Citrus Sinensis ID: 011510
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 484 | ||||||
| 225428267 | 482 | PREDICTED: transmembrane protein 184C [V | 0.993 | 0.997 | 0.814 | 0.0 | |
| 356510628 | 486 | PREDICTED: transmembrane protein 184C-li | 0.981 | 0.977 | 0.804 | 0.0 | |
| 297797818 | 483 | hypothetical protein ARALYDRAFT_352843 [ | 0.981 | 0.983 | 0.790 | 0.0 | |
| 224102803 | 488 | predicted protein [Populus trichocarpa] | 0.977 | 0.969 | 0.815 | 0.0 | |
| 42573219 | 485 | uncharacterized protein [Arabidopsis tha | 0.956 | 0.954 | 0.797 | 0.0 | |
| 356516229 | 492 | PREDICTED: transmembrane protein 184C-li | 0.983 | 0.967 | 0.807 | 0.0 | |
| 357467625 | 480 | Transmembrane protein 184C [Medicago tru | 0.975 | 0.983 | 0.796 | 0.0 | |
| 4539344 | 466 | putative protein [Arabidopsis thaliana] | 0.917 | 0.952 | 0.761 | 0.0 | |
| 449454279 | 476 | PREDICTED: transmembrane protein 184C-li | 0.915 | 0.930 | 0.772 | 0.0 | |
| 413943072 | 480 | hypothetical protein ZEAMMB73_468135 [Ze | 0.962 | 0.970 | 0.690 | 0.0 |
| >gi|225428267|ref|XP_002282426.1| PREDICTED: transmembrane protein 184C [Vitis vinifera] gi|297744492|emb|CBI37754.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 815 bits (2105), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/485 (81%), Positives = 443/485 (91%), Gaps = 4/485 (0%)
Query: 1 MRIASYHNLVSLFAYATPIWASLIAGVLVVVTLSLSMYLLFDHLSAYKNPEEQKFLIGVI 60
M++ + ++ L +TP WASL+AGV V+++LSLSMYLLF+HLS+YKNPEEQKFLIGVI
Sbjct: 1 MKLTGFLDINPL-GSSTPTWASLVAGVFVLISLSLSMYLLFEHLSSYKNPEEQKFLIGVI 59
Query: 61 LMVPCYAVESFVSLTNPTVSIDCEILRDCYESFAMYCFGRYLVACLGGEERTIEFMEREG 120
LMVPCYA+ESFVSL NP++S+DC ILRDCYE+FAMYCFGRYLVACLGGEERTIEFMER+G
Sbjct: 60 LMVPCYAIESFVSLVNPSISVDCAILRDCYEAFAMYCFGRYLVACLGGEERTIEFMERQG 119
Query: 121 RASHKAPLLEHNSERGIVTHPFPMNYILKPWELGRWFYQLVKIGIVQYMIIKSLTALLAV 180
RAS K PLLE+N E+G V HPFPMNY LKPW+LG+WFYQ++KIGIVQYMIIKSL+A+LAV
Sbjct: 120 RASSKTPLLENNCEKGTVKHPFPMNYFLKPWKLGQWFYQVIKIGIVQYMIIKSLSAILAV 179
Query: 181 VLEAFNVYCEGEFKWGCGYPYMAVVLNFSQSWALYCLIQFYTVTKDELAHIKPLAKFLTF 240
+LEAF++YCEG+FKWGCGYPY+AVVLNFSQSWALYCL+QFYTVTKDEL HIKPLAKFLTF
Sbjct: 180 ILEAFSLYCEGDFKWGCGYPYIAVVLNFSQSWALYCLVQFYTVTKDELEHIKPLAKFLTF 239
Query: 241 KSIVFLTWWQGVAIALLYSLGLFKSPIAQGLQFKSSVQDFIICIEMAIASIVHLYVFPAK 300
KSIVFLTWWQGVAIALLY LGLFKS IAQGLQ KSSVQDFIICIEM IASIVHLYVFPAK
Sbjct: 240 KSIVFLTWWQGVAIALLYDLGLFKSAIAQGLQSKSSVQDFIICIEMGIASIVHLYVFPAK 299
Query: 301 PYEQMGECFSGDISVLGDYSADCPLDPDEIRDSERPTKLRLPQPDVDIKSGMTIRESVRD 360
PYE MG+ SG +SVLGDY++ PLDPDE+RDSERPTKLRLP PD+DI+SGMTI ESVRD
