Citrus Sinensis ID: 011547

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480---
MEEGGSSTNSSEEIVYPFVARFSLFDDLFRITCGFLKLLQVSSEKVIVKDSGGRTVESQLLPLSNATLRIRNRYVKAYLGKAPSETLKYWLAFSASVPPLGFSTYTVSIAKPTGPSSTISMVYTSEDSTSNSIEVGQGNLRLLYSADEGKLTHYVNNRNKVTASAGQSYSYYSGNDGTDKDPQASGAYVFRPNDTFSINSESQVQLTIVRGPLLDEVHQQLSPWISQIRDFRTDWDLQVNQLVAGNYYPVNLGIYVQDDNAELSLLVDRSVGGSSLVDGQIELMLHRRLLHDDVRGVGEVLNETVCVQNECEGLTIQGKFYLRIDHLGEGANWRRSVGQEIYSPLLLAFTEQDGDNWMNSHVSTFSGIDSFYNLPSNIAIITLQTGEDKDYSVLTSVELKKLFPNKKISKVTEMNLSANQERATMEKKRLAWKVEGSAEEETKVVRGGPVDPATLVVELAPMEIRTFFIDFDRIKIIIGYLAI
cccccccccccEEEEcccccEEEEEcccccEEEEEEEEEEEccccEEEEcccccEEEEEccccccHHHEEcccEEEEcccccccccccEEEEEEEEccccEEEEEEEEEccccccccEEEEEEEcccccccEEEEccccEEEEEEcccccEEEEEEccccEEEEEEEEEEEEcccccccccccccccEEEccccccccccccEEEEEEEEccccccccEEEccEEEcccccccccccEEEEcccccEEccccEEEEEEccEEEEEEEccccccccccccEEEEEEEEccccccccccccccccccccccccccEEEEcEEEEEEcccccccccccccccccccccEEEEccccccccccccccccccccccccccccEEEEEEccccccccccEEEEEEccccccccEEEEEEccccccHHHHHHHHHcccEEEEcccccccEEEccccccccccEEEEcccEEEEEEEEEEEEEEEEEEEcc
cccccccccccccEEEEcccEEEEEccccccccEEEEEEEccccEEEEEcccccEEEEEEEEcccHHHcccccEEEEEEcccccccccEEEEEEEEccccccEEEEEEEcccccccccccccccccccccccEEEEccEEEEEEccccccEEEEEEcccccEEEEEEEEEEEEcccccccccccccEEEEccccccccccccccEEEEEcccHHHHHHHHHHHHHHHHHcccccccccEEcccccHcEEEccEEEEEcccEEEEEEEcccEEEEcccccEEEEEEEEEEccccccccccccccccEEcccccEEEEEEEEEEEEcccccHHHHHHHHHHHHcccHHHHcccccccccccccccccccccccccccccEEEEEEEccccccccccEEEEHHHHcccccEEEEEEEEccccccHHHHHHHHccccccccccccccccccccccccccEEEEcccEEEEEEEEEEccEEEEcEEcc
meeggsstnsseeivYPFVARFSLFDDLFRITCGFLKLLQVSSEKVIvkdsggrtvesqllplsnatLRIRNRYVKAYLGKAPSETLKYWLAFsasvpplgfstytvsiakptgpsstismvytsedstsnsievGQGNLRLlysadegklthyvnnrnkvtasagqsysyysgndgtdkdpqasgayvfrpndtfsinseSQVQLTIVRGPLLDEVHQQLSPWISQIRDFRTDWDLQVNQlvagnyypvnlgiyvqddnaeLSLLVdrsvggsslvdGQIELMLHRRLLHDDVRGVGEVLNETVCvqnecegltiqgKFYLRIdhlgeganwrrsvgqeiySPLLLAFteqdgdnwmnshvstfsgidsfynlpsnIAIITLqtgedkdysvLTSVELkklfpnkkiskVTEMNLSANQERATMEKKRLAWKVegsaeeetkvvrggpvdpatlVVELAPMEIRTFFIDFDRIKIIIGYLAI
meeggsstnsseeivYPFVARFSLFDDLFRITCGFLKLLQVSSEKVivkdsggrtvesqllplsnatlriRNRYVKAYLGKAPSETLKYWLAFSASVPPLGFSTYTVSIAKPTGPSSTISMVYTSEDSTSNSIEVGQGNLRLLYSADEGKLTHYVNNRNKVTASAGQSYSYYSGNDGTDKDPQASGAYVFRPNDTFSINSESQVQLTIVRGPLLDEVHQQLSPWISQIRDFRTDWDLQVNQLVAGNYYPVNLGIYVQDDNAELSLLVDRSVGGSSLVDGQIELMLHRRLLHDDVRGVGEVLNETVCVQNECEGLTIQGKFYLRIDHLGEGANWRRSVGQEIYSPLLLAFTEQDGDNWMNSHVSTFSGIDSFYNLPSNIAIITLQTGEDKDYSVLTSVELkklfpnkkiskvtemnlsanqeratMEKKRLAWKvegsaeeetkvvrggpvdpatlvVELAPMEirtffidfdriKIIIGYLAI
MeeggsstnsseeIVYPFVARFSLFDDLFRITCGFLKLLQVSSEKVIVKDSGGRTVESQLLPLSNATLRIRNRYVKAYLGKAPSETLKYWLAFSASVPPLGFSTYTVSIAKPTGPSSTISMVYTSEDSTSNSIEVGQGNLRLLYSADEGKLTHYVNNRNKVTASAGQsysyysGNDGTDKDPQASGAYVFRPNDTFSINSESQVQLTIVRGPLLDEVHQQLSPWISQIRDFRTDWDLQVNQLVAGNYYPVNLGIYVQDDNAELSLLVDRSVGGSSLVDGQIELMLHRRLLHDDVRGVGEVLNETVCVQNECEGLTIQGKFYLRIDHLGEGANWRRSVGQEIYSPLLLAFTEQDGDNWMNSHVSTFSGIDSFYNLPSNIAIITLQTGEDKDYSVLTSVELKKLFPNKKISKVTEMNLSANQERATMEKKRLAWKVEGSAEEETKVVRGGPVDPATLVVELAPMEirtffidfdrikiiiGYLAI
*************IVYPFVARFSLFDDLFRITCGFLKLLQVSSEKVIVKDSGGRTVESQLLPLSNATLRIRNRYVKAYLGKAPSETLKYWLAFSASVPPLGFSTYTVSIA*************************GQGNLRLLYSADEGKLTHYVNNRN***************************AYVFRPNDTFSINSESQVQLTIVRGPLLDEVHQQLSPWISQIRDFRTDWDLQVNQLVAGNYYPVNLGIYVQDDNAELSLLVDRSVGGSSLVDGQIELMLHRRLLHDDVRGVGEVLNETVCVQNECEGLTIQGKFYLRIDHLGEGANWRRSVGQEIYSPLLLAFTEQDGDNWMNSHVSTFSGIDSFYNLPSNIAIITLQTGEDKDYSVLTSVELKKLFPN***************************************VRGGPVDPATLVVELAPMEIRTFFIDFDRIKIIIGYLA*
**************VYPFVARFSLFDDLFRITCGFLKLLQVSSEKVIVKDSGGRTVESQLLPLSNATLRIRNRYVKAYLGKAPSETLKYWLAFSASVPPLGFSTY****************************EVGQGNLRLLYSADEGKLTHYVNNRNKVTASAGQSYSYYSGNDGTDKDPQASGAYVFRPNDTFSINSESQVQLTIVRGPLLDEVHQQLSPWISQIRDFRTDWDLQVNQLVAGNYYPVNLGIYVQDDNAELSLLVDRSVGGSSLVDGQIELMLHRRLLHDDVRGVGEVLNETVCVQNECEGLTIQGK*********************IYSPLL***********************SFYNLPSNIAIITLQTGEDKDYSVLTSVELKKLFPNKKISKVTEMNLSANQERATMEKKRLA*************************VELAPMEIRTFFIDFDRIKIIIGYLAI
***********EEIVYPFVARFSLFDDLFRITCGFLKLLQVSSEKVIVKDSGGRTVESQLLPLSNATLRIRNRYVKAYLGKAPSETLKYWLAFSASVPPLGFSTYTVSIAKPTGPSSTISMVYTSEDSTSNSIEVGQGNLRLLYSADEGKLTHYVNNRNKVTASAGQSYSYYSGNDGTDKDPQASGAYVFRPNDTFSINSESQVQLTIVRGPLLDEVHQQLSPWISQIRDFRTDWDLQVNQLVAGNYYPVNLGIYVQDDNAELSLLVDRSVGGSSLVDGQIELMLHRRLLHDDVRGVGEVLNETVCVQNECEGLTIQGKFYLRIDHLGEGANWRRSVGQEIYSPLLLAFTEQDGDNWMNSHVSTFSGIDSFYNLPSNIAIITLQTGEDKDYSVLTSVELKKLFPNKKISKVTEMNLSANQERATMEKKRLAWKVEGSAEEETKVVRGGPVDPATLVVELAPMEIRTFFIDFDRIKIIIGYLAI
**********SEEIVYPFVARFSLFDDLFRITCGFLKLLQVSSEKVIVKDSGGRTVESQLLPLSNATLRIRNRYVKAYLGKAPSETLKYWLAFSASVPPLGFSTYTVSIAK******************SNSIEVGQGNLRLLYSADEGKLTHYVNNRNKVTASAGQSYSYYSGNDGTDKDPQASGAYVFRPNDTFSINSESQVQLTIVRGPLLDEVHQQLSPWISQIRDFRTDWDLQVNQLVAGNYYPVNLGIYVQDDNAELSLLVDRSVGGSSLVDGQIELMLHRRLLHDDVRGVGEVLNETVCVQNECEGLTIQGKFYLRIDHLGEGANWRRSVGQEIYSPLLLAFTEQDGDNWMNSHVSTFSGIDSFYNLPSNIAIITLQTGEDKDYSVLTSVELKKLFPNKKISKVTEMNLSANQERATMEKKRLAWKVE****************PATLVVELAPMEIRTFFIDFDRIKIIIGYLAI
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MEEGGSSTNSSEEIVYPFVARFSLFDDLFRITCGFLKLLQVSSEKVIVKDSGGRTVESQLLPLSNATLRIRNRYVKAYLGKAPSETLKYWLAFSASVPPLGFSTYTVSIAKPTGPSSTISMVYTSEDSTSNSIEVGQGNLRLLYSADEGKLTHYVNNRNKVTASAGQSYSYYSGNDGTDKDPQASGAYVFRPNDTFSINSESQVQLTIVRGPLLDEVHQQLSPWISQIRDFRTDWDLQVNQLVAGNYYPVNLGIYVQDDNAELSLLVDRSVGGSSLVDGQIELMLHRRLLHDDVRGVGEVLNETVCVQNECEGLTIQGKFYLRIDHLGEGANWRRSVGQEIYSPLLLAFTEQDGDNWMNSHVSTFSGIDSFYNLPSNIAIITLQTGEDKDYSVLTSVELKKLFPNKKISKVTEMNLSANQERATMEKKRLAWKVEGSAEEETKVVRGGPVDPATLVVELAPMEIRTFFIDFDRIKIIIGYLAI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query483 2.2.26 [Sep-21-2011]
O007541011 Lysosomal alpha-mannosida yes no 0.857 0.409 0.299 2e-44
Q60HE91012 Lysosomal alpha-mannosida N/A no 0.857 0.409 0.297 8e-44
Q8VHC81007 Lysosomal alpha-mannosida yes no 0.745 0.357 0.301 8e-41
Q29451999 Lysosomal alpha-mannosida yes no 0.795 0.384 0.287 3e-39
O091591013 Lysosomal alpha-mannosida yes no 0.766 0.365 0.288 4e-38
P340981010 Lysosomal alpha-mannosida yes no 0.763 0.365 0.267 3e-35
O464321007 Lysosomal alpha-mannosida N/A no 0.815 0.391 0.287 7e-35
Q244511108 Alpha-mannosidase 2 OS=Dr no no 0.513 0.223 0.272 3e-13
P496411150 Alpha-mannosidase 2x OS=H no no 0.397 0.166 0.275 4e-08
Q167061144 Alpha-mannosidase 2 OS=Ho no no 0.824 0.347 0.233 4e-08
>sp|O00754|MA2B1_HUMAN Lysosomal alpha-mannosidase OS=Homo sapiens GN=MAN2B1 PE=1 SV=3 Back     alignment and function desciption
 Score =  180 bits (457), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 159/531 (29%), Positives = 235/531 (44%), Gaps = 117/531 (22%)

