGSKLKM+I+YVDNLPTGDE G +YALDLGGTNFRVLRV LGGK G
Sbjct: 61 AMTVEMHAGLASEGGSKLKMLITYVDNLPTGDEAGVFYALDLGGTNFRVLRVQLGGKDGG 120
Query: 121 LINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGFTFSFPV 180
+++QEFAE SIPP+LM GTS+ALFDYIAAELAKFV++E E+F+ PG+QRELGFTFSFPV
Sbjct: 121 IVHQEFAEASIPPNLMVGTSEALFDYIAAELAKFVNEEGEKFQQPPGKQRELGFTFSFPV 180
Query: 181 MQTSINTGTL------------VGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRY 228
MQTSIN+GT+ VG+DVV EL++AM ++G+DM VSALVNDTVGTLAGG+Y
Sbjct: 181 MQTSINSGTIMRWTKGFSIDDAVGQDVVGELAKAMKRKGVDMRVSALVNDTVGTLAGGKY 240
Query: 229 TNKDVVAAVILGTGSNAAYVERAQAIPKWHGVPSKSGEMVINMEWGDFRSSHLSLSEYDN 288
T+ DV AVILGTG+NAAYVER QAIPKWHG KSGEMVINMEWG+FRSSHL L++YD+
Sbjct: 241 THNDVAVAVILGTGTNAAYVERVQAIPKWHGPVPKSGEMVINMEWGNFRSSHLPLTQYDH 300
Query: 289 ALDAESLNPGEQIFEKMISGMYLGEIVRRVLLRMAQEAAFFGDTVPPKLEVPFALRTPDM 348
ALD SLNPG+QIFEKM SGMYLGEI+RRVLLR+A+EA FGD VPPKL+ PF LRTPDM
Sbjct: 301 ALDTNSLNPGDQIFEKMTSGMYLGEILRRVLLRVAEEAGIFGDEVPPKLKSPFVLRTPDM 360
Query: 349 SAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELCNIVATRGARLAAAGILGVLKK 408
SAMHHD SSDL+VV KLKDILEIS+TSL R+ ++ELCNIVATRGARLAAAG+LG+LKK
Sbjct: 361 SAMHHDASSDLRVVGDKLKDILEISNTSLKTRRLVIELCNIVATRGARLAAAGVLGILKK 420
Query: 409 MGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVIEHSNDGSGI 468
MGRD + G +KTV+AMDGGLYEHY EY CLENTL+ELLG+EL +IV EHSNDGSGI
Sbjct: 421 MGRDTPRQGGLEKTVVAMDGGLYEHYTEYRMCLENTLKELLGDELATSIVFEHSNDGSGI 480
Query: 469 GAALLAASHSKYLQDE 484
GAALLAAS+S YL+D+
Sbjct: 481 GAALLAASNSMYLEDK 496
|
Fructose and glucose phosphorylating enzyme. May be involved in the phosphorylation of glucose during the export from plastids to cytosol. Nicotiana tabacum (taxid: 4097) EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 1 |
| >sp|Q9SQ76|HXK2_SOLTU Hexokinase-2 OS=Solanum tuberosum GN=HXK2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 722 bits (1864), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/475 (73%), Positives = 404/475 (85%), Gaps = 12/475 (2%)
Query: 22 VVVCRRVKRGGKCGKANGIMKEFEEKCRTPAAKLKQVADAMTVEMHAGLASEGGSKLKMI 81
+++ R+ + K +A I+KEFEEKC TP KLKQVADAMTVEMHAGLASEGGSKLKM+
Sbjct: 22 LIMRHRMGKSSKWARARAILKEFEEKCATPDGKLKQVADAMTVEMHAGLASEGGSKLKML 81
Query: 82 ISYVDNLPTGDEKGTYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSD 141
ISYVDNLPTGDE G +YALDLGGTNFRVLRV LGGK G+I+QEFAE SIPP+LM GTS+
Sbjct: 82 ISYVDNLPTGDEGGVFYALDLGGTNFRVLRVQLGGKDGGIIHQEFAEASIPPNLMVGTSE 141
Query: 142 ALFDYIAAELAKFVSQESEEFKLSPGRQRELGFTFSFPVMQTSINTGTL----------- 190
ALFDYIAAELAKFV++E EEF PGRQRELGFTFSFP+MQTSIN+GTL
Sbjct: 142 ALFDYIAAELAKFVAEEGEEFHPPPGRQRELGFTFSFPIMQTSINSGTLIRWTKGFSIDD 201
Query: 191 -VGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRYTNKDVVAAVILGTGSNAAYVE 249
VG+DVV EL++AM K+ +DM VSALVNDTVGTLAGGR+TNKDV AVILGTG+NAAYVE
Sbjct: 202 TVGKDVVAELTKAMQKREIDMRVSALVNDTVGTLAGGRFTNKDVSIAVILGTGTNAAYVE 261
Query: 250 RAQAIPKWHGVPSKSGEMVINMEWGDFRSSHLSLSEYDNALDAESLNPGEQIFEKMISGM 309
RAQAIPKWHG KSGEMVINMEWG+FRSSHL L+EYD+A+D SLNPGEQIFEK+ SGM
Sbjct: 262 RAQAIPKWHGPLPKSGEMVINMEWGNFRSSHLPLTEYDHAMDTNSLNPGEQIFEKICSGM 321
Query: 310 YLGEIVRRVLLRMAQEAAFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDI 369
YLGEI+RRVLLRMA+EA FG+ VPPKL+ F LRTP+MSAMHHDTSSDL+VV KLKDI
Sbjct: 322 YLGEILRRVLLRMAEEAGIFGEEVPPKLKNSFILRTPEMSAMHHDTSSDLRVVGDKLKDI 381
Query: 370 LEISSTSLSMRKTIVELCNIVATRGARLAAAGILGVLKKMGRDAAKDGDKQKTVIAMDGG 429
LEIS++SL R+ +VELCNIVATRGARLAAAGILG++KKMG+D ++ +K V+AMDGG
Sbjct: 382 LEISNSSLKTRRLVVELCNIVATRGARLAAAGILGIIKKMGKDTPRESGPEKIVVAMDGG 441
Query: 430 LYEHYAEYSKCLENTLEELLGEELFKNIVIEHSNDGSGIGAALLAASHSKYLQDE 484
LYEHY EYSKCLENTL ELLG+E+ +IV +H+NDGSGIGAALLAAS+S Y++D+
Sbjct: 442 LYEHYTEYSKCLENTLVELLGKEMATSIVFKHANDGSGIGAALLAASNSVYVEDK 496
|
Fructose and glucose phosphorylating enzyme. May be involved in the phosphorylation of glucose during the export from plastids to cytosol. Seems neither to be involved in cell sugar sensing nor in carbohydrate metabolism in tuber. Solanum tuberosum (taxid: 4113) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 1 |
| >sp|P93834|HXK2_ARATH Hexokinase-2 OS=Arabidopsis thaliana GN=HXK2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 689 bits (1778), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/496 (67%), Positives = 408/496 (82%), Gaps = 12/496 (2%)
Query: 1 MGRVTVVVVCCAALAAGVAAAVVVCRRVKRGGKCGKANGIMKEFEEKCRTPAAKLKQVAD 60
MG+V V ++A AAA++V RR+K GK + I+K FEE C TP AKL+QVAD
Sbjct: 1 MGKVAVATTVVCSVAVCAAAALIVRRRMKSAGKWARVIEILKAFEEDCATPIAKLRQVAD 60
Query: 61 AMTVEMHAGLASEGGSKLKMIISYVDNLPTGDEKGTYYALDLGGTNFRVLRVHLGGKGVG 120
AMTVEMHAGLASEGGSKLKM+ISYVDNLP+GDE G +YALDLGGTNFRV+RV LGGK
Sbjct: 61 AMTVEMHAGLASEGGSKLKMLISYVDNLPSGDETGFFYALDLGGTNFRVMRVLLGGKHDR 120
Query: 121 LINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGFTFSFPV 180
++ +EF E SIPPHLMTG S LFD+I LAKFV+ E E+F L PGRQRELGFTFSFPV
Sbjct: 121 VVKREFKEESIPPHLMTGKSHELFDFIVDVLAKFVATEGEDFHLPPGRQRELGFTFSFPV 180
Query: 181 MQTSINTGTL------------VGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRY 228
Q S+++GTL V +DVV EL +AM + GLDM V+ALVNDT+GTLAGGRY
Sbjct: 181 KQLSLSSGTLINWTKGFSIDDTVDKDVVGELVKAMERVGLDMLVAALVNDTIGTLAGGRY 240
Query: 229 TNKDVVAAVILGTGSNAAYVERAQAIPKWHGVPSKSGEMVINMEWGDFRSSHLSLSEYDN 288
TN DVV AVILGTG+NAAYVERA AIPKWHG+ KSGEMVINMEWG+FRSSHL L+EYD+
Sbjct: 241 TNPDVVVAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNFRSSHLPLTEYDH 300
Query: 289 ALDAESLNPGEQIFEKMISGMYLGEIVRRVLLRMAQEAAFFGDTVPPKLEVPFALRTPDM 348
+LD +SLNPGEQI EK+ISGMYLGEI+RRVLL+MA+EAAFFGD VPPKL++PF +RTP+M
Sbjct: 301 SLDVDSLNPGEQILEKIISGMYLGEILRRVLLKMAEEAAFFGDIVPPKLKIPFIIRTPNM 360
Query: 349 SAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELCNIVATRGARLAAAGILGVLKK 408
SAMH DTS DLKVV +KLKDILE+ ++SL MRK ++ LCNI+A+RGARL+AAGI G+LKK
Sbjct: 361 SAMHSDTSPDLKVVGSKLKDILEVQTSSLKMRKVVISLCNIIASRGARLSAAGIYGILKK 420
Query: 409 MGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVIEHSNDGSGI 468
+GRDA KDG+ QK+VIAMDGGL+EHY ++S+ ++++L+ELLG+E+ +++ + SNDGSG+
Sbjct: 421 IGRDATKDGEAQKSVIAMDGGLFEHYTQFSESMKSSLKELLGDEVSESVEVILSNDGSGV 480
Query: 469 GAALLAASHSKYLQDE 484
GAALLAASHS+YL+ E
Sbjct: 481 GAALLAASHSQYLELE 496
|
Fructose and glucose phosphorylating enzyme. May be involved in the phosphorylation of glucose during the export from mitochondrion to cytosol. Acts as sugar sensor which may regulate sugar-dependent gene repression or activation. Mediates the effects of sugar on plant growth and development independently of its catalytic activity or the sugar metabolism. May regulate the execution of program cell death in plant cells. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 1 |
| >sp|Q42525|HXK1_ARATH Hexokinase-1 OS=Arabidopsis thaliana GN=HXK1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 688 bits (1775), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/495 (67%), Positives = 405/495 (81%), Gaps = 12/495 (2%)
Query: 1 MGRVTVVVVCCAALAAGVAAAVVVCRRVKRGGKCGKANGIMKEFEEKCRTPAAKLKQVAD 60
MG+V V A A +VV RR++ GK G+ I+K FEE C TP +KL+QVAD
Sbjct: 1 MGKVAVGATVVCTAAVCAVAVLVVRRRMQSSGKWGRVLAILKAFEEDCATPISKLRQVAD 60
Query: 61 AMTVEMHAGLASEGGSKLKMIISYVDNLPTGDEKGTYYALDLGGTNFRVLRVHLGGKGVG 120
AMTVEMHAGLAS+GGSKLKM+ISYVDNLP+GDEKG +YALDLGGTNFRV+RV LGGK
Sbjct: 61 AMTVEMHAGLASDGGSKLKMLISYVDNLPSGDEKGLFYALDLGGTNFRVMRVLLGGKQER 120
Query: 121 LINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGFTFSFPV 180
++ QEF EVSIPPHLMTG SD LF++IA LAKFV+ E E+F L GRQRELGFTFSFPV
Sbjct: 121 VVKQEFEEVSIPPHLMTGGSDELFNFIAEALAKFVATECEDFHLPEGRQRELGFTFSFPV 180
Query: 181 MQTSINTGTL------------VGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRY 228
QTS+++G+L VG+DVV L++A+ + GLDM ++ALVNDTVGTLAGGRY
Sbjct: 181 KQTSLSSGSLIKWTKGFSIEEAVGQDVVGALNKALERVGLDMRIAALVNDTVGTLAGGRY 240
Query: 229 TNKDVVAAVILGTGSNAAYVERAQAIPKWHGVPSKSGEMVINMEWGDFRSSHLSLSEYDN 288
N DVVAAVILGTG+NAAYVERA AIPKWHG+ KSGEMVINMEWG+FRSSHL L+E+D+
Sbjct: 241 YNPDVVAAVILGTGTNAAYVERATAIPKWHGLLPKSGEMVINMEWGNFRSSHLPLTEFDH 300
Query: 289 ALDAESLNPGEQIFEKMISGMYLGEIVRRVLLRMAQEAAFFGDTVPPKLEVPFALRTPDM 348
LD ESLNPGEQI EK+ISGMYLGEI+RRVLL+MA++AAFFGDTVP KL +PF +RTP M
Sbjct: 301 TLDFESLNPGEQILEKIISGMYLGEILRRVLLKMAEDAAFFGDTVPSKLRIPFIIRTPHM 360
Query: 349 SAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELCNIVATRGARLAAAGILGVLKK 408
SAMH+DTS DLK+V +K+KDILE+ +TSL MRK ++ LCNI+ATRGARL+AAGI G+LKK
Sbjct: 361 SAMHNDTSPDLKIVGSKIKDILEVPTTSLKMRKVVISLCNIIATRGARLSAAGIYGILKK 420
Query: 409 MGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVIEHSNDGSGI 468
+GRD KD + QK+VIAMDGGL+EHY ++S+C+E++L+ELLG+E ++ + HSNDGSGI
Sbjct: 421 LGRDTTKDEEVQKSVIAMDGGLFEHYTQFSECMESSLKELLGDEASGSVEVTHSNDGSGI 480
Query: 469 GAALLAASHSKYLQD 483
GAALLAASHS YL+D
Sbjct: 481 GAALLAASHSLYLED 495
|
Fructose and glucose phosphorylating enzyme. May be involved in the phosphorylation of glucose during the export from mitochondrion to cytosol. Acts as sugar sensor which may regulate sugar-dependent gene repression or activation. Mediates the effects of sugar on plant growth and development independently of its catalytic activity or the sugar metabolism. May regulate the execution of program cell death in plant cells. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 1 |
| >sp|Q9SEK3|HXK1_SPIOL Hexokinase-1 OS=Spinacia oleracea GN=HXK1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 677 bits (1747), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/471 (69%), Positives = 390/471 (82%), Gaps = 12/471 (2%)
Query: 26 RRVKRGGKCGKANGIMKEFEEKCRTPAAKLKQVADAMTVEMHAGLASEGGSKLKMIISYV 85
+R+K K G+ I+KE ++ C TP KL+QVADAMTVEMHAGLASEG SKLKM+ISYV
Sbjct: 26 QRMKSSSKWGRVMAILKELDDNCGTPLGKLRQVADAMTVEMHAGLASEGASKLKMLISYV 85
Query: 86 DNLPTGDEKGTYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFD 145
DNLPTGDE G +YALDLGGTNFRVLRV LGGK ++ QEF EVSIPP LM GTS+ LFD
Sbjct: 86 DNLPTGDEHGLFYALDLGGTNFRVLRVKLGGKEKRVVEQEFDEVSIPPELMVGTSEQLFD 145
Query: 146 YIAAELAKFVSQESEEFKLSPGRQRELGFTFSFPVMQTSINTGTL------------VGR 193
YIA LAKFV+ ESE P +QRELGFTFSFPV QTSI +GTL VG
Sbjct: 146 YIAEALAKFVATESEGLHPEPNKQRELGFTFSFPVKQTSIASGTLIRWTKGFNIEDTVGE 205
Query: 194 DVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRYTNKDVVAAVILGTGSNAAYVERAQA 253
DVV EL++AM ++G+DM V+ALVNDTVGTLAGGRY +DV+AAVILGTG+NAAYVERA A
Sbjct: 206 DVVAELTKAMLRKGVDMRVTALVNDTVGTLAGGRYYKEDVIAAVILGTGTNAAYVERASA 265
Query: 254 IPKWHGVPSKSGEMVINMEWGDFRSSHLSLSEYDNALDAESLNPGEQIFEKMISGMYLGE 313
I KWHG KSGEMVINMEWG+FRSS+L L+EYD ALD ESLNPGEQIFEKMISGMYLGE
Sbjct: 266 IHKWHGPLPKSGEMVINMEWGNFRSSYLPLTEYDIALDEESLNPGEQIFEKMISGMYLGE 325
Query: 314 IVRRVLLRMAQEAAFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEIS 373
IVRRVL RMA EA+ FGDTVP KL+ PF LRTPDMSAMHHDTS DLKVV +KLKD+L I
Sbjct: 326 IVRRVLYRMADEASLFGDTVPSKLKTPFILRTPDMSAMHHDTSPDLKVVASKLKDVLGIP 385
Query: 374 STSLSMRKTIVELCNIVATRGARLAAAGILGVLKKMGRDAAKDGDKQKTVIAMDGGLYEH 433
++SL +RK IV++C+++A+RGA ++AAGILG++KK+GRD K G+ QK+VIA+DGGL+EH
Sbjct: 386 NSSLKVRKIIVDVCDVIASRGACISAAGILGIIKKLGRDTLKQGENQKSVIALDGGLFEH 445
Query: 434 YAEYSKCLENTLEELLGEELFKNIVIEHSNDGSGIGAALLAASHSKYLQDE 484
YA++ +C+E++L+ELLG+E+ + IVIEHSNDGSGIGAALLAASHS+YL+++
Sbjct: 446 YAKFRECMEDSLKELLGDEVAETIVIEHSNDGSGIGAALLAASHSQYLEED 496
|
Fructose and glucose phosphorylating enzyme. May be involved in the phosphorylation of glucose during the export from plastids to cytosol. Seems not to be involved in cell sugar sensing. Spinacia oleracea (taxid: 3562) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 1 |
| >sp|O64390|HXK1_SOLTU Hexokinase-1 OS=Solanum tuberosum GN=HXK1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 632 bits (1629), Expect = e-180, Method: Compositional matrix adjust.
Identities = 329/499 (65%), Positives = 379/499 (75%), Gaps = 17/499 (3%)
Query: 1 MGRVTVVVVCCAALAAGVAAAVVVCRRVKRGGKCGKANGIMKEFEEKCRTPAAKLKQVAD 60
M +VTV A A AA++V R+++ K G+A I++EFEEKC+T AKLKQVAD
Sbjct: 1 MKKVTVGAAVVGAAAVCAVAALIVNHRMRKSSKWGRAMAILREFEEKCKTQDAKLKQVAD 60
Query: 61 AMTVEMHAGLASEGGSKLKMI--ISYVDNLPTGDEKGTYYALDLGGTNFRVLRVHLGGKG 118
AMTVEMHAGLASEGG + + +S + L + G +YALDLGGTNFRVLRV LGGK
Sbjct: 61 AMTVEMHAGLASEGGQSSRCLSPMSIISQLVM--KLGVFYALDLGGTNFRVLRVQLGGKD 118
Query: 119 VGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGFTFSF 178
G+I+QEFAE SIPP LM GTSDALFDYIAAELAKFV+ E E+F PG+QRELGF
Sbjct: 119 GGIIHQEFAEASIPPSLMVGTSDALFDYIAAELAKFVAAEEEKFHQPPGKQRELGFHLLI 178
Query: 179 PVMQTSINTGTL------------VGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGG 226
P N+GT+ VG+DVV EL++AM ++ LDM VSALVNDTVGTLAGG
Sbjct: 179 PSNADFNNSGTIMRWTKGFSIDDAVGQDVVGELTKAMKEKVLDMRVSALVNDTVGTLAGG 238
Query: 227 RYTNKDVVAAVILGTGSNAAYVERAQAIPKWHGVPSKSGEMVINMEWGDFRSSHLSLSEY 286
+YT KDV AVILGTG+NAAYVER QAIPKWHG KSGEMVINMEWG+FRSSHL L+EY
Sbjct: 239 KYTQKDVAVAVILGTGTNAAYVERVQAIPKWHGPVPKSGEMVINMEWGNFRSSHLPLTEY 298
Query: 287 DNALDAESLNPGEQIFEKMISGMYLGEIVRRVLLRMAQEA-AFFGDTVPPKLEVPFALRT 345
D+ALD ESLNP EQIFEKM SGMYLGEI+RRVL R+A+E AF L+ F LRT
Sbjct: 299 DHALDNESLNPAEQIFEKMTSGMYLGEILRRVLTRVAEEVLAFLAMRSLQSLKDSFVLRT 358
Query: 346 PDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELCNIVATRGARLAAAGILGV 405
PDMSAMHHDTS DLKVV KLKDILEIS+TSL RK ++ LCNIVATRGARL AAG+LG+
Sbjct: 359 PDMSAMHHDTSPDLKVVGEKLKDILEISNTSLKTRKLVLSLCNIVATRGARLDAAGVLGI 418
Query: 406 LKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVIEHSNDG 465
LKKMGRD K G ++TVIAMDGGLYEHY EY CLEN+L++LLGEEL +IV HSNDG
Sbjct: 419 LKKMGRDTPKQGGSERTVIAMDGGLYEHYTEYRMCLENSLKDLLGEELATSIVFVHSNDG 478
Query: 466 SGIGAALLAASHSKYLQDE 484
SGIGAALL ASHS YL+D+
Sbjct: 479 SGIGAALLRASHSMYLEDQ 497
|
Fructose and glucose phosphorylating enzyme. May be involved in the phosphorylation of glucose during the export from plastids to cytosol. Seems neither to be involved in cell sugar sensing nor in carbohydrate metabolism in tuber. Solanum tuberosum (taxid: 4113) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 1 |
| >sp|Q2KNB9|HXK2_ORYSJ Hexokinase-2 OS=Oryza sativa subsp. japonica GN=HXK2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 622 bits (1604), Expect = e-177, Method: Compositional matrix adjust.
Identities = 310/475 (65%), Positives = 387/475 (81%), Gaps = 13/475 (2%)
Query: 22 VVVCRRVKRGGKCGKANGIMKEFEEKCRTPAAKLKQVADAMTVEMHAGLASEGGSKLKMI 81
++V R+++ + G+A+ +++E EE+C P +L+QVADAM VEMHAGLASEGGSKLKMI
Sbjct: 19 LLVRRQLREAKRWGRADAVLRELEERCAAPPGRLRQVADAMAVEMHAGLASEGGSKLKMI 78
Query: 82 ISYVDNLPTGDEKGTYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSD 141
ISYVD LP+G+EKG +YALDLGGTNFRVLRV LGGK +I QE E+SIPPHLMTG S+
Sbjct: 79 ISYVDALPSGEEKGVFYALDLGGTNFRVLRVQLGGKEGRVIKQEHDEISIPPHLMTGGSN 138
Query: 142 ALFDYIAAELAKFVSQESEEFKLSPGRQRELGFTFSFPVMQTSINTGTL----------- 190
LFD+IA+ LAKFV+ E E+F L+ GRQRELGFTFSFPV QTSI +GTL
Sbjct: 139 ELFDFIASSLAKFVASEGEDFHLAEGRQRELGFTFSFPVKQTSIASGTLINWTKGFSIDE 198
Query: 191 -VGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRYTNKDVVAAVILGTGSNAAYVE 249
VG DVV EL++A+ +QGLDM V+AL+NDT+GTLAGGRY + DV+AAVILGTG+NAAYVE
Sbjct: 199 TVGEDVVTELTKALERQGLDMKVTALINDTIGTLAGGRYDDNDVIAAVILGTGTNAAYVE 258
Query: 250 RAQAIPKWHGVPSKSGEMVINMEWGDFRSSHLSLSEYDNALDAESLNPGEQIFEKMISGM 309
RA AIPKWH + KSG+MVINMEWG+FRSSHL L+E+D ALDAESLNPGEQ++EK+ISGM
Sbjct: 259 RANAIPKWHDLLPKSGDMVINMEWGNFRSSHLPLTEFDQALDAESLNPGEQVYEKLISGM 318
Query: 310 YLGEIVRRVLLRMAQEAAFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDI 369
YLGEIVRRVLL+MA+EA+ FGD VPPKL++PF +RTP MS MH D S DL+ V KLKDI
Sbjct: 319 YLGEIVRRVLLKMAEEASLFGDEVPPKLKIPFIIRTPYMSMMHCDRSPDLRTVGAKLKDI 378
Query: 370 LEISSTSLSMRKTIVELCNIVATRGARLAAAGILGVLKKMGRDAAKDGDKQKTVIAMDGG 429
L + +TSL R+ +V++C+IVA R A LAAAGI G+LKK+GRD + DKQ+TVIA+DGG
Sbjct: 379 LGVQNTSLKTRRLVVDVCDIVAKRAAHLAAAGIHGILKKLGRDVP-NTDKQRTVIAVDGG 437
Query: 430 LYEHYAEYSKCLENTLEELLGEELFKNIVIEHSNDGSGIGAALLAASHSKYLQDE 484
LYEHY +++C+E+TL ++LGE++ IVI+ + DGSGIGAALLAA+HS+Y + E
Sbjct: 438 LYEHYTIFAECVESTLRDMLGEDVSSTIVIKLAKDGSGIGAALLAAAHSQYREAE 492
|
Fructose and glucose phosphorylating enzyme. Oryza sativa subsp. japonica (taxid: 39947) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 1 |
| >sp|Q8LQ68|HXK6_ORYSJ Hexokinase-6 OS=Oryza sativa subsp. japonica GN=HXK6 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 600 bits (1547), Expect = e-171, Method: Compositional matrix adjust.
Identities = 297/454 (65%), Positives = 355/454 (78%), Gaps = 14/454 (3%)
Query: 41 MKEFEEKCRTPAAKLKQVADAMTVEMHAGLASEGGSKLKMIISYVDNLPTGDEKGTYYAL 100
++E E++ TP A L+ +ADAM EM GL ++ + LKM+ISYVDNLPTGDE G +YAL
Sbjct: 49 IEEVEQRFSTPTALLRGIADAMVEEMERGLRADPHAPLKMLISYVDNLPTGDEHGLFYAL 108
Query: 101 DLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESE 160
DLGGTNFRV+RV LGG+ +++Q++ EV+IPPHLM GTS LFD+IAAEL FV E E
Sbjct: 109 DLGGTNFRVIRVQLGGREKRVVSQQYEEVAIPPHLMVGTSMELFDFIAAELESFVKTEGE 168
Query: 161 EFKLSPGRQRELGFTFSFPVMQTSINTGTL------------VGRDVVEELSRAMAKQGL 208
+F L GRQRELGFTFSFPV QTSI++GTL VG DVV ELSRAM +QGL
Sbjct: 169 DFHLPEGRQRELGFTFSFPVHQTSISSGTLIKWTKGFSINGTVGEDVVAELSRAMERQGL 228
Query: 209 DMSVSALVNDTVGTLAGGRYTNKDVVAAVILGTGSNAAYVERAQAIPKWHGVPSKSGEMV 268
DM V+ALVNDTVGTLAGGRY + DV AAVILGTG+NAAYVE A AIPKW G+ +SG MV
Sbjct: 229 DMKVTALVNDTVGTLAGGRYVDNDVAAAVILGTGTNAAYVEHANAIPKWTGLLPRSGNMV 288
Query: 269 INMEWGDFRSSHLSLSEYDNALDAESLNPGEQIFEKMISGMYLGEIVRRVLLRMAQEAAF 328
INMEWG+F+S L S+YDNALD ESLNPGEQI+EKMISGMYLGEIVRR+LL++A +A+
Sbjct: 289 INMEWGNFKSERLPRSDYDNALDFESLNPGEQIYEKMISGMYLGEIVRRILLKLAHDASL 348
Query: 329 FGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELCN 388
FGD VP KLE F LRTPDMSAMHHDTS DLK + KLKDIL ++ TSL R + +C+
Sbjct: 349 FGDVVPTKLEQRFILRTPDMSAMHHDTSHDLKHLGAKLKDILGVADTSLEARYITLHVCD 408
Query: 389 IVATRGARLAAAGILGVLKKMGRD-AAKDG-DKQKTVIAMDGGLYEHYAEYSKCLENTLE 446
+VA RGARLAAAGI G+LKK+GRD DG KQ+TVIA+DGGLYEHY ++ CLE TL
Sbjct: 409 LVAERGARLAAAGIYGILKKLGRDRVPSDGSQKQRTVIALDGGLYEHYKKFRTCLEATLA 468
Query: 447 ELLGEELFKNIVIEHSNDGSGIGAALLAASHSKY 480
+LLGEE ++V++ +NDGSGIGAALLAASHS+Y
Sbjct: 469 DLLGEEAASSVVVKLANDGSGIGAALLAASHSQY 502
|
Fructose and glucose phosphorylating enzyme. May be involved in the phosphorylation of glucose during the export from plastids to cytosol. Oryza sativa subsp. japonica (taxid: 39947) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 1 |
| >sp|Q2KNB7|HXK9_ORYSJ Hexokinase-9 OS=Oryza sativa subsp. japonica GN=HXK9 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 577 bits (1488), Expect = e-164, Method: Compositional matrix adjust.
Identities = 277/478 (57%), Positives = 364/478 (76%), Gaps = 15/478 (3%)
Query: 21 AVVVCRRVKRGGK-CGKANGIM-KEFEEKCRTPAAKLKQVADAMTVEMHAGLASEGGSKL 78
+ V+ +R +R K +A ++ ++ +E+C P L+QVADAM EM AGLA+EGGS L
Sbjct: 21 STVLHQRQRRAAKRSERAEAVLLRDLQERCAAPVELLRQVADAMAAEMRAGLAAEGGSDL 80
Query: 79 KMIISYVDNLPTGDEKGTYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTG 138
+M+++YVD+LP+G EKG +YALDLGGTNFRVLRV LGGK +I Q+ +SIP HLM+
Sbjct: 81 QMLVTYVDSLPSGGEKGMFYALDLGGTNFRVLRVQLGGKERRIIKQDSEGISIPQHLMSS 140
Query: 139 TSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGFTFSFPVMQTSINTGTL-------- 190
+S LFD++A LAKFV+ E E+ L G QRELGFTFSFPV Q S+ +GTL
Sbjct: 141 SSHELFDFVAVALAKFVASEGEDCHLPEGTQRELGFTFSFPVKQKSLASGTLIKWTKSFA 200
Query: 191 ----VGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRYTNKDVVAAVILGTGSNAA 246
VG+DVV EL+ A+ QGLDM V+ALVNDTVGTLA GRY N D +AAVILGTGSNAA
Sbjct: 201 IDEMVGKDVVAELNMAIRSQGLDMKVTALVNDTVGTLAAGRYVNHDTIAAVILGTGSNAA 260
Query: 247 YVERAQAIPKWHGVPSKSGEMVINMEWGDFRSSHLSLSEYDNALDAESLNPGEQIFEKMI 306
Y++ A AIPKWHG KSG MVINMEWG+F+SSHL L+E+D LDAESLNPG+Q++EK I
Sbjct: 261 YIDHADAIPKWHGSLPKSGNMVINMEWGNFKSSHLPLTEFDQELDAESLNPGKQVYEKSI 320
Query: 307 SGMYLGEIVRRVLLRMAQEAAFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKL 366
SGMY+GE+VRR+LL+MAQE FGD +PPKLE P+ LRT DM MHHDTSSDL+ V KL
Sbjct: 321 SGMYMGELVRRILLKMAQETRIFGDNIPPKLERPYILRTLDMLIMHHDTSSDLRTVANKL 380
Query: 367 KDILEISSTSLSMRKTIVELCNIVATRGARLAAAGILGVLKKMGRDAAKDGDKQKTVIAM 426
K++L I TS + RK ++++C +ATRGARLAAAGI G+++K+G+ + + ++VIA+
Sbjct: 381 KEVLGIEYTSFTTRKLVLDVCEAIATRGARLAAAGIYGIIQKLGQHSDSPSTR-RSVIAV 439
Query: 427 DGGLYEHYAEYSKCLENTLEELLGEELFKNIVIEHSNDGSGIGAALLAASHSKYLQDE 484
DGG+Y++Y +S+C+E+TL ++LG+EL +++I+H NDGSG+GAALLAAS+S+Y Q E
Sbjct: 440 DGGVYKYYTFFSQCMESTLSDMLGQELAPSVMIKHVNDGSGVGAALLAASYSQYHQAE 497
|
Fructose and glucose phosphorylating enzyme. May be involved in the phosphorylation of glucose during the export from plastids to cytosol. Oryza sativa subsp. japonica (taxid: 39947) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 1 |
| >sp|Q5W676|HXK5_ORYSJ Hexokinase-5 OS=Oryza sativa subsp. japonica GN=HXK5 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 572 bits (1475), Expect = e-162, Method: Compositional matrix adjust.
Identities = 288/459 (62%), Positives = 353/459 (76%), Gaps = 14/459 (3%)
Query: 36 KANGIMKEFEEKCRTPAAKLKQVADAMTVEMHAGLASEGGSKLKMIISYVDNLPTGDEKG 95
K ++++ E TP A L+ ++DAM EM GL + + +KM+I+YVDNLPTG+E+G
Sbjct: 45 KVAAVIEDVEHALSTPTALLRGISDAMVTEMERGLRGDSHAMVKMLITYVDNLPTGNEQG 104
Query: 96 TYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFV 155
+YALDLGGTNFRVLRV LGGK ++ Q++ EVSIPPHLM GTS LFD+IA+ L+KFV
Sbjct: 105 LFYALDLGGTNFRVLRVQLGGKEKRVVQQQYEEVSIPPHLMVGTSMELFDFIASALSKFV 164
Query: 156 SQESEEFKLSPGRQRELGFTFSFPVMQTSINTGTL------------VGRDVVEELSRAM 203
E ++F L GRQRELGFTFSFPV QTSI++GTL VG DVV EL +AM
Sbjct: 165 DTEGDDFHLPEGRQRELGFTFSFPVSQTSISSGTLIKWTKGFSINDAVGEDVVSELGKAM 224
Query: 204 AKQGLDMSVSALVNDTVGTLAGGRYTNKDVVAAVILGTGSNAAYVERAQAIPKWHGVPSK 263
+QGLDM ++ALVNDTVGTLAGGRY + VVAA+ILGTG+NAAYVE A AIPKW G+ +
Sbjct: 225 ERQGLDMKIAALVNDTVGTLAGGRYADNSVVAAIILGTGTNAAYVENANAIPKWTGLLPR 284
Query: 264 SGEMVINMEWGDFRSSHLSLSEYDNALDAESLNPGEQIFEKMISGMYLGEIVRRVLLRMA 323
SG MVIN EWG F+S L LSE+D A+D ESLNPGEQI+EK+ISGMYLGEIVRR+LL++A
Sbjct: 285 SGNMVINTEWGSFKSDKLPLSEFDKAMDFESLNPGEQIYEKLISGMYLGEIVRRILLKLA 344
Query: 324 QEAAFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTI 383
+AA FGD VP KLE PF LRTPDMSAMHHD+S DLK V KLKDI+ + TSL +R
Sbjct: 345 HDAALFGDVVPSKLEQPFVLRTPDMSAMHHDSSHDLKTVGAKLKDIVGVPDTSLEVRYIT 404
Query: 384 VELCNIVATRGARLAAAGILGVLKKMGRDA-AKDGDKQ-KTVIAMDGGLYEHYAEYSKCL 441
+C+IVA R ARLAAAGI GVLKK+GRD KDG K +TVIA+DGGLYEHY ++S CL
Sbjct: 405 SHICDIVAERAARLAAAGIYGVLKKLGRDKMPKDGSKMPRTVIALDGGLYEHYKKFSSCL 464
Query: 442 ENTLEELLGEELFKNIVIEHSNDGSGIGAALLAASHSKY 480
E+TL +LLG+++ ++V + +NDGSGIGAALLAASHS+Y
Sbjct: 465 ESTLTDLLGDDVSSSVVTKLANDGSGIGAALLAASHSQY 503
|
Fructose and glucose phosphorylating enzyme. May be involved in the phosphorylation of glucose during the export from plastids to cytosol. Oryza sativa subsp. japonica (taxid: 39947) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 484 | ||||||
| 224059148 | 494 | predicted protein [Populus trichocarpa] | 0.942 | 0.923 | 0.779 | 0.0 | |
| 255549814 | 494 | hexokinase, putative [Ricinus communis] | 0.946 | 0.927 | 0.780 | 0.0 | |
| 326580272 | 497 | hexokinase 1 [Eriobotrya japonica] | 0.942 | 0.917 | 0.764 | 0.0 | |
| 30961939 | 497 | hexokinase [Nicotiana benthamiana] | 1.0 | 0.973 | 0.723 | 0.0 | |
| 45387403 | 497 | hexokinase 1a [Nicotiana tabacum] | 1.0 | 0.973 | 0.717 | 0.0 | |
| 11386885 | 497 | RecName: Full=Hexokinase-1; AltName: Ful | 1.0 | 0.973 | 0.715 | 0.0 | |
| 350535787 | 498 | hexokinase [Solanum lycopersicum] gi|234 | 0.956 | 0.929 | 0.751 | 0.0 | |
| 408362903 | 497 | hexokinase [Malus x domestica] | 0.938 | 0.913 | 0.751 | 0.0 | |
| 50512106 | 497 | hexokinase 7 [Nicotiana tabacum] | 1.0 | 0.973 | 0.733 | 0.0 | |
| 225445080 | 497 | PREDICTED: hexokinase-1-like [Vitis vini | 0.956 | 0.931 | 0.734 | 0.0 |
| >gi|224059148|ref|XP_002299739.1| predicted protein [Populus trichocarpa] gi|222846997|gb|EEE84544.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 754 bits (1946), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/468 (77%), Positives = 410/468 (87%), Gaps = 12/468 (2%)
Query: 26 RRVKRGGKCGKANGIMKEFEEKCRTPAAKLKQVADAMTVEMHAGLASEGGSKLKMIISYV 85
R++KR + KA ++KE +EKC TP KLKQVADAM VEMHAGLASEGGSKLKM+ISYV
Sbjct: 27 RKMKRDRRWAKAMEMVKEMQEKCGTPIGKLKQVADAMVVEMHAGLASEGGSKLKMLISYV 86
Query: 86 DNLPTGDEKGTYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFD 145
DNLP+GDEKG +YALDLGGTNFRVLRV LGGK GL+NQEF EVSIPP+LM GTSDALFD
Sbjct: 87 DNLPSGDEKGLFYALDLGGTNFRVLRVQLGGKDGGLVNQEFTEVSIPPNLMIGTSDALFD 146
Query: 146 YIAAELAKFVSQESEEFKLSPGRQRELGFTFSFPVMQTSINTGTLV------------GR 193
YIAAELAKF++QE EEF+L PG+QRELGFTFSFPVMQTSI +GTLV G+
Sbjct: 147 YIAAELAKFIAQEGEEFELPPGKQRELGFTFSFPVMQTSIASGTLVRWTKGFSIDDAVGQ 206
Query: 194 DVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRYTNKDVVAAVILGTGSNAAYVERAQA 253
DVV EL+RAM +QGLDM VSALVNDTVGTLAGG+Y+ KDVVAAVILGTGSNAAYVE AQA
Sbjct: 207 DVVAELTRAMKRQGLDMRVSALVNDTVGTLAGGKYSYKDVVAAVILGTGSNAAYVEHAQA 266
Query: 254 IPKWHGVPSKSGEMVINMEWGDFRSSHLSLSEYDNALDAESLNPGEQIFEKMISGMYLGE 313
IPKWHG KSGEMVINMEWG+FRSSHL L+EYD+A+D ESLNPGEQIFEK+ISGMYLGE
Sbjct: 267 IPKWHGDLPKSGEMVINMEWGNFRSSHLPLTEYDHAMDNESLNPGEQIFEKLISGMYLGE 326
Query: 314 IVRRVLLRMAQEAAFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEIS 373
IVRRVLL+MA+EAAFFGD VPPKL++PF LRTPD+SAMHHD+SSDL +V+ KLKDILEIS
Sbjct: 327 IVRRVLLKMAEEAAFFGDIVPPKLKIPFILRTPDLSAMHHDSSSDLILVDKKLKDILEIS 386
Query: 374 STSLSMRKTIVELCNIVATRGARLAAAGILGVLKKMGRDAAKDGDKQKTVIAMDGGLYEH 433
+ SL RK +VELCNIVATRG+RLAAAGILG+LKK+GRD KD D+QKTVIAMDGGL+EH
Sbjct: 387 NASLQTRKVVVELCNIVATRGSRLAAAGILGILKKIGRDTVKDMDEQKTVIAMDGGLFEH 446
Query: 434 YAEYSKCLENTLEELLGEELFKNIVIEHSNDGSGIGAALLAASHSKYL 481
Y+EYSKCLENTL ELLGEE+ K I IEH+NDGSG+GAALLAASHS YL
Sbjct: 447 YSEYSKCLENTLNELLGEEVSKTISIEHANDGSGLGAALLAASHSLYL 494
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255549814|ref|XP_002515958.1| hexokinase, putative [Ricinus communis] gi|223544863|gb|EEF46378.1| hexokinase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 753 bits (1945), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/470 (78%), Positives = 409/470 (87%), Gaps = 12/470 (2%)
Query: 24 VCRRVKRGGKCGKANGIMKEFEEKCRTPAAKLKQVADAMTVEMHAGLASEGGSKLKMIIS 83
+ +++K+ GK + I+KE EEKC TP KLKQVADAM VEMHAGLASEGGSKLKM+IS
Sbjct: 25 IRQKMKKDGKWARVMEIVKELEEKCATPIGKLKQVADAMVVEMHAGLASEGGSKLKMLIS 84
Query: 84 YVDNLPTGDEKGTYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDAL 143
YVDNLPTGDE G YYALDLGGTNFRVLRVHLGGK GLINQEFAEV IPP+LMTGTSDAL
Sbjct: 85 YVDNLPTGDENGYYYALDLGGTNFRVLRVHLGGKDGGLINQEFAEVPIPPNLMTGTSDAL 144
Query: 144 FDYIAAELAKFVSQESEEFKLSPGRQRELGFTFSFPVMQTSINTGTLV------------ 191
FDYIAAEL KF+SQESEEF PG++RELGFTFSFPV+QTSI +GTLV
Sbjct: 145 FDYIAAELVKFISQESEEFHPPPGKKRELGFTFSFPVIQTSIASGTLVRWTKGFSIDDAV 204
Query: 192 GRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRYTNKDVVAAVILGTGSNAAYVERA 251
G+DVV +L+++M + G+DM VSALVNDTVGTLAGG+Y NKDVVAAVILGTG+NAAYVERA
Sbjct: 205 GQDVVAKLTKSMERMGVDMHVSALVNDTVGTLAGGKYFNKDVVAAVILGTGTNAAYVERA 264
Query: 252 QAIPKWHGVPSKSGEMVINMEWGDFRSSHLSLSEYDNALDAESLNPGEQIFEKMISGMYL 311
QAIPKWHG SGEMVINMEWG+FRSSHL L+EYD+ALD ESLNPGEQIFEK+ISGMYL
Sbjct: 265 QAIPKWHGPLPHSGEMVINMEWGNFRSSHLPLTEYDHALDVESLNPGEQIFEKIISGMYL 324
Query: 312 GEIVRRVLLRMAQEAAFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILE 371
GEI+RRVLL+MA+EAA FGDT+P KL+VPF LRTPDMSAMHHDTSSDLKVV KLKDILE
Sbjct: 325 GEIIRRVLLKMAEEAALFGDTIPLKLKVPFILRTPDMSAMHHDTSSDLKVVGNKLKDILE 384
Query: 372 ISSTSLSMRKTIVELCNIVATRGARLAAAGILGVLKKMGRDAAKDGDKQKTVIAMDGGLY 431
IS+TSL RK +VELCNIVATRGARLAAAGILG+LKKMG+D K+GD QKTVIAMDGGLY
Sbjct: 385 ISNTSLKTRKVVVELCNIVATRGARLAAAGILGILKKMGKDTVKEGDTQKTVIAMDGGLY 444
Query: 432 EHYAEYSKCLENTLEELLGEELFKNIVIEHSNDGSGIGAALLAASHSKYL 481
EHY+EYSKC+ENTL ELLGE++ K+I I HSNDGSGIGAALLAASHS YL
Sbjct: 445 EHYSEYSKCMENTLNELLGEDVPKSIEIVHSNDGSGIGAALLAASHSLYL 494
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|326580272|gb|ADZ96378.1| hexokinase 1 [Eriobotrya japonica] | Back alignment and taxonomy information |
|---|
Score = 753 bits (1944), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/468 (76%), Positives = 412/468 (88%), Gaps = 12/468 (2%)
Query: 26 RRVKRGGKCGKANGIMKEFEEKCRTPAAKLKQVADAMTVEMHAGLASEGGSKLKMIISYV 85
RR++ G+ +A+ I+KE EEKC TP KL+QVADAM VEMHAGLASEGGSKLKMIISYV
Sbjct: 25 RRMRSSGRWARASAIIKELEEKCGTPTGKLRQVADAMAVEMHAGLASEGGSKLKMIISYV 84
Query: 86 DNLPTGDEKGTYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFD 145
DNLPTG+EKG +YALDLGGTNFRVLRV LGGKG G+I+QEF EVSIP +LM GTSDALFD
Sbjct: 85 DNLPTGNEKGLFYALDLGGTNFRVLRVQLGGKGRGIISQEFIEVSIPENLMVGTSDALFD 144
Query: 146 YIAAELAKFVSQESEEFKLSPGRQRELGFTFSFPVMQTSINTGTL------------VGR 193
YIAAELAKFV++E ++ +L PGRQRELGFTFSFPV+Q+SIN+GTL VG+
Sbjct: 145 YIAAELAKFVAKEGQDHQLPPGRQRELGFTFSFPVLQSSINSGTLIKWTKGFSIDDAVGQ 204
Query: 194 DVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRYTNKDVVAAVILGTGSNAAYVERAQA 253
DVV ELS+A+ + GLDM VSALVNDTVGTLAGGRY N+DVVAAVILGTG+NAAYVERA A
Sbjct: 205 DVVSELSKAIERTGLDMRVSALVNDTVGTLAGGRYVNQDVVAAVILGTGTNAAYVERAHA 264
Query: 254 IPKWHGVPSKSGEMVINMEWGDFRSSHLSLSEYDNALDAESLNPGEQIFEKMISGMYLGE 313
IPKWHG+ KSGEMV+NMEWG+F+S+HL L+EYD++LD ESLNPG+QIFEK+ISGMYLGE
Sbjct: 265 IPKWHGLLPKSGEMVVNMEWGNFKSAHLPLTEYDHSLDTESLNPGDQIFEKIISGMYLGE 324
Query: 314 IVRRVLLRMAQEAAFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEIS 373
IVRRVL R+A+EA+ FGDTVPPKL VPF LRTPDMSAMHHD SSDL+VV KLK++LEIS
Sbjct: 325 IVRRVLCRIAEEASLFGDTVPPKLNVPFILRTPDMSAMHHDASSDLRVVREKLKNVLEIS 384
Query: 374 STSLSMRKTIVELCNIVATRGARLAAAGILGVLKKMGRDAAKDGDKQKTVIAMDGGLYEH 433
+TSL +RK IVELCNIVATRGARLAAAG+LGVLKK+GRDA KDG+ QKTV+A+DGGLYEH
Sbjct: 385 NTSLKVRKVIVELCNIVATRGARLAAAGVLGVLKKLGRDAVKDGENQKTVVALDGGLYEH 444
Query: 434 YAEYSKCLENTLEELLGEELFKNIVIEHSNDGSGIGAALLAASHSKYL 481
Y EYSKC+ENTL ELLGEE+ + I+IEHSNDGSGIGAALLAASHS+YL
Sbjct: 445 YTEYSKCMENTLRELLGEEVAETIIIEHSNDGSGIGAALLAASHSQYL 492
|
Source: Eriobotrya japonica Species: Eriobotrya japonica Genus: Eriobotrya Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|30961939|gb|AAP40021.1| hexokinase [Nicotiana benthamiana] | Back alignment and taxonomy information |
|---|
Score = 742 bits (1916), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/496 (72%), Positives = 413/496 (83%), Gaps = 12/496 (2%)
Query: 1 MGRVTVVVVCCAALAAGVAAAVVVCRRVKRGGKCGKANGIMKEFEEKCRTPAAKLKQVAD 60
M + TV A AA++V R+++ K +A I++EFEEKC TP AKLKQVAD
Sbjct: 1 MKKATVGAAVVGAATVCAVAALIVNHRMRKSSKWARAMAILREFEEKCGTPDAKLKQVAD 60
Query: 61 AMTVEMHAGLASEGGSKLKMIISYVDNLPTGDEKGTYYALDLGGTNFRVLRVHLGGKGVG 120
AMTVEMHAGLASEGGSKLKM+I+YVDNLPTGDE G +YALDLGGTNFRVLRV LGGK G
Sbjct: 61 AMTVEMHAGLASEGGSKLKMLITYVDNLPTGDEAGVFYALDLGGTNFRVLRVQLGGKDGG 120
Query: 121 LINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGFTFSFPV 180
+I+QEFAE SIPP+LM GTS+ LFDYIAAELAKFV++E E+F+ PG+QRELGFTFSFPV
Sbjct: 121 IIHQEFAEASIPPNLMVGTSEELFDYIAAELAKFVAEEEEKFQQPPGKQRELGFTFSFPV 180
Query: 181 MQTSINTGTL------------VGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRY 228
MQTSIN+GT+ VG+DVV EL++AM ++G+DM VSALVNDTVGTLAGG+Y
Sbjct: 181 MQTSINSGTIMRWTKGFSIDDAVGQDVVGELTKAMKRKGVDMRVSALVNDTVGTLAGGKY 240
Query: 229 TNKDVVAAVILGTGSNAAYVERAQAIPKWHGVPSKSGEMVINMEWGDFRSSHLSLSEYDN 288
T+ DV AVILGTG+NAAYVER QAIPKWHG KSGEMVINMEWG+FRSSHL L++YD+
Sbjct: 241 THNDVAVAVILGTGTNAAYVERVQAIPKWHGPMPKSGEMVINMEWGNFRSSHLPLTQYDH 300
Query: 289 ALDAESLNPGEQIFEKMISGMYLGEIVRRVLLRMAQEAAFFGDTVPPKLEVPFALRTPDM 348
ALD SLNPG+QIFEKM SGMYLGEI+RRVLLRMA+EA FGD VPPKL+ PF LRTPDM
Sbjct: 301 ALDTNSLNPGDQIFEKMTSGMYLGEILRRVLLRMAEEAGIFGDEVPPKLKSPFVLRTPDM 360
Query: 349 SAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELCNIVATRGARLAAAGILGVLKK 408
SAMHHDTSSDL+VV KLKDILEIS+TSL R+ +VELCNIVATRGARLAAAG+LG+LKK
Sbjct: 361 SAMHHDTSSDLRVVGDKLKDILEISNTSLKTRRLVVELCNIVATRGARLAAAGVLGILKK 420
Query: 409 MGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVIEHSNDGSGI 468
MGRD + G QK V+AMDGGLYEHYAEY CLENTL+ELLG+EL +IV EHSNDGSGI
Sbjct: 421 MGRDTPRQGGPQKMVVAMDGGLYEHYAEYRTCLENTLKELLGDELATSIVFEHSNDGSGI 480
Query: 469 GAALLAASHSKYLQDE 484
GAALLAAS+S YL+D+
Sbjct: 481 GAALLAASNSMYLEDK 496
|
Source: Nicotiana benthamiana Species: Nicotiana benthamiana Genus: Nicotiana Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|45387403|gb|AAS60192.1| hexokinase 1a [Nicotiana tabacum] | Back alignment and taxonomy information |
|---|
Score = 738 bits (1904), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/496 (71%), Positives = 412/496 (83%), Gaps = 12/496 (2%)
Query: 1 MGRVTVVVVCCAALAAGVAAAVVVCRRVKRGGKCGKANGIMKEFEEKCRTPAAKLKQVAD 60
M + TV A AA +V R+++ K +A I++EFEEKC TP AKLKQVAD
Sbjct: 1 MKKATVGAAVVGAATVCAVAAFIVNHRMRKSSKWARAMAILREFEEKCGTPDAKLKQVAD 60
Query: 61 AMTVEMHAGLASEGGSKLKMIISYVDNLPTGDEKGTYYALDLGGTNFRVLRVHLGGKGVG 120
AMTVEMHAGLASEGGSKLKM+I+YVDNLPTGDE G +YALDLGGTNFRVLRV LGGK G
Sbjct: 61 AMTVEMHAGLASEGGSKLKMLITYVDNLPTGDEAGVFYALDLGGTNFRVLRVQLGGKDGG 120
Query: 121 LINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGFTFSFPV 180
+++QEFAE SIPP+LM GTS+ALFDYIAAELAKFV++E E+F+ PG+QRELGFTFSFPV
Sbjct: 121 IVHQEFAEASIPPNLMVGTSEALFDYIAAELAKFVAEEEEKFQQPPGKQRELGFTFSFPV 180
Query: 181 MQTSINTGTL------------VGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRY 228
MQTSIN+GT+ VG+DVV EL++AM ++G+DM VSALVNDTVGTLAGG+Y
Sbjct: 181 MQTSINSGTIMRWTKGFSIDDAVGQDVVGELTKAMKRKGVDMRVSALVNDTVGTLAGGKY 240
Query: 229 TNKDVVAAVILGTGSNAAYVERAQAIPKWHGVPSKSGEMVINMEWGDFRSSHLSLSEYDN 288
T+ DV AVILGTG+NAAYVER QAIPKWHG KSGEMVINMEWG+FRSSHL L++YD+
Sbjct: 241 THNDVAVAVILGTGTNAAYVERVQAIPKWHGPVPKSGEMVINMEWGNFRSSHLPLTQYDH 300
Query: 289 ALDAESLNPGEQIFEKMISGMYLGEIVRRVLLRMAQEAAFFGDTVPPKLEVPFALRTPDM 348
ALD SLNPG+QIFEKM SGMYLGEI+RRVLLR+A++A FGD VPPKL+ PF LRTPDM
Sbjct: 301 ALDTNSLNPGDQIFEKMTSGMYLGEILRRVLLRVAEDAGIFGDEVPPKLKSPFVLRTPDM 360
Query: 349 SAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELCNIVATRGARLAAAGILGVLKK 408
SAMHHD SSDL+VV KLKDILEIS+TSL R+ +VELCNIVATRGARLAAAGILG+LKK
Sbjct: 361 SAMHHDISSDLRVVGDKLKDILEISNTSLKTRRLVVELCNIVATRGARLAAAGILGILKK 420
Query: 409 MGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVIEHSNDGSGI 468
MGRD + G +KTV+AMDGGLYEHY EY CLENTL+ELLG+EL +IV EHSNDGSGI
Sbjct: 421 MGRDTPRQGGPEKTVVAMDGGLYEHYTEYRTCLENTLKELLGDELATSIVFEHSNDGSGI 480
Query: 469 GAALLAASHSKYLQDE 484
GAALLAAS+S YL+D+
Sbjct: 481 GAALLAASNSMYLEDK 496
|
Source: Nicotiana tabacum Species: Nicotiana tabacum Genus: Nicotiana Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|11386885|sp|Q9SEK2.1|HXK1_TOBAC RecName: Full=Hexokinase-1; AltName: Full=NtHxK1 gi|6594674|gb|AAF18585.1|AF118133_1 chloroplast outer envelope hexokinase 1 [Nicotiana tabacum] | Back alignment and taxonomy information |
|---|
Score = 737 bits (1902), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/496 (71%), Positives = 413/496 (83%), Gaps = 12/496 (2%)
Query: 1 MGRVTVVVVCCAALAAGVAAAVVVCRRVKRGGKCGKANGIMKEFEEKCRTPAAKLKQVAD 60
M + TV A AA++V R+++ K +A I++EFEEKC TP AKLKQVAD
Sbjct: 1 MKKATVGAAVIGAATVCAVAALIVNHRMRKSSKWARAMAILREFEEKCGTPDAKLKQVAD 60
Query: 61 AMTVEMHAGLASEGGSKLKMIISYVDNLPTGDEKGTYYALDLGGTNFRVLRVHLGGKGVG 120
AMTVEMHAGLASEGGSKLKM+I+YVDNLPTGDE G +YALDLGGTNFRVLRV LGGK G
Sbjct: 61 AMTVEMHAGLASEGGSKLKMLITYVDNLPTGDEAGVFYALDLGGTNFRVLRVQLGGKDGG 120
Query: 121 LINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGFTFSFPV 180
+++QEFAE SIPP+LM GTS+ALFDYIAAELAKFV++E E+F+ PG+QRELGFTFSFPV
Sbjct: 121 IVHQEFAEASIPPNLMVGTSEALFDYIAAELAKFVNEEGEKFQQPPGKQRELGFTFSFPV 180
Query: 181 MQTSINTGTL------------VGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRY 228
MQTSIN+GT+ VG+DVV EL++AM ++G+DM VSALVNDTVGTLAGG+Y
Sbjct: 181 MQTSINSGTIMRWTKGFSIDDAVGQDVVGELAKAMKRKGVDMRVSALVNDTVGTLAGGKY 240
Query: 229 TNKDVVAAVILGTGSNAAYVERAQAIPKWHGVPSKSGEMVINMEWGDFRSSHLSLSEYDN 288
T+ DV AVILGTG+NAAYVER QAIPKWHG KSGEMVINMEWG+FRSSHL L++YD+
Sbjct: 241 THNDVAVAVILGTGTNAAYVERVQAIPKWHGPVPKSGEMVINMEWGNFRSSHLPLTQYDH 300
Query: 289 ALDAESLNPGEQIFEKMISGMYLGEIVRRVLLRMAQEAAFFGDTVPPKLEVPFALRTPDM 348
ALD SLNPG+QIFEKM SGMYLGEI+RRVLLR+A+EA FGD VPPKL+ PF LRTPDM
Sbjct: 301 ALDTNSLNPGDQIFEKMTSGMYLGEILRRVLLRVAEEAGIFGDEVPPKLKSPFVLRTPDM 360
Query: 349 SAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELCNIVATRGARLAAAGILGVLKK 408
SAMHHD SSDL+VV KLKDILEIS+TSL R+ ++ELCNIVATRGARLAAAG+LG+LKK
Sbjct: 361 SAMHHDASSDLRVVGDKLKDILEISNTSLKTRRLVIELCNIVATRGARLAAAGVLGILKK 420
Query: 409 MGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVIEHSNDGSGI 468
MGRD + G +KTV+AMDGGLYEHY EY CLENTL+ELLG+EL +IV EHSNDGSGI
Sbjct: 421 MGRDTPRQGGLEKTVVAMDGGLYEHYTEYRMCLENTLKELLGDELATSIVFEHSNDGSGI 480
Query: 469 GAALLAASHSKYLQDE 484
GAALLAAS+S YL+D+
Sbjct: 481 GAALLAASNSMYLEDK 496
|
Source: Nicotiana tabacum Species: Nicotiana tabacum Genus: Nicotiana Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|350535787|ref|NP_001233957.1| hexokinase [Solanum lycopersicum] gi|23477117|emb|CAC81350.1| hexokinase [Solanum lycopersicum] | Back alignment and taxonomy information |
|---|
Score = 737 bits (1902), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/475 (75%), Positives = 403/475 (84%), Gaps = 12/475 (2%)
Query: 22 VVVCRRVKRGGKCGKANGIMKEFEEKCRTPAAKLKQVADAMTVEMHAGLASEGGSKLKMI 81
++V R+++ K G+A I++EFEEKC+T AKLKQVADAMTVEMHAGLASEGGSKLKM+
Sbjct: 22 LIVNHRMRKSSKWGRAMAILREFEEKCKTQDAKLKQVADAMTVEMHAGLASEGGSKLKML 81
Query: 82 ISYVDNLPTGDEKGTYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSD 141
I+YVDNLPTGDE G +YALDLGGTNFRVLRV LGGK G+I+QEFAE SIPP LM GTSD
Sbjct: 82 ITYVDNLPTGDEAGVFYALDLGGTNFRVLRVQLGGKDGGIIHQEFAEASIPPSLMVGTSD 141
Query: 142 ALFDYIAAELAKFVSQESEEFKLSPGRQRELGFTFSFPVMQTSINTGTL----------- 190
LFDYIAAELAKFV+ E E+F PG+QRELGFTFSFPVMQTSIN+G +
Sbjct: 142 ELFDYIAAELAKFVAAEEEKFHQPPGKQRELGFTFSFPVMQTSINSGNIMRWTKGFSIDD 201
Query: 191 -VGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRYTNKDVVAAVILGTGSNAAYVE 249
VG+DVV EL++AM ++G+DM VSALVNDTVGTLAGG+YT KDV AVILGTG+NAAYVE
Sbjct: 202 AVGQDVVGELTKAMKRKGVDMRVSALVNDTVGTLAGGKYTQKDVAVAVILGTGTNAAYVE 261
Query: 250 RAQAIPKWHGVPSKSGEMVINMEWGDFRSSHLSLSEYDNALDAESLNPGEQIFEKMISGM 309
R QAIPKWHG KSGEMVINMEWG+FRSSHL L+EYD+ALD ESLNPGEQIFEKM SGM
Sbjct: 262 RVQAIPKWHGPVPKSGEMVINMEWGNFRSSHLPLTEYDHALDNESLNPGEQIFEKMTSGM 321
Query: 310 YLGEIVRRVLLRMAQEAAFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDI 369
YLGEI+RRVLLR+A+EA FGD VPPKL+ PF LRTPDMSAMHHDTSSDLKVV KLKDI
Sbjct: 322 YLGEILRRVLLRVAEEAGVFGDEVPPKLKEPFVLRTPDMSAMHHDTSSDLKVVGEKLKDI 381
Query: 370 LEISSTSLSMRKTIVELCNIVATRGARLAAAGILGVLKKMGRDAAKDGDKQKTVIAMDGG 429
LEIS+TSL RK +VELCNIVATRGARLAAAG+LG+LKKMGRD K G ++TVIAMDGG
Sbjct: 382 LEISNTSLKTRKLVVELCNIVATRGARLAAAGVLGILKKMGRDTPKQGGSERTVIAMDGG 441
Query: 430 LYEHYAEYSKCLENTLEELLGEELFKNIVIEHSNDGSGIGAALLAASHSKYLQDE 484
LYEHY EY CLEN+L++LLGEEL +IV HSNDGSGIGAALLAASHS YL+D+
Sbjct: 442 LYEHYTEYRMCLENSLKDLLGEELATSIVFVHSNDGSGIGAALLAASHSMYLEDQ 496
|
Source: Solanum lycopersicum Species: Solanum lycopersicum Genus: Solanum Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|408362903|gb|AFU56883.1| hexokinase [Malus x domestica] | Back alignment and taxonomy information |
|---|
Score = 736 bits (1901), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/466 (75%), Positives = 409/466 (87%), Gaps = 12/466 (2%)
Query: 27 RVKRGGKCGKANGIMKEFEEKCRTPAAKLKQVADAMTVEMHAGLASEGGSKLKMIISYVD 86
R++ G+ +A+ I+KE EEKC TP KL+QVADAM VEMHAGLASEGGSKLK+IISYVD
Sbjct: 26 RMRSSGRWARASAIIKELEEKCGTPTEKLRQVADAMAVEMHAGLASEGGSKLKVIISYVD 85
Query: 87 NLPTGDEKGTYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDY 146
NLPTG+EKG +YALDLGGTNFRVLRV LGGKG G+++QEF EVSIP +LM GTSDALFDY
Sbjct: 86 NLPTGNEKGLFYALDLGGTNFRVLRVRLGGKGRGIVSQEFIEVSIPENLMVGTSDALFDY 145
Query: 147 IAAELAKFVSQESEEFKLSPGRQRELGFTFSFPVMQTSINTGTL------------VGRD 194
IAAELAKFV++E ++ + PGRQRELGFTFSFPV+Q+SIN+GTL VG+D
Sbjct: 146 IAAELAKFVAKEGQDHQPPPGRQRELGFTFSFPVLQSSINSGTLLKWTKGFSIDDAVGQD 205
Query: 195 VVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRYTNKDVVAAVILGTGSNAAYVERAQAI 254
VV LS+A+ + GLDM VSALVNDT+GTLAGGRY N+DVVAAVILGTG+NAAYVERAQAI
Sbjct: 206 VVAALSKAIERTGLDMCVSALVNDTIGTLAGGRYINQDVVAAVILGTGTNAAYVERAQAI 265
Query: 255 PKWHGVPSKSGEMVINMEWGDFRSSHLSLSEYDNALDAESLNPGEQIFEKMISGMYLGEI 314
PKWHG+ KSGEMVINMEWG+F+S+HL L+EYD++LD ESLNPG+QIFEK+ISGMYLGEI
Sbjct: 266 PKWHGLLPKSGEMVINMEWGNFKSAHLPLTEYDHSLDTESLNPGDQIFEKIISGMYLGEI 325
Query: 315 VRRVLLRMAQEAAFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISS 374
VRRVL R+A+EA+ FGDT+PPKL+VPF LRTPDMSAMH D SSDL+VV KLK++LEIS+
Sbjct: 326 VRRVLCRIAEEASLFGDTIPPKLKVPFNLRTPDMSAMHQDASSDLRVVREKLKNVLEISN 385
Query: 375 TSLSMRKTIVELCNIVATRGARLAAAGILGVLKKMGRDAAKDGDKQKTVIAMDGGLYEHY 434
TSL +RK IVELCNIVATRGARLAAAG+LGVLKK+GRDA KDG+ +KTV+A+DGGLYEHY
Sbjct: 386 TSLKVRKVIVELCNIVATRGARLAAAGVLGVLKKLGRDAVKDGENKKTVVALDGGLYEHY 445
Query: 435 AEYSKCLENTLEELLGEELFKNIVIEHSNDGSGIGAALLAASHSKY 480
EYSKC+ENTL ELLGEE+ + +VIEHSNDGSGIGAALLAASHS+Y
Sbjct: 446 TEYSKCMENTLRELLGEEVAETVVIEHSNDGSGIGAALLAASHSQY 491
|
Source: Malus x domestica Species: Malus x domestica Genus: Malus Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|50512106|gb|AAT77515.1| hexokinase 7 [Nicotiana tabacum] | Back alignment and taxonomy information |
|---|
Score = 735 bits (1898), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/496 (73%), Positives = 412/496 (83%), Gaps = 12/496 (2%)
Query: 1 MGRVTVVVVCCAALAAGVAAAVVVCRRVKRGGKCGKANGIMKEFEEKCRTPAAKLKQVAD 60
M +VTV A A AA++V R+++ K G+A I++EFEEKC+T AKLKQVAD
Sbjct: 1 MKKVTVGAAVVGAAAVCAVAALIVNHRMRKSSKWGRAMAILREFEEKCKTQDAKLKQVAD 60
Query: 61 AMTVEMHAGLASEGGSKLKMIISYVDNLPTGDEKGTYYALDLGGTNFRVLRVHLGGKGVG 120
AMTVEMHAGLASEGGSKLKM+I+YVDNLPTGDE G +YALDLGGTNFRVLRV LGGK G
Sbjct: 61 AMTVEMHAGLASEGGSKLKMLITYVDNLPTGDEAGVFYALDLGGTNFRVLRVQLGGKDGG 120
Query: 121 LINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGFTFSFPV 180
+I+QEFAE SIPP LM GTSDALFDYIAAELAKFV+ E E+F PG+QRELGFTFSFPV
Sbjct: 121 IIHQEFAEASIPPSLMVGTSDALFDYIAAELAKFVAAEEEKFHQPPGKQRELGFTFSFPV 180
Query: 181 MQTSINTGTL------------VGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRY 228
MQTSIN+GT+ VG+DVV EL++AM ++G+DM VSALVNDTVGTLAGG+Y
Sbjct: 181 MQTSINSGTIMRWTKGFSIDDAVGQDVVGELTKAMKRKGVDMRVSALVNDTVGTLAGGKY 240
Query: 229 TNKDVVAAVILGTGSNAAYVERAQAIPKWHGVPSKSGEMVINMEWGDFRSSHLSLSEYDN 288
T KDV AVILGTG+NAAYVER QAIPKWHG KSGEMVINMEWG+FRSSHL L+EYD+
Sbjct: 241 TQKDVAVAVILGTGTNAAYVERVQAIPKWHGPVPKSGEMVINMEWGNFRSSHLPLTEYDH 300
Query: 289 ALDAESLNPGEQIFEKMISGMYLGEIVRRVLLRMAQEAAFFGDTVPPKLEVPFALRTPDM 348
ALD ESLNPGEQIFEKM SGMYLGEI+RRVLLR+++EA FGD VPPKL+ F LRTPDM
Sbjct: 301 ALDNESLNPGEQIFEKMTSGMYLGEILRRVLLRVSEEAGVFGDEVPPKLKDSFVLRTPDM 360
Query: 349 SAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELCNIVATRGARLAAAGILGVLKK 408
SAMHHDTS DLKVV KLKDILEIS+TSL RK +VELCNIVATRGARLAAAG+LG+LKK
Sbjct: 361 SAMHHDTSPDLKVVGEKLKDILEISNTSLKTRKLVVELCNIVATRGARLAAAGVLGILKK 420
Query: 409 MGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVIEHSNDGSGI 468
MGRD K G ++TVIAMDGGLYEHY EY CLEN+L++LLGEEL +IV HSNDGSGI
Sbjct: 421 MGRDTPKQGGSERTVIAMDGGLYEHYTEYRMCLENSLKDLLGEELATSIVFVHSNDGSGI 480
Query: 469 GAALLAASHSKYLQDE 484
GAALLAASHS YL+D+
Sbjct: 481 GAALLAASHSMYLEDQ 496
|
Source: Nicotiana tabacum Species: Nicotiana tabacum Genus: Nicotiana Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225445080|ref|XP_002283608.1| PREDICTED: hexokinase-1-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 731 bits (1886), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/475 (73%), Positives = 408/475 (85%), Gaps = 12/475 (2%)
Query: 22 VVVCRRVKRGGKCGKANGIMKEFEEKCRTPAAKLKQVADAMTVEMHAGLASEGGSKLKMI 81
++ R++ G+ +A I++EFEEKC TP AKL+QVADAMTVEMHAGLASEGGSKLKMI
Sbjct: 22 LIARHRMRSSGRWARAMAILREFEEKCGTPIAKLRQVADAMTVEMHAGLASEGGSKLKMI 81
Query: 82 ISYVDNLPTGDEKGTYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSD 141
ISYVDNLPTGDEKG +YALDLGGTNFRVLRV LGGK ++ QEF EVSIPPHLM G+SD
Sbjct: 82 ISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGKDKRVVKQEFEEVSIPPHLMVGSSD 141
Query: 142 ALFDYIAAELAKFVSQESEEFKLSPGRQRELGFTFSFPVMQTSINTGTL----------- 190
ALFDYIAA LAKFV+ E E +SPGRQRELGFTFSFPV Q+SI++G+L
Sbjct: 142 ALFDYIAAALAKFVATEGEGLHVSPGRQRELGFTFSFPVRQSSISSGSLIKWTKGFSIED 201
Query: 191 -VGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRYTNKDVVAAVILGTGSNAAYVE 249
VG+DVV EL++AM + GLDM VSALVNDT+GTLAGGRY ++DVVAAVILGTG+NAAYVE
Sbjct: 202 AVGQDVVGELTKAMERIGLDMRVSALVNDTIGTLAGGRYYDQDVVAAVILGTGTNAAYVE 261
Query: 250 RAQAIPKWHGVPSKSGEMVINMEWGDFRSSHLSLSEYDNALDAESLNPGEQIFEKMISGM 309
RAQ+IPKWHG+ KSG+MVINMEWG+FRSSHL L+EYD LDAESLNPGEQIFEK+ISGM
Sbjct: 262 RAQSIPKWHGLLPKSGDMVINMEWGNFRSSHLPLTEYDQVLDAESLNPGEQIFEKIISGM 321
Query: 310 YLGEIVRRVLLRMAQEAAFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDI 369
YLG+IVRRVL RMA+EA FGDTVPPKL++PF LRTPDMSAMHHDTS DL+VV +KLKDI
Sbjct: 322 YLGDIVRRVLCRMAEEADLFGDTVPPKLKIPFILRTPDMSAMHHDTSPDLRVVGSKLKDI 381
Query: 370 LEISSTSLSMRKTIVELCNIVATRGARLAAAGILGVLKKMGRDAAKDGDKQKTVIAMDGG 429
L+I +TSL RK ++ELC+IVATRGARL+AAGILG+LKK+GRD K+GDKQ +VIA+DGG
Sbjct: 382 LDIPNTSLKTRKVVIELCDIVATRGARLSAAGILGILKKLGRDTMKEGDKQNSVIALDGG 441
Query: 430 LYEHYAEYSKCLENTLEELLGEELFKNIVIEHSNDGSGIGAALLAASHSKYLQDE 484
LYEHY E+ CLE+TL+ELLG E+ NIVI+HSNDGSGIGAALLAASHS+YL+++
Sbjct: 442 LYEHYTEFRTCLESTLKELLGAEVSDNIVIKHSNDGSGIGAALLAASHSQYLEED 496
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 484 | ||||||
| TAIR|locus:2119931 | 496 | HXK1 "hexokinase 1" [Arabidops | 0.917 | 0.895 | 0.646 | 9.2e-155 | |
| TAIR|locus:2051920 | 502 | HXK2 "hexokinase 2" [Arabidops | 0.919 | 0.886 | 0.645 | 1.3e-153 | |
| TAIR|locus:2087590 | 502 | ATHXK4 "AT3G20040" [Arabidopsi | 0.900 | 0.868 | 0.458 | 5.6e-100 | |
| TAIR|locus:2008031 | 498 | HKL1 "AT1G50460" [Arabidopsis | 0.896 | 0.871 | 0.464 | 1.1e-96 | |
| TAIR|locus:2202410 | 493 | HXK3 "hexokinase 3" [Arabidops | 0.904 | 0.888 | 0.453 | 1.6e-95 | |
| TAIR|locus:2137564 | 493 | HKL3 "AT4G37840" [Arabidopsis | 0.863 | 0.847 | 0.401 | 4.4e-84 | |
| POMBASE|SPAC24H6.04 | 484 | hxk1 "hexokinase 1" [Schizosac | 0.873 | 0.873 | 0.327 | 1.3e-54 | |
| CGD|CAL0000198 | 484 | HXK2 [Candida albicans (taxid: | 0.878 | 0.878 | 0.338 | 4.4e-52 | |
| UNIPROTKB|F1PAZ2 | 889 | HK2 "Uncharacterized protein" | 0.768 | 0.418 | 0.339 | 4.3e-50 | |
| UNIPROTKB|G5EHQ5 | 495 | MGCH7_ch7g833 "Glucokinase" [M | 0.576 | 0.563 | 0.294 | 5.6e-49 |
| TAIR|locus:2119931 HXK1 "hexokinase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1509 (536.3 bits), Expect = 9.2e-155, P = 9.2e-155
Identities = 295/456 (64%), Positives = 352/456 (77%)
Query: 40 IMKEFEEKCRTPAAKLKQVADAMTVEMHAGLASEGGSKLKMIISYVDNLPTGDEKGTYYA 99
I+K FEE C TP +KL+QVADAMTVEMHAGLAS+GGSKLKM+ISYVDNLP+GDEKG +YA
Sbjct: 40 ILKAFEEDCATPISKLRQVADAMTVEMHAGLASDGGSKLKMLISYVDNLPSGDEKGLFYA 99
Query: 100 LDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQES 159
LDLGGTNFRV+RV LGGK ++ QEF EVSIPPHLMTG SD LF++IA LAKFV+ E
Sbjct: 100 LDLGGTNFRVMRVLLGGKQERVVKQEFEEVSIPPHLMTGGSDELFNFIAEALAKFVATEC 159
Query: 160 EEFKLSPGRQRELGFTFSFPVMQTSINTGTL------------VGRDVVEELSRAMAKQG 207
E+F L GRQRELGFTFSFPV QTS+++G+L VG+DVV L++A+ + G
Sbjct: 160 EDFHLPEGRQRELGFTFSFPVKQTSLSSGSLIKWTKGFSIEEAVGQDVVGALNKALERVG 219
Query: 208 LDMSVSALVNDTVGTLAGGRYTNKDVVAAVILGTGSNAAYVERAQAIPKWHGVPSKSGEM 267
LDM ++ALVNDTVGTLAGGRY N DVVAAVILGTG+NAAYVERA AIPKWHG+ KSGEM
Sbjct: 220 LDMRIAALVNDTVGTLAGGRYYNPDVVAAVILGTGTNAAYVERATAIPKWHGLLPKSGEM 279
Query: 268 VINMEWGDFRSSHLSLSEYDNALDAESLNPGEQIFEKMISGMYLGEIVRRVLLRMAQEAA 327
VINMEWG+FRSSHL L+E+D+ LD ESLNPGEQI EK+ISGMYLGEI+RRVLL+MA++AA
Sbjct: 280 VINMEWGNFRSSHLPLTEFDHTLDFESLNPGEQILEKIISGMYLGEILRRVLLKMAEDAA 339
Query: 328 FFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELC 387
FFGDTVP KL +PF +RTP MSAMH+DTS DLK+V +K+KDILE+ +TSL MRK ++ LC
Sbjct: 340 FFGDTVPSKLRIPFIIRTPHMSAMHNDTSPDLKIVGSKIKDILEVPTTSLKMRKVVISLC 399
Query: 388 NXXXXXXXXXXXXXXXXXXKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCXXXXXXX 447
N KK+GRD KD + QK+VIAMDGGL+EHY ++S+C
Sbjct: 400 NIIATRGARLSAAGIYGILKKLGRDTTKDEEVQKSVIAMDGGLFEHYTQFSECMESSLKE 459
Query: 448 XXXXXXFKNIVIEHSNDGSGIGXXXXXXSHSKYLQD 483
++ + HSNDGSGIG SHS YL+D
Sbjct: 460 LLGDEASGSVEVTHSNDGSGIGAALLAASHSLYLED 495
|
|
| TAIR|locus:2051920 HXK2 "hexokinase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1498 (532.4 bits), Expect = 1.3e-153, P = 1.3e-153
Identities = 295/457 (64%), Positives = 351/457 (76%)
Query: 40 IMKEFEEKCRTPAAKLKQVADAMTVEMHAGLASEGGSKLKMIISYVDNLPTGDEKGTYYA 99
I+K FEE C TP AKL+QVADAMTVEMHAGLASEGGSKLKM+ISYVDNLP+GDE G +YA
Sbjct: 40 ILKAFEEDCATPIAKLRQVADAMTVEMHAGLASEGGSKLKMLISYVDNLPSGDETGFFYA 99
Query: 100 LDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQES 159
LDLGGTNFRV+RV LGGK ++ +EF E SIPPHLMTG S LFD+I LAKFV+ E
Sbjct: 100 LDLGGTNFRVMRVLLGGKHDRVVKREFKEESIPPHLMTGKSHELFDFIVDVLAKFVATEG 159
Query: 160 EEFKLSPGRQRELGFTFSFPVMQTSINTGTLVG------------RDVVEELSRAMAKQG 207
E+F L PGRQRELGFTFSFPV Q S+++GTL+ +DVV EL +AM + G
Sbjct: 160 EDFHLPPGRQRELGFTFSFPVKQLSLSSGTLINWTKGFSIDDTVDKDVVGELVKAMERVG 219
Query: 208 LDMSVSALVNDTVGTLAGGRYTNKDVVAAVILGTGSNAAYVERAQAIPKWHGVPSKSGEM 267
LDM V+ALVNDT+GTLAGGRYTN DVV AVILGTG+NAAYVERA AIPKWHG+ KSGEM
Sbjct: 220 LDMLVAALVNDTIGTLAGGRYTNPDVVVAVILGTGTNAAYVERAHAIPKWHGLLPKSGEM 279
Query: 268 VINMEWGDFRSSHLSLSEYDNALDAESLNPGEQIFEKMISGMYLGEIVRRVLLRMAQEAA 327
VINMEWG+FRSSHL L+EYD++LD +SLNPGEQI EK+ISGMYLGEI+RRVLL+MA+EAA
Sbjct: 280 VINMEWGNFRSSHLPLTEYDHSLDVDSLNPGEQILEKIISGMYLGEILRRVLLKMAEEAA 339
Query: 328 FFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELC 387
FFGD VPPKL++PF +RTP+MSAMH DTS DLKVV +KLKDILE+ ++SL MRK ++ LC
Sbjct: 340 FFGDIVPPKLKIPFIIRTPNMSAMHSDTSPDLKVVGSKLKDILEVQTSSLKMRKVVISLC 399
Query: 388 NXXXXXXXXXXXXXXXXXXKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCXXXXXXX 447
N KK+GRDA KDG+ QK+VIAMDGGL+EHY ++S+
Sbjct: 400 NIIASRGARLSAAGIYGILKKIGRDATKDGEAQKSVIAMDGGLFEHYTQFSESMKSSLKE 459
Query: 448 XXXXXXFKNIVIEHSNDGSGIGXXXXXXSHSKYLQDE 484
+++ + SNDGSG+G SHS+YL+ E
Sbjct: 460 LLGDEVSESVEVILSNDGSGVGAALLAASHSQYLELE 496
|
|
| TAIR|locus:2087590 ATHXK4 "AT3G20040" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 992 (354.3 bits), Expect = 5.6e-100, P = 5.6e-100
Identities = 209/456 (45%), Positives = 286/456 (62%)
Query: 39 GIMKEFEEKCRTPAAKLKQVADAMTVEMHAGLASEGGSKLKMIISYVDNLPTGDEKGTYY 98
G++K+ EE C TP +L+Q+ DA+ VEM AGL SEGGSKLKM++++VD+LP G E GTYY
Sbjct: 39 GLLKDLEEACETPLGRLRQMVDAIAVEMQAGLVSEGGSKLKMLLTFVDDLPNGSETGTYY 98
Query: 99 ALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQE 158
AL LGG+ FR+++VHLGG+ L Q+ SIP LM TS+ LFD++A+ L +F+ +E
Sbjct: 99 ALHLGGSYFRIIKVHLGGQRSSLEVQDVERHSIPTSLMNSTSEVLFDFLASSLQRFIEKE 158
Query: 159 SEEFKLSPGRQRELGFTFSFPVMQTSINTGTLV------------GRDVVEELSRAMAKQ 206
+F LS +REL FTFSFPV QTSI++G L+ G D+ E L A+ K+
Sbjct: 159 GNDFSLSQPLKRELAFTFSFPVKQTSISSGVLIKWTKGFAISEMAGEDIAECLQGALNKR 218
Query: 207 GLDMSVSALVNDTVGTLAGGRYTNKDVVAAVILGTGSNAAYVERAQAIPKWHGVPSKSGE 266
GLD+ V+ALVNDTVG L+ G + + D +AAV+ GTGSNA Y+ER AI K + SG
Sbjct: 219 GLDIRVAALVNDTVGALSFGHFHDPDTIAAVVFGTGSNACYLERTDAIIKCQNPRTTSGS 278
Query: 267 MVINMEWGDFRSSHLSLSEYDNALDAESLNPGEQIFEKMISGMYLGEIVRRVLLRMAQEA 326
MV+NMEWG+F SS L + YD LDAES+N + FEKMI GMYLG+IVRRV+LRM+QE+
Sbjct: 279 MVVNMEWGNFWSSRLPRTSYDLELDAESMNSNDMGFEKMIGGMYLGDIVRRVILRMSQES 338
Query: 327 AFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVEL 386
FG + L PF LRT +SAMH D +S+L+ V LKD L +S + +RK +V++
Sbjct: 339 DIFGP-ISSILSTPFVLRTNSVSAMHEDDTSELQEVARILKD-LGVSEVPMKVRKLVVKI 396
Query: 387 CNXXXXXXXXXXXXXXXXXXKKMGRDAAKDG---DKQ---KTVIAMDGGLYEHYAEYSKC 440
C+ KK+GRD + G DKQ +TV+A++GGLY +Y + +
Sbjct: 397 CDVVTRRAARLAAAGIAGILKKVGRDGSGGGRRSDKQIMRRTVVAVEGGLYLNYRMFREY 456
Query: 441 XXXXXXXXXXXXXFKNIVIEHSNDGSGIGXXXXXXS 476
+++V++ DGS IG S
Sbjct: 457 MDEALRDILGEDVAQHVVVKAMEDGSSIGSALLLAS 492
|
|
| TAIR|locus:2008031 HKL1 "AT1G50460" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 961 (343.3 bits), Expect = 1.1e-96, P = 1.1e-96
Identities = 213/459 (46%), Positives = 285/459 (62%)
Query: 40 IMKEFEEKCRTPAAKLKQVADAMTVEMHAGLASEGGSKLKMIISYVDNLPTGDEKGTYYA 99
I+KE E+ C TP +L+QV DAM VEMHAGLASEGGSKLKM++++VD+LPTG EKGTYYA
Sbjct: 40 ILKELEDDCDTPVGRLRQVVDAMAVEMHAGLASEGGSKLKMLLTFVDDLPTGREKGTYYA 99
Query: 100 LDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQES 159
L LGGT FR+LRV LG + L Q+ IP HLM TS+ LF+++A L +F+ +E
Sbjct: 100 LHLGGTYFRILRVLLGDQRSYLDVQDVERHPIPSHLMNSTSEVLFNFLAFSLERFIEKE- 158
Query: 160 EEFKLSPGRQRELGFTFSFPVMQTSINTGTL------------VGRDVVEELSRAMAKQG 207
E S G +REL FTFSFPV TSI++G L VG+D+ E L A+ ++G
Sbjct: 159 ENGSDSQGVRRELAFTFSFPVKHTSISSGVLIKWTKGFEISEMVGQDIAECLQGALNRRG 218
Query: 208 LDMSVSALVNDTVGTLAGGRYTNKDVVAAVILGTGSNAAYVERAQAIPKWHGVPSKSGEM 267
LDM V+ALVNDTVG L+ G Y + D V AV+ GTGSNA Y+ER AI K G+ + SG M
Sbjct: 219 LDMHVAALVNDTVGALSLGYYHDPDTVVAVVFGTGSNACYLERTDAIIKCQGLLTTSGSM 278
Query: 268 VINMEWGDFRSSHLSLSEYDNALDAESLNPGEQIFEKMISGMYLGEIVRRVLLRMAQEAA 327
V+NMEWG+F SSHL + YD LDAES N + FEKMISGMYLG+IVRRV+LRM++++
Sbjct: 279 VVNMEWGNFWSSHLPRTSYDIDLDAESSNANDMGFEKMISGMYLGDIVRRVILRMSEDSD 338
Query: 328 FFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELC 387
FG + P L P+ LRT +SA+H D + +L+ V LKDI +S L +RK +V++C
Sbjct: 339 IFGP-ISPVLSEPYVLRTNSVSAIHEDDTPELQEVARILKDI-GVSDVPLKVRKLVVKIC 396
Query: 388 NXXXXXXXXXXXXXXXXXXKKMGRDAA---KDGD-------KQKTVIAMDGGLYEHYAEY 437
+ KK+GRD + G +++TV+A++GGLY +Y +
Sbjct: 397 DVVTRRAGRLAAAGIAGILKKIGRDGSGGITSGRSRSEIQMQKRTVVAVEGGLYMNYTMF 456
Query: 438 SKCXXXXXXXXXXXXXFKNIVIEHSNDGSGIGXXXXXXS 476
+ + +V++ DGS IG S
Sbjct: 457 REYMEEALVEILGEEVSQYVVVKAMEDGSSIGSALLVAS 495
|
|
| TAIR|locus:2202410 HXK3 "hexokinase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 950 (339.5 bits), Expect = 1.6e-95, P = 1.6e-95
Identities = 206/454 (45%), Positives = 281/454 (61%)
Query: 40 IMKEFEEKCRTPAAKLKQVADAMTVEMHAGLASEGGSKLKMIISYVDNLPTGDEKGTYYA 99
I+ +F++ C TP L+ VA+A+ +M GLA EGG L+MI+++VD LP+G+E+G +YA
Sbjct: 43 ILTKFQKDCATPTPYLRNVANAIADDMRDGLAVEGGGDLEMILTFVDALPSGNEEGLFYA 102
Query: 100 LDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQES 159
LDLGGTNFRV V LGGK ++ E ++SI LM GTS+ LF +IA++LA FV++E
Sbjct: 103 LDLGGTNFRVRSVQLGGKKERVLATESEQISISQKLMIGTSEELFGFIASKLANFVAKEK 162
Query: 160 E-EFKLSPGRQRELGFTFSFPVMQTSINTGTLV------------GRDVVEELSRAMAKQ 206
F L GR+RELGFTFSFPV QTSI++GTL G++VV L+ AM
Sbjct: 163 PGRFLLEEGRKRELGFTFSFPVKQTSIDSGTLSKWTKGFKVSGMEGKNVVACLNEAMEAH 222
Query: 207 GLDMSVSALVNDTVGTLAGGRYTNKDVVAAVILGTGSNAAYVERAQAIPKWHGVPSKSGE 266
GLDM VSALVND VGTLAG RY ++DV+ VILGTG+NA YVE+ AIPK S SG
Sbjct: 223 GLDMRVSALVNDGVGTLAGARYWDEDVMVGVILGTGTNACYVEQKHAIPKLRS-KSSSGT 281
Query: 267 MVINMEWGDFRSSHLSLSEYDNALDAESLNPGEQIFEKMISGMYLGEIVRRVLLRMAQEA 326
+IN EWG F S L + +D +D SLNPGE ++EKMISGMYLGEIVRRVLL M + +
Sbjct: 282 TIINTEWGGF-SKILPQTIFDLEMDETSLNPGEHLYEKMISGMYLGEIVRRVLLHMCETS 340
Query: 327 AFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVEL 386
FG P KL P ALRT + M D + DL+ V + L D L++ + +++ R+ +VE+
Sbjct: 341 DLFGHFAPAKLSTPLALRTEHLCKMQEDNTDDLRDVGSILYDFLDVEA-NMNARRRVVEV 399
Query: 387 CNXXXXXXXXXXXXXXXXXXKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCXXXXXX 446
C+ +K+ +D + G ++TV+AMDG LYE Y +Y +
Sbjct: 400 CDTVVKRGGRLAGAGIVAILEKIEKDTKRMGSGKRTVVAMDGALYEKYPQYRQYMQDALV 459
Query: 447 XXXXXXXFKNIVIEHSNDGSGIGXXXXXXSHSKY 480
++ I+H+ D SG+G ++S Y
Sbjct: 460 ELLGHKLASHVAIKHTKDVSGLGAALLAATNSIY 493
|
|
| TAIR|locus:2137564 HKL3 "AT4G37840" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 842 (301.5 bits), Expect = 4.4e-84, P = 4.4e-84
Identities = 180/448 (40%), Positives = 274/448 (61%)
Query: 40 IMKEFEEKCRTPAAKLKQVADAMTVEMHAGLASEGGSKLKMIISYVDNLPTGDEKGTYYA 99
I+++F +C TP +KL VADA+ +M A L +E L M++S+ +LP+GDEKG +Y
Sbjct: 41 ILRKFARECATPVSKLWAVADALVADMTASLTAECCGSLNMLVSFTGSLPSGDEKGVHYG 100
Query: 100 LDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQ-- 157
++L G +LR LGG + + + E+ IP ++ G+ L D+I+ EL KF++
Sbjct: 101 VNLRGKELLLLRGTLGGNEEPISDVQKHEIPIPDDVLNGSFKELCDFISLELVKFLAMNP 160
Query: 158 --ESEEFKLSPGRQRELGFTFSFPVMQ------TSINTGTLVG-------RDVVEELSRA 202
E+EE K LGFT + V Q +SI+ +L +D+V +++ +
Sbjct: 161 GGEAEEVK-------NLGFTLTRSVEQIGSHSISSIHRKSLANDDDEKVLKDLVNDMNES 213
Query: 203 MAKQGLDMSVS-ALVNDTVGTLAGGRYTNKDVVAAVILGTGSNAAYVERAQAIPKWHGVP 261
+ GL + ++ ALV++T+G LAGGRY +KD VAAV LG G+NAAY+E+AQ I +W
Sbjct: 214 LETHGLKIRMNTALVDNTIGELAGGRYYHKDTVAAVSLGMGTNAAYIEQAQEISRWKSAI 273
Query: 262 SKSGEMVINMEWGDFRSSHLSLSEYDNALDAESLNPGEQIFEKMISGMYLGEIVRRVLLR 321
+ E+V++ EWGDFRS HL ++E+D +LDAESLNPG +IFEKM+SG YLGEIVRRVLL+
Sbjct: 274 REPQEIVVSTEWGDFRSCHLPITEFDASLDAESLNPGHRIFEKMVSGRYLGEIVRRVLLK 333
Query: 322 MAQEAAFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRK 381
M++E+A FGDT+PPKL +P+ L +PDM+AMH D S + + V KLK++ I ++L+ R+
Sbjct: 334 MSEESALFGDTLPPKLTIPYILWSPDMAAMHQDISEERETVNKKLKEVFGIMDSTLAARE 393
Query: 382 TIVELCNXXXXXXXXXXXXXXXXXXKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCX 441
+VE+C+ KK+GR +K+ +++ ++GGLY+HY +
Sbjct: 394 VVVEVCDVVAERAARLAGAGIVGMIKKLGRL-----EKKMSIVIVEGGLYDHYRVFRNYL 448
Query: 442 XXXXXXXXXXXXFKNIVIEHSNDGSGIG 469
++VIEHS+ GS G
Sbjct: 449 HSSVWEMLGDELSDHVVIEHSHGGSAAG 476
|
|
| POMBASE|SPAC24H6.04 hxk1 "hexokinase 1" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
Identities = 149/455 (32%), Positives = 222/455 (48%)
Query: 41 MKEFEEKCRTPAAKLKQVADAMTVEMHAGLASEGGSKLKMIISYVDNLPTGDEKGTYYAL 100
+ E EE+ P L +V D E++ GL + G + M+ +++ P G+E G+Y AL
Sbjct: 31 LDELEEQFTIPTELLHRVTDRFVSELYKGLTTNPGD-VPMVPTWIIGTPDGNEHGSYLAL 89
Query: 101 DLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESE 160
DLGGTN RV V + G G I Q ++ +P L GT +ALFDYIA + KFV E
Sbjct: 90 DLGGTNLRVCAVEVQGNGKFDITQ--SKYRLPQELKVGTREALFDYIADCIKKFV----E 143
Query: 161 EFKLSPGRQRELGFTFSFPVMQTSINTGTLV----GRDV--VEE------LSRAMAKQGL 208
E + E+GFTFS+P +Q SIN +LV G D+ VE LS A+ + G
Sbjct: 144 EVHPGKSQNLEIGFTFSYPCVQRSINDASLVAWTKGFDIDGVEGESVGPLLSAALKRVGC 203
Query: 209 D-MSVSALVNDTVGTLAGGRYTNKDVVAAVILGTGSNAAYVERAQAIPKWHGVP-SKSGE 266
+ + ++A+++DT GTL Y + VI GTG NA Y+E+ IPK H +
Sbjct: 204 NNVRLNAILSDTTGTLVASNYASPGTEIGVIFGTGCNACYIEKFSEIPKLHKYDFPEDMN 263
Query: 267 MVINMEWGDFRSSHLSL--SEYDNALDAESLNPGEQIFEKMISGMYLGEIVRRVLLRMAQ 324
M+IN EW DF + H+ L ++YD A+D ES PG Q +EKMI+G YLG+I+RR+LL + +
Sbjct: 264 MIINCEWCDFDNQHVVLPRTKYDVAIDEESPRPGLQTYEKMIAGCYLGDILRRILLDLYE 323
Query: 325 EAAFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIV 384
+ A F K+ P A+ T +SA+ D +L +T ++ + +T R+ I
Sbjct: 324 QGALFNGQDVTKIRDPLAMDTSVLSAIEVDPFENLDETQTLFEETYGLKTTE-EERQFIR 382
Query: 385 ELCNXXXXXXXXXXXXXXXXXXKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCXXXX 444
C +KM +K ++ DG +Y Y +
Sbjct: 383 RACELIGTRSARLSACGVCALVRKM--------NKPSMIVGTDGSVYNLYPRFKDRLAQA 434
Query: 445 XXXXXXXXXFKNIVIEHSNDGSGIGXXXXXXSHSK 479
+V + DGSG+G +K
Sbjct: 435 FKDILGEEIGSKVVTIPAEDGSGVGAALVSALEAK 469
|
|
| CGD|CAL0000198 HXK2 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
|---|
Score = 540 (195.1 bits), Expect = 4.4e-52, P = 4.4e-52
Identities = 158/467 (33%), Positives = 224/467 (47%)
Query: 41 MKEFEEKCRTPAAKLKQVADAMTVEMHAGLASEGGSKLKMIISYVDNLPTGDEKGTYYAL 100
+K +E+ A KL+ + E+ GL+ GG+ + MI +V + PTG E G+Y A+
Sbjct: 27 LKPIQEQFTISADKLRAIVKHFISELDRGLSKAGGN-IPMIPGWVMDFPTGKETGSYLAI 85
Query: 101 DLGGTNFRVLRVHLGG-KGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQES 159
DLGGTN RV+ V LGG + +FA +P H+ T TSD L+D+IA L +FV +
Sbjct: 86 DLGGTNLRVVLVKLGGNRDFDTTQSKFA---LPAHMRTATSDELWDFIAKCLKEFVDEIY 142
Query: 160 EEFKLSPGRQRELGFTFSFPVMQTSINTGTLV------------GRDVVEELSRAMAKQG 207
+ P LGFTFS+P Q IN G L G+DVV L +A+ K G
Sbjct: 143 PDGCSEP---LPLGFTFSYPASQNRINEGILQRWTKGWSIDGIEGKDVVPMLQKAIKKVG 199
Query: 208 LDMSVSALVNDTVGTLAGGRYTNKDVVAAVILGTGSNAAYVERAQAIPKWHG-----VPS 262
+ + V AL+NDT GTL YT+ + +I GTG N AY + + IPK G +P
Sbjct: 200 VPIDVVALINDTTGTLVASMYTDPEAKMGLIFGTGVNGAYFDVVKDIPKLEGKCPSDIPP 259
Query: 263 KSGEMVINMEWGDFRSSHLSL--SEYDNALDAESLNPGEQIFEKMISGMYLGEIVRRVLL 320
+S M IN E+G F + L ++YD +D ES PG+Q FEKMISG YLGE++R +LL
Sbjct: 260 ES-PMAINCEYGSFDNEKYILPRTKYDVQIDEESPRPGQQTFEKMISGYYLGEVLRLILL 318
Query: 321 RMAQEAA--FFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLS 378
A+E F G + KL+VP+ + S + D +L V ++ L I +T
Sbjct: 319 EFAEEKKLIFKGQNLD-KLKVPYVMDASYPSKIEEDPFENLSDVADLFREKLGIETTEPE 377
Query: 379 MRKTIVELCNXXXXXXXXXXXXXXXXXXKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYS 438
RK I L +K G A A DG +Y Y +
Sbjct: 378 -RKIIRCLAELIGERSARFSVCGIAAICQKRGYKTAH--------CAADGSVYNKYPGFK 428
Query: 439 -KCXXXXXXXXXXXXXFKN-IVIEHSNDGSGIGXXXXXXSHSKYLQD 483
+ K+ I+I + DGSG+G K L++
Sbjct: 429 ERTAQALRDIYEWPADVKDPIIIVPAEDGSGVGAAVIAALTEKRLKE 475
|
|
| UNIPROTKB|F1PAZ2 HK2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 528 (190.9 bits), Expect = 4.3e-50, P = 4.3e-50
Identities = 137/403 (33%), Positives = 210/403 (52%)
Query: 55 LKQVADAMTVEMHAGLAS--EGGSKLKMIISYVDNLPTGDEKGTYYALDLGGTNFRVLRV 112
L +++ EM GL + + +KM+ ++V + P G E G + ALDLGGTNFRVLRV
Sbjct: 8 LLEISKRFRKEMEKGLGATTHPTASVKMLPTFVRSTPDGTEHGEFLALDLGGTNFRVLRV 67
Query: 113 HLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQREL 172
+ G+ + E +IP LM G+ LFD+IA LA F+ + + K P L
Sbjct: 68 RVTDNGLQKVEMENQIYAIPEDLMRGSGTQLFDHIAECLANFMDKLQIKDKKLP-----L 122
Query: 173 GFTFSFPVMQTSINTGTLV------------GRDVVEELSRAMAKQG-LDMSVSALVNDT 219
GFTFSFP +QT ++ LV G+DVV + +A+ ++G D+ + A+VNDT
Sbjct: 123 GFTFSFPCVQTKLDESFLVSWTKGFKSSGVEGKDVVTLIRKAIQRRGDFDIDIVAVVNDT 182
Query: 220 VGTLAGGRYTNKDVVAAVILGTGSNAAYVERAQAIPKWHGVPSKSGEMVINMEWGDFRSS 279
VGT+ Y +++ +I+GTGSNA Y+E + I G G M INMEWG F
Sbjct: 183 VGTMMTCGYDDQNCEIGLIVGTGSNACYMEEMRHIDMVEG---DEGRMCINMEWGAFGDD 239
Query: 280 HLS---LSEYDNALDAESLNPGEQIFEKMISGMYLGEIVRRVLLRMAQEAAFFGDTVPPK 336
+ +E+D +D SLNPG+Q+FEKMISGMY+GE+VR +L++MA+E FG + P
Sbjct: 240 GILDDFRTEFDQEIDMGSLNPGKQLFEKMISGMYMGELVRLILVKMAKEELLFGGKLSPG 299
Query: 337 LEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELCNXXXXXXXX 396
L T D+S + + K E ++ L I T T +C
Sbjct: 300 LLATGQFETKDVSDIEGEKDGIRKAREVLVR--LGIDPTQEDCVATH-RVCQIVSTRSAS 356
Query: 397 XXXXXXXXXXKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSK 439
+++ + K ++ ++ I +DG +Y+ + ++K
Sbjct: 357 LCAATLAAVLRRIKEN--KGEERLRSTIGVDGSVYKKHPHFAK 397
|
|
| UNIPROTKB|G5EHQ5 MGCH7_ch7g833 "Glucokinase" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
|---|
Score = 306 (112.8 bits), Expect = 5.6e-49, Sum P(2) = 5.6e-49
Identities = 87/295 (29%), Positives = 139/295 (47%)
Query: 191 VGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRYTN---KDVVAAVILGTGSNAAY 247
VG+DV L + K L + V+ALVNDTVGTL YT+ K + I GTG+N AY
Sbjct: 182 VGKDVCALLQAELDKLKLPVKVAALVNDTVGTLMARAYTSPSKKGTILGAIFGTGTNGAY 241
Query: 248 VERAQAIPKW-HGVP--SKSGEMVINMEWGDFRS--SHLSLSEYDNALDAESLNPGEQIF 302
+E+ +I K G +GEM+IN EWG F + + L + +D+ALD ES NPG Q+F
Sbjct: 242 MEKYDSIKKGLKGADYVDTTGEMIINAEWGSFDNQLNVLPSTPWDDALDRESNNPGVQMF 301
Query: 303 EKMISGMYLGEIVRRVLLRMAQ--EAAFFG----DTVPPKLEVPFALRTPDMSAMHHDTS 356
EK +SGM+LGEI+R+ ++ + + F ++ +L + + + MS D +
Sbjct: 302 EKRVSGMFLGEILRQAVVDAVKNDKVQLFKQVQVNSSSSRLFTSYGVDSAIMSDAAEDNT 361
Query: 357 SDLKVVETKLKDILEISSTSLSMRKTIVELCNXXXXXXXXXXXXXXXXXXKKMGRDAAKD 416
+L + KL + ++ S+ + + K G+ D
Sbjct: 362 PELATLRKKLSSEVGLNDVSVEDAQAFKAISAAVGRRAARLSAVAVAAVVLKTGKLTHPD 421
Query: 417 GDKQKTVIAMDGGLYEHYAEYSKCXXXXXXXXXXXXX--FKNIVIEHSNDGSGIG 469
++ I +DG L++ Y ++ + I I + DGSG+G
Sbjct: 422 WKGEQIDIGVDGSLFQFYPQFPDMIYEALRVIDGIGEKGAEQITIGLTQDGSGVG 476
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q9SQ76 | HXK2_SOLTU | 2, ., 7, ., 1, ., 1 | 0.7347 | 0.9566 | 0.9334 | N/A | no |
| P93834 | HXK2_ARATH | 2, ., 7, ., 1, ., 1 | 0.6754 | 1.0 | 0.9641 | yes | no |
| O64390 | HXK1_SOLTU | 2, ., 7, ., 1, ., 1 | 0.6593 | 0.9958 | 0.9678 | N/A | no |
| Q9SEK3 | HXK1_SPIOL | 2, ., 7, ., 1, ., 1 | 0.6942 | 0.9483 | 0.9216 | N/A | no |
| Q9SEK2 | HXK1_TOBAC | 2, ., 7, ., 1, ., 1 | 0.7157 | 1.0 | 0.9738 | N/A | no |
| Q6Q8A5 | HXK2_TOBAC | 2, ., 7, ., 1, ., 1 | 0.5842 | 0.9132 | 0.8857 | N/A | no |
| P04807 | HXKB_YEAST | 2, ., 7, ., 1, ., 1 | 0.3348 | 0.8140 | 0.8106 | yes | no |
| Q9NFT7 | HXK2_DROME | 2, ., 7, ., 1, ., 1 | 0.3370 | 0.8243 | 0.8209 | yes | no |
| Q8LQ68 | HXK6_ORYSJ | 2, ., 7, ., 1, ., 1 | 0.6541 | 0.9090 | 0.8695 | yes | no |
| Q09756 | HXK1_SCHPO | 2, ., 7, ., 1, ., 1 | 0.3566 | 0.8698 | 0.8698 | yes | no |
| P33284 | HXK_KLULA | 2, ., 7, ., 1, ., 1 | 0.3552 | 0.8491 | 0.8474 | yes | no |
| Q2KNB9 | HXK2_ORYSJ | 2, ., 7, ., 1, ., 1 | 0.6526 | 0.9545 | 0.9352 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| estExt_fgenesh4_pg.C_LG_I1452 | hexokinase (EC-2.7.1.1) (495 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| gw1.VIII.2574.1 | glucose-6-phosphate isomerase (EC-5.3.1.9) (569 aa) | • | • | • | 0.919 | ||||||
| fgenesh4_pg.C_LG_IV000576 | mannose-6-phosphate isomerase (EC-5.3.1.8) (440 aa) | • | 0.905 | ||||||||
| gw1.II.3030.1 | glucose-6-phosphate isomerase (EC-5.3.1.9) (542 aa) | • | • | 0.902 | |||||||
| estExt_fgenesh4_pg.C_LG_XV1054 | phosphoglucomutase (EC-5.4.2.2) (551 aa) | • | • | 0.901 | |||||||
| estExt_fgenesh4_pm.C_LG_VIII0571 | phosphoglucomutase (EC-5.4.2.2) (582 aa) | • | • | 0.901 | |||||||
| estExt_fgenesh4_pg.C_LG_X0989 | phosphoglucomutase (EC-5.4.2.2) (582 aa) | • | • | 0.901 | |||||||
| estExt_fgenesh4_pg.C_LG_XIV0248 | SubName- Full=Putative uncharacterized protein; (247 aa) | • | 0.900 | ||||||||
| estExt_Genewise1_v1.C_17140001 | phosphomannomutase (EC-5.4.2.8) (229 aa) | • | 0.900 | ||||||||
| estExt_fgenesh4_pg.C_LG_IX0868 | hypothetical protein (498 aa) | • | • | 0.900 | |||||||
| eugene3.00121193 | phosphoglucomutase (EC-5.4.2.2) (631 aa) | • | • | 0.900 | |||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 484 | |||
| PLN02405 | 497 | PLN02405, PLN02405, hexokinase | 0.0 | |
| PLN02914 | 490 | PLN02914, PLN02914, hexokinase | 0.0 | |
| PLN02362 | 509 | PLN02362, PLN02362, hexokinase | 0.0 | |
| PLN02596 | 490 | PLN02596, PLN02596, hexokinase-like | 0.0 | |
| PTZ00107 | 464 | PTZ00107, PTZ00107, hexokinase; Provisional | 8e-98 | |
| COG5026 | 466 | COG5026, COG5026, Hexokinase [Carbohydrate transpo | 2e-96 | |
| pfam03727 | 238 | pfam03727, Hexokinase_2, Hexokinase | 1e-70 | |
| pfam00349 | 205 | pfam00349, Hexokinase_1, Hexokinase | 2e-52 | |
| cd00012 | 185 | cd00012, NBD_sugar-kinase_HSP70_actin, Nucleotide- | 7e-06 |
| >gnl|CDD|215226 PLN02405, PLN02405, hexokinase | Back alignment and domain information |
|---|
Score = 867 bits (2243), Expect = 0.0
Identities = 374/496 (75%), Positives = 425/496 (85%), Gaps = 12/496 (2%)
Query: 1 MGRVTVVVVCCAALAAGVAAAVVVCRRVKRGGKCGKANGIMKEFEEKCRTPAAKLKQVAD 60
MG+V V A A AAA+VV RR+K GK +A I+KEFEE C TP KL+QVAD
Sbjct: 1 MGKVAVGAAVVCAAAVCAAAALVVRRRMKSSGKWARAMEILKEFEEDCATPIGKLRQVAD 60
Query: 61 AMTVEMHAGLASEGGSKLKMIISYVDNLPTGDEKGTYYALDLGGTNFRVLRVHLGGKGVG 120
AMTVEMHAGLASEGGSKLKM+ISYVDNLP+GDEKG +YALDLGGTNFRVLRV LGGK
Sbjct: 61 AMTVEMHAGLASEGGSKLKMLISYVDNLPSGDEKGLFYALDLGGTNFRVLRVLLGGKDGR 120
Query: 121 LINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGFTFSFPV 180
++ QEF EVSIPPHLMTG+SDALFD+IAA LAKFV+ E E+F L PGRQRELGFTFSFPV
Sbjct: 121 VVKQEFEEVSIPPHLMTGSSDALFDFIAAALAKFVATEGEDFHLPPGRQRELGFTFSFPV 180
Query: 181 MQTSINTGTL------------VGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRY 228
QTSI++GTL VG+DVV EL++AM + GLDM VSALVNDT+GTLAGGRY
Sbjct: 181 KQTSISSGTLIKWTKGFSIDDAVGQDVVGELTKAMERVGLDMRVSALVNDTIGTLAGGRY 240
Query: 229 TNKDVVAAVILGTGSNAAYVERAQAIPKWHGVPSKSGEMVINMEWGDFRSSHLSLSEYDN 288
N DVVAAVILGTG+NAAYVERAQAIPKWHG+ KSGEMVINMEWG+FRSSHL L+EYD+
Sbjct: 241 YNPDVVAAVILGTGTNAAYVERAQAIPKWHGLLPKSGEMVINMEWGNFRSSHLPLTEYDH 300
Query: 289 ALDAESLNPGEQIFEKMISGMYLGEIVRRVLLRMAQEAAFFGDTVPPKLEVPFALRTPDM 348
ALD ESLNPGEQIFEK+ISGMYLGEI+RRVLL+MA+EAAFFGDTVPPKL++PF LRTPDM
Sbjct: 301 ALDVESLNPGEQIFEKIISGMYLGEILRRVLLKMAEEAAFFGDTVPPKLKIPFILRTPDM 360
Query: 349 SAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELCNIVATRGARLAAAGILGVLKK 408
SAMHHDTS DLKVV +KLKDILEI +TSL MRK +VELCNIVATRGARL+AAGI G+LKK
Sbjct: 361 SAMHHDTSPDLKVVGSKLKDILEIPNTSLKMRKVVVELCNIVATRGARLSAAGIYGILKK 420
Query: 409 MGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVIEHSNDGSGI 468
+GRD KDG+KQK+VIAMDGGL+EHY E+SKC+E+TL+ELLGEE+ ++I +EHSNDGSGI
Sbjct: 421 LGRDTVKDGEKQKSVIAMDGGLFEHYTEFSKCMESTLKELLGEEVSESIEVEHSNDGSGI 480
Query: 469 GAALLAASHSKYLQDE 484
GAALLAASHS YL+ E
Sbjct: 481 GAALLAASHSLYLEVE 496
|
Length = 497 |
| >gnl|CDD|178502 PLN02914, PLN02914, hexokinase | Back alignment and domain information |
|---|
Score = 569 bits (1469), Expect = 0.0
Identities = 265/453 (58%), Positives = 331/453 (73%), Gaps = 14/453 (3%)
Query: 40 IMKEFEEKCRTPAAKLKQVADAMTVEMHAGLASEGGSKLKMIISYVDNLPTGDEKGTYYA 99
I+ + ++ C TP L+ VADAM +M AGLA +GG LKMI+SYVD+LP+G+EKG +YA
Sbjct: 40 ILTKLQKDCATPLPVLRHVADAMAADMRAGLAVDGGGDLKMILSYVDSLPSGNEKGLFYA 99
Query: 100 LDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQES 159
LDLGGTNFRVLRV LGGK +I EF +VSIP LM GTS+ LFD+IA+ LA FV++E
Sbjct: 100 LDLGGTNFRVLRVQLGGKDERVIATEFEQVSIPQELMFGTSEELFDFIASGLANFVAKEG 159
Query: 160 EEFKLSPGRQRELGFTFSFPVMQTSINTGTLV------------GRDVVEELSRAMAKQG 207
+F L GR+RE+GFTFSFPV QTSI++G L+ G+DVV L+ AM +QG
Sbjct: 160 GKFHLPEGRKREIGFTFSFPVKQTSIDSGILMKWTKGFAVSGTAGKDVVACLNEAMERQG 219
Query: 208 LDMSVSALVNDTVGTLAGGRYTNKDVVAAVILGTGSNAAYVERAQAIPKWHGVPSKSGEM 267
LDM VSALVNDTVGTLAG RY + DV+ AVILGTG+NA YVER AIPK G S SG
Sbjct: 220 LDMRVSALVNDTVGTLAGARYWDDDVMVAVILGTGTNACYVERTDAIPKLQGQKSSSGRT 279
Query: 268 VINMEWGDFRSSHLSLSEYDNALDAESLNPGEQIFEKMISGMYLGEIVRRVLLRMAQEAA 327
+IN EWG F S L L+E+D +DA S+NPGEQIFEK ISGMYLGEIVRRVLL+MA+ +
Sbjct: 280 IINTEWGAF-SDGLPLTEFDREMDAASINPGEQIFEKTISGMYLGEIVRRVLLKMAETSD 338
Query: 328 FFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELC 387
FG VP KL PFALRTP + AM D S DL+ V + L D+L + + SLS R+ +VE+C
Sbjct: 339 LFGHFVPEKLSTPFALRTPHLCAMQQDNSDDLQAVGSILYDVLGVEA-SLSARRRVVEVC 397
Query: 388 NIVATRGARLAAAGILGVLKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEE 447
+ + RG RLA AGI+G+L+KM D+ ++TV+AMDGGLYE Y +Y + +++ + E
Sbjct: 398 DTIVKRGGRLAGAGIVGILEKMEEDSKGMIFGKRTVVAMDGGLYEKYPQYRRYMQDAVTE 457
Query: 448 LLGEELFKNIVIEHSNDGSGIGAALLAASHSKY 480
LLG EL KNI IEH+ DGSGIGAALLAA++SKY
Sbjct: 458 LLGLELSKNIAIEHTKDGSGIGAALLAATNSKY 490
|
Length = 490 |
| >gnl|CDD|215206 PLN02362, PLN02362, hexokinase | Back alignment and domain information |
|---|
Score = 569 bits (1467), Expect = 0.0
Identities = 273/505 (54%), Positives = 356/505 (70%), Gaps = 23/505 (4%)
Query: 1 MGRVTVVVVCCAALAAGVAAAVVVCRRVKRGGKCGKANGIMKEFEEKCRTPAAKLKQVAD 60
MG+V V + AA+AA AAV+V RRVK K + G++KE EE C TP +L+QV D
Sbjct: 1 MGKVAVGLAAAAAVAACAVAAVMVGRRVKSRRKWRRVVGVLKELEEACETPVGRLRQVVD 60
Query: 61 AMTVEMHAGLASEGGSKLKMIISYVDNLPTGDEKGTYYALDLGGTNFRVLRVHLGGKGVG 120
AM VEMHAGLASEGGSKLKM++++VD+LPTG E GTYYALDLGGTNFRVLRV LGG+
Sbjct: 61 AMAVEMHAGLASEGGSKLKMLLTFVDDLPTGSEIGTYYALDLGGTNFRVLRVQLGGQRSS 120
Query: 121 LINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGFTFSFPV 180
+++Q+ IP HLM TS+ LFD+IA+ L +FV +E + S R+RELGFTFSFPV
Sbjct: 121 ILSQDVERHPIPQHLMNSTSEVLFDFIASSLKQFVEKEENGSEFSQVRRRELGFTFSFPV 180
Query: 181 MQTSINTGTL------------VGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRY 228
QTSI++G L VG+DV E L A+ ++GLDM V+ALVNDTVGTLA G Y
Sbjct: 181 KQTSISSGILIKWTKGFAISDMVGKDVAECLQGALNRRGLDMRVAALVNDTVGTLALGHY 240
Query: 229 TNKDVVAAVILGTGSNAAYVERAQAIPKWHGVPSKSGEMVINMEWGDFRSSHLSLSEYDN 288
+ D VAAVI+GTG+NA Y+ER AI K G+ + SG MV+NMEWG+F SSHL + YD
Sbjct: 241 HDPDTVAAVIIGTGTNACYLERTDAIIKCQGLLTTSGSMVVNMEWGNFWSSHLPRTSYDI 300
Query: 289 ALDAESLNPGEQIFEKMISGMYLGEIVRRVLLRMAQEAAFFGDTVPPKLEVPFALRTPDM 348
LDAES NP +Q FEKMISGMYLG+IVRRV+LRM+QE+ FG V +L PF LRTP +
Sbjct: 301 DLDAESPNPNDQGFEKMISGMYLGDIVRRVILRMSQESDIFG-PVSSRLSTPFVLRTPSV 359
Query: 349 SAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELCNIVATRGARLAAAGILGVLKK 408
+AMH D S +L+ V LK+ L IS L +RK +V++C++V R ARLAAAGI+G+LKK
Sbjct: 360 AAMHEDDSPELQEVARILKETLGISEVPLKVRKLVVKICDVVTRRAARLAAAGIVGILKK 419
Query: 409 MGRDA----------AKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIV 458
+GRD + ++TV+A++GGLY +Y + + L L E+LGE++ ++++
Sbjct: 420 IGRDGSGGITSGRSRSDIQIMRRTVVAVEGGLYTNYTMFREYLHEALNEILGEDVAQHVI 479
Query: 459 IEHSNDGSGIGAALLAASHSKYLQD 483
++ + DGSGIG+ALLAAS+S Y D
Sbjct: 480 LKATEDGSGIGSALLAASYSSYSVD 504
|
Length = 509 |
| >gnl|CDD|178206 PLN02596, PLN02596, hexokinase-like | Back alignment and domain information |
|---|
Score = 519 bits (1339), Expect = 0.0
Identities = 249/488 (51%), Positives = 339/488 (69%), Gaps = 17/488 (3%)
Query: 1 MGRVTVVVVCCAALAAGVAAAVVVCRRVKRGGKCGK-ANGIMKEFEEKCRTPAAKLKQVA 59
M R VVV A A VAAAV++ R +R + K I+++F +C TP +KL +VA
Sbjct: 1 MMRKEVVVAATVATVAAVAAAVLMGRWKRRKERQWKHTQRILRKFARECATPVSKLWEVA 60
Query: 60 DAMTVEMHAGLASEGGSKLKMIISYVDNLPTGDEKGTYYALDLGGTNFRVLRVHLGGKGV 119
DA+ +M A L +E + L M++SYV +LP+GDEKG YY L+L G+NF +LR LGGK