Sbjct: 300 PYELMGDRLSGSVSVLGDYASTDPLDPDEVRDSERPTKLRLPHPDIDIRSGMTIGESVRD 359
Query: 361 VFVGGSGYIVNDVKFTVNQAVEPVEKGITKFNEKIHKISQNIKRHDKDRRKTKDDSCIAS 420
VF+GG GYIVNDVKFTVNQAVEPVEKGITKFN+K+HKISQNIKRHDK++RKTKDDSCI
Sbjct: 360 VFIGGGGYIVNDVKFTVNQAVEPVEKGITKFNQKLHKISQNIKRHDKEKRKTKDDSCI-- 417
Query: 421 SHTRRVIRGIDDPLLNGSISDSAPTR-KKHRRKSGYTSGESGGESSSDQNYGGYEIRGRR 479
+ TRRVIRGIDDPLLNGS SDS +R KKHRRKSGYTSGESGGESSSDQ+Y Y+IRG R
Sbjct: 418 TPTRRVIRGIDDPLLNGSFSDSGVSRGKKHRRKSGYTSGESGGESSSDQSYSAYQIRGGR 477
Query: 480 WVTKD 484
WVTKD
Sbjct: 478 WVTKD 482
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356510628|ref|XP_003524039.1| PREDICTED: transmembrane protein 184C-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|297797818|ref|XP_002866793.1| hypothetical protein ARALYDRAFT_352843 [Arabidopsis lyrata subsp. lyrata] gi|297312629|gb|EFH43052.1| hypothetical protein ARALYDRAFT_352843 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|224102803|ref|XP_002312807.1| predicted protein [Populus trichocarpa] gi|222849215|gb|EEE86762.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|42573219|ref|NP_974706.1| uncharacterized protein [Arabidopsis thaliana] gi|332661519|gb|AEE86919.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|356516229|ref|XP_003526798.1| PREDICTED: transmembrane protein 184C-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|357467625|ref|XP_003604097.1| Transmembrane protein 184C [Medicago truncatula] gi|355493145|gb|AES74348.1| Transmembrane protein 184C [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|4539344|emb|CAB37492.1| putative protein [Arabidopsis thaliana] gi|7270820|emb|CAB80501.1| putative protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|449454279|ref|XP_004144883.1| PREDICTED: transmembrane protein 184C-like [Cucumis sativus] gi|449473224|ref|XP_004153822.1| PREDICTED: transmembrane protein 184C-like [Cucumis sativus] gi|449500168|ref|XP_004161023.1| PREDICTED: transmembrane protein 184C-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|413943072|gb|AFW75721.1| hypothetical protein ZEAMMB73_468135 [Zea mays] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 484 | ||||||
| TAIR|locus:2121763 | 485 | LAZ1 "AT4G38360" [Arabidopsis | 0.991 | 0.989 | 0.741 | 4.7e-199 | |
| TAIR|locus:2196005 | 484 | AT1G77220 "AT1G77220" [Arabido | 0.886 | 0.886 | 0.541 | 1.5e-124 | |
| TAIR|locus:2201235 | 403 | AT1G23070 "AT1G23070" [Arabido | 0.735 | 0.883 | 0.465 | 6.7e-88 | |
| MGI|MGI:2384562 | 525 | Tmem184c "transmembrane protei | 0.673 | 0.620 | 0.338 | 3.8e-46 | |