Query: 19   VARFSL--FDDLFRITCGFLKLLQVSSEKVIVKDSGGRTVESQ--LLPLSNATLRIRNRY 74
             ARF +  ++ L R    ++  L VS    +VKD  GRTV S   + P S++        
Sbjct: 507  AARFQVIVYNPLGR-KVNWMVRLPVSEGVFVVKDPNGRTVPSDVVIFPSSDSQAH----- 560

Query: 75   VKAYLGKAPSETLKYWLAFSASVPPLGFSTYTVSIAKPTGPSSTISMVYTSEDSTSNSIE 134
                    P E L     FSAS+P LGFSTY+V+      P +          S S ++ 
Sbjct: 561  --------PPELL-----FSASLPALGFSTYSVAQVPRWKPQARAPQP-IPRRSWSPALT 606

Query: 135  VGQGNLRLLYSADEGKLTHYVNNRNKVTASAGQSYSYYSGNDGTDKDPQASGAYVFRPND 194
            +   ++R  +  D G L   +N   ++     Q++ +Y+ + G ++  QASGAY+FRPN 
Sbjct: 607  IENEHIRATFDPDTGLLMEIMNMNQQLLLPVRQTFFWYNASIGDNESDQASGAYIFRPNQ 666

Query: 195  TFSINSESQVQLTIVRGPLLDEVHQQLSPWISQI-------RDFRTDWDL---------- 237
               +      Q+ +V+ PL+ EVHQ  S W SQ+       R    +W +          
Sbjct: 667  QKPLPVSRWAQIHLVKTPLVQEVHQNFSAWCSQVVRLYPGQRHLELEWSVGPIPVGDTWG 726

Query: 238  -------------------------------------QVNQL--VAGNYYPVNLGIYVQD 258
                                                 ++NQ   VAGNYYPVN  IY+ D
Sbjct: 727  KEVISRFDTPLETKGRFYTDSNGREILERRRDYRPTWKLNQTEPVAGNYYPVNTRIYITD 786

Query: 259  DNAELSLLVDRSVGGSSLVDGQIELMLHRRLLHDDVRGVGEVLNETVCVQNECEGLTIQG 318
             N +L++L DRS GGSSL DG +ELM+HRRLL DD RGV E L E         G  ++G
Sbjct: 787  GNMQLTVLTDRSQGGSSLRDGSLELMVHRRLLKDDGRGVSEPLMEN------GSGAWVRG 840

Query: 319  KFYLRIDHLGEGANWRRSVG-QEIYSP-LLLAFTEQDGDNWMNSHVSTFSGIDSFYNLPS 376
            +  + +D     A   R +  QE+ +P ++LA       N      + FSG+    +LP 
Sbjct: 841  RHLVLLDTAQAAAAGHRLLAEQEVLAPQVVLAPGGGAAYNLGAPPRTQFSGLRR--DLPP 898

Query: 377  NIAIITLQT----------------GED--KDYSVLTSVELKKLFPNKKISKVTEMNLSA 418
            ++ ++TL +                GED  ++ S   ++ L+ LF    I+++ E  L A
Sbjct: 899  SVHLLTLASWGPEMVLLRLEHQFAVGEDSGRNLSAPVTLNLRDLFSTFTITRLQETTLVA 958

Query: 419  NQERATMEKKRLAWKVE-GSAEEETKVVRGGPVDPATLVVELAPMEIRTFF 468
            NQ R      RL W    G    +T       +DPA + +E  PMEIRTF 
Sbjct: 959  NQLREA--ASRLKWTTNTGPTPHQTPYQ----LDPANITLE--PMEIRTFL 1001
Necessary for the catabolism of N-linked carbohydrates released during glycoprotein turnover. Cleaves all known types of alpha-mannosidic linkages.
Homo sapiens (taxid: 9606)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 2EC: 4
>sp|Q60HE9|MA2B1_MACFA Lysosomal alpha-mannosidase OS=Macaca fascicularis GN=MAN2B1 PE=2 SV=1 Back     alignment and function description
>sp|Q8VHC8|MA2B1_CAVPO Lysosomal alpha-mannosidase OS=Cavia porcellus GN=MAN2B1 PE=1 SV=1 Back     alignment and function description
>sp|Q29451|MA2B1_BOVIN Lysosomal alpha-mannosidase OS=Bos taurus GN=MAN2B1 PE=1 SV=3 Back     alignment and function description
>sp|O09159|MA2B1_MOUSE Lysosomal alpha-mannosidase OS=Mus musculus GN=Man2b1 PE=2 SV=4 Back     alignment and function description
>sp|P34098|MANA_DICDI Lysosomal alpha-mannosidase OS=Dictyostelium discoideum GN=manA PE=1 SV=2 Back     alignment and function description
>sp|O46432|MA2B1_FELCA Lysosomal alpha-mannosidase OS=Felis catus GN=MAN2B1 PE=2 SV=1 Back     alignment and function description
>sp|Q24451|MAN2_DROME Alpha-mannosidase 2 OS=Drosophila melanogaster GN=alpha-Man-II PE=1 SV=2 Back     alignment and function description
>sp|P49641|MA2A2_HUMAN Alpha-mannosidase 2x OS=Homo sapiens GN=MAN2A2 PE=2 SV=3 Back     alignment and function description
>sp|Q16706|MA2A1_HUMAN Alpha-mannosidase 2 OS=Homo sapiens GN=MAN2A1 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query483
255543553 1016 lysosomal alpha-mannosidase, putative [R 0.908 0.432 0.649 0.0
118486277 732 unknown [Populus trichocarpa] 0.908 0.599 0.641 0.0
224065294 1020 predicted protein [Populus trichocarpa] 0.908 0.430 0.641 0.0
296082270 1013 unnamed protein product [Vitis vinifera] 0.906 0.432 0.630 1e-177
359488551 1027 PREDICTED: lysosomal alpha-mannosidase-l 0.906 0.426 0.630 1e-177
357508427 1022 Lysosomal alpha-mannosidase [Medicago tr 0.906 0.428 0.622 1e-175
356570259 1023 PREDICTED: lysosomal alpha-mannosidase-l 0.906 0.428 0.619 1e-171
359488553 1025 PREDICTED: lysosomal alpha-mannosidase-l 0.904 0.426 0.588 1e-167
224131400 1009 predicted protein [Populus trichocarpa] 0.892 0.427 0.568 1e-154
440546588 1024 alpha-mannosidase [Prunus persica] 0.900 0.424 0.555 1e-152
>gi|255543553|ref|XP_002512839.1| lysosomal alpha-mannosidase, putative [Ricinus communis] gi|223547850|gb|EEF49342.1| lysosomal alpha-mannosidase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  654 bits (1688), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/511 (64%), Positives = 380/511 (74%), Gaps = 72/511 (14%)

Query: 39   LQVSSEKVIVKDSGGRTVESQLLPLSNATLRIRNRYVKAYLGKAPSETLKYWLAFSASVP 98
            + VS+EKV+VKDS GR +ESQLLP+SNATLR+RN++VK YLGK PSE LKYWLAFS S+P
Sbjct: 505  IPVSTEKVVVKDSTGREIESQLLPISNATLRMRNKFVKVYLGKFPSEQLKYWLAFSVSLP 564

