Citrus Sinensis ID: 011596
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 482 | 2.2.26 [Sep-21-2011] | |||||||
| Q9ZQB9 | 699 | Probable xyloglucan glyco | yes | no | 0.962 | 0.663 | 0.769 | 0.0 | |
| Q6L538 | 688 | Probable xyloglucan glyco | yes | no | 0.943 | 0.661 | 0.68 | 0.0 | |
| Q9SB75 | 692 | Probable xyloglucan glyco | no | no | 0.933 | 0.650 | 0.630 | 1e-179 | |
| Q9SJA2 | 690 | Probable xyloglucan glyco | no | no | 0.931 | 0.650 | 0.636 | 1e-177 | |
| Q8LIY0 | 690 | Probable xyloglucan glyco | yes | no | 0.952 | 0.665 | 0.674 | 1e-176 | |
| Q84Z01 | 686 | Putative xyloglucan glyco | yes | no | 0.923 | 0.648 | 0.689 | 1e-176 | |
| A2YHR9 | 686 | Putative xyloglucan glyco | N/A | no | 0.923 | 0.648 | 0.689 | 1e-176 | |
| Q6AU53 | 595 | Probable xyloglucan glyco | yes | no | 0.767 | 0.621 | 0.766 | 1e-168 | |
| Q7PC69 | 745 | Probable xyloglucan glyco | no | no | 0.950 | 0.614 | 0.581 | 1e-166 | |
| Q9SRT3 | 682 | Probable xyloglucan glyco | no | no | 0.919 | 0.649 | 0.618 | 1e-164 |
| >sp|Q9ZQB9|CSLCC_ARATH Probable xyloglucan glycosyltransferase 12 OS=Arabidopsis thaliana GN=CSLC12 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 781 bits (2016), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/481 (76%), Positives = 416/481 (86%), Gaps = 17/481 (3%)
Query: 1 MENPN-WSMVELEAPSEEDFLRAEHHTAAPANKTRNRNAKQLTWVLLLKAHKAAGCLTSI 59
MENPN WSMVELE+PS +DFL H K+RN+NA+QLTWVLLLKAH+AAGCLTS+
Sbjct: 26 MENPNNWSMVELESPSHDDFLVRTHE------KSRNKNARQLTWVLLLKAHRAAGCLTSL 79
Query: 60 ASAFFSLGSLVRRRVAAGRTDQPPTSADTHEIQKL----RTRFFYSCIKLFLWLSVVLFA 115
SA F+LG+ VRRR+AAGRTD +S+ +QK +++ FYSC+K+FLWLS++L
Sbjct: 80 GSALFALGTAVRRRIAAGRTDIEISSSGVGSLQKQNHTKKSKLFYSCLKVFLWLSLILLG 139
Query: 116 FELCAYFKGWHFATPNLQLQYIFQSPLAIKGAFDLLYSSWVLVRVHYLAPPLQFLANACI 175
FE+ AYFKGW F T LQLQ+IF KG FD +Y+ WVL+RV YLAPPLQFLAN CI
Sbjct: 140 FEIAAYFKGWSFGTSKLQLQFIFN-----KGFFDWVYTRWVLLRVEYLAPPLQFLANGCI 194
Query: 176 VLFLIQSLDRLILCLGCFWIRFKRIKPVPKHDDTSDLESGQKG-FFPMVLVQIPMCNEKE 234
VLFL+QSLDRLILCLGCFWIRFK+IKPVPK D SDLESG G F PMVLVQIPMCNEKE
Sbjct: 195 VLFLVQSLDRLILCLGCFWIRFKKIKPVPKPDSISDLESGDNGAFLPMVLVQIPMCNEKE 254
Query: 235 VYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDG 294
VYQQSIAAVCNLDWPK KILIQ+LDDSDDP Q+LIKEEV KWQ+ GA IVYRHR+ R+G
Sbjct: 255 VYQQSIAAVCNLDWPKGKILIQILDDSDDPITQSLIKEEVHKWQKLGARIVYRHRVNREG 314
Query: 295 YKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNK 354
YKAGNLKSAMNCSYVKDYEFVAIFDADFQP PDFL++T+PHFKDNEE+GLVQARWSFVNK
Sbjct: 315 YKAGNLKSAMNCSYVKDYEFVAIFDADFQPLPDFLKKTIPHFKDNEEIGLVQARWSFVNK 374
Query: 355 DENLLTRLQDINLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEDSGGWMERTTVEDM 414
+ENLLTRLQ+INL+FHFEVEQQVN VF+NFFGFNGTAGVWRIKALEDSGGW+ERTTVEDM
Sbjct: 375 EENLLTRLQNINLAFHFEVEQQVNSVFLNFFGFNGTAGVWRIKALEDSGGWLERTTVEDM 434
Query: 415 DIAVRAHLRGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRAKVY 474
DIAVRAHL GWKF+FLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLP +I++K+
Sbjct: 435 DIAVRAHLHGWKFVFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPAVIKSKIS 494
Query: 475 I 475
I
Sbjct: 495 I 495
|
Probable beta-1,4-glucan synthase rather involved in the synthesis of the xyloglucan backbone than cellulose. Seems to work simultaneously with xyloglucan 6-xylosyltransferase. Xyloglucan is a noncellulosic polysaccharides of plant cell wall and consists of a glucan backbone substituted by xylose, galactose and fucose. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: - |
| >sp|Q6L538|CSLC7_ORYSJ Probable xyloglucan glycosyltransferase 7 OS=Oryza sativa subsp. japonica GN=CSLC7 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 637 bits (1642), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/475 (68%), Positives = 370/475 (77%), Gaps = 20/475 (4%)
Query: 1 MENPNWSMVELEAPSEEDFLRAEHHTAAPANKTRNRNAKQLTWVLLLKAHKAAGCLTSIA 60
MENPNWS+ E+EA A A R +NA+Q+TWVLLLKAH+AAG LT A
Sbjct: 26 MENPNWSISEVEAAE-----VAPGSPAGAGKAGRGKNARQITWVLLLKAHRAAGRLTGAA 80
Query: 61 SAFFSLGSLVRRRVAAGRTDQPPTSADTHEIQKLRTRFFYSCIKLFLWLSVVLFAFELCA 120
SA ++ S RRRVA+GRTD A E LR R Y CI++ L LS++L A E+ A
Sbjct: 81 SAALAVASAARRRVASGRTD---ADAAPGESTALRARS-YGCIRVSLVLSLLLLAVEVAA 136
Query: 121 YFKGWHFATPNLQLQYIFQSPLAIKGAFDLLYSSWVLVRVHYLAPPLQFLANACIVLFLI 180
Y +GWH S LA+ G F Y+ W+ +R+ YLAPPLQFL NAC+ LF++
Sbjct: 137 YLQGWHLEE--------VASLLAVDGLFAASYAGWMRLRLDYLAPPLQFLTNACVALFMV 188
Query: 181 QSLDRLILCLGCFWIRFKRIKPVPKHDDTS--DLESGQKGFFPMVLVQIPMCNEKEVYQQ 238
QS+DRL+LCLGCFWIRFK IKPVP+ D+E+G G +PMVLVQ+PMCNE+EVYQQ
Sbjct: 189 QSIDRLVLCLGCFWIRFKGIKPVPQAAAAGKPDVEAG-AGDYPMVLVQMPMCNEREVYQQ 247
Query: 239 SIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAG 298
SI AVCNLDWPKS L+QVLDDSDD T LIKEEV KWQ G I+YRHR++RDGYKAG
Sbjct: 248 SIGAVCNLDWPKSNFLVQVLDDSDDATTSALIKEEVEKWQREGVRIIYRHRVIRDGYKAG 307
Query: 299 NLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENL 358
NLKSAMNCSYVKDYEFV IFDADFQP DFL+RTVPHFK +++GLVQARWSFVNKDENL
Sbjct: 308 NLKSAMNCSYVKDYEFVVIFDADFQPQADFLKRTVPHFKGKDDVGLVQARWSFVNKDENL 367
Query: 359 LTRLQDINLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEDSGGWMERTTVEDMDIAV 418
LTRLQ++NL FHFEVEQQVNG F+NFFGFNGTAGVWRIKALEDSGGWMERTTVEDMDIAV
Sbjct: 368 LTRLQNVNLCFHFEVEQQVNGAFLNFFGFNGTAGVWRIKALEDSGGWMERTTVEDMDIAV 427
Query: 419 RAHLRGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRAKV 473
RAHL+GWKF+FLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLC DII++K+
Sbjct: 428 RAHLKGWKFVFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCFVDIIKSKI 482
|
Probable beta-1,4-glucan synthase rather involved in the synthesis of the xyloglucan backbone than cellulose. Seems to work simultaneously with xyloglucan 6-xylosyltransferase. Xyloglucan is a noncellulosic polysaccharides of plant cell wall and consists of a glucan backbone substituted by xylose, galactose and fucose. Oryza sativa subsp. japonica (taxid: 39947) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
| >sp|Q9SB75|CSLC5_ARATH Probable xyloglucan glycosyltransferase 5 OS=Arabidopsis thaliana GN=CSLC5 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 628 bits (1619), Expect = e-179, Method: Compositional matrix adjust.
Identities = 304/482 (63%), Positives = 377/482 (78%), Gaps = 32/482 (6%)
Query: 1 MENPNWSMVELEAPSEEDFLRAEHHTAAPANKTRNRNAKQLTWVLLLKAHKAAGCLTSIA 60
MENPN+S+VE++ P P K+R +NAKQ+TWVLLLKAH+A GCLT +A
Sbjct: 25 MENPNYSVVEIDGPDS---------AFRPVEKSRGKNAKQVTWVLLLKAHRAVGCLTWLA 75
Query: 61 SAFFSLGSLVRRRVAAGRTDQPPTSADTHEI--QKL-RTRFFYSCIKLFLWLSVVLFAFE 117
+ F+SL +++R++ TH + +KL R R+ ++ IKLFL +S+V+ FE
Sbjct: 76 TVFWSLLGAIKKRLSF-----------THPLGSEKLGRDRWLFTAIKLFLAVSLVILGFE 124
Query: 118 LCAYFKGWH-FATPNLQLQYIFQSPLAIKGAFDLLYSSWVLVRVHYLAPPLQFLANACIV 176
+ AYF+GWH F +P+L +I S L I+ F L+Y W+ +R Y+APP++ L+ CIV
Sbjct: 125 IVAYFRGWHYFQSPSL---HIPTSTLEIQSLFHLVYVGWLTLRADYIAPPIKALSKFCIV 181
Query: 177 LFLIQSLDRLILCLGCFWIRFKRIKPVPKHDDT---SDLESGQKGFFPMVLVQIPMCNEK 233
LFLIQS+DRL+LCLGCFWI++K+IKP + D+ +D G +PMVLVQIPMCNE+
Sbjct: 182 LFLIQSVDRLVLCLGCFWIKYKKIKP--RFDEEPFRNDDAEGSGSEYPMVLVQIPMCNER 239
Query: 234 EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRD 293
EVY+QSI+AVC LDWPK +IL+QVLDDS+D + Q LIK EV KW + G NI+YRHR++R
Sbjct: 240 EVYEQSISAVCQLDWPKDRILVQVLDDSNDESIQQLIKAEVAKWSQKGVNIIYRHRLVRT 299
Query: 294 GYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVN 353
GYKAGNLKSAM+C YV+ YE+VAIFDADFQP PDFL+ TVPHFKDN ELGLVQARW+FVN
Sbjct: 300 GYKAGNLKSAMSCDYVEAYEYVAIFDADFQPTPDFLKLTVPHFKDNPELGLVQARWTFVN 359
Query: 354 KDENLLTRLQDINLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEDSGGWMERTTVED 413
KDENLLTRLQ+INL FHFEVEQQVNGVF+NFFGFNGTAGVWRIKALE+SGGW+ERTTVED
Sbjct: 360 KDENLLTRLQNINLCFHFEVEQQVNGVFLNFFGFNGTAGVWRIKALEESGGWLERTTVED 419
Query: 414 MDIAVRAHLRGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRAKV 473
MDIAVRAHL GWKFI+LNDV+ CE+PESYEAY+KQQHRWHSGPMQLFRLCL I+ +K+
Sbjct: 420 MDIAVRAHLHGWKFIYLNDVKVLCEVPESYEAYKKQQHRWHSGPMQLFRLCLGSILTSKI 479
Query: 474 YI 475
I
Sbjct: 480 AI 481
|
Probable beta-1,4-glucan synthase rather involved in the synthesis of the xyloglucan backbone than cellulose. Seems to work simultaneously with xyloglucan 6-xylosyltransferase. Xyloglucan is a noncellulosic polysaccharides of plant cell wall and consists of a glucan backbone substituted by xylose, galactose and fucose. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
| >sp|Q9SJA2|CSLC8_ARATH Probable xyloglucan glycosyltransferase 8 OS=Arabidopsis thaliana GN=CSLC8 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 622 bits (1603), Expect = e-177, Method: Compositional matrix adjust.
Identities = 305/479 (63%), Positives = 369/479 (77%), Gaps = 30/479 (6%)
Query: 1 MENPNWSMVELEAPSEEDFLRAEHHTAAPANKTRNRNAKQLTWVLLLKAHKAAGCLTSIA 60
MENPN+S+VE+E P P K+R +NAKQ+TWVLLLKAHKA GCLT +A
Sbjct: 25 MENPNYSIVEVEEPDS---------AFQPMEKSRGKNAKQVTWVLLLKAHKAVGCLTWVA 75
Query: 61 SAFFSLGSLVRRRVAAGRTDQPPTSADTHEI--QKL-RTRFFYSCIKLFLWLSVVLFAFE 117
+ F+SL V+RR++ TH + ++L R + +S IKLFL S+ + AFE
Sbjct: 76 TVFWSLLGSVKRRLSF-----------THPLGSERLGRDGWLFSAIKLFLVASLAILAFE 124
Query: 118 LCAYFKGWH-FATPNLQLQYIFQSPLAIKGAFDLLYSSWVLVRVHYLAPPLQFLANACIV 176
L AY++GWH F PNL +I S L I+ L Y W+ +R Y+APP++ L+ CIV
Sbjct: 125 LVAYYRGWHYFKNPNL---HIPTSKLEIQSLLHLFYVGWLSLRADYIAPPIKALSKFCIV 181
Query: 177 LFLIQSLDRLILCLGCFWIRFKRIKPV--PKHDDTSDLESGQKGFFPMVLVQIPMCNEKE 234
LFL+QS+DRLILCLGC WI+FK+IKP +H D E G +PMVLVQIPMCNE+E
Sbjct: 182 LFLVQSVDRLILCLGCLWIKFKKIKPRIDEEHFRNDDFE-GSGSEYPMVLVQIPMCNERE 240
Query: 235 VYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDG 294
VY+QSI+AVC LDWPK ++L+QVLDDSDD + Q LI++EV KW + G NI+YRHR++R G
Sbjct: 241 VYEQSISAVCQLDWPKDRLLVQVLDDSDDESIQELIRDEVTKWSQKGVNIIYRHRLVRTG 300
Query: 295 YKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNK 354
YKAGNLKSAM+C YV+ YEFVAIFDADFQPN DFL+ TVPHFK+ ELGLVQARW+FVNK
Sbjct: 301 YKAGNLKSAMSCDYVEAYEFVAIFDADFQPNSDFLKLTVPHFKEKPELGLVQARWAFVNK 360
Query: 355 DENLLTRLQDINLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEDSGGWMERTTVEDM 414
DENLLTRLQ+INL FHFEVEQQVNGVF+NFFGFNGTAGVWRIKALE+SGGW+ERTTVEDM
Sbjct: 361 DENLLTRLQNINLCFHFEVEQQVNGVFLNFFGFNGTAGVWRIKALEESGGWLERTTVEDM 420
Query: 415 DIAVRAHLRGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRAKV 473
DIAVRAHL GWKFI+LNDV+ CE+PESYEAY+KQQHRWHSGPMQLFRLCL I+ +K+
Sbjct: 421 DIAVRAHLHGWKFIYLNDVKVLCEVPESYEAYKKQQHRWHSGPMQLFRLCLRSILTSKI 479
|
Probable beta-1,4-glucan synthase rather involved in the synthesis of the xyloglucan backbone than cellulose. Seems to work simultaneously with xyloglucan 6-xylosyltransferase. Xyloglucan is a noncellulosic polysaccharides of plant cell wall and consists of a glucan backbone substituted by xylose, galactose and fucose. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
| >sp|Q8LIY0|CSLC1_ORYSJ Probable xyloglucan glycosyltransferase 1 OS=Oryza sativa subsp. japonica GN=CSLC1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 620 bits (1598), Expect = e-176, Method: Compositional matrix adjust.
Identities = 326/483 (67%), Positives = 375/483 (77%), Gaps = 24/483 (4%)
Query: 1 MENPNWSMVELEAPSEEDFLRAEHHTAAPANKTRNRNAKQLTWVLLLKAHKAAGCLTSIA 60
ME+P W++ E+EA + A A R +NA+Q+TWVLLLKAH+AAG LT A
Sbjct: 21 MESPEWAISEVEAGAAAPGSPAAGGKAG-----RGKNARQITWVLLLKAHRAAGKLTGAA 75
Query: 61 SAFFSLGSLVRRRVAAGRTDQP-PTSADTHEIQKLRTRFFYSCIKLFLWLSVVLFAFELC 119
SA S+ + RRRVAAGRTD +A E LR RF + ++ FL LSV+L A ++
Sbjct: 76 SAALSVAAAARRRVAAGRTDSDDAAAAPPGESPALRARF-HGFLRAFLLLSVLLLAVDVA 134
Query: 120 AYFKGWHFATPNLQLQYIFQSPLAIKGAFDLLYSSWVLVRVHYLAPPLQFLANACIVLFL 179
A+ +GWH P+L LA++G F Y+SW+ VR+ YLAP LQFLANAC+VLFL
Sbjct: 135 AHAQGWHAVVPDL---------LAVEGLFAAAYASWLRVRLEYLAPGLQFLANACVVLFL 185
Query: 180 IQSLDRLILCLGCFWIRFKRIKPVPKHDD-------TSDLESGQKGFFPMVLVQIPMCNE 232
IQS DRLILCLGC WI+ K IKPVPK + D+E+G F PMVLVQIPMCNE
Sbjct: 186 IQSADRLILCLGCLWIKLKGIKPVPKASGGGGGGKGSDDVEAGADEF-PMVLVQIPMCNE 244
Query: 233 KEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILR 292
KEVYQQSI AVCNLDWP+S L+QVLDDSDD LIKEEV KWQ G I+YRHR++R
Sbjct: 245 KEVYQQSIGAVCNLDWPRSNFLVQVLDDSDDAATSALIKEEVEKWQREGVRILYRHRVIR 304
Query: 293 DGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFV 352
DGYKAGNLKSAMNCSYVKDYEFV IFDADFQP DFL+RTVPHFK NE++GLVQARWSFV
Sbjct: 305 DGYKAGNLKSAMNCSYVKDYEFVVIFDADFQPQADFLKRTVPHFKGNEDVGLVQARWSFV 364
Query: 353 NKDENLLTRLQDINLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEDSGGWMERTTVE 412
NKDENLLTRLQ+INL FHFEVEQQVNGVF+NFFGFNGTAGVWRIKALEDSGGWMERTTVE
Sbjct: 365 NKDENLLTRLQNINLCFHFEVEQQVNGVFLNFFGFNGTAGVWRIKALEDSGGWMERTTVE 424
Query: 413 DMDIAVRAHLRGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRAK 472
DMDIAVRAHL+GWKF+++NDVECQCELPESYEAYRKQQHRWHSGPMQLFRLC DII++K
Sbjct: 425 DMDIAVRAHLKGWKFLYINDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCFVDIIKSK 484
Query: 473 VYI 475
+ +
Sbjct: 485 IGV 487
|
Probable beta-1,4-glucan synthase rather involved in the synthesis of the xyloglucan backbone than cellulose. Seems to work simultaneously with xyloglucan 6-xylosyltransferase. Xyloglucan is a noncellulosic polysaccharides of plant cell wall and consists of a glucan backbone substituted by xylose, galactose and fucose. Oryza sativa subsp. japonica (taxid: 39947) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
| >sp|Q84Z01|CSLCA_ORYSJ Putative xyloglucan glycosyltransferase 10 OS=Oryza sativa subsp. japonica GN=CSLC10 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 617 bits (1592), Expect = e-176, Method: Compositional matrix adjust.
Identities = 331/480 (68%), Positives = 372/480 (77%), Gaps = 35/480 (7%)
Query: 1 MENPNWSMVELEAPSEEDFLRAEHHTAAPANKTRNRNAKQLTWVLLLKAHKAAGCLTSIA 60
M+NPNWS+ E++A E FL A + R +NAKQ+TWVLLLKAH+AAGCL +A
Sbjct: 29 MDNPNWSISEIDADGGE-FL------AGGRRRGRGKNAKQITWVLLLKAHRAAGCLAWLA 81
Query: 61 SAFFSLGSLVRRRVAAGRTDQPPTSADTHEIQKLRTRFFYSCIKLFLWLSVVLFAFELCA 120
SA +LG+ RRRVAAGRTD AD E R+R Y+ I+ L LSV L A EL A
Sbjct: 82 SAAVALGAAARRRVAAGRTD----DADA-ETPAPRSRL-YAFIRASLLLSVFLLAVELAA 135
Query: 121 YFKGWHFATPNLQLQYIFQSPLAIKGAFDLLYSSWVLVRVHYLAPPLQFLANACIVLFLI 180
+ G + + D +SSWV R Y+APPLQ LA+AC+VLFL+
Sbjct: 136 HANG---------------RGRVLAASVDSFHSSWVRFRAAYVAPPLQLLADACVVLFLV 180
Query: 181 QSLDRLILCLGCFWIRFKRIKPVPKHDDTS------DLESGQKG-FFPMVLVQIPMCNEK 233
QS DRL+ CLGC +I RIKP P + DLE G ++PMVLVQIPMCNEK
Sbjct: 181 QSADRLVQCLGCLYIHLNRIKPKPISSPAAAAAALPDLEDPDAGDYYPMVLVQIPMCNEK 240
Query: 234 EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRD 293
EVYQQSIAAVCNLDWP+S IL+QVLDDSDDP Q+LIKEEV KW++ GA IVYRHR+LR+
Sbjct: 241 EVYQQSIAAVCNLDWPRSNILVQVLDDSDDPITQSLIKEEVEKWRQNGARIVYRHRVLRE 300
Query: 294 GYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVN 353
GYKAGNLKSAM+CSYVKDYE+VAIFDADFQP PDFL+RTVPHFKDNEELGLVQARWSFVN
Sbjct: 301 GYKAGNLKSAMSCSYVKDYEYVAIFDADFQPYPDFLKRTVPHFKDNEELGLVQARWSFVN 360
Query: 354 KDENLLTRLQDINLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEDSGGWMERTTVED 413
KDENLLTRLQ+INL FHFEVEQQVNG+FINFFGFNGTAGVWRIKALEDSGGWMERTTVED
Sbjct: 361 KDENLLTRLQNINLCFHFEVEQQVNGIFINFFGFNGTAGVWRIKALEDSGGWMERTTVED 420
Query: 414 MDIAVRAHLRGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRAKV 473
MDIAVRAHL GWKF+FLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIR K+
Sbjct: 421 MDIAVRAHLNGWKFVFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRCKI 480
|
Probable beta-1,4-glucan synthase rather involved in the synthesis of the xyloglucan backbone than cellulose. Seems to work simultaneously with xyloglucan 6-xylosyltransferase. Xyloglucan is a noncellulosic polysaccharides of plant cell wall and consists of a glucan backbone substituted by xylose, galactose and fucose. Oryza sativa subsp. japonica (taxid: 39947) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
| >sp|A2YHR9|CSLCA_ORYSI Putative xyloglucan glycosyltransferase 10 OS=Oryza sativa subsp. indica GN=CSLC10 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 617 bits (1592), Expect = e-176, Method: Compositional matrix adjust.
Identities = 331/480 (68%), Positives = 372/480 (77%), Gaps = 35/480 (7%)
Query: 1 MENPNWSMVELEAPSEEDFLRAEHHTAAPANKTRNRNAKQLTWVLLLKAHKAAGCLTSIA 60
M+NPNWS+ E++A E FL A + R +NAKQ+TWVLLLKAH+AAGCL +A
Sbjct: 29 MDNPNWSISEIDADGGE-FL------AGGRRRGRGKNAKQITWVLLLKAHRAAGCLAWLA 81
Query: 61 SAFFSLGSLVRRRVAAGRTDQPPTSADTHEIQKLRTRFFYSCIKLFLWLSVVLFAFELCA 120
SA +LG+ RRRVAAGRTD AD E R+R Y+ I+ L LSV L A EL A
Sbjct: 82 SAAVALGAAARRRVAAGRTD----DADA-ETPAPRSRL-YAFIRASLLLSVFLLAVELAA 135
Query: 121 YFKGWHFATPNLQLQYIFQSPLAIKGAFDLLYSSWVLVRVHYLAPPLQFLANACIVLFLI 180
+ G + + D +SSWV R Y+APPLQ LA+AC+VLFL+
Sbjct: 136 HANG---------------RGRVLAASVDSFHSSWVRFRAAYVAPPLQLLADACVVLFLV 180
Query: 181 QSLDRLILCLGCFWIRFKRIKPVPKHDDTS------DLESGQKG-FFPMVLVQIPMCNEK 233
QS DRL+ CLGC +I RIKP P + DLE G ++PMVLVQIPMCNEK
Sbjct: 181 QSADRLVQCLGCLYIHLNRIKPKPISSPAAAAAALPDLEDPDAGDYYPMVLVQIPMCNEK 240
Query: 234 EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRD 293
EVYQQSIAAVCNLDWP+S IL+QVLDDSDDP Q+LIKEEV KW++ GA IVYRHR+LR+
Sbjct: 241 EVYQQSIAAVCNLDWPRSNILVQVLDDSDDPITQSLIKEEVEKWRQNGARIVYRHRVLRE 300
Query: 294 GYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVN 353
GYKAGNLKSAM+CSYVKDYE+VAIFDADFQP PDFL+RTVPHFKDNEELGLVQARWSFVN
Sbjct: 301 GYKAGNLKSAMSCSYVKDYEYVAIFDADFQPYPDFLKRTVPHFKDNEELGLVQARWSFVN 360
Query: 354 KDENLLTRLQDINLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEDSGGWMERTTVED 413
KDENLLTRLQ+INL FHFEVEQQVNG+FINFFGFNGTAGVWRIKALEDSGGWMERTTVED
Sbjct: 361 KDENLLTRLQNINLCFHFEVEQQVNGIFINFFGFNGTAGVWRIKALEDSGGWMERTTVED 420
Query: 414 MDIAVRAHLRGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRAKV 473
MDIAVRAHL GWKF+FLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIR K+
Sbjct: 421 MDIAVRAHLNGWKFVFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRCKI 480
|
Probable beta-1,4-glucan synthase rather involved in the synthesis of the xyloglucan backbone than cellulose. Seems to work simultaneously with xyloglucan 6-xylosyltransferase. Xyloglucan is a noncellulosic polysaccharides of plant cell wall and consists of a glucan backbone substituted by xylose, galactose and fucose. Oryza sativa subsp. indica (taxid: 39946) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
| >sp|Q6AU53|CSLC9_ORYSJ Probable xyloglucan glycosyltransferase 9 OS=Oryza sativa subsp. japonica GN=CSLC9 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 591 bits (1524), Expect = e-168, Method: Compositional matrix adjust.
Identities = 292/381 (76%), Positives = 321/381 (84%), Gaps = 11/381 (2%)
Query: 94 LRTRFFYSCIKLFLWLSVVLFAFELCAYFKGWH-FATPNLQLQYIFQSPLAIKGAFDLLY 152
LR+RF Y+ I+ F+ LSV+L EL AY GW A L L I + LY
Sbjct: 20 LRSRF-YAFIRAFVVLSVLLLIVELGAYINGWDDLAASALALPVI---------GVESLY 69
Query: 153 SSWVLVRVHYLAPPLQFLANACIVLFLIQSLDRLILCLGCFWIRFKRIKPVPKHDDTSDL 212
+SW+ R Y+AP +QFL +AC+VLFLIQS DRLI CLGCF+I KRIKP PK D
Sbjct: 70 ASWLRFRATYVAPFIQFLTDACVVLFLIQSADRLIQCLGCFYIHLKRIKPNPKSPALPDA 129
Query: 213 ESGQKGFFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKE 272
E ++PMVLVQIPMCNEKEVYQQSIAAVCNLDWP+S L+QVLDDSDDPT QTLI+E
Sbjct: 130 EDPDAAYYPMVLVQIPMCNEKEVYQQSIAAVCNLDWPRSNFLVQVLDDSDDPTTQTLIRE 189
Query: 273 EVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRT 332
EVLKWQ+ GA IVYRHR+LRDGYKAGNLKSAM+CSYVKDYEFVAIFDADFQPNPDFL+RT
Sbjct: 190 EVLKWQQNGARIVYRHRVLRDGYKAGNLKSAMSCSYVKDYEFVAIFDADFQPNPDFLKRT 249
Query: 333 VPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQQVNGVFINFFGFNGTAG 392
VPHFKDN+ELGLVQARWSFVNKDENLLTRLQ+INL FHFEVEQQVNG+F+NFFGFNGTAG
Sbjct: 250 VPHFKDNDELGLVQARWSFVNKDENLLTRLQNINLCFHFEVEQQVNGIFLNFFGFNGTAG 309
Query: 393 VWRIKALEDSGGWMERTTVEDMDIAVRAHLRGWKFIFLNDVECQCELPESYEAYRKQQHR 452
VWRIKAL+DSGGWMERTTVEDMDIAVRAHLRGWKFIFLNDVECQCELPESYEAYRKQQHR
Sbjct: 310 VWRIKALDDSGGWMERTTVEDMDIAVRAHLRGWKFIFLNDVECQCELPESYEAYRKQQHR 369
Query: 453 WHSGPMQLFRLCLPDIIRAKV 473
WHSGPMQLFRLCLPDII+ K+
Sbjct: 370 WHSGPMQLFRLCLPDIIKCKI 390
|
Probable beta-1,4-glucan synthase rather involved in the synthesis of the xyloglucan backbone than cellulose. Seems to work simultaneously with xyloglucan 6-xylosyltransferase. Xyloglucan is a noncellulosic polysaccharides of plant cell wall and consists of a glucan backbone substituted by xylose, galactose and fucose. Oryza sativa subsp. japonica (taxid: 39947) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
| >sp|Q7PC69|CSLC3_ORYSJ Probable xyloglucan glycosyltransferase 3 OS=Oryza sativa subsp. japonica GN=CSLC3 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 585 bits (1509), Expect = e-166, Method: Compositional matrix adjust.
Identities = 292/502 (58%), Positives = 357/502 (71%), Gaps = 44/502 (8%)
Query: 1 MENPNWSMVELEAPSEEDFLRAEHHTAAPANKTRNRNAKQLTWVLLLKAHKAAGCLTSIA 60
M+NP +S+VE++ P AAP+ K R +NAKQLTWVLLL+AH+A GC+ +A
Sbjct: 27 MDNP-YSLVEIDGPG----------MAAPSEKARGKNAKQLTWVLLLRAHRAVGCVAWLA 75
Query: 61 SAFFSLGSLVRRRVAAGRTDQPPTSADTHEIQKLRTRFFYSCIKLFLWLSVVLFAFELCA 120
+ F+++ V RRV R A+ R R ++ FL LS+ + AFE A
Sbjct: 76 AGFWAVLGAVNRRVRRSRDADAEPDAEASG----RGRAMLRFLRGFLLLSLAMLAFETVA 131
Query: 121 YFKGWHF--ATPNLQLQYIFQSPL-----------------------AIKGAFDLLYSSW 155
+ KGWHF + L +Y+ + P I+G Y +W
Sbjct: 132 HLKGWHFPRSAAGLPEKYLRRLPEHLQHLPEHLRRHLPEHLRMPEKEEIEGWLHRAYVAW 191
Query: 156 VLVRVHYLAPPLQFLANACIVLFLIQSLDRLILCLGCFWIRFKRIKPVP----KHDDTSD 211
+ R+ Y+A +Q L+ CI LF++QS+DRL+LCLGCFWI+ + IKPV +DD
Sbjct: 192 LAFRIDYIAWAIQKLSGFCIALFMVQSVDRLVLCLGCFWIKLRGIKPVADTSISNDDIEA 251
Query: 212 LESGQKGFFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIK 271
G+FPMVL+Q+PMCNEKEVY+ SI+ VC +DWP+ ++L+QVLDDSDD T Q LIK
Sbjct: 252 TAGDGGGYFPMVLIQMPMCNEKEVYETSISHVCQIDWPRERMLVQVLDDSDDETCQMLIK 311
Query: 272 EEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRR 331
EV KW + G NI+YRHR+ R GYKAGNLKSAM+C YV+DYEFVAIFDADFQPNPDFL+
Sbjct: 312 AEVTKWSQRGVNIIYRHRLNRTGYKAGNLKSAMSCDYVRDYEFVAIFDADFQPNPDFLKL 371
Query: 332 TVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQQVNGVFINFFGFNGTA 391
TVPHFK N ELGLVQARWSFVNKDENLLTRLQ+INL FHFEVEQQVNGV+++FFGFNGTA
Sbjct: 372 TVPHFKGNPELGLVQARWSFVNKDENLLTRLQNINLCFHFEVEQQVNGVYLSFFGFNGTA 431
Query: 392 GVWRIKALEDSGGWMERTTVEDMDIAVRAHLRGWKFIFLNDVECQCELPESYEAYRKQQH 451
GVWRIKALEDSGGWMERTTVEDMDIAVRAHL GWKFIFLNDV+ CELPESY+AYRKQQH
Sbjct: 432 GVWRIKALEDSGGWMERTTVEDMDIAVRAHLNGWKFIFLNDVKVLCELPESYQAYRKQQH 491
Query: 452 RWHSGPMQLFRLCLPDIIRAKV 473
RWHSGPMQLFRLCLP + ++K+
Sbjct: 492 RWHSGPMQLFRLCLPAVFKSKI 513
|
Probable beta-1,4-glucan synthase rather involved in the synthesis of the xyloglucan backbone than cellulose. Seems to work simultaneously with xyloglucan 6-xylosyltransferase. Xyloglucan is a noncellulosic polysaccharides of plant cell wall and consists of a glucan backbone substituted by xylose, galactose and fucose. Oryza sativa subsp. japonica (taxid: 39947) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
| >sp|Q9SRT3|CSLC6_ARATH Probable xyloglucan glycosyltransferase 6 OS=Arabidopsis thaliana GN=CSLC6 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 578 bits (1490), Expect = e-164, Method: Compositional matrix adjust.
