Citrus Sinensis ID: 011569


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480---
MVLHVSLENAIKKNTMKLSSPSCFSHEAQELLSNIALLETTVSKLEQEMVSLHFQLSQERNERRLAEYRLRHSSSPTLSGCFPDITETLYADDSVVLSHEKKISTKTGFKSSQPVEFRKVPTGMSSKGLWNNPNQLSEEMVRCMKNIFMSLADSALPAKSSALESQCSTLSPRGHLSNSSWWSSSDCSMIQSPQIDMQNNSGVLASENVFDPYRVRGKLSWADIGNYGLAMEVSWMSVGKQQLEYASGALKTFRTLVEQLAKVNPVHLSSNEKLAFWINLYNALIMHAYLAYGVPRNDLKLFSLMQKAAYTVGGHSYNAAAIEYMILKMKPPLHRPQIALLLALQKLKVTEEQRKCAIDEYEPLVAFALSCGMYSSPAISIYTAKNVREELQEAQRDFIRASVGFSSKGKLLVPKMLHCFCKGSVDDANLAVWISHYLPPLQAAFVEQCISQRRQSFLGSRNCGILPFDSRFRYLFLPDKIPH
cHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHcccccccccccccccccccccccccHHHccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEccccccHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHcccEEEEEccEEEEHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEcccccccccccEEcHHHHHHHHHHHHHHHHHHccccccccEEEcccHHHHHHccccccHHHHHHHHHHccHHHHHHHHHHHHHccccccccccEEEEccccccccccccccccc
cHHHHHHHHHHHHcccHcccccHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccHcccccccccHHHHccccccccccccccccccHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEccccHHHHHHHHHHHHHHHHHHHHHcccHHHccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHEEccccEEcHHHHHHHHHcccccccccHHHHHHccccccccHHHHHccccccccEEEEEEEccccccccEEEEcHHHHHHHHHHHHHHHHHHcccEccccEEEHHHHHHHHHHHccccHHHHHHHHHHccHHHHHHHHHHHHcccccccccEEEEEEcccccEEEEEcHccccc
MVLHVSLENAIkkntmklsspscfsHEAQELLSNIALLETTVSKLEQEMVSLHFQLSQERNERRLAEYRLrhsssptlsgcfpditetlyaddsvvlshekkistktgfkssqpvefrkvptgmsskglwnnpnqLSEEMVRCMKNIFMSLadsalpakssalesqcstlsprghlsnsswwsssdcsmiqspqidmqnnsgvlasenvfdpyrvrgklswadignyGLAMEVSWMSVGKQQLEYASGALKTFRTLVEQLAKvnpvhlssneKLAFWINLYNALIMHAYLaygvprndlKLFSLMQKAAYTVGGHSYNAAAIEYMILkmkpplhrPQIALLLALQKLKVTEEQRKCAIDEYEPLVAFALScgmysspaiSIYTAKNVREELQEAQRDFIRASvgfsskgkllvpKMLHCfckgsvddaNLAVWIShylpplqaAFVEQCISQRRQsflgsrncgilpfdsrfrylflpdkiph
MVLHVSLENaikkntmklsspSCFSHEAQELLSNIALLETTVSKLEQEMVSLHFQLSQERNERRLAEYRlrhsssptlsgcfPDITETLYADDSVVLSHEKkistktgfkssqpvefrkvptgmsskglwnnpNQLSEEMVRCMKNIFMSLADSALPAKSSALESQCSTLSPRGHLSNSSWWSSSDCSMIQSPQIDMQNNSGVLASENVFDPYRVRGKLSWADIGNYGLAMEVSWMSVGKQQLEYASGALKTFRTLVEQLAKVNPVHLSSNEKLAFWINLYNALIMHAYLAYGVPRNDLKLFSLMQKAAYTVGGHSYNAAAIEYMILKMKPPLHRPQIALLLALQKLKVTEEQRKCAIDEYEPLVAFALSCGMYSSPAISIYTAKNVREELQEAQRDFIRASVGFSSKGKLLVPKMLHCFCKGSVDDANLAVWISHYLPPLQAAFVEQCISQRRQSFLGSRNCGILPFDSRFRYLFLPDKIPH
MVLHVSLENAIKKNTMKLSSPSCFSHEAQELLSNIALLETTVSKLEQEMVSLHFQLSQERNERRLAEYRLRHSSSPTLSGCFPDITETLYADDSVVLSHEKKISTKTGFKSSQPVEFRKVPTGMSSKGLWNNPNQLSEEMVRCMKNIFMSLADSALPAKSSALESQCSTLSPRGHLsnsswwsssdcsmiqsPQIDMQNNSGVLASENVFDPYRVRGKLSWADIGNYGLAMEVSWMSVGKQQLEYASGALKTFRTLVEQLAKVNPVHLSSNEKLAFWINLYNALIMHAYLAYGVPRNDLKLFSLMQKAAYTVGGHSYNAAAIEYMILKMKPPLHRPqialllalqklkVTEEQRKCAIDEYEPLVAFALSCGMYSSPAISIYTAKNVREELQEAQRDFIRASVGFSSKGKLLVPKMLHCFCKGSVDDANLAVWISHYLPPLQAAFVEQCISQRRQSFLGSRNCGILPFDSRFRYLFLPDKIPH