Query: 99   PLGFSTYTVSIAKPTGPSSTISMVYTSEDSTSNSIEVGQGNLRLLYSADEGKLTHYVNNR 158
            PLGFSTY VS ++ T PSSTIS VYT E+STS +IEVGQG+LRLLYSA+ GKLTHY+NNR
Sbjct: 565  PLGFSTYMVSSSEGTEPSSTISTVYTLEESTSGTIEVGQGSLRLLYSANAGKLTHYLNNR 624

Query: 159  NKVTASAGQSYSYYSGNDGTDKDPQASGAYVFRPNDTFSINSESQVQLTIVRGPLLD--- 215
              VT +  QSY YYSGNDGTD DPQASGAYVFRPN TFSI SE QV LT VRG LLD   
Sbjct: 625  MLVTTAVEQSYGYYSGNDGTDTDPQASGAYVFRPNGTFSIKSEYQVPLTFVRGNLLDEVH 684

Query: 216  --------------------EVHQQLSP-------------------------------- 223
                                EV   + P                                
Sbjct: 685  QQLNPWISQINRVYKGKEHAEVEFTIGPIPVDDGIGKEITTQITTTMATNKTFYTDSNGR 744

Query: 224  -WISQIRDFRTDWDLQVNQLVAGNYYPVNLGIYVQDDNAELSLLVDRSVGGSSLVDGQIE 282
             +I ++RDFRTDWD++VNQ +AGNYYP+NLGIYVQD   ELS+LVDR+VGGSSLVDGQIE
Sbjct: 745  DFIKRVRDFRTDWDVEVNQPIAGNYYPINLGIYVQDSTTELSVLVDRAVGGSSLVDGQIE 804

Query: 283  LMLHRRLLHDDVRGVGEVLNETVCVQNECEGLTIQGKFYLRIDHLGEGANWRRSVGQEIY 342
            LMLHRRL+HDD RGVGEVLNETVC  N CEGLTIQG++++RID LGEGA WRR+VGQEIY
Sbjct: 805  LMLHRRLIHDDKRGVGEVLNETVCFSNGCEGLTIQGRYFVRIDPLGEGAKWRRTVGQEIY 864

Query: 343  SPLLLAFTEQDGDNWMNSHVSTFSGIDSFYNLPSNIAIITLQ----------------TG 386
            SP+LLAF EQDG NWMNSH+ TFSGID  Y+LP+N A++TLQ                TG
Sbjct: 865  SPILLAFAEQDGSNWMNSHIPTFSGIDPSYSLPNNTALLTLQELENGKVLLRLAHLYETG 924

Query: 387  EDKDYSVLTSVELKKLFPNKKISKVTEMNLSANQERATMEKKRLAWKVEGSAEEETKVVR 446
            EDKDYSV+ SVELKKLFPNKKI+KVTE++LSANQERA MEKKRL WKV GS EEE KVVR
Sbjct: 925  EDKDYSVMASVELKKLFPNKKIAKVTELSLSANQERAEMEKKRLVWKVAGSPEEENKVVR 984

Query: 447  GGPVDPATLVVELAPMEIRTFFIDFDRIKII 477
            GGPVDP+TLVVEL PMEIRTF IDF+ +++ 
Sbjct: 985  GGPVDPSTLVVELGPMEIRTFSIDFNYLQMF 1015

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|118486277|gb|ABK94980.1| unknown [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224065294|ref|XP_002301760.1| predicted protein [Populus trichocarpa] gi|222843486|gb|EEE81033.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|296082270|emb|CBI21275.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359488551|ref|XP_002276199.2| PREDICTED: lysosomal alpha-mannosidase-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|357508427|ref|XP_003624502.1| Lysosomal alpha-mannosidase [Medicago truncatula] gi|355499517|gb|AES80720.1| Lysosomal alpha-mannosidase [Medicago truncatula] Back     alignment and taxonomy information
>gi|356570259|ref|XP_003553307.1| PREDICTED: lysosomal alpha-mannosidase-like [Glycine max] Back     alignment and taxonomy information
>gi|359488553|ref|XP_002276092.2| PREDICTED: lysosomal alpha-mannosidase-like [Vitis vinifera] gi|296082271|emb|CBI21276.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224131400|ref|XP_002321075.1| predicted protein [Populus trichocarpa] gi|222861848|gb|EEE99390.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|440546588|gb|AGC10269.1| alpha-mannosidase [Prunus persica] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query483
TAIR|locus:20908171019 AT3G26720 [Arabidopsis thalian 0.492 0.233 0.648 1.9e-136
TAIR|locus:21591431024 AT5G13980 [Arabidopsis thalian 0.440 0.208 0.637 8.2e-120
TAIR|locus:21568571047 AT5G66150 [Arabidopsis thalian 0.494 0.228 0.542 1.9e-106
ZFIN|ZDB-GENE-050327-52982 man2b1 "mannosidase, alpha, cl 0.449 0.220 0.350 1e-41
UNIPROTKB|G5E9281010 MAN2B1 "Mannosidase, alpha, cl 0.453 0.216 0.351 3.2e-38
UNIPROTKB|O007541011 MAN2B1 "Lysosomal alpha-mannos 0.453 0.216 0.351 3.2e-38
UNIPROTKB|F1PKB21007 MAN2B1 "Uncharacterized protei 0.455 0.218 0.346 4.8e-37
RGD|30391009 Man2b1 "mannosidase, alpha, cl 0.447 0.214 0.328 1.7e-35
UNIPROTKB|F1MMX7999 MAN2B1 "Lysosomal alpha-mannos 0.453 0.219 0.339 1.8e-34
UNIPROTKB|Q29451999 MAN2B1 "Lysosomal alpha-mannos 0.453 0.219 0.339 1.8e-34
TAIR|locus:2090817 AT3G26720 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 839 (300.4 bits), Expect = 1.9e-136, Sum P(2) = 1.9e-136
 Identities = 166/256 (64%), Positives = 199/256 (77%)

Query:   224 WISQIRDFRTDWDLQVNQLVAGNYYPVNLGIYVQDDNAELSLLVDRSVGGSSLVDGQIEL 283
             +I +IRDFRTDWDLQV Q VAGNYYP+NLGIY+QD  +ELS+LVDR+VGGSSL +GQIEL
Sbjct:   742 FIKRIRDFRTDWDLQVYQPVAGNYYPLNLGIYMQDKTSELSVLVDRAVGGSSLENGQIEL 801

Query:   284 MLHRRLLHDDVRGVGEVLNETVCVQNECEGLTIQGKFYLRIDHLGEGANWRRSVGQEIYS 343
             MLHRR+ HDD+RGVGE+LNETVC+   C+GLTIQGKFY++ID  G+GA WRR+ GQEIYS
Sbjct:   802 MLHRRMQHDDIRGVGEILNETVCLPEGCKGLTIQGKFYVQIDKPGDGAKWRRTFGQEIYS 861

Query:   344 PLLLAFTEQDGDNWMNSHVSTFSGIDSFYNLPSNIAIITLQ----------------TGE 387
             PLL+AFTEQ+GD+W+NSH +TFS  +  Y+LP N+A++TLQ                 GE
Sbjct:   862 PLLIAFTEQEGDSWINSHKTTFSAFEPSYSLPKNVALLTLQELENGEVLLRLAHLFEVGE 921

Query:   388 DKDYSVLTSVELKKLFPNKKISKVTEMNLSANQERATMEKKRLAWKVEGSAEEETKVVRG 447
             D +YSV+  VELKKLF NKKI +V E +LS NQE+A MEK+RL WKVEGSA EE K  RG
Sbjct:   922 DSEYSVMAKVELKKLFHNKKIREVKETSLSGNQEKAEMEKRRLIWKVEGSAGEEVK--RG 979

Query:   448 GPVDPATLVVELAPME 463
               VD   LVVEL PME
Sbjct:   980 EAVDAEKLVVELVPME 995
GO:0003824 "catalytic activity" evidence=IEA
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA
GO:0004559 "alpha-mannosidase activity" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0006013 "mannose metabolic process" evidence=IEA
GO:0008270 "zinc ion binding" evidence=IEA
GO:0009507 "chloroplast" evidence=ISM
GO:0015923 "mannosidase activity" evidence=IEA
GO:0030246 "carbohydrate binding" evidence=IEA
GO:0005773 "vacuole" evidence=IDA
GO:0005774 "vacuolar membrane" evidence=IDA
GO:0009505 "plant-type cell wall" evidence=IDA
GO:0005829 "cytosol" evidence=RCA
GO:0007155 "cell adhesion" evidence=RCA
GO:0010048 "vernalization response" evidence=RCA
GO:0010090 "trichome morphogenesis" evidence=RCA
GO:0045010 "actin nucleation" evidence=RCA
GO:0048765 "root hair cell differentiation" evidence=RCA
GO:0071555 "cell wall organization" evidence=RCA
TAIR|locus:2159143 AT5G13980 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2156857 AT5G66150 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-050327-52 man2b1 "mannosidase, alpha, class 2B, member 1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|G5E928 MAN2B1 "Mannosidase, alpha, class 2B, member 1, isoform CRA_a" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|O00754 MAN2B1 "Lysosomal alpha-mannosidase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1PKB2 MAN2B1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
RGD|3039 Man2b1 "mannosidase, alpha, class 2B, member 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1MMX7 MAN2B1 "Lysosomal alpha-mannosidase D peptide" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|Q29451 MAN2B1 "Lysosomal alpha-mannosidase" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query483
pfam07748379 pfam07748, Glyco_hydro_38C, Glycosyl hydrolases fa 2e-22
PLN027011050 PLN02701, PLN02701, alpha-mannosidase 3e-16
>gnl|CDD|219551 pfam07748, Glyco_hydro_38C, Glycosyl hydrolases family 38 C-terminal domain Back     alignment and domain information 
 Score = 98.2 bits (245), Expect = 2e-22
 Identities = 78/406 (19%), Positives = 116/406 (28%), Gaps = 122/406 (30%)

Query: 129 TSNSIEVGQGNLRLLYSADEGKLTHYVNNRNKVT--ASAGQSYSYY-------------S 173
           T  S+ +  G L++ +    G L    +  N     A  G  +  Y              
Sbjct: 29  TDESVILENGFLKVEFDPT-GLLKSIYDKENGREVLAGVGNQFQLYEDKPLYWDAWDIDK 87