Identities = 290/469 (61%), Positives = 345/469 (73%), Gaps = 26/469 (5%)
Query: 11 LEAPSEEDFLRAEHHTAAPAN----KTRNRNAKQLTWVLLLKAHKAAGCLTSIASAFFSL 66
L A +E FL E T A + + R R +QL+ + LLK + A I ++F L
Sbjct: 25 LYAGDDEAFLTVEIRTPATVDPDKDRIRTRTVRQLSRLYLLKFKQLASSFLWIGNSFLYL 84
Query: 67 GSLVRRRVAAGRTDQPPTSADTHEIQKLRTRFFYSCIKLFLWLSVVLFAFELCAYFKGWH 126
RR+A D PP+ + + + Y IK FL + V+L FEL AYFKGWH
Sbjct: 85 VRTANRRIA---NDNPPSVSSSARL--------YRLIKGFLVVVVLLLCFELAAYFKGWH 133
Query: 127 FATPNLQLQYIFQSPLAIKGAFDLLYSSWVLVRVHYLAPPLQFLANACIVLFLIQSLDRL 186
F P++ + + A +++Y+ W+ +R YLAPPLQ L N CIVLFLIQS+DRL
Sbjct: 134 FTPPSVA---------SAEVAVEVVYAWWLEIRASYLAPPLQSLTNVCIVLFLIQSVDRL 184
Query: 187 ILCLGCFWIRFKRIKPVPKHDDTSDL--ESGQKGFFPMVLVQIPMCNEKEVYQQSIAAVC 244
+L LGCFWI+ +RIKPV + + L E + +PMV+VQIPMCNEKEVYQQSI AVC
Sbjct: 185 VLVLGCFWIKLRRIKPVASMEYPTKLVGEGVRLEDYPMVIVQIPMCNEKEVYQQSIGAVC 244
Query: 245 NLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAM 304
LDWP+ ++L+QVLDDS + Q LIK EV KWQ+ G IVYRHR++R GYKAGNLK+AM
Sbjct: 245 MLDWPRERMLVQVLDDSSELDVQQLIKAEVQKWQQRGVRIVYRHRLIRTGYKAGNLKAAM 304
Query: 305 NCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQD 364
NC YVKDYEFVAIFDADFQP DFL++TVPHFK NEEL LVQ RW+FVNKDENLLTRLQ+
Sbjct: 305 NCEYVKDYEFVAIFDADFQPPADFLKKTVPHFKGNEELALVQTRWAFVNKDENLLTRLQN 364
Query: 365 INLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEDSGGWMERTTVEDMDIAVRAHLRG 424
INLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALED GGW+ERTTVEDMDIAVRAHL G
Sbjct: 365 INLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEDCGGWLERTTVEDMDIAVRAHLCG 424
Query: 425 WKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRAKV 473
WKFI+LNDV+C CELPESYEAY+KQQ+RWHSGPMQLFRLC DI+R+KV
Sbjct: 425 WKFIYLNDVKCLCELPESYEAYKKQQYRWHSGPMQLFRLCFFDILRSKV 473
|
Probable beta-1,4-glucan synthase rather involved in the synthesis of the xyloglucan backbone than cellulose. Seems to work simultaneously with xyloglucan 6-xylosyltransferase. Xyloglucan is a noncellulosic polysaccharides of plant cell wall and consists of a glucan backbone substituted by xylose, galactose and fucose. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 482 | ||||||
| 224067154 | 701 | predicted protein [Populus trichocarpa] | 0.983 | 0.676 | 0.794 | 0.0 | |
| 429326486 | 701 | cellulose synthase-like protein [Populus | 0.983 | 0.676 | 0.794 | 0.0 | |
| 429326488 | 701 | cellulose synthase-like protein [Populus | 0.983 | 0.676 | 0.796 | 0.0 | |
| 224084451 | 701 | predicted protein [Populus trichocarpa] | 0.983 | 0.676 | 0.794 | 0.0 | |
| 255537950 | 696 | transferase, transferring glycosyl group | 0.975 | 0.675 | 0.805 | 0.0 | |
| 449447085 | 706 | PREDICTED: probable xyloglucan glycosylt | 0.981 | 0.669 | 0.784 | 0.0 | |
| 225458916 | 699 | PREDICTED: probable xyloglucan glycosylt | 0.977 | 0.673 | 0.790 | 0.0 | |
| 15235900 | 699 | putative xyloglucan glycosyltransferase | 0.962 | 0.663 | 0.769 | 0.0 | |
| 297813199 | 697 | hypothetical protein ARALYDRAFT_489694 [ | 0.962 | 0.665 | 0.774 | 0.0 | |
| 356510626 | 708 | PREDICTED: probable xyloglucan glycosylt | 0.983 | 0.669 | 0.760 | 0.0 |
| >gi|224067154|ref|XP_002302382.1| predicted protein [Populus trichocarpa] gi|222844108|gb|EEE81655.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 811 bits (2096), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/476 (79%), Positives = 419/476 (88%), Gaps = 2/476 (0%)
Query: 1 MENPNWSMVELEAPSEEDFLRAEHHTAAPANKTRNRNAKQLTWVLLLKAHKAAGCLTSIA 60
MENPNWSMVELE PSEEDFL + + +K+RN+NAKQLTWVLLLKAHKAAGCLTSIA
Sbjct: 22 MENPNWSMVELEGPSEEDFLITDSPSRLGRDKSRNKNAKQLTWVLLLKAHKAAGCLTSIA 81
Query: 61 SAFFSLGSLVRRRVAAGRTDQPPTSAD-THEIQKLRTRFFYSCIKLFLWLSVVLFAFELC 119
+ SLGS ++RR+ +GRTD T D +E ++TRF Y+ IK+FLW+SV+L FE+
Sbjct: 82 TTMLSLGSAIKRRIHSGRTDTETTDIDRENENPTVKTRF-YTSIKIFLWMSVLLLGFEIA 140
Query: 120 AYFKGWHFATPNLQLQYIFQSPLAIKGAFDLLYSSWVLVRVHYLAPPLQFLANACIVLFL 179
AYFKGWHF P+LQLQY+ +P K FD LYS WVL RV YLAPPLQFLANACIVLFL
Sbjct: 141 AYFKGWHFGAPHLQLQYLLATPFGFKDIFDSLYSRWVLFRVEYLAPPLQFLANACIVLFL 200
Query: 180 IQSLDRLILCLGCFWIRFKRIKPVPKHDDTSDLESGQKGFFPMVLVQIPMCNEKEVYQQS 239
IQS+DRL+LCLGCFWIRFK IKP+PK D +DLESG+ GFFPMVLVQIPMCNEKEVYQQS
Sbjct: 201 IQSIDRLVLCLGCFWIRFKNIKPIPKQDAVADLESGENGFFPMVLVQIPMCNEKEVYQQS 260
Query: 240 IAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGN 299
IAAVCNLDWPKSK LIQ+LDDSDDPT Q LIKEEV KWQ+ GA I+YRHR++RDGYKAGN
Sbjct: 261 IAAVCNLDWPKSKFLIQILDDSDDPTTQLLIKEEVHKWQQEGARILYRHRVIRDGYKAGN 320
Query: 300 LKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLL 359
LKSAMNCSYVKDYE+VAIFDADFQP PDFL++TVPHFKDNEE+GLVQARWSFVNKDENLL
Sbjct: 321 LKSAMNCSYVKDYEYVAIFDADFQPTPDFLKKTVPHFKDNEEIGLVQARWSFVNKDENLL 380
Query: 360 TRLQDINLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEDSGGWMERTTVEDMDIAVR 419
TRLQ+INL+FHFEVEQQVNG FINFFGFNGTAGVWRIKALE+SGGW+ERTTVEDMDIAVR
Sbjct: 381 TRLQNINLAFHFEVEQQVNGTFINFFGFNGTAGVWRIKALEESGGWLERTTVEDMDIAVR 440
Query: 420 AHLRGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRAKVYI 475
AHL GWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIR+K+ I
Sbjct: 441 AHLHGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRSKISI 496
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|429326486|gb|AFZ78583.1| cellulose synthase-like protein [Populus tomentosa] | Back alignment and taxonomy information |
|---|
Score = 811 bits (2095), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/476 (79%), Positives = 419/476 (88%), Gaps = 2/476 (0%)
Query: 1 MENPNWSMVELEAPSEEDFLRAEHHTAAPANKTRNRNAKQLTWVLLLKAHKAAGCLTSIA 60
MENPNWSMVELE PSEEDFL + + +K+RN+NAKQLTWVLLLKAHKAAGCLTSIA
Sbjct: 22 MENPNWSMVELEGPSEEDFLITDSPSRLGRDKSRNKNAKQLTWVLLLKAHKAAGCLTSIA 81
Query: 61 SAFFSLGSLVRRRVAAGRTDQPPTSAD-THEIQKLRTRFFYSCIKLFLWLSVVLFAFELC 119
+ SLGS ++RR+ +GRTD T D +E ++TRF Y+ IK+FLW+SV+L FE+
Sbjct: 82 TTMVSLGSAIKRRIHSGRTDTETTDIDRENENPTVKTRF-YTSIKIFLWMSVLLLGFEIA 140
Query: 120 AYFKGWHFATPNLQLQYIFQSPLAIKGAFDLLYSSWVLVRVHYLAPPLQFLANACIVLFL 179
AYFKGWHF P+LQLQY+ +P K FD LYS WVL RV YLAPPLQFLANACIVLFL
Sbjct: 141 AYFKGWHFGAPHLQLQYLLATPFGFKDIFDSLYSRWVLFRVEYLAPPLQFLANACIVLFL 200
Query: 180 IQSLDRLILCLGCFWIRFKRIKPVPKHDDTSDLESGQKGFFPMVLVQIPMCNEKEVYQQS 239
IQS+DRL+LCLGCFWIRFK IKP+PK D +DLESG+ GFFPMVLVQIPMCNEKEVYQQS
Sbjct: 201 IQSIDRLVLCLGCFWIRFKNIKPIPKQDAVADLESGENGFFPMVLVQIPMCNEKEVYQQS 260
Query: 240 IAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGN 299
IAAVCNLDWPKSK LIQ+LDDSDDPT Q LIKEEV KWQ+ GA I+YRHR++RDGYKAGN
Sbjct: 261 IAAVCNLDWPKSKFLIQILDDSDDPTTQLLIKEEVHKWQQEGARILYRHRVIRDGYKAGN 320
Query: 300 LKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLL 359
LKSAMNCSYVKDYE+VAIFDADFQP PDFL++TVPHFKDNEE+GLVQARWSFVNKDENLL
Sbjct: 321 LKSAMNCSYVKDYEYVAIFDADFQPTPDFLKKTVPHFKDNEEIGLVQARWSFVNKDENLL 380
Query: 360 TRLQDINLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEDSGGWMERTTVEDMDIAVR 419
TRLQ+INL+FHFEVEQQVNG FINFFGFNGTAGVWRIKALE+SGGW+ERTTVEDMDIAVR
Sbjct: 381 TRLQNINLAFHFEVEQQVNGTFINFFGFNGTAGVWRIKALEESGGWLERTTVEDMDIAVR 440
Query: 420 AHLRGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRAKVYI 475
AHL GWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIR+K+ I
Sbjct: 441 AHLHGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRSKISI 496
|
Source: Populus tomentosa Species: Populus tomentosa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|429326488|gb|AFZ78584.1| cellulose synthase-like protein [Populus tomentosa] | Back alignment and taxonomy information |
|---|
Score = 808 bits (2086), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/476 (79%), Positives = 419/476 (88%), Gaps = 2/476 (0%)
Query: 1 MENPNWSMVELEAPSEEDFLRAEHHTAAPANKTRNRNAKQLTWVLLLKAHKAAGCLTSIA 60
MENPNWSMVELE PSEEDFL + + +K+RN+NAKQLTWVLLLKAHKAAGCLTSIA
Sbjct: 22 MENPNWSMVELEGPSEEDFLITDSPSRLGRDKSRNKNAKQLTWVLLLKAHKAAGCLTSIA 81
Query: 61 SAFFSLGSLVRRRVAAGRTDQPPTSAD-THEIQKLRTRFFYSCIKLFLWLSVVLFAFELC 119
+A +LGS ++RR+ +GRTD T D +E ++TRF Y+ IK+FLWLSV+L FE+
Sbjct: 82 TAMVTLGSAIKRRIHSGRTDIETTDIDRENENPTVKTRF-YTFIKIFLWLSVLLLGFEVA 140
Query: 120 AYFKGWHFATPNLQLQYIFQSPLAIKGAFDLLYSSWVLVRVHYLAPPLQFLANACIVLFL 179
AYFKGWHF P+LQLQY+ P + FD LYS WVL RV YLAPPLQFLANACIVLFL
Sbjct: 141 AYFKGWHFGAPHLQLQYLLAMPFGFQDIFDSLYSRWVLFRVEYLAPPLQFLANACIVLFL 200
Query: 180 IQSLDRLILCLGCFWIRFKRIKPVPKHDDTSDLESGQKGFFPMVLVQIPMCNEKEVYQQS 239
+QS+DRL+LCLGCFWIRFK IKP+P D +DLESG+ GFFPMVLVQIPMCNEKEVYQQS
Sbjct: 201 VQSIDRLVLCLGCFWIRFKNIKPIPNQDAVADLESGENGFFPMVLVQIPMCNEKEVYQQS 260
Query: 240 IAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGN 299
IAAVCNLDWPKSKILIQ+LDDSDDPT Q LIKEEV KWQ+ GA+I+YRHR++RDGYKAGN
Sbjct: 261 IAAVCNLDWPKSKILIQILDDSDDPTTQLLIKEEVNKWQQEGAHILYRHRVIRDGYKAGN 320
Query: 300 LKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLL 359
LKSAMNCSYVKDYEFVAIFDADFQP PDFL+RTVPHFK NEELGLVQARWSFVNKDENLL
Sbjct: 321 LKSAMNCSYVKDYEFVAIFDADFQPTPDFLKRTVPHFKGNEELGLVQARWSFVNKDENLL 380
Query: 360 TRLQDINLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEDSGGWMERTTVEDMDIAVR 419
TRLQ+INL+FHFEVEQQVNG+FINFFGFNGTAGVWRIKALEDSGGW+ERTTVEDMDIAVR
Sbjct: 381 TRLQNINLAFHFEVEQQVNGIFINFFGFNGTAGVWRIKALEDSGGWLERTTVEDMDIAVR 440
Query: 420 AHLRGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRAKVYI 475
AHL GWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLP IIR+K+ I
Sbjct: 441 AHLHGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPAIIRSKISI 496
|
Source: Populus tomentosa Species: Populus tomentosa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224084451|ref|XP_002307301.1| predicted protein [Populus trichocarpa] gi|222856750|gb|EEE94297.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 807 bits (2085), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/476 (79%), Positives = 419/476 (88%), Gaps = 2/476 (0%)
Query: 1 MENPNWSMVELEAPSEEDFLRAEHHTAAPANKTRNRNAKQLTWVLLLKAHKAAGCLTSIA 60
MENPNWSMVELE PSEEDFL + + +K+RN+NAKQLTWVLLLKAHKAAGCLTSIA
Sbjct: 22 MENPNWSMVELEGPSEEDFLITDSPSRLGRDKSRNKNAKQLTWVLLLKAHKAAGCLTSIA 81
Query: 61 SAFFSLGSLVRRRVAAGRTDQPPTSAD-THEIQKLRTRFFYSCIKLFLWLSVVLFAFELC 119
+A +LGS ++RR+ +GRTD T D +E ++TRF Y+ IK+FLWLSV+L FE+
Sbjct: 82 TAMVTLGSAIKRRIHSGRTDIETTDIDRENENPTVKTRF-YTFIKIFLWLSVLLLGFEVA 140
Query: 120 AYFKGWHFATPNLQLQYIFQSPLAIKGAFDLLYSSWVLVRVHYLAPPLQFLANACIVLFL 179
AYFKGWHF P+LQLQY+ P + FD LYS WVL RV YLAPPLQFLANACIVLFL
Sbjct: 141 AYFKGWHFGAPHLQLQYLLAMPFGFQDIFDSLYSRWVLFRVEYLAPPLQFLANACIVLFL 200
Query: 180 IQSLDRLILCLGCFWIRFKRIKPVPKHDDTSDLESGQKGFFPMVLVQIPMCNEKEVYQQS 239
+QS+DRL+LCLGCFWIRFK IKP+P D +DLESG+ GFFPMVLVQIPMCNEKEVYQQS
Sbjct: 201 VQSIDRLVLCLGCFWIRFKNIKPIPNQDAVADLESGENGFFPMVLVQIPMCNEKEVYQQS 260
Query: 240 IAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGN 299
IAAVCNLDWPKSKIL+Q+LDDSDDPT Q LIKEEV KWQ+ GA+I+YRHR++RDGYKAGN
Sbjct: 261 IAAVCNLDWPKSKILVQILDDSDDPTTQLLIKEEVNKWQQEGAHILYRHRVIRDGYKAGN 320
Query: 300 LKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLL 359
LKSAMNCSYVKDYEFVAIFDADFQP PDFL+RTVPHFK NEELGLVQARWSFVNKDENLL
Sbjct: 321 LKSAMNCSYVKDYEFVAIFDADFQPTPDFLKRTVPHFKGNEELGLVQARWSFVNKDENLL 380
Query: 360 TRLQDINLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEDSGGWMERTTVEDMDIAVR 419
TRLQ+INL+FHFEVEQQVNG+FINFFGFNGTAGVWRIKALEDSGGW+ERTTVEDMDIAVR
Sbjct: 381 TRLQNINLAFHFEVEQQVNGIFINFFGFNGTAGVWRIKALEDSGGWLERTTVEDMDIAVR 440
Query: 420 AHLRGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRAKVYI 475
AHL GWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLP IIR+K+ I
Sbjct: 441 AHLHGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPAIIRSKISI 496
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255537950|ref|XP_002510040.1| transferase, transferring glycosyl groups, putative [Ricinus communis] gi|223550741|gb|EEF52227.1| transferase, transferring glycosyl groups, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 800 bits (2065), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/478 (80%), Positives = 421/478 (88%), Gaps = 8/478 (1%)
Query: 1 MENPNWSMVELEAPSEEDFLRAEHHTAAPANKTRNRNAKQLTWVLLLKAHKAAGCLTSIA 60
MENPNWSMVELE PS+EDFL A ++ RN+NAKQLTWVLLLKAHKAAGCLTSIA
Sbjct: 22 MENPNWSMVELEGPSDEDFLIA----GDSPSRRRNKNAKQLTWVLLLKAHKAAGCLTSIA 77
Query: 61 SAFFSLGSLVRRRVAAGRTD---QPPTSADTHEIQKLRTRFFYSCIKLFLWLSVVLFAFE 117
S SLGS+++RR+ +GRTD + S+ +E +RTRF+Y CIK FL LSV+L FE
Sbjct: 78 STMVSLGSVIKRRLRSGRTDTDTEAEISSRENENPTVRTRFYY-CIKAFLLLSVLLLGFE 136
Query: 118 LCAYFKGWHFATPNLQLQYIFQSPLAIKGAFDLLYSSWVLVRVHYLAPPLQFLANACIVL 177
+ AYFKGWHF P+LQLQ++ +P K FD LYS WVL+RV YLAPPLQFLAN CIVL
Sbjct: 137 IAAYFKGWHFGAPHLQLQHLLATPFGFKDVFDSLYSRWVLIRVEYLAPPLQFLANVCIVL 196
Query: 178 FLIQSLDRLILCLGCFWIRFKRIKPVPKHDDTSDLESGQKGFFPMVLVQIPMCNEKEVYQ 237
FLIQSLDRL+LCLGCFWIRFK+IKP+PK D S LESGQKGFFPMVLVQIPMCNEKEVYQ
Sbjct: 197 FLIQSLDRLVLCLGCFWIRFKKIKPIPKEDPVSALESGQKGFFPMVLVQIPMCNEKEVYQ 256
Query: 238 QSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKA 297
QSIAA CNLDWPKS ILIQVLDDSDDPTAQTLIKEEV KWQ GA+IVYRHR++R+GYKA
Sbjct: 257 QSIAACCNLDWPKSNILIQVLDDSDDPTAQTLIKEEVNKWQHEGAHIVYRHRVIREGYKA 316
Query: 298 GNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDEN 357
GNLKSAMNCSYVKDYEFVAIFDADFQP PDFL+RTVPHFKDNEELGLVQARWSFVNKDEN
Sbjct: 317 GNLKSAMNCSYVKDYEFVAIFDADFQPTPDFLKRTVPHFKDNEELGLVQARWSFVNKDEN 376
Query: 358 LLTRLQDINLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEDSGGWMERTTVEDMDIA 417
LLTRLQ+INL+FHFEVEQQVNG+FINFFGFNGTAGVWRIKALED+GGW+ERTTVEDMDIA
Sbjct: 377 LLTRLQNINLAFHFEVEQQVNGIFINFFGFNGTAGVWRIKALEDAGGWLERTTVEDMDIA 436
Query: 418 VRAHLRGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRAKVYI 475
VRAHL GWKF+FLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRAK+ I
Sbjct: 437 VRAHLHGWKFVFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRAKISI 494
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449447085|ref|XP_004141300.1| PREDICTED: probable xyloglucan glycosyltransferase 12-like [Cucumis sativus] gi|449509266|ref|XP_004163539.1| PREDICTED: probable xyloglucan glycosyltransferase 12-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 797 bits (2058), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/482 (78%), Positives = 422/482 (87%), Gaps = 9/482 (1%)
Query: 1 MENPNWSMVELEAPSEEDFLRA-EHHTAAPANKTRNRNAKQLTWVLLLKAHKAAGCLTSI 59
MENPNWSMVELE PSE+DFL A E T+ K R +NAKQLTWVLLLKAH+AAGCLTSI
Sbjct: 22 MENPNWSMVELEGPSEDDFLIAGESPTSRVREKGRGKNAKQLTWVLLLKAHRAAGCLTSI 81
Query: 60 ASAFFSLGSLVRRRVAAGRTDQPPTSADT------HEIQKLRTRFFYSCIKLFLWLSVVL 113
SA L + VRRRVA+GRTD+ D E ++TRF YSCIK+FLWLSV+L
Sbjct: 82 GSAMVDLAAAVRRRVASGRTDEEDADNDVTVGGREKENPTVKTRF-YSCIKVFLWLSVLL 140
Query: 114 FAFELCAYFKGWHFATPNLQLQYIFQSPLAIKGAFDLLYSSWVLVRVHYLAPPLQFLANA 173
FE+ A+FKGWHF +P LQL Y++ SP KGAF +Y+ WVL+RV YLAPPLQFLANA
Sbjct: 141 LCFEIAAFFKGWHFGSPKLQLDYLWASPWGFKGAFGWIYAQWVLIRVEYLAPPLQFLANA 200
Query: 174 CIVLFLIQSLDRLILCLGCFWIRFKRIKPVPKHDDTSDLESGQKGFFPMVLVQIPMCNEK 233
CI+LF+IQSLDRL+LCLGCFWIRFK+I+PV K +D DLESG+KG+FPMVLVQIPMCNEK
Sbjct: 201 CIILFIIQSLDRLVLCLGCFWIRFKKIQPVLKPED-EDLESGEKGYFPMVLVQIPMCNEK 259
Query: 234 EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRD 293
EVYQQSIAA+CNLDWPK+K+LIQVLDDSDDPT Q LIKEEV KWQ+ GANI+YRHR++RD
Sbjct: 260 EVYQQSIAAICNLDWPKTKLLIQVLDDSDDPTTQLLIKEEVHKWQQEGANIIYRHRVIRD 319
Query: 294 GYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVN 353
GYKAGNLKSAMNCSYVKDYEFVAIFDADFQP PDFL+RTVPHFKDNEELGLVQARWSFVN
Sbjct: 320 GYKAGNLKSAMNCSYVKDYEFVAIFDADFQPTPDFLKRTVPHFKDNEELGLVQARWSFVN 379
Query: 354 KDENLLTRLQDINLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEDSGGWMERTTVED 413
+DENLLTRLQ+INL+FHFEVEQQVNGVF+NFFGFNGTAGVWRIKALED+GGW+ERTTVED
Sbjct: 380 RDENLLTRLQNINLAFHFEVEQQVNGVFLNFFGFNGTAGVWRIKALEDAGGWLERTTVED 439
Query: 414 MDIAVRAHLRGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRAKV 473
MDIAVRAHL GWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLP +IR+K+
Sbjct: 440 MDIAVRAHLHGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPAVIRSKI 499
Query: 474 YI 475
I
Sbjct: 500 SI 501
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225458916|ref|XP_002285486.1| PREDICTED: probable xyloglucan glycosyltransferase 12 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 791 bits (2042), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/478 (79%), Positives = 417/478 (87%), Gaps = 7/478 (1%)
Query: 1 MENPNWSMVELEAPSEEDFLRAEHHTAAPANKTRNRNAKQLTWVLLLKAHKAAGCLTSIA 60
MENPNWS+ ELE PS++DFL A +K R +NA+QLTWVLLLKAHKAAGCLTSIA
Sbjct: 22 MENPNWSIAELEGPSDDDFLLAGSPNTN-RDKGRGKNARQLTWVLLLKAHKAAGCLTSIA 80
Query: 61 SAFFSLGSLVRRRVAAGRTDQPPTSADTHEIQK--LRTRFFYSCIKLFLWLSVVLFAFEL 118
SA F L + VRRRVA+GRTD + E + +++RF YSCIK+FLWLSVVL FE+
Sbjct: 81 SAMFGLAAAVRRRVASGRTDTDNDNGGGMEQENPTVKSRF-YSCIKVFLWLSVVLLVFEV 139
Query: 119 CAYFKGWHFATPNLQLQYIFQSPLAIKGAFDLLYSSWVLVRVHYLAPPLQFLANACIVLF 178
AYFKGWHF P+LQLQY+ +P +K F+ LYS WVL+RV YLAPPLQFLANACIVLF
Sbjct: 140 AAYFKGWHFGAPHLQLQYLLTAPYGVKDIFNSLYSRWVLIRVEYLAPPLQFLANACIVLF 199
Query: 179 LIQSLDRLILCLGCFWIRFKRIKPVPKHDDTSDLESGQ-KGFFPMVLVQIPMCNEKEVYQ 237
LIQS+DRL+LCLGCFWI+FK+IKPVPK T DLESG G+FP VLVQIPMCNEKEVYQ
Sbjct: 200 LIQSVDRLVLCLGCFWIKFKKIKPVPK--GTVDLESGDGNGYFPRVLVQIPMCNEKEVYQ 257
Query: 238 QSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKA 297
QSIAA CNLDWPKS ILIQVLDDSDDP Q +IKEEV KWQ+ GA+I+YRHR++RDGYKA
Sbjct: 258 QSIAACCNLDWPKSSILIQVLDDSDDPVTQLMIKEEVTKWQQEGAHILYRHRVIRDGYKA 317
Query: 298 GNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDEN 357
GNLKSAMNCSYVKDYEFVAIFDADFQP PDFL+RTVPHFKDNEELGLVQARWSFVNKDEN
Sbjct: 318 GNLKSAMNCSYVKDYEFVAIFDADFQPTPDFLKRTVPHFKDNEELGLVQARWSFVNKDEN 377
Query: 358 LLTRLQDINLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEDSGGWMERTTVEDMDIA 417
LLTRLQ+INLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEDSGGW+ERTTVEDMDIA
Sbjct: 378 LLTRLQNINLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEDSGGWLERTTVEDMDIA 437
Query: 418 VRAHLRGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRAKVYI 475
VRAHL+GWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPD+IR+K+ I
Sbjct: 438 VRAHLQGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDVIRSKISI 495
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15235900|ref|NP_192536.1| putative xyloglucan glycosyltransferase 12 [Arabidopsis thaliana] gi|75216205|sp|Q9ZQB9.1|CSLCC_ARATH RecName: Full=Probable xyloglucan glycosyltransferase 12; AltName: Full=Cellulose synthase-like protein C12; Short=AtCslC12 gi|4309698|gb|AAD15482.1| putative glucosyltransferase [Arabidopsis thaliana] gi|7267435|emb|CAB77947.1| putative glucosyltransferase [Arabidopsis thaliana] gi|21592678|gb|AAM64627.1| putative glucosyltransferase [Arabidopsis thaliana] gi|26451988|dbj|BAC43084.1| putative glucosyltransferase [Arabidopsis thaliana] gi|31711706|gb|AAP68209.1| At4g07960 [Arabidopsis thaliana] gi|332657186|gb|AEE82586.1| putative xyloglucan glycosyltransferase 12 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 781 bits (2016), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/481 (76%), Positives = 416/481 (86%), Gaps = 17/481 (3%)
Query: 1 MENPN-WSMVELEAPSEEDFLRAEHHTAAPANKTRNRNAKQLTWVLLLKAHKAAGCLTSI 59
MENPN WSMVELE+PS +DFL H K+RN+NA+QLTWVLLLKAH+AAGCLTS+
Sbjct: 26 MENPNNWSMVELESPSHDDFLVRTHE------KSRNKNARQLTWVLLLKAHRAAGCLTSL 79
Query: 60 ASAFFSLGSLVRRRVAAGRTDQPPTSADTHEIQKL----RTRFFYSCIKLFLWLSVVLFA 115
SA F+LG+ VRRR+AAGRTD +S+ +QK +++ FYSC+K+FLWLS++L
Sbjct: 80 GSALFALGTAVRRRIAAGRTDIEISSSGVGSLQKQNHTKKSKLFYSCLKVFLWLSLILLG 139
Query: 116 FELCAYFKGWHFATPNLQLQYIFQSPLAIKGAFDLLYSSWVLVRVHYLAPPLQFLANACI 175
FE+ AYFKGW F T LQLQ+IF KG FD +Y+ WVL+RV YLAPPLQFLAN CI
Sbjct: 140 FEIAAYFKGWSFGTSKLQLQFIFN-----KGFFDWVYTRWVLLRVEYLAPPLQFLANGCI 194
Query: 176 VLFLIQSLDRLILCLGCFWIRFKRIKPVPKHDDTSDLESGQKG-FFPMVLVQIPMCNEKE 234
VLFL+QSLDRLILCLGCFWIRFK+IKPVPK D SDLESG G F PMVLVQIPMCNEKE
Sbjct: 195 VLFLVQSLDRLILCLGCFWIRFKKIKPVPKPDSISDLESGDNGAFLPMVLVQIPMCNEKE 254
Query: 235 VYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDG 294
VYQQSIAAVCNLDWPK KILIQ+LDDSDDP Q+LIKEEV KWQ+ GA IVYRHR+ R+G
Sbjct: 255 VYQQSIAAVCNLDWPKGKILIQILDDSDDPITQSLIKEEVHKWQKLGARIVYRHRVNREG 314
Query: 295 YKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNK 354
YKAGNLKSAMNCSYVKDYEFVAIFDADFQP PDFL++T+PHFKDNEE+GLVQARWSFVNK
Sbjct: 315 YKAGNLKSAMNCSYVKDYEFVAIFDADFQPLPDFLKKTIPHFKDNEEIGLVQARWSFVNK 374
Query: 355 DENLLTRLQDINLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEDSGGWMERTTVEDM 414
+ENLLTRLQ+INL+FHFEVEQQVN VF+NFFGFNGTAGVWRIKALEDSGGW+ERTTVEDM
Sbjct: 375 EENLLTRLQNINLAFHFEVEQQVNSVFLNFFGFNGTAGVWRIKALEDSGGWLERTTVEDM 434
Query: 415 DIAVRAHLRGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRAKVY 474
DIAVRAHL GWKF+FLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLP +I++K+
Sbjct: 435 DIAVRAHLHGWKFVFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPAVIKSKIS 494
Query: 475 I 475
I
Sbjct: 495 I 495
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297813199|ref|XP_002874483.1| hypothetical protein ARALYDRAFT_489694 [Arabidopsis lyrata subsp. lyrata] gi|297320320|gb|EFH50742.1| hypothetical protein ARALYDRAFT_489694 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 780 bits (2014), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/479 (77%), Positives = 414/479 (86%), Gaps = 15/479 (3%)
Query: 1 MENPN-WSMVELEAPSEEDFLRAEHHTAAPANKTRNRNAKQLTWVLLLKAHKAAGCLTSI 59
MENPN WSMVELE+PS +DFL H K+RN+NA+QLTWVLLLKAH+AAGCLTS+
Sbjct: 26 MENPNNWSMVELESPSHDDFLVRTHE------KSRNKNARQLTWVLLLKAHRAAGCLTSL 79
Query: 60 ASAFFSLGSLVRRRVAAGRTDQPPTSADTHEIQK--LRTRFFYSCIKLFLWLSVVLFAFE 117
SA +LG+ VRRR+AAGRTD +S+ + Q +++ FYSC+K+FLWLS++L FE
Sbjct: 80 GSALIALGTAVRRRIAAGRTDTEISSSSGVQKQNPAKKSKLFYSCLKVFLWLSLILLGFE 139
Query: 118 LCAYFKGWHFATPNLQLQYIFQSPLAIKGAFDLLYSSWVLVRVHYLAPPLQFLANACIVL 177
+ AYFKGWHF T LQLQ+IF KG FD +Y+ WVL+RV YLAPPLQFLAN CIVL
Sbjct: 140 IAAYFKGWHFGTSKLQLQFIFN-----KGFFDWVYTRWVLLRVEYLAPPLQFLANGCIVL 194
Query: 178 FLIQSLDRLILCLGCFWIRFKRIKPVPKHDDTSDLESGQKG-FFPMVLVQIPMCNEKEVY 236
FL+QSLDRLILCLGCFWIRFK+IKPVPK D SDLESG G F PMVLVQIPMCNEKEVY
Sbjct: 195 FLVQSLDRLILCLGCFWIRFKKIKPVPKPDSISDLESGDNGAFLPMVLVQIPMCNEKEVY 254
Query: 237 QQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYK 296
QQSIAAVCNLDWPK KILIQ+LDDSDDP Q+LIKEEV KWQ GA IVYRHR+ R+GYK
Sbjct: 255 QQSIAAVCNLDWPKGKILIQILDDSDDPITQSLIKEEVHKWQNQGARIVYRHRVNREGYK 314
Query: 297 AGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDE 356
AGNLKSAMNCSYVKDYEFVAIFDADFQP PDFL++T+PHFKDNEELGLVQARWSFVNK+E
Sbjct: 315 AGNLKSAMNCSYVKDYEFVAIFDADFQPLPDFLKKTIPHFKDNEELGLVQARWSFVNKEE 374
Query: 357 NLLTRLQDINLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEDSGGWMERTTVEDMDI 416
NLLTRLQ+INL+FHFEVEQQVN VF+NFFGFNGTAGVWRIKALEDSGGW+ERTTVEDMDI
Sbjct: 375 NLLTRLQNINLAFHFEVEQQVNSVFLNFFGFNGTAGVWRIKALEDSGGWLERTTVEDMDI 434
Query: 417 AVRAHLRGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRAKVYI 475
AVRAHL GWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLP +I++K+ I
Sbjct: 435 AVRAHLHGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPAVIKSKISI 493
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356510626|ref|XP_003524038.1| PREDICTED: probable xyloglucan glycosyltransferase 12-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 771 bits (1990), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/480 (76%), Positives = 411/480 (85%), Gaps = 6/480 (1%)
Query: 1 MENPNWSMVELEAPSEEDFLRAEHHTAAPA-NKTRNRNAKQLTWVLLLKAHKAAGCLTSI 59
MENPNWSMVELE P EED + ++ + +K R +NAKQLTWVLLLKAH+AAGCLTS+
Sbjct: 23 MENPNWSMVELEGPEEEDLMLTNSPSSGVSRDKGRGKNAKQLTWVLLLKAHRAAGCLTSL 82
Query: 60 ASAFFSLGSLVRRRVAAGRTDQPPTSADTHEIQKLRTRFFYSCIKLFLWLSVVLFAFELC 119
A A L + V+RRVAAG+TD +E ++TRF YSCIKLFL LSVVL FE+
Sbjct: 83 APALVGLVAAVKRRVAAGKTDADTGGGRENENPAVKTRF-YSCIKLFLCLSVVLLVFEIA 141
Query: 120 AYFKGWHFATPNLQLQYIFQSP-LAIKGAFDLLYSSWVLVRVHYLAPPLQFLANACIVLF 178
AYF+GW+F QL+++ +P +KG FD LY+ WV VRV YLAPPLQFL NACIVLF
Sbjct: 142 AYFEGWYFGAARFQLEHLLWAPSFGVKGFFDWLYARWVFVRVEYLAPPLQFLTNACIVLF 201
Query: 179 LIQSLDRLILCLGCFWIRFKRIKPVPKHDDTSDLESGQK---GFFPMVLVQIPMCNEKEV 235
LIQS+DRL+LCLGCFWIRFK+IKPVPK DLESG++ F PMVLVQIPMCNEKEV
Sbjct: 202 LIQSMDRLVLCLGCFWIRFKKIKPVPKGGGVVDLESGEEKGFSFSPMVLVQIPMCNEKEV 261
Query: 236 YQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGY 295
YQQSIAAVCNLDWPK K+LIQVLDDSDDPT Q+LIKEEV KWQ+ GANI+YRHR++RDGY
Sbjct: 262 YQQSIAAVCNLDWPKGKLLIQVLDDSDDPTTQSLIKEEVQKWQQEGANILYRHRVIRDGY 321
Query: 296 KAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKD 355
KAGNLKSAMNCSY+KDYEFVAIFDADFQP PDFL++TVPHFKDN++LGLVQARWSFVN+D
Sbjct: 322 KAGNLKSAMNCSYLKDYEFVAIFDADFQPTPDFLKKTVPHFKDNDDLGLVQARWSFVNRD 381
Query: 356 ENLLTRLQDINLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEDSGGWMERTTVEDMD 415
ENLLTRLQ+INLSFHFEVEQQVNG+FINFFGFNGTAGVWRIK LED+GGW+ERTTVEDMD
Sbjct: 382 ENLLTRLQNINLSFHFEVEQQVNGIFINFFGFNGTAGVWRIKTLEDAGGWLERTTVEDMD 441
Query: 416 IAVRAHLRGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRAKVYI 475
IAVRAHL GWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRAK+ +
Sbjct: 442 IAVRAHLHGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRAKISV 501
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 482 | ||||||
| TAIR|locus:2120532 | 699 | CSLC12 "Cellulose-synthase-lik | 0.962 | 0.663 | 0.746 | 6.1e-197 | |
| TAIR|locus:2124804 | 692 | CSLC5 "Cellulose-synthase-like | 0.898 | 0.625 | 0.623 | 4.1e-152 | |
| TAIR|locus:2046688 | 690 | ATCSLC08 [Arabidopsis thaliana | 0.933 | 0.652 | 0.607 | 4.7e-151 | |
| TAIR|locus:2079661 | 682 | CSLC6 "Cellulose-synthase-like | 0.919 | 0.649 | 0.584 | 4.6e-137 | |
| TAIR|locus:2089730 | 673 | CSLC04 "Cellulose-synthase-lik | 0.819 | 0.586 | 0.624 | 3e-133 | |
| TAIR|locus:2162494 | 534 | CSLA02 "cellulose synthase-lik | 0.651 | 0.588 | 0.487 | 1.8e-80 | |
| TAIR|locus:2058729 | 556 | CSLA07 "cellulose synthase lik | 0.655 | 0.568 | 0.487 | 2e-79 | |
| TAIR|locus:2028862 | 556 | CSLA03 "cellulose synthase-lik | 0.668 | 0.579 | 0.466 | 7.9e-78 | |
| TAIR|locus:2130844 | 553 | CSLA01 "cellulose synthase-lik | 0.753 | 0.656 | 0.448 | 7.1e-77 | |
| TAIR|locus:2144638 | 533 | ATCSLA09 [Arabidopsis thaliana | 0.651 | 0.589 | 0.474 | 9e-77 |
| TAIR|locus:2120532 CSLC12 "Cellulose-synthase-like C12" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1907 (676.4 bits), Expect = 6.1e-197, P = 6.1e-197
Identities = 359/481 (74%), Positives = 404/481 (83%)
Query: 1 MENPN-WSMVELEAPSEEDFLRAEHHTAAPANKTRNRNAKQLTWVLLLKAHKAAGCLTSI 59
MENPN WSMVELE+PS +DFL H K+RN+NA+QLTWVLLLKAH+AAGCLTS+
Sbjct: 26 MENPNNWSMVELESPSHDDFLVRTHE------KSRNKNARQLTWVLLLKAHRAAGCLTSL 79
Query: 60 ASAFFSLGSLVRRRVAAGRTDQPPTSADTHEIQKL----RTRFFYSCIKLFLWLSVVLFA 115
SA F+LG+ VRRR+AAGRTD +S+ +QK +++ FYSC+K+FLWLS++L
Sbjct: 80 GSALFALGTAVRRRIAAGRTDIEISSSGVGSLQKQNHTKKSKLFYSCLKVFLWLSLILLG 139
Query: 116 FELCAYFKGWHFATPNLQLQYIFQSPLAIKGAFDLLYSSWVLVRVHYLAPPLQFLANACI 175
FE+ AYFKGW F T LQLQ+IF KG FD +Y+ WVL+RV YLAPPLQFLAN CI
Sbjct: 140 FEIAAYFKGWSFGTSKLQLQFIFN-----KGFFDWVYTRWVLLRVEYLAPPLQFLANGCI 194
Query: 176 VLFLIQSLDRLILCLGCFWIRFKRIKPVPKHDDTSDLESGQKG-FFPMVLVQIPMCNEKE 234
VLFL+QSLDRLILCLGCFWIRFK+IKPVPK D SDLESG G F PMVLVQIPMCNEKE
Sbjct: 195 VLFLVQSLDRLILCLGCFWIRFKKIKPVPKPDSISDLESGDNGAFLPMVLVQIPMCNEKE 254
Query: 235 VYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDG 294
VYQQSIAAVCNLDWPK KILIQ+LDDSDDP Q+LIKEEV KWQ+ GA IVYRHR+ R+G
Sbjct: 255 VYQQSIAAVCNLDWPKGKILIQILDDSDDPITQSLIKEEVHKWQKLGARIVYRHRVNREG 314
Query: 295 YKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNK 354
YKAGNLKSAMNCSYVKDYEFVAIFDADFQP PDFL++T+PHFKDNEE+GLVQARWSFVNK
Sbjct: 315 YKAGNLKSAMNCSYVKDYEFVAIFDADFQPLPDFLKKTIPHFKDNEEIGLVQARWSFVNK 374
Query: 355 DENLLTRLQDINLSFHFEVEQQXXXXXXXXXXXXXTAGVWRIKALEDSGGWMERTTVEDM 414
+ENLLTRLQ+INL+FHFEVEQQ TAGVWRIKALEDSGGW+ERTTVEDM
Sbjct: 375 EENLLTRLQNINLAFHFEVEQQVNSVFLNFFGFNGTAGVWRIKALEDSGGWLERTTVEDM 434
Query: 415 DIAVRAHLRGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRAKVY 474
DIAVRAHL GWKF+FLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLP +I++K+
Sbjct: 435 DIAVRAHLHGWKFVFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPAVIKSKIS 494
Query: 475 I 475
I
Sbjct: 495 I 495
|
|
| TAIR|locus:2124804 CSLC5 "Cellulose-synthase-like C5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1484 (527.5 bits), Expect = 4.1e-152, P = 4.1e-152
Identities = 282/452 (62%), Positives = 349/452 (77%)
Query: 29 PANKTRNRNAKQLTWVLLLKAHKAAGCLTSIASAFFSLGSLVRRRVAAGRTDQPPTSADT 88
P K+R +NAKQ+TWVLLLKAH+A GCLT +A+ F+SL +++R++ T
Sbjct: 44 PVEKSRGKNAKQVTWVLLLKAHRAVGCLTWLATVFWSLLGAIKKRLSF-----------T 92
Query: 89 HEI--QKL-RTRFFYSCIKLFLWLSVVLFAFELCAYFKGWH-FATPNLQLQYIFQSPLAI 144
H + +KL R R+ ++ IKLFL +S+V+ FE+ AYF+GWH F +P+L +I S L I
Sbjct: 93 HPLGSEKLGRDRWLFTAIKLFLAVSLVILGFEIVAYFRGWHYFQSPSL---HIPTSTLEI 149
Query: 145 KGAFDLLYSSWVLVRVHYLAPPLQFLANACIVLFLIQSLDRLILCLGCFWIRFKRIKP-V 203
+ F L+Y W+ +R Y+APP++ L+ CIVLFLIQS+DRL+LCLGCFWI++K+IKP
Sbjct: 150 QSLFHLVYVGWLTLRADYIAPPIKALSKFCIVLFLIQSVDRLVLCLGCFWIKYKKIKPRF 209
Query: 204 PKHDDTSDLESGQKGFFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDD 263
+ +D G +PMVLVQIPMCNE+EVY+QSI+AVC LDWPK +IL+QVLDDS+D
Sbjct: 210 DEEPFRNDDAEGSGSEYPMVLVQIPMCNEREVYEQSISAVCQLDWPKDRILVQVLDDSND 269
Query: 264 PTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQ 323
+ Q LIK EV KW + G NI+YRHR++R GYKAGNLKSAM+C YV+ YE+VAIFDADFQ
Sbjct: 270 ESIQQLIKAEVAKWSQKGVNIIYRHRLVRTGYKAGNLKSAMSCDYVEAYEYVAIFDADFQ 329
Query: 324 PNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQQXXXXXXX 383
P PDFL+ TVPHFKDN ELGLVQARW+FVNKDENLLTRLQ+INL FHFEVEQQ
Sbjct: 330 PTPDFLKLTVPHFKDNPELGLVQARWTFVNKDENLLTRLQNINLCFHFEVEQQVNGVFLN 389
Query: 384 XXXXXXTAGVWRIKALEDSGGWMERTTVEDMDIAVRAHLRGWKFIFLNDVECQCELPESY 443
TAGVWRIKALE+SGGW+ERTTVEDMDIAVRAHL GWKFI+LNDV+ CE+PESY
Sbjct: 390 FFGFNGTAGVWRIKALEESGGWLERTTVEDMDIAVRAHLHGWKFIYLNDVKVLCEVPESY 449
Query: 444 EAYRKQQHRWHSGPMQLFRLCLPDIIRAKVYI 475
EAY+KQQHRWHSGPMQLFRLCL I+ +K+ I
Sbjct: 450 EAYKKQQHRWHSGPMQLFRLCLGSILTSKIAI 481
|
|
| TAIR|locus:2046688 ATCSLC08 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1474 (523.9 bits), Expect = 4.7e-151, P = 4.7e-151
Identities = 288/474 (60%), Positives = 354/474 (74%)
Query: 8 MVELEAPSEEDFLRAEHHTAA--PANKTRNRNAKQLTWVLLLKAHKAAGCLTSIASAFFS 65
+V++E P+ + E +A P K+R +NAKQ+TWVLLLKAHKA GCLT +A+ F+S
Sbjct: 22 VVKMENPNYS-IVEVEEPDSAFQPMEKSRGKNAKQVTWVLLLKAHKAVGCLTWVATVFWS 80
Query: 66 LGSLVRRRVAAGRTDQPPTSADTHEI--QKL-RTRFFYSCIKLFLWLSVVLFAFELCAYF 122