*****************************ELLSNIALLETTVSKLEQEMVSLHF***********************LSGCFPDITETLYADDSVVL******************************************MVRCMKNIFMSL***************************************************VLASENVFDPYRVRGKLSWADIGNYGLAMEVSWMSVGKQQLEYASGALKTFRTLVEQLAKVNPVHLSSNEKLAFWINLYNALIMHAYLAYGVPRNDLKLFSLMQKAAYTVGGHSYNAAAIEYMILKMKPPLHRPQIALLLALQKLKVTEEQRKCAIDEYEPLVAFALSCGMYSSPAISIYTAKNVREELQEAQRDFIRASVGFSSKGKLLVPKMLHCFCKGSVDDANLAVWISHYLPPLQAAFVEQCISQRRQSFLGSRNCGILPFDSRFRYLFLP*****
MVLHVSLENA******************QELLSNIALLETTVSKLEQEMVSLHFQ**********************************************************************************EEMVRCMKNIFM*****************************************************VLASENVFDPYRVRGKLSWADIGNYGLAMEVSWMSVGKQQLEYASGALKTFRTLVEQLAKVNPVHLSSNEKLAFWINLYNALIMHAYLAYGVPRNDLKLFSLMQKAAYTVGGHSYNAAAIEYMILKMKPPLHRPQIALLLALQKLKVTEEQRKCAIDEYEPLVAFALSCGMYSSPAISIYTAKNVREELQEAQRDFIRASVGFSSKGKLLVPKMLHCFCKGSVDDANLAVWISHYLPPLQA******************NCGILPFDSRFRYLFLPD*I**
MVLHVSLENAIKKNTMKLSSPSCFSHEAQELLSNIALLETTVSKLEQEMVSLHFQLSQERNERRLAEYRLRHSSSPTLSGCFPDITETLYADDSVVLSHEKKISTKTGFKSSQPVEFRKVPTGMSSKGLWNNPNQLSEEMVRCMKNIFMSLADSAL******************************CSMIQSPQIDMQNNSGVLASENVFDPYRVRGKLSWADIGNYGLAMEVSWMSVGKQQLEYASGALKTFRTLVEQLAKVNPVHLSSNEKLAFWINLYNALIMHAYLAYGVPRNDLKLFSLMQKAAYTVGGHSYNAAAIEYMILKMKPPLHRPQIALLLALQKLKVTEEQRKCAIDEYEPLVAFALSCGMYSSPAISIYTAKNVREELQEAQRDFIRASVGFSSKGKLLVPKMLHCFCKGSVDDANLAVWISHYLPPLQAAFVEQCISQRRQSFLGSRNCGILPFDSRFRYLFLPDKIPH
**L*VSLENAIKKNTMKLSSPSCFSHEAQELLSNIALLETTVSKLEQEMVSLHFQLSQERNERRLA*************************************************************GLWNNPNQLSEEMVRCMKNIFMSLAD******************************************************NVFDPYRVRGKLSWADIGNYGLAMEVSWMSVGKQQLEYASGALKTFRTLVEQLAKVNPVHLSSNEKLAFWINLYNALIMHAYLAYGVPRNDLKLFSLMQKAAYTVGGHSYNAAAIEYMILKMKPPLHRPQIALLLALQKLKVTEEQRKCAIDEYEPLVAFALSCGMYSSPAISIYTAKNVREELQEAQRDFIRASVGFSSKGKLLVPKMLHCFCKGSVDDANLAVWISHYLPPLQAAFVEQCISQRRQSFLGSRNCGILPFDSRFRYLFLPDKIP*
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MVLHVSLENAIKKNTMKLSSPSCFSHExxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxRRLAEYRLRHSSSPTLSGCFPDITETLYADDSVVLSHEKKISTKTGFKSSQPVEFRKVPTGMSSKGLWNNPNQLSEEMVRCMKNIFMSLADSALPAKSSALESQCSTLSPRGHLSNSSWWSSSDCSMIQSPQIDMQNNSGVLASENVFDPYRVRGKLSWADIGNYGLAMEVSWMSVGKQQLEYASGALKTFRTLVEQLAKVNPVHLSSNEKLAFWINLYNALIMHAYLAYGVPRNDLKLFSLMQKAAYTVGGHSYNAAAIEYMILKMKPPLHRPQIALLLALQKLKVTEEQRKCAIDEYEPLVAFALSCGMYSSPAISIYTAKNVREELQEAQRDFIRASVGFSSKGKLLVPKMLHCFCKGSVDDANLAVWISHYLPPLQAAFVEQCISQRRQSFLGSRNCGILPFDSRFRYLFLPDKIPH
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query483
225443476566 PREDICTED: uncharacterized protein LOC10 0.962 0.821 0.771 0.0
297735678 629 unnamed protein product [Vitis vinifera] 0.995 0.764 0.717 0.0
224095086445 predicted protein [Populus trichocarpa] 0.881 0.957 0.729 0.0
22331037553 uncharacterized protein [Arabidopsis tha 0.987 0.862 0.666 0.0
297834110582 hypothetical protein ARALYDRAFT_318072 [ 0.983 0.816 0.665 0.0
42572403582 uncharacterized protein [Arabidopsis tha 0.987 0.819 0.666 0.0
449445933563 PREDICTED: uncharacterized protein LOC10 0.981 0.841 0.698 0.0
312281603 590 unnamed protein product [Thellungiella h 0.975 0.798 0.664 0.0
115469812538 Os06g0704100 [Oryza sativa Japonica Grou 0.975 0.875 0.608 1e-164
413934832 617 hypothetical protein ZEAMMB73_649167 [Ze 0.973 0.761 0.603 1e-163
>gi|225443476|ref|XP_002270034.1| PREDICTED: uncharacterized protein LOC100241082 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  712 bits (1838), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/485 (77%), Positives = 414/485 (85%), Gaps = 20/485 (4%)