| UNIPROTKB|A5D9H3 | 470 | TMEM34 "Transmembrane protein | 0.576 | 0.593 | 0.341 | 1e-45 | |
| UNIPROTKB|Q17QL9 | 438 | TMEM184C "Transmembrane protei | 0.576 | 0.636 | 0.341 | 1e-45 | |
| UNIPROTKB|Q9NVA4 | 438 | TMEM184C "Transmembrane protei | 0.576 | 0.636 | 0.341 | 2.7e-45 | |
| RGD|727852 | 503 | Tmem184c "transmembrane protei | 0.570 | 0.548 | 0.351 | 6.4e-44 | |
| UNIPROTKB|Q5ZMP3 | 445 | TMEM184C "Transmembrane protei | 0.626 | 0.680 | 0.319 | 1.2e-42 | |
| UNIPROTKB|F1P1L2 | 422 | TMEM184A "Uncharacterized prot | 0.619 | 0.710 | 0.321 | 4.9e-37 |
| TAIR|locus:2121763 LAZ1 "AT4G38360" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1927 (683.4 bits), Expect = 4.7e-199, P = 4.7e-199
Identities = 359/484 (74%), Positives = 403/484 (83%)
Query: 3 IASYHNLVSLFAYATPIWASLIAGVLVVVTLSLSMYLLFDHLSAYKNPEEQKFLIGVILM 62
+ SYH L + AY+ P WAS +AG +V+TLSLS++L+FDHLS YKNPEEQKFLIGVILM
Sbjct: 4 LKSYHLLAA--AYSAPAWASFMAGAFLVLTLSLSLFLVFDHLSTYKNPEEQKFLIGVILM 61
Query: 63 VPCYAVESFVSLTNPTVSIDCEILRDCYESFAMYCFGRYLVACLGGEERTIEFMEREGRA 122
VPCY++ESF SL P++S+DC ILRDCYESFAMYCFGRYLVAC+GGEERTIEFMER+GR
Sbjct: 62 VPCYSIESFASLVKPSISVDCGILRDCYESFAMYCFGRYLVACIGGEERTIEFMERQGRK 121
Query: 123 SHKAPLLEHNSERGIVTHPFPMNYILKPWELGRWFYQLVKIGIVQYMIIKSLTALLAVVL 182
S K PLL+H E+GI+ HPFPMN LKPW L WFYQ+VK GIVQYMIIKSLTAL A++L
Sbjct: 122 SFKTPLLDHKDEKGIIKHPFPMNLFLKPWRLSPWFYQVVKFGIVQYMIIKSLTALTALIL 181
Query: 183 EAFNVYCEGEFKWGCGYPYMAVVLNFSQSWALYCLIQFYTVTKDELAHIKPLAKFLTFKS 242
EAF VYCEGEFKWGCGYPY+AVVLNFSQSWALYCL+QFY TKDELAHI+PLAKFLTFKS
Sbjct: 182 EAFGVYCEGEFKWGCGYPYLAVVLNFSQSWALYCLVQFYGATKDELAHIQPLAKFLTFKS 241
Query: 243 IVFLTWWQGVAIALLYSLGLFKSPIAQGLQFKSSVQDFIICIEMAIASIVHLYVFPAKPY 302
IVFLTWWQGVAIALL SLGLFKS IAQ LQ K+SVQDFIICIEM IAS+VHLYVFPAKPY
Sbjct: 242 IVFLTWWQGVAIALLSSLGLFKSSIAQSLQLKTSVQDFIICIEMGIASVVHLYVFPAKPY 301
Query: 303 EQMGECFSGDISVLGDY-SADCPLDPDEIRDSERPTKLRLPQPDVDIKSGMTIRESVRDV 361
MG+ F+G +SVLGDY S DCP+DPDEIRDSERPTK+RLP PDVDI+SGMTI+ES+RDV
Sbjct: 302 GLMGDRFTGSVSVLGDYASVDCPIDPDEIRDSERPTKVRLPHPDVDIRSGMTIKESMRDV 361
Query: 362 FVGGSGYIVNDVKFTVNQAVEPVEKGITKFNEKIHKISQNIXXXXXXXXXXXXXSCIASS 421
FVGG YIV DV+FTV QAVEP+EK ITKFNEK+HKISQNI SC++SS
Sbjct: 362 FVGGGEYIVKDVRFTVTQAVEPMEKSITKFNEKLHKISQNIKKHDKEKRRVKDDSCMSSS 421
Query: 422 HTRRVIRGIDDPLLNGSISDSAPTR-KKHRRKXXXXXXXXXXXXXXDQNYGGYEIRGRRW 480
+RRVIRGIDDPLLNGS SDS TR KKHRRK DQ YGG+E+RGRRW
Sbjct: 422 PSRRVIRGIDDPLLNGSFSDSGVTRTKKHRRKSGYTSAESGGESSSDQAYGGFEVRGRRW 481
Query: 481 VTKD 484
+TKD
Sbjct: 482 ITKD 485
|
|