L V+RR++ TH + ++L R + +S IKLFL S+ + AFEL AY+
Sbjct: 81 LLGSVKRRLSF-----------THPLGSERLGRDGWLFSAIKLFLVASLAILAFELVAYY 129
Query: 123 KGWH-FATPNLQLQYIFQSPLAIKGAFDLLYSSWVLVRVHYLAPPLQFLANACIVLFLIQ 181
+GWH F PNL +I S L I+ L Y W+ +R Y+APP++ L+ CIVLFL+Q
Sbjct: 130 RGWHYFKNPNL---HIPTSKLEIQSLLHLFYVGWLSLRADYIAPPIKALSKFCIVLFLVQ 186
Query: 182 SLDRLILCLGCFWIRFKRIKPV--PKHDDTSDLESGQKGFFPMVLVQIPMCNEKEVYQQS 239
S+DRLILCLGC WI+FK+IKP +H D E G +PMVLVQIPMCNE+EVY+QS
Sbjct: 187 SVDRLILCLGCLWIKFKKIKPRIDEEHFRNDDFE-GSGSEYPMVLVQIPMCNEREVYEQS 245
Query: 240 IAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGN 299
I+AVC LDWPK ++L+QVLDDSDD + Q LI++EV KW + G NI+YRHR++R GYKAGN
Sbjct: 246 ISAVCQLDWPKDRLLVQVLDDSDDESIQELIRDEVTKWSQKGVNIIYRHRLVRTGYKAGN 305
Query: 300 LKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLL 359
LKSAM+C YV+ YEFVAIFDADFQPN DFL+ TVPHFK+ ELGLVQARW+FVNKDENLL
Sbjct: 306 LKSAMSCDYVEAYEFVAIFDADFQPNSDFLKLTVPHFKEKPELGLVQARWAFVNKDENLL 365
Query: 360 TRLQDINLSFHFEVEQQXXXXXXXXXXXXXTAGVWRIKALEDSGGWMERTTVEDMDIAVR 419
TRLQ+INL FHFEVEQQ TAGVWRIKALE+SGGW+ERTTVEDMDIAVR
Sbjct: 366 TRLQNINLCFHFEVEQQVNGVFLNFFGFNGTAGVWRIKALEESGGWLERTTVEDMDIAVR 425
Query: 420 AHLRGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRAKV 473
AHL GWKFI+LNDV+ CE+PESYEAY+KQQHRWHSGPMQLFRLCL I+ +K+
Sbjct: 426 AHLHGWKFIYLNDVKVLCEVPESYEAYKKQQHRWHSGPMQLFRLCLRSILTSKI 479
|
|
| TAIR|locus:2079661 CSLC6 "Cellulose-synthase-like C6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1342 (477.5 bits), Expect = 4.6e-137, P = 4.6e-137
Identities = 274/469 (58%), Positives = 332/469 (70%)
Query: 11 LEAPSEEDFLRAEHHTAAPANKTRNRNAKQLTWVLLLKAHKAAGCLTSIASAFFSLGS-- 68
L A +E FL E T A + ++R + T L + + +AS+F +G+
Sbjct: 25 LYAGDDEAFLTVEIRTPATVDPDKDR-IRTRTVRQLSRLYLLK--FKQLASSFLWIGNSF 81
Query: 69 LVRRRVAAGR--TDQPPTSADTHEIQKLRTRFFYSCIKLFLWLSVVLFAFELCAYFKGWH 126
L R A R D PP+ + + + +L IK FL + V+L FEL AYFKGWH
Sbjct: 82 LYLVRTANRRIANDNPPSVSSSARLYRL--------IKGFLVVVVLLLCFELAAYFKGWH 133
Query: 127 FATPNLQLQYIFQSPLAIKGAFDLLYSSWVLVRVHYLAPPLQFLANACIVLFLIQSLDRL 186
F P+ + + +A+ +++Y+ W+ +R YLAPPLQ L N CIVLFLIQS+DRL
Sbjct: 134 FTPPS-----VASAEVAV----EVVYAWWLEIRASYLAPPLQSLTNVCIVLFLIQSVDRL 184
Query: 187 ILCLGCFWIRFKRIKPVPKHDDTSDL--ESGQKGFFPMVLVQIPMCNEKEVYQQSIAAVC 244
+L LGCFWI+ +RIKPV + + L E + +PMV+VQIPMCNEKEVYQQSI AVC
Sbjct: 185 VLVLGCFWIKLRRIKPVASMEYPTKLVGEGVRLEDYPMVIVQIPMCNEKEVYQQSIGAVC 244
Query: 245 NLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAM 304
LDWP+ ++L+QVLDDS + Q LIK EV KWQ+ G IVYRHR++R GYKAGNLK+AM
Sbjct: 245 MLDWPRERMLVQVLDDSSELDVQQLIKAEVQKWQQRGVRIVYRHRLIRTGYKAGNLKAAM 304
Query: 305 NCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQD 364
NC YVKDYEFVAIFDADFQP DFL++TVPHFK NEEL LVQ RW+FVNKDENLLTRLQ+
Sbjct: 305 NCEYVKDYEFVAIFDADFQPPADFLKKTVPHFKGNEELALVQTRWAFVNKDENLLTRLQN 364
Query: 365 INLSFHFEVEQQXXXXXXXXXXXXXTAGVWRIKALEDSGGWMERTTVEDMDIAVRAHLRG 424
INLSFHFEVEQQ TAGVWRIKALED GGW+ERTTVEDMDIAVRAHL G
Sbjct: 365 INLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEDCGGWLERTTVEDMDIAVRAHLCG 424
Query: 425 WKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRAKV 473
WKFI+LNDV+C CELPESYEAY+KQQ+RWHSGPMQLFRLC DI+R+KV
Sbjct: 425 WKFIYLNDVKCLCELPESYEAYKKQQYRWHSGPMQLFRLCFFDILRSKV 473
|
|
| TAIR|locus:2089730 CSLC04 "Cellulose-synthase-like C4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1306 (464.8 bits), Expect = 3.0e-133, P = 3.0e-133
Identities = 256/410 (62%), Positives = 301/410 (73%)
Query: 66 LGSLVRRRVAAGRTDQPPTSADTHEIQKLRTRFFYSCIKLFLWLSVVLFAFELCAYFKGW 125
L S V++R+A + + E K R + Y IK L +S++ + E+ A+FK W
Sbjct: 59 LVSSVKKRIAFSAKN-----INEEEDPKSRGKQMYRFIKACLVISIIALSIEIVAHFKKW 113
Query: 126 HFATPNLQLQYIFQSPLAIKGAFDLLYSSWVLVRVHYLAPPLQFLANACIVLFLIQSLDR 185
NL L I + + G + Y +W+ R Y+AP + L+ C VLFLIQSLDR
Sbjct: 114 -----NLDL--INRPSWEVYGLVEWSYMAWLSFRSDYIAPLVISLSRFCTVLFLIQSLDR 166
Query: 186 LILCLGCFWIRFKRIKPVPKHDDTSDLESGQKGFFPMVLVQIPMCNEKEVYQQSIAAVCN 245
L+LCLGCFWI+FK+I+P +++ DLE FPMVL+QIPMCNE+EVY+QSI A
Sbjct: 167 LVLCLGCFWIKFKKIEP-KLTEESIDLEDPSS--FPMVLIQIPMCNEREVYEQSIGAASQ 223
Query: 246 LDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMN 305
LDWPK +ILIQVLDDSDDP Q LIKEEV W E G NI+YRHR++R GYKAGNLKSAM
Sbjct: 224 LDWPKDRILIQVLDDSDDPNLQLLIKEEVSVWAEKGVNIIYRHRLIRTGYKAGNLKSAMT 283
Query: 306 CSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDI 365
C YVKDYEFV IFDADF PNPDFL++TVPHFK N ELGLVQARWSFVNKDENLLTRLQ+I
Sbjct: 284 CDYVKDYEFVTIFDADFTPNPDFLKKTVPHFKGNPELGLVQARWSFVNKDENLLTRLQNI 343
Query: 366 NLSFHFEVEQQXXXXXXXXXXXXXTAGVWRIKALEDSGGWMERTTVEDMDIAVRAHLRGW 425
NL FHFEVEQQ TAGVWRIKALE+SGGW+ERTTVEDMDIAVRAHL GW
Sbjct: 344 NLCFHFEVEQQVNGVFLNFFGFNGTAGVWRIKALEESGGWLERTTVEDMDIAVRAHLNGW 403
Query: 426 KFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRAKVYI 475
KFI+LNDVE CELPESYEAY+KQQHRWHSGPMQLFRLCLP II++K+ +
Sbjct: 404 KFIYLNDVEVTCELPESYEAYKKQQHRWHSGPMQLFRLCLPSIIKSKISV 453
|
|
| TAIR|locus:2162494 CSLA02 "cellulose synthase-like A02" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 808 (289.5 bits), Expect = 1.8e-80, P = 1.8e-80
Identities = 158/324 (48%), Positives = 210/324 (64%)
Query: 155 WVLVRVHYLAPPLQFLANACIVLFLIQSLDRL-----ILCLGCFWIR-FKRIKPVPKHDD 208
W LV+ + P LQ C+++ ++ +R+ I+ + FW + KR K P HDD
Sbjct: 29 WELVKAPVIVPLLQLAVYICLLMSVMLLCERVYMGIVIVLVKLFWKKPDKRYKFEPIHDD 88
Query: 209 TSDLESGQKGFFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQT 268
E G F P+VLVQIPM NE+EVY+ SI A C L WP +++IQVLDDS DPT +
Sbjct: 89 E---ELGSSNF-PVVLVQIPMFNEREVYKLSIGAACGLSWPSDRLVIQVLDDSTDPTVKQ 144
Query: 269 LIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDF 328
+++ E +W G NI Y+ R R GYKAG LK + SYVK E+V IFDADFQP PDF
Sbjct: 145 MVEVECQRWASKGINIRYQIRENRVGYKAGALKEGLKRSYVKHCEYVVIFDADFQPEPDF 204
Query: 329 LRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQQXXXXXXXXXXXX 388
LRR++P N + LVQARW FVN DE LLTR+Q+++L +HF VEQ+
Sbjct: 205 LRRSIPFLMHNPNIALVQARWRFVNSDECLLTRMQEMSLDYHFTVEQEVGSSTHAFFGFN 264
Query: 389 XTAGVWRIKALEDSGGWMERTTVEDMDIAVRAHLRGWKFIFLNDVECQCELPESYEAYRK 448
TAG+WRI A+ ++GGW +RTTVEDMD+AVRA LRGWKF++L D++ + ELP ++ A+R
Sbjct: 265 GTAGIWRIAAINEAGGWKDRTTVEDMDLAVRASLRGWKFLYLGDLQVKSELPSTFRAFRF 324
Query: 449 QQHRWHSGPMQLFRLCLPDIIRAK 472
QQHRW GP LFR + +I+R K
Sbjct: 325 QQHRWSCGPANLFRKMVMEIVRNK 348
|
|
| TAIR|locus:2058729 CSLA07 "cellulose synthase like" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 798 (286.0 bits), Expect = 2.0e-79, P = 2.0e-79
Identities = 157/322 (48%), Positives = 216/322 (67%)
Query: 155 WVLVRVHYLAPPLQFLANACIVLFLIQSLDRLILCLGCFWIR-FKRIKPVP--KHDDTSD 211
W L+R + P +FL C+V+ ++ ++ + + + +++ FKR KP K + D
Sbjct: 51 WQLIRAVVVVPVFKFLVLLCLVMSVMFFVEVMYMGIVVLYVKLFKR-KPEKFYKWEAMED 109
Query: 212 -LESGQKGFFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLI 270
+E G + PMVLVQIPM NEKEV +QSIAA C + WP ++I+IQVLDDS DP ++ L+
Sbjct: 110 DVECGSASY-PMVLVQIPMYNEKEVCEQSIAAACKISWPSNRIIIQVLDDSTDPASKELV 168
Query: 271 KEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLR 330
K+E +W + G NI + R R+GYKAG L+ M SYVK ++VAIFDADFQP+PDFL
Sbjct: 169 KKECDRWSKEGVNITFEIRDNRNGYKAGALREGMRHSYVKQCDYVAIFDADFQPDPDFLH 228
Query: 331 RTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQQXXXXXXXXXXXXXT 390
RTVP N +L LVQ RW FVN + ++TRLQ+++LS+HF +EQQ T
Sbjct: 229 RTVPFLIHNPKLALVQGRWEFVNAGQCMMTRLQEMSLSYHFTIEQQVGSSTFAFFGFNGT 288
Query: 391 AGVWRIKALEDSGGWMERTTVEDMDIAVRAHLRGWKFIFLNDVECQCELPESYEAYRKQQ 450
AGVWRI AL +SGGW ++TTVEDMD+AVRA LRGWKF++++D++ + ELP S++A R QQ
Sbjct: 289 AGVWRISALNESGGWNDQTTVEDMDLAVRATLRGWKFLYIDDLKVKSELPCSFKALRSQQ 348
Query: 451 HRWHSGPMQLFRLCLPDIIRAK 472
HRW GP L R IIR++
Sbjct: 349 HRWTCGPANLLRKMAGQIIRSE 370
|
|
| TAIR|locus:2028862 CSLA03 "cellulose synthase-like A3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 783 (280.7 bits), Expect = 7.9e-78, P = 7.9e-78
Identities = 153/328 (46%), Positives = 210/328 (64%)
Query: 149 DLLYSSWVLVRVHYLAPPLQFLANACIVLFLIQSLDRLILCLGCFWIRFKRIKPVPKHD- 207
+++Y W R+ P L+ L C+V+ L+ ++R+ + + +++ R P H
Sbjct: 46 EIIYI-WKQTRIFVFIPILKCLVTICLVMSLLLFIERVYMSIVVVFVKLLRRTPEKVHKW 104
Query: 208 ---DTSDLESGQKGFFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDP 264
+ DLE + PMVL+QIPM NEKEV Q SI A C L WP ++++QVLDDS DP
Sbjct: 105 EPINDDDLELANTNY-PMVLIQIPMYNEKEVCQLSIGAACRLSWPLDRMIVQVLDDSTDP 163
Query: 265 TAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQP 324
++ L+ E KW G NI+ R R GYKAG LK+ M +YVK EFVAIFDADFQP
Sbjct: 164 ASKELVNAECDKWARKGINIMSEIRDNRIGYKAGALKAGMMHNYVKQCEFVAIFDADFQP 223
Query: 325 NPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQQXXXXXXXX 384
+PDFL RT+P N E+ LVQ RW FVN +E L+TR+Q+++L++HF EQ+
Sbjct: 224 DPDFLERTIPFLIHNHEISLVQCRWKFVNANECLMTRMQEMSLNYHFVAEQESGSSIHAF 283
Query: 385 XXXXXTAGVWRIKALEDSGGWMERTTVEDMDIAVRAHLRGWKFIFLNDVECQCELPESYE 444
TAGVWRI AL ++GGW +RTTVEDMD+AVRA L GWKF++++DVE + ELP +++
Sbjct: 284 FGFNGTAGVWRIAALNEAGGWKDRTTVEDMDLAVRACLHGWKFVYVHDVEVKNELPSTFK 343
Query: 445 AYRKQQHRWHSGPMQLFRLCLPDIIRAK 472
AYR QQHRW GP L+R +I++ K
Sbjct: 344 AYRFQQHRWSCGPANLWRKMTMEILQNK 371
|
|
| TAIR|locus:2130844 CSLA01 "cellulose synthase-like A01" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 774 (277.5 bits), Expect = 7.1e-77, P = 7.1e-77
Identities = 167/372 (44%), Positives = 223/372 (59%)
Query: 103 IKLFLWLSVVLFAFELCAYFKGWHFA-TPNLQLQYIFQSPLAIKGAFDLLYSSWVLVRVH 161
+K FL+L + L F GW T Q + A L Y W R
Sbjct: 5 LKPFLFLYDTTLSL-LLLLFNGWSLEDTAAAQKRREADKNAAETEWIQLQYL-WTKTRSV 62
Query: 162 YLAPPLQFLANACIVLFLIQSLDRLILCLGCFWIR-FKRIKP--VPKHDDTS-DLESGQK 217
L P + L C+VL +I + + +++ FKR KP V K + D+E G
Sbjct: 63 VLLPVFKGLVVMCLVLSIIVFFESFYMNFVILFVKLFKR-KPHKVYKWEAMQEDVEVGPD 121
Query: 218 GFFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKW 277
+ PMVL+QIPM NEKEV+Q SIAA+C+L WP S++++QV+DDS DP + + E+ KW
Sbjct: 122 NY-PMVLIQIPMYNEKEVFQLSIAAICSLVWPSSRLVVQVVDDSTDPAVREGVDVEIAKW 180
Query: 278 QEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFK 337
Q G NI R R+GYKAG +K A+ SYVK +FVA+FDADFQP PD+L R VP
Sbjct: 181 QSQGINIRCERRDNRNGYKAGAMKEALTQSYVKQCDFVAVFDADFQPEPDYLIRAVPFLV 240
Query: 338 DNEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQQXXXXXXXXXXXXXTAGVWRIK 397
N ++ LVQARW FVN ++ L+TR+Q+++L++HF+VEQ+ TAGVWRI
Sbjct: 241 HNPDVALVQARWIFVNANKCLMTRMQEMSLNYHFKVEQESGSTRHAFFGFNGTAGVWRIS 300
Query: 398 ALEDSGGWMERTTVEDMDIAVRAHLRGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGP 457
A+E +GGW RTTVEDMD+AVR L GWKF++LND+ + ELP ++AYR QQHRW GP
Sbjct: 301 AMEAAGGWKSRTTVEDMDLAVRVGLHGWKFVYLNDLTVRNELPSKFKAYRFQQHRWSCGP 360
Query: 458 MQLFRLCLPDII 469
LFR +II
Sbjct: 361 ANLFRKMTMEII 372
|
|
| TAIR|locus:2144638 ATCSLA09 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 773 (277.2 bits), Expect = 9.0e-77, P = 9.0e-77
Identities = 151/318 (47%), Positives = 205/318 (64%)
Query: 158 VRVHYLAPPLQFLANACIVLFLIQSLDRLILCLGCFWIRFKRIKPVP--KHDDTSD-LES 214
+R + P L+ C+ + ++ ++R+ + + ++ KP K++ D +E
Sbjct: 32 IRAPLIVPALRLGVYICLTMSVMLFVERVYMGIVISLVKLFGRKPDKRFKYEPIKDDIEL 91
Query: 215 GQKGFFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEV 274
G + PMVL+QIPM NE+EVYQ SI A C L WP +I+IQVLDDS DPT + L++ E
Sbjct: 92 GNSAY-PMVLIQIPMFNEREVYQLSIGAACGLSWPSDRIVIQVLDDSTDPTIKDLVEMEC 150
Query: 275 LKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVP 334
+W G NI Y R R+GYKAG LK M SYVK ++VAIFDADFQP DFL RTVP
Sbjct: 151 SRWASKGVNIKYEIRDNRNGYKAGALKEGMKKSYVKSCDYVAIFDADFQPEADFLWRTVP 210
Query: 335 HFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQQXXXXXXXXXXXXXTAGVW 394
+ N +L LVQARW FVN DE L+TR+Q+++L +HF VEQ+ TAG+W
Sbjct: 211 YLLHNPKLALVQARWKFVNSDECLMTRMQEMSLDYHFTVEQEVGSSTYAFFGFNGTAGIW 270
Query: 395 RIKALEDSGGWMERTTVEDMDIAVRAHLRGWKFIFLNDVECQCELPESYEAYRKQQHRWH 454
RI AL ++GGW +RTTVEDMD+AVRA L+GWKF++L ++ + ELP +++AYR QQHRW
Sbjct: 271 RISALNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLGSLKVKNELPSTFKAYRYQQHRWS 330
Query: 455 SGPMQLFRLCLPDIIRAK 472
GP LFR +I+ K
Sbjct: 331 CGPANLFRKMAFEIMTNK 348
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q9ZQB9 | CSLCC_ARATH | 2, ., 4, ., 1, ., - | 0.7692 | 0.9626 | 0.6638 | yes | no |
| Q6L538 | CSLC7_ORYSJ | 2, ., 4, ., 1, ., - | 0.68 | 0.9439 | 0.6613 | yes | no |
| Q6AU53 | CSLC9_ORYSJ | 2, ., 4, ., 1, ., - | 0.7664 | 0.7676 | 0.6218 | yes | no |
| Q8LIY0 | CSLC1_ORYSJ | 2, ., 4, ., 1, ., - | 0.6749 | 0.9522 | 0.6652 | yes | no |
| Q84Z01 | CSLCA_ORYSJ | 2, ., 4, ., 1, ., - | 0.6895 | 0.9232 | 0.6486 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 482 | |||
| cd06437 | 232 | cd06437, CESA_CaSu_A2, Cellulose synthase catalyti | 1e-119 | |
| cd06421 | 234 | cd06421, CESA_CelA_like, CESA_CelA_like are involv | 3e-52 | |
| COG1215 | 439 | COG1215, COG1215, Glycosyltransferases, probably i | 5e-41 | |
| cd06423 | 180 | cd06423, CESA_like, CESA_like is the cellulose syn | 3e-35 | |
| cd06435 | 236 | cd06435, CESA_NdvC_like, NdvC_like proteins in thi | 1e-33 | |
| TIGR03030 | 713 | TIGR03030, CelA, cellulose synthase catalytic subu | 3e-30 | |
| pfam13641 | 229 | pfam13641, Glyco_tranf_2_3, Glycosyltransferase li | 7e-27 | |
| cd06427 | 241 | cd06427, CESA_like_2, CESA_like_2 is a member of t | 1e-25 | |
| PRK11498 | 852 | PRK11498, bcsA, cellulose synthase catalytic subun | 3e-19 | |
| pfam13632 | 194 | pfam13632, Glyco_trans_2_3, Glycosyl transferase f | 1e-15 | |
| pfam00535 | 168 | pfam00535, Glycos_transf_2, Glycosyl transferase f | 4e-15 | |
| PRK11204 | 420 | PRK11204, PRK11204, N-glycosyltransferase; Provisi | 3e-12 | |
| TIGR03937 | 407 | TIGR03937, PgaC_IcaA, poly-beta-1,6 N-acetyl-D-glu | 5e-11 | |
| pfam13506 | 171 | pfam13506, Glyco_transf_21, Glycosyl transferase f | 3e-10 | |
| cd06439 | 251 | cd06439, CESA_like_1, CESA_like_1 is a member of t | 1e-09 | |
| PRK14583 | 444 | PRK14583, hmsR, N-glycosyltransferase; Provisional | 2e-09 | |
| cd00761 | 156 | cd00761, Glyco_tranf_GTA_type, Glycosyltransferase | 2e-09 | |
| cd04191 | 254 | cd04191, Glucan_BSP_ModH, Glucan_BSP_ModH catalyze | 4e-06 | |
| cd06436 | 191 | cd06436, GlcNAc-1-P_transferase, N-acetyl-glucosam | 1e-05 | |
| cd06438 | 183 | cd06438, EpsO_like, EpsO protein participates in t | 2e-05 | |
| TIGR03965 | 467 | TIGR03965, mycofact_glyco, mycofactocin system gly | 0.001 | |
| cd06434 | 235 | cd06434, GT2_HAS, Hyaluronan synthases catalyze po | 0.002 | |
| cd02520 | 196 | cd02520, Glucosylceramide_synthase, Glucosylcerami | 0.003 |
| >gnl|CDD|133059 cd06437, CESA_CaSu_A2, Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex | Back alignment and domain information |
|---|
Score = 347 bits (892), Expect = e-119
Identities = 120/237 (50%), Positives = 154/237 (64%), Gaps = 5/237 (2%)
Query: 221 PMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEA 280
PMV VQ+P+ NEK V ++ I A C LD+PK ++ IQVLDDS D T + E V ++
Sbjct: 1 PMVTVQLPVFNEKYVVERLIEAACALDYPKDRLEIQVLDDSTDETVRLAR-EIVEEYAAQ 59
Query: 281 GANIVYRHRILRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNE 340
G NI + R R GYKAG L M V E+VAIFDADF P PDFL++T P+F D +
Sbjct: 60 GVNIKHVRRADRTGYKAGALAEGMK---VAKGEYVAIFDADFVPPPDFLQKTPPYFADPK 116
Query: 341 ELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALE 400
LG VQ RW +N + +LLTR+Q ++L +HF +EQ FF FNGTAGVWR + +E
Sbjct: 117 -LGFVQTRWGHINANYSLLTRVQAMSLDYHFTIEQVARSSTGLFFNFNGTAGVWRKECIE 175
Query: 401 DSGGWMERTTVEDMDIAVRAHLRGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGP 457
D+GGW T ED+D++ RA L+GWKF++L+DV ELP S AYR QQHRW GP
Sbjct: 176 DAGGWNHDTLTEDLDLSYRAQLKGWKFVYLDDVVVPAELPASMSAYRSQQHRWSKGP 232
|
Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants were significantly smaller, while the single mutant plants were almost normal. Length = 232 |
| >gnl|CDD|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose | Back alignment and domain information |
|---|
Score = 175 bits (447), Expect = 3e-52
Identities = 74/248 (29%), Positives = 118/248 (47%), Gaps = 21/248 (8%)
Query: 221 PMVLVQIPMCNEK-EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQE 279
P V V IP NE E+ ++++ A +D+P K+ + VLDD P E+
Sbjct: 1 PTVDVFIPTYNEPLEIVRKTLRAALAIDYPHDKLRVYVLDDGRRP--------ELRALAA 52
Query: 280 AGANIVYRHRILRD---GYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHF 336
+ R KAGNL +A+ + +FVAI DAD P PDFLRRT+ +F
Sbjct: 53 ELGVEYGYRYLTRPDNRHAKAGNLNNALAHT---TGDFVAILDADHVPTPDFLRRTLGYF 109
Query: 337 KDNEELGLVQARWSFVNKDENLLT---RLQDINLSFHFEVEQQVNGVFINFFGFNGTAGV 393
D+ ++ LVQ F N D + L F+ ++ + F G+ V
Sbjct: 110 LDDPKVALVQTPQFFYNPDPFDWLADGAPNEQEL-FYGVIQPGRDRWGAAFCC--GSGAV 166
Query: 394 WRIKALEDSGGWMERTTVEDMDIAVRAHLRGWKFIFLNDVECQCELPESYEAYRKQQHRW 453
R +AL++ GG+ + ED+ ++R H +GW+ +++ + PE+ AY KQ+ RW
Sbjct: 167 VRREALDEIGGFPTDSVTEDLATSLRLHAKGWRSVYVPEPLAAGLAPETLAAYIKQRLRW 226
Query: 454 HSGPMQLF 461
G +Q+
Sbjct: 227 ARGMLQIL 234
|
Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end. Length = 234 |
| >gnl|CDD|224136 COG1215, COG1215, Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 152 bits (384), Expect = 5e-41
Identities = 81/291 (27%), Positives = 132/291 (45%), Gaps = 18/291 (6%)
Query: 175 IVLFLIQSLDRLILCLGCFWIRFKRIKPVPKHDDTSDLESGQKGFFPMVLVQIPMCNE-K 233
++L LI S+ +L + D L P V V IP NE
Sbjct: 16 LILLLILSI-ITLLLGYLLLVLPLSRPRKKLPKDADKL-------LPKVSVIIPAYNEEP 67
Query: 234 EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRD 293
EV ++++ ++ + D+P+ ++++ V D S D T + L + E G N + ++
Sbjct: 68 EVLEETLESLLSQDYPRYEVIV-VDDGSTDETYEILEE----LGAEYGPNFRVIYPEKKN 122
Query: 294 GYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVN 353
G KAG L + + + + V I DAD P PD LR V F+D +V
Sbjct: 123 GGKAGALNNGLKRA---KGDVVVILDADTVPEPDALRELVSPFEDPPVGAVVGTPRIRNR 179
Query: 354 KD-ENLLTRLQDINLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEDSGGWMERTTVE 412
D NLL R+Q I F + +G++ +R ALE+ GGW+E T E
Sbjct: 180 PDPSNLLGRIQAIEYLSAFYFRLRAASKGGLISFLSGSSSAFRRSALEEVGGWLEDTITE 239
Query: 413 DMDIAVRAHLRGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRL 463
D D+ +R HLRG++ +++ + E PE+ + +Q+ RW G +Q+ L
Sbjct: 240 DADLTLRLHLRGYRVVYVPEAIVWTEAPETLKELWRQRLRWARGGLQVLLL 290
|
Length = 439 |
| >gnl|CDD|133045 cd06423, CESA_like, CESA_like is the cellulose synthase superfamily | Back alignment and domain information |
|---|
Score = 129 bits (326), Expect = 3e-35
Identities = 60/189 (31%), Positives = 92/189 (48%), Gaps = 9/189 (4%)
Query: 225 VQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANI 284
+ +P NE+ V +++I ++ LD+PK ++++ V D S D T + L + L
Sbjct: 1 IIVPAYNEEAVIERTIESLLALDYPKLEVIV-VDDGSTDDTLEILEELAALYI-----RR 54
Query: 285 VYRHRILRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGL 344
V R +G KAG L + + + + V + DAD PD L+R V F + ++G
Sbjct: 55 VLVVRDKENGGKAGALNAGLRHA---KGDIVVVLDADTILEPDALKRLVVPFFADPKVGA 111
Query: 345 VQARWSFVNKDENLLTRLQDINLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEDSGG 404
VQ R N ENLLTRLQ I F + ++ +G G +R +AL + GG
Sbjct: 112 VQGRVRVRNGSENLLTRLQAIEYLSIFRLGRRAQSALGGVLVLSGAFGAFRREALREVGG 171
Query: 405 WMERTTVED 413
W E T ED
Sbjct: 172 WDEDTLTED 180
|
The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the elongation of beta-1,2 polyglucose chains of Glucan. Length = 180 |
| >gnl|CDD|133057 cd06435, CESA_NdvC_like, NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase | Back alignment and domain information |
|---|
Score = 126 bits (318), Expect = 1e-33
Identities = 64/244 (26%), Positives = 123/244 (50%), Gaps = 18/244 (7%)
Query: 225 VQIPMCNEK-EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKW-QEAGA 282
+ +P E E+ ++++ ++ LD+P ++++ + +++ D + + V + G
Sbjct: 2 IHVPCYEEPPEMVKETLDSLAALDYPNFEVIV-IDNNTKDEA----LWKPVEAHCAQLGE 56
Query: 283 NIVYRHRILRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEEL 342
+ H G KAG L A+ + D E +A+ DAD+Q PD+L+R VP F D +
Sbjct: 57 RFRFFHVEPLPGAKAGALNYALERTAP-DAEIIAVIDADYQVEPDWLKRLVPIFDD-PRV 114
Query: 343 GLVQARWSFVNKDENLLTRLQDINLSFHFEVEQ----QVNGVFINFFGFNGTAGVWRIKA 398
G VQA + + +E+L R+ F++ + N + +GT + R A
Sbjct: 115 GFVQAPQDYRDGEESLFKRMCYAEYKGFFDIGMVSRNERNAII-----QHGTMCLIRRSA 169
Query: 399 LEDSGGWMERTTVEDMDIAVRAHLRGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPM 458
L+D GGW E ED ++ +R H G+ +++ +P+++EA++KQ+ RW G +
Sbjct: 170 LDDVGGWDEWCITEDSELGLRMHEAGYIGVYVAQSYGHGLIPDTFEAFKKQRFRWAYGAV 229
Query: 459 QLFR 462
Q+ +
Sbjct: 230 QILK 233
|
NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response. Length = 236 |
| >gnl|CDD|234095 TIGR03030, CelA, cellulose synthase catalytic subunit (UDP-forming) | Back alignment and domain information |
|---|
Score = 124 bits (312), Expect = 3e-30
Identities = 94/310 (30%), Positives = 138/310 (44%), Gaps = 39/310 (12%)
Query: 175 IVLFLIQSLDRLILCLGCF---WIRFKRIKPVPKHDDTSDLESGQKGFFPMVLVQIPMCN 231
+L L + IL LG F + P+P D E +P V V IP N
Sbjct: 92 TLLLLAELYSITILLLGYFQTVRPLDRTPVPLPL-----DPEE-----WPTVDVFIPTYN 141
Query: 232 EK-EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQE---------AG 281
E E+ ++ A N+D+P K + +LDD + E + +
Sbjct: 142 EDLEIVATTVLAAKNMDYPADKFRVWILDDGGTDQKRNDPDPEQAEAAQRREELKEFCRK 201
Query: 282 ANIVYRHRILRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEE 341
+ Y R KAGN+ +A+ + D E + IFDAD P DFL+RTV F ++ +
Sbjct: 202 LGVNYITRPRNVHAKAGNINNALKHT---DGELILIFDADHVPTRDFLQRTVGWFVEDPK 258
Query: 342 LGLVQARWSFVNKD---ENLLT--RLQDINLSFHFEVEQQV---NGVFINFFGFNGTAGV 393
L LVQ FV+ D NL T R+ + N F+ ++ N F F G+A V
Sbjct: 259 LFLVQTPHFFVSPDPIERNLGTFRRMPNENELFYGLIQDGNDFWNAAF-----FCGSAAV 313
Query: 394 WRIKALEDSGGWMERTTVEDMDIAVRAHLRGWKFIFLNDVECQCELPESYEAYRKQQHRW 453
R +AL++ GG T ED + A++ H RGW +L+ PE+ + Q+ RW
Sbjct: 314 LRREALDEIGGIAGETVTEDAETALKLHRRGWNSAYLDRPLIAGLAPETLSGHIGQRIRW 373
Query: 454 HSGPMQLFRL 463
G MQ+FRL
Sbjct: 374 AQGMMQIFRL 383
|
Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils. Length = 713 |
| >gnl|CDD|222281 pfam13641, Glyco_tranf_2_3, Glycosyltransferase like family 2 | Back alignment and domain information |
|---|
Score = 107 bits (270), Expect = 7e-27
Identities = 61/237 (25%), Positives = 104/237 (43%), Gaps = 15/237 (6%)
Query: 221 PMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEA 280
P V V +P NE +V +++ ++ D+P+ ++++ V+D SDD T + +E + +
Sbjct: 1 PRVAVVVPTWNEDKVLGRTLRSILAQDYPRLEVIV-VVDGSDDETLD-VARELAAAYPDV 58
Query: 281 GANIVYRHRILRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNE 340
++V R R KA L A+ + + V + DAD +PD LRR +P F +
Sbjct: 59 RVHVVRRPRPPGPTGKARALNEAL-RAI--KSDLVVLLDADSVVDPDTLRRLLPFFLS-K 114
Query: 341 ELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQQVNGVFINFFGFNGTAG---VWRIK 397
+G VQ FV + L F + G AG ++R
Sbjct: 115 GVGAVQG-PVFVLNLRTAVAPLYA----LEFALRHLRFMALRRALGVAPLAGSGSLFRRS 169
Query: 398 ALEDSGGWMERTTV-EDMDIAVRAHLRGWKFIFLNDVECQCELPESYEAYRKQQHRW 453
LE+ GG+ + ED ++ +R GW+ ++ P S A+ KQ+ RW
Sbjct: 170 VLEEIGGFDPGFLLGEDKELGLRLRRAGWRTAYVPGAAVYELSPSSLAAFIKQRTRW 226
|
Members of this family of prokaryotic proteins include putative glucosyltransferase, which are involved in bacterial capsule biosynthesis. Length = 229 |
| >gnl|CDD|133049 cd06427, CESA_like_2, CESA_like_2 is a member of the cellulose synthase superfamily | Back alignment and domain information |
|---|
Score = 104 bits (262), Expect = 1e-25
Identities = 66/254 (25%), Positives = 111/254 (43%), Gaps = 37/254 (14%)
Query: 221 PMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKI-LIQVLDDSDDPTAQTLIKEEVLKWQE 279
P+ + +P+ E EV Q IA++ LD+P+SK+ + +L++ D+ T +
Sbjct: 1 PVYTILVPLYKEAEVLPQLIASLSALDYPRSKLDVKLLLEEDDEETIAAARALRLPSIFR 60
Query: 280 AGANIVYRHRILRDGYKAGNLKSAMNCSYVKDY---EFVAIFDADFQPNPDFLRRTVPHF 336
+V R KA C+Y + E+V I+DA+ P+PD L++ V F
Sbjct: 61 V---VVVPPSQPRTKPKA--------CNYALAFARGEYVVIYDAEDAPDPDQLKKAVAAF 109
Query: 337 -KDNEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQQVNGVFINFFG-------FN 388
+ +++L VQA ++ N EN LTR+ + + F+ +
Sbjct: 110 ARLDDKLACVQAPLNYYNARENWLTRMFALEYAAWFDY-------LLPGLARLGLPIPLG 162
Query: 389 GTAGVWRIKALEDSGGWMERTTVEDMDIAVRAHLRGWKFIFLNDV---ECQCELPESYEA 445
GT+ +R L + GGW ED D+ +R G++ LN E L
Sbjct: 163 GTSNHFRTDVLRELGGWDPFNVTEDADLGLRLARAGYRTGVLNSTTLEEANNALG----N 218
Query: 446 YRKQQHRWHSGPMQ 459
+ +Q+ RW G MQ
Sbjct: 219 WIRQRSRWIKGYMQ 232
|
The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the elongation of beta-1,2 polyglucose chains of glucan. Length = 241 |
| >gnl|CDD|236918 PRK11498, bcsA, cellulose synthase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Score = 90.9 bits (226), Expect = 3e-19
Identities = 85/270 (31%), Positives = 126/270 (46%), Gaps = 30/270 (11%)
Query: 201 KPVPKHDDTSDLESGQKGFFPMVLVQIPMCNEK-EVYQQSIAAVCNLDWPKSKILIQVLD 259
+PVP D S +P V + +P NE V + +I A +DWPK K+ I +LD
Sbjct: 248 QPVPLPKDMS--------LWPTVDIFVPTYNEDLNVVKNTIYASLGIDWPKDKLNIWILD 299
Query: 260 DSDDPTAQTLIKEEVLKW-QEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKDYEFVAIF 318
D +EE ++ QE G Y R + KAGN+ +A+ EFVAIF
Sbjct: 300 DGG--------REEFRQFAQEVGVK--YIARPTHEHAKAGNINNALK---YAKGEFVAIF 346
Query: 319 DADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKD--ENLLTRLQDI---NLSFHFEV 373
D D P FL+ T+ F +++L ++Q F + D E L R + F+ V
Sbjct: 347 DCDHVPTRSFLQMTMGWFLKDKKLAMMQTPHHFFSPDPFERNLGRFRKTPNEGTLFYGLV 406
Query: 374 EQQVNGVFINFFGFNGTAGVWRIKALEDSGGWMERTTVEDMDIAVRAHLRGWKFIFLNDV 433
Q N ++ F F G+ V R K L++ GG T ED ++R H RG+ ++
Sbjct: 407 -QDGNDMWDATF-FCGSCAVIRRKPLDEIGGIAVETVTEDAHTSLRLHRRGYTSAYMRIP 464
Query: 434 ECQCELPESYEAYRKQQHRWHSGPMQLFRL 463
+ ES A+ Q+ RW G +Q+FRL
Sbjct: 465 QAAGLATESLSAHIGQRIRWARGMVQIFRL 494
|
Length = 852 |
| >gnl|CDD|222273 pfam13632, Glyco_trans_2_3, Glycosyl transferase family group 2 | Back alignment and domain information |
|---|
Score = 74.7 bits (184), Expect = 1e-15
Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 10/144 (6%)
Query: 314 FVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHFEV 373
++ + DAD PD LR E + L+Q + N N L RL D F
Sbjct: 1 WILLLDADTVLPPDCLRLIANLMLSPE-VALIQGPVTPRNVR-NWLERLAD----LEFAE 54
Query: 374 EQQVNGVFINFFG----FNGTAGVWRIKALEDSGGWMERTTVEDMDIAVRAHLRGWKFIF 429
+ + +F G G+ ++R AL++ GG+ E + ED D A+R G++ F
Sbjct: 55 DHGKDRLFREALGGVLPSVGSGALFRRSALQEVGGFDESSVSEDFDFALRLRRAGYRVRF 114
Query: 430 LNDVECQCELPESYEAYRKQQHRW 453
+ + + P ++ + +Q+ RW
Sbjct: 115 VPESGVYEKSPPTFRDFLRQRLRW 138
|
Members of this family of prokaryotic proteins include putative glucosyltransferases, which are involved in bacterial capsule biosynthesis. Length = 194 |
| >gnl|CDD|215980 pfam00535, Glycos_transf_2, Glycosyl transferase family 2 | Back alignment and domain information |
|---|
Score = 72.9 bits (179), Expect = 4e-15
Identities = 34/177 (19%), Positives = 66/177 (37%), Gaps = 12/177 (6%)
Query: 227 IPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVY 286
IP NE++ ++++ ++ N + +I++ V D S D T E ++ + +
Sbjct: 4 IPTYNEEKYLEETLESLLNQTYKNFEIIV-VDDGSTDGT-----VEIAEEYAKNDPRVRV 57
Query: 287 RHRILRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQ 346
G KA + + + +++A DAD + PD+L + V + N +V
Sbjct: 58 IRLEENLG-KAAARNAGLKLA---TGDYIAFLDADDEVAPDWLEKLVELLEKN-GADIVI 112
Query: 347 ARWSFVNKDENLLTRLQDINLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEDSG 403
+N + L R L + F A R + LE+
Sbjct: 113 GSRVVINGETRLYGRALRFELLLLLGKLGARSLGLKVLFLIGSNALY-RREVLEELL 168
|
Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids. Length = 168 |
| >gnl|CDD|236882 PRK11204, PRK11204, N-glycosyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 67.7 bits (166), Expect = 3e-12
Identities = 65/274 (23%), Positives = 110/274 (40%), Gaps = 25/274 (9%)
Query: 192 CFWIRFKRIKPVPKHDDTSDLESGQKGFFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKS 251
F+ +R + + L+ +P V + +P NE E +++I+ + L +P
Sbjct: 31 YFYFLRER-HWPLGENPPAQLKE-----YPGVSILVPCYNEGENVEETISHLLALRYPNY 84
Query: 252 KILIQVLDDSDDPTAQTLIKEEVL-KWQEAGANIVYRHRILRDGYKAGNLKSAM---NCS 307
++ I + D S D T E+L + + LR + A N A +
Sbjct: 85 EV-IAINDGSSDNTG------EILDRLAA-------QIPRLRVIHLAENQGKANALNTGA 130
Query: 308 YVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINL 367
E++ D D +PD V HF N +G V N+ LL R+Q
Sbjct: 131 AAARSEYLVCIDGDALLDPDAAAYMVEHFLHNPRVGAVTGNPRIRNR-STLLGRIQVGEF 189
Query: 368 SFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEDSGGWMERTTVEDMDIAVRAHLRGWKF 427
S + ++ V+ F +G +R AL + G W ED+DI+ + LRGW
Sbjct: 190 SSIIGLIKRAQRVYGRVFTVSGVITAFRKSALHEVGYWSTDMITEDIDISWKLQLRGWDI 249
Query: 428 IFLNDVECQCELPESYEAYRKQQHRWHSGPMQLF 461
+ C +PE+ + KQ+ RW G ++
Sbjct: 250 RYEPRALCWILMPETLKGLWKQRLRWAQGGAEVL 283
|
Length = 420 |
| >gnl|CDD|188452 TIGR03937, PgaC_IcaA, poly-beta-1,6 N-acetyl-D-glucosamine synthase | Back alignment and domain information |
|---|
Score = 64.2 bits (157), Expect = 5e-11
Identities = 65/265 (24%), Positives = 108/265 (40%), Gaps = 17/265 (6%)
Query: 192 CFWIRFKRIKPVPKHDDTSDLESGQKGFFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKS 251
++ ++R P+P L+ +P V + +P NE +++I+ + L +P
Sbjct: 22 YYYFHWERKWPLP-RTPPPPLDE-----YPGVSILVPCYNEGANVEETISHLLALRYPNF 75
Query: 252 KILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKD 311
+I I + D S D TA E + + + H G KA L + +
Sbjct: 76 EI-IAINDGSKDNTA-----EILDRLAAQDPRLRVIHLAENQG-KANALNTGLL---AAK 125
Query: 312 YEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHF 371
YE++ D D +PD V HF N +G V N+ +L ++Q S
Sbjct: 126 YEYLVCIDGDALLDPDAAYWMVEHFLSNPRVGAVTGNPRIRNR-STILGKIQVGEFSSII 184
Query: 372 EVEQQVNGVFINFFGFNGTAGVWRIKALEDSGGWMERTTVEDMDIAVRAHLRGWKFIFLN 431
+ ++ V+ F +G +R AL D G W ED+DI+ + L GW +
Sbjct: 185 GLIKRAQRVYGTIFTVSGVITAFRKSALHDVGYWSTDMITEDIDISWKLQLAGWNIRYEP 244
Query: 432 DVECQCELPESYEAYRKQQHRWHSG 456
C +PE+ KQ+ RW G
Sbjct: 245 RALCWILMPETLRGLWKQRLRWAQG 269
|
Members of this protein family are biofilm-forming enzymes that polymerize N-acetyl-D-glucosamine residues in beta(1,6) linkage. One named members is IcaA (intercellular adhesin protein A), an enzyme that acts (with aid of subunit IcaD) in Polysaccharide Intercellular Adhesin (PIA) biosynthesis in Staphylococcus epidermis). The homologous member in E. coli is designated PgaC. Members are often encoded next to a polysaccharide deacetylase and involved in biofilm formation. Note that chitin, although also made from N-acetylglucosamine, is formed with beta-1,4 linkages. Length = 407 |
| >gnl|CDD|222183 pfam13506, Glyco_transf_21, Glycosyl transferase family 21 | Back alignment and domain information |
|---|
Score = 58.8 bits (143), Expect = 3e-10