Sbjct: 61 DALVSDMTASLTAEETTTLNMLVSYVASLPSGDEKGLYYGLNLRGSNFLLLRARLGGKNE 120
Query: 120 GLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGFTFSFP 179
+ + E+SIP +++ GTS LFDYIA ELAKFV++ + +P R ++LGFT S+P
Sbjct: 121 PISDLYREEISIPSNVLNGTSQELFDYIALELAKFVAEHPGDEADTPERVKKLGFTVSYP 180
Query: 180 VMQTSINTGTL-----------VGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRY 228
V Q + ++G+ VG+ +V +++RA+ K GL + V ALV+DT+G LAGGRY
Sbjct: 181 VDQAAASSGSAIKWKSFSADDTVGKALVNDINRALEKHGLKIRVFALVDDTIGNLAGGRY 240
Query: 229 TNKDVVAAVILGTGSNAAYVERAQAIPKWHGVPSKSGEMVINMEWGDFRSSHLSLSEYDN 288
NKD VAAV LG G+NAAYVE AQAIPKW +S E+VI+ EWG+F S HL ++E+D
Sbjct: 241 YNKDTVAAVTLGMGTNAAYVEPAQAIPKWQSPSPESQEIVISTEWGNFNSCHLPITEFDA 300
Query: 289 ALDAESLNPGEQIFEKMISGMYLGEIVRRVLLRMAQEAAFFGDTVPPKLEVPFALRTPDM 348
+LDAES NPG +IFEK+ SGMYLGEIVRRVLL+MA+E A FGDT+PPKL P+ LR+PDM
Sbjct: 301 SLDAESSNPGSRIFEKLTSGMYLGEIVRRVLLKMAEETALFGDTLPPKLTTPYLLRSPDM 360
Query: 349 SAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELCNIVATRGARLAAAGILGVLKK 408
+AMH DTS D +VV KLK+I I+ ++ R+ + E+C+IVA RGARLA AGI+G++KK
Sbjct: 361 AAMHQDTSEDHEVVNEKLKEIFGITDSTPMAREVVAEVCDIVAERGARLAGAGIVGIIKK 420
Query: 409 MGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVIEHSNDGSGI 468
+GR + +K+V+ ++GGLYEHY + L +++ E+LG EL N+VIEHS+ GSG
Sbjct: 421 LGRI-----ENKKSVVTVEGGLYEHYRVFRNYLHSSVWEMLGSELSDNVVIEHSHGGSGA 475
Query: 469 GAALLAAS 476
GA LAA
Sbjct: 476 GALFLAAC 483
|
Length = 490 |
| >gnl|CDD|240270 PTZ00107, PTZ00107, hexokinase; Provisional | Back alignment and domain information |
|---|
Score = 301 bits (774), Expect = 8e-98
Identities = 155/472 (32%), Positives = 226/472 (47%), Gaps = 61/472 (12%)
Query: 41 MKEFEEKCRTPAAKLKQVADAMTVEMHAGLASEGG---------SKLKMIISYVDNLPTG 91
+ + KLK++ D E+ GL + KM+ S V NLPTG
Sbjct: 11 LASLVNQFTMSKEKLKELVDYFLYELVEGLEAHRRHRNLWIPNECSFKMLDSCVYNLPTG 70
Query: 92 DEKGTYYALDLGGTNFRVLRVHLGGKGVGLINQE-----FAEVSIPPHLMTGTSDA--LF 144
EKG YYA+D GGTNFR +RV L G G Q + + L+ + A LF
Sbjct: 71 KEKGVYYAIDFGGTNFRAVRVSLRGGGKMERTQSKFSLPKSALLGEKGLLDKKATATDLF 130
Query: 145 DYIAAELAKFVSQESEEFKLSPGRQRELGFTFSFPVMQTSINTGTLV------------- 191
D+IA + K + + + + +GFTFSFP Q S+N L+
Sbjct: 131 DHIAKSIKKMMEENGDP--EDLNKPVPVGFTFSFPCTQLSVNNAILIDWTKGFETGRATN 188
Query: 192 ----GRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRY----TNKDVVAAVILGTGS 243
G+DV E L+ A + + +V A++NDTVGTL Y VI+GTGS
Sbjct: 189 DPVEGKDVGELLNDAFKRNNVPANVVAVLNDTVGTLISCAYQKPKNTPPCQVGVIIGTGS 248
Query: 244 NAAYVERAQAIPKWHGVPSKSGEMVINMEWGDFRSSHLSLSEYDNALDAESLNPGEQIFE 303
NA Y E + + G P INME G+F S L ++ YD +D + N G Q FE
Sbjct: 249 NACYFEPEVSAYGYAGTP-------INMECGNF-DSKLPITPYDLEMDWYTPNRGRQQFE 300
Query: 304 KMISGMYLGEIVRRVLLRMAQEAAFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVE 363
KMISG YLGEI RR+++ + Q A PPK+ + + D S + +D S DL+
Sbjct: 301 KMISGAYLGEISRRLIVHLLQLKA------PPKMWQSGSFESEDASMILNDQSPDLQFSR 354
Query: 364 TKLKDILEISSTSLSMRKTIVELCNIVATRGARLAAAGILGVLKKMGRDAAKDGDKQKTV 423
+K+ ++ T + TI ++C +V R A+LAAA I KK + K
Sbjct: 355 QVIKEAWDVDLTDEDLY-TIRKICELVRGRAAQLAAAFIAAPAKKTRT------VQGKAT 407
Query: 424 IAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVIEHSNDGSGIGAALLAA 475
+A+DG +Y + + L+ + +LG + N+V ++DGSG GAA++AA
Sbjct: 408 VAIDGSVYVKNPWFRRLLQEYINSILGPDA-GNVVFYLADDGSGKGAAIIAA 458
|
Length = 464 |
| >gnl|CDD|227359 COG5026, COG5026, Hexokinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 298 bits (766), Expect = 2e-96
Identities = 169/454 (37%), Positives = 234/454 (51%), Gaps = 30/454 (6%)
Query: 42 KEFEEKCRTPAAKLKQVADAMTVEMHAGLASEGGSKLKMIISYVDNLPTGDEKGTYYALD 101
+E E P L++V A E+ GL + G L MI ++V LPTG+E G+ A+D
Sbjct: 22 EELVESFTVPTEDLREVVKAFIEELEKGLQPKSGDFLPMIPTWVAPLPTGNESGSVLAID 81
Query: 102 LGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTG-TSDALFDYIAAELAKFVSQESE 160
LGGTN RV V LGG G + E ++ +P + D LF +IA LA F+ ++
Sbjct: 82 LGGTNLRVCLVVLGGDGT--FDIEQSKSFLPVECRDSESRDELFGFIADRLAAFIKEQHP 139
Query: 161 EFKLSPGRQRELGFTFSFPVMQTSINTGTL------------VGRDVVEELSRAMAKQGL 208
G + +GFTFS+P+ QTSIN G L +G DVV L A++ + L
Sbjct: 140 SGY---GSKLPIGFTFSYPLNQTSINEGQLIRWTKGFDIPEVIGTDVVRLLQEALSARNL 196
Query: 209 DMSVSALVNDTVGTLAGGRYTNKDVVAAVILGTGSNAAYVERAQAIPKWHGVPSK-SGEM 267
+ V A++NDT GTL YT+ + + +I GTG+N Y E IPK +G M
Sbjct: 197 PIRVVAVINDTTGTLLASVYTSSETIIGIIFGTGTNGCYCEPKGRIPKLPRDDLPETGPM 256
Query: 268 VINMEWGDFRS--SHLSLSEYDNALDAESLNPGEQIFEKMISGMYLGEIVRRVLLRMAQE 325
+IN EWG F + S L ++YD +D ES NPG QIFEKM SGMYLGE++R +L + ++
Sbjct: 257 LINCEWGSFDNELSVLPRTKYDVLIDQESPNPGHQIFEKMSSGMYLGELLRLILRNLYEQ 316
Query: 326 AAFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVE 385
F P KL PFAL T +S + D +L+ T + +T RK I
Sbjct: 317 GLIFNGQDPEKLTDPFALSTSVLSRIEEDPFENLRNTLTTFLNDFRAPTT-KEERKLIRR 375
Query: 386 LCNIVATRGARLAAAGILGVLKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTL 445
L ++ R ARLAA I ++ K G + + DG + E Y + L L
Sbjct: 376 LVELIGRRAARLAAVPIAAIVIKTGA-------YKAYHVGADGSVIERYPGFRSMLREAL 428
Query: 446 EELLGEELFKNIVIEHSNDGSGIGAALLAASHSK 479
+ LLGEE K I I+ + DGSG+GAAL A K
Sbjct: 429 KALLGEEGEK-IKIKPAEDGSGLGAALCALLAQK 461
|
Length = 466 |
| >gnl|CDD|202746 pfam03727, Hexokinase_2, Hexokinase | Back alignment and domain information |
|---|
Score = 224 bits (573), Expect = 1e-70
Identities = 97/241 (40%), Positives = 140/241 (58%), Gaps = 12/241 (4%)
Query: 237 VILGTGSNAAYVERAQAIPKWHGVPSKSGEMVINMEWGDFRSSHLSL--SEYDNALDAES 294
+I+GTG+NA Y+E + I K G G M INMEWG F + HL L ++YD +D ES
Sbjct: 6 LIVGTGTNACYMEEMRNIEKLEG---DDGRMCINMEWGAFDNGHLDLPRTKYDVVIDEES 62
Query: 295 LNPGEQIFEKMISGMYLGEIVRRVLLRMAQEAAFFGDTVPPKLEVPFALRTPDMSAMHHD 354
NPG+Q FEKMISGMYLGEIVR +LL +A++ F PKL P + T +S + D
Sbjct: 63 PNPGQQRFEKMISGMYLGEIVRLILLDLAKQGLLFKGQDSPKLLTPGSFETSVLSRIESD 122
Query: 355 TSSDLKVVETKLKDILEISSTSLSMRKTIVELCNIVATRGARLAAAGILGVLKKMGRDAA 414
S +L+ V L+ L + +T RK + +C V+TR ARL AAG+ +L+K+
Sbjct: 123 -SENLEDVRAILQTALGLETTD-EERKLVRRVCEAVSTRAARLCAAGLAAILQKI--REN 178
Query: 415 KDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVIEHSNDGSGIGAALLA 474
+ + K + +DG +Y+ Y + + L TL +L + ++ + DGSG GAAL+A
Sbjct: 179 RGYEHLKVTVGVDGSVYKLYPGFKERLAETLRDLAPDC---DVSFIPAEDGSGKGAALVA 235
Query: 475 A 475
A
Sbjct: 236 A 236
|
Hexokinase (EC:2.7.1.1) contains two structurally similar domains represented by this family and pfam00349. Some members of the family have two copies of each of these domains. Length = 238 |
| >gnl|CDD|201171 pfam00349, Hexokinase_1, Hexokinase | Back alignment and domain information |
|---|
Score = 175 bits (447), Expect = 2e-52
Identities = 85/204 (41%), Positives = 112/204 (54%), Gaps = 22/204 (10%)
Query: 42 KEFEEKCRTPAAKLKQVADAMTVEMHAGLASEGGS--KLKMIISYVDNLPTGDEKGTYYA 99
E + R L++V EM GL+ EGG+ + M+ ++V + PTG EKG + A
Sbjct: 7 DELLNQFRVSTETLREVVKRFISEMEKGLSKEGGNLAAVPMLPTFVRSTPTGTEKGDFLA 66
Query: 100 LDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQES 159
LDLGGTNFRVL V L G G + Q + +P LMTGT + LFD+IA L F+
Sbjct: 67 LDLGGTNFRVLLVKLTGNGKVEMTQS--KYRLPEELMTGTGEQLFDFIADCLKDFM---- 120
Query: 160 EEFKLSPGRQR-ELGFTFSFPVMQTSINTGTLV------------GRDVVEELSRAMAKQ 206
+E ++ LGFTFSFP QTSIN G L+ G DVV L A+ ++
Sbjct: 121 DEQFPLGKKEPLPLGFTFSFPCSQTSINEGILIRWTKGFKISGVEGHDVVPLLQEAIKRR 180
Query: 207 GL-DMSVSALVNDTVGTLAGGRYT 229
G+ D+ V A+VNDTVGTL YT
Sbjct: 181 GIPDIDVVAVVNDTVGTLMACAYT 204
|
Hexokinase (EC:2.7.1.1) contains two structurally similar domains represented by this family and pfam03727. Some members of the family have two copies of each of these domains. Length = 205 |
| >gnl|CDD|212657 cd00012, NBD_sugar-kinase_HSP70_actin, Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily | Back alignment and domain information |
|---|
Score = 46.4 bits (110), Expect = 7e-06
Identities = 32/154 (20%), Positives = 57/154 (37%), Gaps = 16/154 (10%)
Query: 99 ALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQE 158
+D+G T+ + L G+ ++ +E + D L + + L + + Q
Sbjct: 2 GIDIGSTSTKAGVADLDGE---ILPEEIVPTPVGRPGAVTDLDELEEALRELLKEALRQL 58
Query: 159 SEEFKLSPGRQRELGFTFSFPVMQTSINTGTLVGRDVVEELSRAMAKQGLDMSVSALVND 218
E +G T V + + ++ + + A+A + L A+VND
Sbjct: 59 KSEI-------DAVGITEPGGVPKEN---REVIILPNLLLIPLALALEDLGGVPVAVVND 108
Query: 219 TVGTLAGGRYTNKDV--VAAVILGTGS-NAAYVE 249
V K+ V V LGTG+ A VE
Sbjct: 109 AVAAALAEGLFGKEEDTVLVVDLGTGTTGIAIVE 142
|
This superfamily includes the actin family, the HSP70 family of molecular chaperones and nucleotide exchange factors, the ROK (repressor, ORF, kinase) family, the hexokinase family, the FGGY family (which includes glycerol kinase and similar carbohydrate kinases such as rhamnulokinase and xylulokinase), the exopolyphosphatase/guanosine pentaphosphate phosphohydrolase/nucleoside triphosphate diphosphohydrolase family, propionate kinase/acetate kinase family, glycerol dehydratase reactivase, 2-hydroxyglutaryl-CoA dehydratase component A, N-acetylglucosamine kinase, butyrate kinase 2, Escherichia coli YeaZ and similar glycoproteases, the cell shape-determining protein MreB, the plasmid DNA segregation factor ParM, cell cycle proteins FtsA, Pili assembly protein PilM, ethanolamine utilization protein EutJ, and similar proteins. The nucleotide-binding site residues are conserved; the nucleotide sits in a deep cleft formed between the two lobes of the nucleotide-binding domain (NBD). Substrate binding to superfamily members is associated with closure of this catalytic site cleft. The functional activities of several members of the superfamily, including hexokinases, actin, and HSP70s, are modulated by allosteric effectors, which may act on the cleft closure. Length = 185 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 484 | |||
| PLN02405 | 497 | hexokinase | 100.0 | |
| PLN02596 | 490 | hexokinase-like | 100.0 | |
| PLN02362 | 509 | hexokinase | 100.0 | |
| PLN02914 | 490 | hexokinase | 100.0 | |
| KOG1369 | 474 | consensus Hexokinase [Carbohydrate transport and m | 100.0 | |
| PTZ00107 | 464 | hexokinase; Provisional | 100.0 | |
| COG5026 | 466 | Hexokinase [Carbohydrate transport and metabolism] | 100.0 | |
| PF03727 | 243 | Hexokinase_2: Hexokinase; InterPro: IPR022673 Hexo | 100.0 | |
| PF00349 | 206 | Hexokinase_1: Hexokinase; InterPro: IPR022672 Hexo | 100.0 | |
| PRK13310 | 303 | N-acetyl-D-glucosamine kinase; Provisional | 99.94 | |
| TIGR00744 | 318 | ROK_glcA_fam ROK family protein (putative glucokin | 99.94 | |
| PRK09698 | 302 | D-allose kinase; Provisional | 99.93 | |
| PRK09557 | 301 | fructokinase; Reviewed | 99.93 | |
| COG1940 | 314 | NagC Transcriptional regulator/sugar kinase [Trans | 99.92 | |
| PRK05082 | 291 | N-acetylmannosamine kinase; Provisional | 99.92 | |
| PRK00292 | 316 | glk glucokinase; Provisional | 99.87 | |
| PRK12408 | 336 | glucokinase; Provisional | 99.87 | |
| PRK13311 | 256 | N-acetyl-D-glucosamine kinase; Provisional | 99.85 | |
| PRK14101 | 638 | bifunctional glucokinase/RpiR family transcription | 99.75 | |
| PF00480 | 179 | ROK: ROK family; InterPro: IPR000600 A family of b | 99.69 | |
| TIGR00749 | 316 | glk glucokinase, proteobacterial type. This model | 99.69 | |
| PTZ00288 | 405 | glucokinase 1; Provisional | 99.51 | |
| KOG1794 | 336 | consensus N-Acetylglucosamine kinase [Carbohydrate | 99.31 | |
| PF01869 | 271 | BcrAD_BadFG: BadF/BadG/BcrA/BcrD ATPase family; In | 99.22 | |
| TIGR02707 | 351 | butyr_kinase butyrate kinase. This model represent | 98.91 | |
| PF02685 | 316 | Glucokinase: Glucokinase; InterPro: IPR003836 Gluc | 98.82 | |
| PRK03011 | 358 | butyrate kinase; Provisional | 98.54 | |
| smart00732 | 99 | YqgFc Likely ribonuclease with RNase H fold. YqgF | 98.5 | |
| COG2971 | 301 | Predicted N-acetylglucosamine kinase [Carbohydrate | 98.49 | |
| TIGR01314 | 505 | gntK_FGGY gluconate kinase, FGGY type. Gluconate i | 97.75 | |
| COG0837 | 320 | Glk Glucokinase [Carbohydrate transport and metabo | 97.64 | |
| COG1070 | 502 | XylB Sugar (pentulose and hexulose) kinases [Carbo | 97.51 | |
| COG1069 | 544 | AraB Ribulose kinase [Energy production and conver | 97.48 | |
| TIGR01312 | 481 | XylB D-xylulose kinase. D-xylulose kinase (XylB) g | 97.34 | |
| PRK00976 | 326 | hypothetical protein; Provisional | 97.11 | |
| PRK13318 | 258 | pantothenate kinase; Reviewed | 96.88 | |
| PF00370 | 245 | FGGY_N: FGGY family of carbohydrate kinases, N-ter | 96.87 | |
| TIGR00241 | 248 | CoA_E_activ CoA-substrate-specific enzyme activase | 96.37 | |
| TIGR03286 | 404 | methan_mark_15 putative methanogenesis marker prot | 95.95 | |
| TIGR01311 | 493 | glycerol_kin glycerol kinase. This model describes | 95.67 | |
| TIGR01315 | 541 | 5C_CHO_kinase FGGY-family pentulose kinase. This m | 95.65 | |
| PTZ00186 | 657 | heat shock 70 kDa precursor protein; Provisional | 95.62 | |
| PRK00047 | 498 | glpK glycerol kinase; Provisional | 95.36 | |
| PRK10939 | 520 | autoinducer-2 (AI-2) kinase; Provisional | 95.33 | |
| PRK13317 | 277 | pantothenate kinase; Provisional | 95.23 | |
| PRK13321 | 256 | pantothenate kinase; Reviewed | 95.23 | |
| TIGR01234 | 536 | L-ribulokinase L-ribulokinase. This enzyme catalyz | 95.2 | |
| PRK13410 | 668 | molecular chaperone DnaK; Provisional | 95.18 | |
| PTZ00009 | 653 | heat shock 70 kDa protein; Provisional | 95.17 | |
| PRK15027 | 484 | xylulokinase; Provisional | 95.14 | |
| PRK10331 | 470 | L-fuculokinase; Provisional | 94.72 | |
| COG1924 | 396 | Activator of 2-hydroxyglutaryl-CoA dehydratase (HS | 94.37 | |
| PF00012 | 602 | HSP70: Hsp70 protein; InterPro: IPR013126 Heat sho | 94.28 | |
| PTZ00294 | 504 | glycerol kinase-like protein; Provisional | 94.2 | |
| TIGR02628 | 465 | fuculo_kin_coli L-fuculokinase. Members of this fa | 94.05 | |
| PRK04123 | 548 | ribulokinase; Provisional | 93.97 | |
| PLN03184 | 673 | chloroplast Hsp70; Provisional | 93.92 | |
| PLN02295 | 512 | glycerol kinase | 93.54 | |
| TIGR02350 | 595 | prok_dnaK chaperone protein DnaK. Members of this | 92.93 | |
| TIGR01991 | 599 | HscA Fe-S protein assembly chaperone HscA. The Hea | 92.26 | |
| PF02782 | 198 | FGGY_C: FGGY family of carbohydrate kinases, C-ter | 91.7 | |
| PF07318 | 343 | DUF1464: Protein of unknown function (DUF1464); In | 90.76 | |
| TIGR01175 | 348 | pilM type IV pilus assembly protein PilM. This pro | 90.43 | |
| TIGR01174 | 371 | ftsA cell division protein FtsA. This bacterial ce | 89.78 | |
| COG0443 | 579 | DnaK Molecular chaperone [Posttranslational modifi | 89.68 | |
| PLN02669 | 556 | xylulokinase | 89.58 | |
| COG0554 | 499 | GlpK Glycerol kinase [Energy production and conver | 88.0 | |
| PRK15080 | 267 | ethanolamine utilization protein EutJ; Provisional | 87.31 | |
| TIGR02627 | 454 | rhamnulo_kin rhamnulokinase. This model describes | 86.2 | |
| KOG2517 | 516 | consensus Ribulose kinase and related carbohydrate | 84.51 | |
| COG4972 | 354 | PilM Tfp pilus assembly protein, ATPase PilM [Cell | 84.32 | |
| PTZ00400 | 663 | DnaK-type molecular chaperone; Provisional | 83.9 | |
| PRK05183 | 616 | hscA chaperone protein HscA; Provisional | 83.17 |
| >PLN02405 hexokinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-127 Score=1013.45 Aligned_cols=481 Identities=78% Similarity=1.195 Sum_probs=442.3
Q ss_pred CCceeE--eeeehhhhccceeeeeEeecccccCCchhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCCCCCCc
Q 011505 1 MGRVTV--VVVCCAALAAGVAAAVVVCRRVKRGGKCGKANGIMKEFEEKCRTPAAKLKQVADAMTVEMHAGLASEGGSKL 78 (484)
Q Consensus 1 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~~s~l 78 (484)
|+|+++ +++|+++ +|++++..+++|+++..+|.++.+++++|+++|.+|.++|++|+++|..||++||+++++|++
T Consensus 1 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~f~~~~~~L~~v~~~f~~em~~GL~~~~~s~l 78 (497)
T PLN02405 1 MGKVAVGAAVVCAAA--VCAAAALVVRRRMKSSGKWARAMEILKEFEEDCATPIGKLRQVADAMTVEMHAGLASEGGSKL 78 (497)
T ss_pred CCceeeehhhhhHHH--HHHHHHHhhhcccccchhhhHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhccCCCCCc
Confidence 788555 3333333 577777888888877778889999999999999999999999999999999999998767899
Q ss_pred ceeecccccCCCCCceeeEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhc
Q 011505 79 KMIISYVDNLPTGDEKGTYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQE 158 (484)
Q Consensus 79 ~Mlpt~v~~lP~G~E~G~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~ 158 (484)
+||||||+++|+|+|+|.|||||||||||||++|+|.|++..++.+++++++||+++|.+++++||||||+||.+|++++
T Consensus 79 ~MlpSyv~~lPtG~E~G~flAlDlGGTNfRV~~V~L~g~~~~~~~~~~~~~~ip~~~~~gt~~~LFdfIA~~i~~fl~~~ 158 (497)
T PLN02405 79 KMLISYVDNLPSGDEKGLFYALDLGGTNFRVLRVLLGGKDGRVVKQEFEEVSIPPHLMTGSSDALFDFIAAALAKFVATE 158 (497)
T ss_pred ceeccccccCCCCCcceeEEEEecCCceEEEEEEEEcCCCCceeEEEEEEeecChhhccCCHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999998766666667778999999999999999999999999999988
Q ss_pred ccccccCCCCceeeeeeeeeeeeeeecCceEE------------ECccHHHHHHHHHHhcCCCceEEEEEechHHHHhcc
Q 011505 159 SEEFKLSPGRQRELGFTFSFPVMQTSINTGTL------------VGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGG 226 (484)
Q Consensus 159 ~~~~~~~~~~~~~lGftFSfPv~q~~~~~G~l------------~G~dv~~~L~~al~r~gl~v~v~alvNDtvatlla~ 226 (484)
+.+..+.+++.++|||||||||+|+++++|+| +|+||+++|++||+|+|+||+|+||+|||||||+++
T Consensus 159 ~~~~~~~~~~~l~LGfTFSFPv~Qtsi~~g~Li~WTKGF~~~~~vG~DVv~lL~~Al~r~~l~v~v~AlvNDTVGTL~a~ 238 (497)
T PLN02405 159 GEDFHLPPGRQRELGFTFSFPVKQTSISSGTLIKWTKGFSIDDAVGQDVVGELTKAMERVGLDMRVSALVNDTIGTLAGG 238 (497)
T ss_pred ccccccCcccccccceeEeeeeccCCCCceEEEEeccccccCCccCchHHHHHHHHHHHcCCCceEEEEEecCHHHHHHh
Confidence 75433334467999999999999999999999 999999999999999999999999999999999999
Q ss_pred cccCCCcEEEEEEccCcceEEEcccccccCcCCCCCCCCcEEEeCCCCCCCCCCCCCchhhhhhhccCCCCCcceeeecc
Q 011505 227 RYTNKDVVAAVILGTGSNAAYVERAQAIPKWHGVPSKSGEMVINMEWGDFRSSHLSLSEYDNALDAESLNPGEQIFEKMI 306 (484)
Q Consensus 227 ~y~~~~~~iglIlGTG~Na~yie~~~~i~k~~~~~~~~g~miIN~EwG~f~~~~lp~T~~D~~lD~~s~npg~q~fEkm~ 306 (484)
+|.+++|.||+|+|||||+||+|+.++|+||++..+..++|+||||||+|+++++|+|+||++||++|.|||+|+||||+
T Consensus 239 aY~~~~~~iG~IlGTGtNacY~E~~~~i~k~~~~~~~~~~miINtEwG~F~~~~lp~T~~D~~lD~~S~nPG~Q~fEKmi 318 (497)
T PLN02405 239 RYYNPDVVAAVILGTGTNAAYVERAQAIPKWHGLLPKSGEMVINMEWGNFRSSHLPLTEYDHALDVESLNPGEQIFEKII 318 (497)
T ss_pred hcCCCCceEEEEEeCCeeeEEEeecccCccccccCCCCCeEEEEeccccCCCCCCCCchHHHHHhhcCCCCCcchhhHHH
Confidence 99999999999999999999999999999998766677899999999999988999999999999999999999999999
Q ss_pred ccccHHHHHHHHHHHHHhccccCCCCCCCCCCCCCccChhhhhhcccCCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHH
Q 011505 307 SGMYLGEIVRRVLLRMAQEAAFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVEL 386 (484)
Q Consensus 307 SG~YLgei~R~il~~~~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~i 386 (484)
||||||||+|++|+++++++.||++..|+.|.+||+|+|++||.|+.|+++++..+.++|.+.|+++..+.+|++.+++|
T Consensus 319 SG~YLGEivRlvLl~l~~~~~lF~g~~~~~L~~~~~l~T~~ls~i~~D~s~~l~~~~~~l~~~l~~~~~~~~~~~~vr~i 398 (497)
T PLN02405 319 SGMYLGEILRRVLLKMAEEAAFFGDTVPPKLKIPFILRTPDMSAMHHDTSPDLKVVGSKLKDILEIPNTSLKMRKVVVEL 398 (497)
T ss_pred hhccHHHHHHHHHHHHHHhccccCCCCcHhhcCCCCcccHHHHHHhcCCCchHHHHHHHHHHHcCCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999988888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCcceEEEEeceeeccchhHHHHHHHHHHHHhcccCCccEEEEEcCChh
Q 011505 387 CNIVATRGARLAAAGILGVLKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVIEHSNDGS 466 (484)
Q Consensus 387 ~~~V~~RaA~l~Aa~iaaii~~~~~~~~~~~~~~~~~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~~~~~v~i~~~~Dgs 466 (484)
|++|.+|||||+|++|+||++++++........++.+||||||+|+|||.|+++++++++++++++..++|++++++|||
T Consensus 399 ~~~V~~RAArL~Aa~iaail~k~~~~~~~~~~~~~~~VavDGsvye~yp~f~~~~~~~l~ell~~~~~~~v~l~~a~DGS 478 (497)
T PLN02405 399 CNIVATRGARLSAAGIYGILKKLGRDTVKDGEKQKSVIAMDGGLFEHYTEFSKCMESTLKELLGEEVSESIEVEHSNDGS 478 (497)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCccccccCCCcceEEEEeCchhhcCcCHHHHHHHHHHHHhCcccCceEEEEEecCch
Confidence 99999999999999999999999874321112246899999999999999999999999999988777789999999999
Q ss_pred HHHHHHHHHHhcccccC
Q 011505 467 GIGAALLAASHSKYLQD 483 (484)
Q Consensus 467 ~iGAAl~Aa~~~~~~~~ 483 (484)
|+|||++||+++++.|-
T Consensus 479 GvGAAl~AA~~~~~~~~ 495 (497)
T PLN02405 479 GIGAALLAASHSLYLEV 495 (497)
T ss_pred HHHHHHHHHHHhhhhcc
Confidence 99999999999988654
|
|
| >PLN02596 hexokinase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-125 Score=996.77 Aligned_cols=473 Identities=52% Similarity=0.869 Sum_probs=434.7
Q ss_pred CCceeEeeeehhhhccceeeeeEeeccc-ccCCchhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCCCCCCcc
Q 011505 1 MGRVTVVVVCCAALAAGVAAAVVVCRRV-KRGGKCGKANGIMKEFEEKCRTPAAKLKQVADAMTVEMHAGLASEGGSKLK 79 (484)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~~s~l~ 79 (484)
|+|++++++.+.+++||+++ ++++||. +++.+|+++++++++|+++|.+|.++|++|+++|.+||++||+++.+|+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~f~~~~~~L~~i~~~f~~em~~GL~~~~~s~l~ 80 (490)
T PLN02596 2 MRKEVVVAATVATVAAVAAA-VLMGRWKRRKERQWKHTQRILRKFARECATPVSKLWEVADALVSDMTASLTAEETTTLN 80 (490)
T ss_pred CcceeeehhHHHHHHHHHHH-HHHHHHHHHhHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhccCCCCCCc
Confidence 78866623222222357777 7777776 666799999999999999999999999999999999999999886668999
Q ss_pred eeecccccCCCCCceeeEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcc
Q 011505 80 MIISYVDNLPTGDEKGTYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQES 159 (484)
Q Consensus 80 Mlpt~v~~lP~G~E~G~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~ 159 (484)
||||||+++|||+|+|.|||||||||||||++|+|.|++..+.+...++|+||++++.+++++||||||+||.+|+++++
T Consensus 81 MlpTyv~~lPtG~E~G~yLAlDlGGTNfRV~~V~L~g~~~~~~~~~~~~~~Ip~~l~~~t~~eLFd~IA~~i~~fl~~~~ 160 (490)
T PLN02596 81 MLVSYVASLPSGDEKGLYYGLNLRGSNFLLLRARLGGKNEPISDLYREEISIPSNVLNGTSQELFDYIALELAKFVAEHP 160 (490)
T ss_pred eecccCCCCCCCCcceEEEEEeeCCceEEEEEEEEcCCCCceEEEEEEEecCChHhhcCCHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999887555566666779999999999999999999999999999876
Q ss_pred cccccCCCCceeeeeeeeeeeeeeecCceEE-----------ECccHHHHHHHHHHhcCCCceEEEEEechHHHHhcccc
Q 011505 160 EEFKLSPGRQRELGFTFSFPVMQTSINTGTL-----------VGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRY 228 (484)
Q Consensus 160 ~~~~~~~~~~~~lGftFSfPv~q~~~~~G~l-----------~G~dv~~~L~~al~r~gl~v~v~alvNDtvatlla~~y 228 (484)
.+...+.++.++||||||||++|+++++|+| +|+||+++|+++++|+|+||+|+||+|||||||++++|
T Consensus 161 ~~~~~~~~~~l~lGfTFSFP~~Q~si~~G~Li~WKgF~~~~~vG~Dvv~lL~~Al~r~~l~v~v~AivNDTVgTL~a~aY 240 (490)
T PLN02596 161 GDEADTPERVKKLGFTVSYPVDQAAASSGSAIKWKSFSADDTVGKALVNDINRALEKHGLKIRVFALVDDTIGNLAGGRY 240 (490)
T ss_pred cccccCcccccccceEEeeeeeecCCCCEEEEEeccccCCCccCcHHHHHHHHHHHhcCCCceEEEEEEcCHHHHHhhhc
Confidence 5433223457999999999999999999999 89999999999999999999999999999999999999
Q ss_pred cCCCcEEEEEEccCcceEEEcccccccCcCCCCCCCCcEEEeCCCCCCCCCCCCCchhhhhhhccCCCCCcceeeecccc
Q 011505 229 TNKDVVAAVILGTGSNAAYVERAQAIPKWHGVPSKSGEMVINMEWGDFRSSHLSLSEYDNALDAESLNPGEQIFEKMISG 308 (484)
Q Consensus 229 ~~~~~~iglIlGTG~Na~yie~~~~i~k~~~~~~~~g~miIN~EwG~f~~~~lp~T~~D~~lD~~s~npg~q~fEkm~SG 308 (484)
.+++|.||+|+|||||+||+|+.++|+|+++..+..++|+||||||+|++.++|+|+||++||++|.|||+|+||||+||
T Consensus 241 ~~~~~~iG~I~GTGtNacY~E~~~~i~k~~~~~~~~~~miINtEwG~F~~~~lp~T~~D~~lD~~S~nPG~Q~fEKMiSG 320 (490)
T PLN02596 241 YNKDTVAAVTLGMGTNAAYVEPAQAIPKWQSPSPESQEIVISTEWGNFNSCHLPITEFDASLDAESSNPGSRIFEKLTSG 320 (490)
T ss_pred CCCCeEEEEEEecccceEEEEEccccccccCCCCCCCeEEEEeccccCCCCCCCCChHHHHHhccCCCCCcchHHHHHhh
Confidence 99999999999999999999999999999876667789999999999998889999999999999999999999999999
Q ss_pred ccHHHHHHHHHHHHHhccccCCCCCCCCCCCCCccChhhhhhcccCCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHH
Q 011505 309 MYLGEIVRRVLLRMAQEAAFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELCN 388 (484)
Q Consensus 309 ~YLgei~R~il~~~~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~i~~ 388 (484)
||||||+|++|+++++++.||++..|+.|.+||+|+|++||.++.|+++++..+.++|.+.|+++.++.+|++.+++||+
T Consensus 321 ~YLGElvRlvl~~l~~~~~lF~~~~~~~L~~~~~l~T~~lS~i~~d~s~~~~~~~~~l~~~l~~~~~~~~d~~~lr~i~~ 400 (490)
T PLN02596 321 MYLGEIVRRVLLKMAEETALFGDTLPPKLTTPYLLRSPDMAAMHQDTSEDHEVVNEKLKEIFGITDSTPMAREVVAEVCD 400 (490)
T ss_pred hhHHHHHHHHHHHHHHhccccCCCCcHhhcCCCccccHHHHHHhcCCCchHHHHHHHHHHhcCCCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999998889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCcceEEEEeceeeccchhHHHHHHHHHHHHhcccCCccEEEEEcCChhHH
Q 011505 389 IVATRGARLAAAGILGVLKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVIEHSNDGSGI 468 (484)
Q Consensus 389 ~V~~RaA~l~Aa~iaaii~~~~~~~~~~~~~~~~~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~~~~~v~i~~~~Dgs~i 468 (484)
+|.+|||||+|++|+||++++++. ..++++||||||+|++||.|+++|+++++++++++...+|++.+++||||+
T Consensus 401 ~V~~RAArL~Aa~iaail~k~g~~-----~~~~~~VavDGSvye~~p~f~~~l~~al~ellg~~~~~~i~~~~s~DGSG~ 475 (490)
T PLN02596 401 IVAERGARLAGAGIVGIIKKLGRI-----ENKKSVVTVEGGLYEHYRVFRNYLHSSVWEMLGSELSDNVVIEHSHGGSGA 475 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCC-----CCCceEEEEeCcceeeCcCHHHHHHHHHHHHhCcccCCcEEEEEccCchhH
Confidence 999999999999999999999862 235689999999999999999999999999999877789999999999999
Q ss_pred HHHHHHHHhcc
Q 011505 469 GAALLAASHSK 479 (484)
Q Consensus 469 GAAl~Aa~~~~ 479 (484)
|||++||+++.
T Consensus 476 GAAl~AA~~~~ 486 (490)
T PLN02596 476 GALFLAACQTG 486 (490)
T ss_pred HHHHHHHhhcc
Confidence 99999999884
|
|
| >PLN02362 hexokinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-125 Score=1001.13 Aligned_cols=480 Identities=56% Similarity=0.912 Sum_probs=438.3
Q ss_pred CCceeE--eeeehhhhccceeeeeEeecccccCCchhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCCCCCCc
Q 011505 1 MGRVTV--VVVCCAALAAGVAAAVVVCRRVKRGGKCGKANGIMKEFEEKCRTPAAKLKQVADAMTVEMHAGLASEGGSKL 78 (484)
Q Consensus 1 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~~s~l 78 (484)
|+|+.+ +++|+++ +|++++..+++|++...+|+++.+++++|+++|.+|.++|++|+++|.+||++||+++++|++
T Consensus 1 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~f~~~~~~L~~v~~~f~~em~~GL~~~~~s~l 78 (509)
T PLN02362 1 MGKVAVGLAAAAAVA--ACAVAAVMVGRRVKSRRKWRRVVGVLKELEEACETPVGRLRQVVDAMAVEMHAGLASEGGSKL 78 (509)
T ss_pred CCceeeehhhhHHHH--HHHHHHHhhhcccccchhhhHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhccCCCCCC
Confidence 788555 3333333 466777788888877778889999999999999999999999999999999999998766899
Q ss_pred ceeecccccCCCCCceeeEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhc
Q 011505 79 KMIISYVDNLPTGDEKGTYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQE 158 (484)
Q Consensus 79 ~Mlpt~v~~lP~G~E~G~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~ 158 (484)
+||||||+++|+|+|+|.|||||||||||||++|+|.|++..++.+++++++||+++|.+++++||||||+||.+|++++
T Consensus 79 ~MlPTyv~~lPtG~E~G~fLAlDlGGTNfRV~~V~L~g~~~~~~~~~~~~~~Ip~~l~~~~~~eLFd~IA~~i~~fl~~~ 158 (509)
T PLN02362 79 KMLLTFVDDLPTGSEIGTYYALDLGGTNFRVLRVQLGGQRSSILSQDVERHPIPQHLMNSTSEVLFDFIASSLKQFVEKE 158 (509)
T ss_pred ceecCccCCCCCCCcceeEEEEecCCceEEEEEEEecCCCcceeeceeEEEecChhhccCCHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999998766565555567999999999999999999999999999988
Q ss_pred ccccccCCCCceeeeeeeeeeeeeeecCceEE------------ECccHHHHHHHHHHhcCCCceEEEEEechHHHHhcc
Q 011505 159 SEEFKLSPGRQRELGFTFSFPVMQTSINTGTL------------VGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGG 226 (484)
Q Consensus 159 ~~~~~~~~~~~~~lGftFSfPv~q~~~~~G~l------------~G~dv~~~L~~al~r~gl~v~v~alvNDtvatlla~ 226 (484)
+.+.+++..+.++||||||||++|+++++|+| +|+||+++|+++|+|+++||+|+||+|||||||+++
T Consensus 159 ~~~~~~~~~~~l~LGfTFSFPv~Q~si~~g~Li~WtKGF~~~~v~G~DVv~lL~~Al~r~~l~v~v~AlvNDTVgTL~a~ 238 (509)
T PLN02362 159 ENGSEFSQVRRRELGFTFSFPVKQTSISSGILIKWTKGFAISDMVGKDVAECLQGALNRRGLDMRVAALVNDTVGTLALG 238 (509)
T ss_pred CccccccccccccceeEEeeeeccCCCCceEEEEeccccccCcccCchHHHHHHHHHHHcCCCcEEEEEEEcCHHHHHhh
Confidence 65432223457999999999999999999999 899999999999999999999999999999999999
Q ss_pred cccCCCcEEEEEEccCcceEEEcccccccCcCCCCCCCCcEEEeCCCCCCCCCCCCCchhhhhhhccCCCCCcceeeecc
Q 011505 227 RYTNKDVVAAVILGTGSNAAYVERAQAIPKWHGVPSKSGEMVINMEWGDFRSSHLSLSEYDNALDAESLNPGEQIFEKMI 306 (484)
Q Consensus 227 ~y~~~~~~iglIlGTG~Na~yie~~~~i~k~~~~~~~~g~miIN~EwG~f~~~~lp~T~~D~~lD~~s~npg~q~fEkm~ 306 (484)
+|.+++|.||+|+|||||+||+|+.++|+|+++..+..++|+||||||+|+++++|+|+||++||.+|.|||+|+||||+
T Consensus 239 aY~~~~~~iG~IlGTGtNacY~E~~~~i~k~~~~~~~~~~miINtEwG~F~~~~lp~T~~D~~lD~~S~nPG~Q~fEKmi 318 (509)
T PLN02362 239 HYHDPDTVAAVIIGTGTNACYLERTDAIIKCQGLLTTSGSMVVNMEWGNFWSSHLPRTSYDIDLDAESPNPNDQGFEKMI 318 (509)
T ss_pred hcCCCCceEEEEEECCccceEeeehhhcccccccCCCCCcEEEEeeccCCCCCCCCCchHHHHHhcCCCCcCcchHHHHH
Confidence 99999999999999999999999999999998766677899999999999988999999999999999999999999999
Q ss_pred ccccHHHHHHHHHHHHHhccccCCCCCCCCCCCCCccChhhhhhcccCCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHH
Q 011505 307 SGMYLGEIVRRVLLRMAQEAAFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVEL 386 (484)
Q Consensus 307 SG~YLgei~R~il~~~~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~i 386 (484)
||||||||+|++|+++++++.||++ .|++|.+||+|+|++||.|+.|+++++..+..+|++.|+++..+.+|++.+++|
T Consensus 319 SG~YLGEivRlvL~~l~~~~~lF~~-~~~~L~~~~~l~T~~ls~i~~d~s~~l~~~~~~l~~~~~~~~~~~~~~~~v~~i 397 (509)
T PLN02362 319 SGMYLGDIVRRVILRMSQESDIFGP-VSSRLSTPFVLRTPSVAAMHEDDSPELQEVARILKETLGISEVPLKVRKLVVKI 397 (509)
T ss_pred hhccHHHHHHHHHHHHHhccccccC-CcHhhcCCCccccHHHHHHhcCCChhHHHHHHHHHHhcCCCCCCHHHHHHHHHH
Confidence 9999999999999999999999974 788999999999999999999999999999999999999988899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCcCC----------CCCcceEEEEeceeeccchhHHHHHHHHHHHHhcccCCcc
Q 011505 387 CNIVATRGARLAAAGILGVLKKMGRDAAKD----------GDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKN 456 (484)
Q Consensus 387 ~~~V~~RaA~l~Aa~iaaii~~~~~~~~~~----------~~~~~~~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~~~~~ 456 (484)
|++|.+|||||+|++|+||++++++..... .+.++.+||||||+|+|||.|+++++++++++++++...+
T Consensus 398 ~~~V~~RaArL~Aa~iaail~k~~~~~~~~~~~~~~~~~~~~~~~~~VavDGsvye~yp~f~~~~~~~l~ell~~~~~~~ 477 (509)
T PLN02362 398 CDVVTRRAARLAAAGIVGILKKIGRDGSGGITSGRSRSDIQIMRRTVVAVEGGLYTNYTMFREYLHEALNEILGEDVAQH 477 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccccCCCceEEEEEeCchhhcCcCHHHHHHHHHHHHhCcccCce
Confidence 999999999999999999999998532100 0124589999999999999999999999999998877789
Q ss_pred EEEEEcCChhHHHHHHHHHHhcccccC
Q 011505 457 IVIEHSNDGSGIGAALLAASHSKYLQD 483 (484)
Q Consensus 457 v~i~~~~Dgs~iGAAl~Aa~~~~~~~~ 483 (484)
|+|++++||||+|||++||++++|.||
T Consensus 478 v~i~~a~DGSgvGAAl~AA~~~~~~~~ 504 (509)
T PLN02362 478 VILKATEDGSGIGSALLAASYSSYSVD 504 (509)
T ss_pred EEEEEccCchHHHHHHHHHHHHhhhhh
Confidence 999999999999999999999999776
|
|
| >PLN02914 hexokinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-121 Score=962.75 Aligned_cols=445 Identities=59% Similarity=0.967 Sum_probs=414.1
Q ss_pred hhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCCCCCCcceeecccccCCCCCceeeEEEEEeCCceEEEEEEE
Q 011505 34 CGKANGIMKEFEEKCRTPAAKLKQVADAMTVEMHAGLASEGGSKLKMIISYVDNLPTGDEKGTYYALDLGGTNFRVLRVH 113 (484)
Q Consensus 34 ~~~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~~s~l~Mlpt~v~~lP~G~E~G~~laiDlGGTnlRv~~V~ 113 (484)
..++.+++++|+++|.+|.++|++|+++|.+||++||+++++|+++||||||.++|+|+|+|.|||||||||||||++|+
T Consensus 34 ~~~~~~~~~~~~~~f~~~~~~L~~i~~~f~~em~~GL~~~~~s~l~MlpTyv~~lPtG~E~G~fLAlDlGGTNfRV~~V~ 113 (490)
T PLN02914 34 AVSVAPILTKLQKDCATPLPVLRHVADAMAADMRAGLAVDGGGDLKMILSYVDSLPSGNEKGLFYALDLGGTNFRVLRVQ 113 (490)
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhccCCCCCcceeccccCCCCCCCeeeEEEEEecCCceEEEEEEE
Confidence 34788999999999999999999999999999999999876689999999999999999999999999999999999999
Q ss_pred eCCCcceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCceeeeeeeeeeeeeeecCceEE---
Q 011505 114 LGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGFTFSFPVMQTSINTGTL--- 190 (484)
Q Consensus 114 l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~lGftFSfPv~q~~~~~G~l--- 190 (484)
|.|++..+....+++++||.+++.+++++||||||+||.+|++++..++.++.++.++||||||||++|+++++|+|
T Consensus 114 L~g~~~~~~~~~~~~~~ip~~l~~gt~~eLFdfIA~~i~~fl~~~~~~~~~~~~~~l~LGfTFSFP~~Q~si~~g~Li~W 193 (490)
T PLN02914 114 LGGKDERVIATEFEQVSIPQELMFGTSEELFDFIASGLANFVAKEGGKFHLPEGRKREIGFTFSFPVKQTSIDSGILMKW 193 (490)
T ss_pred ecCCCCceeeeeEEEecCChhhccCCHHHHHHHHHHHHHHHHHhccccccCCccccccceeeEeeeeecCCCCceEEEEe
Confidence 99876556666677899999999999999999999999999998765433333467999999999999999999999
Q ss_pred ---------ECccHHHHHHHHHHhcCCCceEEEEEechHHHHhcccccCCCcEEEEEEccCcceEEEcccccccCcCCCC
Q 011505 191 ---------VGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRYTNKDVVAAVILGTGSNAAYVERAQAIPKWHGVP 261 (484)
Q Consensus 191 ---------~G~dv~~~L~~al~r~gl~v~v~alvNDtvatlla~~y~~~~~~iglIlGTG~Na~yie~~~~i~k~~~~~ 261 (484)
+|+||+++|++||+|+++||+|+||+|||||||++++|.+++|.||+|+|||||+||+|+.++|+|+++..
T Consensus 194 TKGF~~~gv~G~DVv~lL~~Al~r~~l~v~v~AivNDTVGTL~a~aY~~~~~~iGlIlGTGtNacY~E~~~~i~k~~~~~ 273 (490)
T PLN02914 194 TKGFAVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYWDDDVMVAVILGTGTNACYVERTDAIPKLQGQK 273 (490)
T ss_pred ccccccCCccCchHHHHHHHHHHHcCCCceEEEEEEcCHHHHHhhhcCCCCceEEEEEECCeeeEEEeecccccccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999998766
Q ss_pred CCCCcEEEeCCCCCCCCCCCCCchhhhhhhccCCCCCcceeeeccccccHHHHHHHHHHHHHhccccCCCCCCCCCCCCC
Q 011505 262 SKSGEMVINMEWGDFRSSHLSLSEYDNALDAESLNPGEQIFEKMISGMYLGEIVRRVLLRMAQEAAFFGDTVPPKLEVPF 341 (484)
Q Consensus 262 ~~~g~miIN~EwG~f~~~~lp~T~~D~~lD~~s~npg~q~fEkm~SG~YLgei~R~il~~~~~~~~lF~~~~~~~l~~~~ 341 (484)
+..++|+||||||+|+ +++|+|+||+++|++|.|||+|+||||+||||||||+|++|+++++++.||++..|+.|.+||
T Consensus 274 ~~~~~miINtEwG~F~-~~lp~T~~D~~lD~~S~nPG~Q~fEKmiSG~YLGEivRlvLl~l~~~~~lF~~~~~~~L~~~~ 352 (490)
T PLN02914 274 SSSGRTIINTEWGAFS-DGLPLTEFDREMDAASINPGEQIFEKTISGMYLGEIVRRVLLKMAETSDLFGHFVPEKLSTPF 352 (490)
T ss_pred CCCceEEEeccccccC-CCCCCChHHHHHhhCCCCCCcchhhhHHhhhhHHHHHHHHHHHHHHhcccccCCCcHhhcCCC
Confidence 6778999999999996 689999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccChhhhhhcccCCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCcc
Q 011505 342 ALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELCNIVATRGARLAAAGILGVLKKMGRDAAKDGDKQK 421 (484)
Q Consensus 342 ~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~i~~~V~~RaA~l~Aa~iaaii~~~~~~~~~~~~~~~ 421 (484)
+|+|++||+|+.|+++++..+..+|++.|+++ ++.+|++.+++||++|.+|||||+|++|+||+++++.........++
T Consensus 353 ~l~T~~ls~i~~D~s~~l~~~~~~l~~~~~~~-~~~~d~~~vr~i~~~V~~RAArL~Aa~iaail~k~~~~~~~~~~~~~ 431 (490)
T PLN02914 353 ALRTPHLCAMQQDNSDDLQAVGSILYDVLGVE-ASLSARRRVVEVCDTIVKRGGRLAGAGIVGILEKMEEDSKGMIFGKR 431 (490)
T ss_pred ccccHHHHHHhcCCChhHHHHHHHHHHhcCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCce
Confidence 99999999999999999999999999999995 89999999999999999999999999999999999873211112246
Q ss_pred eEEEEeceeeccchhHHHHHHHHHHHHhcccCCccEEEEEcCChhHHHHHHHHHHhccc
Q 011505 422 TVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVIEHSNDGSGIGAALLAASHSKY 480 (484)
Q Consensus 422 ~~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~~~~~v~i~~~~Dgs~iGAAl~Aa~~~~~ 480 (484)
.+||||||||+|||.|+++++++++++++++..++|+|++++||||+|||++||++++|
T Consensus 432 ~~VavDGSv~~~~p~f~~~l~~~l~ellg~~~~~~i~i~~a~DGSGvGAAl~AA~~s~~ 490 (490)
T PLN02914 432 TVVAMDGGLYEKYPQYRRYMQDAVTELLGLELSKNIAIEHTKDGSGIGAALLAATNSKY 490 (490)
T ss_pred EEEEEeCchhhcCccHHHHHHHHHHHHhCcccCCcEEEEEccCchHHHHHHHHHHhhcC
Confidence 99999999999999999999999999998877779999999999999999999999876
|
|
| >KOG1369 consensus Hexokinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-113 Score=885.75 Aligned_cols=437 Identities=44% Similarity=0.687 Sum_probs=407.3
Q ss_pred CCchhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCCCC-CCcceeecccccCCCCCceeeEEEEEeCCceEEE
Q 011505 31 GGKCGKANGIMKEFEEKCRTPAAKLKQVADAMTVEMHAGLASEGG-SKLKMIISYVDNLPTGDEKGTYYALDLGGTNFRV 109 (484)
Q Consensus 31 ~~~~~~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~~-s~l~Mlpt~v~~lP~G~E~G~~laiDlGGTnlRv 109 (484)
..+++.+..+++++++.|.+|.++|++|+++|.+||++||++... +.++||||||.++|+|+|+|.|||||||||||||
T Consensus 21 ~~~~~~~~~~l~~~~~~f~l~~~~L~~v~~~~~~em~~gL~~~~~g~~~~mlpt~V~~lP~G~E~G~~lalDLGGTn~Rv 100 (474)
T KOG1369|consen 21 ASRLAAVSRQLEELLALFQLPDEQLREVVDAFREEMERGLAKKTHGSAVKMLPTYVPDLPDGTEKGKFLALDLGGTNFRV 100 (474)
T ss_pred hhhhhhHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhhccCCCcccccchhhcccCCCCCcCCCEEEEecCCCceEE
Confidence 357888999999999999999999999999999999999995443 4499999999999999999999999999999999
Q ss_pred EEEEeCCCcceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCceeeeeeeeeeeeeeecCceE
Q 011505 110 LRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGFTFSFPVMQTSINTGT 189 (484)
Q Consensus 110 ~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~lGftFSfPv~q~~~~~G~ 189 (484)
++|.|+|++. ...+..++|+||.++|++++++|||||++|+.+|+++++... ...+|+||||||||+|+++++|+
T Consensus 101 ~~v~L~g~~~-~~~~~~~~~~ip~~~m~gt~~~Lfd~Ia~~l~~F~~~~~~~~----~~~l~lgFTFSfP~~Q~si~~g~ 175 (474)
T KOG1369|consen 101 LLVKLGGGRT-SVRMYNKIYAIPEEIMQGTGEELFDFIARCLADFLDKMGLKG----ASKLPLGFTFSFPCRQTSIDKGT 175 (474)
T ss_pred EEEEecCCcc-cceeeeeeEecCHHHHcCchHHHHHHHHHHHHHHHHHhcccc----ccccccceEEeeeeeecccccce
Confidence 9999998765 455566789999999999999999999999999999987641 12299999999999999999999
Q ss_pred E------------ECccHHHHHHHHHHhcCCC-ceEEEEEechHHHHhcccccCCCcEEEEEEccCcceEEEcccccccC
Q 011505 190 L------------VGRDVVEELSRAMAKQGLD-MSVSALVNDTVGTLAGGRYTNKDVVAAVILGTGSNAAYVERAQAIPK 256 (484)
Q Consensus 190 l------------~G~dv~~~L~~al~r~gl~-v~v~alvNDtvatlla~~y~~~~~~iglIlGTG~Na~yie~~~~i~k 256 (484)
| +|+||+++|+++|+|++++ +.|+||+|||||||++++|.+++|.||+|+|||||+||+|+.++|++
T Consensus 176 L~~wTkGf~~~~~~g~Dvv~~L~eal~rr~~~~i~V~AlvNDTvGtl~~~~y~~~~~~igvI~GTGtNacY~e~~~~i~k 255 (474)
T KOG1369|consen 176 LIRWTKGFKATDCEGEDVVRLLREAIKRRGLFDMDVVAVVNDTVGTLMTCAYEDPNCEIGVIFGTGTNACYMEDMRNIEK 255 (474)
T ss_pred EEEecccccchhhhcchHHHHHHHHHHHcCCcceEEEEEEecCHHhHhhceecCCCcEEEEEECCCccceeeeeccchhh
Confidence 9 9999999999999999998 99999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCcEEEeCCCCCCC--CCCCCCchhhhhhhccCCCCCcceeeeccccccHHHHHHHHHHHHHhccccCCCCCC
Q 011505 257 WHGVPSKSGEMVINMEWGDFR--SSHLSLSEYDNALDAESLNPGEQIFEKMISGMYLGEIVRRVLLRMAQEAAFFGDTVP 334 (484)
Q Consensus 257 ~~~~~~~~g~miIN~EwG~f~--~~~lp~T~~D~~lD~~s~npg~q~fEkm~SG~YLgei~R~il~~~~~~~~lF~~~~~ 334 (484)
+++..... +|+||||||+|+ ..++|+|+||..+|++|.|||+|.||||+||||||||+|++|+++.+++.||++..
T Consensus 256 ~~~~~~~~-~miIN~EWG~F~~~~~~l~~T~yD~~vD~eS~npG~~~~EKmisGmYLGEivR~vLl~m~~~~~lf~~~~- 333 (474)
T KOG1369|consen 256 VEGDAGRG-PMCINTEWGAFGDNSLDLPRTEYDVVVDEESLNPGKQLFEKMISGMYLGEIVRLVLLDLLEEGLLFGGQS- 333 (474)
T ss_pred cccccCCC-ceEEEccccCCCccccccchhhHHHHHhhhcCCcchhHHHHHhccccHHHHHHHHHHHHhHhhhhhcccc-
Confidence 99876555 899999999999 45699999999999999999999999999999999999999999999999999888
Q ss_pred CCCCCCCccChhhhhhcccCCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCc
Q 011505 335 PKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELCNIVATRGARLAAAGILGVLKKMGRDAA 414 (484)
Q Consensus 335 ~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~i~~~V~~RaA~l~Aa~iaaii~~~~~~~~ 414 (484)
++| +|+.|+|+++|+|++|.++++..+.. +.+.++++..+.+|++.++++|+.|++|||||+||||+||+++++.
T Consensus 334 ~~l-~p~~~~T~~~S~i~~D~~~~l~~~~~-~~~~l~~~~~~~~~r~~V~~vc~~v~~RaA~L~aagIaail~k~~~--- 408 (474)
T KOG1369|consen 334 TKL-TPFIFETKYVSAIEEDDTGALQETEK-ILDLLGLETTTTEDRKLVREVCDVVSRRAARLAAAGIAAILNKTGE--- 408 (474)
T ss_pred ccc-CcceeccchHHhHhcCCchHHHHHHH-HHHhhCCCcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhcc---
Confidence 777 99999999999999999999999988 6666999989999999999999999999999999999999999996
Q ss_pred CCCCCcceEEEEeceeeccchhHHHHHHHHHHHHhcccCCccEEEEEcCChhHHHHHHHHHHhcccccC
Q 011505 415 KDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVIEHSNDGSGIGAALLAASHSKYLQD 483 (484)
Q Consensus 415 ~~~~~~~~~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~~~~~v~i~~~~Dgs~iGAAl~Aa~~~~~~~~ 483 (484)
...++++||+|||+|++||.|+++|++++++++| ...+|.|.+++|||++|||++||++++++|.
T Consensus 409 --~~~~~~~VgvdGsly~~yP~f~~~m~~~l~eLlg--~~~~v~i~~s~dgSg~GAAL~Aav~~~~~~~ 473 (474)
T KOG1369|consen 409 --LSRKRVTVGVDGSLYKNHPFFREYLKEALRELLG--PSIHVKLVLSEDGSGRGAALIAAVASRLKQE 473 (474)
T ss_pred --cccCceEEEeccchhHcCchHHHHHHHHHHHHhC--CCceEEEEECCCCccccHHHHHHHHhhhhcc
Confidence 2346799999999999999999999999999998 3568999999999999999999999999875
|
|
| >PTZ00107 hexokinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-108 Score=864.88 Aligned_cols=417 Identities=36% Similarity=0.555 Sum_probs=378.4
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCC---------CCCCcceeecccccCCCCCceeeEEEEEeCCceE
Q 011505 37 ANGIMKEFEEKCRTPAAKLKQVADAMTVEMHAGLASE---------GGSKLKMIISYVDNLPTGDEKGTYYALDLGGTNF 107 (484)
Q Consensus 37 ~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~---------~~s~l~Mlpt~v~~lP~G~E~G~~laiDlGGTnl 107 (484)
....+++++++|.+|.++|++|+++|.+||++||+++ ++|+++||||||+++|+|+|+|.|||||||||||
T Consensus 7 ~~~~~~~~~~~f~~~~~~L~~i~~~f~~em~~GL~~~~~~~~~~~~~~s~l~Mlps~v~~lPtG~E~G~fLAlDlGGTN~ 86 (464)
T PTZ00107 7 QRVRLASLVNQFTMSKEKLKELVDYFLYELVEGLEAHRRHRNLWIPNECSFKMLDSCVYNLPTGKEKGVYYAIDFGGTNF 86 (464)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhcccccccccCCCCCCccccccccCCCCCCCccceEEEEecCCceE
Confidence 4566888888999999999999999999999999875 3588999999999999999999999999999999
Q ss_pred EEEEEEeCCCcceeEEeeeeeeecCCCcccc---------CcchhHHHHHHHHHHHHhhcccccccCCCCceeeeeeeee
Q 011505 108 RVLRVHLGGKGVGLINQEFAEVSIPPHLMTG---------TSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGFTFSF 178 (484)
Q Consensus 108 Rv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~---------~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~lGftFSf 178 (484)
||++|+|.|++. .....+++.||++++.+ ++++||||||+||.+|++++.... ...+.++|||||||
T Consensus 87 RV~~V~L~g~~~--~~~~~~~~~ip~~~~~~~~~~~~k~~t~~~lFd~IA~~i~~fl~~~~~~~--~~~~~l~lGfTFSF 162 (464)
T PTZ00107 87 RAVRVSLRGGGK--MERTQSKFSLPKSALLGEKGLLDKKATATDLFDHIAKSIKKMMEENGDPE--DLNKPVPVGFTFSF 162 (464)
T ss_pred EEEEEEeCCCCc--eeeEEEEEeCCHHHhccccccccccCCHHHHHHHHHHHHHHHHHhccccc--cccccccceeEEee
Confidence 999999988643 22334579999998888 899999999999999999876211 12357999999999
Q ss_pred eeeeeecCceEE-----------------ECccHHHHHHHHHHhcCCCceEEEEEechHHHHhcccccC----CCcEEEE
Q 011505 179 PVMQTSINTGTL-----------------VGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRYTN----KDVVAAV 237 (484)
Q Consensus 179 Pv~q~~~~~G~l-----------------~G~dv~~~L~~al~r~gl~v~v~alvNDtvatlla~~y~~----~~~~igl 237 (484)
|++|+++++|+| +|+||+++|+++|+|+++||+|+||+|||||||++++|.+ ++|.||+
T Consensus 163 P~~Q~si~~g~Li~WtKGF~~~~~~~~~v~G~DV~~lL~~Al~r~~l~v~v~AivNDTVgTL~a~ay~~~~~~~~~~iGl 242 (464)
T PTZ00107 163 PCTQLSVNNAILIDWTKGFETGRATNDPVEGKDVGELLNDAFKRNNVPANVVAVLNDTVGTLISCAYQKPKNTPPCQVGV 242 (464)
T ss_pred eeecccCCceEEEEeccceeeccCCCCCccCchHHHHHHHHHHHcCCCceEEEEEEcCHHHHHHHHhcCcCCCCCceEEE
Confidence 999999999999 6899999999999999999999999999999999999999 9999999
Q ss_pred EEccCcceEEEcccccccCcCCCCCCCCcEEEeCCCCCCCCCCCCCchhhhhhhccCCCCCcceeeeccccccHHHHHHH
Q 011505 238 ILGTGSNAAYVERAQAIPKWHGVPSKSGEMVINMEWGDFRSSHLSLSEYDNALDAESLNPGEQIFEKMISGMYLGEIVRR 317 (484)
Q Consensus 238 IlGTG~Na~yie~~~~i~k~~~~~~~~g~miIN~EwG~f~~~~lp~T~~D~~lD~~s~npg~q~fEkm~SG~YLgei~R~ 317 (484)
|+|||||+||+|+.... ...++|+||||||+|+ +.+|+|+||+++|+.|.|||+|+||||+||||||||+|+
T Consensus 243 IlGTG~NacY~E~~~~~-------~~~~~~iINtEwG~F~-~~lp~T~~D~~lD~~S~npg~Q~fEKmiSG~YLGEi~Rl 314 (464)
T PTZ00107 243 IIGTGSNACYFEPEVSA-------YGYAGTPINMECGNFD-SKLPITPYDLEMDWYTPNRGRQQFEKMISGAYLGEISRR 314 (464)
T ss_pred EEeccccceeeehhhcc-------CCCCcEEEEeeccccC-CCCCCChHHHHHhhcCCCCCcCchhhHHhhhhHHHHHHH
Confidence 99999999999954321 1245799999999996 569999999999999999999999999999999999999
Q ss_pred HHHHHHhccccCCCCCCCCCCCCCccChhhhhhcccCCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 011505 318 VLLRMAQEAAFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELCNIVATRGARL 397 (484)
Q Consensus 318 il~~~~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~i~~~V~~RaA~l 397 (484)
+|+++++++ .|+.|.++++|+|+++|.|+.|+++++..+..+|.+.+++. ++.+|++.+++||++|.+|||+|
T Consensus 315 vl~~l~~~~------~~~~l~~~~~~~t~~ls~i~~d~s~~l~~~~~~l~~~~~~~-~~~~d~~~lr~i~~~V~~RAA~L 387 (464)
T PTZ00107 315 LIVHLLQLK------APPKMWQSGSFESEDASMILNDQSPDLQFSRQVIKEAWDVD-LTDEDLYTIRKICELVRGRAAQL 387 (464)
T ss_pred HHHHHHhcC------CchhhcCCcccccHHHHhhhcCCCchHHHHHHHHHHhcCCC-CCHHHHHHHHHHHHHHHHHHHHH
Confidence 999998754 47789999999999999999999999999999999989985 78899999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCcCCCCCcceEEEEeceeeccchhHHHHHHHHHHHHhcccCCccEEEEEcCChhHHHHHHHHHHh
Q 011505 398 AAAGILGVLKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVIEHSNDGSGIGAALLAASH 477 (484)
Q Consensus 398 ~Aa~iaaii~~~~~~~~~~~~~~~~~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~~~~~v~i~~~~Dgs~iGAAl~Aa~~ 477 (484)
+|++|+||+++++.. ..+++||||||+|++||.|+++++++++++++++ ..+|++++++||||+|||++||++
T Consensus 388 ~Aa~iaail~k~~~~------~~~~~VgvDGSv~~~~p~f~~~~~~~l~~ll~~~-~~~v~l~~a~DGSg~GAAl~AA~~ 460 (464)
T PTZ00107 388 AAAFIAAPAKKTRTV------QGKATVAIDGSVYVKNPWFRRLLQEYINSILGPD-AGNVVFYLADDGSGKGAAIIAAMV 460 (464)
T ss_pred HHHHHHHHHHHhCCC------CCceEEEEeCcceecCccHHHHHHHHHHHHhCCC-CCcEEEEEccCchHHHHHHHHHHh
Confidence 999999999999862 1459999999999999999999999999999876 568999999999999999999998
Q ss_pred cc
Q 011505 478 SK 479 (484)
Q Consensus 478 ~~ 479 (484)
++
T Consensus 461 ~~ 462 (464)
T PTZ00107 461 AN 462 (464)
T ss_pred cc
Confidence 63
|
|
| >COG5026 Hexokinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-94 Score=729.95 Aligned_cols=436 Identities=39% Similarity=0.594 Sum_probs=402.0
Q ss_pred chhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCCCCCCcceeecccccCCCCCceeeEEEEEeCCceEEEEEE
Q 011505 33 KCGKANGIMKEFEEKCRTPAAKLKQVADAMTVEMHAGLASEGGSKLKMIISYVDNLPTGDEKGTYYALDLGGTNFRVLRV 112 (484)
Q Consensus 33 ~~~~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~~s~l~Mlpt~v~~lP~G~E~G~~laiDlGGTnlRv~~V 112 (484)
-|..+++.+.++++.|.+|.|+|.+++++|.+||++||+...++.++|+|+||..+|+|+|+|.||+||+||||||+|+|
T Consensus 13 ~~~~l~~~~~~~~~~~~~p~e~l~~v~~~Fieel~kgL~~~~G~~l~MIP~~v~~~p~g~e~g~~LaiD~GGTnlRvc~V 92 (466)
T COG5026 13 VEAALEQAVEELVESFTVPTEDLREVVKAFIEELEKGLQPKSGDFLPMIPTWVAPLPTGNESGSVLAIDLGGTNLRVCLV 92 (466)
T ss_pred ccHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHhccCCCCCCccccccccccCCCCCCCCCCEEEEecCCceEEEEEE
Confidence 47789999999999999999999999999999999999943334499999999999999999999999999999999999
Q ss_pred EeCCCcceeEEeeeeeeecCCCcccc-CcchhHHHHHHHHHHHHhhcccccccCCCCceeeeeeeeeeeeeeecCceEE-
Q 011505 113 HLGGKGVGLINQEFAEVSIPPHLMTG-TSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGFTFSFPVMQTSINTGTL- 190 (484)
Q Consensus 113 ~l~g~~~~i~~~~~~~~~ip~~~~~~-~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~lGftFSfPv~q~~~~~G~l- 190 (484)
+|+|.+...+.+ + ++.+|.+.... +.+++|++||++++.|++++.++. ...++++|||||||++|+++++|+|
T Consensus 93 ~l~g~gt~~~~~-s-ks~lp~e~~~~~~~~~l~~~iadrl~~fi~~~~~~~---~~~~l~~gfTFSYP~~q~sin~g~l~ 167 (466)
T COG5026 93 VLGGDGTFDIEQ-S-KSFLPVECRDSESRDELFGFIADRLAAFIKEQHPSG---YGSKLPIGFTFSYPLNQTSINEGQLI 167 (466)
T ss_pred EeCCCCCccccc-C-cccCchhhccCCChHHHHHHHHHHHHHHHHHhCchh---ccCcceeeEEEeccccccccCceeeE
Confidence 999876654443 2 34499998765 789999999999999999987654 3568999999999999999999999
Q ss_pred -----------ECccHHHHHHHHHHhcCCCceEEEEEechHHHHhcccccCCCcEEEEEEccCcceEEEcccccccCcCC
Q 011505 191 -----------VGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRYTNKDVVAAVILGTGSNAAYVERAQAIPKWHG 259 (484)
Q Consensus 191 -----------~G~dv~~~L~~al~r~gl~v~v~alvNDtvatlla~~y~~~~~~iglIlGTG~Na~yie~~~~i~k~~~ 259 (484)
+|+||+++|+++|+++++|++|++|+|||+||++++.|.++++.||+|+|||||+||+|+...|||++.
T Consensus 168 rwTKgf~i~e~ig~dvv~~l~e~l~~r~~pi~v~aviNDttgtlla~~yt~~~~~iG~IfGTGtN~~y~e~~~~ipkl~~ 247 (466)
T COG5026 168 RWTKGFDIPEVIGTDVVRLLQEALSARNLPIRVVAVINDTTGTLLASVYTSSETIIGIIFGTGTNGCYCEPKGRIPKLPR 247 (466)
T ss_pred eecccCcchhhhhhhHHHHHHHHHHhcCCceEEEEEecccHHHHHHHhhcCCCCeEEEEEecCccceEEeecccCCcCcc
Confidence 999999999999999999999999999999999999999999999999999999999999999999984
Q ss_pred C-CCCCCcEEEeCCCCCCCCCC--CCCchhhhhhhccCCCCCcceeeeccccccHHHHHHHHHHHHHhccccCCCCCCCC
Q 011505 260 V-PSKSGEMVINMEWGDFRSSH--LSLSEYDNALDAESLNPGEQIFEKMISGMYLGEIVRRVLLRMAQEAAFFGDTVPPK 336 (484)
Q Consensus 260 ~-~~~~g~miIN~EwG~f~~~~--lp~T~~D~~lD~~s~npg~q~fEkm~SG~YLgei~R~il~~~~~~~~lF~~~~~~~ 336 (484)
. .++.+.|+||+|||.|++.+ ||+|+||..+|++|.|||.|.||||+||+||||++|++|.++..++.+|.+..|++
T Consensus 248 d~~~~~~pm~iN~EwGsfdn~~~~Lp~t~ydv~idq~s~~pg~~~~Ek~~sG~yLGellr~~L~~l~~qg~~~~~q~~~~ 327 (466)
T COG5026 248 DDLPETGPMLINCEWGSFDNELSVLPRTKYDVLIDQESPNPGHQIFEKMSSGMYLGELLRLILRNLYEQGLIFNGQDPEK 327 (466)
T ss_pred ccccccCCeEEEecccccCcceeeccccceeeeeccCCCCcchHHHhhhhcceeHHHHHHHHHHHHHHHHhhccccchhh
Confidence 3 46778899999999998655 99999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccChhhhhhcccCCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCC
Q 011505 337 LEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELCNIVATRGARLAAAGILGVLKKMGRDAAKD 416 (484)
Q Consensus 337 l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~i~~~V~~RaA~l~Aa~iaaii~~~~~~~~~~ 416 (484)
+..|+.++|+.+|.++.|+++.++++...+...|+.+ .+.++++.++.+|++|.+|||||+|++|+|++.+.+..
T Consensus 328 ~~~p~~l~t~~~s~i~~D~~~nl~~t~~~f~~~~~~~-tt~eer~lI~~l~~~i~~RAArlaa~~iaAi~~ktG~~---- 402 (466)
T COG5026 328 LTDPFALSTSVLSRIEEDPFENLRNTLTTFLNDFRAP-TTKEERKLIRRLVELIGRRAARLAAVPIAAIVIKTGAY---- 402 (466)
T ss_pred cccceeeecchhhhhccccccccchhHHHHHHHhcCC-CCHHHHHHHHHHHHHHHHhhHHHHhhhHHHhhhhcCCC----
Confidence 9999999999999999999999999999999989996 88899999999999999999999999999999999952
Q ss_pred CCCcceEEEEeceeeccchhHHHHHHHHHHHHhcccCCccEEEEEcCChhHHHHHHHHHHhccccc
Q 011505 417 GDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVIEHSNDGSGIGAALLAASHSKYLQ 482 (484)
Q Consensus 417 ~~~~~~~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~~~~~v~i~~~~Dgs~iGAAl~Aa~~~~~~~ 482 (484)
++-.|+.||++|++||.|+++++++++++++++.. ++.+++.+|||++|||++|+.+.+.+|
T Consensus 403 ---k~~~v~~dGsv~e~yp~f~~~~~~~l~~~~g~~~~-~i~i~~a~dgsglGAAl~a~~~~k~~~ 464 (466)
T COG5026 403 ---KAYHVGADGSVIERYPGFRSMLREALKALLGEEGE-KIKIKPAEDGSGLGAALCALLAQKPKA 464 (466)
T ss_pred ---ccceeeeecchhhhchhHHHHHHHHHHHhhcccCc-eeeEEecccCcchHHHHHHHHhccccc
Confidence 23569999999999999999999999999995554 899999999999999999998876544
|
|
| >PF03727 Hexokinase_2: Hexokinase; InterPro: IPR022673 Hexokinase is an important enzyme that catalyses the ATP-dependent conversion of aldo- and keto-hexose sugars to the hexose-6-phosphate (H6P) | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-63 Score=484.58 Aligned_cols=241 Identities=42% Similarity=0.721 Sum_probs=214.5
Q ss_pred CcEEEEEEccCcceEEEcccccccCcCCCCCCCCcEEEeCCCCCCCCC--CCCCchhhhhhhccCCCCCcceeeeccccc
Q 011505 232 DVVAAVILGTGSNAAYVERAQAIPKWHGVPSKSGEMVINMEWGDFRSS--HLSLSEYDNALDAESLNPGEQIFEKMISGM 309 (484)
Q Consensus 232 ~~~iglIlGTG~Na~yie~~~~i~k~~~~~~~~g~miIN~EwG~f~~~--~lp~T~~D~~lD~~s~npg~q~fEkm~SG~ 309 (484)
+|.||+|+|||+|+||+|+.++|+++++ ..++|+||||||+|++. .+|+|+||+.||+.|.|||+|+||||+||+
T Consensus 1 ~~~iGlIlGTG~Na~Y~e~~~~i~~~~~---~~~~~iINtEwg~f~~~~~~~~~t~~D~~lD~~s~~pg~q~~EKmvsG~ 77 (243)
T PF03727_consen 1 ECRIGLILGTGTNACYMEKTSNIPKLKG---KDGKMIINTEWGNFDNGLLDLPRTEYDKQLDAESPNPGFQPFEKMVSGM 77 (243)
T ss_dssp TEEEEEEESSSEEEEEEEEGGG-TTSST---SSSEEEEEE-GGGTTTTTTTTTS-HHHHHHHHTSSSTTSSTTHHHTSHH
T ss_pred CcEEEEEEeCCeeEEEeeecccCccccc---cCCeEEEEeecCCCCCCCccCCCCcccHHHhhhhhccCceEEeeEecee
Confidence 4899999999999999999999999988 67899999999999653 389999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHhccccCCCCCCCCCCCCCccChhhhhhcccCCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHHH
Q 011505 310 YLGEIVRRVLLRMAQEAAFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELCNI 389 (484)
Q Consensus 310 YLgei~R~il~~~~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~i~~~ 389 (484)
|||||+|++|+++++++.||++..|+.|.++++|+|++||.+++|+++++..++.+|...|+++ ++.+|++.+++||++
T Consensus 78 YLGEl~Rlvl~~l~~~~~lf~~~~~~~l~~~~~~~t~~~s~i~~d~~~~~~~~~~~l~~~~~~~-~t~~d~~~lr~I~~a 156 (243)
T PF03727_consen 78 YLGELVRLVLLDLIKEGLLFGGQDPEKLNTPYSFDTKFLSEIEEDPSDDLSETREILQEFFGLP-PTEEDRQILRRICEA 156 (243)
T ss_dssp HHHHHHHHHHHHHHHTTSSGGGS--TTTTSTTSS-HHHHHHHTCT-TTCHHHHHHHHHHCTTSS-S-HHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhcCCccCCcchHHhcCCCcccHHHHhhhhhhcccchHHHHHHHhhccCCC-CCHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999985 899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcCCCCCcceEEEEeceeeccchhHHHHHHHHHHHHhcccCCccEEEEEcCChhHHH
Q 011505 390 VATRGARLAAAGILGVLKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVIEHSNDGSGIG 469 (484)
Q Consensus 390 V~~RaA~l~Aa~iaaii~~~~~~~~~~~~~~~~~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~~~~~v~i~~~~Dgs~iG 469 (484)
|++|||+|+|++|+||+++++.... .+.++++|++|||+|++||.|++++++++++++++. ..+|+|++++|||++|
T Consensus 157 V~~RAA~L~Aa~iaail~~~~~~~~--~~~~~v~VavDGSv~~~~p~f~~~l~~~l~~L~~~~-~~~v~~~~~~dgsg~G 233 (243)
T PF03727_consen 157 VSTRAARLVAAAIAAILNKIRENKG--RPRREVTVAVDGSVYEKYPNFRERLQEALDELLPEE-GCKVEFVLSEDGSGVG 233 (243)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCT--CSSEEEEEEEESHHHHHSTTHHHHHHHHHHHHSTT--CEEEEEEE-SSTHHHH
T ss_pred HHHHhHHHHHHHHHHHHHhhhcccc--ccCCceEEEEeCcceeeCHHHHHHHHHHHHHhcccc-cceEEEEEecCchHHH
Confidence 9999999999999999999743211 234579999999999999999999999999999876 5679999999999999
Q ss_pred HHHHHHHhcc
Q 011505 470 AALLAASHSK 479 (484)
Q Consensus 470 AAl~Aa~~~~ 479 (484)
||++||++.|
T Consensus 234 AAi~AA~a~r 243 (243)
T PF03727_consen 234 AAIAAAVACR 243 (243)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHhcC
Confidence 9999999864
|
The enzyme can catalyse this reaction on glucose, fructose, sorbitol and glucosamine, and as such is the first step in a number of metabolic pathways []. The addition of a phosphate group to the sugar acts to trap it in a cell, since the negatively charged phosphate cannot easily traverse the plasma membrane. The enzyme is widely distributed in eukaryotes. There are three isozymes of hexokinase in yeast (PI, PII and glucokinase): isozymes PI and PII phosphorylate both aldo- and keto-sugars; glucokinase is specific for aldo-hexoses. All three isozymes contain two domains []. Structural studies of yeast hexokinase reveal a well-defined catalytic pocket that binds ATP and hexose, allowing easy transfer of the phosphate from ATP to the sugar []. Vertebrates contain four hexokinase isozymes, designated I to IV, where types I to III contain a duplication of the two-domain yeast-type hexokinases. Both the N- and C-terminal halves bind hexose and H6P, though in types I an III only the C-terminal half supports catalysis, while both halves support catalysis in type II. The N-terminal half is the regulatory region. Type IV hexokinase is similar to the yeast enzyme in containing only the two domains, and is sometimes incorrectly referred to as glucokinase. The different vertebrate isozymes differ in their catalysis, localisation and regulation, thereby contributing to the different patterns of glucose metabolism in different tissues []. Whereas types I to III can phosphorylate a variety of hexose sugars and are inhibited by glucose-6-phosphate (G6P), type IV is specific for glucose and shows no G6P inhibition. Type I enzyme may have a catabolic function, producing H6P for energy production in glycolysis; it is bound to the mitochondrial membrane, which enables the coordination of glycolysis with the TCA cycle. Types II and III enzyme may have anabolic functions, providing H6P for glycogen or lipid synthesis. Type IV enzyme is found in the liver and pancreatic beta-cells, where it is controlled by insulin (activation) and glucagon (inhibition). In pancreatic beta-cells, type IV enzyme acts as a glucose sensor to modify insulin secretion. Mutations in type IV hexokinase have been associated with diabetes mellitus. Hexokinase (2.7.1.1 from EC), a fructose and glucose phosphorylating enzyme, contains two structurally similar domains represented by this family and PF00349 from PFAM. Some members of the family have two copies of each of these domains. This entry represents the more C-terminal domain.; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0005975 carbohydrate metabolic process; PDB: 4DHY_A 3ID8_A 4DCH_A 3FGU_A 3QIC_A 3A0I_X 3VEY_A 3IDH_A 3VEV_A 3VF6_A .... |
| >PF00349 Hexokinase_1: Hexokinase; InterPro: IPR022672 Hexokinase is an important enzyme that catalyses the ATP-dependent conversion of aldo- and keto-hexose sugars to the hexose-6-phosphate (H6P) | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-51 Score=387.58 Aligned_cols=190 Identities=47% Similarity=0.742 Sum_probs=165.8
Q ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCCCCC--CcceeecccccCCCCCceeeEEEEEeCCceEEEEEEE
Q 011505 36 KANGIMKEFEEKCRTPAAKLKQVADAMTVEMHAGLASEGGS--KLKMIISYVDNLPTGDEKGTYYALDLGGTNFRVLRVH 113 (484)
Q Consensus 36 ~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~~s--~l~Mlpt~v~~lP~G~E~G~~laiDlGGTnlRv~~V~ 113 (484)
...+.++++.+.|.+|.++|++|+++|++||+.||++++.+ +++||||||+++|+|+|+|.|||||||||||||++|+
T Consensus 2 ~~~~~v~~~~~~f~~s~~~L~~i~~~f~~em~~gL~~~~~~~~~l~MlPs~v~~~P~G~E~G~~LalDlGGTnlRv~~V~ 81 (206)
T PF00349_consen 2 DLQQAVQKLLQQFTLSDEQLQEISDRFLEEMEKGLAKSSSSMSSLKMLPSYVTSLPTGNEKGDFLALDLGGTNLRVALVE 81 (206)
T ss_dssp HHHHHHHHHHGGGS--HHHHHHHHHHHHHHHHHHHSTTTGCG-SS-EEEESEESSTTSTTEEEEEEEEESSSSEEEEEEE
T ss_pred hHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHccCCCCceeeeccccccccCCCCCCCceEEEEeecCcEEEEEEEE
Confidence 45688899999999999999999999999999999976532 4999999999999999999999999999999999999
Q ss_pred eCCCcceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCceeeeeeeeeeeeeeecCceEE---
Q 011505 114 LGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGFTFSFPVMQTSINTGTL--- 190 (484)
Q Consensus 114 l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~lGftFSfPv~q~~~~~G~l--- 190 (484)
|.|++...+ ..++++||.+++.+++++||||||+||.+|+++++.. +.++.++||||||||++|+++++|+|
T Consensus 82 L~g~~~~~~--~~~~~~ip~~~~~~~~~~lFd~ia~~i~~f~~~~~~~---~~~~~l~lGfTFSFP~~q~~~~~g~li~w 156 (206)
T PF00349_consen 82 LSGNGKVEI--EQEKYKIPEELMNGSGEELFDFIADCIAEFLKEHNLE---SRDEKLPLGFTFSFPVEQTSLNSGTLIRW 156 (206)
T ss_dssp EESSSEEEE--EEEEEE--HHHHTSBHHHHHHHHHHHHHHHHHHTTTT---STTSEEEEEEEEESSEEESSTTEEEE---
T ss_pred EcCCCCcee--eeccccCChHHhcCCcccHHHHHHHHHHHHHHHhccc---ccccccceEEEEEEEEEeccCCCeEEEEe
Confidence 988753223 3467999999999999999999999999999988652 13568999999999999999999999
Q ss_pred ---------ECccHHHHHHHHHHhcCCC-ceEEEEEechHHHHhcccccC
Q 011505 191 ---------VGRDVVEELSRAMAKQGLD-MSVSALVNDTVGTLAGGRYTN 230 (484)
Q Consensus 191 ---------~G~dv~~~L~~al~r~gl~-v~v~alvNDtvatlla~~y~~ 230 (484)
+|+|++++|+++|+|++++ |+|+||+|||||||++++|.+
T Consensus 157 tKgf~~~~~~G~dv~~lL~~al~r~~~~~v~v~aivNDTVgTLla~~Y~~ 206 (206)
T PF00349_consen 157 TKGFDISGVVGKDVVELLQDALKRRGLPNVKVVAIVNDTVGTLLAGAYQD 206 (206)
T ss_dssp -TT---BTGTTSBHHHHHHHHHHHHTSSEEEEEEEE-HHHHHHHHHHTT-
T ss_pred eccccccCCCCCccchhHHHHHHHhcccCcceEEEEECCHHHhhhhhcCC
Confidence 8999999999999999998 999999999999999999974
|
The enzyme can catalyse this reaction on glucose, fructose, sorbitol and glucosamine, and as such is the first step in a number of metabolic pathways []. The addition of a phosphate group to the sugar acts to trap it in a cell, since the negatively charged phosphate cannot easily traverse the plasma membrane. The enzyme is widely distributed in eukaryotes. There are three isozymes of hexokinase in yeast (PI, PII and glucokinase): isozymes PI and PII phosphorylate both aldo- and keto-sugars; glucokinase is specific for aldo-hexoses. All three isozymes contain two domains []. Structural studies of yeast hexokinase reveal a well-defined catalytic pocket that binds ATP and hexose, allowing easy transfer of the phosphate from ATP to the sugar []. Vertebrates contain four hexokinase isozymes, designated I to IV, where types I to III contain a duplication of the two-domain yeast-type hexokinases. Both the N- and C-terminal halves bind hexose and H6P, though in types I an III only the C-terminal half supports catalysis, while both halves support catalysis in type II. The N-terminal half is the regulatory region. Type IV hexokinase is similar to the yeast enzyme in containing only the two domains, and is sometimes incorrectly referred to as glucokinase. The different vertebrate isozymes differ in their catalysis, localisation and regulation, thereby contributing to the different patterns of glucose metabolism in different tissues []. Whereas types I to III can phosphorylate a variety of hexose sugars and are inhibited by glucose-6-phosphate (G6P), type IV is specific for glucose and shows no G6P inhibition. Type I enzyme may have a catabolic function, producing H6P for energy production in glycolysis; it is bound to the mitochondrial membrane, which enables the coordination of glycolysis with the TCA cycle. Types II and III enzyme may have anabolic functions, providing H6P for glycogen or lipid synthesis. Type IV enzyme is found in the liver and pancreatic beta-cells, where it is controlled by insulin (activation) and glucagon (inhibition). In pancreatic beta-cells, type IV enzyme acts as a glucose sensor to modify insulin secretion. Mutations in type IV hexokinase have been associated with diabetes mellitus. Hexokinase (2.7.1.1 from EC), a fructose and glucose phosphorylating enzyme, contains two structurally similar domains represented by this family and PF03727 from PFAM. Some hexokinases have two copies of each of these domains. This entry represents the N-terminal domain.; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0005975 carbohydrate metabolic process; PDB: 3O1W_A 3O6W_A 3O4W_B 3O08_B 3O80_A 3O5B_A 3O8M_A 3O1B_A 1BG3_A 4DHY_A .... |
| >PRK13310 N-acetyl-D-glucosamine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=9e-25 Score=220.83 Aligned_cols=284 Identities=21% Similarity=0.223 Sum_probs=209.2
Q ss_pred eEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCceeeeee
Q 011505 96 TYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGFT 175 (484)
Q Consensus 96 ~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~lGft 175 (484)
.+++||+|||++|++++++.|+ ++... +++.|. .+.+++.+.|++.+.++....+ ....+|++
T Consensus 1 ~~lgidig~t~i~~~l~d~~g~---i~~~~--~~~~~~----~~~~~~~~~i~~~i~~~~~~~~--------~~~~igia 63 (303)
T PRK13310 1 MYYGFDIGGTKIELGVFNEKLE---LQWEE--RVPTPR----DSYDAFLDAVCELVAEADQRFG--------CKGSVGIG 63 (303)
T ss_pred CeEEEEeCCCcEEEEEECCCCc---EEEEE--EecCCC----cCHHHHHHHHHHHHHHHHhhcC--------CcceEEEe
Confidence 3799999999999999999875 55332 244332 2467888888888888765432 12469999
Q ss_pred eeeeeeeeecCceEE--------ECccHHHHHHHHHHhcCCCceEEEEEechHHHHhccccc----CCCcEEEEEEccCc
Q 011505 176 FSFPVMQTSINTGTL--------VGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRYT----NKDVVAAVILGTGS 243 (484)
Q Consensus 176 FSfPv~q~~~~~G~l--------~G~dv~~~L~~al~r~gl~v~v~alvNDtvatlla~~y~----~~~~~iglIlGTG~ 243 (484)
++.|++ .++|++ .+.|+.+.|++.+ ++|| .+.||+++.++++.|. +.++.+++.+|||+
T Consensus 64 ~pG~vd---~~~g~~~~~~~~~w~~~~l~~~l~~~~---~~pV---~ieNDa~aaalaE~~~g~~~~~~~~~~l~~gtGi 134 (303)
T PRK13310 64 IPGMPE---TEDGTLYAANVPAASGKPLRADLSARL---GRDV---RLDNDANCFALSEAWDDEFTQYPLVMGLILGTGV 134 (303)
T ss_pred CCCccc---CCCCEEeccCcccccCCcHHHHHHHHH---CCCe---EEeccHhHHHHHHhhhccccCCCcEEEEEecCce
Confidence 999998 334443 7779999999988 8884 6999999999999875 46899999999999
Q ss_pred ceEEEcccccccCcCCCCCCCCcEEEeCCCC-CCCCCCCCCchhhhhhhccCCCCCcceeeeccccccHHHHHHHHHHHH
Q 011505 244 NAAYVERAQAIPKWHGVPSKSGEMVINMEWG-DFRSSHLSLSEYDNALDAESLNPGEQIFEKMISGMYLGEIVRRVLLRM 322 (484)
Q Consensus 244 Na~yie~~~~i~k~~~~~~~~g~miIN~EwG-~f~~~~lp~T~~D~~lD~~s~npg~q~fEkm~SG~YLgei~R~il~~~ 322 (484)
+++++.+++.+.+.++.++|.|||.|+.... .++... | ...-.|++. +|+|.++|+..|.+..+..
T Consensus 135 G~giv~~G~l~~G~~g~aGEiGH~~v~~~~~~~~g~~~-~------~~~C~CG~~--gclE~~~S~~al~~~~~~~---- 201 (303)
T PRK13310 135 GGGLVFNGKPISGRSYITGEFGHMRLPVDALTLLGWDA-P------LRRCGCGQK--GCIENYLSGRGFEWLYQHY---- 201 (303)
T ss_pred EEEEEECCEEeeCCCCccccccceeecccccccccccC-C------CccCCCCCc--chHHHhhcHHHHHHHHHHh----
Confidence 9999999999999999999999999975410 000000 0 000136666 6999999999885443321
Q ss_pred HhccccCCCCCCCCCCCCCccChhhhhhcccCCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011505 323 AQEAAFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELCNIVATRGARLAAAGI 402 (484)
Q Consensus 323 ~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~i~~~V~~RaA~l~Aa~i 402 (484)
. + . .++ ..++++. ++..+..|..+++++++++|.+|
T Consensus 202 ---~---~---~-------~~~-----------------~~~l~~~-----------~~~gd~~a~~~~~~~~~~la~~l 237 (303)
T PRK13310 202 ---Y---G---E-------PLQ-----------------APEIIAL-----------YYQGDEQAVAHVERYLDLLAICL 237 (303)
T ss_pred ---c---c---C-------CCC-----------------HHHHHHH-----------HHcCCHHHHHHHHHHHHHHHHHH
Confidence 0 0 0 001 1222222 34455788999999999999999
Q ss_pred HHHHHHhCCCCcCCCCCcceEEEEeceeeccchhHHHHHHHHHHHHhcccCCccEEEE---EcCChhHHHHHHHH
Q 011505 403 LGVLKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVIE---HSNDGSGIGAALLA 474 (484)
Q Consensus 403 aaii~~~~~~~~~~~~~~~~~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~~~~~v~i~---~~~Dgs~iGAAl~A 474 (484)
+++++.++| ..|.++|++.+ .+.|.+.+++.+++...+.. ..+.|+ +.+|++.+|||.++
T Consensus 238 ~n~~~~ldP----------~~IvlgG~~~~-~~~~~~~l~~~~~~~~~~~~-~~~~i~~s~~~~~a~~~GAa~~~ 300 (303)
T PRK13310 238 GNILTIVDP----------HLVVLGGGLSN-FDAIYEQLPKRLPRHLLPVA-RVPRIEKARHGDAGGVRGAAFLH 300 (303)
T ss_pred HHHHHHcCC----------CEEEECCcccC-hHHHHHHHHHHHHHHhcccc-cCceEEEcccCchHHHHhHHHHh
Confidence 999999999 68889999987 78899999999987654322 244554 37888999999876
|
|
| >TIGR00744 ROK_glcA_fam ROK family protein (putative glucokinase) | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.3e-24 Score=220.74 Aligned_cols=293 Identities=19% Similarity=0.182 Sum_probs=218.3
Q ss_pred EEEEeCCceEEEEEEEeCCCcceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCceeeeeeee
Q 011505 98 YALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGFTFS 177 (484)
Q Consensus 98 laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~lGftFS 177 (484)
++||+|||++|++++++.|+ ++.+. +++.+ .+.+++++.|.+.|.+|+++.+.. ..+...+|++++
T Consensus 1 lgidig~t~~~~~l~d~~g~---i~~~~--~~~~~-----~~~~~~~~~l~~~i~~~~~~~~~~----~~~i~gIgva~p 66 (318)
T TIGR00744 1 IGVDIGGTTIKLGVVDEEGN---ILSKW--KVPTD-----TTPETIVDAIASAVDSFIQHIAKV----GHEIVAIGIGAP 66 (318)
T ss_pred CEEEeCCCEEEEEEECCCCC---EEEEE--EeCCC-----CCHHHHHHHHHHHHHHHHHhcCCC----ccceEEEEEecc
Confidence 58999999999999999885 55332 23332 246789999999999999876532 234678999999
Q ss_pred eeeeeeecCceEE--------ECccHHHHHHHHHHhcCCCceEEEEEechHHHHhccccc----CCCcEEEEEEccCcce
Q 011505 178 FPVMQTSINTGTL--------VGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRYT----NKDVVAAVILGTGSNA 245 (484)
Q Consensus 178 fPv~q~~~~~G~l--------~G~dv~~~L~~al~r~gl~v~v~alvNDtvatlla~~y~----~~~~~iglIlGTG~Na 245 (484)
.|++ ..+|.+ .+.|+.+.|++.+ ++| +.+.||+++..+++.|. +.++.+.+++|||+++
T Consensus 67 G~vd---~~~g~~~~~~~~~w~~~~l~~~l~~~~---~~p---v~v~NDa~~~alaE~~~g~~~~~~~~~~v~igtGiG~ 137 (318)
T TIGR00744 67 GPVN---RQRGTVYFAVNLDWKQEPLKEKVEARV---GLP---VVVENDANAAALGEYKKGAGKGARDVICITLGTGLGG 137 (318)
T ss_pred cccc---CCCCEEEecCCCCCCCCCHHHHHHHHH---CCC---EEEechHHHHHHHHHHhcccCCCCcEEEEEeCCccEE
Confidence 9998 344443 6778999999988 888 46999999999999874 5688999999999999
Q ss_pred EEEcccccccCcCCCCCCCCcEEEeCCC-CCCCCCCCCCchhhhhhhccCCCCCcceeeeccccccHHHHHHHHHHHHHh
Q 011505 246 AYVERAQAIPKWHGVPSKSGEMVINMEW-GDFRSSHLSLSEYDNALDAESLNPGEQIFEKMISGMYLGEIVRRVLLRMAQ 324 (484)
Q Consensus 246 ~yie~~~~i~k~~~~~~~~g~miIN~Ew-G~f~~~~lp~T~~D~~lD~~s~npg~q~fEkm~SG~YLgei~R~il~~~~~ 324 (484)
+++.+++.+++.++.+++.|||+++.+. ..| .|++. +|+|.++|+..|-+..+......
T Consensus 138 giv~~G~~~~G~~g~agEiGh~~v~~~g~~~C----------------~cG~~--gclE~~~s~~al~~~~~~~~~~~-- 197 (318)
T TIGR00744 138 GIIINGEIRHGHNGVGAEIGHIRMVPDGRLLC----------------NCGKQ--GCIETYASATGLVRYAKRANAKP-- 197 (318)
T ss_pred EEEECCEEeecCCCCCcccCceEeCCCCCccc----------------CCCCc--chHHHHhCHHHHHHHHHHHhccc--
Confidence 9999999999999999999999998764 244 37776 69999999999855433311100
Q ss_pred ccccCCCCCCCCCCCCCccChhhhhhcccCCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011505 325 EAAFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELCNIVATRGARLAAAGILG 404 (484)
Q Consensus 325 ~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~i~~~V~~RaA~l~Aa~iaa 404 (484)
..++.+. ....+. . .....+++. ++..+..|..+++++++++|.+|++
T Consensus 198 -------~~~~~~~-----------~~~~~~--~-~~~~~i~~~-----------~~~gD~~a~~i~~~~~~~L~~~i~~ 245 (318)
T TIGR00744 198 -------ERAEVLL-----------ALGDGD--G-ISAKHVFVA-----------ARQGDPVAVDSYREVARWAGAGLAD 245 (318)
T ss_pred -------cccchhh-----------cccccC--C-CCHHHHHHH-----------HHCCCHHHHHHHHHHHHHHHHHHHH
Confidence 0001110 000000 0 022333333 4555688999999999999999999
Q ss_pred HHHHhCCCCcCCCCCcceEEEEeceeeccchhHHHHHHHHHHHHhcccCCccEEEEE---cCChhHHHHHHHHH
Q 011505 405 VLKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVIEH---SNDGSGIGAALLAA 475 (484)
Q Consensus 405 ii~~~~~~~~~~~~~~~~~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~~~~~v~i~~---~~Dgs~iGAAl~Aa 475 (484)
+++.++| ..|.++|++.+..+.|.+.+++.+++...+.....+.|.. .++++.+|||.++.
T Consensus 246 ~~~~~dP----------~~IvlgG~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~Gaa~~~~ 309 (318)
T TIGR00744 246 LASLFNP----------SAIVLGGGLSDAGDLLLDPIRKSYKRWLFGGARQVADIIAAQLGNDAGLVGAADLAR 309 (318)
T ss_pred HHHHhCC----------CEEEECChhhhCcHHHHHHHHHHHHHHhhhcccCCcEEEEcccCCchhhHHHHHHHH
Confidence 9999998 5799999999999999999999998875443333455543 77889999998864
|
This alignment models one branch of the ROK superfamily of proteins. The three members of the seed alignment for this model all have experimental evidence for activity as glucokinase, but the set of related proteins is crowded with paralogs of different or unknown function. Proteins scoring above the trusted_cutoff will show strong similarity to at least one known glucokinase and may be designated as putative glucokinases. However, definitive identification of glucokinases should be done only with extreme caution. |
| >PRK09698 D-allose kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.4e-24 Score=214.44 Aligned_cols=275 Identities=18% Similarity=0.182 Sum_probs=206.8
Q ss_pred eeeEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCceeee
Q 011505 94 KGTYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELG 173 (484)
Q Consensus 94 ~G~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~lG 173 (484)
.+++++||+|||++|+++++++|+ ++.. ..++.|.. .+.+ .++.+++.|.+++++.+ .+...+|
T Consensus 3 ~~~~lgidig~t~i~~~l~d~~g~---i~~~--~~~~~~~~---~~~~-~~~~l~~~i~~~~~~~~-------~~i~gig 66 (302)
T PRK09698 3 KNVVLGIDMGGTHIRFCLVDAEGE---ILHC--EKKRTAEV---IAPD-LVSGLGEMIDEYLRRFN-------ARCHGIV 66 (302)
T ss_pred ccEEEEEEcCCcEEEEEEEcCCCC---EEEE--EEeCCccc---cchH-HHHHHHHHHHHHHHHcC-------CCeeEEE
Confidence 468999999999999999999885 5533 22343322 2333 49999999999998753 2367899
Q ss_pred eeeeeeeeeeecCceEE-----------ECccHHHHHHHHHHhcCCCceEEEEEechHHHHhccccc---CCCcEEEEEE
Q 011505 174 FTFSFPVMQTSINTGTL-----------VGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRYT---NKDVVAAVIL 239 (484)
Q Consensus 174 ftFSfPv~q~~~~~G~l-----------~G~dv~~~L~~al~r~gl~v~v~alvNDtvatlla~~y~---~~~~~iglIl 239 (484)
+.+++|++. ++|++ .+.|+.+.|++++ ++|| .+.||+++.++++.+. +.++.+++.+
T Consensus 67 ia~pG~vd~---~~g~i~~~~~~~~~~~~~~~l~~~l~~~~---~~pv---~v~NDa~aaa~~E~~~~~~~~~~~~~v~l 137 (302)
T PRK09698 67 MGFPALVSK---DRRTVISTPNLPLTALDLYDLADKLENTL---NCPV---FFSRDVNLQLLWDVKENNLTQQLVLGAYL 137 (302)
T ss_pred EeCCcceeC---CCCEEEecCCCCccccccCCHHHHHHHHh---CCCE---EEcchHhHHHHHHHHhcCCCCceEEEEEe
Confidence 999999983 33332 5678999999988 8884 6999999999988753 4568999999
Q ss_pred ccCcceEEEcccccccCcCCCCCCCCcEEEeCCCCCCCCCCCCCchhhhhhhccCCCCCcceeeeccccccHHHHHHHHH
Q 011505 240 GTGSNAAYVERAQAIPKWHGVPSKSGEMVINMEWGDFRSSHLSLSEYDNALDAESLNPGEQIFEKMISGMYLGEIVRRVL 319 (484)
Q Consensus 240 GTG~Na~yie~~~~i~k~~~~~~~~g~miIN~EwG~f~~~~lp~T~~D~~lD~~s~npg~q~fEkm~SG~YLgei~R~il 319 (484)
|||++++++.+++.+++.++.++|.|||.++.+...|. |+++ +|+|.++|+..|-+..+.