| TAIR|locus:2196005 AT1G77220 "AT1G77220" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2201235 AT1G23070 "AT1G23070" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| MGI|MGI:2384562 Tmem184c "transmembrane protein 184C" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| UNIPROTKB|A5D9H3 TMEM34 "Transmembrane protein 34" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q17QL9 TMEM184C "Transmembrane protein 184C" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q9NVA4 TMEM184C "Transmembrane protein 184C" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| RGD|727852 Tmem184c "transmembrane protein 184C" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q5ZMP3 TMEM184C "Transmembrane protein 184C" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1P1L2 TMEM184A "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| fgenesh1_pg.C_scaffold_7000016 | annotation not avaliable (483 aa) | |||||||
(Arabidopsis lyrata) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 484 | |||
| pfam03619 | 272 | pfam03619, Solute_trans_a, Organic solute transpor | 1e-129 |
| >gnl|CDD|217643 pfam03619, Solute_trans_a, Organic solute transporter Ostalpha | Back alignment and domain information |
|---|
Score = 375 bits (966), Expect = e-129
Identities = 127/288 (44%), Positives = 177/288 (61%), Gaps = 19/288 (6%)
Query: 18 PIWASLIAGVLVVVTLSLSMYLLFDHLSAYKNPEEQKFLIGVILMVPCYAVESFVSLTNP 77
P WA LIAG+ V++ L +S++L+ HL+ Y PEEQ+ +I ++LMVP YAV SF+SL P
Sbjct: 1 PTWAILIAGLFVLLALLISLFLILQHLTNYTKPEEQRLIIRILLMVPIYAVISFLSLLFP 60
Query: 78 TVSIDCEILRDCYESFAMYCFGRYLVACLGGEERTIEFMEREGRASHKAPLLEHNSERGI 137
+I +++RDCYE+F +Y F L+A LGGE I +E +
Sbjct: 61 KAAIYFDLIRDCYEAFVIYTFFSLLIAYLGGERNIIRLLE----------------GKPP 104
Query: 138 VTHPFPMN--YILKPWELGRWFYQLVKIGIVQYMIIKSLTALLAVVLEAFNVYCEGEFKW 195
+ HPFP+ +L+ F+ K G++QY+++K L A+LA++L+AF VY EG F
Sbjct: 105 IRHPFPLLTKCLLRTDRSDPTFFLRCKRGVLQYVVVKPLCAILAIILQAFGVYGEGSFSP 164
Query: 196 GCGYPYMAVVLNFSQSWALYCLIQFYTVTKDELAHIKPLAKFLTFKSIVFLTWWQGVAIA 255
GY Y+ ++ N S S ALYCL+ FY KDELA KPL KFL K I+F ++WQGV I+
Sbjct: 165 DSGYLYLTIIYNISVSLALYCLVLFYKALKDELAPFKPLLKFLCIKLIIFFSFWQGVLIS 224
Query: 256 LLYSLGLFKSPIAQGLQ-FKSSVQDFIICIEMAIASIVHLYVFPAKPY 302
+L SLGL K A + +Q+F+ICIEM I +I HLY FP KPY
Sbjct: 225 ILVSLGLIKPTEAWEEPELSAGIQNFLICIEMFIFAIAHLYAFPYKPY 272
|
This family is a transmembrane organic solute transport protein. In vertebrates these proteins form a complex with Ostbeta, and function as bile transporters. In plants they may transport brassinosteroid-like compounds and act as regulators of cell death. Length = 272 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 484 | |||