Identities = 36/162 (22%), Positives = 64/162 (39%), Gaps = 10/162 (6%)
Query: 294 GYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVN 353
K NL A++ + + Y+ + I D+D + PD+LR + D ++GLV +
Sbjct: 16 NPKVNNLLQALD-AKAR-YDLLVISDSDVRVPPDYLRELLAPLAD-PKVGLVTGPP-YGA 71
Query: 354 KDENLLTRLQDINLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEDSGGW--MERTTV 411
L+ L+ V Q + G+ G + R +ALE GG+ +
Sbjct: 72 DRRGFAAALEAAFLNTLAGVLQALAGLGF----AVGMSMALRREALERIGGFEALADYLA 127
Query: 412 EDMDIAVRAHLRGWKFIFLNDVECQCELPESYEAYRKQQHRW 453
ED + G + + Q ++ A+ +Q RW
Sbjct: 128 EDYALGKALRAAGLRVVLSPRPVEQPSGRRTFRAFMARQLRW 169
|
This is a family of ceramide beta-glucosyltransferases - EC:2.4.1.80. Length = 171 |
| >gnl|CDD|133061 cd06439, CESA_like_1, CESA_like_1 is a member of the cellulose synthase (CESA) superfamily | Back alignment and domain information |
|---|
Score = 58.4 bits (142), Expect = 1e-09
Identities = 61/276 (22%), Positives = 100/276 (36%), Gaps = 49/276 (17%)
Query: 186 LILCLGCFWIRFKRIKPVPKHDDTSDLESGQKGFFPMVLVQIPMCNEKEVYQQSIAAVCN 245
L+ L R + P + P V + IP NE+ V + + +
Sbjct: 8 LLKLLA----RLRPKPPSLPDPA----------YLPTVTIIIPAYNEEAVIEAKLENLLA 53
Query: 246 LDWPKSK--ILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSA 303
LD+P+ + I++ V D S D TA E +E V R KA L A
Sbjct: 54 LDYPRDRLEIIV-VSDGSTDGTA-----EIA---REYADKGVKLLRFPERRGKAAALNRA 104
Query: 304 MNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKD-----ENL 358
+ + E V DA+ +PD LR V HF D +G V V+ E L
Sbjct: 105 L--ALATG-EIVVFTDANALLDPDALRLLVRHFAD-PSVGAVSGELVIVDGGGSGSGEGL 160
Query: 359 LTRLQDINLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKAL--EDSGGWMERTTVEDMDI 416
+ + ++ E ++ G NG I A+ E T +D +
Sbjct: 161 YWKYE----NWLKRAESRLGST----VGANGA-----IYAIRRELFRPLPADTINDDFVL 207
Query: 417 AVRAHLRGWKFIFLNDVECQCELPESYEAYRKQQHR 452
+R +G++ ++ D E+ E +++ R
Sbjct: 208 PLRIARQGYRVVYEPDAVAYEEVAEDGSEEFRRRVR 243
|
This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Length = 251 |
| >gnl|CDD|184755 PRK14583, hmsR, N-glycosyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 59.6 bits (144), Expect = 2e-09
Identities = 63/269 (23%), Positives = 105/269 (39%), Gaps = 16/269 (5%)
Query: 193 FWIRFKRIKPVPKHDDTSDLESGQKGFFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSK 252
FW +R + P DD KG P+V + +P NE +++I A + +
Sbjct: 52 FW--LRRERHWPWGDDVP--APELKGH-PLVSILVPCFNEGLNARETIHAALAQTYTNIE 106
Query: 253 ILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKDY 312
+ I + D S D TAQ L +A R R++ + G + +
Sbjct: 107 V-IAINDGSSDDTAQVL---------DALLAEDPRLRVIHLAHNQGKAIALRMGAAAARS 156
Query: 313 EFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHFE 372
E++ D D + + + V N G V + L+ R+Q S
Sbjct: 157 EYLVCIDGDALLDKNAVPYLVAPLIANPRTGAVTGN-PRIRTRSTLIGRVQVGEFSSIIG 215
Query: 373 VEQQVNGVFINFFGFNGTAGVWRIKALEDSGGWMERTTVEDMDIAVRAHLRGWKFIFLND 432
+ ++ V+ F +G +R +AL D G W ED+DI+ + L+ W F
Sbjct: 216 LIKRTQRVYGQVFTVSGVVAAFRRRALADVGYWSPDMITEDIDISWKLQLKHWSVFFEPR 275
Query: 433 VECQCELPESYEAYRKQQHRWHSGPMQLF 461
C +PE+ KQ+ RW G ++F
Sbjct: 276 GLCWILMPETLRGLWKQRLRWAQGGAEVF 304
|
Length = 444 |
| >gnl|CDD|132997 cd00761, Glyco_tranf_GTA_type, Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold | Back alignment and domain information |
|---|
Score = 56.0 bits (135), Expect = 2e-09
Identities = 26/126 (20%), Positives = 49/126 (38%), Gaps = 10/126 (7%)
Query: 227 IPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVY 286
IP NE+ ++ + ++ +P ++++ V D S D T E+L+ V
Sbjct: 3 IPAYNEEPYLERCLESLLAQTYPNFEVIV-VDDGSTDGTL------EILEEYAKKDPRVI 55
Query: 287 RHRILRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQ 346
R + A + + + E++ DAD PD+L R V + E V
Sbjct: 56 RVINEENQGLAAARNAGLKAA---RGEYILFLDADDLLLPDWLERLVAELLADPEADAVG 112
Query: 347 ARWSFV 352
+ +
Sbjct: 113 GPGNLL 118
|
Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it also includes families GT-43, GT-6, GT-8, GT13 and GT-7; which are evolutionarily related to GT-2 and share structure similarities. Length = 156 |
| >gnl|CDD|133034 cd04191, Glucan_BSP_ModH, Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan | Back alignment and domain information |
|---|
Score = 48.0 bits (115), Expect = 4e-06
Identities = 39/150 (26%), Positives = 59/150 (39%), Gaps = 23/150 (15%)
Query: 228 PMCNEK--------EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEE-----V 274
P+ NE +S+A D +L D+ DP + EE +
Sbjct: 6 PVYNEDPARVFAGLRAMYESLAKTGLAD----HFDFFILSDTRDPDI--WLAEEAAWLDL 59
Query: 275 LKWQEAGANIVYRHRILRDGYKAGNLKSAMNC-SYVKDYEFVAIFDADFQPNPDFLRRTV 333
+ A I YR R G KAGN+ A C + Y+++ + DAD + D + R V
Sbjct: 60 CEELGAQGRIYYRRRRENTGRKAGNI--ADFCRRWGSRYDYMVVLDADSLMSGDTIVRLV 117
Query: 334 PHFKDNEELGLVQARWSFVNKDENLLTRLQ 363
+ N G++Q + E L RLQ
Sbjct: 118 RRMEANPRAGIIQTAPKLIGA-ETLFARLQ 146
|
Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane. Length = 254 |
| >gnl|CDD|133058 cd06436, GlcNAc-1-P_transferase, N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine | Back alignment and domain information |
|---|
Score = 45.8 bits (109), Expect = 1e-05
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 23/153 (15%)
Query: 225 VQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDD-SDDPTAQTLIKEEVLKWQEAGAN 283
V +P NE+ V Q+++A++ L+ V+DD SDD TA +++ + ++ +
Sbjct: 1 VLVPCLNEEAVIQRTLASLLRNK---PNFLVLVIDDASDDDTAG-IVRLAI---TDSRVH 53
Query: 284 IVYRHR---------ILRDGYKAGNLKSAMNCSYVKDYE--FVAIFDADFQPNPDFLRRT 332
++ RH L Y ++ + D E +A+ DAD + +P+ L
Sbjct: 54 LLRRHLPNARTGKGDALNAAYDQ--IRQILIEEGA-DPERVIIAVIDADGRLDPNALEAV 110
Query: 333 VPHFKDNEELGLVQARWSFVNKDENLLTRLQDI 365
P+F + + Q+R N+ +NLLT LQD+
Sbjct: 111 APYF-SDPRVAGTQSRVRMYNRHKNLLTILQDL 142
|
N-acetyl-glucosamine transferase is responsible for the synthesis of bacteria Poly-beta-1,6-N-acetyl-D-glucosamine (PGA). Poly-beta-1,6-N-acetyl-D-glucosamine is a homopolymer that serves as an adhesion for the maintenance of biofilm structural stability in diverse eubacteria. N-acetyl-glucosamine transferase is the product of gene pgaC. Genetic analysis indicated that all four genes of the pgaABCD locus were required for the PGA production, pgaC being a glycosyltransferase. Length = 191 |
| >gnl|CDD|133060 cd06438, EpsO_like, EpsO protein participates in the methanolan synthesis | Back alignment and domain information |
|---|
Score = 44.9 bits (107), Expect = 2e-05
Identities = 42/154 (27%), Positives = 68/154 (44%), Gaps = 18/154 (11%)
Query: 227 IPMCNEKEVYQQSIAAVCNLDWPKSKI-LIQVLDDSDDPTAQTLIKEEVLKWQEAGANIV 285
IP NE+ V ++ ++ D+P+ + V D+ D TAQ + AGA ++
Sbjct: 3 IPAHNEEAVIGNTVRSLKAQDYPRELYRIFVVADNCTDDTAQVA--------RAAGATVL 54
Query: 286 YRHRILRDGYKAGNLKSAMN--CSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELG 343
RH R G K L + D + V +FDAD +P+ L F
Sbjct: 55 ERHDPERRG-KGYALDFGFRHLLNLADDPDAVVVFDADNLVDPNALEELNARFAAGAR-- 111
Query: 344 LVQARWSFVNKDENLLTRLQDINLSFHFEVEQQV 377
+VQA ++ N D++ +TRL +F F V ++
Sbjct: 112 VVQAYYNSKNPDDSWITRL----YAFAFLVFNRL 141
|
The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier. Length = 183 |
| >gnl|CDD|234419 TIGR03965, mycofact_glyco, mycofactocin system glycosyltransferase | Back alignment and domain information |
|---|
Score = 40.9 bits (96), Expect = 0.001
Identities = 59/213 (27%), Positives = 92/213 (43%), Gaps = 24/213 (11%)
Query: 221 PMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDD-SDDPTAQTLIKEEVLKWQE 279
P V V +P+ N + +AA+ LD+P+ ++ + V+DD S+DP
Sbjct: 74 PSVTVVVPVRNRPAGLARLLAALLALDYPRDRLEVIVVDDGSEDPVPTR---------AA 124
Query: 280 AGANI---VYRHRILRDGYKAGN--LKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVP 334
GA + V RH + A N ++A EFVA D+D P P +LR +
Sbjct: 125 RGARLPVRVIRHPRRQGPAAARNAGARAART-------EFVAFTDSDVVPRPGWLRALLA 177
Query: 335 HFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQQVNGVFINFFGFNGTAGVW 394
HF D + LV R + ++ L R + + S E+ V A +
Sbjct: 178 HFDD-PGVALVAPRVVALPAEDTRLARYEAVRSSLDLGPEEAVVRPRGPVSYVPSAALLV 236
Query: 395 RIKALEDSGGWMERTTV-EDMDIAVRAHLRGWK 426
R +AL + GG+ ER V ED+D+ R G +
Sbjct: 237 RRRALLEVGGFDERLEVGEDVDLCWRLCEAGGR 269
|
Members of this protein family are putative glycosyltransferases, members of pfam00535 (glycosyl transferase family 2). Members appear mostly in the Actinobacteria, where they appear to be part of a system for converting a precursor peptide (TIGR03969) into a novel redox carrier designated mycofactocin. A radical SAM enzyme, TIGR03962, is a proposed to be a key maturase for mycofactocin. Length = 467 |
| >gnl|CDD|133056 cd06434, GT2_HAS, Hyaluronan synthases catalyze polymerization of hyaluronan | Back alignment and domain information |
|---|
Score = 39.2 bits (92), Expect = 0.002
Identities = 28/138 (20%), Positives = 52/138 (37%), Gaps = 11/138 (7%)
Query: 326 PDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQQVNGVFINFF 385
P+ L + F+D ++G V + ++ + L L E +
Sbjct: 92 PNALPEMLKPFED-PKVGGVGTNQRILRPRDSKWSFLAAEYLERRNEEIRAAMSYDGGVP 150
Query: 386 GFNGTAGVWRIKALED--------SGGWMERTTV--EDMDIAVRAHLRGWKFIFLNDVEC 435
+G +R + L+D + +M R +D + G+K ++ E
Sbjct: 151 CLSGRTAAYRTEILKDFLFLEEFTNETFMGRRLNAGDDRFLTRYVLSHGYKTVYQYTSEA 210
Query: 436 QCELPESYEAYRKQQHRW 453
E PE+Y+ + KQQ RW
Sbjct: 211 YTETPENYKKFLKQQLRW 228
|
Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate. Length = 235 |
| >gnl|CDD|133012 cd02520, Glucosylceramide_synthase, Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis | Back alignment and domain information |
|---|
Score = 38.7 bits (91), Expect = 0.003
Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 6/125 (4%)
Query: 221 PMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEA 280
P V + P+C +++ + D+PK +IL V D DDP A ++++ + K+
Sbjct: 1 PGVSILKPLCGVDPNLYENLESFFQQDYPKYEILFCV-QDEDDP-AIPVVRKLIAKYPNV 58
Query: 281 GANIVYRHRILRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNE 340
A ++ + K NL + Y+ + I D+D PD+LRR V +
Sbjct: 59 DARLLIGGEKVGINPKVNNL---IKGYEEARYDILVISDSDISVPPDYLRRMVAPL-MDP 114
Query: 341 ELGLV 345
+GLV
Sbjct: 115 GVGLV 119
|
UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment. Length = 196 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 482 | |||
| PRK11498 | 852 | bcsA cellulose synthase catalytic subunit; Provisi | 100.0 | |
| TIGR03030 | 713 | CelA cellulose synthase catalytic subunit (UDP-for | 100.0 | |
| PRK14583 | 444 | hmsR N-glycosyltransferase; Provisional | 100.0 | |
| PRK11204 | 420 | N-glycosyltransferase; Provisional | 100.0 | |
| cd06437 | 232 | CESA_CaSu_A2 Cellulose synthase catalytic subunit | 100.0 | |
| TIGR03111 | 439 | glyc2_xrt_Gpos1 putative glycosyltransferase TIGR0 | 100.0 | |
| PRK05454 | 691 | glucosyltransferase MdoH; Provisional | 100.0 | |
| cd06427 | 241 | CESA_like_2 CESA_like_2 is a member of the cellulo | 100.0 | |
| cd04191 | 254 | Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elon | 100.0 | |
| COG1215 | 439 | Glycosyltransferases, probably involved in cell wa | 100.0 | |
| TIGR03472 | 373 | HpnI hopanoid biosynthesis associated glycosyl tra | 100.0 | |
| cd06421 | 234 | CESA_CelA_like CESA_CelA_like are involved in the | 100.0 | |
| cd06435 | 236 | CESA_NdvC_like NdvC_like proteins in this family a | 100.0 | |
| PRK14716 | 504 | bacteriophage N4 adsorption protein B; Provisional | 100.0 | |
| PF13641 | 228 | Glyco_tranf_2_3: Glycosyltransferase like family 2 | 100.0 | |
| cd02520 | 196 | Glucosylceramide_synthase Glucosylceramide synthas | 100.0 | |
| cd04190 | 244 | Chitin_synth_C C-terminal domain of Chitin Synthas | 100.0 | |
| PRK11234 | 727 | nfrB bacteriophage N4 adsorption protein B; Provis | 99.97 | |
| cd04192 | 229 | GT_2_like_e Subfamily of Glycosyltransferase Famil | 99.97 | |
| cd06434 | 235 | GT2_HAS Hyaluronan synthases catalyze polymerizati | 99.97 | |
| cd06439 | 251 | CESA_like_1 CESA_like_1 is a member of the cellulo | 99.96 | |
| PRK15489 | 703 | nfrB bacteriophage N4 adsorption protein B; Provis | 99.96 | |
| PLN02893 | 734 | Cellulose synthase-like protein | 99.96 | |
| TIGR03469 | 384 | HonB hopene-associated glycosyltransferase HpnB. T | 99.95 | |
| cd02525 | 249 | Succinoglycan_BP_ExoA ExoA is involved in the bios | 99.95 | |
| cd02510 | 299 | pp-GalNAc-T pp-GalNAc-T initiates the formation of | 99.94 | |
| cd06438 | 183 | EpsO_like EpsO protein participates in the methano | 99.93 | |
| PLN02189 | 1040 | cellulose synthase | 99.92 | |
| PLN02195 | 977 | cellulose synthase A | 99.92 | |
| cd04184 | 202 | GT2_RfbC_Mx_like Myxococcus xanthus RfbC like prot | 99.92 | |
| cd04195 | 201 | GT2_AmsE_like GT2_AmsE_like is involved in exopoly | 99.92 | |
| COG2943 | 736 | MdoH Membrane glycosyltransferase [Cell envelope b | 99.91 | |
| PLN02638 | 1079 | cellulose synthase A (UDP-forming), catalytic subu | 99.91 | |
| cd06436 | 191 | GlcNAc-1-P_transferase N-acetyl-glucosamine transf | 99.91 | |
| PF03142 | 527 | Chitin_synth_2: Chitin synthase; InterPro: IPR0048 | 99.91 | |
| PLN02248 | 1135 | cellulose synthase-like protein | 99.9 | |
| PLN02190 | 756 | cellulose synthase-like protein | 99.9 | |
| cd06913 | 219 | beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltran | 99.9 | |
| PLN02400 | 1085 | cellulose synthase | 99.89 | |
| PLN02436 | 1094 | cellulose synthase A | 99.89 | |
| cd06433 | 202 | GT_2_WfgS_like WfgS and WfeV are involved in O-ant | 99.89 | |
| PLN02726 | 243 | dolichyl-phosphate beta-D-mannosyltransferase | 99.89 | |
| cd04196 | 214 | GT_2_like_d Subfamily of Glycosyltransferase Famil | 99.89 | |
| cd04185 | 202 | GT_2_like_b Subfamily of Glycosyltransferase Famil | 99.88 | |
| PLN02915 | 1044 | cellulose synthase A [UDP-forming], catalytic subu | 99.88 | |
| cd02526 | 237 | GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr | 99.88 | |
| cd06420 | 182 | GT2_Chondriotin_Pol_N N-terminal domain of Chondro | 99.87 | |
| cd04186 | 166 | GT_2_like_c Subfamily of Glycosyltransferase Famil | 99.87 | |
| PRK10018 | 279 | putative glycosyl transferase; Provisional | 99.87 | |
| cd02522 | 221 | GT_2_like_a GT_2_like_a represents a glycosyltrans | 99.87 | |
| cd06423 | 180 | CESA_like CESA_like is the cellulose synthase supe | 99.87 | |
| cd06442 | 224 | DPM1_like DPM1_like represents putative enzymes si | 99.86 | |
| PRK10073 | 328 | putative glycosyl transferase; Provisional | 99.86 | |
| PF13632 | 193 | Glyco_trans_2_3: Glycosyl transferase family group | 99.86 | |
| PRK10063 | 248 | putative glycosyl transferase; Provisional | 99.84 | |
| cd04188 | 211 | DPG_synthase DPG_synthase is involved in protein N | 99.83 | |
| COG1216 | 305 | Predicted glycosyltransferases [General function p | 99.83 | |
| PTZ00260 | 333 | dolichyl-phosphate beta-glucosyltransferase; Provi | 99.81 | |
| PF13506 | 175 | Glyco_transf_21: Glycosyl transferase family 21 | 99.8 | |
| KOG2547 | 431 | consensus Ceramide glucosyltransferase [Lipid tran | 99.77 | |
| cd04179 | 185 | DPM_DPG-synthase_like DPM_DPG-synthase_like is a m | 99.77 | |
| PF10111 | 281 | Glyco_tranf_2_2: Glycosyltransferase like family 2 | 99.77 | |
| PF00535 | 169 | Glycos_transf_2: Glycosyl transferase family 2; In | 99.77 | |
| TIGR01556 | 281 | rhamnosyltran L-rhamnosyltransferase. Rhamnolipids | 99.77 | |
| PF03552 | 720 | Cellulose_synt: Cellulose synthase; InterPro: IPR0 | 99.75 | |
| PRK13915 | 306 | putative glucosyl-3-phosphoglycerate synthase; Pro | 99.74 | |
| cd04187 | 181 | DPM1_like_bac Bacterial DPM1_like enzymes are rela | 99.74 | |
| PRK10714 | 325 | undecaprenyl phosphate 4-deoxy-4-formamido-L-arabi | 99.7 | |
| cd00761 | 156 | Glyco_tranf_GTA_type Glycosyltransferase family A | 99.64 | |
| KOG2978 | 238 | consensus Dolichol-phosphate mannosyltransferase [ | 99.62 | |
| KOG2571 | 862 | consensus Chitin synthase/hyaluronan synthase (gly | 99.58 | |
| cd02511 | 229 | Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 | 99.49 | |
| COG0463 | 291 | WcaA Glycosyltransferases involved in cell wall bi | 99.41 | |
| KOG3738 | 559 | consensus Predicted polypeptide N-acetylgalactosam | 99.15 | |
| cd02514 | 334 | GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an es | 99.14 | |
| KOG2977 | 323 | consensus Glycosyltransferase [General function pr | 99.11 | |
| KOG3736 | 578 | consensus Polypeptide N-acetylgalactosaminyltransf | 99.1 | |
| KOG3737 | 603 | consensus Predicted polypeptide N-acetylgalactosam | 99.06 | |
| PF13712 | 217 | Glyco_tranf_2_5: Glycosyltransferase like family; | 98.83 | |
| cd00899 | 219 | b4GalT Beta-4-Galactosyltransferase is involved in | 98.12 | |
| PF03071 | 434 | GNT-I: GNT-I family; InterPro: IPR004139 The biosy | 97.99 | |
| COG4092 | 346 | Predicted glycosyltransferase involved in capsule | 97.71 | |
| PF13704 | 97 | Glyco_tranf_2_4: Glycosyl transferase family 2 | 97.5 | |
| PF03452 | 269 | Anp1: Anp1; InterPro: IPR005109 The members of thi | 97.4 | |
| PF09488 | 381 | Osmo_MPGsynth: Mannosyl-3-phosphoglycerate synthas | 97.24 | |
| TIGR02460 | 381 | osmo_MPGsynth mannosyl-3-phosphoglycerate synthase | 97.1 | |
| PRK14503 | 393 | mannosyl-3-phosphoglycerate synthase; Provisional | 97.09 | |
| KOG3588 | 494 | consensus Chondroitin synthase 1 [Carbohydrate tra | 96.77 | |
| PF05679 | 499 | CHGN: Chondroitin N-acetylgalactosaminyltransferas | 96.68 | |
| PF11316 | 234 | Rhamno_transf: Putative rhamnosyl transferase ; In | 96.61 | |
| PF02709 | 78 | Glyco_transf_7C: N-terminal domain of galactosyltr | 96.53 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 96.33 | |
| PF11735 | 241 | CAP59_mtransfer: Cryptococcal mannosyltransferase | 96.17 | |
| PF11397 | 343 | GlcNAc: Glycosyltransferase (GlcNAc); InterPro: IP | 95.14 | |
| TIGR03584 | 222 | PseF pseudaminic acid CMP-transferase. The sequenc | 94.66 | |
| KOG1413 | 411 | consensus N-acetylglucosaminyltransferase I [Carbo | 94.55 | |
| KOG3916 | 372 | consensus UDP-Gal:glucosylceramide beta-1,4-galact | 94.53 | |
| PLN02917 | 293 | CMP-KDO synthetase | 94.45 | |
| PF01644 | 163 | Chitin_synth_1: Chitin synthase; InterPro: IPR0048 | 94.36 | |
| PF01762 | 195 | Galactosyl_T: Galactosyltransferase; InterPro: IPR | 94.32 | |
| cd00218 | 223 | GlcAT-I Beta1,3-glucuronyltransferase I (GlcAT-I) | 94.31 | |
| PF09258 | 247 | Glyco_transf_64: Glycosyl transferase family 64 do | 94.13 | |
| PF02434 | 252 | Fringe: Fringe-like; InterPro: IPR003378 The Notch | 93.88 | |
| TIGR00466 | 238 | kdsB 3-deoxy-D-manno-octulosonate cytidylyltransfe | 93.81 | |
| COG1212 | 247 | KdsB CMP-2-keto-3-deoxyoctulosonic acid synthetase | 93.33 | |
| KOG1476 | 330 | consensus Beta-1,3-glucuronyltransferase B3GAT1/SQ | 93.25 | |
| PLN02458 | 346 | transferase, transferring glycosyl groups | 92.33 | |
| PF02364 | 817 | Glucan_synthase: 1,3-beta-glucan synthase componen | 92.1 | |
| PF06306 | 347 | CgtA: Beta-1,4-N-acetylgalactosaminyltransferase ( | 91.52 | |
| TIGR03202 | 190 | pucB xanthine dehydrogenase accessory protein pucB | 90.88 | |
| cd04182 | 186 | GT_2_like_f GT_2_like_f is a subfamily of the glyc | 90.23 | |
| PF12804 | 160 | NTP_transf_3: MobA-like NTP transferase domain; PD | 89.62 | |
| cd02540 | 229 | GT2_GlmU_N_bac N-terminal domain of bacterial GlmU | 89.08 | |
| PF04666 | 297 | Glyco_transf_54: N-Acetylglucosaminyltransferase-I | 88.78 | |
| TIGR03310 | 188 | matur_ygfJ molybdenum hydroxylase accessory protei | 88.44 | |
| PF03214 | 348 | RGP: Reversibly glycosylated polypeptide; InterPro | 88.09 | |
| PF05045 | 498 | RgpF: Rhamnan synthesis protein F; InterPro: IPR00 | 87.67 | |
| PRK13385 | 230 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltrans | 85.55 | |
| cd06422 | 221 | NTP_transferase_like_1 NTP_transferase_like_1 is a | 85.44 | |
| PRK13368 | 238 | 3-deoxy-manno-octulosonate cytidylyltransferase; P | 85.17 | |
| PLN03133 | 636 | beta-1,3-galactosyltransferase; Provisional | 85.16 | |
| cd04181 | 217 | NTP_transferase NTP_transferases catalyze the tran | 84.44 | |
| PRK14353 | 446 | glmU bifunctional N-acetylglucosamine-1-phosphate | 84.16 | |
| KOG4179 | 568 | consensus Lysyl hydrolase/glycosyltransferase fami | 83.83 | |
| cd02517 | 239 | CMP-KDO-Synthetase CMP-KDO synthetase catalyzes th | 83.59 | |
| PRK05450 | 245 | 3-deoxy-manno-octulosonate cytidylyltransferase; P | 83.24 | |
| PLN03153 | 537 | hypothetical protein; Provisional | 82.92 | |
| cd06425 | 233 | M1P_guanylylT_B_like_N N-terminal domain of the M1 | 82.86 | |
| PRK00317 | 193 | mobA molybdopterin-guanine dinucleotide biosynthes | 82.7 | |
| cd06915 | 223 | NTP_transferase_WcbM_like WcbM_like is a subfamily | 82.4 | |
| KOG1022 | 691 | consensus Acetylglucosaminyltransferase EXT2/exost | 82.22 | |
| TIGR01173 | 451 | glmU UDP-N-acetylglucosamine diphosphorylase/gluco | 82.13 | |
| cd06428 | 257 | M1P_guanylylT_A_like_N N-terminal domain of M1P_gu | 81.28 | |
| TIGR03552 | 195 | F420_cofC 2-phospho-L-lactate guanylyltransferase | 80.88 | |
| cd02503 | 181 | MobA MobA catalyzes the formation of molybdopterin | 80.78 | |
| cd02513 | 223 | CMP-NeuAc_Synthase CMP-NeuAc_Synthase activates N- | 80.74 | |
| KOG2287 | 349 | consensus Galactosyltransferases [Carbohydrate tra | 80.67 | |
| PRK14352 | 482 | glmU bifunctional N-acetylglucosamine-1-phosphate | 80.61 | |
| cd06431 | 280 | GT8_LARGE_C LARGE catalytic domain has closest hom | 80.04 |
| >PRK11498 bcsA cellulose synthase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-42 Score=377.36 Aligned_cols=315 Identities=26% Similarity=0.401 Sum_probs=239.0
Q ss_pred hhhHhHHHHHHHHHHHHhhHhhccchHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccCCCCC
Q 011596 141 PLAIKGAFDLLYSSWVLVRVHYLAPPLQFLAN-ACIVLFLIQSLDRLILCLGCFWIRFKRIKPVPKHDDTSDLESGQKGF 219 (482)
Q Consensus 141 ~~~~~~~~~~~y~~w~~~r~~~~~~~l~~~~~-~~~~lf~i~~~~~l~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~ 219 (482)
+.++..+...+|++| |...+++.-..+.. +.+++++...+..+...++++.......++. ... +...+.
T Consensus 189 l~~l~~~~~~rY~~W---R~~~tL~~~~~~~~~~~~~ll~ae~~~~~~~~lg~~~~~~~~~r~~-~~~------~~~~~~ 258 (852)
T PRK11498 189 LIVLSLTVSCRYIWW---RYTSTLNWDDPVSLVCGLILLFAETYAWIVLVLGYFQVVWPLNRQP-VPL------PKDMSL 258 (852)
T ss_pred HHHHHHHHHHHHHHH---HHheeeCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCC-CCC------CcccCC
Confidence 445666778999999 66777765433322 3344555666666666666665443222211 110 111225
Q ss_pred CCeEEEEeecCCch-HHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccc
Q 011596 220 FPMVLVQIPMCNEK-EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAG 298 (482)
Q Consensus 220 ~P~VsViIP~yne~-~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~ 298 (482)
.|+|+|+||+|||+ +.+++++.++++||||+++++|+|+||+++|++.++++ +.++ .|..++++.|+|++
T Consensus 259 ~P~VsViIPtYNE~~~vv~~tI~a~l~~dYP~~k~EViVVDDgS~D~t~~la~-------~~~v--~yI~R~~n~~gKAG 329 (852)
T PRK11498 259 WPTVDIFVPTYNEDLNVVKNTIYASLGIDWPKDKLNIWILDDGGREEFRQFAQ-------EVGV--KYIARPTHEHAKAG 329 (852)
T ss_pred CCcEEEEEecCCCcHHHHHHHHHHHHhccCCCCceEEEEEeCCCChHHHHHHH-------HCCc--EEEEeCCCCcchHH
Confidence 79999999999998 67889999999999999899999999999999988776 3344 45566777888999
Q ss_pred cHHHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCC--hHHHHHhh--hhhhhhhhh
Q 011596 299 NLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDEN--LLTRLQDI--NLSFHFEVE 374 (482)
Q Consensus 299 aln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~--~~~~~~~~--~~~~~~~~~ 374 (482)
|+|.|++ .+++|||+++|||++++||+|++++..|.+||++++||+++.+.|.+.- ........ +....+...
T Consensus 330 nLN~aL~---~a~GEyIavlDAD~ip~pdfL~~~V~~f~~dP~VglVQtp~~f~n~dp~~rnl~~~~~~~~e~~~fy~~i 406 (852)
T PRK11498 330 NINNALK---YAKGEFVAIFDCDHVPTRSFLQMTMGWFLKDKKLAMMQTPHHFFSPDPFERNLGRFRKTPNEGTLFYGLV 406 (852)
T ss_pred HHHHHHH---hCCCCEEEEECCCCCCChHHHHHHHHHHHhCCCeEEEEcceeccCCchHHHhhHHHhhcccchhHHHHHH
Confidence 9999999 5899999999999999999999999998879999999999888775421 01111110 111112222
Q ss_pred hhhccccccccccccceEeeeHHHHHHcCCCCCCCchhHHHHHHHHHHCCCcEEEeccceecccCCcCHHHHHHHHHhhh
Q 011596 375 QQVNGVFINFFGFNGTAGVWRIKALEDSGGWMERTTVEDMDIAVRAHLRGWKFIFLNDVECQCELPESYEAYRKQQHRWH 454 (482)
Q Consensus 375 ~~~~~~~~~~~~~~G~~~~~Rr~~l~~iGgf~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~~~~~qr~RW~ 454 (482)
+...... +...++|+++++||++++++|||+++.++||++++.+++++||++.|++++.+.++.|+|+.++.+||.||+
T Consensus 407 q~g~~~~-~a~~~~Gs~aviRReaLeeVGGfd~~titED~dlslRL~~~Gyrv~yl~~~~a~glaPesl~~~~~QR~RWa 485 (852)
T PRK11498 407 QDGNDMW-DATFFCGSCAVIRRKPLDEIGGIAVETVTEDAHTSLRLHRRGYTSAYMRIPQAAGLATESLSAHIGQRIRWA 485 (852)
T ss_pred HhHHHhh-cccccccceeeeEHHHHHHhcCCCCCccCccHHHHHHHHHcCCEEEEEeccceeEECCCCHHHHHHHHHHHH
Confidence 2222211 222368999999999999999999988999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHhChhhhhcCcchhhcc
Q 011596 455 SGPMQLFRLCLPDIIRAKVYILSNT 479 (482)
Q Consensus 455 ~G~~q~~~~~~~~i~~s~~~~~~k~ 479 (482)
+|.+|+++++.| +.++++++.+|+
T Consensus 486 rG~lQi~r~~~p-l~~~gL~~~qRl 509 (852)
T PRK11498 486 RGMVQIFRLDNP-LTGKGLKLAQRL 509 (852)
T ss_pred HHHHHHHHHhCh-hccCCCCHHHHH
Confidence 999999998765 556788888876
|
|
| >TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming) | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-41 Score=367.98 Aligned_cols=320 Identities=31% Similarity=0.407 Sum_probs=236.9
Q ss_pred chhhHhHHHHHHHHHHHHhhHhhccchHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccCCCC
Q 011596 140 SPLAIKGAFDLLYSSWVLVRVHYLAPPLQFLAN-ACIVLFLIQSLDRLILCLGCFWIRFKRIKPVPKHDDTSDLESGQKG 218 (482)
Q Consensus 140 ~~~~~~~~~~~~y~~w~~~r~~~~~~~l~~~~~-~~~~lf~i~~~~~l~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~ 218 (482)
+++.+..+...+|++| |...+++.-..+.. +.+.+++...+..+...++++....+..++. ... +.+.+
T Consensus 59 ~~~~~~~~~~~~y~~w---r~~~tl~~~~~~~~~~~~~l~~~e~~~~~~~~~~~~~~~~~~~r~~-~~~------~~~~~ 128 (713)
T TIGR03030 59 LLLVLSVFISLRYLWW---RLTETLPFDNTLNFIFGTLLLLAELYSITILLLGYFQTVRPLDRTP-VPL------PLDPE 128 (713)
T ss_pred HHHHHHHHHHHHHHHh---heeeecCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCc-cCC------CCCcc
Confidence 4667777778999999 66677765333322 3445555665666666666665443221211 111 11223
Q ss_pred CCCeEEEEeecCCch-HHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHH--------------HHHHHHHHHHhhhCCCe
Q 011596 219 FFPMVLVQIPMCNEK-EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTA--------------QTLIKEEVLKWQEAGAN 283 (482)
Q Consensus 219 ~~P~VsViIP~yne~-~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t--------------~~~~~~~~~~~~~~~v~ 283 (482)
..|+|+|+||+|||+ +.+++|+.++++|+||.++++|+|+||+|+|.+ .+.+++..+ +.+
T Consensus 129 ~~P~VsViIP~yNE~~~iv~~tl~s~~~~dYP~~~~eIiVvDDgStD~t~~~~~~~~~~~~~~~~~~~~l~~---~~~-- 203 (713)
T TIGR03030 129 EWPTVDVFIPTYNEDLEIVATTVLAAKNMDYPADKFRVWILDDGGTDQKRNDPDPEQAEAAQRREELKEFCR---KLG-- 203 (713)
T ss_pred cCCeeEEEEcCCCCCHHHHHHHHHHHHhCCCCccceEEEEEECcCCccccccchhhhhhhhhhHHHHHHHHH---HcC--
Confidence 689999999999998 566889999999999988899999999987765 122333333 334
Q ss_pred EEEEeccCCCCCccccHHHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCC---ChH-
Q 011596 284 IVYRHRILRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDE---NLL- 359 (482)
Q Consensus 284 vv~~~~~~~~g~Ka~aln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~---~~~- 359 (482)
+.|..++++.|+|++|+|.|++ .+++|||+++|||++++||+|++++..|.+||++++||+++.+.|.+. +..
T Consensus 204 v~yi~r~~n~~~KAgnLN~al~---~a~gd~Il~lDAD~v~~pd~L~~~v~~f~~dp~v~~Vqtp~~f~~p~~~~~nl~~ 280 (713)
T TIGR03030 204 VNYITRPRNVHAKAGNINNALK---HTDGELILIFDADHVPTRDFLQRTVGWFVEDPKLFLVQTPHFFVSPDPIERNLGT 280 (713)
T ss_pred cEEEECCCCCCCChHHHHHHHH---hcCCCEEEEECCCCCcChhHHHHHHHHHHhCCCEEEEeCCeeccCCCHHhhhhHH
Confidence 4556677788889999999999 589999999999999999999999999987899999999988776542 111
Q ss_pred -HHHHhhhhhhhhhhhhhhccccccccccccceEeeeHHHHHHcCCCCCCCchhHHHHHHHHHHCCCcEEEeccceeccc
Q 011596 360 -TRLQDINLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEDSGGWMERTTVEDMDIAVRAHLRGWKFIFLNDVECQCE 438 (482)
Q Consensus 360 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~iGgf~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~ 438 (482)
....+.. ...+...+...... +...++|+++++||++++++|||++..++||++++.+++++||++.|++++.++++
T Consensus 281 ~~~~~~e~-~~f~~~i~~g~~~~-~~~~~~Gs~~~iRR~al~~iGGf~~~~vtED~~l~~rL~~~G~~~~y~~~~~~~g~ 358 (713)
T TIGR03030 281 FRRMPNEN-ELFYGLIQDGNDFW-NAAFFCGSAAVLRREALDEIGGIAGETVTEDAETALKLHRRGWNSAYLDRPLIAGL 358 (713)
T ss_pred HHHhhhHH-HHHHHHHHHHHhhh-CCeeecCceeEEEHHHHHHcCCCCCCCcCcHHHHHHHHHHcCCeEEEecccccccc
Confidence 1111111 11111122221211 22236799999999999999999998999999999999999999999999999999
Q ss_pred CCcCHHHHHHHHHhhhhhhHHHHHHhChhhhhcCcchhhccc
Q 011596 439 LPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRAKVYILSNTS 480 (482)
Q Consensus 439 ~p~t~~~~~~qr~RW~~G~~q~~~~~~~~i~~s~~~~~~k~~ 480 (482)
.|+|++++.+||.||++|.+|+++...| ++++++++.+|+.
T Consensus 359 ~p~sl~~~~~Qr~RWa~G~~qi~~~~~p-l~~~gl~~~qrl~ 399 (713)
T TIGR03030 359 APETLSGHIGQRIRWAQGMMQIFRLDNP-LLKRGLSFPQRLC 399 (713)
T ss_pred CCCCHHHHHHHHHHHhcChHHHHhhhCc-cccCCCCHHHHHH
Confidence 9999999999999999999999987644 5566888888763
|
Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils. |
| >PRK14583 hmsR N-glycosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-38 Score=328.98 Aligned_cols=241 Identities=21% Similarity=0.316 Sum_probs=205.8
Q ss_pred CCCeEEEEeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccc
Q 011596 219 FFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAG 298 (482)
Q Consensus 219 ~~P~VsViIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~ 298 (482)
..|.|||+||+|||++.+++|++|+++|+||+ ++|+|+||+|+|++.+.+++..++++ +++++ +..++. ||++
T Consensus 73 ~~p~vsViIP~yNE~~~i~~~l~sll~q~yp~--~eIivVdDgs~D~t~~~~~~~~~~~~--~v~vv--~~~~n~-Gka~ 145 (444)
T PRK14583 73 GHPLVSILVPCFNEGLNARETIHAALAQTYTN--IEVIAINDGSSDDTAQVLDALLAEDP--RLRVI--HLAHNQ-GKAI 145 (444)
T ss_pred CCCcEEEEEEeCCCHHHHHHHHHHHHcCCCCC--eEEEEEECCCCccHHHHHHHHHHhCC--CEEEE--EeCCCC-CHHH
Confidence 47899999999999999999999999999996 78999999999999988887766432 34444 333344 4999
Q ss_pred cHHHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHHHHhhhhhhhhhhhhhhc
Q 011596 299 NLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQQVN 378 (482)
Q Consensus 299 aln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (482)
|+|.|++ .+++||++++|||++++||++++++..|.++|++++|++.....+. .++.++.+..++...........