T Consensus 138 gtGIG~giv~~G~~~~G~~g~agEiGh~~v~~~~~~C~----------------CG~~--gclE~~~S~~al~~~~~~-- 197 (302)
T PRK09698 138 GTGMGFAVWMNGAPWTGAHGVAGELGHIPLGDMTQHCG----------------CGNP--GCLETNCSGMALRRWYEQ-- 197 (302)
T ss_pred cCceEEEEEECCEEeeCCCCCccccCceEeeCCCcccC----------------CCCc--cchHhhcCHHHHHHHHHH--
Confidence 99999999999999999999999999999987755664 8888 599999999987433221
Q ss_pred HHHHhccccCCCCCCCCCCCCCccChhhhhhcccCCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 011505 320 LRMAQEAAFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELCNIVATRGARLAA 399 (484)
Q Consensus 320 ~~~~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~i~~~V~~RaA~l~A 399 (484)
. + +. . ....+++. .+ + ..+++++++++|
T Consensus 198 --~------~----~~-------~-----------------~~~~l~~~-~~----~-----------~~~~~~~~~~la 225 (302)
T PRK09698 198 --Q------P----RD-------Y-----------------PLSDLFVH-AG----D-----------HPFIQSLLENLA 225 (302)
T ss_pred --h------c----CC-------C-----------------CHHHHHHH-cC----C-----------HHHHHHHHHHHH
Confidence 0 0 00 0 01112221 11 0 125678889999
Q ss_pred HHHHHHHHHhCCCCcCCCCCcceEEEEeceeeccchhHHHHHHHHHHHHhccc-CCccEEEEE---cCChhHHHHHHHHH
Q 011505 400 AGILGVLKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEE-LFKNIVIEH---SNDGSGIGAALLAA 475 (484)
Q Consensus 400 a~iaaii~~~~~~~~~~~~~~~~~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~-~~~~v~i~~---~~Dgs~iGAAl~Aa 475 (484)
.+|+.+++.++| ..|.++|++.+..+.|.+.+++.+++.+... ....+.|.. .+|++.+|||.++.
T Consensus 226 ~~l~~li~~ldP----------~~IvlgG~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~~~~ 295 (302)
T PRK09698 226 RAIATSINLFDP----------DAIILGGGVMDMPAFPRETLIAMIQKYLRKPLPYEVVRFIYASSSDFNGAQGAAILAH 295 (302)
T ss_pred HHHHHHHHHhCC----------CEEEEcCccccCchhHHHHHHHHHHHHccCccccCCcEEEECCcCCcccHHhHHHHHH
Confidence 999999999998 6899999999988889999999999876422 223455554 77888999998864
|
|
| >PRK09557 fructokinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.93 E-value=7e-24 Score=214.21 Aligned_cols=275 Identities=19% Similarity=0.210 Sum_probs=206.1
Q ss_pred eEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCceeeeee
Q 011505 96 TYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGFT 175 (484)
Q Consensus 96 ~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~lGft 175 (484)
.+|++|+|||++|+++++++|+ ++.+. +++.| . .+.+++.+.|++.+.++..+.+ ....+|++
T Consensus 1 ~~lgidig~t~~~~~l~d~~g~---i~~~~--~~~~~--~--~~~~~~~~~i~~~i~~~~~~~~--------~~~gIgi~ 63 (301)
T PRK09557 1 MRIGIDLGGTKIEVIALDDAGE---ELFRK--RLPTP--R--DDYQQTIEAIATLVDMAEQATG--------QRGTVGVG 63 (301)
T ss_pred CEEEEEECCCcEEEEEECCCCC---EEEEE--EecCC--C--CCHHHHHHHHHHHHHHHHhhcC--------CceEEEec
Confidence 3799999999999999999875 55332 23333 1 2456788888888888765432 24679999
Q ss_pred eeeeeeeeecCceEE--------ECccHHHHHHHHHHhcCCCceEEEEEechHHHHhccccc----CCCcEEEEEEccCc
Q 011505 176 FSFPVMQTSINTGTL--------VGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRYT----NKDVVAAVILGTGS 243 (484)
Q Consensus 176 FSfPv~q~~~~~G~l--------~G~dv~~~L~~al~r~gl~v~v~alvNDtvatlla~~y~----~~~~~iglIlGTG~ 243 (484)
++.|++ .++|++ .+.++.+.|++.+ ++|| .+.||+++.++++.+. +.++.+.+++|||+
T Consensus 64 ~pG~vd---~~~g~i~~~~~~~~~~~~l~~~l~~~~---~~pv---~~~NDa~aaA~aE~~~g~~~~~~~~~~l~igtGi 134 (301)
T PRK09557 64 IPGSIS---PYTGLVKNANSTWLNGQPLDKDLSARL---NREV---RLANDANCLAVSEAVDGAAAGKQTVFAVIIGTGC 134 (301)
T ss_pred CcccCc---CCCCeEEecCCccccCCCHHHHHHHHH---CCCE---EEccchhHHHHHHHHhcccCCCCcEEEEEEccce
Confidence 999997 344443 5678999999999 8884 6999999999999874 46789999999999
Q ss_pred ceEEEcccccccCcCCCCCCCCcEEEeC---------CCCCCCCCCCCCchhhhhhhccCCCCCcceeeeccccccHHHH
Q 011505 244 NAAYVERAQAIPKWHGVPSKSGEMVINM---------EWGDFRSSHLSLSEYDNALDAESLNPGEQIFEKMISGMYLGEI 314 (484)
Q Consensus 244 Na~yie~~~~i~k~~~~~~~~g~miIN~---------EwG~f~~~~lp~T~~D~~lD~~s~npg~q~fEkm~SG~YLgei 314 (484)
+++++.+++.+++.++.++|.|||.|+. ++..| .|++. +|+|.++|+..|-+.
T Consensus 135 G~giv~~G~l~~G~~g~aGEiGH~~v~~~~~~~~~~~~g~~c----------------~cG~~--GclE~~~S~~al~~~ 196 (301)
T PRK09557 135 GAGVAINGRVHIGGNGIAGEWGHNPLPWMDEDELRYRNEVPC----------------YCGKQ--GCIETFISGTGFATD 196 (301)
T ss_pred EEEEEECCEEEecCCCCCcccCceecccccccccccCCCCcC----------------CCCCC--CEEeEEEcHHHHHHH
Confidence 9999999999999999999999999963 11122 36776 699999999988543
Q ss_pred HHHHHHHHHhccccCCCCCCCCCCCCCccChhhhhhcccCCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHH
Q 011505 315 VRRVLLRMAQEAAFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELCNIVATRG 394 (484)
Q Consensus 315 ~R~il~~~~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~i~~~V~~Ra 394 (484)
.+.. + . . .++ ...+++. ++..+..|+.+++++
T Consensus 197 ~~~~-------~----~---~------~~~-----------------~~~l~~~-----------~~~gd~~a~~~l~~~ 228 (301)
T PRK09557 197 YRRL-------S----G---K------ALK-----------------GSEIIRL-----------VEEGDPVAELAFRRY 228 (301)
T ss_pred HHHh-------c----c---C------CCC-----------------HHHHHHH-----------HHcCCHHHHHHHHHH
Confidence 3321 0 0 0 011 1222222 344457888999999
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCCCCcceEEEEeceeeccchhHHHHHHHHHHHHhcccCCccEEEE---EcCChhHHHHH
Q 011505 395 ARLAAAGILGVLKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVIE---HSNDGSGIGAA 471 (484)
Q Consensus 395 A~l~Aa~iaaii~~~~~~~~~~~~~~~~~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~~~~~v~i~---~~~Dgs~iGAA 471 (484)
++++|.+|++++..++| ..|.++|++... +.|.+.+++.+++...+... .+.|+ +.++++.+|||
T Consensus 229 ~~~La~~l~~l~~~ldP----------~~IvlgG~~~~~-~~~~~~l~~~~~~~~~~~~~-~~~i~~s~~~~~a~~~GAa 296 (301)
T PRK09557 229 EDRLAKSLAHVINILDP----------DVIVLGGGMSNV-DRLYPTLPALLKQYVFGGEC-ETPVRKALHGDSSGVRGAA 296 (301)
T ss_pred HHHHHHHHHHHHHHhCC----------CEEEEcCcccch-HHHHHHHHHHHHHHhccccc-CCeEEEcccCCchhhhhhh
Confidence 99999999999999998 689999999874 77888999999876543222 34444 37889999999
Q ss_pred HHH
Q 011505 472 LLA 474 (484)
Q Consensus 472 l~A 474 (484)
.+.
T Consensus 297 ~~~ 299 (301)
T PRK09557 297 WLW 299 (301)
T ss_pred Hhh
Confidence 764
|
|
| >COG1940 NagC Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.6e-23 Score=211.08 Aligned_cols=285 Identities=24% Similarity=0.292 Sum_probs=217.5
Q ss_pred ceeeEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCceee
Q 011505 93 EKGTYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQREL 172 (484)
Q Consensus 93 E~G~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~l 172 (484)
+..++++||+|||+++++++++.|+ ++.. ++.+.|... ..+++.+.|.+.++++++.+. . ....+
T Consensus 4 ~~~~~lgidIggt~i~~~l~d~~g~---~l~~--~~~~~~~~~---~~~~~~~~i~~~i~~~~~~~~-~------~~~~i 68 (314)
T COG1940 4 EAMTVLGIDIGGTKIKVALVDLDGE---ILLR--ERIPTPTPD---PEEAILEAILALVAELLKQAQ-G------RVAII 68 (314)
T ss_pred cCcEEEEEEecCCEEEEEEECCCCc---EEEE--EEEecCCCC---chhHHHHHHHHHHHHHHHhcC-C------cCceE
Confidence 4568999999999999999999886 5433 224444432 225889999999999988763 1 23567
Q ss_pred eeeeeeeeeeeecCceE-E---------ECccHHHHHHHHHHhcCCCceEEEEEechHHHHhccccc----CCCcEEEEE
Q 011505 173 GFTFSFPVMQTSINTGT-L---------VGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRYT----NKDVVAAVI 238 (484)
Q Consensus 173 GftFSfPv~q~~~~~G~-l---------~G~dv~~~L~~al~r~gl~v~v~alvNDtvatlla~~y~----~~~~~iglI 238 (484)
|+.++.|.. .+++. + .+.|+.+.|++.+ ++|| .|.||+++..++++|. +.++++.++
T Consensus 69 GIgi~~pg~---~~~~~~~~~~~~~~~~~~~~l~~~L~~~~---~~Pv---~veNDan~aalaE~~~g~~~~~~~~~~i~ 139 (314)
T COG1940 69 GIGIPGPGD---VDNGTVIVPAPNLGWWNGVDLAEELEARL---GLPV---FVENDANAAALAEAWFGAGRGIDDVVYIT 139 (314)
T ss_pred EEEecccee---ccCCcEEeecCCCCccccccHHHHHHHHH---CCCE---EEecHHHHHHHHHHHhCCCCCCCCEEEEE
Confidence 777777777 44442 2 5678999999999 8995 6999999999999986 357999999
Q ss_pred EccCcceEEEcccccccCcCCCCCCCCcEEEeCCCCCCCCCCCCCchhhhhhhccCCCCCcceeeeccccccHHHHHHHH
Q 011505 239 LGTGSNAAYVERAQAIPKWHGVPSKSGEMVINMEWGDFRSSHLSLSEYDNALDAESLNPGEQIFEKMISGMYLGEIVRRV 318 (484)
Q Consensus 239 lGTG~Na~yie~~~~i~k~~~~~~~~g~miIN~EwG~f~~~~lp~T~~D~~lD~~s~npg~q~fEkm~SG~YLgei~R~i 318 (484)
+|||++++++.+++.+++.++.+++.|||+++..+. |. |+++ +|+|.++|+..|-+ +.
T Consensus 140 ~gtGIG~giv~~g~l~~G~~g~age~Gh~~v~~~g~-c~----------------cG~~--GclE~~as~~al~~---~~ 197 (314)
T COG1940 140 LGTGIGGGIIVNGKLLRGANGNAGEIGHMVVDPDGE-CG----------------CGRR--GCLETYASGRAILR---RA 197 (314)
T ss_pred EccceeEEEEECCEEeecCCCccccccceEECCCCc-cC----------------CCCC--CchHHhccHHHHHH---HH
Confidence 999999999999999999999999999999998876 53 7888 59999999999944 33
Q ss_pred HHHHHhccccCCCCCCCCCCCCCccChhhhhhcccCCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 011505 319 LLRMAQEAAFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELCNIVATRGARLA 398 (484)
Q Consensus 319 l~~~~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~i~~~V~~RaA~l~ 398 (484)
.... +..... . ..+.+++. +...+..+..+++++++++
T Consensus 198 ~~~~-----------~~~~~~---~-----------------~~~~i~~~-----------a~~gd~~a~~~~~~~~~~l 235 (314)
T COG1940 198 AEAL-----------ESEAGE---L-----------------TAKDIFEL-----------AAAGDPLAKEVIERAADYL 235 (314)
T ss_pred Hhhc-----------cccccC---c-----------------CHHHHHHH-----------HHcCCHHHHHHHHHHHHHH
Confidence 1100 100000 0 23334443 5666688999999999999
Q ss_pred HHHHHHHHHHhCCCCcCCCCCcceEEEEec-eeeccchhHHHHHHHHHHHHhcccCCccEEE---EEc-CChhHHHHHHH
Q 011505 399 AAGILGVLKKMGRDAAKDGDKQKTVIAMDG-GLYEHYAEYSKCLENTLEELLGEELFKNIVI---EHS-NDGSGIGAALL 473 (484)
Q Consensus 399 Aa~iaaii~~~~~~~~~~~~~~~~~I~vdG-sv~~~~p~f~~~l~~~l~~l~~~~~~~~v~i---~~~-~Dgs~iGAAl~ 473 (484)
|.+|++++..++| ..|.++| ++....+.+.+.+++.+....... .....+ .+. ++++.+|||++
T Consensus 236 a~~ianl~~~~~P----------~~IvigG~g~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~a~~~ga~~~ 304 (314)
T COG1940 236 ARGLANLINLLDP----------EVIVIGGGGVSALGDLLLPRLRKLLAKYLFPP-VLRPRIVEAALGGNDAGLIGAALL 304 (314)
T ss_pred HHHHHHHHHhcCC----------CeEEEECcccccchhHHHHHHHHHHHHhhcch-hcccchhhhhcccccccchhHHHH
Confidence 9999999999998 5788888 999999999999999888766541 111222 224 89999999998
Q ss_pred HHH
Q 011505 474 AAS 476 (484)
Q Consensus 474 Aa~ 476 (484)
+..
T Consensus 305 ~~~ 307 (314)
T COG1940 305 ALL 307 (314)
T ss_pred HHH
Confidence 854
|
|
| >PRK05082 N-acetylmannosamine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.3e-23 Score=206.22 Aligned_cols=272 Identities=16% Similarity=0.163 Sum_probs=202.5
Q ss_pred EEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCceeeeeee
Q 011505 97 YYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGFTF 176 (484)
Q Consensus 97 ~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~lGftF 176 (484)
++++|+|||++|++++++.|+ +... ..++.|.. .+.+++.+.|++.+.++..+ ...+|+++
T Consensus 3 ~lgvdig~~~i~~~l~dl~g~---i~~~--~~~~~~~~---~~~~~~~~~i~~~i~~~~~~-----------~~~igi~~ 63 (291)
T PRK05082 3 TLAIDIGGTKIAAALVGEDGQ---IRQR--RQIPTPAS---QTPEALRQALSALVSPLQAQ-----------ADRVAVAS 63 (291)
T ss_pred EEEEEECCCEEEEEEEcCCCc---EEEE--EEecCCCC---CCHHHHHHHHHHHHHHhhhc-----------CcEEEEeC
Confidence 799999999999999999885 5532 22444432 34667888888888877521 35699999
Q ss_pred eeeeeeeec---CceE---EECccHHHHHHHHHHhcCCCceEEEEEechHHHHhccccc---CCCcEEEEEEccCcceEE
Q 011505 177 SFPVMQTSI---NTGT---LVGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRYT---NKDVVAAVILGTGSNAAY 247 (484)
Q Consensus 177 SfPv~q~~~---~~G~---l~G~dv~~~L~~al~r~gl~v~v~alvNDtvatlla~~y~---~~~~~iglIlGTG~Na~y 247 (484)
++|++.... .... +.+.|+.+.|++.+ ++|| .+.||+++.++++.+. +.++.+.+.+|||+++++
T Consensus 64 pG~vd~~~~~~~~~~~~~~w~~~~l~~~l~~~~---~~pv---~v~NDa~a~a~aE~~~g~~~~~~~~~l~ig~GiG~gi 137 (291)
T PRK05082 64 TGIINDGILTALNPHNLGGLLHFPLVQTLEQLT---DLPT---IALNDAQAAAWAEYQALPDDIRNMVFITVSTGVGGGI 137 (291)
T ss_pred cccccCCeeEEecCCCCccccCCChHHHHHHHh---CCCE---EEECcHHHHHHHHHHhcCCCCCCEEEEEECCCcceEE
Confidence 999972211 1101 16788999999888 8884 6999999999999864 567899999999999999
Q ss_pred EcccccccCcCCCCCCCCcEEEeCCCCCCCCCCCCCchhhhhhhccCCCCCcceeeeccccccHHHHHHHHHHHHHhccc
Q 011505 248 VERAQAIPKWHGVPSKSGEMVINMEWGDFRSSHLSLSEYDNALDAESLNPGEQIFEKMISGMYLGEIVRRVLLRMAQEAA 327 (484)
Q Consensus 248 ie~~~~i~k~~~~~~~~g~miIN~EwG~f~~~~lp~T~~D~~lD~~s~npg~q~fEkm~SG~YLgei~R~il~~~~~~~~ 327 (484)
+.+++.+++.++.++|.|||.|+.+...|. |+++ +|+|.++|+..|-+..+ ..
T Consensus 138 v~~G~~~~G~~g~AGEiGh~~v~~~g~~c~----------------CG~~--GclE~~~S~~al~~~~~----~~----- 190 (291)
T PRK05082 138 VLNGKLLTGPGGLAGHIGHTLADPHGPVCG----------------CGRR--GCVEAIASGRAIAAAAQ----GW----- 190 (291)
T ss_pred EECCEEeeCCCCccccccceEecCCCCCCC----------------CCCc--CchhhhcCHHHHHHHHH----Hh-----
Confidence 999999999999999999999987644453 7887 59999999998833211 10
Q ss_pred cCCCCCCCCCCCCCccChhhhhhcccCCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011505 328 FFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELCNIVATRGARLAAAGILGVLK 407 (484)
Q Consensus 328 lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~i~~~V~~RaA~l~Aa~iaaii~ 407 (484)
+ +. .+ ...+++. ++..+..|..+++++++++|.+|++++.
T Consensus 191 -~----~~-------~~-----------------~~~i~~~-----------~~~gd~~a~~~~~~~~~~la~~l~~l~~ 230 (291)
T PRK05082 191 -L----AG-------CD-----------------AKTIFER-----------AGQGDEQAQALINRSAQAIARLIADLKA 230 (291)
T ss_pred -h----cC-------CC-----------------HHHHHHH-----------HHcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 00 00 1122222 3334467888999999999999999999
Q ss_pred HhCCCCcCCCCCcceEEEEeceeeccchhHHHHHHHHHHHHhcccCCccEEEEE---cCChhHHHHHHHH
Q 011505 408 KMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVIEH---SNDGSGIGAALLA 474 (484)
Q Consensus 408 ~~~~~~~~~~~~~~~~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~~~~~v~i~~---~~Dgs~iGAAl~A 474 (484)
.++| ..|.++|++.. .+.|.+.+++++++.... ..+.|+. .+|++.+|||.++
T Consensus 231 ~~dp----------e~IvlgG~~~~-~~~~~~~i~~~l~~~~~~---~~~~i~~s~~~~~~~~~GAa~~~ 286 (291)
T PRK05082 231 TLDC----------QCVVLGGSVGL-AEGYLELVQAYLAQEPAI---YHVPLLAAHYRHDAGLLGAALWA 286 (291)
T ss_pred HhCC----------CEEEEcCcccc-HHHHHHHHHHHHHhcccc---cCCeEEECccCCchhhhhHHHHh
Confidence 9998 67889999765 677889999999875221 1344554 6788999999876
|
|
| >PRK00292 glk glucokinase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.4e-21 Score=194.61 Aligned_cols=286 Identities=14% Similarity=0.147 Sum_probs=184.5
Q ss_pred eEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhh-cccccccCCCCceeeee
Q 011505 96 TYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQ-ESEEFKLSPGRQRELGF 174 (484)
Q Consensus 96 ~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~-~~~~~~~~~~~~~~lGf 174 (484)
++|++|+||||+|++++++.+. .+... .+++.+ + ++.+.+.+.+++++ .. .+...+|+
T Consensus 3 ~~lgiDIGgT~i~~~l~~~~~~--~~~~~--~~~~~~------~----~~~~~~~l~~~l~~~~~-------~~~~gigI 61 (316)
T PRK00292 3 PALVGDIGGTNARFALCDWANG--EIEQI--KTYATA------D----YPSLEDAIRAYLADEHG-------VQVRSACF 61 (316)
T ss_pred eEEEEEcCccceEEEEEecCCC--ceeee--EEEecC------C----CCCHHHHHHHHHHhccC-------CCCceEEE
Confidence 5899999999999999997443 23322 223322 1 12245555666654 22 13568999
Q ss_pred eeeeeeeeeecCceEE--ECccHHHHHHHHHHhcCCC-ceEEEEEechHHHHhccccc----------C----CCcEEEE
Q 011505 175 TFSFPVMQTSINTGTL--VGRDVVEELSRAMAKQGLD-MSVSALVNDTVGTLAGGRYT----------N----KDVVAAV 237 (484)
Q Consensus 175 tFSfPv~q~~~~~G~l--~G~dv~~~L~~al~r~gl~-v~v~alvNDtvatlla~~y~----------~----~~~~igl 237 (484)
.++.|++...+....+ .. + .+.|++.+ ++| | .|+||+++..+++.+. . .+..+.+
T Consensus 62 g~pG~vd~~~i~~~n~~w~~-~-~~~l~~~~---~~p~v---~l~ND~~aaalgE~~~~~~~~~~~g~~~~~~~~~~~~v 133 (316)
T PRK00292 62 AIAGPVDGDEVRMTNHHWAF-S-IAAMKQEL---GLDHL---LLINDFTAQALAIPRLGEEDLVQIGGGEPVPGAPIAVI 133 (316)
T ss_pred EEeCcccCCEEEecCCCccc-C-HHHHHHHh---CCCeE---EEEecHHHHHcccccCCHhheeEeCCCCCCCCCcEEEE
Confidence 9999997422111011 22 2 46677766 774 5 6999999999999752 1 3678999
Q ss_pred EEccCcceEEEcccccccCcCCCCCCCCcEEEeCCCCCCCCCCCCCchhhhhhhccCCCCCcceeeeccccccHHHHHHH
Q 011505 238 ILGTGSNAAYVERAQAIPKWHGVPSKSGEMVINMEWGDFRSSHLSLSEYDNALDAESLNPGEQIFEKMISGMYLGEIVRR 317 (484)
Q Consensus 238 IlGTG~Na~yie~~~~i~k~~~~~~~~g~miIN~EwG~f~~~~lp~T~~D~~lD~~s~npg~q~fEkm~SG~YLgei~R~ 317 (484)
.+|||++++++.++ +.+.++.++|.|||.++.. |.. +++.. ...|..-|..|+|.++||..|.++.+.
T Consensus 134 ~~GTGiG~giv~~g--~~g~~g~agE~GH~~~~~~-~~~--------~~~~~-~~~c~~~~~gclE~~~Sg~~L~~~~~~ 201 (316)
T PRK00292 134 GPGTGLGVAGLVPV--DGRWIVLPGEGGHVDFAPR-SEE--------EAQIL-QYLRAEFGHVSAERVLSGPGLVNLYRA 201 (316)
T ss_pred EcCCcceEEEEEec--CCceEEccCCcccccCCCC-ChH--------HHHHH-HHHHHhcCCceeEeeecHHhHHHHHHH
Confidence 99999999999887 6777777889999988643 110 00000 000222234799999999999775554
Q ss_pred HHHHHHhccccCCCCCCCCCCCCCccChhhhhhcccCCCCChHHHHHHHHHhhCCCCCCHHHHHHHH-HHHHHHHHHHHH
Q 011505 318 VLLRMAQEAAFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIV-ELCNIVATRGAR 396 (484)
Q Consensus 318 il~~~~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~-~i~~~V~~RaA~ 396 (484)
.... .+ .++. .+ ....+++. ++..+ .+|..+++++++
T Consensus 202 ~~~~---~~------~~~~-----~~-----------------~~~~i~~~-----------a~~gdd~~A~~~~~~~~~ 239 (316)
T PRK00292 202 ICKA---DG------REPE-----LL-----------------TPADITER-----------ALAGSCPLCRRTLSLFCV 239 (316)
T ss_pred HHhh---cC------CCcc-----cC-----------------CHHHHHHH-----------HHhCCChHHHHHHHHHHH
Confidence 3211 00 0000 00 12233333 55565 899999999999
Q ss_pred HHHHHHHHHHHHhCCCCcCCCCCcce-EEEEeceeec-cchhHHH-HHHHHHHHHh-cc-c-CCccEEEEEcCChhHHHH
Q 011505 397 LAAAGILGVLKKMGRDAAKDGDKQKT-VIAMDGGLYE-HYAEYSK-CLENTLEELL-GE-E-LFKNIVIEHSNDGSGIGA 470 (484)
Q Consensus 397 l~Aa~iaaii~~~~~~~~~~~~~~~~-~I~vdGsv~~-~~p~f~~-~l~~~l~~l~-~~-~-~~~~v~i~~~~Dgs~iGA 470 (484)
++|.+|++++..++| . .|.+.||+.. ..+.|.+ .+.+.+++.. .+ . ....+.+...+|++++||
T Consensus 240 ~lg~~i~~l~~~~~P----------~~~vvi~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~agl~GA 309 (316)
T PRK00292 240 ILGRVAGNLALTLGA----------RGGVYIAGGIVPRFLEFFKASGFRAAFEDKGRFSAYLADIPVYVITHPQPGLLGA 309 (316)
T ss_pred HHHHHHHHHHHHhcC----------CceEEEeCchHHhHHhhhccHHHHHHHhcCCChhhHHhcCCEEEEcCCChHHHHH
Confidence 999999999999998 4 6778888874 5566655 5566665521 11 1 123566677899999999
Q ss_pred HHHH
Q 011505 471 ALLA 474 (484)
Q Consensus 471 Al~A 474 (484)
|.++
T Consensus 310 a~~~ 313 (316)
T PRK00292 310 GAYL 313 (316)
T ss_pred HHHH
Confidence 8876
|
|
| >PRK12408 glucokinase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.2e-21 Score=199.17 Aligned_cols=292 Identities=17% Similarity=0.132 Sum_probs=185.4
Q ss_pred CCCceee-EEEEEeCCceEEEEEEEeCCCc---ceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcccccccC
Q 011505 90 TGDEKGT-YYALDLGGTNFRVLRVHLGGKG---VGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLS 165 (484)
Q Consensus 90 ~G~E~G~-~laiDlGGTnlRv~~V~l~g~~---~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~ 165 (484)
++-|++. ||++|+||||+|+++|+.++.. ..+... ...|+.. .+. +.+.+.+|+++ .
T Consensus 10 ~~~~~~~~~L~~DIGGT~i~~al~d~~g~~~~~~~~~~~----~~~~t~~----~~~----~~~~i~~~~~~-~------ 70 (336)
T PRK12408 10 VAVPRPESFVAADVGGTHVRVALVCASPDAAKPVELLDY----RTYRCAD----YPS----LAAILADFLAE-C------ 70 (336)
T ss_pred ccCcccccEEEEEcChhhhheeEEeccCCccccccccce----eEecCCC----ccC----HHHHHHHHHhc-C------
Confidence 4556663 9999999999999999876541 012211 2223221 122 33445566654 1
Q ss_pred CCCceeeeeeeeeeeeeeecCceEE--EC---ccHHHHHHHHHHhcCCCceEEEEEechHHHHhccccc-----------
Q 011505 166 PGRQRELGFTFSFPVMQTSINTGTL--VG---RDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRYT----------- 229 (484)
Q Consensus 166 ~~~~~~lGftFSfPv~q~~~~~G~l--~G---~dv~~~L~~al~r~gl~v~v~alvNDtvatlla~~y~----------- 229 (484)
.+...+|+.++.| + .++|++ .+ ..+.+.|++.+ ++| .|.|+||.++..+++.|.
T Consensus 71 -~~~~~igIg~pG~-~---~~~g~v~~~nl~w~~~~~~l~~~~---~~~--~V~l~ND~naaa~gE~~~~~~~~~~~~g~ 140 (336)
T PRK12408 71 -APVRRGVIASAGY-A---LDDGRVITANLPWTLSPEQIRAQL---GLQ--AVHLVNDFEAVAYAAPYMEGNQVLQLSGP 140 (336)
T ss_pred -CCcCEEEEEecCC-c---eECCEEEecCCCCccCHHHHHHHc---CCC--eEEEeecHHHHHcccccCCHhHeeeecCC
Confidence 1246799999998 3 223444 11 12456666655 773 146999999999999876
Q ss_pred --CC-CcEEEEEEccCcceEEEcccccccCcCCCCCCCCcEEEeCCCCCCCCCCCCCchhhhh-hhccCCCCCcceeeec
Q 011505 230 --NK-DVVAAVILGTGSNAAYVERAQAIPKWHGVPSKSGEMVINMEWGDFRSSHLSLSEYDNA-LDAESLNPGEQIFEKM 305 (484)
Q Consensus 230 --~~-~~~iglIlGTG~Na~yie~~~~i~k~~~~~~~~g~miIN~EwG~f~~~~lp~T~~D~~-lD~~s~npg~q~fEkm 305 (484)
+. ...+.+++|||.+++++.+++ .+.++.++|.|||.+...+ +.... ....|...+..|+|.+
T Consensus 141 ~~~~~~~~~~i~~GTGiGggivi~g~--~g~~~~agE~GH~~~~~~~-----------~~~~~l~~~~~~~~~~~~~E~~ 207 (336)
T PRK12408 141 AQAAAGPALVLGPGTGLGAALWIPNG--GRPVVLPTEAGQAALAAAS-----------ELEMQLLQHLLRTRTHVPIEHV 207 (336)
T ss_pred CCCCCCcEEEEECCCcceEEEEEcCC--CceeeecCccccccCCCCC-----------HHHHHHHHHHHhhCCceeHhhe
Confidence 23 578999999999999999877 6666677888888775321 00000 0111334445699999
Q ss_pred cccccHHHHHHHHHHHHHhccccCCCCCCCCCCCCCccChhhhhhcccCCCCChHHHHHHHHHhhCCCCCCHHHHHHH-H
Q 011505 306 ISGMYLGEIVRRVLLRMAQEAAFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTI-V 384 (484)
Q Consensus 306 ~SG~YLgei~R~il~~~~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~-~ 384 (484)
+||+.|.++.+..... .+ . .+..++ .+.+++. ++.. +
T Consensus 208 ~Sg~gL~~~~~~~~~~---~~--------~---~~~~~~-----------------~~~v~~~-----------a~~ggD 245 (336)
T PRK12408 208 LSGPGLLNLYRALCAL---RG--------A---TPVHAS-----------------PAAITAA-----------ALAGDD 245 (336)
T ss_pred ecHHHHHHHHHHHHhh---cC--------C---CcccCC-----------------HHHHHHH-----------HHhCCC
Confidence 9999997776654211 00 0 000011 1223322 3333 5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCcceE-EEEeceeecc-chhHHHH--HHHHHHHHhcccCCc--cEE
Q 011505 385 ELCNIVATRGARLAAAGILGVLKKMGRDAAKDGDKQKTV-IAMDGGLYEH-YAEYSKC--LENTLEELLGEELFK--NIV 458 (484)
Q Consensus 385 ~i~~~V~~RaA~l~Aa~iaaii~~~~~~~~~~~~~~~~~-I~vdGsv~~~-~p~f~~~--l~~~l~~l~~~~~~~--~v~ 458 (484)
..|..++++.++++|.+|++++..++| .. |.++||+... .+.|.+. +++.+++...+.... .|.
T Consensus 246 ~~A~~~~~~~~~~La~~i~nl~~~ldP----------e~GIvIGGGIs~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~I~ 315 (336)
T PRK12408 246 ALAHEALQVFCGFLGSVVGDMALAYGA----------RGGVYLAGGILPQIADFLARSDFVERFLNKGPMRPALEQVPVK 315 (336)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCC----------CceEEEECchhHhHHhhhcCHHHHHHHhccCchhhHhcCCCEE
Confidence 889999999999999999999999999 56 8999999876 5666664 777766543222112 344
Q ss_pred EEEcCChhHHHHHHHHH
Q 011505 459 IEHSNDGSGIGAALLAA 475 (484)
Q Consensus 459 i~~~~Dgs~iGAAl~Aa 475 (484)
+....|++.+|||.++.
T Consensus 316 ~~~~~~agl~GAa~~~~ 332 (336)
T PRK12408 316 LVEHGQLGVLGAASWYL 332 (336)
T ss_pred EEeCCChHHHHHHHHHH
Confidence 44344899999986543
|
|
| >PRK13311 N-acetyl-D-glucosamine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.7e-20 Score=181.74 Aligned_cols=224 Identities=16% Similarity=0.167 Sum_probs=167.7
Q ss_pred eEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCceeeeee
Q 011505 96 TYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGFT 175 (484)
Q Consensus 96 ~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~lGft 175 (484)
.++++|+|||++|++++++.++ ++.+ ++++.|. .+.+++++.+.+.+.++..... ....+|++
T Consensus 1 ~~lgidiggt~i~~~l~d~~g~---i~~~--~~~~~~~----~~~~~~~~~i~~~i~~~~~~~~--------~~~gIgv~ 63 (256)
T PRK13311 1 MYYGFDMGGTKIELGVFDENLQ---RIWH--KRVPTPR----EDYPQLLQILRDLTEEADTYCG--------VQGSVGIG 63 (256)
T ss_pred CEEEEEECCCcEEEEEECCCCC---EEEE--EEecCCC----cCHHHHHHHHHHHHHHHHhhcC--------CCceEEEE
Confidence 4799999999999999999885 5533 2344442 2456788888887777643221 13479999
Q ss_pred eeeeeeeeecCceEE--------ECccHHHHHHHHHHhcCCCceEEEEEechHHHHhccccc----CCCcEEEEEEccCc
Q 011505 176 FSFPVMQTSINTGTL--------VGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRYT----NKDVVAAVILGTGS 243 (484)
Q Consensus 176 FSfPv~q~~~~~G~l--------~G~dv~~~L~~al~r~gl~v~v~alvNDtvatlla~~y~----~~~~~iglIlGTG~ 243 (484)
++.|++. ++|++ .+.|+++.|++.+ ++| +.+.||+++..+++.|. +.++.+++.+|||+
T Consensus 64 ~pG~vd~---~~g~i~~~~~~~w~~~~l~~~l~~~~---~~p---V~leNDanaaAlaE~~~g~~~~~~~~v~i~lgtGi 134 (256)
T PRK13311 64 IPGLPNA---DDGTVFTANVPSAMGQPLQADLSRLI---QRE---VRIDNDANCFALSEAWDPEFRTYPTVLGLILGTGV 134 (256)
T ss_pred ecCcEEC---CCCEEEccCCCcccCCChHHHHHHHH---CCC---EEEEchhhHHHHHHHHhcCCCCCCcEEEEEECcCe
Confidence 9999973 33433 6789999999988 888 46999999999999885 46899999999999
Q ss_pred ceEEEcccccccCcCCCCCCCCcEEEe--CC-------CC-CCCCCCCCCchhhhhhhccCCCCCcceeeeccccccHHH
Q 011505 244 NAAYVERAQAIPKWHGVPSKSGEMVIN--ME-------WG-DFRSSHLSLSEYDNALDAESLNPGEQIFEKMISGMYLGE 313 (484)
Q Consensus 244 Na~yie~~~~i~k~~~~~~~~g~miIN--~E-------wG-~f~~~~lp~T~~D~~lD~~s~npg~q~fEkm~SG~YLge 313 (484)
+++++.+++.+.+.++.++|.|||.+. .+ -| .| .|++. +|+|.++|+..|.+
T Consensus 135 G~giv~~G~l~~G~~g~AGEiGh~~v~~~~~~~~~~~~~~~~c----------------~cG~~--GclE~~~S~~ai~~ 196 (256)
T PRK13311 135 GGGLIVNGSIVSGRNHITGEFGHFRLPVDALDILGADIPRVPC----------------GCGHR--GCIENYISGRGFEW 196 (256)
T ss_pred EEEEEECCEEecCCCCCCccceeEEeccCcccccccCCCCCcC----------------CCCCc--cchhheecHHHHHH
Confidence 999999999999999999999999984 21 11 22 36666 59999999998854
Q ss_pred HHHHHHHHHHhccccCCCCCCCCCCCCCccChhhhhhcccCCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHH
Q 011505 314 IVRRVLLRMAQEAAFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELCNIVATR 393 (484)
Q Consensus 314 i~R~il~~~~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~i~~~V~~R 393 (484)
..+. . . .. .. ...++++. ++..++.|+.++++
T Consensus 197 ~~~~----~------~----~~------~~-----------------~~~~l~~~-----------~~~gd~~a~~~~~~ 228 (256)
T PRK13311 197 MYSH----F------Y----QH------TL-----------------PATDIIAH-----------YAAGEPKAVAHVER 228 (256)
T ss_pred HHHH----h------c----cC------CC-----------------CHHHHHHH-----------HHcCCHHHHHHHHH
Confidence 3221 1 0 00 00 12233333 44456899999999
Q ss_pred HHHHHHHHHHHHHHHhCC
Q 011505 394 GARLAAAGILGVLKKMGR 411 (484)
Q Consensus 394 aA~l~Aa~iaaii~~~~~ 411 (484)
+++++|.+|+++++.+++
T Consensus 229 ~~~~la~~i~nl~~~~~~ 246 (256)
T PRK13311 229 FMDVLAVCLGNLLTMLGS 246 (256)
T ss_pred HHHHHHHHHHHHHHHhCC
Confidence 999999999999999987
|
|
| >PRK14101 bifunctional glucokinase/RpiR family transcriptional regulator; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.8e-17 Score=182.29 Aligned_cols=288 Identities=16% Similarity=0.162 Sum_probs=176.5
Q ss_pred eeeEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCceeee
Q 011505 94 KGTYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELG 173 (484)
Q Consensus 94 ~G~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~lG 173 (484)
-|.+|++|+||||+|+++++-+|. +... .++|+.. |+.+.+.|.+|+++.+. .....+|
T Consensus 17 ~~~~L~iDIGGT~ir~al~~~~g~---i~~~----~~~~t~~--------~~~~~~~i~~~l~~~~~------~~~~~ig 75 (638)
T PRK14101 17 DGPRLLADVGGTNARFALETGPGE---ITQI----RVYPGAD--------YPTLTDAIRKYLKDVKI------GRVNHAA 75 (638)
T ss_pred CCCEEEEEcCchhheeeeecCCCc---ccce----eEEecCC--------CCCHHHHHHHHHHhcCC------CCcceEE
Confidence 356999999999999999965553 4322 3345422 24466677777765431 1357899
Q ss_pred eeeeeeeeeeecCceEE--ECccHHHHHHHHHHhcCCCceEEEEEechHHHHhcc--------ccc----CCCcEEEEEE
Q 011505 174 FTFSFPVMQTSINTGTL--VGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGG--------RYT----NKDVVAAVIL 239 (484)
Q Consensus 174 ftFSfPv~q~~~~~G~l--~G~dv~~~L~~al~r~gl~v~v~alvNDtvatlla~--------~y~----~~~~~iglIl 239 (484)
+.+++|++.......-+ . .++ +.|++.| |+| ++.++||.++..+++ .+. +.+..+.+++
T Consensus 76 ig~pGpVd~~~~~~~nl~w~-~~~-~~l~~~~---g~~--~v~l~ND~~aaA~ge~~l~~~e~~~~G~g~~~~~~~~~~l 148 (638)
T PRK14101 76 IAIANPVDGDQVRMTNHDWS-FSI-EATRRAL---GFD--TLLVVNDFTALAMALPGLTDAQRVQVGGGTRRQNSVIGLL 148 (638)
T ss_pred EEEecCccCCeeeecCCCcE-ecH-HHHHHHc---CCC--eEEEEchHHHHHcCCccCCHHHeEEeCCCCCCCCCcEEEE
Confidence 99999998432111111 2 244 6677666 765 367999999999995 332 3456788999
Q ss_pred ccCcceE---EE-cccccccCcCCCCCCCCcEEEeCCCCCCCCCCCCCchhhhhh-hccCCCCCcceeeeccccccHHHH
Q 011505 240 GTGSNAA---YV-ERAQAIPKWHGVPSKSGEMVINMEWGDFRSSHLSLSEYDNAL-DAESLNPGEQIFEKMISGMYLGEI 314 (484)
Q Consensus 240 GTG~Na~---yi-e~~~~i~k~~~~~~~~g~miIN~EwG~f~~~~lp~T~~D~~l-D~~s~npg~q~fEkm~SG~YLgei 314 (484)
||||+.+ .+ .+++.+. .++|.|||.++. .++-...+ ...+.+.|..|+|.++||+.|.++
T Consensus 149 GtGTGlG~a~lv~~~g~~~~----~g~E~GH~~~~~-----------~~~~e~~~~~~~~~~~g~~~~E~~~Sg~gL~~~ 213 (638)
T PRK14101 149 GPGTGLGVSGLIPADDRWIA----LGSEGGHASFAP-----------QDEREDLVLQYARKKYPHVSFERVCAGPGMEII 213 (638)
T ss_pred ECCccceeeEEEecCCeeEE----CCCCccccCCCC-----------CCHHHHHHHHHHHHhcCcceeeeecchhhHHHH
Confidence 7766544 43 4433221 123445544421 12111111 112344456799999999999888
Q ss_pred HHHHHHHHHhccccCCCCCCCCCCCCCccChhhhhhcccCCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHH
Q 011505 315 VRRVLLRMAQEAAFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELCNIVATRG 394 (484)
Q Consensus 315 ~R~il~~~~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~i~~~V~~Ra 394 (484)
.|...... + .+ .+..++ ..++++. ++..+.+|..++++.
T Consensus 214 ~~~~~~~~---~------~~----~~~~~~-----------------~~~i~~~-----------a~~gd~~A~~~~~~~ 252 (638)
T PRK14101 214 YRALAARD---K------KR----VAANVD-----------------TAEIVER-----------AHAGDALALEAVECF 252 (638)
T ss_pred HHHHHhhc---C------CC----CcCcCC-----------------HHHHHHH-----------HHCCCHHHHHHHHHH
Confidence 77643210 0 00 000011 2233333 445568999999999
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCCCCcceEEEEeceeeccc-hhHHH-HHHHHHHHHhcc---c-CCccEEEEEcCChhHH
Q 011505 395 ARLAAAGILGVLKKMGRDAAKDGDKQKTVIAMDGGLYEHY-AEYSK-CLENTLEELLGE---E-LFKNIVIEHSNDGSGI 468 (484)
Q Consensus 395 A~l~Aa~iaaii~~~~~~~~~~~~~~~~~I~vdGsv~~~~-p~f~~-~l~~~l~~l~~~---~-~~~~v~i~~~~Dgs~i 468 (484)
++++|.++..++..+++. ..|.++||+..+. +.|.+ .+.+.++.. ++ - ..-.|.++..++.+++
T Consensus 253 ~~~lg~~~~nl~~~~~~p---------~~vvigGGIs~~~~~~l~~~~f~~~f~~k-g~~~~~~~~ipv~~i~~~~~~l~ 322 (638)
T PRK14101 253 CAILGTFAGNLALTLGAL---------GGIYIGGGVVPKLGELFTRSSFRARFEAK-GRFEAYLANIPTYLITAEYPAFL 322 (638)
T ss_pred HHHHHHHHHHHHHHhCCC---------CcEEEeCcHHHHHHHHcChHHHHHHHHhC-CChHHHHhcCCEEEEeCCChhHH
Confidence 999999999999999831 5788999998553 44432 455554432 11 0 1236888889999999
Q ss_pred HHHHHHH
Q 011505 469 GAALLAA 475 (484)
Q Consensus 469 GAAl~Aa 475 (484)
|||..+.
T Consensus 323 Gaa~~~~ 329 (638)
T PRK14101 323 GVSAILA 329 (638)
T ss_pred HHHHHHH
Confidence 9976553
|
|
| >PF00480 ROK: ROK family; InterPro: IPR000600 A family of bacterial proteins has been described which groups transcriptional repressors, sugar kinases and yet uncharacterised open reading frames [] | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.3e-16 Score=148.61 Aligned_cols=167 Identities=22% Similarity=0.332 Sum_probs=137.5
Q ss_pred EEEeCCceEEEEEEEeCCCcceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCceeeeeeeee
Q 011505 99 ALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGFTFSF 178 (484)
Q Consensus 99 aiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~lGftFSf 178 (484)
+||+|+|+++++++++.|+ ++.+. ++++| .+.+++++.+.+.+.+++.+... . .+|+++|.
T Consensus 1 gidig~~~i~~~l~d~~g~---ii~~~--~~~~~-----~~~~~~~~~l~~~i~~~~~~~~~--------~-gIgi~~pG 61 (179)
T PF00480_consen 1 GIDIGGTSIRIALVDLDGE---IIYSE--SIPTP-----TSPEELLDALAELIERLLADYGR--------S-GIGISVPG 61 (179)
T ss_dssp EEEEESSEEEEEEEETTSC---EEEEE--EEEHH-----SSHHHHHHHHHHHHHHHHHHHTC--------E-EEEEEESS
T ss_pred CEEECCCEEEEEEECCCCC---EEEEE--EEECC-----CCHHHHHHHHHHHHHHHHhhccc--------c-cEEEeccc
Confidence 6999999999999999886 66442 35555 35788999999999999887641 2 89999999
Q ss_pred eeeeeecCceEE--------ECccHHHHHHHHHHhcCCCceEEEEEechHHHHhccccc----CCCcEEEEEEccCcceE
Q 011505 179 PVMQTSINTGTL--------VGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRYT----NKDVVAAVILGTGSNAA 246 (484)
Q Consensus 179 Pv~q~~~~~G~l--------~G~dv~~~L~~al~r~gl~v~v~alvNDtvatlla~~y~----~~~~~iglIlGTG~Na~ 246 (484)
|++ .++|.+ .+.++.+.|++.+ ++|| .+.||+++.++++.+. +.+..+.+.+|||++++
T Consensus 62 ~v~---~~~g~i~~~~~~~~~~~~l~~~l~~~~---~~pv---~i~Nd~~~~a~ae~~~~~~~~~~~~~~l~ig~GiG~~ 132 (179)
T PF00480_consen 62 IVD---SEKGRIISSPNPGWENIPLKEELEERF---GVPV---IIENDANAAALAEYWFGAAKDCDNFLYLYIGTGIGAG 132 (179)
T ss_dssp EEE---TTTTEEEECSSGTGTTCEHHHHHHHHH---TSEE---EEEEHHHHHHHHHHHHSTTTTTSSEEEEEESSSEEEE
T ss_pred cCc---CCCCeEEecCCCCcccCCHHHHhhccc---ceEE---EEecCCCcceeehhhcCccCCcceEEEEEeecCCCcc
Confidence 999 555544 7789999999999 8884 6999999999999874 45799999999999999
Q ss_pred EEcccccccCcCCCCCCCCcEEEeCCCCCCCCCCCCCchhhhhhhccCCCCCcceeeeccccccH
Q 011505 247 YVERAQAIPKWHGVPSKSGEMVINMEWGDFRSSHLSLSEYDNALDAESLNPGEQIFEKMISGMYL 311 (484)
Q Consensus 247 yie~~~~i~k~~~~~~~~g~miIN~EwG~f~~~~lp~T~~D~~lD~~s~npg~q~fEkm~SG~YL 311 (484)
++.+++.+.+.++.+++.+||.++.+.-.| .|++. +|+|.++|+..|
T Consensus 133 ii~~g~i~~G~~~~aGeigh~~~~~~~~~c----------------~cG~~--GClE~~~S~~Al 179 (179)
T PF00480_consen 133 IIINGKIYRGSNGFAGEIGHMPVDPNGEPC----------------YCGNR--GCLETYASGRAL 179 (179)
T ss_dssp EEETTEEETTTTS-TTGGGGSBSSTTSSB-----------------TTSSB--SBHHHHHSHHHH
T ss_pred eecccccccCCCccccceeeeeccCCCCcC----------------CCCCc--CcHHHhhChhhC
Confidence 999999999999989999999998773334 26666 699999999865
|
This family, known as ROK (Repressor, ORF, Kinase) includes the xylose operon repressor, xylR, from Bacillus subtilis, Lactobacillus pentosus and Staphylococcus xylosus; N-acetylglucosamine repressor, nagC, from Escherichia coli; glucokinase 2.7.1.2 from EC from Streptomyces coelicolor; fructokinase 2.7.1.4 from EC from Pediococcus pentosaceus, Streptococcus mutans and Zymomonas mobilis; allokinase 2.7.1.55 from EC and mlc from E. coli; and E. coli hypothetical proteins yajF and yhcI and the corresponding Haemophilus influenzae proteins. The repressor proteins (xylR and nagC) from this family possess an N-terminal region not present in the sugar kinases and which contains an helix-turn-helix DNA-binding motif.; PDB: 2GUP_A 3LM2_B 3EO3_A 2YHY_A 2YHW_A 2YI1_A 3MCP_A 1Z05_A 3HTV_A 3OHR_A .... |
| >TIGR00749 glk glucokinase, proteobacterial type | Back alignment and domain information |
|---|
Probab=99.69 E-value=6.1e-16 Score=157.61 Aligned_cols=293 Identities=14% Similarity=0.126 Sum_probs=167.6
Q ss_pred EEEEeCCceEEEEEEEeCCCcceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCceeeeeeee
Q 011505 98 YALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGFTFS 177 (484)
Q Consensus 98 laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~lGftFS 177 (484)
|++|+||||+|+++++.++. ++.. .+.++. +.++.+.+.|.+|+++..... .......|+..+
T Consensus 1 l~~DIGGT~i~~glvd~~g~---~l~~----~~~~~~-------~~~~~l~~~i~~~l~~~~~~~---~~~~~~~~Igi~ 63 (316)
T TIGR00749 1 LVGDIGGTNARLALCEIAPG---EISQ----AKTYSG-------LDFPSLEAVVRVYLEEHKVEL---KDPIAKGCFAIA 63 (316)
T ss_pred CeEecCcceeeEEEEecCCC---ceee----eEEEec-------CCCCCHHHHHHHHHHhccccc---CCCcCeEEEEEe
Confidence 58999999999999987553 2221 111111 124556666667766532110 011345888999
Q ss_pred eeeeeeecCceEE-ECccHHHHHHHHHHhcCCCceEEEEEechHHHHhcc--------ccc----CCCcEEEEEEccCcc
Q 011505 178 FPVMQTSINTGTL-VGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGG--------RYT----NKDVVAAVILGTGSN 244 (484)
Q Consensus 178 fPv~q~~~~~G~l-~G~dv~~~L~~al~r~gl~v~v~alvNDtvatlla~--------~y~----~~~~~iglIlGTG~N 244 (484)
.|++.......-+ -..++. .|++.+ +++ .+.|+||.++..+++ .|. ..++.+.+++||||+
T Consensus 64 Gpv~~~~v~~~nl~w~~~~~-~l~~~~---g~~--~V~l~ND~naaa~ge~~l~~~~~~~~g~~~~~~~~~~v~lGtGtG 137 (316)
T TIGR00749 64 CPITGDWVAMTNHTWAFSIA-ELKQNL---GFS--HLEIINDFTAVSYAIPGLKKEDLIQFGGAEPVEGKPIAILGAGTG 137 (316)
T ss_pred CcccCCEEEecCCCCeeCHH-HHHHhc---CCC--eEEEEecHHHHHcCCCCCCHHHeEEeCCCCCCCCCcEEEEecCCC
Confidence 9985321111001 113563 666656 763 246999999999998 554 346678999966665
Q ss_pred eEE--Ec---ccccccCcCCCCCCCCcEEEeCCCCCCCCCCCCCchhhhhhhccCCCCCcceeeeccccccHHHHHHHHH
Q 011505 245 AAY--VE---RAQAIPKWHGVPSKSGEMVINMEWGDFRSSHLSLSEYDNALDAESLNPGEQIFEKMISGMYLGEIVRRVL 319 (484)
Q Consensus 245 a~y--ie---~~~~i~k~~~~~~~~g~miIN~EwG~f~~~~lp~T~~D~~lD~~s~npg~q~fEkm~SG~YLgei~R~il 319 (484)
.+. +. +++.+ ..++|.|||.+... +.- . ..+...+...+ +..|+|.++||+.|.++.|...
T Consensus 138 ~G~~~vi~~~~g~l~----~~agE~GH~~~~~~-~~~---~---~~~~~~l~~~~---~~g~~E~~~Sg~gl~~~~~~~~ 203 (316)
T TIGR00749 138 LGVAHLIHQVDGRWV----VLPGEGGHVDFAPN-SEL---E---AIILEYLRAKI---GHVSAERVLSGPGLVNIYEALV 203 (316)
T ss_pred ceeeEEEEcCCCCEE----ECCCCcccccCCCC-CHH---H---HHHHHHHHHhc---CCceeeeeecHHHHHHHHHHHH
Confidence 553 55 44443 34668888877432 100 0 00001112234 3469999999999988877653
Q ss_pred HHHHhccccCCCCCCCCCCCCCccChhhhhhcccCCCCChHHHHHHHHHhhCCCCCCHHHHHHHH-HHHHHHHHHHHHHH
Q 011505 320 LRMAQEAAFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIV-ELCNIVATRGARLA 398 (484)
Q Consensus 320 ~~~~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~-~i~~~V~~RaA~l~ 398 (484)
... + ..... .... +.+ ..+.+++. ++..+ .+|..++++.++++
T Consensus 204 ~~~---~--------~~~~~----------~~~~---~~~-~~~~I~~a-----------a~~Gdd~~A~~~~~~~~~~l 247 (316)
T TIGR00749 204 KAD---P--------ERQFN----------KLPQ---ENL-KPKDISER-----------ALAGSCTDCRRALSLFCVIY 247 (316)
T ss_pred hhc---C--------ccccc----------cccc---ccC-CHHHHHHH-----------HHcCCCHHHHHHHHHHHHHH
Confidence 211 1 00000 0000 000 12344443 55565 89999999999999
Q ss_pred HHHHHHHHHHhCCCCcCCCCCcceEEEEeceeeccchhHHH-HHHHHHHHH--hccc-CCccEEEEEcCChhHHHHH
Q 011505 399 AAGILGVLKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSK-CLENTLEEL--LGEE-LFKNIVIEHSNDGSGIGAA 471 (484)
Q Consensus 399 Aa~iaaii~~~~~~~~~~~~~~~~~I~vdGsv~~~~p~f~~-~l~~~l~~l--~~~~-~~~~v~i~~~~Dgs~iGAA 471 (484)
|.++++++..++|.. .++..+|.+.+.-+.+.+ .+.+.+++. +.+- ..-.|.++..++.+++|||
T Consensus 248 g~~i~nl~~~ldpeg--------gv~v~GG~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~pv~~i~~~~~~l~G~~ 316 (316)
T TIGR00749 248 GRFAGNLALNLGTRG--------GVYIAGGIVPRFIEFFKASGFRAAFEDKGRMKEYVHDIPVYVVLHDNPGLLGAG 316 (316)
T ss_pred HHHHHHHHHHhCCCC--------cEEEECcHHHhHHhhhCchHHHHHHhccCChhHHHhhCCEEEEcCCCccccCCC
Confidence 999999999999831 344444444344444443 344443321 0000 1235778889999999985
|
This model represents glucokinase of E. coli and close homologs, mostly from other proteobacteria, presumed to have equivalent function. This glucokinase is more closely related to a number of uncharacterized paralogs than to the glucokinase glcK (fromerly yqgR) of Bacillus subtilis and its closest homologs, so the two sets are represented by separate models. |
| >PTZ00288 glucokinase 1; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=5.1e-12 Score=132.29 Aligned_cols=328 Identities=15% Similarity=0.087 Sum_probs=185.6
Q ss_pred HHHHHHHHHHhhcCCCCCCcceeecccccCCCCCceeeEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeecCCCcccc
Q 011505 59 ADAMTVEMHAGLASEGGSKLKMIISYVDNLPTGDEKGTYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTG 138 (484)
Q Consensus 59 ~~~f~~em~~gL~~~~~s~l~Mlpt~v~~lP~G~E~G~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~ 138 (484)
...+.+++.+-|+++. +| +--+++++.|+||||.|+++.++...+...... ..++.+ ++..
T Consensus 5 ~~~~~~~~~~~~~~~~--------~~-------~~~~~~~~~DiGgt~~R~~~~~~~~~~~~~~~~--~~~~~~--~~~~ 65 (405)
T PTZ00288 5 DEIFLEQLAEELKTDA--------SW-------SSGPIFVGCDVGGTNARVGFAREVQHDDSGVHI--IYVRFN--VTKT 65 (405)
T ss_pred hHHHHHHHHHHhccCc--------cc-------ccCCeEEEEEecCCceEEEEEeccCCCCCceeE--EEEecc--cccc
Confidence 3456677777776531 12 122479999999999999999983221111211 123444 1123
Q ss_pred CcchhHHHHHHHHHHHHhhcccccccCCCCceeeeeeeeeeeeeeec--------CceEEECccHHHHHHHHHHhcCCCc
Q 011505 139 TSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGFTFSFPVMQTSI--------NTGTLVGRDVVEELSRAMAKQGLDM 210 (484)
Q Consensus 139 ~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~lGftFSfPv~q~~~--------~~G~l~G~dv~~~L~~al~r~gl~v 210 (484)
+..++.+++++.+....+.... . ..+....|....|+..... +...+.+.+- .+ ++.
T Consensus 66 ~~~~~~~~~~~~~~~l~~~~~~-~----~~~~~a~iAvAGPV~~~~~~~~~~~~~~~~~lTNlpw--~i--------~~~ 130 (405)
T PTZ00288 66 DIRELLEFFDEVLQKLKKNLSF-I----QRVAAGAISVPGPVTGGQLAGPFNNLKGIARLTDYPV--EL--------FPP 130 (405)
T ss_pred cHHHHHHHHHHHHHHHHhcCcc-c----cCcCeEEEEEeCceeCCEeeccccccccccccCCCCc--hh--------cCC
Confidence 4567888888777776543210 0 2234457778889963322 0001122211 01 334
Q ss_pred eEEEEEechHHHHhccccc--------------------------------CCCcEEEEEEccCcceEEEcccccccCcC
Q 011505 211 SVSALVNDTVGTLAGGRYT--------------------------------NKDVVAAVILGTGSNAAYVERAQAIPKWH 258 (484)
Q Consensus 211 ~v~alvNDtvatlla~~y~--------------------------------~~~~~iglIlGTG~Na~yie~~~~i~k~~ 258 (484)
.-+.++||=.|..++.... .....+.+.+|||.++|++.+...+.++.
T Consensus 131 ~~~~liNDfeA~aygi~~l~~~~~~~~~f~~~~~~~~~~~l~~~~~~g~~~~~~~~~Vlg~GTGLG~alli~~~l~~G~~ 210 (405)
T PTZ00288 131 GRSALLNDLEAGAYGVLAVSNAGRLSEYFKVMWKGTQWDALSEGKPAGSVIGRGRCMVLAPGTGLGSSLIHYVGVSDQYI 210 (405)
T ss_pred CeEEEEEhHHHHhCcccccChhhcccccccccccccceeeecCCCCCcccCCCCCEEEEEeccceeEEEEECCeecCCcc
Confidence 4467999998887765421 12345889999999999999988888888
Q ss_pred CCCCCCCcEEEeCCCCC-CCCCCCCCchhhhhhhcc-C-C--CCCcceeeeccccccHHHHHHHHHHHHHhccccCCCCC
Q 011505 259 GVPSKSGEMVINMEWGD-FRSSHLSLSEYDNALDAE-S-L--NPGEQIFEKMISGMYLGEIVRRVLLRMAQEAAFFGDTV 333 (484)
Q Consensus 259 ~~~~~~g~miIN~EwG~-f~~~~lp~T~~D~~lD~~-s-~--npg~q~fEkm~SG~YLgei~R~il~~~~~~~~lF~~~~ 333 (484)
..++|.|||.++.--+. +.. . ..-|.+.-... | + +...-++|.++||+.|..+.|.... .. .
T Consensus 211 ~~agEgGHv~~~~~~~~~~~~-g--~~l~~~l~~~~~~~g~~~~~~vs~E~v~SG~GL~~ly~~l~~----~~------~ 277 (405)
T PTZ00288 211 VIPLECGHLSISWPANEDSDY-V--QALAGYLASKALSKGIDSTVYPIYEDIVSGRGLEFNYAYEKR----GN------K 277 (405)
T ss_pred cccccccceeeccCCCCccch-h--HHHHHHHHhhhccccccccCceeEeEEecHHHHHHHHHHHhc----cC------C
Confidence 88889999988531111 100 0 00000110000 0 0 0012389999999999777664311 00 0
Q ss_pred CCCCCCCCccChhhhhhcccCCCCChHHHHHHHHHhhCCCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 011505 334 PPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRK-TIVELCNIVATRGARLAAAGILGVLKKMGRD 412 (484)
Q Consensus 334 ~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~-~~~~i~~~V~~RaA~l~Aa~iaaii~~~~~~ 412 (484)
++ +... ....+.+. +. ..+..|..++++.++++|.++..++..++|
T Consensus 278 ~~----~~~~-----------------~~a~ia~~-----------A~~~gD~~A~~al~~f~~~LG~~~~nlal~l~P- 324 (405)
T PTZ00288 278 PS----APLK-----------------EAAEVAKL-----------AKYGSDVAAVKAMKRHYKYLMRLAAEISMQFLP- 324 (405)
T ss_pred Cc----cCcC-----------------CHHHHHHH-----------HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC-
Confidence 00 0000 11222221 11 134788999999999999999999999998
Q ss_pred CcCCCCCcceEEEEeceeeccc-hhHHH-----HHHHHH-------HHHhcccCCccEEE-EEcCChhHHHHHHHHHHhc
Q 011505 413 AAKDGDKQKTVIAMDGGLYEHY-AEYSK-----CLENTL-------EELLGEELFKNIVI-EHSNDGSGIGAALLAASHS 478 (484)
Q Consensus 413 ~~~~~~~~~~~I~vdGsv~~~~-p~f~~-----~l~~~l-------~~l~~~~~~~~v~i-~~~~Dgs~iGAAl~Aa~~~ 478 (484)
..|.+.||...+. |.|.+ .++... .+++. .-.|.+ +...+-+++|||..|...+
T Consensus 325 ---------~~VvIgGGi~~~~~~~l~~~~~~~f~~~f~~~~k~~r~~~l~---~ipv~~qv~~~~~gL~Gaa~~a~~~~ 392 (405)
T PTZ00288 325 ---------LTVVLMGDNIVYNSFFFDNPENVKQLQARITEHKMERLKFLS---RTTFLRQKKSVNLNLLGCLQFGSQLS 392 (405)
T ss_pred ---------CEEEEECccHHhhHHHHhccchHHHHHHHHhcCccChHHHHh---cCceEEEEeCCCccHHHHHHHHHHhh
Confidence 3366666554433 33321 222211 12221 124544 6688999999998886433
|
|
| >KOG1794 consensus N-Acetylglucosamine kinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.31 E-value=8.7e-10 Score=108.00 Aligned_cols=316 Identities=19% Similarity=0.221 Sum_probs=184.1
Q ss_pred eeeEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCceeee
Q 011505 94 KGTYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELG 173 (484)
Q Consensus 94 ~G~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~lG 173 (484)
.|.|.++|=|+|.-|+.+|+..++ +.... ..--++......+..-+.|++.|.+-..+.+.+. ......||
T Consensus 2 ~~~y~GvEGgaT~s~~Vivd~~~~---~~~~a---~~~~Tnh~~ig~~~~~~rie~~i~~A~~k~g~d~---~~~lr~lg 72 (336)
T KOG1794|consen 2 KDFYGGVEGGATCSRLVIVDEDGT---ILGRA---VGGGTNHWLIGSTTCASRIEDMIREAKEKAGWDK---KGPLRSLG 72 (336)
T ss_pred CceeEeecCCcceeEEEEECCCCC---EeeEe---eccccccccCCchHHHHHHHHHHHHHHhhcCCCc---cCccceee
Confidence 468999999999999999987775 33221 1111111111234455666666666655555432 12256788
Q ss_pred eeeeeeeeeeecCceEEECccHHHHHHHHHHhcCCCceEEEEEechHHHHhcccccCCCcEEEEEEccCcceEEEccccc
Q 011505 174 FTFSFPVMQTSINTGTLVGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRYTNKDVVAAVILGTGSNAAYVERAQA 253 (484)
Q Consensus 174 ftFSfPv~q~~~~~G~l~G~dv~~~L~~al~r~gl~v~v~alvNDtvatlla~~y~~~~~~iglIlGTG~Na~yie~~~~ 253 (484)
..||.- +|.+ .++++++.|++.+. ++ ++=..|.||+.+++++. +.....=|-+|-|||+|+=.+.+-..
T Consensus 73 L~lSg~-d~e~------~~~~lv~~~R~~fp--s~-ae~~~v~sDa~~sl~a~-t~g~~~GiVLiaGTgs~crl~~~DGs 141 (336)
T KOG1794|consen 73 LGLSGT-DQED------KNRKLVTEFRDKFP--SV-AENFYVTSDADGSLAAA-TPGGEGGIVLIAGTGSNCRLVNPDGS 141 (336)
T ss_pred eecccC-Cchh------HHHHHHHHHHHhcc--ch-hheeeeehhHHHHHhhc-CCCCCCcEEEEecCCceeEEECCCCC
Confidence 888864 3332 23445555555542 11 23357999999999887 44445668899999999866665443
Q ss_pred ccCcCCCCCCCCcEEEeCCCC-CCCCCCCCCchhhhhhhccCCCCCcceeeeccccccHHHHHHHHHHHHHhccccCCCC
Q 011505 254 IPKWHGVPSKSGEMVINMEWG-DFRSSHLSLSEYDNALDAESLNPGEQIFEKMISGMYLGEIVRRVLLRMAQEAAFFGDT 332 (484)
Q Consensus 254 i~k~~~~~~~~g~miIN~EwG-~f~~~~lp~T~~D~~lD~~s~npg~q~fEkm~SG~YLgei~R~il~~~~~~~~lF~~~ 332 (484)
..+. +.-|||+= .|| .|+-. +|-+---+|.+- -||-|. .=-+.+...+.++. .
T Consensus 142 ~~~~----ggwg~~iG--d~GSaywia---~~Avq~vfda~d------g~e~~~---~~i~~v~~tif~~~--------~ 195 (336)
T KOG1794|consen 142 EKGA----GGWGHMIG--DGGSAYWIA---RQAVQMVFDAED------GFENMM---DKIKDVKQTIFKHF--------N 195 (336)
T ss_pred ccCC----CCCCCccC--CCcchhhhh---hhhhhheeehhc------Cccccc---chHHHHHHHHHHHc--------C
Confidence 3332 23345554 455 56532 232222233221 122221 11122344444331 2
Q ss_pred CCCCCCCCCccChhhhhhcccCCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 011505 333 VPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELCNIVATRGARLAAAGILGVLKKMGRD 412 (484)
Q Consensus 333 ~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~i~~~V~~RaA~l~Aa~iaaii~~~~~~ 412 (484)
+++++.- +...-.| .+........++ + .+.+++++++++.|+++|+..+|--+.+++..+.+.
T Consensus 196 l~d~l~m--------l~~~Ys~--f~k~riA~f~~k-l------a~~ae~Gd~~~~~ifr~Ag~~Lg~~V~aVl~~l~~~ 258 (336)
T KOG1794|consen 196 LRDRLQM--------LEHLYSD--FDKHRIALFTEK-L------AEHAEIGDPLSAEIFRNAGETLGRHVVAVLPQLPPT 258 (336)
T ss_pred CCCHHHH--------HHHHHhc--chHHHHHHHHHH-H------HhhhhccCHHHHHHHHHHHHHHHHHHHHHHhhcCch
Confidence 2222110 1111111 111111111111 0 134778899999999999999999999999999884
Q ss_pred CcCCCCCcceEEEEeceeeccchhHHHHHHHHHHHHhcccCCccEEEEEcCChhHHHHHHHHHHhc
Q 011505 413 AAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVIEHSNDGSGIGAALLAASHS 478 (484)
Q Consensus 413 ~~~~~~~~~~~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~~~~~v~i~~~~Dgs~iGAAl~Aa~~~ 478 (484)
.. +....-|...|||+..++.+.+-....+... ..-+++++..-.+.|.+|||++||-..
T Consensus 259 ~k---~g~~l~Iv~vG~V~~Sw~~l~~Gfl~sls~~---~~f~~~~l~~~k~ssAvgAA~laa~~~ 318 (336)
T KOG1794|consen 259 LK---KGKTLPIVCVGGVFDSWDLLQEGFLDSLSDT---RGFERVELYRPKESSAVGAAILAASLD 318 (336)
T ss_pred hc---ccCcceEEEEcchhhHHHHHHHHHHHHhhcc---cCccceEEEeecccchHHHHHHhhhhc
Confidence 21 1134679999999999998888777766542 223468888888999999999998543
|
|
| >PF01869 BcrAD_BadFG: BadF/BadG/BcrA/BcrD ATPase family; InterPro: IPR002731 This domain is found in the BadF (O07462 from SWISSPROT) and BadG (O07463 from SWISSPROT) proteins that are two subunits of Benzoyl-CoA reductase, that may be involved in ATP hydrolysis | Back alignment and domain information |
|---|
Probab=99.22 E-value=2.2e-09 Score=106.92 Aligned_cols=271 Identities=21% Similarity=0.254 Sum_probs=160.0
Q ss_pred EEEEeCCceEEEEEEEeCCCcceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCceeeeeeee
Q 011505 98 YALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGFTFS 177 (484)
Q Consensus 98 laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~lGftFS 177 (484)
|+||.|||+.|+.+++.+|+ ++.+. ..-|.+......++..+.|.+-+.+.+++.+... .+...+.++.+
T Consensus 1 lGIDgGgTkt~~vl~d~~g~---il~~~---~~~~~n~~~~~~~~~~~~i~~~i~~~~~~~~~~~----~~i~~~~~g~a 70 (271)
T PF01869_consen 1 LGIDGGGTKTKAVLVDENGN---ILGRG---KGGGANYNSVGFEEAMENIKEAIEEALSQAGLSP----DDIAAICIGAA 70 (271)
T ss_dssp EEEEECSSEEEEEEEETTSE---EEEEE---EES-TTHHHHHHHHHHHHHHHHHHHHHHHHTTST----TCCCEEEEEEE
T ss_pred CEEeeChheeeeEEEeCCCC---EEEEE---EeCCCCCCCCCcchhhhHHHHHHHHHHHHcCCCc----cccceeeeeEe
Confidence 79999999999999998775 55322 3345555433456677788888888887765431 11222323332
Q ss_pred eeeeeeecCceEEECccHHHHHHHHHHhcCCCceEEEEEechHHHHhcccccCCCcEEEEEEccCcceEEEcccccccCc
Q 011505 178 FPVMQTSINTGTLVGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRYTNKDVVAAVILGTGSNAAYVERAQAIPKW 257 (484)
Q Consensus 178 fPv~q~~~~~G~l~G~dv~~~L~~al~r~gl~v~v~alvNDtvatlla~~y~~~~~~iglIlGTG~Na~yie~~~~i~k~ 257 (484)
+--. ......+.+.+-+. + +.+.||+...+.+..- +.-|-+|-|||+++..+.+
T Consensus 71 G~~~-----------~~~~~~~~~~~~~~--~---v~~~~Da~~al~~~~~---~~giv~I~GTGS~~~~~~~------- 124 (271)
T PF01869_consen 71 GYGR-----------AGDEQEFQEEIVRS--E---VIVVNDAAIALYGATA---EDGIVVIAGTGSIAYGRDR------- 124 (271)
T ss_dssp EEEE-----------TTTTTHHHHHHHHH--E---EEEEEHHHHHHHHHST---SSEEEEEESSSEEEEEEET-------
T ss_pred eecC-----------cccccchhhcceEE--E---EEEEHHHHHHhCCCCC---CcEEEEEcCCCceEEEEEc-------
Confidence 2211 01111222222211 2 5699999888777644 4678899999999988762
Q ss_pred CCCCCCCCcEEEeCCCCCCCCCCCCCchhhhhhhccCCCCCcceeeeccccccHHHHHHHHHHHHHhccccCCCCCCCCC
Q 011505 258 HGVPSKSGEMVINMEWGDFRSSHLSLSEYDNALDAESLNPGEQIFEKMISGMYLGEIVRRVLLRMAQEAAFFGDTVPPKL 337 (484)
Q Consensus 258 ~~~~~~~g~miIN~EwG~f~~~~lp~T~~D~~lD~~s~npg~q~fEkm~SG~YLgei~R~il~~~~~~~~lF~~~~~~~l 337 (484)
.|++.-.--||.|- ..- -||.++| |+.|....++-. +..++..
T Consensus 125 ------~g~~~r~gG~G~~~-----------------gD~--------GSg~~ig---~~~L~~~~~~~d---~~~~~~~ 167 (271)
T PF01869_consen 125 ------DGRVIRFGGWGHCL-----------------GDE--------GSGYWIG---RRALRAVLRELD---GRAEPTP 167 (271)
T ss_dssp ------TSEEEEEEESCTTT-----------------TTT--------TSHHHHH---HHHHHHHHHHHT---TSSTTSH
T ss_pred ------CCcEEEeCCCCCCc-----------------CCC--------CcHHHHH---HHHHhHHHHHhc---CccccCc
Confidence 34455555677552 111 2555654 455554443311 0111111
Q ss_pred CCCCccChhhhhhcccCCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCC
Q 011505 338 EVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELCNIVATRGARLAAAGILGVLKKMGRDAAKDG 417 (484)
Q Consensus 338 ~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~i~~~V~~RaA~l~Aa~iaaii~~~~~~~~~~~ 417 (484)
..+ ......++.+ +..++ +.++..+.+|..|++++++.++.-+.+++.+.....
T Consensus 168 ~~~-~~~~~~~A~f----------a~~v~-----------~~a~~gd~~a~~Il~~a~~~la~~i~~~~~~~~~~~---- 221 (271)
T PF01869_consen 168 YAK-PASNARIAVF----------APTVF-----------EAAQQGDEVARDILAEAADELAELIKAVLKRLGPEK---- 221 (271)
T ss_dssp HHH-TT-HHHHHCT----------HHHHH-----------HHHHTTTHHHHHHHHHHHHHHHHHHHHHHHTCTCCC----
T ss_pred ccC-CCChhheehh----------hHHHH-----------HHHHcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC----
Confidence 000 0011111111 11222 235667899999999999999999999999887632
Q ss_pred CCcceEEEEeceeeccchhHHHHHHHHHHHHhcccCCccEEEEEcCChhHHHHHHHH
Q 011505 418 DKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVIEHSNDGSGIGAALLA 474 (484)
Q Consensus 418 ~~~~~~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~~~~~v~i~~~~Dgs~iGAAl~A 474 (484)
..|.+-||++++.+ |++.+++.+++.+... ....+...+.-+.+|||++|
T Consensus 222 ----~~v~l~GGv~~~~~-~~~~l~~~l~~~~~~~--~~~~~~~~~~~~a~GAallA 271 (271)
T PF01869_consen 222 ----EPVVLSGGVFKNSP-LVKALRDALKEKLPKV--PIIIPVEPQYDPAYGAALLA 271 (271)
T ss_dssp ----CSEEEESGGGGCHH-HHHHHGGGS-HHHHCC--TCECECCGSSHHHHHHHHHH
T ss_pred ----CeEEEECCccCchH-HHHHHHHHHHHhcCCC--ceEECCCCCccHHHHHHHhC
Confidence 22999999998765 5566777777665542 12344567888999999987
|
The family also includes an activase subunit from the enzyme 2-hydroxyglutaryl-CoA dehydratase (P11568 from SWISSPROT). The hypothetical protein AQ_278 from Aquifex aeolicus O66634 from SWISSPROT contains two copies of this region suggesting that the family may structurally dimerise.; PDB: 2E2N_B 2E2Q_A 2E2P_B 2E2O_A 1ZBS_A 2CH6_A 2CH5_D 1ZC6_A 1HUX_A. |
| >TIGR02707 butyr_kinase butyrate kinase | Back alignment and domain information |
|---|
Probab=98.91 E-value=1.2e-07 Score=98.14 Aligned_cols=276 Identities=12% Similarity=0.070 Sum_probs=152.6
Q ss_pred eEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeecCCCccccCcchhHHHHH---HHHHHHHhhcccccccCCCCceee
Q 011505 96 TYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIA---AELAKFVSQESEEFKLSPGRQREL 172 (484)
Q Consensus 96 ~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia---~~i~~fl~~~~~~~~~~~~~~~~l 172 (484)
+.|+|..|||++|+++++-++. +.++. ..++.-..++++...+.++ +.|.+++++++... .+...+
T Consensus 1 ~il~in~Gsts~k~alf~~~~~---~~~~~----~~~~~~~~~~~~~~~~q~~~r~~~i~~~l~~~~~~~----~~i~av 69 (351)
T TIGR02707 1 KILVINPGSTSTKLAVFEDERP---LFEET----LRHSVEELGRFKNVIDQFEFRKQVILQFLEEHGISI----SKLDAV 69 (351)
T ss_pred CEEEEecCchhheEEEEeCCCc---eeeee----ecCCHHHhcccccHHHHHHHHHHHHHHHHHHcCCCc----ccccEE
Confidence 3699999999999999987663 44321 1122111235567778888 88888998775431 122223
Q ss_pred eeeeeeeeeeeecCceE-EECccHHHHHH----------------HHHH-hcCCCceEEEEEec---------hHHHHhc
Q 011505 173 GFTFSFPVMQTSINTGT-LVGRDVVEELS----------------RAMA-KQGLDMSVSALVND---------TVGTLAG 225 (484)
Q Consensus 173 GftFSfPv~q~~~~~G~-l~G~dv~~~L~----------------~al~-r~gl~v~v~alvND---------tvatlla 225 (484)
-.-..|++. ...|. ++..++.+.|+ ..+. ..++|. ++.|| +..+.+.
T Consensus 70 -~~RgG~~~~--v~Gg~~~v~~~~~~~l~~~~~~~~~hn~~~~~~~~~~~~~~~p~---~vfDt~fh~~~~~~a~~~alp 143 (351)
T TIGR02707 70 -VGRGGLLKP--IPGGTYLVNEAMLEDLKSGKRGEHASNLGAIIANELADELNIPA---YIVDPVVVDEMEDVARISGLP 143 (351)
T ss_pred -EECCCCCce--ecceeEEECHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHcCCCE---EEcCChhhhcChHHHHHhccc
Confidence 122333331 11122 12222222222 2221 236663 47777 4555453
Q ss_pred cc------------c----------cC--CCcEEEEEEccCcceEEEcccccccCcCCCCCCCCcEEEeCCCCCCCCCCC
Q 011505 226 GR------------Y----------TN--KDVVAAVILGTGSNAAYVERAQAIPKWHGVPSKSGEMVINMEWGDFRSSHL 281 (484)
Q Consensus 226 ~~------------y----------~~--~~~~iglIlGTG~Na~yie~~~~i~k~~~~~~~~g~miIN~EwG~f~~~~l 281 (484)
+. | .+ ....|.+.||||+++|.+.+++.+.+..+.+++.++|. +-+|..+
T Consensus 144 e~~RrygfHgls~~~v~~~~~~~~g~~~~~~~~I~~hLGtGig~~ai~~Gk~vdgs~G~agEg~~~~--tr~G~id---- 217 (351)
T TIGR02707 144 EIERKSIFHALNQKAVARRIAKELGKRYEEMNLIVAHMGGGISVAAHRKGRVIDVNNALDGEGPFSP--ERSGTLP---- 217 (351)
T ss_pred hhhhhhchhhhhHHHHHHHHHHHcCCCcccCCEEEEEeCCCceeeeEECCEEEEcCCCCCCcCCccc--CccCCCC----
Confidence 22 0 12 33899999999999999999998888777666544443 2233221
Q ss_pred CCchhhhhhhccCCCCCcceeeeccccccHHHHHHHHHHHHHhccccCCCCCCCCCCCCCccChhhhhhcccCCCCChHH
Q 011505 282 SLSEYDNALDAESLNPGEQIFEKMISGMYLGEIVRRVLLRMAQEAAFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKV 361 (484)
Q Consensus 282 p~T~~D~~lD~~s~npg~q~fEkm~SG~YLgei~R~il~~~~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~ 361 (484)
....... ..+.+. .+.| +...+.+...|.+- . .+.+
T Consensus 218 -~~~~~~~--~~~~~~--s~~e--------------l~~~l~~~sGl~~~------~--gs~d----------------- 253 (351)
T TIGR02707 218 -LGDLVDL--CYSGKY--TKEE--------------MKKKIVGNGGLVAY------L--GTND----------------- 253 (351)
T ss_pred -chhHHHH--HhcCCC--CHHH--------------HHHHHHhccCcccc------c--CCCC-----------------
Confidence 0000000 012221 1212 11112222222110 0 0011
Q ss_pred HHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCcceEEEEeceeeccchhHHHHH
Q 011505 362 VETKLKDILEISSTSLSMRKTIVELCNIVATRGARLAAAGILGVLKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCL 441 (484)
Q Consensus 362 ~~~il~~~~~~~~~~~~d~~~~~~i~~~V~~RaA~l~Aa~iaaii~~~~~~~~~~~~~~~~~I~vdGsv~~~~p~f~~~l 441 (484)
.+++++. ++..++.|+.+++..++.++.+|++++..++++ +..|.++||+.+. +.|++.+
T Consensus 254 ~reI~~~-----------a~~GD~~A~~a~d~~~~~la~~Ia~l~~~l~g~--------pD~IV~gGGI~e~-~~l~~~I 313 (351)
T TIGR02707 254 AREVEKR-----------IEAGDEKAKLILDAMAYQIAKEIGKMAVVLKGK--------VDAIVLTGGLAYS-KYFVSEI 313 (351)
T ss_pred HHHHHHH-----------HHCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCC--------CCEEEEcchhhcC-HHHHHHH
Confidence 2223222 334457888999999999999999999999431 1689999999874 6788999
Q ss_pred HHHHHHHhcccCCccEEEEEcCC
Q 011505 442 ENTLEELLGEELFKNIVIEHSND 464 (484)
Q Consensus 442 ~~~l~~l~~~~~~~~v~i~~~~D 464 (484)
.+.++.+. .|.+.++++
T Consensus 314 ~~~l~~~a------~v~~~pg~~ 330 (351)
T TIGR02707 314 IKRVSFIA------PVLVYPGED 330 (351)
T ss_pred HHHHHhhC------CEEEeCCcH
Confidence 99887753 465556543
|
This model represents an enzyme family in which members are designated either butryate kinase or branched-chain carboxylic acid kinase. The EC designation 2.7.2.7 describes an enzyme with relatively broad specificity; gene products whose context suggests a role in metabolism of aliphatic amino acids are likely to act as branched-chain carboxylic acid kinase. The gene typically found adjacent, ptb (phosphate butyryltransferase), likewise encodes an enzyme that may have a broad specificity that includes a role in aliphatic amino acid cabolism. |
| >PF02685 Glucokinase: Glucokinase; InterPro: IPR003836 Glucokinases 2 | Back alignment and domain information |
|---|
Probab=98.82 E-value=8.7e-07 Score=90.43 Aligned_cols=288 Identities=18% Similarity=0.147 Sum_probs=157.2
Q ss_pred EEEEeCCceEEEEEEEeCCCcceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCceeeeeeee
Q 011505 98 YALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGFTFS 177 (484)
Q Consensus 98 laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~lGftFS 177 (484)
|+-|+||||.|+++++..+...++... ++|+ ..+...|.+.+ .+|+++..... ..+....|...
T Consensus 1 Lv~DIGGTn~Rlal~~~~~~~~~~~~~--~~~~------~~~~~s~~~~l----~~~l~~~~~~~----~~p~~~~iavA 64 (316)
T PF02685_consen 1 LVADIGGTNTRLALAEPDGGPLQLIDI--RRYP------SADFPSFEDAL----ADYLAELDAGG----PEPDSACIAVA 64 (316)
T ss_dssp EEEEEETTEEEEEEEECTCGG-EEEEE--EEEE------GCCCCHHHHHH----HHHHHHTCHHH----TCEEEEEEEES
T ss_pred CeEEeCcccEEEEEEEcCCCCcccccc--EEEe------cCCcCCHHHHH----HHHHHhcccCC----CccceEEEEEe
Confidence 578999999999999987753222221 1222 22333444444 44554321111 23566888899
Q ss_pred eeeeeeecCceEEECcc---HHHHHHHHHHhcCCCceEEEEEechHHHHhccccc-------------C-CCcEEEEEEc
Q 011505 178 FPVMQTSINTGTLVGRD---VVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRYT-------------N-KDVVAAVILG 240 (484)
Q Consensus 178 fPv~q~~~~~G~l~G~d---v~~~L~~al~r~gl~v~v~alvNDtvatlla~~y~-------------~-~~~~iglIlG 240 (484)
.|++ .++-.+.+.+ -.+.|++.| +++ -+.|+||=.|..++.-.. . .....=+=.|
T Consensus 65 GPV~---~~~~~lTN~~W~i~~~~l~~~l---g~~--~v~liNDfeA~a~gl~~L~~~~l~~l~~g~~~~~~~~~Vig~G 136 (316)
T PF02685_consen 65 GPVR---DGKVRLTNLPWTIDADELAQRL---GIP--RVRLINDFEAQAYGLPALDPEDLVTLQPGEPDPGGPRAVIGPG 136 (316)
T ss_dssp S-EE---TTCEE-SSSCCEEEHHHCHCCC---T-T--CEEEEEHHHHHHHHHHHHHHCCECCHCCEESSTTS-EEEEEES
T ss_pred cCcc---CCEEEecCCCccccHHHHHHHh---CCc--eEEEEcccchheeccCCCCHHHeeeccCCCCCCCCcEEEEEcC
Confidence 9998 5555552222 123334433 664 257999998877654431 1 2233333478
Q ss_pred cCcceEEEcccccccCcCCCCCCCCcEEEeCCCCCCCCCCCCCchhhhhhh----ccCCCCCcceeeeccccccHHHHHH
Q 011505 241 TGSNAAYVERAQAIPKWHGVPSKSGEMVINMEWGDFRSSHLSLSEYDNALD----AESLNPGEQIFEKMISGMYLGEIVR 316 (484)
Q Consensus 241 TG~Na~yie~~~~i~k~~~~~~~~g~miIN~EwG~f~~~~lp~T~~D~~lD----~~s~npg~q~fEkm~SG~YLgei~R 316 (484)
||.|.|++.+. ..+..++-+|+|.-. .-|+|+.+.++= ..- +.=.+|..+||+.|..+.+
T Consensus 137 TGLG~a~l~~~-----------~~~~~v~~sEgGH~~--fap~~~~e~~l~~~l~~~~---~~vs~E~vlSG~GL~~ly~ 200 (316)
T PF02685_consen 137 TGLGVALLVPD-----------GDGYYVLPSEGGHVD--FAPRTDEEAELLRFLRRRY---GRVSVERVLSGRGLENLYR 200 (316)
T ss_dssp SSEEEEEEEEE-----------TTEEEEEEE-GGGSB-----SSHHHHHHHHHHHHHC---TS-BHHHCSSHHHHHHHHH
T ss_pred CCcEEEEEEec-----------CCceEeCCCcccccc--CCCCCHHHHHHHHHHHHhc---CCceeEeecchhhHHHHHH
Confidence 99999999863 235568999988543 246776665442 122 3348899999999976654
Q ss_pred HHHHHHHhccccCCCCCCCCCCCCCccChhhhhhcccCCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 011505 317 RVLLRMAQEAAFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELCNIVATRGAR 396 (484)
Q Consensus 317 ~il~~~~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~i~~~V~~RaA~ 396 (484)
-.... . ..++ .......|.+.-. ..-+.+|...++...+
T Consensus 201 ~l~~~----~-----~~~~----------------------~~~~~~~I~~~A~----------~~~d~~a~~al~~f~~ 239 (316)
T PF02685_consen 201 FLAGE----R-----GAEP----------------------PLLSAAEISAAAL----------EGGDPLAREALDLFAR 239 (316)
T ss_dssp HHHCC----T-----T--S--------------------------HHHHHHHHH----------CT--HHHHHHHHHHHH
T ss_pred HHHhc----c-----CCCC----------------------CCCCHHHHHHHHH----------cCCCHHHHHHHHHHHH
Confidence 43211 0 0000 0012223322211 1234889999999999
Q ss_pred HHHHHHHHHHHHhCCCCcCCCCCcceEEEEeceeeccchhHHH--HHHHHHHHH--hccc-CCccEEEEEcCChhHHHHH
Q 011505 397 LAAAGILGVLKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSK--CLENTLEEL--LGEE-LFKNIVIEHSNDGSGIGAA 471 (484)
Q Consensus 397 l~Aa~iaaii~~~~~~~~~~~~~~~~~I~vdGsv~~~~p~f~~--~l~~~l~~l--~~~~-~~~~v~i~~~~Dgs~iGAA 471 (484)
+++.....+.-...+. --|=+.||+..+...+.+ ...+.+.+. ..+- ..-.|.++..++.+++|||
T Consensus 240 ~lg~~agdlaL~~~a~---------gGvyiaGGI~~~~~~~l~~~~F~~~F~~kg~~~~~l~~iPv~li~~~~~gL~Gaa 310 (316)
T PF02685_consen 240 ILGRVAGDLALTFLAR---------GGVYIAGGIAPRLLPLLDESAFREAFEDKGRMSDLLEDIPVYLITDPDAGLLGAA 310 (316)
T ss_dssp HHHHHHHHHHHHHT-T---------CEEEEE-TTGGGGHHHHHCSSHHHHHH--GGGHHHHTT--EEEE--S-HHHHHHH
T ss_pred HHHHHHHHHHHHhCCC---------eeEEEecchhhHHHHHcChhHHHHHHhccCCcHHHHhcCcEEEEeCCCHHHHHHH
Confidence 9999999999988873 346788988876655443 122222110 0000 1136778889999999999
Q ss_pred HHHH
Q 011505 472 LLAA 475 (484)
Q Consensus 472 l~Aa 475 (484)
..|.
T Consensus 311 ~~a~ 314 (316)
T PF02685_consen 311 AYAR 314 (316)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8874
|
7.1.2 from EC are found in invertebrates and microorganisms and are highly specific for glucose. These enzymes phosphorylate glucose using ATP as a donor to give glucose-6-phosphate and ADP [].; GO: 0004340 glucokinase activity, 0005524 ATP binding, 0006096 glycolysis, 0051156 glucose 6-phosphate metabolic process; PDB: 1SZ2_B 1Q18_B 2Q2R_B. |
| >PRK03011 butyrate kinase; Provisional | Back alignment and domain information |
|---|
Probab=98.54 E-value=7.3e-06 Score=85.06 Aligned_cols=284 Identities=13% Similarity=0.153 Sum_probs=157.8
Q ss_pred eEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeecC-CCccc-cCcchhHHHHHHHHHHHHhhcccccccCCCCceeee
Q 011505 96 TYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIP-PHLMT-GTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELG 173 (484)
Q Consensus 96 ~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~ip-~~~~~-~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~lG 173 (484)
+.|+|+-|.|..|+++.+-. ..+..+. ...+ +++.. .+--+=++|=.+.|.+++++++.+. .+...+|
T Consensus 3 ~il~inpgststk~a~~~~~---~~~~~~~---~~h~~~~~~~~~~~~~q~~~r~~~i~~~l~~~g~~~----~~l~av~ 72 (358)
T PRK03011 3 RILVINPGSTSTKIAVFEDE---KPIFEET---LRHSAEELEKFKTIIDQYEFRKQAILDFLKEHGIDL----SELDAVV 72 (358)
T ss_pred EEEEEcCCCchheEEEEcCC---ceeeeec---cccCHHHHhcCCCccchHHHHHHHHHHHHHHcCCCh----hcceEEE
Confidence 58999999999999998522 2233221 2222 12211 1222446777788888998876432 1122221
Q ss_pred eeeeeeeeeeecCceEE-ECc----------------cHHHHHHHHHH-hcCCCceEEEEEec-----------------
Q 011505 174 FTFSFPVMQTSINTGTL-VGR----------------DVVEELSRAMA-KQGLDMSVSALVND----------------- 218 (484)
Q Consensus 174 ftFSfPv~q~~~~~G~l-~G~----------------dv~~~L~~al~-r~gl~v~v~alvND----------------- 218 (484)
.- ...++ .+..|+. ++. ++..++-..+. +.++| ++++|+
T Consensus 73 ~R-gG~~~--~v~gG~~~v~~~~~~~l~~~~~~~~~~nl~~~~a~~~~~~~~~p---~~v~D~~~~~~~~~~a~~~~lp~ 146 (358)
T PRK03011 73 GR-GGLLK--PIPGGTYRVNEAMLEDLKNGKYGEHASNLGAIIAYEIAKELGIP---AFIVDPVVVDEMEPVARISGLPE 146 (358)
T ss_pred Ec-CCCCc--ccCCCCEEcCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhcCCC---EEEECCcccccCCHHHHHcCCCC
Confidence 11 11111 0123322 112 33444433333 24677 467888
Q ss_pred ---------hHHHHhccccc-------CCCcEEEEEEccCcceEEEcccccccCcCCCCCCCCcEEEeCCCCCCCCCCCC
Q 011505 219 ---------TVGTLAGGRYT-------NKDVVAAVILGTGSNAAYVERAQAIPKWHGVPSKSGEMVINMEWGDFRSSHLS 282 (484)
Q Consensus 219 ---------tvatlla~~y~-------~~~~~iglIlGTG~Na~yie~~~~i~k~~~~~~~~g~miIN~EwG~f~~~~lp 282 (484)
++--.++++|. +..+.|.+.+|||+.+|.+.+++.+.+..+.+++...| .+-+|.. |
T Consensus 147 i~R~~gfHgln~~~va~~~a~~~g~~~~~~n~I~~hLGtGig~gai~~Gk~idgs~g~agEG~~~--~~R~G~l-----~ 219 (358)
T PRK03011 147 IERKSIFHALNQKAVARRVAKELGKKYEELNLIVAHLGGGISVGAHRKGRVIDVNNALDGEGPFS--PERAGGL-----P 219 (358)
T ss_pred cceeecchHHhHHHHHHHHHHHhCCCcccCcEEEEEeCCCceeeEEECCEEEecCCccCCCCCcc--cCcccCc-----C
Confidence 55555555551 24589999999999999999998888766654321111 1112221 1
Q ss_pred CchhhhhhhccCCCCCcceeeeccccccHHHHHHHHHHHHHhccccCCCCCCCCCCCCCccChhhhhhcccCCCCChHHH
Q 011505 283 LSEYDNALDAESLNPGEQIFEKMISGMYLGEIVRRVLLRMAQEAAFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVV 362 (484)
Q Consensus 283 ~T~~D~~lD~~s~npg~q~fEkm~SG~YLgei~R~il~~~~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~ 362 (484)
. + ...+.+-+|.|= ...+...+.+.+.+.+- + . +.+ .
T Consensus 220 ~--------------~-~~~~~~~~g~~s---~~~l~~~l~~~~Gl~~~-----~----------------g-s~d---~ 256 (358)
T PRK03011 220 V--------------G-DLVELCFSGKYT---KEELKKKLVGKGGLVAY-----L----------------G-TND---A 256 (358)
T ss_pred c--------------H-HHHHHHhcCCCC---HHHHHHHHHhccCcccc-----c----------------C-CCC---H
Confidence 1 1 112223334331 11122222323222110 0 0 011 2
Q ss_pred HHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCcceEEEEeceeeccchhHHHHHH
Q 011505 363 ETKLKDILEISSTSLSMRKTIVELCNIVATRGARLAAAGILGVLKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLE 442 (484)
Q Consensus 363 ~~il~~~~~~~~~~~~d~~~~~~i~~~V~~RaA~l~Aa~iaaii~~~~~~~~~~~~~~~~~I~vdGsv~~~~p~f~~~l~ 442 (484)
+++++. ++..++.|+.++++.++.+|-+|++++..++.+ +..|+++||+.+ .+.|++.++
T Consensus 257 reV~~~-----------a~~GD~~A~~ald~~~~~lak~I~~l~~~L~gd--------pD~IVlgGGI~~-~~~l~~~I~ 316 (358)
T PRK03011 257 REVEKR-----------IEEGDEKAKLVYEAMAYQIAKEIGAMAAVLKGK--------VDAIVLTGGLAY-SKRLVERIK 316 (358)
T ss_pred HHHHHH-----------HHCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCC--------CCEEEEeCcccc-CHHHHHHHH
Confidence 223222 334457889999999999999999999999321 168999999987 899999999
Q ss_pred HHHHHHhcccCCccEEEEEcCCh---hHHHHH
Q 011505 443 NTLEELLGEELFKNIVIEHSNDG---SGIGAA 471 (484)
Q Consensus 443 ~~l~~l~~~~~~~~v~i~~~~Dg---s~iGAA 471 (484)
+.++.+ ..+.+.+++++ ...||+
T Consensus 317 ~~l~~~------~pv~i~p~~~e~~A~a~GA~ 342 (358)
T PRK03011 317 ERVSFI------APVIVYPGEDEMEALAEGAL 342 (358)
T ss_pred HHHHhh------CCeEEEeCCCHHHHHHHHHH
Confidence 998865 25777776555 455544
|
|
| >smart00732 YqgFc Likely ribonuclease with RNase H fold | Back alignment and domain information |
|---|
Probab=98.50 E-value=3e-07 Score=77.10 Aligned_cols=98 Identities=18% Similarity=0.238 Sum_probs=63.5
Q ss_pred eEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCceeeeee
Q 011505 96 TYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGFT 175 (484)
Q Consensus 96 ~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~lGft 175 (484)
.+|+||+|||++++++++.+|. +... ..+++. .+.+++++.+.+.+.++ . +..+|+.
T Consensus 2 ~ilgiD~Ggt~i~~a~~d~~g~---~~~~----~~~~~~---~~~~~~~~~l~~~i~~~----~---------~~~i~Ig 58 (99)
T smart00732 2 RVLGLDPGRKGIGVAVVDETGK---LADP----LEVIPR---TNKEADAARLKKLIKKY----Q---------PDLIVIG 58 (99)
T ss_pred cEEEEccCCCeEEEEEECCCCC---EecC----EEEEEe---cCcchHHHHHHHHHHHh----C---------CCEEEEe
Confidence 4899999999999999987664 4432 223321 13456677776666542 1 3568888
Q ss_pred eeeeeeeeecCceEEECccHHHHHHHHHHhcCCCceEEEEEechHHHHhc
Q 011505 176 FSFPVMQTSINTGTLVGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAG 225 (484)
Q Consensus 176 FSfPv~q~~~~~G~l~G~dv~~~L~~al~r~gl~v~v~alvNDtvatlla 225 (484)
+++|++...... +. .++.+.|++.+ ++|+ .++||+++|..+
T Consensus 59 ~pg~v~g~~~~~--~~-~~l~~~l~~~~---~~pv---~~~nDa~st~~a 99 (99)
T smart00732 59 LPLNMNGTASRE--TE-EAFAELLKERF---NLPV---VLVDERLATVYA 99 (99)
T ss_pred CCcCCCCCcCHH--HH-HHHHHHHHHhh---CCcE---EEEeCCcccccC
Confidence 888885221101 14 66777777665 7884 699999988643
|
YqgF proteins are likely to function as an alternative to RuvC in most bacteria, and could be the principal holliday junction resolvases in low-GC Gram-positive bacteria. In Spt6p orthologues, the catalytic residues are substituted indicating that they lack enzymatic functions. |
| >COG2971 Predicted N-acetylglucosamine kinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.49 E-value=4.6e-05 Score=76.22 Aligned_cols=278 Identities=18% Similarity=0.168 Sum_probs=162.8
Q ss_pred eeeEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCceeee
Q 011505 94 KGTYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELG 173 (484)
Q Consensus 94 ~G~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~lG 173 (484)
.-+||+||=|||..|+.+-+.+|+ ++-+- ..=|.+..+...++-+.-|.+.|.+.+.+.+.++ ..++
T Consensus 4 ~~~~lGVDGGGTkt~a~l~~~~g~---vlg~g---~sGpAN~~~~~~e~A~~ni~~ai~~A~~~aG~~~-------~~i~ 70 (301)
T COG2971 4 MPYFLGVDGGGTKTRAVLADEDGN---VLGRG---KSGPANIQLVGKEEAVRNIKDAIREALDEAGLKP-------DEIA 70 (301)
T ss_pred ccEEEEEccCCcceEEEEEcCCCc---EEEEe---ccCCceecccchHHHHHHHHHHHHHHHHhcCCCH-------HHhC
Confidence 348999999999999998887775 55432 3447777665558889999999999998776432 2233
Q ss_pred eeeeeeeeeeecCceEEECccHHHHHHHHHHhcCCCce-EEEEEechHHHHhcccccCCCcEEEEEEccCcceEEEcccc
Q 011505 174 FTFSFPVMQTSINTGTLVGRDVVEELSRAMAKQGLDMS-VSALVNDTVGTLAGGRYTNKDVVAAVILGTGSNAAYVERAQ 252 (484)
Q Consensus 174 ftFSfPv~q~~~~~G~l~G~dv~~~L~~al~r~gl~v~-v~alvNDtvatlla~~y~~~~~~iglIlGTG~Na~yie~~~ 252 (484)
+++-+--- .|.+.....+ .+ .+.+|.- -+-|+||+..+|.++...+. =+-+|.||| ++|+-.
T Consensus 71 ~~~agla~---------ag~~~~~~~~-~~-~~~l~~a~~v~v~~Dg~iAl~ga~~~~~--Gii~i~GTG--Si~~~~-- 133 (301)
T COG2971 71 AIVAGLAL---------AGANVEEARE-EL-ERLLPFAGKVDVENDGLIALRGALGDDD--GIIVIAGTG--SIGYGR-- 133 (301)
T ss_pred ceeeeeec---------cCcchhHHHH-HH-HHhcCccceEEEecChHHHHhhccCCCC--CEEEEecCC--eEEEEE--
Confidence 33221110 2344322222 12 2345543 46799999999998855432 234577777 444432
Q ss_pred cccCcCCCCCCCCcEEEeCCCCCCCCCCCCCchhhhhhhccCCCCCcceeeeccccccHHHHHHHHHHHHHhccccCCCC
Q 011505 253 AIPKWHGVPSKSGEMVINMEWGDFRSSHLSLSEYDNALDAESLNPGEQIFEKMISGMYLGEIVRRVLLRMAQEAAFFGDT 332 (484)
Q Consensus 253 ~i~k~~~~~~~~g~miIN~EwG~f~~~~lp~T~~D~~lD~~s~npg~q~fEkm~SG~YLgei~R~il~~~~~~~~lF~~~ 332 (484)
..+....-=.||.+= =--.||.+||.- +|.+...+ |.+.
T Consensus 134 ----------~gg~~~r~GG~Gf~I-------------------------gDegSga~ig~~---~L~~~lra---~DG~ 172 (301)
T COG2971 134 ----------KGGRRERVGGWGFPI-------------------------GDEGSGAWIGRE---ALQEALRA---FDGR 172 (301)
T ss_pred ----------eCCeeEEecCcCccc-------------------------cccchHHHHHHH---HHHHHHHH---hcCC
Confidence 112333333677542 112588899744 33333221 1111
Q ss_pred CCCCCCCCCccChhhhhhcccCCCCChHHHHHHHHHhhCCCC--------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011505 333 VPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISS--------TSLSMRKTIVELCNIVATRGARLAAAGILG 404 (484)
Q Consensus 333 ~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~--------~~~~d~~~~~~i~~~V~~RaA~l~Aa~iaa 404 (484)
.+ .-.|....+..+.. |.+.+....... +..+ .-.+.++..+.++..|+++||.+++..+-+
T Consensus 173 ~~-----~t~L~d~v~~~f~~----d~edlv~~~y~a-~~~~~~ia~lap~V~~~A~~GD~~A~~Il~~aa~~i~~~~~~ 242 (301)
T COG2971 173 RE-----ATPLTDAVMAEFNL----DPEDLVAFIYKA-GPGDKKIAALAPAVFEAARKGDPVAIRILKEAAAYIATLLEA 242 (301)
T ss_pred cc-----CChHHHHHHHHhCC----CHHHHHHHHHhc-CCchHHHHHhhHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHH
Confidence 11 11244444444432 233333332220 1100 012567888999999999999777776666
Q ss_pred HHHHhCCCCcCCCCCcceEEEEeceeeccchhHHHHHHHHHHHHhcccCCccEEEEEcCChhHHHHHHHHH
Q 011505 405 VLKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVIEHSNDGSGIGAALLAA 475 (484)
Q Consensus 405 ii~~~~~~~~~~~~~~~~~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~~~~~v~i~~~~Dgs~iGAAl~Aa 475 (484)
+....+. ..+.+-||+++.++.|.+.+++.+. .+ . .+--..||.++|.
T Consensus 243 l~~~~g~----------~~l~l~GG~~~~~~~~~~~~~~~l~---~~-----~-----~~D~~~GA~~~A~ 290 (301)
T COG2971 243 LSIFNGS----------EKLSLLGGLAPSYPYYLSLFRRALL---VP-----P-----IGDALSGAVLLAL 290 (301)
T ss_pred HhcccCC----------ceEEEeccccccchhhHHHHHHHhc---CC-----c-----cccHHHHHHHHHH
Confidence 5432232 6899999999999999999988542 22 1 3445678877774
|
|
| >TIGR01314 gntK_FGGY gluconate kinase, FGGY type | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.0082 Score=65.30 Aligned_cols=60 Identities=12% Similarity=0.267 Sum_probs=42.7
Q ss_pred eEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeee--cCC-CccccCcchhHHHHHHHHHHHHhhc
Q 011505 96 TYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVS--IPP-HLMTGTSDALFDYIAAELAKFVSQE 158 (484)
Q Consensus 96 ~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~--ip~-~~~~~~~~~lfd~Ia~~i~~fl~~~ 158 (484)
++|+||+|+|++|+++++.+|+ ++...+.+++ .|. .....+.+++++.+.+++++.+++.