Query: 174 GNDGTDKDPQASGAYVFRPNDTFSINSESQVQLTIVRGPLLDEVHQQLSPWISQ-IR--- 229
             +    + Q SGAY+F PN               +R  +  EVHQ  S WISQ IR   
Sbjct: 88  DYEEKPLEVQDSGAYLFLPNGP-------------LRAVVRVEVHQYGSSWISQVIRLYA 134

Query: 230 -----DFRTDWDLQV-----------------------------------NQLVAGNYYP 249
                +F T  D                                      N      YY 
Sbjct: 135 GKPRIEFETTVDWPERHKELKVRFPTDINSDKAFYEDQNGVIERKLPTHPNTPWEAAYYE 194

Query: 250 VNLGIYVQDDNAE--LSLLVDRSVGGSSLVDGQIELMLHR-----RLLHDDVRGVGEVLN 302
           V    ++ D  A   +S+L D   G SSL DGQ+EL L R         DD R +     
Sbjct: 195 VPSHRFIDDSEASYGVSVLNDSKYGVSSLADGQLELSLLRAPTYPDPSADDGRHLFTY-- 252

Query: 303 ETVCVQNECEGLTIQGKFYLRIDHLGEGANWRRSVGQEIYSPLLLAFTEQDGDNWMNSHV 362
                      L   G  ++    +            E+ +PLL+          + +  
Sbjct: 253 ----------ALYPHGGSWVSAGVVKAAY--------ELNAPLLVWLLPSVSGLELPTPE 294

Query: 363 STFSGIDSFYNLPSNIAIITLQTGEDKDYSVLTSVELKKLFPNKKISKVTEMNLSANQER 422
              S +         + +  ++  ED +  ++                    +     E 
Sbjct: 295 LPLS-VHL-----LTLILDAIKLAEDGESGLVL------RRYE---------HDCERGED 333

Query: 423 ATMEKKRLAWKVE-GSAEEETKVVRGGPVDPATLVVELAPMEIRTF 467
                     +V      E    V         + V L PMEIRTF
Sbjct: 334 GNGSGPVAGVEVNLTDLLEGLLDVVDLKETSNRVEVTLKPMEIRTF 379

Glycosyl hydrolases are key enzymes of carbohydrate metabolism. Length = 379
>gnl|CDD|178304 PLN02701, PLN02701, alpha-mannosidase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 483
KOG1959996 consensus Glycosyl hydrolase, family 38 - alpha-ma 100.0
PLN027011050 alpha-mannosidase 100.0
KOG19581129 consensus Glycosyl hydrolase, family 38 - alpha-ma 100.0
PF07748457 Glyco_hydro_38C: Glycosyl hydrolases family 38 C-t 100.0
PRK09819875 alpha-mannosidase; Provisional 99.79
KOG43421078 consensus Alpha-mannosidase [Carbohydrate transpor 94.41
>KOG1959 consensus Glycosyl hydrolase, family 38 - alpha-mannosidase [Carbohydrate transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=1.6e-91  Score=731.75  Aligned_cols=436  Identities=44%  Similarity=0.688  Sum_probs=362.9

Q ss_pred             cceEEEEeCCCceeeeeEEEEEecCCcEEEECCCCCeEEEEEEecchhhhhhhccceecccCCCCCCCceEEEEEEEecC
Q 011547           19 VARFSLFDDLFRITCGFLKLLQVSSEKVIVKDSGGRTVESQLLPLSNATLRIRNRYVKAYLGKAPSETLKYWLAFSASVP   98 (483)
Q Consensus        19 ~~~vvvfN~L~~~r~~~~V~v~V~~~~~~V~D~~G~~V~~QI~p~~~~~~~~~~~~~~~~~g~~~~~~~~~eL~F~a~vP   98 (483)
                      +-.++|||||+|.++++ |||||+.++++|.|++|++|++||+|+......+.-          .....+|+|+|.|+||
T Consensus       481 ~~~v~~YNpLa~~~t~~-VRiPV~~~~~~V~D~~G~~v~Sqivp~~~~~~al~~----------~~~~~~~eLvf~asvp  549 (996)
T KOG1959|consen  481 NFIVTLYNPLAHTVTQY-VRIPVKEENYRVTDEKGRTVPSQIVPVPWQVLALES----------RNNDTKHELVFKASVP  549 (996)
T ss_pred             cEEEEEEcCCcceeeeE-EEEeccCCCeEEECCCCCCcccceeccchhhhhhhc----------cccCCCceEEEEEEec
Confidence            34689999999999999 999999999999999999999999999877655532          2245689999999999


Q ss_pred             CCeEEEEEEEecCCCCCCcceeeeeeccCCCCCceEEccceEEEEEeCCCCeEEEEEeccCcceeeEEEEEEEEecCCCC
Q 011547           99 PLGFSTYTVSIAKPTGPSSTISMVYTSEDSTSNSIEVGQGNLRLLYSADEGKLTHYVNNRNKVTASAGQSYSYYSGNDGT  178 (483)
Q Consensus        99 pLG~~tY~V~~~~~~~~~~~~s~~~~~~~~~~~~~~IeN~~l~v~fd~~tG~L~si~~k~~g~~~~~~~~f~~Y~~~~G~  178 (483)
                      |+||++|.|++..+....+ .+..............|+|+++++.||.+||+|+++....+|.+..|.|+|++|..+.|+
T Consensus       550 plg~aty~i~k~~~~~~~~-~~~~~~i~~~~~n~~~V~n~~~kl~fd~~tG~l~~v~~n~t~~t~~V~Q~f~~Y~~~~g~  628 (996)
T KOG1959|consen  550 PLGIATYFIKKVASTERGS-ASHVRNIKKRESNATEVGNSHLKLVFDNDTGLLKTVEMNQTGVTENVDQEFGYYKGYRGD  628 (996)
T ss_pred             CccceEEEEeecCcccccc-cccccccccccCcceEeccceEEEEEcCCCCceEEEEecccCcceeeeeeeEEEEeecCC
Confidence            9999999999755433210 000000111222348899999999999999999999988899999999999999998886


Q ss_pred             CCCCCCCCcEEEccCCCeeeecCC-CeEEEEEEcCceEEEEEEeeceEEE------------------------------
Q 011547          179 DKDPQASGAYVFRPNDTFSINSES-QVQLTIVRGPLLDEVHQQLSPWISQ------------------------------  227 (483)
Q Consensus       179 ~~~~~~sGAYiF~P~~~~~~~~~~-~~~i~v~~G~l~~ev~~~~~~~i~~------------------------------  227 (483)
                      + +.|+||||+||| +..+++... ...++++.|+|+.||||+|+.||+|                              
T Consensus       629 n-~~q~SgAYiFRp-~~~~~~~~~~~vel~vv~G~LV~EVhQ~f~~wiSQviRvy~g~~~~E~Ew~VGpIp~~d~~gkEv  706 (996)
T KOG1959|consen  629 N-DKQASGAYIFRP-GQADIPIVSDQVELTVVDGPLVKEVHQQFNPWISQVIRVYEGKNHVEFEWLVGPIPIDDGIGKEV  706 (996)
T ss_pred             c-CCccCcceEecC-CCCCccccccceEEEEecCchHHHHHHHHHHHHhheeEecCCCcceEEEEEecceecCCCccceE
Confidence            4 459999999999 554444333 5899999999999999999999887                              


Q ss_pred             --------------------------eeccccccccccccccccceEeecceEEEEeCceeEEEEeecccccccccCceE
Q 011547          228 --------------------------IRDFRTDWDLQVNQLVAGNYYPVNLGIYVQDDNAELSLLVDRSVGGSSLVDGQI  281 (483)
Q Consensus       228 --------------------------~r~~r~~~~~~~~~pv~~NyYPv~s~~~i~D~~~rltvltdrs~G~sSl~~G~l  281 (483)
                                                +||+|++|.++.++|||||||||++.|||||+++||+||+||||||||+.||+|
T Consensus       707 Vtr~~t~i~S~g~fYTDSNGRe~~kR~~d~r~~~~~~~~epiAGNYYPvt~~i~lqD~~~rl~vL~DRAqGgsSl~dG~l  786 (996)
T KOG1959|consen  707 VTRFSTEISSNGVFYTDSNGREMIKRVRDKREDFVLDVNEPIAGNYYPVTSRIYLQDSKKRLSVLNDRAQGGSSLKDGQL  786 (996)
T ss_pred             EEEeccccccCceEEecCcHHHHHHHHhcccCCCccccCccccccccccceeeEEecCCceEEEEeecccCCccccCCeE
Confidence                                      678999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEEeeeccCccCcccccccceeccccccCeEEEeEEEEEeccCCCcc-cccccchhhhccCceEEeeccCCCccccc
Q 011547          282 ELMLHRRLLHDDVRGVGEVLNETVCVQNECEGLTIQGKFYLRIDHLGEGA-NWRRSVGQEIYSPLLLAFTEQDGDNWMNS  360 (483)
Q Consensus       282 E~MlhRRl~~DD~rGvge~l~e~~~~~~~~~gl~v~~~~~l~l~~~~~~~-~~~r~~~~~~~~p~~~~~~~~~~~~~~~~  360 (483)
                      |+||||||+.||+|||||+|||+.++   ..||+++|+|++.|+...+.+ ..+|..+++++.|.+.+|+......+.+.
T Consensus       787 ElMLHRRl~~DD~~Gv~EaLnEt~~~---~~gL~~rGk~~~~l~~~~d~a~~~~r~~~~ei~~P~~~~f~~~~~~~~~~~  863 (996)
T KOG1959|consen  787 ELMLHRRLLNDDGRGVGEALNETVYG---HAGLIARGKLYVLLDKAGDGATGWRRLAEQEIHLPLWKFFSKPEGGEALNS  863 (996)
T ss_pred             EEEeeehhhcccccccchhccccccc---ccceEEeeeEEEEEecccccchhhhhhhhhhcccHHHHHhhcCCCccchhh
Confidence            99999999999999999999999984   389999999999999887776 66777789999999999987655444433