T Consensus 146 AlN~gl~---~a~~d~iv~lDAD~~~~~d~L~~lv~~~~~~~~~g~v~g~~~~~~~-~~~~~~~~~~e~~~~~~~~~~~~ 221 (444)
T PRK14583 146 ALRMGAA---AARSEYLVCIDGDALLDKNAVPYLVAPLIANPRTGAVTGNPRIRTR-STLIGRVQVGEFSSIIGLIKRTQ 221 (444)
T ss_pred HHHHHHH---hCCCCEEEEECCCCCcCHHHHHHHHHHHHhCCCeEEEEccceecCC-CcchhhHHHHHHHHHHHHHHHHH
Confidence 9999999 5899999999999999999999999999888999999998876665 46677777666554444444444
Q ss_pred cccccccccccceEeeeHHHHHHcCCCCCCCchhHHHHHHHHHHCCCcEEEeccceecccCCcCHHHHHHHHHhhhhhhH
Q 011596 379 GVFINFFGFNGTAGVWRIKALEDSGGWMERTTVEDMDIAVRAHLRGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPM 458 (482)
Q Consensus 379 ~~~~~~~~~~G~~~~~Rr~~l~~iGgf~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~~~~~qr~RW~~G~~ 458 (482)
...+..++++|+++++||++++++|||+++.++||.+++.++..+||++.|.|++.++++.|+|++++.+||.||++|.+
T Consensus 222 ~~~g~~~~~sG~~~~~rr~al~~vGg~~~~~i~ED~dl~~rl~~~G~~i~~~p~a~~~~~~p~t~~~~~~Qr~RW~~G~~ 301 (444)
T PRK14583 222 RVYGQVFTVSGVVAAFRRRALADVGYWSPDMITEDIDISWKLQLKHWSVFFEPRGLCWILMPETLRGLWKQRLRWAQGGA 301 (444)
T ss_pred HHhCCceEecCceeEEEHHHHHHcCCCCCCcccccHHHHHHHHHcCCeEEEeeccEEeeeCCCCHHHHHHHHHHHhCcHH
Confidence 44445666789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhChhhhh
Q 011596 459 QLFRLCLPDIIR 470 (482)
Q Consensus 459 q~~~~~~~~i~~ 470 (482)
|.+.+++..+.+
T Consensus 302 ~~~~~~~~~~~~ 313 (444)
T PRK14583 302 EVFLKNMFKLWR 313 (444)
T ss_pred HHHHHHHHHHhC
Confidence 999887776654
|
|
| >PRK11204 N-glycosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-38 Score=328.43 Aligned_cols=242 Identities=24% Similarity=0.390 Sum_probs=205.1
Q ss_pred CCCeEEEEeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccc
Q 011596 219 FFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAG 298 (482)
Q Consensus 219 ~~P~VsViIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~ 298 (482)
..|+|+|+||+|||++.+++|++|+.+|+||+ ++|+|+||+|+|++.+.+++..++++ ++.+.+..++.| |++
T Consensus 52 ~~p~vsViIp~yne~~~i~~~l~sl~~q~yp~--~eiiVvdD~s~d~t~~~l~~~~~~~~----~v~~i~~~~n~G-ka~ 124 (420)
T PRK11204 52 EYPGVSILVPCYNEGENVEETISHLLALRYPN--YEVIAINDGSSDNTGEILDRLAAQIP----RLRVIHLAENQG-KAN 124 (420)
T ss_pred CCCCEEEEEecCCCHHHHHHHHHHHHhCCCCC--eEEEEEECCCCccHHHHHHHHHHhCC----cEEEEEcCCCCC-HHH
Confidence 57899999999999999999999999999996 77999999999999988887665432 344444444555 999
Q ss_pred cHHHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHHHHhhhhhhhhhhhhhhc
Q 011596 299 NLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQQVN 378 (482)
Q Consensus 299 aln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (482)
|+|.|++ .+++||++++|+|+.++||+|++++..|+++|++++|++.....+. .++..+.+..++...........
T Consensus 125 aln~g~~---~a~~d~i~~lDaD~~~~~d~L~~l~~~~~~~~~v~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 200 (420)
T PRK11204 125 ALNTGAA---AARSEYLVCIDGDALLDPDAAAYMVEHFLHNPRVGAVTGNPRIRNR-STLLGRIQVGEFSSIIGLIKRAQ 200 (420)
T ss_pred HHHHHHH---HcCCCEEEEECCCCCCChhHHHHHHHHHHhCCCeEEEECCceeccc-hhHHHHHHHHHHHHhhhHHHHHH
Confidence 9999999 5899999999999999999999999999888999999998877665 45666666555544333333333
Q ss_pred cccccccccccceEeeeHHHHHHcCCCCCCCchhHHHHHHHHHHCCCcEEEeccceecccCCcCHHHHHHHHHhhhhhhH
Q 011596 379 GVFINFFGFNGTAGVWRIKALEDSGGWMERTTVEDMDIAVRAHLRGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPM 458 (482)
Q Consensus 379 ~~~~~~~~~~G~~~~~Rr~~l~~iGgf~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~~~~~qr~RW~~G~~ 458 (482)
...+...+++|+++++||++++++|||++..++||.+++.+++++||++.|.|++.++++.|+|++++.+||.||++|.+
T Consensus 201 ~~~~~~~~~~G~~~~~rr~~l~~vgg~~~~~~~ED~~l~~rl~~~G~~i~~~p~~~~~~~~p~t~~~~~~Qr~RW~~G~~ 280 (420)
T PRK11204 201 RVYGRVFTVSGVITAFRKSALHEVGYWSTDMITEDIDISWKLQLRGWDIRYEPRALCWILMPETLKGLWKQRLRWAQGGA 280 (420)
T ss_pred HHhCCceEecceeeeeeHHHHHHhCCCCCCcccchHHHHHHHHHcCCeEEeccccEEEeECcccHHHHHHHHHHHhcCHH
Confidence 44445556789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhChhhhhc
Q 011596 459 QLFRLCLPDIIRA 471 (482)
Q Consensus 459 q~~~~~~~~i~~s 471 (482)
|.++++.+..++.
T Consensus 281 ~~l~~~~~~~~~~ 293 (420)
T PRK11204 281 EVLLKNFRRLWRW 293 (420)
T ss_pred HHHHHHHHHhcCc
Confidence 9999887766653
|
|
| >cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-38 Score=298.95 Aligned_cols=232 Identities=50% Similarity=0.887 Sum_probs=194.9
Q ss_pred CeEEEEeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccH
Q 011596 221 PMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNL 300 (482)
Q Consensus 221 P~VsViIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~al 300 (482)
|+||||||+|||++.|.++|+|+++|+||.++++|+|+|| |+|.+.+++++...++...++++.+..+..+.|+|++++
T Consensus 1 p~vSViIp~yNe~~~l~~~L~sl~~q~~~~~~~eIiVvD~-s~D~t~~~~~~~~~~~~~~~~~i~~~~~~~~~G~k~~a~ 79 (232)
T cd06437 1 PMVTVQLPVFNEKYVVERLIEAACALDYPKDRLEIQVLDD-STDETVRLAREIVEEYAAQGVNIKHVRRADRTGYKAGAL 79 (232)
T ss_pred CceEEEEecCCcHHHHHHHHHHHHhcCCCccceEEEEEEC-CCCcHHHHHHHHHHHHhhcCCceEEEECCCCCCCchHHH
Confidence 5799999999999999999999999999988889999998 556666777777666655567777766666778899999
Q ss_pred HHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHHHHhhhhhhhhhhhhhhccc
Q 011596 301 KSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQQVNGV 380 (482)
Q Consensus 301 n~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (482)
|.|++ .+++|||+++|+|+.++|++|+++...+. +|++++|++.....+.+.++..+.+.+.+...+...+.....
T Consensus 80 n~g~~---~a~~~~i~~~DaD~~~~~~~l~~~~~~~~-~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (232)
T cd06437 80 AEGMK---VAKGEYVAIFDADFVPPPDFLQKTPPYFA-DPKLGFVQTRWGHINANYSLLTRVQAMSLDYHFTIEQVARSS 155 (232)
T ss_pred HHHHH---hCCCCEEEEEcCCCCCChHHHHHhhhhhc-CCCeEEEecceeeEcCCCchhhHhhhhhHHhhhhHhHhhHhh
Confidence 99999 68999999999999999999999887775 699999999887777777777776665444333333222222
Q ss_pred cccccccccceEeeeHHHHHHcCCCCCCCchhHHHHHHHHHHCCCcEEEeccceecccCCcCHHHHHHHHHhhhhhh
Q 011596 381 FINFFGFNGTAGVWRIKALEDSGGWMERTTVEDMDIAVRAHLRGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGP 457 (482)
Q Consensus 381 ~~~~~~~~G~~~~~Rr~~l~~iGgf~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~~~~~qr~RW~~G~ 457 (482)
.....+++|+++++||++++++|||++....||++++.|+..+||++.|.|++.++++.|+|++++.+||.||++|.
T Consensus 156 ~~~~~~~~g~~~~~rr~~~~~vgg~~~~~~~ED~~l~~rl~~~G~~~~~~~~~~v~~~~~~~~~~~~~q~~rW~~g~ 232 (232)
T cd06437 156 TGLFFNFNGTAGVWRKECIEDAGGWNHDTLTEDLDLSYRAQLKGWKFVYLDDVVVPAELPASMSAYRSQQHRWSKGP 232 (232)
T ss_pred cCCeEEeccchhhhhHHHHHHhCCCCCCcchhhHHHHHHHHHCCCeEEEeccceeeeeCCcCHHHHHHHHHHhccCC
Confidence 22334468889999999999999999888899999999999999999999999999999999999999999999984
|
Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we |
| >TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-36 Score=314.12 Aligned_cols=251 Identities=16% Similarity=0.247 Sum_probs=197.3
Q ss_pred CCCeEEEEeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccc
Q 011596 219 FFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAG 298 (482)
Q Consensus 219 ~~P~VsViIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~ 298 (482)
..|.|||+||+|||++.+.+||+|+.+|+||+++++|+|+||+|+|++.+++++..++++ ++.+++. + .++||++
T Consensus 47 ~~P~vsVIIP~yNe~~~l~~~l~sl~~q~yp~~~~eIiVVDd~StD~T~~il~~~~~~~~--~v~v~~~--~-~~~Gka~ 121 (439)
T TIGR03111 47 KLPDITIIIPVYNSEDTLFNCIESIYNQTYPIELIDIILANNQSTDDSFQVFCRAQNEFP--GLSLRYM--N-SDQGKAK 121 (439)
T ss_pred CCCCEEEEEEeCCChHHHHHHHHHHHhcCCCCCCeEEEEEECCCChhHHHHHHHHHHhCC--CeEEEEe--C-CCCCHHH
Confidence 579999999999999999999999999999998899999999999999998877665433 3444322 2 3456999
Q ss_pred cHHHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecC----CCC----hHHHHHhhhhhhh
Q 011596 299 NLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNK----DEN----LLTRLQDINLSFH 370 (482)
Q Consensus 299 aln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~----~~~----~~~~~~~~~~~~~ 370 (482)
|+|.|++ .+++|||+++|+|+.++||++++++..|.++|++++++|....... ..+ +..+.+..++...
T Consensus 122 AlN~gl~---~s~g~~v~~~DaD~~~~~d~L~~l~~~f~~~~~v~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~ 198 (439)
T TIGR03111 122 ALNAAIY---NSIGKYIIHIDSDGKLHKDAIKNMVTRFENNPDIHAMTGVILTDKELIEKTKGRFLKLIRRCEYFEYAQA 198 (439)
T ss_pred HHHHHHH---HccCCEEEEECCCCCcChHHHHHHHHHHHhCCCeEEEEeEEecCchhhhhhcchhhhHhHHhHHHHHHHH
Confidence 9999999 5889999999999999999999999999888999999887643211 011 1111111222211
Q ss_pred hhhhhhhccccccccccccceEeeeHHHHHHcCCCCCCCchhHHHHHHHHH-HCCCcEEEeccceecccCCcCHHHHHHH
Q 011596 371 FEVEQQVNGVFINFFGFNGTAGVWRIKALEDSGGWMERTTVEDMDIAVRAH-LRGWKFIFLNDVECQCELPESYEAYRKQ 449 (482)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~iGgf~~~~~~ED~~l~~rl~-~~G~ki~~~~~~~~~~~~p~t~~~~~~q 449 (482)
+...+...+.....+.++|+++++||++++++|||++..++||.+++.++. ..|+++.|+|++.++++.|+|++++.+|
T Consensus 199 ~l~~r~~~s~~~~~~~~sGa~~~~Rr~~l~~vggf~~~~i~ED~~l~~rl~~~~g~kv~~~~~a~~~~~~p~t~~~~~~Q 278 (439)
T TIGR03111 199 FLAGRNFESQVNSLFTLSGAFSAFRRETILKTQLYNSETVGEDTDMTFQIRELLDGKVYLCENAIFYVDPIDGLNKLYTQ 278 (439)
T ss_pred HHhhhHHHHhcCCeEEEccHHHhhhHHHHHHhCCCCCCCcCccHHHHHHHHHhcCCeEEECCCCEEEEECCcCHHHHHHH
Confidence 111111222223445578999999999999999999989999999999996 4699999999999999999999999999
Q ss_pred HHhhhhhhHHHHHHhChhhhhcCcchhh
Q 011596 450 QHRWHSGPMQLFRLCLPDIIRAKVYILS 477 (482)
Q Consensus 450 r~RW~~G~~q~~~~~~~~i~~s~~~~~~ 477 (482)
|.||.+|.+|.++.+.+...++...+.+
T Consensus 279 R~RW~rG~~qv~~~~~~~~~~~~~~~~~ 306 (439)
T TIGR03111 279 RQRWQRGELEVSHMFFESANKSIKGFFS 306 (439)
T ss_pred HHHHhccHHHHHHHHHhhhhhchhhhhh
Confidence 9999999999998877655555444433
|
Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602). |
| >PRK05454 glucosyltransferase MdoH; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-35 Score=315.76 Aligned_cols=296 Identities=20% Similarity=0.189 Sum_probs=218.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccCCCCCCCeEEEEeecCCch-----HHHHHHHHHHHhCC
Q 011596 173 ACIVLFLIQSLDRLILCLGCFWIRFKRIKPVPKHDDTSDLESGQKGFFPMVLVQIPMCNEK-----EVYQQSIAAVCNLD 247 (482)
Q Consensus 173 ~~~~lf~i~~~~~l~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~P~VsViIP~yne~-----~~l~~tL~Sll~q~ 247 (482)
++.++|....+......+|++.... ++.+.....+...+ ......|+|+|+||+|||+ +.++.+++|+.+|+
T Consensus 79 lf~~~~~w~~~~~~~a~~g~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~VaVliP~yNEd~~~v~~~L~a~~~Sl~~~~ 155 (691)
T PRK05454 79 LFALLFAWISLGFWTALMGFLQLLR-GRDKYSISASAAGD--PPPPPEARTAILMPIYNEDPARVFAGLRAMYESLAATG 155 (691)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc-cCCcccCCcccccC--CCCCCCCceEEEEeCCCCChHHHHHHHHHHHHHHHhcC
Confidence 3344555555555666667654432 22222111110011 1112578999999999998 36899999999999
Q ss_pred CCCCceEEEEEcCCCCHHHHHHH----HHHHHHhhhCCCeEEEEeccCCCCCccccHHHHhhhcccCCceEEEEEcCCCC
Q 011596 248 WPKSKILIQVLDDSDDPTAQTLI----KEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQ 323 (482)
Q Consensus 248 yp~~~~~IiVvDdssdd~t~~~~----~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al~~~~~a~~d~Vl~lDaD~~ 323 (482)
|++ +++|+|+||++|+.+...- +++.++++ .+.++.|+++.+|.|.|++|+|.+++.. ..++||++++|||++
T Consensus 156 ~~~-~~e~~vLdD~~d~~~~~~e~~~~~~L~~~~~-~~~~i~yr~R~~n~~~KaGNl~~~~~~~-~~~~eyivvLDADs~ 232 (691)
T PRK05454 156 HGA-HFDFFILSDTRDPDIAAAEEAAWLELRAELG-GEGRIFYRRRRRNVGRKAGNIADFCRRW-GGAYDYMVVLDADSL 232 (691)
T ss_pred CCC-CEEEEEEECCCChhHHHHHHHHHHHHHHhcC-CCCcEEEEECCcCCCccHHHHHHHHHhc-CCCcCEEEEEcCCCC
Confidence 975 6899999999999876532 23344433 2568889989999999999999999842 367899999999999
Q ss_pred CChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHHHHhhhhhhhhhhhhhhcc-ccccccccccceEeeeHHHHHHc
Q 011596 324 PNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQQVNG-VFINFFGFNGTAGVWRIKALEDS 402 (482)
Q Consensus 324 ~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~G~~~~~Rr~~l~~i 402 (482)
+++|++.+++..|+.||++|+||+.+...|.+ +++++++.+....+......... +..+...+.|++.++|++++.++
T Consensus 233 m~~d~L~~lv~~m~~dP~vGlVQt~~~~~n~~-slfaR~qqf~~~~y~~~~~~G~~~w~~~~g~f~G~naIiR~~af~~~ 311 (691)
T PRK05454 233 MSGDTLVRLVRLMEANPRAGLIQTLPVAVGAD-TLFARLQQFATRVYGPLFAAGLAWWQGGEGNYWGHNAIIRVKAFAEH 311 (691)
T ss_pred CCHHHHHHHHHHHhhCcCEEEEeCCccCcCCC-CHHHHHHHHHHHHHHHHHHhhhhhhccCccccccceEEEEHHHHHHh
Confidence 99999999999998899999999998888874 88999887644333222211111 11122337899999999999986
Q ss_pred C---------CCCCCCchhHHHHHHHHHHCCCcEEEecc-ceecccCCcCHHHHHHHHHhhhhhhHHHHHHhChhhhhcC
Q 011596 403 G---------GWMERTTVEDMDIAVRAHLRGWKFIFLND-VECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRAK 472 (482)
Q Consensus 403 G---------gf~~~~~~ED~~l~~rl~~~G~ki~~~~~-~~~~~~~p~t~~~~~~qr~RW~~G~~q~~~~~~~~i~~s~ 472 (482)
+ +|..+.++||++++.+++++||++.|+|+ ..++++.|+|+.++.+||.||++|++|.++.. .+.+
T Consensus 312 ~glp~L~g~~p~~~~~LseD~~~a~~l~~~GyrV~~~pd~~~~~ee~P~tl~~~~~qr~RW~~G~lQ~l~~l----~~~g 387 (691)
T PRK05454 312 CGLPPLPGRGPFGGHILSHDFVEAALMRRAGWGVWLAPDLPGSYEELPPNLLDELKRDRRWCQGNLQHLRLL----LAKG 387 (691)
T ss_pred cCCccccccCCCCCCcccHHHHHHHHHHHCCCEEEEcCccccccccCCCCHHHHHHHHHHHHhchHHHHHHH----HhcC
Confidence 4 45566889999999999999999999999 56899999999999999999999999987653 2344
Q ss_pred cchhhcc
Q 011596 473 VYILSNT 479 (482)
Q Consensus 473 ~~~~~k~ 479 (482)
+++..|.
T Consensus 388 l~~~~R~ 394 (691)
T PRK05454 388 LHPVSRL 394 (691)
T ss_pred CCHHHHH
Confidence 5555543
|
|
| >cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-36 Score=288.17 Aligned_cols=238 Identities=26% Similarity=0.395 Sum_probs=190.9
Q ss_pred CeEEEEeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccH
Q 011596 221 PMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNL 300 (482)
Q Consensus 221 P~VsViIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~al 300 (482)
|.|||+||+|||++.+.++|+|+++|+||++.++|+|+||+|+|.+.+++++... ....+++..... .+.||+.++
T Consensus 1 p~vsIiIp~~Ne~~~l~~~l~sl~~~~y~~~~~eiivVdd~s~d~t~~i~~~~~~---~~~~~i~~~~~~-~~~G~~~a~ 76 (241)
T cd06427 1 PVYTILVPLYKEAEVLPQLIASLSALDYPRSKLDVKLLLEEDDEETIAAARALRL---PSIFRVVVVPPS-QPRTKPKAC 76 (241)
T ss_pred CeEEEEEecCCcHHHHHHHHHHHHhCcCCcccEEEEEEECCCCchHHHHHHHhcc---CCCeeEEEecCC-CCCchHHHH
Confidence 6899999999999999999999999999987899999999999999888775422 123555554333 334599999
Q ss_pred HHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcC-CCeEEEeeeeeeecCCCChHHHHHhhhhhhhhhhhhhhcc
Q 011596 301 KSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDN-EELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQQVNG 379 (482)
Q Consensus 301 n~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~-p~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (482)
|.|++ .+++|||+++|+|++++|+++.+++..|.++ ++++++++.....+...++..+.....+...+........
T Consensus 77 n~g~~---~a~gd~i~~~DaD~~~~~~~l~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (241)
T cd06427 77 NYALA---FARGEYVVIYDAEDAPDPDQLKKAVAAFARLDDKLACVQAPLNYYNARENWLTRMFALEYAAWFDYLLPGLA 153 (241)
T ss_pred HHHHH---hcCCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEeCceEeeCCCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999 6899999999999999999999999999764 8999999987777665666655444333222211111111
Q ss_pred ccccccccccceEeeeHHHHHHcCCCCCCCchhHHHHHHHHHHCCCcEEEeccceecccCCcCHHHHHHHHHhhhhhhHH
Q 011596 380 VFINFFGFNGTAGVWRIKALEDSGGWMERTTVEDMDIAVRAHLRGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQ 459 (482)
Q Consensus 380 ~~~~~~~~~G~~~~~Rr~~l~~iGgf~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~~~~~qr~RW~~G~~q 459 (482)
.......++|+++++||++++++|||++....||++++.|+..+||++.+++.+ ++++.|+|++.+.+||.||.+|.+|
T Consensus 154 ~~~~~~~~~g~~~~~rr~~~~~vgg~~~~~~~eD~~l~~rl~~~G~r~~~~~~~-~~~~~~~~~~~~~~q~~Rw~~g~~~ 232 (241)
T cd06427 154 RLGLPIPLGGTSNHFRTDVLRELGGWDPFNVTEDADLGLRLARAGYRTGVLNST-TLEEANNALGNWIRQRSRWIKGYMQ 232 (241)
T ss_pred hcCCeeecCCchHHhhHHHHHHcCCCCcccchhhHHHHHHHHHCCceEEEeccc-ccccCcHhHHHHHHHHHHHhccHHH
Confidence 122333467889999999999999999888899999999999999999999875 4788999999999999999999999
Q ss_pred HHHHhCh
Q 011596 460 LFRLCLP 466 (482)
Q Consensus 460 ~~~~~~~ 466 (482)
+++.+.+
T Consensus 233 ~~~~~~~ 239 (241)
T cd06427 233 TWLVHMR 239 (241)
T ss_pred HHHHHhh
Confidence 9987643
|
The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot |
| >cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-34 Score=279.12 Aligned_cols=233 Identities=21% Similarity=0.272 Sum_probs=188.1
Q ss_pred EEEEeecCCchH-HHHHHHHHHHh----CCCCCCceEEEEEcCCCCHHHHHH----HHHHHHHhhhCCCeEEEEeccCCC
Q 011596 223 VLVQIPMCNEKE-VYQQSIAAVCN----LDWPKSKILIQVLDDSDDPTAQTL----IKEEVLKWQEAGANIVYRHRILRD 293 (482)
Q Consensus 223 VsViIP~yne~~-~l~~tL~Sll~----q~yp~~~~~IiVvDdssdd~t~~~----~~~~~~~~~~~~v~vv~~~~~~~~ 293 (482)
|||+||+|||+. .+.++|.++++ |+|++ +++|+|+||++|+..... +.++.+++++ ++++++.+++++.
T Consensus 1 ~SIliP~~ne~~~~l~~~l~~~~~~~~~~~~~~-~~eI~vldD~~d~~~~~~~~~~~~~l~~~~~~-~~~v~~~~r~~~~ 78 (254)
T cd04191 1 TAIVMPVYNEDPARVFAGLRAMYESLAKTGLAD-HFDFFILSDTRDPDIWLAEEAAWLDLCEELGA-QGRIYYRRRRENT 78 (254)
T ss_pred CEEEEeCCCCCHHHHHHHHHHHHHHHHhcCCcC-ceEEEEECCCCChHHHHHHHHHHHHHHHHhCC-CCcEEEEEcCCCC
Confidence 699999999994 58999998875 77733 488999999999875432 2234555554 7889999999999
Q ss_pred CCccccHHHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHHHHhhhhhhhhhh
Q 011596 294 GYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHFEV 373 (482)
Q Consensus 294 g~Ka~aln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 373 (482)
|.|++|+|.++... .+++|||+++|||+.++||+|.++++.|..||++++||+++.+.|.+ +++++++.++.......
T Consensus 79 g~Kag~l~~~~~~~-~~~~~~i~~~DaD~~~~p~~l~~~v~~~~~~~~vg~vq~~~~~~n~~-~~~~~~~~~~~~~~~~~ 156 (254)
T cd04191 79 GRKAGNIADFCRRW-GSRYDYMVVLDADSLMSGDTIVRLVRRMEANPRAGIIQTAPKLIGAE-TLFARLQQFANRLYGPV 156 (254)
T ss_pred CccHHHHHHHHHHh-CCCCCEEEEEeCCCCCCHHHHHHHHHHHHhCCCEEEEeCCceeECCC-CHHHHHHHHHHHHHHHH
Confidence 99999999999731 26889999999999999999999999998789999999999988874 78888887664333332
Q ss_pred hhhhccc-cccccccccceEeeeHHHHHHc---------CCCCCCCchhHHHHHHHHHHCCCcEEEeccce-ecccCCcC
Q 011596 374 EQQVNGV-FINFFGFNGTAGVWRIKALEDS---------GGWMERTTVEDMDIAVRAHLRGWKFIFLNDVE-CQCELPES 442 (482)
Q Consensus 374 ~~~~~~~-~~~~~~~~G~~~~~Rr~~l~~i---------Ggf~~~~~~ED~~l~~rl~~~G~ki~~~~~~~-~~~~~p~t 442 (482)
....... ......+.|+++++||++++++ |+|..+.++||+++++++..+||++.|.|++. ++++.|++
T Consensus 157 ~~~~~~~~~~~~~~~~G~~~~~Rr~al~~~~~~~~i~g~g~~~~~~l~eD~~l~~~~~~~G~ri~~~~~~~~~~~~~p~~ 236 (254)
T cd04191 157 FGRGLAAWQGGEGNYWGHNAIIRVAAFMEHCALPVLPGRPPFGGHILSHDFVEAALMRRAGWEVRLAPDLEGSYEECPPT 236 (254)
T ss_pred HHHHHHHhcCCccCccceEEEEEHHHHHHhcCCccccCCCCCCCCeecHHHHHHHHHHHcCCEEEEccCCcceEeECCCC
Confidence 2222111 1122336799999999999884 34555678999999999999999999999987 58899999
Q ss_pred HHHHHHHHHhhhhhhHH
Q 011596 443 YEAYRKQQHRWHSGPMQ 459 (482)
Q Consensus 443 ~~~~~~qr~RW~~G~~q 459 (482)
+.++++||.||++|.+|
T Consensus 237 ~~~~~~qr~RW~~G~~q 253 (254)
T cd04191 237 LIDFLKRDRRWCQGNLQ 253 (254)
T ss_pred HHHHHHHHHHHHhhcCc
Confidence 99999999999999987
|
Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane. |
| >COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-34 Score=299.72 Aligned_cols=236 Identities=30% Similarity=0.504 Sum_probs=201.9
Q ss_pred CCeEEEEeecCCchH-HHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccc
Q 011596 220 FPMVLVQIPMCNEKE-VYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAG 298 (482)
Q Consensus 220 ~P~VsViIP~yne~~-~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~ 298 (482)
.|+|+|+||+|||++ ++++|+.|+.+|+||+ ++|+|+||+++|.+.+++++...+++ ..+++++. ..++++|++
T Consensus 53 ~p~vsviiP~ynE~~~~~~~~l~s~~~~dyp~--~evivv~d~~~d~~~~~~~~~~~~~~-~~~~~~~~--~~~~~gK~~ 127 (439)
T COG1215 53 LPKVSVIIPAYNEEPEVLEETLESLLSQDYPR--YEVIVVDDGSTDETYEILEELGAEYG-PNFRVIYP--EKKNGGKAG 127 (439)
T ss_pred CCceEEEEecCCCchhhHHHHHHHHHhCCCCC--ceEEEECCCCChhHHHHHHHHHhhcC-cceEEEec--cccCccchH
Confidence 599999999999996 9999999999999998 77999999999999999998877553 23444311 345667999
Q ss_pred cHHHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCC--CChHHHHHhhhhhhhhhhhhh
Q 011596 299 NLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKD--ENLLTRLQDINLSFHFEVEQQ 376 (482)
Q Consensus 299 aln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~--~~~~~~~~~~~~~~~~~~~~~ 376 (482)
++|.|+. .+++|+|+++|||+.++||+|.++++.|.+ ++.+++++.....+.. .+++++.+.+++.........
T Consensus 128 al~~~l~---~~~~d~V~~~DaD~~~~~d~l~~~~~~f~~-~~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 203 (439)
T COG1215 128 ALNNGLK---RAKGDVVVILDADTVPEPDALRELVSPFED-PPVGAVVGTPRIRNRPDPSNLLGRIQAIEYLSAFYFRLR 203 (439)
T ss_pred HHHHHHh---hcCCCEEEEEcCCCCCChhHHHHHHhhhcC-CCeeEEeCCceeeecCChhhhcchhcchhhhhhHHHhhh
Confidence 9999999 578999999999999999999999999996 5555666666555554 678888888877665555444
Q ss_pred hccccccccccccceEeeeHHHHHHcCCCCCCCchhHHHHHHHHHHCCCcEEEeccceecccCCcCHHHHHHHHHhhhhh
Q 011596 377 VNGVFINFFGFNGTAGVWRIKALEDSGGWMERTTVEDMDIAVRAHLRGWKFIFLNDVECQCELPESYEAYRKQQHRWHSG 456 (482)
Q Consensus 377 ~~~~~~~~~~~~G~~~~~Rr~~l~~iGgf~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~~~~~qr~RW~~G 456 (482)
.....+....+.|++.++||++++++|||.+..++||.+++.+++.+||++.|++++.++++.|+|+.++++||.||++|
T Consensus 204 ~~~~~g~~~~~~G~~~~~rr~aL~~~g~~~~~~i~ED~~lt~~l~~~G~~~~~~~~~~~~~~~p~t~~~~~~Qr~RW~~g 283 (439)
T COG1215 204 AASKGGLISFLSGSSSAFRRSALEEVGGWLEDTITEDADLTLRLHLRGYRVVYVPEAIVWTEAPETLKELWRQRLRWARG 283 (439)
T ss_pred hhhhcCCeEEEcceeeeEEHHHHHHhCCCCCCceeccHHHHHHHHHCCCeEEEeecceEeeeCcccHHHHHHHHHHHHcc
Confidence 44444456668999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHh
Q 011596 457 PMQLFRLC 464 (482)
Q Consensus 457 ~~q~~~~~ 464 (482)
.+|.+..+
T Consensus 284 ~~~~~~~~ 291 (439)
T COG1215 284 GLQVLLLH 291 (439)
T ss_pred cceeeehh
Confidence 99998765
|
|
| >TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-33 Score=289.06 Aligned_cols=234 Identities=18% Similarity=0.252 Sum_probs=182.2
Q ss_pred CCCeEEEEeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccc
Q 011596 219 FFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAG 298 (482)
Q Consensus 219 ~~P~VsViIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~ 298 (482)
..|+|||+||+|||++.+++||+|+++|+||+ +||+|+||+++|.+.+++++..+++++..++++....+.+.++|.+
T Consensus 39 ~~p~VSViiP~~nee~~l~~~L~Sl~~q~Yp~--~EIivvdd~s~D~t~~iv~~~~~~~p~~~i~~v~~~~~~G~~~K~~ 116 (373)
T TIGR03472 39 AWPPVSVLKPLHGDEPELYENLASFCRQDYPG--FQMLFGVQDPDDPALAVVRRLRADFPDADIDLVIDARRHGPNRKVS 116 (373)
T ss_pred CCCCeEEEEECCCCChhHHHHHHHHHhcCCCC--eEEEEEeCCCCCcHHHHHHHHHHhCCCCceEEEECCCCCCCChHHH
Confidence 47899999999999999999999999999997 7788999999999999998888877655555553222223335888
Q ss_pred cHHHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHHHHhhhhhhhhhhhhhhc
Q 011596 299 NLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQQVN 378 (482)
Q Consensus 299 aln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (482)
|++.+++ .+++|+++++|+|+.++||+|++++..|+ +|++++|++..... ...++..+.........+.......
T Consensus 117 ~l~~~~~---~a~ge~i~~~DaD~~~~p~~L~~lv~~~~-~~~v~~V~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~ 191 (373)
T TIGR03472 117 NLINMLP---HARHDILVIADSDISVGPDYLRQVVAPLA-DPDVGLVTCLYRGR-PVPGFWSRLGAMGINHNFLPSVMVA 191 (373)
T ss_pred HHHHHHH---hccCCEEEEECCCCCcChhHHHHHHHHhc-CCCcceEeccccCC-CCCCHHHHHHHHHhhhhhhHHHHHH
Confidence 9988888 68999999999999999999999999997 69999999865432 2245555544332211111100011
Q ss_pred cccccccccccceEeeeHHHHHHcCCCCC--CCchhHHHHHHHHHHCCCcEEEeccceecccCCcCHHHHHHHHHhhhhh
Q 011596 379 GVFINFFGFNGTAGVWRIKALEDSGGWME--RTTVEDMDIAVRAHLRGWKFIFLNDVECQCELPESYEAYRKQQHRWHSG 456 (482)
Q Consensus 379 ~~~~~~~~~~G~~~~~Rr~~l~~iGgf~~--~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~~~~~qr~RW~~G 456 (482)
........+.|+++++||++++++|||++ ...+||.+++.++.++|+++.+.+++..++..++|++++++|+.||.++
T Consensus 192 ~~~~~~~~~~G~~~a~RR~~l~~iGGf~~~~~~~~ED~~l~~~i~~~G~~v~~~~~~v~~~~~~~s~~~~~~q~~RW~r~ 271 (373)
T TIGR03472 192 RALGRARFCFGATMALRRATLEAIGGLAALAHHLADDYWLGELVRALGLRVVLAPVVVDTDVHETSFATLLAHELRWSRT 271 (373)
T ss_pred HhccCCccccChhhheeHHHHHHcCChHHhcccchHHHHHHHHHHHcCCeEEecchhhhcCCCccCHHHHHHHHHHHHhh
Confidence 11111222579999999999999999975 4678999999999999999999999888888889999999999999866
Q ss_pred hHH
Q 011596 457 PMQ 459 (482)
Q Consensus 457 ~~q 459 (482)
...
T Consensus 272 ~~~ 274 (373)
T TIGR03472 272 IRA 274 (373)
T ss_pred hhc
Confidence 554
|
This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano |
| >cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-33 Score=269.42 Aligned_cols=231 Identities=33% Similarity=0.496 Sum_probs=184.9
Q ss_pred CeEEEEeecCCch-HHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCcccc
Q 011596 221 PMVLVQIPMCNEK-EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGN 299 (482)
Q Consensus 221 P~VsViIP~yne~-~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~a 299 (482)
|+|||+||+|||+ +.++++|+|+++|+||++.++|+|+||+|+|.+.+++++...++ ++.+.....+.|+|+++
T Consensus 1 p~vsviip~~n~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 75 (234)
T cd06421 1 PTVDVFIPTYNEPLEIVRKTLRAALAIDYPHDKLRVYVLDDGRRPELRALAAELGVEY-----GYRYLTRPDNRHAKAGN 75 (234)
T ss_pred CceEEEEecCCCcHHHHHHHHHHHHhcCCCcccEEEEEEcCCCchhHHHHHHHhhccc-----CceEEEeCCCCCCcHHH
Confidence 6799999999986 78999999999999998778899999999999998888664422 23333455667789999
Q ss_pred HHHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCC-hHHHHHhhhhhhhhhhhhhhc
Q 011596 300 LKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDEN-LLTRLQDINLSFHFEVEQQVN 378 (482)
Q Consensus 300 ln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~-~~~~~~~~~~~~~~~~~~~~~ 378 (482)
+|.|++ .+++|||+++|+|+.++|++|++++..+.++++++++++.....+.+.. +....................
T Consensus 76 ~n~~~~---~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (234)
T cd06421 76 LNNALA---HTTGDFVAILDADHVPTPDFLRRTLGYFLDDPKVALVQTPQFFYNPDPFDWLADGAPNEQELFYGVIQPGR 152 (234)
T ss_pred HHHHHH---hCCCCEEEEEccccCcCccHHHHHHHHHhcCCCeEEEecceEEecCCcchhHHHHHHHHHHHHHHHHHHHH
Confidence 999999 5799999999999999999999999999877999999998766655432 111111111111111111111
Q ss_pred cccccccccccceEeeeHHHHHHcCCCCCCCchhHHHHHHHHHHCCCcEEEeccceecccCCcCHHHHHHHHHhhhhhhH
Q 011596 379 GVFINFFGFNGTAGVWRIKALEDSGGWMERTTVEDMDIAVRAHLRGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPM 458 (482)
Q Consensus 379 ~~~~~~~~~~G~~~~~Rr~~l~~iGgf~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~~~~~qr~RW~~G~~ 458 (482)
.. .+...+.|+++++|+++++++|||++....||.+++.++.++||++.|.|++.++++.|.++..+.+|+.||..|.+
T Consensus 153 ~~-~~~~~~~g~~~~~r~~~~~~ig~~~~~~~~eD~~l~~r~~~~g~~i~~~~~~~~~~~~~~~~~~~~~q~~rw~~~~~ 231 (234)
T cd06421 153 DR-WGAAFCCGSGAVVRREALDEIGGFPTDSVTEDLATSLRLHAKGWRSVYVPEPLAAGLAPETLAAYIKQRLRWARGML 231 (234)
T ss_pred hh-cCCceecCceeeEeHHHHHHhCCCCccceeccHHHHHHHHHcCceEEEecCccccccCCccHHHHHHHHHHHhcCCe
Confidence 11 12333679999999999999999998888999999999999999999999999999999999999999999999988
Q ss_pred HH
Q 011596 459 QL 460 (482)
Q Consensus 459 q~ 460 (482)
+.
T Consensus 232 ~~ 233 (234)
T cd06421 232 QI 233 (234)
T ss_pred ee
Confidence 74
|
Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end. |
| >cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-33 Score=266.82 Aligned_cols=233 Identities=27% Similarity=0.496 Sum_probs=181.0
Q ss_pred EEEeecCCch-HHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHH-HHHHHHHHHhhhCCCeEEEEeccCCCCCccccHH
Q 011596 224 LVQIPMCNEK-EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQ-TLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLK 301 (482)
Q Consensus 224 sViIP~yne~-~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~-~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln 301 (482)
||+||+|||+ +.++++++|+.+|+||+ ++|+|+||+++|.+. +.+++...++ +.++.+....++.|+|++++|
T Consensus 1 siiip~~ne~~~~l~~~l~sl~~q~~~~--~eiiVvdd~s~D~t~~~~i~~~~~~~---~~~i~~i~~~~~~G~~~~a~n 75 (236)
T cd06435 1 SIHVPCYEEPPEMVKETLDSLAALDYPN--FEVIVIDNNTKDEALWKPVEAHCAQL---GERFRFFHVEPLPGAKAGALN 75 (236)
T ss_pred CeeEeeCCCcHHHHHHHHHHHHhCCCCC--cEEEEEeCCCCchhHHHHHHHHHHHh---CCcEEEEEcCCCCCCchHHHH
Confidence 6999999998 89999999999999987 678899998877753 5555555432 234444444556677899999
Q ss_pred HHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHHHHhhhhhhhhhhhhhhcccc
Q 011596 302 SAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQQVNGVF 381 (482)
Q Consensus 302 ~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (482)
.|++.+ ..++|||+++|+|+.++|++|.+++..++ ++++++|++.....+...+.+.+.....+...+...... ...