T Consensus 1 ~~lgiDiGtt~~K~~l~d~~g~---i~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~i~~~~~~~ 63 (505)
T TIGR01314 1 YMIGVDIGTTSTKAVLFEENGK---IVAKSSIGYPLYTPASGMAEENPEEIFEAVLVTIREVSINL 63 (505)
T ss_pred CEEEEeccccceEEEEEcCCCC---EEEEEEeecccccCCCCCeeeCHHHHHHHHHHHHHHHHHhC
Confidence 4799999999999999998775 5554443333 111 1223357789999999999998754
|
Gluconate is derived from glucose in two steps. This model describes one form of gluconate kinase, belonging to the FGGY family of carbohydrate kinases. Gluconate kinase phosphoryates gluconate for entry into the Entner-Douderoff pathway. |
| >COG0837 Glk Glucokinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.019 Score=57.61 Aligned_cols=182 Identities=20% Similarity=0.215 Sum_probs=107.9
Q ss_pred eeEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCceeeee
Q 011505 95 GTYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGF 174 (484)
Q Consensus 95 G~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~lGf 174 (484)
...|+=|+||||-|+++|.....+ ..+ + +.+...+ |..+.+.|++|+.++.. ..+..--|
T Consensus 6 ~p~LvgDIGGTnaRfaLv~~a~~~--~~~-------~-~~~~~~d----ypsle~av~~yl~~~~~------~~~~~a~~ 65 (320)
T COG0837 6 YPRLVGDIGGTNARFALVEIAPAE--PLQ-------A-ETYACAD----YPSLEEAVQDYLSEHTA------VAPRSACF 65 (320)
T ss_pred CceEEEecCCcceEEEEeccCCCC--ccc-------c-ceecccC----cCCHHHHHHHHHHHhhc------cCccceEE
Confidence 345666999999999999875431 111 0 1121111 44566777777776621 23455777
Q ss_pred eeeeeeeeeecCceEEECccHH---HHHHHHHHhcCCCceEEEEEechHHHHhcccccC-------------CCcEEEEE
Q 011505 175 TFSFPVMQTSINTGTLVGRDVV---EELSRAMAKQGLDMSVSALVNDTVGTLAGGRYTN-------------KDVVAAVI 238 (484)
Q Consensus 175 tFSfPv~q~~~~~G~l~G~dv~---~~L~~al~r~gl~v~v~alvNDtvatlla~~y~~-------------~~~~iglI 238 (484)
..-.|++ -+.-.+.+.|-+ +.+.+.| |++ =+.|+||=.+..++-.... ++-- =.|
T Consensus 66 AiAgPv~---gd~v~lTN~~W~~s~~~~r~~L---gl~--~v~liNDF~A~A~Ai~~l~~~dl~qigg~~~~~~a~-~av 136 (320)
T COG0837 66 AIAGPID---GDEVRLTNHDWVFSIARMRAEL---GLD--HLSLINDFAAQALAIPRLGAEDLEQIGGGKPEPNAP-RAV 136 (320)
T ss_pred EEecCcc---CCEEeeecCcccccHHHHHHhc---CCC--cEEEechHHHHHhhccccCHHHHHHhcCCCCCCCCc-eEE
Confidence 7788886 333333444421 2333444 664 2579999999888766531 1222 234
Q ss_pred E--ccCcceEEEcccccccCcCCCCCCCCcEEEeCCCCCCCCCCCCCchhhhhhhcc-CCCCCcceeeeccccccHHHHH
Q 011505 239 L--GTGSNAAYVERAQAIPKWHGVPSKSGEMVINMEWGDFRSSHLSLSEYDNALDAE-SLNPGEQIFEKMISGMYLGEIV 315 (484)
Q Consensus 239 l--GTG~Na~yie~~~~i~k~~~~~~~~g~miIN~EwG~f~~~~lp~T~~D~~lD~~-s~npg~q~fEkm~SG~YLgei~ 315 (484)
+ |||-+.|+..+.. .+...+-+|.|.- +.-|+|+-|.+|=+. ..+-|.-.-|...||+-|-.|-
T Consensus 137 lGPGTGLGVa~Lv~~~-----------~~w~~lp~EGGHv--df~P~~~~E~~i~~~l~~~~GrVS~Er~LSG~GL~~iY 203 (320)
T COG0837 137 LGPGTGLGVAGLVPNG-----------GGWIPLPGEGGHV--DFAPRSEREFQILEYLRARFGRVSAERVLSGPGLVNLY 203 (320)
T ss_pred EcCCCCcceEEEEecC-----------CeeEeccCCCccc--cCCCCCHHHHHHHHHHHHhcCccchhhhcccccHHHHH
Confidence 5 5566778776532 2356677786643 235888888876432 2234556789999999997665
Q ss_pred HHH
Q 011505 316 RRV 318 (484)
Q Consensus 316 R~i 318 (484)
|-+
T Consensus 204 ~al 206 (320)
T COG0837 204 RAL 206 (320)
T ss_pred HHH
Confidence 544
|
|
| >COG1070 XylB Sugar (pentulose and hexulose) kinases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.025 Score=61.57 Aligned_cols=62 Identities=15% Similarity=0.240 Sum_probs=44.9
Q ss_pred eeEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeecCCC---ccccCcchhHHHHHHHHHHHHhhc
Q 011505 95 GTYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPH---LMTGTSDALFDYIAAELAKFVSQE 158 (484)
Q Consensus 95 G~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~ip~~---~~~~~~~~lfd~Ia~~i~~fl~~~ 158 (484)
.++|+||+|.|+.|+.+++.++ ..++......+..... ....+.++++..+.+.|++.+++.
T Consensus 4 ~~~lgIDiGTt~~Kavl~d~~~--~~~~~~~~~~~~~~~~~~g~~e~d~~~~w~~~~~ai~~l~~~~ 68 (502)
T COG1070 4 KYVLGIDIGTTSVKAVLFDEDG--GEVVATARFENPVSTPQPGWAEQDPDELWQAILEALRQLLEES 68 (502)
T ss_pred cEEEEEEcCCCcEEEEEEeCCC--CeEEEEeeccccccCCCCCCcccCHHHHHHHHHHHHHHHHHhc
Confidence 3799999999999999999984 1255443322332211 223468999999999999999875
|
|
| >COG1069 AraB Ribulose kinase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.065 Score=57.75 Aligned_cols=75 Identities=16% Similarity=0.218 Sum_probs=57.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcCCCCCcceEEEEeceeeccchhHHHHHHHHHHHHhcccCCccEEEEEcCChhHHH
Q 011505 390 VATRGARLAAAGILGVLKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVIEHSNDGSGIG 469 (484)
Q Consensus 390 V~~RaA~l~Aa~iaaii~~~~~~~~~~~~~~~~~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~~~~~v~i~~~~Dgs~iG 469 (484)
+..+...-.|-|.-.|+..+.... ..-.+|-+-||. .++|.+.+.+-.... +.+.+..+++...+|
T Consensus 406 lY~a~l~a~A~GtR~Iie~~~~~g-----~~Id~l~~sGG~-~KN~llmql~aDvtg--------~~v~i~~s~~a~llG 471 (544)
T COG1069 406 LYRALLEATAFGTRAIIETFEDQG-----IAIDTLFASGGI-RKNPLLMQLYADVTG--------RPVVIPASDQAVLLG 471 (544)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHcC-----CeeeEEEecCCc-ccCHHHHHHHHHhcC--------CeEEeecccchhhhH
Confidence 344555667788888888886531 233678888888 999998887766542 478888899999999
Q ss_pred HHHHHHHhc
Q 011505 470 AALLAASHS 478 (484)
Q Consensus 470 AAl~Aa~~~ 478 (484)
+|+++|+++
T Consensus 472 sAm~~avAa 480 (544)
T COG1069 472 AAMFAAVAA 480 (544)
T ss_pred HHHHHHHHh
Confidence 999999877
|
|
| >TIGR01312 XylB D-xylulose kinase | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.074 Score=57.22 Aligned_cols=76 Identities=20% Similarity=0.302 Sum_probs=52.3
Q ss_pred EEEEeCCceEEEEEEEeCCCcceeEEeeeeeeec---CCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCceeeee
Q 011505 98 YALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSI---PPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGF 174 (484)
Q Consensus 98 laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~i---p~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~lGf 174 (484)
|+||+|.|++|+++++++|+ ++.+.+..++. ++.....+.+++++.+++++++++++.+.. ..+...+|+
T Consensus 1 lgIDiGtt~ik~~l~d~~g~---i~~~~~~~~~~~~~~~g~~e~d~~~~~~~l~~~i~~~~~~~~~~----~~~I~gIgv 73 (481)
T TIGR01312 1 LGIDLGTSGVKALLVDEQGE---VIASGSAPHTVISPHPGWSEQDPEDWWDATEEAIKELLEQASEM----GQDIKGIGI 73 (481)
T ss_pred CceeecCcceEEEEECCCCC---EEEEEeecccccCCCCCCeeeCHHHHHHHHHHHHHHHHHhcCCC----cccEEEEEE
Confidence 58999999999999998885 66443322321 111113357889999999999999876532 234566777
Q ss_pred e--eeeee
Q 011505 175 T--FSFPV 180 (484)
Q Consensus 175 t--FSfPv 180 (484)
+ -+.++
T Consensus 74 s~~~~g~v 81 (481)
T TIGR01312 74 SGQMHGLV 81 (481)
T ss_pred ecCCceeE
Confidence 7 66666
|
D-xylulose kinase (XylB) generally is found with xylose isomerase (XylA) and acts in xylose utilization. |
| >PRK00976 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.002 Score=65.67 Aligned_cols=79 Identities=20% Similarity=0.216 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCcceEEEEeceeeccchhHHHHHHHHHHHHhcccCCccEEE
Q 011505 380 RKTIVELCNIVATRGARLAAAGILGVLKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVI 459 (484)
Q Consensus 380 ~~~~~~i~~~V~~RaA~l~Aa~iaaii~~~~~~~~~~~~~~~~~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~~~~~v~i 459 (484)
++..+..|+.++++.++.+|.+|++++..++| ..|.++||+.+..+. .+.+.+++.+.+ . .-
T Consensus 233 A~~GD~~A~~aid~~~~~LA~~IAnLi~llDP----------e~IVLGGGVS~~~e~---~L~~~I~e~l~~----~-~a 294 (326)
T PRK00976 233 YEKGDEKAKLAIDTLALFVAMEIASLLLLNPE----------DNVVLAGSVGEMDEP---DVSERIKELLDK----K-VL 294 (326)
T ss_pred HHcCCHHHHHHHHHHHHHHHHHHHHHHHhcCC----------CEEEEcCccccCchh---HHHHHHHHHhcc----c-cc
Confidence 44456789999999999999999999999988 689999999976533 355555554433 1 35
Q ss_pred EEcCChhHHHHHHHHHH
Q 011505 460 EHSNDGSGIGAALLAAS 476 (484)
Q Consensus 460 ~~~~Dgs~iGAAl~Aa~ 476 (484)
.+.++++.+|||++|.-
T Consensus 295 ~LG~dAGaiGAA~iA~~ 311 (326)
T PRK00976 295 VLGKESAAIGLALIARD 311 (326)
T ss_pred ccCCchHHHHHHHHHHH
Confidence 56899999999998853
|
|
| >PRK13318 pantothenate kinase; Reviewed | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.011 Score=58.65 Aligned_cols=122 Identities=17% Similarity=0.139 Sum_probs=65.5
Q ss_pred EEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCceeeeeee
Q 011505 97 YYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGFTF 176 (484)
Q Consensus 97 ~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~lGftF 176 (484)
+|+||+|||++|+++++ ++ ++.. .+.+|+... .+.+++++ .+.++++..+.+. .+...+|+++
T Consensus 2 iL~IDIGnT~iK~al~d-~g---~i~~----~~~~~t~~~-~~~~~~~~----~l~~l~~~~~~~~----~~i~~I~iss 64 (258)
T PRK13318 2 LLAIDVGNTNTVFGLYE-GG---KLVA----HWRISTDSR-RTADEYGV----WLKQLLGLSGLDP----EDITGIIISS 64 (258)
T ss_pred EEEEEECCCcEEEEEEE-CC---EEEE----EEEEeCCCC-CCHHHHHH----HHHHHHHHcCCCc----ccCceEEEEE
Confidence 68999999999999998 44 2443 245666542 23445444 4455555443211 1223344443
Q ss_pred eeeeeeeecCceEEECccHHHHHHHHHHhc-----------CCCceEEEEEec--------hHHHHhcccccCCCcEEEE
Q 011505 177 SFPVMQTSINTGTLVGRDVVEELSRAMAKQ-----------GLDMSVSALVND--------TVGTLAGGRYTNKDVVAAV 237 (484)
Q Consensus 177 SfPv~q~~~~~G~l~G~dv~~~L~~al~r~-----------gl~v~v~alvND--------tvatlla~~y~~~~~~igl 237 (484)
=-|-. ...+...++..+... +++ +.+.|| ..+..+.+.|.. ..+-+
T Consensus 65 Vvp~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~gl~---~~y~np~~lG~DR~a~~~aa~~~~~~--~~ivi 129 (258)
T PRK13318 65 VVPSV----------MHSLERMCRKYFNIEPLVVVGPGVKTGIN---IKVDNPKEVGADRIVNAVAAYELYGG--PLIVV 129 (258)
T ss_pred ecCch----------HHHHHHHHHHHhCCCCeEEECCCcCCCCc---eecCChhhcchHHHHHHHHHHHHcCC--CEEEE
Confidence 11321 011222233222100 122 457787 455555555543 67889
Q ss_pred EEccCcceEEEcc
Q 011505 238 ILGTGSNAAYVER 250 (484)
Q Consensus 238 IlGTG~Na~yie~ 250 (484)
-+||++...++.+
T Consensus 130 d~GTA~t~d~v~~ 142 (258)
T PRK13318 130 DFGTATTFDVVSA 142 (258)
T ss_pred EcCCceEEEEEcC
Confidence 9999999988853
|
|
| >PF00370 FGGY_N: FGGY family of carbohydrate kinases, N-terminal domain; InterPro: IPR018484 It has been shown [] that four different type of carbohydrate kinases seem to be evolutionary related | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0038 Score=61.06 Aligned_cols=61 Identities=18% Similarity=0.329 Sum_probs=43.9
Q ss_pred eEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeecCCC---ccccCcchhHHHHHHHHHHHHhhcc
Q 011505 96 TYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPH---LMTGTSDALFDYIAAELAKFVSQES 159 (484)
Q Consensus 96 ~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~ip~~---~~~~~~~~lfd~Ia~~i~~fl~~~~ 159 (484)
+||+||+|.||+|+++++.+|+ ++...+..++.... ...-+.+++++.+.+++++.+++.+
T Consensus 1 y~lgiDiGTts~K~~l~d~~g~---iv~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~ 64 (245)
T PF00370_consen 1 YYLGIDIGTTSVKAVLFDEDGK---IVASASRPYPYYTPEPGWAEQDPDEIWEAICEALKELLSQAG 64 (245)
T ss_dssp EEEEEEECSSEEEEEEEETTSC---EEEEEEEEETEBCSSTTEEEE-HHHHHHHHHHHHHHHHHHCT
T ss_pred CEEEEEEcccceEEEEEeCCCC---EEEEEEEeeeeccccccccccChHHHHHHHHHHHHHHHhhcC
Confidence 5899999999999999997665 55544433332221 2233688999999999999998763
|
These enzymes include L-fucolokinase (2.7.1.51 from EC) (gene fucK); gluconokinase (2.7.1.12 from EC) (gene gntK); glycerol kinase (2.7.1.30 from EC) (gene glpK); xylulokinase (2.7.1.17 from EC) (gene xylB); and L-xylulose kinase (2.7.1.53 from EC) (gene lyxK). These enzymes are proteins of from 480 to 520 amino acid residues. This entry represents the N-terminal domain of these proteins. It adopts a ribonuclease H-like fold and is structurally related to the C-terminal domain [, ].; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0005975 carbohydrate metabolic process; PDB: 3G25_D 3GE1_D 2NLX_A 2ITM_A 2ZF5_Y 3L0Q_B 3GG4_B 3I8B_A 3H3O_C 3FLC_X .... |
| >TIGR00241 CoA_E_activ CoA-substrate-specific enzyme activase, putative | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.22 Score=49.08 Aligned_cols=94 Identities=13% Similarity=0.173 Sum_probs=54.2
Q ss_pred eEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCceeeeee
Q 011505 96 TYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGFT 175 (484)
Q Consensus 96 ~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~lGft 175 (484)
++++||+|.|+.|+++++ +++ ++...+ .+ .+..++-.++.+.+.+++.+.+. .+...+|+|
T Consensus 1 ~~lGIDiGtts~K~vl~d-~g~---il~~~~----~~-------~~~~~~~~~~~l~~~~~~~~~~~----~~i~~i~~T 61 (248)
T TIGR00241 1 ISLGIDSGSTTTKMVLME-DGK---VIGYKW----LD-------TTPVIEETARAILEALKEAGIGL----EPIDKIVAT 61 (248)
T ss_pred CEEEEEcChhheEEEEEc-CCE---EEEEEE----ec-------CCCCHHHHHHHHHHHHHHcCCCh----hheeEEEEE
Confidence 478999999999999997 553 554321 22 22345666777888776544321 223333332
Q ss_pred eeeeeeeeecCceEEECccHHHHHHHHHHhcCCCceEEEEEechHHHHhcccccCCCcEE
Q 011505 176 FSFPVMQTSINTGTLVGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRYTNKDVVA 235 (484)
Q Consensus 176 FSfPv~q~~~~~G~l~G~dv~~~L~~al~r~gl~v~v~alvNDtvatlla~~y~~~~~~i 235 (484)
.-.. .++. + .+ ..+|..++...+..|..|++..
T Consensus 62 --g~~~------------~~v~-----~--~~------~~~~ei~~~~~g~~~~~~~~~~ 94 (248)
T TIGR00241 62 --GYGR------------HKVG-----F--AD------KIVTEISCHGKGANYLAPEARG 94 (248)
T ss_pred --CCCc------------cccc-----c--cC------CceEEhhHHHHHHHHHCCCCCE
Confidence 2211 1111 0 01 2567888888888887777654
|
This domain may be involved in generating or regenerating the active sites of enzymes related to (R)-2-hydroxyglutaryl-CoA dehydratase and benzoyl-CoA reductase. |
| >TIGR03286 methan_mark_15 putative methanogenesis marker protein 15 | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.53 Score=49.61 Aligned_cols=24 Identities=17% Similarity=0.325 Sum_probs=21.1
Q ss_pred CCCceeeEEEEEeCCceEEEEEEE
Q 011505 90 TGDEKGTYYALDLGGTNFRVLRVH 113 (484)
Q Consensus 90 ~G~E~G~~laiDlGGTnlRv~~V~ 113 (484)
.+..+|.+++||+|+|+.++.+++
T Consensus 139 ~~~~~g~~lGIDiGSTttK~Vl~d 162 (404)
T TIGR03286 139 RERQEGLTLGIDSGSTTTKAVVME 162 (404)
T ss_pred hhccCCEEEEEEcChhheeeEEEc
Confidence 456778999999999999999986
|
Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it. Related proteins include the BadF/BadG/BcrA/BcrD ATPase family (pfam01869), which includes an activator for (R)-2-hydroxyglutaryl-CoA dehydratase. |
| >TIGR01311 glycerol_kin glycerol kinase | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.028 Score=60.93 Aligned_cols=73 Identities=16% Similarity=0.288 Sum_probs=48.5
Q ss_pred eEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeec--CCC-ccccCcchhHHHHHHHHHHHHhhcccccccCCCCceee
Q 011505 96 TYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSI--PPH-LMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQREL 172 (484)
Q Consensus 96 ~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~i--p~~-~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~l 172 (484)
++|+||+|+|++|+++++.+|+ ++...+..++. |.. ...-+.+++++.+.+++++.+++.+.. +.++..|
T Consensus 2 ~~lgiDiGtt~iKa~l~d~~g~---~l~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~----~~~i~aI 74 (493)
T TIGR01311 2 YILAIDQGTTSSRAIVFDKDGN---IVAIHQKEFTQIFPKPGWVEHDPMEIWESVLSCIAEALAKAGIK----PDDIAAI 74 (493)
T ss_pred eEEEEecCCCceEEEEECCCCC---EEEEEeeeccccCCCCCcEeeCHHHHHHHHHHHHHHHHHHcCCC----hhheeEE
Confidence 5899999999999999998775 55443332321 211 112256789999999999999876532 1234555
Q ss_pred eee
Q 011505 173 GFT 175 (484)
Q Consensus 173 Gft 175 (484)
|++
T Consensus 75 gis 77 (493)
T TIGR01311 75 GIT 77 (493)
T ss_pred EEe
Confidence 554
|
This model describes glycerol kinase, a member of the FGGY family of carbohydrate kinases. |
| >TIGR01315 5C_CHO_kinase FGGY-family pentulose kinase | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.033 Score=61.26 Aligned_cols=73 Identities=16% Similarity=0.341 Sum_probs=49.8
Q ss_pred EEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeec--CC-CccccCcchhHHHHHHHHHHHHhhcccccccCCCCceeee
Q 011505 97 YYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSI--PP-HLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELG 173 (484)
Q Consensus 97 ~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~i--p~-~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~lG 173 (484)
+|+||+|+|+.|+++++.+|+ ++...+.+++. |. .....+.+++++-+.+++++.+++.+.. ..++..||
T Consensus 2 ~lgID~GTts~Ka~l~d~~G~---i~~~~~~~~~~~~~~~g~~eqdp~~~~~~~~~~i~~~~~~~~~~----~~~I~~Ig 74 (541)
T TIGR01315 2 YIGVDVGTGSARACIIDSTGD---ILALAAQNIKTWTPSSGLEGQSSVYIWQAICNCVKQVLAESKVD----PNSVKGIG 74 (541)
T ss_pred EEEEEecCcCEEEEEEcCCCC---EEEEEEeeeeeccCCCCcccCCHHHHHHHHHHHHHHHHHHcCCC----hhheEEEE
Confidence 789999999999999998775 55443333332 22 1223467889999999999999875432 12345566
Q ss_pred eee
Q 011505 174 FTF 176 (484)
Q Consensus 174 ftF 176 (484)
++.
T Consensus 75 is~ 77 (541)
T TIGR01315 75 FDA 77 (541)
T ss_pred ecc
Confidence 654
|
This model represents a subfamily of the FGGY family of carbohydrate kinases. This subfamily is closely related to a set of ribulose kinases, and many members are designated ribitol kinase. However, the member from Klebsiella pneumoniae, from a ribitol catabolism operon, accepts D-ribulose and to a lesser extent D-arabinitol and ribitol (PubMed:9639934 and JW Lengeler, personal communication); its annotation in GenBank as ribitol kinase is imprecise and may have affected public annotation of related proteins. |
| >PTZ00186 heat shock 70 kDa precursor protein; Provisional | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.74 Score=51.94 Aligned_cols=82 Identities=11% Similarity=0.151 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCcceEEEEeceeeccchhHHHHHHHHHHHHhcccCCccEEE
Q 011505 380 RKTIVELCNIVATRGARLAAAGILGVLKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVI 459 (484)
Q Consensus 380 ~~~~~~i~~~V~~RaA~l~Aa~iaaii~~~~~~~~~~~~~~~~~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~~~~~v~i 459 (484)
+..+.++|+-+++|.-..+--+|. .-+-. ...-..+|-++||. ..|..++.+++.+. .. .+.-
T Consensus 322 R~efe~l~~~l~~r~~~~v~~~L~----~a~~~----~~dId~VvLVGGss--riP~V~~~l~~~fg----~~---~~~~ 384 (657)
T PTZ00186 322 RSKFEGITQRLIERSIAPCKQCMK----DAGVE----LKEINDVVLVGGMT--RMPKVVEEVKKFFQ----KD---PFRG 384 (657)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH----HcCCC----hhhCCEEEEECCcc--cChHHHHHHHHHhC----CC---cccc
Confidence 666778888888888777655542 22211 00112567777776 67888877777653 21 1222
Q ss_pred EEcCChhHHHHHHHHHHhc
Q 011505 460 EHSNDGSGIGAALLAASHS 478 (484)
Q Consensus 460 ~~~~Dgs~iGAAl~Aa~~~ 478 (484)
...+..-.+|||+.|++.+
T Consensus 385 ~nPdeaVA~GAAi~a~~l~ 403 (657)
T PTZ00186 385 VNPDEAVALGAATLGGVLR 403 (657)
T ss_pred CCCchHHHHhHHHHHHHhc
Confidence 2345677899999998655
|
|
| >PRK00047 glpK glycerol kinase; Provisional | Back alignment and domain information |
|---|
Probab=95.36 E-value=0.043 Score=59.62 Aligned_cols=73 Identities=16% Similarity=0.257 Sum_probs=49.0
Q ss_pred eEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeee--cCCC-ccccCcchhHHHHHHHHHHHHhhcccccccCCCCceee
Q 011505 96 TYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVS--IPPH-LMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQREL 172 (484)
Q Consensus 96 ~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~--ip~~-~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~l 172 (484)
++|+||+|+|++|+++++.+|+ ++...+.+++ .|.. ....+.+++++-+.+++++.+++.+... .+...|
T Consensus 6 ~~lgiD~GTts~Ka~l~d~~g~---~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~----~~I~~I 78 (498)
T PRK00047 6 YILALDQGTTSSRAIIFDHDGN---IVSVAQKEFTQIFPQPGWVEHDPNEIWASQLSVIAEALAKAGISP----DQIAAI 78 (498)
T ss_pred EEEEEecCCCceEEEEECCCCC---EEEEEeeeccccCCCCCeEeeCHHHHHHHHHHHHHHHHHHcCCCh----hHeeEE
Confidence 6899999999999999998775 4444333333 2221 1123578899999999999987654321 234555
Q ss_pred eee
Q 011505 173 GFT 175 (484)
Q Consensus 173 Gft 175 (484)
|++
T Consensus 79 gis 81 (498)
T PRK00047 79 GIT 81 (498)
T ss_pred EEe
Confidence 554
|
|
| >PRK10939 autoinducer-2 (AI-2) kinase; Provisional | Back alignment and domain information |
|---|
Probab=95.33 E-value=0.047 Score=59.66 Aligned_cols=61 Identities=20% Similarity=0.183 Sum_probs=44.3
Q ss_pred eEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeecC-----CCccccCcchhHHHHHHHHHHHHhhcc
Q 011505 96 TYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIP-----PHLMTGTSDALFDYIAAELAKFVSQES 159 (484)
Q Consensus 96 ~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~ip-----~~~~~~~~~~lfd~Ia~~i~~fl~~~~ 159 (484)
++|+||+|.|+.|+++++.+|+ ++...+.+++.+ +....-+.+++++.+.+++++.+++.+
T Consensus 4 ~~lgID~GTts~Ka~l~d~~G~---~l~~~~~~~~~~~~~~~~g~~Eqd~~~~w~~~~~~l~~~~~~~~ 69 (520)
T PRK10939 4 YLMALDAGTGSIRAVIFDLNGN---QIAVGQAEWRHLAVPDVPGSMEFDLEKNWQLACQCIRQALQKAG 69 (520)
T ss_pred EEEEEecCCCceEEEEECCCCC---EEEEEeccccccCCCCCCCCeeECHHHHHHHHHHHHHHHHHHcC
Confidence 6899999999999999998775 554443334322 122233578899999999999987654
|
|
| >PRK13317 pantothenate kinase; Provisional | Back alignment and domain information |
|---|
Probab=95.23 E-value=3.9 Score=41.19 Aligned_cols=49 Identities=20% Similarity=0.215 Sum_probs=30.5
Q ss_pred eEEEEeceeeccchhHHHHHHHHHHHHhcccCCccEE-EEEcCChhHHHHHHHHH
Q 011505 422 TVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIV-IEHSNDGSGIGAALLAA 475 (484)
Q Consensus 422 ~~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~~~~~v~-i~~~~Dgs~iGAAl~Aa 475 (484)
..|.+.||...++|.+++.+.++++. .. .++. .....-.+.+|||+.+.
T Consensus 224 ~~Ivf~G~gla~n~~l~~~l~~~l~~--~~---~~~~~p~~~~~~gAlGAaL~a~ 273 (277)
T PRK13317 224 ENIVYIGSTLTNNPLLQEIIESYTKL--RN---CTPIFLENGGYSGAIGALLLAT 273 (277)
T ss_pred CeEEEECcccccCHHHHHHHHHHHhc--CC---ceEEecCCCchhHHHHHHHHhh
Confidence 36888887667899998888876541 11 1222 22344556677777653
|
|
| >PRK13321 pantothenate kinase; Reviewed | Back alignment and domain information |
|---|
Probab=95.23 E-value=0.2 Score=49.70 Aligned_cols=47 Identities=23% Similarity=0.328 Sum_probs=31.0
Q ss_pred EEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeecCCCccccCcchhHHHHHHHHH
Q 011505 97 YYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELA 152 (484)
Q Consensus 97 ~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~ 152 (484)
+|+||+|||++|+++++ ++ ++.. .+.+|+... .+.+++++.+.+.+.
T Consensus 2 iL~IDIGnT~ik~gl~~-~~---~i~~----~~~~~T~~~-~~~~~~~~~l~~l~~ 48 (256)
T PRK13321 2 LLLIDVGNTNIKLGVFD-GD---RLLR----SFRLPTDKS-RTSDELGILLLSLFR 48 (256)
T ss_pred EEEEEECCCeEEEEEEE-CC---EEEE----EEEEecCCC-CCHHHHHHHHHHHHH
Confidence 68999999999999998 33 2442 256676543 244566655555443
|
|
| >TIGR01234 L-ribulokinase L-ribulokinase | Back alignment and domain information |
|---|
Probab=95.20 E-value=0.05 Score=59.69 Aligned_cols=61 Identities=15% Similarity=0.167 Sum_probs=45.8
Q ss_pred eEEEEEeCCceEEEEEEE-eCCCcceeEEeeeeeeec-------C-------CCccccCcchhHHHHHHHHHHHHhhcc
Q 011505 96 TYYALDLGGTNFRVLRVH-LGGKGVGLINQEFAEVSI-------P-------PHLMTGTSDALFDYIAAELAKFVSQES 159 (484)
Q Consensus 96 ~~laiDlGGTnlRv~~V~-l~g~~~~i~~~~~~~~~i-------p-------~~~~~~~~~~lfd~Ia~~i~~fl~~~~ 159 (484)
++|+||+|.|+.|+++++ .+|+ ++...+.++++ | .....-+++++++-+.+++++.+++.+
T Consensus 2 ~~lgiD~GTss~Ka~l~d~~~G~---~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~Eqdp~~~w~~~~~~~~~~~~~~~ 77 (536)
T TIGR01234 2 YAIGVDFGTLSGRALAVDVATGE---EIATAVEWYRHWVKGQFLPKTGAKLPNDQALQHPADYIEVLEAAIPTVLAELG 77 (536)
T ss_pred eEEEEecCCCceEEEEEECCCCc---EeeeeeeccccccccccCCCccccCCCCccccCHHHHHHHHHHHHHHHHHHcC
Confidence 589999999999999999 7885 55444444542 3 233344688999999999999988754
|
This enzyme catalyzes the second step in arabinose catabolism. The most closely related protein subfamily outside the scope of this model includes ribitol kinase from E. coli. |
| >PRK13410 molecular chaperone DnaK; Provisional | Back alignment and domain information |
|---|
Probab=95.18 E-value=1.1 Score=50.58 Aligned_cols=82 Identities=18% Similarity=0.257 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCcceEEEEeceeeccchhHHHHHHHHHHHHhcccCCccEEE
Q 011505 380 RKTIVELCNIVATRGARLAAAGILGVLKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVI 459 (484)
Q Consensus 380 ~~~~~~i~~~V~~RaA~l~Aa~iaaii~~~~~~~~~~~~~~~~~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~~~~~v~i 459 (484)
+..+.++|.-+++|...++-.+|. .-+-. ...-..+|.++||. ..|..++.+++.+ +... ...+
T Consensus 297 R~~FE~l~~~l~~r~~~~i~~~L~----~ag~~----~~dId~VvLVGGss--RiP~V~~~l~~~f----g~~~--~~~~ 360 (668)
T PRK13410 297 RKQFESLCGDLLDRLLRPVKRALK----DAGLS----PEDIDEVVLVGGST--RMPMVQQLVRTLI----PREP--NQNV 360 (668)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH----HcCCC----hhhCcEEEEECCcc--ccHHHHHHHHHHc----CCCc--ccCC
Confidence 666778888888887766655442 22210 00012566777765 5788777777654 3211 1111
Q ss_pred EEcCChhHHHHHHHHHHhc
Q 011505 460 EHSNDGSGIGAALLAASHS 478 (484)
Q Consensus 460 ~~~~Dgs~iGAAl~Aa~~~ 478 (484)
-.+.+-.+|||+.|+..+
T Consensus 361 -npdeaVA~GAAi~aa~ls 378 (668)
T PRK13410 361 -NPDEVVAVGAAIQAGILA 378 (668)
T ss_pred -CCchHHHHhHHHHHHhhc
Confidence 245678899999998755
|
|
| >PTZ00009 heat shock 70 kDa protein; Provisional | Back alignment and domain information |
|---|
Probab=95.17 E-value=0.54 Score=52.97 Aligned_cols=84 Identities=18% Similarity=0.219 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCcceEEEEeceeeccchhHHHHHHHHHHHHhcccCCccEEE
Q 011505 380 RKTIVELCNIVATRGARLAAAGILGVLKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVI 459 (484)
Q Consensus 380 ~~~~~~i~~~V~~RaA~l~Aa~iaaii~~~~~~~~~~~~~~~~~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~~~~~v~i 459 (484)
+..+.++|+-+++|....+-..| ...+... ..-..++.++||. ..|..++.+++.+.. ... ..-
T Consensus 301 R~~fe~l~~~l~~~~~~~i~~~L----~~a~~~~----~~i~~ViLvGGss--riP~v~~~i~~~f~~---~~~---~~~ 364 (653)
T PTZ00009 301 RARFEELCGDYFRNTLQPVEKVL----KDAGMDK----RSVHEVVLVGGST--RIPKVQSLIKDFFNG---KEP---CKS 364 (653)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH----HHcCCCH----HHCcEEEEECCCC--CChhHHHHHHHHhCC---CCC---CCC
Confidence 56667788888888776654443 3222210 0012456666654 688888887766531 110 111
Q ss_pred EEcCChhHHHHHHHHHHhcc
Q 011505 460 EHSNDGSGIGAALLAASHSK 479 (484)
Q Consensus 460 ~~~~Dgs~iGAAl~Aa~~~~ 479 (484)
.-.+.+-..|||+.|+..+.
T Consensus 365 ~npdeaVA~GAa~~aa~ls~ 384 (653)
T PTZ00009 365 INPDEAVAYGAAVQAAILTG 384 (653)
T ss_pred CCcchHHhhhhhhhHHHhcC
Confidence 12466778899999987653
|
|
| >PRK15027 xylulokinase; Provisional | Back alignment and domain information |
|---|
Probab=95.14 E-value=0.062 Score=58.15 Aligned_cols=71 Identities=17% Similarity=0.379 Sum_probs=49.7
Q ss_pred eEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeec--C-CCccccCcchhHHHHHHHHHHHHhhcccccccCCCCceee
Q 011505 96 TYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSI--P-PHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQREL 172 (484)
Q Consensus 96 ~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~i--p-~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~l 172 (484)
+||+||+|.|++|+++++..|+ ++...+..+++ | .....-+.+++++.+.+++++.+++... +++..|
T Consensus 1 ~~lgID~GTts~Ka~l~d~~G~---vva~~~~~~~~~~~~~g~~eqd~~~~w~~~~~~~~~l~~~~~~------~~I~aI 71 (484)
T PRK15027 1 MYIGIDLGTSGVKVILLNEQGE---VVASQTEKLTVSRPHPLWSEQDPEQWWQATDRAMKALGDQHSL------QDVKAL 71 (484)
T ss_pred CEEEEEecccceEEEEEcCCCC---EEEEEeecccccCCCCCccccCHHHHHHHHHHHHHHHHHhCCc------cceeEE
Confidence 4899999999999999998775 66555444543 2 1222345778999999999999876421 235556
Q ss_pred eee
Q 011505 173 GFT 175 (484)
Q Consensus 173 Gft 175 (484)
|++
T Consensus 72 ~is 74 (484)
T PRK15027 72 GIA 74 (484)
T ss_pred EEe
Confidence 664
|
|
| >PRK10331 L-fuculokinase; Provisional | Back alignment and domain information |
|---|
Probab=94.72 E-value=0.094 Score=56.54 Aligned_cols=60 Identities=23% Similarity=0.273 Sum_probs=42.8
Q ss_pred eEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeee--c--C-CCccccCcchhHHHHHHHHHHHHhhc
Q 011505 96 TYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVS--I--P-PHLMTGTSDALFDYIAAELAKFVSQE 158 (484)
Q Consensus 96 ~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~--i--p-~~~~~~~~~~lfd~Ia~~i~~fl~~~ 158 (484)
++|+||+|.|+.|+++++.+|+ ++...+..++ + | .....-+.+++++.+.+++++.+++.
T Consensus 3 ~~lgID~GTt~~Ka~l~d~~G~---~~~~~~~~~~~~~~~~~~g~~eqd~~~~w~~~~~~~~~~~~~~ 67 (470)
T PRK10331 3 VILVLDCGATNVRAIAVDRQGK---IVARASTPNASDIAAENSDWHQWSLDAILQRFADCCRQINSEL 67 (470)
T ss_pred eEEEEecCCCceEEEEEcCCCc---EEEEEecccccccCCCCCCCcccCHHHHHHHHHHHHHHHHHhC
Confidence 6899999999999999998875 5544433332 1 1 11223357789999999999998753
|
|
| >COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=94.37 E-value=3.9 Score=42.62 Aligned_cols=101 Identities=21% Similarity=0.306 Sum_probs=60.0
Q ss_pred CCceeeEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCce
Q 011505 91 GDEKGTYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQR 170 (484)
Q Consensus 91 G~E~G~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~ 170 (484)
....+.+|+||.|-|+.++.+++-++. +... |-.++. +.+. -.+.+.+.+++-+... .+..
T Consensus 131 ~~~~~~~LGID~GSTtTK~VLm~d~~~---I~~~----~~~~t~-----g~p~---~~~~l~~~le~l~~~~----~~I~ 191 (396)
T COG1924 131 EYQGMYTLGIDSGSTTTKAVLMEDGKE---ILYG----FYVSTK-----GRPI---AEKALKEALEELGEKL----EEIL 191 (396)
T ss_pred hhcCcEEEEEecCCcceeEEEEeCCCe---EEEE----EEEcCC-----CChh---HHHHHHHHHHHcccCh----heee
Confidence 344568999999999999999876552 4432 333332 1222 2455555555443221 2234
Q ss_pred eeeeeeeeeeeeeecCceEEECccHHHHHHHHHHhcCCCceEEEEEechHHHHhcccccCCCcE
Q 011505 171 ELGFTFSFPVMQTSINTGTLVGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRYTNKDVV 234 (484)
Q Consensus 171 ~lGftFSfPv~q~~~~~G~l~G~dv~~~L~~al~r~gl~v~v~alvNDtvatlla~~y~~~~~~ 234 (484)
.+|+| | -|+ .++..+| +.+ ..+|-+++...+..|..|+..
T Consensus 192 ~~~~T------------G--YGR---~~v~~~~---~aD----~~~~Ei~ah~kgA~~f~p~~d 231 (396)
T COG1924 192 GLGVT------------G--YGR---NLVGAAL---GAD----KVVVEISAHAKGARYFAPDVD 231 (396)
T ss_pred eeeee------------c--ccH---HHhhhhh---cCC----cceeeeehhHHHHHHhCCCCc
Confidence 44443 1 234 3345555 555 578899999999999877665
|
|
| >PF00012 HSP70: Hsp70 protein; InterPro: IPR013126 Heat shock proteins, Hsp70 chaperones help to fold many proteins | Back alignment and domain information |
|---|
Probab=94.28 E-value=0.35 Score=53.50 Aligned_cols=82 Identities=22% Similarity=0.303 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCcceEEEEeceeeccchhHHHHHHHHHHHHhcccCCccEEE
Q 011505 380 RKTIVELCNIVATRGARLAAAGILGVLKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVI 459 (484)
Q Consensus 380 ~~~~~~i~~~V~~RaA~l~Aa~iaaii~~~~~~~~~~~~~~~~~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~~~~~v~i 459 (484)
+..+..+|.-+++|...++-..| +..+... ..-..++.++|+ ...|.+++.+++.+. . .+..
T Consensus 297 r~~fe~l~~~~~~~~~~~i~~~l----~~~~~~~----~~i~~V~lvGG~--sr~p~v~~~l~~~f~----~----~~~~ 358 (602)
T PF00012_consen 297 REEFEELCEPLLERIIEPIEKAL----KDAGLKK----EDIDSVLLVGGS--SRIPYVQEALKELFG----K----KISK 358 (602)
T ss_dssp HHHHHHHTHHHHHHTHHHHHHHH----HHTT--G----GGESEEEEESGG--GGSHHHHHHHHHHTT----S----EEB-
T ss_pred cceeccccccccccccccccccc----ccccccc----cccceeEEecCc--ccchhhhhhhhhccc----c----cccc
Confidence 55566777788888777665444 3222110 001134555554 478888777776543 1 1111
Q ss_pred -EEcCChhHHHHHHHHHHhcc
Q 011505 460 -EHSNDGSGIGAALLAASHSK 479 (484)
Q Consensus 460 -~~~~Dgs~iGAAl~Aa~~~~ 479 (484)
.-.+.+-..|||+.|++.+.
T Consensus 359 ~~~p~~aVA~GAa~~a~~~~~ 379 (602)
T PF00012_consen 359 SVNPDEAVARGAALYAAILSG 379 (602)
T ss_dssp SS-TTTHHHHHHHHHHHHHHT
T ss_pred ccccccccccccccchhhhcc
Confidence 12467778999999987664
|
Hsp70 assisted folding involves repeated cycles of substrate binding and release. Hsp70 activity is ATP dependent. Hsp70 proteins are made up of two regions: the amino terminus is the ATPase domain and the carboxyl terminus is the substrate binding region []. Hsp70 proteins have an average molecular weight of 70 kDa [, , ]. In most species,there are many proteins that belong to the hsp70 family. Some of these are only expressed under stress conditions (strictly inducible), while some are present in cells under normal growth conditions and are not heat-inducible (constitutive or cognate) [, ]. Hsp70 proteins can be found in different cellular compartments(nuclear, cytosolic, mitochondrial, endoplasmic reticulum, for example).; PDB: 2P32_D 3D2F_A 2QXL_A 3D2E_C 3C7N_A 3FE1_C 4ANI_C 2V7Y_A 2KHO_A 3DPQ_B .... |
| >PTZ00294 glycerol kinase-like protein; Provisional | Back alignment and domain information |
|---|
Probab=94.20 E-value=0.13 Score=55.91 Aligned_cols=61 Identities=11% Similarity=0.200 Sum_probs=43.8
Q ss_pred eEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeec--C-CCccccCcchhHHHHHHHHHHHHhhcc
Q 011505 96 TYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSI--P-PHLMTGTSDALFDYIAAELAKFVSQES 159 (484)
Q Consensus 96 ~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~i--p-~~~~~~~~~~lfd~Ia~~i~~fl~~~~ 159 (484)
.+|+||+|.|++|+++++.+|+ ++...+..++. | +....-+.+++++-+.+++.+.+++..
T Consensus 3 ~~lgiDiGTts~Ka~l~d~~G~---~v~~~~~~~~~~~~~~g~~eqd~~~~~~~~~~~l~~~~~~~~ 66 (504)
T PTZ00294 3 YIGSIDQGTTSTRFIIFDEKGN---VVSSHQIPHEQITPHPGWLEHDPEEILRNVYKCMNEAIKKLR 66 (504)
T ss_pred EEEEEecCCCceEEEEECCCCC---EEEEEEEeecccCCCCCeEeeCHHHHHHHHHHHHHHHHHHcC
Confidence 6899999999999999998775 55444433331 1 112233577899999999999987654
|
|
| >TIGR02628 fuculo_kin_coli L-fuculokinase | Back alignment and domain information |
|---|
Probab=94.05 E-value=0.14 Score=55.05 Aligned_cols=59 Identities=19% Similarity=0.267 Sum_probs=42.3
Q ss_pred eEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeec----C-CCccccCcchhHHHHHHHHHHHHhh
Q 011505 96 TYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSI----P-PHLMTGTSDALFDYIAAELAKFVSQ 157 (484)
Q Consensus 96 ~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~i----p-~~~~~~~~~~lfd~Ia~~i~~fl~~ 157 (484)
.+|+||+|.|+.|+++++.+|+ ++.+.+.+++. | +....-+.+++++.+.+++++.+.+
T Consensus 2 ~ilgiD~GTss~K~~l~d~~g~---~va~~~~~~~~~~~~~~~g~~eqd~~~~w~~~~~~~~~l~~~ 65 (465)
T TIGR02628 2 VILVLDCGATNLRAIAINRQGK---IVASASTPNATKQAIENNDYHIWDLEAIWQKLADCCQQINSE 65 (465)
T ss_pred eEEEEecCCCcEEEEEEcCCCC---EEEEEecccccCCCCCCCCceeeCHHHHHHHHHHHHHHHHhh
Confidence 4799999999999999998775 55444333321 1 1122335778999999999999864
|
Members of this family are L-fuculokinase, from the clade that includes the L-fuculokinase of Escherichia coli. This enzyme catalyzes the second step in fucose catabolism. This family belongs to FGGY family of carbohydrate kinases (pfam02782, pfam00370). It is encoded by the kinase (K) gene of the fucose (fuc) operon. |
| >PRK04123 ribulokinase; Provisional | Back alignment and domain information |
|---|
Probab=93.97 E-value=0.17 Score=55.72 Aligned_cols=61 Identities=16% Similarity=0.230 Sum_probs=42.6
Q ss_pred eEEEEEeCCceEEEEEEEe-CCCcceeEEeeeeeeec--------CC-CccccCcchhHHHHHHHHHHHHhhcc
Q 011505 96 TYYALDLGGTNFRVLRVHL-GGKGVGLINQEFAEVSI--------PP-HLMTGTSDALFDYIAAELAKFVSQES 159 (484)
Q Consensus 96 ~~laiDlGGTnlRv~~V~l-~g~~~~i~~~~~~~~~i--------p~-~~~~~~~~~lfd~Ia~~i~~fl~~~~ 159 (484)
++|+||+|.|+.|+.+++. +|+ ++.+.+.+++. |. ....-+++++++-+.+++++.+++.+
T Consensus 4 ~~lgiD~GTts~Ka~l~d~~~g~---~~~~~~~~~~~~~~~~~~~~~~g~~Eqdp~~~w~~~~~~i~~~~~~~~ 74 (548)
T PRK04123 4 YVIGLDFGTDSVRALLVDCATGE---ELATAVVEYPHWVKGRYLDLPPNQALQHPLDYIESLEAAIPAVLKEAG 74 (548)
T ss_pred EEEEEecCCCceEEEEEECCCCc---EeEEEEeeccccccccccCCCCCceeeCHHHHHHHHHHHHHHHHHHcC
Confidence 6899999999999999995 775 45444333431 11 11123467789999999999887654
|
|
| >PLN03184 chloroplast Hsp70; Provisional | Back alignment and domain information |
|---|
Probab=93.92 E-value=3.3 Score=46.92 Aligned_cols=82 Identities=17% Similarity=0.267 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCcceEEEEeceeeccchhHHHHHHHHHHHHhcccCCccEEE
Q 011505 380 RKTIVELCNIVATRGARLAAAGILGVLKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVI 459 (484)
Q Consensus 380 ~~~~~~i~~~V~~RaA~l~Aa~iaaii~~~~~~~~~~~~~~~~~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~~~~~v~i 459 (484)
+..+.++|.-+++|....+-.+| ...+... ..-..++-++||. .-|..++.+++.+ +... ...
T Consensus 334 R~~fe~l~~~l~~r~~~~i~~~L----~~a~~~~----~dId~ViLvGGss--riP~V~~~i~~~f----g~~~--~~~- 396 (673)
T PLN03184 334 RAKFEELCSDLLDRCKTPVENAL----RDAKLSF----KDIDEVILVGGST--RIPAVQELVKKLT----GKDP--NVT- 396 (673)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH----HHcCCCh----hHccEEEEECCcc--ccHHHHHHHHHHh----CCCc--ccc-
Confidence 56677888888888766555443 2222210 0012566777766 5788887777765 3211 111
Q ss_pred EEcCChhHHHHHHHHHHhc
Q 011505 460 EHSNDGSGIGAALLAASHS 478 (484)
Q Consensus 460 ~~~~Dgs~iGAAl~Aa~~~ 478 (484)
...+.+-..|||+.|++.+
T Consensus 397 ~npdeaVA~GAAi~aa~ls 415 (673)
T PLN03184 397 VNPDEVVALGAAVQAGVLA 415 (673)
T ss_pred cCcchHHHHHHHHHHHHhc
Confidence 2346777899999998755
|
|
| >PLN02295 glycerol kinase | Back alignment and domain information |
|---|
Probab=93.54 E-value=0.18 Score=54.95 Aligned_cols=62 Identities=15% Similarity=0.184 Sum_probs=44.9
Q ss_pred eEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeec--CC-CccccCcchhHHHHHHHHHHHHhhccc
Q 011505 96 TYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSI--PP-HLMTGTSDALFDYIAAELAKFVSQESE 160 (484)
Q Consensus 96 ~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~i--p~-~~~~~~~~~lfd~Ia~~i~~fl~~~~~ 160 (484)
.+|+||+|.|++|+++++.+|+ ++...+.++++ |+ ....-+++++++-+.++|++.+++.+.
T Consensus 1 ~vlgID~GTts~Ka~l~d~~G~---~~~~~~~~~~~~~~~~G~~Eqdp~~~w~~~~~~i~~~~~~~~~ 65 (512)
T PLN02295 1 FVGAIDQGTTSTRFIIYDRDAR---PVASHQVEFTQIYPQAGWVEHDPMEILESVLTCIAKALEKAAA 65 (512)
T ss_pred CEEEEecCCCceEEEEECCCCC---EEEEEeecccccCCCCCcEeeCHHHHHHHHHHHHHHHHHHcCC
Confidence 4799999999999999998775 55443333332 21 222346788999999999999987653
|
|
| >TIGR02350 prok_dnaK chaperone protein DnaK | Back alignment and domain information |
|---|
Probab=92.93 E-value=2.9 Score=46.51 Aligned_cols=82 Identities=20% Similarity=0.236 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCcceEEEEeceeeccchhHHHHHHHHHHHHhcccCCccEEE
Q 011505 380 RKTIVELCNIVATRGARLAAAGILGVLKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVI 459 (484)
Q Consensus 380 ~~~~~~i~~~V~~RaA~l~Aa~iaaii~~~~~~~~~~~~~~~~~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~~~~~v~i 459 (484)
+..+.++|+-+++|...++--.| ...+... ..-..++-++||. .-|..++.+++.+. ... ...
T Consensus 293 r~~fe~l~~~l~~~~~~~i~~~l----~~a~~~~----~~i~~V~LvGGss--riP~v~~~i~~~f~----~~~--~~~- 355 (595)
T TIGR02350 293 RAKFEELTADLVERTKEPVRQAL----KDAGLSA----SDIDEVILVGGST--RIPAVQELVKDFFG----KEP--NKS- 355 (595)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH----HHcCCCH----hHCcEEEEECCcc--cChHHHHHHHHHhC----Ccc--cCC-
Confidence 66667788888888776665444 2222110 0012456666655 58888888777653 211 111
Q ss_pred EEcCChhHHHHHHHHHHhc
Q 011505 460 EHSNDGSGIGAALLAASHS 478 (484)
Q Consensus 460 ~~~~Dgs~iGAAl~Aa~~~ 478 (484)
...+.+-..|||+.|++.+
T Consensus 356 ~~pdeava~GAa~~aa~l~ 374 (595)
T TIGR02350 356 VNPDEVVAIGAAIQGGVLK 374 (595)
T ss_pred cCcHHHHHHHHHHHHHHhc
Confidence 1245677889999998754
|
Members of this family are the chaperone DnaK, of the DnaK-DnaJ-GrpE chaperone system. All members of the seed alignment were taken from completely sequenced bacterial or archaeal genomes and (except for Mycoplasma sequence) found clustered with other genes of this systems. This model excludes DnaK homologs that are not DnaK itself, such as the heat shock cognate protein HscA (TIGR01991). However, it is not designed to distinguish among DnaK paralogs in eukaryotes. Note that a number of dnaK genes have shadow ORFs in the same reverse (relative to dnaK) reading frame, a few of which have been assigned glutamate dehydrogenase activity. The significance of this observation is unclear; lengths of such shadow ORFs are highly variable as if the presumptive protein product is not conserved. |
| >TIGR01991 HscA Fe-S protein assembly chaperone HscA | Back alignment and domain information |
|---|
Probab=92.26 E-value=5.2 Score=44.70 Aligned_cols=82 Identities=13% Similarity=0.197 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCcceEEEEeceeeccchhHHHHHHHHHHHHhcccCCccEEE
Q 011505 380 RKTIVELCNIVATRGARLAAAGILGVLKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVI 459 (484)
Q Consensus 380 ~~~~~~i~~~V~~RaA~l~Aa~iaaii~~~~~~~~~~~~~~~~~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~~~~~v~i 459 (484)
+..+.++|+-+++|...++--.| +..+... ..-..++-++||. .-|..++.+++.+. ... ...
T Consensus 281 r~efe~l~~~ll~~i~~~i~~~L----~~a~~~~----~~id~ViLvGGss--riP~V~~~l~~~f~----~~~--~~~- 343 (599)
T TIGR01991 281 RDEFEALIQPLVQKTLSICRRAL----RDAGLSV----EEIKGVVLVGGST--RMPLVRRAVAELFG----QEP--LTD- 343 (599)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH----HHcCCCh----hhCCEEEEECCcC--CChHHHHHHHHHhC----CCC--CCC-
Confidence 56667888888888776665443 3222210 0112456666665 67888887777653 211 111
Q ss_pred EEcCChhHHHHHHHHHHhc
Q 011505 460 EHSNDGSGIGAALLAASHS 478 (484)
Q Consensus 460 ~~~~Dgs~iGAAl~Aa~~~ 478 (484)
...+.+-..|||+.|+..+
T Consensus 344 ~npdeaVA~GAai~a~~l~ 362 (599)
T TIGR01991 344 IDPDQVVALGAAIQADLLA 362 (599)
T ss_pred CCCcHHHHHHHHHHHHHhc
Confidence 2346778899999998755
|
The Heat Shock Cognate proteins HscA and HscB act together as chaperones. HscA resembles DnaK but belongs in a separate clade. The apparent function is to aid assembly of iron-sulfur cluster proteins. Homologs from Buchnera and Wolbachia are clearly in the same clade but are highly derived and score lower than some examples of DnaK. |
| >PF02782 FGGY_C: FGGY family of carbohydrate kinases, C-terminal domain; InterPro: IPR018485 It has been shown [] that four different type of carbohydrate kinases seem to be evolutionary related | Back alignment and domain information |
|---|
Probab=91.70 E-value=1.3 Score=41.39 Aligned_cols=76 Identities=24% Similarity=0.214 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCcceEEEEeceeeccchhHHHHHHHHHHHHhcccCCccEEEEEcCC
Q 011505 385 ELCNIVATRGARLAAAGILGVLKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVIEHSND 464 (484)
Q Consensus 385 ~i~~~V~~RaA~l~Aa~iaaii~~~~~~~~~~~~~~~~~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~~~~~v~i~~~~D 464 (484)
+++++|++=-|.-....+-.+-+..+. +...|.+.||.. +.|.+.+.+-..+. ..|.+...++
T Consensus 122 ~~~rAv~Egia~~~~~~~~~l~~~~~~--------~~~~i~~~GG~~-~n~~~~q~~Advl~--------~~V~~~~~~e 184 (198)
T PF02782_consen 122 DLARAVLEGIAFSLRQILEELEELTGI--------PIRRIRVSGGGA-KNPLWMQILADVLG--------RPVVRPEVEE 184 (198)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTS--------CESEEEEESGGG-GSHHHHHHHHHHHT--------SEEEEESSST
T ss_pred HHHHHHHHhHHHHHHHhhhhccccccc--------cceeeEeccccc-cChHHHHHHHHHhC--------CceEeCCCCc
Confidence 455566664454554444444443344 225677777777 88988888776553 3566666789
Q ss_pred hhHHHHHHHHHHh
Q 011505 465 GSGIGAALLAASH 477 (484)
Q Consensus 465 gs~iGAAl~Aa~~ 477 (484)
++.+|||++|+++
T Consensus 185 ~~a~GaA~~A~~a 197 (198)
T PF02782_consen 185 ASALGAALLAAVA 197 (198)
T ss_dssp HHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHhh
Confidence 9999999999875
|
These enzymes include L-fucolokinase (2.7.1.51 from EC) (gene fucK); gluconokinase (2.7.1.12 from EC) (gene gntK); glycerol kinase (2.7.1.30 from EC) (gene glpK); xylulokinase (2.7.1.17 from EC) (gene xylB); and L-xylulose kinase (2.7.1.53 from EC) (gene lyxK). These enzymes are proteins of from 480 to 520 amino acid residues. This entry represents the C-terminal domain of these proteins. It adopts a ribonuclease H-like fold and is structurally related to the N-terminal domain [, ].; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0005975 carbohydrate metabolic process; PDB: 4E1J_B 2W40_C 2W41_A 2UYT_A 2CGK_B 2CGL_A 2CGJ_A 3GBT_A 3LL3_B 3HZ6_A .... |
| >PF07318 DUF1464: Protein of unknown function (DUF1464); InterPro: IPR009927 This family consists of several hypothetical archaeal proteins of around 350 residues in length | Back alignment and domain information |
|---|
Probab=90.76 E-value=21 Score=37.05 Aligned_cols=49 Identities=27% Similarity=0.430 Sum_probs=34.1
Q ss_pred eEEEEeceeeccchhHHHHHHHHHHHHhcccCCccEEEE----EcCChhHHHHHHHHH
Q 011505 422 TVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVIE----HSNDGSGIGAALLAA 475 (484)
Q Consensus 422 ~~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~~~~~v~i~----~~~Dgs~iGAAl~Aa 475 (484)
..|.+.|.+. ..|.|.+.+++.+.++.+-. ...+. .+++ +..|||++|-
T Consensus 262 ~~IilSGr~~-~~~~~~~~l~~~l~~~~~~~---v~~l~~~~~~aKe-aA~GaAiIA~ 314 (343)
T PF07318_consen 262 DEIILSGRFS-RIPEFRKKLEDRLEDYFPVK---VRKLEGLARKAKE-AAQGAAIIAN 314 (343)
T ss_pred CEEEEecccc-ccHHHHHHHHHHHHhhcccc---eeecccccccchh-hhhhHHHHhh
Confidence 4588999986 78889999999998876521 11111 1354 6779999984
|
The function of this family is unknown. |
| >TIGR01175 pilM type IV pilus assembly protein PilM | Back alignment and domain information |
|---|
Probab=90.43 E-value=7.7 Score=39.76 Aligned_cols=62 Identities=19% Similarity=0.342 Sum_probs=40.4
Q ss_pred eEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcc
Q 011505 96 TYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQES 159 (484)
Q Consensus 96 ~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~ 159 (484)
.++|||+|.+++|+..++..++..++.. ....+.|.+......-.=.+-+++.|.+.+++.+
T Consensus 4 ~~vgiDIg~~~Ik~v~~~~~~~~~~v~~--~~~~~~p~~~i~~g~i~d~~~~~~~l~~~~~~~~ 65 (348)
T TIGR01175 4 LLVGIDIGSTSVKVAQLKRSGDRYKLEH--YAVEPLPAGIFTEGHIVEYQAVAEALKELLSELG 65 (348)
T ss_pred cEEEEEeccCeEEEEEEEecCCceEEEE--EEEEECCCCcccCCCccCHHHHHHHHHHHHHHcC
Confidence 6899999999999998886555444553 3346777665432211123556777777776654
|
This protein is required for the assembly of the type IV fimbria in Pseudomonas aeruginosa responsible for twitching motility, and for a similar pilus-like structure in Synechocystis. It is also found in species such as Deinococcus described as having natural transformation (for which a type IV pilus-like structure is proposed) but not fimbria. |
| >TIGR01174 ftsA cell division protein FtsA | Back alignment and domain information |
|---|
Probab=89.78 E-value=14 Score=38.50 Aligned_cols=57 Identities=14% Similarity=0.226 Sum_probs=37.9
Q ss_pred ECccHHHHHHHHHHhcCCCceEEEEEechHHHHhccccc--CCCcEEEEEEccCc-ceEEEc
Q 011505 191 VGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRYT--NKDVVAAVILGTGS-NAAYVE 249 (484)
Q Consensus 191 ~G~dv~~~L~~al~r~gl~v~v~alvNDtvatlla~~y~--~~~~~iglIlGTG~-Na~yie 249 (484)
.-++..+.+.++++..|+++ ..++++..|+..+.... .+...+-+=+|.|+ +.+.+.
T Consensus 155 ~~~~~v~~~~~~~~~aGl~~--~~i~~~~~A~a~a~~~~~~~~~~~~vvDiG~gtt~i~i~~ 214 (371)
T TIGR01174 155 GSSTILRNLVKCVERCGLEV--DNIVLSGLASAIAVLTEDEKELGVCLIDIGGGTTDIAVYT 214 (371)
T ss_pred EEHHHHHHHHHHHHHcCCCe--eeEEEhhhhhhhhhcCcchhcCCEEEEEeCCCcEEEEEEE
Confidence 45567777888888777765 57889998888764322 23345556677777 555554
|
This bacterial cell division protein interacts with FtsZ, the bacterial homolog of tubulin. It is an ATP-binding protein and shows structural similarities to actin and heat shock cognate protein 70. |
| >COG0443 DnaK Molecular chaperone [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=89.68 E-value=8.6 Score=42.84 Aligned_cols=83 Identities=19% Similarity=0.199 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCcceEEEEeceeeccchhHHHHHHHHHHHHhcccCCccEEE
Q 011505 380 RKTIVELCNIVATRGARLAAAGILGVLKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVI 459 (484)
Q Consensus 380 ~~~~~~i~~~V~~RaA~l~Aa~iaaii~~~~~~~~~~~~~~~~~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~~~~~v~i 459 (484)
+..+.+++...+.|....+-.++ +..+-. ...-..++-++|+. ..|...+.+.+.+. ++. .+-
T Consensus 278 R~~~E~l~~dll~r~~~~~~~al----~~a~l~----~~~I~~VilvGGst--riP~V~~~v~~~f~----~~~---~~~ 340 (579)
T COG0443 278 RAKFEELILDLLERTIEPVEQAL----KDAGLE----KSDIDLVILVGGST--RIPAVQELVKEFFG----KEP---EKS 340 (579)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH----HHcCCC----hhhCceEEEcccee--ccHHHHHHHHHHhC----ccc---ccc
Confidence 55666777777777766665333 222211 01122566666665 67776666665543 211 111
Q ss_pred EEcCChhHHHHHHHHHHhcc
Q 011505 460 EHSNDGSGIGAALLAASHSK 479 (484)
Q Consensus 460 ~~~~Dgs~iGAAl~Aa~~~~ 479 (484)
.--+.+-.+|||+.|+..+.
T Consensus 341 inpdeava~GAa~qa~~l~~ 360 (579)
T COG0443 341 INPDEAVALGAAIQAAVLSG 360 (579)
T ss_pred CCccHHHHHHHHHHHHhhcC
Confidence 12356778999999987553
|
|
| >PLN02669 xylulokinase | Back alignment and domain information |
|---|
Probab=89.58 E-value=1.2 Score=49.31 Aligned_cols=63 Identities=11% Similarity=0.205 Sum_probs=40.7
Q ss_pred cCCCCCceeeEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeec--CCCc----cccCcc----------hhHHHHHHH
Q 011505 87 NLPTGDEKGTYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSI--PPHL----MTGTSD----------ALFDYIAAE 150 (484)
Q Consensus 87 ~lP~G~E~G~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~i--p~~~----~~~~~~----------~lfd~Ia~~ 150 (484)
+||.+. +||+||+|.|++|+.+++.+|+ ++...+..+.. |..- ...+.+ .+++-+...
T Consensus 3 ~~~~~~---~~LGiD~GT~s~Ka~l~d~~g~---vv~~a~~~~~~~~~~~~~~~gve~dp~~~~~~~~~~~~w~~al~~~ 76 (556)
T PLN02669 3 SLPEDS---LFLGFDSSTQSLKATVLDSNLR---IVASEIVHFDSDLPHYGTKDGVYRDPKVNGRIVSPTLMWVEALDLL 76 (556)
T ss_pred CCCCCC---eEEEEecccCCeEEEEEcCCCC---EEEEEEecCCcccCcCCCCCceEeCCcccCccCCCHHHHHHHHHHH
Confidence 456644 7999999999999999998775 55444433331 1111 011233 455888888
Q ss_pred HHHHH
Q 011505 151 LAKFV 155 (484)
Q Consensus 151 i~~fl 155 (484)
+++.+
T Consensus 77 l~~l~ 81 (556)
T PLN02669 77 LQKLA 81 (556)
T ss_pred HHHHH
Confidence 88876
|
|
| >COG0554 GlpK Glycerol kinase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=88.00 E-value=0.99 Score=48.30 Aligned_cols=77 Identities=19% Similarity=0.302 Sum_probs=56.4
Q ss_pred eeeEEEEEeCCceEEEEEEEeCCCcceeEEeee-eeeecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCceee
Q 011505 94 KGTYYALDLGGTNFRVLRVHLGGKGVGLINQEF-AEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQREL 172 (484)
Q Consensus 94 ~G~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~-~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~l 172 (484)
..++++||-|-|+.|..+++-+|+--.+.+..+ +.|+-|.-+ ..++.+++.-...++.+.+.+.+.. +.++..|
T Consensus 4 ~~yIlAiDqGTTssRaivfd~~g~iva~~q~e~~Q~yP~~GWV-EhDp~eIw~~~~~~l~~a~~~~~i~----~~~iaaI 78 (499)
T COG0554 4 DKYILAIDQGTTSSRAIVFDEDGNIVAIAQREFTQIYPQPGWV-EHDPLEIWASVRSVLKEALAKAGIK----PGEIAAI 78 (499)
T ss_pred ccEEEEEecCCcceeEEEECCCCCchhhhhhhhhhhCCCCCcc-ccCHHHHHHHHHHHHHHHHHHcCCC----ccceEEE
Confidence 468999999999999999988876322222222 225655544 5689999999999999999887654 3557778
Q ss_pred eee
Q 011505 173 GFT 175 (484)
Q Consensus 173 Gft 175 (484)
|+|
T Consensus 79 GIT 81 (499)
T COG0554 79 GIT 81 (499)
T ss_pred Eee
Confidence 887
|
|
| >PRK15080 ethanolamine utilization protein EutJ; Provisional | Back alignment and domain information |
|---|
Probab=87.31 E-value=8.9 Score=38.19 Aligned_cols=134 Identities=13% Similarity=0.170 Sum_probs=72.8
Q ss_pred CCCCceeeEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeecCCC-ccccCcchhHHHHHHHHHHHHhhcccccccCCC
Q 011505 89 PTGDEKGTYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPH-LMTGTSDALFDYIAAELAKFVSQESEEFKLSPG 167 (484)
Q Consensus 89 P~G~E~G~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~ip~~-~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~ 167 (484)
|.-+..+.+++||+|-|++|+...+..++ ++.. -..|.+ +..|.-.+ ++-....|..+++....... .
T Consensus 18 ~~~~~~~~~~~iDiGSssi~~vv~~~~~~---~~~~----~~~~~~~vr~G~i~d-i~~a~~~i~~~~~~ae~~~g---~ 86 (267)
T PRK15080 18 PVATESPLKVGVDLGTANIVLAVLDEDGQ---PVAG----ALEWADVVRDGIVVD-FIGAVTIVRRLKATLEEKLG---R 86 (267)
T ss_pred CCCCCCCEEEEEEccCceEEEEEEcCCCC---EEEE----EeccccccCCCEEee-HHHHHHHHHHHHHHHHHHhC---C
Confidence 33446779999999999999888765443 3321 122332 33332212 66667777777763211100 0
Q ss_pred CceeeeeeeeeeeeeeecCceEEECccHHHHHHHHHHhcCCCceEEEEEechHHHHhcccccCCCcEEEEEEccCc-ceE
Q 011505 168 RQRELGFTFSFPVMQTSINTGTLVGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRYTNKDVVAAVILGTGS-NAA 246 (484)
Q Consensus 168 ~~~~lGftFSfPv~q~~~~~G~l~G~dv~~~L~~al~r~gl~v~v~alvNDtvatlla~~y~~~~~~iglIlGTG~-Na~ 246 (484)
+...+ ..+.|..++..+ ...+.+++++.|+++ ..++++..|+..+-.+ .+ .+=+=+|-|+ +.+
T Consensus 87 ~i~~v--~~~vp~~~~~~~---------~~~~~~~~~~aGl~~--~~ii~e~~A~a~~~~~--~~-~~vvDIGggtt~i~ 150 (267)
T PRK15080 87 ELTHA--ATAIPPGTSEGD---------PRAIINVVESAGLEV--THVLDEPTAAAAVLGI--DN-GAVVDIGGGTTGIS 150 (267)
T ss_pred CcCeE--EEEeCCCCCchh---------HHHHHHHHHHcCCce--EEEechHHHHHHHhCC--CC-cEEEEeCCCcEEEE
Confidence 11222 236676643211 233557887778875 4789999887765322 22 2334455555 444
Q ss_pred EEc
Q 011505 247 YVE 249 (484)
Q Consensus 247 yie 249 (484)
++.
T Consensus 151 v~~ 153 (267)
T PRK15080 151 ILK 153 (267)
T ss_pred EEE
Confidence 543
|
|
| >TIGR02627 rhamnulo_kin rhamnulokinase | Back alignment and domain information |
|---|
Probab=86.20 E-value=1.3 Score=47.59 Aligned_cols=59 Identities=22% Similarity=0.071 Sum_probs=36.5
Q ss_pred EEEEeCCceEEEEEEEeCCCcceeE-EeeeeeeecCCCc---cccCcchhHHHHHHHHHHHHh
Q 011505 98 YALDLGGTNFRVLRVHLGGKGVGLI-NQEFAEVSIPPHL---MTGTSDALFDYIAAELAKFVS 156 (484)
Q Consensus 98 laiDlGGTnlRv~~V~l~g~~~~i~-~~~~~~~~ip~~~---~~~~~~~lfd~Ia~~i~~fl~ 156 (484)
+|||+|.|+.|+.+++.++.+.++. ...+...+...+. ..-+.+++++.+.+++++...
T Consensus 1 ~aiD~Gtt~~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~ 63 (454)
T TIGR02627 1 VAVDLGASSGRVMLASYENECQKLTLEEIHRFKNGLVSQNGHECWDIDALEQEIRLGLNKVDA 63 (454)
T ss_pred CcEeccCCchheEEEEEcCCCceEEEEEEEeCCCCCEeECCEEEEehHHHHHHHHHHHHHHhc
Confidence 5899999999999999985423343 2221111111111 112355788888888888765
|
This model describes rhamnulokinase, an enzyme that catalyzes the second step in rhamnose catabolism. |
| >KOG2517 consensus Ribulose kinase and related carbohydrate kinases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=84.51 E-value=4.8 Score=43.84 Aligned_cols=81 Identities=17% Similarity=0.224 Sum_probs=53.7
Q ss_pred eeeEEEEEeCCceEEEEEEEe-CCCcceeEEeeeeeee--cC-CCccccCcchhHHHHHHHHHHHHhhcccccccCCCCc
Q 011505 94 KGTYYALDLGGTNFRVLRVHL-GGKGVGLINQEFAEVS--IP-PHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQ 169 (484)
Q Consensus 94 ~G~~laiDlGGTnlRv~~V~l-~g~~~~i~~~~~~~~~--ip-~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~ 169 (484)
...+++||+|-|..|+++.+- +++ .......+.+ -| ...+.-++++++.-+.+||+...++-... ..
T Consensus 5 ~~~~~gIDvGTtSaR~~v~~~~~~e---~l~~~~~~i~~~~~~~~~~eq~p~eI~~~V~~ci~~~~e~l~~~------~~ 75 (516)
T KOG2517|consen 5 EPVVLGIDVGTTSARALVFNAKNGE---LLSLAQKEITQEFPKEGWVEQDPKEIWQAVCRCIEKACEKLGVL------NI 75 (516)
T ss_pred cceEEEEEcCCCceEEEEEecCCCc---cceeeeeeeeeecCCCCeEEeCHHHHHHHHHHHHHHHHHhhccc------cc
Confidence 567999999999999999983 343 2221111111 11 22335578999999999999988765432 23
Q ss_pred eeeeeeeeeeeeee
Q 011505 170 RELGFTFSFPVMQT 183 (484)
Q Consensus 170 ~~lGftFSfPv~q~ 183 (484)
...|.|.+.-+.|.
T Consensus 76 ~~~~~~~igv~~qr 89 (516)
T KOG2517|consen 76 KVVGATCIGVVNQR 89 (516)
T ss_pred cccccEEEEEEecC
Confidence 45667888877765
|
|
| >COG4972 PilM Tfp pilus assembly protein, ATPase PilM [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=84.32 E-value=5 Score=41.19 Aligned_cols=115 Identities=18% Similarity=0.319 Sum_probs=80.7
Q ss_pred eEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhccccccc-----CC----
Q 011505 96 TYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKL-----SP---- 166 (484)
Q Consensus 96 ~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~-----~~---- 166 (484)
..+|||+|-+.+++.-++-.|+..++. ++...++|.+.+..+.-.=.+-+++.|++.+.+++..... +.
T Consensus 11 ~~vGIdI~~~sVKvvqLs~~g~~~kLe--~y~~~~lp~~iv~dg~ivd~~av~~~Lk~ala~~gi~~k~aa~AVP~s~ai 88 (354)
T COG4972 11 AAVGIDIGSHSVKVVQLSRSGNRYKLE--KYASEPLPENIVADGKIVDYDAVASALKRALAKLGIKSKNAATAVPGSAAI 88 (354)
T ss_pred ceeeEeeccceEEEEEEcccCCceeee--eeeecccCccccccCCcccHHHHHHHHHHHHHhcCcchhhhhhhcCcccee
Confidence 579999999999987776556555544 4455789999886554445788999999998887654310 00
Q ss_pred ----------CC-------ceeeeeeeeeeeeeeecCceEE----------------ECccHHHHHHHHHHhcCCCceE
Q 011505 167 ----------GR-------QRELGFTFSFPVMQTSINTGTL----------------VGRDVVEELSRAMAKQGLDMSV 212 (484)
Q Consensus 167 ----------~~-------~~~lGftFSfPv~q~~~~~G~l----------------~G~dv~~~L~~al~r~gl~v~v 212 (484)
++ ....+--+|||++..+++=-.| .-+++++...++|+..|+...|
T Consensus 89 tk~i~vp~~lde~eL~~~V~~ea~~y~PyP~EEv~lDy~vlg~~~~~~e~v~Vll~AtrkE~v~~ri~a~~~AGl~~~v 167 (354)
T COG4972 89 TKTIPVPDELDEKELEDQVESEASRYIPYPLEEVNLDYQVLGPSANEPEKVQVLLVATRKEVVESRIDAFELAGLEPKV 167 (354)
T ss_pred eEEeccCCcccHHHHHHHHHHHHhhcCCCchhhcccceEEeccccCCCccEEEEEEEeehhhhHHHHHHHHHcCCCceE
Confidence 00 1245667899988776544444 5568999999999999987543
|
|
| >PTZ00400 DnaK-type molecular chaperone; Provisional | Back alignment and domain information |
|---|
Probab=83.90 E-value=6 Score=44.77 Aligned_cols=82 Identities=18% Similarity=0.206 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCcceEEEEeceeeccchhHHHHHHHHHHHHhcccCCccEEE
Q 011505 380 RKTIVELCNIVATRGARLAAAGILGVLKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVI 459 (484)
Q Consensus 380 ~~~~~~i~~~V~~RaA~l~Aa~iaaii~~~~~~~~~~~~~~~~~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~~~~~v~i 459 (484)
+..+.++|+-++.|...++-..|. ..+-. ...-..++-++||. .-|..++.+++.+. .... ..
T Consensus 336 R~efe~l~~~l~~~~~~~i~~~L~----~a~~~----~~~i~~ViLvGGss--riP~v~~~l~~~f~----~~~~--~~- 398 (663)
T PTZ00400 336 RAKLEELTHDLLKKTIEPCEKCIK----DAGVK----KDELNDVILVGGMT--RMPKVSETVKKIFG----KEPS--KG- 398 (663)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH----HcCCC----HHHCcEEEEECCcc--CChHHHHHHHHHhC----CCcc--cC-
Confidence 566677888888887666655442 22210 00012566677765 57888877777653 2111 11
Q ss_pred EEcCChhHHHHHHHHHHhc
Q 011505 460 EHSNDGSGIGAALLAASHS 478 (484)
Q Consensus 460 ~~~~Dgs~iGAAl~Aa~~~ 478 (484)
.-.+..-..|||+.|++.+
T Consensus 399 ~npdeaVA~GAAi~aa~l~ 417 (663)
T PTZ00400 399 VNPDEAVAMGAAIQAGVLK 417 (663)
T ss_pred CCCccceeeccHHHHHhhc
Confidence 1235566789999998754
|
|
| >PRK05183 hscA chaperone protein HscA; Provisional | Back alignment and domain information |
|---|
Probab=83.17 E-value=5.3 Score=44.76 Aligned_cols=83 Identities=16% Similarity=0.175 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCcceEEEEeceeeccchhHHHHHHHHHHHHhcccCCccEEE
Q 011505 380 RKTIVELCNIVATRGARLAAAGILGVLKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVI 459 (484)
Q Consensus 380 ~~~~~~i~~~V~~RaA~l~Aa~iaaii~~~~~~~~~~~~~~~~~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~~~~~v~i 459 (484)
+..+.++|+-+++|...++-..| ...+-. ...-..++-++||. .-|..++.+++.+. ... ...
T Consensus 297 r~efe~l~~~l~~~~~~~i~~~L----~~a~~~----~~~i~~ViLvGGss--riP~v~~~l~~~fg----~~~--~~~- 359 (616)
T PRK05183 297 REQFNALIAPLVKRTLLACRRAL----RDAGVE----ADEVKEVVMVGGST--RVPLVREAVGEFFG----RTP--LTS- 359 (616)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH----HHcCCC----cccCCEEEEECCcc--cChHHHHHHHHHhc----cCc--CcC-
Confidence 66677888888888776654433 322211 00112456666665 67887777776653 211 111
Q ss_pred EEcCChhHHHHHHHHHHhcc
Q 011505 460 EHSNDGSGIGAALLAASHSK 479 (484)
Q Consensus 460 ~~~~Dgs~iGAAl~Aa~~~~ 479 (484)
.-.+.+-..|||+.|+..+.
T Consensus 360 ~npdeaVA~GAAi~a~~l~~ 379 (616)
T PRK05183 360 IDPDKVVAIGAAIQADILAG 379 (616)
T ss_pred CCchHHHHHHHHHHHHHhcc
Confidence 12466778899999987553
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 484 | ||||
| 2nzt_A | 902 | Crystal Structure Of Human Hexokinase Ii Length = 9 | 7e-54 | ||
| 1bdg_A | 451 | Hexokinase From Schistosoma Mansoni Complexed With | 3e-52 | ||
| 1cza_N | 917 | Mutant Monomer Of Recombinant Human Hexokinase Type | 2e-51 | ||
| 1dgk_N | 917 | Mutant Monomer Of Recombinant Human Hexokinase Type | 2e-51 | ||
| 3o08_A | 485 | Crystal Structure Of Dimeric Klhxk1 In Crystal Form | 9e-51 | ||
| 1bg3_A | 918 | Rat Brain Hexokinase Type I Complex With Glucose An | 2e-50 | ||
| 1hkb_A | 917 | Crystal Structure Of Recombinant Human Brain Hexoki | 4e-50 | ||
| 1hkc_A | 917 | Recombinant Human Hexokinase Type I Complexed With | 4e-50 | ||
| 3hm8_A | 445 | Crystal Structure Of The C-Terminal Hexokinase Doma | 2e-49 | ||
| 1ig8_A | 486 | Crystal Structure Of Yeast Hexokinase Pii With The | 7e-49 | ||
| 4dch_A | 473 | Insights Into Glucokinase Activation Mechanism: Obs | 9e-44 | ||
| 3qic_A | 470 | The Structure Of Human Glucokinase E339k Mutation L | 1e-43 | ||
| 3f9m_A | 470 | Human Pancreatic Glucokinase In Complex With Glucos | 1e-43 | ||
| 3s41_A | 469 | Glucokinase In Complex With Activator And Glucose L | 1e-43 | ||
| 1v4t_A | 451 | Crystal Structure Of Human Glucokinase Length = 451 | 1e-43 | ||
| 1v4s_A | 455 | Crystal Structure Of Human Glucokinase Length = 455 | 1e-43 | ||
| 3fr0_A | 455 | Human Glucokinase In Complex With 2-Amino Benzamide | 1e-43 | ||
| 3imx_A | 455 | Crystal Structure Of Human Glucokinase In Complex W | 2e-43 | ||
| 3b8a_X | 485 | Crystal Structure Of Yeast Hexokinase Pi In Complex | 2e-41 |
| >pdb|2NZT|A Chain A, Crystal Structure Of Human Hexokinase Ii Length = 902 | Back alignment and structure |
|
| >pdb|1BDG|A Chain A, Hexokinase From Schistosoma Mansoni Complexed With Glucose Length = 451 | Back alignment and structure |
|
| >pdb|1CZA|N Chain N, Mutant Monomer Of Recombinant Human Hexokinase Type I Complexed With Glucose, Glucose-6-Phosphate, And Adp Length = 917 | Back alignment and structure |
|
| >pdb|1DGK|N Chain N, Mutant Monomer Of Recombinant Human Hexokinase Type I With Glucose And Adp In The Active Site Length = 917 | Back alignment and structure |
|
| >pdb|3O08|A Chain A, Crystal Structure Of Dimeric Klhxk1 In Crystal Form I Length = 485 | Back alignment and structure |
|
| >pdb|1BG3|A Chain A, Rat Brain Hexokinase Type I Complex With Glucose And Inhibitor Glucose-6-Phosphate Length = 918 | Back alignment and structure |
|
| >pdb|1HKB|A Chain A, Crystal Structure Of Recombinant Human Brain Hexokinase Type I Complexed With Glucose And Glucose-6-Phosphate Length = 917 | Back alignment and structure |
|
| >pdb|1HKC|A Chain A, Recombinant Human Hexokinase Type I Complexed With Glucose And Phosphate Length = 917 | Back alignment and structure |
|
| >pdb|3HM8|A Chain A, Crystal Structure Of The C-Terminal Hexokinase Domain Of Human Hk3 Length = 445 | Back alignment and structure |
|
| >pdb|1IG8|A Chain A, Crystal Structure Of Yeast Hexokinase Pii With The Correct Amino Acid Sequence Length = 486 | Back alignment and structure |
|
| >pdb|4DCH|A Chain A, Insights Into Glucokinase Activation Mechanism: Observation Of Multiple Distinct Protein Conformations Length = 473 | Back alignment and structure |
|
| >pdb|3QIC|A Chain A, The Structure Of Human Glucokinase E339k Mutation Length = 470 | Back alignment and structure |
|
| >pdb|3F9M|A Chain A, Human Pancreatic Glucokinase In Complex With Glucose And Activator Showing A Mobile Flap Length = 470 | Back alignment and structure |
|
| >pdb|3S41|A Chain A, Glucokinase In Complex With Activator And Glucose Length = 469 | Back alignment and structure |
|
| >pdb|1V4T|A Chain A, Crystal Structure Of Human Glucokinase Length = 451 | Back alignment and structure |
|
| >pdb|1V4S|A Chain A, Crystal Structure Of Human Glucokinase Length = 455 | Back alignment and structure |
|
| >pdb|3FR0|A Chain A, Human Glucokinase In Complex With 2-Amino Benzamide Activator Length = 455 | Back alignment and structure |
|
| >pdb|3IMX|A Chain A, Crystal Structure Of Human Glucokinase In Complex With A Synthetic Activator Length = 455 | Back alignment and structure |
|
| >pdb|3B8A|X Chain X, Crystal Structure Of Yeast Hexokinase Pi In Complex With Glucose Length = 485 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 484 | |||
| 1bdg_A | 451 | Hexokinase; phosphotransferase; HET: GLC; 2.60A {S | 1e-159 | |
| 3o8m_A | 485 | Hexokinase; rnaseh-like fold, glycolysis, glucose | 1e-154 | |
| 3f9m_A | 470 | Glucokinase; hexokinase IV, ATP-binding, diabetes | 1e-152 | |
| 3hm8_A | 445 | Hexokinase-3; glucose, glucose-6-phosphate, non-pr | 1e-149 | |
| 1cza_N | 917 | Hexokinase type I; structurally homologous domains | 1e-146 | |
| 1cza_N | 917 | Hexokinase type I; structurally homologous domains | 1e-131 | |
| 2yhx_A | 457 | Hexokinase B; transferase(phosphoryl,alcohol accep | 1e-130 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 6e-09 |
| >1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3 Length = 451 | Back alignment and structure |
|---|
Score = 458 bits (1179), Expect = e-159
Identities = 149/456 (32%), Positives = 232/456 (50%), Gaps = 35/456 (7%)
Query: 41 MKEFEEKCRTPAAKLKQVADAMTVEMHAGLASEG--GSKLKMIISYVDNLPTGDEKGTYY 98
+ E + +++ D M M GL S +KM SYV P G E G +
Sbjct: 12 VVEILKPFDLSVVDYEEICDRMGESMRLGLQKSTNEKSSIKMFPSYVTKTPNGTETGNFL 71
Query: 99 ALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQE 158
ALDLGGTN+RVL V L GKG QE IP M+G+ LF YIA LA F+
Sbjct: 72 ALDLGGTNYRVLSVTLEGKGKSPRIQER-TYCIPAEKMSGSGTELFKYIAETLADFLENN 130
Query: 159 SEEFKLSPGRQRELGFTFSFPVMQTSINTGTL------------VGRDVVEELSRAMAKQ 206
+ ++ +LGFTFSFP +Q + TL G +V E L + K+
Sbjct: 131 GMK-----DKKFDLGFTFSFPCVQKGLTHATLVRWTKGFSADGVEGHNVAELLQTELDKR 185
Query: 207 GLDMSVSALVNDTVGTLAGGRYTNKDVVAAVILGTGSNAAYVERAQAIPKWHGVPSKSGE 266
L++ A+VNDTVGTLA + +I+GTG+N AY+E + + GV K E
Sbjct: 186 ELNVKCVAVVNDTVGTLASCALEDPKCAVGLIVGTGTNVAYIEDSSKVELMDGV--KEPE 243
Query: 267 MVINMEWGDFRSS---HLSLSEYDNALDAESLNPGEQIFEKMISGMYLGEIVRRVLLRMA 323
+VIN EWG F +++D ++D +SL+PG+Q++EKM+SGMYLGE+VR +++ +
Sbjct: 244 VVINTEWGAFGEKGELDCWRTQFDKSMDIDSLHPGKQLYEKMVSGMYLGELVRHIIVYLV 303
Query: 324 QEAAFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTI 383
++ F +P +L+V +L T ++ + D + L L D L + + +
Sbjct: 304 EQKILFRGDLPERLKVRNSLLTRYLTDVERDPAHLLYNTHYMLTDDLHVPVVEPIDNRIV 363
Query: 384 VELCNIVATRGARLAAAGILGVLKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLEN 443
C +V R A LA AGI +L+++ R + + +DG LY+ + ++ + + +
Sbjct: 364 RYACEMVVKRAAYLAGAGIACILRRINRS--------EVTVGVDGSLYKFHPKFCERMTD 415
Query: 444 TLEELLGEELFKNIVIEHSNDGSGIGAALLAASHSK 479
+++L + + S DGSG GAA +AAS ++
Sbjct: 416 MVDKLKPKN--TRFCLRLSEDGSGKGAAAIAASCTR 449
|
| >3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X* Length = 485 | Back alignment and structure |
|---|
Score = 447 bits (1152), Expect = e-154
Identities = 158/465 (33%), Positives = 225/465 (48%), Gaps = 37/465 (7%)
Query: 40 IMKEFEEKCRTPAAKLKQVADAMTVEMHAGLASEGGSKLKMIISYVDNLPTGDEKGTYYA 99
+ E + K++ + E+ GL+ +GG+ + MI +V PTG E G + A
Sbjct: 26 QIHGLETLFTVSSEKMRSIVKHFISELDKGLSKKGGN-IPMIPGWVVEYPTGKETGDFLA 84
Query: 100 LDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQES 159
LDLGGTN RV+ V LGG Q + +P HL TGTS+ L+ +IA L +FV +
Sbjct: 85 LDLGGTNLRVVLVKLGGNHDFDTTQN--KYRLPDHLRTGTSEQLWSFIAKCLKEFVDEWY 142
Query: 160 EEFKLSPGRQRELGFTFSFPVMQTSINTGTL------------VGRDVVEELSRAMAKQG 207
+ LGFTFS+P Q IN+G L G DVV L + K
Sbjct: 143 PD---GVSEPLPLGFTFSYPASQKKINSGVLQRWTKGFDIEGVEGHDVVPMLQEQIEKLN 199
Query: 208 LDMSVSALVNDTVGTLAGGRYTNKDVVAAVILGTGSNAAYVERAQAIPKWHGVPSKS--- 264
+ ++V AL+NDT GTL YT+ +I+GTG N AY + I K G+ +
Sbjct: 200 IPINVVALINDTTGTLVASLYTDPQTKMGIIIGTGVNGAYYDVVSGIEKLEGLLPEDIGP 259
Query: 265 -GEMVINMEWGDFRSSHLSL--SEYDNALDAESLNPGEQIFEKMISGMYLGEIVRRVLLR 321
M IN E+G F + HL L ++YD +D ES PG+Q FEKM SG YLGEI+R VLL
Sbjct: 260 DSPMAINCEYGSFDNEHLVLPRTKYDVIIDEESPRPGQQAFEKMTSGYYLGEIMRLVLLD 319
Query: 322 MAQEAAFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRK 381
+ F D KL+ + + T S + D +L+ + K L I +T RK
Sbjct: 320 LYDSGFIFKDQDISKLKEAYVMDTSYPSKIEDDPFENLEDTDDLFKTNLNIETTV-VERK 378
Query: 382 TIVELCNIVATRGARLAAAGILGVLKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCL 441
I +L +V TR ARL G+ + K G IA DG ++ Y Y +
Sbjct: 379 LIRKLAELVGTRAARLTVCGVSAICDKRGYK--------TAHIAADGSVFNRYPGYKEKA 430
Query: 442 ENTLEELLGEELFK----NIVIEHSNDGSGIGAALLAASHSKYLQ 482
L+++ ++ K I + + DGSG+GAA++A K L
Sbjct: 431 AQALKDIYNWDVEKMEDHPIQLVAAEDGSGVGAAIIACLTQKRLA 475
|
| >3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A* Length = 470 | Back alignment and structure |
|---|
Score = 440 bits (1132), Expect = e-152
Identities = 148/462 (32%), Positives = 226/462 (48%), Gaps = 36/462 (7%)
Query: 41 MKEFEEKCRTPAAKLKQVADAMTVEMHAGLASEGG--SKLKMIISYVDNLPTGDEKGTYY 98
+++ + + LK+V M EM GL E + +KM+ +YV + P G E G +
Sbjct: 21 VEQILAEFQLQEEDLKKVMRRMQKEMDRGLRLETHEEASVKMLPTYVRSTPEGSEVGDFL 80
Query: 99 ALDLGGTNFRVLRVHLGGKGVGL--INQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVS 156
+LDLGGTNFRV+ V +G G + + SIP MTGT++ LFDYI+ ++ F+
Sbjct: 81 SLDLGGTNFRVMLVKVGEGEEGQWSVKTKHQMYSIPEDAMTGTAEMLFDYISECISDFLD 140
Query: 157 QESEEFKLSPGRQRELGFTFSFPVMQTSINTGTL------------VGRDVVEELSRAMA 204
+ + ++ LGFTFSFPV I+ G L G +VV L A+
Sbjct: 141 KHQMK-----HKKLPLGFTFSFPVRHEDIDKGILLNWTKGFKASGAEGNNVVGLLRDAIK 195
Query: 205 KQG-LDMSVSALVNDTVGTLAGGRYTNKDVVAAVILGTGSNAAYVERAQAIPKWHGVPSK 263
++G +M V A+VNDTV T+ Y + +I+GTG NA Y+E Q + G
Sbjct: 196 RRGDFEMDVVAMVNDTVATMISCYYEDHQCEVGMIVGTGCNACYMEEMQNVELVEG---D 252
Query: 264 SGEMVINMEWGDFRSSH---LSLSEYDNALDAESLNPGEQIFEKMISGMYLGEIVRRVLL 320
G M +N EWG F S L EYD +D S NPG+Q++EK+I G Y+GE+VR VLL
Sbjct: 253 EGRMCVNTEWGAFGDSGELDEFLLEYDRLVDESSANPGQQLYEKLIGGKYMGELVRLVLL 312
Query: 321 RMAQEAAFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMR 380
R+ E F +L A T +S + DT ++ + L + S +
Sbjct: 313 RLVDENLLFHGEASEQLRTRGAFETRFVSQVESDTGDRKQI--YNILSTLGL-RPSTTDC 369
Query: 381 KTIVELCNIVATRGARLAAAGILGVLKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKC 440
+ C V+TR A + +AG+ GV+ +M + D + + +DG +Y+ + + +
Sbjct: 370 DIVRRACESVSTRAAHMCSAGLAGVINRMRES--RSEDVMRITVGVDGSVYKLHPSFKER 427
Query: 441 LENTLEELLGEELFKNIVIEHSNDGSGIGAALLAASHSKYLQ 482
++ L I S +GSG GAAL++A K
Sbjct: 428 FHASVRRLTPS---CEITFIESEEGSGRGAALVSAVACKKAC 466
|
| >3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens} Length = 445 | Back alignment and structure |
|---|
Score = 432 bits (1112), Expect = e-149
Identities = 153/459 (33%), Positives = 230/459 (50%), Gaps = 37/459 (8%)
Query: 40 IMKEFEEKCRTPAAKLKQVADAMTVEMHAGLASEGGSKLKMIISYVDNLPTGDEKGTYYA 99
+++E R +L V M M GL E S L+M+ ++V P G E+G + A
Sbjct: 5 LLEETLAPFRLNHDQLAAVQAQMRKAMAKGLRGEA-SSLRMLPTFVRATPDGSERGDFLA 63
Query: 100 LDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQES 159
LDLGGTNFRVL V + SIP + G+ LFD+I + F ++
Sbjct: 64 LDLGGTNFRVLLVRVTTGV----QITSEIYSIPETVAQGSGQQLFDHIVDCIVDFQQKQG 119
Query: 160 EEFKLSPGRQRELGFTFSFPVMQTSINTGTL------------VGRDVVEELSRAMAKQG 207
G+ LGFTFSFP Q ++ G L G+DVV L A+ ++
Sbjct: 120 LS-----GQSLPLGFTFSFPCRQLGLDQGILLNWTKGFKASDCEGQDVVSLLREAITRRQ 174
Query: 208 -LDMSVSALVNDTVGTLAGGRYTNKDVVAAVILGTGSNAAYVERAQAIPKWHGVPSKSGE 266
++++V A+VNDTVGT+ Y + +I+GTG+NA Y+E + + G SG
Sbjct: 175 AVELNVVAIVNDTVGTMMSCGYEDPRCEIGLIVGTGTNACYMEELRNVAGVPG---DSGR 231
Query: 267 MVINMEWGDF---RSSHLSLSEYDNALDAESLNPGEQIFEKMISGMYLGEIVRRVLLRMA 323
M INMEWG F S + + +D ++D S+NPG+Q FEKMISGMYLGEIVR +LL +
Sbjct: 232 MCINMEWGAFGDDGSLAMLSTRFDASVDQASINPGKQRFEKMISGMYLGEIVRHILLHLT 291
Query: 324 QEAAFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTI 383
F +L+ +T +S + D S L+ V L+D L + TS +
Sbjct: 292 SLGVLFRGQQIQRLQTRDIFKTKFLSEIESD-SLALRQVRAILED-LGLPLTS-DDALMV 348
Query: 384 VELCNIVATRGARLAAAGILGVLKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLEN 443
+E+C V+ R A+L AG+ V++K+ + + ++ + +DG LY+ + +S +
Sbjct: 349 LEVCQAVSQRAAQLCGAGVAAVVEKIREN--RGLEELAVSVGVDGTLYKLHPRFSSLVAA 406
Query: 444 TLEELLGEELFKNIVIEHSNDGSGIGAALLAASHSKYLQ 482
T+ EL + S DGSG GAAL+ A + Q
Sbjct: 407 TVRELAPR---CVVTFLQSEDGSGKGAALVTAVACRLAQ 442
|
| >1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A* Length = 917 | Back alignment and structure |
|---|
Score = 441 bits (1134), Expect = e-146
Identities = 150/469 (31%), Positives = 233/469 (49%), Gaps = 34/469 (7%)
Query: 33 KCGKANGIMKEFEEKCRTPAAKLKQVADAMTVEMHAGLASEGG--SKLKMIISYVDNLPT 90
+ + + ++E L +V M EM GL + + +KM+ S+V P
Sbjct: 462 RLAEQHRQIEETLAHFHLTKDMLLEVKKRMRAEMELGLRKQTHNNAVVKMLPSFVRRTPD 521
Query: 91 GDEKGTYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAE 150
G E G + ALDLGGTNFRVL V + + +IP +M GT + LFD+I +
Sbjct: 522 GTENGDFLALDLGGTNFRVLLVKIRSGKKRTVEMHNKIYAIPIEIMQGTGEELFDHIVSC 581
Query: 151 LAKFVSQESEEFKLSPGRQRELGFTFSFPVMQTSINTGTL------------VGRDVVEE 198
++ F+ + G + LGFTFSFP QTS++ G L VG DVV
Sbjct: 582 ISDFLDYMGIK-----GPRMPLGFTFSFPCQQTSLDAGILITWTKGFKATDCVGHDVVTL 636
Query: 199 LSRAMAKQG-LDMSVSALVNDTVGTLAGGRYTNKDVVAAVILGTGSNAAYVERAQAIPKW 257
L A+ ++ D+ V A+VNDTVGT+ Y +I+GTGSNA Y+E + +
Sbjct: 637 LRDAIKRREEFDLDVVAVVNDTVGTMMTCAYEEPTCEVGLIVGTGSNACYMEEMKNVEMV 696
Query: 258 HGVPSKSGEMVINMEWGDFRSSHLS---LSEYDNALDAESLNPGEQIFEKMISGMYLGEI 314
G G+M INMEWG F + + YD +D SLN G+Q +EKMISGMYLGEI
Sbjct: 697 EG---DQGQMCINMEWGAFGDNGCLDDIRTHYDRLVDEYSLNAGKQRYEKMISGMYLGEI 753
Query: 315 VRRVLLRMAQEAAFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISS 374
VR +L+ ++ F + L+ T +S + D + L+V + L + +
Sbjct: 754 VRNILIDFTKKGFLFRGQISETLKTRGIFETKFLSQIESDRLALLQV--RAILQQLGL-N 810
Query: 375 TSLSMRKTIVELCNIVATRGARLAAAGILGVLKKMGRDAAKDGDKQKTVIAMDGGLYEHY 434
++ + +C +V+ R A+L AG+ V+ K+ + + D+ + +DG LY+ +
Sbjct: 811 STCDDSILVKTVCGVVSRRAAQLCGAGMAAVVDKIREN--RGLDRLNVTVGVDGTLYKLH 868
Query: 435 AEYSKCLENTLEELLGEELFKNIVIEHSNDGSGIGAALLAASHSKYLQD 483
+S+ + T++EL + N+ S DGSG GAAL+ A + +
Sbjct: 869 PHFSRIMHQTVKELSPK---CNVSFLLSEDGSGKGAALITAVGVRLRTE 914
|
| >1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A* Length = 917 | Back alignment and structure |
|---|
Score = 402 bits (1034), Expect = e-131
Identities = 141/440 (32%), Positives = 231/440 (52%), Gaps = 31/440 (7%)
Query: 42 KEFEEKCRTPAAKLKQVADAMTVEMHAGLASEGG--SKLKMIISYVDNLPTGDEKGTYYA 99
++ R L + EM GL+ + + +KM+ ++V ++P G EKG + A
Sbjct: 23 DKYLYAMRLSDETLIDIMTRFRKEMKNGLSRDFNPTATVKMLPTFVRSIPDGSEKGDFIA 82
Query: 100 LDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQES 159
LDLGG++FR+LRV + + ++ E P +++ G+ LFD++A L F+ +
Sbjct: 83 LDLGGSSFRILRVQVNHEKNQNVHMESEVYDTPENIVHGSGSQLFDHVAECLGDFMEKRK 142
Query: 160 EEFKLSPGRQRELGFTFSFPVMQTSINTGTL------------VGRDVVEELSRAMAKQG 207
+ K P +GFTFSFP Q+ I+ L G DVV+ L++A+ K+G
Sbjct: 143 IKDKKLP-----VGFTFSFPCQQSKIDEAILITWTKRFKASGVEGADVVKLLNKAIKKRG 197
Query: 208 -LDMSVSALVNDTVGTLAGGRYTNKDVVAAVILGTGSNAAYVERAQAIPKWHGVPSKSGE 266
D ++ A+VNDTVGT+ Y ++ +I+GTG+NA Y+E + I G G
Sbjct: 198 DYDANIVAVVNDTVGTMMTCGYDDQHCEVGLIIGTGTNACYMEELRHIDLVEG---DEGR 254
Query: 267 MVINMEWGDF---RSSHLSLSEYDNALDAESLNPGEQIFEKMISGMYLGEIVRRVLLRMA 323
M IN EWG F S +E+D A+DA SLNPG+Q+FEKM+SGMYLGE+VR +L++MA
Sbjct: 255 MCINTEWGAFGDDGSLEDIRTEFDRAIDAYSLNPGKQLFEKMVSGMYLGELVRLILVKMA 314
Query: 324 QEAAFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTI 383
+E F + P+L T D+SA+ + ++ L + S ++
Sbjct: 315 KEGLLFEGRITPELLTRGKFNTSDVSAIEKNKEGLHNA--KEILTRLGV-EPSDDDCVSV 371
Query: 384 VELCNIVATRGARLAAAGILGVLKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLEN 443
+C IV+ R A L AA + +L ++ + K + +T + +DG LY+ + +YS+
Sbjct: 372 QHVCTIVSFRSANLVAATLGAILNRLRDN--KGTPRLRTTVGVDGSLYKTHPQYSRRFHK 429
Query: 444 TLEELLGEELFKNIVIEHSN 463
TL L+ + + ++ E +
Sbjct: 430 TLRRLVPDSDVRFLLSESGS 449
|
| >2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A Length = 457 | Back alignment and structure |
|---|
Score = 383 bits (985), Expect = e-130
Identities = 84/454 (18%), Positives = 145/454 (31%), Gaps = 38/454 (8%)
Query: 40 IMKEFEEKCRTPAAKLKQVADAMTVEMHAGLASEGGSKLKMIISYVDNLPTGDEKGTYYA 99
+++ P L+ V +T +S + + M+ +V +G + G++ A
Sbjct: 8 LVEVHXXVFIVPPXILQAVVSILTTRXDDXDSS--AASIPMVPGWVLKQVSGAQAGSFLA 65
Query: 100 LDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQES 159
+ +GG + V+ + L G+ I T L+ A A F S E
Sbjct: 66 IVMGGGDLEVILISLAGRQESSIXAS--RSLAAAMSTTAIPSDLWGNXAXSNAAFSSXEF 123
Query: 160 EEFKLSPGRQRELGFTFSFPVMQTSINTGTLV----------GRDVVEELSRAMAKQGLD 209
LGFTF + + G + ++ + A G
Sbjct: 124 SS----XAGSVPLGFTFXEAGAKEXVIKGQITXQAXAFSLAXLXKLISAMXNAXFPAGDX 179
Query: 210 MSVSALVNDTVGTLAGGRYTNKDVVAAVILGTGSNAAYVERAQAIPKW--HGVPSKSGEM 267
A + D+ G L YT+ + +I G+G NAAY + I G +G M
Sbjct: 180 XXSVADIXDSHGILXXVNYTDAXIKMGIIFGSGVNAAYWCDSTXIGDAADGGXXGGAGXM 239
Query: 268 VINMEWGDFRSSHLSL--SEYDNALDAESLNPGEQIFEKMISGMYLGEIVRRVLLRMAQE 325
I + FR + SL Y L+ S + F K G+ +R VL+
Sbjct: 240 XICCDQSSFRKAFPSLPQIXYLXTLNXXS-PXAXKTFXKNSXAKNXGQSLRDVLMXFKXX 298
Query: 326 AAFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVE 385
T + + DL+ I+ + + +
Sbjct: 299 GQXH-XXXAXSFXAANVENTSYPAKIQKLPHFDLRXXXDLFXGDQGIAXKTXM-KXVVRR 356
Query: 386 LCNIVATRGARLAAAGILGVLKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTL 445
++A RL I + +K G IA G Y+ +S
Sbjct: 357 XLFLIAAYAFRLVVCXIXAICQKKGYS--------SGHIAAXGSXR-SYSGFSXNSATXN 407
Query: 446 EELLGEELF----KNIVIEHSNDGSGIGAALLAA 475
+ G K I I + DG G + ++ +
Sbjct: 408 XNIYGWPQSAXXSKPIXITPAIDGXGAASXVIXS 441
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 57.6 bits (138), Expect = 6e-09
Identities = 73/510 (14%), Positives = 141/510 (27%), Gaps = 151/510 (29%)
Query: 14 LAAGVAAAVVVCRRVKRG------GKCGKANGIMKEFEEKCRTPAAKLKQVADAMTVEMH 67
+A V + V ++ C +++ ++ +D +
Sbjct: 166 VALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKL 225
Query: 68 AGLASEGGSKLKMIIS---YVDNLPTGDE---KGTYYALDLGGTNFRVLRVHLGGKGVGL 121
++L+ ++ Y + L + A +L ++
Sbjct: 226 --RIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLS------CKI--------- 268
Query: 122 INQEFAEVSIPPHLMTGTSDA-LFDYIAAELAKFVSQESEEFKLSPGRQRELGFTFSFPV 180
L+T T + D+++A +S + L+P + L
Sbjct: 269 -------------LLT-TRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSL---LL--- 308
Query: 181 MQTSINTGTLVGRDVVEELSRAMAKQGLDMSVS---ALVNDTVGTLAGGRYTNKDVVAAV 237
++ ++L R +S + D + T ++ N D + +
Sbjct: 309 --KYLDCR-------PQDLPRE-VLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTI 358
Query: 238 I------LGTGSNAAYVERAQAIPKWHGVPSKSGEMVINMEWGDFRSSHLSLSEYD---- 287
I L +R P +P+ ++++ W D + + D
Sbjct: 359 IESSLNVLEPAEYRKMFDRLSVFPPSAHIPTI----LLSLIWFD-------VIKSDVMVV 407
Query: 288 -NALDAESL---NPGEQIFEKMISGMYL---------GEIVRRVLLRMAQEAAFFGDTVP 334
N L SL P E I +YL + R ++ F D +
Sbjct: 408 VNKLHKYSLVEKQPKESTIS--IPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLI 465
Query: 335 PKLEVPFALRTPDM----SAMHHDTSSDLKVVETKLKDILEISSTSLSMR----KTIVEL 386
P D HH LK +E + + L R K
Sbjct: 466 PPYL--------DQYFYSHIGHH-----LKNIE-HPERMTLFRMVFLDFRFLEQK----- 506
Query: 387 CNIVATRGARLAAAGILGVLKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLE 446
I A A+ IL L + K I + YE L N +
Sbjct: 507 --IRHDSTAWNASGSILNTL--------QQLKFYKPYICDNDPKYER-------LVNAIL 549
Query: 447 ELL---GEEL----FKNIV-IEHSNDGSGI 468
+ L E L + +++ I + I
Sbjct: 550 DFLPKIEENLICSKYTDLLRIALMAEDEAI 579
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 484 | |||
| 3f9m_A | 470 | Glucokinase; hexokinase IV, ATP-binding, diabetes | 100.0 | |
| 3hm8_A | 445 | Hexokinase-3; glucose, glucose-6-phosphate, non-pr | 100.0 | |
| 3o8m_A | 485 | Hexokinase; rnaseh-like fold, glycolysis, glucose | 100.0 | |
| 1bdg_A | 451 | Hexokinase; phosphotransferase; HET: GLC; 2.60A {S | 100.0 | |
| 2yhx_A | 457 | Hexokinase B; transferase(phosphoryl,alcohol accep | 100.0 | |
| 1cza_N | 917 | Hexokinase type I; structurally homologous domains | 100.0 | |
| 1cza_N | 917 | Hexokinase type I; structurally homologous domains | 100.0 | |
| 1z05_A | 429 | Transcriptional regulator, ROK family; structural | 99.96 | |
| 2qm1_A | 326 | Glucokinase; alpha-beta structure, putative helix- | 99.96 | |
| 3vgl_A | 321 | Glucokinase; ROK family, transferase; HET: BGC ANP | 99.96 | |
| 1z6r_A | 406 | MLC protein; transcriptional repressor, ROK family | 99.95 | |
| 2hoe_A | 380 | N-acetylglucosamine kinase; TM1224, structural gen | 99.94 | |
| 3vov_A | 302 | Glucokinase, hexokinase; ROK, sugar kinase, transf | 99.94 | |
| 4db3_A | 327 | Glcnac kinase, N-acetyl-D-glucosamine kinase; stru | 99.94 | |
| 3r8e_A | 321 | Hypothetical sugar kinase; ribonuclease H-like mot | 99.93 | |
| 2yhw_A | 343 | Bifunctional UDP-N-acetylglucosamine 2-epimerase/N | 99.93 | |
| 2ap1_A | 327 | Putative regulator protein; zinc binding protein, | 99.93 | |
| 4htl_A | 297 | Beta-glucoside kinase; structural genomics, sugar | 99.93 | |
| 3htv_A | 310 | D-allose kinase, allokinase; NP_418508.1, structur | 99.92 | |
| 2aa4_A | 289 | Mannac kinase, putative N-acetylmannosamine kinase | 99.92 | |
| 3epq_A | 302 | Putative fructokinase; SCRK, ADP binding, PSI2, MC | 99.9 | |
| 2gup_A | 292 | ROK family protein; sugar kinase, streptococcus pn | 99.9 | |
| 3mcp_A | 366 | Glucokinase; structural genomics, joint center for | 99.9 | |
| 1sz2_A | 332 | Glucokinase, glucose kinase; ATP-dependent, glucos | 99.87 | |
| 2q2r_A | 373 | Glucokinase 1, putative; ATPase hexose kinase fami | 99.87 | |
| 2ch5_A | 347 | NAGK protein; transferase, N-acetylglucosamine, gl | 99.83 | |
| 2e2o_A | 299 | Hexokinase; acetate and sugar kinases, HSP70, acti | 99.81 | |
| 1woq_A | 267 | Inorganic polyphosphate/ATP-glucomannokinase; tran | 99.81 | |
| 1saz_A | 381 | Probable butyrate kinase 2; askha (acetate and sug | 99.78 | |
| 3lm2_A | 226 | Putative kinase; structural genomics, joint center | 99.66 | |
| 1zxo_A | 291 | Conserved hypothetical protein Q8A1P1; NESG, BTR25 | 99.65 | |
| 1zbs_A | 291 | Hypothetical protein PG1100; alpha-beta protein., | 99.64 | |
| 1zc6_A | 305 | Probable N-acetylglucosamine kinase; NESG, Q7NU07_ | 99.63 | |
| 3ifr_A | 508 | Carbohydrate kinase, FGGY; xylulose kinase, SGX, s | 98.42 | |
| 3ll3_A | 504 | Gluconate kinase; xylulose kinase, nysgx, ATP, ADP | 97.98 | |
| 4ehu_A | 276 | Activator of 2-hydroxyisocaproyl-COA dehydratase; | 97.38 | |
| 1hux_A | 270 | Activator of (R)-2-hydroxyglutaryl-COA dehydratase | 97.33 | |
| 2p3r_A | 510 | Glycerol kinase; glycerol metabolism, allosteric r | 96.85 | |
| 4e1j_A | 520 | Glycerol kinase; structural genomics, PSI-biology, | 96.76 | |
| 3h3n_X | 506 | Glycerol kinase; ATP-binding, glycerol metabolism, | 96.73 | |
| 2dpn_A | 495 | Glycerol kinase; thermus thermophilus HB8, structu | 96.72 | |
| 2w40_A | 503 | Glycerol kinase, putative; closed conformation, ma | 96.63 | |
| 3g25_A | 501 | Glycerol kinase; IDP00743, ATP-binding, glycerol m | 96.62 | |
| 3ezw_A | 526 | Glycerol kinase; glycerol metabolism, allosteric r | 96.62 | |
| 2d4w_A | 504 | Glycerol kinase; alpha and beta protein, ribonucle | 96.52 | |
| 3l0q_A | 554 | Xylulose kinase; xlylulose kinase, SGX, PSI, struc | 96.46 | |
| 2zf5_O | 497 | Glycerol kinase; hyperthermophilic archaeon, ATP-b | 96.27 | |
| 2itm_A | 484 | Xylulose kinase, xylulokinase; ATPase, FGGY kinase | 96.26 | |
| 3hz6_A | 511 | Xylulokinase; xylulose, structural genomic, chromo | 96.25 | |
| 3jvp_A | 572 | Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, su | 96.14 | |
| 3bex_A | 249 | Type III pantothenate kinase; actin-like fold, ATP | 95.23 | |
| 2uyt_A | 489 | Rhamnulokinase; rhamnose degradation, IN-LINE phos | 95.23 | |
| 3h6e_A | 482 | Carbohydrate kinase, FGGY; novosphingobium aromati | 95.08 | |
| 3djc_A | 266 | Type III pantothenate kinase; structural genomics, | 94.46 | |
| 3i8b_A | 515 | Xylulose kinase; strain ATCC 15703 / DSM 20083, 11 | 93.2 | |
| 2ych_A | 377 | Competence protein PILM; cell cycle, type IV pilus | 92.29 | |
| 4bc3_A | 538 | Xylulose kinase; transferase, glucuronate xyluloki | 88.57 | |
| 3h1q_A | 272 | Ethanolamine utilization protein EUTJ; ethanolamin | 87.29 | |
| 2h3g_X | 268 | Biosynthetic protein; pantothenate kinase, anthrax | 85.58 | |
| 4gni_A | 409 | Putative heat shock protein; HSP70-type ATPase, AT | 85.47 | |
| 3qfu_A | 394 | 78 kDa glucose-regulated protein homolog; HSP70, K | 84.28 | |
| 3i33_A | 404 | Heat shock-related 70 kDa protein 2; protein-ADP c | 83.67 | |
| 3ezw_A | 526 | Glycerol kinase; glycerol metabolism, allosteric r | 80.02 |
| >3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-116 Score=922.38 Aligned_cols=430 Identities=35% Similarity=0.574 Sum_probs=394.1
Q ss_pred hHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCCC--CCCcceeecccccCCCCCceeeEEEEEeCCceEEEEEE
Q 011505 35 GKANGIMKEFEEKCRTPAAKLKQVADAMTVEMHAGLASEG--GSKLKMIISYVDNLPTGDEKGTYYALDLGGTNFRVLRV 112 (484)
Q Consensus 35 ~~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~--~s~l~Mlpt~v~~lP~G~E~G~~laiDlGGTnlRv~~V 112 (484)
+.+.+.++++.+.|.++.++|++|+++|..||++||++++ +|+++||||||+++|+|+|+|.|||||||||||||++|
T Consensus 15 ~~~~~~~~~~~~~f~l~~~~L~~i~~~f~~em~~GL~~~~~~~s~~~MlPTyV~~lP~G~E~G~fLAlDlGGTNfRV~~V 94 (470)
T 3f9m_A 15 GMKKEKVEQILAEFQLQEEDLKKVMRRMQKEMDRGLRLETHEEASVKMLPTYVRSTPEGSEVGDFLSLDLGGTNFRVMLV 94 (470)
T ss_dssp HHHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHHHHHSTTTTTTCSSCCEEEEEESSCCCCCCEEEEEEEESSSEEEEEEE
T ss_pred hhHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhcccCCCCCCcccccCccccCCCCCcceEEEEEEecCceEEEEEE
Confidence 3456667788888899999999999999999999999764 48899999999999999999999999999999999999
Q ss_pred EeCCCc--ceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCceeeeeeeeeeeeeeecCceEE
Q 011505 113 HLGGKG--VGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGFTFSFPVMQTSINTGTL 190 (484)
Q Consensus 113 ~l~g~~--~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~lGftFSfPv~q~~~~~G~l 190 (484)
+|.|++ .+.++..+++|+||+++|.+++++||||||+||.+|+++++.. ++.+||||||||||+|+++++|+|
T Consensus 95 ~L~g~~~~~~~~~~~~~~~~Ip~~l~~gt~~eLFd~IA~~i~~fl~~~~~~-----~~~lpLGfTFSFP~~Q~sl~~g~L 169 (470)
T 3f9m_A 95 KVGEGEEGQWSVKTKHQMYSIPEDAMTGTAEMLFDYISECISDFLDKHQMK-----HKKLPLGFTFSFPVRHEDIDKGIL 169 (470)
T ss_dssp EEEC----CEEEEEEEEEEECCHHHHSSBHHHHHHHHHHHHHHHHHHTTCS-----SSCCEEEEEECSCEEEEETTEEEE
T ss_pred EECCCCCCcceEEEEEEeecCChHhccCCHHHHHHHHHHHHHHHHhhcccc-----ccccceEEEEeccccccCCCceEE
Confidence 998764 2345556678999999999999999999999999999987643 467999999999999999999999
Q ss_pred ------------ECccHHHHHHHHHHhcC-CCceEEEEEechHHHHhcccccCCCcEEEEEEccCcceEEEcccccccCc
Q 011505 191 ------------VGRDVVEELSRAMAKQG-LDMSVSALVNDTVGTLAGGRYTNKDVVAAVILGTGSNAAYVERAQAIPKW 257 (484)
Q Consensus 191 ------------~G~dv~~~L~~al~r~g-l~v~v~alvNDtvatlla~~y~~~~~~iglIlGTG~Na~yie~~~~i~k~ 257 (484)
+|+||+++|++|++|+| +||+|+||+|||||||++++|.+++|.||+|+|||||+||+|+.++|+|+
T Consensus 170 i~WTKGF~~~~v~G~DVv~lL~~al~r~g~~~v~v~AlvNDTVgTL~s~aY~~~~~~iGlI~GTGtNa~Y~E~~~~I~k~ 249 (470)
T 3f9m_A 170 LNWTKGFKASGAEGNNVVGLLRDAIKRRGDFEMDVVAMVNDTVATMISCYYEDHQCEVGMIVGTGCNACYMEEMQNVELV 249 (470)
T ss_dssp CCCCTTCCCBTCBTSBHHHHHHHHHHHHCSCCCEEEEEECHHHHHHHHHHTTCTTEEEEEEESSSEEEEEEEEGGGCTTS
T ss_pred EeccccccCCCcCCccHHHHHHHHHHhcCCCCCcEEEEEEcCHHHHHhcccCCCCceEEEEEecCCceEEeeeccccccc
Confidence 89999999999999998 79999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcEEEeCCCCCCCCCC---CCCchhhhhhhccCCCCCcceeeeccccccHHHHHHHHHHHHHhccccCCCCCC
Q 011505 258 HGVPSKSGEMVINMEWGDFRSSH---LSLSEYDNALDAESLNPGEQIFEKMISGMYLGEIVRRVLLRMAQEAAFFGDTVP 334 (484)
Q Consensus 258 ~~~~~~~g~miIN~EwG~f~~~~---lp~T~~D~~lD~~s~npg~q~fEkm~SG~YLgei~R~il~~~~~~~~lF~~~~~ 334 (484)
++ ..++||||||||+||+++ +|+|+||+++|++|.|||+|+||||+||||||||+|++|+++++++.||++..|
T Consensus 250 ~~---~~~~miINtEwG~Fg~~~~l~~~~T~~D~~lD~~S~nPG~Q~fEKmiSG~YLGEivRliL~~l~~~~~lf~~~~~ 326 (470)
T 3f9m_A 250 EG---DEGRMCVNTEWGAFGDSGELDEFLLEYDRLVDESSANPGQQLYEKLIGGKYMGELVRLVLLRLVDENLLFHGEAS 326 (470)
T ss_dssp SC---CSSEEEEECCGGGTTTTSTTGGGCCHHHHHHHHHSSSTTSCHHHHTTCHHHHHHHHHHHHHHHHHTTCSGGGCCC
T ss_pred cC---CCCcEEEeechhhcCCCcccCCCCCcccHHHhhcCCCCCceeeccccchhhHHHHHHHHHHHHHHhCcCcCCCCc
Confidence 86 567899999999999764 579999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccChhhhhhcccCCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCc
Q 011505 335 PKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELCNIVATRGARLAAAGILGVLKKMGRDAA 414 (484)
Q Consensus 335 ~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~i~~~V~~RaA~l~Aa~iaaii~~~~~~~~ 414 (484)
++|.+||+|+|++||.|+.|++++ ..++.+++. ++++ ++.+|++.+++||++|.+|||+|+||+|+||+++++....