Q ss_pred             ccccccCCCcCCCCCCceEEEEeee----------------CCCCCCceeeEeeccccCCCCccceEEEeccccccchhh
Q 011547          361 HVSTFSGIDSFYNLPSNIAIITLQT----------------GEDKDYSVLTSVELKKLFPNKKISKVTEMNLSANQERAT  424 (483)
Q Consensus       361 ~~~~~s~l~~~~~lP~~vhlltl~~----------------~~d~~~s~~~~v~l~~lf~~~~i~~i~EtsLt~~~~~~~  424 (483)
                      .....+.++....||.+||||||++                |||+.++++++|||++||..+.+..|+||||+||+++++
T Consensus       864 ~s~~~~~f~~~~~lP~~vhLlTLe~~~~~~vLlRleh~~e~gED~~~s~vvsfnl~~lf~~~~i~~i~EttL~gN~~ls~  943 (996)
T KOG1959|consen  864 LSIPGSAFSGSYDLPQSVHLLTLEEWSKDEVLLRLEHLYEVGEDSELSQVVSFNLRKLFSALDIVEIRETTLDGNQPLSD  943 (996)
T ss_pred             cCCCccccccccCCCcceeeeecccCCCCceEeeehhhhhcccccccCcceEEEhHHhhcccCeeEEEEeeccCccChhh
Confidence            2222222332357999999999998                899999999999999999999999999999999999999


Q ss_pred             hhccceeeeec--CCcc--ccceeccCCCCCC-CCceEEecCceeEEEEEEEee
Q 011547          425 MEKKRLAWKVE--GSAE--EETKVVRGGPVDP-ATLVVELAPMEIRTFFIDFDR  473 (483)
Q Consensus       425 ~~~~r~~w~~~--~~~~--~~~~~~~~~~~~~-~~~~v~L~PmeIrTf~i~~~~  473 (483)
                      |  +|++|+..  |..+  ......+..+.++ +.+.|+|.|||||||+|++++
T Consensus       944 m--kr~k~~~~~~G~~~~~~~~~~s~~~p~~~~~~~~vtL~PmeIRTfii~~~~  995 (996)
T KOG1959|consen  944 M--KRFKFHWDVSGEKPSGVEYSTSRHKPLDKTSEFIVTLHPMEIRTFIIKFQQ  995 (996)
T ss_pred             h--hhhccccCCCCCCCCCccccccCCCCCCcccceEEEEeccEEEEEEEEEec
Confidence            9  77776654  3222  2223345555664 688999999999999998764

>PLN02701 alpha-mannosidase Back     alignment and domain information
>KOG1958 consensus Glycosyl hydrolase, family 38 - alpha-mannosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF07748 Glyco_hydro_38C: Glycosyl hydrolases family 38 C-terminal domain; InterPro: IPR011682 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PRK09819 alpha-mannosidase; Provisional Back     alignment and domain information
>KOG4342 consensus Alpha-mannosidase [Carbohydrate transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query483
1o7d_D282 The Structure Of The Bovine Lysosomal A-Mannosidase 9e-26
1hxk_A1015 Golgi Alpha-Mannosidase Ii In Complex With Deoxyman 5e-13
1ps3_A1045 Golgi Alpha-mannosidase Ii In Complex With Kifunens 5e-13
3cv5_A1045 Golgi Mannosidase Ii D204a Catalytic Nucleophile Mu 6e-13
1qwu_A1045 Golgi Alpha-Mannosidase Ii D341n Mutant Complex Wit 6e-13
3dx3_A1045 Golgi Alpha-Mannosidase Ii In Complex With Mannosta 6e-13
1qwn_A1045 Golgi Alpha-Mannosidase Ii Covalent Intermediate Co 7e-13
1hty_A1015 Golgi Alpha-Mannosidase Ii Length = 1015 4e-11
>pdb|1O7D|D Chain D, The Structure Of The Bovine Lysosomal A-Mannosidase Suggests A Novel Mechanism For Low Ph Activation Length = 282 Back     alignment and structure 
Iteration: 1

 Score =  114 bits (286), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 73/205 (35%), Positives = 96/205 (46%), Gaps = 62/205 (30%)
Query: 177 GTDKDPQASGAYVFRPNDTFSINSESQVQLTIVRGPLLDEVHQQLSPWISQI-------R 229
           G +   QASGAY+FRPN    +      Q  +V+  L+ EVHQ  S W SQ+       R
Sbjct: 47  GNNLSSQASGAYIFRPNQNKPLFVSHWAQTHLVKASLVQEVHQNFSAWCSQVVRLYPRQR 106
Query: 230 DFRTDWDL-----------------------------------------------QVNQL 242
               +W +                                               ++NQ 
Sbjct: 107 HLELEWTVGPIPVGDGWGKEVISRFDTALATRGLFYTDSNGREILERRRNYRPTWKLNQT 166
Query: 243 --VAGNYYPVNLGIYVQDDNAELSLLVDRSVGGSSLVDGQIELMLHRRLLHDDVRGVGEV 300
             VAGNYYPVN  IY+ D N +L++L DRS GGSSL DG +ELM+HRRLL DD RGVGE 
Sbjct: 167 EPVAGNYYPVNSRIYITDGNMQLTVLTDRSQGGSSLRDGSLELMVHRRLLKDDARGVGEP 226
Query: 301 LNETVCVQNECEGLTIQGKFYLRID 325
           LN+      E  GL ++G+  + +D
Sbjct: 227 LNK------EGSGLWVRGRHLVLLD 245
>pdb|1HXK|A Chain A, Golgi Alpha-Mannosidase Ii In Complex With Deoxymannojirimicin Length = 1015 Back     alignment and structure
>pdb|1PS3|A Chain A, Golgi Alpha-mannosidase Ii In Complex With Kifunensine Length = 1045 Back     alignment and structure
>pdb|3CV5|A Chain A, Golgi Mannosidase Ii D204a Catalytic Nucleophile Mutant Complex With 3alpha,6alpha-Mannopentaose Length = 1045 Back     alignment and structure
>pdb|1QWU|A Chain A, Golgi Alpha-Mannosidase Ii D341n Mutant Complex With 5-F-Guloside Length = 1045 Back     alignment and structure
>pdb|3DX3|A Chain A, Golgi Alpha-Mannosidase Ii In Complex With Mannostatin Analog (1r,2r, 3s,4r,5r)-5-Aminocyclopentane-1,2,3,4-Tetraol Length = 1045 Back     alignment and structure
>pdb|1QWN|A Chain A, Golgi Alpha-Mannosidase Ii Covalent Intermediate Complex With 5- Fluoro-Gulosyl-Fluoride Length = 1045 Back     alignment and structure
>pdb|1HTY|A Chain A, Golgi Alpha-Mannosidase Ii Length = 1015 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query483
3bvx_A1045 Alpha-mannosidase 2; family 38 glycoysl hydrolase, 9e-77
1o7d_D282 Lysosomal alpha-mannosidase; hydrolase, glycosyl h 1e-63
1o7d_E126 Lysosomal alpha-mannosidase; hydrolase, glycosyl h 1e-24
1o7d_C159 Lysosomal alpha-mannosidase; hydrolase, glycosyl h 9e-12
3lvt_A899 Glycosyl hydrolase, family 38; PSI, MCSG, structur 1e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-04
3k1f_M197 Transcription initiation factor IIB; RNA polymeras 3e-05
>3bvx_A Alpha-mannosidase 2; family 38 glycoysl hydrolase, glycosidase, golgi apparatus, membrane, signal-anchor, transmembrane; HET: WZ5; 1.10A {Drosophila melanogaster} SCOP: a.8.3.1 b.30.5.6 c.6.2.1 PDB: 3bud_A 3buq_A* 3bvt_A* 3bui_A* 3bvv_A* 3bvw_A* 3bvu_A* 3cv5_A* 3czn_A* 3czs_A* 2ow6_A* 1r33_A* 1r34_A* 1tqs_A* 1tqt_A* 1tqu_A* 1tqv_A* 1tqw_A* 2alw_A* 2f18_A* ... Length = 1045 Back     alignment and structure
 Score =  259 bits (661), Expect = 9e-77
 Identities = 87/516 (16%), Positives = 159/516 (30%), Gaps = 124/516 (24%)

Query: 39   LQVSSEKVIVKDSGGRTVESQLLPLSNATLRIRNRYVKAYLGKAPSETLKYWLAFSASVP 98
              VSS  V V D     VE+Q+ P+ +       + +            KY + F A VP
Sbjct: 571  FYVSSPFVSVTDLANNPVEAQVSPVWSWHHDTLTKTIHPQGSTT-----KYRIIFKARVP 625

Query: 99   PLGFSTYTVSIAKPTGPSSTISMVYTS----------------EDSTSNSIEVGQGNLRL 142
            P+G +TY ++I+      ++ +                     +      I +  GN   
Sbjct: 626  PMGLATYVLTISDSKPEHTSYASNLLLRKNPTSLPLGQYPEDVKFGDPREISLRVGNGPT 685

Query: 143  LYSADEGKLTHYVNNRNKVTASAGQSYSYYSGNDGTDKDPQASGAYVFRPNDTFSINSES 202
            L  +++G L      ++         +  Y            SGAY+F PN   S     
Sbjct: 686  LAFSEQGLLKSIQLTQDSPHVPVHFKFLKYGVRS----HGDRSGAYLFLPNGPASPVELG 741

Query: 203  QVQLTIVRGPLLDEVHQQLSPWISQIR--------DFRTDWDLQVN-------------- 240
            Q  + + +G L   V   L   + Q              D     N              
Sbjct: 742  QPVVLVTKGKLESSVSVGLPSVVHQTIMRGGAPEIRNLVDIGSLDNTEIVMRLETHIDSG 801