Query: 1   MVLHVSLENAIKKNTMKLSSPSCFSHEAQELLSNIALLETTVSKLEQEMVSLHFQLSQER 60
           M LH  LENAI+KNT +LSS SC  H AQ LL+NI++LE TVSKLEQEMVSLHF+LSQER
Sbjct: 96  MELHAILENAIEKNTGELSSSSCLPHNAQVLLANISVLELTVSKLEQEMVSLHFKLSQER 155

Query: 61  NERRLAEYRLRHSSSPTLSGCFPDITETLYADDSVVLSHEKKISTKTGFKSSQPVEFRKV 120
           NERRLAEYR+RHSSS +LS  FP                E  IS KT  K  QPV+F K+
Sbjct: 156 NERRLAEYRMRHSSSFSLSPVFP----------------EDIISIKTDTKCYQPVDFGKL 199

Query: 121 PTGMSSKGLWNNPNQLSEEMVRCMKNIFMSLADSALPAKSSALESQCSTLSPRGHLSNSS 180
             GM  KGLW +PNQLSEEMVRCMKNIF+SLA+SALP+K SA+ESQCS+LSPRGHLSNSS
Sbjct: 200 TKGMPPKGLWEHPNQLSEEMVRCMKNIFISLAESALPSKPSAVESQCSSLSPRGHLSNSS 259

Query: 181 WWSSSDCSM----IQSPQIDMQNNSGVLASENVFDPYRVRGKLSWADIGNYGLAMEVSWM 236
            WSSS+ S+    +QSPQ+D++ +S VLA+ENV DPY+VRGKLSWADIG YGLA EVSWM
Sbjct: 260 LWSSSERSIISSWVQSPQVDVKGHSEVLATENVCDPYKVRGKLSWADIGTYGLATEVSWM 319