T Consensus 327 ~~L~~~~~l~T~~ls~ie~d~~~~-~~~~~il~~-l~~~-~~~~d~~~vr~i~~~V~~RaA~L~Aa~iaail~k~~~~~~ 403 (470)
T 3f9m_A 327 EQLRTRGAFETRFVSQVESDTGDR-KQIYNILST-LGLR-PSTTDCDIVRRACESVSTRAAHMCSAGLAGVINRMRESRS 403 (470)
T ss_dssp TTTTSTTCSCHHHHHHHHTCCSSC-HHHHHHHHH-TTCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred HHhcCCCCcCchHHhhhccCCCch-HHHHHHHHh-cCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 999999999999999999999888 889999987 8985 5669999999999999999999999999999999975321
Q ss_pred CCCCCcceEEEEeceeeccchhHHHHHHHHHHHHhcccCCccEEEEEcCChhHHHHHHHHHHhccc
Q 011505 415 KDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVIEHSNDGSGIGAALLAASHSKY 480 (484)
Q Consensus 415 ~~~~~~~~~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~~~~~v~i~~~~Dgs~iGAAl~Aa~~~~~ 480 (484)
....+++||+|||+|++||.|+++++++++++++ .++|+|++++||||+|||++||++++.
T Consensus 404 --~~~~~~~VgvDGsv~~~yp~f~~~~~~~l~~l~~---~~~v~l~~a~DGSg~GAAliAa~a~~~ 464 (470)
T 3f9m_A 404 --EDVMRITVGVDGSVYKLHPSFKERFHASVRRLTP---SCEITFIESEEGSGRGAALVSAVACKK 464 (470)
T ss_dssp --CSSEEEEEEEECHHHHHCTTHHHHHHHHHHHHCT---TEEEEEEECSSHHHHHHHHHHHHHTC-
T ss_pred --ccccceEEEEeccHHHhCchHHHHHHHHHHHHcC---CCeEEEEEcCCCcHHHHHHHHHHHHHH
Confidence 2335699999999999999999999999999984 368999999999999999999999875
|
| >3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-113 Score=892.67 Aligned_cols=421 Identities=35% Similarity=0.580 Sum_probs=386.6
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCCCCCCcceeecccccCCCCCceeeEEEEEeCCceEEEEEEEeCCCc
Q 011505 39 GIMKEFEEKCRTPAAKLKQVADAMTVEMHAGLASEGGSKLKMIISYVDNLPTGDEKGTYYALDLGGTNFRVLRVHLGGKG 118 (484)
Q Consensus 39 ~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~~s~l~Mlpt~v~~lP~G~E~G~~laiDlGGTnlRv~~V~l~g~~ 118 (484)
+.++++.++|.++.++|++|+++|..||++||++++ |+++||||||+++|+|+|+|.|||||||||||||++|+|.|.
T Consensus 4 ~~~~~~~~~f~l~~~~L~~i~~~f~~em~~GL~~~~-s~~~MlPtyv~~~P~G~E~G~~LAlDlGGTn~RV~~V~l~g~- 81 (445)
T 3hm8_A 4 RLLEETLAPFRLNHDQLAAVQAQMRKAMAKGLRGEA-SSLRMLPTFVRATPDGSERGDFLALDLGGTNFRVLLVRVTTG- 81 (445)
T ss_dssp HHHHHHHGGGSCCHHHHHHHHHHHHHHHHHHHHTSC-CSSCCEECCCCSSCCSCCCEEEEEEEESSSSEEEEEEEESSS-
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhccCC-CCCccCCCCCCCCCCCceeeEEEEEEecCCeEEEEEEEECCc-
Confidence 345566667779999999999999999999999765 889999999999999999999999999999999999999775
Q ss_pred ceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCceeeeeeeeeeeeeeecCceEE--------
Q 011505 119 VGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGFTFSFPVMQTSINTGTL-------- 190 (484)
Q Consensus 119 ~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~lGftFSfPv~q~~~~~G~l-------- 190 (484)
+...+++|+||+++|.+++++||||||+||.+|+++++.. ++.+|+|||||||++|+++++|+|
T Consensus 82 ---~~~~~~~~~ip~~~~~g~~~~LFd~Ia~~i~~fl~~~~~~-----~~~lplGftFSFP~~Q~sl~~g~Li~wtKGF~ 153 (445)
T 3hm8_A 82 ---VQITSEIYSIPETVAQGSGQQLFDHIVDCIVDFQQKQGLS-----GQSLPLGFTFSFPCRQLGLDQGILLNWTKGFK 153 (445)
T ss_dssp ---EEEEEEEECCCHHHHTSBHHHHHHHHHHHHHHHHHHHTCT-----TCCCCEEEEECSCEECSSTTCCEECCCCTTCC
T ss_pred ---eEEEEEEeccCccccCCCHHHHHHHHHHHHHHHHHHhCcc-----cccCcceEEEeeeeEeccCCceEEEEeecccc
Confidence 2334457999999999999999999999999999987642 467999999999999999999999
Q ss_pred ----ECccHHHHHHHHHHhc-CCCceEEEEEechHHHHhcccccCCCcEEEEEEccCcceEEEcccccccCcCCCCCCCC
Q 011505 191 ----VGRDVVEELSRAMAKQ-GLDMSVSALVNDTVGTLAGGRYTNKDVVAAVILGTGSNAAYVERAQAIPKWHGVPSKSG 265 (484)
Q Consensus 191 ----~G~dv~~~L~~al~r~-gl~v~v~alvNDtvatlla~~y~~~~~~iglIlGTG~Na~yie~~~~i~k~~~~~~~~g 265 (484)
+|+||+++|+++++|+ ++|++|+||+|||||||++++|.++++.||+|+|||||+||+|+.++|+++++ +.+
T Consensus 154 ~~~~~G~dv~~lL~~al~r~~~~~v~vvAivNDTvgTLla~~y~~~~~~iglIlGTGtNa~y~e~~~~i~k~~~---~~~ 230 (445)
T 3hm8_A 154 ASDCEGQDVVSLLREAITRRQAVELNVVAIVNDTVGTMMSCGYEDPRCEIGLIVGTGTNACYMEELRNVAGVPG---DSG 230 (445)
T ss_dssp CBTCTTSBHHHHHHHHHHHTTCSCCCSEEEECHHHHHHHHHHTTCTTEEEEEEESSSEEEEEEEEGGGCTTSCC---CSS
T ss_pred CCCCCCCcHHHHHHHHHHhcCCCCcceEEEecCcHHHHHhhccCCCCceEEEEEeCCceEEEEEecccccccCC---CCC
Confidence 7999999999999998 58999999999999999999999999999999999999999999999999875 467
Q ss_pred cEEEeCCCCCCCCCCC---CCchhhhhhhccCCCCCcceeeeccccccHHHHHHHHHHHHHhccccCCCCCCCCCCCCCc
Q 011505 266 EMVINMEWGDFRSSHL---SLSEYDNALDAESLNPGEQIFEKMISGMYLGEIVRRVLLRMAQEAAFFGDTVPPKLEVPFA 342 (484)
Q Consensus 266 ~miIN~EwG~f~~~~l---p~T~~D~~lD~~s~npg~q~fEkm~SG~YLgei~R~il~~~~~~~~lF~~~~~~~l~~~~~ 342 (484)
+|+||||||+||++++ |+|+||+++|++|.|||+|+||||+||||||||+|++|+++++++.||++..|+.|.+||+
T Consensus 231 ~miINtEwG~Fg~~~~l~~~~T~~D~~lD~~S~~PG~q~fEKmiSG~YLGEivRliL~~l~~~~~lf~~~~~~~L~~~~~ 310 (445)
T 3hm8_A 231 RMCINMEWGAFGDDGSLAMLSTRFDASVDQASINPGKQRFEKMISGMYLGEIVRHILLHLTSLGVLFRGQQIQRLQTRDI 310 (445)
T ss_dssp EEEEECCGGGTTTTTTTTTTCCHHHHHHHHTSSSTTSSTTGGGTSHHHHHHHHHHHHHHHHHHTSSGGGCCCGGGGSTTC
T ss_pred cEEEEcchhhcCCCCCCcCCCCccchHHhcCCCCCCceEeeeecchhhHHHHHHHHHHHHHHcCCCCCCCCcHHHcCCCC
Confidence 9999999999998764 8999999999999999999999999999999999999999999999999999999999999
Q ss_pred cChhhhhhcccCCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCcce
Q 011505 343 LRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELCNIVATRGARLAAAGILGVLKKMGRDAAKDGDKQKT 422 (484)
Q Consensus 343 l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~i~~~V~~RaA~l~Aa~iaaii~~~~~~~~~~~~~~~~ 422 (484)
|+|++||.|++|++ ++..+..+|+. |++ .++.+|++.+++||++|.+|||+|+|++|+||++++++... ....++
T Consensus 311 l~T~~ls~ie~D~~-~~~~~~~~l~~-l~~-~~t~~d~~~vr~i~~~V~~RaA~L~Aa~iaai~~k~~~~~~--~~~~~~ 385 (445)
T 3hm8_A 311 FKTKFLSEIESDSL-ALRQVRAILED-LGL-PLTSDDALMVLEVCQAVSQRAAQLCGAGVAAVVEKIRENRG--LEELAV 385 (445)
T ss_dssp SCHHHHHHHTCTTC-CHHHHHHHHHT-TTC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT--CSSEEE
T ss_pred CCcHHHHHHhcCCc-hHHHHHHHHHH-hCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc--ccccCc
Confidence 99999999999865 57788999977 999 68999999999999999999999999999999999965211 123468
Q ss_pred EEEEeceeeccchhHHHHHHHHHHHHhcccCCccEEEEEcCChhHHHHHHHHHHhccc
Q 011505 423 VIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVIEHSNDGSGIGAALLAASHSKY 480 (484)
Q Consensus 423 ~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~~~~~v~i~~~~Dgs~iGAAl~Aa~~~~~ 480 (484)
+||+|||||++||.|+++++++++++++. ++|+|.+++||||+|||++||++++.
T Consensus 386 ~VgvDGsvy~~~P~f~~~l~~~l~~l~~~---~~v~~~~s~DGSg~GAAl~AA~a~~~ 440 (445)
T 3hm8_A 386 SVGVDGTLYKLHPRFSSLVAATVRELAPR---CVVTFLQSEDGSGKGAALVTAVACRL 440 (445)
T ss_dssp EEEEECHHHHHCTTHHHHHHHHHHHHCTT---EEEEEEECSSCHHHHHHHHHHHHHHH
T ss_pred EEEEeceehccChhHHHHHHHHHHHhCCC---CcEEEEECCCCchHHHHHHHHHHHHH
Confidence 99999999999999999999999999764 58999999999999999999999875
|
| >3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-111 Score=892.27 Aligned_cols=434 Identities=35% Similarity=0.556 Sum_probs=402.3
Q ss_pred CchhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCCCCCCcceeecccccCCCCCceeeEEEEEeCCceEEEEE
Q 011505 32 GKCGKANGIMKEFEEKCRTPAAKLKQVADAMTVEMHAGLASEGGSKLKMIISYVDNLPTGDEKGTYYALDLGGTNFRVLR 111 (484)
Q Consensus 32 ~~~~~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~~s~l~Mlpt~v~~lP~G~E~G~~laiDlGGTnlRv~~ 111 (484)
.-+.++.+.+++++++|.+|.++|++|+++|..||++||++++ ++++||||||+++|+|+|+|.|||||||||||||++
T Consensus 18 ~~~~~~~~~~~~~~~~f~~~~~~L~~i~~~f~~em~~GL~~~~-~~~~MlPt~V~~lP~G~E~G~~LalDlGGTn~Rv~~ 96 (485)
T 3o8m_A 18 DVPANLMEQIHGLETLFTVSSEKMRSIVKHFISELDKGLSKKG-GNIPMIPGWVVEYPTGKETGDFLALDLGGTNLRVVL 96 (485)
T ss_dssp TSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHSSSC-CSSCCEECCCCSCCCSCCEEEEEEEEESSSEEEEEE
T ss_pred cCcHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhccCC-CCCcccCCCCCCCCCCCcceEEEEEEecCCeEEEEE
Confidence 3566889999999999999999999999999999999999764 789999999999999999999999999999999999
Q ss_pred EEeCCCcceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCceeeeeeeeeeeeeeecCceEE-
Q 011505 112 VHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGFTFSFPVMQTSINTGTL- 190 (484)
Q Consensus 112 V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~lGftFSfPv~q~~~~~G~l- 190 (484)
|++.|++. .+...++|+||++++.+++++||||||+||.+|+++++.+. ..+.+++|||||||++|+++++|+|
T Consensus 97 V~l~g~~~--~~~~~~~~~Ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~---~~~~l~lGftfSfP~~q~~i~~g~li 171 (485)
T 3o8m_A 97 VKLGGNHD--FDTTQNKYRLPDHLRTGTSEQLWSFIAKCLKEFVDEWYPDG---VSEPLPLGFTFSYPASQKKINSGVLQ 171 (485)
T ss_dssp EEEESSSC--EEEEEEEEECCTTGGGSBHHHHHHHHHHHHHHHHHHHCTTC---CSSCEEEEEEECSCEECSBTTCCEEC
T ss_pred EEECCCCc--eEEEEEEEecCchhccCCHHHHHHHHHHHHHHHHHHhcccc---cccccceEEEEeeeEEEcccCCEEEe
Confidence 99987642 22234569999999998899999999999999999876432 1457999999999999999999999
Q ss_pred -----------ECccHHHHHHHHHHhcCCCceEEEEEechHHHHhcccccCCCcEEEEEEccCcceEEEcccccccCcCC
Q 011505 191 -----------VGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRYTNKDVVAAVILGTGSNAAYVERAQAIPKWHG 259 (484)
Q Consensus 191 -----------~G~dv~~~L~~al~r~gl~v~v~alvNDtvatlla~~y~~~~~~iglIlGTG~Na~yie~~~~i~k~~~ 259 (484)
+|+||+++|+++++|+|+||+|+||+|||||||++++|.++++.||+|+|||+|+||+|+.++|+|+++
T Consensus 172 ~wtKGF~i~~~~G~dv~~~L~~al~r~gl~v~v~aivNDtv~tll~~~y~~~~~~iglIlGTG~N~~y~e~~~~i~k~~~ 251 (485)
T 3o8m_A 172 RWTKGFDIEGVEGHDVVPMLQEQIEKLNIPINVVALINDTTGTLVASLYTDPQTKMGIIIGTGVNGAYYDVVSGIEKLEG 251 (485)
T ss_dssp CCCTTCCCBTCTTSBHHHHHHHHHHHTTCCEEEEEEECHHHHHHHHHHHHCTTEEEEEEESSSEEEEEEEEGGGCGGGTT
T ss_pred eccccccCCCcCCccHHHHHHHHHHhcCCCceEEEEEEcHHHHHHHHhhCCCCcEEEEEEecCcceEEEeeccccccccc
Confidence 599999999999999999999999999999999999999999999999999999999999999999974
Q ss_pred ----CCCCCCcEEEeCCCCCCCCC--CCCCchhhhhhhccCCCCCcceeeeccccccHHHHHHHHHHHHHhccccCCCCC
Q 011505 260 ----VPSKSGEMVINMEWGDFRSS--HLSLSEYDNALDAESLNPGEQIFEKMISGMYLGEIVRRVLLRMAQEAAFFGDTV 333 (484)
Q Consensus 260 ----~~~~~g~miIN~EwG~f~~~--~lp~T~~D~~lD~~s~npg~q~fEkm~SG~YLgei~R~il~~~~~~~~lF~~~~ 333 (484)
..+..++|+||||||+|++. .+|+|+||+++|++|.|||+|+||||+||||||||+|++|+++++++.||++..
T Consensus 252 ~~~~~~~~~~~miINtEwG~F~~~~~~lp~T~~D~~lD~~S~nPG~Q~fEKmiSG~YLGEivRlil~~l~~~~~lF~~~~ 331 (485)
T 3o8m_A 252 LLPEDIGPDSPMAINCEYGSFDNEHLVLPRTKYDVIIDEESPRPGQQAFEKMTSGYYLGEIMRLVLLDLYDSGFIFKDQD 331 (485)
T ss_dssp TCCTTSCTTCEEEEECCGGGTTTTCSSSCCCHHHHHHHHHSSSTTSCHHHHHHSTTTHHHHHHHHHHHHHHTTSSSTTSC
T ss_pred cccccCCCCCcEEEEcccccCCCCcccCCCCchhhHHhhcCCCCCceeeccccccchHHHHHHHHHHHHHHcCcccCCCC
Confidence 33456789999999999875 489999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccChhhhhhcccCCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Q 011505 334 PPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELCNIVATRGARLAAAGILGVLKKMGRDA 413 (484)
Q Consensus 334 ~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~i~~~V~~RaA~l~Aa~iaaii~~~~~~~ 413 (484)
|++|.+||+|+|++||.|++|+++++..+..+|.+.|+++ ++.+|++.+++||++|.+|||+|+|++|+||++++++
T Consensus 332 ~~~L~~~~~l~T~~ls~i~~d~~~~l~~~~~~l~~~l~~~-~t~~d~~~vr~i~~~V~~RAA~L~Aa~iaail~~~~~-- 408 (485)
T 3o8m_A 332 ISKLKEAYVMDTSYPSKIEDDPFENLEDTDDLFKTNLNIE-TTVVERKLIRKLAELVGTRAARLTVCGVSAICDKRGY-- 408 (485)
T ss_dssp CGGGGSTTCSCTHHHHHHHHCCCTTCHHHHHHHHHHHCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC--
T ss_pred cHHhcCCCCcCcHHHHHHHcCCcchHHHHHHHHHHHhCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--
Confidence 9999999999999999999999999999999999999996 8999999999999999999999999999999999998
Q ss_pred cCCCCCcceEEEEeceeeccchhHHHHHHHHHHHHhcccC----CccEEEEEcCChhHHHHHHHHHHhccc
Q 011505 414 AKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEEL----FKNIVIEHSNDGSGIGAALLAASHSKY 480 (484)
Q Consensus 414 ~~~~~~~~~~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~~----~~~v~i~~~~Dgs~iGAAl~Aa~~~~~ 480 (484)
+.++||+|||||++||.|+++++++++++++... .++|+|.+++|||++|||++||++++.
T Consensus 409 ------~~~~VgvdGSv~~~~P~f~~~~~~~l~~ll~~~~~~~~~~~v~l~~a~DGSg~GAAliAa~a~~~ 473 (485)
T 3o8m_A 409 ------KTAHIAADGSVFNRYPGYKEKAAQALKDIYNWDVEKMEDHPIQLVAAEDGSGVGAAIIACLTQKR 473 (485)
T ss_dssp ------SSEEEEEESHHHHHSTTHHHHHHHHHHHHHTCCCCSGGGCSEEEEECCCTTTHHHHHHHHHHHHH
T ss_pred ------CceEEEEecChhccCccHHHHHHHHHHHHhccccccCCCceEEEEEcCCChHHHHHHHHHHHHHH
Confidence 3489999999999999999999999999987432 468999999999999999999998865
|
| >1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-102 Score=821.92 Aligned_cols=428 Identities=34% Similarity=0.570 Sum_probs=395.4
Q ss_pred hhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcC--CCCCCcceeecccccCCCCCceeeEEEEEeCCceEEEEE
Q 011505 34 CGKANGIMKEFEEKCRTPAAKLKQVADAMTVEMHAGLAS--EGGSKLKMIISYVDNLPTGDEKGTYYALDLGGTNFRVLR 111 (484)
Q Consensus 34 ~~~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~--~~~s~l~Mlpt~v~~lP~G~E~G~~laiDlGGTnlRv~~ 111 (484)
++.+.+.+++|++.|.+|.++|++|+++|..||++||++ +++|+++||||||+++|+|+|+|+|||||||||||||++
T Consensus 5 ~~~~~~~~~~~~~~f~~~~~~l~~i~~~~~~em~~gL~~~~~~~s~~~mlpt~v~~~P~G~E~G~~lalDlGGTn~Rv~~ 84 (451)
T 1bdg_A 5 DQQLFEKVVEILKPFDLSVVDYEEICDRMGESMRLGLQKSTNEKSSIKMFPSYVTKTPNGTETGNFLALDLGGTNYRVLS 84 (451)
T ss_dssp HHHHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHHHHHSHHHHTTCSCCCEECCCCSCCCSCCCEEEEEEEESSSSEEEEE
T ss_pred hHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhcccCCCCCcccccccccCCCCCCCccceEEEEEeCCCeEEEEE
Confidence 456778899999999999999999999999999999984 335899999999999999999999999999999999999
Q ss_pred EEeCC-CcceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCceeeeeeeeeeeeeeecCceEE
Q 011505 112 VHLGG-KGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGFTFSFPVMQTSINTGTL 190 (484)
Q Consensus 112 V~l~g-~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~lGftFSfPv~q~~~~~G~l 190 (484)
|+++| ++. .+...++|+||++++.+++++||||||+||.+|+++++.. .+.++||||||||++|+++++|+|
T Consensus 85 V~l~G~~~~--~~i~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~l~~~~~~-----~~~~~lG~tfsfPv~q~~~~~G~l 157 (451)
T 1bdg_A 85 VTLEGKGKS--PRIQERTYCIPAEKMSGSGTELFKYIAETLADFLENNGMK-----DKKFDLGFTFSFPCVQKGLTHATL 157 (451)
T ss_dssp EEECC-CCC--CEEEEEEECCCTTTTTSBHHHHHHHHHHHHHHHHHHTTCC-----SSCEEEEEEECSCEEEETTTEEEE
T ss_pred EecCCCCcc--eEEEEEEEecCCcccCCCHHHHHHHHHHHHHHHHHhcCCC-----ccccceEEEEeeEeccccCCCeEE
Confidence 99988 432 2222356999999888999999999999999999987642 346999999999999999999999
Q ss_pred ------------ECccHHHHHHHHHHhcCCCceEEEEEechHHHHhcccccCCCcEEEEEEccCcceEEEcccccccCcC
Q 011505 191 ------------VGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRYTNKDVVAAVILGTGSNAAYVERAQAIPKWH 258 (484)
Q Consensus 191 ------------~G~dv~~~L~~al~r~gl~v~v~alvNDtvatlla~~y~~~~~~iglIlGTG~Na~yie~~~~i~k~~ 258 (484)
+|+||+++|+++++|+|+||+|++|+||||||+++++|.++++.||+|+|||+|+||+|+.+.|+|++
T Consensus 158 ~~wtKgf~~~~~~g~dv~~~L~~al~r~~l~v~v~al~NDtv~tlla~~y~~~~~~iglIlGTG~na~yve~~~~i~~~~ 237 (451)
T 1bdg_A 158 VRWTKGFSADGVEGHNVAELLQTELDKRELNVKCVAVVNDTVGTLASCALEDPKCAVGLIVGTGTNVAYIEDSSKVELMD 237 (451)
T ss_dssp CCCCTTCCCBTCTTSBHHHHHHHHHHTTTCCEEEEEEECHHHHHHHHHHTTCTTEEEEEEESSSEEEEEEEETTTCGGGC
T ss_pred eccccccCCCCCCCCcHHHHHHHHHHHcCCCcceEEEEEchHHHHHHhcccCCCcEEEEEEeCCcceEEEEcCccccCcC
Confidence 59999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCcEEEeCCCCCCCCCC---CCCchhhhhhhccCCCCCcceeeeccccccHHHHHHHHHHHHHhccccCCCCCCC
Q 011505 259 GVPSKSGEMVINMEWGDFRSSH---LSLSEYDNALDAESLNPGEQIFEKMISGMYLGEIVRRVLLRMAQEAAFFGDTVPP 335 (484)
Q Consensus 259 ~~~~~~g~miIN~EwG~f~~~~---lp~T~~D~~lD~~s~npg~q~fEkm~SG~YLgei~R~il~~~~~~~~lF~~~~~~ 335 (484)
+. +.|||+||+|||.|++++ +|+|+||.++|..|+|||+||||||+||+||||++|+++.++.+++.+|++..|+
T Consensus 238 g~--~~g~m~In~EwG~f~~~~~~~~p~t~~D~~lD~~s~~pg~q~~Ek~~SG~yLgel~R~~l~~~~~~~~lf~~~~~~ 315 (451)
T 1bdg_A 238 GV--KEPEVVINTEWGAFGEKGELDCWRTQFDKSMDIDSLHPGKQLYEKMVSGMYLGELVRHIIVYLVEQKILFRGDLPE 315 (451)
T ss_dssp SC--SSSEEEEECCGGGTTTTSTTTTTCCHHHHHHHHTSSSTTSCTTHHHHSHHHHHHHHHHHHHHHHHTTSSGGGCCCS
T ss_pred CC--ccCcEEEecCcccCCCcccccCCCCcchhhhhhcCCCCCcccchhhhhhhHHHHHHHHHHHHhhcccccccccchH
Confidence 74 678999999999999876 8999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccChhhhhhcccCCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcC
Q 011505 336 KLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELCNIVATRGARLAAAGILGVLKKMGRDAAK 415 (484)
Q Consensus 336 ~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~i~~~V~~RaA~l~Aa~iaaii~~~~~~~~~ 415 (484)
.|.+++.|+|++||.|++|+++++..++.+++..++++.++.+|++.++++|+.|++|+|+++|++|+++++++++
T Consensus 316 ~l~~~~~l~t~~ls~i~~d~~~~~~~~~~i~~~~~~~~~~~~~d~~~~~~va~~V~~RaA~lla~~ia~i~~~~~~---- 391 (451)
T 1bdg_A 316 RLKVRNSLLTRYLTDVERDPAHLLYNTHYMLTDDLHVPVVEPIDNRIVRYACEMVVKRAAYLAGAGIACILRRINR---- 391 (451)
T ss_dssp GGGSTTCSCTTHHHHHTTCCTTCCHHHHHHHHHTSCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC----
T ss_pred hhcCCCccchHHHhhhhccCccchHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC----
Confidence 9999999999999999999999999999999987888766899999999999999999999999999999999998
Q ss_pred CCCCcceEEEEeceeeccchhHHHHHHHHHHHHhcccCCccEEEEEcCChhHHHHHHHHHHhccc
Q 011505 416 DGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVIEHSNDGSGIGAALLAASHSKY 480 (484)
Q Consensus 416 ~~~~~~~~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~~~~~v~i~~~~Dgs~iGAAl~Aa~~~~~ 480 (484)
.+++|++|||+|++||.|++++++++++++.+ ..+|++.+++|||++|||++|+++++.
T Consensus 392 ----~~~~V~i~Ggv~~~~~~~~~~l~~~l~~~~~~--~~~i~~~l~~dgs~iGAAllA~~~~~~ 450 (451)
T 1bdg_A 392 ----SEVTVGVDGSLYKFHPKFCERMTDMVDKLKPK--NTRFCLRLSEDGSGKGAAAIAASCTRQ 450 (451)
T ss_dssp ----SEEEEEEESHHHHHCTTHHHHHHHHHHHHSCT--TCEEEEEECTTHHHHHHHHHHTTC---
T ss_pred ----CceEEEEeCchhcCchhHHHHHHHHHHHHhCC--CCcEEEEECCCccHHHHHHHHHHHhhc
Confidence 34799999999999999999999999999876 468999999999999999999988753
|
| >2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-98 Score=791.35 Aligned_cols=424 Identities=20% Similarity=0.262 Sum_probs=387.9
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCCCCCCcceeecccccCCCCCceeeEEEEEeCCceEEEEEEEeCCC
Q 011505 38 NGIMKEFEEKCRTPAAKLKQVADAMTVEMHAGLASEGGSKLKMIISYVDNLPTGDEKGTYYALDLGGTNFRVLRVHLGGK 117 (484)
Q Consensus 38 ~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~~s~l~Mlpt~v~~lP~G~E~G~~laiDlGGTnlRv~~V~l~g~ 117 (484)
.+.+++|++.|.+|.++|++|+++|..||+ ||++++ |+++||||||+++|+|+|+|+||||||||||||+++|+++|+
T Consensus 6 ~~~~~~~~~~f~~~~~~L~~i~~~~~~em~-gL~~~~-~~~~mlpt~v~~~P~G~E~G~~laiDlGGTnirv~lV~~~G~ 83 (457)
T 2yhx_A 6 XSLVEVHXXVFIVPPXILQAVVSILTTRXD-DXDSSA-ASIPMVPGWVLKQVSGAQAGSFLAIVMGGGDLEVILISLAGR 83 (457)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHH-HHHSSS-CSSCCEECCCCCCCCSCCCEEEEEEEECSSEEEEEEEEEETT
T ss_pred HHHHHHHHhhhcCCHHHHHHHHHHHHHHhc-CCCCCC-CCCccCccccCCCCCCCccceEEEEEeCCCeEEEEEEEeCCC
Confidence 466788888899999999999999999999 998754 789999999999999999999999999999999999999886
Q ss_pred cceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCceeeeeeeeeeeeeeecCceEE----ECc
Q 011505 118 GVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGFTFSFPVMQTSINTGTL----VGR 193 (484)
Q Consensus 118 ~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~lGftFSfPv~q~~~~~G~l----~G~ 193 (484)
.. .+...+++++|++.+.+++++|||||+++|.+|+++++.+ ..+.+++|||||||++|+++++|+| .|.
T Consensus 84 ~~--~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~----~~~~~~lGi~fs~P~~q~~~~~g~l~~wtKgf 157 (457)
T 2yhx_A 84 QE--SSIXASRSLAAAMSTTAIPSDLWGNXAXSNAAFSSXEFSS----XAGSVPLGFTFXEAGAKEXVIKGQITXQAXAF 157 (457)
T ss_dssp EE--EEEEEEEECCTTTTSCSCTHHHHHHHHHHHHHHHHHHTSS----CSSCEEEEEECCSCCCCSBTTCCBCSSCCTTC
T ss_pred ee--EEEeeEEEEcCCccCCCCHHHHHHHHHHHHHHHHhhcccc----cccccceeeEEEEEEEEeecCceEEEeeccCC
Confidence 32 2223456999999888899999999999999999876432 1346799999999999999999988 365
Q ss_pred ------cHHHHHHHHHHhcCCCceEEEEEechHHHHhcccccCCCcEEEEEEccCcceEEEcccccccCcCCCC-C-CCC
Q 011505 194 ------DVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRYTNKDVVAAVILGTGSNAAYVERAQAIPKWHGVP-S-KSG 265 (484)
Q Consensus 194 ------dv~~~L~~al~r~gl~v~v~alvNDtvatlla~~y~~~~~~iglIlGTG~Na~yie~~~~i~k~~~~~-~-~~g 265 (484)
||+++|+++++|+|+|++|++|+||||+|+++++|.++++.||+|+|||+|+||+++.++|+|+++.. . ..+
T Consensus 158 ~i~~~~~v~~~L~~~l~r~glpv~vval~NDa~~tll~e~~~~~~~~iglilGTGvgg~~i~~~~~i~kl~~~~~~~~~g 237 (457)
T 2yhx_A 158 SLAXLXKLISAMXNAXFPAGDXXXSVADIXDSHGILXXVNYTDAXIKMGIIFGSGVNAAYWCDSTXIGDAADGGXXGGAG 237 (457)
T ss_dssp CCSSCSSBHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHHCTTEEEEEEESSSEEEEEEECGGGSSCTTSCSSSCSSC
T ss_pred CcchhHHHHHHHHHhHhhcCCcceeEEEEecchhhccchhhcCCccEEEEEECcEEEEEEEECCCcccccccccccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999986532 2 468
Q ss_pred cEEEeCCCCCCCCCC--CCCchhhhhhhccCCCCCcceeeeccccccHHHHHHHHHHHHHhccccCCCCCCCCCCCCCcc
Q 011505 266 EMVINMEWGDFRSSH--LSLSEYDNALDAESLNPGEQIFEKMISGMYLGEIVRRVLLRMAQEAAFFGDTVPPKLEVPFAL 343 (484)
Q Consensus 266 ~miIN~EwG~f~~~~--lp~T~~D~~lD~~s~npg~q~fEkm~SG~YLgei~R~il~~~~~~~~lF~~~~~~~l~~~~~l 343 (484)
+|+||+|||.|++++ +|+|+||++||..|.||| ||||||+||+||||++|+++.++.+++.+|++ .|++|.+||+|
T Consensus 238 ~~~in~EwG~f~~~~~~lp~t~~D~~lD~~s~~pG-q~fEkm~SG~yLGel~R~il~~~~~~~~lf~~-~~~~l~~~~~~ 315 (457)
T 2yhx_A 238 XMXICCDQSSFRKAFPSLPQIXYLXTLNXXSPXAX-KTFXKNSXAKNXGQSLRDVLMXFKXXGQXHXX-XAXSFXAANVE 315 (457)
T ss_dssp CEEEECCCTTTTTTCSSSCCCHHHHHHHHHSSCSC-CHHHHHHCGGGHHHHHHHHHHHHHHTTSSSSS-CCCSCCSTTCS
T ss_pred ceEEEEEcccCCCCCCcCCccccccccccccCchH-HHHHHHhhhcCcHHHHHHHHHHHhcccccccc-cchhcccccCc
Confidence 999999999998653 899999999999999999 99999999999999999999999999999998 99999999999
Q ss_pred ChhhhhhcccCCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCcceE
Q 011505 344 RTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELCNIVATRGARLAAAGILGVLKKMGRDAAKDGDKQKTV 423 (484)
Q Consensus 344 ~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~i~~~V~~RaA~l~Aa~iaaii~~~~~~~~~~~~~~~~~ 423 (484)
+|++||.++.|+++++..++.+|.+.++++ ++.+|++.++++|+.|++|||+|+|++|++|++++++ .+.+
T Consensus 316 ~t~~ls~i~~d~~~~l~~~~~il~~~~~~~-~t~~D~~~v~~ia~~V~~RaA~l~A~~iaai~~~~~~--------~~~~ 386 (457)
T 2yhx_A 316 NTSYPAKIQKLPHFDLRXXXDLFXGDQGIA-XKTXMKXVVRRXLFLIAAYAFRLVVCXIXAICQKKGY--------SSGH 386 (457)
T ss_dssp CTHHHHHHHHCCSSSCHHHHHHHHHHHTCC-CCHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTC--------SSEE
T ss_pred ChHHHHHHhcCCchhhhHHHHHHHHHhCCC-ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC--------CcEE
Confidence 999999999999899988999997779986 5999999999999999999999999999999999997 3489
Q ss_pred EEEeceeeccchhHHHHHHHHHHHHhcccC----CccEEEEEcCChhHHHHHHHHHHhcccc
Q 011505 424 IAMDGGLYEHYAEYSKCLENTLEELLGEEL----FKNIVIEHSNDGSGIGAALLAASHSKYL 481 (484)
Q Consensus 424 I~vdGsv~~~~p~f~~~l~~~l~~l~~~~~----~~~v~i~~~~Dgs~iGAAl~Aa~~~~~~ 481 (484)
|++|||+ ++||.|+++++++++++++++. ..+|+|++++|||++|||++||+++++.
T Consensus 387 V~vdGsv-~~~p~f~~~l~~~l~~l~~~~~~~~~~~~v~~~~~~dgsg~GAAl~aa~~~~~~ 447 (457)
T 2yhx_A 387 IAAXGSX-RSYSGFSXNSATXNXNIYGWPQSAXXSKPIXITPAIDGXGAASXVIXSIASAXX 447 (457)
T ss_dssp EEEESTT-TTSTTHHHHHHHHHHHHHCCCCSSGGGSSEEEEECCCTTTHHHHHHHHHHHHHH
T ss_pred EEEECCc-ccCchHHHHHHHHHHHhhCcccccccCcceEEEECCCchhhhHHHHHHHHhhhh
Confidence 9999999 9999999999999999997643 4689999999999999999999999873
|
| >1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-95 Score=829.64 Aligned_cols=428 Identities=35% Similarity=0.564 Sum_probs=387.9
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCC--CCCCcceeecccccCCCCCceeeEEEEEeCCceEEEEEEEeC
Q 011505 38 NGIMKEFEEKCRTPAAKLKQVADAMTVEMHAGLASE--GGSKLKMIISYVDNLPTGDEKGTYYALDLGGTNFRVLRVHLG 115 (484)
Q Consensus 38 ~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~--~~s~l~Mlpt~v~~lP~G~E~G~~laiDlGGTnlRv~~V~l~ 115 (484)
.+.++++.++|.+|.++|++|+++|++||++||+++ .+|+++||||||+++|+|+|+|+|||||||||||||++|++.
T Consensus 467 ~~~i~~~~~~f~~~~~~l~~i~~~~~~em~~gL~~~~~~~~~~~mlpt~v~~~P~G~E~G~~lalDlGGTn~Rv~~V~l~ 546 (917)
T 1cza_N 467 HRQIEETLAHFHLTKDMLLEVKKRMRAEMELGLRKQTHNNAVVKMLPSFVRRTPDGTENGDFLALDLGGTNFRVLLVKIR 546 (917)
T ss_dssp HHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHSHHHHTTCSSCCEECSCCSCCCSCCCEEEEEEEESSSSEEEEEEEEE
T ss_pred chhHHHHHhhhcCCHHHHHHHHHHHHHHHHHHhcccCCCCCCCceECCCCCCCCCCCcceEEEEEEECCCcEEEEEEEeC
Confidence 345678888889999999999999999999999854 358899999999999999999999999999999999999997
Q ss_pred CCcceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCceeeeeeeeeeeeeeecCceEE-----
Q 011505 116 GKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGFTFSFPVMQTSINTGTL----- 190 (484)
Q Consensus 116 g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~lGftFSfPv~q~~~~~G~l----- 190 (484)
+.+.++++...++|+||++++.+++++||||||+||.+|+++++.. .+.++||||||||++|+++++|.|
T Consensus 547 ~g~~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~l~~~~~~-----~~~l~lG~tfsfPv~q~~i~~~~L~~WtK 621 (917)
T 1cza_N 547 SGKKRTVEMHNKIYAIPIEIMQGTGEELFDHIVSCISDFLDYMGIK-----GPRMPLGFTFSFPCQQTSLDAGILITWTK 621 (917)
T ss_dssp CSTTCEEEEEEEEECCCHHHHTSBHHHHHHHHHHHHHHHHHHHTCC-----SSCCEEEEEECSCEEEEETTEEEECCCCT
T ss_pred CCcceeEEeeeeEEecCcccccCCHHHHHHHHHHHHHHHHHHcCCC-----ccceeEEEEeeccccccccCccEECceec
Confidence 4332355555567999999888899999999999999999986542 346899999999999999999999
Q ss_pred -------ECccHHHHHHHHHHhc-CCCceEEEEEechHHHHhcccccCCCcEEEEEEccCcceEEEcccccccCcCCCCC
Q 011505 191 -------VGRDVVEELSRAMAKQ-GLDMSVSALVNDTVGTLAGGRYTNKDVVAAVILGTGSNAAYVERAQAIPKWHGVPS 262 (484)
Q Consensus 191 -------~G~dv~~~L~~al~r~-gl~v~v~alvNDtvatlla~~y~~~~~~iglIlGTG~Na~yie~~~~i~k~~~~~~ 262 (484)
+|+||+++|+++++|+ ++||++++|+|||||||++++|.++++.||+|+|||+|+||+|+.++|+++.+
T Consensus 622 gf~~~~~~g~dv~~~L~~al~r~~~~~v~~val~NDtv~tlla~~y~~~~~~iglIlGTG~na~y~e~~~~i~~~~g--- 698 (917)
T 1cza_N 622 GFKATDCVGHDVVTLLRDAIKRREEFDLDVVAVVNDTVGTMMTCAYEEPTCEVGLIVGTGSNACYMEEMKNVEMVEG--- 698 (917)
T ss_dssp TCCCBSCTTSBHHHHHHHHHHHHTSCCCEEEEEECHHHHHHHHHHTTCTTEEEEEEESSSEEEEEEEETTTCTTSSC---
T ss_pred ccccCCcCCCcHHHHHHHHHHhcCCCCceEEEEEEccHHHHHHhccCCCCcEEEEEEeCCeeEEEEEcCccccCcCC---
Confidence 7999999999999987 79999999999999999999999999999999999999999999999999874
Q ss_pred CCCcEEEeCCCCCCCCCC---CCCchhhhhhhccCCCCCcceeeeccccccHHHHHHHHHHHHHhccccCCCCCCCCCCC
Q 011505 263 KSGEMVINMEWGDFRSSH---LSLSEYDNALDAESLNPGEQIFEKMISGMYLGEIVRRVLLRMAQEAAFFGDTVPPKLEV 339 (484)
Q Consensus 263 ~~g~miIN~EwG~f~~~~---lp~T~~D~~lD~~s~npg~q~fEkm~SG~YLgei~R~il~~~~~~~~lF~~~~~~~l~~ 339 (484)
+.+||+||+|||.||+++ +|+|+||++||+.|.|||+||||||+||+||||++|+++.++.+++.+|.+..|+.|.+
T Consensus 699 ~~g~m~In~EwG~fg~~~~l~~~~T~~D~~~d~~s~~pG~q~~Ek~~SG~yLgel~R~il~~~~~~~~lf~~~~~~~l~~ 778 (917)
T 1cza_N 699 DQGQMCINMEWGAFGDNGCLDDIRTHYDRLVDEYSLNAGKQRYEKMISGMYLGEIVRNILIDFTKKGFLFRGQISETLKT 778 (917)
T ss_dssp CSSEEEEECCGGGTTTTSTTTTTCCHHHHHHHHTSTTTTSCTTGGGTSTTTHHHHHHHHHHHHHHTTSSGGGCCCTTTTS
T ss_pred CcCcEEEecccccCCCcccccCCCCchhhhhhhcCCCCCCCchHHhhhHhHHHHHHHHHHHHhcccccccccccchhhcc
Confidence 678999999999999865 58999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccChhhhhhcccCCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCC
Q 011505 340 PFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELCNIVATRGARLAAAGILGVLKKMGRDAAKDGDK 419 (484)
Q Consensus 340 ~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~i~~~V~~RaA~l~Aa~iaaii~~~~~~~~~~~~~ 419 (484)
++.|+|++||.++.|++ ++..++.+++. +++ .++.+|++.++++|+.|++|||+|+|++|++|+++++++.. .+.
T Consensus 779 ~~~~~t~~ls~ie~d~~-~~~~~~~i~~~-~~~-~~~~~D~~~~~~ia~~v~~RaA~l~a~~iaai~~~~~~~~~--~~~ 853 (917)
T 1cza_N 779 RGIFETKFLSQIESDRL-ALLQVRAILQQ-LGL-NSTCDDSILVKTVCGVVSRRAAQLCGAGMAAVVDKIRENRG--LDR 853 (917)
T ss_dssp TTCSCHHHHHHHTCSSC-CHHHHHHHHHH-HTC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT--CSS
T ss_pred CCccchHHhhhhhcCcc-hhhHHHHHHHH-hCC-CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccc--cCc
Confidence 99999999999999987 46688888876 888 47899999999999999999999999999999999976321 222
Q ss_pred cceEEEEeceeeccchhHHHHHHHHHHHHhcccCCccEEEEEcCChhHHHHHHHHHHhcccc
Q 011505 420 QKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVIEHSNDGSGIGAALLAASHSKYL 481 (484)
Q Consensus 420 ~~~~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~~~~~v~i~~~~Dgs~iGAAl~Aa~~~~~~ 481 (484)
.+.+|++|||||++||.|+++++++++++.+. .+|+|++++|||++|||++||++.+..
T Consensus 854 ~~~~V~vdGsv~~~~p~f~~~~~~~l~~l~~~---~~v~~~~~~dgsg~GAAl~aa~~~~~~ 912 (917)
T 1cza_N 854 LNVTVGVDGTLYKLHPHFSRIMHQTVKELSPK---CNVSFLLSEDGSGKGAALITAVGVRLR 912 (917)
T ss_dssp EEEEEEEECHHHHHCTTHHHHHHHHHHHHSTT---EEEEEEECSSCSHHHHHHHHHHHHHHH
T ss_pred cceEEEECCHHHHcCcHHHHHHHHHHHHhCCC---CceEEEEecCChHHHHHHHHHHHHHHH
Confidence 45899999999999999999999999999742 579999999999999999999998764
|
| >1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-83 Score=730.21 Aligned_cols=429 Identities=34% Similarity=0.581 Sum_probs=383.5
Q ss_pred hhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCCC--CCCcceeecccccCCCCCceeeEEEEEeCCceEEEEE
Q 011505 34 CGKANGIMKEFEEKCRTPAAKLKQVADAMTVEMHAGLASEG--GSKLKMIISYVDNLPTGDEKGTYYALDLGGTNFRVLR 111 (484)
Q Consensus 34 ~~~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~--~s~l~Mlpt~v~~lP~G~E~G~~laiDlGGTnlRv~~ 111 (484)
+..+.+.+++|.+.|.+|.++|++|+++|..||++||++++ .|+++||||||+++|+|+|+|+||||||||||||+++
T Consensus 15 ~~~~~~~~~~~~~~f~~~~~~l~~i~~~~~~em~~gL~~~~~~~s~~~mlpt~v~~~P~G~E~G~~laiDlGGTnirv~l 94 (917)
T 1cza_N 15 KDDQVKKIDKYLYAMRLSDETLIDIMTRFRKEMKNGLSRDFNPTATVKMLPTFVRSIPDGSEKGDFIALDLGGSSFRILR 94 (917)
T ss_dssp -CHHHHHHHHHTGGGSCCHHHHHHHHHHHHHHHHHHHCTTTGGGCSSCCEECCCCSCCCSCCCEEEEEEEESSSSEEEEE
T ss_pred CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhccCCCCCCcccccccccCCCCCCCCcceEEEEEeCCCeEEEEE
Confidence 33455668899999999999999999999999999998754 4789999999999999999999999999999999999
Q ss_pred EEeCCCcceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCceeeeeeeeeeeeeeecCceEE-
Q 011505 112 VHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGFTFSFPVMQTSINTGTL- 190 (484)
Q Consensus 112 V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~lGftFSfPv~q~~~~~G~l- 190 (484)
|+++|++...++...+++++|++++.+++++|||||+++|.+|+++++.. .+.+++|||||||++|+++++|++
T Consensus 95 v~~~G~~~~~i~~~~~~~~ip~~~~~~~~~~lf~~Ia~~i~~~l~~~~~~-----~~~~~lGi~fs~P~~q~~~~~G~l~ 169 (917)
T 1cza_N 95 VQVNHEKNQNVHMESEVYDTPENIVHGSGSQLFDHVAECLGDFMEKRKIK-----DKKLPVGFTFSFPCQQSKIDEAILI 169 (917)
T ss_dssp EEEEEETTEEEEEEEEEECCCHHHHSSBHHHHHHHHHHHHHHHHHHHTCT-----TSCCCEEEEECSCEECSSTTCCEEC
T ss_pred EEecCCCcceEEEEEEEEECCcccccCCHHHHHHHHHHHHHHHHHhcCCC-----CCcccEEEEEccccccCcCCceEEE
Confidence 99987533333233456899988777789999999999999999876532 235799999999999999999998
Q ss_pred -----------ECccHHHHHHHHHHhcC-CCceEEEEEechHHHHhcccccCCCcEEEEEEccCcceEEEcccccccCcC
Q 011505 191 -----------VGRDVVEELSRAMAKQG-LDMSVSALVNDTVGTLAGGRYTNKDVVAAVILGTGSNAAYVERAQAIPKWH 258 (484)
Q Consensus 191 -----------~G~dv~~~L~~al~r~g-l~v~v~alvNDtvatlla~~y~~~~~~iglIlGTG~Na~yie~~~~i~k~~ 258 (484)
+|+||+++|+++|+|+| +|+++++|+||||||+++++|.++++.||+|+|||+|+||++++++|+++.
T Consensus 170 ~wtkgfni~~~~g~~v~~~L~~~l~r~g~~pv~~val~NDa~~tll~e~~~~~~~~iglilGTGvngg~i~~g~~i~~~~ 249 (917)
T 1cza_N 170 TWTKRFKASGVEGADVVKLLNKAIKKRGDYDANIVAVVNDTVGTMMTCGYDDQHCEVGLIIGTGTNACYMEELRHIDLVE 249 (917)
T ss_dssp CCCTTCCCBTCTTSBHHHHHHHHHHHHCSCCCCEEEEECHHHHHHHHHHHHCTTEEEEEEESSSEEEEEEEEGGGCTTSS
T ss_pred ecccCCCCCcccCCchHHHHHHHHhhcCCCCceEEEEEEhhHHHHHHhhccCCCcEEEEEEECCcceEEEecCccccccc
Confidence 48899999999999987 899999999999999999999999999999999999999999999999887
Q ss_pred CCCCCCCcEEEeCCCCCCCCCC---CCCchhhhhhhccCCCCCcceeeeccccccHHHHHHHHHHHHHhccccCCCCCCC
Q 011505 259 GVPSKSGEMVINMEWGDFRSSH---LSLSEYDNALDAESLNPGEQIFEKMISGMYLGEIVRRVLLRMAQEAAFFGDTVPP 335 (484)
Q Consensus 259 ~~~~~~g~miIN~EwG~f~~~~---lp~T~~D~~lD~~s~npg~q~fEkm~SG~YLgei~R~il~~~~~~~~lF~~~~~~ 335 (484)
+ ..|||+||+|||.|++++ +|+|+||..+|..|+|||+||||||+||+||||++|+++.++.+++.+|.+..|+
T Consensus 250 G---~~g~~~in~E~G~f~~~~~l~~~~t~~D~~~dc~~g~pg~g~~Ek~~SG~yLgel~r~~l~~~~~~~~~~~~~~~~ 326 (917)
T 1cza_N 250 G---DEGRMCINTEWGAFGDDGSLEDIRTEFDRAIDAYSLNPGKQLFEKMVSGMYLGELVRLILVKMAKEGLLFEGRITP 326 (917)
T ss_dssp C---CSSEEEEECCGGGTTTTTTTTTTCCHHHHHHHHTSSSTTSSTTHHHHSHHHHHHHHHHHHHHHHHTTSSGGGCCCT
T ss_pred C---CCCceEEeccccccCCccccccCCCccccccccCCcCCCccHhHHHhhhhhHHHHHHHHHHHhhccccccccccch
Confidence 6 367999999999998765 4699999999999999999999999999999999999999998888889888888
Q ss_pred CCCCCCccChhhhhhcccCCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--CCCC
Q 011505 336 KLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELCNIVATRGARLAAAGILGVLKKM--GRDA 413 (484)
Q Consensus 336 ~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~i~~~V~~RaA~l~Aa~iaaii~~~--~~~~ 413 (484)
.|.+++.|++++|+.++ |+++++..+..+++. ++++ ++..|++.++++|+.|++|+|+++|++|++|++++ +|.
T Consensus 327 ~l~~~~~l~t~~vs~~~-~~~~~~~~~~~i~~~-~~~~-~~~~D~~~~~~~a~~v~~raa~llA~gia~ii~~l~~dp~- 402 (917)
T 1cza_N 327 ELLTRGKFNTSDVSAIE-KNKEGLHNAKEILTR-LGVE-PSDDDCVSVQHVCTIVSFRSANLVAATLGAILNRLRDNKG- 402 (917)
T ss_dssp TTTSTTSSCHHHHHHHT-CTTTHHHHHHHHHHH-TTCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-
T ss_pred hhccccccChHHHHHHh-cccccHHHHHHHHHH-hCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCc-
Confidence 99999999999999998 557788889999987 7884 78999999999999999999999999999999999 552
Q ss_pred cCCCCCcceEEEEeceeeccchhHHHHHHHHHHHHhcccCCccEEEEEcCChhHHHHHHHHHHhccc
Q 011505 414 AKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVIEHSNDGSGIGAALLAASHSKY 480 (484)
Q Consensus 414 ~~~~~~~~~~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~~~~~v~i~~~~Dgs~iGAAl~Aa~~~~~ 480 (484)
.+.++.+|++|||||++||.|+++++++++++++. ..++|++++|||++|||++||++++.
T Consensus 403 ---~~~~~~~IvigGgV~~~~~~~~~~l~~~l~~~~~~---~~~~i~~a~dgs~~GAA~laa~~~~l 463 (917)
T 1cza_N 403 ---TPRLRTTVGVDGSLYKTHPQYSRRFHKTLRRLVPD---SDVRFLLSESGSGKGAAMVTAVAYRL 463 (917)
T ss_dssp ---CSSEEEEEEEECHHHHHCSSHHHHHHHHHHHHCTT---EEEEEEECTTCHHHHHHHHHHHHHHH
T ss_pred ---ccCcceEEEECCchhhccHHHHHHHHHHHHHhcCC---CceEEEEeccchHHHHHHHHHhHhhh
Confidence 12245899999999999999999999999998732 57999999999999999999998764
|
| >1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 | Back alignment and structure |
|---|
Probab=99.96 E-value=6.3e-27 Score=246.01 Aligned_cols=334 Identities=15% Similarity=0.151 Sum_probs=244.8
Q ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHhhcCCCC----C---CcceeecccccCCCCCceeeEEEEEeCCceEEEEEEEeCC
Q 011505 44 FEEKCRTPAAKLKQVADAMTVEMHAGLASEGG----S---KLKMIISYVDNLPTGDEKGTYYALDLGGTNFRVLRVHLGG 116 (484)
Q Consensus 44 ~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~~----s---~l~Mlpt~v~~lP~G~E~G~~laiDlGGTnlRv~~V~l~g 116 (484)
+.+.+.++..++..+.++|.+ +||-.+.+ | .-+.+.++. | +.+++|+||+|||++|++++++.|
T Consensus 59 la~~~gls~~tv~~~v~~L~~---~gli~~~~~~~~s~~GR~~~~l~~~---~---~~~~~lGIDiGgt~i~~~l~d~~G 129 (429)
T 1z05_A 59 LSKESELAPASITKITRELID---AHLIHETTVQEAISRGRPAVGLQTN---N---LGWQFLSMRLGRGYLTIALHELGG 129 (429)
T ss_dssp HHHHHTCCHHHHHHHHHHHHH---TTSEEEECHHHHHHHTSCCEEEEEC---C---TTEEEEEEEEETTEEEEEEEETTS
T ss_pred HHHHHCCCHHHHHHHHHHHHH---CCCEEeccccCCCCCCCCCeEEEEC---C---CCCEEEEEEECCCEEEEEEECCCC
Confidence 344556777777888777766 67633211 0 112233332 2 457899999999999999999988
Q ss_pred CcceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCceeeeeeeeeeeeeeecCceEE------
Q 011505 117 KGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGFTFSFPVMQTSINTGTL------ 190 (484)
Q Consensus 117 ~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~lGftFSfPv~q~~~~~G~l------ 190 (484)
+ ++.+. .++.|. .+.+++++.|++.|.+++++.+.. ..+...+|+++++|++ ..+|++
T Consensus 130 ~---il~~~--~~~~~~----~~~~~~~~~l~~~i~~~~~~~~~~----~~~i~gigi~~pG~vd---~~~g~v~~~~~l 193 (429)
T 1z05_A 130 E---VLIDT--KIDIHE----IDQDDVLARLLFEIEEFFQTYAAQ----LDRVTSIAITLPGLVN---SEQGIVLQMPHY 193 (429)
T ss_dssp C---EEEEE--EEECCC----CBHHHHHHHHHHHHHHHHHHTTTT----CCEEEEEEEEESSEEE---TTTTEEEECSSS
T ss_pred C---EEEEE--EEcCCC----CCHHHHHHHHHHHHHHHHHhcCCC----cCceEEEEEeccCcEe---CCCCeEeecCCC
Confidence 5 55432 244432 247889999999999999876532 1346789999999998 445554
Q ss_pred --ECccHHHHHHHHHHhcCCCceEEEEEechHHHHhccccc----CCCcEEEEEEccCcceEEEcccccccCcCCCCCCC
Q 011505 191 --VGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRYT----NKDVVAAVILGTGSNAAYVERAQAIPKWHGVPSKS 264 (484)
Q Consensus 191 --~G~dv~~~L~~al~r~gl~v~v~alvNDtvatlla~~y~----~~~~~iglIlGTG~Na~yie~~~~i~k~~~~~~~~ 264 (484)
.+.++.+.|++.+ ++|| .|.||++++++++.|. +.++.+.+++|||++++++.+++.+.+.++.++|.
T Consensus 194 ~w~~~~l~~~L~~~~---~~pV---~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtGiG~giv~~G~l~~G~~g~AGEi 267 (429)
T 1z05_A 194 NVKNLALGPEIYKAT---GLPV---FVANDTRAWALAEKLFGHSQDVDNSVLISIHHGLGAGIVLDGRVLQGRHGNIGEL 267 (429)
T ss_dssp BCSSBCHHHHHHHHH---CSCE---EEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSSEEEEEEETTEECCTTTTCTTBC
T ss_pred CCCCCCHHHHHHHHh---CCCE---EEechhHHHHHHHHHhCCCCCCCcEEEEEECCcEEEEEEECCEEeeCCCCccccc
Confidence 5689999999999 8884 6999999999999865 46889999999999999999999999999999999
Q ss_pred CcEEEeCCCCCCCCCCCCCchhhhhhhccCCCCCcceeeeccccccHHHHHHHHHHHHHhccccCCCCCCCCCCCCCccC
Q 011505 265 GEMVINMEWGDFRSSHLSLSEYDNALDAESLNPGEQIFEKMISGMYLGEIVRRVLLRMAQEAAFFGDTVPPKLEVPFALR 344 (484)
Q Consensus 265 g~miIN~EwG~f~~~~lp~T~~D~~lD~~s~npg~q~fEkm~SG~YLgei~R~il~~~~~~~~lF~~~~~~~l~~~~~l~ 344 (484)
|||.++.++..|. |++. +|+|.++|+..|-+.++..+. .+ .++.+..
T Consensus 268 GH~~v~~~g~~c~----------------cG~~--gclE~~~S~~al~~~~~~~~~----~~------~~~~l~~----- 314 (429)
T 1z05_A 268 GHIQIDPQGKRCH----------------CGNY--GCLETVASSQAIRDQVTARIQ----AG------EPSCLAT----- 314 (429)
T ss_dssp TTSBCCTTCCBCT----------------TSCB--SBTHHHHSHHHHHHHHHHHHH----TT------CCCTTTT-----
T ss_pred CceEEcCCCCCCC----------------CCCC--cchHHHhCHHHHHHHHHHHhh----cc------ccccccc-----
Confidence 9999987655553 7776 699999999998665544221 11 0111100
Q ss_pred hhhhhhcccCCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCcceEE
Q 011505 345 TPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELCNIVATRGARLAAAGILGVLKKMGRDAAKDGDKQKTVI 424 (484)
Q Consensus 345 t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~i~~~V~~RaA~l~Aa~iaaii~~~~~~~~~~~~~~~~~I 424 (484)
.+.. ....+++. ++..+..|..+++++++++|.+|+++++.++| ..|
T Consensus 315 ---------~~~~---~~~~i~~~-----------a~~gD~~a~~il~~~~~~L~~~i~~l~~~ldP----------~~I 361 (429)
T 1z05_A 315 ---------VEEI---SIEDICAA-----------AADGDPLAVDVIQQLGRYLGAAIAIVINLFNP----------EKI 361 (429)
T ss_dssp ---------CSSC---CHHHHHHH-----------HHTTCHHHHHHHHHHHHHHHHHHHHHHHHHCC----------SEE
T ss_pred ---------ccCC---CHHHHHHH-----------HHcCCHHHHHHHHHHHHHHHHHHHHHHHhcCC----------CEE
Confidence 0000 12333333 44556889999999999999999999999998 579
Q ss_pred EEeceeeccchhHHHHHHHHHHHHhcccCCccEEEEE---cCChhHHHHHHHHH
Q 011505 425 AMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVIEH---SNDGSGIGAALLAA 475 (484)
Q Consensus 425 ~vdGsv~~~~p~f~~~l~~~l~~l~~~~~~~~v~i~~---~~Dgs~iGAAl~Aa 475 (484)
.++|++....|.|.+.+++.+++...+.....+.|.. .+| +.+|||.++.
T Consensus 362 vlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~I~~s~l~~~-~~~GAa~l~~ 414 (429)
T 1z05_A 362 LIGGVINQAKSILYPSIEQCIREQSLPVYHQDLKLVESRFYKQ-ATMPGAALIK 414 (429)
T ss_dssp EEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSCSSC-TTHHHHHHHH
T ss_pred EEeCccccchHHHHHHHHHHHHHhcccccCCCcEEEEecCCCc-cHHHHHHHHH
Confidence 9999999999999999999998774332122455554 678 9999998864
|
| >2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.9e-27 Score=237.74 Aligned_cols=300 Identities=17% Similarity=0.178 Sum_probs=224.1
Q ss_pred eeeEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCceeee
Q 011505 94 KGTYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELG 173 (484)
Q Consensus 94 ~G~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~lG 173 (484)
.+++|+||+|||++|++++++.|+ ++.+. +++.|.. .+.+++++.+++.|.+++++.+.. ..+...+|
T Consensus 5 ~~~~lgiDiggt~~~~~l~d~~g~---il~~~--~~~~~~~---~~~~~~~~~l~~~i~~~~~~~~~~----~~~i~~ig 72 (326)
T 2qm1_A 5 DKKIIGIDLGGTTIKFAILTTDGV---VQQKW--SIETNIL---EDGKHIVPSIIESIRHRIDLYNMK----KEDFVGIG 72 (326)
T ss_dssp GCEEEEEEECSSEEEEEEEETTCC---EEEEE--EEECCCT---TTTTTHHHHHHHHHHHHHHHTTCC----GGGEEEEE
T ss_pred ccEEEEEEECCCEEEEEEECCCCC---EEEEE--EEcCCCC---CCHHHHHHHHHHHHHHHHHHcCCC----ccceeEEE
Confidence 358999999999999999999875 55432 2444432 357889999999999999876532 13467899
Q ss_pred eeeeeeeeeeecCceEE--------ECc-cHHHHHHHHHHhcCCCceEEEEEechHHHHhccccc----CCCcEEEEEEc
Q 011505 174 FTFSFPVMQTSINTGTL--------VGR-DVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRYT----NKDVVAAVILG 240 (484)
Q Consensus 174 ftFSfPv~q~~~~~G~l--------~G~-dv~~~L~~al~r~gl~v~v~alvNDtvatlla~~y~----~~~~~iglIlG 240 (484)
++++.|++ ..+|++ .+. ++.+.|++.+ ++| +.|.||++++++++.|. +.++.+.+++|
T Consensus 73 i~~pG~vd---~~~g~v~~~~~l~w~~~~~l~~~l~~~~---~~p---v~v~ND~~aaa~~e~~~g~~~~~~~~~~l~~G 143 (326)
T 2qm1_A 73 MGTPGSVD---IEKGTVVGAYNLNWTTVQPVKEQIESAL---GIP---FALDNDANVAALGERWKGAGENNPDVIFITLG 143 (326)
T ss_dssp EEESSEEE---TTTTEEECBGGGTBCSCBCHHHHHHHHH---CSC---EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEES
T ss_pred Eeccccee---CCCCEEEecCCCCccCCchHHHHHHHHh---CCC---EEEecHHHHHHHHHHHhCCCCCCCcEEEEEEC
Confidence 99999998 455554 567 9999999998 888 46999999999999864 46789999999
Q ss_pred cCcceEEEcccccccCcCCCCCCCCcEEEeCCCCCCCCCCCCCchhhhhhhccCCCCCcceeeeccccccHHHHHHHHHH
Q 011505 241 TGSNAAYVERAQAIPKWHGVPSKSGEMVINMEWGDFRSSHLSLSEYDNALDAESLNPGEQIFEKMISGMYLGEIVRRVLL 320 (484)
Q Consensus 241 TG~Na~yie~~~~i~k~~~~~~~~g~miIN~EwG~f~~~~lp~T~~D~~lD~~s~npg~q~fEkm~SG~YLgei~R~il~ 320 (484)
||++++++.+++.+.+.++.+++.|||.++.++..|. |++. +|+|.++|+.+|-+.++..+.
T Consensus 144 tGiG~giv~~G~l~~G~~g~aGE~Gh~~~~~~g~~c~----------------cG~~--gcle~~~s~~~l~~~~~~~~~ 205 (326)
T 2qm1_A 144 TGVGGGIVAAGKLLHGVAGCAGEVGHVTVDPNGFDCT----------------CGKR--GCLETVSSATGVVRVARHLSE 205 (326)
T ss_dssp SSEEEEEEETTEECCCSSSCTTCGGGSBSCTTSCBCT----------------TSSB--CBTHHHHSHHHHHHHHHHHTT
T ss_pred CceEEEEEECCEEeecCCCcccccCcEEECCCCCcCC----------------CCCc--cchHhhhCHHHHHHHHHHHhh
Confidence 9999999999999999999899999999987643443 6666 699999999999665554211
Q ss_pred HHHhccccCCCCCCCCCCCCCccChhhhhhcccCCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 011505 321 RMAQEAAFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELCNIVATRGARLAAA 400 (484)
Q Consensus 321 ~~~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~i~~~V~~RaA~l~Aa 400 (484)
.. ..+. .+..+..+. ..+ ....+++. ++..+..|..+++++++++|.
T Consensus 206 ----~~-----~~~~-----------~~~~~~~~~-~~~-~~~~v~~~-----------a~~gd~~a~~i~~~~~~~L~~ 252 (326)
T 2qm1_A 206 ----EF-----AGDS-----------ELKQAIDDG-QDV-SSKDVFEF-----------AEKGDHFALMVVDRVCFYLGL 252 (326)
T ss_dssp ----TC-----CSCC-----------HHHHHHHHT-CCC-CHHHHHHH-----------HHTTCHHHHHHHHHHHHHHHH
T ss_pred ----cc-----cccc-----------hhhhccccc-cCC-CHHHHHHH-----------HHcCCHHHHHHHHHHHHHHHH
Confidence 00 0000 010110000 000 12233332 445568999999999999999
Q ss_pred HHHHHHHHhCCCCcCCCCCcceEEEEeceeeccchhHHHHHHHHHHHHhcccCCccEEEEE---cCChhHHHHHHHHH
Q 011505 401 GILGVLKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVIEH---SNDGSGIGAALLAA 475 (484)
Q Consensus 401 ~iaaii~~~~~~~~~~~~~~~~~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~~~~~v~i~~---~~Dgs~iGAAl~Aa 475 (484)
+|+++++.++| ..|.++|++.+..|.|.+.+++.+++...+.....+.|.. .+|++.+|||.++.
T Consensus 253 ~i~~l~~~l~p----------~~IvlgGg~~~~~~~~~~~l~~~l~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~l~~ 320 (326)
T 2qm1_A 253 ATGNLGNTLNP----------DSVVIGGGVSAAGEFLRSRVEKYFQEFTFPQVRNSTKIKLAELGNEAGVIGAASLAL 320 (326)
T ss_dssp HHHHHHHHHCC----------SEEEEEESGGGGTHHHHHHHHHHHHHTSCHHHHTTSEEEECSSGGGHHHHHHHHHGG
T ss_pred HHHHHHHhcCC----------CEEEEcChhhhchHHHHHHHHHHHHHhhhhccCCCcEEEEcCcCchHHHHHHHHHHH
Confidence 99999999998 5799999999999999999999998875432222455554 77889999998864
|
| >3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.5e-27 Score=238.73 Aligned_cols=294 Identities=17% Similarity=0.152 Sum_probs=223.7
Q ss_pred eeEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCceeeee
Q 011505 95 GTYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGF 174 (484)
Q Consensus 95 G~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~lGf 174 (484)
+++|+||+|||++|++++++.|+ ++.+. .++.| .+.+++++.|++.+.+++++. +...+|+
T Consensus 2 ~~~lgiDiGgt~i~~~l~d~~G~---i~~~~--~~~~~-----~~~~~~~~~i~~~i~~~~~~~---------~i~gigi 62 (321)
T 3vgl_A 2 GLTIGVDIGGTKIAAGVVDEEGR---ILSTF--KVATP-----PTAEGIVDAICAAVAGASEGH---------DVEAVGI 62 (321)
T ss_dssp CEEEEEEECSSEEEEEEECTTCC---BCCCE--EEECC-----SSHHHHHHHHHHHHHHHHTTC---------CEEEEEE
T ss_pred cEEEEEEECCCEEEEEEECCCCC---EEEEE--EeeCC-----CCHHHHHHHHHHHHHHHHhhc---------CceEEEE
Confidence 47899999999999999999885 55332 23332 357889999999999987542 3578999
Q ss_pred eeeeeeeeeecCceEE--------ECccHHHHHHHHHHhcCCCceEEEEEechHHHHhccccc----CCCcEEEEEEccC
Q 011505 175 TFSFPVMQTSINTGTL--------VGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRYT----NKDVVAAVILGTG 242 (484)
Q Consensus 175 tFSfPv~q~~~~~G~l--------~G~dv~~~L~~al~r~gl~v~v~alvNDtvatlla~~y~----~~~~~iglIlGTG 242 (484)
+++.|++ .++|++ .+.++.+.|++.+ ++| +.+.||+++..+++.+. +.++.+.+++|||
T Consensus 63 ~~pG~vd---~~~g~v~~~~~l~w~~~~l~~~l~~~~---~~p---v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtG 133 (321)
T 3vgl_A 63 GAAGYVD---DKRATVLFAPNIDWRHEPLKDKVEQRV---GLP---VVVENDANAAAWGEYRFGAGQGHDDVICITLGTG 133 (321)
T ss_dssp EESSEEC---TTSSCEEECSSSCCEEECHHHHHHHHH---CSC---EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS
T ss_pred eccccEe---CCCCEEEeCCCCCCcCCCHHHHHhhhh---CCC---EEEEehhhhHHHHHHHhCCCCCCCCEEEEEeCcc
Confidence 9999998 555554 6788999999999 888 46999999999999874 4688999999999
Q ss_pred cceEEEcccccccCcCCCCCCCCcEEEeCCCCCCCCCCCCCchhhhhhhccCCCCCcceeeeccccccHHHHHHHHHHHH
Q 011505 243 SNAAYVERAQAIPKWHGVPSKSGEMVINMEWGDFRSSHLSLSEYDNALDAESLNPGEQIFEKMISGMYLGEIVRRVLLRM 322 (484)
Q Consensus 243 ~Na~yie~~~~i~k~~~~~~~~g~miIN~EwG~f~~~~lp~T~~D~~lD~~s~npg~q~fEkm~SG~YLgei~R~il~~~ 322 (484)
++++++.+++.+.+.++.++|.|||.++.+.-.| .|++. +|+|.++|+..|-+..+......
T Consensus 134 iG~gii~~G~l~~G~~g~aGEiGh~~v~~~g~~c----------------~cG~~--gclE~~~S~~al~~~~~~~~~~~ 195 (321)
T 3vgl_A 134 LGGGIIIGNKLRRGRFGVAAEFGHIRVVPDGLLC----------------GCGSQ--GCWEQYASGRALVRYAKQRANAT 195 (321)
T ss_dssp EEEEEEETTEECCCTTSCCCCGGGSBSSTTCSBC----------------TTSCB--SBGGGTSSHHHHHHHHHHHHHHC
T ss_pred eEEEEEECCEEecCCCCCCccccceEecCCCCCC----------------CCCCc--CcHHHhcCHHHHHHHHHHHhhcC
Confidence 9999999999999999999999999998763344 37777 59999999999977666544321
Q ss_pred HhccccCCCCCCCCCCCCCccChhhhhhcccCCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011505 323 AQEAAFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELCNIVATRGARLAAAGI 402 (484)
Q Consensus 323 ~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~i~~~V~~RaA~l~Aa~i 402 (484)
... +..+.......... .....+++. ++..+..|..+++++++++|.+|
T Consensus 196 ~~~-------------------~~~~~~~~~~~~~~-~~~~~i~~~-----------a~~gD~~a~~~~~~~~~~La~~i 244 (321)
T 3vgl_A 196 PEN-------------------AAVLLGLGDGSVDG-IEGKHISEA-----------ARQGDPVAVDSFRELARWAGAGL 244 (321)
T ss_dssp GGG-------------------CHHHHHTTTSSSTT-CCHHHHHHH-----------HHTTCHHHHHHHHHHHHHHHHHH
T ss_pred Ccc-------------------hhhhhhcccCcccc-CCHHHHHHH-----------HHcCCHHHHHHHHHHHHHHHHHH
Confidence 000 00000000000000 012333333 45566899999999999999999
Q ss_pred HHHHHHhCCCCcCCCCCcceEEEEeceeeccchhHHHHHHHHHHHHhc-ccCCccEEEEE---cCChhHHHHHHHHH
Q 011505 403 LGVLKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLG-EELFKNIVIEH---SNDGSGIGAALLAA 475 (484)
Q Consensus 403 aaii~~~~~~~~~~~~~~~~~I~vdGsv~~~~p~f~~~l~~~l~~l~~-~~~~~~v~i~~---~~Dgs~iGAAl~Aa 475 (484)
+++++.++| ..|.++|++.+..+.|.+.+++.+++... +.....+.|+. .+|++.+|||.++.
T Consensus 245 ~~l~~~l~p----------~~IvlgGgi~~~~~~l~~~l~~~l~~~~~~~~~~~~~~i~~s~l~~~a~l~GAa~l~~ 311 (321)
T 3vgl_A 245 ADLASLFDP----------SAFIVGGGVSDEGELVLDPIRKSFRRWLIGGEWRPHAQVLAAQLGGKAGLVGAADLAR 311 (321)
T ss_dssp HHHHHHHCC----------SEEEEESGGGGGTHHHHHHHHHHHHHHCTTGGGSCCCEEEECTTGGGHHHHHHHHHHH
T ss_pred HHHHHHhCC----------CEEEEeChhhcchHHHHHHHHHHHHHhcccccccCCCEEEECCCCCcHHHHHHHHHHH
Confidence 999999998 58999999999999999999999998764 33334566665 78999999998764
|
| >1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A | Back alignment and structure |
|---|
Probab=99.95 E-value=4.4e-26 Score=237.66 Aligned_cols=337 Identities=14% Similarity=0.105 Sum_probs=243.4
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHhhcCCCC----CCcceeecccccCCCCCceeeEEEEEeCCceEEEEEEEeCCCc
Q 011505 43 EFEEKCRTPAAKLKQVADAMTVEMHAGLASEGG----SKLKMIISYVDNLPTGDEKGTYYALDLGGTNFRVLRVHLGGKG 118 (484)
Q Consensus 43 ~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~~----s~l~Mlpt~v~~lP~G~E~G~~laiDlGGTnlRv~~V~l~g~~ 118 (484)
++.+.+.++..++..+.++|.+ +||-.+.+ ++----|+.+.--| +.+++|+||+|||++|++++++.|+
T Consensus 35 ~la~~~~ls~~tv~~~v~~L~~---~g~i~~~~~~~~~~~GR~~~~l~~~~---~~~~~lgiDiG~t~i~~~l~d~~G~- 107 (406)
T 1z6r_A 35 DLSRLAQLAPASITKIVHEMLE---AHLVQELEIKEAGNRGRPAVGLVVET---EAWHYLSLRISRGEIFLALRDLSSK- 107 (406)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHH---HTSEEEC-------------CEEECC---TTCEEEEEEEETTEEEEEEEETTCC-
T ss_pred HHHHHHCCCHHHHHHHHHHHHH---CCcEEeecccCCCCCCCCCeEEEEcC---CccEEEEEEEcCCEEEEEEEcCCCC-
Confidence 4555667888888888888866 67743211 11111222222112 4578999999999999999999885
Q ss_pred ceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCceeeeeeeeeeeeeeecCceEE--------
Q 011505 119 VGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGFTFSFPVMQTSINTGTL-------- 190 (484)
Q Consensus 119 ~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~lGftFSfPv~q~~~~~G~l-------- 190 (484)
++.+. .++.| ..+.+++++.+++.|.+++++.+.. ..+...+|+++++|++ .++|++
T Consensus 108 --il~~~--~~~~~----~~~~~~~~~~l~~~i~~~~~~~~~~----~~~i~gigi~~pG~vd---~~~g~v~~~~~l~~ 172 (406)
T 1z6r_A 108 --LVVEE--SQELA----LKDDLPLLDRIISHIDQFFIRHQKK----LERLTSIAITLPGIID---TENGIVHRMPFYED 172 (406)
T ss_dssp --EEEEE--EEECC----SSCSSCHHHHHHHHHHHHHHHTGGG----CCCEEEEEEEESSEEE---TTTTEEEECTTCTT
T ss_pred --EEEEE--EecCC----CCCHHHHHHHHHHHHHHHHHhcCCC----cCceeEEEEEeecCEe---CCCCEEecCCCCCC
Confidence 55432 23433 2357889999999999999876532 1346789999999998 445544
Q ss_pred -ECccHHHHHHHHHHhcCCCceEEEEEechHHHHhccccc----CCCcEEEEEEccCcceEEEcccccccCcCCCCCCCC
Q 011505 191 -VGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRYT----NKDVVAAVILGTGSNAAYVERAQAIPKWHGVPSKSG 265 (484)
Q Consensus 191 -~G~dv~~~L~~al~r~gl~v~v~alvNDtvatlla~~y~----~~~~~iglIlGTG~Na~yie~~~~i~k~~~~~~~~g 265 (484)
.+.++.+.|++.+ ++|| .|.||++++++++.|. +.++.+.+++|||++++++.+++.+.+.++.++|.|
T Consensus 173 w~~~~l~~~l~~~~---~~pv---~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtGiG~giv~~G~l~~G~~g~AGEiG 246 (406)
T 1z6r_A 173 VKEMPLGEALEQHT---GVPV---YIQHDISAWTMAEALFGASRGARDVIQVVIDHNVGAGVITDGHLLHAGSSSLVEIG 246 (406)
T ss_dssp CSSBCHHHHHHHHH---SSCE---EEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSSEEEEEEETTEETTTTSSCCBCGG
T ss_pred ccCCCHHHHHHHHH---CCCE---EEechhHHHHHHHHHhcCCCCCCcEEEEEECCcEEEEEEECCEEeecCCCcCccCC
Confidence 4678999999999 8884 6999999999999864 467899999999999999999999999999899999
Q ss_pred cEEEeCCCCCCCCCCCCCchhhhhhhccCCCCCcceeeeccccccHHHHHHHHHHHHHhccccCCCCCCCCCCCCCccCh
Q 011505 266 EMVINMEWGDFRSSHLSLSEYDNALDAESLNPGEQIFEKMISGMYLGEIVRRVLLRMAQEAAFFGDTVPPKLEVPFALRT 345 (484)
Q Consensus 266 ~miIN~EwG~f~~~~lp~T~~D~~lD~~s~npg~q~fEkm~SG~YLgei~R~il~~~~~~~~lF~~~~~~~l~~~~~l~t 345 (484)
||.++.+...|. |++. +|+|.++|+..|-+.++..+.. .+ +..+
T Consensus 247 h~~v~~~g~~c~----------------cG~~--gclE~~~S~~al~~~~~~~~~~------~~----~~~~-------- 290 (406)
T 1z6r_A 247 HTQVDPYGKRCY----------------CGNH--GCLETIASVDSILELAQLRLNQ------SM----SSML-------- 290 (406)
T ss_dssp GSBSCTTSCBCT----------------TSCB--SBTHHHHSHHHHHHHHHHHHTT------CT----TCGG--------
T ss_pred ceEecCCCCCCC----------------CCCc--cchHHHcCHHHHHHHHHHhhhc------cc----cccc--------
Confidence 999987644553 7776 5999999999986555432100 00 0000
Q ss_pred hhhhhcccCCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCcceEEE
Q 011505 346 PDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELCNIVATRGARLAAAGILGVLKKMGRDAAKDGDKQKTVIA 425 (484)
Q Consensus 346 ~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~i~~~V~~RaA~l~Aa~iaaii~~~~~~~~~~~~~~~~~I~ 425 (484)
..+ .. ....+++. ++..+..|..+++++++++|.+|+++++.++| ..|.
T Consensus 291 ------~~~-~~---~~~~v~~~-----------a~~gD~~a~~~l~~~~~~L~~~i~~l~~~ldP----------~~Iv 339 (406)
T 1z6r_A 291 ------HGQ-PL---TVDSLCQA-----------ALRGDLLAKDIITGVGAHVGRILAIMVNLFNP----------QKIL 339 (406)
T ss_dssp ------GSS-CC---CHHHHHHH-----------HHTTCHHHHHHHHHHHHHHHHHHHHHHHHHCC----------SEEE
T ss_pred ------Ccc-cC---CHHHHHHH-----------HHcCCHHHHHHHHHHHHHHHHHHHHHHHhcCC----------CEEE
Confidence 000 00 12333333 44556889999999999999999999999998 5799
Q ss_pred EeceeeccchhHHHHHHHHHHHHhcccCCccEEEEE---cCChhHHHHHHHH
Q 011505 426 MDGGLYEHYAEYSKCLENTLEELLGEELFKNIVIEH---SNDGSGIGAALLA 474 (484)
Q Consensus 426 vdGsv~~~~p~f~~~l~~~l~~l~~~~~~~~v~i~~---~~Dgs~iGAAl~A 474 (484)
++|++....+.|.+.+++.+++...+.....+.+.. .+|++.+|||++.
T Consensus 340 lgG~i~~~~~~l~~~i~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa~~~ 391 (406)
T 1z6r_A 340 IGSPLSKAADILFPVISDSIRQQALPAYSQHISVESTQFSNQGTMAGAALVK 391 (406)
T ss_dssp EESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSCCCCTTTTHHHHHH
T ss_pred EeCccchhhHHHHHHHHHHHHHhcccccCCCcEEEEeCCCChHHHHHHHHHH
Confidence 999999999999999999998774322122455554 7889999997654
|
| >2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 | Back alignment and structure |
|---|
Probab=99.94 E-value=1.2e-25 Score=232.73 Aligned_cols=317 Identities=13% Similarity=0.144 Sum_probs=235.6
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHhhcCCC---CCCcceeecccccCCCCCceeeEEEEEeCCceEEEEEEEeCCCcc
Q 011505 43 EFEEKCRTPAAKLKQVADAMTVEMHAGLASEG---GSKLKMIISYVDNLPTGDEKGTYYALDLGGTNFRVLRVHLGGKGV 119 (484)
Q Consensus 43 ~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~---~s~l~Mlpt~v~~lP~G~E~G~~laiDlGGTnlRv~~V~l~g~~~ 119 (484)
++.+...++..++..+.+++.+ +||-.+. .|+-=--|+.+.- -.+.+++++||+|||++|++++++.|+
T Consensus 38 ~la~~~gls~~tv~~~v~~L~~---~gli~~~~~~~~~~GR~~~~l~~---~~~~~~~lGIDiGgt~i~~~l~d~~G~-- 109 (380)
T 2hoe_A 38 ELAEELGLTKTTVGEIAKIFLE---KGIVVEEKDSPKGVGRPTKSLKI---SPNCAYVLGIEVTRDEIAACLIDASMN-- 109 (380)
T ss_dssp HHHHHHTCCHHHHHHHHHHHHH---HTSEEEEECCC----CCCEEEEE---CGGGCEEEEEEECSSEEEEEEEETTCC--
T ss_pred HHHHHHCcCHHHHHHHHHHHHH---CCCEEeecCCCCCCCCCceEEEE---ccCCCeEEEEEECCCEEEEEEECCCCC--
Confidence 4455556888888888888766 6773321 1111011111110 124568999999999999999999885
Q ss_pred eeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCceeeeeeeeeeeeeeecCceEE--------E
Q 011505 120 GLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGFTFSFPVMQTSINTGTL--------V 191 (484)
Q Consensus 120 ~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~lGftFSfPv~q~~~~~G~l--------~ 191 (484)
++.+. .++.|.. .+.+++++.+++.|.+++++.+.. ..+...+|++++.|++ ..+|.+ .
T Consensus 110 -vl~~~--~~~~~~~---~~~~~~~~~l~~~i~~~~~~~~~~----~~~i~gigi~~pG~vd---~~~g~v~~~~~l~w~ 176 (380)
T 2hoe_A 110 -ILAHE--AHPLPSQ---SDREETLNVMYRIIDRAKDMMEKL----GSKLSALTVAAPGPID---TERGIIIDPRNFPLS 176 (380)
T ss_dssp -EEEEE--EEECCSS---CCHHHHHHHHHHHHHHHHHHHHHT----TCCCCEEEEEESSCEE---TTTTEECCCSSCTTB
T ss_pred -EEEEE--EEccCCC---CCHHHHHHHHHHHHHHHHHhcCCC----cCcEEEEEEEeeccEE---CCCCEEeccCCCCCc
Confidence 55432 2444432 257889999999999999876432 1346789999999998 445554 6
Q ss_pred CccHHHHHHHHHHhcCCCceEEEEEechHHHHhcccccCC--CcEEEEEEccCcceEEEcccccccCcCCCCCCCCcEEE
Q 011505 192 GRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRYTNK--DVVAAVILGTGSNAAYVERAQAIPKWHGVPSKSGEMVI 269 (484)
Q Consensus 192 G~dv~~~L~~al~r~gl~v~v~alvNDtvatlla~~y~~~--~~~iglIlGTG~Na~yie~~~~i~k~~~~~~~~g~miI 269 (484)
+.++.+.|++.+ ++| +.|.||++++++++.|.+. ++.+.+++|||++++++.+++.+.+.++.++|.|||.+
T Consensus 177 ~~~l~~~l~~~~---~~p---V~v~NDanaaalaE~~~g~~~~~~v~l~~GtGiG~giv~~G~l~~G~~g~aGEiGh~~v 250 (380)
T 2hoe_A 177 QIPLANLLKEKY---GIE---VWVENDADMGAVGEKWYTKRDDSFAWILTGKGIGAGIIIDGELYRGENGYAGEIGYTRV 250 (380)
T ss_dssp TSCHHHHHHHHH---CSE---EEEEEHHHHHHHHHHHHTTCCSCEEEEEESSSCEEEEEETTEECCCSSSCCCCGGGCEE
T ss_pred CCChHHHHHHHh---CCC---EEEechHHHHHHHHHHhCCCCCcEEEEEeCCceEEEEEECCEEeccCCCccccccceEe
Confidence 789999999999 888 4699999999999987644 88999999999999999999999999999999999999
Q ss_pred eCCCCCCCCCCCCCchhhhhhhccCCCCCcceeeeccccccHHHHHHHHHHHHHhccccCCCCCCCCCCCCCccChhhhh
Q 011505 270 NMEWGDFRSSHLSLSEYDNALDAESLNPGEQIFEKMISGMYLGEIVRRVLLRMAQEAAFFGDTVPPKLEVPFALRTPDMS 349 (484)
Q Consensus 270 N~EwG~f~~~~lp~T~~D~~lD~~s~npg~q~fEkm~SG~YLgei~R~il~~~~~~~~lF~~~~~~~l~~~~~l~t~~ls 349 (484)
+.+ -.| .|++. +|+|.++|+..|-+ . .+ .+
T Consensus 251 ~~~-~~c----------------~cG~~--gclE~~~s~~~l~~-----------~-------~~------------~v- 280 (380)
T 2hoe_A 251 FNG-NEY----------------VFLED--VCNENVVLKHVLSM-----------G-------FS------------SL- 280 (380)
T ss_dssp ECS-SSE----------------EEHHH--HHCHHHHHHHHHHH-----------C-------CC-------------T-
T ss_pred cCC-CCC----------------CCCCc--cHHHHHcCHHHHHH-----------H-------HH------------HH-
Confidence 865 222 25554 69999999987743 0 00 00
Q ss_pred hcccCCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCcceEEEEece
Q 011505 350 AMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELCNIVATRGARLAAAGILGVLKKMGRDAAKDGDKQKTVIAMDGG 429 (484)
Q Consensus 350 ~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~i~~~V~~RaA~l~Aa~iaaii~~~~~~~~~~~~~~~~~I~vdGs 429 (484)
++ .++..+..|..+++++++++|.+|+++++.++| ..|.++|+
T Consensus 281 ----------------~~-----------~a~~gD~~a~~~l~~~~~~La~~i~~l~~~ldP----------~~IvlgG~ 323 (380)
T 2hoe_A 281 ----------------AE-----------ARDSGDVRVKEYFDDIARYFSIGLLNLIHLFGI----------SKIVIGGF 323 (380)
T ss_dssp ----------------TH-----------HHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHCC----------CEEEEEEG
T ss_pred ----------------HH-----------HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHhCC----------CEEEEcCc
Confidence 01 133344778899999999999999999999998 57899999
Q ss_pred eeccchhHHHHHHHHHHHHhcccCCccEEEE---EcCChhHHHHHHHHH
Q 011505 430 LYEHYAEYSKCLENTLEELLGEELFKNIVIE---HSNDGSGIGAALLAA 475 (484)
Q Consensus 430 v~~~~p~f~~~l~~~l~~l~~~~~~~~v~i~---~~~Dgs~iGAAl~Aa 475 (484)
+....|.|.+.+++.+++...+. ..+.+. +.+|++.+|||.++.
T Consensus 324 ~~~~~~~l~~~l~~~l~~~~~~~--~~~~i~~s~~~~~a~~~GAa~l~~ 370 (380)
T 2hoe_A 324 FKELGENFLKKIKIEVETHLLYK--HSVDMSFSKVQEPVIAFGAAVHAL 370 (380)
T ss_dssp GGGGHHHHHHHHHHHHHHHCSSS--CCCEEEECCCCSCHHHHHHHHHHH
T ss_pred hhhhhHHHHHHHHHHHHHhcCCC--CCcEEEEcCCCCcHHHHHHHHHHH
Confidence 99888999999999998875432 244554 377889999998864
|
| >3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.94 E-value=8.8e-26 Score=226.74 Aligned_cols=278 Identities=15% Similarity=0.149 Sum_probs=215.6
Q ss_pred eEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCceeeeee
Q 011505 96 TYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGFT 175 (484)
Q Consensus 96 ~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~lGft 175 (484)
++|+||+|||++|++++++++ ++.. .+++.|.. ..+++++.|++.+.+++++.. .+...+|++
T Consensus 2 ~~lgiDiGgt~i~~~l~d~~~----~l~~--~~~~~~~~----~~~~~~~~i~~~i~~~~~~~~-------~~i~gigi~ 64 (302)
T 3vov_A 2 KVVGLDLGGTKIAAGVFDGKR----LLSK--VVVPTPKE----GGERVAEALAEAAERAEREAG-------VRGEAIGLG 64 (302)
T ss_dssp CEEEEEECSSEEEEEEECSSS----BSCC--EEEECCSS----CHHHHHHHHHHHHHHHHHHHT-------CCCSSEEEE
T ss_pred EEEEEEEcCCEEEEEEEeCCC----cEEE--EEEcCCCC----ChHHHHHHHHHHHHHHHhhcc-------CCceEEEEE
Confidence 589999999999999999863 3322 22444432 237899999999999887542 246789999
Q ss_pred eeeeeeeeecCceEE---------ECccHHHHHHHHHHhcCCCceEEEEEechHHHHhccccc----CCCcEEEEEEccC
Q 011505 176 FSFPVMQTSINTGTL---------VGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRYT----NKDVVAAVILGTG 242 (484)
Q Consensus 176 FSfPv~q~~~~~G~l---------~G~dv~~~L~~al~r~gl~v~v~alvNDtvatlla~~y~----~~~~~iglIlGTG 242 (484)
++.|++ .++|++ .+.++.+.|++.+ ++|| .+.||++++.+++.|. +.++.+.+++|||
T Consensus 65 ~pG~vd---~~~g~v~~~~~~~~w~~~~l~~~l~~~~---~~pv---~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtG 135 (302)
T 3vov_A 65 TPGPLD---FRRGVIRFAPNIPGVQDFPIRRILEEAT---GRPV---FLENDANAAALAEHHLGAAQGEESSLYLTVSTG 135 (302)
T ss_dssp ESSCEE---TTTTEEC---CCTTCTTCCHHHHHHHHH---SSCE---EEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS
T ss_pred ecccEe---CCCCEEEcCCCCCCcCCCChHHHHHHhh---CCCE---EEEechHHHHHHHHHhCCCCCCCCEEEEEECCc
Confidence 999998 455555 5678999999999 8884 6999999999999874 4678999999999
Q ss_pred cceEEEcccccccCcCCCCCCCCcEEEeCCCCCCCCCCCCCchhhhhhhccCCCCCcceeeeccccccHHHHHHHHHHHH
Q 011505 243 SNAAYVERAQAIPKWHGVPSKSGEMVINMEWGDFRSSHLSLSEYDNALDAESLNPGEQIFEKMISGMYLGEIVRRVLLRM 322 (484)
Q Consensus 243 ~Na~yie~~~~i~k~~~~~~~~g~miIN~EwG~f~~~~lp~T~~D~~lD~~s~npg~q~fEkm~SG~YLgei~R~il~~~ 322 (484)
++++++.+++.+.+.++.++|.|||.++.+.-.| .|++. +|+|.++|+..|-+..+....
T Consensus 136 iG~gii~~g~l~~G~~g~aGEiGh~~v~~~g~~c----------------~cg~~--gclE~~~s~~~l~~~~~~~~~-- 195 (302)
T 3vov_A 136 IGGGVVLGGRVLRGERGQGGELGHLTLLPGGPAC----------------GCGLE--GCLEALAAGRALERDATYAFQ-- 195 (302)
T ss_dssp EEEEEEETTEECCCTTSCTTCGGGSBSSTTCCBC----------------TTSCB--SBHHHHHSHHHHHHHHHHHHT--
T ss_pred eeEEEEECCEEeeCCCCCCccccceEecCCCCCC----------------CCCCc--chHHHHhCHHHHHHHHHHhhC--
Confidence 9999999999999999999999999998763344 27777 599999999998554443210
Q ss_pred HhccccCCCCCCCCCCCCCccChhhhhhcccCCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011505 323 AQEAAFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELCNIVATRGARLAAAGI 402 (484)
Q Consensus 323 ~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~i~~~V~~RaA~l~Aa~i 402 (484)
. .++ ...+++. ++..+..|..+++++++++|.+|
T Consensus 196 ------------~------~~~-----------------~~~i~~~-----------a~~gd~~a~~~~~~~~~~l~~~i 229 (302)
T 3vov_A 196 ------------R------PVD-----------------TRELFRL-----------FQAGDPKAERLVLQAARYVGIGL 229 (302)
T ss_dssp ------------S------CCC-----------------HHHHHHH-----------HHTTCHHHHHHHHHHHHHHHHHH
T ss_pred ------------C------CCC-----------------HHHHHHH-----------HHcCCHHHHHHHHHHHHHHHHHH
Confidence 0 011 1223322 34455889999999999999999
Q ss_pred HHHHHHhCCCCcCCCCCcceEEEEeceee-ccchhHHHHHHHHHHHHhcccCCccEEEE-EcCChhHHHHHHHHH
Q 011505 403 LGVLKKMGRDAAKDGDKQKTVIAMDGGLY-EHYAEYSKCLENTLEELLGEELFKNIVIE-HSNDGSGIGAALLAA 475 (484)
Q Consensus 403 aaii~~~~~~~~~~~~~~~~~I~vdGsv~-~~~p~f~~~l~~~l~~l~~~~~~~~v~i~-~~~Dgs~iGAAl~Aa 475 (484)
++++..++| ..|.++|++. ...|.|.+.+++.+++...+.....|..- +++|++.+|||.++.
T Consensus 230 ~~l~~~~~p----------~~ivlgG~i~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~~ 294 (302)
T 3vov_A 230 ASLVKAFDP----------GVVVLGGGVALNAPEGYWEALLEAYRRYLQGWEAPPLRRARLGAEAGLLGAALTAY 294 (302)
T ss_dssp HHHHHHHCC----------SEEEEESHHHHTSCHHHHHHHHHHHHHTTTTSCCCCEEECSSGGGHHHHHHHHHHH
T ss_pred HHHHHHHCC----------CEEEEeChhHhhhhHHHHHHHHHHHHHhcchhcCCcEEEcCCCCcHHHHHHHHHHH
Confidence 999999998 5899999999 88999999999999987654333333332 378999999998875
|
| >4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.4e-25 Score=225.96 Aligned_cols=275 Identities=18% Similarity=0.211 Sum_probs=213.3
Q ss_pred eEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCceeeeee
Q 011505 96 TYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGFT 175 (484)
Q Consensus 96 ~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~lGft 175 (484)
++|+||+|||++|++++++.|+ ++.+. +++.|. .+.+++++.|.+.+.++..+.+ ....+|++
T Consensus 25 ~~lgiDiGgt~i~~~l~d~~G~---il~~~--~~~~~~----~~~~~~~~~i~~~i~~~~~~~~--------~~~gigi~ 87 (327)
T 4db3_A 25 MYYGFDVGGTKIEFGAFNEKLE---RVATE--RVPTPT----DDYPLLLETIAGLVAKYDQEFA--------CEGKIGLG 87 (327)
T ss_dssp CEEEEEECSSEEEEEEECTTCC---EEEEE--EEECCT----TCHHHHHHHHHHHHHHHHHHHT--------SCCEEEEE
T ss_pred EEEEEEECCCEEEEEEEeCCCc---EEEEE--EecCCC----CCHHHHHHHHHHHHHHHHHhcC--------CccEEEEE
Confidence 7999999999999999999885 55432 244443 2568899999999888876542 24679999
Q ss_pred eeeeeeeeecCceEE--------ECccHHHHHHHHHHhcCCCceEEEEEechHHHHhccccc----CCCcEEEEEEccCc
Q 011505 176 FSFPVMQTSINTGTL--------VGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRYT----NKDVVAAVILGTGS 243 (484)
Q Consensus 176 FSfPv~q~~~~~G~l--------~G~dv~~~L~~al~r~gl~v~v~alvNDtvatlla~~y~----~~~~~iglIlGTG~ 243 (484)
++.|++ ..+|++ .+.++.+.|++.| ++|| .|.||+++..+++.|. +.++.+.+++|||+
T Consensus 88 ~pG~vd---~~~g~v~~~~~~~~~~~~l~~~l~~~~---~~pV---~v~NDa~aaalgE~~~g~~~~~~~~~~l~~GtGi 158 (327)
T 4db3_A 88 LPGMED---ADDATVLTVNVPAAKGKPLRADLEAKI---GRSV---KIENDANCFALSEAWDEELQDAPSVMGLILGTGF 158 (327)
T ss_dssp ESEEEC---TTTCCEEESSSGGGTTSCHHHHHHHHH---SSCC---EEEEHHHHHHHHHHTSTTTTTCSEEEEEEESSSE
T ss_pred eeccEe---CCCCEEEcCCCccccCCCHHHHHHHHH---CCCE---EEecchhHHHHHHHHhCCCCCCCcEEEEEeCccc
Confidence 999998 445544 5678999999999 8885 6999999999999875 46789999999999
Q ss_pred ceEEEcccccccCcCCCCCCCCcEEEeCC---------CC-CCCCCCCCCchhhhhhhccCCCCCcceeeeccccccHHH
Q 011505 244 NAAYVERAQAIPKWHGVPSKSGEMVINME---------WG-DFRSSHLSLSEYDNALDAESLNPGEQIFEKMISGMYLGE 313 (484)
Q Consensus 244 Na~yie~~~~i~k~~~~~~~~g~miIN~E---------wG-~f~~~~lp~T~~D~~lD~~s~npg~q~fEkm~SG~YLge 313 (484)
+++++.+++.+.+.++.++|.|||.++.. -| .| .|++. +|+|.++|+..|-+
T Consensus 159 G~gii~~G~l~~G~~g~aGEiGh~~v~~~~~~~~~~~~~g~~C----------------~cG~~--gclE~~~S~~al~~ 220 (327)
T 4db3_A 159 GGGLIYEGKVFSGRNNVAGELGHMRLPLDAWFHLGDNAPLLGC----------------GCGKK--GCLDSYLSGRGFEL 220 (327)
T ss_dssp EEEEEETTEECCCTTSCTTCGGGSBCCHHHHHHTCTTCCCCBC----------------TTSCB--SBGGGTSSHHHHHH
T ss_pred eEEEEECCEEeecCCCcCcccccEEeccccccccccccCCCcC----------------CCCCc--chhHhhhCHHHHHH
Confidence 99999999999999999999999999761 12 22 26666 69999999999965
Q ss_pred HHHHHHHHHHhccccCCCCCCCCCCCCCccChhhhhhcccCCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHH
Q 011505 314 IVRRVLLRMAQEAAFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELCNIVATR 393 (484)
Q Consensus 314 i~R~il~~~~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~i~~~V~~R 393 (484)
..+... + + .++ ...+++. ++..+..|..++++
T Consensus 221 ~~~~~~------~--------~------~~~-----------------~~~i~~~-----------a~~gD~~a~~~~~~ 252 (327)
T 4db3_A 221 LYAHYY------G--------E------EKK-----------------AIDIIKA-----------NAAGDEKAAEHVER 252 (327)
T ss_dssp HHHHHH------S--------C------CCC-----------------HHHHHHH-----------HHHTCHHHHHHHHH
T ss_pred HHHHhc------C--------C------CCC-----------------HHHHHHH-----------HHcCCHHHHHHHHH
Confidence 544320 0 0 011 2223332 45566889999999
Q ss_pred HHHHHHHHHHHHHHHhCCCCcCCCCCcceEEEEeceeeccchhHHHHHHHHHHHHhcccCCccEEEEE---cCChhHHHH
Q 011505 394 GARLAAAGILGVLKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVIEH---SNDGSGIGA 470 (484)
Q Consensus 394 aA~l~Aa~iaaii~~~~~~~~~~~~~~~~~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~~~~~v~i~~---~~Dgs~iGA 470 (484)
+++++|.+|++++..++| ..|.++|++... +.|.+.+++.+++.+.+.. ..+.|+. .+|++.+||
T Consensus 253 ~~~~La~~i~~l~~~l~p----------~~IvlgGgi~~~-~~l~~~l~~~l~~~~~~~~-~~~~i~~s~lg~~a~~~GA 320 (327)
T 4db3_A 253 FMELLAICFGNIFTANDP----------HVVALGGGLSNF-ELIYEEMPKRVPKYLLSVA-KCPKIIKAKHGDSGGVRGA 320 (327)
T ss_dssp HHHHHHHHHHHHHHHHCC----------SEEEEESGGGGC-THHHHHHHHHGGGGSCTTC-CCCEEEECSCGGGHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCC----------CEEEEeCcccch-HHHHHHHHHHHHHHhcccc-CCCEEEECCCCCcHHHHHH
Confidence 999999999999999998 589999999875 6788999998887754432 3566664 789999999
Q ss_pred HHHH
Q 011505 471 ALLA 474 (484)
Q Consensus 471 Al~A 474 (484)
|.++
T Consensus 321 a~l~ 324 (327)
T 4db3_A 321 AFLN 324 (327)
T ss_dssp HHTT
T ss_pred HHHH
Confidence 9765
|
| >3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.7e-25 Score=224.85 Aligned_cols=287 Identities=17% Similarity=0.190 Sum_probs=214.9
Q ss_pred CceeeEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCcee
Q 011505 92 DEKGTYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRE 171 (484)
Q Consensus 92 ~E~G~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~ 171 (484)
...+++|+||+|||++|++++++.|+ ++.+. +++.|. ..+.+++++.|.+.|.++++. . .+...