Query: 241  --------------------QLVAGNYYPVNLGIYVQDDNAELSLLVDRSVGGSSLVDGQ 280
                                  +  NYYP+  G++++D N  L+LL  + +GGSSL  G+
Sbjct: 802  DIFYTDLNGLQFIKRRRLDKLPLQANYYPIPSGMFIEDANTRLTLLTGQPLGGSSLASGE 861

Query: 281  IELMLHRRLLHDDVRGVGEVLNETVCVQNECEGL---TIQGKFYLRIDHLGEGANWRRSV 337
            +E+M  RRL  DD RG+G+ + +   V +    +           ++   G   +     
Sbjct: 862  LEIMQDRRLASDDERGLGQGVLDNKPVLHIYRLVLEKVNNCVRPSKLHPAGYLTSAAHKA 921

Query: 338  GQEIYSPLLLAFTEQDGDNWMNSHVSTFSGIDSFYNLPSNIAIITLQTGEDK-------- 389
             Q +  PL      +  + W+ +    F G     +   ++ +  ++             
Sbjct: 922  SQSLLDPLDKFIFAE--NEWIGAQ-GQFGGDHP--SAREDLDVSVMRRLTKSSAKTQRVG 976

Query: 390  -------------DYSVLTSVELKKLFPNKKISKVTEMNLSANQERATMEKKRLAWKVEG 436
                                +++  L PN  +++     L+  Q    ++          
Sbjct: 977  YVLHRTNLMQCGTPEEHTQKLDVCHLLPN--VARCERTTLTFLQNLEHLDGM-------- 1026

Query: 437  SAEEETKVVRGGPVDPATLVVELAPMEIRTFFIDFD 472
                              +  E+ PME   +     
Sbjct: 1027 ------------------VAPEVCPMETAAYVSSHS 1044
>1o7d_D Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: b.30.5.6 Length = 282 Back     alignment and structure
>1o7d_E Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: b.30.5.6 Length = 126 Back     alignment and structure
>1o7d_C Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: a.8.3.1 b.30.5.6 Length = 159 Back     alignment and structure
>3lvt_A Glycosyl hydrolase, family 38; PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.55A {Enterococcus faecalis} Length = 899 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3k1f_M Transcription initiation factor IIB; RNA polymerase II, TFIIB, transcription factor, DNA-binding, DNA-directed RNA polymerase; 4.30A {Saccharomyces cerevisiae} Length = 197 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query483
3bvx_A1045 Alpha-mannosidase 2; family 38 glycoysl hydrolase, 100.0
1o7d_D282 Lysosomal alpha-mannosidase; hydrolase, glycosyl h 100.0
2wyh_A923 Alpha-mannosidase; hydrolase, glycosidase, glycosi 100.0
3lvt_A899 Glycosyl hydrolase, family 38; PSI, MCSG, structur 99.95
1o7d_E126 Lysosomal alpha-mannosidase; hydrolase, glycosyl h 99.89
1o7d_C159 Lysosomal alpha-mannosidase; hydrolase, glycosyl h 99.54
>3bvx_A Alpha-mannosidase 2; family 38 glycoysl hydrolase, glycosidase, golgi apparatus, membrane, signal-anchor, transmembrane; HET: WZ5; 1.10A {Drosophila melanogaster} SCOP: a.8.3.1 b.30.5.6 c.6.2.1 PDB: 3bud_A 3buq_A* 3bvt_A* 3bui_A* 3bvv_A* 3bvw_A* 3bvu_A* 3cv5_A* 3czn_A* 3czs_A* 2ow6_A* 1r33_A* 1r34_A* 1tqs_A* 1tqt_A* 1tqu_A* 1tqv_A* 1tqw_A* 2alw_A* 2f18_A* ... Back     alignment and structure
Probab=100.00  E-value=1.5e-66  Score=592.76  Aligned_cols=399  Identities=21%  Similarity=0.350  Sum_probs=311.3

Q ss_pred             cceEEEEeCCCceeeeeEEEEEecCCcEEEECCCCCeEEEEEEecchhhhhhhccceecccCCCCCCCceEEEEEEEecC
Q 011547           19 VARFSLFDDLFRITCGFLKLLQVSSEKVIVKDSGGRTVESQLLPLSNATLRIRNRYVKAYLGKAPSETLKYWLAFSASVP   98 (483)
Q Consensus        19 ~~~vvvfN~L~~~r~~~~V~v~V~~~~~~V~D~~G~~V~~QI~p~~~~~~~~~~~~~~~~~g~~~~~~~~~eL~F~a~vP   98 (483)
                      +..++|||||+|.|+++ |+|+|..+.+.|+|++|++|++|++|++.....+.....     +.......|+|+|.|+||
T Consensus       552 ~~~vvvfN~L~~~r~~~-V~v~v~~~~~~V~D~~G~~v~~Qi~~~~~~~~~~~~~~~-----~~~~~~~~~~L~f~a~vP  625 (1045)
T 3bvx_A          552 SKHVVMHNTLPHWREQL-VDFYVSSPFVSVTDLANNPVEAQVSPVWSWHHDTLTKTI-----HPQGSTTKYRIIFKARVP  625 (1045)
T ss_dssp             EEEEEEEECSSSCEEEE-EEEEESCSCEEEEETTCCEECEEEEEEEEEEEETTTTEE-----EEEEEEEEEEEEEEEEEC
T ss_pred             CceEEEEcCCCcceeeE-EEEEeccCceEEEcCCCCEEeEEEeeccccccccccccc-----cccCCCCcEEEEEEeccC
Confidence            44799999999999999 999999999999999999999999998764322210000     000023568999999999


Q ss_pred             CCeEEEEEEEecCCCCCCcceee--eee-------c--cCCCCCceEEccceE------EEEEeCCCCeEEEEEeccCcc
Q 011547           99 PLGFSTYTVSIAKPTGPSSTISM--VYT-------S--EDSTSNSIEVGQGNL------RLLYSADEGKLTHYVNNRNKV  161 (483)
Q Consensus        99 pLG~~tY~V~~~~~~~~~~~~s~--~~~-------~--~~~~~~~~~IeN~~l------~v~fd~~tG~L~si~~k~~g~  161 (483)
                      ||||++|+|..+.........+.  ++.       .  .....+...|||++|      +|+||+ +|.|++|++|++|+
T Consensus       626 ~lG~~ty~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~leN~~~~~~~~~~v~fd~-~G~L~si~dk~~g~  704 (1045)
T 3bvx_A          626 PMGLATYVLTISDSKPEHTSYASNLLLRKNPTSLPLGQYPEDVKFGDPREISLRVGNGPTLAFSE-QGLLKSIQLTQDSP  704 (1045)
T ss_dssp             TTEEEEEEEEECSSCCTTEEECEEEEECSSCCCCCCTTCSSCCEEECCCCEEEECTTSCEEEECT-TSCEEEEECSTTSC
T ss_pred             CceeEEEEEEecCCccccccccceeecccccccccccccccCCCceeecccccccccccEEEECC-CCcEEEEEEcCCCe
Confidence            99999999987654322011111  110       0  001223578999999      999998 99999999999999


Q ss_pred             eeeEEEEEEEEecCCCCCCCCCCCCcEEEccCCC-eeeecCCCeEEEEEEcCceEEEEEEeeceEEE-ee----------
Q 011547          162 TASAGQSYSYYSGNDGTDKDPQASGAYVFRPNDT-FSINSESQVQLTIVRGPLLDEVHQQLSPWISQ-IR----------  229 (483)
Q Consensus       162 ~~~~~~~f~~Y~~~~G~~~~~~~sGAYiF~P~~~-~~~~~~~~~~i~v~~G~l~~ev~~~~~~~i~~-~r----------  229 (483)
                      ++.+.++|.+|.+..|.    +.||||+|+|++. .++.. ..+.+.+++|||+++|++.+ .|++| +|          
T Consensus       705 e~~~~~~f~~Y~~~~~~----~~sgaY~F~P~~~~~~~~~-~~~~~~v~~Gpl~~ev~~~~-~~i~q~irL~~~~ieie~  778 (1045)
T 3bvx_A          705 HVPVHFKFLKYGVRSHG----DRSGAYLFLPNGPASPVEL-GQPVVLVTKGKLESSVSVGL-PSVVHQTIMRGGAPEIRN  778 (1045)
T ss_dssp             CEEEEEEEEEECBCSSS----CCCCSSCCCBSSSCEECCC-CSCCEEEEECSSCEEEEEEE-TTEEEEEEESSSSCEEEE
T ss_pred             EEEEeeEEEEEecccCC----CCCcceEecCCCCCccccc-CCceEEEEeCCeEEEEEEEE-eeEEEEEEECCeeEEEEE
Confidence            99999999999875543    3699999999887 44433 35678899999999999988 56654 11          


Q ss_pred             --------------ccccc-------------cc-----cccccccccceEeecceEEEEeCceeEEEEeeccccccccc
Q 011547          230 --------------DFRTD-------------WD-----LQVNQLVAGNYYPVNLGIYVQDDNAELSLLVDRSVGGSSLV  277 (483)
Q Consensus       230 --------------~~r~~-------------~~-----~~~~~pv~~NyYPv~s~~~i~D~~~rltvltdrs~G~sSl~  277 (483)
                                    .|.++             ++     .+.++|++||||||+++|+|+|++.||+|++||||||||++
T Consensus       779 ~Vd~~~~~~~el~~rf~t~i~s~~~fyTD~nG~~~ikR~~~~~~p~~~NyYPv~s~~~i~D~~~~ltvl~drs~G~sSl~  858 (1045)
T 3bvx_A          779 LVDIGSLDNTEIVMRLETHIDSGDIFYTDLNGLQFIKRRRLDKLPLQANYYPIPSGMFIEDANTRLTLLTGQPLGGSSLA  858 (1045)
T ss_dssp             EECCTTCTTEEEEEEEEECCCCTTEEEEEETTTEEEEEECCTTSCGGGGCEEESSEEEEECSSEEEEEEESSCEEEECCS
T ss_pred             EEecCCCCCeEEEEEeecccCCCCeEEEecCCceeEEcCCCCCCCcccceEEeeeeEEEEcCCeeEEEEecCCccccccC
Confidence                          01110             11     12468999999999999999999999999999999999999