Query: 237 SVGKQQLEYASGALKTFRTLVEQLAKVNPVHLSSNEKLAFWINLYNALIMHAYLAYGVPR 296
           SVGK+QLEYASGAL+ FRTLVEQLAKVNP+ L+ NEKLAFWINLYNALIMHAYLAYGVPR
Sbjct: 320 SVGKKQLEYASGALRRFRTLVEQLAKVNPIQLNCNEKLAFWINLYNALIMHAYLAYGVPR 379

Query: 297 NDLKLFSLMQKAAYTVGGHSYNAAAIEYMILKMKPPLHRPQIALLLALQKLKVTEEQRKC 356
           +DLKLFSLMQKAAYTVGGHS++AAAIEY+ILKMKPP+HRPQIALLLAL KLKV+EE RK 
Sbjct: 380 SDLKLFSLMQKAAYTVGGHSFSAAAIEYVILKMKPPVHRPQIALLLALHKLKVSEELRKS 439

Query: 357 AIDEYEPLVAFALSCGMYSSPAISIYTAKNVREELQEAQRDFIRASVGFSSKGKLLVPKM 416
           AID  EPLVAFALSCGMYSSP+I IYTAK VREELQEAQRDFIRASVG SSKG+LLVPKM
Sbjct: 440 AIDTCEPLVAFALSCGMYSSPSIRIYTAKKVREELQEAQRDFIRASVGLSSKGRLLVPKM 499

Query: 417 LHCFCKGSVDDANLAVWISHYLPPLQAAFVEQCISQRRQSFLGSRNCGILPFDSRFRYLF 476
           LHCF KG VDDA LAVWISHYLPP QAAFVEQCIS+RRQS LGSRNCGILPFDS FRYLF
Sbjct: 500 LHCFAKGFVDDAKLAVWISHYLPPHQAAFVEQCISRRRQSLLGSRNCGILPFDSHFRYLF 559

Query: 477 LPDKI 481
           LPD++
Sbjct: 560 LPDQL 564




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297735678|emb|CBI18365.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224095086|ref|XP_002310343.1| predicted protein [Populus trichocarpa] gi|222853246|gb|EEE90793.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|22331037|ref|NP_187906.2| uncharacterized protein [Arabidopsis thaliana] gi|15795132|dbj|BAB02510.1| unnamed protein product [Arabidopsis thaliana] gi|20260518|gb|AAM13157.1| unknown protein [Arabidopsis thaliana] gi|31711976|gb|AAP68344.1| At3g13000 [Arabidopsis thaliana] gi|332641754|gb|AEE75275.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297834110|ref|XP_002884937.1| hypothetical protein ARALYDRAFT_318072 [Arabidopsis lyrata subsp. lyrata] gi|297330777|gb|EFH61196.1| hypothetical protein ARALYDRAFT_318072 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|42572403|ref|NP_974297.1| uncharacterized protein [Arabidopsis thaliana] gi|62321660|dbj|BAD95282.1| hypothetical protein [Arabidopsis thaliana] gi|222424421|dbj|BAH20166.1| AT3G13000 [Arabidopsis thaliana] gi|332641753|gb|AEE75274.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|449445933|ref|XP_004140726.1| PREDICTED: uncharacterized protein LOC101204212 [Cucumis sativus] Back     alignment and taxonomy information
>gi|312281603|dbj|BAJ33667.1| unnamed protein product [Thellungiella halophila] Back     alignment and taxonomy information
>gi|115469812|ref|NP_001058505.1| Os06g0704100 [Oryza sativa Japonica Group] gi|53791925|dbj|BAD54047.1| ternary complex factor MIP1-like [Oryza sativa Japonica Group] gi|113596545|dbj|BAF20419.1| Os06g0704100 [Oryza sativa Japonica Group] gi|215737317|dbj|BAG96246.1| unnamed protein product [Oryza sativa Japonica Group] gi|222636188|gb|EEE66320.1| hypothetical protein OsJ_22557 [Oryza sativa Japonica Group] Back     alignment and taxonomy information
>gi|413934832|gb|AFW69383.1| hypothetical protein ZEAMMB73_649167 [Zea mays] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query483
TAIR|locus:2089220582 AT3G13000 [Arabidopsis thalian 0.946 0.785 0.592 4.3e-141
TAIR|locus:2015666529 AT1G16750 "AT1G16750" [Arabido 0.939 0.858 0.561 3.4e-125
TAIR|locus:2171499618 AT5G47380 "AT5G47380" [Arabido 0.515 0.402 0.379 3.3e-54
TAIR|locus:2165487540 AT5G42690 [Arabidopsis thalian 0.538 0.481 0.358 3.4e-49
TAIR|locus:2115164610 AT4G37080 "AT4G37080" [Arabido 0.536 0.424 0.361 7.4e-46
TAIR|locus:2049008707 AT2G23700 "AT2G23700" [Arabido 0.509 0.347 0.333 2.8e-41
TAIR|locus:2009854445 AT1G43020 "AT1G43020" [Arabido 0.498 0.541 0.329 1.7e-38
TAIR|locus:2043235498 AT2G39690 "AT2G39690" [Arabido 0.530 0.514 0.362 7.3e-38
TAIR|locus:2199567505 AT1G21060 "AT1G21060" [Arabido 0.469 0.449 0.350 4.8e-36
TAIR|locus:2011661527 AT1G76620 "AT1G76620" [Arabido 0.457 0.419 0.344 5.9e-36
TAIR|locus:2089220 AT3G13000 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1380 (490.8 bits), Expect = 4.3e-141, P = 4.3e-141
 Identities = 287/484 (59%), Positives = 344/484 (71%)