T Consensus 76 ~g~~~a-~~~~d~i~~lD~D~~~~~~~l~~l~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 152 (236)
T cd06435 76 YALERT-APDAEIIAVIDADYQVEPDWLKRLVPIFD-DPRVGFVQAPQDYRDGEESLFKRMCYAEYKGFFDIGMVS-RNE 152 (236)
T ss_pred HHHHhc-CCCCCEEEEEcCCCCcCHHHHHHHHHHhc-CCCeeEEecCccccCCCccHHHHHHhHHHHHHHHHHhcc-ccc
Confidence 999952 13489999999999999999999999997 699999998765555444444433222221111111111 111
Q ss_pred ccccccccceEeeeHHHHHHcCCCCCCCchhHHHHHHHHHHCCCcEEEeccceecccCCcCHHHHHHHHHhhhhhhHHHH
Q 011596 382 INFFGFNGTAGVWRIKALEDSGGWMERTTVEDMDIAVRAHLRGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLF 461 (482)
Q Consensus 382 ~~~~~~~G~~~~~Rr~~l~~iGgf~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~~~~~qr~RW~~G~~q~~ 461 (482)
.......|+++++||++++++|||++....||.+++.|+.++||++.++|++.+++..|.++.++.+|+.||..|.+|.+
T Consensus 153 ~~~~~~~g~~~~~rr~~~~~iGgf~~~~~~eD~dl~~r~~~~G~~~~~~~~~~~~~~~~~~~~~~~~q~~rw~~g~~~~~ 232 (236)
T cd06435 153 RNAIIQHGTMCLIRRSALDDVGGWDEWCITEDSELGLRMHEAGYIGVYVAQSYGHGLIPDTFEAFKKQRFRWAYGAVQIL 232 (236)
T ss_pred cCceEEecceEEEEHHHHHHhCCCCCccccchHHHHHHHHHCCcEEEEcchhhccCcCcccHHHHHHHHHHHhcchhhhh
Confidence 12233579999999999999999998888999999999999999999999999999999999999999999999999998
Q ss_pred HHh
Q 011596 462 RLC 464 (482)
Q Consensus 462 ~~~ 464 (482)
++|
T Consensus 233 ~~~ 235 (236)
T cd06435 233 KKH 235 (236)
T ss_pred hcc
Confidence 876
|
NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response. |
| >PRK14716 bacteriophage N4 adsorption protein B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-32 Score=285.47 Aligned_cols=285 Identities=18% Similarity=0.178 Sum_probs=201.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccCCCCCCCeEEEEeecCCchHHHHHHHHHHH-hCC
Q 011596 169 FLANACIVLFLIQSLDRLILCLGCFWIRFKRIKPVPKHDDTSDLESGQKGFFPMVLVQIPMCNEKEVYQQSIAAVC-NLD 247 (482)
Q Consensus 169 ~~~~~~~~lf~i~~~~~l~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~P~VsViIP~yne~~~l~~tL~Sll-~q~ 247 (482)
.+..+..+++++..++-+++-+.++.....|........ +.........|+++|+||+|||+++|.++|+|++ +++
T Consensus 17 ~~~~~~~~~~~~~~~ddl~id~~y~~~~~~r~~~~~~~~---~~~~l~~~~~p~vaIlIPA~NE~~vI~~~l~s~L~~ld 93 (504)
T PRK14716 17 VVLLVVAVLILLSGLDDLFIDAVYLARRLYRRRSRIPRL---SLATLRSVPEKRIAIFVPAWREADVIGRMLEHNLATLD 93 (504)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc---ChhhcccCCCCceEEEEeccCchhHHHHHHHHHHHcCC
Confidence 344555666777778888776666544443331111111 1111112257899999999999999999999965 689
Q ss_pred CCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHhhhcc---c---CCceEEEEEcCC
Q 011596 248 WPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSY---V---KDYEFVAIFDAD 321 (482)
Q Consensus 248 yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al~~~~---~---a~~d~Vl~lDaD 321 (482)
||+ ++|+|+||++||.|.+.+++...+++. ++++..++. +..+|++|+|.+++.+. . .++|+|+++|||
T Consensus 94 Y~~--~eIiVv~d~ndd~T~~~v~~l~~~~p~--v~~vv~~~~-gp~~Ka~aLN~~l~~~~~~e~~~G~~~d~vvi~DAD 168 (504)
T PRK14716 94 YEN--YRIFVGTYPNDPATLREVDRLAARYPR--VHLVIVPHD-GPTSKADCLNWIYQAIFAFERERGIRFAIIVLHDAE 168 (504)
T ss_pred CCC--eEEEEEECCCChhHHHHHHHHHHHCCC--eEEEEeCCC-CCCCHHHHHHHHHHHHHHhhhhcCCCcCEEEEEcCC
Confidence 975 789999999999988888887776653 554444333 33459999999997531 1 234999999999
Q ss_pred CCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCC-hHHHHHhhhhhhhhhhhhhhccccccccccccceEeeeHHHHH
Q 011596 322 FQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDEN-LLTRLQDINLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALE 400 (482)
Q Consensus 322 ~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~ 400 (482)
++++|++|+.+...+ ++.+++|.+....+...+ +.+.....++...+..........+...++.|+++++||++++
T Consensus 169 ~~v~Pd~Lr~~~~~~---~~~~~VQ~pv~~~~~~~~~~~ag~y~~ef~~~~~~~l~~r~~LG~~~~~~Gtg~afRR~aLe 245 (504)
T PRK14716 169 DVIHPLELRLYNYLL---PRHDFVQLPVFSLPRDWGEWVAGTYMDEFAESHLKDLPVREALGGLIPSAGVGTAFSRRALE 245 (504)
T ss_pred CCcCccHHHHHHhhc---CCCCEEecceeccCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCeeEEeEHHHHH
Confidence 999999999877665 345688877665544333 2232222233222222222223333455678999999999999
Q ss_pred Hc-----CC-CCCCCchhHHHHHHHHHHCCCcEEEecccee---------------cccCCcCHHHHHHHHHhhhhhh-H
Q 011596 401 DS-----GG-WMERTTVEDMDIAVRAHLRGWKFIFLNDVEC---------------QCELPESYEAYRKQQHRWHSGP-M 458 (482)
Q Consensus 401 ~i-----Gg-f~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~---------------~~~~p~t~~~~~~qr~RW~~G~-~ 458 (482)
++ |+ |++++++||+++++++..+||++.|+|++.+ .++.|+|++++.+||.||+.|. +
T Consensus 246 ~l~~~~GG~~fd~~sLTED~dLglRL~~~G~rv~y~p~ai~~~~~~~~~~~~~v~t~e~~P~t~~a~~rQR~RW~~Gi~~ 325 (504)
T PRK14716 246 RLAAERGGQPFDSDSLTEDYDIGLRLKRAGFRQIFVRVRADDTTDRPDRRGEPIATREFFPDTFKAAVRQKARWIYGIAF 325 (504)
T ss_pred HHHhhcCCCCCCCCCcchHHHHHHHHHHCCCEEEEecccccccccccccccccccccccCccCHHHHHHHHHHHHhchHH
Confidence 97 33 9999999999999999999999999999853 3678999999999999999995 7
Q ss_pred HHHHHh
Q 011596 459 QLFRLC 464 (482)
Q Consensus 459 q~~~~~ 464 (482)
|..++.
T Consensus 326 Q~~~~~ 331 (504)
T PRK14716 326 QGWERL 331 (504)
T ss_pred hhHHhc
Confidence 876543
|
|
| >PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-35 Score=277.03 Aligned_cols=228 Identities=27% Similarity=0.449 Sum_probs=157.8
Q ss_pred CeEEEEeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccH
Q 011596 221 PMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNL 300 (482)
Q Consensus 221 P~VsViIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~al 300 (482)
|+|+|+||+|||++.+.++|+|+++|+||+ ++|+|+||++++.+.+.+++..+.++..+++++...+..+.++|+.++
T Consensus 1 P~v~Vvip~~~~~~~l~~~l~sl~~~~~~~--~~v~vvd~~~~~~~~~~~~~~~~~~~~~~v~vi~~~~~~g~~~k~~a~ 78 (228)
T PF13641_consen 1 PRVSVVIPAYNEDDVLRRCLESLLAQDYPR--LEVVVVDDGSDDETAEILRALAARYPRVRVRVIRRPRNPGPGGKARAL 78 (228)
T ss_dssp --EEEE--BSS-HHHHHHHHHHHTTSHHHT--EEEEEEEE-SSS-GCTTHHHHHHTTGG-GEEEEE----HHHHHHHHHH
T ss_pred CEEEEEEEecCCHHHHHHHHHHHHcCCCCC--eEEEEEECCCChHHHHHHHHHHHHcCCCceEEeecCCCCCcchHHHHH
Confidence 679999999999999999999999999965 889999999998888888888887775455555332212223699999
Q ss_pred HHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHHHHhhhhhhhhhhhhhhccc
Q 011596 301 KSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQQVNGV 380 (482)
Q Consensus 301 n~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (482)
|.|++ ..++|+|+++|+|+.++|++|++++..| .+|++++|++.....+ +.++++.+....+.............
T Consensus 79 n~~~~---~~~~d~i~~lD~D~~~~p~~l~~~~~~~-~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (228)
T PF13641_consen 79 NEALA---AARGDYILFLDDDTVLDPDWLERLLAAF-ADPGVGAVGGPVFPDN-DRNWLTRLQDLFFARWHLRFRSGRRA 153 (228)
T ss_dssp HHHHH---H---SEEEEE-SSEEE-CHHHHHHHHHH-HBSS--EEEEEEEETT-CCCEEEE-TT--S-EETTTS-TT-B-
T ss_pred HHHHH---hcCCCEEEEECCCcEECHHHHHHHHHHH-HhCCCCeEeeeEeecC-CCCHHHHHHHHHHhhhhhhhhhhhcc
Confidence 99999 5789999999999999999999999999 4799999999886554 55665555444332222211222222
Q ss_pred cccccccccceEeeeHHHHHHcCCCCCCCchhHHHHHHHHHHCCCcEEEeccceecccCCcCHHHHHHHHHhhhhh
Q 011596 381 FINFFGFNGTAGVWRIKALEDSGGWMERTTVEDMDIAVRAHLRGWKFIFLNDVECQCELPESYEAYRKQQHRWHSG 456 (482)
Q Consensus 381 ~~~~~~~~G~~~~~Rr~~l~~iGgf~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~~~~~qr~RW~~G 456 (482)
. +..+++|+++++|+++++++|||++....||.+++.++.++||++.|+|++.++++.|.+++++.+||.||.+|
T Consensus 154 ~-~~~~~~G~~~~~rr~~~~~~g~fd~~~~~eD~~l~~r~~~~G~~~~~~~~~~v~~~~~~~~~~~~~q~~RW~~g 228 (228)
T PF13641_consen 154 L-GVAFLSGSGMLFRRSALEEVGGFDPFILGEDFDLCLRLRAAGWRIVYAPDALVYHEEPSSLKAFFKQRFRWSRG 228 (228)
T ss_dssp ----S-B--TEEEEEHHHHHHH-S--SSSSSHHHHHHHHHHHTT--EEEEEEEEEEE--SSSTHHHHHHHHHHH--
T ss_pred c-ceeeccCcEEEEEHHHHHHhCCCCCCCcccHHHHHHHHHHCCCcEEEECCcEEEEeCCCCHHHHHHHHhccCcC
Confidence 2 34456899999999999999999998788999999999999999999999999999999999999999999987
|
|
| >cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=257.39 Aligned_cols=193 Identities=22% Similarity=0.325 Sum_probs=166.1
Q ss_pred CeEEEEeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccH
Q 011596 221 PMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNL 300 (482)
Q Consensus 221 P~VsViIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~al 300 (482)
|+|||+||+|||++.+.++|+|+++|+||+ ++|+||||+++|.+.+++++....++...++++...+..+.++|+.++
T Consensus 1 p~vsviip~~n~~~~l~~~L~sl~~q~~~~--~eiivVdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 78 (196)
T cd02520 1 PGVSILKPLCGVDPNLYENLESFFQQDYPK--YEILFCVQDEDDPAIPVVRKLIAKYPNVDARLLIGGEKVGINPKVNNL 78 (196)
T ss_pred CCeEEEEecCCCCccHHHHHHHHHhccCCC--eEEEEEeCCCcchHHHHHHHHHHHCCCCcEEEEecCCcCCCCHhHHHH
Confidence 679999999999999999999999999987 789999999999998988887776553334333222211222577889
Q ss_pred HHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHHHHhhhhhhhhhhhhhhccc
Q 011596 301 KSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQQVNGV 380 (482)
Q Consensus 301 n~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (482)
|.|++ .+++||++++|+|+.++|++|++++..+. +|++++|++.
T Consensus 79 n~g~~---~a~~d~i~~~D~D~~~~~~~l~~l~~~~~-~~~~~~v~~~-------------------------------- 122 (196)
T cd02520 79 IKGYE---EARYDILVISDSDISVPPDYLRRMVAPLM-DPGVGLVTCL-------------------------------- 122 (196)
T ss_pred HHHHH---hCCCCEEEEECCCceEChhHHHHHHHHhh-CCCCCeEEee--------------------------------
Confidence 99999 68999999999999999999999999986 6889999876
Q ss_pred cccccccccceEeeeHHHHHHcCCCCCC--CchhHHHHHHHHHHCCCcEEEeccceecccCCcCHHHHHHHHHhhhhh
Q 011596 381 FINFFGFNGTAGVWRIKALEDSGGWMER--TTVEDMDIAVRAHLRGWKFIFLNDVECQCELPESYEAYRKQQHRWHSG 456 (482)
Q Consensus 381 ~~~~~~~~G~~~~~Rr~~l~~iGgf~~~--~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~~~~~qr~RW~~G 456 (482)
...|+++++|+++++++|||++. .+.||++++.++..+||++.+.|++.++++.|.+++++++||.||.+.
T Consensus 123 -----~~~g~~~~~r~~~~~~~ggf~~~~~~~~eD~~l~~rl~~~G~~i~~~~~~~~~~~~~~~~~~~~~q~~rw~~~ 195 (196)
T cd02520 123 -----CAFGKSMALRREVLDAIGGFEAFADYLAEDYFLGKLIWRLGYRVVLSPYVVMQPLGSTSLASFWRRQLRWSRT 195 (196)
T ss_pred -----cccCceeeeEHHHHHhccChHHHhHHHHHHHHHHHHHHHcCCeEEEcchheeccCCcccHHHHHHHHHHHhcc
Confidence 25789999999999999999753 457999999999999999999999999999999999999999999864
|
UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment. |
| >cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=265.97 Aligned_cols=205 Identities=21% Similarity=0.291 Sum_probs=172.9
Q ss_pred EEeecCCch-HHHHHHHHHHHhCCCC--------CCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCC
Q 011596 225 VQIPMCNEK-EVYQQSIAAVCNLDWP--------KSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGY 295 (482)
Q Consensus 225 ViIP~yne~-~~l~~tL~Sll~q~yp--------~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~ 295 (482)
|+||+|||+ .+|+++|+|+++|+|| .++++|+|+|||++| .+.|
T Consensus 1 v~ip~yNE~~~~i~~~l~sv~~q~y~~~~~~~~~~~~~evivv~Dgs~d--------------------------~~~g- 53 (244)
T cd04190 1 VCVTMYNEDEEELARTLDSILKNDYPFCARGGDSWKKIVVCVIFDGAIK--------------------------KNRG- 53 (244)
T ss_pred CEEeeecCCHHHHHHHHHHHHHhhHHHHhcCCCCccEEEEEEEeCCccc--------------------------ccCc-
Confidence 689999997 8999999999999999 678999999999888 1222
Q ss_pred ccc-------cHHHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHHHHhhhhh
Q 011596 296 KAG-------NLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLS 368 (482)
Q Consensus 296 Ka~-------aln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~~~~~~~~ 368 (482)
|+. ++|.++. .+++|||+++|+|+.++|++|++++..|..+|++++|++.....+...+++...+.+++.
T Consensus 54 k~~~~~~~~~~~~~~~~---~a~~e~i~~~DaD~~~~~~~l~~l~~~~~~~p~vg~v~g~~~~~~~~~~~~~~~q~~ey~ 130 (244)
T cd04190 54 KRDSQLWFFNYFCRVLF---PDDPEFILLVDADTKFDPDSIVQLYKAMDKDPEIGGVCGEIHPMGKKQGPLVMYQVFEYA 130 (244)
T ss_pred chHHHHHHHHHHHHHhh---cCCCCEEEEECCCCcCCHhHHHHHHHHHHhCCCEEEEEeeeEEcCCcchhHHHhHheehh
Confidence 443 3445554 579999999999999999999999999977899999999988888777888888888776
Q ss_pred hhhhhhhhhccccccccccccceEeeeHHHHHHcCCCCC--------------------CCchhHHHHHHHHHHCCCcEE
Q 011596 369 FHFEVEQQVNGVFINFFGFNGTAGVWRIKALEDSGGWME--------------------RTTVEDMDIAVRAHLRGWKFI 428 (482)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~iGgf~~--------------------~~~~ED~~l~~rl~~~G~ki~ 428 (482)
..........+..+...++.|+++++|++++++.|++.. ..++||.+++.++..+||++.
T Consensus 131 ~~~~~~~~~~s~~g~~~~~~G~~~~~R~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ED~~l~~~l~~~G~~~~ 210 (244)
T cd04190 131 ISHWLDKAFESVFGFVTCLPGCFSMYRIEALKGDNGGKGPLLDYAYLTNTVDSLHKKNNLDLGEDRILCTLLLKAGPKRK 210 (244)
T ss_pred hhhhhcccHHHcCCceEECCCceEEEEehhhcCCccccccchhhccccCcccchHHHHHHhHhcccceeHHHhccCCccE
Confidence 544433444455555667899999999999999876533 136899999999999999999
Q ss_pred E--eccceecccCCcCHHHHHHHHHhhhhhhHH
Q 011596 429 F--LNDVECQCELPESYEAYRKQQHRWHSGPMQ 459 (482)
Q Consensus 429 ~--~~~~~~~~~~p~t~~~~~~qr~RW~~G~~q 459 (482)
| .|++.++++.|+|++++++||.||.+|.+.
T Consensus 211 ~~~~~~a~~~~~~p~s~~~~~~QR~RW~~g~~~ 243 (244)
T cd04190 211 YLYVPGAVAETDVPETFVELLSQRRRWINSTIA 243 (244)
T ss_pred EEEecccEEEEECCCCHHHHHHHhHhhhccccc
Confidence 9 999999999999999999999999999763
|
Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified. |
| >PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.6e-30 Score=279.62 Aligned_cols=285 Identities=20% Similarity=0.189 Sum_probs=204.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---CCCCCCCCCCccccCCCCCCCeEEEEeecCCchHHHHHHHHHHH-h
Q 011596 170 LANACIVLFLIQSLDRLILCLGCFWIRFKRI---KPVPKHDDTSDLESGQKGFFPMVLVQIPMCNEKEVYQQSIAAVC-N 245 (482)
Q Consensus 170 ~~~~~~~lf~i~~~~~l~~~~~~~~~~~~r~---~~~~~~~~~~~~~~~~~~~~P~VsViIP~yne~~~l~~tL~Sll-~ 245 (482)
+..+..+++++..++-++.-..+|.....|. ++..+.... .. -.+.+.|+|+|+||+|||+.++.+++++++ +
T Consensus 12 ~~~~~~~~~~~~~~ddl~~d~~~~~~~~~~~~~~~~~~~~~~~-~~--l~~~~~~~vsIlVPa~nE~~vi~~~i~~ll~~ 88 (727)
T PRK11234 12 IAITLAVLMFISGLDDLFIDVVYWVRRIKRKLSVYRRYPRMSY-RE--LYKPDEKPLAIMVPAWNETGVIGNMAELAATT 88 (727)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhhhcccCCCCh-hh--cccCCCCCEEEEEecCcchhhHHHHHHHHHHh
Confidence 3444556666777777776555443222221 111111110 11 122367899999999999999999999987 7
Q ss_pred CCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHhhhcc------cCCceEEEEEc
Q 011596 246 LDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSY------VKDYEFVAIFD 319 (482)
Q Consensus 246 q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al~~~~------~a~~d~Vl~lD 319 (482)
++||+ ++|++++|.+|+.|.+.+++..++++ +++++...++. +++|++|+|.+++.+. ..++++++++|
T Consensus 89 ldYP~--~eI~vi~~~nD~~T~~~~~~l~~~~p--~~~~v~~~~~g-~~gKa~aLN~~l~~~~~~e~~~~~~~~vvvi~D 163 (727)
T PRK11234 89 LDYEN--YHIFVGTYPNDPATQADVDAVCARFP--NVHKVVCARPG-PTSKADCLNNVLDAITQFERSANFAFAGFILHD 163 (727)
T ss_pred CCCCC--eEEEEEecCCChhHHHHHHHHHHHCC--CcEEEEeCCCC-CCCHHHHHHHHHHHHHhhhcccCCcccEEEEEc
Confidence 99998 78999998889999999998888765 35555554543 4459999999998531 11457788999
Q ss_pred CCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCC-CChHHHHHhhhhhhhhhhhhhhccccccccccccceEee-eH-
Q 011596 320 ADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKD-ENLLTRLQDINLSFHFEVEQQVNGVFINFFGFNGTAGVW-RI- 396 (482)
Q Consensus 320 aD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~-Rr- 396 (482)
||++++||+|+ ++..+. ++. ++||++....+.. ..+.+..+..++...+..........+...++.|++++| |+
T Consensus 164 AD~~v~pd~L~-~~~~l~-~~~-~~VQ~p~~p~~~~~~~~~~~~~~~EFa~~~~~~~~~~~~lgg~~~l~G~~~af~Rr~ 240 (727)
T PRK11234 164 AEDVISPMELR-LFNYLV-ERK-DLIQIPVYPFEREWTHFTSGTYIDEFAELHGKDVPVREALAGQVPSAGVGTCFSRRA 240 (727)
T ss_pred CCCCCChhHHH-HHHhhc-CCC-CeEeecccCCCccHHHHHHHHHHHHHHHHhhhhhHHHHHcCCCcccCCceEEEeccc
Confidence 99999999998 667776 355 8999986543332 233455555666544433333333333445689999999 77
Q ss_pred -HHHHHcC---CCCCCCchhHHHHHHHHHHCCCcEEEecc-----------------------ceecccCCcCHHHHHHH
Q 011596 397 -KALEDSG---GWMERTTVEDMDIAVRAHLRGWKFIFLND-----------------------VECQCELPESYEAYRKQ 449 (482)
Q Consensus 397 -~~l~~iG---gf~~~~~~ED~~l~~rl~~~G~ki~~~~~-----------------------~~~~~~~p~t~~~~~~q 449 (482)
+++.+.| +|+.++++||++++++++.+||++.|.|. ..++++.|+|+++..+|
T Consensus 241 l~al~~~ggg~~~~~~~lTED~dlg~rL~~~G~~v~f~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~t~~~~~rQ 320 (727)
T PRK11234 241 VTALLEDGDGIAFDVQSLTEDYDIGFRLKEKGMREIFVRFPVVDEAKEREQRKFLQHARTSNMICVREYFPDTFSAAVRQ 320 (727)
T ss_pred HHHHHHhcCCCCcCCCcchHHHHHHHHHHHCCCEEEEcccccccccccccccccccccccccceEEEEeCchhHHHHHHH
Confidence 5688887 68999999999999999999999999991 33777889999999999
Q ss_pred HHhhhhh-hHHHHHHhC
Q 011596 450 QHRWHSG-PMQLFRLCL 465 (482)
Q Consensus 450 r~RW~~G-~~q~~~~~~ 465 (482)
|.||..| .+|.++...
T Consensus 321 R~RW~~G~~~q~~~~~~ 337 (727)
T PRK11234 321 KSRWIIGIVFQGFKTLG 337 (727)
T ss_pred HHHHHcccHHHHHHHhC
Confidence 9999999 688876655
|
|
| >cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-29 Score=240.22 Aligned_cols=223 Identities=20% Similarity=0.287 Sum_probs=170.2
Q ss_pred EEeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEecc-CCCCCccccHHHH
Q 011596 225 VQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRI-LRDGYKAGNLKSA 303 (482)
Q Consensus 225 ViIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~-~~~g~Ka~aln~a 303 (482)
|+||+||+++.+++||+|+++|+||++.++|+|+||+|+|.+.++++ .....+ +.++.+.... ..+.|++.++|.|
T Consensus 1 viip~~n~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~-~~~~~~--~~~v~~~~~~~~~~~g~~~a~n~g 77 (229)
T cd04192 1 VVIAARNEAENLPRLLQSLSALDYPKEKFEVILVDDHSTDGTVQILE-FAAAKP--NFQLKILNNSRVSISGKKNALTTA 77 (229)
T ss_pred CEEEecCcHHHHHHHHHHHHhCCCCCCceEEEEEcCCCCcChHHHHH-HHHhCC--CcceEEeeccCcccchhHHHHHHH
Confidence 68999999999999999999999998778999999999999988776 333322 3344443333 2344688999999
Q ss_pred hhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHHHHhhhhhhhhhhhhhhcccccc
Q 011596 304 MNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQQVNGVFIN 383 (482)
Q Consensus 304 l~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (482)
++ .+++|||+++|+|+.++|++|++++..+.+ ++.+++++..... ...++........+.............. .
T Consensus 78 ~~---~~~~d~i~~~D~D~~~~~~~l~~l~~~~~~-~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 151 (229)
T cd04192 78 IK---AAKGDWIVTTDADCVVPSNWLLTFVAFIQK-EQIGLVAGPVIYF-KGKSLLAKFQRLDWLSLLGLIAGSFGLG-K 151 (229)
T ss_pred HH---HhcCCEEEEECCCcccCHHHHHHHHHHhhc-CCCcEEeeeeeec-CCccHHHHHHHHHHHHHHHHHhhHHHhc-C
Confidence 99 588999999999999999999999998875 5666777776544 3345555544443322221111111111 2
Q ss_pred ccccccceEeeeHHHHHHcCCCCCC--CchhHHHHHHHHHHCCC-cEEEe--ccceecccCCcCHHHHHHHHHhhhhh
Q 011596 384 FFGFNGTAGVWRIKALEDSGGWMER--TTVEDMDIAVRAHLRGW-KFIFL--NDVECQCELPESYEAYRKQQHRWHSG 456 (482)
Q Consensus 384 ~~~~~G~~~~~Rr~~l~~iGgf~~~--~~~ED~~l~~rl~~~G~-ki~~~--~~~~~~~~~p~t~~~~~~qr~RW~~G 456 (482)
....+|+++++||++++++|||++. ...||.+++.++..+|+ ++.+. |.+.++++.|.++.++.+||.||+.|
T Consensus 152 ~~~~~g~~~~~rr~~~~~~ggf~~~~~~~~eD~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~Rw~~g 229 (229)
T cd04192 152 PFMCNGANMAYRKEAFFEVGGFEGNDHIASGDDELLLAKVASKYPKVAYLKNPEALVTTQPVTSWKELLNQRKRWASK 229 (229)
T ss_pred ccccccceEEEEHHHHHHhcCCccccccccCCHHHHHHHHHhCCCCEEEeeCcchheecCCchhHHHHHHHHHHhhcC
Confidence 2235799999999999999999864 55799999999999999 89887 45668889999999999999999986
|
GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families. |
| >cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-29 Score=243.23 Aligned_cols=223 Identities=20% Similarity=0.250 Sum_probs=172.9
Q ss_pred eEEEEeecCCch-HHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccH
Q 011596 222 MVLVQIPMCNEK-EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNL 300 (482)
Q Consensus 222 ~VsViIP~yne~-~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~al 300 (482)
.|||+||+|||+ +.+.+||+|+.+|+ | .+|+|+||+++|.+.+.+++... ...+. +. ..+ ++||+.++
T Consensus 1 ~isVvIp~~ne~~~~l~~~l~sl~~q~-~---~eiivvdd~s~d~~~~~l~~~~~---~~~~~--v~-~~~-~~g~~~a~ 69 (235)
T cd06434 1 DVTVIIPVYDEDPDVFRECLRSILRQK-P---LEIIVVTDGDDEPYLSILSQTVK---YGGIF--VI-TVP-HPGKRRAL 69 (235)
T ss_pred CeEEEEeecCCChHHHHHHHHHHHhCC-C---CEEEEEeCCCChHHHHHHHhhcc---CCcEE--EE-ecC-CCChHHHH
Confidence 489999999999 99999999999998 3 56889999999988776632211 22222 22 233 44599999
Q ss_pred HHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHHHHhhhhhhhhhhhhhhccc
Q 011596 301 KSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQQVNGV 380 (482)
Q Consensus 301 n~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (482)
|.|++ .+++|||+++|+|+.++|++|++++..+. +|+++++++.....+.+.+.+.......+.............
T Consensus 70 n~g~~---~a~~d~v~~lD~D~~~~~~~l~~l~~~~~-~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (235)
T cd06434 70 AEGIR---HVTTDIVVLLDSDTVWPPNALPEMLKPFE-DPKVGGVGTNQRILRPRDSKWSFLAAEYLERRNEEIRAAMSY 145 (235)
T ss_pred HHHHH---HhCCCEEEEECCCceeChhHHHHHHHhcc-CCCEeEEcCceEeecCcccHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999 57999999999999999999999999998 799999999887776654555444333222222222222233
Q ss_pred cccccccccceEeeeHHHHHHcCCCC----------CCCchhHHHHHHHHHHCCCcEEEeccceecccCCcCHHHHHHHH
Q 011596 381 FINFFGFNGTAGVWRIKALEDSGGWM----------ERTTVEDMDIAVRAHLRGWKFIFLNDVECQCELPESYEAYRKQQ 450 (482)
Q Consensus 381 ~~~~~~~~G~~~~~Rr~~l~~iGgf~----------~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~~~~~qr 450 (482)
.....+++|.++++||+++++.+... .....||.+++.++.++||++.|.+.+.++++.|.++.++++||
T Consensus 146 ~~~~~~~~G~~~~~rr~~l~~~~~~~~~~~~~~~~~~~~~~eD~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~q~ 225 (235)
T cd06434 146 DGGVPCLSGRTAAYRTEILKDFLFLEEFTNETFMGRRLNAGDDRFLTRYVLSHGYKTVYQYTSEAYTETPENYKKFLKQQ 225 (235)
T ss_pred CCCEEEccCcHHHHHHHHHhhhhhHHHhhhhhhcCCCCCcCchHHHHHHHHHCCCeEEEecCCeEEEEcchhHHHHHHHh
Confidence 33445578999999999999864321 12577999999999999999999999999999999999999999
Q ss_pred HhhhhhhHH
Q 011596 451 HRWHSGPMQ 459 (482)
Q Consensus 451 ~RW~~G~~q 459 (482)
.||.+|.++
T Consensus 226 ~Rw~~~~~~ 234 (235)
T cd06434 226 LRWSRSNWR 234 (235)
T ss_pred hhhhhcccC
Confidence 999998753
|
Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate. |
| >cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.5e-29 Score=239.12 Aligned_cols=224 Identities=21% Similarity=0.307 Sum_probs=177.2
Q ss_pred CCCeEEEEeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccc
Q 011596 219 FFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAG 298 (482)
Q Consensus 219 ~~P~VsViIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~ 298 (482)
..|+++|+||+|||++.+.++|+|+.+|+||+++++|+|+||+++|.+.++++++.+ .++.+ ....++ .||++
T Consensus 27 ~~~~isVvip~~n~~~~l~~~l~si~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~----~~v~~--i~~~~~-~g~~~ 99 (251)
T cd06439 27 YLPTVTIIIPAYNEEAVIEAKLENLLALDYPRDRLEIIVVSDGSTDGTAEIAREYAD----KGVKL--LRFPER-RGKAA 99 (251)
T ss_pred CCCEEEEEEecCCcHHHHHHHHHHHHhCcCCCCcEEEEEEECCCCccHHHHHHHHhh----CcEEE--EEcCCC-CChHH
Confidence 578999999999999999999999999999987789999999999999888876543 13433 333444 45999
Q ss_pred cHHHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHHHHhhhhhhhhhhhhhhc
Q 011596 299 NLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQQVN 378 (482)
Q Consensus 299 aln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (482)
++|.|++ .+++|||+++|+|+.++|+++++++..+. +++++++++.....+.+. ........+... .......
T Consensus 100 a~n~gi~---~a~~d~i~~lD~D~~~~~~~l~~l~~~~~-~~~~~~v~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~ 172 (251)
T cd06439 100 ALNRALA---LATGEIVVFTDANALLDPDALRLLVRHFA-DPSVGAVSGELVIVDGGG--SGSGEGLYWKYE-NWLKRAE 172 (251)
T ss_pred HHHHHHH---HcCCCEEEEEccccCcCHHHHHHHHHHhc-CCCccEEEeEEEecCCcc--cchhHHHHHHHH-HHHHHHH
Confidence 9999999 57889999999999999999999999997 588999999877665532 110001100000 1111111
Q ss_pred cccccccccccceEeeeHHHHHHcCCCCCCCchhHHHHHHHHHHCCCcEEEeccceecccCCcCHHHHHHHHHhhhhhhH
Q 011596 379 GVFINFFGFNGTAGVWRIKALEDSGGWMERTTVEDMDIAVRAHLRGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPM 458 (482)
Q Consensus 379 ~~~~~~~~~~G~~~~~Rr~~l~~iGgf~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~~~~~qr~RW~~G~~ 458 (482)
..........|+++++||++++ +|......||.+++.++..+|+++.+.|++.+++..|.++.++.+|+.||..|.+
T Consensus 173 ~~~~~~~~~~g~~~~~rr~~~~---~~~~~~~~eD~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~g~~ 249 (251)
T cd06439 173 SRLGSTVGANGAIYAIRRELFR---PLPADTINDDFVLPLRIARQGYRVVYEPDAVAYEEVAEDGSEEFRRRVRIAAGNL 249 (251)
T ss_pred HhcCCeeeecchHHHhHHHHhc---CCCcccchhHHHHHHHHHHcCCeEEeccccEEEEeCcccHHHHHHHHHHHHhccc
Confidence 2222344467888899999998 6667678899999999999999999999999999999999999999999999988
Q ss_pred H
Q 011596 459 Q 459 (482)
Q Consensus 459 q 459 (482)
|
T Consensus 250 ~ 250 (251)
T cd06439 250 Q 250 (251)
T ss_pred c
Confidence 7
|
This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. |
| >PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-27 Score=255.36 Aligned_cols=288 Identities=17% Similarity=0.124 Sum_probs=201.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC-CCCCCCccccCCCCCCCeEEEEeecCCchHHHHHHHHHHH-hC
Q 011596 169 FLANACIVLFLIQSLDRLILCLGCFWIRFKRIKPVP-KHDDTSDLESGQKGFFPMVLVQIPMCNEKEVYQQSIAAVC-NL 246 (482)
Q Consensus 169 ~~~~~~~~lf~i~~~~~l~~~~~~~~~~~~r~~~~~-~~~~~~~~~~~~~~~~P~VsViIP~yne~~~l~~tL~Sll-~q 246 (482)
.+..+..+++++..++-+++-..+|.....|..... +..+. ...+-.+.+.|++||+||+|||++++.+++++++ ++
T Consensus 19 ~~~~~~~~~~~i~~~ddl~~d~~yw~r~~~r~~~~~~~~~~~-~~~~l~~~~~~~vsIlVPa~nE~~VI~~~v~~ll~~l 97 (703)
T PRK15489 19 TAAVATALVILISSLDDLFIDAWYWVRELYRWLTRERRYRPL-TAEQLRERDEQPLAIMVPAWKEYDVIAKMIENMLATL 97 (703)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhccccCCCC-ChHHhcccCCCceEEEEeCCCcHHHHHHHHHHHHhcC
Confidence 344555667777888888877665544333321111 11111 1111122367899999999999999999999986 78
Q ss_pred CCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHhhhcc----cCCc--eEEEEEcC
Q 011596 247 DWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSY----VKDY--EFVAIFDA 320 (482)
Q Consensus 247 ~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al~~~~----~a~~--d~Vl~lDa 320 (482)
+||+ ++|+|+.+.+|.+|.+.+++....+| .++++..++..++ +|+.|+|.+++.+. ..++ +.|++.||
T Consensus 98 dYp~--~~I~v~~~~nD~~T~~~~~~~~~~~p--~~~~v~~~~~gp~-gKa~ALN~~l~~~~~~e~~~~~~fa~vvi~DA 172 (703)
T PRK15489 98 DYRR--YVIFVGTYPNDAETITEVERMRRRYK--RLVRVEVPHDGPT-CKADCLNWIIQAIFRYEAGHGIEFAGVILHDS 172 (703)
T ss_pred CCCC--eEEEEEecCCCccHHHHHHHHhccCC--cEEEEEcCCCCCC-CHHHHHHHHHHHHHhhhhhccCccceEEEEcC
Confidence 9997 56777543344455566666655443 4555544333334 59999999998530 1133 44999999
Q ss_pred CCCCChHHHHHHHHHhhcCCCeEEEeeeee-eecCCCChHHHHHhhhhhhhhhhhhhhccccccccccccceEeeeHHHH
Q 011596 321 DFQPNPDFLRRTVPHFKDNEELGLVQARWS-FVNKDENLLTRLQDINLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKAL 399 (482)
Q Consensus 321 D~~~~pd~L~~lv~~f~~~p~v~~V~~~~~-~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l 399 (482)
|++++|+.|+.+ .++..++ +++|++.. ..+...++.++.+..+|+..+..............+..|++++|||+++
T Consensus 173 Ed~~~P~~L~~~-~~~~~~~--~~iQ~pV~~~~~~~~~~l~~~~~~Efa~~~~~~l~~r~~l~~~ipl~Gv~~~frr~aL 249 (703)
T PRK15489 173 EDVLHPLELKYF-NYLLPRK--DLVQLPVLSLERKWYEWVAGTYMDEFAEWHQKDLVVRESLTGTVPSAGVGTCFSRRAL 249 (703)
T ss_pred CCCCChhHHHHH-HhhcCCc--ceeeeeeccCCCccccHHHHHHHHHHHHHhhhHHHHHHHcCCceeccCcceeeeHHHH
Confidence 999999999877 5554334 57887643 4455578999999999887766555444444445578999999999998
Q ss_pred HHc---CC---CCCCCchhHHHHHHHHHHCCCcEEEec-----------------------cceecccCCcCHHHHHHHH
Q 011596 400 EDS---GG---WMERTTVEDMDIAVRAHLRGWKFIFLN-----------------------DVECQCELPESYEAYRKQQ 450 (482)
Q Consensus 400 ~~i---Gg---f~~~~~~ED~~l~~rl~~~G~ki~~~~-----------------------~~~~~~~~p~t~~~~~~qr 450 (482)
+++ || |+.++++||+|+++|++++||+..|+- ...+.++.|.|+.+..+||
T Consensus 250 ~~l~~~gg~~~~n~~sLTED~Dlg~RL~~~G~r~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~tre~fP~~~~a~~rQk 329 (703)
T PRK15489 250 LALMKERGNQPFNTSSLTEDYDFSFRLAELGMQEIFVRFPVQFRVRRTSWFGPRRERTREMLLCVREYFPDTFRTAYRQK 329 (703)
T ss_pred HHHHHhcCCCCCCCCCchHhHHHHHHHHHCCCceEEEEEeccccccccccccccccccccCceeehhhCcHHHHHHHHHH
Confidence 876 54 666788999999999999999999921 1336778899999999999
Q ss_pred HhhhhhhH-HHHHHhC
Q 011596 451 HRWHSGPM-QLFRLCL 465 (482)
Q Consensus 451 ~RW~~G~~-q~~~~~~ 465 (482)
.||..|-. |.++...
T Consensus 330 ~RW~~Gi~~q~~~~~g 345 (703)
T PRK15489 330 ARWVLGIAFQGWEQMG 345 (703)
T ss_pred HHHHhHHHHhhHHHhC
Confidence 99999977 8765544
|
|
| >PLN02893 Cellulose synthase-like protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.1e-27 Score=249.38 Aligned_cols=277 Identities=21% Similarity=0.278 Sum_probs=200.1
Q ss_pred HHhhcCCCCCCCCCCcccc--CCCCCCCeEEEEeec---CCch-HHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHH
Q 011596 196 RFKRIKPVPKHDDTSDLES--GQKGFFPMVLVQIPM---CNEK-EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTL 269 (482)
Q Consensus 196 ~~~r~~~~~~~~~~~~~~~--~~~~~~P~VsViIP~---yne~-~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~ 269 (482)
...|..|..+... ++... ..++++|.|+|.|++ ++|+ -...+|+-|+++.|||.+++-++|.|||...-|-+.
T Consensus 75 q~~k~~Pv~r~~~-~~~L~~~~~~~~lP~vDvfv~TaDP~~Epp~~~~ntvLSilA~dyp~~kls~YvSDDGgs~lt~~a 153 (734)
T PLN02893 75 QAFRMCPVHRRVF-IEHLEHYAKESDYPGLDVFICTADPYKEPPMGVVNTALSVMAYDYPTEKLSVYVSDDGGSKLTLFA 153 (734)
T ss_pred cCccccccccccC-HHHHhhhcccccCCcceeeeccCCcccCchHHHHHHHHHHHhhccCccceEEEEecCCccHHHHHH
Confidence 3355666555432 22221 112479999999999 6676 688899999999999999999999999866555443
Q ss_pred HHHH----------------------------------------------------H-------HHh-------------
Q 011596 270 IKEE----------------------------------------------------V-------LKW------------- 277 (482)
Q Consensus 270 ~~~~----------------------------------------------------~-------~~~------------- 277 (482)
+.|. . +++
T Consensus 154 l~Eaa~FA~~WvPFCrk~~ie~R~P~~YF~~~~~~~~~e~~~~k~~Yee~k~ri~~~~~~~~~~~~~~~~~~~~~~f~~w 233 (734)
T PLN02893 154 FMEAAKFATHWLPFCKKNKIVERCPEAYFSSNSHSWSPETEQIKMMYESMKVRVENVVERGKVSTDYITCDQEREAFSRW 233 (734)
T ss_pred HHHHHHHHHhhcccccccCCCcCCHHHHhccCCCccchHHHHHHHHHHHHHHHHHHHHhcCcCchhhhhhcccccccccC
Confidence 3322 0 110
Q ss_pred hh--------------------------CCCeEEEEeccCC----CCCccccHHHHhhhc-ccCCceEEEEEcCCCCC-C
Q 011596 278 QE--------------------------AGANIVYRHRILR----DGYKAGNLKSAMNCS-YVKDYEFVAIFDADFQP-N 325 (482)
Q Consensus 278 ~~--------------------------~~v~vv~~~~~~~----~g~Ka~aln~al~~~-~~a~~d~Vl~lDaD~~~-~ 325 (482)
.+ .-.+++|..|+++ ++.||||||.+++.+ ...+++||+++|+|+.+ +
T Consensus 234 ~~~~~~~dH~~ivqV~l~~~~~~d~~g~~lP~lvYvsReKrp~~~Hh~KAGaLN~llrvS~~~TngpfIl~lDcD~y~n~ 313 (734)
T PLN02893 234 TDKFTRQDHPTVIQVLLESGKDKDITGHTMPNLIYVSREKSKNSPHHFKAGALNTLLRVSATMTNAPIILTLDCDMYSND 313 (734)
T ss_pred cCCCCCCCCCceeeeeccCCCccchhhccCCceEEEeCCCCCCCCcccccchHHHHHHhhcccCCCCEEEEecCCcCCCc
Confidence 00 0124677777776 468999999999953 23789999999999996 7
Q ss_pred hHHHHHHHHHhhc---CCCeEEEeeeeeeecCCCCh-HHHHHhhhhhhhhhhhh-hhccccccccccccceEeeeHHHHH
Q 011596 326 PDFLRRTVPHFKD---NEELGLVQARWSFVNKDENL-LTRLQDINLSFHFEVEQ-QVNGVFINFFGFNGTAGVWRIKALE 400 (482)
Q Consensus 326 pd~L~~lv~~f~~---~p~v~~V~~~~~~~n~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~G~~~~~Rr~~l~ 400 (482)
|+++++.+.+|.+ +++++.||.++.+.|.+.+- +..-... .+...+ ..++..+. .++|+++++||+++.
T Consensus 314 p~~l~~amcff~Dp~~~~~vafVQfPQ~F~~i~~~D~y~~~~~v----ff~~~~~glDG~~gp--~y~GTGc~~RR~al~ 387 (734)
T PLN02893 314 PQTPLRALCYLLDPSMDPKLGYVQFPQIFHGINKNDIYAGELKR----LFQINMIGMDGLAGP--NYVGTGCFFRRRVFY 387 (734)
T ss_pred hhHHHHHHHHhcCCCcCCceEEEeCcccccCCCcCCCCcchhHH----HHHHHhhcccccCCc--eeeccceEEEHHHhc
Confidence 8999999999973 23799999999998766541 1111111 122222 33333332 378999999999993
Q ss_pred H------------------------------------------------cCCCCCCCchhHHHHHHHHHHCCCcEEEecc
Q 011596 401 D------------------------------------------------SGGWMERTTVEDMDIAVRAHLRGWKFIFLND 432 (482)
Q Consensus 401 ~------------------------------------------------iGgf~~~~~~ED~~l~~rl~~~G~ki~~~~~ 432 (482)
. .+||..++++||..++++++.+||+.+|++.