| PF03619 | 274 | Solute_trans_a: Organic solute transporter Ostalph | 100.0 | |
| KOG2641 | 386 | consensus Predicted seven transmembrane receptor - | 100.0 |
| >PF03619 Solute_trans_a: Organic solute transporter Ostalpha; InterPro: IPR005178 This is a family of mainly hypothetical proteins of no known function | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-77 Score=595.94 Aligned_cols=269 Identities=41% Similarity=0.840 Sum_probs=256.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCChhhhHHhhhhhhhhhHHHHHhHhhhhcCchhhhhHHHHHHHHHHHHHH
Q 011510 18 PIWASLIAGVLVVVTLSLSMYLLFDHLSAYKNPEEQKFLIGVILMVPCYAVESFVSLTNPTVSIDCEILRDCYESFAMYC 97 (484)
Q Consensus 18 ~~~a~~iag~f~lla~~iS~~~I~~HL~~Yt~P~~Qr~IIRIL~MvPIYAi~S~lSL~~Prasiy~d~iRd~YEAfvLY~ 97 (484)
|+|++++||+|+++|+++|+++|++|++||++|++||+|+||++|+|+||++||+|+++||+++|++++|||||||++|+
T Consensus 1 ~~~~~~ia~~~~~~~~~is~~~i~~hl~~y~~P~~Qr~iirIl~m~Piyai~S~~sl~~p~~~~~~~~ir~~Yea~~ly~ 80 (274)
T PF03619_consen 1 HTWAWIIAGIFALLTILISLFLIYQHLRNYSKPEEQRYIIRILLMVPIYAICSLLSLLFPRAAIYLDFIRDCYEAFVLYS 80 (274)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCChhHHHHHHHHhhcccCCCccccccccCCcccCCccc---cccccccccChHHHHHHHhhhhhhhHHHHH
Q 011510 98 FGRYLVACLGGEERTIEFMEREGRASHKAPLLEHNSERGIVTHPFPM---NYILKPWELGRWFYQLVKIGIVQYMIIKSL 174 (484)
Q Consensus 98 F~~LLi~ylGGe~~~i~~Le~~~~~~~~~~~l~~~~~~~~~~h~~P~---~ccl~~~~l~~~fl~~~K~gVLQy~IvKPl 174 (484)
|++||++|+|||+++++.+++ +++.+|+||+ |||+|++++|++++++||+||+||+++||+
T Consensus 81 F~~Ll~~y~gg~~~~~~~l~~----------------~~~~~~~~P~~~~~~c~~~~~~~~~~l~~~k~~VlQ~~vvrpl 144 (274)
T PF03619_consen 81 FFSLLLNYLGGEEALVEVLSG----------------KPPIKHPWPCCCCCCCLPPWPMTKRFLRRCKWGVLQYVVVRPL 144 (274)
T ss_pred HHHHHHHHhCCHHHHHHHhhc----------------CCCCCCCCcccccccCCCccccchHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999887752 4456689998 366799999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCccccccccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhccCcchhhHHHHHHHHHHHHHHHH
Q 011510 175 TALLAVVLEAFNVYCEGEFKWGCGYPYMAVVLNFSQSWALYCLIQFYTVTKDELAHIKPLAKFLTFKSIVFLTWWQGVAI 254 (484)
Q Consensus 175 ~ailaiIl~~~GvY~eg~~s~~~~ylyl~iI~niSv~lALY~Lv~FY~atke~L~~~kPl~KFl~IK~IVFltfwQgvii 254 (484)
+++++++++++|+||||+++++.+|+|+++++|+|+++|||||++||+++|++|+++||++||+|+|+|||++|||+++|
T Consensus 145 ~~~i~iil~~~g~y~~~~~~~~~~~~~l~ii~~iS~~~Aly~L~~fy~~~~~~L~~~~p~~KF~~iK~vvfl~f~Q~~ii 224 (274)
T PF03619_consen 145 LSIISIILEAFGVYCEGSFSPHSAYLYLTIINNISVTLALYGLVIFYRATKEELKPYRPLLKFLCIKLVVFLSFWQGFII 224 (274)
T ss_pred HHHHHHHHHHHHHhccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCCCc-ch-hhHHHHHhhHHHHHHHHHHHHHHhhccccccc
Q 011510 255 ALLYSLGLFKSPIA-QG-LQFKSSVQDFIICIEMAIASIVHLYVFPAKPY 302 (484)
Q Consensus 255 siL~~~GvI~~~~~-~~-~~~~~~iqnfLICiEM~ifAilh~~AFp~~pY 302 (484)
++|.+.|++++... +. .++++++||+|+|+||+++|++|+||||++||
T Consensus 225 ~iL~~~g~i~~~~~~~~~~~~~~~i~~~LicvEM~i~ai~~~~af~~~~y 274 (274)
T PF03619_consen 225 SILASFGVIPCTPPWSSPEDIASGIQNFLICVEMFIFAILHRYAFPYSPY 274 (274)
T ss_pred HHHHHCCCcCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCC
Confidence 99999999998543 22 38999999999999999999999999999998
|
|
| >KOG2641 consensus Predicted seven transmembrane receptor - rhodopsin family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 484 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 7e-07 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 51.0 bits (121), Expect = 7e-07
Identities = 68/454 (14%), Positives = 132/454 (29%), Gaps = 121/454 (26%)
Query: 41 FDHLSAYKNPEEQ-KFLIGVILMVPCYAVESFVSLTNPTVSIDCEILRDCYESFAMYCFG 99
DH+ K+ L +L V+ FV E+LR Y+ F M
Sbjct: 51 IDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVE----------EVLRINYK-FLM---S 96
Query: 100 RYLVACLGGEERTIEFMEREGRASHKAPLLEHNSERGIVTHPF-PMN-YILKP-WELGRW 156
T ++E+ R +N F N L+P +L +
Sbjct: 97 PIKTEQRQPSMMTRMYIEQRDRL--------YND-----NQVFAKYNVSRLQPYLKLRQA 143
Query: 157 FYQL-VKIGIVQY-M--IIKSLTALLAVVLEAFNVYCEGEFK--W---G-CGYP------ 200
+L ++ + K+ + V ++ V C+ +FK W C P
Sbjct: 144 LLELRPAKNVLIDGVLGSGKT--WVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEM 201
Query: 201 ----YMAVVLNFSQSWALYCLIQFYTV-TKDELAHI---KPLAKFL----------TFKS 242
+ N++ I+ + EL + KP L + +
Sbjct: 202 LQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNA 261
Query: 243 ------IVFLTWWQGVAIAL--LYSLGLFKSPIAQGLQFKSSVQDFIICIEMAIASI--- 291
I+ T ++ V L + + + L + ++ +
Sbjct: 262 FNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPRE 321
Query: 292 ------VHLYVFPA---------KPYEQMG-ECFSGDISVLGDYSADCPLDPDEIRDSER 335
L + ++ + + + I S + L+P E R +
Sbjct: 322 VLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIES----SLNV-LEPAEYR--KM 374
Query: 336 PTKLRLPQPDVDIKSGMTIRESVRDVFVGGSGYIVNDVKFTVNQAVEP--VEKGITKFNE 393
+L + P I + + I +DV VN+ + VEK +
Sbjct: 375 FDRLSVFPPSAHIP------TILLSLIWFDV--IKSDVMVVVNKLHKYSLVEKQPKESTI 426
Query: 394 KIHKISQNIKRHDKDRRKTKDDSCIASSHTRRVI 427
I I +K ++ + H R ++
Sbjct: 427 SIPSIYLELKVKLENE---------YALH-RSIV 450
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00