Query:     2 VLHVSLENAIKKNTMKLSSPSCFSHEAQELLSNIALLETTVSKLEQEMVSLHFQLSQERN 61
             ++ ++ + + ++N  +L+     +H A  L S+ +L       L Q    LH       +
Sbjct:   115 MMSLNFQLSQERNERRLAEYQ-LTHSASPLNSSSSL-----RYLNQSDSELHQSAEDSPS 168

Query:    62 ERRLAEYRLRHS-SSPTLSGCFPDITETLYADDSVVLSHEKKISTKTGFKSSQPVEFRKV 120
             + ++  Y+   S SSP  S     + +TL   +  +   EK++  KT          RK+
Sbjct:   169 QDQIVHYQESSSESSPAES----TVEQTLDPSNDFL---EKRLMRKTNA--------RKL 213

Query:   121 PTGMSSKGLWNNPNQLSEEMVRCMKNIFMSLADSALPAKSSALESQCSTLSPRGHLXXXX 180
             P GM  K LW+ PN LSEEMVRCMKNIFMSLAD    +K+S+ ES  S +SPRGHL    
Sbjct:   214 PRGMPPKYLWDQPNLLSEEMVRCMKNIFMSLADPTATSKASSNESHLSPVSPRGHLSSSA 273

Query:   181 X-----XXXXXXXXXXXPQIDMQNNSGVLASENVFDPYRVRGKLSWADIGNYGLAMEVSW 235
                              PQID+QNN+ VLA+ +VFDPYRVRGKLSWA+IGNY LA EVSW
Sbjct:   274 SWWPSTERSMISSWVQSPQIDIQNNANVLATGDVFDPYRVRGKLSWAEIGNYSLASEVSW 333

Query:   236 MSVGKQQLEYASGALKTFRTLVEQLAKVNPVHLSSNEKLAFWINLYNALIMHAYLAYGVP 295
             MSVGK+QLEYASGALK FRTLVEQLA+VNP+HLS NEKLAFWINLYNALIMHAYLAYGVP
Sbjct:   334 MSVGKKQLEYASGALKKFRTLVEQLARVNPIHLSCNEKLAFWINLYNALIMHAYLAYGVP 393

Query:   296 RNDLKLFSLMQKAAYTVGGHSYNAAAIEYMILKMKPPLHRPXXXXXXXXXXXXVTEEQRK 355
             ++DLKLFSLMQKAAYTVGGHSY AA +EY+ILKMKPP+HRP            V+EEQR+
Sbjct:   394 KSDLKLFSLMQKAAYTVGGHSYTAATMEYVILKMKPPMHRPQIALLLAIHKMKVSEEQRR 453

Query:   356 CAIDEYEPLVAFALSCGMYSSPAISIYTAKNVREELQEAQRDFIRASVGFSSKGKLLVPK 415
              +ID +EPL+ FALSCGMYSSPA+ IY+AK V+EE+ EAQRDFI+ASVG SSKGKLL+PK
Sbjct:   454 ASIDTHEPLLGFALSCGMYSSPAVRIYSAKGVKEEMLEAQRDFIQASVGLSSKGKLLLPK 513