T Consensus 388 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~sC~ye~~t~WG~~~G~~ygsvtED~~Tg~~lh~~GWrSvY~~p 467 (734)
T PLN02893 388 GGPSSLILPEIPELNPDHLVDKSIKSQEVLALAHHVAGCNYENQTNWGSKMGFRYGSLVEDYYTGYRLQCEGWKSIFCNP 467 (734)
T ss_pred CCCccccchhhhhcccccccccccchHHHHHHhhhccccccccCCccccccceEeccccccHHHHHHHHhcCCcEEecCC
Confidence 0 1367777889999999999999999999863
Q ss_pred --ceecccCCcCHHHHHHHHHhhhhhhHHHHHHhChhhh-h-cCcchhhcc
Q 011596 433 --VECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDII-R-AKVYILSNT 479 (482)
Q Consensus 433 --~~~~~~~p~t~~~~~~qr~RW~~G~~q~~~~~~~~i~-~-s~~~~~~k~ 479 (482)
....+..|+++.+++.||.||+.|.+|++......++ . .++.+.+|+
T Consensus 468 ~~~af~G~aP~~l~~~l~Q~~RWa~G~lqI~~s~~nPl~~g~~~L~~~Qrl 518 (734)
T PLN02893 468 KRPAFLGDSPINLHDVLNQQKRWSVGLLEVAFSKYSPITFGVKSIGLLMGL 518 (734)
T ss_pred CchhhccCCCCCHHHHHHHHHHHHhhhHHHHhhccCchhhcccCCCHHHHH
Confidence 3468999999999999999999999999877555554 2 578887775
|
|
| >TIGR03469 HonB hopene-associated glycosyltransferase HpnB | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.6e-27 Score=242.57 Aligned_cols=230 Identities=18% Similarity=0.207 Sum_probs=168.1
Q ss_pred CCCeEEEEeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhC-CCeEEEEe-ccCCCCCc
Q 011596 219 FFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEA-GANIVYRH-RILRDGYK 296 (482)
Q Consensus 219 ~~P~VsViIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~-~v~vv~~~-~~~~~g~K 296 (482)
..|+|||+||+|||++.+.+||+|+++|+||+ ++||+|+||+|+|.|.+++++..++++.. +++++... .+.+.+||
T Consensus 38 ~~p~VSVIIpa~Ne~~~L~~~L~sL~~q~yp~-~~eIIVVDd~StD~T~~i~~~~~~~~~~~~~i~vi~~~~~~~g~~Gk 116 (384)
T TIGR03469 38 AWPAVVAVVPARNEADVIGECVTSLLEQDYPG-KLHVILVDDHSTDGTADIARAAARAYGRGDRLTVVSGQPLPPGWSGK 116 (384)
T ss_pred CCCCEEEEEecCCcHhHHHHHHHHHHhCCCCC-ceEEEEEeCCCCCcHHHHHHHHHHhcCCCCcEEEecCCCCCCCCcch
Confidence 57899999999999999999999999999995 48899999999999999998877655422 34443211 12233468
Q ss_pred cccHHHHhhhcccCC-----ceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHHHHhhhhhh--
Q 011596 297 AGNLKSAMNCSYVKD-----YEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSF-- 369 (482)
Q Consensus 297 a~aln~al~~~~~a~-----~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~~~~~~~~~-- 369 (482)
..++|.|++. ++ +||++++|+|+.++|+++++++..+++ ++++++++...... .++..+.....+..
T Consensus 117 ~~A~n~g~~~---A~~~~~~gd~llflDaD~~~~p~~l~~lv~~~~~-~~~~~vs~~~~~~~--~~~~~~~~~~~~~~~~ 190 (384)
T TIGR03469 117 LWAVSQGIAA---ARTLAPPADYLLLTDADIAHGPDNLARLVARARA-EGLDLVSLMVRLRC--ESFWEKLLIPAFVFFF 190 (384)
T ss_pred HHHHHHHHHH---HhccCCCCCEEEEECCCCCCChhHHHHHHHHHHh-CCCCEEEecccccC--CCHHHHHHHHHHHHHH
Confidence 8999999994 55 999999999999999999999999985 56677776554332 23333221111100
Q ss_pred --hhhhhhhhccccccccccccceEeeeHHHHHHcCCCCC--CCchhHHHHHHHHHHCCCcEEEeccceec-ccCCcCHH
Q 011596 370 --HFEVEQQVNGVFINFFGFNGTAGVWRIKALEDSGGWME--RTTVEDMDIAVRAHLRGWKFIFLNDVECQ-CELPESYE 444 (482)
Q Consensus 370 --~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~iGgf~~--~~~~ED~~l~~rl~~~G~ki~~~~~~~~~-~~~p~t~~ 444 (482)
.+... .............|+++++||++++++|||++ ..+.||.+++.++.++|+++.+....... ...-+++.
T Consensus 191 ~~~~~~~-~~~~~~~~~~~~~G~~~lirr~~~~~vGGf~~~~~~~~ED~~L~~r~~~~G~~v~~~~~~~~~s~r~~~~~~ 269 (384)
T TIGR03469 191 QKLYPFR-WVNDPRRRTAAAAGGCILIRREALERIGGIAAIRGALIDDCTLAAAVKRSGGRIWLGLAARTRSLRPYDGLG 269 (384)
T ss_pred HHhcchh-hhcCCCccceeecceEEEEEHHHHHHcCCHHHHhhCcccHHHHHHHHHHcCCcEEEEecCceEEEEecCCHH
Confidence 01111 01111112333579999999999999999976 36789999999999999999997665543 34556888
Q ss_pred HHHHHHHhhhhh
Q 011596 445 AYRKQQHRWHSG 456 (482)
Q Consensus 445 ~~~~qr~RW~~G 456 (482)
+..+|+.||...
T Consensus 270 ~~~~~~~r~~~~ 281 (384)
T TIGR03469 270 EIWRMIARTAYT 281 (384)
T ss_pred HHHHHHHHhHHH
Confidence 899999888653
|
This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms. |
| >cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.7e-27 Score=225.50 Aligned_cols=234 Identities=17% Similarity=0.216 Sum_probs=177.6
Q ss_pred eEEEEeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHH
Q 011596 222 MVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLK 301 (482)
Q Consensus 222 ~VsViIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln 301 (482)
+++|+||+||+++.+.++|.|+.+|+||...++|+|+||+++|.+.+.+++..++ ...+.+... ++. +++.++|
T Consensus 1 ~~sIiip~~n~~~~l~~~l~sl~~q~~~~~~~evivvd~~s~d~~~~~~~~~~~~----~~~v~~i~~-~~~-~~~~a~N 74 (249)
T cd02525 1 FVSIIIPVRNEEKYIEELLESLLNQSYPKDLIEIIVVDGGSTDGTREIVQEYAAK----DPRIRLIDN-PKR-IQSAGLN 74 (249)
T ss_pred CEEEEEEcCCchhhHHHHHHHHHhccCCCCccEEEEEeCCCCccHHHHHHHHHhc----CCeEEEEeC-CCC-CchHHHH
Confidence 4899999999999999999999999998567889999999999998888876553 223444433 333 4888999
Q ss_pred HHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHHHHhhhhhhhhhhh-hhhc-c
Q 011596 302 SAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVE-QQVN-G 379 (482)
Q Consensus 302 ~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~-~~~~-~ 379 (482)
.|++ .+++||++++|+|+.++|++|++++..+.+ ++.+++++.....+.. . ............+... .... .
T Consensus 75 ~g~~---~a~~d~v~~lD~D~~~~~~~l~~~~~~~~~-~~~~~v~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~ 148 (249)
T cd02525 75 IGIR---NSRGDIIIRVDAHAVYPKDYILELVEALKR-TGADNVGGPMETIGES-K-FQKAIAVAQSSPLGSGGSAYRGG 148 (249)
T ss_pred HHHH---HhCCCEEEEECCCccCCHHHHHHHHHHHhc-CCCCEEecceecCCCC-h-HHHHHHHHhhchhccCCcccccc
Confidence 9999 579999999999999999999999998874 6777777765433322 1 1111110000000000 0000 0
Q ss_pred ccccccccccceEeeeHHHHHHcCCCCCC-CchhHHHHHHHHHHCCCcEEEeccceecccCCcCHHHHHHHHHhhhhhhH
Q 011596 380 VFINFFGFNGTAGVWRIKALEDSGGWMER-TTVEDMDIAVRAHLRGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPM 458 (482)
Q Consensus 380 ~~~~~~~~~G~~~~~Rr~~l~~iGgf~~~-~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~~~~~qr~RW~~G~~ 458 (482)
.........|+++++|+++++++|+|++. ...||.+++.++.++|+++.++|++.+++..+.+++++.+|+.||..|.+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~eD~~l~~r~~~~G~~~~~~~~~~~~~~~~~s~~~~~~~~~r~~~~~~ 228 (249)
T cd02525 149 AVKIGYVDTVHHGAYRREVFEKVGGFDESLVRNEDAELNYRLRKAGYKIWLSPDIRVYYYPRSTLKKLARQYFRYGKWRA 228 (249)
T ss_pred ccccccccccccceEEHHHHHHhCCCCcccCccchhHHHHHHHHcCcEEEEcCCeEEEEcCCCCHHHHHHHHHHHhhhhH
Confidence 00002235788899999999999999876 44699999999999999999999999999999999999999999999999
Q ss_pred HHHHHhChh
Q 011596 459 QLFRLCLPD 467 (482)
Q Consensus 459 q~~~~~~~~ 467 (482)
+..+++...
T Consensus 229 ~~~~~~~~~ 237 (249)
T cd02525 229 RTLRKHRKS 237 (249)
T ss_pred HHHHhCcCc
Confidence 998875543
|
Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus. |
| >cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-25 Score=223.26 Aligned_cols=239 Identities=15% Similarity=0.164 Sum_probs=162.0
Q ss_pred EEEeecCCch-HHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHH
Q 011596 224 LVQIPMCNEK-EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKS 302 (482)
Q Consensus 224 sViIP~yne~-~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~ 302 (482)
|||||+||++ +.+.+||+|+.+|+++....|||||||+|+|.+.+.+.+....-...++++ +..+.+ .|.+.+.|.
T Consensus 1 SIIIp~~N~~~~~l~~~l~Sl~~~~~~~~~~EIIvVDd~S~d~t~~~~~~~~~~~~~~~v~v--i~~~~n-~G~~~a~N~ 77 (299)
T cd02510 1 SVIIIFHNEALSTLLRTVHSVINRTPPELLKEIILVDDFSDKPELKLLLEEYYKKYLPKVKV--LRLKKR-EGLIRARIA 77 (299)
T ss_pred CEEEEEecCcHHHHHHHHHHHHhcCchhcCCEEEEEECCCCchHHHHHHHHHHhhcCCcEEE--EEcCCC-CCHHHHHHH
Confidence 6999999999 999999999999998865568999999999988877755222111223444 333444 458999999
Q ss_pred HhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHHH----H-hhhhhhhhh---h-
Q 011596 303 AMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRL----Q-DINLSFHFE---V- 373 (482)
Q Consensus 303 al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~~----~-~~~~~~~~~---~- 373 (482)
|++ .+++|||+++|+|+.++|+||++++..+..+|.. ++++.....+.+....... . ...+..... .
T Consensus 78 g~~---~A~gd~i~fLD~D~~~~~~wL~~ll~~l~~~~~~-~v~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (299)
T cd02510 78 GAR---AATGDVLVFLDSHCEVNVGWLEPLLARIAENRKT-VVCPIIDVIDADTFEYRGSSGDARGGFDWSLHFKWLPLP 153 (299)
T ss_pred HHH---HccCCEEEEEeCCcccCccHHHHHHHHHHhCCCe-EEEeeeccccCCCeeEecCCCceeEEecccceeccccCC
Confidence 999 6899999999999999999999999999876654 4544332221110000000 0 000000000 0
Q ss_pred -h---hhhccccccccccccceEeeeHHHHHHcCCCCCCCc---hhHHHHHHHHHHCCCcEEEeccceecccCC-cC---
Q 011596 374 -E---QQVNGVFINFFGFNGTAGVWRIKALEDSGGWMERTT---VEDMDIAVRAHLRGWKFIFLNDVECQCELP-ES--- 442 (482)
Q Consensus 374 -~---~~~~~~~~~~~~~~G~~~~~Rr~~l~~iGgf~~~~~---~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p-~t--- 442 (482)
. ............++|+++++||++++++|||++... .||.|+++|+.++|+++.++|++.+.+... .+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~vGgfDe~~~~~~~ED~Dl~~R~~~~G~~i~~~p~a~v~H~~~~~~~~~ 233 (299)
T cd02510 154 EEERRRESPTAPIRSPTMAGGLFAIDREWFLELGGYDEGMDIWGGENLELSFKVWQCGGSIEIVPCSRVGHIFRRKRKPY 233 (299)
T ss_pred HHHhhhcCCCCCccCccccceeeEEEHHHHHHhCCCCCcccccCchhHHHHHHHHHcCCeEEEeeccEEEEeccccCCCC
Confidence 0 000111122334689999999999999999998743 499999999999999999999999776333 11
Q ss_pred ---------HHHHHHHHHhhhhhhHHHHHHhChhhh
Q 011596 443 ---------YEAYRKQQHRWHSGPMQLFRLCLPDII 469 (482)
Q Consensus 443 ---------~~~~~~qr~RW~~G~~q~~~~~~~~i~ 469 (482)
.+...+...+|..-....+.++.+.+.
T Consensus 234 ~~~~~~~~~~~n~~r~~~~w~~~~~~~~~~~~~~~~ 269 (299)
T cd02510 234 TFPGGSGTVLRNYKRVAEVWMDEYKEYFYKARPELR 269 (299)
T ss_pred CCCCcccHHHHHHHHHHHHHHHHHHHHHHhcCcccc
Confidence 123345556677666666666655554
|
UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins. |
| >cd06438 EpsO_like EpsO protein participates in the methanolan synthesis | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.4e-25 Score=205.30 Aligned_cols=181 Identities=22% Similarity=0.286 Sum_probs=142.5
Q ss_pred EEeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHh
Q 011596 225 VQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAM 304 (482)
Q Consensus 225 ViIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al 304 (482)
|+||+|||++.|.++|+++.+|+||...++|+|+||+|+|.|.+++++ .+..++.+ ....+++|+.++|.|+
T Consensus 1 VvIp~~ne~~~i~~~l~sl~~~~~p~~~~eiivvdd~s~D~t~~~~~~-------~~~~~~~~-~~~~~~gk~~aln~g~ 72 (183)
T cd06438 1 ILIPAHNEEAVIGNTVRSLKAQDYPRELYRIFVVADNCTDDTAQVARA-------AGATVLER-HDPERRGKGYALDFGF 72 (183)
T ss_pred CEEeccchHHHHHHHHHHHHhcCCCCcccEEEEEeCCCCchHHHHHHH-------cCCeEEEe-CCCCCCCHHHHHHHHH
Confidence 689999999999999999999999877789999999999999887763 33444433 2334456999999999
Q ss_pred hhcc--cCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHHHHhhhhhhhhhhhhhhccccc
Q 011596 305 NCSY--VKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQQVNGVFI 382 (482)
Q Consensus 305 ~~~~--~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (482)
+.+. .+++|+|+++|+|++++|+++.+++..+.++ .++|++.....+.+.+++.+.....+...............
T Consensus 73 ~~a~~~~~~~d~v~~~DaD~~~~p~~l~~l~~~~~~~--~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (183)
T cd06438 73 RHLLNLADDPDAVVVFDADNLVDPNALEELNARFAAG--ARVVQAYYNSKNPDDSWITRLYAFAFLVFNRLRPLGRSNLG 150 (183)
T ss_pred HHHHhcCCCCCEEEEEcCCCCCChhHHHHHHHHHhhC--CCeeEEEEeeeCCccCHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 8642 3469999999999999999999999999754 46788887776666688877776665544444443333344
Q ss_pred cccccccceEeeeHHHHHHcCCCCCCCchhHHHH
Q 011596 383 NFFGFNGTAGVWRIKALEDSGGWMERTTVEDMDI 416 (482)
Q Consensus 383 ~~~~~~G~~~~~Rr~~l~~iGgf~~~~~~ED~~l 416 (482)
....+.|+++++||+++++ |||.+..+.||+++
T Consensus 151 ~~~~~~G~~~~~rr~~l~~-~g~~~~~l~ED~~~ 183 (183)
T cd06438 151 LSCQLGGTGMCFPWAVLRQ-APWAAHSLTEDLEF 183 (183)
T ss_pred CCeeecCchhhhHHHHHHh-CCCCCCCcccccCC
Confidence 4455789999999999999 89999899999874
|
The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier. |
| >PLN02189 cellulose synthase | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.4e-24 Score=231.61 Aligned_cols=256 Identities=22% Similarity=0.318 Sum_probs=188.6
Q ss_pred CCCeEEEEeecCCch----HHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHH---------------------
Q 011596 219 FFPMVLVQIPMCNEK----EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEE--------------------- 273 (482)
Q Consensus 219 ~~P~VsViIP~yne~----~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~--------------------- 273 (482)
++|.|+|+|+|-+.. -...+|+-|+++.|||.+++-++|.|||...-|-+.+.|.
T Consensus 329 ~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FA~~WvPFCkK~~IepRaP 408 (1040)
T PLN02189 329 MLSPVDIFVSTVDPLKEPPLVTANTVLSILAMDYPVDKISCYVSDDGASMLTFEALSETAEFARKWVPFCKKFSIEPRAP 408 (1040)
T ss_pred cCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceeEEEecCCchHHHHHHHHHHHHHHHhhcccccccCCCcCCH
Confidence 599999999997654 5888999999999999999999999998655554433321
Q ss_pred ------------------------------------HH-------Hhhh-------------------------------
Q 011596 274 ------------------------------------VL-------KWQE------------------------------- 279 (482)
Q Consensus 274 ------------------------------------~~-------~~~~------------------------------- 279 (482)
++ +.++
T Consensus 409 e~YFs~~~~~~~~~~~~~F~~e~~~~K~eYEe~kvRI~~l~a~~~~~p~~~~~m~dGt~W~g~~~~dHp~IiQVll~~~~ 488 (1040)
T PLN02189 409 EFYFSLKVDYLKDKVQPTFVKERRAMKREYEEFKVRINAIVAKAQKVPPEGWIMQDGTPWPGNNTRDHPGMIQVFLGHSG 488 (1040)
T ss_pred HHHhccCCCcccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCccCCccceeccCccCCCCCCCCCHHHHHHHhcCCC
Confidence 00 0000
Q ss_pred ----CC---CeEEEEeccCCCC----CccccHHHHhhhc-ccCCceEEEEEcCCCCCC-hHHHHHHHHHhhcCC----Ce
Q 011596 280 ----AG---ANIVYRHRILRDG----YKAGNLKSAMNCS-YVKDYEFVAIFDADFQPN-PDFLRRTVPHFKDNE----EL 342 (482)
Q Consensus 280 ----~~---v~vv~~~~~~~~g----~Ka~aln~al~~~-~~a~~d~Vl~lDaD~~~~-pd~L~~lv~~f~~~p----~v 342 (482)
.+ .+++|+.|+++.| .||||||..++.+ ...+++||+.+|+|+.++ |+.+++.+.+|. || ++
T Consensus 489 ~~d~~g~~lP~LVYVSREKrPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmY~Nns~alr~AMCffl-Dp~~g~~v 567 (1040)
T PLN02189 489 GHDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNAPFMLNLDCDHYINNSKAVREAMCFLM-DPQIGRKV 567 (1040)
T ss_pred CccccccccceeEEEeccCCCCCCcccchhhHHHHHHHhhhccCCCeEEEccCccccCchHHHHHhhhhhc-CCccCcee
Confidence 00 1388888887655 7999999999764 357899999999999885 699999999998 57 89
Q ss_pred EEEeeeeeeecCCCChHHHHHhhhhhhhhhhhhhhccccccccccccceEeeeHHHHHHc--------------------
Q 011596 343 GLVQARWSFVNKDENLLTRLQDINLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEDS-------------------- 402 (482)
Q Consensus 343 ~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~i-------------------- 402 (482)
+.||.++.+.|.+.+-. ..+-...++-...+..++..+.+ ++|+++++||+++-..
T Consensus 568 AfVQFPQrF~~i~k~D~--Ygn~~~vffdi~~~GlDGlqGP~--YvGTGC~fRR~ALyG~~p~~~~~~~~~~~~~~~~~~ 643 (1040)
T PLN02189 568 CYVQFPQRFDGIDTHDR--YANRNTVFFDINMKGLDGIQGPV--YVGTGCVFRRQALYGYDPPKGPKRPKMVTCDCCPCF 643 (1040)
T ss_pred EEEeCccccCCCCCCCc--cCCccceeeeeeecccccCCCcc--ccccCceeeeeeeeccCcccccccccccccchhhhc
Confidence 99999999988765311 11111111112223334443333 6788888888765421
Q ss_pred --------------------------------------------------------------------------------
Q 011596 403 -------------------------------------------------------------------------------- 402 (482)
Q Consensus 403 -------------------------------------------------------------------------------- 402 (482)
T Consensus 644 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~S~~fi~S~~~~~~~~~~~~~~~~~l~eA~~V~sC~YE~~ 723 (1040)
T PLN02189 644 GRRKKKHAKNGLNGEVAALGGMESDKEMLMSQMNFEKKFGQSAIFVTSTLMEEGGVPPSSSPAALLKEAIHVISCGYEDK 723 (1040)
T ss_pred ccccccccccccccccccccccchhhhhhhhhhhhHhhhccchhhhhhhhhhhcCCCCCCCcHHHHHHHHHhhccccccC
Confidence
Q ss_pred ---C---CCCCCCchhHHHHHHHHHHCCCcEEEec--cceecccCCcCHHHHHHHHHhhhhhhHHHHHHhChhhh----h
Q 011596 403 ---G---GWMERTTVEDMDIAVRAHLRGWKFIFLN--DVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDII----R 470 (482)
Q Consensus 403 ---G---gf~~~~~~ED~~l~~rl~~~G~ki~~~~--~~~~~~~~p~t~~~~~~qr~RW~~G~~q~~~~~~~~i~----~ 470 (482)
| ||..++++||+..+++++.+||+.+|+. .+...+.+|+++.+++.||.||+.|.+|++......++ +
T Consensus 724 T~WG~evGw~YGSvTED~~TG~rlH~rGWrSvY~~p~r~AF~GlAP~~L~~~L~Qr~RWA~G~lqI~~sr~nPl~~g~~~ 803 (1040)
T PLN02189 724 TDWGLELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRAAFKGSAPINLSDRLNQVLRWALGSVEIFFSRHSPLLYGYKG 803 (1040)
T ss_pred CchhhccCeeccccccHHHHHHHHHccCCceEecCCCcHHhcCcCCCCHHHHHHHHHHHhhhhHHHhhccCCccccccCC
Confidence 0 3444457899999999999999999995 34467999999999999999999999999986665555 2
Q ss_pred cCcchhhcc
Q 011596 471 AKVYILSNT 479 (482)
Q Consensus 471 s~~~~~~k~ 479 (482)
.++.+.+|+
T Consensus 804 ~~L~l~QRL 812 (1040)
T PLN02189 804 GNLKWLERF 812 (1040)
T ss_pred CCCCHHHHH
Confidence 468888875
|
|
| >PLN02195 cellulose synthase A | Back alignment and domain information |
|---|
Probab=99.92 E-value=1e-23 Score=227.56 Aligned_cols=256 Identities=20% Similarity=0.273 Sum_probs=186.0
Q ss_pred CCCCeEEEEeecCCch----HHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHH--------------------
Q 011596 218 GFFPMVLVQIPMCNEK----EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEE-------------------- 273 (482)
Q Consensus 218 ~~~P~VsViIP~yne~----~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~-------------------- 273 (482)
.++|.|+|.|+|-+.. -...+|+-|+++.|||.+++-++|.|||...-|-+.+.|.
T Consensus 249 s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FA~~WvPFCkK~~IepRa 328 (977)
T PLN02195 249 SQLAAVDFFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGAAMLSFESLVETAEFARKWVPFCKKYSIEPRA 328 (977)
T ss_pred ccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHHHHHHhhcccccccCCCcCC
Confidence 3699999999997654 5888999999999999999999999998655544433321
Q ss_pred -----------------------------------------HHH---hhh------------------------------
Q 011596 274 -----------------------------------------VLK---WQE------------------------------ 279 (482)
Q Consensus 274 -----------------------------------------~~~---~~~------------------------------ 279 (482)
.++ .++
T Consensus 329 Pe~YFs~~~~~~~~~~~~~F~~e~~~~K~eYEe~k~RIe~~~~~~~~~~~~~~~m~d~t~W~g~~~~dHp~IIqVll~~~ 408 (977)
T PLN02195 329 PEFYFSQKIDYLKDKVQPSFVKERRAMKRDYEEYKVRVNALVAKAQKTPEEGWTMQDGTPWPGNNTRDHPGMIQVFLGET 408 (977)
T ss_pred HHHHhccCCCcccCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCcccccccCCccCCCCCCCCCcchhhhhccCC
Confidence 000 000
Q ss_pred --------CCCeEEEEeccCCCC----CccccHHHHhhhc-ccCCceEEEEEcCCCCCCh-HHHHHHHHHhhcCC----C
Q 011596 280 --------AGANIVYRHRILRDG----YKAGNLKSAMNCS-YVKDYEFVAIFDADFQPNP-DFLRRTVPHFKDNE----E 341 (482)
Q Consensus 280 --------~~v~vv~~~~~~~~g----~Ka~aln~al~~~-~~a~~d~Vl~lDaD~~~~p-d~L~~lv~~f~~~p----~ 341 (482)
.-.+++|+.|+++.| .|+||+|.+++.+ ...+++||+.+|+|+.+++ +++++.+.+|. || +
T Consensus 409 ~~~d~~g~~lP~LVYVSREKrPg~~Hh~KAGamNallrvSavmTNap~il~lDcDmy~n~s~~lr~AMCf~~-D~~~g~~ 487 (977)
T PLN02195 409 GARDIEGNELPRLVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAPYILNLDCDHYVNNSKAVREAMCFLM-DPVVGRD 487 (977)
T ss_pred CCcccccccCceeEEEeccCCCCCCcccccchhHHHHHHhhhccCCCeEEEecCccccCcHHHHHHHHhhcc-CcccCCe
Confidence 002477777777655 6999999999864 3578999999999997755 79999999987 56 7
Q ss_pred eEEEeeeeeeecCCCCh-HHHHHhhhhhhhhhhhhhhccccccccccccceEeeeHHHHHHcC-----------------
Q 011596 342 LGLVQARWSFVNKDENL-LTRLQDINLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEDSG----------------- 403 (482)
Q Consensus 342 v~~V~~~~~~~n~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~iG----------------- 403 (482)
++.||.++.+.|.+.+- +..-....+ ....+..++..+.+ ++|+++++||+++-..+
T Consensus 488 va~VQ~PQ~F~~i~~~D~y~~~~~~ff---d~~~~g~dglqGP~--YvGTGC~fRR~ALyG~~p~~~~~~~~~~~~~~~~ 562 (977)
T PLN02195 488 VCYVQFPQRFDGIDRSDRYANRNVVFF---DVNMKGLDGIQGPV--YVGTGCVFNRQALYGYGPPSLPRLPKSSSSSSSC 562 (977)
T ss_pred eEEEcCCcccCCCCCCCCCCcccceee---eeeeccccccCCcc--ccccCceeeehhhhccCccccccccccccccccc
Confidence 78999999998876431 111111111 11122233333333 67888888887765321
Q ss_pred --------------------------------------------------------------------------------
Q 011596 404 -------------------------------------------------------------------------------- 403 (482)
Q Consensus 404 -------------------------------------------------------------------------------- 403 (482)
T Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~fG~S~~fi~S~~~~~~~~~~~~~~~~ 642 (977)
T PLN02195 563 CCPTKKKPEQDPSEIYRDAKREDLNAAIFNLREIDNYDEYERSMLISQMSFEKTFGLSSVFIESTLMENGGVPESANPST 642 (977)
T ss_pred cccccccccccchhhccccccccccccccccccccccchhhhhhhhhhhHHHHhhcccHHHHHHHHHHhcCCCCCCCcHH
Confidence
Q ss_pred -----------------------CCCCCCchhHHHHHHHHHHCCCcEEEeccc--eecccCCcCHHHHHHHHHhhhhhhH
Q 011596 404 -----------------------GWMERTTVEDMDIAVRAHLRGWKFIFLNDV--ECQCELPESYEAYRKQQHRWHSGPM 458 (482)
Q Consensus 404 -----------------------gf~~~~~~ED~~l~~rl~~~G~ki~~~~~~--~~~~~~p~t~~~~~~qr~RW~~G~~ 458 (482)
||..++++||+..+++++.+||+.+|++.. ...+..|+++.+++.||.||+.|.+
T Consensus 643 ~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTEDv~TG~rlH~rGWrSvY~~p~r~af~G~AP~~L~~~L~Qr~RWA~G~l 722 (977)
T PLN02195 643 LIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWRSIYCMPVRPAFKGSAPINLSDRLHQVLRWALGSV 722 (977)
T ss_pred HHHHHHhhhcccCccccchhhhcCeeccceecHHHHHHHHHccCCcEEecCCccHHhcccCCCCHHHHHHHHHHHHhchh
Confidence 233344789999999999999999998754 3688999999999999999999999
Q ss_pred HHHHHhChhhhh----cCcchhhcc
Q 011596 459 QLFRLCLPDIIR----AKVYILSNT 479 (482)
Q Consensus 459 q~~~~~~~~i~~----s~~~~~~k~ 479 (482)
|++......++. .++.|.+|+
T Consensus 723 qI~~sr~nPl~~g~~~~~L~~~QRL 747 (977)
T PLN02195 723 EIFLSRHCPLWYGYGGGRLKWLQRL 747 (977)
T ss_pred hhhhccCCccccccCCCCCCHHHHH
Confidence 999866655542 578888875
|
|
| >cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis | Back alignment and domain information |
|---|
Probab=99.92 E-value=4e-24 Score=199.48 Aligned_cols=196 Identities=17% Similarity=0.276 Sum_probs=144.1
Q ss_pred CeEEEEeecCCch-HHHHHHHHHHHhCCCCCCceEEEEEcCCCCHH-HHHHHHHHHHHhhhCCCeEEEEeccCCCCCccc
Q 011596 221 PMVLVQIPMCNEK-EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPT-AQTLIKEEVLKWQEAGANIVYRHRILRDGYKAG 298 (482)
Q Consensus 221 P~VsViIP~yne~-~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~-t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~ 298 (482)
|++||+||+||++ +.+++||+|+++|+|++ ++|+|+||+|+|. +.++++.+..+ ...+. +...+ .+++++.
T Consensus 1 p~vsiii~~~n~~~~~l~~~l~sl~~q~~~~--~eiivvd~gs~d~~~~~~~~~~~~~--~~~~~--~~~~~-~~~g~~~ 73 (202)
T cd04184 1 PLISIVMPVYNTPEKYLREAIESVRAQTYPN--WELCIADDASTDPEVKRVLKKYAAQ--DPRIK--VVFRE-ENGGISA 73 (202)
T ss_pred CeEEEEEecccCcHHHHHHHHHHHHhCcCCC--eEEEEEeCCCCChHHHHHHHHHHhc--CCCEE--EEEcc-cCCCHHH
Confidence 6799999999999 99999999999999986 6789999988764 54555544332 12233 33333 3445899
Q ss_pred cHHHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHHHHhhhhhhhhhhhhhhc
Q 011596 299 NLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQQVN 378 (482)
Q Consensus 299 aln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (482)
++|.|++ .+++||++++|+|+.++|++|++++..+..+|+++++.+...................+. ... .
T Consensus 74 a~n~g~~---~a~~d~i~~ld~D~~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~--~~~---~- 144 (202)
T cd04184 74 ATNSALE---LATGEFVALLDHDDELAPHALYEVVKALNEHPDADLIYSDEDKIDEGGKRSEPFFKPDWS--PDL---L- 144 (202)
T ss_pred HHHHHHH---hhcCCEEEEECCCCcCChHHHHHHHHHHHhCCCCCEEEccHHhccCCCCEeccccCCCCC--HHH---h-
Confidence 9999999 578999999999999999999999999966799999877654333222111111000000 000 0
Q ss_pred cccccccccccceEeeeHHHHHHcCCCCCC-CchhHHHHHHHHHHCCCcEEEeccceec
Q 011596 379 GVFINFFGFNGTAGVWRIKALEDSGGWMER-TTVEDMDIAVRAHLRGWKFIFLNDVECQ 436 (482)
Q Consensus 379 ~~~~~~~~~~G~~~~~Rr~~l~~iGgf~~~-~~~ED~~l~~rl~~~G~ki~~~~~~~~~ 436 (482)
....+.++++++||++++++|||++. ...||++++.|+.++|+++.++|++...
T Consensus 145 ----~~~~~~~~~~~~~r~~~~~iggf~~~~~~~eD~~l~~rl~~~g~~~~~~~~~~~~ 199 (202)
T cd04184 145 ----LSQNYIGHLLVYRRSLVRQVGGFREGFEGAQDYDLVLRVSEHTDRIAHIPRVLYH 199 (202)
T ss_pred ----hhcCCccceEeEEHHHHHHhCCCCcCcccchhHHHHHHHHhccceEEEccHhhhh
Confidence 00124577789999999999999876 4579999999999999999999987643
|
The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. |
| >cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.6e-24 Score=198.01 Aligned_cols=196 Identities=16% Similarity=0.195 Sum_probs=147.0
Q ss_pred EEEeecCCch--HHHHHHHHHHHhCCCCCCceEEEEEcCCC-CHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccH
Q 011596 224 LVQIPMCNEK--EVYQQSIAAVCNLDWPKSKILIQVLDDSD-DPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNL 300 (482)
Q Consensus 224 sViIP~yne~--~~l~~tL~Sll~q~yp~~~~~IiVvDdss-dd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~al 300 (482)
||+||+||++ +.+++||+|+++|+|++ .+|+|+||++ +|.+.++++++.++ .++++ ...+.+. |++.++
T Consensus 1 sviip~~n~~~~~~l~~~l~Sl~~q~~~~--~eiiivdd~ss~d~t~~~~~~~~~~---~~i~~--i~~~~n~-G~~~a~ 72 (201)
T cd04195 1 SVLMSVYIKEKPEFLREALESILKQTLPP--DEVVLVKDGPVTQSLNEVLEEFKRK---LPLKV--VPLEKNR-GLGKAL 72 (201)
T ss_pred CEEEEccccchHHHHHHHHHHHHhcCCCC--cEEEEEECCCCchhHHHHHHHHHhc---CCeEE--EEcCccc-cHHHHH
Confidence 6999999997 69999999999999986 4577777765 88888888776553 23433 3334444 489999
Q ss_pred HHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHHHHhhhhhhhhhhhhhhccc
Q 011596 301 KSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQQVNGV 380 (482)
Q Consensus 301 n~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (482)
|.|++ .+++|||+++|+|+.++|+++++++..+.++|+++++++.......+............ ........
T Consensus 73 N~g~~---~a~gd~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~--- 144 (201)
T cd04195 73 NEGLK---HCTYDWVARMDTDDISLPDRFEKQLDFIEKNPEIDIVGGGVLEFDSDGNDIGKRRLPTS--HDDILKFA--- 144 (201)
T ss_pred HHHHH---hcCCCEEEEeCCccccCcHHHHHHHHHHHhCCCeEEEcccEEEECCCCCeeccccCCCC--HHHHHHHh---
Confidence 99999 68999999999999999999999999998889999999887665443321110000000 00000000
Q ss_pred cccccccccceEeeeHHHHHHcCCCCCCCchhHHHHHHHHHHCCCcEEEeccceec
Q 011596 381 FINFFGFNGTAGVWRIKALEDSGGWMERTTVEDMDIAVRAHLRGWKFIFLNDVECQ 436 (482)
Q Consensus 381 ~~~~~~~~G~~~~~Rr~~l~~iGgf~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~ 436 (482)
....++.+.++++||++++++|+|++....||++++.++..+|+++.++|++.++
T Consensus 145 -~~~~~~~~~~~~~rr~~~~~~g~~~~~~~~eD~~~~~r~~~~g~~~~~~~~~~~~ 199 (201)
T cd04195 145 -RRRSPFNHPTVMFRKSKVLAVGGYQDLPLVEDYALWARMLANGARFANLPEILVK 199 (201)
T ss_pred -ccCCCCCChHHhhhHHHHHHcCCcCCCCCchHHHHHHHHHHcCCceecccHHHhh
Confidence 0112245677899999999999998888899999999999999999999987654
|
AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. |
| >COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.9e-22 Score=201.82 Aligned_cols=282 Identities=22% Similarity=0.244 Sum_probs=208.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccCCCCCCCeEEEEeecCCch-----HHHHHHHHHHHhCCC
Q 011596 174 CIVLFLIQSLDRLILCLGCFWIRFKRIKPVPKHDDTSDLESGQKGFFPMVLVQIPMCNEK-----EVYQQSIAAVCNLDW 248 (482)
Q Consensus 174 ~~~lf~i~~~~~l~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~P~VsViIP~yne~-----~~l~~tL~Sll~q~y 248 (482)
..++|..++......+.|++.....+.++....+ +++.. +.....|++|+|||+ ..++.+.+|+.+...
T Consensus 103 fa~lFcwvs~~F~tAl~GF~~L~~~~~r~~~~~p----~~p~p--~~hrTAilmPiynEd~~rVfAgLrA~~eSla~Tg~ 176 (736)
T COG2943 103 FAVLFCWVSAGFWTALMGFLVLLFGRDRYLSIAP----NEPLP--DLHRTAILMPIYNEDVNRVFAGLRATYESLAATGH 176 (736)
T ss_pred HHHHHHHHHHHHHHHHHHHhheeecCCCcCCCCC----CCCCC--cccceeEEeeccccCHHHHHHHHHHHHHHHHhhCC
Confidence 3445555555555666777666655555533221 11111 234589999999998 578888889887554
Q ss_pred CCCceEEEEEcCCCCHHHHHHHH-H---HHHHhhhCCCeEEEEeccCCCCCccccHHHHhhhcccCCceEEEEEcCCCCC
Q 011596 249 PKSKILIQVLDDSDDPTAQTLIK-E---EVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQP 324 (482)
Q Consensus 249 p~~~~~IiVvDdssdd~t~~~~~-~---~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al~~~~~a~~d~Vl~lDaD~~~ 324 (482)
.+++.++|+.|+.|++..-.-+ + +.++. +...++.|+.|.+|.+.|++|+..-.++ +...|+|.+++|||.++
T Consensus 177 -~~~FD~FVLSDs~dpdialAEq~a~~~l~~e~-~g~~~ifYRrRr~n~~RKaGNIaDfcrR-wG~~Y~~MlVLDADSvM 253 (736)
T COG2943 177 -AEHFDFFVLSDSRDPDIALAEQKAWAELCREL-GGEGNIFYRRRRRNVKRKAGNIADFCRR-WGSAYSYMLVLDADSVM 253 (736)
T ss_pred -cccceEEEEcCCCCchhhhhHHHHHHHHHHHh-CCCCceeeehHhhhhcccccCHHHHHHH-hCcccceEEEeeccccc
Confidence 4478999999998887642111 1 11211 2337889999999999999999987764 46889999999999999
Q ss_pred ChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHHHHhhhhhhhhhhhhhh-ccccccccccccceEeeeHHHHHHcC
Q 011596 325 NPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQQV-NGVFINFFGFNGTAGVWRIKALEDSG 403 (482)
Q Consensus 325 ~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~G~~~~~Rr~~l~~iG 403 (482)
.+||+.++++.|+.||+.|++|+.....|. +.++.+.|.+....+.+..... .-+...-..+.|+|.++|.++|-+.-
T Consensus 254 tgd~lvrLv~~ME~~P~aGlIQt~P~~~gg-~TL~AR~qQFatrvYGpl~~~GLawW~~~Es~yWGHNAIIRt~aF~~hc 332 (736)
T COG2943 254 TGDCLVRLVRLMEANPDAGLIQTSPKASGG-DTLYARCQQFATRVYGPLFTAGLAWWQLGESHYWGHNAIIRTKAFIEHC 332 (736)
T ss_pred CchHHHHHHHHHhhCCCCceeecchhhcCc-chHHHHHHHHHHHHhchHHhhhhHHHhccccccccccceeechhhHHhc
Confidence 999999999999999999999999887777 4788888877654443332211 11111222378999999999999863
Q ss_pred C---------CCCCCchhHHHHHHHHHHCCCcEEEeccce-ecccCCcCHHHHHHHHHhhhhhhHHHHHHhC
Q 011596 404 G---------WMERTTVEDMDIAVRAHLRGWKFIFLNDVE-CQCELPESYEAYRKQQHRWHSGPMQLFRLCL 465 (482)
Q Consensus 404 g---------f~~~~~~ED~~l~~rl~~~G~ki~~~~~~~-~~~~~p~t~~~~~~qr~RW~~G~~q~~~~~~ 465 (482)
| |.....+.|+.-+-.+.+.||.+...++-- .|+|.|+|+-++.++-+|||+|++|.++...
T Consensus 333 gLp~LpG~~pFgG~ilSHDfvEAALmRRaGW~v~ia~dL~GSyEE~PpnLlD~l~RDRRWC~GNLqh~rl~~ 404 (736)
T COG2943 333 GLPPLPGRGPFGGHILSHDFVEAALMRRAGWGVWIAYDLDGSYEELPPNLLDELKRDRRWCHGNLQHFRLFL 404 (736)
T ss_pred CCCCCCCCCCCCccccchHHHHHHHHhhcCceEEEeccCCCchhhCCchHHHHHhhhhHhhhcchhhceeec
Confidence 3 444456789999999999999999999877 8999999999999999999999999876543
|
|
| >PLN02638 cellulose synthase A (UDP-forming), catalytic subunit | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.7e-23 Score=226.19 Aligned_cols=257 Identities=23% Similarity=0.307 Sum_probs=187.1
Q ss_pred CCCCeEEEEeecCCch----HHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHH--------------------
Q 011596 218 GFFPMVLVQIPMCNEK----EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEE-------------------- 273 (482)
Q Consensus 218 ~~~P~VsViIP~yne~----~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~-------------------- 273 (482)
.++|.|+|+|+|-+.. -...+|+-|+++.|||.+++-++|.|||...-|-+.+.|.