T Consensus 16 ~~~~~~lgidiggt~i~~~l~d~~g~---il~~~--~~~~~~---~~~~~~~~~~i~~~i~~~~~~-~-------~~i~g 79 (321)
T 3r8e_A 16 YFQGMILGIDVGGTSVKFGLVTPEGE---IQNAT--RFMTAD---WVNGIGFVESMKLEIGNFLKQ-Y-------PIVKG 79 (321)
T ss_dssp ---CCEEEEECCSSEEEEEEECTTCC---EEEEE--EEEHHH---HHTTTCHHHHHHHHHHHHHHH-C-------TTCCE
T ss_pred ccCcEEEEEEECCCEEEEEEEcCCCc---EEEEE--EEeCCC---CCCHHHHHHHHHHHHHHHHhc-c-------CCeeE
Confidence 35668999999999999999999875 55432 233332 235788999999999999861 1 34678
Q ss_pred eeeeeeeeeeeeecCceEE---------ECccHHHHHHHHHHhcCCCceEEEEEechHHHHhccccc----CCCcEEEEE
Q 011505 172 LGFTFSFPVMQTSINTGTL---------VGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRYT----NKDVVAAVI 238 (484)
Q Consensus 172 lGftFSfPv~q~~~~~G~l---------~G~dv~~~L~~al~r~gl~v~v~alvNDtvatlla~~y~----~~~~~iglI 238 (484)
+|++++.|++ .++|++ .+.++.+.|++.+. ++| +.|.||+++..+++.+. +.++.+.++
T Consensus 80 igi~~pG~vd---~~~g~v~~~~~l~~w~~~~l~~~l~~~~~--~~p---V~v~NDa~aaalaE~~~g~~~~~~~~v~l~ 151 (321)
T 3r8e_A 80 VGIGWPGLVS---LDRTKVILLPNIPSVVNVPIVEILRSEFP--HIH---FKIENDAKCAALGEYYFGENKRMQTFILLA 151 (321)
T ss_dssp EEEEESSEEC---TTSCCEEEBTTBCCCCSCCHHHHHHHHCT--TSE---EEEEEHHHHHHHHHHHHSTTTTCSSEEEEE
T ss_pred EEEEecccEE---CCCCEEEeCCCCccccCCCHHHHHHHHcC--CCC---EEEEchHHHHHHHHHHhCCCCCCCcEEEEE
Confidence 9999999998 455544 56788888887663 566 56999999999999874 568899999
Q ss_pred EccCcceEEEcccccccCcCCCCCCCCcEEEeCCCCCCCCCCCCCchhhhhhhccCCCCCcceeeeccccccHHHHHHHH
Q 011505 239 LGTGSNAAYVERAQAIPKWHGVPSKSGEMVINMEWGDFRSSHLSLSEYDNALDAESLNPGEQIFEKMISGMYLGEIVRRV 318 (484)
Q Consensus 239 lGTG~Na~yie~~~~i~k~~~~~~~~g~miIN~EwG~f~~~~lp~T~~D~~lD~~s~npg~q~fEkm~SG~YLgei~R~i 318 (484)
+|||++++++.+++.+.+.++.++|.|||. +.+ .+|+|.++|+..|-+..+..
T Consensus 152 ~GtGiG~gii~~G~l~~G~~g~aGEiGh~~-~~~--------------------------~gclE~~~S~~al~~~~~~~ 204 (321)
T 3r8e_A 152 LGTGVGSGVMMNGKLFIGGRGNGTEVGHML-TTR--------------------------GKSLENQVGINHLIAYTHEQ 204 (321)
T ss_dssp ESSSEEEEEEETTEECCCTTSCCCCGGGCB-CTT--------------------------SSBSHHHHSHHHHHHHHHHH
T ss_pred ECCceEEEEEECCEEecCCCCCCccccccc-CCC--------------------------CCcHHHhcCHHHHHHHHHHH
Confidence 999999999999999999888888888887 432 26999999999997666554
Q ss_pred HHHHHhccccCCCCCCCCCCCCCccChhhhhhcccCCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 011505 319 LLRMAQEAAFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELCNIVATRGARLA 398 (484)
Q Consensus 319 l~~~~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~i~~~V~~RaA~l~ 398 (484)
... .. ++.+. +. ..... ....+++. ++..+..|..+++++++++
T Consensus 205 ~~~---~~-------~~~~~---------~~---~~~~~---~~~~i~~~-----------a~~gD~~a~~~~~~~~~~L 248 (321)
T 3r8e_A 205 LAL---DV-------AKKSS---------LH---TIAEL---SPKVIADH-----------AAQGDALALAVWADIGTII 248 (321)
T ss_dssp HHH---CT-------TCCCS---------GG---GCSSC---CHHHHHHH-----------HHTTCHHHHHHHHHHHHHH
T ss_pred hhc---cC-------ccccc---------cc---ccccC---CHHHHHHH-----------HHcCCHHHHHHHHHHHHHH
Confidence 321 10 11110 00 00001 12333333 4455689999999999999
Q ss_pred HHHHHHHHHHhCCCCcCCCCCcceEEEEeceeeccchhHHHHHHHHHHHHhcccCCccEEEEE---cCChhHHHHHHHHH
Q 011505 399 AAGILGVLKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVIEH---SNDGSGIGAALLAA 475 (484)
Q Consensus 399 Aa~iaaii~~~~~~~~~~~~~~~~~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~~~~~v~i~~---~~Dgs~iGAAl~Aa 475 (484)
|.+|+++++.++| ..|.++|++.+..+.|.+.+++.+++...+.....+.|+. .+|++.+|||.++.
T Consensus 249 a~~i~~l~~~ldP----------~~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa~l~~ 318 (321)
T 3r8e_A 249 GESLVNIVRVMDL----------NNILLGGGISGAFDYFVPNLKKAMLEHLPTYYTDDMYIGKATLENDAGLLGAAGLIM 318 (321)
T ss_dssp HHHHHHHHHHHCC----------CEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSSGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCC----------CEEEEeChhcccchHHHHHHHHHHHHhcccccCCCCEEEEcCCCCcHHHHHHHHHHH
Confidence 9999999999998 6899999999989999999999999876543233566665 67889999998873
|
| >2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A | Back alignment and structure |
|---|
Probab=99.93 E-value=2.3e-24 Score=219.61 Aligned_cols=295 Identities=18% Similarity=0.195 Sum_probs=214.2
Q ss_pred ceeeEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCceee
Q 011505 93 EKGTYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQREL 172 (484)
Q Consensus 93 E~G~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~l 172 (484)
+..++|+||+|||++|++++++.|+ ++.+. ..+.| .+.+++++.|.+.+.+++++.... ..+...+
T Consensus 28 ~~~~~lgiDiGgt~i~~~l~d~~G~---il~~~--~~~~~-----~~~~~~~~~i~~~i~~~~~~~~~~----~~~i~gi 93 (343)
T 2yhw_A 28 GTLSALAVDLGGTNLRVAIVSMKGE---IVKKY--TQFNP-----KTYEERINLILQMCVEAAAEAVKL----NCRILGV 93 (343)
T ss_dssp CEEEEEEEEECSSEEEEEEEETTSC---EEEEE--EEECC-----SSHHHHHHHHHHHHHHHHHHHHHT----TEEEEEE
T ss_pred CCcEEEEEEECCCEEEEEEECCCCc---EEEEE--EEcCC-----CCHHHHHHHHHHHHHHHHHhcccc----cCceEEE
Confidence 3468999999999999999999885 55432 23333 245788899999999988764321 1235778
Q ss_pred eeeeeeeeeeeecCceEE----------ECccHHHHHHHHHHhcCCCceEEEEEechHHHHhccccc----CCCcEEEEE
Q 011505 173 GFTFSFPVMQTSINTGTL----------VGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRYT----NKDVVAAVI 238 (484)
Q Consensus 173 GftFSfPv~q~~~~~G~l----------~G~dv~~~L~~al~r~gl~v~v~alvNDtvatlla~~y~----~~~~~iglI 238 (484)
|++++.|++ .++|.+ .+.++.+.|++.+ ++|| .|.||++++++++.+. +.++.+.++
T Consensus 94 gi~~pG~vd---~~~g~v~~~~~~~~~w~~~~l~~~l~~~~---~~pv---~v~NDa~aaal~E~~~g~~~~~~~~v~i~ 164 (343)
T 2yhw_A 94 GISTGGRVN---PREGIVLHSTKLIQEWNSVDLRTPLSDTL---HLPV---WVDNDGNCAALAERKFGQGKGLENFVTLI 164 (343)
T ss_dssp EEEESSEEE---TTTTEEEECCTTSSSCSSEECHHHHHHHH---CSCE---EEEEHHHHHHHHHHHTSTTTTCSCEEEEE
T ss_pred EEecccCEe---CCCCEEEeCCcCCCCCcCCCHHHHHHHHH---CCCE---EEechhHHHHHHHHHhCCCCCCCcEEEEE
Confidence 999999998 344433 3467899999998 8884 6999999999999864 457899999
Q ss_pred EccCcceEEEcccccccCcCCCCCCCCcEEEeCCCCCCCCCCCCCchhhhhhhccCCCCCcceeeeccccccHHHHHHHH
Q 011505 239 LGTGSNAAYVERAQAIPKWHGVPSKSGEMVINMEWGDFRSSHLSLSEYDNALDAESLNPGEQIFEKMISGMYLGEIVRRV 318 (484)
Q Consensus 239 lGTG~Na~yie~~~~i~k~~~~~~~~g~miIN~EwG~f~~~~lp~T~~D~~lD~~s~npg~q~fEkm~SG~YLgei~R~i 318 (484)
+|||++++++.+++.+.+.++.++|.|||.++.++..|. |++. +|+|.++|+..|-+.++..
T Consensus 165 ~GtGiG~gii~~G~l~~G~~g~aGEiGh~~~~~~g~~c~----------------cG~~--gclE~~~s~~al~~~~~~~ 226 (343)
T 2yhw_A 165 TGTGIGGGIIHQHELIHGSSFCAAELGHLVVSLXGPDCS----------------CGSH--GCIEAYASGMALQREAKKL 226 (343)
T ss_dssp ESSSEEEEEEETTEECCCTTSCTTCGGGCBCCC--CBCT----------------TSCB--SBHHHHHSHHHHHHHHHHH
T ss_pred ECCCEEEEEEECCEEecCCCCcccccCCEEEccCCCcCC----------------CCCC--CcHHHhcCHHHHHHHHHHh
Confidence 999999999999999999888899999999986644553 7776 5999999999996665543
Q ss_pred HHHHHhccccCCCCCCCCCCCCCccChhhhhhcccCCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 011505 319 LLRMAQEAAFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELCNIVATRGARLA 398 (484)
Q Consensus 319 l~~~~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~i~~~V~~RaA~l~ 398 (484)
.. .. +..+.. ... ..++ .. ....+++. ++..+..|..+++++++++
T Consensus 227 ~~----~~-------~~~~~~-~~~--------~~~~--~~-~~~~v~~~-----------a~~gd~~a~~il~~~~~~L 272 (343)
T 2yhw_A 227 HD----ED-------LLLVEG-MSV--------PKDE--AV-GALHLIQA-----------AKLGNAKAQSILRTAGTAL 272 (343)
T ss_dssp HH----TT-------CSCCTT-CCC--------------CC-CHHHHHHH-----------HHTTCHHHHHHHHHHHHHH
T ss_pred hc----cc-------cccccc-ccc--------cccc--cC-CHHHHHHH-----------HHcCCHHHHHHHHHHHHHH
Confidence 21 11 000000 000 0000 00 12333333 4556688999999999999
Q ss_pred HHHHHHHHHHhCCCCcCCCCCcceEEEEeceeeccchhHHHHHHHHHHHHhcccCCccEEEEE--cCChhHHHHHHHHHH
Q 011505 399 AAGILGVLKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVIEH--SNDGSGIGAALLAAS 476 (484)
Q Consensus 399 Aa~iaaii~~~~~~~~~~~~~~~~~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~~~~~v~i~~--~~Dgs~iGAAl~Aa~ 476 (484)
|.+|+++++.++| ..|.++|++. +.|.+.+++.+++...+. ...+.++. ..|.+.+|||.++.-
T Consensus 273 a~~i~~l~~~l~P----------~~IvlgG~i~---~~~~~~l~~~l~~~~~~~-~~~~~i~~s~~~~~~~~GAa~l~~~ 338 (343)
T 2yhw_A 273 GLGVVNILHTMNP----------SLVILSGVLA---SHYIHIVKDVIRQQALSS-VQDVDVVVSDLVDPALLGAASMVLD 338 (343)
T ss_dssp HHHHHHHHHHTCC----------SEEEEESTTH---HHHHHHHHHHHHHHSCGG-GTTCEEEECCCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCC----------CEEEEeCCcH---HHHHHHHHHHHHHhcccc-cCCcEEEEccCCCchHHHHHHHHHH
Confidence 9999999999998 5788999996 578899998888764432 23455554 357789999988753
|
| >2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10 | Back alignment and structure |
|---|
Probab=99.93 E-value=6.2e-25 Score=222.28 Aligned_cols=276 Identities=20% Similarity=0.221 Sum_probs=207.4
Q ss_pred eeEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCceeeee
Q 011505 95 GTYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGF 174 (484)
Q Consensus 95 G~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~lGf 174 (484)
+++|+||+|||++|++++++.|+ ++.+. +++.+. .+.+++++.|.+.+.++..+.+ ....+|+
T Consensus 24 ~~~lgiDiGgt~i~~~l~d~~g~---il~~~--~~~~~~----~~~~~~~~~i~~~i~~~~~~~~--------~i~~igi 86 (327)
T 2ap1_A 24 AMYYGFDIGGTKIALGVFDSTRR---LQWEK--RVPTPH----TSYSAFLDAVCELVEEADQRFG--------VKGSVGI 86 (327)
T ss_dssp CEEEEEEECSSEEEEEEEETTCC---EEEEE--EEECCC----SCHHHHHHHHHHHHHHHHHHHT--------SCCEEEE
T ss_pred ceEEEEEECCCEEEEEEEeCCCC---EEEEE--EecCCC----CCHHHHHHHHHHHHHHHHHhcC--------CccEEEE
Confidence 47999999999999999999885 55432 244332 1467888888888888775432 2466999
Q ss_pred eeeeeeeeeecCceEE--------ECccHHHHHHHHHHhcCCCceEEEEEechHHHHhccccc----CCCcEEEEEEccC
Q 011505 175 TFSFPVMQTSINTGTL--------VGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRYT----NKDVVAAVILGTG 242 (484)
Q Consensus 175 tFSfPv~q~~~~~G~l--------~G~dv~~~L~~al~r~gl~v~v~alvNDtvatlla~~y~----~~~~~iglIlGTG 242 (484)
.++.|++. .+|++ .+.++.+.|++.+ ++| +.|.||++++++++.+. +.++.+.+++|||
T Consensus 87 ~~pG~vd~---~~g~v~~~~~~~~~~~~l~~~l~~~~---~~p---v~v~NDa~aaalgE~~~g~~~~~~~~v~l~~GtG 157 (327)
T 2ap1_A 87 GIPGMPET---EDGTLYAANVPAASGKPLRADLSARL---DRD---VRLDNDANCFALSEAWDDEFTQYPLVMGLILGTG 157 (327)
T ss_dssp EESSBSCC---TTSCCBCTTCTTTTTSCHHHHHHHHH---TSC---EEEEEHHHHHHHHHHTSTTGGGCSEEEEEEESSS
T ss_pred EeeeeEEC---CCCEEEccCCCccCCCChHHHHHHHH---CCC---EEEecHHHHHHHHHHHhCcCCCCCcEEEEEECCc
Confidence 99999983 33433 5678999999998 888 46999999999999865 4678999999999
Q ss_pred cceEEEcccccccCcCCCCCCCCcEEEeCCC---------C-CCCCCCCCCchhhhhhhccCCCCCcceeeeccccccHH
Q 011505 243 SNAAYVERAQAIPKWHGVPSKSGEMVINMEW---------G-DFRSSHLSLSEYDNALDAESLNPGEQIFEKMISGMYLG 312 (484)
Q Consensus 243 ~Na~yie~~~~i~k~~~~~~~~g~miIN~Ew---------G-~f~~~~lp~T~~D~~lD~~s~npg~q~fEkm~SG~YLg 312 (484)
++++++.+++.+.+.++.+++.|||.++..+ | .| .|+++ +|+|.++|+..|-
T Consensus 158 iG~giv~~G~l~~G~~g~aGE~Gh~~~~~~~~~~~~~~~~g~~c----------------~cG~~--gcle~~~s~~~l~ 219 (327)
T 2ap1_A 158 VGGGLVLNGKPITGQSYITGEFGHMRLPVDALTLMGFDFPLRRC----------------GCGQM--GCIENYLSGRGFA 219 (327)
T ss_dssp EEEEEEETTEEECCTTSCTTCGGGSBCCHHHHHHHCTTSCCCBC----------------TTSCB--SBTHHHHSHHHHH
T ss_pred EEEEEEECCEEeecCCCcccccccEEEecCcccccccccCCCcC----------------CCCch--hhHHHHhCHHHHH
Confidence 9999999999999988888999999987652 2 12 36666 6999999999885
Q ss_pred HHHHHHHHHHHhccccCCCCCCCCCCCCCccChhhhhhcccCCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHH
Q 011505 313 EIVRRVLLRMAQEAAFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELCNIVAT 392 (484)
Q Consensus 313 ei~R~il~~~~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~i~~~V~~ 392 (484)
+..+... + .. .+ ...+++. ++..+..|..+++
T Consensus 220 ~~~~~~~------~--------~~------~~-----------------~~~i~~~-----------a~~gd~~a~~il~ 251 (327)
T 2ap1_A 220 WLYQHYY------D--------QS------LQ-----------------APEIIAL-----------WEQGDEQAHAHVE 251 (327)
T ss_dssp HHHHHHH------C--------CC------CC-----------------HHHHHHH-----------HHTTCHHHHHHHH
T ss_pred HHHHHhc------C--------CC------CC-----------------HHHHHHH-----------HHcCCHHHHHHHH
Confidence 5433210 0 00 01 1223332 4445588999999
Q ss_pred HHHHHHHHHHHHHHHHhCCCCcCCCCCcceEEEEeceeeccchhHHHHHHHHHHHHhcccCCccEEEEE---cCChhHHH
Q 011505 393 RGARLAAAGILGVLKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVIEH---SNDGSGIG 469 (484)
Q Consensus 393 RaA~l~Aa~iaaii~~~~~~~~~~~~~~~~~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~~~~~v~i~~---~~Dgs~iG 469 (484)
++++++|.+|++++..++| ..|.++|++....+.|.+ +++.+++.+.+ ....+.|+. .++++.+|
T Consensus 252 ~~~~~La~~i~~l~~~l~p----------~~IvlgG~i~~~~~~~~~-l~~~l~~~~~~-~~~~~~i~~s~~~~~a~~~G 319 (327)
T 2ap1_A 252 RYLDLLAVCLGNILTIVDP----------DLLVIGGGLSNFTAITTQ-LAERLPRHLLP-VARAPRIERARHGDAGGMRG 319 (327)
T ss_dssp HHHHHHHHHHHHHHHHHCC----------SEEEEESGGGGSTHHHHS-SGGGSGGGSCT-TCCCCEEEECSCTTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCC----------CEEEEeChhhcchhHHHH-HHHHHHHhhcc-ccCCCEEEEcCCCCcHHHHH
Confidence 9999999999999999998 469999999988765554 88877766543 234566665 67899999
Q ss_pred HHHHH
Q 011505 470 AALLA 474 (484)
Q Consensus 470 AAl~A 474 (484)
||.++
T Consensus 320 Aa~la 324 (327)
T 2ap1_A 320 AAFLH 324 (327)
T ss_dssp HHHTT
T ss_pred HHHHH
Confidence 99875
|
| >4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.7e-24 Score=215.29 Aligned_cols=271 Identities=17% Similarity=0.198 Sum_probs=202.2
Q ss_pred eEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCceeeeee
Q 011505 96 TYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGFT 175 (484)
Q Consensus 96 ~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~lGft 175 (484)
+++++|+|||++|++++++.|+ ++.+. +++.|. .+.+++++.+. +++++. .+...+|++
T Consensus 5 ~~lgiDiGgt~i~~~l~d~~G~---il~~~--~~~~~~----~~~~~~~~~i~----~~~~~~--------~~i~gigi~ 63 (297)
T 4htl_A 5 KIAAFDIGGTALKMGVVLPHGE---IILTK--SAEISG----SDGDQILAEMK----VFLAEN--------TDVTGIAVS 63 (297)
T ss_dssp CEEEEEECSSEEEEEEECTTSC---EEEEE--EEECST----TCHHHHHHHHH----HHHHTC--------TTCCEEEEE
T ss_pred EEEEEEeCCCeEEEEEECCCCC---EEEEE--EecCCC----CCHHHHHHHHH----HHHhhc--------CCeeEEEEe
Confidence 7899999999999999999885 55432 244432 23355555544 444332 236789999
Q ss_pred eeeeeeeeecCceEE---------ECccHHHHHHHHHHhcCCCceEEEEEechHHHHhccccc----CCCcEEEEEEccC
Q 011505 176 FSFPVMQTSINTGTL---------VGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRYT----NKDVVAAVILGTG 242 (484)
Q Consensus 176 FSfPv~q~~~~~G~l---------~G~dv~~~L~~al~r~gl~v~v~alvNDtvatlla~~y~----~~~~~iglIlGTG 242 (484)
++.|++ ..+|++ .+.++.+.|++.+ ++| +.+.||+++..+++.|. +.++.+.+++|||
T Consensus 64 ~pG~vd---~~~g~v~~~~~l~~w~~~~l~~~l~~~~---~~p---V~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtG 134 (297)
T 4htl_A 64 APGYVN---PKTGLITMGGAIRRFDNFNLKEWLEAET---GLP---VAIENDANCALLAEKWLGKGQDLDDFLCLTIGTG 134 (297)
T ss_dssp ESSEEC---TTTCEEEECTTCGGGTTEEHHHHHHHHH---CSC---EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS
T ss_pred cCccee---CCCCEEEeCCCCCCccCCCHHHHHHHHH---CcC---EEEecHHHHHHHHHHHhCCCCCCCcEEEEEECcc
Confidence 999998 555655 4668999999999 898 46999999999999874 5688999999999
Q ss_pred cceEEEcccccccCcCCCCCCCCcEEEeCCCCCCCCCCCCCchhhhhhhccCCCCCcceeeeccccccHHHHHHHHHHHH
Q 011505 243 SNAAYVERAQAIPKWHGVPSKSGEMVINMEWGDFRSSHLSLSEYDNALDAESLNPGEQIFEKMISGMYLGEIVRRVLLRM 322 (484)
Q Consensus 243 ~Na~yie~~~~i~k~~~~~~~~g~miIN~EwG~f~~~~lp~T~~D~~lD~~s~npg~q~fEkm~SG~YLgei~R~il~~~ 322 (484)
++++++.+++.+.+.++.++|.|||+++...+. .++..|+|.++|+..|-+..+...
T Consensus 135 iG~giv~~G~l~~G~~g~aGEiGh~~~~~~~~~--------------------~~~~~~le~~~s~~~l~~~~~~~~--- 191 (297)
T 4htl_A 135 IGGGIFSNGELVRGGRFRAGEFGYMFSERPGAF--------------------RPGKYTLNETTTMLVLRRQYAELT--- 191 (297)
T ss_dssp EEEEEEETTEECCCTTSCCCCGGGSBSSCCCSS--------------------CGGGGBHHHHSSHHHHHHHHHHHH---
T ss_pred eEEEEEECCEEEecCCCCcccccceEecCCCCc--------------------CcccCcHHHhccHHHHHHHHHHHh---
Confidence 999999999999999999999999998754221 124579999999999855443211
Q ss_pred HhccccCCCCCCCCCCCCCccChhhhhhcccCCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011505 323 AQEAAFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELCNIVATRGARLAAAGI 402 (484)
Q Consensus 323 ~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~i~~~V~~RaA~l~Aa~i 402 (484)
+ .+. ..++ ...+++. ++..+..|..+++++++++|.+|
T Consensus 192 ---~------~~~-----~~~~-----------------~~~i~~~-----------a~~gd~~a~~~~~~~~~~La~~i 229 (297)
T 4htl_A 192 ---G------RPL-----EEIT-----------------GEEIFAN-----------YDAHDAVSERLITEFYTGICTGL 229 (297)
T ss_dssp ---C------CCG-----GGCC-----------------HHHHHHH-----------HHTTCHHHHHHHHHHHHHHHHHH
T ss_pred ---c------CCc-----cCCC-----------------HHHHHHH-----------HHcCCHHHHHHHHHHHHHHHHHH
Confidence 0 000 0011 2223332 44556889999999999999999
Q ss_pred HHHHHHhCCCCcCCCCCcceEEEEeceeeccchhHHHHHHHHHHHHhcccCCccEEEEE---cCChhHHHHHHHHHH
Q 011505 403 LGVLKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVIEH---SNDGSGIGAALLAAS 476 (484)
Q Consensus 403 aaii~~~~~~~~~~~~~~~~~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~~~~~v~i~~---~~Dgs~iGAAl~Aa~ 476 (484)
+++++.++| ..|.++|++.+. +.|.+.+++.+++... ..+.|+. ++|++.+|||.++.-
T Consensus 230 ~~l~~~~~p----------~~IvlgGgi~~~-~~~~~~l~~~l~~~~~----~~~~i~~s~lg~~a~~~GAa~l~~~ 291 (297)
T 4htl_A 230 YNLIYLFDP----------THIFIGGGITSR-PTFIAELKHHMESFGL----RDTIIETATHKNQAGLLGAVYHFLQ 291 (297)
T ss_dssp HHHHHHHCC----------SEEEEESGGGGS-TTHHHHHHHHHTTTCC----TTCEEEECSCTTTHHHHHHHHHHHH
T ss_pred HHHHHHhCC----------CEEEEeCccccc-HHHHHHHHHHHHHhcc----CCCeEEECCcCChHHHHhHHHHHHH
Confidence 999999998 589999999975 7899999998875432 2445553 789999999988753
|
| >3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=99.92 E-value=4.9e-24 Score=214.87 Aligned_cols=276 Identities=18% Similarity=0.189 Sum_probs=184.7
Q ss_pred ceeeEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCceee
Q 011505 93 EKGTYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQREL 172 (484)
Q Consensus 93 E~G~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~l 172 (484)
+.+++|+||+|||++|++++++.|+ ++.+. +.+.|. ...+++++.|.+.+.+++++.+. +...+
T Consensus 5 ~~~~~lgiDiGgt~i~~~l~d~~G~---il~~~--~~~~~~----~~~~~~~~~i~~~i~~~~~~~~~-------~i~gi 68 (310)
T 3htv_A 5 QHNVVAGVDMGATHIRFCLRTAEGE---TLHCE--KKRTAE----VIAPGLVSGIGEMIDEQLRRFNA-------RCHGL 68 (310)
T ss_dssp CEEEEEEEEECSSEEEEEEEETTSC---EEEEE--EEEHHH----HHTTCHHHHHHHHHHHHHHHHTE-------EEEEE
T ss_pred CCCEEEEEEeCCCEEEEEEECCCCC---EEEEE--EecCcc----ccHHHHHHHHHHHHHHHHHhcCC-------CeeEE
Confidence 5678999999999999999999885 55432 233332 12567888899888888766432 25778
Q ss_pred eeeeeeeeeeeecCceEE--------E---CccHHHHHHHHHHhcCCCceEEEEEechHHHHhcccc---cCCCcEEEEE
Q 011505 173 GFTFSFPVMQTSINTGTL--------V---GRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRY---TNKDVVAAVI 238 (484)
Q Consensus 173 GftFSfPv~q~~~~~G~l--------~---G~dv~~~L~~al~r~gl~v~v~alvNDtvatlla~~y---~~~~~~iglI 238 (484)
|++.+.|++ .++|++ . +.++.+.|++.+ ++|| .+.||+++.++++.+ .+.++.+.++
T Consensus 69 gi~~pG~vd---~~~g~v~~~~~l~~~~~~~~~l~~~l~~~~---~~pv---~v~NDanaaa~~e~~~~~~~~~~~~~v~ 139 (310)
T 3htv_A 69 VMGFPALVS---KDKRTIISTPNLPLTAADLYDLADKLENTL---NCPV---EFSRDVNLQLSWDVVENRLTQQLVLAAY 139 (310)
T ss_dssp EEEESSCBC---TTSSCBCSCCSSSCCHHHHTTHHHHHHHHH---TSCE---EEEEHHHHHHHHHHHHTTCTTSCEEEEE
T ss_pred EEeccccEe---CCCCEEEeCCCCCCccccCccHHHHHHHHh---CCCE---EEeeHHHHHHHHHHhhcccCCceEEEEE
Confidence 999999998 444544 1 257889999988 8884 699999999876643 2457899999
Q ss_pred EccCcceEEEcccccccCcCCCCCCCCcEEEeCCCCCCCCCCCCCchhhhhhhccCCCCCcceeeeccccccHHHHHHHH
Q 011505 239 LGTGSNAAYVERAQAIPKWHGVPSKSGEMVINMEWGDFRSSHLSLSEYDNALDAESLNPGEQIFEKMISGMYLGEIVRRV 318 (484)
Q Consensus 239 lGTG~Na~yie~~~~i~k~~~~~~~~g~miIN~EwG~f~~~~lp~T~~D~~lD~~s~npg~q~fEkm~SG~YLgei~R~i 318 (484)
+|||++++++.+++.+.+.++.++|.|||.|+.+...|. |++. +|+|.++|+..|-+..+.
T Consensus 140 ~GtGiG~gii~~G~l~~G~~g~aGEiGh~~v~~~g~~C~----------------cG~~--GclE~~~S~~al~~~~~~- 200 (310)
T 3htv_A 140 LGTGMGFAVWMNGAPWTGAHGVAGELGHIPLGDMTQHCA----------------CGNP--GCLETNCSGMALRRWYEQ- 200 (310)
T ss_dssp ESSSEEEEEEETTEEECCSSSCCCC---------------------------------------CCSSSHHHHHHHHTT-
T ss_pred eceeEEEEEEECCEEeecCCCCceeCcceEeCCCCCcCC----------------CCCC--ceehhhhCHHHHHHHHHh-
Confidence 999999999999999999999999999999986533443 7777 699999999988432110
Q ss_pred HHHHHhccccCCCCCCCCCCCCCccChhhhhhcccCCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 011505 319 LLRMAQEAAFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELCNIVATRGARLA 398 (484)
Q Consensus 319 l~~~~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~i~~~V~~RaA~l~ 398 (484)
. .+ .++.+.+ ++. .. .+++++.++++.
T Consensus 201 ------~--------~~------~~~~~~~-----------------~~~-~~-----------~d~~~~~~~~~~---- 227 (310)
T 3htv_A 201 ------Q--------PR------NYPLRDL-----------------FVH-AE-----------NAPFVQSLLENA---- 227 (310)
T ss_dssp ------S--------CC------SSCGGGH-----------------HHH-HT-----------TCHHHHHHHHHH----
T ss_pred ------c--------cC------CCCHHHH-----------------HHH-Hc-----------CChHHHHHHHHH----
Confidence 0 00 0111111 111 00 123444555554
Q ss_pred HHHHHHHHHHhCCCCcCCCCCcceEEEEeceeeccchhHHHHHHHHHHHHhc-ccCCccEEEEE---cCChhHHHHHHHH
Q 011505 399 AAGILGVLKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLG-EELFKNIVIEH---SNDGSGIGAALLA 474 (484)
Q Consensus 399 Aa~iaaii~~~~~~~~~~~~~~~~~I~vdGsv~~~~p~f~~~l~~~l~~l~~-~~~~~~v~i~~---~~Dgs~iGAAl~A 474 (484)
|.+|+++++.++| ..|.++|++.+..+.|.+.+.+.+++.+. +.....++|+. ++|++.+|||.++
T Consensus 228 a~~la~l~~~~dP----------~~IvlgG~v~~~~~~~~~~l~~~l~~~~~~~~~~~~~~i~~s~lg~~ag~~GAa~la 297 (310)
T 3htv_A 228 ARAIATSINLFDP----------DAVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAILA 297 (310)
T ss_dssp HHHHHHHHHHHCC----------SEEEEECTTTTSTTCCHHHHHHHHHHTSCTTTTTTTCEEEECCCCTTHHHHHHHHHH
T ss_pred HHHHHHHHHhhCC----------CEEEEeCchhccchhHHHHHHHHHHHHhhcccccCCcEEEEcCCCCcHHHHHHHHHH
Confidence 4467888999998 68999999999988889999998888763 21223566765 7899999999887
Q ss_pred H
Q 011505 475 A 475 (484)
Q Consensus 475 a 475 (484)
.
T Consensus 298 ~ 298 (310)
T 3htv_A 298 H 298 (310)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10 | Back alignment and structure |
|---|
Probab=99.92 E-value=9.3e-25 Score=216.97 Aligned_cols=270 Identities=17% Similarity=0.167 Sum_probs=203.2
Q ss_pred eEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCceeeeee
Q 011505 96 TYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGFT 175 (484)
Q Consensus 96 ~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~lGft 175 (484)
++|+||+|||++|++++++.|+ ++.+. +++.+.. .+.+++++.|.+.+.+++++ ...+|+.
T Consensus 2 ~~lgidiggt~~~~~l~d~~g~---il~~~--~~~~~~~---~~~~~~~~~i~~~i~~~~~~-----------~~~igi~ 62 (289)
T 2aa4_A 2 TTLAIDIGGTKLAAALIGADGQ---IRDRR--ELPTPAS---QTPEALRDALSALVSPLQAH-----------AQRVAIA 62 (289)
T ss_dssp CEEEEEECSSEEEEEEECTTCC---EEEEE--EEECCSS---CCHHHHHHHHHHHHTTTGGG-----------CSEEEEE
T ss_pred eEEEEEeCCCEEEEEEECCCCC---EEEEE--EecCCCC---CCHHHHHHHHHHHHHHHHhh-----------CCEEEEE
Confidence 4799999999999999999875 55432 2443321 24677888887777666432 2359999
Q ss_pred eeeeeeeeecCceEE---------ECccHHHHHHHHHHhcCCCceEEEEEechHHHHhcccccCCC---cEEEEEEccCc
Q 011505 176 FSFPVMQTSINTGTL---------VGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRYTNKD---VVAAVILGTGS 243 (484)
Q Consensus 176 FSfPv~q~~~~~G~l---------~G~dv~~~L~~al~r~gl~v~v~alvNDtvatlla~~y~~~~---~~iglIlGTG~ 243 (484)
++.|++ .++|++ .+.++.+.|++.+ ++| +.+.||++++++++.+.... +.+.+++|||+
T Consensus 63 ~pG~vd---~~~g~v~~~~~~~~w~~~~l~~~l~~~~---~~p---v~v~NDa~aaa~~e~~~g~~~~~~~v~l~~GtGi 133 (289)
T 2aa4_A 63 STGIIR---DGSLLALNPHNLGGLLHFPLVKTLEQLT---NLP---TIAINDAQAAAWAEFQALDGDITDMVFITVSTGV 133 (289)
T ss_dssp ESSEEE---TTEEECSSGGGGGGGTTCCHHHHHHHHH---CSC---EEEEEHHHHHHHHHHHTSCTTCCCEEEEEESSSE
T ss_pred ecccee---CCCCEEEeCCCCCcccCCChHHHHHHHH---CCC---EEEechHHHHHHHHHHhCCCCCceEEEEEeCccE
Confidence 999998 444443 5678999999998 888 46999999999999865321 89999999999
Q ss_pred ceEEEcccccccCcCCCCCCCCcEEEeCCCCCCCCCCCCCchhhhhhhccCCCCCcceeeeccccccHHHHHHHHHHHHH
Q 011505 244 NAAYVERAQAIPKWHGVPSKSGEMVINMEWGDFRSSHLSLSEYDNALDAESLNPGEQIFEKMISGMYLGEIVRRVLLRMA 323 (484)
Q Consensus 244 Na~yie~~~~i~k~~~~~~~~g~miIN~EwG~f~~~~lp~T~~D~~lD~~s~npg~q~fEkm~SG~YLgei~R~il~~~~ 323 (484)
+++++.+++.+.+.++.+++.|||.++..+..|. |++. +|+|.++|+..|-+..+.
T Consensus 134 G~gii~~G~l~~G~~g~aGE~Gh~~~~~~g~~c~----------------cG~~--gcle~~~s~~~l~~~~~~------ 189 (289)
T 2aa4_A 134 GGGVVSGCKLLTGPGGLAGHIGHTLADPHGPVCG----------------CGRT--GCVEAIASGRGIAAAAQG------ 189 (289)
T ss_dssp EEEEEETTEEECCTTSCCCCGGGSBSCTTSCBCT----------------TSCB--SBHHHHHSHHHHHHTCCG------
T ss_pred EEEEEECCEEeeCCCCCCccCCcEEECCCCCcCC----------------CCCc--hhHHHHhCHHHHHHHHHH------
Confidence 9999999999999998899999999987655553 6776 599999999876321110
Q ss_pred hccccCCCCCCCCCCCCCccChhhhhhcccCCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011505 324 QEAAFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELCNIVATRGARLAAAGIL 403 (484)
Q Consensus 324 ~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~i~~~V~~RaA~l~Aa~ia 403 (484)
.+ + + . ....+++. ++..+..|..+++++++.+|.+|+
T Consensus 190 -~~-------~-------------------~--~---~~~~v~~~-----------a~~gd~~a~~i~~~~~~~L~~~i~ 226 (289)
T 2aa4_A 190 -EL-------A-------------------G--A---DAKTIFTR-----------AGQGDEQAQQLIHRSARTLARLIA 226 (289)
T ss_dssp -GG-------T-------------------T--C---CHHHHHHH-----------HHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred -hc-------c-------------------C--C---CHHHHHHH-----------HHcCCHHHHHHHHHHHHHHHHHHH
Confidence 00 0 0 0 12223332 344568899999999999999999
Q ss_pred HHHHHhCCCCcCCCCCcceEEEEeceeeccchhHHHHHHHHHHHHhcccCCccEEEEE---cCChhHHHHHHHH
Q 011505 404 GVLKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVIEH---SNDGSGIGAALLA 474 (484)
Q Consensus 404 aii~~~~~~~~~~~~~~~~~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~~~~~v~i~~---~~Dgs~iGAAl~A 474 (484)
++++.++| ..|.++|++. ..+.|.+.+++.+++...+ ..+.++. .+|++.+|||.++
T Consensus 227 ~l~~~l~p----------~~ivlgG~~~-~~~~~~~~l~~~l~~~~~~---~~~~i~~~~~~~~a~~~GAa~l~ 286 (289)
T 2aa4_A 227 DIKATTDC----------QCVVVGGSVG-LAEGYLALVETYLAQEPAA---FHVDLLAAHYRHDAGLLGAALLA 286 (289)
T ss_dssp HHHHHHCC----------SEEEEEHHHH-TSTTHHHHHHHHHTTSCGG---GCCEEEECSCSSCHHHHHHHHHH
T ss_pred HHHHhcCC----------CEEEEeCccc-ccHHHHHHHHHHHHHhcCc---cCCEEEECCCCCchHHHHHHHHH
Confidence 99999998 4699999998 7899999999998875322 1344543 7889999999876
|
| >2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10 | Back alignment and structure |
|---|
Probab=99.90 E-value=1.4e-22 Score=201.77 Aligned_cols=267 Identities=18% Similarity=0.220 Sum_probs=195.0
Q ss_pred eEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCceeeeee
Q 011505 96 TYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGFT 175 (484)
Q Consensus 96 ~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~lGft 175 (484)
++|+||+|||++|++++++.|+ ++.+ ..+|.. .+.+++++.|.+ ++++ . +...+|++
T Consensus 5 ~~lgidiggt~i~~~l~d~~g~---il~~----~~~~~~---~~~~~~~~~i~~----~i~~--~-------~i~gigi~ 61 (292)
T 2gup_A 5 TIATIDIGGTGIKFASLTPDGK---ILDK----TSISTP---ENLEDLLAWLDQ----RLSE--Q-------DYSGIAMS 61 (292)
T ss_dssp CEEEEEEETTEEEEEEECTTCC---EEEE----EEECCC---SSHHHHHHHHHH----HHTT--S-------CCSEEEEE
T ss_pred EEEEEEECCCEEEEEEECCCCC---EEEE----EEEeCC---CCHHHHHHHHHH----HHHh--C-------CCcEEEEE
Confidence 4899999999999999999875 5543 223332 234555555544 4433 1 25679999
Q ss_pred eeeeeeeeecCceEE---------ECccHHHHHHHHHHhcCCCceEEEEEechHHHHhcccc--cCCCcEEEEEEccCcc
Q 011505 176 FSFPVMQTSINTGTL---------VGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRY--TNKDVVAAVILGTGSN 244 (484)
Q Consensus 176 FSfPv~q~~~~~G~l---------~G~dv~~~L~~al~r~gl~v~v~alvNDtvatlla~~y--~~~~~~iglIlGTG~N 244 (484)
.+.|++ ..+|++ .+.++.+.| +.+ ++|| .+.||++++++++.+ .+.++.+.+++|||++
T Consensus 62 ~pG~vd---~~~g~v~~~~~~~~~~~~~l~~~l-~~~---~~pv---~v~NDa~aaa~~e~~~~~~~~~~v~l~~GtGiG 131 (292)
T 2gup_A 62 VPGAVN---QETGVIDGFSAVPYIHGFSWYEAL-SSY---QLPV---HLENDANCVGLSELLAHPELENAACVVIGTGIG 131 (292)
T ss_dssp ESSEEC---TTTCBEESCCSSGGGSSSBHHHHT-GGG---CCCE---EEEEHHHHHHHHHHHHCTTCSSEEEEEESSSEE
T ss_pred ecCccc---CCCCEEEecCCCCcccCCCHHHHH-HHc---CCCE---EEechHHHHHHHHHHhcCCCCeEEEEEECCceE
Confidence 999998 444544 366888888 777 8884 699999999999976 4567899999999999
Q ss_pred eEEEcccccccCcCCCCCCCCcEEEeCCCCCCCCCCCCCchhhhhhhccCCCCCcceeeeccccccHHHHHHHHHHHHHh
Q 011505 245 AAYVERAQAIPKWHGVPSKSGEMVINMEWGDFRSSHLSLSEYDNALDAESLNPGEQIFEKMISGMYLGEIVRRVLLRMAQ 324 (484)
Q Consensus 245 a~yie~~~~i~k~~~~~~~~g~miIN~EwG~f~~~~lp~T~~D~~lD~~s~npg~q~fEkm~SG~YLgei~R~il~~~~~ 324 (484)
++++.+++.+.+.++.+++.|||.++. ++ + + .+|+|.++|+..|-+.++.. .
T Consensus 132 ~giv~~G~l~~G~~g~aGEiGh~~~~~----~~----------------~-~--~gcle~~~s~~~l~~~~~~~---~-- 183 (292)
T 2gup_A 132 GAMIINGRLHRGRHGLGGEFGYMTTLA----PA----------------E-K--LNNWSQLASTGNMVRYVIEK---S-- 183 (292)
T ss_dssp EEEEETTEEECCTTSCTTCGGGCBSSC----CS----------------S-S--CCBHHHHHSHHHHHHHHHHH---H--
T ss_pred EEEEECCEEEecCCCCCccceeEEecc----CC----------------C-C--CCcHHHhcCHHHHHHHHHHh---h--
Confidence 999999999999888889999998864 11 1 2 36999999998885443321 1
Q ss_pred ccccCCCCCCCCCCCCCccChhhhhhcccCCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011505 325 EAAFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELCNIVATRGARLAAAGILG 404 (484)
Q Consensus 325 ~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~i~~~V~~RaA~l~Aa~iaa 404 (484)
+ . + .++ ...+++. ++..+..|..+++++++++|.+|++
T Consensus 184 -~-----~-~-------~~~-----------------~~~v~~~-----------a~~gd~~a~~i~~~~~~~L~~~i~~ 221 (292)
T 2gup_A 184 -G-----H-T-------DWD-----------------GRKIYQE-----------AAAGNILCQEAIERMNRNLAQGLLN 221 (292)
T ss_dssp -S-----S-C-------CCC-----------------HHHHHHH-----------HHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred -C-----C-C-------CCC-----------------HHHHHHH-----------HHcCCHHHHHHHHHHHHHHHHHHHH
Confidence 0 0 0 001 1223222 3445588999999999999999999
Q ss_pred HHHHhCCCCcCCCCCcceEEEEeceeeccchhHHHHHHHHHHHHhcccCC--ccEEEE---EcCChhHHHHHHHHHH
Q 011505 405 VLKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELF--KNIVIE---HSNDGSGIGAALLAAS 476 (484)
Q Consensus 405 ii~~~~~~~~~~~~~~~~~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~~~--~~v~i~---~~~Dgs~iGAAl~Aa~ 476 (484)
+++.++| ..|.++|++. ..|.|.+.+++.+++...+... ..+.++ +.+|++.+|||.++.-
T Consensus 222 l~~~l~p----------~~IvlgG~i~-~~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~~~~~ 287 (292)
T 2gup_A 222 IQYLIDP----------GVISLGGSIS-QNPDFIQGVKKAVEDFVDAYEEYTVAPVIQACTYHADANLYGALVNWLQ 287 (292)
T ss_dssp HHHHHCC----------SEEEEESGGG-GCHHHHHHHHHHHHHHHHHCTTCCSCCCEEECSCSTTHHHHHHHHHHHH
T ss_pred HHHHhCC----------CEEEEeCccc-cchHHHHHHHHHHHHhhcccccccCCCeEEEcccCChhhHHHHHHHHHH
Confidence 9999998 5799999996 5799999999999887543211 224444 4788999999988753
|
| >3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.2e-22 Score=209.13 Aligned_cols=258 Identities=17% Similarity=0.117 Sum_probs=193.3
Q ss_pred ceeeEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeecCCCccccCcchhHHHHHH---HHHHHHhhcccccccCCCCc
Q 011505 93 EKGTYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAA---ELAKFVSQESEEFKLSPGRQ 169 (484)
Q Consensus 93 E~G~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~---~i~~fl~~~~~~~~~~~~~~ 169 (484)
+.+++|++|+|||++|+++++ .|+ ++.+. .+++.+. . +.+++++.|++ .+.++++ .+.
T Consensus 7 d~~~~lgiDIGgt~i~~~l~d-~G~---il~~~-~~~~~~~---~-~~~~~l~~i~~~~~~i~~~~~----------~~i 67 (366)
T 3mcp_A 7 DNRIVMTLDAGGTNFVFSAIQ-GGK---EIADP-VVLPACA---D-CLDKCLGNLVEGFKAIQAGLP----------EAP 67 (366)
T ss_dssp CCCEEEEEECSSSEEEEEEEE-TTE---ECSCC-EEEECCT---T-CHHHHHHHHHHHHHHHHTTCS----------SCC
T ss_pred CCCEEEEEEECcceEEEEEEE-CCE---EEEEE-EEEECCC---C-CHHHHHHHHHHHHHHHHHHhh----------cCC
Confidence 456899999999999999999 774 54321 0234332 2 57888888888 6655543 236
Q ss_pred eeeeeeeeeeeeeeecCceEE---------E-CccHHHHHHHHHHhcCCCceEEEEEechHHHHhcccccC---------
Q 011505 170 RELGFTFSFPVMQTSINTGTL---------V-GRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRYTN--------- 230 (484)
Q Consensus 170 ~~lGftFSfPv~q~~~~~G~l---------~-G~dv~~~L~~al~r~gl~v~v~alvNDtvatlla~~y~~--------- 230 (484)
..+|++++.|++ ..+|++ . |.|+.+.|++.| ++| +.|.||+++..+++.|.+
T Consensus 68 ~gIGIavPG~Vd---~~~G~i~~~~nlp~w~~~~~l~~~L~~~~---g~P---V~veNDanaaAlgE~~~G~~p~~~~~l 138 (366)
T 3mcp_A 68 VAISFAFPGPAD---YQAGIIGDLPNFPSFRGGVALGPFLEDIF---GIP---VFINNDGSLFAYGEALTGVLPEINRRL 138 (366)
T ss_dssp CEEEEECCSSEE---TTTTEECCCTTCGGGTTCBCHHHHHHHHH---CSC---EEEECHHHHHHHHHHHTSHHHHHHHHH
T ss_pred eEEEEEecceEe---CCCCEEEeCCCcccccCCCCHHHHHHHHH---CCC---EEEechhhHHHHHHHHhCCCccccccc
Confidence 789999999998 555655 4 789999999999 999 469999999999998654
Q ss_pred --------CCcEEEEEEccCcceEEEcccccccCcCCCCCCCCcEEEeCCCCCCCCCCCCCchhhhhhhccCCCCCccee
Q 011505 231 --------KDVVAAVILGTGSNAAYVERAQAIPKWHGVPSKSGEMVINMEWGDFRSSHLSLSEYDNALDAESLNPGEQIF 302 (484)
Q Consensus 231 --------~~~~iglIlGTG~Na~yie~~~~i~k~~~~~~~~g~miIN~EwG~f~~~~lp~T~~D~~lD~~s~npg~q~f 302 (484)
.++.+.+.+|||++++++.+++.+.+.++.++|.|||. | . |++. +|+
T Consensus 139 ~~~g~~~~~~~~v~l~lGtGIG~givi~G~l~~G~~g~AGEiGH~~-~----~------------------CG~~--Gcl 193 (366)
T 3mcp_A 139 REAGSTKRYKNLLGVTLGTGFGAGVVIDGELLRGDNAAGGYVWCLR-N----K------------------KYPE--YIV 193 (366)
T ss_dssp HHTTCCCCCCEEEEEEESSSEEEEEEETTEECCCTTSCTTCCTTSB-C----S------------------SCTT--SBG
T ss_pred ccccccCCCCcEEEEEECCcceEEEEECCEEecCCCCCCceeeccc-C----C------------------CCCC--cce
Confidence 57899999999999999999999999999889999998 4 2 4555 699
Q ss_pred eeccccccHHHHHHHHHHHHHhccccCCCCCCCCCCCCCccChhhhhhcccCCCCChHHHHHHHHHhhCCCCCCHHHHH-
Q 011505 303 EKMISGMYLGEIVRRVLLRMAQEAAFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRK- 381 (484)
Q Consensus 303 Ekm~SG~YLgei~R~il~~~~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~- 381 (484)
|.++|+..|-+..+.... . ++ .++ ..++++. ++
T Consensus 194 E~~~S~~al~~~~~~~~~-----------~-~~------~~~-----------------~~~i~~~-----------a~~ 227 (366)
T 3mcp_A 194 EESVSIRAVMRVYAERSG-----------D-AG------ART-----------------PKEIFEI-----------AEG 227 (366)
T ss_dssp GGTSSHHHHHHHHHHHSS-----------C-CS------CCC-----------------HHHHHHH-----------HHT
T ss_pred eeeecHHHHHHHHHHhhC-----------C-CC------CCC-----------------HHHHHHH-----------Hhh
Confidence 999999999655443210 0 00 011 1222222 22
Q ss_pred --HHH-HHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCcceEEEEeceeeccchhHHHHHHHHHHHHhcccCCccEE
Q 011505 382 --TIV-ELCNIVATRGARLAAAGILGVLKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIV 458 (484)
Q Consensus 382 --~~~-~i~~~V~~RaA~l~Aa~iaaii~~~~~~~~~~~~~~~~~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~~~~~v~ 458 (484)
..+ ..|..+++++++++|.+|+++++.++| .|.++|++....+.|.+.+++.+++.+.+.....+.
T Consensus 228 ~~~gD~~~a~~~l~~~~~~Lg~~i~nl~~~ldP-----------~IviGGgi~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 296 (366)
T 3mcp_A 228 IRPGNREAAIAAFEELGEMAGDALASAITLIDG-----------LIVIGGGLSGASKYILPVLLKEMNAQTGMMDGARFG 296 (366)
T ss_dssp SSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHCS-----------EEEEESGGGGGHHHHHHHHHHHHHHHTTCC------
T ss_pred hhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----------EEEEEChhhhchHHHHHHHHHHHHHhcchhccCCce
Confidence 344 788899999999999999999999985 689999999999999999999999987665445666
Q ss_pred EE
Q 011505 459 IE 460 (484)
Q Consensus 459 i~ 460 (484)
++
T Consensus 297 i~ 298 (366)
T 3mcp_A 297 RL 298 (366)
T ss_dssp --
T ss_pred EE
Confidence 65
|
| >1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=7.1e-22 Score=200.63 Aligned_cols=284 Identities=14% Similarity=0.172 Sum_probs=188.2
Q ss_pred eeeEEEEEeCCceEEEEEEEe-CCCcceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCceee
Q 011505 94 KGTYYALDLGGTNFRVLRVHL-GGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQREL 172 (484)
Q Consensus 94 ~G~~laiDlGGTnlRv~~V~l-~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~l 172 (484)
.+++|++|+||||+|++++++ ++. +... .++|+.. .+.+ .+.|.+++++.+ .+...+
T Consensus 13 ~~~~lgiDiGGT~i~~~l~dl~~g~---i~~~----~~~~~~~----~~~~----~~~i~~~~~~~~-------~~i~gi 70 (332)
T 1sz2_A 13 TKYALVGDVGGTNARLALCDIASGE---ISQA----KTYSGLD----YPSL----EAVIRVYLEEHK-------VEVKDG 70 (332)
T ss_dssp -CEEEEEEEETTEEEEEEEETTTCC---EEEE----EEEEGGG----CSCH----HHHHHHHHHHSC-------CCCCEE
T ss_pred CCEEEEEEechhheEEEEEECCCCc---EEEE----EEecCCC----cCCH----HHHHHHHHHhcC-------CCccEE
Confidence 568999999999999999997 453 4432 2334321 2233 344555655432 135679
Q ss_pred eeeeeeeeeeeecCceEE--ECccHHHHHHHHHHhcCCC-ceEEEEEechHHHHhccccc--------------CCCcEE
Q 011505 173 GFTFSFPVMQTSINTGTL--VGRDVVEELSRAMAKQGLD-MSVSALVNDTVGTLAGGRYT--------------NKDVVA 235 (484)
Q Consensus 173 GftFSfPv~q~~~~~G~l--~G~dv~~~L~~al~r~gl~-v~v~alvNDtvatlla~~y~--------------~~~~~i 235 (484)
|+.++.|++........+ . .+ .+.|++.| ++| | .|.||+++..+++.+. +.++.+
T Consensus 71 gi~~pG~vd~~~~~~~nl~w~-~~-~~~l~~~~---~~p~V---~v~NDanaaalgE~~~~~~~~~~~g~g~~~~~~~~~ 142 (332)
T 1sz2_A 71 CIAIACPITGDWVAMTNHTWA-FS-IAEMKKNL---GFSHL---EIINDFTAVSMAIPMLKKEHLIQFGGAEPVEGKPIA 142 (332)
T ss_dssp EEEESSCCCSSEECCSSSCCC-EE-HHHHHHHH---TCSEE---EEEEHHHHHHHHGGGCCGGGEEECSSCCCCTTCCEE
T ss_pred EEEEeCceeCCEEeeeCCCCc-CC-HHHHHHHh---CCCcE---EEEeCHhHHhccccccChhhheecCCCCCCCCCcEE
Confidence 999999997321100000 2 45 57888888 887 5 6999999999999863 347789
Q ss_pred EEEEccCcceEEEcccccccCcCCCCCCCCcEEEeCCCCCCCCCCCCCchhhhh----hhccCCCCCcceeeeccccccH
Q 011505 236 AVILGTGSNAAYVERAQAIPKWHGVPSKSGEMVINMEWGDFRSSHLSLSEYDNA----LDAESLNPGEQIFEKMISGMYL 311 (484)
Q Consensus 236 glIlGTG~Na~yie~~~~i~k~~~~~~~~g~miIN~EwG~f~~~~lp~T~~D~~----lD~~s~npg~q~fEkm~SG~YL 311 (484)
.+++|||++++++.+++ .++++.++|.|||.++.. | +.+.. +-..|+ .+|+|.++||..|
T Consensus 143 ~v~~GTGiG~giv~~g~--~G~~g~agE~GH~~v~~~-~----------~~~~~l~~~~c~~~g---~gclE~~~S~~~l 206 (332)
T 1sz2_A 143 VYGAGTGLGVAHLVHVD--KRWVSLPGEGGHVDFAPN-S----------EEEAIILEILRAEIG---HVSAERVLSGPGL 206 (332)
T ss_dssp EEEESSSEEEEEEEEET--TEEEEEECCGGGSBCCCC-S----------HHHHHHHHHHHHHSS---SCBGGGTSSHHHH
T ss_pred EEEcCccceEEEEecCC--CCeeeCCCCccccCcCCC-C----------hHHHHHHHHHHhccC---CcchhhhccHHHH
Confidence 99999999999999877 677777788999887643 1 10100 001233 4699999999999
Q ss_pred HHHHHHHHHHHHhccccCCCCCCCCCCCCCccChhhhhhcccCCCCChHHHHHHHHHhhCCCCCCHHHHHHH-HHHHHHH
Q 011505 312 GEIVRRVLLRMAQEAAFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTI-VELCNIV 390 (484)
Q Consensus 312 gei~R~il~~~~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~-~~i~~~V 390 (484)
-+..+..... .. . .+..+ ....+++. ++.. +..|..+
T Consensus 207 ~~~~~~~~~~---~~--------~---~~~~~-----------------~~~~i~~~-----------a~~G~D~~A~~~ 244 (332)
T 1sz2_A 207 VNLYRAIVKA---DN--------R---LPENL-----------------KPKDITER-----------ALADSCTDCRRA 244 (332)
T ss_dssp HHHHHHHHHH---TT--------C---CCCCC-----------------CHHHHHHH-----------HHHTCCHHHHHH
T ss_pred HHHHHHHhhc---cC--------C---CccCC-----------------CHHHHHHH-----------HHcCCCHHHHHH
Confidence 7766543211 00 0 00001 12333333 5566 6899999
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCcCCCCCcceE-EEEeceeecc-chhHH-HHHHHHHHH--Hhccc-CCccEEEEEcCC
Q 011505 391 ATRGARLAAAGILGVLKKMGRDAAKDGDKQKTV-IAMDGGLYEH-YAEYS-KCLENTLEE--LLGEE-LFKNIVIEHSND 464 (484)
Q Consensus 391 ~~RaA~l~Aa~iaaii~~~~~~~~~~~~~~~~~-I~vdGsv~~~-~p~f~-~~l~~~l~~--l~~~~-~~~~v~i~~~~D 464 (484)
++++++++|.+|+++++.++| .. |.+.||+... .+.|. +.+++.+++ .+... ....+.+...+|
T Consensus 245 ~~~~~~~Lg~~i~~l~~~l~P----------~~gvvigGGi~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 314 (332)
T 1sz2_A 245 LSLFCVIMGRFGGNLALNLGT----------FGGVFIAGGIVPRFLEFFKASGFRAAFEDKGRFKEYVHDIPVYLIVHDN 314 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHTC----------TTEEEEECSSSGGGHHHHHHSSHHHHHHCCGGGHHHHTTCCEEEECCSC
T ss_pred HHHHHHHHHHHHHHHHHHHCC----------CeEEEEEChhhhhHHHHhccHHHHHHHHhcCchhhHHhCceEEEEECCc
Confidence 999999999999999999998 34 8999999886 44444 356666653 12110 122455556889
Q ss_pred hhHHHHHHHHH
Q 011505 465 GSGIGAALLAA 475 (484)
Q Consensus 465 gs~iGAAl~Aa 475 (484)
++.+|||.++.
T Consensus 315 a~l~GAa~l~~ 325 (332)
T 1sz2_A 315 PGLLGSGAHLR 325 (332)
T ss_dssp HHHHHHHHHHH
T ss_pred hhHHHHHHHHH
Confidence 99999998874
|
| >2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi} | Back alignment and structure |
|---|
Probab=99.87 E-value=5e-22 Score=204.88 Aligned_cols=290 Identities=14% Similarity=0.045 Sum_probs=196.8
Q ss_pred eeeEEEEEeCCceEEEEEEEe----CCCcceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCc
Q 011505 94 KGTYYALDLGGTNFRVLRVHL----GGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQ 169 (484)
Q Consensus 94 ~G~~laiDlGGTnlRv~~V~l----~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~ 169 (484)
.+++|++|+|||++|++++++ .|+ ++.+. ...|. .+.+++++.|.+.+.++..... .+.
T Consensus 28 ~~~~lgiDiGgt~i~~~l~d~~~~~~g~---il~~~---~~~~~----~~~~~~~~~i~~~i~~~~~~~~-------~~i 90 (373)
T 2q2r_A 28 APLTFVGDVGGTSARMGFVREGKNDSVH---ACVTR---YSMKR----KDITEIIEFFNEIIELMPASVM-------KRV 90 (373)
T ss_dssp SCEEEEEEECSSEEEEEEEEECGGGCEE---EEEEE---EECTT----CBGGGHHHHHHHHHHHSCHHHH-------TTE
T ss_pred CCeEEEEEEccccEEEEEEecccCCCcc---EEEEe---eecCC----CCHHHHHHHHHHHHHHHhhccc-------ccc
Confidence 357999999999999999999 553 55321 11343 2567888888888877654321 235
Q ss_pred eeeeeeeeeeeeeeecCceE--E---ECc-cHHHHHHHHHHhcCC-CceEEEEEechHHHHhc---------------cc
Q 011505 170 RELGFTFSFPVMQTSINTGT--L---VGR-DVVEELSRAMAKQGL-DMSVSALVNDTVGTLAG---------------GR 227 (484)
Q Consensus 170 ~~lGftFSfPv~q~~~~~G~--l---~G~-dv~~~L~~al~r~gl-~v~v~alvNDtvatlla---------------~~ 227 (484)
..+|+.++.|++. +.-. + .+. ++.+++++.+ ++ | +.|.||+++.+++ +.
T Consensus 91 ~gigi~~pG~vd~---g~v~~~~~~~~~~~~l~~~l~~~~---~~~p---v~v~NDa~aaalge~~l~~~~~~~~~~~E~ 161 (373)
T 2q2r_A 91 KAGVINVPGPVTG---GAVGGPFNNLKGIARLSDYPKALF---PPGH---SAILNDLEAGGFGVLAVSDAHVFSEYFGVM 161 (373)
T ss_dssp EEEEEEESSCEET---TTEECCCSSSBSCEEGGGSCTTTS---CTTS---EEEEEHHHHHHHHHHHHHHTTCHHHHEEEE
T ss_pred cEEEEEeeccccC---CEEeccCCCCCCcCCHHHHHHHhc---CCCC---EEEEccHhHHhccccccChhhhccccchhh
Confidence 6799999999984 1111 1 453 7777776655 66 6 4699999999999 55
Q ss_pred cc----------------CCCcEEEEEEccCcceEEEcccccccCcCCCCCCCCcEEEeCCCCCCCCCCCCCchhhhhhh
Q 011505 228 YT----------------NKDVVAAVILGTGSNAAYVERAQAIPKWHGVPSKSGEMVINMEWGDFRSSHLSLSEYDNALD 291 (484)
Q Consensus 228 y~----------------~~~~~iglIlGTG~Na~yie~~~~i~k~~~~~~~~g~miIN~EwG~f~~~~lp~T~~D~~lD 291 (484)
+. +.++.+.+++|||++++++.+++.+.++++.++|.|||.++.+.. |. ....+-
T Consensus 162 ~~~~~~~~~~~~~~g~~~~~~~~~~v~~GTGiG~gii~~g~l~~G~~~~aGE~Gh~~~~~~~~-c~--------cg~~l~ 232 (373)
T 2q2r_A 162 WEGTQWRTCEQEPAGSVIGRGRCLVLAPGTGLGSSLIYYNPPMNQHIVVPLELGSQTLPMRKD-ID--------YIQTLH 232 (373)
T ss_dssp ECCTTTTTTCSSCTTSSCCSSCEEEEEESSSEEEEEEEECC---CEEEEEECGGGSBCCCSSC-HH--------HHHHHH
T ss_pred cccccccccccCCCcCcCCCCCEEEEEeCCceeEEEEecCcccCCCcccccccceeecCCCCC-cc--------hhHHHH
Confidence 53 347899999999999999999988888887788999999875422 32 111111
Q ss_pred ccCCCCCcceeeeccccccHHHHHHHHHHHHHhccccCCCCCCCCCCCCCccChhhhhhcccCCCCChHHHHHHHHHhhC
Q 011505 292 AESLNPGEQIFEKMISGMYLGEIVRRVLLRMAQEAAFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILE 371 (484)
Q Consensus 292 ~~s~npg~q~fEkm~SG~YLgei~R~il~~~~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~ 371 (484)
.... +..|+|.++||..|-++.+... . + . ++ ..+ ...+++.
T Consensus 233 ~~~~--~~g~lE~~~S~~~l~~~~~~~~----~-~-----~-~~------~~~-----------------~~~i~~~--- 273 (373)
T 2q2r_A 233 AELK--LFPNYENMVSGAGLEFHYRQVV----R-G-----S-RP------PCS-----------------AGEIAKL--- 273 (373)
T ss_dssp HHHT--SCCBHHHHSSHHHHHHHHHHHH----T-T-----S-SC------CCC-----------------HHHHHHH---
T ss_pred HHhh--ccccHhHhcCHHHHHHHHHHHh----c-C-----C-CC------CCC-----------------HHHHHHH---
Confidence 1111 2379999999999976554321 0 1 0 00 011 2223332
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCcceEEEEeceeeccchhHHH--HHHHHHHHHh
Q 011505 372 ISSTSLSMRKTIVELCNIVATRGARLAAAGILGVLKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSK--CLENTLEELL 449 (484)
Q Consensus 372 ~~~~~~~d~~~~~~i~~~V~~RaA~l~Aa~iaaii~~~~~~~~~~~~~~~~~I~vdGsv~~~~p~f~~--~l~~~l~~l~ 449 (484)
++..+..|..+++++++++|.+++++++.++| ..|.+.||...+.+.|.+ .+++.+++.+
T Consensus 274 --------a~~gD~~a~~~l~~~~~~L~~~i~~l~~~l~p----------~~IvlgGG~~~~~~~~~~~~~i~~~l~~~~ 335 (373)
T 2q2r_A 274 --------ASEGDANACKAMKKYHEYLMRVGSEASMALLP----------LTIVLVGDNIVNNAFFYRNPQNLKEMHHEA 335 (373)
T ss_dssp --------HHTTCHHHHHHHHHHHHHHHHHHHHHHHHHCC----------SEEEECSHHHHHTHHHHHSHHHHHHHHHHH
T ss_pred --------HHcCCHHHHHHHHHHHHHHHHHHHHHHHHHCC----------CEEEEeCChHhCchhhhcchhHHHHHHHHH
Confidence 34455889999999999999999999999998 468898884444588988 8888888764
Q ss_pred cccC------CccEEEE---EcCChhHHHHHHHHH
Q 011505 450 GEEL------FKNIVIE---HSNDGSGIGAALLAA 475 (484)
Q Consensus 450 ~~~~------~~~v~i~---~~~Dgs~iGAAl~Aa 475 (484)
.+.. ...+.+. +.+|++.+|||.++.
T Consensus 336 ~~~~~~~~~~~~~~~i~~~~~~~~a~l~GAa~l~~ 370 (373)
T 2q2r_A 336 LNHEMERFGFQSRVSYLRQKKLLNLNLMGCYRCGL 370 (373)
T ss_dssp TCSGGGGGTSGGGCEEEEECSCCCHHHHHHHHHHH
T ss_pred hhcccchhhhhcCCcEEEEecCCchhHHHHHHHHH
Confidence 3321 1234443 478999999998863
|
| >2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=2e-19 Score=182.80 Aligned_cols=299 Identities=16% Similarity=0.174 Sum_probs=185.9
Q ss_pred eEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeec-CCCccccCcchhHHHHHHHHHHHHhhcccccccCCC-Cceeee
Q 011505 96 TYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSI-PPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPG-RQRELG 173 (484)
Q Consensus 96 ~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~i-p~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~-~~~~lG 173 (484)
++|+||+|||++|++++++.|+ ++.+ ..+ |......+.+++++.|++.|.+++++.+.. .. +...+|
T Consensus 7 ~~lgiDiGgt~~~~~l~d~~g~---i~~~----~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~----~~~~i~gig 75 (347)
T 2ch5_A 7 IYGGVEGGGTRSEVLLVSEDGK---ILAE----ADGLSTNHWLIGTDKCVERINEMVNRAKRKAGVD----PLVPLRSLG 75 (347)
T ss_dssp EEEEEEECTTCEEEEEEETTSC---EEEE----EEECCCCHHHHCHHHHHHHHHHHHHHHHHHHTCC----TTCCBSEEE
T ss_pred EEEEEEcCccceEEEEEeCCCC---EEEE----EeCCCCCcccCCHHHHHHHHHHHHHHHHHhcCCC----cccceeEEE
Confidence 7899999999999999999875 5533 223 222211357889999999999999876532 12 457788
Q ss_pred eeeeeeeeeeecCceEEECccHHHHHHHHHHhcCCCceEEEEEechHHHHhcccccCCCcEEEEEEccCcceEEEccccc
Q 011505 174 FTFSFPVMQTSINTGTLVGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRYTNKDVVAAVILGTGSNAAYVERAQA 253 (484)
Q Consensus 174 ftFSfPv~q~~~~~G~l~G~dv~~~L~~al~r~gl~v~v~alvNDtvatlla~~y~~~~~~iglIlGTG~Na~yie~~~~ 253 (484)
++.+.|++.. .+.++.+.|++.+...++| +.|.||+++++++ .| .+..+.+++|||++++++..
T Consensus 76 i~~pG~vd~~-------~~~~l~~~l~~~~~~~~~p---v~v~NDa~aaa~a-~~--~~~~v~v~~GTGig~~~v~~--- 139 (347)
T 2ch5_A 76 LSLSGGDQED-------AGRILIEELRDRFPYLSES---YLITTDAAGSIAT-AT--PDGGVVLISGTGSNCRLINP--- 139 (347)
T ss_dssp EEETTTTCHH-------HHHHHHHHHHHHCTTSBSC---EEEEEHHHHHHHH-HC--SSCEEEEEESSSEEEEEECT---
T ss_pred EeccCCCchH-------HHHHHHHHHHHhcCCCCce---EEEECcHHHHHHh-hC--CCCcEEEEEcCCceeEEEcC---
Confidence 8899988732 1345666666665111266 4699999999999 44 36789999999999987642
Q ss_pred ccCcCCCCCCCCcEEEeCCCCCCCCCCCCCchhhhhhhccCCCCCcceeee-ccccccHHHHHHHHHHHHHhccccCCCC
Q 011505 254 IPKWHGVPSKSGEMVINMEWGDFRSSHLSLSEYDNALDAESLNPGEQIFEK-MISGMYLGEIVRRVLLRMAQEAAFFGDT 332 (484)
Q Consensus 254 i~k~~~~~~~~g~miIN~EwG~f~~~~lp~T~~D~~lD~~s~npg~q~fEk-m~SG~YLgei~R~il~~~~~~~~lF~~~ 332 (484)
.|..+- |++. +|+|- ..||.|++........+..+ + .
T Consensus 140 ----------~G~~c~------------------------cG~~--G~l~~de~s~~~i~~~~~~~~~~~~d-g-----~ 177 (347)
T 2ch5_A 140 ----------DGSESG------------------------CGGW--GHMMGDEGSAYWIAHQAVKIVFDSID-N-----L 177 (347)
T ss_dssp ----------TSCEEE------------------------EECC--CTTTCCTTSHHHHHHHHHHHHHHHHH-T-----S
T ss_pred ----------CCCEEe------------------------cCCc--CcccCCCccHHHHHHHHHHHHHHHHh-C-----C
Confidence 122221 2233 36665 67888988654433222111 1 0
Q ss_pred CCCC-----C----CCCCccCh--hhhhhcccCCC-CChH-HHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 011505 333 VPPK-----L----EVPFALRT--PDMSAMHHDTS-SDLK-VVETKLKDILEISSTSLSMRKTIVELCNIVATRGARLAA 399 (484)
Q Consensus 333 ~~~~-----l----~~~~~l~t--~~ls~i~~d~~-~~~~-~~~~il~~~~~~~~~~~~d~~~~~~i~~~V~~RaA~l~A 399 (484)
.++. | ...+.+++ ..+..+..+.. .++. ....+++. ++..+..|..+++++++++|
T Consensus 178 ~~~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-----------a~~gD~~a~~il~~~~~~La 246 (347)
T 2ch5_A 178 EAAPHDIGYVKQAMFHYFQVPDRLGILTHLYRDFDKCRFAGFCRKIAEG-----------AQQGDPLSRYIFRKAGEMLG 246 (347)
T ss_dssp SCCSSCCHHHHHHHHHHHTCSSHHHHHTTTTTTCCHHHHHTTHHHHHHH-----------HHTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCCccHHHHHHHHHhCCCCHHHHHHHHhcCCcHHHHHHHHHHHHHH-----------HHcCCHHHHHHHHHHHHHHH
Confidence 1100 0 00000000 00100100000 0000 02333332 45567899999999999999
Q ss_pred HHHHHHHHHhCCCCcCCCCCcceEEEEeceeeccchhHHHHHHHHHHHHh--ccc-CCccEEEEEcCChhHHHHHHHHHH
Q 011505 400 AGILGVLKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELL--GEE-LFKNIVIEHSNDGSGIGAALLAAS 476 (484)
Q Consensus 400 a~iaaii~~~~~~~~~~~~~~~~~I~vdGsv~~~~p~f~~~l~~~l~~l~--~~~-~~~~v~i~~~~Dgs~iGAAl~Aa~ 476 (484)
.+|+++++.++|... .......|.++||+++..|.|.+.+++.+++.. +.. ....|.+....+++.+|||.++.-
T Consensus 247 ~~i~~l~~~~~p~~~--~~~~~~~IvlgGgv~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~~~a~~~GAa~la~~ 324 (347)
T 2ch5_A 247 RHIVAVLPEIDPVLF--QGKIGLPILCVGSVWKSWELLKEGFLLALTQGREIQAQNFFSSFTLMKLRHSSALGGASLGAR 324 (347)
T ss_dssp HHHHHHGGGSCGGGG--CSTTCEEEEEESGGGGGHHHHHHHHHHHHHHHC---CCCSCSEEEEEEESSCTHHHHHHHHHH
T ss_pred HHHHHHHHHhccccc--ccCCCceEEEECCcccCcHHHHHHHHHHHHhhccccccccCCceEEEecCCChHHHHHHHHHH
Confidence 999999999998300 001123899999999999999999999998874 211 112444444445899999988753
|
| >2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=2e-20 Score=186.64 Aligned_cols=278 Identities=15% Similarity=0.108 Sum_probs=178.6
Q ss_pred eEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCceeeeee
Q 011505 96 TYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGFT 175 (484)
Q Consensus 96 ~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~lGft 175 (484)
++|+||+|||++|+++++++|+ ++.+. +++.|. ....+.+++++.|.+.+.+++++. ...+|++
T Consensus 3 ~~lgiDiGgt~~~~~l~d~~g~---i~~~~--~~~~~~-~~~~~~~~~~~~i~~~i~~~~~~~----------~~~igi~ 66 (299)
T 2e2o_A 3 IIVGVDAGGTKTKAVAYDCEGN---FIGEG--SSGPGN-YHNVGLTRAIENIKEAVKIAAKGE----------ADVVGMG 66 (299)
T ss_dssp CEEEEEECSSCEEEEEECTTSC---EEEEE--EESCCC-HHHHCHHHHHHHHHHHHHHHHTSC----------CSEEEEE
T ss_pred EEEEEEeCCCcEEEEEEcCCCC---EEEEE--eCCCCC-cccCCHHHHHHHHHHHHHHHHhcC----------CCEEEEE
Confidence 5899999999999999999875 55432 233222 111356789999999998887532 2468888
Q ss_pred eeeeeeeeecCceEEECccHHHHHHHHHHhcCCCceEEEEEechHHHHhcccccCCCcEEEEEEccCcceEEEccccccc
Q 011505 176 FSFPVMQTSINTGTLVGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRYTNKDVVAAVILGTGSNAAYVERAQAIP 255 (484)
Q Consensus 176 FSfPv~q~~~~~G~l~G~dv~~~L~~al~r~gl~v~v~alvNDtvatlla~~y~~~~~~iglIlGTG~Na~yie~~~~i~ 255 (484)
++.| +. .+|. .++.+.|++ + ++| +.+.||++++++++.+ .++.+.+++|||+ +..+. +.
T Consensus 67 ~~G~-~~---~~~~---~~l~~~l~~-~---~~p---v~v~ND~~aaa~~e~~--~~~~v~l~~GTG~----i~~g~-~~ 125 (299)
T 2e2o_A 67 VAGL-DS---KFDW---ENFTPLASL-I---APK---VIIQHDGVIALFAETL--GEPGVVVIAGTGS----VVEGY-NG 125 (299)
T ss_dssp ETTC-CS---HHHH---HHHHHHHTT-S---SSE---EEEEEHHHHHHHHHHT--TSCEEEEEESSSE----EEEEE-CS
T ss_pred cCCC-Cc---hhHH---HHHHHHHHh-C---CCC---EEEeCcHHHHHhhccC--CCCeEEEEecCCE----EEEEE-cC
Confidence 8888 62 2232 244444444 4 455 5699999999999876 5678999999994 22233 44
Q ss_pred CcCCCCCCCCcEEEeCCCCCCCCCCCCCchhhhhhhccCCCCCc----ceeeeccccccHHHHHHHHHHHHHhccccCCC
Q 011505 256 KWHGVPSKSGEMVINMEWGDFRSSHLSLSEYDNALDAESLNPGE----QIFEKMISGMYLGEIVRRVLLRMAQEAAFFGD 331 (484)
Q Consensus 256 k~~~~~~~~g~miIN~EwG~f~~~~lp~T~~D~~lD~~s~npg~----q~fEkm~SG~YLgei~R~il~~~~~~~~lF~~ 331 (484)
+.++.+++.|||.++. ...| .|++.|- +|+|.++|+..|-+.++..+. .
T Consensus 126 G~~~~aGE~Gh~~~~~-g~~c----------------~cG~~gl~~~~~~le~~~s~~~l~~~~~~~~~----------~ 178 (299)
T 2e2o_A 126 KEFLRVGGRGWLLSDD-GSAY----------------WVGRKALRKVLKMMDGLENKTILYNKVLKTIN----------V 178 (299)
T ss_dssp SCEEEEECSCTTTCCT-TSHH----------------HHHHHHHHHHHHHHTTSSCCCHHHHHHHHHTT----------C
T ss_pred CeEEecCCcCCCcCCC-ccHH----------------HHHHHHHHHHHHHHhCCCCCCHHHHHHHHHhC----------C
Confidence 4444456666766652 1122 1333321 189999999999655443210 0
Q ss_pred CCCCCCCCCCccChhhhhhccc-C-CCCCh-HHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011505 332 TVPPKLEVPFALRTPDMSAMHH-D-TSSDL-KVVETKLKDILEISSTSLSMRKTIVELCNIVATRGARLAAAGILGVLKK 408 (484)
Q Consensus 332 ~~~~~l~~~~~l~t~~ls~i~~-d-~~~~~-~~~~~il~~~~~~~~~~~~d~~~~~~i~~~V~~RaA~l~Aa~iaaii~~ 408 (484)
..+. ..+..+.. + +..++ .....+++. ++..+..|..+++++++++|.+|+++++.
T Consensus 179 ~~~~----------~l~~~~~~~~~~~~~~~~~~~~v~~~-----------a~~gd~~a~~il~~~~~~La~~i~~l~~~ 237 (299)
T 2e2o_A 179 KDLD----------ELVMWSYTSSCQIDLVASIAKAVDEA-----------ANEGDTVAMDILKQGAELLASQAVYLARK 237 (299)
T ss_dssp CSHH----------HHHHHHHHHTTCHHHHHTTHHHHHHH-----------HHTTCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHH----------HHHHHHHcCCCCHHHHHHHHHHHHHH-----------HhcCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0000 00000000 0 00000 012233332 45567899999999999999999999999
Q ss_pred hCCCCcCCCCCcceEEEEeceeeccchhHHHHHHHHHHHHhcccCCccEEEEEcCChhHHHHHHHHHH
Q 011505 409 MGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVIEHSNDGSGIGAALLAAS 476 (484)
Q Consensus 409 ~~~~~~~~~~~~~~~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~~~~~v~i~~~~Dgs~iGAAl~Aa~ 476 (484)
++| ..|.++||+... +.|.+.+++.+++. .|..-..++.+.+|||.++.-
T Consensus 238 l~p----------~~IvlgGgv~~~-~~~~~~l~~~~~~~-------~i~~~~~~~~~~~GAa~la~~ 287 (299)
T 2e2o_A 238 IGT----------NKVYLKGGMFRS-NIYHKFFTLYLEKE-------GIISDLGKRSPEIGAVILAYK 287 (299)
T ss_dssp HTC----------SEEEEESGGGGS-HHHHHHHHHHHHHT-------TCEEECCSCCHHHHHHHHHHH
T ss_pred cCC----------CEEEEECCccCc-HHHHHHHHHHCCCC-------eEeccCCCCChHHHHHHHHHH
Confidence 988 579999999988 99999999888754 222222558999999988753
|
| >1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10 | Back alignment and structure |
|---|
Probab=99.81 E-value=4.4e-19 Score=174.57 Aligned_cols=241 Identities=19% Similarity=0.248 Sum_probs=172.0
Q ss_pred CCCceeeEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCc
Q 011505 90 TGDEKGTYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQ 169 (484)
Q Consensus 90 ~G~E~G~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~ 169 (484)
...+..+++++|+|||++|++++++.+. .++.. ...++.|. ..+.+++++.|.+.+.+++++.... ...
T Consensus 7 ~~~~~~~~lgidiggt~i~~~l~dl~~g--~i~~~-~~~~~~~~---~~~~~~~~~~i~~~i~~~~~~~~~~-----~~~ 75 (267)
T 1woq_A 7 KSHKNAPLIGIDIGGTGIKGGIVDLKKG--KLLGE-RFRVPTPQ---PATPESVAEAVALVVAELSARPEAP-----AAG 75 (267)
T ss_dssp ----CCCEEEEEECSSEEEEEEEETTTT--EEEEE-EEEEECCS---SCCHHHHHHHHHHHHHHHHTSTTCC-----CTT
T ss_pred hcCCCCEEEEEEECCCEEEEEEEECCCC--eEEEE-EEecCCCc---cCCHHHHHHHHHHHHHHHHHhcccc-----Ccc
Confidence 3345567999999999999999999732 24421 11233332 1356789999999999988653210 123
Q ss_pred eeeeeeeeeeeeeeecCceEE----------ECccHHHHHHHHHHhcCCCceEEEEEechHHHHhccccc----CCC-cE
Q 011505 170 RELGFTFSFPVMQTSINTGTL----------VGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRYT----NKD-VV 234 (484)
Q Consensus 170 ~~lGftFSfPv~q~~~~~G~l----------~G~dv~~~L~~al~r~gl~v~v~alvNDtvatlla~~y~----~~~-~~ 234 (484)
..+|+.++.|++ +|++ .+.|+.+.|++.+ ++|| .+.||++++++++.+. +.+ ..
T Consensus 76 ~~igi~~pG~v~-----~g~v~~~~~l~~~w~~~~l~~~l~~~~---~~pV---~v~NDanaaalaE~~~g~~~~~~~~~ 144 (267)
T 1woq_A 76 SPVGVTFPGIIQ-----HGVVHSAANVDKSWLNTDIDALLTARL---GRPV---EVINDADAAGLAEARYGAGAGVKGTV 144 (267)
T ss_dssp CCEEEEESSCEE-----TTEECCCTTSCGGGTTCBHHHHHHHHH---TSCE---EEEEHHHHHHHHHHHHSTTTTCCSEE
T ss_pred ceEEEEccceEc-----CCEEEeCCCCCCCCCCCCHHHHHHHHH---CCCE---EEeehhHHHHHHHHHhCCCCCCCCcE
Confidence 469999999997 2333 4578999999999 8884 6999999999999874 233 57
Q ss_pred EEEEEccCcceEEEcccccccCcCCCCCCCCcEEEeCCCCCCCCCCCCCchhhhhhhccCCCCCcceeeeccccccHHHH
Q 011505 235 AAVILGTGSNAAYVERAQAIPKWHGVPSKSGEMVINMEWGDFRSSHLSLSEYDNALDAESLNPGEQIFEKMISGMYLGEI 314 (484)
Q Consensus 235 iglIlGTG~Na~yie~~~~i~k~~~~~~~~g~miIN~EwG~f~~~~lp~T~~D~~lD~~s~npg~q~fEkm~SG~YLgei 314 (484)
+.+++|||++++++.+++.+.+ +|.|||.++ | .++|.++|+..|-+
T Consensus 145 ~~l~~GtGIG~giv~~G~l~~G-----gEiGh~~v~--------------------------~--~~lE~~~S~~~l~~- 190 (267)
T 1woq_A 145 LVITLGTGIGSAFIFDGKLVPN-----AELGHLEID--------------------------G--HDAETKASAVARER- 190 (267)
T ss_dssp EEEEESSSEEEEEEETTEEETT-----CCGGGCEET--------------------------T--EEHHHHHSHHHHHH-
T ss_pred EEEEECcceEEEEEECCEEccC-----ceeeeEEec--------------------------C--ccHHHHhCHHHHhh-
Confidence 8999999999999999877655 466777764 1 25899999876521
Q ss_pred HHHHHHHHHhccccCCCCCCCCCCCCCccChhhhhhcccCCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHH
Q 011505 315 VRRVLLRMAQEAAFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELCNIVATRG 394 (484)
Q Consensus 315 ~R~il~~~~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~i~~~V~~Ra 394 (484)
. . ..++++
T Consensus 191 ----------~----------------------------~----------------------------------~~~~~~ 198 (267)
T 1woq_A 191 ----------D----------------------------G----------------------------------LSWDEY 198 (267)
T ss_dssp ----------T----------------------------T----------------------------------CCHHHH
T ss_pred ----------c----------------------------c----------------------------------hhHHHH
Confidence 0 0 013456
Q ss_pred HHHHHHHHHHHHHHhCCCCcCCCCCcceEEEEeceeeccchhHHHHHHHHHHHHhcccCCccEEEE-EcCChhHHHHHHH
Q 011505 395 ARLAAAGILGVLKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVIE-HSNDGSGIGAALL 473 (484)
Q Consensus 395 A~l~Aa~iaaii~~~~~~~~~~~~~~~~~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~~~~~v~i~-~~~Dgs~iGAAl~ 473 (484)
++++|.+|+++++.++| ..|.++|++....+.|.+.++ . ...|.+- +.+|++.+|||.+
T Consensus 199 ~~~l~~~l~~l~~~ldP----------~~IvlgG~i~~~~~~~~~~~~--------~--~~~i~~s~l~~~a~~~GAa~l 258 (267)
T 1woq_A 199 SVLLQRYFSHVEFLFSP----------ELFIVGGGISKRADEYLPNLR--------L--RTPIVPAVLRNEAGIVGAAIE 258 (267)
T ss_dssp HHHHHHHHHHHHHHHCC----------SEEEEESGGGGGGGGTGGGCC--------C--SSCEEECSCSTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCC----------CEEEEeChhhcccHHHHHhhc--------c--CceEEECCcCCcHHHHHHHHH
Confidence 78889999999999998 689999999998888876654 1 1233332 3689999999998
Q ss_pred HHHhc
Q 011505 474 AASHS 478 (484)
Q Consensus 474 Aa~~~ 478 (484)
+....
T Consensus 259 ~~~~~ 263 (267)
T 1woq_A 259 IALQH 263 (267)
T ss_dssp HHHHC
T ss_pred HHhcc
Confidence 86544
|
| >1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=8e-19 Score=181.72 Aligned_cols=282 Identities=12% Similarity=0.103 Sum_probs=190.6
Q ss_pred eEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeecCCCccccCcchhHHHH---HHHHHHHHhhcccccccCCCCceee
Q 011505 96 TYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYI---AAELAKFVSQESEEFKLSPGRQREL 172 (484)
Q Consensus 96 ~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~I---a~~i~~fl~~~~~~~~~~~~~~~~l 172 (484)
++|+||+|||++|+++++++ +++.+. +.+.+.... .+.+++++.+ .+.|.+++++.+.. ..+...+
T Consensus 3 ~vlgidiGgt~ik~al~d~~----~il~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~~~~----~~~i~gI 71 (381)
T 1saz_A 3 RILTINPGSTSTKLSIFEDE----RMVKMQ--NFSHSPDEL-GRFQKILDQLEFREKIARQFVEETGYS----LSSFSAF 71 (381)
T ss_dssp EEEEEEECSSEEEEEEEETT----EEEEEE--EEECCHHHH-HTCSSGGGGHHHHHHHHHHHHHTTTCC----GGGCSEE
T ss_pred eEEEEECCccceeEEEEecc----hheeee--ecccCcccc-cchhhHHHHHHHHHHHHHHHHHHcCCC----ccCceEE
Confidence 58999999999999999963 255332 233322100 0234556666 88888888765422 1234556
Q ss_pred eeeeeeeeeeeecCceEE----------------------ECccHHHHHHHHHHhcCCCceEEEEEechH---------H
Q 011505 173 GFTFSFPVMQTSINTGTL----------------------VGRDVVEELSRAMAKQGLDMSVSALVNDTV---------G 221 (484)
Q Consensus 173 GftFSfPv~q~~~~~G~l----------------------~G~dv~~~L~~al~r~gl~v~v~alvNDtv---------a 221 (484)
+.+++|++ ..+|.+ .+.++.+.|++.+ ++|+ .+.||++ +
T Consensus 72 -i~~pG~vd---~~~G~~~~i~~~~~~~l~~~~~~~~~~nl~~~l~~~l~~~~---~~Pv---~v~NDan~~~~~~~a~a 141 (381)
T 1saz_A 72 -VSRGGLLD---PIPGGVYLVDGLMIKTLKSGKNGEHASNLGAIIAHRFSSET---GVPA---YVVDPVVVDEMEDVARV 141 (381)
T ss_dssp -EEECCSCS---CBCSSEEECCHHHHHHHHHTTTCCCTTHHHHHHHHHHHHHH---CCCE---EEESCTTBCCCCGGGTB
T ss_pred -EecCCCCC---CCCCceEecCHHHHHHHHhcccccChhhhhHHHHHHHHHhc---CCCE---EEeCCCccccCcHHHHH
Confidence 77888887 333322 1445666677777 8885 5999999 8
Q ss_pred HHh-----------------cc-ccc----CCC--cEEEEEEccCcceEEEcccccccCcCCCCCCCCcEEEeCCCCCCC
Q 011505 222 TLA-----------------GG-RYT----NKD--VVAAVILGTGSNAAYVERAQAIPKWHGVPSKSGEMVINMEWGDFR 277 (484)
Q Consensus 222 tll-----------------a~-~y~----~~~--~~iglIlGTG~Na~yie~~~~i~k~~~~~~~~g~miIN~EwG~f~ 277 (484)
+.+ ++ .+. +.+ +.+.+.+|||+++|.+.+++.+.+..+.++| |||.++.. |.|.
T Consensus 142 aalp~~~r~~gfhgls~~~~aE~~~~g~~~~~~~~~~v~~~lGtGiG~g~i~~G~~~~G~~g~agE-Gh~~~~~~-g~c~ 219 (381)
T 1saz_A 142 SGHPNYQRKSIFHALNQKTVAKEVARMMNKRYEEMNLVVAHMGGGISIAAHRKGRVIDVNNALDGD-GPFTPERS-GTLP 219 (381)
T ss_dssp CSSTTCBCCCCSCHHHHHHHHHHHHHHTTCCGGGCEEEEEEESSSEEEEEEETTEEEEECCGGGTC-SSCCSSCC-CSCC
T ss_pred cCCcchhhhcccccccHHHHHHHHHHhcCCCCccCCEEEEEeCCCcEEEEEECCEEEEecCCCCCC-cceeeccC-CCCC
Confidence 878 77 442 334 8999999999999999999999888877788 99998754 4342
Q ss_pred CCCCCCchhhhhhhccCCCCCcceeeeccccccHHHHHHHHHHHHHhccccCCCCCCCCCCCCCccChhhhhhcccCCCC
Q 011505 278 SSHLSLSEYDNALDAESLNPGEQIFEKMISGMYLGEIVRRVLLRMAQEAAFFGDTVPPKLEVPFALRTPDMSAMHHDTSS 357 (484)
Q Consensus 278 ~~~lp~T~~D~~lD~~s~npg~q~fEkm~SG~YLgei~R~il~~~~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~ 357 (484)
|++--..|+|.++|+..|-+.++. .. .+. .++ . ..
T Consensus 220 ----------------cg~l~~gc~e~~~S~~~l~~~~~~-------~~---------------g~~--~~~---~--~~ 254 (381)
T 1saz_A 220 ----------------LTQLVDLCFSGKFTYEEMKKRIVG-------NG---------------GLV--AYL---G--TS 254 (381)
T ss_dssp ----------------HHHHHHHHTSSCCCTTGGGSTTTT-------SC---------------THH--HHH---S--CC
T ss_pred ----------------CcHHHHHHHHhCCCHHHHHHHHHh-------cc---------------Ccc--ccc---c--CC
Confidence 333112689999999887332211 00 000 000 0 01
Q ss_pred ChHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--CCCCcCCCCCcceEEEEeceeeccch
Q 011505 358 DLKVVETKLKDILEISSTSLSMRKTIVELCNIVATRGARLAAAGILGVLKKM--GRDAAKDGDKQKTVIAMDGGLYEHYA 435 (484)
Q Consensus 358 ~~~~~~~il~~~~~~~~~~~~d~~~~~~i~~~V~~RaA~l~Aa~iaaii~~~--~~~~~~~~~~~~~~I~vdGsv~~~~p 435 (484)
+ .+.+++. ++..+..|..+++++++.+|.+|++++..+ +| ..|.++||+.+..+
T Consensus 255 ~---~~~i~~~-----------a~~gd~~a~~~l~~~~~~la~~i~~l~~~l~~~p----------~~IvlgGgi~~~~~ 310 (381)
T 1saz_A 255 D---AREVVRR-----------IKQGDEWAKRVYRAMAYQIAKWIGKMAAVLKGEV----------DFIVLTGGLAHEKE 310 (381)
T ss_dssp C---HHHHHHH-----------HHTTCHHHHHHHHHHHHHHHHHHHHHHHHTTTCC----------SEEEEEEGGGGCTT
T ss_pred C---HHHHHHH-----------HHcCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCC----------CEEEEeCcCccChH
Confidence 1 2233332 334457889999999999999999999999 66 68999999999888
Q ss_pred hHHHHHHHHHHHHhcccCCccEEEEEcC---ChhHHHHHHHHH
Q 011505 436 EYSKCLENTLEELLGEELFKNIVIEHSN---DGSGIGAALLAA 475 (484)
Q Consensus 436 ~f~~~l~~~l~~l~~~~~~~~v~i~~~~---Dgs~iGAAl~Aa 475 (484)
.|++.+++.++.+. .+.+++++ |++.+|||.++.
T Consensus 311 ~l~~~i~~~l~~~~------~~~i~~~~~~~~a~~~GAa~l~~ 347 (381)
T 1saz_A 311 FLVPWITKRVSFIA------PVLVFPGSNEEKALALSALRVLR 347 (381)
T ss_dssp THHHHHHHHHTTTS------CEEEEEBCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhhc------CeEEEecCcchhHHHHHHHHHHc
Confidence 79999999887642 45666543 468899988763
|
| >3lm2_A Putative kinase; structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2, transf; HET: MSE; 1.70A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.66 E-value=5.8e-17 Score=156.10 Aligned_cols=199 Identities=17% Similarity=0.185 Sum_probs=140.0
Q ss_pred ceeeEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCceee
Q 011505 93 EKGTYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQREL 172 (484)
Q Consensus 93 E~G~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~l 172 (484)
+.++++++|+|||++| +++++++ +. .+.+.|. ..+.+++.+.|+ +++++. +...+
T Consensus 4 ~~~~~lgiDIGGT~i~--~~d~~g~---~~----~~~~t~~---~~~~~~~~~~i~----~~i~~~---------~i~gi 58 (226)
T 3lm2_A 4 EDQTVLAIDIGGSHVK--IGLSTDG---EE----RKVESGK---TMTGPEMVAAVT----AMAKDM---------TYDVI 58 (226)
T ss_dssp GGCCEEEEEECSSEEE--EEETTTC---CE----EEEECCT---TCCHHHHHHHHH----HHTTTC---------CCSEE
T ss_pred cCCEEEEEEECCCEEE--EEECCCC---EE----EEEECCC---CCCHHHHHHHHH----HHHHhC---------CCCEE
Confidence 3468999999999999 3666653 32 1133332 224455555554 444432 24679
Q ss_pred eeeeeeeeeeeecCc-e-----EEECccHHHHHHHHHHhcCCCceEEEEEechHHHHhcccccCCCcEEEEEEccCcceE
Q 011505 173 GFTFSFPVMQTSINT-G-----TLVGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRYTNKDVVAAVILGTGSNAA 246 (484)
Q Consensus 173 GftFSfPv~q~~~~~-G-----~l~G~dv~~~L~~al~r~gl~v~v~alvNDtvatlla~~y~~~~~~iglIlGTG~Na~ 246 (484)
|++++.|++....-. . -+.+.|+ ++.+ ++|| .+.||+++..+++.+. .+.+.+++|||++++
T Consensus 59 gi~~pG~Vd~~~~~~~~~nl~~~w~~~~l----~~~~---~~pv---~v~NDanaaalge~~~--~~~~~l~~GtGiG~g 126 (226)
T 3lm2_A 59 AMGYPGPVVHNKPLREPVNLGEGWVGYDY----EGAF---GRPV---RIVNDALMQAIGSYNG--GRMLFLGLGTGLGAA 126 (226)
T ss_dssp EEEESSCEETTEECSCCTTSCSCCTTCCH----HHHH---TSCE---EEEEHHHHHHHHHCCS--SEEEEEEESSSEEEE
T ss_pred EEEEEeEEECCeEEEECCcCCccccCCch----HHhc---CCeE---EEEEHHHHHHHHHhhc--CcEEEEEeCCceEEE
Confidence 999999998432100 0 0134455 3455 8884 6999999999999876 689999999999999
Q ss_pred EEcccccccCcCCCCCCCCcEEEeCCCCCCCCCCCCCchhhhhhhccCCCCCcceeeeccccccHHHHHHHHHHHHHhcc
Q 011505 247 YVERAQAIPKWHGVPSKSGEMVINMEWGDFRSSHLSLSEYDNALDAESLNPGEQIFEKMISGMYLGEIVRRVLLRMAQEA 326 (484)
Q Consensus 247 yie~~~~i~k~~~~~~~~g~miIN~EwG~f~~~~lp~T~~D~~lD~~s~npg~q~fEkm~SG~YLgei~R~il~~~~~~~ 326 (484)
++.+++.++ +|.|||.++.. +|+|.++|+..|-+ +.
T Consensus 127 ii~~G~l~~------GEiGH~~v~~~---------------------------gclE~~~s~~al~~---~~-------- 162 (226)
T 3lm2_A 127 MIVENVAQP------MEIAHLPYRKG---------------------------KTYEHYVSEAYREK---KG-------- 162 (226)
T ss_dssp EEETTEEEE------ECCTTSEEETT---------------------------EEHHHHTCHHHHHH---HC--------
T ss_pred EEECCEEee------eeeeeEEecCC---------------------------CcHHHHhCHHHHHH---HH--------
Confidence 999876654 46667766521 59999999988722 10
Q ss_pred ccCCCCCCCCCCCCCccChhhhhhcccCCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011505 327 AFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELCNIVATRGARLAAAGILGVL 406 (484)
Q Consensus 327 ~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~i~~~V~~RaA~l~Aa~iaaii 406 (484)
-+++++++|.+|++++
T Consensus 163 ----------------------------------------------------------------~~~~~~~L~~~la~l~ 178 (226)
T 3lm2_A 163 ----------------------------------------------------------------NAKWQKRVQDVVERLS 178 (226)
T ss_dssp ----------------------------------------------------------------HHHHHHHHHHHHHHHH
T ss_pred ----------------------------------------------------------------HHHHHHHHHHHHHHHH
Confidence 0356788999999999
Q ss_pred HHhCCCCcCCCCCcceEEEEeceeeccchhHHHHHHHHHH
Q 011505 407 KKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLE 446 (484)
Q Consensus 407 ~~~~~~~~~~~~~~~~~I~vdGsv~~~~p~f~~~l~~~l~ 446 (484)
+.++| ..|.++|++.+..+.|.+.+++.++
T Consensus 179 ~~~dP----------~~IVlGG~~~~~~~~~~~~i~~~~~ 208 (226)
T 3lm2_A 179 AALEP----------DEVVIGGGNVERLENLPPKCRRGDN 208 (226)
T ss_dssp HHHCC----------SEEEEESGGGGGCCCCCTTEEECCT
T ss_pred HHHCC----------CEEEEeChhhhhhhHHHHHHHHHHH
Confidence 99999 6899999999999988777665443
|
| >1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5 | Back alignment and structure |
|---|
Probab=99.65 E-value=2.7e-16 Score=156.65 Aligned_cols=265 Identities=13% Similarity=0.055 Sum_probs=142.1
Q ss_pred eEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeecCC-CccccCcchhHHHHHHHHHHHHhhcccccccCCCCceeeee
Q 011505 96 TYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPP-HLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGF 174 (484)
Q Consensus 96 ~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~ip~-~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~lGf 174 (484)
++|+||+|||++|+++++ +|+ ++.+ ...|+ +....+.+++++.|.+.+.+.++. .+...+|+
T Consensus 1 ~~lgiDiGGT~i~~~l~d-~g~---il~~----~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~---------~~i~~igi 63 (291)
T 1zxo_A 1 MILIADSGSTKTDWCVVL-NGA---VIKR----LGTKGINPFFQSEEEIQQKLTASLLPQLPE---------GKFNAVYF 63 (291)
T ss_dssp ---CEECCTTCEEEEEEC-SSS---EEEE----EEECCCCTTTSCSTTTTTTTTC----------------------CEE
T ss_pred CEEEEEeccccEEEEEEc-CCe---EEEE----EECCCCCcccCCHHHHHHHHHHHHHHhcCc---------ccccEEEE
Confidence 378999999999999999 774 5533 22332 221224566777777777665422 12456788
Q ss_pred eeeeeeeeeecCceEEECccHHHHHHHHHHhcC--CCceEEEEEechHHHHhcccccCCCcEEEEEEccCcc-eEEEccc
Q 011505 175 TFSFPVMQTSINTGTLVGRDVVEELSRAMAKQG--LDMSVSALVNDTVGTLAGGRYTNKDVVAAVILGTGSN-AAYVERA 251 (484)
Q Consensus 175 tFSfPv~q~~~~~G~l~G~dv~~~L~~al~r~g--l~v~v~alvNDtvatlla~~y~~~~~~iglIlGTG~N-a~yie~~ 251 (484)
..+.++ . .. +.++.+.|++.+ + .| +.|.||++++++++. +.+..+.+|+|||++ ++++.++
T Consensus 64 g~pG~~-~---~~----~~~l~~~l~~~~---~~~~p---v~v~NDa~~aalge~--g~~~~v~v~~GTGi~g~gi~~~G 127 (291)
T 1zxo_A 64 YGAGCT-P---EK----APVLRRAIADSL---PVIGN---IKANSDMLAAAHGLC--GQKAGIACILGTGSNSCFYNGKE 127 (291)
T ss_dssp ECTTCC-T---TT----THHHHHHHHHHS---CCCSC---CEEECSHHHHHHHTT--TTSCBEEEEESSSEEEEEECSSS
T ss_pred EcCCCC-H---HH----HHHHHHHHHHhc---CCCce---EEEECcHHHHHHhhc--CCCCcEEEEeCCChheEEECCCC
Confidence 888775 1 12 246777777766 6 36 469999999999985 567789999999996 5565553
Q ss_pred ccccCcCCCCCCCCcEEEeCCCCCC-CCCCCCCchhhhhhhccCCCCC-cceeeeccccccHHHHHHHHHH----HHHhc
Q 011505 252 QAIPKWHGVPSKSGEMVINMEWGDF-RSSHLSLSEYDNALDAESLNPG-EQIFEKMISGMYLGEIVRRVLL----RMAQE 325 (484)
Q Consensus 252 ~~i~k~~~~~~~~g~miIN~EwG~f-~~~~lp~T~~D~~lD~~s~npg-~q~fEkm~SG~YLgei~R~il~----~~~~~ 325 (484)
+. .---|||.. ++.+. .+. +++.+ ..+++... +..|-+.++..+. ++.+
T Consensus 128 ~~--------------~~aGe~Gh~~~d~g~---~~~------~G~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~l~~- 182 (291)
T 1zxo_A 128 IV--------------SNISPLGFILGDEGS---GAV------LGKLLVGDILKNQL-PATLKEEFLKQFDLTPPEIID- 182 (291)
T ss_dssp EE--------------EECCCCCTTTSCCSS---HHH------HHHHHHHHGGGTCS-CSHHHHHHHHHHTCCHHHHGG-
T ss_pred cE--------------EEeCCCccccCCCch---HHH------HHHHHHHHHHHccC-CChHHHHHHHHhCCCHHHHHH-
Confidence 32 222366533 21100 000 11100 01122211 3444222222110 0000
Q ss_pred cccCCCCCCCCCCCCCccChhhhhhcccCCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011505 326 AAFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELCNIVATRGARLAAAGILGV 405 (484)
Q Consensus 326 ~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~i~~~V~~RaA~l~Aa~iaai 405 (484)
.+.....|. ....-.. ..+++ +..+++|..+++++++.+|.+| .
T Consensus 183 -~~~~~~~~~---~~ia~~a-----------------~~v~~-------------~~GD~~A~~i~~~~~~~La~~i--~ 226 (291)
T 1zxo_A 183 -RVYRQPFPN---RFLASLS-----------------PFIAQ-------------HLEEPAIRQLVMNSFIAFFRRN--V 226 (291)
T ss_dssp -GTTTSSCST---TTSSTTT-----------------HHHHT-------------TTTSTTTTHHHHHHHHHHHTTT--G
T ss_pred -HHhcCCCCH---HHHHHhh-----------------HHHHH-------------hCCCHHHHHHHHHHHHHHHHHH--h
Confidence 000000000 0000001 11111 1234778899999999999999 3
Q ss_pred HHHh-CCCCcCCCCCcceEEEEeceeeccchhHHHHHHHHHHHHhcccCCccEEEEEcCChhHHHHHHHH
Q 011505 406 LKKM-GRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVIEHSNDGSGIGAALLA 474 (484)
Q Consensus 406 i~~~-~~~~~~~~~~~~~~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~~~~~v~i~~~~Dgs~iGAAl~A 474 (484)
++.+ +| ..|.++||+.+. |.+.+++.+++ + .+.+...++++.+|||.+|
T Consensus 227 ~~~~~~p----------~~vvlgGGv~~~---l~~~l~~~l~~---~----~~~i~~~~~a~~~GAa~la 276 (291)
T 1zxo_A 227 MQYDYKQ----------YPVHFIGSIAYC---YKEILQDAARQ---T----GIQIGKILQSPMEGLIQYH 276 (291)
T ss_dssp GGSCTTT----------SCEEECSHHHHH---THHHHHHHTTT---T----TCCEEEECSCTHHHHHTTS
T ss_pred cccCCCC----------ceEEEECcHHHH---HHHHHHHHHhc---C----CcEEeecCCCHHHHHHHHH
Confidence 4433 44 679999999876 78888887765 2 2445567899999999876
|
| >1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5 | Back alignment and structure |
|---|
Probab=99.64 E-value=1.1e-15 Score=152.28 Aligned_cols=272 Identities=14% Similarity=0.052 Sum_probs=151.3
Q ss_pred eEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeec-CCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCceeeee
Q 011505 96 TYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSI-PPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGF 174 (484)
Q Consensus 96 ~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~i-p~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~lGf 174 (484)
.+|+||+|||++|+++++ +|+ ++.+ ... |.+....+.+++++.|.+.+.+.+... ..+...+|+
T Consensus 1 ~~lgiDiGGT~~~~~l~d-~g~---il~~----~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~-------~~~i~~igi 65 (291)
T 1zbs_A 1 MILIGDSGSTKTDWCIAK-EGK---SLGR----FQTSGINPFQQDRNEIDTALRSEVLPAIGQK-------ASSIRAVYF 65 (291)
T ss_dssp CEEEEEECSSEEEEEEEE-TTE---EEEE----EEEECCCTTTSCHHHHHHHHTTTTHHHHTTS-------TTTCCEEEE
T ss_pred CEEEEEeCccceEEEEEe-CCe---EEEE----EECCCCCcccCCHHHHHHHHHHHHHHHhCCC-------cccccEEEE
Confidence 379999999999999999 764 5533 223 222212256778888888777654211 123456888
Q ss_pred eeeeeeeeeecCceEEECccHHHHHHHHHHhcCCCceEEEEEechHHHHhcccccCCCcEEEEEEccCcceEEE-ccccc
Q 011505 175 TFSFPVMQTSINTGTLVGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRYTNKDVVAAVILGTGSNAAYV-ERAQA 253 (484)
Q Consensus 175 tFSfPv~q~~~~~G~l~G~dv~~~L~~al~r~gl~v~v~alvNDtvatlla~~y~~~~~~iglIlGTG~Na~yi-e~~~~ 253 (484)
..+.|+ ... +.++.+.|++.+ +.. ..+.|.||++++++++. +.+..+.+|+|||++++.+ .+++.