Query:   416 MLHCFCKGSVDDANLAVWISHYLPPLQAAFVEQCISQRRQSFLGSRNCGILPFDSRFRYL 475
             MLHC+ K  V+D+NL VWIS YLPP QAAFVEQCISQRRQS L SRNCGILPFDSRFRYL
Sbjct:   514 MLHCYAKSLVEDSNLGVWISRYLPPHQAAFVEQCISQRRQSLLASRNCGILPFDSRFRYL 573

Query:   476 FLPD 479
             FLPD
Sbjct:   574 FLPD 577


GO:0005634 "nucleus" evidence=ISM
GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS
GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS
GO:0005773 "vacuole" evidence=IDA
TAIR|locus:2015666 AT1G16750 "AT1G16750" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2171499 AT5G47380 "AT5G47380" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2165487 AT5G42690 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2115164 AT4G37080 "AT4G37080" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2049008 AT2G23700 "AT2G23700" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2009854 AT1G43020 "AT1G43020" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2043235 AT2G39690 "AT2G39690" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2199567 AT1G21060 "AT1G21060" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2011661 AT1G76620 "AT1G76620" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query483
pfam04784112 pfam04784, DUF547, Protein of unknown function, DU 3e-38
pfam1438988 pfam14389, Lzipper-MIP1, Leucine-zipper of ternary 4e-13
>gnl|CDD|218263 pfam04784, DUF547, Protein of unknown function, DUF547 Back     alignment and domain information
 Score =  134 bits (341), Expect = 3e-38
 Identities = 50/141 (35%), Positives = 69/141 (48%), Gaps = 32/141 (22%)

Query: 262 KVNPVHLSSNEKLAFWINLYNALIMHAYLAYGVPRNDLKL-FSLMQKAAYTVGGHSYNAA 320
           +V+P  LS  E+LAFWINLYNAL +H  L      +   + F    KA YTVGG + +  
Sbjct: 1   RVDPESLSREEQLAFWINLYNALTIHLILDNYPVPSIRDIGFGPWNKAFYTVGGQALSLD 60

Query: 321 AIEYMILKMKPPLHRPQIALLLALQKLKVTEEQRKCAIDEYEPLVAFALSCGMYSSPAI- 379
            IE+ IL+   P                             +P + FAL+CG  S P + 
Sbjct: 61  DIEHGILRGNWP-----------------------------DPRIHFALNCGSISCPPLR 91

Query: 380 -SIYTAKNVREELQEAQRDFI 399
              YTA+N+ E+L+EA R+FI
Sbjct: 92  PEAYTAENLDEQLEEAAREFI 112


Family of uncharacterized proteins from C. elegans and A. thaliana. Length = 112

>gnl|CDD|206557 pfam14389, Lzipper-MIP1, Leucine-zipper of ternary complex factor MIP1 Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 483
PF04784117 DUF547: Protein of unknown function, DUF547; Inter 100.0
PF1438988 Lzipper-MIP1: Leucine-zipper of ternary complex fa 99.65
>PF04784 DUF547: Protein of unknown function, DUF547; InterPro: IPR006869 This is a conserved region found in uncharacterised proteins from Caenorhabditis elegans and Arabidopsis thaliana (Mouse-ear cress) Back     alignment and domain information
Probab=100.00  E-value=2.1e-39  Score=286.40  Aligned_cols=112  Identities=46%  Similarity=0.756  Sum_probs=105.3

Q ss_pred             ccCCCCCCcchhHHHHHHHHHHHHHHHHHHhCCCCCchhh---hccccceeEEECCeEeeHHHHHHHhcccCCCCCChhH
Q 011569          262 KVNPVHLSSNEKLAFWINLYNALIMHAYLAYGVPRNDLKL---FSLMQKAAYTVGGHSYNAAAIEYMILKMKPPLHRPQI  338 (483)
Q Consensus       262 ~Vd~~~Ls~~EkLAFWINiYNalvmHa~L~~G~P~s~~k~---~~~~~k~~y~VGG~~~Sl~dIEh~ILR~~~p~~rp~~  338 (483)
                      +||++.|+++||+|||||+||+|+||+++++|+|.+..++   ..+|.+..|+|||+.+||+||||+|||++.+      
T Consensus         1 ~v~~~~l~~~e~lAFwIN~yNal~~h~~l~~~~~~s~~~~~~~~~~~~~~~y~Igg~~~SL~dIe~~ILR~~~~------   74 (117)
T PF04784_consen    1 RVDLSSLSREEKLAFWINLYNALVLHAILENGPPKSILDRKLGGSFFSKVRYNIGGQRFSLDDIEHGILRGNRP------   74 (117)
T ss_pred             CcChHHCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHhhcccccccceEEEECCEEecHHHHHHhhccCCCC------
Confidence            5899999999999999999999999999999999888776   6899999999999999999999999998632      