Q ss_pred             CceEEEEEEEeeeccCccCcccccccceeccccccCeEEEeEEEEEeccCCCcc------------cccccchhhhccCc
Q 011547          278 DGQIELMLHRRLLHDDVRGVGEVLNETVCVQNECEGLTIQGKFYLRIDHLGEGA------------NWRRSVGQEIYSPL  345 (483)
Q Consensus       278 ~G~lE~MlhRRl~~DD~rGvge~l~e~~~~~~~~~gl~v~~~~~l~l~~~~~~~------------~~~r~~~~~~~~p~  345 (483)
                      +|+|||||||||++||+|||||||+|+.         +++++|||+|++....+            ...|..++++.+|+
T Consensus       859 ~G~lElmlhRrl~~DD~rGvge~l~d~~---------~~~~~~~l~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~~p~  929 (1045)
T 3bvx_A          859 SGELEIMQDRRLASDDERGLGQGVLDNK---------PVLHIYRLVLEKVNNCVRPSKLHPAGYLTSAAHKASQSLLDPL  929 (1045)
T ss_dssp             TTEEEEEEEEEBCSCCSSSCCSCBCCCC---------CEEEEEEEEEEECTTSCCCCTTCSEECCCHHHHHHHHHHHSCC
T ss_pred             CCeEEEEEeeeeccCCcccccccccCCc---------eeeeEEEEEEecccccccccccccccccCHHHHHHHHHHhCCc
Confidence            9999999999999999999999999965         48899999999875433            13466778899999


Q ss_pred             eEEeeccCCCcccccccccccCCCcCCCCCCceEEEEeee------------------CCCCCC---ceeeEeeccccCC
Q 011547          346 LLAFTEQDGDNWMNSHVSTFSGIDSFYNLPSNIAIITLQT------------------GEDKDY---SVLTSVELKKLFP  404 (483)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~~s~l~~~~~lP~~vhlltl~~------------------~~d~~~---s~~~~v~l~~lf~  404 (483)
                      +++++...  .+. ....+|+++..  +||||||||||++                  +.||..   +.+++|||++||.
T Consensus       930 ~~~~~~~~--~~~-~~~~~~~~l~~--~lP~~vhlltL~~~~~~~~~~~~~ll~L~~~~~~~~~~~~s~~~~~~l~~lf~ 1004 (1045)
T 3bvx_A          930 DKFIFAEN--EWI-GAQGQFGGDHP--SAREDLDVSVMRRLTKSSAKTQRVGYVLHRTNLMQCGTPEEHTQKLDVCHLLP 1004 (1045)
T ss_dssp             EEEEECSS--CCT-TBCSEECTTSC--CCCTTEEEEEEEECSCTTCSEEEEEEEEEECCCCCCSCCCCCCCCCCGGGSSS
T ss_pred             ceeeccCc--ccc-cccccCCcccc--cCCCCEEEEEeEecCCCCccCceEEEEEeeeccccCcCcccCcccccHHHHhc
Confidence            99886532  222 24567888765  9999999999988                  134433   5788999999999


Q ss_pred             CCccceEEEeccccccchhhhhccceeeeecCCccccceeccCCCCCCCCceEEecCceeEEEEEEEe
Q 011547          405 NKKISKVTEMNLSANQERATMEKKRLAWKVEGSAEEETKVVRGGPVDPATLVVELAPMEIRTFFIDFD  472 (483)
Q Consensus       405 ~~~i~~i~EtsLt~~~~~~~~~~~r~~w~~~~~~~~~~~~~~~~~~~~~~~~v~L~PmeIrTf~i~~~  472 (483)
                      .  |.+++||||||+++++++.                          +.+.|+|+|||||||+|+++
T Consensus      1005 ~--i~~~~etsL~~~~~~~~~~--------------------------~~~~v~l~PmeirTf~i~~~ 1044 (1045)
T 3bvx_A         1005 N--VARCERTTLTFLQNLEHLD--------------------------GMVAPEVCPMETAAYVSSHS 1044 (1045)
T ss_dssp             S--EEEEEEECTTSCSEEEECG--------------------------GGCCCCCCTTCEEEEEEEEE
T ss_pred             C--cceEEEecccCCccccccC--------------------------CCcceEEcCceeEEEEEEee
Confidence            8  9999999999999886651                          13478999999999999986
>1o7d_D Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: b.30.5.6 Back     alignment and structure
>2wyh_A Alpha-mannosidase; hydrolase, glycosidase, glycoside hydrolase; 1.90A {Streptococcus pyogenes} PDB: 2wyi_A* Back     alignment and structure
>3lvt_A Glycosyl hydrolase, family 38; PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.55A {Enterococcus faecalis} Back     alignment and structure
>1o7d_E Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: b.30.5.6 Back     alignment and structure
>1o7d_C Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: a.8.3.1 b.30.5.6 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 483
d3bvua2522 b.30.5.6 (A:523-1044) Golgi alpha-mannosidase II { 3e-87
g1o7d.2490 b.30.5.6 (C:488-585,D:603-875,E:885-1007) Lysosoma 6e-78
>d3bvua2 b.30.5.6 (A:523-1044) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 522 Back     information, alignment and structure

class: All beta proteins
fold: Supersandwich
superfamily: Galactose mutarotase-like
family: alpha-mannosidase, C-terminal domain
domain: Golgi alpha-mannosidase II
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score =  275 bits (703), Expect = 3e-87
 Identities = 89/515 (17%), Positives = 161/515 (31%), Gaps = 124/515 (24%)

Query: 39  LQVSSEKVIVKDSGGRTVESQLLPLSNATLRIRNRYVKAYLGKAPSETLKYWLAFSASVP 98
             VSS  V V D     VE+Q+ P+ +       + +          T KY + F A VP
Sbjct: 49  FYVSSPFVSVTDLANNPVEAQVSPVWSWHHDTLTKTIHPQ-----GSTTKYRIIFKARVP 103

Query: 99  PLGFSTYTVSIAKPTGPSSTISMVYT----------------SEDSTSNSIEVGQGNLRL 142
           P+G +TY ++I+      ++ +                     +      I +  GN   
Sbjct: 104 PMGLATYVLTISDSKPEHTSYASNLLLRKNPTSLPLGQYPEDVKFGDPREISLRVGNGPT 163

Query: 143 LYSADEGKLTHYVNNRNKVTASAGQSYSYYSGNDGTDKDPQASGAYVFRPNDTFSINSES 202
           L  +++G L      ++         +  Y    G       SGAY+F PN   S     
Sbjct: 164 LAFSEQGLLKSIQLTQDSPHVPVHFKFLKY----GVRSHGDRSGAYLFLPNGPASPVELG 219

Query: 203 QVQLTIVRGPLLDEVHQQLSPWISQIR------DFRTDWDL------------------- 237
           Q  + + +G L   V   L   + Q        + R   D+                   
Sbjct: 220 QPVVLVTKGKLESSVSVGLPSVVHQTIMRGGAPEIRNLVDIGSLDNTEIVMRLETHIDSG 279

Query: 238 -----------------QVNQLVAGNYYPVNLGIYVQDDNAELSLLVDRSVGGSSLVDGQ 280
                                 +  NYYP+  G++++D N  L+LL  + +GGSSL  G+
Sbjct: 280 DIFYTDLNGLQFIKRRRLDKLPLQANYYPIPSGMFIEDANTRLTLLTGQPLGGSSLASGE 339

Query: 281 IELMLHRRLLHDDVRGVGEVLNETVCVQNECEGLTIQGKFYLRIDH---LGEGANWRRSV 337
           +E+M  RRL  DD RG+G+ + +   V +    +  +    +R       G   +     
Sbjct: 340 LEIMQDRRLASDDERGLGQGVLDNKPVLHIYRLVLEKVNNCVRPSKLHPAGYLTSAAHKA 399

Query: 338 GQEIYSPLLLAFTEQDGDNWMNSHVSTFSGIDSFYNLPSNIAIITLQT------------ 385
            Q +  PL      ++           F G     +   ++ +  ++             
Sbjct: 400 SQSLLDPLDKFIFAENEW---IGAQGQFGGD--HPSAREDLDVSVMRRLTKSSAKTQRVG 454

Query: 386 ---------GEDKDYSVLTSVELKKLFPNKKISKVTEMNLSANQERATMEKKRLAWKVEG 436
                               +++  L PN  +++     L+  Q    ++          
Sbjct: 455 YVLHRTNLMQCGTPEEHTQKLDVCHLLPN--VARCERTTLTFLQNLEHLDGM-------- 504

Query: 437 SAEEETKVVRGGPVDPATLVVELAPMEIRTFFIDF 471
                             +  E+ PME   +    
Sbjct: 505 ------------------VAPEVCPMETAAYVSSH 521

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query483
d3bvua2522 Golgi alpha-mannosidase II {Fruit fly (Drosophila 100.0
g1o7d.2490 Lysosomal alpha-mannosidase {Cow (Bos taurus) [Tax 100.0
>d3bvua2 b.30.5.6 (A:523-1044) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
class: All beta proteins
fold: Supersandwich
superfamily: Galactose mutarotase-like
family: alpha-mannosidase, C-terminal domain
domain: Golgi alpha-mannosidase II
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=100.00  E-value=6.4e-75  Score=613.53  Aligned_cols=402  Identities=21%  Similarity=0.343  Sum_probs=313.2