T Consensus 66 g~pG~~----~~~----~~~l~~~l~~~~---~~~-~pv~v~NDa~~aa~ge~--g~~~~v~v~~GTGigg~~i~~~G~~ 131 (291)
T 1zbs_A 66 YGAGCT----PAK----APMLNEALDSML---PHC-DRIEVAGDMLGAARALC--GDSEGIACILGTGSNSCLFDGREIK 131 (291)
T ss_dssp EETTCC----TTT----HHHHHHHHHHHS---TTC-SEEEEECHHHHHHHHHT--TTSCEEEEEESSSEEEEEECSSSEE
T ss_pred ECCCCC----hHH----HHHHHHHHHHhc---CCC-CcEEEeCcHHHHHHhhc--CCCCcEEEEecCChheEEECCCCcE
Confidence 888876 122 246667777666 530 12679999999999984 5678899999999985554 44332
Q ss_pred ccCcCCCCCCCCcEEEeCCCCCCCCCCCCCchhhhhhhccCCCCC-cceeeeccccccHHHHHHHHHHHHHhccccCCCC
Q 011505 254 IPKWHGVPSKSGEMVINMEWGDFRSSHLSLSEYDNALDAESLNPG-EQIFEKMISGMYLGEIVRRVLLRMAQEAAFFGDT 332 (484)
Q Consensus 254 i~k~~~~~~~~g~miIN~EwG~f~~~~lp~T~~D~~lD~~s~npg-~q~fEkm~SG~YLgei~R~il~~~~~~~~lF~~~ 332 (484)
. .+++.|||+.+. .+.|+ +++.+ ..+++... +..|-+.++. . |+
T Consensus 132 ~-----~aGe~G~~~~d~-g~~~~----------------~G~~~~~~~~~~~~-~~~l~~~~~~---~-------~~-- 176 (291)
T 1zbs_A 132 A-----NVSPLGYILGDE-GSGAV----------------LGRLFIGSLLKGQM-PEGLCEAFLQ---E-------YG-- 176 (291)
T ss_dssp E-----ECCCCHHHHCCT-TSHHH----------------HHHHHHHHHHTTCS-CTTHHHHHHH---H-------TT--
T ss_pred E-----EeCCCccccCCC-chHHH----------------HHHHHHHHHHHccC-CChHHHHHHH---H-------hC--
Confidence 1 122333333321 11110 00000 00111111 2222111111 0 00
Q ss_pred CCCCCCCCCccChhhh-hhcccCCCC--ChH-HHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011505 333 VPPKLEVPFALRTPDM-SAMHHDTSS--DLK-VVETKLKDILEISSTSLSMRKTIVELCNIVATRGARLAAAGILGVLKK 408 (484)
Q Consensus 333 ~~~~l~~~~~l~t~~l-s~i~~d~~~--~~~-~~~~il~~~~~~~~~~~~d~~~~~~i~~~V~~RaA~l~Aa~iaaii~~ 408 (484)
.+...+ ..+..+..+ ++. ....+++ +..+.+|..+++++++.+|.+| .++.
T Consensus 177 ----------~~~~~l~~~~~~~~~~~~~ia~~a~~v~~-------------~~GD~~A~~i~~~~~~~La~~i--~~~~ 231 (291)
T 1zbs_A 177 ----------LTSADIIESVYRKPFPNRFLAGFSPFIAQ-------------HLDIPAVYSLVQNSFDDFLVRN--VLRY 231 (291)
T ss_dssp ----------CCHHHHHHHHHHSSCHHHHHHTTHHHHHT-------------TTTSHHHHHHHHHHHHHHHHHH--TGGG
T ss_pred ----------cCHHHHHHHHHcCCCCHHHHHHhhHHHHH-------------hCCCHHHHHHHHHHHHHHHHHH--hccc
Confidence 000000 000000000 000 0111111 2345899999999999999999 4444
Q ss_pred h-CCCCcCCCCCcceEEEEeceeeccchhHHHHHHHHHHHHhcccCCccEEEEEcCChhHHHHHHHHHH
Q 011505 409 M-GRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVIEHSNDGSGIGAALLAAS 476 (484)
Q Consensus 409 ~-~~~~~~~~~~~~~~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~~~~~v~i~~~~Dgs~iGAAl~Aa~ 476 (484)
+ +| ..|.++||+.+. |.+.+++.+++.. +++....++..+||+.+|.-
T Consensus 232 ~~~p----------~~vvlgGGv~~~---~~~~l~~~l~~~~-------~~i~~~~~a~~~GA~~la~~ 280 (291)
T 1zbs_A 232 NRPD----------LPLHFIGSVAFH---YREVLSSVIKKRG-------LTLGSVLQSPMEGLIQYHHN 280 (291)
T ss_dssp CCTT----------SCEEEESHHHHH---THHHHHHHHHHTT-------CCEEEEESCSHHHHHHHHHH
T ss_pred CCCC----------ceEEEECchHHh---hHHHHHHHHHHcC-------CeecccCcCHHHHHHHHHHh
Confidence 4 55 679999999876 5677777776543 12344559999999999864
|
| >1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5 | Back alignment and structure |
|---|
Probab=99.63 E-value=7.3e-15 Score=147.04 Aligned_cols=274 Identities=16% Similarity=0.077 Sum_probs=153.6
Q ss_pred eEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeec-CCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCc--eee
Q 011505 96 TYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSI-PPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQ--REL 172 (484)
Q Consensus 96 ~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~i-p~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~--~~l 172 (484)
++|+||+|||++|+++++++|+ ++.+. .. |... ..+.+++++.+++.|.+++++.+.. ..+. ..+
T Consensus 12 ~~lGiDiGgT~i~~~l~d~~G~---il~~~----~~~~~~~-~~~~~~~~~~l~~~i~~~l~~~~~~----~~~i~~~~i 79 (305)
T 1zc6_A 12 YLIGVDGGGTGTRIRLHASDGT---PLAMA----EGGASAL-SQGIAKSWQAVLSTLEAAFQQAGLP----AAPASACAI 79 (305)
T ss_dssp EEEEEEECSSCEEEEEEETTCC---EEEEE----EESCCCG-GGCHHHHHHHHHHHHHHHHHHTTCC----CCCGGGEEE
T ss_pred EEEEEEcCccceEEEEEcCCCC---EEEEE----eCCCCCc-ccCHHHHHHHHHHHHHHHHHhcCCC----hhhhccceE
Confidence 7899999999999999999875 55332 22 2222 2356889999999999999875432 1222 568
Q ss_pred eeeeeeeeeeeecCceEEECccHHHHHHHHHHhcCCCceEEEEEechHHHHhcccccCCCcEEEEEEccCcceEEEc-cc
Q 011505 173 GFTFSFPVMQTSINTGTLVGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRYTNKDVVAAVILGTGSNAAYVE-RA 251 (484)
Q Consensus 173 GftFSfPv~q~~~~~G~l~G~dv~~~L~~al~r~gl~v~v~alvNDtvatlla~~y~~~~~~iglIlGTG~Na~yie-~~ 251 (484)
|++++.|++.. .+ ..|++.|.+ ++| +.|.||+++.++++. ..+..+.+++|||++++.+. ++
T Consensus 80 gig~pG~v~~~---~~--------~~l~~~~~~-~~p---v~v~NDa~aaa~ge~--~~~~~v~v~~GTGigg~~i~~~G 142 (305)
T 1zc6_A 80 GLGLSGVHNRQ---WA--------GEFESQAPG-FAR---LSLATDGYTTLLGAH--GGQPGIIVALGTGSIGEALYPDG 142 (305)
T ss_dssp EEEESCCCTTS---HH--------HHHHHTCCC-CSE---EEEECHHHHHHHHHT--TTSSEEEEEESSSEEEEEECTTS
T ss_pred EEEecCCCchH---HH--------HHHHHhCCC-Cce---EEEECCHHHHHHhhc--CCCCeEEEEecCCeEEEEEeCCC
Confidence 88999998732 22 113332211 344 579999999999873 34678899999999655554 33
Q ss_pred ccccCcCCCCCCCCcEEEeCCCCCCCCCCCCCchhhhhhhc-cCCCCCcceeeeccccccHHHHHHHHHHHHHhccccCC
Q 011505 252 QAIPKWHGVPSKSGEMVINMEWGDFRSSHLSLSEYDNALDA-ESLNPGEQIFEKMISGMYLGEIVRRVLLRMAQEAAFFG 330 (484)
Q Consensus 252 ~~i~k~~~~~~~~g~miIN~EwG~f~~~~lp~T~~D~~lD~-~s~npg~q~fEkm~SG~YLgei~R~il~~~~~~~~lF~ 330 (484)
+. ..+++.|||.++.. +.++..+...-+.=...|. .|..+..+++|...+ ...-.+++.+
T Consensus 143 ~~-----~~aGe~Gh~~~d~g-~~~~iG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~l~~~~------------ 203 (305)
T 1zc6_A 143 SH-----REAGGWGYPSGDEA-SGAWLGQRAAQLTQMALDGRHSHSPLTRAVLDFVG-GDWQAMMAWN------------ 203 (305)
T ss_dssp CE-----EEESCCCTTTSCTT-SHHHHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHT-SSHHHHHHHH------------
T ss_pred cE-----EEecCcccccCCCc-hHHHHHHHHHHHHHHHHhCCCCCChHHHHHHHHHC-cCHHHHHHHH------------
Confidence 21 11123333333211 0000000000000000010 011111122222222 0011111110
Q ss_pred CCCCCCCCCCCccChhhhhhcccCCCCChH-HHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 011505 331 DTVPPKLEVPFALRTPDMSAMHHDTSSDLK-VVETKLKDILEISSTSLSMRKTIVELCNIVATRGARLAAAGILGVLKKM 409 (484)
Q Consensus 331 ~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~-~~~~il~~~~~~~~~~~~d~~~~~~i~~~V~~RaA~l~Aa~iaaii~~~ 409 (484)
.......+. ....+++. + ..+.+|..+++++++++|.+|+++++.
T Consensus 204 ---------------------~~~~~~~~~~~~~~v~~~-----------a-~GD~~A~~i~~~~~~~L~~~l~~l~~~- 249 (305)
T 1zc6_A 204 ---------------------GRATPAQFARLAPLVLSA-----------A-RVDPEADALLRQAGEDAWAIARALDPQ- 249 (305)
T ss_dssp ---------------------HTCCHHHHHTTHHHHHHH-----------T-TTCHHHHHHHHHHHHHHHHHHHHHCTT-
T ss_pred ---------------------hccCHHHHHHHHHHHHHH-----------c-CCCHHHHHHHHHHHHHHHHHHHHHhcC-
Confidence 000000000 12233332 3 456899999999999999999999986
Q ss_pred CCCCcCCCCCcceEEEEeceeecc-chhHHHHHHHHHHHHhcccCCccEEEEEcCChhHHHHHHHHH
Q 011505 410 GRDAAKDGDKQKTVIAMDGGLYEH-YAEYSKCLENTLEELLGEELFKNIVIEHSNDGSGIGAALLAA 475 (484)
Q Consensus 410 ~~~~~~~~~~~~~~I~vdGsv~~~-~p~f~~~l~~~l~~l~~~~~~~~v~i~~~~Dgs~iGAAl~Aa 475 (484)
+| ..|.++||+... .|.|.+.+++.+ ...++.+.+|||++|.
T Consensus 250 ~p----------~~VvlgGgv~~~~~~~l~~~l~~~i--------------~~~~~~~~~GAa~la~ 292 (305)
T 1zc6_A 250 DE----------LPVALCGGLGQALRDWLPPGFRQRL--------------VAPQGDSAQGALLLLQ 292 (305)
T ss_dssp CC----------SCEEEESHHHHHTGGGSCHHHHHHC--------------CCCSSCHHHHHHHHTC
T ss_pred CC----------CeEEEECCchHhHHHHHHHHHHhhc--------------cCCCCCHHHHHHHHHh
Confidence 66 579999999864 566777766531 1246888999998874
|
| >3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum} | Back alignment and structure |
|---|
Probab=98.42 E-value=4.3e-05 Score=81.53 Aligned_cols=84 Identities=18% Similarity=0.182 Sum_probs=55.9
Q ss_pred CceeeEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeec--C-CCccccCcchhHHHHHHHHHHHHhhcccccccCCCC
Q 011505 92 DEKGTYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSI--P-PHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGR 168 (484)
Q Consensus 92 ~E~G~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~i--p-~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~ 168 (484)
....++|+||+|+|++|+++++.+|+ ++...+..++. | ......+++++++.+.+++++.+++.+... .+
T Consensus 4 ~~~~~~lgIDiGtts~k~~l~d~~G~---il~~~~~~~~~~~p~~g~~e~dp~~~~~~i~~~i~~~~~~~~~~~----~~ 76 (508)
T 3ifr_A 4 AQGRQVIGLDIGTTSTIAILVRLPDT---VVAVASRPTTLSSPHPGWAEEDPAQWWDNARAVLAELKTTAGESD----WR 76 (508)
T ss_dssp ---CEEEEEEECSSEEEEEEEETTTE---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHHCGGG----CC
T ss_pred ccCCEEEEEEecCcceEEEEECCCCC---EEEEEEEecceecCCCCceEECHHHHHHHHHHHHHHHHHhcCCCh----hh
Confidence 34558999999999999999998774 55443322321 1 111234678999999999999987755331 34
Q ss_pred ceeeeeeeee----eeee
Q 011505 169 QRELGFTFSF----PVMQ 182 (484)
Q Consensus 169 ~~~lGftFSf----Pv~q 182 (484)
...||++-.. |+|.
T Consensus 77 I~~Igis~~~~~~v~~D~ 94 (508)
T 3ifr_A 77 PGGICVTGMLPAVVLLDD 94 (508)
T ss_dssp EEEEEEEECSSCBEEECT
T ss_pred eEEEEEECCCCcEEEECC
Confidence 5667777666 6663
|
| >3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A* | Back alignment and structure |
|---|
Probab=97.98 E-value=0.00073 Score=71.91 Aligned_cols=61 Identities=11% Similarity=0.156 Sum_probs=44.1
Q ss_pred eeEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeec--C-CCccccCcchhHHHHHHHHHHHHhhc
Q 011505 95 GTYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSI--P-PHLMTGTSDALFDYIAAELAKFVSQE 158 (484)
Q Consensus 95 G~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~i--p-~~~~~~~~~~lfd~Ia~~i~~fl~~~ 158 (484)
.++|+||+|+|++|+++++.+|+ ++...+..++. | ......+++++++.+.+++++.+++.
T Consensus 4 ~~~lgIDiGtts~K~~l~d~~G~---il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~~ 67 (504)
T 3ll3_A 4 KYIIGMDVGTTATKGVLYDINGK---AVASVSKGYPLIQTKVGQAEEDPKLIFDAVQEIIFDLTQKI 67 (504)
T ss_dssp EEEEEEEECSSEEEEEEEETTSC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHTC
T ss_pred CEEEEEEecCCceEEEEEcCCCC---EEEEEEeecceecCCCCcEEECHHHHHHHHHHHHHHHHHhC
Confidence 47999999999999999998775 55443332321 1 11223457899999999999998764
|
| >4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A | Back alignment and structure |
|---|
Probab=97.38 E-value=0.002 Score=62.50 Aligned_cols=109 Identities=14% Similarity=0.126 Sum_probs=58.7
Q ss_pred eEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCceeeeee
Q 011505 96 TYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGFT 175 (484)
Q Consensus 96 ~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~lGft 175 (484)
++|+||+|+||.++++++-+++ ++.... .++ +...+.. ++.+++.+++.+... . ...+.+
T Consensus 2 ~~lGID~GsT~tk~av~d~~~~---il~~~~----~~~----g~~~e~a---~~vl~~~~~~a~~~~----~--~~~~~a 61 (276)
T 4ehu_A 2 YTMGLDIGSTASKGVILKNGED---IVASET----ISS----GTGTTGP---SRVLEKLYGKTGLAR----E--DIKKVV 61 (276)
T ss_dssp EEEEEEECSSCEEEEEEETTTE---EEEEEE----ESC----CTTSSHH---HHHHHHHHHHHCCCG----G--GEEEEE
T ss_pred eEEEEEcCccEEEEEEEECCCe---EEEEEE----ecC----CCCHHHH---HHHHHHHHHHCCCcc----h--hccccc
Confidence 5899999999999999986553 554321 222 2222222 234555555544321 1 111111
Q ss_pred eeeeeeeeecCceEEECccHHHHHHHHHHhcCCCceEEEEEechHHHHhcccccCCCcEEEEEEccCcc-eEEEc
Q 011505 176 FSFPVMQTSINTGTLVGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRYTNKDVVAAVILGTGSN-AAYVE 249 (484)
Q Consensus 176 FSfPv~q~~~~~G~l~G~dv~~~L~~al~r~gl~v~v~alvNDtvatlla~~y~~~~~~iglIlGTG~N-a~yie 249 (484)
+.. .+ . + ++ +.+. -.+|...|..++..+..++...-+.+|.|+. ..++.
T Consensus 62 ~t~--------~~----~-~------a~---~~~~---~~Vne~~aha~a~~~~~~~~~~vl~lgG~~~~~~~~~ 111 (276)
T 4ehu_A 62 VTG--------YG----R-M------NY---SDAD---KQISELSCHARGVNFIIPETRTIIDIGGQDAKVLKLD 111 (276)
T ss_dssp EES--------TT----G-G------GC---CSCS---EECCHHHHHHHHHHHHSTTCCEEEEECSSCEEEEEEC
T ss_pred cCc--------hH----H-H------Hh---hCCC---cccchHHHHHHHHHHhCCCCCeEEEEcCCCceEEEEE
Confidence 111 00 0 0 11 2333 3789999999988877666655566666554 44443
|
| >1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5 | Back alignment and structure |
|---|
Probab=97.33 E-value=0.0017 Score=63.37 Aligned_cols=46 Identities=26% Similarity=0.307 Sum_probs=30.8
Q ss_pred EEEEeceeeccchhHHHHHHHHHHHHhcccCCccEEEEE-cCChhHHHHHHHHHHh
Q 011505 423 VIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVIEH-SNDGSGIGAALLAASH 477 (484)
Q Consensus 423 ~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~~~~~v~i~~-~~Dgs~iGAAl~Aa~~ 477 (484)
.|.+.||+. +.|.+++.+.+.+.. .|.+-. .+..+.+|||++|+-.
T Consensus 211 ~i~~~GG~a-~n~~~~~~~~~~lg~--------~v~~p~~~~~~~AlGAAl~A~~~ 257 (270)
T 1hux_A 211 DVVMTGGVA-QNYGVRGALEEGLGV--------EIKTSPLAQYNGALGAALYAYKK 257 (270)
T ss_dssp SEEEESGGG-GCHHHHHHHHHHHCS--------CEECCGGGGGHHHHHHHHHHHHH
T ss_pred eEEEeCccc-cCHHHHHHHHHHHCC--------CeEeCCCcchHhHHHHHHHHHHh
Confidence 477777765 588888888776631 233222 3446899999998653
|
| >4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0031 Score=67.37 Aligned_cols=80 Identities=14% Similarity=0.171 Sum_probs=55.0
Q ss_pred eeEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeee--cCC-CccccCcchhHHHHHHHHHHHHhhcccccccCCCCcee
Q 011505 95 GTYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVS--IPP-HLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRE 171 (484)
Q Consensus 95 G~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~--ip~-~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~ 171 (484)
.++|+||+|+|++|+++++.+|+ ++...+..++ .|. .....+++++++.+.++|++.+++.+... .+...
T Consensus 26 ~~~lgIDiGtts~k~~l~d~~G~---il~~~~~~~~~~~p~~g~~e~dp~~~~~~i~~~i~~~~~~~~~~~----~~I~~ 98 (520)
T 4e1j_A 26 GYILAIDQGTTSTRAIVFDGNQK---IAGVGQKEFKQHFPKSGWVEHDPEEIWQTVVSTVKEAIEKSGITA----NDIAA 98 (520)
T ss_dssp CEEEEEEECSSEEEEEEECTTSC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHTTTCCG----GGEEE
T ss_pred CeEEEEEeCCcceEEEEECCCCC---EEEEEEEecccccCCCCcEEECHHHHHHHHHHHHHHHHHhcCCCc----ccEEE
Confidence 47999999999999999998775 5544332222 121 11234678999999999999988754321 34566
Q ss_pred eeeeeee----eee
Q 011505 172 LGFTFSF----PVM 181 (484)
Q Consensus 172 lGftFSf----Pv~ 181 (484)
||++... |++
T Consensus 99 Igis~~g~~~v~~D 112 (520)
T 4e1j_A 99 IGITNQRETVVVWD 112 (520)
T ss_dssp EEEEECSSCEEEEE
T ss_pred EEEeCCcceEEEEE
Confidence 7777655 676
|
| >3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0035 Score=66.62 Aligned_cols=81 Identities=17% Similarity=0.180 Sum_probs=53.7
Q ss_pred eeeEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeec--C-CCccccCcchhHHHHHHHHHHHHhhcccccccCCCCce
Q 011505 94 KGTYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSI--P-PHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQR 170 (484)
Q Consensus 94 ~G~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~i--p-~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~ 170 (484)
..++|+||+|+|++|+++++.+|+ ++...+..++. | +.....+++++++.+.+++++.+++.+... .+..
T Consensus 4 ~~~~lgIDiGtts~k~~l~d~~G~---il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~~~~~~----~~I~ 76 (506)
T 3h3n_X 4 KNYVMAIDQGTTSSRAIIFDRNGK---KIGSSQKEFPQYFPKSGWVEHNANEIWNSVQSVIAGAFIESGIRP----EAIA 76 (506)
T ss_dssp CCEEEEEEECSSEEEEEEEETTSC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHHTCCG----GGEE
T ss_pred CCEEEEEEcCCCceEEEEECCCCC---EEEEEEEecCccCCCCCcEEECHHHHHHHHHHHHHHHHHHcCCCh----hheE
Confidence 348999999999999999998775 55443322221 1 112234578999999999999988754321 2345
Q ss_pred eeeeeee----eeee
Q 011505 171 ELGFTFS----FPVM 181 (484)
Q Consensus 171 ~lGftFS----fPv~ 181 (484)
.||++-. .|+|
T Consensus 77 ~Igis~~~~~~v~~D 91 (506)
T 3h3n_X 77 GIGITNQRETTVVWD 91 (506)
T ss_dssp EEEEEECSSCBEEEE
T ss_pred EEEeeCCcccEEEEe
Confidence 5555532 3666
|
| >2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0035 Score=66.34 Aligned_cols=79 Identities=19% Similarity=0.187 Sum_probs=53.8
Q ss_pred eEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeec--CC-CccccCcchhHHHHHHHHHHHHhhcccccccCCCCceee
Q 011505 96 TYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSI--PP-HLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQREL 172 (484)
Q Consensus 96 ~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~i--p~-~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~l 172 (484)
++|+||+|||++|+++++.+|+ ++......++. |. .....+.+++++.+.+++++.+++.+... .+...|
T Consensus 3 ~~lgiDiGtT~~k~~l~d~~g~---i~~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~----~~i~~I 75 (495)
T 2dpn_A 3 FLLALDQGTTSSRAILFTLEGR---PVAVAKREFRQLYPKPGWVEHDPLEIWETTLWAAREVLRRAGAEA----GEVLAL 75 (495)
T ss_dssp CEEEEEECSSEEEEEEECTTSC---EEEEEEEECCEECSSTTCCEECHHHHHHHHHHHHHHHHHHTTCCG----GGCCEE
T ss_pred EEEEEeeCCcceEEEEECCCCC---EEEEEEEeeceecCCCCcEeeCHHHHHHHHHHHHHHHHHhcCCCc----ccEEEE
Confidence 6899999999999999998775 55443322221 21 11233578899999999999988754321 235667
Q ss_pred eeeee----eeee
Q 011505 173 GFTFS----FPVM 181 (484)
Q Consensus 173 GftFS----fPv~ 181 (484)
|++.. .|++
T Consensus 76 gis~~~~~~~~vD 88 (495)
T 2dpn_A 76 GITNQRETTLLWD 88 (495)
T ss_dssp EEEECSSCBEEEE
T ss_pred EEeCCCccEEEEE
Confidence 77766 5777
|
| >2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A* | Back alignment and structure |
|---|
Probab=96.63 E-value=0.0051 Score=65.26 Aligned_cols=79 Identities=5% Similarity=-0.070 Sum_probs=53.4
Q ss_pred eEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeec--CC-CccccCcchhHHHHHHHHHHHHhhc--ccccccCCCCce
Q 011505 96 TYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSI--PP-HLMTGTSDALFDYIAAELAKFVSQE--SEEFKLSPGRQR 170 (484)
Q Consensus 96 ~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~i--p~-~~~~~~~~~lfd~Ia~~i~~fl~~~--~~~~~~~~~~~~ 170 (484)
++|+||+|||++|+++++.+|+ ++......++. |. .....+.+++++.+.++|.+.+++. +.. ..+..
T Consensus 5 ~~lgIDiGtT~~k~~l~d~~g~---i~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~~----~~~i~ 77 (503)
T 2w40_A 5 VILSIDQSTQSTKVFFYDEELN---IVHSNNLNHEQKCLKPGWYEHDPIEIMTNLYNLMNEGIKVLKDKYT----SVIIK 77 (503)
T ss_dssp EEEEEEECSSEEEEEEEETTCC---EEEEEEEECCCBCCSTTCCEECHHHHHHHHHHHHHHHHHHHHHHSS----SCEEE
T ss_pred EEEEEEeCCcceEEEEECCCCC---EEEEEEEeeeeecCCCCcEEECHHHHHHHHHHHHHHHHHHhhcCCC----ccceE
Confidence 6899999999999999998775 55443322221 11 1112357899999999999998764 321 12356
Q ss_pred eeeeeee----eeee
Q 011505 171 ELGFTFS----FPVM 181 (484)
Q Consensus 171 ~lGftFS----fPv~ 181 (484)
.||++.. .|++
T Consensus 78 ~Igis~~~~~~~~~D 92 (503)
T 2w40_A 78 CIGITNQRETVIIWD 92 (503)
T ss_dssp EEEEEECSSCEEEEE
T ss_pred EEEEcCCcceEEEEE
Confidence 6777766 4777
|
| >3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A* | Back alignment and structure |
|---|
Probab=96.62 E-value=0.0049 Score=65.36 Aligned_cols=80 Identities=13% Similarity=0.191 Sum_probs=53.8
Q ss_pred eeEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeec--CC-CccccCcchhHHHHHHHHHHHHhhcccccccCCCCcee
Q 011505 95 GTYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSI--PP-HLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRE 171 (484)
Q Consensus 95 G~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~i--p~-~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~ 171 (484)
.++|+||+|+|++|+++++.+|+ ++...+..++. |. .....+++++++.+.+++++.+++.+... .+...
T Consensus 6 ~~~lgIDiGtts~k~~l~d~~G~---il~~~~~~~~~~~p~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~----~~I~~ 78 (501)
T 3g25_A 6 KYILSIDQGTTSSRAILFNQKGE---IAGVAQREFKQYFPQSGWVEHDANEIWTSVLAVMTEVINENDVRA----DQIAG 78 (501)
T ss_dssp CEEEEEEECSSEEEEEEECTTSC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHTTTCCG----GGEEE
T ss_pred cEEEEEEeCccceEEEEEcCCCC---EEEEEEeecccccCCCCcEEECHHHHHHHHHHHHHHHHHhcCCCc----ccEEE
Confidence 37999999999999999998775 55443332321 11 11234578999999999999988754321 23455
Q ss_pred eeeeee----eeee
Q 011505 172 LGFTFS----FPVM 181 (484)
Q Consensus 172 lGftFS----fPv~ 181 (484)
||++-. .|++
T Consensus 79 Igis~~~~~~v~~D 92 (501)
T 3g25_A 79 IGITNQRETTVVWD 92 (501)
T ss_dssp EEEEECSSCEEEEE
T ss_pred EEEECCcCcEEEEE
Confidence 666543 4676
|
| >3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y* | Back alignment and structure |
|---|
Probab=96.62 E-value=0.0035 Score=67.00 Aligned_cols=77 Identities=18% Similarity=0.230 Sum_probs=53.1
Q ss_pred CceeeEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeec--CC-CccccCcchhHHHHHHHHHHHHhhcccccccCCCC
Q 011505 92 DEKGTYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSI--PP-HLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGR 168 (484)
Q Consensus 92 ~E~G~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~i--p~-~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~ 168 (484)
+|+.+|||||+|.|+.|+++++.+|+ ++...+.+++. |. ....-+++++++-+.++|++.+++.+.+. .+
T Consensus 1 tekkYvlgID~GTss~Ka~l~d~~G~---~va~~~~~~~~~~p~~G~~Eqdp~~~w~~~~~~i~~~l~~~~~~~----~~ 73 (526)
T 3ezw_A 1 TEKKYIVALDQGTTSSRAVVMDHDAN---IISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLVEVLAKADISS----DQ 73 (526)
T ss_dssp --CCEEEEEEECSSEEEEEEECTTCC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHHTCCG----GG
T ss_pred CCceEEEEEEccccceeeeEEcCCCC---EEEEEEEecCcccCCCCcEEECHHHHHHHHHHHHHHHHHHcCCCh----hh
Confidence 47889999999999999999998775 55443333321 21 12233678999999999999998766432 34
Q ss_pred ceeeeee
Q 011505 169 QRELGFT 175 (484)
Q Consensus 169 ~~~lGft 175 (484)
+..||||
T Consensus 74 I~aIgis 80 (526)
T 3ezw_A 74 IAAIGIT 80 (526)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 5666665
|
| >2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP} | Back alignment and structure |
|---|
Probab=96.52 E-value=0.0055 Score=65.06 Aligned_cols=77 Identities=10% Similarity=0.112 Sum_probs=53.5
Q ss_pred eEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeecCCC-----ccccCcchhHHHHHHHHHHHHhhcccccccCCCCce
Q 011505 96 TYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPH-----LMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQR 170 (484)
Q Consensus 96 ~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~ip~~-----~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~ 170 (484)
++|+||+|+|++|+++++.+|+ ++.... .+.|.. ....+++++++.+.+++.+.+++.+... .+..
T Consensus 3 ~~lgiDiGtts~k~~l~d~~G~---i~~~~~--~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~----~~i~ 73 (504)
T 2d4w_A 3 YVLAIDQGTTSSRAIVFDHSGE---IYSTGQ--LEHDQIFPRAGWVEHNPEQIWNNVREVVGLALTRGNLTH----EDIA 73 (504)
T ss_dssp EEEEEEECSSEEEEEEECTTSC---EEEEEE--EECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHTTCCG----GGEE
T ss_pred EEEEEecCCcceEEEEECCCCC---EEEEEE--EecceecCCCCceeECHHHHHHHHHHHHHHHHHHcCCCc----ccEE
Confidence 6899999999999999998775 554433 233321 1123578899999999999988754321 2356
Q ss_pred eeeeeeee----eee
Q 011505 171 ELGFTFSF----PVM 181 (484)
Q Consensus 171 ~lGftFSf----Pv~ 181 (484)
.||++... |++
T Consensus 74 ~Igis~~g~~~v~vD 88 (504)
T 2d4w_A 74 AVGITNQRETAVVWD 88 (504)
T ss_dssp EEEEEECSSCBEEEE
T ss_pred EEEEeCCCCeEEEEE
Confidence 67777664 676
|
| >3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A* | Back alignment and structure |
|---|
Probab=96.46 E-value=0.0052 Score=66.06 Aligned_cols=74 Identities=19% Similarity=0.379 Sum_probs=50.4
Q ss_pred eeEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeec--C-CCccccCcchhHHHHHHHHHHHHhhcccccccCCCCcee
Q 011505 95 GTYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSI--P-PHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRE 171 (484)
Q Consensus 95 G~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~i--p-~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~ 171 (484)
.++|+||+|+|++|+++++.+|+ ++...+..+++ | ......+++++++.+.++|++.+++.+... .+...
T Consensus 5 ~~~lgIDiGtts~ka~l~d~~G~---il~~~~~~~~~~~p~~g~~eqdp~~~~~~~~~~i~~~~~~~~~~~----~~I~~ 77 (554)
T 3l0q_A 5 SYFIGVDVGTGSARAGVFDLQGR---MVGQASREITMFKPKADFVEQSSENIWQAVCNAVRDAVNQADINP----IQVKG 77 (554)
T ss_dssp CEEEEEEECSSEEEEEEEETTSC---EEEEEEEECCCEEEETTEEEECHHHHHHHHHHHHHHHHHHHTCCG----GGEEE
T ss_pred cEEEEEEECcccEEEEEECCCCC---EEEEEEEecccccCCCCccccCHHHHHHHHHHHHHHHHHHcCCCH----hHEEE
Confidence 48999999999999999998775 55443322221 1 112234678999999999999998754321 23455
Q ss_pred eeee
Q 011505 172 LGFT 175 (484)
Q Consensus 172 lGft 175 (484)
||++
T Consensus 78 Igis 81 (554)
T 3l0q_A 78 LGFD 81 (554)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 6654
|
| >2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis} | Back alignment and structure |
|---|
Probab=96.27 E-value=0.009 Score=63.23 Aligned_cols=76 Identities=14% Similarity=0.132 Sum_probs=50.3
Q ss_pred eEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeec--CC-CccccCcchhHHHHHHHHHHHHhhcccccccCCCCceee
Q 011505 96 TYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSI--PP-HLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQREL 172 (484)
Q Consensus 96 ~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~i--p~-~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~l 172 (484)
++|+||+|||++|+++++.+|+ ++......++. |. .....+++++++.+.+++.+.+++.+... .+...|
T Consensus 4 ~~lgiDiGtt~~k~~l~d~~g~---~~~~~~~~~~~~~p~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~----~~i~~I 76 (497)
T 2zf5_O 4 FVLSLDEGTTSARAIIFDRESN---IHGIGQYEFPQHYPRPGWVEHNPEEIWDAQLRAIKDAIQSARIEP----NQIAAI 76 (497)
T ss_dssp EEEEEEECSSEEEEEEECTTCC---EEEEEEEECCCBCCSTTCCEECHHHHHHHHHHHHHHHHHHHTCCG----GGEEEE
T ss_pred EEEEEecCCchhEEEEECCCCC---EEEEEEeccceecCCCCcEEECHHHHHHHHHHHHHHHHHhcCCCc----ccEEEE
Confidence 6899999999999999998764 55443322221 11 11123578899999999999987754321 234556
Q ss_pred eeeeee
Q 011505 173 GFTFSF 178 (484)
Q Consensus 173 GftFSf 178 (484)
|++...
T Consensus 77 gis~~~ 82 (497)
T 2zf5_O 77 GVTNQR 82 (497)
T ss_dssp EEEECS
T ss_pred EEecCC
Confidence 666553
|
| >2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A | Back alignment and structure |
|---|
Probab=96.26 E-value=0.0093 Score=62.88 Aligned_cols=78 Identities=14% Similarity=0.279 Sum_probs=52.0
Q ss_pred eEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeec--CC-CccccCcchhHHHHHHHHHHHHhhcccccccCCCCceee
Q 011505 96 TYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSI--PP-HLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQREL 172 (484)
Q Consensus 96 ~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~i--p~-~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~l 172 (484)
+||+||+|||++|+++++.+|+ ++...+..+++ |+ .....+++++++.+.+++++.+++.. ..+...|
T Consensus 1 ~~lgiDiGtt~~k~~l~d~~g~---~l~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~~~------~~~i~~I 71 (484)
T 2itm_A 1 MYIGIDLGTSGVKVILLNEQGE---VVAAQTEKLTVSRPHPLWSEQDPEQWWQATDRAMKALGDQHS------LQDVKAL 71 (484)
T ss_dssp CEEEEEECSSEEEEEEECTTSC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHSC------CTTCCEE
T ss_pred CEEEEEecCcccEEEEECCCCC---EEEEEEeccccccCCCCCEeECHHHHHHHHHHHHHHHHHhCC------ccceEEE
Confidence 3799999999999999998765 55443322221 11 11123578899999999999887642 1235667
Q ss_pred eeeeee----eeee
Q 011505 173 GFTFSF----PVMQ 182 (484)
Q Consensus 173 GftFSf----Pv~q 182 (484)
|++... +++.
T Consensus 72 gis~~~~~~v~~D~ 85 (484)
T 2itm_A 72 GIAGQMHGATLLDA 85 (484)
T ss_dssp EEEECSSCBEEECT
T ss_pred EEcCCcCcEEEECC
Confidence 777666 6663
|
| >3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A* | Back alignment and structure |
|---|
Probab=96.25 E-value=0.0085 Score=63.74 Aligned_cols=74 Identities=12% Similarity=0.091 Sum_probs=49.2
Q ss_pred eeEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeec--C-CCccccCcchhHHHHHHHHHHHHhhcccccccCCCCcee
Q 011505 95 GTYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSI--P-PHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRE 171 (484)
Q Consensus 95 G~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~i--p-~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~ 171 (484)
.++|+||+|+|++|+++++.+|+ ++...+..+++ | +.....+++++++.+.+++++.+ +.+.. ..+...
T Consensus 5 ~~~lgIDiGtts~k~~l~d~~G~---il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~-~~~~~----~~~I~~ 76 (511)
T 3hz6_A 5 FYIATFDIGTTEVKAALADRDGG---LHFQRSIALETYGDGNGPVEQDAGDWYDAVQRIASSWW-QSGVD----ARRVSA 76 (511)
T ss_dssp CEEEEEEECSSEEEEEEECTTSC---EEEEEEEECCCBSTTSSCCEECHHHHHHHHHHHHHHHH-TTTCC----GGGEEE
T ss_pred cEEEEEEeCCCceEEEEECCCCC---EEEEEEeecceecCCCCCEEECHHHHHHHHHHHHHHHH-hcCCC----hhHeEE
Confidence 37999999999999999998775 55443322221 1 11223467899999999999998 54322 123455
Q ss_pred eeeee
Q 011505 172 LGFTF 176 (484)
Q Consensus 172 lGftF 176 (484)
||++-
T Consensus 77 Igis~ 81 (511)
T 3hz6_A 77 IVLSG 81 (511)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 66553
|
| >3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A | Back alignment and structure |
|---|
Probab=95.23 E-value=0.034 Score=53.59 Aligned_cols=121 Identities=17% Similarity=0.132 Sum_probs=68.8
Q ss_pred eEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCceeeeee
Q 011505 96 TYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGFT 175 (484)
Q Consensus 96 ~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~lGft 175 (484)
.+|+||+|+||+++++++ ++ ++.. .+.+++.. ..+.+++..++.+.+.. .. .+.. |+.
T Consensus 4 M~L~IDIGNT~ik~gl~~-~~---~l~~----~~r~~T~~-~~t~de~~~~l~~l~~~----~~-------~~i~--~i~ 61 (249)
T 3bex_A 4 MYLLVDVGNTHSVFSITE-DG---KTFR----RWRLSTGV-FQTEDELFSHLHPLLGD----AM-------REIK--GIG 61 (249)
T ss_dssp EEEEEEECSSEEEEEEES-SS---SSCE----EEEEECCT-TCCHHHHHHHHHHHHGG----GG-------GGEE--EEE
T ss_pred eEEEEEECCCeEEEEEEE-CC---EEEE----EEEecCCC-CCCHHHHHHHHHHHHhh----cc-------ccCC--EEE
Confidence 479999999999999996 22 2442 36666654 34566776666544332 11 1122 333
Q ss_pred eeeeeeeeecCceEEECccHHHHHHHHHHhc-CCCceE---------EEEEe------chHHHHhcccccCCCcEEEEEE
Q 011505 176 FSFPVMQTSINTGTLVGRDVVEELSRAMAKQ-GLDMSV---------SALVN------DTVGTLAGGRYTNKDVVAAVIL 239 (484)
Q Consensus 176 FSfPv~q~~~~~G~l~G~dv~~~L~~al~r~-gl~v~v---------~alvN------Dtvatlla~~y~~~~~~iglIl 239 (484)
+|=|+. .+...|++.+++. +++..+ +...| |-.+.+++.........+-+-+
T Consensus 62 IsSVvp------------~~~~~~~~~~~~~~~~~p~~v~~~~~gl~~~y~~P~~lG~DR~~~~~aa~~~~~~~~iVvD~ 129 (249)
T 3bex_A 62 VASVVP------------TQNTVIERFSQKYFHISPIWVKAKNGCVKWNVKNPSEVGADRVANVVAFVKEYGKNGIIIDM 129 (249)
T ss_dssp EEESCH------------HHHHHHHHHHHHHHSCCCEECCCCSSSSEECSSCGGGSCHHHHHHHHHHHHHTCSCEEEEEE
T ss_pred EEcCcH------------HHHHHHHHHHHHhcCCCeEEEEccCCCceeccCChhhcCHHHHHHHHHHHHHcCCCEEEEEc
Confidence 443332 2334455555442 432111 11233 5556666665444567788999
Q ss_pred ccCcceEEEcc
Q 011505 240 GTGSNAAYVER 250 (484)
Q Consensus 240 GTG~Na~yie~ 250 (484)
||.+..+++.+
T Consensus 130 GTA~T~d~v~~ 140 (249)
T 3bex_A 130 GTATTVDLVVN 140 (249)
T ss_dssp SSEEEEEEEET
T ss_pred CCceEEEEEeC
Confidence 99999999943
|
| >2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A* | Back alignment and structure |
|---|
Probab=95.23 E-value=0.041 Score=57.87 Aligned_cols=79 Identities=22% Similarity=0.127 Sum_probs=49.2
Q ss_pred eeEEEEEeCCceEEEEEEEeCCCcceeEEeeeee-----eecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCc
Q 011505 95 GTYYALDLGGTNFRVLRVHLGGKGVGLINQEFAE-----VSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQ 169 (484)
Q Consensus 95 G~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~-----~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~ 169 (484)
..+|+||+|+|++|+++++.+|+.....+..... .+.|... ..+.+++++.+.+.+++..... .+.
T Consensus 4 ~~~lgiDiGtts~k~~l~d~~g~~~~~~~~~~~~~~~~~~~~~g~~-e~d~~~~~~~i~~~~~~~~~~~--------~~i 74 (489)
T 2uyt_A 4 RNCVAVDLGASSGRVMLARYERECRSLTLREIHRFNNGLHSQNGYV-TWDVDSLESAIRLGLNKVCAAG--------IAI 74 (489)
T ss_dssp EEEEEEEECSSEEEEEEEEEEGGGTEEEEEEEEEEECCCEEETTEE-ECCHHHHHHHHHHHHHHHHHTT--------CCC
T ss_pred ceEEEEEecCCCceEEEEEecCccceEEEEEEeecCCCccccCCeE-EECHHHHHHHHHHHHHHHHhCC--------CCc
Confidence 3689999999999999999876521111111000 1111111 2346688888888888875421 235
Q ss_pred eeeeeee----eeeeee
Q 011505 170 RELGFTF----SFPVMQ 182 (484)
Q Consensus 170 ~~lGftF----SfPv~q 182 (484)
..||++. ..|+|.
T Consensus 75 ~~Igis~q~~~~v~~D~ 91 (489)
T 2uyt_A 75 DSIGIDTWGVDFVLLDQ 91 (489)
T ss_dssp CEEEEEECSSCEEEECT
T ss_pred eEEEEecCcccEEEECC
Confidence 7788888 788873
|
| >3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=95.08 E-value=0.028 Score=59.42 Aligned_cols=58 Identities=16% Similarity=0.230 Sum_probs=39.6
Q ss_pred eeEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeec-C-CCccccCcchhHHHHHHHHHHHH
Q 011505 95 GTYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSI-P-PHLMTGTSDALFDYIAAELAKFV 155 (484)
Q Consensus 95 G~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~i-p-~~~~~~~~~~lfd~Ia~~i~~fl 155 (484)
.++|+||+|+|++|+++++.+|+ ++...+..+++ | ......+++++++.+.+++++.+
T Consensus 6 ~~~lgIDiGTts~Ka~l~d~~G~---i~~~~~~~~~~~~~~g~~eqdp~~~~~~~~~~i~~~~ 65 (482)
T 3h6e_A 6 GATIVIDLGKTLSKVSLWDLDGR---MLDRQVRPSIPLEIDGIRRLDAPDTGRWLLDVLSRYA 65 (482)
T ss_dssp --CEEEEECSSEEEEEEECTTSC---EEEEEEEECCCEESSSCEECCHHHHHHHHHHHHHHTT
T ss_pred ceEEEEEcCCCCeEEEEEECCCc---EEEEEEecCCcccCCCceeECHHHHHHHHHHHHHHHH
Confidence 37899999999999999997664 55443322321 1 11123467889999999998876
|
| >3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=94.46 E-value=0.19 Score=48.85 Aligned_cols=123 Identities=14% Similarity=0.085 Sum_probs=67.1
Q ss_pred eEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCceeeeee
Q 011505 96 TYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGFT 175 (484)
Q Consensus 96 ~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~lGft 175 (484)
.+|+||+|+||+++++++- + ++.. .|++|++ ..+.+++ +..+..+++..+.+. .+. -|+.
T Consensus 3 MlL~IDIGNT~iK~gl~d~-~---~l~~----~~r~~T~--~~t~de~----~~~l~~ll~~~~~~~----~~I--~~ii 62 (266)
T 3djc_A 3 LILCIDVGNSHIYGGVFDG-D---EIKL----RFRHTSK--VSTSDEL----GIFLKSVLRENNCSP----ETI--RKIA 62 (266)
T ss_dssp CEEEEEECSSEEEEEEEET-T---EEEE----EEEEECS--CCCHHHH----HHHHHHHHHTTTCCG----GGC--CEEE
T ss_pred eEEEEEECCCeEEEEEEEC-C---EEEE----EEEecCC--CCCHHHH----HHHHHHHHHHcCCCh----hhc--eEEE
Confidence 4799999999999999963 2 3543 3778876 2355554 445556666554321 112 2444
Q ss_pred eeeeeeeeecCceEEECccHHHHHHHHHHhc-CCCceE----------EEEEe------chHHHHhcccccCC-CcEEEE
Q 011505 176 FSFPVMQTSINTGTLVGRDVVEELSRAMAKQ-GLDMSV----------SALVN------DTVGTLAGGRYTNK-DVVAAV 237 (484)
Q Consensus 176 FSfPv~q~~~~~G~l~G~dv~~~L~~al~r~-gl~v~v----------~alvN------Dtvatlla~~y~~~-~~~igl 237 (484)
+|-|+. ++...|++++++. +++..+ ....| |-.+.+++.....+ ...+=+
T Consensus 63 ISSVvp------------~~~~~l~~~~~~~~~~~~~~v~~~~~~g~~~~y~~P~~lG~DR~~~~vaA~~~~~~~~~iVV 130 (266)
T 3djc_A 63 ICSVVP------------QVDYSLRSACVKYFSIDPFLLQAGVKTGLNIKYRNPVEVGADRIANAIAATHSFPNQNIIVI 130 (266)
T ss_dssp EEESCH------------HHHHHHHHHHHHHTCCCCEECCSSSCCCCEECCSSGGGSCHHHHHHHHHHHHHSTTSEEEEE
T ss_pred EecchH------------hHHHHHHHHHHHHcCCCeEEEcCCCCCCcccCCCChhhhHHHHHHHHHHHHHhcCCCCEEEE
Confidence 444443 2445666666553 443221 11122 44555555443332 344555
Q ss_pred EEccCcceEEEcc
Q 011505 238 ILGTGSNAAYVER 250 (484)
Q Consensus 238 IlGTG~Na~yie~ 250 (484)
=+||=+...++..
T Consensus 131 D~GTA~T~d~v~~ 143 (266)
T 3djc_A 131 DFGTATTFCAISH 143 (266)
T ss_dssp EESSEEEEEEECT
T ss_pred ECCCeeEEEEEcC
Confidence 6677667677653
|
| >3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703} | Back alignment and structure |
|---|
Probab=93.20 E-value=0.16 Score=53.92 Aligned_cols=54 Identities=9% Similarity=0.070 Sum_probs=39.1
Q ss_pred eeeEEEEEeCCceEEEEEEE-eCCCcceeEEeeeeeeecCCCccccCcchhHHHHHHHHHH
Q 011505 94 KGTYYALDLGGTNFRVLRVH-LGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAK 153 (484)
Q Consensus 94 ~G~~laiDlGGTnlRv~~V~-l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~ 153 (484)
..++|+||+|+|++|+++++ .+|+ ++...+ .+.|... ..+++++++.+.+.+++
T Consensus 4 ~~~~lgIDiGtts~ka~l~d~~~G~---i~~~~~--~~~~g~~-e~d~~~~~~~i~~~l~~ 58 (515)
T 3i8b_A 4 RTLVAGVDTSTQSCKVRVTDAETGE---LVRFGQ--AKHPNGT-SVDPSYWWSAFQEAAEQ 58 (515)
T ss_dssp SCEEEEEEECSSEEEEEEEETTTCC---EEEEEE--EECCSSS-EECTHHHHHHHHHHHHH
T ss_pred CcEEEEEEeccccEEEEEEECCCCe---EEEEEE--EeCCCCc-eECHHHHHHHHHHHHHh
Confidence 34799999999999999999 6775 665433 3445333 34678888888877765
|
| >2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=92.29 E-value=0.99 Score=45.15 Aligned_cols=58 Identities=16% Similarity=0.120 Sum_probs=38.6
Q ss_pred ECccHHHHHHHHHHhcCCCceEEEEEechHHHHhccccc--C--CCcEEEEEEccCc-ceEEEcc
Q 011505 191 VGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRYT--N--KDVVAAVILGTGS-NAAYVER 250 (484)
Q Consensus 191 ~G~dv~~~L~~al~r~gl~v~v~alvNDtvatlla~~y~--~--~~~~iglIlGTG~-Na~yie~ 250 (484)
.-++.++.+.+++++.|+++ ..++|..+|+..+..+. + ....+=+=+|-|| ..+.+..
T Consensus 148 ~~~~~v~~~~~~~~~aGl~~--~~i~~ep~Aaa~~~~~~~~~~~~~~~~vvDiGggttdi~i~~~ 210 (377)
T 2ych_A 148 ARQEAVAGVLEALRGAGLVP--VVLDVKPFAGLYPLEARLAEEPDRVFLVLDIGAESTSLVLLRG 210 (377)
T ss_dssp EEHHHHHHHHHHHHHTTCEE--EEEEEHHHHTTGGGHHHHHTSTTCEEEEEEECSSCEEEEEEET
T ss_pred ecHHHHHHHHHHHHHCCCce--EEEecchHHHHHHHHhhcccccCCeEEEEEECCCcEEEEEEEC
Confidence 44456788888998888765 58999999987764321 1 2344555678877 5555543
|
| >4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A* | Back alignment and structure |
|---|
Probab=88.57 E-value=0.9 Score=48.30 Aligned_cols=47 Identities=19% Similarity=0.282 Sum_probs=32.3
Q ss_pred EEEEeceeeccchhHHHHHHHHHHHHhcccCCccEEEEEcCChhHHHHHHHHHHhc
Q 011505 423 VIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVIEHSNDGSGIGAALLAASHS 478 (484)
Q Consensus 423 ~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~~~~~v~i~~~~Dgs~iGAAl~Aa~~~ 478 (484)
.|.++||.. +.+.+.+.+...+. ..|......+++.+|||++|+++.
T Consensus 437 ~i~~~GGga-~s~~~~Qi~ADv~g--------~pV~~~~~~e~~alGaA~lA~~a~ 483 (538)
T 4bc3_A 437 KILATGGAS-HNREILQVLADVFD--------APVYVIDTANSACVGSAYRAFHGL 483 (538)
T ss_dssp CEEEEEGGG-GCHHHHHHHHHHHT--------SCEEECCCTTHHHHHHHHHHHHHH
T ss_pred eEEEEcchh-cCHHHHHHHHHHhC--------CceEecCCCCchHHHHHHHHHHHh
Confidence 355555554 78888776665442 245554567899999999998765
|
| >3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid} | Back alignment and structure |
|---|
Probab=87.29 E-value=6.3 Score=37.12 Aligned_cols=110 Identities=13% Similarity=0.153 Sum_probs=54.3
Q ss_pred eeeEEEEEeCCceEEEEEEEeCCCcceeEEeeee-eeecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCceee
Q 011505 94 KGTYYALDLGGTNFRVLRVHLGGKGVGLINQEFA-EVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQREL 172 (484)
Q Consensus 94 ~G~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~-~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~l 172 (484)
...+++||+|.+++|+.+++-++ .++..... ..++.+.... + ++.....+..+++...... . ...-
T Consensus 27 ~~~~~gIDiGS~s~k~vi~~~~~---~~l~~~~~~~~~l~~g~i~-d----~~~~~~~l~~~~~~~~~~~----~-~~~~ 93 (272)
T 3h1q_A 27 PPYKVGVDLGTADIVLVVTDQEG---IPVAGALKWASVVKDGLVV-D----YIGAIQIVRELKAKVERLL----G-SELF 93 (272)
T ss_dssp SCCEEEEECCSSEEEEEEECTTC---CEEEEEEEECCCCBTTBCT-T----HHHHHHHHHHHHHHHHHHS----S-SCCC
T ss_pred CCEEEEEEcccceEEEEEECCCC---cEEEEEeecccccCCCEEE-c----HHHHHHHHHHHHHHHHHhc----C-CccC
Confidence 34799999999999998864333 23322111 1122222210 1 3344444444443211100 0 0011
Q ss_pred eeeeeeeeeeeecCceEEECccHHHHHHHHHHhcCCCceEEEEEechHHHHhccc
Q 011505 173 GFTFSFPVMQTSINTGTLVGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGR 227 (484)
Q Consensus 173 GftFSfPv~q~~~~~G~l~G~dv~~~L~~al~r~gl~v~v~alvNDtvatlla~~ 227 (484)
-.+.+.|..... .++ +.+++++++.|+++ ..++++..|++.+..
T Consensus 94 ~~v~tvp~~~~~------~~~---~~~~~~~~~~g~~~--~~i~~e~~A~a~~~~ 137 (272)
T 3h1q_A 94 QAATAIPPGTVG------RNA---EACGHVVAGAGLEL--VTLVDEPVAAARALG 137 (272)
T ss_dssp EEEEECCSCC---------CT---THHHHHHHHTTCEE--EEEECHHHHHHHHHT
T ss_pred eEEEEcCCCCCH------HHH---HHHHHHHHHcCCee--eecccHHHHHHHHHc
Confidence 223444543221 122 34666777667765 578999999887643
|
| >2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=85.58 E-value=1.2 Score=43.26 Aligned_cols=44 Identities=20% Similarity=0.194 Sum_probs=29.4
Q ss_pred EEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeecCCCccccCcchhHHHHHH
Q 011505 97 YYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAA 149 (484)
Q Consensus 97 ~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~ 149 (484)
+|+||+|+||+++++++ ++ ++.. .|.+++.. ..+.+++..++.+
T Consensus 2 lL~IDIGNT~ik~gl~~-~~---~l~~----~~r~~T~~-~~t~de~~~~l~~ 45 (268)
T 2h3g_X 2 IFVLDVGNTNAVLGVFE-EG---ELRQ----HWRMETDR-HKTEDEYGMLVKQ 45 (268)
T ss_dssp EEEEEECSSEEEEEEEE-TT---EEEE----EEEEECCT-TCCHHHHHHHHHH
T ss_pred EEEEEECcCcEEEEEEE-CC---EEEE----EEEecCCC-cCCHHHHHHHHHH
Confidence 68999999999999997 22 2442 36666654 2355666555544
|
| >4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var} | Back alignment and structure |
|---|
Probab=85.47 E-value=4.2 Score=41.09 Aligned_cols=83 Identities=19% Similarity=0.179 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCcceEEEEeceeeccchhHHHHHHHHHHHHhcccCCccEEE
Q 011505 380 RKTIVELCNIVATRGARLAAAGILGVLKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVI 459 (484)
Q Consensus 380 ~~~~~~i~~~V~~RaA~l~Aa~iaaii~~~~~~~~~~~~~~~~~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~~~~~v~i 459 (484)
+..+.++++.+++|...++-..|.. .+.. ...-..|.+.||. ...|.+++.+++.+. . .+.+
T Consensus 313 r~~~~~~~~~~~~~i~~~i~~~l~~----~~~~-----~~~i~~V~LvGG~-s~~p~v~~~l~~~f~----~----~~~v 374 (409)
T 4gni_A 313 RLRYETIARTVFEGFNRLVESAVKK----AGLD-----PLDVDEVIMSGGT-SNTPRIAANFRYIFP----E----STRI 374 (409)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHHHH----TTCC-----GGGCCEEEEESGG-GGCHHHHHHHHHHSC----T----TSEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH----cCCC-----HHHCCEEEEECCc-cccHHHHHHHHHHcC----C----cccc
Confidence 4455567777777776666655542 2221 0011234444554 357888887777653 2 1111
Q ss_pred ---------EEcCChhHHHHHHHHHHhccc
Q 011505 460 ---------EHSNDGSGIGAALLAASHSKY 480 (484)
Q Consensus 460 ---------~~~~Dgs~iGAAl~Aa~~~~~ 480 (484)
.-.+.+-..|||+.++...++
T Consensus 375 ~~P~~~~~~~~p~~ava~GAa~~~~~~~~~ 404 (409)
T 4gni_A 375 LAPSTDPSALNPSELQARGAALQASLIQEH 404 (409)
T ss_dssp ESTTTCTTCCCTTTHHHHHHHHHHHHHHC-
T ss_pred ccccccCCCcCHHHHHHHHHHHHhhhhhhh
Confidence 125678899999999887754
|
| >3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ... | Back alignment and structure |
|---|
Probab=83.67 E-value=5.9 Score=39.79 Aligned_cols=82 Identities=20% Similarity=0.197 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCcceEEEEeceeeccchhHHHHHHHHHHHHhcccCCccEEE
Q 011505 380 RKTIVELCNIVATRGARLAAAGILGVLKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVI 459 (484)
Q Consensus 380 ~~~~~~i~~~V~~RaA~l~Aa~iaaii~~~~~~~~~~~~~~~~~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~~~~~v~i 459 (484)
+..+.++++.+++|...++-..|.. .+... ..-..|.+.||. ...|.+++.+++.+. +. .+..
T Consensus 320 r~~~~~~~~~~~~~i~~~i~~~l~~----~~~~~-----~~i~~VvLvGG~-s~~p~l~~~l~~~~~---~~----~v~~ 382 (404)
T 3i33_A 320 RARFEELNADLFRGTLEPVEKALRD----AKLDK-----GQIQEIVLVGGS-TRIPKIQKLLQDFFN---GK----ELNK 382 (404)
T ss_dssp HHHHHHHTHHHHHHTHHHHHHHHHH----HTCCG-----GGCCEEEEESGG-GGCHHHHHHHHHHTT---TC----CCBC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH----cCCCH-----hhCCEEEEECCc-cccHHHHHHHHHHcC---CC----CCCC
Confidence 3445566667777766666555433 22210 011234444444 357888888887652 11 1111
Q ss_pred E-EcCChhHHHHHHHHHHhc
Q 011505 460 E-HSNDGSGIGAALLAASHS 478 (484)
Q Consensus 460 ~-~~~Dgs~iGAAl~Aa~~~ 478 (484)
. -...+-.+|||+.|+..+
T Consensus 383 ~~~p~~ava~Gaa~~a~~l~ 402 (404)
T 3i33_A 383 SINPDEAVAYGAAVQAAILI 402 (404)
T ss_dssp SSCTTTHHHHHHHHHHHHHC
T ss_pred CcCHHHHHHHHHHHHHHHhc
Confidence 1 245678899999998654
|
| >3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y* | Back alignment and structure |
|---|
Probab=80.02 E-value=6.1 Score=41.69 Aligned_cols=78 Identities=15% Similarity=0.134 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCcceEEEEeceeeccchhHHHHHHHHHHHHhcccCCccEEEEEcCC
Q 011505 385 ELCNIVATRGARLAAAGILGVLKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVIEHSND 464 (484)
Q Consensus 385 ~i~~~V~~RaA~l~Aa~iaaii~~~~~~~~~~~~~~~~~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~~~~~v~i~~~~D 464 (484)
.+++++++=-|.-..-.+-.+-+..+.. ...|.++||.. +.+.+.+.+...+ + ..|.+-...+
T Consensus 375 ~i~RAvlEgia~~~r~~le~l~~~~g~~--------~~~i~v~GGga-ks~~~~Qi~ADvl----g----~pV~~~~~~E 437 (526)
T 3ezw_A 375 HIIRATLESIAYQTRDVLEAMQADSGIR--------LHALRVDGGAV-ANNFLMQFQSDIL----G----TRVERPEVRE 437 (526)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCC--------CSEEEEESGGG-GCHHHHHHHHHHH----T----SEEEEESCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCC--------CCEEEEECchh-hCHHHHHHHHHHH----C----CEEEeCCCCc
Confidence 4555666654544444444444444431 24577777764 7787777665543 2 2565555788
Q ss_pred hhHHHHHHHHHHhcc
Q 011505 465 GSGIGAALLAASHSK 479 (484)
Q Consensus 465 gs~iGAAl~Aa~~~~ 479 (484)
++.+|||++|+++.-
T Consensus 438 ~~alGAA~lA~~a~G 452 (526)
T 3ezw_A 438 VTALGAAYLAGLAVG 452 (526)
T ss_dssp HHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHhC
Confidence 999999999998763
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 484 | ||||
| d1bdga2 | 237 | c.55.1.3 (A:223-460) Hexokinase {Blood fluke (Schi | 8e-93 | |
| d1czan4 | 243 | c.55.1.3 (N:671-913) Mammalian type I hexokinase { | 2e-91 | |
| d1ig8a2 | 262 | c.55.1.3 (A:225-486) Hexokinase {Baker's yeast (Sa | 9e-89 | |
| d1v4sa2 | 243 | c.55.1.3 (A:219-461) Glucokinase {Human (Homo sapi | 1e-88 | |
| d1czan2 | 243 | c.55.1.3 (N:223-465) Mammalian type I hexokinase { | 2e-86 | |
| d1bdga1 | 208 | c.55.1.3 (A:13-222) Hexokinase {Blood fluke (Schis | 2e-69 | |
| d1v4sa1 | 205 | c.55.1.3 (A:14-218) Glucokinase {Human (Homo sapie | 3e-68 | |
| d1ig8a1 | 207 | c.55.1.3 (A:18-224) Hexokinase {Baker's yeast (Sac | 6e-67 | |
| d1czan3 | 205 | c.55.1.3 (N:466-670) Mammalian type I hexokinase { | 2e-66 | |
| d1czan1 | 207 | c.55.1.3 (N:16-222) Mammalian type I hexokinase {H | 2e-66 | |
| d2ch5a1 | 227 | c.55.1.5 (A:118-344) N-acetylglucosamine kinase, N | 1e-04 |
| >d1bdga2 c.55.1.3 (A:223-460) Hexokinase {Blood fluke (Schistosoma mansoni) [TaxId: 6183]} Length = 237 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Hexokinase domain: Hexokinase species: Blood fluke (Schistosoma mansoni) [TaxId: 6183]
Score = 279 bits (715), Expect = 8e-93
Identities = 75/243 (30%), Positives = 132/243 (54%), Gaps = 15/243 (6%)
Query: 237 VILGTGSNAAYVERAQAIPKWHGVPSKSGEMVINMEWGDFRSSHLS---LSEYDNALDAE 293
+I+GTG+N AY+E + + G K E+VIN EWG F +++D ++D +
Sbjct: 6 LIVGTGTNVAYIEDSSKVELMDG--VKEPEVVINTEWGAFGEKGELDCWRTQFDKSMDID 63
Query: 294 SLNPGEQIFEKMISGMYLGEIVRRVLLRMAQEAAFFGDTVPPKLEVPFALRTPDMSAMHH 353
SL+PG+Q++EKM+SGMYLGE+VR +++ + ++ F +P +L+V +L T ++ +
Sbjct: 64 SLHPGKQLYEKMVSGMYLGELVRHIIVYLVEQKILFRGDLPERLKVRNSLLTRYLTDVER 123
Query: 354 DTSSDLKVVETKLKDILEISSTSLSMRKTIVELCNIVATRGARLAAAGILGVLKKMGRDA 413
D + L L D L + + + C +V R A LA AGI +L+++ R
Sbjct: 124 DPAHLLYNTHYMLTDDLHVPVVEPIDNRIVRYACEMVVKRAAYLAGAGIACILRRINRS- 182
Query: 414 AKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVIEHSNDGSGIGAALL 473
+ + +DG LY+ + ++ + + + +++L + + S DGSG GAA +
Sbjct: 183 -------EVTVGVDGSLYKFHPKFCERMTDMVDKLKPKN--TRFCLRLSEDGSGKGAAAI 233
Query: 474 AAS 476
AAS
Sbjct: 234 AAS 236
|
| >d1czan4 c.55.1.3 (N:671-913) Mammalian type I hexokinase {Human (Homo sapiens) [TaxId: 9606]} Length = 243 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Hexokinase domain: Mammalian type I hexokinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 276 bits (707), Expect = 2e-91
Identities = 81/246 (32%), Positives = 129/246 (52%), Gaps = 14/246 (5%)
Query: 237 VILGTGSNAAYVERAQAIPKWHGVPSKSGEMVINMEWGDFRSSHLS---LSEYDNALDAE 293
+I+GTGSNA Y+E + + G G+M INMEWG F + + YD +D
Sbjct: 6 LIVGTGSNACYMEEMKNVEMVEG---DQGQMCINMEWGAFGDNGCLDDIRTHYDRLVDEY 62
Query: 294 SLNPGEQIFEKMISGMYLGEIVRRVLLRMAQEAAFFGDTVPPKLEVPFALRTPDMSAMHH 353
SLN G+Q +EKMISGMYLGEIVR +L+ ++ F + L+ T +S +
Sbjct: 63 SLNAGKQRYEKMISGMYLGEIVRNILIDFTKKGFLFRGQISETLKTRGIFETKFLSQIES 122
Query: 354 DTSSDLKVVETKLKDILEISSTSLSMRKTIVELCNIVATRGARLAAAGILGVLKKMGRDA 413
D + L+V + L ++ST + +C +V+ R A+L AG+ V+ K+ +
Sbjct: 123 DRLALLQV--RAILQQLGLNST-CDDSILVKTVCGVVSRRAAQLCGAGMAAVVDKIREN- 178
Query: 414 AKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVIEHSNDGSGIGAALL 473
+ D+ + +DG LY+ + +S+ + T++EL + N+ S DGSG GAAL+
Sbjct: 179 -RGLDRLNVTVGVDGTLYKLHPHFSRIMHQTVKELSPK---CNVSFLLSEDGSGKGAALI 234
Query: 474 AASHSK 479
A +
Sbjct: 235 TAVGVR 240
|
| >d1ig8a2 c.55.1.3 (A:225-486) Hexokinase {Baker's yeast (Saccharomyces cerevisiae), pII [TaxId: 4932]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Hexokinase domain: Hexokinase species: Baker's yeast (Saccharomyces cerevisiae), pII [TaxId: 4932]
Score = 270 bits (691), Expect = 9e-89
Identities = 85/261 (32%), Positives = 126/261 (48%), Gaps = 19/261 (7%)
Query: 232 DVVAAVILGTGSNAAYVERAQAIPKWHGVPS----KSGEMVINMEWGDFRSSHLSL--SE 285
+ VI GTG N AY + I K G S S M IN E+G F + H+ L ++
Sbjct: 1 ETKMGVIFGTGVNGAYYDVCSDIEKLQGKLSDDIPPSAPMAINCEYGSFDNEHVVLPRTK 60
Query: 286 YDNALDAESLNPGEQIFEKMISGMYLGEIVRRVLLRMAQEAAFFGDTVPPKLEVPFALRT 345
YD +D ES PG+Q FEKM SG YLGEI+R L+ M ++ F + K + PF + T
Sbjct: 61 YDITIDEESPRPGQQTFEKMSSGYYLGEILRLALMDMYKQGFIFKNQDLSKFDKPFVMDT 120
Query: 346 PDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELCNIVATRGARLAAAGILGV 405
+ + D +L+ + ++ I++T + RK I L ++ R ARL+ GI +
Sbjct: 121 SYPARIEEDPFENLEDTDDLFQNEFGINTT-VQERKLIRRLSELIGARAARLSVCGIAAI 179
Query: 406 LKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELF----KNIVIEH 461
+K G IA DG +Y Y + + N L+++ G I I
Sbjct: 180 CQKRGYK--------TGHIAADGSVYNRYPGFKEKAANALKDIYGWTQTSLDDYPIKIVP 231
Query: 462 SNDGSGIGAALLAASHSKYLQ 482
+ DGSG GAA++AA K +
Sbjct: 232 AEDGSGAGAAVIAALAQKRIA 252
|
| >d1v4sa2 c.55.1.3 (A:219-461) Glucokinase {Human (Homo sapiens) [TaxId: 9606]} Length = 243 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Hexokinase domain: Glucokinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 269 bits (688), Expect = 1e-88
Identities = 77/247 (31%), Positives = 117/247 (47%), Gaps = 14/247 (5%)
Query: 237 VILGTGSNAAYVERAQAIPKWHGVPSKSGEMVINMEWGDFRSSH---LSLSEYDNALDAE 293
+I+GTG NA Y+E Q + G G M +N EWG F S L EYD +D
Sbjct: 6 MIVGTGCNACYMEEMQNVELVEG---DEGRMCVNTEWGAFGDSGELDEFLLEYDRLVDES 62
Query: 294 SLNPGEQIFEKMISGMYLGEIVRRVLLRMAQEAAFFGDTVPPKLEVPFALRTPDMSAMHH 353
S NPG+Q++EK+I G Y+GE+VR VLLR+ E F +L A T +S +
Sbjct: 63 SANPGQQLYEKLIGGKYMGELVRLVLLRLVDENLLFHGEASEQLRTRGAFETRFVSQVES 122
Query: 354 DTSSDLKVVETKLKDILEISSTSLSMRKTIVELCNIVATRGARLAAAGILGVLKKMGRDA 413
DT ++ L S + + C V+TR A + +AG+ GV+ +M
Sbjct: 123 DTGDRKQIYNILSTLGLR---PSTTDCDIVRRACESVSTRAAHMCSAGLAGVINRMRES- 178
Query: 414 AKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVIEHSNDGSGIGAALL 473
+ D + + +DG +Y+ + + + ++ L I S +GSG GAAL+
Sbjct: 179 -RSEDVMRITVGVDGSVYKLHPSFKERFHASVRRLTPS---CEITFIESEEGSGRGAALV 234
Query: 474 AASHSKY 480
+A K
Sbjct: 235 SAVACKK 241
|
| >d1czan2 c.55.1.3 (N:223-465) Mammalian type I hexokinase {Human (Homo sapiens) [TaxId: 9606]} Length = 243 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Hexokinase domain: Mammalian type I hexokinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 263 bits (673), Expect = 2e-86
Identities = 85/250 (34%), Positives = 133/250 (53%), Gaps = 14/250 (5%)
Query: 236 AVILGTGSNAAYVERAQAIPKWHGVPSKSGEMVINMEWGDF---RSSHLSLSEYDNALDA 292
+I+GTG+NA Y+E + I G G M IN EWG F S +E+D A+DA
Sbjct: 5 GLIIGTGTNACYMEELRHIDLVEG---DEGRMCINTEWGAFGDDGSLEDIRTEFDRAIDA 61
Query: 293 ESLNPGEQIFEKMISGMYLGEIVRRVLLRMAQEAAFFGDTVPPKLEVPFALRTPDMSAMH 352
SLNPG+Q+FEKM+SGMYLGE+VR +L++MA+E F + P+L T D+SA+
Sbjct: 62 YSLNPGKQLFEKMVSGMYLGELVRLILVKMAKEGLLFEGRITPELLTRGKFNTSDVSAIE 121
Query: 353 HDTSSDLKVVETKLKDILEISSTSLSMRKTIVELCNIVATRGARLAAAGILGVLKKMGRD 412
+ L + L + S ++ +C IV+ R A L AA + +L ++ +
Sbjct: 122 KN-KEGLHNAKEILTRLG--VEPSDDDCVSVQHVCTIVSFRSANLVAATLGAILNRLRDN 178
Query: 413 AAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVIEHSNDGSGIGAAL 472
K + +T + +DG LY+ + +YS+ TL L+ + ++ S GSG GAA+
Sbjct: 179 --KGTPRLRTTVGVDGSLYKTHPQYSRRFHKTLRRLVPD---SDVRFLLSESGSGKGAAM 233
Query: 473 LAASHSKYLQ 482
+ A + +
Sbjct: 234 VTAVAYRLAE 243
|
| >d1bdga1 c.55.1.3 (A:13-222) Hexokinase {Blood fluke (Schistosoma mansoni) [TaxId: 6183]} Length = 208 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Hexokinase domain: Hexokinase species: Blood fluke (Schistosoma mansoni) [TaxId: 6183]
Score = 218 bits (557), Expect = 2e-69
Identities = 73/203 (35%), Positives = 96/203 (47%), Gaps = 20/203 (9%)
Query: 42 KEFEEKCRTPAAKLKQVADAMTVEMHAGLASEG--GSKLKMIISYVDNLPTGDEKGTYYA 99
E + +++ D M M GL S +KM SYV P G E G + A
Sbjct: 11 VEILKPFDLSVVDYEEICDRMGESMRLGLQKSTNEKSSIKMFPSYVTKTPNGTETGNFLA 70
Query: 100 LDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQES 159
LDLGGTN+RVL V L GKG QE IP M+G+ LF YIA LA F+
Sbjct: 71 LDLGGTNYRVLSVTLEGKGKSPRIQER-TYCIPAEKMSGSGTELFKYIAETLADFLENNG 129
Query: 160 EEFKLSPGRQRELGFTFSFPVMQTSINTGTL------------VGRDVVEELSRAMAKQG 207
+ ++ +LGFTFSFP +Q + TL G +V E L + K+
Sbjct: 130 MK-----DKKFDLGFTFSFPCVQKGLTHATLVRWTKGFSADGVEGHNVAELLQTELDKRE 184
Query: 208 LDMSVSALVNDTVGTLAGGRYTN 230
L++ A+VNDTVGTLA +
Sbjct: 185 LNVKCVAVVNDTVGTLASCALED 207
|
| >d1v4sa1 c.55.1.3 (A:14-218) Glucokinase {Human (Homo sapiens) [TaxId: 9606]} Length = 205 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Hexokinase domain: Glucokinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 215 bits (548), Expect = 3e-68
Identities = 71/208 (34%), Positives = 108/208 (51%), Gaps = 22/208 (10%)
Query: 40 IMKEFEEKCRTPAAKLKQVADAMTVEMHAGLASEGG--SKLKMIISYVDNLPTGDEKGTY 97
++++ + + LK+V M EM GL E + +KM+ +YV + P G E G +
Sbjct: 2 LVEQILAEFQLQEEDLKKVMRRMQKEMDRGLRLETHEEASVKMLPTYVRSTPEGSEVGDF 61
Query: 98 YALDLGGTNFRVLRVHLGGKGVG--LINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFV 155
+LDLGGTNFRV+ V +G G + + SIP MTGT++ LFDYI+ ++ F+
Sbjct: 62 LSLDLGGTNFRVMLVKVGEGEEGQWSVKTKHQMYSIPEDAMTGTAEMLFDYISECISDFL 121
Query: 156 SQESEEFKLSPGRQRELGFTFSFPVMQTSINTGTL------------VGRDVVEELSRAM 203
+ + ++ LGFTFSFPV I+ G L G +VV L A+
Sbjct: 122 DKHQMK-----HKKLPLGFTFSFPVRHEDIDKGILLNWTKGFKASGAEGNNVVGLLRDAI 176
Query: 204 AKQG-LDMSVSALVNDTVGTLAGGRYTN 230
++G +M V A+VNDTV T+ Y +
Sbjct: 177 KRRGDFEMDVVAMVNDTVATMISCYYED 204
|
| >d1ig8a1 c.55.1.3 (A:18-224) Hexokinase {Baker's yeast (Saccharomyces cerevisiae), pII [TaxId: 4932]} Length = 207 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Hexokinase domain: Hexokinase species: Baker's yeast (Saccharomyces cerevisiae), pII [TaxId: 4932]
Score = 212 bits (540), Expect = 6e-67
Identities = 71/202 (35%), Positives = 98/202 (48%), Gaps = 19/202 (9%)
Query: 42 KEFEEKCRTPAAKLKQVADAMTVEMHAGLASEGGSKLKMIISYVDNLPTGDEKGTYYALD 101
+ FE+ P L+ V E+ GL+ +GG+ MI +V + PTG E G + A+D
Sbjct: 11 ENFEKIFTVPTETLQAVTKHFISELEKGLSKKGGNI-PMIPGWVMDFPTGKESGDFLAID 69
Query: 102 LGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLM-TGTSDALFDYIAAELAKFVSQESE 160
LGGTN RV+ V LGG Q + +P + T D L+++IA L F+ E
Sbjct: 70 LGGTNLRVVLVKLGGDRTFDTTQS--KYRLPDAMRTTQNPDELWEFIADSLKAFI---DE 124
Query: 161 EFKLSPGRQRELGFTFSFPVMQTSINTGTL------------VGRDVVEELSRAMAKQGL 208
+F LGFTFSFP Q IN G L DVV L + + K+ +
Sbjct: 125 QFPQGISEPIPLGFTFSFPASQNKINEGILQRWTKGFDIPNIENHDVVPMLQKQITKRNI 184
Query: 209 DMSVSALVNDTVGTLAGGRYTN 230
+ V AL+NDT GTL YT+
Sbjct: 185 PIEVVALINDTTGTLVASYYTD 206
|
| >d1czan3 c.55.1.3 (N:466-670) Mammalian type I hexokinase {Human (Homo sapiens) [TaxId: 9606]} Length = 205 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Hexokinase domain: Mammalian type I hexokinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 210 bits (537), Expect = 2e-66
Identities = 71/205 (34%), Positives = 101/205 (49%), Gaps = 20/205 (9%)
Query: 41 MKEFEEKCRTPAAKLKQVADAMTVEMHAGLASEG--GSKLKMIISYVDNLPTGDEKGTYY 98
++E L +V M EM GL + + +KM+ S+V P G E G +
Sbjct: 5 IEETLAHFHLTKDMLLEVKKRMRAEMELGLRKQTHNNAVVKMLPSFVRRTPDGTENGDFL 64
Query: 99 ALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQE 158
ALDLGGTNFRVL V + + +IP +M GT + LFD+I + ++ F+
Sbjct: 65 ALDLGGTNFRVLLVKIRSGKKRTVEMHNKIYAIPIEIMQGTGEELFDHIVSCISDFL--- 121
Query: 159 SEEFKLSPGRQRELGFTFSFPVMQTSINTGTL------------VGRDVVEELSRAMAKQ 206
++ G + LGFTFSFP QTS++ G L VG DVV L A+ ++
Sbjct: 122 --DYMGIKGPRMPLGFTFSFPCQQTSLDAGILITWTKGFKATDCVGHDVVTLLRDAIKRR 179
Query: 207 -GLDMSVSALVNDTVGTLAGGRYTN 230
D+ V A+VNDTVGT+ Y
Sbjct: 180 EEFDLDVVAVVNDTVGTMMTCAYEE 204
|
| >d1czan1 c.55.1.3 (N:16-222) Mammalian type I hexokinase {Human (Homo sapiens) [TaxId: 9606]} Length = 207 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Hexokinase domain: Mammalian type I hexokinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 210 bits (537), Expect = 2e-66
Identities = 63/205 (30%), Positives = 107/205 (52%), Gaps = 20/205 (9%)
Query: 42 KEFEEKCRTPAAKLKQVADAMTVEMHAGLASEG--GSKLKMIISYVDNLPTGDEKGTYYA 99
++ R L + EM GL+ + + +KM+ ++V ++P G EKG + A
Sbjct: 8 DKYLYAMRLSDETLIDIMTRFRKEMKNGLSRDFNPTATVKMLPTFVRSIPDGSEKGDFIA 67
Query: 100 LDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQES 159
LDLGG++FR+LRV + + ++ E P +++ G+ LFD++A L F+ +
Sbjct: 68 LDLGGSSFRILRVQVNHEKNQNVHMESEVYDTPENIVHGSGSQLFDHVAECLGDFMEKRK 127
Query: 160 EEFKLSPGRQRELGFTFSFPVMQTSINTGTL------------VGRDVVEELSRAMAKQG 207
+ K + +GFTFSFP Q+ I+ L G DVV+ L++A+ K+G
Sbjct: 128 IKDK-----KLPVGFTFSFPCQQSKIDEAILITWTKRFKASGVEGADVVKLLNKAIKKRG 182
Query: 208 -LDMSVSALVNDTVGTLAGGRYTNK 231
D ++ A+VNDTVGT+ Y ++
Sbjct: 183 DYDANIVAVVNDTVGTMMTCGYDDQ 207
|
| >d2ch5a1 c.55.1.5 (A:118-344) N-acetylglucosamine kinase, NAGK {Human (Homo sapiens) [TaxId: 9606]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: BadF/BadG/BcrA/BcrD-like domain: N-acetylglucosamine kinase, NAGK species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.4 bits (96), Expect = 1e-04
Identities = 25/252 (9%), Positives = 61/252 (24%), Gaps = 53/252 (21%)
Query: 235 AAVILGTGSNAAYVERAQAIPKWHGVPSKSGEMVINMEWGDFRSSHLSLSEYDNALDAES 294
+I GTGSN + + G WG
Sbjct: 4 VVLISGTGSNCRLI-------------NPDGSESGCGGWGH------------------- 31
Query: 295 LNPGEQIFEKMISGMYLGEIVRRVLLRMAQEAAFFGDTVPPKLEVPFALRTPDMSAMHHD 354
+ S ++ +++ D + ++
Sbjct: 32 ------MMGDEGSAYWIAHQAVKIVFDSI-------DNLEAAPHDIGYVKQAMFHYFQVP 78
Query: 355 TSSDLKVVETKLKDILEISSTSLSMR---KTIVELCNIVATRGARLAAAGILGVLKKMGR 411
+ + D + + + L + + + I+ VL ++
Sbjct: 79 DRLGILTHLYRDFDKCRFAGFCRKIAEGAQQGDPLSRYIFRKAGEMLGRHIVAVLPEIDP 138
Query: 412 DAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLG---EELFKNIVIEHSNDGSGI 468
+ + G +++ + + L + + F + + S +
Sbjct: 139 VLFQGKIGLPILCV--GSVWKSWELLKEGFLLALTQGREIQAQNFFSSFTLMKLRHSSAL 196
Query: 469 GAALLAASHSKY 480
G A L A H +
Sbjct: 197 GGASLGARHIGH 208
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 484 | |||
| d1ig8a2 | 262 | Hexokinase {Baker's yeast (Saccharomyces cerevisia | 100.0 | |
| d1bdga2 | 237 | Hexokinase {Blood fluke (Schistosoma mansoni) [Tax | 100.0 | |
| d1czan4 | 243 | Mammalian type I hexokinase {Human (Homo sapiens) | 100.0 | |
| d1v4sa2 | 243 | Glucokinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1czan2 | 243 | Mammalian type I hexokinase {Human (Homo sapiens) | 100.0 | |
| d1czan3 | 205 | Mammalian type I hexokinase {Human (Homo sapiens) | 100.0 | |
| d1bdga1 | 208 | Hexokinase {Blood fluke (Schistosoma mansoni) [Tax | 100.0 | |
| d1ig8a1 | 207 | Hexokinase {Baker's yeast (Saccharomyces cerevisia | 100.0 | |
| d1v4sa1 | 205 | Glucokinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1czan1 | 207 | Mammalian type I hexokinase {Human (Homo sapiens) | 100.0 | |
| d1z05a2 | 197 | Transcriptional regulator VC2007 {Vibrio cholerae | 99.7 | |
| d1sz2a1 | 319 | Glucokinase Glk {Escherichia coli [TaxId: 562]} | 99.69 | |
| d1z6ra3 | 196 | Mlc protein {Escherichia coli [TaxId: 562]} | 99.58 | |
| d2ap1a1 | 186 | Putative regulator protein YcfX {Salmonella typhim | 99.52 | |
| d2gupa2 | 175 | Hypothetical protein SP2142 {Streptococcus pneumon | 99.49 | |
| d2aa4a2 | 170 | N-acetylmannosamine kinase NanK {Escherichia coli | 99.48 | |
| d2ap1a2 | 117 | Putative regulator protein YcfX {Salmonella typhim | 99.43 | |
| d2hoea2 | 169 | N-acetylglucosamine kinase {Thermotoga maritima [T | 99.42 | |
| d2hoea3 | 128 | N-acetylglucosamine kinase {Thermotoga maritima [T | 99.37 | |
| d1z6ra2 | 129 | Mlc protein {Escherichia coli [TaxId: 562]} | 99.3 | |
| d2gupa1 | 114 | Hypothetical protein SP2142 {Streptococcus pneumon | 99.28 | |
| d2aa4a1 | 119 | N-acetylmannosamine kinase NanK {Escherichia coli | 99.27 | |
| d1woqa1 | 129 | Inorganic polyphosphate/ATP-glucomannokinase PPGMK | 99.27 | |
| d1z05a3 | 128 | Transcriptional regulator VC2007 {Vibrio cholerae | 99.26 | |
| d1xc3a2 | 176 | Putative fructokinase YhdR {Bacillus subtilis [Tax | 99.12 | |
| d1xc3a1 | 118 | Putative fructokinase YhdR {Bacillus subtilis [Tax | 99.09 | |
| d2ewsa1 | 267 | Type II pantothenate kinase, CoaW {Staphylococcus | 99.0 | |
| d1woqa2 | 124 | Inorganic polyphosphate/ATP-glucomannokinase PPGMK | 98.91 | |
| d1huxa_ | 259 | Hydroxyglutaryl-CoA dehydratase component A {Acida | 98.87 | |
| d2ch5a1 | 227 | N-acetylglucosamine kinase, NAGK {Human (Homo sapi | 98.75 | |
| d1q18a1 | 110 | Glucokinase Glk {Escherichia coli [TaxId: 562]} | 98.69 | |
| d1zc6a1 | 114 | Probable N-acetylglucosamine kinase CV2896 {Chromo | 98.58 | |
| d2ch5a2 | 117 | N-acetylglucosamine kinase, NAGK {Human (Homo sapi | 97.98 | |
| d2p3ra1 | 252 | Glycerol kinase {Escherichia coli [TaxId: 562]} | 96.89 | |
| d1zc6a2 | 171 | Probable N-acetylglucosamine kinase CV2896 {Chromo | 96.43 | |
| d1r59o1 | 252 | Glycerol kinase {Enterococcus casseliflavus [TaxId | 94.75 | |
| d1zbsa1 | 176 | Hypothetical protein PG1100 {Porphyromonas gingiva | 93.45 | |
| d1zbsa2 | 107 | Hypothetical protein PG1100 {Porphyromonas gingiva | 92.89 | |
| d1bupa1 | 185 | Heat shock protein 70kDa, ATPase fragment {Cow (Bo | 92.08 | |
| d1r59o2 | 235 | Glycerol kinase {Enterococcus casseliflavus [TaxId | 87.82 | |
| d2p3ra2 | 247 | Glycerol kinase {Escherichia coli [TaxId: 562]} | 87.63 | |
| d1e4ft1 | 193 | Cell division protein FtsA {Thermotoga maritima [T | 85.7 | |
| d1u6za2 | 124 | Exopolyphosphatase Ppx {Escherichia coli [TaxId: 5 | 82.25 |
| >d1ig8a2 c.55.1.3 (A:225-486) Hexokinase {Baker's yeast (Saccharomyces cerevisiae), pII [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Hexokinase domain: Hexokinase species: Baker's yeast (Saccharomyces cerevisiae), pII [TaxId: 4932]
Probab=100.00 E-value=2.8e-64 Score=493.69 Aligned_cols=240 Identities=35% Similarity=0.553 Sum_probs=224.7
Q ss_pred CcEEEEEEccCcceEEEcccccccCcCCCC----CCCCcEEEeCCCCCCCCCC--CCCchhhhhhhccCCCCCcceeeec
Q 011505 232 DVVAAVILGTGSNAAYVERAQAIPKWHGVP----SKSGEMVINMEWGDFRSSH--LSLSEYDNALDAESLNPGEQIFEKM 305 (484)
Q Consensus 232 ~~~iglIlGTG~Na~yie~~~~i~k~~~~~----~~~g~miIN~EwG~f~~~~--lp~T~~D~~lD~~s~npg~q~fEkm 305 (484)
||.||+|+|||||+||+|+.++|+|+++.. +..++|+||||||+|++.+ +|+|+||++||+.|.|||+|+||||
T Consensus 1 dt~iGlIlGTG~NacY~e~~~~i~k~~~~~~~~~~~~~~miINtEwG~F~~~~~~lp~T~~D~~lD~~S~~Pg~Q~fEKm 80 (262)
T d1ig8a2 1 ETKMGVIFGTGVNGAYYDVCSDIEKLQGKLSDDIPPSAPMAINCEYGSFDNEHVVLPRTKYDITIDEESPRPGQQTFEKM 80 (262)
T ss_dssp TEEEEEEESSSEEEEEEEEGGGCGGGTTCSCTTSCTTCEEEEECCGGGTTTTCSSSCCCHHHHHHHHHSSSTTSSHHHHH
T ss_pred CcEEEEEEeCcEEEEEEEEhhcCccccCcccccCCCCCcEEEEeeeccCCCCCccCCCChhhHHHhhcCCCCCCceeeee
Confidence 689999999999999999999999998753 3568999999999997654 8999999999999999999999999
Q ss_pred cccccHHHHHHHHHHHHHhccccCCCCCCCCCCCCCccChhhhhhcccCCCCChHHHHHHHHHhhCCCCCCHHHHHHHHH
Q 011505 306 ISGMYLGEIVRRVLLRMAQEAAFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVE 385 (484)
Q Consensus 306 ~SG~YLgei~R~il~~~~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~ 385 (484)
+||||||||+|++|+++++++.||++..|+.|.+||+|+|+++|.++.|+++++..+.+++.+.+++ +++.+|++.+|+
T Consensus 81 iSG~YLGElvRlvl~~l~~~~~lF~~~~~~~L~~~~~l~t~~ls~i~~d~~~~~~~~~~~l~~~~~~-~~t~~d~~~vr~ 159 (262)
T d1ig8a2 81 SSGYYLGEILRLALMDMYKQGFIFKNQDLSKFDKPFVMDTSYPARIEEDPFENLEDTDDLFQNEFGI-NTTVQERKLIRR 159 (262)
T ss_dssp HCGGGHHHHHHHHHHHHHHTTSSSTTCCCTTTSSTTSSCTHHHHHHHHCCSTTCHHHHHHHHHHHCC-CCCHHHHHHHHH
T ss_pred hhhccHHHHHHHHHHHHHHhccccCCCCcHhhcCCCCccchhHhhhhcCCCccHHHHHHHHHHhcCC-CCCHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999 499999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCcceEEEEeceeeccchhHHHHHHHHHHHHhcccC----CccEEEEE
Q 011505 386 LCNIVATRGARLAAAGILGVLKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEEL----FKNIVIEH 461 (484)
Q Consensus 386 i~~~V~~RaA~l~Aa~iaaii~~~~~~~~~~~~~~~~~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~~----~~~v~i~~ 461 (484)
||++|.+|||+|+|++|+||++++++ ++.+||+|||+|++||.|++.++++++++++... ..+|+|++
T Consensus 160 i~~~V~~RaA~L~Aa~iaai~~~~~~--------~~~~VavDGSv~~~~p~f~~~~~~~l~~l~~~~~~~~~~~~v~l~~ 231 (262)
T d1ig8a2 160 LSELIGARAARLSVCGIAAICQKRGY--------KTGHIAADGSVYNRYPGFKEKAANALKDIYGWTQTSLDDYPIKIVP 231 (262)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHHHHTC--------SSEEEEEESHHHHHSTTHHHHHHHHHHHHHTCCCCSGGGCSEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCC--------CCcEEEEeeeeeecCccHHHHHHHHHHHHhhhhhccCCCceEEEEE
Confidence 99999999999999999999999987 3589999999999999999999999999987432 24799999
Q ss_pred cCChhHHHHHHHHHHhccc
Q 011505 462 SNDGSGIGAALLAASHSKY 480 (484)
Q Consensus 462 ~~Dgs~iGAAl~Aa~~~~~ 480 (484)
++||||+|||++||++++.
T Consensus 232 a~DGSg~GAAl~Aa~a~~~ 250 (262)
T d1ig8a2 232 AEDGSGAGAAVIAALAQKR 250 (262)
T ss_dssp CCCTTTHHHHHHHHHHHHH
T ss_pred ccCccHHHHHHHHHHHHHH
Confidence 9999999999999999865
|
| >d1bdga2 c.55.1.3 (A:223-460) Hexokinase {Blood fluke (Schistosoma mansoni) [TaxId: 6183]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Hexokinase domain: Hexokinase species: Blood fluke (Schistosoma mansoni) [TaxId: 6183]
Probab=100.00 E-value=2.9e-64 Score=487.06 Aligned_cols=233 Identities=33% Similarity=0.596 Sum_probs=221.0
Q ss_pred CcEEEEEEccCcceEEEcccccccCcCCCCCCCCcEEEeCCCCCCCCC---CCCCchhhhhhhccCCCCCcceeeecccc
Q 011505 232 DVVAAVILGTGSNAAYVERAQAIPKWHGVPSKSGEMVINMEWGDFRSS---HLSLSEYDNALDAESLNPGEQIFEKMISG 308 (484)
Q Consensus 232 ~~~iglIlGTG~Na~yie~~~~i~k~~~~~~~~g~miIN~EwG~f~~~---~lp~T~~D~~lD~~s~npg~q~fEkm~SG 308 (484)
.|.||+|+|||||+||+|+.++|+|+++. ..++|+||||||+||++ .+|+|+||+++|++|.|||+|+||||+||
T Consensus 1 rc~iGlIlGTG~Nacy~e~~~~i~k~~~~--~~~~miIN~EwG~Fg~~~~l~lp~T~~D~~lD~~S~~pg~q~fEkmiSG 78 (237)
T d1bdga2 1 KCAVGLIVGTGTNVAYIEDSSKVELMDGV--KEPEVVINTEWGAFGEKGELDCWRTQFDKSMDIDSLHPGKQLYEKMVSG 78 (237)
T ss_dssp TEEEEEEESSSEEEEEEEETTTCGGGCSC--SSSEEEEECCGGGTTTTSTTTTTCCHHHHHHHHTSSSTTSCTTHHHHSH
T ss_pred CceEEEEEeCCeeEEEEEEhhcCccccCC--CCCcEEEEcccccCCCCCCCCCCCChHhHHHhhcCCCCCcchhhhhhhh
Confidence 48999999999999999999999999874 46789999999999876 48999999999999999999999999999
Q ss_pred ccHHHHHHHHHHHHHhccccCCCCCCCCCCCCCccChhhhhhcccCCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHH
Q 011505 309 MYLGEIVRRVLLRMAQEAAFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELCN 388 (484)
Q Consensus 309 ~YLgei~R~il~~~~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~i~~ 388 (484)
+|||||+|++|.++++++.||++..|+.|.++++|+|++|+.|+.|+++++..+..++.+.|+++.++.+|++.+++||+
T Consensus 79 ~YLGEl~Rlil~~l~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~~l~~~~~~~~~~~~d~~~lr~i~~ 158 (237)
T d1bdga2 79 MYLGELVRHIIVYLVEQKILFRGDLPERLKVRNSLLTRYLTDVERDPAHLLYNTHYMLTDDLHVPVVEPIDNRIVRYACE 158 (237)
T ss_dssp HHHHHHHHHHHHHHHHTTSSGGGCCCSGGGSTTCSCTTHHHHHTTCCTTCCHHHHHHHHHTSCCSSCCHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhcccccCCCCcHhhcCCCccccHHHHHHHhCCCchHHHHHHHHHhccCCCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999998899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCcceEEEEeceeeccchhHHHHHHHHHHHHhcccCCccEEEEEcCChhHH
Q 011505 389 IVATRGARLAAAGILGVLKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVIEHSNDGSGI 468 (484)
Q Consensus 389 ~V~~RaA~l~Aa~iaaii~~~~~~~~~~~~~~~~~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~~~~~v~i~~~~Dgs~i 468 (484)
+|++|||+|+|++|+||++++++ .+.+||+|||+|++||.|+++++++++++++++ .+|+|++++||||+
T Consensus 159 ~V~~RaA~L~Aa~iaai~~~~~~--------~~~~Vg~dGS~~~~~p~y~~~l~~~l~~l~~~~--~~i~l~~a~DGSg~ 228 (237)
T d1bdga2 159 MVVKRAAYLAGAGIACILRRINR--------SEVTVGVDGSLYKFHPKFCERMTDMVDKLKPKN--TRFCLRLSEDGSGK 228 (237)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCC--------SEEEEEEESHHHHHCTTHHHHHHHHHHHHSCTT--CEEEEEECTTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhcCC--------CceEEEEeCchhhcChhHHHHHHHHHHHHcCCC--ceEEEEEccCCcHH
Confidence 99999999999999999999997 458999999999999999999999999998763 57999999999999
Q ss_pred HHHHHHHH
Q 011505 469 GAALLAAS 476 (484)
Q Consensus 469 GAAl~Aa~ 476 (484)
|||++||+
T Consensus 229 GAAl~AA~ 236 (237)
T d1bdga2 229 GAAAIAAS 236 (237)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHhc
Confidence 99999973
|
| >d1czan4 c.55.1.3 (N:671-913) Mammalian type I hexokinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Hexokinase domain: Mammalian type I hexokinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4e-64 Score=487.75 Aligned_cols=239 Identities=33% Similarity=0.552 Sum_probs=218.5
Q ss_pred CcEEEEEEccCcceEEEcccccccCcCCCCCCCCcEEEeCCCCCCCCC---CCCCchhhhhhhccCCCCCcceeeecccc
Q 011505 232 DVVAAVILGTGSNAAYVERAQAIPKWHGVPSKSGEMVINMEWGDFRSS---HLSLSEYDNALDAESLNPGEQIFEKMISG 308 (484)
Q Consensus 232 ~~~iglIlGTG~Na~yie~~~~i~k~~~~~~~~g~miIN~EwG~f~~~---~lp~T~~D~~lD~~s~npg~q~fEkm~SG 308 (484)
.|.||+|+|||||+||+|+.++|+++++ +.++|+||||||+||++ .+|+|+||+++|++|.|||+|+||||+||
T Consensus 1 tc~IGlIlGTGtNacY~e~~~~i~k~~~---~~~~miIN~EwG~Fg~~~~l~~~~T~~D~~lD~~S~~pg~q~fEKmiSG 77 (243)
T d1czan4 1 TCEVGLIVGTGSNACYMEEMKNVEMVEG---DQGQMCINMEWGAFGDNGCLDDIRTHYDRLVDEYSLNAGKQRYEKMISG 77 (243)
T ss_dssp TEEEEEEESSSEEEEEEEETTTCTTSSC---CSSEEEEECCGGGTTTTSTTTTTCCHHHHHHHHTSTTTTSCTTGGGTST
T ss_pred CceEEEEEeCCceEEEEEEcccCccccC---CCCcEEEEeeecCCCCCCccccccCHHhHHhhhcCCCCccchHHHHHcc
Confidence 3789999999999999999999999986 46799999999999876 46999999999999999999999999999
Q ss_pred ccHHHHHHHHHHHHHhccccCCCCCCCCCCCCCccChhhhhhcccCCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHH
Q 011505 309 MYLGEIVRRVLLRMAQEAAFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELCN 388 (484)
Q Consensus 309 ~YLgei~R~il~~~~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~i~~ 388 (484)
+|||||+|++|+++++++.||++..|+.|.++|+|+|++|+.++.|+++.. .++.++.. ++++ ++.+|++.+++||+
T Consensus 78 ~YLGElvRlil~~l~~~~~lf~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~-~~~~i~~~-~~~~-~s~~d~~~lr~i~~ 154 (243)
T d1czan4 78 MYLGEIVRNILIDFTKKGFLFRGQISETLKTRGIFETKFLSQIESDRLALL-QVRAILQQ-LGLN-STCDDSILVKTVCG 154 (243)
T ss_dssp TTHHHHHHHHHHHHHHTTSSGGGCCCTTTTSTTCSCHHHHHHHTCSSCCHH-HHHHHHHH-HTCC-CCHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhcccccCCCCcHHHcCCCCcccHHHHHHHcCCchHH-HHHHHHHH-hCCC-CCHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999987655 67788776 9994 89999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCcceEEEEeceeeccchhHHHHHHHHHHHHhcccCCccEEEEEcCChhHH
Q 011505 389 IVATRGARLAAAGILGVLKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVIEHSNDGSGI 468 (484)
Q Consensus 389 ~V~~RaA~l~Aa~iaaii~~~~~~~~~~~~~~~~~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~~~~~v~i~~~~Dgs~i 468 (484)
+|++|||+|+|++|+||++++++... ...+.++|++|||+|++||.|+++|+++++++.++ .+|+|++++||||+
T Consensus 155 ~V~~RAA~L~Aa~iaail~~~~~~~~--~~~~~~~V~~dGSv~~~~p~f~~~~~~~l~~l~~~---~~i~l~~~~DGSg~ 229 (243)
T d1czan4 155 VVSRRAAQLCGAGMAAVVDKIRENRG--LDRLNVTVGVDGTLYKLHPHFSRIMHQTVKELSPK---CNVSFLLSEDGSGK 229 (243)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTT--CSSEEEEEEEECHHHHHCTTHHHHHHHHHHHHSTT---EEEEEEECSSCSHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccC--CCCCccEEEEECcceecCchHHHHHHHHHHHhCCC---CcEEEEEccCccHH
Confidence 99999999999999999999975321 22345899999999999999999999999998764 58999999999999
Q ss_pred HHHHHHHHhcccc
Q 011505 469 GAALLAASHSKYL 481 (484)
Q Consensus 469 GAAl~Aa~~~~~~ 481 (484)
|||++||+++|.+
T Consensus 230 GAAl~Aa~a~r~~ 242 (243)
T d1czan4 230 GAALITAVGVRLR 242 (243)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc
Confidence 9999999998753
|
| >d1v4sa2 c.55.1.3 (A:219-461) Glucokinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Hexokinase domain: Glucokinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.2e-63 Score=482.25 Aligned_cols=238 Identities=33% Similarity=0.540 Sum_probs=217.8
Q ss_pred CcEEEEEEccCcceEEEcccccccCcCCCCCCCCcEEEeCCCCCCCCCC---CCCchhhhhhhccCCCCCcceeeecccc
Q 011505 232 DVVAAVILGTGSNAAYVERAQAIPKWHGVPSKSGEMVINMEWGDFRSSH---LSLSEYDNALDAESLNPGEQIFEKMISG 308 (484)
Q Consensus 232 ~~~iglIlGTG~Na~yie~~~~i~k~~~~~~~~g~miIN~EwG~f~~~~---lp~T~~D~~lD~~s~npg~q~fEkm~SG 308 (484)
.|.||+|+|||||+||+|+.++|+++++ ..++|+||||||+||+++ +|+|+||+++|+.|.|||+|+||||+||
T Consensus 1 ~c~iGlIlGTG~Nacy~e~~~~i~k~~~---~~~~miINtEwG~fg~~~~l~~~~T~~D~~lD~~s~~Pg~q~fEKmiSG 77 (243)
T d1v4sa2 1 QCEVGMIVGTGCNACYMEEMQNVELVEG---DEGRMCVNTEWGAFGDSGELDEFLLEYDRLVDESSANPGQQLYEKLIGG 77 (243)
T ss_dssp TEEEEEEESSSEEEEEEEEGGGCTTSSC---CSSEEEEECCGGGTTTTSTTTTTCCHHHHHHHHTSSSTTSCHHHHHHCT
T ss_pred CceEEEEEeCCeEEEEEEEcccCcccCC---CCCcEEEEccccccCCCCCCccCcCHHHHHHHhCCCCCCccchhHhHhh
Confidence 4899999999999999999999999986 467999999999998763 6899999999999999999999999999
Q ss_pred ccHHHHHHHHHHHHHhccccCCCCCCCCCCCCCccChhhhhhcccCCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHH
Q 011505 309 MYLGEIVRRVLLRMAQEAAFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELCN 388 (484)
Q Consensus 309 ~YLgei~R~il~~~~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~i~~ 388 (484)
+|||||+|++|+++++++.||++..|+.|.++|+|+|++||.|+.|+++.. ....++.. ++++ ++.+|++.+|+||+
T Consensus 78 ~YLGElvRlil~~l~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~-~~~~~l~~-~~~~-~s~~d~~~lr~i~~ 154 (243)
T d1v4sa2 78 KYMGELVRLVLLRLVDENLLFHGEASEQLRTRGAFETRFVSQVESDTGDRK-QIYNILST-LGLR-PSTTDCDIVRRACE 154 (243)
T ss_dssp TTHHHHHHHHHHHHHHTTCSGGGCCCTGGGSTTCSCHHHHHHHTTCCSSSH-HHHHHHHH-TTCC-CCHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHcccccCCCCcHHhcCCCCcccHHHHHHhcCCccHH-HHHHHHHh-cCCC-CCHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999876554 66777765 8985 79999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCcceEEEEeceeeccchhHHHHHHHHHHHHhcccCCccEEEEEcCChhHH
Q 011505 389 IVATRGARLAAAGILGVLKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVIEHSNDGSGI 468 (484)
Q Consensus 389 ~V~~RaA~l~Aa~iaaii~~~~~~~~~~~~~~~~~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~~~~~v~i~~~~Dgs~i 468 (484)
+|++|||+|+|++|+||++++++... ....+++||+|||||++||.|+++++++++++++. .+|+|++++||||+
T Consensus 155 ~v~~RaA~L~Aa~i~ail~~~~~~~~--~~~~~~~V~~dGSv~~~~p~y~~~l~~~l~~l~~~---~~i~l~~~~DgSg~ 229 (243)
T d1v4sa2 155 SVSTRAAHMCSAGLAGVINRMRESRS--EDVMRITVGVDGSVYKLHPSFKERFHASVRRLTPS---CEITFIESEEGSGR 229 (243)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCC--SSSEEEEEEEECHHHHHSTTHHHHHHHHHHHHCTT---EEEEEEECSSHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccC--CCCcceEEEecchhhhcCchHHHHHHHHHHHhCCC---CcEEEEECCCccHH
Confidence 99999999999999999999987432 23357899999999999999999999999999864 57999999999999
Q ss_pred HHHHHHHHhccc
Q 011505 469 GAALLAASHSKY 480 (484)
Q Consensus 469 GAAl~Aa~~~~~ 480 (484)
|||++||+++|.