Q ss_pred             HHHHHhhcccchhHHhhhccCCCCCeEEEEeccCCCCCCCcc--eeccchHHHHHHHHHHHHH
Q 011569          339 ALLLALQKLKVTEEQRKCAIDEYEPLVAFALSCGMYSSPAIS--IYTAKNVREELQEAQRDFI  399 (483)
Q Consensus       339 ~ll~~~~~~k~~d~r~~~~L~~~dPrvhFAL~cGs~S~P~lr--vYta~~v~~qLe~a~~efl  399 (483)
                                          .++||||||||+||++|||+||  +|||++|++||++|+++||
T Consensus        75 --------------------~~~DprihFaL~cgs~s~P~lr~~~yt~~~l~~qL~~a~~~fi  117 (117)
T PF04784_consen   75 --------------------PWPDPRIHFALNCGSKSCPPLRREAYTAENLDEQLEEAAREFI  117 (117)
T ss_pred             --------------------CCCCCceeeeeecCCCCChhhhhhccCHHHHHHHHHHHHHhhC
Confidence                                1689999999999999999999  9999999999999999996



>PF14389 Lzipper-MIP1: Leucine-zipper of ternary complex factor MIP1 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query483
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 45.6 bits (107), Expect = 3e-05
 Identities = 61/475 (12%), Positives = 135/475 (28%), Gaps = 147/475 (30%)

Query: 18  LSSPSCFSHEAQELLS------NIALLETTVSKLEQEMVSLHFQLSQERNER--RLAEYR 69
           ++   C S++ Q  +       N+    +  + LE  +  L +Q+      R    +  +
Sbjct: 166 VALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEM-LQKLLYQIDPNWTSRSDHSSNIK 224

Query: 70  LR-HSSSPTLSGCFPDITETLYAD-----DSV----------------VLSHEKKISTKT 107
           LR HS    L           Y +      +V                + +  K+++   
Sbjct: 225 LRIHSIQAELRRLL---KSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFL 281

Query: 108 GFKSSQPVEFRKVPTGMS--------SKGLWNNPNQLSEEMVRC--------------MK 145
              ++  +        ++         K L   P  L  E++                  
Sbjct: 282 SAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGL 341

Query: 146 NIFMSLADSALPAKSSALESQCSTLSP---RGHLSNSS----------------WWSSSD 186
             + +         ++ +ES  + L P   R      S                W+    
Sbjct: 342 ATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIK 401

Query: 187 CSMIQSPQIDMQ--NNSGVLASENVFDPYRVRGKLSWADIGNYGLAMEVSWMSVGKQQLE 244
                   + +   +   ++  +       +             + +E+      +  L 
Sbjct: 402 ----SDVMVVVNKLHKYSLVEKQPKESTISI-----------PSIYLELKVKLENEYALH 446

Query: 245 YASGALKTFRTLVEQLAKVNPVHLSSNEKLAFWINLYNALIMHAYLAY---GVPRNDL-K 300
                    R++V+      P    S++ +  +++ Y     ++++ +    +   +   
Sbjct: 447 ---------RSIVDHYNI--PKTFDSDDLIPPYLDQY----FYSHIGHHLKNIEHPERMT 491

Query: 301 LFS--------LMQKAAYTVGGHSYNAAA---------IEYM--ILKMKPPLHRPQIALL 341
           LF         L QK  +     ++NA+            Y   I    P   R   A+L
Sbjct: 492 LFRMVFLDFRFLEQKIRHD--STAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAIL 549

Query: 342 LALQKLKVTEEQRKCAIDEYEPLVAFALSCGMYSSPAISIYTAKNVREELQEAQR 396
             L K+   EE       +Y  L+  AL      +   +I+      E  ++ QR
Sbjct: 550 DFLPKI---EE--NLICSKYTDLLRIAL-----MAEDEAIF-----EEAHKQVQR 589


>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00