Q ss_pred             cceEEEEeCCCceeeeeEEEEEecCCcEEEECCCCCeEEEEEEecchhhhhhhccceecccCCCCCCCceEEEEEEEecC
Q 011547           19 VARFSLFDDLFRITCGFLKLLQVSSEKVIVKDSGGRTVESQLLPLSNATLRIRNRYVKAYLGKAPSETLKYWLAFSASVP   98 (483)
Q Consensus        19 ~~~vvvfN~L~~~r~~~~V~v~V~~~~~~V~D~~G~~V~~QI~p~~~~~~~~~~~~~~~~~g~~~~~~~~~eL~F~a~vP   98 (483)
                      ...|+|||||+|+|+++ |+|+|++++|+|+|++|++|++||+|+|.............     ..+..+|+|+|.|+||
T Consensus        30 ~~~VvvyNpL~~~r~ev-V~v~V~~~~v~V~D~~G~~V~sQi~pv~~~~~~~~~~~~~~-----~~~~~~yeL~F~A~vP  103 (522)
T d3bvua2          30 SKHVVMHNTLPHWREQL-VDFYVSSPFVSVTDLANNPVEAQVSPVWSWHHDTLTKTIHP-----QGSTTKYRIIFKARVP  103 (522)
T ss_dssp             EEEEEEEECSSSCEEEE-EEEEESCSCEEEEETTCCEECEEEEEEEEEEEETTTTEEEE-----EEEEEEEEEEEEEEEC
T ss_pred             CCEEEEECCCCCeeeeE-EEEEECCCCEEEEcCCcCEEEEEEcccccccccccceeecc-----cCCCceEEEEEEEEeC
Confidence            36699999999999999 99999999999999999999999999998653322111110     0134689999999999


Q ss_pred             CCeEEEEEEEecCCCCCCcceee-ee-e--------------ccCCCCCceEEccceEEEEEeCCCCeEEEEEeccCcce
Q 011547           99 PLGFSTYTVSIAKPTGPSSTISM-VY-T--------------SEDSTSNSIEVGQGNLRLLYSADEGKLTHYVNNRNKVT  162 (483)
Q Consensus        99 pLG~~tY~V~~~~~~~~~~~~s~-~~-~--------------~~~~~~~~~~IeN~~l~v~fd~~tG~L~si~~k~~g~~  162 (483)
                      ||||++|+|+............. .. .              .......++.++|+++++.||.++|+|++|++++++.+
T Consensus       104 pLG~~tY~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~len~~~~~~~d~~tG~L~sI~~~~~~~~  183 (522)
T d3bvua2         104 PMGLATYVLTISDSKPEHTSYASNLLLRKNPTSLPLGQYPEDVKFGDPREISLRVGNGPTLAFSEQGLLKSIQLTQDSPH  183 (522)
T ss_dssp             TTEEEEEEEEECSSCCTTEEECEEEEECSSCCCCCCTTCSSCCEEECCCCEEEECTTSCEEEECTTSCEEEEECSTTSCC
T ss_pred             CceeEEEEEEEcCCCcccccccceeeeecCcccccccccccccccCCcceEEEecCceEEEEeCCCCCEEEEEEcCCCeE
Confidence            99999999988765433211111 00 0              00012346899999999999999999999999999999


Q ss_pred             eeEEEEEEEEecCCCCCCCCCCCCcEEEccCCCeeeecCCCeEEEEEEcCceEEEEEEeeceEEEeec------------
Q 011547          163 ASAGQSYSYYSGNDGTDKDPQASGAYVFRPNDTFSINSESQVQLTIVRGPLLDEVHQQLSPWISQIRD------------  230 (483)
Q Consensus       163 ~~~~~~f~~Y~~~~G~~~~~~~sGAYiF~P~~~~~~~~~~~~~i~v~~G~l~~ev~~~~~~~i~~~r~------------  230 (483)
                      ..+.++|++|....+    ++.||||+|+|++...........+.+++|++++||++.++.|+++++.            
T Consensus       184 ~~~~~~f~~y~~~~~----~~~SgAYiF~P~~~~~~~~~~~~~~~v~~G~l~~ev~~~~~~~~~~v~l~~~~~~ie~~~~  259 (522)
T d3bvua2         184 VPVHFKFLKYGVRSH----GDRSGAYLFLPNGPASPVELGQPVVLVTKGKLESSVSVGLPSVVHQTIMRGGAPEIRNLVD  259 (522)
T ss_dssp             EEEEEEEEEECBCSS----SCCCCSSCCCBSSSCEECCCCSCCEEEEECSSCEEEEEEETTEEEEEEESSSSCEEEEEEC
T ss_pred             EEEeeEEEEEeeecC----CCcccceEEccCCCccccccCCcEEEEEEeeEEEEEEEEEeeEEEEEEecCCceEEEEEEe
Confidence            999999999976432    3579999999998743333345678899999999999999999987221            


Q ss_pred             ------------cccc-------c----c-------cccccccccceEeecceEEEEeCceeEEEEeecccccccccCce
Q 011547          231 ------------FRTD-------W----D-------LQVNQLVAGNYYPVNLGIYVQDDNAELSLLVDRSVGGSSLVDGQ  280 (483)
Q Consensus       231 ------------~r~~-------~----~-------~~~~~pv~~NyYPv~s~~~i~D~~~rltvltdrs~G~sSl~~G~  280 (483)
                                  +.++       |    +       .+.++|++||||||+++|||+|++.||+|+|||||||+|+++|+
T Consensus       260 v~~~~~kEiv~r~~t~i~s~~~fyTDsnG~~~~kR~~~~~~pv~~NyYPv~s~~~i~D~~~~lsll~dra~G~sSl~dG~  339 (522)
T d3bvua2         260 IGSLDNTEIVMRLETHIDSGDIFYTDLNGLQFIKRRRLDKLPLQANYYPIPSGMFIEDANTRLTLLTGQPLGGSSLASGE  339 (522)
T ss_dssp             CTTCTTEEEEEEEEECCCCTTEEEEEETTTEEEEEECCTTSCGGGGCEEESSEEEEECSSEEEEEEESSCEEEECCSTTE
T ss_pred             cCCCCceEEEEEeecccccCCEEEEcCcccceeEeeccCCCcccccccceeeEEEEecCCeeEEEEecCCCCcccccCCE
Confidence                        1111       0    1       12568999999999999999999999999999999999999999


Q ss_pred             EEEEEEEeeeccCccCcccccccceeccccccCeEEEeEEEEEeccCCCc------------ccccccchhhhccCceEE
Q 011547          281 IELMLHRRLLHDDVRGVGEVLNETVCVQNECEGLTIQGKFYLRIDHLGEG------------ANWRRSVGQEIYSPLLLA  348 (483)
Q Consensus       281 lE~MlhRRl~~DD~rGvge~l~e~~~~~~~~~gl~v~~~~~l~l~~~~~~------------~~~~r~~~~~~~~p~~~~  348 (483)
                      ||+||||||++||+|||||+|+|+.+         +.++|+++++.....            +..+|..++.+++|++++
T Consensus       340 lElml~Rrl~~dD~rGvge~l~d~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~~P~~~f  410 (522)
T d3bvua2         340 LEIMQDRRLASDDERGLGQGVLDNKP---------VLHIYRLVLEKVNNCVRPSKLHPAGYLTSAAHKASQSLLDPLDKF  410 (522)
T ss_dssp             EEEEEEEEBCSCCSSSCCSCBCCCCC---------EEEEEEEEEEECTTSBCCCTTCSEECCCHHHHHHHHHHHSCCEEE
T ss_pred             EEEEEEehhccCCccccccCcccccc---------ccceEEEEEeccccccccccccccccchHHHHHhhhhhcCcceee
Confidence            99999999999999999999999876         457888888765321            122344557888998887


Q ss_pred             eeccCCCcccccccccccCCCcCCCCCCceEEEEeee------------------CCCC---CCceeeEeeccccCCCCc
Q 011547          349 FTEQDGDNWMNSHVSTFSGIDSFYNLPSNIAIITLQT------------------GEDK---DYSVLTSVELKKLFPNKK  407 (483)
Q Consensus       349 ~~~~~~~~~~~~~~~~~s~l~~~~~lP~~vhlltl~~------------------~~d~---~~s~~~~v~l~~lf~~~~  407 (483)
                      +....  .+.. ....|+++..  +||||+||+||++                  +++|   ..+.++++||.++|.  +
T Consensus       411 ~~~~~--~~~~-~~~~~~~l~~--~lP~nvhl~tL~~~~~~~~~~~~~ll~L~~~~~~~~~~~~~~~~~~~L~~lf~--~  483 (522)
T d3bvua2         411 IFAEN--EWIG-AQGQFGGDHP--SAREDLDVSVMRRLTKSSAKTQRVGYVLHRTNLMQCGTPEEHTQKLDVCHLLP--N  483 (522)
T ss_dssp             EECSS--CCTT-BCSEECTTSC--CCCTTEEEEEEEECSCTTCSSEEEEEEEEECCCCBCSCCCCCCCCCCGGGSSS--S
T ss_pred             eecCC--Cccc-ccccccccCC--CCCCcEEEEeeeEcCcCCCCCCcEEEEEEEecccccCccccceeEEEhHHhcC--C
Confidence            65432  2332 3566788765  8999999999998                  2222   346688999999998  4


Q ss_pred             cceEEEeccccccchhhhhccceeeeecCCccccceeccCCCCCCCCceEEecCceeEEEEEEEe
Q 011547          408 ISKVTEMNLSANQERATMEKKRLAWKVEGSAEEETKVVRGGPVDPATLVVELAPMEIRTFFIDFD  472 (483)
Q Consensus       408 i~~i~EtsLt~~~~~~~~~~~r~~w~~~~~~~~~~~~~~~~~~~~~~~~v~L~PmeIrTf~i~~~  472 (483)
                      |.+++||+||+++.++.+..                          ...|+|+|||||||+|+|.
T Consensus       484 i~~i~etsLt~~~~~~~~~~--------------------------~~~v~l~PMEIrTf~i~~~  522 (522)
T d3bvua2         484 VARCERTTLTFLQNLEHLDG--------------------------MVAPEVCPMETAAYVSSHS  522 (522)
T ss_dssp             EEEEEEECTTSCSEEEECGG--------------------------GCCCCCCTTCEEEEEEEEC
T ss_pred             hheEEEccccccccccccCc--------------------------CCCceECCeEeEEEEEEcC
Confidence            78999999999998776510                          1267899999999999984