T Consensus 230 GAAl~Aa~a~~~ 241 (243)
T d1v4sa2 230 GAALVSAVACKK 241 (243)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhh
Confidence 999999999864
|
| >d1czan2 c.55.1.3 (N:223-465) Mammalian type I hexokinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Hexokinase domain: Mammalian type I hexokinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-63 Score=484.33 Aligned_cols=239 Identities=35% Similarity=0.590 Sum_probs=218.7
Q ss_pred CcEEEEEEccCcceEEEcccccccCcCCCCCCCCcEEEeCCCCCCCCCC---CCCchhhhhhhccCCCCCcceeeecccc
Q 011505 232 DVVAAVILGTGSNAAYVERAQAIPKWHGVPSKSGEMVINMEWGDFRSSH---LSLSEYDNALDAESLNPGEQIFEKMISG 308 (484)
Q Consensus 232 ~~~iglIlGTG~Na~yie~~~~i~k~~~~~~~~g~miIN~EwG~f~~~~---lp~T~~D~~lD~~s~npg~q~fEkm~SG 308 (484)
+|.||+|+|||||+||+|+.++|+++++ ..++|+||||||+||+++ +|+|+||+++|+.|.|||+|+||||+||
T Consensus 1 ~c~iGlIlGTGtNacy~e~~~~i~~~~~---~~~~miINtEwG~Fg~~~~l~~~~T~~D~~lD~~S~~Pg~q~fEKmiSG 77 (243)
T d1czan2 1 HCEVGLIIGTGTNACYMEELRHIDLVEG---DEGRMCINTEWGAFGDDGSLEDIRTEFDRAIDAYSLNPGKQLFEKMVSG 77 (243)
T ss_dssp TEEEEEEESSSEEEEEEEEGGGCTTSSC---CSSEEEEECCGGGTTTTTTTTTTCCHHHHHHHHTSSSTTSSTTHHHHSH
T ss_pred CceEEEEEeCCceEEEEeEcccCCcccC---CCCcEEEEeccccCCCCCcccccCChHHHHHhhcCCCCCCcchhhhhcc
Confidence 5899999999999999999999999886 467899999999998763 6799999999999999999999999999
Q ss_pred ccHHHHHHHHHHHHHhccccCCCCCCCCCCCCCccChhhhhhcccCCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHH
Q 011505 309 MYLGEIVRRVLLRMAQEAAFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELCN 388 (484)
Q Consensus 309 ~YLgei~R~il~~~~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~i~~ 388 (484)
+|||||+|++++++++++.||++..++.|.++++|+|++++.++.|+ +++..++.++.. |+++ ++.+|++.+++||+
T Consensus 78 ~YLGElvRlvl~~l~~~~~lF~~~~~~~l~~~~~l~t~~~s~i~~d~-~~~~~~~~il~~-~~~~-~s~~d~~~lr~i~~ 154 (243)
T d1czan2 78 MYLGELVRLILVKMAKEGLLFEGRITPELLTRGKFNTSDVSAIEKNK-EGLHNAKEILTR-LGVE-PSDDDCVSVQHVCT 154 (243)
T ss_dssp HHHHHHHHHHHHHHHHTTSSGGGCCCTTTTSTTSSCHHHHHHHTCTT-THHHHHHHHHHH-TTCC-CCHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhcccccCCCCCHHHcCCCCcCchHHHHHhcCC-hhHHHHHHHHHH-cCCC-CCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999885 567788888876 9995 89999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCcceEEEEeceeeccchhHHHHHHHHHHHHhcccCCccEEEEEcCChhHH
Q 011505 389 IVATRGARLAAAGILGVLKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVIEHSNDGSGI 468 (484)
Q Consensus 389 ~V~~RaA~l~Aa~iaaii~~~~~~~~~~~~~~~~~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~~~~~v~i~~~~Dgs~i 468 (484)
+|++|||+|+|++|+||+++++.... .+..+++||+|||+|++||.|+++|++++++++++ .+|.|++++||||+
T Consensus 155 ~v~~RAA~L~Aa~iaail~~~~~~~~--~~~~~~~Va~dGSv~~~~p~f~~~~~~~l~~l~~~---~~v~~~~~~DGSg~ 229 (243)
T d1czan2 155 IVSFRSANLVAATLGAILNRLRDNKG--TPRLRTTVGVDGSLYKTHPQYSRRFHKTLRRLVPD---SDVRFLLSESGSGK 229 (243)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHT--CSSEEEEEEEECHHHHHCSSHHHHHHHHHHHHCTT---EEEEEEECTTCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccC--CCCcceEEEEechhhhhCchHHHHHHHHHHHHCCC---CceEEEEccCCcHH
Confidence 99999999999999999999964211 23356899999999999999999999999999975 47999999999999
Q ss_pred HHHHHHHHhcccc
Q 011505 469 GAALLAASHSKYL 481 (484)
Q Consensus 469 GAAl~Aa~~~~~~ 481 (484)
|||++||++.|.+
T Consensus 230 GAAl~Aa~a~r~~ 242 (243)
T d1czan2 230 GAAMVTAVAYRLA 242 (243)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh
Confidence 9999999998753
|
| >d1czan3 c.55.1.3 (N:466-670) Mammalian type I hexokinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Hexokinase domain: Mammalian type I hexokinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.7e-54 Score=405.78 Aligned_cols=186 Identities=38% Similarity=0.595 Sum_probs=169.1
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCC--CCCCcceeecccccCCCCCceeeEEEEEeCCceEEEEEEEeCCCc
Q 011505 41 MKEFEEKCRTPAAKLKQVADAMTVEMHAGLASE--GGSKLKMIISYVDNLPTGDEKGTYYALDLGGTNFRVLRVHLGGKG 118 (484)
Q Consensus 41 l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~--~~s~l~Mlpt~v~~lP~G~E~G~~laiDlGGTnlRv~~V~l~g~~ 118 (484)
++++.++|.++.++|++|+++|++||++||+++ .+|+++||||||+++|+|+|+|.|||||||||||||++|+|.|++
T Consensus 5 ~~~~~~~f~l~~~~L~~i~~~f~~em~~GL~~~~~~~s~l~Mlpt~v~~lPtG~E~G~fLalDlGGTn~Rv~~V~L~g~~ 84 (205)
T d1czan3 5 IEETLAHFHLTKDMLLEVKKRMRAEMELGLRKQTHNNAVVKMLPSFVRRTPDGTENGDFLALDLGGTNFRVLLVKIRSGK 84 (205)
T ss_dssp HHHHHHTTCCCHHHHHHHHHHHHHHHHHHHSHHHHTTCSSCCEECSCCSCCCSCCCEEEEEEEESSSSEEEEEEEEECST
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhcCCCCCcceeeecccCCCCCCCccceEEEEEecCceEEEEEEEecCCC
Confidence 444555556999999999999999999999864 258899999999999999999999999999999999999998776
Q ss_pred ceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCceeeeeeeeeeeeeeecCceEE--------
Q 011505 119 VGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGFTFSFPVMQTSINTGTL-------- 190 (484)
Q Consensus 119 ~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~lGftFSfPv~q~~~~~G~l-------- 190 (484)
.+++...++.|+||.+++++++++||||||+||.+|+++++.. ++.+++|||||||++|+++++|+|
T Consensus 85 ~~~~~~~~~~~~ip~~~~~~~~~eLFd~iA~~i~~fl~~~~~~-----~~~~~lGfTFSFP~~Q~s~~~g~Li~wtKgf~ 159 (205)
T d1czan3 85 KRTVEMHNKIYAIPIEIMQGTGEELFDHIVSCISDFLDYMGIK-----GPRMPLGFTFSFPCQQTSLDAGILITWTKGFK 159 (205)
T ss_dssp TCEEEEEEEEECCCHHHHTSBHHHHHHHHHHHHHHHHHHHTCC-----SSCCEEEEEECSCEEEEETTEEEECCCCTTCC
T ss_pred CceEEEEeeeecCCHHHhcCCHHHHHHHHHHHHHHHHHhcCCC-----CCcccceEEEeceeeccCCCcEEEEEeeCcee
Confidence 6666666678999999999999999999999999999987643 467999999999999999999999
Q ss_pred ----ECccHHHHHHHHHHhc-CCCceEEEEEechHHHHhcccccCC
Q 011505 191 ----VGRDVVEELSRAMAKQ-GLDMSVSALVNDTVGTLAGGRYTNK 231 (484)
Q Consensus 191 ----~G~dv~~~L~~al~r~-gl~v~v~alvNDtvatlla~~y~~~ 231 (484)
+|+||+++|++||+|+ +++|+|+||+|||||||++++|.+|
T Consensus 160 ~~~~~g~dv~~lL~~al~~r~~~~v~v~aivNDTvgTL~s~ay~dP 205 (205)
T d1czan3 160 ATDCVGHDVVTLLRDAIKRREEFDLDVVAVVNDTVGTMMTCAYEEP 205 (205)
T ss_dssp CBSCTTSBHHHHHHHHHHHHTSCCCEEEEEECHHHHHHHHHHTTCT
T ss_pred cCCcccchHHHHHHHHHHhcCCCCceEEEEEEhhHHHHHhhccCCC
Confidence 8999999999999986 6899999999999999999999876
|
| >d1bdga1 c.55.1.3 (A:13-222) Hexokinase {Blood fluke (Schistosoma mansoni) [TaxId: 6183]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Hexokinase domain: Hexokinase species: Blood fluke (Schistosoma mansoni) [TaxId: 6183]
Probab=100.00 E-value=1e-53 Score=402.25 Aligned_cols=190 Identities=37% Similarity=0.589 Sum_probs=170.2
Q ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcC--CCCCCcceeecccccCCCCCceeeEEEEEeCCceEEEEEEE
Q 011505 36 KANGIMKEFEEKCRTPAAKLKQVADAMTVEMHAGLAS--EGGSKLKMIISYVDNLPTGDEKGTYYALDLGGTNFRVLRVH 113 (484)
Q Consensus 36 ~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~--~~~s~l~Mlpt~v~~lP~G~E~G~~laiDlGGTnlRv~~V~ 113 (484)
++.+-+.++.++|.++.++|++|+++|++||++||++ ..+|+++||||||+++|+|+|+|.|||||||||||||++|+
T Consensus 5 ~~~~~v~~~~~~f~l~~~~L~~i~~~f~~em~~GL~~~~~~~s~l~Mlpt~v~~lPtG~E~G~fLalDlGGTn~Rv~~V~ 84 (208)
T d1bdga1 5 QLFEKVVEILKPFDLSVVDYEEICDRMGESMRLGLQKSTNEKSSIKMFPSYVTKTPNGTETGNFLALDLGGTNYRVLSVT 84 (208)
T ss_dssp HHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHHHHHSHHHHTTCSCCCEECCCCSCCCSCCCEEEEEEEESSSSEEEEEEE
T ss_pred HHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhcCCCCCccceeccccCCCCCCCccceEEEEEecCceEEEEEEE
Confidence 3555666777778899999999999999999999975 23589999999999999999999999999999999999999
Q ss_pred eCCCcceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCceeeeeeeeeeeeeeecCceEE---
Q 011505 114 LGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGFTFSFPVMQTSINTGTL--- 190 (484)
Q Consensus 114 l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~lGftFSfPv~q~~~~~G~l--- 190 (484)
|.|++.. ....++.|+||.+++.+++++||||||+||.+|+++++.. ++.++|||||||||+|+++++|+|
T Consensus 85 L~g~~~~-~~~~~~~~~ip~~~~~~~~~~lFd~iA~~i~~fl~~~~~~-----~~~l~lGfTFSFP~~Q~s~~~g~Li~w 158 (208)
T d1bdga1 85 LEGKGKS-PRIQERTYCIPAEKMSGSGTELFKYIAETLADFLENNGMK-----DKKFDLGFTFSFPCVQKGLTHATLVRW 158 (208)
T ss_dssp ECC-CCC-CEEEEEEECCCTTTTTSBHHHHHHHHHHHHHHHHHHTTCC-----SSCEEEEEEECSCEEEETTTEEEECCC
T ss_pred ecCCCcc-eEEEEEEeeCCHHHccCCHHHHHHHHHHHHHHHHHhcCCC-----CCccccEEEEcCccccCCCCcEEEEec
Confidence 9875432 2223467999999999999999999999999999987643 467999999999999999999999
Q ss_pred ---------ECccHHHHHHHHHHhcCCCceEEEEEechHHHHhcccccCC
Q 011505 191 ---------VGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRYTNK 231 (484)
Q Consensus 191 ---------~G~dv~~~L~~al~r~gl~v~v~alvNDtvatlla~~y~~~ 231 (484)
+|+||+++|++||+|++++|+|+||+|||||||++++|.+|
T Consensus 159 tKgF~~~gv~g~dv~~lL~~al~r~~~~v~v~aivNDTvgTL~a~ay~dP 208 (208)
T d1bdga1 159 TKGFSADGVEGHNVAELLQTELDKRELNVKCVAVVNDTVGTLASCALEDP 208 (208)
T ss_dssp CTTCCCBTCTTSBHHHHHHHHHHTTTCCEEEEEEECHHHHHHHHHHTTCT
T ss_pred cccccCCCccCCcHHHHHHHHHHhcCCCceEEEEEEccHHHHHhhhccCC
Confidence 89999999999999999999999999999999999999876
|
| >d1ig8a1 c.55.1.3 (A:18-224) Hexokinase {Baker's yeast (Saccharomyces cerevisiae), pII [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Hexokinase domain: Hexokinase species: Baker's yeast (Saccharomyces cerevisiae), pII [TaxId: 4932]
Probab=100.00 E-value=7e-53 Score=397.03 Aligned_cols=192 Identities=35% Similarity=0.579 Sum_probs=172.8
Q ss_pred hhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCCCCCCcceeecccccCCCCCceeeEEEEEeCCceEEEEEEE
Q 011505 34 CGKANGIMKEFEEKCRTPAAKLKQVADAMTVEMHAGLASEGGSKLKMIISYVDNLPTGDEKGTYYALDLGGTNFRVLRVH 113 (484)
Q Consensus 34 ~~~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~~s~l~Mlpt~v~~lP~G~E~G~~laiDlGGTnlRv~~V~ 113 (484)
++.+.+.+++|+++|.+|.++|++|+++|++||++||++++ ++++||||||.++|+|+|+|.|||||+|||||||++|+
T Consensus 3 p~~~~~~~~~~~~~f~~~~~~L~~i~~~f~~em~~GL~~~~-~~~~MlPt~v~~lPtG~E~G~flalDlGGTnlRv~~V~ 81 (207)
T d1ig8a1 3 PKELMQQIENFEKIFTVPTETLQAVTKHFISELEKGLSKKG-GNIPMIPGWVMDFPTGKESGDFLAIDLGGTNLRVVLVK 81 (207)
T ss_dssp CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHSTTC-CSSCCEECCCCSCCCSCCEEEEEEEEECSSEEEEEEEE
T ss_pred cHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHccCC-CCCcceeeccCCCCCCCccceEEEEEecCceEEEEEEE
Confidence 45677889999999999999999999999999999999764 78999999999999999999999999999999999999
Q ss_pred eCCCcceeEEeeeeeeecCCCcc-ccCcchhHHHHHHHHHHHHhhcccccccCCCCceeeeeeeeeeeeeeecCceEE--
Q 011505 114 LGGKGVGLINQEFAEVSIPPHLM-TGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGFTFSFPVMQTSINTGTL-- 190 (484)
Q Consensus 114 l~g~~~~i~~~~~~~~~ip~~~~-~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~lGftFSfPv~q~~~~~G~l-- 190 (484)
|+|++...+ ..++++||..++ .++.++||||||+||.+|++++.... ..+.++||||||||++|+++++|+|
T Consensus 82 L~g~~~~~~--~~~~~~ip~~~~~~~~~~~lFd~iA~~i~~f~~e~~~~~---~~~~l~lGfTFSFP~~Q~~i~~g~Li~ 156 (207)
T d1ig8a1 82 LGGDRTFDT--TQSKYRLPDAMRTTQNPDELWEFIADSLKAFIDEQFPQG---ISEPIPLGFTFSFPASQNKINEGILQR 156 (207)
T ss_dssp EESSSCEEE--EEEEEECCTTGGGCSCTHHHHHHHHHHHHHHHHHHCTTC---CCSCEEEEEECCSSEECSBTTCCEECC
T ss_pred EcCCCceEE--eeeeeeCCHHHhcCCcHHHHHHHHHHHHHHHHHHhcccc---cCCcceeEEEEeceeecCCCCcEEEEe
Confidence 987654333 335699999876 45688999999999999999875431 2467999999999999999999999
Q ss_pred ----------ECccHHHHHHHHHHhcCCCceEEEEEechHHHHhcccccCC
Q 011505 191 ----------VGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRYTNK 231 (484)
Q Consensus 191 ----------~G~dv~~~L~~al~r~gl~v~v~alvNDtvatlla~~y~~~ 231 (484)
+|+||+++|++||+|+|+||+|+||+|||||||++++|.+|
T Consensus 157 wtKgF~~~~~~G~dv~~lL~~al~r~~~~v~v~aivNDTvgtL~a~~y~dP 207 (207)
T d1ig8a1 157 WTKGFDIPNIENHDVVPMLQKQITKRNIPIEVVALINDTTGTLVASYYTDP 207 (207)
T ss_dssp CCTTCCCTTCTTSBHHHHHHHHHHHTTCCEEEEEEECHHHHHHHHHHHHCT
T ss_pred eeccccccCcCCCcHHHHHHHHHHHcCCCceEEEEEEhhHHHHHhhccCCC
Confidence 89999999999999999999999999999999999999876
|
| >d1v4sa1 c.55.1.3 (A:14-218) Glucokinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Hexokinase domain: Glucokinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8e-53 Score=396.41 Aligned_cols=187 Identities=37% Similarity=0.629 Sum_probs=168.3
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCCC--CCCcceeecccccCCCCCceeeEEEEEeCCceEEEEEEEeCCC
Q 011505 40 IMKEFEEKCRTPAAKLKQVADAMTVEMHAGLASEG--GSKLKMIISYVDNLPTGDEKGTYYALDLGGTNFRVLRVHLGGK 117 (484)
Q Consensus 40 ~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~--~s~l~Mlpt~v~~lP~G~E~G~~laiDlGGTnlRv~~V~l~g~ 117 (484)
+++++.++|.++.++|++|+++|++||++||+++. .|+++||||||+++|+|+|+|.|||||||||||||++|+|+++
T Consensus 2 ~v~~~~~~f~l~~~~L~~i~~~f~~em~~GL~~~~~~~ssl~MlPt~v~~lPtG~E~G~flalDlGGTn~Rv~~V~L~~~ 81 (205)
T d1v4sa1 2 LVEQILAEFQLQEEDLKKVMRRMQKEMDRGLRLETHEEASVKMLPTYVRSTPEGSEVGDFLSLDLGGTNFRVMLVKVGEG 81 (205)
T ss_dssp HHHHHHGGGCCCHHHHHHHHHHHHHHHHHHHSTTTTTTCSSCCEEEEEESCCCCCCCEEEEEEEESSSEEEEEEEEECCC
T ss_pred hHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhccCCCCcceeeeeecccCCCCcccceEEEEecCCceEEEEEEEeCCC
Confidence 46778888889999999999999999999998543 5789999999999999999999999999999999999999654
Q ss_pred c--ceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCceeeeeeeeeeeeeeecCceEE-----
Q 011505 118 G--VGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGFTFSFPVMQTSINTGTL----- 190 (484)
Q Consensus 118 ~--~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~lGftFSfPv~q~~~~~G~l----- 190 (484)
+ ...++...++|+||++++++++++||||||+||.+|+++++.. ++++|+|||||||++|+++++|+|
T Consensus 82 ~~~~~~~~~~~~~~~ip~~~~~~t~~~LFd~iA~~i~~fl~~~~~~-----~~~lplGfTFSFP~~Q~sl~~g~Li~wtK 156 (205)
T d1v4sa1 82 EEGQWSVKTKHQMYSIPEDAMTGTAEMLFDYISECISDFLDKHQMK-----HKKLPLGFTFSFPVRHEDIDKGILLNWTK 156 (205)
T ss_dssp SSSCCEEEEEEEEEECCSTTTSSBHHHHHHHHHHHHHHHHHTTTCT-----TCCCEEEEEECSCEEEEETTEEEECCCCT
T ss_pred CCCCceeEEEeecccCChhhccCCHHHHHHHHHHHHHHHHHhhCCC-----CCccccEEEEcCccccCCCCcEEEEEccc
Confidence 2 2344445567999999999999999999999999999987642 467999999999999999999999
Q ss_pred -------ECccHHHHHHHHHHhcC-CCceEEEEEechHHHHhcccccCC
Q 011505 191 -------VGRDVVEELSRAMAKQG-LDMSVSALVNDTVGTLAGGRYTNK 231 (484)
Q Consensus 191 -------~G~dv~~~L~~al~r~g-l~v~v~alvNDtvatlla~~y~~~ 231 (484)
+|+||+++|+++++|++ ++|+|+||+|||||||++++|.+.
T Consensus 157 gf~~~~~~g~dv~~lL~~al~r~~~~~v~v~aivNDTvgTL~s~ay~dn 205 (205)
T d1v4sa1 157 GFKASGAEGNNVVGLLRDAIKRRGDFEMDVVAMVNDTVATMISCYYEDH 205 (205)
T ss_dssp TCCCBTCTTSBHHHHHHHHHTTTCSCCCEEEEEECHHHHHHHHHHTTCT
T ss_pred ccccCccccchHHHHHHHHHHhcCCCCceEEEEEEchHHHHHhhhccCC
Confidence 89999999999999986 899999999999999999999863
|
| >d1czan1 c.55.1.3 (N:16-222) Mammalian type I hexokinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Hexokinase domain: Mammalian type I hexokinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.8e-53 Score=397.91 Aligned_cols=186 Identities=33% Similarity=0.587 Sum_probs=170.0
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcCCC--CCCcceeecccccCCCCCceeeEEEEEeCCceEEEEEEEeCCC
Q 011505 40 IMKEFEEKCRTPAAKLKQVADAMTVEMHAGLASEG--GSKLKMIISYVDNLPTGDEKGTYYALDLGGTNFRVLRVHLGGK 117 (484)
Q Consensus 40 ~l~~~~~~~~~~~~~L~~i~~~f~~em~~gL~~~~--~s~l~Mlpt~v~~lP~G~E~G~~laiDlGGTnlRv~~V~l~g~ 117 (484)
-+++|.++|.++.++|++|+++|++||++||+++. .|+++||||||+++|+|+|+|.|||||||||||||++|+|.|+
T Consensus 6 ~v~~~l~~f~l~~~~L~~i~~~f~~em~~GL~~~~~~~s~i~Mlpt~v~~lP~G~E~G~flalDlGGTn~Rv~~V~L~g~ 85 (207)
T d1czan1 6 KIDKYLYAMRLSDETLIDIMTRFRKEMKNGLSRDFNPTATVKMLPTFVRSIPDGSEKGDFIALDLGGSSFRILRVQVNHE 85 (207)
T ss_dssp HHHHHTGGGSCCHHHHHHHHHHHHHHHHHHHCTTTGGGCSSCCEECCCCSCCCSCCCEEEEEEEESSSSEEEEEEEEEEE
T ss_pred HHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhhcCCCCCcceeeeccccCCCCccccceEEEEecCCceEEEEEEEeCCC
Confidence 34667777789999999999999999999998763 4889999999999999999999999999999999999999876
Q ss_pred cceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCceeeeeeeeeeeeeeecCceEE-------
Q 011505 118 GVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGFTFSFPVMQTSINTGTL------- 190 (484)
Q Consensus 118 ~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~lGftFSfPv~q~~~~~G~l------- 190 (484)
+...+.+.++.|+||.+++++++++||||||+||.+|+++++.. +..+|+|||||||++|+++++|+|
T Consensus 86 ~~~~~~~~~~~~~ip~~~~~~~~~~lFd~IA~~i~~fl~~~~~~-----~~~l~lGfTFSFP~~Q~sl~~g~Li~wtKgF 160 (207)
T d1czan1 86 KNQNVHMESEVYDTPENIVHGSGSQLFDHVAECLGDFMEKRKIK-----DKKLPVGFTFSFPCQQSKIDEAILITWTKRF 160 (207)
T ss_dssp TTEEEEEEEEEECCCHHHHSSBHHHHHHHHHHHHHHHHHHHTCT-----TSCCCEEEEECSCEECSSTTCCEECCCCTTC
T ss_pred CCccEEEEEEeecCCHHHhcCCHHHHHHHHHHHHHHHHHhcCcC-----CCCCccEEEEcCeeccCCCCcEEEEeccccC
Confidence 65566666677999999999999999999999999999987643 467999999999999999999999
Q ss_pred -----ECccHHHHHHHHHHhcC-CCceEEEEEechHHHHhcccccC
Q 011505 191 -----VGRDVVEELSRAMAKQG-LDMSVSALVNDTVGTLAGGRYTN 230 (484)
Q Consensus 191 -----~G~dv~~~L~~al~r~g-l~v~v~alvNDtvatlla~~y~~ 230 (484)
+|+||+++|++||+|+| +||+|+||+|||||||++++|.|
T Consensus 161 ~~~~v~G~dv~~lL~~al~r~~~~~v~v~aivNDTvgTL~s~aY~D 206 (207)
T d1czan1 161 KASGVEGADVVKLLNKAIKKRGDYDANIVAVVNDTVGTMMTCGYDD 206 (207)
T ss_dssp CCBTCTTSBHHHHHHHHHHHHCSCCCCEEEEECHHHHHHHHHHHHC
T ss_pred ccCCCCCCcHHHHHHHHHHhcCCCCceEEEEEEchHHHHHHhhccC
Confidence 79999999999999986 89999999999999999999976
|
| >d1z05a2 c.55.1.10 (A:209-405) Transcriptional regulator VC2007 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: ROK domain: Transcriptional regulator VC2007 species: Vibrio cholerae [TaxId: 666]
Probab=99.70 E-value=5.2e-17 Score=150.15 Aligned_cols=179 Identities=16% Similarity=0.115 Sum_probs=138.7
Q ss_pred CCCcEEEEEEccCcceEEEcccccccCcCCCCCCCCcEEEeCCCCCCCCCCCCCchhhhhhhccCCCCCcceeeeccccc
Q 011505 230 NKDVVAAVILGTGSNAAYVERAQAIPKWHGVPSKSGEMVINMEWGDFRSSHLSLSEYDNALDAESLNPGEQIFEKMISGM 309 (484)
Q Consensus 230 ~~~~~iglIlGTG~Na~yie~~~~i~k~~~~~~~~g~miIN~EwG~f~~~~lp~T~~D~~lD~~s~npg~q~fEkm~SG~ 309 (484)
+-++.+.+++|||++++++.+++.+.+.++.++|.|||.|+.+.-.|. |++. +|+|.++|+.
T Consensus 1 d~~n~v~i~igtGiG~giv~~g~l~~G~~g~AGEiGh~~v~~~g~~c~----------------cG~~--GclE~~~S~~ 62 (197)
T d1z05a2 1 DVDNSVLISIHHGLGAGIVLDGRVLQGRHGNIGELGHIQIDPQGKRCH----------------CGNY--GCLETVASSQ 62 (197)
T ss_dssp TCSSEEEEEESSSEEEEEEETTEECCTTTTCTTBCTTSBCCTTCCBCT----------------TSCB--SBTHHHHSHH
T ss_pred CCccEEEEEECCCEEEEEEECCEEEeCCCCCCcccccCcccccccccc----------------CCCC--CchHHHhcHH
Confidence 357899999999999999999999999999999999999987744453 7777 5999999999
Q ss_pred cHHHHHHHHHHHHHhccccCCCCCCCCCCCCCccChhhhhhcccCCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHHH
Q 011505 310 YLGEIVRRVLLRMAQEAAFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELCNI 389 (484)
Q Consensus 310 YLgei~R~il~~~~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~i~~~ 389 (484)
.|-+.++..+... .++.+.....+ ..+++++. ++..++.|..
T Consensus 63 al~~~~~~~~~~~----------~~~~~~~~~~~-----------------~~~~l~~~-----------a~~gd~~a~~ 104 (197)
T d1z05a2 63 AIRDQVTARIQAG----------EPSCLATVEEI-----------------SIEDICAA-----------AADGDPLAVD 104 (197)
T ss_dssp HHHHHHHHHHHTT----------CCCTTTTCSSC-----------------CHHHHHHH-----------HHTTCHHHHH
T ss_pred HHHHHHHHHHhcC----------Cccccccchhc-----------------CHHHHHHH-----------HHcCCHHHHH
Confidence 9966555433221 12212111111 12334433 5566689999
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcCCCCCcceEEEEeceeeccchhHHHHHHHHHHHHhcccCCccEEEEE---cCChh
Q 011505 390 VATRGARLAAAGILGVLKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVIEH---SNDGS 466 (484)
Q Consensus 390 V~~RaA~l~Aa~iaaii~~~~~~~~~~~~~~~~~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~~~~~v~i~~---~~Dgs 466 (484)
+++++++++|.+|++++..++| ..|.++|++.+..+.|.+.+++.+++...+.....++|+. .+|++
T Consensus 105 ~~~~~~~~la~~i~nl~~~ldP----------~~IviGG~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~I~~s~lg~~a~ 174 (197)
T d1z05a2 105 VIQQLGRYLGAAIAIVINLFNP----------EKILIGGVINQAKSILYPSIEQCIREQSLPVYHQDLKLVESRFYKQAT 174 (197)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCC----------SEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSCSSCTT
T ss_pred HHHHHHHHHHHHHHhHHHhcCC----------CEEEEecchHHhhHHHHHHHHHHHHHhcccccCCCCEEEECCCCCcHH
Confidence 9999999999999999999999 6888999999999999999999999876543334566665 78999
Q ss_pred HHHHHHHH
Q 011505 467 GIGAALLA 474 (484)
Q Consensus 467 ~iGAAl~A 474 (484)
.+|||+++
T Consensus 175 ~~GAA~l~ 182 (197)
T d1z05a2 175 MPGAALIK 182 (197)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999886
|
| >d1sz2a1 c.55.1.7 (A:3-321) Glucokinase Glk {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Glucokinase domain: Glucokinase Glk species: Escherichia coli [TaxId: 562]
Probab=99.69 E-value=2.3e-16 Score=155.07 Aligned_cols=291 Identities=12% Similarity=0.104 Sum_probs=171.6
Q ss_pred eEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCceeeeee
Q 011505 96 TYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGFT 175 (484)
Q Consensus 96 ~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~lGft 175 (484)
++|++|+||||+|+++|+.+++ .+.+. ..+|+. +.+++ .+.|++++++++. +...+|+.
T Consensus 2 y~L~~DIGGT~ir~glvd~~~~--~i~~~----~~~~~~----~~~~~----~~~i~~~~~~~~~-------~~~~igI~ 60 (319)
T d1sz2a1 2 YALVGDVGGTNARLALCDIASG--EISQA----KTYSGL----DYPSL----EAVIRVYLEEHKV-------EVKDGCIA 60 (319)
T ss_dssp EEEEEEEETTEEEEEEEETTTC--CEEEE----EEEEGG----GCSCH----HHHHHHHHHHSCC-------CCCEEEEE
T ss_pred EEEEEEEChhheeeEEEECCCC--EEEEE----EEeCCC----CHhHH----HHHHHHHHHhcCC-------CcceEEEE
Confidence 7899999999999999987654 23321 123332 12333 3455667766543 35678999
Q ss_pred eeeeeeeeecCceEE----ECccHHHHHHHHHHhcCCCceEEEEEechHHHHhcccc------------cCCCcEEEEEE
Q 011505 176 FSFPVMQTSINTGTL----VGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRY------------TNKDVVAAVIL 239 (484)
Q Consensus 176 FSfPv~q~~~~~G~l----~G~dv~~~L~~al~r~gl~v~v~alvNDtvatlla~~y------------~~~~~~iglIl 239 (484)
+++|++ .+++++ ........++..+ ..+ +.+.||..+......+ ...+..+.+++
T Consensus 61 ~pG~vd---~~~~~~~~~~~~~~~~~~~~~~~---~~~---v~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i 131 (319)
T d1sz2a1 61 IACPIT---GDWVAMTNHTWAFSIAEMKKNLG---FSH---LEIINDFTAVSMAIPMLKKEHLIQFGGAEPVEGKPIAVY 131 (319)
T ss_dssp ESSCCC---SSEECCSSSCCCEEHHHHHHHHT---CSE---EEEEEHHHHHHHHGGGCCGGGEEECSSCCCCTTCCEEEE
T ss_pred cccCCC---CCcccccccccccChHHHHHhhc---ccc---eeecceeeeeehhhhhhhhhhHHhhCcccCCCcceEEEE
Confidence 999998 555655 2233444444333 233 5689999888876543 24566777888
Q ss_pred ccCcceEEEcccccccCcCCCCCCCCcEEEeCCCCCCCCCCCCCchhhhhhhccCCCCCcceeeeccccccHHHHHHHHH
Q 011505 240 GTGSNAAYVERAQAIPKWHGVPSKSGEMVINMEWGDFRSSHLSLSEYDNALDAESLNPGEQIFEKMISGMYLGEIVRRVL 319 (484)
Q Consensus 240 GTG~Na~yie~~~~i~k~~~~~~~~g~miIN~EwG~f~~~~lp~T~~D~~lD~~s~npg~q~fEkm~SG~YLgei~R~il 319 (484)
|||++++.......+.+..+.+++.||+.+...+... .........|.+. .|+|.++||+.|-++.+...
T Consensus 132 ~~g~G~g~~~~~~~~~g~~~~agE~G~~~~~~~~~~~--------~~~~~~~~~~g~~--g~~E~~~Sg~~l~~~~~~~~ 201 (319)
T d1sz2a1 132 GAGTGLGVAHLVHVDKRWVSLPGEGGHVDFAPNSEEE--------AIILEILRAEIGH--VSAERVLSGPGLVNLYRAIV 201 (319)
T ss_dssp EESSSEEEEEEEEETTEEEEEECCGGGSBCCCCSHHH--------HHHHHHHHHHSSS--CBGGGTSSHHHHHHHHHHHH
T ss_pred cccccceEEEEecccCCcccccccccccccCCcchhh--------ccchhhhhhcCCc--ceeeeeccchhHHHHHHHHH
Confidence 8888888777766666666666677776554332111 0011111245666 69999999999977766643
Q ss_pred HHHHhccccCCCCCCCCCCCCCccChhhhhhcccCCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 011505 320 LRMAQEAAFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELCNIVATRGARLAA 399 (484)
Q Consensus 320 ~~~~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~i~~~V~~RaA~l~A 399 (484)
..- + .+... . .+....... ....+..|+.+.++.+.+++
T Consensus 202 ~~~---~------~~~~~-----~-------------~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~ 240 (319)
T d1sz2a1 202 KAD---N------RLPEN-----L-------------KPKDITERA--------------LADSCTDCRRALSLFCVIMG 240 (319)
T ss_dssp HHT---T------CCCCC-----C-------------CHHHHHHHH--------------HHTCCHHHHHHHHHHHHHHH
T ss_pred hhc---C------CCchh-----c-------------cchHHHHHH--------------hhcchHHHHHHHHHHHHHHH
Confidence 331 0 01000 0 000011111 12223677888888888888
Q ss_pred HHHHHHHHHhCCCCcCCCCCcceEEEEeceeeccchhHHH--HHHHHHHHH--hccc-CCccEEEEEcCChhHHHHHHHH
Q 011505 400 AGILGVLKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSK--CLENTLEEL--LGEE-LFKNIVIEHSNDGSGIGAALLA 474 (484)
Q Consensus 400 a~iaaii~~~~~~~~~~~~~~~~~I~vdGsv~~~~p~f~~--~l~~~l~~l--~~~~-~~~~v~i~~~~Dgs~iGAAl~A 474 (484)
..++.++..+.+. ..|.+.||+......+.. .+.+.+.+. ..+. ....|.+.+.+|++++|||..|
T Consensus 241 ~~~~~~~~~~~~~---------~~ivigGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~dagl~GAa~~a 311 (319)
T d1sz2a1 241 RFGGNLALNLGTF---------GGVFIAGGIVPRFLEFFKASGFRAAFEDKGRFKEYVHDIPVYLIVHDNPGLLGSGAHL 311 (319)
T ss_dssp HHHHHHHHHHTCT---------TEEEEECSSSGGGHHHHHHSSHHHHHHCCGGGHHHHTTCCEEEECCSCHHHHHHHHHH
T ss_pred HHHHhhhheecCC---------CCcEEecchhhhhhhhhchHHHHHHHHhccchhhHhhCCcEEEEECCchhHHHHHHHH
Confidence 8888777767652 357777888776543332 122332211 1010 0124666679999999999877
Q ss_pred HH
Q 011505 475 AS 476 (484)
Q Consensus 475 a~ 476 (484)
..
T Consensus 312 ~~ 313 (319)
T d1sz2a1 312 RQ 313 (319)
T ss_dssp HH
T ss_pred HH
Confidence 53
|
| >d1z6ra3 c.55.1.10 (A:211-406) Mlc protein {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: ROK domain: Mlc protein species: Escherichia coli [TaxId: 562]
Probab=99.58 E-value=2.6e-15 Score=138.29 Aligned_cols=176 Identities=14% Similarity=0.079 Sum_probs=134.7
Q ss_pred CCcEEEEEEccCcceEEEcccccccCcCCCCCCCCcEEEeCCCCCCCCCCCCCchhhhhhhccCCCCCcceeeecccccc
Q 011505 231 KDVVAAVILGTGSNAAYVERAQAIPKWHGVPSKSGEMVINMEWGDFRSSHLSLSEYDNALDAESLNPGEQIFEKMISGMY 310 (484)
Q Consensus 231 ~~~~iglIlGTG~Na~yie~~~~i~k~~~~~~~~g~miIN~EwG~f~~~~lp~T~~D~~lD~~s~npg~q~fEkm~SG~Y 310 (484)
.++++.+.+|||++++++.+++.+++.++.++|.|||.|+.+.-.|. |++. +|+|.++|+..
T Consensus 2 ~~n~~~i~ig~GiG~gii~ng~l~~G~~g~aGEiGh~~v~~~g~~c~----------------cG~~--gcle~~~s~~a 63 (196)
T d1z6ra3 2 ARDVIQVVIDHNVGAGVITDGHLLHAGSSSLVEIGHTQVDPYGKRCY----------------CGNH--GCLETIASVDS 63 (196)
T ss_dssp CSSEEEEEESSSEEEEEEETTEETTTTSSCCBCGGGSBSCTTSCBCT----------------TSCB--SBTHHHHSHHH
T ss_pred CceEEEEEECCCeEEEEEECCEEEECCCCCCcccccccccccccccc----------------cccc--chHHHhcCHHH
Confidence 46789999999999999999999999999999999999987744453 7777 59999999999
Q ss_pred HHHHHHHHHHHHHhccccCCCCCCCCCCCCCccChhhhhhcccCCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHH
Q 011505 311 LGEIVRRVLLRMAQEAAFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELCNIV 390 (484)
Q Consensus 311 Lgei~R~il~~~~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~i~~~V 390 (484)
|-+..+....+ ...+.+ ..+ ..+ ..++++. ++..+..+..+
T Consensus 64 l~~~~~~~~~~----------~~~~~l--------------~~~-~~~---~~~~~~~-----------~~~gd~~a~~i 104 (196)
T d1z6ra3 64 ILELAQLRLNQ----------SMSSML--------------HGQ-PLT---VDSLCQA-----------ALRGDLLAKDI 104 (196)
T ss_dssp HHHHHHHHHTT----------CTTCGG--------------GSS-CCC---HHHHHHH-----------HHTTCHHHHHH
T ss_pred HHHHHHHhhcc----------ccchhc--------------cCC-cCC---HHHHHHH-----------HHccCHHHHHH
Confidence 96655432111 001111 011 011 2233333 55566889999
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCcCCCCCcceEEEEeceeeccchhHHHHHHHHHHHHhcccCCccEEEEE---cCChhH
Q 011505 391 ATRGARLAAAGILGVLKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVIEH---SNDGSG 467 (484)
Q Consensus 391 ~~RaA~l~Aa~iaaii~~~~~~~~~~~~~~~~~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~~~~~v~i~~---~~Dgs~ 467 (484)
++++++.+|.+|++++..++| ..|.++|++.+..|.|.+.+++.+++.+.+.....+.|+. .+|++.
T Consensus 105 ~~~~~~~la~~i~~l~~~ldP----------~~IvigG~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~I~~s~l~~~a~~ 174 (196)
T d1z6ra3 105 ITGVGAHVGRILAIMVNLFNP----------QKILIGSPLSKAADILFPVISDSIRQQALPAYSQHISVESTQFSNQGTM 174 (196)
T ss_dssp HHHHHHHHHHHHHHHHHHHCC----------SEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSCCCCTTT
T ss_pred HHHHHHHHHHHHHHHHHHhCC----------CEEEEecchhhhhHHHHHHHHHHHHHhcccccCCCcEEEECCCCChHHH
Confidence 999999999999999999999 6899999999999999999999998876543334555654 889999
Q ss_pred HHHHHH
Q 011505 468 IGAALL 473 (484)
Q Consensus 468 iGAAl~ 473 (484)
+|||++
T Consensus 175 ~GAAll 180 (196)
T d1z6ra3 175 AGAALV 180 (196)
T ss_dssp THHHHH
T ss_pred HHHHHH
Confidence 999875
|
| >d2ap1a1 c.55.1.10 (A:118-303) Putative regulator protein YcfX {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: ROK domain: Putative regulator protein YcfX species: Salmonella typhimurium [TaxId: 90371]
Probab=99.52 E-value=3.9e-15 Score=135.45 Aligned_cols=179 Identities=18% Similarity=0.177 Sum_probs=128.4
Q ss_pred ccCCCcEEEEEEccCcceEEEcccccccCcCCCCCCCCcEEEeCCCCCCCCCCCCCchhhhhhhccCCCCCcceeeeccc
Q 011505 228 YTNKDVVAAVILGTGSNAAYVERAQAIPKWHGVPSKSGEMVINMEWGDFRSSHLSLSEYDNALDAESLNPGEQIFEKMIS 307 (484)
Q Consensus 228 y~~~~~~iglIlGTG~Na~yie~~~~i~k~~~~~~~~g~miIN~EwG~f~~~~lp~T~~D~~lD~~s~npg~q~fEkm~S 307 (484)
|+++++++++++|||++++++.+++.+.+.++.+++.|||.|+........... ......|++. +|+|.++|
T Consensus 2 ~~~y~~v~~l~~GtGiG~giv~nG~l~~G~~g~AGEiGh~~v~~~~~~~~~~~~------~~~~c~cg~~--gc~e~~~s 73 (186)
T d2ap1a1 2 FTQYPLVMGLILGTGVGGGLVLNGKPITGQSYITGEFGHMRLPVDALTLMGFDF------PLRRCGCGQM--GCIENYLS 73 (186)
T ss_dssp GGGCSEEEEEEESSSEEEEEEETTEEECCTTSCTTCGGGSBCCHHHHHHHCTTS------CCCBCTTSCB--SBTHHHHS
T ss_pred CCCCCEEEEEEEccCeEEEEEECCEEEeCCCCCCceeEEEEECCCCcccccccc------cccccccCch--hhHHhhhh
Confidence 678899999999999999999999999999999999999999654211000000 0001136666 69999999
Q ss_pred cccHHHHHHHHHHHHHhccccCCCCCCCCCCCCCccChhhhhhcccCCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHH
Q 011505 308 GMYLGEIVRRVLLRMAQEAAFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELC 387 (484)
Q Consensus 308 G~YLgei~R~il~~~~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~i~ 387 (484)
+..+.+....... . .++ ...+++. ++..++.+
T Consensus 74 ~~~~~~~~~~~~~--------------~------~~~-----------------~~~~~~~-----------~~~gd~~a 105 (186)
T d2ap1a1 74 GRGFAWLYQHYYD--------------Q------SLQ-----------------APEIIAL-----------WEQGDEQA 105 (186)
T ss_dssp HHHHHHHHHHHHC--------------C------CCC-----------------HHHHHHH-----------HHTTCHHH
T ss_pred hhhHHHHhhhccc--------------c------ccc-----------------hhhHHHH-----------HHhccchH
Confidence 9877443222100 0 011 1122222 44455889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCcceEEEEeceeeccchhHHHHHHHHHHHHhcccCCccEEEEE---cCC
Q 011505 388 NIVATRGARLAAAGILGVLKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVIEH---SND 464 (484)
Q Consensus 388 ~~V~~RaA~l~Aa~iaaii~~~~~~~~~~~~~~~~~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~~~~~v~i~~---~~D 464 (484)
..+++++++.+|.+|++++..++| ..|.++|++... +.|.+.+.+.+++.+.+.. ..++|+. ++|
T Consensus 106 ~~i~~~~~~~la~~i~nl~~~ldP----------e~IvlGG~i~~~-~~~~~~l~~~~~~~~~~~~-~~~~I~~s~lg~~ 173 (186)
T d2ap1a1 106 HAHVERYLDLLAVCLGNILTIVDP----------DLLVIGGGLSNF-TAITTQLAERLPRHLLPVA-RAPRIERARHGDA 173 (186)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCC----------SEEEEESGGGGS-THHHHSSGGGSGGGSCTTC-CCCEEEECSCTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCc----------CEEEECCchhhh-HHHHHHHHHHHHHHhcCcC-CCCEEEECCCCCh
Confidence 999999999999999999999999 678999999765 5577888888877655433 3556654 899
Q ss_pred hhHHHHHHHH
Q 011505 465 GSGIGAALLA 474 (484)
Q Consensus 465 gs~iGAAl~A 474 (484)
++.+|||++|
T Consensus 174 a~~~GAA~la 183 (186)
T d2ap1a1 174 GGMRGAAFLH 183 (186)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHHh
Confidence 9999999876
|
| >d2gupa2 c.55.1.10 (A:115-289) Hypothetical protein SP2142 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: ROK domain: Hypothetical protein SP2142 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.49 E-value=8.8e-14 Score=125.54 Aligned_cols=166 Identities=18% Similarity=0.228 Sum_probs=121.7
Q ss_pred CcEEEEEEccCcceEEEcccccccCcCCCCCCCCcEEEeCCCCCCCCCCCCCchhhhhhhccCCCCCcceeeeccccccH
Q 011505 232 DVVAAVILGTGSNAAYVERAQAIPKWHGVPSKSGEMVINMEWGDFRSSHLSLSEYDNALDAESLNPGEQIFEKMISGMYL 311 (484)
Q Consensus 232 ~~~iglIlGTG~Na~yie~~~~i~k~~~~~~~~g~miIN~EwG~f~~~~lp~T~~D~~lD~~s~npg~q~fEkm~SG~YL 311 (484)
++.+.+++|||++++++.+++.+++.++.++|.|||.+....+.+ .|+|.++|+..|
T Consensus 2 ~n~~~vtlGtGiG~giv~ng~l~~G~~g~AGEiGh~~v~~~~~~~-----------------------~~~e~~~s~~~l 58 (175)
T d2gupa2 2 ENAACVVIGTGIGGAMIINGRLHRGRHGLGGEFGYMTTLAPAEKL-----------------------NNWSQLASTGNM 58 (175)
T ss_dssp SSEEEEEESSSEEEEEEETTEEECCTTSCTTCGGGCBSSCCSSSC-----------------------CBHHHHHSHHHH
T ss_pred ccEEEEEEecceeEEEEECCEEEECCCCCcceeeeeeeccccccc-----------------------ccchhhccchHH
Confidence 578999999999999999999999999999999999886542222 589999999888
Q ss_pred HHHHHHHHHHHHhccccCCCCCCCCCCCCCccChhhhhhcccCCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHH
Q 011505 312 GEIVRRVLLRMAQEAAFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELCNIVA 391 (484)
Q Consensus 312 gei~R~il~~~~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~i~~~V~ 391 (484)
- |++..... .+ .++ .+++++. ++..+..+..++
T Consensus 59 ~---~~~~~~~~----------~~------~~~-----------------~~~l~~~-----------~~~gd~~a~~~~ 91 (175)
T d2gupa2 59 V---RYVIEKSG----------HT------DWD-----------------GRKIYQE-----------AAAGNILCQEAI 91 (175)
T ss_dssp H---HHHHHHHS----------SC------CCC-----------------HHHHHHH-----------HHTTCHHHHHHH
T ss_pred H---HHHHhhcc----------cc------chh-----------------hHHHHHH-----------HHcCCHHHHHHH
Confidence 4 33322210 00 011 1223332 344457888999
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCcCCCCCcceEEEEeceeeccchhHHHHHHHHHHHHhcc--cCCccEEEEE---cCChh
Q 011505 392 TRGARLAAAGILGVLKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGE--ELFKNIVIEH---SNDGS 466 (484)
Q Consensus 392 ~RaA~l~Aa~iaaii~~~~~~~~~~~~~~~~~I~vdGsv~~~~p~f~~~l~~~l~~l~~~--~~~~~v~i~~---~~Dgs 466 (484)
+++++.+|.+|++++..++| ..|.++|++.+ .|.|.+.+++.+++.+.. .......|+. .+|++
T Consensus 92 ~~~~~~la~~i~~~i~~ldp----------~~IvlGG~i~~-~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~s~~~~~a~ 160 (175)
T d2gupa2 92 ERMNRNLAQGLLNIQYLIDP----------GVISLGGSISQ-NPDFIQGVKKAVEDFVDAYEEYTVAPVIQACTYHADAN 160 (175)
T ss_dssp HHHHHHHHHHHHHHHHHHCC----------SEEEEESGGGG-CHHHHHHHHHHHHHHHHHCTTCCSCCCEEECSCSTTHH
T ss_pred HHHHHHHHHHHHHHHHHhcC----------ceEEECCcccc-hHHHHHHHHHHHHHHHhhccccCCCCEEEECCCCCcHH
Confidence 99999999999999999999 68999999865 678889999998876432 1112233444 67999
Q ss_pred HHHHHHHHHHhc
Q 011505 467 GIGAALLAASHS 478 (484)
Q Consensus 467 ~iGAAl~Aa~~~ 478 (484)
.+|||.++....
T Consensus 161 l~GAa~l~l~~~ 172 (175)
T d2gupa2 161 LYGALVNWLQEE 172 (175)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHh
Confidence 999999886543
|
| >d2aa4a2 c.55.1.10 (A:120-289) N-acetylmannosamine kinase NanK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: ROK domain: N-acetylmannosamine kinase NanK species: Escherichia coli [TaxId: 562]
Probab=99.48 E-value=1.6e-14 Score=129.93 Aligned_cols=164 Identities=16% Similarity=0.123 Sum_probs=123.8
Q ss_pred CCcEEEEEEccCcceEEEcccccccCcCCCCCCCCcEEEeCCCCCCCCCCCCCchhhhhhhccCCCCCcceeeecccccc
Q 011505 231 KDVVAAVILGTGSNAAYVERAQAIPKWHGVPSKSGEMVINMEWGDFRSSHLSLSEYDNALDAESLNPGEQIFEKMISGMY 310 (484)
Q Consensus 231 ~~~~iglIlGTG~Na~yie~~~~i~k~~~~~~~~g~miIN~EwG~f~~~~lp~T~~D~~lD~~s~npg~q~fEkm~SG~Y 310 (484)
-++++.+.+|||++++++.+++.+++.++.++|.|||.++.+.-.+. |+++ +|+|.++|+..
T Consensus 2 ~~n~~~i~~g~GiG~giv~ng~l~~G~~g~aGEiGh~~~~~~~~~~~----------------cg~~--gclE~~~s~~a 63 (170)
T d2aa4a2 2 ITDMVFITVSTGVGGGVVSGCKLLTGPGGLAGHIGHTLADPHGPVCG----------------CGRT--GCVEAIASGRG 63 (170)
T ss_dssp CCCEEEEEESSSEEEEEEETTEEECCTTSCCCCGGGSBSCTTSCBCT----------------TSCB--SBHHHHHSHHH
T ss_pred CceEEEEEECCCEEEEEEECCEEEECCCCCCCceeeeeecccccccC----------------cCCc--cchhhhhhcch
Confidence 35789999999999999999999999999999999999987754453 7777 59999999988
Q ss_pred HHHHHHHHHHHHHhccccCCCCCCCCCCCCCccChhhhhhcccCCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHH
Q 011505 311 LGEIVRRVLLRMAQEAAFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELCNIV 390 (484)
Q Consensus 311 Lgei~R~il~~~~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~i~~~V 390 (484)
|-+..+. .+ ...+ ..++++. ++..++.++.+
T Consensus 64 l~~~~~~------------------~~---~~~~-----------------~~~l~~~-----------~~~gd~~a~~i 94 (170)
T d2aa4a2 64 IAAAAQG------------------EL---AGAD-----------------AKTIFTR-----------AGQGDEQAQQL 94 (170)
T ss_dssp HHHTCCG------------------GG---TTCC-----------------HHHHHHH-----------HHTTCHHHHHH
T ss_pred HHHHHHh------------------hc---cCCC-----------------HHHHHHH-----------HHcCCchhHHH
Confidence 8432110 00 0011 1223332 44455888899
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCcCCCCCcceEEEEeceeeccchhHHHHHHHHHHHHhcccCCccEEEEE---cCChhH
Q 011505 391 ATRGARLAAAGILGVLKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVIEH---SNDGSG 467 (484)
Q Consensus 391 ~~RaA~l~Aa~iaaii~~~~~~~~~~~~~~~~~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~~~~~v~i~~---~~Dgs~ 467 (484)
++++++.+|.+|++++..++| ..|.++|++.. .+.|.+.+++.+...... ..+.|+. .+|++.
T Consensus 95 ~~~~~~~la~~l~~l~~~ldP----------~~IvlgG~i~~-~~~~~~~i~~~~~~~~~~---~~~~I~~s~l~~~a~~ 160 (170)
T d2aa4a2 95 IHRSARTLARLIADIKATTDC----------QCVVVGGSVGL-AEGYLALVETYLAQEPAA---FHVDLLAAHYRHDAGL 160 (170)
T ss_dssp HHHHHHHHHHHHHHHHHHHCC----------SEEEEEHHHHT-STTHHHHHHHHHTTSCGG---GCCEEEECSCSSCHHH
T ss_pred HHHHHHHHHHHHHhhhheECC----------CEEEEeChhhh-hhhHHHHHHHHHHhccCC---CCCeEEecCCCCcHHH
Confidence 999999999999999999999 67889999854 667888888877654222 2455664 689999
Q ss_pred HHHHHHHH
Q 011505 468 IGAALLAA 475 (484)
Q Consensus 468 iGAAl~Aa 475 (484)
+|||++|.
T Consensus 161 ~GAA~lA~ 168 (170)
T d2aa4a2 161 LGAALLAQ 168 (170)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHC
Confidence 99999983
|
| >d2ap1a2 c.55.1.10 (A:1-117) Putative regulator protein YcfX {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: ROK domain: Putative regulator protein YcfX species: Salmonella typhimurium [TaxId: 90371]
Probab=99.43 E-value=3.5e-13 Score=113.67 Aligned_cols=107 Identities=21% Similarity=0.280 Sum_probs=87.1
Q ss_pred EEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCceeeeeee
Q 011505 97 YYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGFTF 176 (484)
Q Consensus 97 ~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~lGftF 176 (484)
|||||+|||++|++++++.|+ ++... +++.|. ...+++++.|.+.+.++..+.+ ....+|+++
T Consensus 2 yiGiDiGgT~i~~~l~d~~g~---i~~~~--~~~t~~----~~~~~~~~~i~~~i~~~~~~~~--------~~~~igi~~ 64 (117)
T d2ap1a2 2 YYGFDIGGTKIALGVFDSTRR---LQWEK--RVPTPH----TSYSAFLDAVCELVEEADQRFG--------VKGSVGIGI 64 (117)
T ss_dssp EEEEEECSSEEEEEEEETTCC---EEEEE--EEECCC----SCHHHHHHHHHHHHHHHHHHHT--------SCCEEEEEE
T ss_pred EEEEEECcceEEEEEEeCCCC---EEEEE--EEeecc----cCHHHHHHHHHHHHHHHHhhcC--------cceeEEEec
Confidence 899999999999999999885 66432 244332 2467788888888888877653 246799999
Q ss_pred eeeeeeeecCceEE--------ECccHHHHHHHHHHhcCCCceEEEEEechHHHHhccccc
Q 011505 177 SFPVMQTSINTGTL--------VGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRYT 229 (484)
Q Consensus 177 SfPv~q~~~~~G~l--------~G~dv~~~L~~al~r~gl~v~v~alvNDtvatlla~~y~ 229 (484)
+.|++ .++|++ .|.++.+.|++.| ++|| .+.||+++..++++|.
T Consensus 65 pG~vd---~~~g~i~~~~~~~w~~~~l~~~l~~~~---~~pv---~l~NDan~aalaE~w~ 116 (117)
T d2ap1a2 65 PGMPE---TEDGTLYAANVPAASGKPLRADLSARL---DRDV---RLDNDANCFALSEAWD 116 (117)
T ss_dssp SSBSC---CTTSCCBCTTCTTTTTSCHHHHHHHHH---TSCE---EEEEHHHHHHHHHHTS
T ss_pred CCccc---cccceeeccCccccCCCcHHHHHHHHh---CCCE---EEEeHHHhhHhhcccc
Confidence 99998 677766 7899999999999 9995 6999999999999885
|
| >d2hoea2 c.55.1.10 (A:200-368) N-acetylglucosamine kinase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: ROK domain: N-acetylglucosamine kinase species: Thermotoga maritima [TaxId: 2336]
Probab=99.42 E-value=2.6e-13 Score=121.83 Aligned_cols=156 Identities=16% Similarity=0.145 Sum_probs=121.4
Q ss_pred CCcEEEEEEccCcceEEEcccccccCcCCCCCCCCcEEEeCCCCCCCCCCCCCchhhhhhhccCCCCCcceeeecccccc
Q 011505 231 KDVVAAVILGTGSNAAYVERAQAIPKWHGVPSKSGEMVINMEWGDFRSSHLSLSEYDNALDAESLNPGEQIFEKMISGMY 310 (484)
Q Consensus 231 ~~~~iglIlGTG~Na~yie~~~~i~k~~~~~~~~g~miIN~EwG~f~~~~lp~T~~D~~lD~~s~npg~q~fEkm~SG~Y 310 (484)
.++++.+.+|||++++++.+++.+.+.++.+++.|||.|- ++|.+ .|+|..+|+.+
T Consensus 1 ~~~~~~i~~g~GiG~gii~~g~l~~G~~g~aGEiGh~~v~-~~~~~-----------------------~c~~~~~s~~~ 56 (169)
T d2hoea2 1 DDSFAWILTGKGIGAGIIIDGELYRGENGYAGEIGYTRVF-NGNEY-----------------------VFLEDVCNENV 56 (169)
T ss_dssp CSCEEEEEESSSCEEEEEETTEECCCSSSCCCCGGGCEEE-CSSSE-----------------------EEHHHHHCHHH
T ss_pred CCeEEEEEECCceEEEEEECCEEEeCCCCCCccccccccc-CCCCc-----------------------ccccccchHHH
Confidence 3678999999999999999999999999999999999983 32322 58999999998
Q ss_pred HHHHHHHHHHHHHhccccCCCCCCCCCCCCCccChhhhhhcccCCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHH
Q 011505 311 LGEIVRRVLLRMAQEAAFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELCNIV 390 (484)
Q Consensus 311 Lgei~R~il~~~~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~i~~~V 390 (484)
+.+... .. + . + .+. +.++..+..++.+
T Consensus 57 l~~~~~---~~----~------~-~-----------~l~----------------------------~~~~~gd~~a~~~ 83 (169)
T d2hoea2 57 VLKHVL---SM----G------F-S-----------SLA----------------------------EARDSGDVRVKEY 83 (169)
T ss_dssp HHHHHH---HH----C------C-C------------TT----------------------------HHHHTTCHHHHHH
T ss_pred HHhhhc---cc----c------h-H-----------HHH----------------------------HHHHcCCHHHHHH
Confidence 854321 11 0 0 0 000 1133344677889
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCcCCCCCcceEEEEeceeeccchhHHHHHHHHHHHHhcccCCccEEEEE---cCChhH
Q 011505 391 ATRGARLAAAGILGVLKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVIEH---SNDGSG 467 (484)
Q Consensus 391 ~~RaA~l~Aa~iaaii~~~~~~~~~~~~~~~~~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~~~~~v~i~~---~~Dgs~ 467 (484)
++++++.+|.+|++++..++| ..|.++|++.+..+.|.+.+++.+++...+.. .+.|+. .+|++.
T Consensus 84 ~~~~~~~la~~l~n~~~~~dP----------e~IvlgG~~~~~~~~~~~~i~~~~~~~~~~~~--~~~i~~s~~~~~a~~ 151 (169)
T d2hoea2 84 FDDIARYFSIGLLNLIHLFGI----------SKIVIGGFFKELGENFLKKIKIEVETHLLYKH--SVDMSFSKVQEPVIA 151 (169)
T ss_dssp HHHHHHHHHHHHHHHHHHHCC----------CEEEEEEGGGGGHHHHHHHHHHHHHHHCSSSC--CCEEEECCCCSCHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCC----------CEEEEeChHHhchHHHHHHHHHHHHHhcCCCC--CCEEEECCCCCCHHH
Confidence 999999999999999999999 68999999998899999999999998765432 344554 689999
Q ss_pred HHHHHHHH
Q 011505 468 IGAALLAA 475 (484)
Q Consensus 468 iGAAl~Aa 475 (484)
+|||.++.
T Consensus 152 ~GAa~~~~ 159 (169)
T d2hoea2 152 FGAAVHAL 159 (169)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999864
|
| >d2hoea3 c.55.1.10 (A:72-199) N-acetylglucosamine kinase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: ROK domain: N-acetylglucosamine kinase species: Thermotoga maritima [TaxId: 2336]
Probab=99.37 E-value=2.2e-12 Score=110.24 Aligned_cols=118 Identities=9% Similarity=0.157 Sum_probs=95.6
Q ss_pred ceeeEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCceee
Q 011505 93 EKGTYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQREL 172 (484)
Q Consensus 93 E~G~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~l 172 (484)
+.+++||||+|||++|++++++.|+ ++.+. .++.|.. .+.+++++.|++.+.++++..+.. ..+...+
T Consensus 2 ~~~~~igidig~~~i~~~l~d~~G~---il~~~--~~~~~~~---~~~~~~~~~i~~~i~~~~~~~~~~----~~~i~gi 69 (128)
T d2hoea3 2 NCAYVLGIEVTRDEIAACLIDASMN---ILAHE--AHPLPSQ---SDREETLNVMYRIIDRAKDMMEKL----GSKLSAL 69 (128)
T ss_dssp GGCEEEEEEECSSEEEEEEEETTCC---EEEEE--EEECCSS---CCHHHHHHHHHHHHHHHHHHHHHT----TCCCCEE
T ss_pred CcEEEEEEEECCCEEEEEEEcCCCC---EEEEE--EEecccC---CCHHHHHHHHHHHHHHHHHHhccc----cCceEEE
Confidence 4568999999999999999999986 66442 3455543 356889999999999998876543 2456789
Q ss_pred eeeeeeeeeeeecCceEE--------ECccHHHHHHHHHHhcCCCceEEEEEechHHHHhcccccCC
Q 011505 173 GFTFSFPVMQTSINTGTL--------VGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRYTNK 231 (484)
Q Consensus 173 GftFSfPv~q~~~~~G~l--------~G~dv~~~L~~al~r~gl~v~v~alvNDtvatlla~~y~~~ 231 (484)
|++++.|++ .++|++ .+.|+.+.|++.+ ++|| .+.||+++..+++.|.+.
T Consensus 70 gi~~pG~vd---~~~g~i~~~~~l~w~~~~l~~~l~~~~---~~pv---~i~NDa~~~alaE~~fG~ 127 (128)
T d2hoea3 70 TVAAPGPID---TERGIIIDPRNFPLSQIPLANLLKEKY---GIEV---WVENDADMGAVGEKWYTK 127 (128)
T ss_dssp EEEESSCEE---TTTTEECCCSSCTTBTSCHHHHHHHHH---CSEE---EEEEHHHHHHHHHHHHTT
T ss_pred ecceeeeEc---CCCCEEEeeccccccCCchHHHHHHHc---CCCE---EEEeHHHHHHHHHHHhcC
Confidence 999999998 677776 8889999999999 8884 699999999999998653
|
| >d1z6ra2 c.55.1.10 (A:82-210) Mlc protein {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: ROK domain: Mlc protein species: Escherichia coli [TaxId: 562]
Probab=99.30 E-value=1.2e-11 Score=105.61 Aligned_cols=117 Identities=15% Similarity=0.201 Sum_probs=95.1
Q ss_pred CceeeEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCcee
Q 011505 92 DEKGTYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRE 171 (484)
Q Consensus 92 ~E~G~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~ 171 (484)
+|..+||+||+|+|+++++++++.|+ ++.+. .+++|. .+.+++.+.|++.|.+|+++++... .+...
T Consensus 1 te~~~~l~i~i~~~~i~~~l~Dl~G~---~l~~~--~~~~~~----~~~~~~~~~l~~~i~~~l~~~~~~~----~~i~g 67 (129)
T d1z6ra2 1 TEAWHYLSLRISRGEIFLALRDLSSK---LVVEE--SQELAL----KDDLPLLDRIISHIDQFFIRHQKKL----ERLTS 67 (129)
T ss_dssp CTTCEEEEEEEETTEEEEEEEETTCC---EEEEE--EEECCS----SCSSCHHHHHHHHHHHHHHHTGGGC----CCEEE
T ss_pred CCceEEEEEEECCCEEEEEEEcCCCC---EEEEE--Eeeccc----cchhHHHHHHHHHHHHHHHhcCccc----cccee
Confidence 47789999999999999999999996 66442 355543 2456789999999999999876432 45688
Q ss_pred eeeeeeeeeeeeecCceEE---------ECccHHHHHHHHHHhcCCCceEEEEEechHHHHhcccccC
Q 011505 172 LGFTFSFPVMQTSINTGTL---------VGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRYTN 230 (484)
Q Consensus 172 lGftFSfPv~q~~~~~G~l---------~G~dv~~~L~~al~r~gl~v~v~alvNDtvatlla~~y~~ 230 (484)
+|++++.|++ .++|.+ .+.|+.+.|++.+ ++|| .+.||+++.++++.|.+
T Consensus 68 Igi~~pG~v~---~~~~~~~~~~~~~~w~~~~l~~~l~~~~---~~pV---~~~NDa~a~alaE~~~G 126 (129)
T d1z6ra2 68 IAITLPGIID---TENGIVHRMPFYEDVKEMPLGEALEQHT---GVPV---YIQHDISAWTMAEALFG 126 (129)
T ss_dssp EEEEESSEEE---TTTTEEEECTTCTTCSSBCHHHHHHHHH---SSCE---EEEEHHHHHHHHHHHHS
T ss_pred EEEeeeeeee---ecccceeccCcchhccCcchHHHHHHhc---CCCE---EEEehHHHHHHHHHhhC
Confidence 8999999998 556665 7789999999999 8994 69999999999998764
|
| >d2gupa1 c.55.1.10 (A:1-114) Hypothetical protein SP2142 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: ROK domain: Hypothetical protein SP2142 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.28 E-value=4.9e-12 Score=106.52 Aligned_cols=104 Identities=22% Similarity=0.282 Sum_probs=76.3
Q ss_pred eEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCceeeeee
Q 011505 96 TYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGFT 175 (484)
Q Consensus 96 ~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~lGft 175 (484)
++++||+|||++|+++++..|+ ++.+ .++|+.- + ++.+.+.|.++++++ +...+|++
T Consensus 2 ~i~~iDiGgT~i~~~l~d~~g~---i~~~----~~~~t~~---~----~~~~~~~i~~~~~~~---------~i~gIGi~ 58 (114)
T d2gupa1 2 TIATIDIGGTGIKFASLTPDGK---ILDK----TSISTPE---N----LEDLLAWLDQRLSEQ---------DYSGIAMS 58 (114)
T ss_dssp CEEEEEEETTEEEEEEECTTCC---EEEE----EEECCCS---S----HHHHHHHHHHHHTTS---------CCSEEEEE
T ss_pred eEEEEEeCcccEEEEEEcCCCC---EEEE----EEEcccc---c----HHHHHHHHHHHhhhc---------ccceEEEe
Confidence 4789999999999999998875 5543 2344321 2 334444555555432 35679999
Q ss_pred eeeeeeeeecCceEE---------ECccHHHHHHHHHHhcCCCceEEEEEechHHHHhcccccCCC
Q 011505 176 FSFPVMQTSINTGTL---------VGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRYTNKD 232 (484)
Q Consensus 176 FSfPv~q~~~~~G~l---------~G~dv~~~L~~al~r~gl~v~v~alvNDtvatlla~~y~~~~ 232 (484)
++.|++ ..+|++ .+.++.+.|+ .| ++|| .+.||++++.+++.|.+|+
T Consensus 59 ~pG~vd---~~~g~i~~~~~l~~~~~~~l~~~l~-~~---~~pV---~veNDanaaalgE~~~~p~ 114 (114)
T d2gupa1 59 VPGAVN---QETGVIDGFSAVPYIHGFSWYEALS-SY---QLPV---HLENDANCVGLSELLAHPE 114 (114)
T ss_dssp ESSEEC---TTTCBEESCCSSGGGSSSBHHHHTG-GG---CCCE---EEEEHHHHHHHHHHHHCTT
T ss_pred cccccc---CCccEEEcccccCcccCCcHHHHHH-hC---CCCE---EEEhHHHHHHHHHHHHCcC
Confidence 999998 677766 7778888875 46 8995 6999999999999888764
|
| >d2aa4a1 c.55.1.10 (A:1-119) N-acetylmannosamine kinase NanK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: ROK domain: N-acetylmannosamine kinase NanK species: Escherichia coli [TaxId: 562]
Probab=99.27 E-value=7.4e-12 Score=105.86 Aligned_cols=103 Identities=18% Similarity=0.245 Sum_probs=77.8
Q ss_pred eEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCceeeeee
Q 011505 96 TYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGFT 175 (484)
Q Consensus 96 ~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~lGft 175 (484)
++|+||+|||++|++++++.|+ ++.+. +++.|.. ...+.+++.|.+.+.++. .+...+|++
T Consensus 2 ~~lgiDiGgT~i~~~l~d~~G~---i~~~~--~~~~~~~---~~~~~~~~~i~~~i~~~~-----------~~~~~igI~ 62 (119)
T d2aa4a1 2 TTLAIDIGGTKLAAALIGADGQ---IRDRR--ELPTPAS---QTPEALRDALSALVSPLQ-----------AHAQRVAIA 62 (119)
T ss_dssp CEEEEEECSSEEEEEEECTTCC---EEEEE--EEECCSS---CCHHHHHHHHHHHHTTTG-----------GGCSEEEEE
T ss_pred eEEEEEeCcCEEEEEEEcCCCC---EEEeE--EEecccc---CcHHHHHHHHHHHHHHhh-----------ccCceEEEE
Confidence 4799999999999999999885 66432 2444432 345667666665554431 124679999
Q ss_pred eeeeeeeeecCceEE---------ECccHHHHHHHHHHhcCCCceEEEEEechHHHHhcc
Q 011505 176 FSFPVMQTSINTGTL---------VGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGG 226 (484)
Q Consensus 176 FSfPv~q~~~~~G~l---------~G~dv~~~L~~al~r~gl~v~v~alvNDtvatlla~ 226 (484)
++.|++ ..++.+ .+.|+.+.|++.| ++|| .+.||+++..+++
T Consensus 63 ~pG~v~---~~~~~~~~~~~l~~w~~~~l~~~l~~~~---~~pv---~i~NDanaaalgE 113 (119)
T d2aa4a1 63 STGIIR---DGSLLALNPHNLGGLLHFPLVKTLEQLT---NLPT---IAINDAQAAAWAE 113 (119)
T ss_dssp ESSEEE---TTEEECSSGGGGGGGTTCCHHHHHHHHH---CSCE---EEEEHHHHHHHHH
T ss_pred eeeeEc---CCCcEEEccCccccccCCCHHHHHHHHh---CCCE---EEEehHHHHHHHH
Confidence 999998 555655 7889999999999 9995 6999999999998
|
| >d1woqa1 c.55.1.10 (A:11-139) Inorganic polyphosphate/ATP-glucomannokinase PPGMK {Arthrobacter sp. KM [TaxId: 184230]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: ROK domain: Inorganic polyphosphate/ATP-glucomannokinase PPGMK species: Arthrobacter sp. KM [TaxId: 184230]
Probab=99.27 E-value=1.4e-11 Score=105.14 Aligned_cols=115 Identities=17% Similarity=0.246 Sum_probs=85.4
Q ss_pred eEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCceeeeee
Q 011505 96 TYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGFT 175 (484)
Q Consensus 96 ~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~lGft 175 (484)
.+|+||+|||++|++++++.++ .++.+ ++.+|+.. ..+.+.+++.|++.+.++.+..... .....+|+.
T Consensus 3 ~vlGiDiGgT~i~~~l~d~~~g--~i~~~---~~~~~t~~-~~~~~~~~~~i~~~~~~l~~~~~~~-----~~~~gIGi~ 71 (129)
T d1woqa1 3 PLIGIDIGGTGIKGGIVDLKKG--KLLGE---RFRVPTPQ-PATPESVAEAVALVVAELSARPEAP-----AAGSPVGVT 71 (129)
T ss_dssp CEEEEEECSSEEEEEEEETTTT--EEEEE---EEEEECCS-SCCHHHHHHHHHHHHHHHHTSTTCC-----CTTCCEEEE
T ss_pred CEEEEEECcceEEEEEEECCCC--EEEEE---Eeeccccc-CCCHHHHHHHHHHHHHHHHhccccc-----cccceeeec
Confidence 5899999999999999998653 24432 24455433 3457889999999888876554321 235678888
Q ss_pred eeeeeeeeecCceEE--------ECccHHHHHHHHHHhcCCCceEEEEEechHHHHhcccccC
Q 011505 176 FSFPVMQTSINTGTL--------VGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRYTN 230 (484)
Q Consensus 176 FSfPv~q~~~~~G~l--------~G~dv~~~L~~al~r~gl~v~v~alvNDtvatlla~~y~~ 230 (484)
++.|++. +.+.. .+.|+.+.|++.| ++|| .+.||+++..++++|.+
T Consensus 72 ~pG~vd~---~~~~~~~~~~~~w~~~~l~~~l~~~~---~~pv---~i~NDan~aalgE~~~G 125 (129)
T d1woqa1 72 FPGIIQH---GVVHSAANVDKSWLNTDIDALLTARL---GRPV---EVINDADAAGLAEARYG 125 (129)
T ss_dssp ESSCEET---TEECCCTTSCGGGTTCBHHHHHHHHH---TSCE---EEEEHHHHHHHHHHHHS
T ss_pred ceeeEec---CeEEEecccCCCcccccchhhHHHhc---CCcE---EEEEhHHHHHHHHHhhc
Confidence 8888872 22222 7889999999999 9995 69999999999998764
|
| >d1z05a3 c.55.1.10 (A:81-208) Transcriptional regulator VC2007 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: ROK domain: Transcriptional regulator VC2007 species: Vibrio cholerae [TaxId: 666]
Probab=99.26 E-value=2.1e-11 Score=103.73 Aligned_cols=113 Identities=18% Similarity=0.284 Sum_probs=91.8
Q ss_pred eEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCceeeeee
Q 011505 96 TYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGFT 175 (484)
Q Consensus 96 ~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~lGft 175 (484)
.||+||+|+|+++++++++.|+ ++.+. +++.|.. +.+++.+.|.+.|.+++++.+... .+...+|++
T Consensus 5 ~~lgi~ig~~~i~~~l~d~~G~---il~~~--~~~~~~~----~~~~~~~~i~~~i~~~~~~~~~~~----~~i~gIgi~ 71 (128)
T d1z05a3 5 QFLSMRLGRGYLTIALHELGGE---VLIDT--KIDIHEI----DQDDVLARLLFEIEEFFQTYAAQL----DRVTSIAIT 71 (128)
T ss_dssp EEEEEEEETTEEEEEEEETTSC---EEEEE--EEECCCC----BHHHHHHHHHHHHHHHHHHTTTTC----CEEEEEEEE
T ss_pred EEEEEEECCCEEEEEEEcCCCC---EEEEE--EeccccC----CHHHHHHHHHHHHHHHHHHccccc----ccceEEEee
Confidence 6999999999999999999986 66432 3555432 356889999999999999876432 346789999
Q ss_pred eeeeeeeeecCceEE--------ECccHHHHHHHHHHhcCCCceEEEEEechHHHHhcccccC
Q 011505 176 FSFPVMQTSINTGTL--------VGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRYTN 230 (484)
Q Consensus 176 FSfPv~q~~~~~G~l--------~G~dv~~~L~~al~r~gl~v~v~alvNDtvatlla~~y~~ 230 (484)
++.|++ .+++++ .+.|+.+.|++.+ ++|| .+.||+++.+++++|.+
T Consensus 72 ~pG~vd---~~~~~~~~~~~~~~~~~~l~~~l~~~~---~~PV---~l~NDana~a~aE~~~G 125 (128)
T d1z05a3 72 LPGLVN---SEQGIVLQMPHYNVKNLALGPEIYKAT---GLPV---FVANDTRAWALAEKLFG 125 (128)
T ss_dssp ESSEEE---TTTTEEEECSSSBCSSBCHHHHHHHHH---CSCE---EEEEHHHHHHHHHHHHS
T ss_pred eeeeee---ccceeeeccccCCCCCcchHHHHHHhc---CCCE---EEEehHHHHHHHHHhhC
Confidence 999998 556665 7889999999999 9995 68999999999998764
|
| >d1xc3a2 c.55.1.10 (A:119-294) Putative fructokinase YhdR {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: ROK domain: Putative fructokinase YhdR species: Bacillus subtilis [TaxId: 1423]
Probab=99.12 E-value=1.1e-10 Score=105.02 Aligned_cols=156 Identities=17% Similarity=0.168 Sum_probs=106.9
Q ss_pred CCcEEEEEEccCcceEEEcccccccCcCCCCCCCCcEEEeCCCCCCCCCCCCCchhhhhhhccCCCCCcceeeecccccc
Q 011505 231 KDVVAAVILGTGSNAAYVERAQAIPKWHGVPSKSGEMVINMEWGDFRSSHLSLSEYDNALDAESLNPGEQIFEKMISGMY 310 (484)
Q Consensus 231 ~~~~iglIlGTG~Na~yie~~~~i~k~~~~~~~~g~miIN~EwG~f~~~~lp~T~~D~~lD~~s~npg~q~fEkm~SG~Y 310 (484)
.++++.+++|||++++++.+++.+.+.+ ++|.|||.|+.....+.. ..|++.+ .|+|.++|+..
T Consensus 2 ~~~~~~l~lGtGiG~gii~ng~l~~G~~--aGEiGh~~v~~~~~~~~~-------------~~~~~~~-~~~e~~~s~~~ 65 (176)
T d1xc3a2 2 LDSCLYITIGTGIGAGAIVEGRLLQGLS--HPEMGHIYIRRHPDDVYQ-------------GKCPYHG-DCFEGLASGPA 65 (176)
T ss_dssp CSCEEEEEESSSEEEEEEETTEECCSSS--CCCGGGCBCCCCTTCCCC-------------CSBTTTB-SBHHHHHSHHH
T ss_pred cceEEEEEEccCeEEEEEECCEEeeCCC--CCccceecccccccCccc-------------cCcCCcc-chhhhhccHHH
Confidence 4689999999999999999999998864 478999998764322210 0133322 48999999887
Q ss_pred HHHHHHHHHHHHHhccccCCCCCCCCCCCCCccChhhhhhcccCCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHH
Q 011505 311 LGEIVRRVLLRMAQEAAFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELCNIV 390 (484)
Q Consensus 311 Lgei~R~il~~~~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~i~~~V 390 (484)
|-+ + ..+ . ..++ ++ +..+
T Consensus 66 l~~---~----~~~-------~------------------~~~~--~~----------------------------~~~i 83 (176)
T d1xc3a2 66 IEA---R----WGK-------K------------------AADL--SD----------------------------IAQV 83 (176)
T ss_dssp HHH---H----HSS-------C------------------TTTT--TT----------------------------CHHH
T ss_pred HHH---H----Hhh-------c------------------chhh--HH----------------------------HHHH
Confidence 632 1 100 0 0000 00 1246
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCcCCCCCcceEEEEeceeeccchhHHHHHHHHHHHHhccc-------CCccEEEEE--
Q 011505 391 ATRGARLAAAGILGVLKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEE-------LFKNIVIEH-- 461 (484)
Q Consensus 391 ~~RaA~l~Aa~iaaii~~~~~~~~~~~~~~~~~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~-------~~~~v~i~~-- 461 (484)
++++++.+|.+|++++..++| ..|.++||+.+..+ +.+.+.+.+++++... ....+.|+.
T Consensus 84 ~~~~~~~la~~i~~~~~~~dP----------~~IviGGgi~~~~~-l~~~i~~~l~~~~~~~~~~~~~~~~~~~~I~~s~ 152 (176)
T d1xc3a2 84 WELEGYYIAQALAQYILILAP----------KKIILGGGVMQQKQ-VFSYIYQYVPKIMNSYLDFSELSDDISDYIVPPR 152 (176)
T ss_dssp HHHHHHHHHHHHHHHHHHTCC----------SCEEEESGGGGSTH-HHHHHHHHHHHHHTTSSCCGGGTTTGGGTEECCT
T ss_pred HHHHHHHHHHHHHHHHHHHCC----------CEEEEcChhhccHh-HHHHHHHHHHHHHHHhhccccccccCCCeEEeCC
Confidence 788899999999999999999 68999999987654 5577777777764321 111233443
Q ss_pred -cCChhHHHHHHHHH
Q 011505 462 -SNDGSGIGAALLAA 475 (484)
Q Consensus 462 -~~Dgs~iGAAl~Aa 475 (484)
++|++.+|||.+|.
T Consensus 153 lg~~a~l~GAa~la~ 167 (176)
T d1xc3a2 153 LGSNAGIIGTLVLAH 167 (176)
T ss_dssp TGGGHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHH
Confidence 78999999999884
|
| >d1xc3a1 c.55.1.10 (A:1-118) Putative fructokinase YhdR {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: ROK domain: Putative fructokinase YhdR species: Bacillus subtilis [TaxId: 1423]
Probab=99.09 E-value=1.6e-10 Score=97.33 Aligned_cols=104 Identities=17% Similarity=0.273 Sum_probs=76.3
Q ss_pred EEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCceeeeeee
Q 011505 97 YYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGFTF 176 (484)
Q Consensus 97 ~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~lGftF 176 (484)
|++||+|||++|++++++.|+ ++.+ ..+|+. ..+++++.|. +++++. +...+|+.+
T Consensus 2 ~~giDiGgT~i~~~l~d~~g~---i~~~----~~~~t~----~~~~~~~~i~----~~~~~~---------~~~~igi~~ 57 (118)
T d1xc3a1 2 LGGIEAGGTKFVCAVGREDGT---IIDR----IEFPTK----MPDETIEKVI----QYFSQF---------SLQAIGIGS 57 (118)
T ss_dssp EEEEEECSSEEEEEEECTTSC---EEEE----EEEECC----CHHHHHHHHH----HHHTTS---------CCSEEEEEE
T ss_pred EEEEEeccCEEEEEEEcCCCC---EEEE----EEecCC----CHHHHHHHHH----HHHhhc---------cceecceeE
Confidence 789999999999999999886 6543 445543 2345555444 444332 246799999
Q ss_pred eeeeeeee--cCceEE--------ECccHHHHHHHHHHhcCCCceEEEEEechHHHHhcccccC
Q 011505 177 SFPVMQTS--INTGTL--------VGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGGRYTN 230 (484)
Q Consensus 177 SfPv~q~~--~~~G~l--------~G~dv~~~L~~al~r~gl~v~v~alvNDtvatlla~~y~~ 230 (484)
+.|++... ...|.+ .|.|+.+.|++.+ ++|| .+.||+++..++++|.+
T Consensus 58 ~G~v~~~~~~~~~g~v~~~~~~~w~~~~l~~~l~~~~---~~pv---~i~NDana~algE~~~G 115 (118)
T d1xc3a1 58 FGPVDNDKTSQTYGTITATPKAGWRHYPFLQTVKNEM---KIPV---GFSTDVNAAALGEFLFG 115 (118)
T ss_dssp CSSBCCCTTSTTTTSBCCCSSTTTBTCCHHHHHHHHH---CSCE---EEEEHHHHHHHHHHHHS
T ss_pred EeeeecCCCccceeEEEcCCcccccCcCHHHHHHHHH---CCCE---EEeehHHHHHHHHHhhC
Confidence 99987432 223333 7899999999999 9995 69999999999998764
|
| >d2ewsa1 c.55.1.14 (A:1-267) Type II pantothenate kinase, CoaW {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Fumble-like domain: Type II pantothenate kinase, CoaW species: Staphylococcus aureus [TaxId: 1280]
Probab=99.00 E-value=7.1e-11 Score=110.92 Aligned_cols=73 Identities=15% Similarity=0.053 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCcceEEEEeceeeccchhHHHHHHHHHHHHhcccCCccEEEEE---
Q 011505 385 ELCNIVATRGARLAAAGILGVLKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVIEH--- 461 (484)
Q Consensus 385 ~i~~~V~~RaA~l~Aa~iaaii~~~~~~~~~~~~~~~~~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~~~~~v~i~~--- 461 (484)
.++..+++..++.++..+..+...+++ ..|.+.||+....|.+++.+++++++. .+++.+
T Consensus 191 ~~a~~~~~~~~~~l~~~~~~~~~~~~~----------~~Iv~~GG~~~~~~~l~~~i~~~~~~~-------~~~i~~~~~ 253 (267)
T d2ewsa1 191 NKLAAVIGVVGEVVTTMAITVAREFKT----------ENIVYIGSSFHNNALLRKVVEDYTVLR-------GCKPYYVEN 253 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTC----------CEEEEESGGGTTCHHHHHHHHHHHHHT-------TCEEEECTT
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhcCC----------CCEEEECChhhcCHHHHHHHHHHHHhC-------CCEEEECCC
Confidence 555567778888888888889888887 468888888889999999999988742 233333
Q ss_pred cCChhHHHHHHHH
Q 011505 462 SNDGSGIGAALLA 474 (484)
Q Consensus 462 ~~Dgs~iGAAl~A 474 (484)
.++++.+|||+++
T Consensus 254 ~~~aGaiGA~~L~ 266 (267)
T d2ewsa1 254 GAFSGAIGALYLE 266 (267)
T ss_dssp GGGHHHHHHHHTC
T ss_pred ccHHHHHHHHHhc
Confidence 6678889988764
|
| >d1woqa2 c.55.1.10 (A:140-263) Inorganic polyphosphate/ATP-glucomannokinase PPGMK {Arthrobacter sp. KM [TaxId: 184230]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: ROK domain: Inorganic polyphosphate/ATP-glucomannokinase PPGMK species: Arthrobacter sp. KM [TaxId: 184230]
Probab=98.91 E-value=3.1e-10 Score=96.83 Aligned_cols=117 Identities=21% Similarity=0.220 Sum_probs=89.0
Q ss_pred CcEEEEEEccCcceEEEcccccccCcCCCCCCCCcEEEeCCCCCCCCCCCCCchhhhhhhccCCCCCcceeeeccccccH
Q 011505 232 DVVAAVILGTGSNAAYVERAQAIPKWHGVPSKSGEMVINMEWGDFRSSHLSLSEYDNALDAESLNPGEQIFEKMISGMYL 311 (484)
Q Consensus 232 ~~~iglIlGTG~Na~yie~~~~i~k~~~~~~~~g~miIN~EwG~f~~~~lp~T~~D~~lD~~s~npg~q~fEkm~SG~YL 311 (484)
.+++.+++|||++++++.+++.+++ +|.|||.++ + +++|.++|+..+
T Consensus 3 g~v~~ltlGTGiG~gii~nG~l~~g-----gEiGh~~~~--------------------------~--~~~e~~~s~~~~ 49 (124)
T d1woqa2 3 GTVLVITLGTGIGSAFIFDGKLVPN-----AELGHLEID--------------------------G--HDAETKASAVAR 49 (124)
T ss_dssp SEEEEEEESSSEEEEEEETTEEETT-----CCGGGCEET--------------------------T--EEHHHHHSHHHH
T ss_pred cEEEEEEEcCCeeEEEEECCEEccC-----Ccccccccc--------------------------C--CChhhhhccchH
Confidence 4789999999999999999888764 577777663 1 488888887654
Q ss_pred HHHHHHHHHHHHhccccCCCCCCCCCCCCCccChhhhhhcccCCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHH
Q 011505 312 GEIVRRVLLRMAQEAAFFGDTVPPKLEVPFALRTPDMSAMHHDTSSDLKVVETKLKDILEISSTSLSMRKTIVELCNIVA 391 (484)
Q Consensus 312 gei~R~il~~~~~~~~lF~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~il~~~~~~~~~~~~d~~~~~~i~~~V~ 391 (484)
-+ +. . -+
T Consensus 50 ~~-----------~~------------------------------------------------~--------------~~ 56 (124)
T d1woqa2 50 ER-----------DG------------------------------------------------L--------------SW 56 (124)
T ss_dssp HH-----------TT------------------------------------------------C--------------CH
T ss_pred HH-----------HH------------------------------------------------H--------------HH
Confidence 11 00 0 03
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCcCCCCCcceEEEEeceeeccchhHHHHHHHHHHHHhcccCCccEEEE---EcCChhHH
Q 011505 392 TRGARLAAAGILGVLKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVIE---HSNDGSGI 468 (484)
Q Consensus 392 ~RaA~l~Aa~iaaii~~~~~~~~~~~~~~~~~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~~~~~v~i~---~~~Dgs~i 468 (484)
+++++.+|.+|++++..++| .+|.++||+.+..+.|.+.+++ ++.|+ +.+|++.+
T Consensus 57 ~~~~~~la~~l~~~~~~~dP----------e~IVlGGgi~~~~~~~~~~l~~------------~~~i~~a~l~~~Agli 114 (124)
T d1woqa2 57 DEYSVLLQRYFSHVEFLFSP----------ELFIVGGGISKRADEYLPNLRL------------RTPIVPAVLRNEAGIV 114 (124)
T ss_dssp HHHHHHHHHHHHHHHHHHCC----------SEEEEESGGGGGGGGTGGGCCC------------SSCEEECSCSTTHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCC----------CEEEEcchHhhChHHHhhhhhc------------cCeEEecCcCCcHHHH
Confidence 45678899999999999999 6999999999998887655432 34454 47999999
Q ss_pred HHHHHHHH
Q 011505 469 GAALLAAS 476 (484)
Q Consensus 469 GAAl~Aa~ 476 (484)
|||+.|+.
T Consensus 115 GAAl~a~~ 122 (124)
T d1woqa2 115 GAAIEIAL 122 (124)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99998864
|
| >d1huxa_ c.55.1.5 (A:) Hydroxyglutaryl-CoA dehydratase component A {Acidaminococcus fermentans [TaxId: 905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: BadF/BadG/BcrA/BcrD-like domain: Hydroxyglutaryl-CoA dehydratase component A species: Acidaminococcus fermentans [TaxId: 905]
Probab=98.87 E-value=9e-09 Score=96.15 Aligned_cols=46 Identities=26% Similarity=0.285 Sum_probs=33.5
Q ss_pred eEEEEeceeeccchhHHHHHHHHHHHHhcccCCccEE-EEEcCChhHHHHHHHHHH
Q 011505 422 TVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIV-IEHSNDGSGIGAALLAAS 476 (484)
Q Consensus 422 ~~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~~~~~v~-i~~~~Dgs~iGAAl~Aa~ 476 (484)
..|.+.||++ +.|.|++.+++.++ .++. -.+.++++.+|||++|+=
T Consensus 209 ~~Iv~gGGv~-~~~~~~~~l~~~l~--------~~i~~~~~~~~agaiGAA~lA~~ 255 (259)
T d1huxa_ 209 KDVVMTGGVA-QNYGVRGALEEGLG--------VEIKTSPLAQYNGALGAALYAYK 255 (259)
T ss_dssp SSEEEESGGG-GCHHHHHHHHHHHC--------SCEECCGGGGGHHHHHHHHHHHH
T ss_pred CcEEEEcccc-ccHHHHHHHHHHHC--------CCEEcCCCccHHHHHHHHHHHHH
Confidence 3588899998 56888888887763 1221 224788999999999974
|
| >d2ch5a1 c.55.1.5 (A:118-344) N-acetylglucosamine kinase, NAGK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: BadF/BadG/BcrA/BcrD-like domain: N-acetylglucosamine kinase, NAGK species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.75 E-value=7.6e-08 Score=89.94 Aligned_cols=97 Identities=15% Similarity=0.174 Sum_probs=78.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCcceEEEEeceeeccchhHHHHHHHHHHHHhccc---CCcc
Q 011505 380 RKTIVELCNIVATRGARLAAAGILGVLKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEE---LFKN 456 (484)
Q Consensus 380 ~~~~~~i~~~V~~RaA~l~Aa~iaaii~~~~~~~~~~~~~~~~~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~---~~~~ 456 (484)
++..+++|..|++++++.++..+.++++++++... .......|++.||++++.+.+++.++++|.+...+. ....
T Consensus 107 A~~GD~~A~~Il~~aa~~La~~i~~~~~~l~~~~~--~~~~~~~Vvl~Ggv~~~~~~l~~~~~~~L~~~~~~~~~~~~~~ 184 (227)
T d2ch5a1 107 AQQGDPLSRYIFRKAGEMLGRHIVAVLPEIDPVLF--QGKIGLPILCVGSVWKSWELLKEGFLLALTQGREIQAQNFFSS 184 (227)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHHHHHGGGSCGGGG--CSTTCEEEEEESGGGGGHHHHHHHHHHHHHHHC---CCCSCSE
T ss_pred hhcchHHHHHHHHHHHHHHHHHHHHHHHhcCchhh--ccccCCCeEEechHhhcchHHHHHHHHHHHHhcchhhcccCCe
Confidence 67788999999999999999999999999987321 122446799999999999999999999998764332 2245
Q ss_pred EEEEEcCChhHHHHHHHHHHhc
Q 011505 457 IVIEHSNDGSGIGAALLAASHS 478 (484)
Q Consensus 457 v~i~~~~Dgs~iGAAl~Aa~~~ 478 (484)
+++...++.+.+|||++|+-..
T Consensus 185 ~~~~~~~~~p~~GAa~LA~~~~ 206 (227)
T d2ch5a1 185 FTLMKLRHSSALGGASLGARHI 206 (227)
T ss_dssp EEEEEESSCTHHHHHHHHHHTT
T ss_pred eEeecCCCccHHHHHHHHHHHc
Confidence 7778889999999999997554
|
| >d1q18a1 c.55.1.7 (A:2-111) Glucokinase Glk {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Glucokinase domain: Glucokinase Glk species: Escherichia coli [TaxId: 562]
Probab=98.69 E-value=1.3e-08 Score=84.14 Aligned_cols=103 Identities=14% Similarity=0.160 Sum_probs=64.4
Q ss_pred eeEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCceeeee
Q 011505 95 GTYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGF 174 (484)
Q Consensus 95 G~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~lGf 174 (484)
-++|++|+||||+|+++|+.++. .+... ...|+.. .+. +.+.|.+|+++.+. ....+++
T Consensus 2 ~~~L~~DIGGTn~r~alv~~~~~---~l~~~---~~~~~~~----~~~----~~~~i~~~~~~~~~-------~~~~~~i 60 (110)
T d1q18a1 2 KYALVGDVGGTNARLALCDIASG---EISQA---KTYSGLD----YPS----LEAVIRVYLEEHKV-------EVKDGCI 60 (110)
T ss_dssp CEEEEEEECSSEEEEEEEETTTC---CEEEE---EEEEGGG----CSC----HHHHHHHHHHHHTC-------CCSEEEE
T ss_pred cEEEEEEECchhEEEEEEEcCCC---eEEEE---Eeecccc----hhh----HHHHHHHHHhhccc-------ccceEEE
Confidence 47899999999999999987654 23221 1222221 122 34456666666542 2456778
Q ss_pred eeeeeeeeeecCceEE---ECccHHHHHHHHHHhcCCCceEEEEEechHHHHhcc
Q 011505 175 TFSFPVMQTSINTGTL---VGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGG 226 (484)
Q Consensus 175 tFSfPv~q~~~~~G~l---~G~dv~~~L~~al~r~gl~v~v~alvNDtvatlla~ 226 (484)
....|++.. ...+ .-....+.|++.| +++ -+.|+||.+|..++-
T Consensus 61 ~~ag~~~~~---~~~~~n~~w~~~~~~l~~~~---~~~--~v~v~NDa~AaA~gi 107 (110)
T d1q18a1 61 AIACPITGD---WVAMTNHTWAFSIAEMKKNL---GFS--HLEIINDFTAVSMAI 107 (110)
T ss_dssp EESSCCCSS---EECCSSGGGCEEHHHHHHHT---TCS--EEEEEEHHHHHHHHG
T ss_pred cccccccCc---EEeecccCCccCHHHHHHHh---CCC--cEEEEehHHHHhccc
Confidence 888888732 2233 2334567777777 765 146899999998864
|
| >d1zc6a1 c.55.1.5 (A:8-121) Probable N-acetylglucosamine kinase CV2896 {Chromobacterium violaceum [TaxId: 536]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: BadF/BadG/BcrA/BcrD-like domain: Probable N-acetylglucosamine kinase CV2896 species: Chromobacterium violaceum [TaxId: 536]
Probab=98.58 E-value=1.7e-07 Score=77.71 Aligned_cols=108 Identities=19% Similarity=0.156 Sum_probs=69.9
Q ss_pred eeEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCceeeee
Q 011505 95 GTYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGF 174 (484)
Q Consensus 95 G~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~lGf 174 (484)
.+||+||.|||+.|+++++.+|+ ++.+. ..-|.+. ....++.++-|.+.+.+.+++.+.... .-....+++
T Consensus 4 ~y~lGID~GGT~tk~~l~d~~G~---il~~~---~~~~~~~-~~~~~~~~~~i~~~i~~~~~~ag~~~~--~~~~~~~~~ 74 (114)
T d1zc6a1 4 RYLIGVDGGGTGTRIRLHASDGT---PLAMA---EGGASAL-SQGIAKSWQAVLSTLEAAFQQAGLPAA--PASACAIGL 74 (114)
T ss_dssp CEEEEEEECSSCEEEEEEETTCC---EEEEE---EESCCCG-GGCHHHHHHHHHHHHHHHHHHTTCCCC--CGGGEEEEE
T ss_pred cEEEEEEcCcceEEEEEEcCCCC---EEEEE---EccCCCc-ccCHHHHHHHHHHHHHHHHHHcCCChh--hhceeEEEE
Confidence 48999999999999999999885 55432 2234444 346788999999999999887664321 011223444
Q ss_pred eeeeeeeeeecCceEEECccHHHHHHHHHHhcCCCceEEEEEechHHHHhcc
Q 011505 175 TFSFPVMQTSINTGTLVGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGG 226 (484)
Q Consensus 175 tFSfPv~q~~~~~G~l~G~dv~~~L~~al~r~gl~v~v~alvNDtvatlla~ 226 (484)
..+++-+ .+....|.+ +..+..-+.|.||+++++++.
T Consensus 75 g~aG~~~-----------~~~~~~l~~----~~~~~~~v~v~nDa~~A~~ga 111 (114)
T d1zc6a1 75 GLSGVHN-----------RQWAGEFES----QAPGFARLSLATDGYTTLLGA 111 (114)
T ss_dssp EESCCCT-----------TSHHHHHHH----TCCCCSEEEEECHHHHHHHHH
T ss_pred EecCCCc-----------HHHHHHHHH----hCCCCCeEEEECHHHHHHHHh
Confidence 4444332 334444433 333433467999999999873
|
| >d2ch5a2 c.55.1.5 (A:1-117) N-acetylglucosamine kinase, NAGK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: BadF/BadG/BcrA/BcrD-like domain: N-acetylglucosamine kinase, NAGK species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.98 E-value=1.6e-05 Score=66.03 Aligned_cols=110 Identities=21% Similarity=0.213 Sum_probs=71.7
Q ss_pred eEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCceeeeee
Q 011505 96 TYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGFT 175 (484)
Q Consensus 96 ~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~lGft 175 (484)
.|++||-|||+.|+.+++.+|+ ++.+. ..-|.+....+.++..+.|.+.|.+.++..+... ..+...++|.
T Consensus 4 ~~~GIDgGGTkT~~~l~d~~G~---~l~~~---~~g~~N~~~~~~~~~~~~i~~~i~~~l~~~~~~~---~~~i~~i~~G 74 (117)
T d2ch5a2 4 IYGGVEGGGTRSEVLLVSEDGK---ILAEA---DGLSTNHWLIGTDKCVERINEMVNRAKRKAGVDP---LVPLRSLGLS 74 (117)
T ss_dssp EEEEEEECTTCEEEEEEETTSC---EEEEE---EECCCCHHHHCHHHHHHHHHHHHHHHHHHHTCCT---TCCBSEEEEE
T ss_pred EEEEEEcChhhEEEEEECCCCC---EEEEE---EcCCCCcchhhHHHHHHHHHHHHHHHHHHhcCCC---CccccEEEEE
Confidence 7999999999999999999885 55432 2334444334566777888888888877654321 1223456665
Q ss_pred eeeeeeeeecCceEEECccHHHHHHHHHHhc--CCCceEEEEEechHHHHhcc
Q 011505 176 FSFPVMQTSINTGTLVGRDVVEELSRAMAKQ--GLDMSVSALVNDTVGTLAGG 226 (484)
Q Consensus 176 FSfPv~q~~~~~G~l~G~dv~~~L~~al~r~--gl~v~v~alvNDtvatlla~ 226 (484)
.+. +++ .+-.+.|+++|.++ ++..+ +.|.||++++|.+.
T Consensus 75 lAG-~~~----------~~~~~~l~~~l~~~~~~~~~~-v~v~nDa~~Al~~a 115 (117)
T d2ch5a2 75 LSG-GDQ----------EDAGRILIEELRDRFPYLSES-YLITTDAAGSIATA 115 (117)
T ss_dssp ETT-TTC----------HHHHHHHHHHHHHHCTTSBSC-EEEEEHHHHHHHHH
T ss_pred eec-cCc----------chhHHHHHHHHHHHCCCCCce-EEEeccHHHHHhhc
Confidence 554 331 22456678888665 33223 56999999999864
|
| >d1zc6a2 c.55.1.5 (A:122-292) Probable N-acetylglucosamine kinase CV2896 {Chromobacterium violaceum [TaxId: 536]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: BadF/BadG/BcrA/BcrD-like domain: Probable N-acetylglucosamine kinase CV2896 species: Chromobacterium violaceum [TaxId: 536]
Probab=96.43 E-value=0.00096 Score=58.62 Aligned_cols=67 Identities=18% Similarity=0.124 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCcceEEEEeceeeccc-hhHHHHHHHHHHHHhcccCCccEEEEE
Q 011505 383 IVELCNIVATRGARLAAAGILGVLKKMGRDAAKDGDKQKTVIAMDGGLYEHY-AEYSKCLENTLEELLGEELFKNIVIEH 461 (484)
Q Consensus 383 ~~~i~~~V~~RaA~l~Aa~iaaii~~~~~~~~~~~~~~~~~I~vdGsv~~~~-p~f~~~l~~~l~~l~~~~~~~~v~i~~ 461 (484)
.+.+|..|+++++..++..+.++ .+. ....|++.||+++++ |.+.+.++. .+ +.
T Consensus 103 gD~~A~~Il~~a~~~l~~~~~~~----~~~-------~~~~v~l~Ggl~~~~~~~l~~~~~~----~l----------~~ 157 (171)
T d1zc6a2 103 VDPEADALLRQAGEDAWAIARAL----DPQ-------DELPVALCGGLGQALRDWLPPGFRQ----RL----------VA 157 (171)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHH----CTT-------CCSCEEEESHHHHHTGGGSCHHHHH----HC----------CC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHh----ccc-------CCceEEEECchHHHHHHHHHHHHHh----hh----------cC
Confidence 57899999999999888766443 221 113588889998765 334433333 22 12
Q ss_pred cCChhHHHHHHHH
Q 011505 462 SNDGSGIGAALLA 474 (484)
Q Consensus 462 ~~Dgs~iGAAl~A 474 (484)
.+.....||.++|
T Consensus 158 ~~~~p~~GA~~lA 170 (171)
T d1zc6a2 158 PQGDSAQGALLLL 170 (171)
T ss_dssp CSSCHHHHHHHHT
T ss_pred CCCCHHHHHHHHh
Confidence 3455788998876
|
| >d1r59o1 c.55.1.4 (O:5-256) Glycerol kinase {Enterococcus casseliflavus [TaxId: 37734]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Glycerol kinase domain: Glycerol kinase species: Enterococcus casseliflavus [TaxId: 37734]
Probab=94.75 E-value=0.0024 Score=59.01 Aligned_cols=62 Identities=18% Similarity=0.277 Sum_probs=42.6
Q ss_pred eeEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeee--cCCC-ccccCcchhHHHHHHHHHHHHhhcc
Q 011505 95 GTYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVS--IPPH-LMTGTSDALFDYIAAELAKFVSQES 159 (484)
Q Consensus 95 G~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~--ip~~-~~~~~~~~lfd~Ia~~i~~fl~~~~ 159 (484)
.++|+||+|.|++|+++++.+|+ ++.+.+.+++ .|+. ...-+++++++.+.+++++.++...
T Consensus 1 nyvlgiDiGTtsvKa~l~D~~g~---~~~~~~~~~~~~~~~~g~~eqd~~~~~~~~~~~~~~~~~~~~ 65 (252)
T d1r59o1 1 NYVMAIDQGTTSSRAIIFDRNGK---KIGSSQKEFPQYFPKSGWVEHNANEIWNSVQSVIAGAFIESG 65 (252)
T ss_dssp CEEEEEBCCSSBCBCCEECSSSC---BCCCCCCBCCCCCCSTTCCBCCGGGSSSTTTTTSHHHHTTTT
T ss_pred CEEEEEEecccceeeeEEeCCCC---EEEEEEEeCCceecCCCcEEECHHHHHHHHHHHHHHHhhhhh
Confidence 37899999999999999987765 4433332222 1221 2234578888889999998877654
|
| >d1zbsa1 c.55.1.5 (A:108-283) Hypothetical protein PG1100 {Porphyromonas gingivalis [TaxId: 837]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: BadF/BadG/BcrA/BcrD-like domain: Hypothetical protein PG1100 species: Porphyromonas gingivalis [TaxId: 837]
Probab=93.45 E-value=0.029 Score=48.84 Aligned_cols=51 Identities=8% Similarity=0.066 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCcceEEEEeceeeccchhHHHHHHHHHHH
Q 011505 383 IVELCNIVATRGARLAAAGILGVLKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEE 447 (484)
Q Consensus 383 ~~~i~~~V~~RaA~l~Aa~iaaii~~~~~~~~~~~~~~~~~I~vdGsv~~~~p~f~~~l~~~l~~ 447 (484)
.+.+|..++++++..+...+ ..+... ...-|++.||+.. .|++.+++.+++
T Consensus 101 ~d~~a~~Ii~~aa~el~~~~---~~~~~~--------~~~pv~l~Ggv~~---~~~~~l~~~l~~ 151 (176)
T d1zbsa1 101 DIPAVYSLVQNSFDDFLVRN---VLRYNR--------PDLPLHFIGSVAF---HYREVLSSVIKK 151 (176)
T ss_dssp TSHHHHHHHHHHHHHHHHHH---TGGGCC--------TTSCEEEESHHHH---HTHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHH---HHhccc--------CCCeEEEECcHHH---HHHHHHHHHHHH
Confidence 45788889999988875433 122222 1245899999974 466666666654
|
| >d1zbsa2 c.55.1.5 (A:1-107) Hypothetical protein PG1100 {Porphyromonas gingivalis [TaxId: 837]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: BadF/BadG/BcrA/BcrD-like domain: Hypothetical protein PG1100 species: Porphyromonas gingivalis [TaxId: 837]
Probab=92.89 E-value=0.35 Score=38.01 Aligned_cols=104 Identities=13% Similarity=0.035 Sum_probs=54.2
Q ss_pred EEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeecCCCccccCcchhHHHHHHHHHHHHhhcccccccCCCCceeeeeee
Q 011505 97 YYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMTGTSDALFDYIAAELAKFVSQESEEFKLSPGRQRELGFTF 176 (484)
Q Consensus 97 ~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~~~~~~lGftF 176 (484)
+|++|=|||.-+..+++ +|+ ++.+. ..-|.+....+.+++.+.|.+.+.+-+.... .+...+-|..
T Consensus 2 ilivDgGgTKT~~vl~d-~g~---~i~~~---~t~g~Np~~~~~~~~~~~l~~~~~~~l~~~~-------~~i~~i~~g~ 67 (107)
T d1zbsa2 2 ILIGDSGSTKTDWCIAK-EGK---SLGRF---QTSGINPFQQDRNEIDTALRSEVLPAIGQKA-------SSIRAVYFYG 67 (107)
T ss_dssp EEEEEECSSEEEEEEEE-TTE---EEEEE---EEECCCTTTSCHHHHHHHHTTTTHHHHTTST-------TTCCEEEEEE
T ss_pred EEEEEeccccEEEEEEC-CCC---eEEEE---ecCCcCcccCCHHHHHHHHHHHHHHHHhccc-------cCCcEEEEEe
Confidence 58999999999987776 453 33321 2335444334555666655443333222111 1233333333
Q ss_pred eeeeeeeecCceEEECccHHHHHHHHHHhcCCCceEEEEEechHHHHhcc
Q 011505 177 SFPVMQTSINTGTLVGRDVVEELSRAMAKQGLDMSVSALVNDTVGTLAGG 226 (484)
Q Consensus 177 SfPv~q~~~~~G~l~G~dv~~~L~~al~r~gl~v~v~alvNDtvatlla~ 226 (484)
+. ++ ..=.+.+.+.|.+.-.+..-+.|.||+.+++.+.
T Consensus 68 AG-~~-----------~~~~~~i~~~l~~~~~~~~~i~V~~D~~aA~~a~ 105 (107)
T d1zbsa2 68 AG-CT-----------PAKAPMLNEALDSMLPHCDRIEVAGDMLGAARAL 105 (107)
T ss_dssp TT-CC-----------TTTHHHHHHHHHHHSTTCSEEEEECHHHHHHHHH
T ss_pred cC-CC-----------chhhHHHHHHHHHHCCCCCEEEECChHHHHHHHh
Confidence 33 22 1112344455554323333366999999988764
|
| >d1bupa1 c.55.1.1 (A:4-188) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Actin/HSP70 domain: Heat shock protein 70kDa, ATPase fragment species: Cow (Bos taurus) [TaxId: 9913]
Probab=92.08 E-value=0.18 Score=43.51 Aligned_cols=28 Identities=18% Similarity=0.252 Sum_probs=22.6
Q ss_pred HHHHHHHHHhcCCCceEEEEEechHHHHhc
Q 011505 196 VEELSRAMAKQGLDMSVSALVNDTVGTLAG 225 (484)
Q Consensus 196 ~~~L~~al~r~gl~v~v~alvNDtvatlla 225 (484)
.+.+.+|.+..|++ ++.++|+.+|+.++
T Consensus 152 r~~~~~Aa~~AGl~--~~~li~EP~AAAl~ 179 (185)
T d1bupa1 152 RQATKDAGTIAGLN--VLRIINEPTAAAIA 179 (185)
T ss_dssp HHHHHHHHHHTTCE--EEEEEEHHHHHHHH
T ss_pred HHHHHHHHHHcCCC--eEEEEcCHHHHHHH
Confidence 46677888777886 47899999999886
|
| >d1r59o2 c.55.1.4 (O:257-491) Glycerol kinase {Enterococcus casseliflavus [TaxId: 37734]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Glycerol kinase domain: Glycerol kinase species: Enterococcus casseliflavus [TaxId: 37734]
Probab=87.82 E-value=0.89 Score=40.75 Aligned_cols=77 Identities=18% Similarity=0.184 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCcceEEEEeceeeccchhHHHHHHHHHHHHhcccCCccEEEEEcCC
Q 011505 385 ELCNIVATRGARLAAAGILGVLKKMGRDAAKDGDKQKTVIAMDGGLYEHYAEYSKCLENTLEELLGEELFKNIVIEHSND 464 (484)
Q Consensus 385 ~i~~~V~~RaA~l~Aa~iaaii~~~~~~~~~~~~~~~~~I~vdGsv~~~~p~f~~~l~~~l~~l~~~~~~~~v~i~~~~D 464 (484)
++++++++=-|.-+.-.+-.+-+..+.. ...|.++||. .+.+.+.+.+-..+ + ..|.+....+
T Consensus 120 ~l~rAvlEgiaf~~~~~~e~~~~~~g~~--------~~~i~~~GG~-s~s~~~~Qi~Advl----g----~~v~~~~~~e 182 (235)
T d1r59o2 120 DFVRATLQAVAYQSKDVIDTMKKDSGID--------IPLLKVDGGA-AKNDLLMQFQADIL----D----IDVQRAANLE 182 (235)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCC--------CSEEEEEEST-TSCHHHHHHHHHHH----S----SEEEEESCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCC--------CcEEEecCcc-hhCHHHHhhhhhcc----c----eeeeeccccc
Confidence 4555565544444443333443334431 2467888887 67788888777644 2 3566666788
Q ss_pred hhHHHHHHHHHHhc
Q 011505 465 GSGIGAALLAASHS 478 (484)
Q Consensus 465 gs~iGAAl~Aa~~~ 478 (484)
++.+|||++|+...
T Consensus 183 ~~alGaA~la~~~~ 196 (235)
T d1r59o2 183 TTALGAAYLAGLAV 196 (235)
T ss_dssp TTTHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHc
Confidence 99999999998865
|
| >d1e4ft1 c.55.1.1 (T:7-199) Cell division protein FtsA {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Actin/HSP70 domain: Cell division protein FtsA species: Thermotoga maritima [TaxId: 2336]
Probab=85.70 E-value=1.2 Score=38.37 Aligned_cols=30 Identities=13% Similarity=0.176 Sum_probs=23.3
Q ss_pred eeeEEEEEeCCceEEEEEEEeCCCcceeEE
Q 011505 94 KGTYYALDLGGTNFRVLRVHLGGKGVGLIN 123 (484)
Q Consensus 94 ~G~~laiDlGGTnlRv~~V~l~g~~~~i~~ 123 (484)
+.+|.+||+|-+++|+++.+...++.+++.
T Consensus 1 ~~~~~aiDIGs~kI~~~v~~~~~~~~~iig 30 (193)
T d1e4ft1 1 TVFYTSIDIGSRYIKGLVLGKRDQEWEALA 30 (193)
T ss_dssp CEEEEEEEECSSEEEEEEEEEETTEEEEEE
T ss_pred CcEEEEEEcCCCEEEEEEEEEcCCcEEEEE
Confidence 468999999999999998877554445553
|
| >d1u6za2 c.55.1.8 (A:12-135) Exopolyphosphatase Ppx {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Ppx/GppA phosphatase domain: Exopolyphosphatase Ppx species: Escherichia coli [TaxId: 562]
Probab=82.25 E-value=1.9 Score=34.65 Aligned_cols=62 Identities=18% Similarity=0.247 Sum_probs=40.2
Q ss_pred eEEEEEeCCceEEEEEEEeCCCcceeEEeeeeeeecCCCccc-cC-cchhHHHHHHHHHHHHhh
Q 011505 96 TYYALDLGGTNFRVLRVHLGGKGVGLINQEFAEVSIPPHLMT-GT-SDALFDYIAAELAKFVSQ 157 (484)
Q Consensus 96 ~~laiDlGGTnlRv~~V~l~g~~~~i~~~~~~~~~ip~~~~~-~~-~~~lfd~Ia~~i~~fl~~ 157 (484)
.|-+||+|..++|+.+.+..++...++........+...+.. +. .++-.+...++|.+|.+.
T Consensus 1 ~~A~IDiGSNsirl~I~~~~~~~~~~l~~~~~~~rLg~~~~~~g~l~~~~i~~~~~~l~~f~~~ 64 (124)
T d1u6za2 1 EFAAVDLGSNSFHMVIARVVDGAMQIIGRLKQRVHLADGLGPDNMLSEEAMTRGLNCLSLFAER 64 (124)
T ss_dssp CEEEEEECSSCEEEEEEEEETTEEEEEEEEEECCCTGGGBCTTCCBCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEccceEEEEEEEecCCCeeEeeeeeEEeehhhhccccCCcCHHHHHHHHHHHHHHHHH
Confidence 377999999999999998866544455433322334444322 11 345677888888888764
|