T Consensus 346 s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FA~~WvPFCkK~~IepRa 425 (1079)
T PLN02638 346 SQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARKWVPFCKKYNIEPRA 425 (1079)
T ss_pred ccCCCccEEEeCCCCccCccHHHHHHHHHHHhhcccccceeEEEecCCchHHHHHHHHHHHHHHHhhcccccccCCCcCC
Confidence 3699999999997654 5888999999999999999999999998655554433322
Q ss_pred -------------------------------------HH-------Hhhh------------------------------
Q 011596 274 -------------------------------------VL-------KWQE------------------------------ 279 (482)
Q Consensus 274 -------------------------------------~~-------~~~~------------------------------ 279 (482)
++ +.++
T Consensus 426 Pe~YFs~~~~~~~~~~~~~F~~e~~~mK~eYEe~k~RIe~l~a~~~~~p~~~~~m~dgt~W~g~~~~dHp~IiqVll~~~ 505 (1079)
T PLN02638 426 PEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKVRINGLVAKAQKVPEEGWIMQDGTPWPGNNTRDHPGMIQVFLGHS 505 (1079)
T ss_pred HHHHhccCCCcccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhccccCCccccccCCccCCCCCCCCCHHHHHHHhcCC
Confidence 00 0000
Q ss_pred -----CC---CeEEEEeccCCCC----CccccHHHHhhhc-ccCCceEEEEEcCCCCCC-hHHHHHHHHHhhcCCC----
Q 011596 280 -----AG---ANIVYRHRILRDG----YKAGNLKSAMNCS-YVKDYEFVAIFDADFQPN-PDFLRRTVPHFKDNEE---- 341 (482)
Q Consensus 280 -----~~---v~vv~~~~~~~~g----~Ka~aln~al~~~-~~a~~d~Vl~lDaD~~~~-pd~L~~lv~~f~~~p~---- 341 (482)
.+ .+++|+.|+++.| .||||||..++.+ ...+++||+.+|+|+.++ |+.+++.+.+|. ||+
T Consensus 506 ~~~d~~g~~lP~LVYVSREKRPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmYiNns~alr~AMCf~l-Dp~~g~~ 584 (1079)
T PLN02638 506 GGLDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFLM-DPNLGKS 584 (1079)
T ss_pred CccccccccccceEEEecccCCCCCcccccchHHHHHHHhhhccCCCeEeecccCcccCchHHHHHhhhhhc-CcccCCe
Confidence 00 1358888887655 7999999999864 457899999999999775 999999999987 564
Q ss_pred eEEEeeeeeeecCCCChHHHHHhhhhhhhhhhhhhhccccccccccccceEeeeHHHHHHc-------------------
Q 011596 342 LGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEDS------------------- 402 (482)
Q Consensus 342 v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~i------------------- 402 (482)
++.||.++.+.|.+.+- +..+-...++-...+..++..+.+ +.|+++++||+++-..
T Consensus 585 vafVQFPQrF~~i~k~D--~Ygn~~~vffdi~~~GlDGlqGP~--YvGTGC~fRR~ALYG~~p~~~~~~~~~~~~~~~~~ 660 (1079)
T PLN02638 585 VCYVQFPQRFDGIDRND--RYANRNTVFFDINLRGLDGIQGPV--YVGTGCVFNRTALYGYEPPIKPKHKKPGFLSSLCG 660 (1079)
T ss_pred eEEecCCcccCCCCCCC--cccccceeeeccccccccccCCcc--ccccCcceeehhhcCcCCccccccccccccccccc
Confidence 88999999998876531 111111111112223334443333 6788888888776421
Q ss_pred --------------------------------------------------------------------------------
Q 011596 403 -------------------------------------------------------------------------------- 402 (482)
Q Consensus 403 -------------------------------------------------------------------------------- 402 (482)
T Consensus 661 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~S~~fi~S~~~~~~~~~~ 740 (1079)
T PLN02638 661 GSRKKSSKSSKKGSDKKKSGKHVDPTVPVFNLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQ 740 (1079)
T ss_pred ccccccccccchhhccccccccccccccccccccccccccccccchhhhhhhhhhhhhhhccccHHHHHHHHHhhcCCCC
Confidence
Q ss_pred -------------------------C---CCCCCCchhHHHHHHHHHHCCCcEEEe-ccc-eecccCCcCHHHHHHHHHh
Q 011596 403 -------------------------G---GWMERTTVEDMDIAVRAHLRGWKFIFL-NDV-ECQCELPESYEAYRKQQHR 452 (482)
Q Consensus 403 -------------------------G---gf~~~~~~ED~~l~~rl~~~G~ki~~~-~~~-~~~~~~p~t~~~~~~qr~R 452 (482)
| ||..++++||+..+++++.+||+.+|+ |+. ...+.+|+++.+++.||.|
T Consensus 741 ~~~~~s~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTEDv~TG~rLH~rGWrSvY~~P~r~AF~GlAP~~l~d~L~Qr~R 820 (1079)
T PLN02638 741 SATPESLLKEAIHVISCGYEDKTDWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLR 820 (1079)
T ss_pred CCCcHHHHHHHHhhccCCCccCCchhhhcCeeecceecHHHHHHHHHcCCCcEEecCCCchHhcCcCCCCHHHHHHHHHH
Confidence 0 122334789999999999999999999 433 3679999999999999999
Q ss_pred hhhhhHHHHHHhChhhh---hcCcchhhcc
Q 011596 453 WHSGPMQLFRLCLPDII---RAKVYILSNT 479 (482)
Q Consensus 453 W~~G~~q~~~~~~~~i~---~s~~~~~~k~ 479 (482)
|+.|.+|++......++ +.++.+.+|+
T Consensus 821 WA~G~lqI~fsr~nPl~~G~~~rL~l~QRL 850 (1079)
T PLN02638 821 WALGSVEILFSRHCPIWYGYGGRLKWLERF 850 (1079)
T ss_pred HhhcchheeeccCCccccccCCCCCHHHHH
Confidence 99999999975554455 3578888875
|
|
| >cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.4e-23 Score=195.20 Aligned_cols=181 Identities=25% Similarity=0.365 Sum_probs=141.8
Q ss_pred EEeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHh
Q 011596 225 VQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAM 304 (482)
Q Consensus 225 ViIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al 304 (482)
|+||+|||+++|.+||+|+.+|+ |+ ++|+|+||+|+|.+.++++ ... ...+++++....+..++||+.++|.|+
T Consensus 1 ViIp~~Ne~~~l~~~l~sl~~~~-~~--~eIivvdd~S~D~t~~~~~-~~~--~~~~v~~i~~~~~~~~~Gk~~aln~g~ 74 (191)
T cd06436 1 VLVPCLNEEAVIQRTLASLLRNK-PN--FLVLVIDDASDDDTAGIVR-LAI--TDSRVHLLRRHLPNARTGKGDALNAAY 74 (191)
T ss_pred CEEeccccHHHHHHHHHHHHhCC-CC--eEEEEEECCCCcCHHHHHh-hee--cCCcEEEEeccCCcCCCCHHHHHHHHH
Confidence 68999999999999999999998 54 7899999999999988876 211 123444443222333456999999999
Q ss_pred hhcc--------cCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHHHHhhhhhhhhhhhhh
Q 011596 305 NCSY--------VKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQQ 376 (482)
Q Consensus 305 ~~~~--------~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~ 376 (482)
+.+. ..++|+|+++|+|+.++|++|+++...+. +|+++++++.....|.+.++.++++.+++.......+.
T Consensus 75 ~~~~~~~~~~g~~~~~d~v~~~DaD~~~~~~~l~~~~~~~~-~~~v~~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 153 (191)
T cd06436 75 DQIRQILIEEGADPERVIIAVIDADGRLDPNALEAVAPYFS-DPRVAGTQSRVRMYNRHKNLLTILQDLEFFIIIAATQS 153 (191)
T ss_pred HHHhhhccccccCCCccEEEEECCCCCcCHhHHHHHHHhhc-CCceEEEeeeEEEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 8531 11358999999999999999999888886 79999999999888888899999999988766655555
Q ss_pred hccccccccccccceEeeeHHHHHHcCCCCCC--CchhH
Q 011596 377 VNGVFINFFGFNGTAGVWRIKALEDSGGWMER--TTVED 413 (482)
Q Consensus 377 ~~~~~~~~~~~~G~~~~~Rr~~l~~iGgf~~~--~~~ED 413 (482)
...... ..++.|+++++|+++++++|||.+. .++||
T Consensus 154 ~~~~~~-~~~~~G~~~~~r~~~l~~vgg~~~~~~~~~ED 191 (191)
T cd06436 154 LRALTG-TVGLGGNGQFMRLSALDGLIGEEPWSDSLLED 191 (191)
T ss_pred HHHhcC-cEEECCeeEEEeHHHHHHhhcCCCCchhhcCC
Confidence 544443 3457899999999999999776553 67776
|
N-acetyl-glucosamine transferase is responsible for the synthesis of bacteria Poly-beta-1,6-N-acetyl-D-glucosamine (PGA). Poly-beta-1,6-N-acetyl-D-glucosamine is a homopolymer that serves as an adhesion for the maintenance of biofilm structural stability in diverse eubacteria. N-acetyl-glucosamine transferase is the product of gene pgaC. Genetic analysis indicated that all four genes of the pgaABCD locus were required for the PGA production, pgaC being a glycosyltransferase. |
| >PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2 | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.2e-23 Score=214.61 Aligned_cols=242 Identities=19% Similarity=0.277 Sum_probs=190.4
Q ss_pred CCCeEEEEeecCCch-HHHHHHHHHHHhCCCCCC-ceEEEEEcC-----CCCHHHHHHHHHHHHHhh-------------
Q 011596 219 FFPMVLVQIPMCNEK-EVYQQSIAAVCNLDWPKS-KILIQVLDD-----SDDPTAQTLIKEEVLKWQ------------- 278 (482)
Q Consensus 219 ~~P~VsViIP~yne~-~~l~~tL~Sll~q~yp~~-~~~IiVvDd-----ssdd~t~~~~~~~~~~~~------------- 278 (482)
..+.+-.+||||||. +.|++||+|+..++||+. ++.++|+|+ |.+.+|.+++......+.
T Consensus 23 ~~~~~i~~v~cy~E~~~~l~~tldsl~~~~y~~~~k~~~vi~DG~i~g~g~~~~tp~~~l~~~~~~~~~~~~~~~~~~~~ 102 (527)
T PF03142_consen 23 PDKFVICLVPCYSEGEEELRTTLDSLATTDYDDSRKLIFVICDGMIKGSGNDKTTPEIVLDILGDFVDPPEDPEPLSYVS 102 (527)
T ss_pred CCceEEEEEccccCChHHHHHHHHHHHhcCCCCcccEEEEEcCcEEecCCCCCChHHHHHHhhcccCCCcCCCCCcceEE
Confidence 456788999999997 999999999999999976 455555665 577788887766543000
Q ss_pred ------------------------------hCCCeEEEEec-----------cCCCCCccccHHHHhhhc----------
Q 011596 279 ------------------------------EAGANIVYRHR-----------ILRDGYKAGNLKSAMNCS---------- 307 (482)
Q Consensus 279 ------------------------------~~~v~vv~~~~-----------~~~~g~Ka~aln~al~~~---------- 307 (482)
+.++..+.+-. +.|. ||+..+-..+...
T Consensus 103 ~~~g~~~~n~~~vy~g~y~~~~~~~~~~~~~~~vp~~~vvk~g~~~e~~~~k~~Nr-GKRDsq~~~~~fl~~~~~~~~~~ 181 (527)
T PF03142_consen 103 LGEGSKQHNMAKVYSGFYEYDGDSHVPPEKQQRVPYIVVVKCGTPSERSSPKPGNR-GKRDSQILLMSFLNKVHFNNPMT 181 (527)
T ss_pred eccCchhhcCEEEEEEEEecCCccccccccccccCEEEEEEcCChHHhcccccccC-CchHHHHHHHHHHHHHhcCCCCc
Confidence 00122222212 2233 4775433222210
Q ss_pred ----------------ccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHHHHhhhhhhhh
Q 011596 308 ----------------YVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHF 371 (482)
Q Consensus 308 ----------------~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~ 371 (482)
....+|||+.+|||+.+.|+++.+++..|.+||++++++|.....|...++++..|.++|...+
T Consensus 182 ~~~~e~~~~i~~~~g~~~~~~~~il~~DaDt~~~p~~~~~lv~~m~~d~~i~gvCG~t~i~n~~~s~~t~~Q~fEY~ish 261 (527)
T PF03142_consen 182 PLELELFHQIWNIIGVDPDFYEYILMVDADTKFDPDSVNRLVDAMERDPKIGGVCGETRIDNKGQSWWTMYQVFEYAISH 261 (527)
T ss_pred hHHHHHHHHHHHHhccCccceEEEEEecCCceEcHHHHHHHHHHHcCCCCeEEEeceeEEcCCCCCHhhheeccchhHHH
Confidence 1345799999999999999999999999999999999999988899999999999999999999
Q ss_pred hhhhhhccccccccccccceEeeeHHHHHHc--------------CCCCC-----------CCchhHHHHHHHHHHC--C
Q 011596 372 EVEQQVNGVFINFFGFNGTAGVWRIKALEDS--------------GGWME-----------RTTVEDMDIAVRAHLR--G 424 (482)
Q Consensus 372 ~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~i--------------Ggf~~-----------~~~~ED~~l~~rl~~~--G 424 (482)
...+..++.++.+.|+.|+++++|.++++.- .+|.+ ...+||..++..+.++ |
T Consensus 262 ~l~Ka~Es~fG~VtCLPGcfsmyR~~a~~~~~~~~~p~l~~~~i~~~Y~~~~~dtlh~~nl~~lGEDR~LttLlLk~~~~ 341 (527)
T PF03142_consen 262 HLQKAFESVFGSVTCLPGCFSMYRISALMDGDGYWVPLLISPDIIEKYSENPVDTLHQKNLLDLGEDRWLTTLLLKQFPG 341 (527)
T ss_pred HHHHHHHHHhCceeecCCcceeeeeehhccccccccccccchHHHHHHhhccchHHHHHhhhhcchhHHHHHHHHhhCCC
Confidence 9999999999999999999999999987761 11211 1467999999888887 8
Q ss_pred CcEEEeccceecccCCcCHHHHHHHHHhhhhhhHHHH
Q 011596 425 WKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLF 461 (482)
Q Consensus 425 ~ki~~~~~~~~~~~~p~t~~~~~~qr~RW~~G~~q~~ 461 (482)
|++.|+|++.+++.+|++++.+++||+||..|.+...
T Consensus 342 ~k~~y~~~A~a~T~aP~t~~vflsQRRRWinSTi~Nl 378 (527)
T PF03142_consen 342 YKTEYVPSAVAYTDAPETFSVFLSQRRRWINSTIHNL 378 (527)
T ss_pred ceEEEcccccccccCCccHHHHHHHhhhccchhHhhH
Confidence 9999999999999999999999999999999887553
|
4.1.16 from EC), also known as chitin-UDP acetyl-glucosaminyl transferase, is a plasma membrane-bound protein which catalyses the conversion of UDP-N-acettyl-D-glucosamine and {(1,4)-(N-acetyl- beta-D-glucosaminyl)}(N) to UDP and {(1,4)-(N-acetyl-beta-D- glucosaminyl)}(N+1). It plays a major role in cell wall biogenesis. ; GO: 0016758 transferase activity, transferring hexosyl groups |
| >PLN02248 cellulose synthase-like protein | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.7e-23 Score=221.71 Aligned_cols=192 Identities=23% Similarity=0.337 Sum_probs=140.1
Q ss_pred EEEEeccCCCC----CccccHHHHhhhc-ccCCceEEEEEcCCCCC-ChHHHHHHHHHhhc--CCCeEEEeeeeeeecCC
Q 011596 284 IVYRHRILRDG----YKAGNLKSAMNCS-YVKDYEFVAIFDADFQP-NPDFLRRTVPHFKD--NEELGLVQARWSFVNKD 355 (482)
Q Consensus 284 vv~~~~~~~~g----~Ka~aln~al~~~-~~a~~d~Vl~lDaD~~~-~pd~L~~lv~~f~~--~p~v~~V~~~~~~~n~~ 355 (482)
++|+.|+++.| .||||||..++.+ ...+++||+.+|+|+.+ ++..+++.+.+|.+ .++++.||.++.+.|.+
T Consensus 587 LVYVSREKRPg~~Hh~KAGAMNALlRVSavmTNgPfILNLDCDmYiNns~alr~AMCf~lD~~g~~vAfVQFPQrF~~I~ 666 (1135)
T PLN02248 587 LVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYIYNSLAIREGMCFMMDRGGDRICYVQFPQRFEGID 666 (1135)
T ss_pred eEEEecccCCCCCcccccchhhhHHHhhhhccCCCeEEEeccCcccCCchhHHhcchheecCCCCceEEEcCCcccCCCC
Confidence 55666665544 6999999888753 45789999999999987 56799999999984 37999999999998876
Q ss_pred CChHHHHHhhhhhhhhhhhhhhccccccccccccceEeeeHHHHHHc---------------------------------
Q 011596 356 ENLLTRLQDINLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEDS--------------------------------- 402 (482)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~i--------------------------------- 402 (482)
.+-. ..+-...++-...+..++..+.+ ++|+++++||+++-..
T Consensus 667 k~D~--Ygn~~~Vffdi~~~GlDGlqGP~--YvGTGCffRR~ALYG~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 742 (1135)
T PLN02248 667 PSDR--YANHNTVFFDVNMRALDGLQGPV--YVGTGCLFRRIALYGFDPPRAKEHSGCFGSCKFTKKKKKETSASEPEEQ 742 (1135)
T ss_pred CCCc--cCCcceeeeeeeeccccccCCcc--ccccCceeeehhhcCcCCccccccccccccccccccccccccccccccc
Confidence 5311 11111111112223334443333 6788888888766421
Q ss_pred --------------------------------------------------------------------------------
Q 011596 403 -------------------------------------------------------------------------------- 402 (482)
Q Consensus 403 -------------------------------------------------------------------------------- 402 (482)
T Consensus 743 ~~~~~~~~~~~~~~~~rfG~S~~fi~S~~~a~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~eA~~V~sC~YE~~T 822 (1135)
T PLN02248 743 PDLEDDDDLELSLLPKRFGNSTMFAASIPVAEFQGRPLADHPSVKNGRPPGALTVPREPLDAATVAEAISVISCWYEDKT 822 (1135)
T ss_pred ccccccchhhhhhhhhhhccchhhhhhhHHHhhcccccccccccccccccccccccccCCcHHHHHHHHhhcccccccCC
Confidence
Q ss_pred --C---CCCCCCchhHHHHHHHHHHCCCcEEEec--cceecccCCcCHHHHHHHHHhhhhhhHHHHHHhChhhh-hcCcc
Q 011596 403 --G---GWMERTTVEDMDIAVRAHLRGWKFIFLN--DVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDII-RAKVY 474 (482)
Q Consensus 403 --G---gf~~~~~~ED~~l~~rl~~~G~ki~~~~--~~~~~~~~p~t~~~~~~qr~RW~~G~~q~~~~~~~~i~-~s~~~ 474 (482)
| ||..++++||+..+++++.+||+.+|++ .....+..|+++.+++.||.||+.|.+|++....+.++ ..+++
T Consensus 823 ~WG~evG~~YGSvTEDv~TGlrLH~rGWrSvY~~p~r~AF~GlAP~~L~d~L~Qr~RWA~G~lQIf~sr~~Pll~~~~Ls 902 (1135)
T PLN02248 823 EWGDRVGWIYGSVTEDVVTGYRMHNRGWRSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLASRRLK 902 (1135)
T ss_pred chhhhcCeeecceechHHHHHHHHhcCCceEeCCCChHhhcCCCCCCHHHHHHHHHHHhhchHHHHhccCCccccCCCCC
Confidence 0 2333457899999999999999999984 44467999999999999999999999999987776655 35788
Q ss_pred hhhcc
Q 011596 475 ILSNT 479 (482)
Q Consensus 475 ~~~k~ 479 (482)
+.||+
T Consensus 903 l~QRL 907 (1135)
T PLN02248 903 FLQRI 907 (1135)
T ss_pred HHHHH
Confidence 88876
|
|
| >PLN02190 cellulose synthase-like protein | Back alignment and domain information |
|---|
Probab=99.90 E-value=1e-22 Score=215.51 Aligned_cols=275 Identities=21% Similarity=0.333 Sum_probs=191.7
Q ss_pred HHHhhcCCCCCCCCCCccccCCCCCCCeEEEEeecCC---ch-HHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHH
Q 011596 195 IRFKRIKPVPKHDDTSDLESGQKGFFPMVLVQIPMCN---EK-EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLI 270 (482)
Q Consensus 195 ~~~~r~~~~~~~~~~~~~~~~~~~~~P~VsViIP~yn---e~-~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~ 270 (482)
....+++|..+.+. ++.....-+++|.|+|.|+++| |+ ..+.+|+.|+++.|||.+++-++|.|||...-|-+.+
T Consensus 68 ~q~~kw~pv~r~~~-p~~l~~r~~~Lp~VDvFV~TaDP~kEPpl~v~nTvLSilA~dYP~eklscYvSDDG~s~LT~~al 146 (756)
T PLN02190 68 ITCIKWSPAEYKPY-PDRLDERVHDLPSVDMFVPTADPVREPPIIVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSL 146 (756)
T ss_pred hccceeeecCCCCC-cHHHHHhhccCCcceEEEecCCCCcCCHHHHHHHHHHHHhccCCccccceEEecCCCcHhHHHHH
Confidence 34456666655432 2222111125899999999999 76 8899999999999999999999999998766555443
Q ss_pred HHH-----------------------------------------------HHHhh----h--------------------
Q 011596 271 KEE-----------------------------------------------VLKWQ----E-------------------- 279 (482)
Q Consensus 271 ~~~-----------------------------------------------~~~~~----~-------------------- 279 (482)
.|. .+++. +
T Consensus 147 ~EAa~FA~~WvPFCrK~~IepRaPe~YF~~~~~~~~~~~f~~e~~~~K~eYee~k~ri~~a~~~~~~~~~~~~~~~~~~~ 226 (756)
T PLN02190 147 KEASKFAKIWVPFCKKYNVRVRAPFRYFLNPPVATEDSEFSKDWEMTKREYEKLSRKVEDATGDSHWLDAEDDFEAFSNT 226 (756)
T ss_pred HHHHHHHhhhcccccccCCCcCCHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHHHhhccCCCCcccCCcccccCCC
Confidence 332 00000 0
Q ss_pred -----------------------CCCeEEEEeccCCCC----CccccHHHHhhhc-ccCCceEEEEEcCCCCC-ChHHHH
Q 011596 280 -----------------------AGANIVYRHRILRDG----YKAGNLKSAMNCS-YVKDYEFVAIFDADFQP-NPDFLR 330 (482)
Q Consensus 280 -----------------------~~v~vv~~~~~~~~g----~Ka~aln~al~~~-~~a~~d~Vl~lDaD~~~-~pd~L~ 330 (482)
.-.+++|+.|+++.| .|+||||..++.+ ...++.||+.+|+|+.. +|+.++
T Consensus 227 ~~~dH~~iiqVll~~~~~~~~~~~lP~LVYvSREKrP~~~Hh~KAGAmNaLlRVSavmtNaP~iLnlDCDmY~Nns~~~r 306 (756)
T PLN02190 227 KPNDHSTIVKVVWENKGGVGDEKEVPHLVYISREKRPNYLHHYKAGAMNFLVRVSGLMTNAPYMLNVDCDMYANEADVVR 306 (756)
T ss_pred CCCCCccceEEEecCCCCccccccCceEEEEeccCCCCCCcccccchhHHHHHHhhhhccCCeEEEecCccccCchhHHH
Confidence 012467777776644 8999999988864 35789999999999966 799999
Q ss_pred HHHHHhhcCC----CeEEEeeeeeeecCCCChHHHHHhhhhhhhhhhhhhhccccccccccccceEeeeHHHHH------
Q 011596 331 RTVPHFKDNE----ELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALE------ 400 (482)
Q Consensus 331 ~lv~~f~~~p----~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~------ 400 (482)
+.+..|.+.+ +++.||.++.+.+...|-...... ......++..+.+ +.|+++++||+++-
T Consensus 307 ~AmCf~ld~~~~~~~~~fVQfPQ~F~D~y~n~~~v~f~-------~~~~GldGlqGP~--YvGTGCffrR~alyG~~p~~ 377 (756)
T PLN02190 307 QAMCIFLQKSKNSNHCAFVQFPQEFYDSNTNELTVLQS-------YLGRGIAGIQGPI--YIGSGCFHTRRVMYGLSSDD 377 (756)
T ss_pred HhhhhhcCCCCCCCeeEEEeCchhhccccCccceEEEE-------EeeccccccCCcc--cccCCcceEeeeecCCCccc
Confidence 9999887432 689999999886443332111111 1112223333222 45666666654432
Q ss_pred ------------------------------------------------------Hc--------------C---CCCCCC
Q 011596 401 ------------------------------------------------------DS--------------G---GWMERT 409 (482)
Q Consensus 401 ------------------------------------------------------~i--------------G---gf~~~~ 409 (482)
+. | ||..++
T Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~fg~s~~f~~s~~~~~~~~~~~~~~~~~~~~eA~~V~sC~YE~~T~WG~evG~~ygS 457 (756)
T PLN02190 378 LEDDGSLSSVATREFLAEDSLAREFGNSKEMVKSVVDALQRKPNPQNSLTNSIEAAQEVGHCHYEYQTSWGNTIGWLYDS 457 (756)
T ss_pred ccccccccccccccccchhhhhhhcCCcHHHHHHHHHHhccCCCCccchHHHHHHHHhhcccCCCCCCchhhccCcccce
Confidence 10 1 455567
Q ss_pred chhHHHHHHHHHHCCCcEEEeccce--ecccCCcCHHHHHHHHHhhhhhhHHHHHHhChhhhh---cCcchhhcc
Q 011596 410 TVEDMDIAVRAHLRGWKFIFLNDVE--CQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIR---AKVYILSNT 479 (482)
Q Consensus 410 ~~ED~~l~~rl~~~G~ki~~~~~~~--~~~~~p~t~~~~~~qr~RW~~G~~q~~~~~~~~i~~---s~~~~~~k~ 479 (482)
++||...+.+++.+||+.+|++... ..+..|+++.+.+.|++||+.|.+|++......++. .++.+.+|+
T Consensus 458 itED~~TGl~mh~rGWrSvY~~p~~~AFlG~aP~~l~~~L~Q~~RWa~G~lqI~fsr~nPl~~g~~~~L~l~QRL 532 (756)
T PLN02190 458 VAEDLNTSIGIHSRGWTSSYISPDPPAFLGSMPPGGPEAMVQQRRWATGLIEVLFNKQSPLIGMFCRKIRFRQRL 532 (756)
T ss_pred eechHHHHHHHHccCCceEecCCCchhhcCcCCCChHHHhhhhhhHhhhhHHHHHhcCCCceeccCCCCCHHHHH
Confidence 8999999999999999999986443 568899999999999999999999998876655543 578887775
|
|
| >cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.9e-22 Score=189.07 Aligned_cols=204 Identities=11% Similarity=0.087 Sum_probs=143.6
Q ss_pred EEeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEecc-CCCCCccccHHHH
Q 011596 225 VQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRI-LRDGYKAGNLKSA 303 (482)
Q Consensus 225 ViIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~-~~~g~Ka~aln~a 303 (482)
|+||+||+++.|++||+|+.+|+||+ .++|+|+||+|+|.+.++++++.++++..+++++..... ..+.|.+.++|.|
T Consensus 1 ViIp~yn~~~~l~~~l~sl~~q~~~~-~~eiiVvDd~S~d~t~~i~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~a~N~g 79 (219)
T cd06913 1 IILPVHNGEQWLDECLESVLQQDFEG-TLELSVFNDASTDKSAEIIEKWRKKLEDSGVIVLVGSHNSPSPKGVGYAKNQA 79 (219)
T ss_pred CEEeecCcHHHHHHHHHHHHhCCCCC-CEEEEEEeCCCCccHHHHHHHHHHhCcccCeEEEEecccCCCCccHHHHHHHH
Confidence 68999999999999999999999984 588999999999999999988777665555655543321 2233588899999
Q ss_pred hhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCC-ChHHHHHhhhhhhhhhhhhhhccccc
Q 011596 304 MNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDE-NLLTRLQDINLSFHFEVEQQVNGVFI 382 (482)
Q Consensus 304 l~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (482)
++ .+++|||+++|+|+.++|+++.+++..+.+++. .++.+.......+. ....++...... .....+.... ..
T Consensus 80 ~~---~a~gd~i~~lD~D~~~~~~~l~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~ 153 (219)
T cd06913 80 IA---QSSGRYLCFLDSDDVMMPQRIRLQYEAALQHPN-SIIGCQVRRIPEDSTERYTRWINTLTR-EQLLTQVYTS-HG 153 (219)
T ss_pred HH---hcCCCEEEEECCCccCChhHHHHHHHHHHhCCC-cEEEEEEEecCcccchhhHHHHHhcCH-HHHHHHHHhh-cC
Confidence 99 689999999999999999999999988876665 34444432222211 111111111000 0000000100 10
Q ss_pred cccccccceEeeeHHHHHHcCCCCCC--CchhHHHHHHHHHHCCCcEEEeccceecc
Q 011596 383 NFFGFNGTAGVWRIKALEDSGGWMER--TTVEDMDIAVRAHLRGWKFIFLNDVECQC 437 (482)
Q Consensus 383 ~~~~~~G~~~~~Rr~~l~~iGgf~~~--~~~ED~~l~~rl~~~G~ki~~~~~~~~~~ 437 (482)
+ +.....+++||++++++|||++. ...||++++.|+.++|+++.+++++..+.
T Consensus 154 ~--~~~~~~~~~rr~~~~~~g~f~~~~~~~~eD~~l~~r~~~~g~~i~~~~~~~~~y 208 (219)
T cd06913 154 P--TVIMPTWFCSREWFSHVGPFDEGGKGVPEDLLFFYEHLRKGGGVYRVDRCLLLY 208 (219)
T ss_pred C--ccccccceeehhHHhhcCCccchhccchhHHHHHHHHHHcCCceEEEcceeeee
Confidence 1 12233467999999999999875 35699999999999999999999988543
|
This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified. |
| >PLN02400 cellulose synthase | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.6e-22 Score=220.20 Aligned_cols=258 Identities=21% Similarity=0.273 Sum_probs=185.9
Q ss_pred CCCCeEEEEeecCCch----HHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHH--------------------
Q 011596 218 GFFPMVLVQIPMCNEK----EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEE-------------------- 273 (482)
Q Consensus 218 ~~~P~VsViIP~yne~----~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~-------------------- 273 (482)
.++|.|+|+|+|-+.. -...+|+-|+++.|||.+++-++|.|||...-|-+.+.|.
T Consensus 353 s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~Al~Eaa~FA~~WvPFCkK~~IepRa 432 (1085)
T PLN02400 353 SQLAPVDVFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGSAMLTFEALSETAEFARKWVPFCKKHNIEPRA 432 (1085)
T ss_pred ccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHHHHHHhhcchhhhcCCCcCC
Confidence 3699999999997654 5888999999999999999999999998655544433321
Q ss_pred -------------------------------------HHHh-------hh------------------------------
Q 011596 274 -------------------------------------VLKW-------QE------------------------------ 279 (482)
Q Consensus 274 -------------------------------------~~~~-------~~------------------------------ 279 (482)
++.. ++
T Consensus 433 Pe~YFs~~~~~~~~~~~~~F~~e~~~mK~eYEe~k~RIe~l~~~~~~~~~~~~~m~dgt~W~g~~~~dHp~iIqVll~~~ 512 (1085)
T PLN02400 433 PEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAKAQKIPEEGWTMQDGTPWPGNNPRDHPGMIQVFLGHS 512 (1085)
T ss_pred HHHHhccCCCcccCCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhccCCccccccccCccCCCCCCCCCchhhhhhhcCC
Confidence 0000 00
Q ss_pred --------CCCeEEEEeccCCCC----CccccHHHHhhhc-ccCCceEEEEEcCCCCC-ChHHHHHHHHHhhc---CCCe
Q 011596 280 --------AGANIVYRHRILRDG----YKAGNLKSAMNCS-YVKDYEFVAIFDADFQP-NPDFLRRTVPHFKD---NEEL 342 (482)
Q Consensus 280 --------~~v~vv~~~~~~~~g----~Ka~aln~al~~~-~~a~~d~Vl~lDaD~~~-~pd~L~~lv~~f~~---~p~v 342 (482)
.-.+++|+.|+++.| .||||||..++.+ ...++.||+.+|+|+.. +|+.+++.+..|.+ .+++
T Consensus 513 ~~~d~~g~~LP~LVYVSREKRP~~~Hh~KAGAMNaLlRVSavmTNaP~ILNlDCDmY~Nns~a~r~AMCf~lD~~~g~~~ 592 (1085)
T PLN02400 513 GGLDTDGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNNSKALKEAMCFMMDPAIGKKT 592 (1085)
T ss_pred CCcccccccCceeEEEeccCCCCCCcchhhhhhHHHHHHhhhhcCCceEEecccccccCCchhHHhhhhheeccCCCcee
Confidence 012578888887755 7999999999864 35789999999999988 89999999998874 2379
Q ss_pred EEEeeeeeeecCCCChHHHHHhhhhhhhhhhhhhhccccccccccccceEeeeHHHHHHc--------------------
Q 011596 343 GLVQARWSFVNKDENLLTRLQDINLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEDS-------------------- 402 (482)
Q Consensus 343 ~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~i-------------------- 402 (482)
+.||.++.+.+.+.+-. ..+....++-......++..+.+ +.|+++++||+++-..
T Consensus 593 afVQFPQrF~gi~~~D~--Y~n~~~vffdi~~~GldGlqGP~--YvGTGC~frR~aLYG~~p~~~~~~~~~~~~~~~~~~ 668 (1085)
T PLN02400 593 CYVQFPQRFDGIDLHDR--YANRNIVFFDINLKGLDGIQGPV--YVGTGCCFNRQALYGYDPVLTEEDLEPNIIVKSCCG 668 (1085)
T ss_pred EEEeCCcccCCCCCCCC--cccceeEEeeccccccccCCCcc--ccccCcceeeeeeccCCCcccccccccccccccccc
Confidence 99999999987655321 11111111111122333333333 4566666666554210
Q ss_pred --------------------------------------------------------------------------------
Q 011596 403 -------------------------------------------------------------------------------- 402 (482)
Q Consensus 403 -------------------------------------------------------------------------------- 402 (482)
T Consensus 669 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~fG~S~~fi~S~~~~~~~~~~~~~ 748 (1085)
T PLN02400 669 SRKKGKGSKKYNIDKKRAMKRTESNVPIFNMEDIEEGVEGYDDERSLLMSQKSLEKRFGQSPVFIAATFMEQGGIPPSTN 748 (1085)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhhhhhccccHHHHHHHHHHhcCCCCCCC
Confidence
Q ss_pred ----------------------C---CCCCCCchhHHHHHHHHHHCCCcEEEec--cceecccCCcCHHHHHHHHHhhhh
Q 011596 403 ----------------------G---GWMERTTVEDMDIAVRAHLRGWKFIFLN--DVECQCELPESYEAYRKQQHRWHS 455 (482)
Q Consensus 403 ----------------------G---gf~~~~~~ED~~l~~rl~~~G~ki~~~~--~~~~~~~~p~t~~~~~~qr~RW~~ 455 (482)
| ||..++++||+..+++++.+||+.+|+. .+...+.+|+++.+++.||.||+.
T Consensus 749 ~~~ll~eA~~V~sC~YE~~T~WG~evGwiYGSvTED~~TG~~LH~rGWrSvY~~p~r~af~GlAP~~l~d~L~Qr~RWA~ 828 (1085)
T PLN02400 749 PATLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWAL 828 (1085)
T ss_pred cHHHHHHHHHhhccCCccCCchhhhhCeeccceechHHHHHHHHccCCceEecCCCcHhhcCcCCCCHHHHHHHHHHHhh
Confidence 1 3444567899999999999999999995 445789999999999999999999
Q ss_pred hhHHHHHHhChhhh---hcCcchhhcc
Q 011596 456 GPMQLFRLCLPDII---RAKVYILSNT 479 (482)
Q Consensus 456 G~~q~~~~~~~~i~---~s~~~~~~k~ 479 (482)
|.+|+++.....++ +.++.+.+|+
T Consensus 829 G~lqI~~sr~nPl~~G~~~~L~l~QRL 855 (1085)
T PLN02400 829 GSIEILLSRHCPIWYGYNGRLKLLERL 855 (1085)
T ss_pred cchheeeccCCccccccCCCCCHHHHH
Confidence 99999997665565 3578888876
|
|
| >PLN02436 cellulose synthase A | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.2e-22 Score=218.41 Aligned_cols=256 Identities=21% Similarity=0.312 Sum_probs=182.3
Q ss_pred CCCCeEEEEeecCCch----HHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHH--------------------
Q 011596 218 GFFPMVLVQIPMCNEK----EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEE-------------------- 273 (482)
Q Consensus 218 ~~~P~VsViIP~yne~----~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~-------------------- 273 (482)
.++|.|+|+|+|-+.. -...+|+-|+++.|||.+++-++|.|||...-|-+.+.|.
T Consensus 362 s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FAk~WvPFCkK~~IepRa 441 (1094)
T PLN02436 362 SELASVDVFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFSIEPRA 441 (1094)
T ss_pred ccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHHHHHHhhcccccccCCCcCC
Confidence 3699999999997654 5888999999999999999999999998655444333221
Q ss_pred -----------------------------------------HHH--------hh-h------------------------
Q 011596 274 -----------------------------------------VLK--------WQ-E------------------------ 279 (482)
Q Consensus 274 -----------------------------------------~~~--------~~-~------------------------ 279 (482)
.++ +. +
T Consensus 442 Pe~YFs~~~~~~~~~~~~~F~~e~~~mKreYEe~K~RIe~l~~~~~~vp~~~~~m~dgt~W~g~~~~dHp~IIqVll~~~ 521 (1094)
T PLN02436 442 PEWYFSQKMDYLKNKVHPAFVRERRAMKREYEEFKVKINALVATAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGHS 521 (1094)
T ss_pred HHHHhhccCCcccccCChhHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhhhhccCccCCCCCCCCCccceEEEecCC
Confidence 010 00 0
Q ss_pred --------CCCeEEEEeccCCCC----CccccHHHHhhhc-ccCCceEEEEEcCCCCC-ChHHHHHHHHHhhcCC----C
Q 011596 280 --------AGANIVYRHRILRDG----YKAGNLKSAMNCS-YVKDYEFVAIFDADFQP-NPDFLRRTVPHFKDNE----E 341 (482)
Q Consensus 280 --------~~v~vv~~~~~~~~g----~Ka~aln~al~~~-~~a~~d~Vl~lDaD~~~-~pd~L~~lv~~f~~~p----~ 341 (482)
.-.+++|+.|+++.| .||||||..++.+ ...++.||+.+|+|+.. +|+.+++.+..|. || +
T Consensus 522 ~~~d~~g~~LP~LVYVSREKRPg~~Hh~KAGAMNaLlRVSavmTNaP~ILNLDCDmYiNns~a~r~AMCfll-D~~~g~~ 600 (1094)
T PLN02436 522 GVRDVEGNELPRLVYVSREKRPGFDHHKKAGAMNSLIRVSAVLSNAPYLLNVDCDHYINNSKALREAMCFMM-DPQSGKK 600 (1094)
T ss_pred CCcccccccCceEEEEecccCCCCCcchhhhhhhhhhhhheeecCCceEEecccccccCchHHHHHhhhhhc-CCccCCe
Confidence 002467777777654 8999999999864 35789999999999955 8999999999987 45 8
Q ss_pred eEEEeeeeeeecCCCCh-HHHHHhhhhhhhhhhhhhhccccccccccccceEeeeHHHHHHc------------------
Q 011596 342 LGLVQARWSFVNKDENL-LTRLQDINLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEDS------------------ 402 (482)
Q Consensus 342 v~~V~~~~~~~n~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~i------------------ 402 (482)
++.||.++.+.+.+.+- +.. ....++-......++..+.+ +.|+++++||+++-..
T Consensus 601 ~afVQFPQrF~gi~k~D~Y~n---~~~vffdi~~~GlDGlqGP~--YvGTGC~frR~aLYG~~pp~~~~~~~~~~~~~~~ 675 (1094)
T PLN02436 601 ICYVQFPQRFDGIDRHDRYSN---RNVVFFDINMKGLDGIQGPI--YVGTGCVFRRQALYGYDAPKKKKPPGKTCNCWPK 675 (1094)
T ss_pred eEEEcCCcccCCCCCCCcccc---cceEeeeccccccccCCCcc--ccccCceeeeeeeeccCCcccccccccccccccc
Confidence 99999999998876532 111 11111111112223333222 4555555555433210
Q ss_pred --------------------------------------------------------------------------------
Q 011596 403 -------------------------------------------------------------------------------- 402 (482)
Q Consensus 403 -------------------------------------------------------------------------------- 402 (482)
T Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~FG~S~~fi~S~~~~~~~~~ 755 (1094)
T PLN02436 676 WCCLCCGSRKKKKKKKSKEKKKKKNREASKQIHALENIEEGIEGSNNEKSSETPQLKLEKKFGQSPVFVASTLLENGGVP 755 (1094)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhHHhhhcccHHHHHHHHHhhcCCC
Confidence
Q ss_pred --------------------------C---CCCCCCchhHHHHHHHHHHCCCcEEEe-ccce-ecccCCcCHHHHHHHHH
Q 011596 403 --------------------------G---GWMERTTVEDMDIAVRAHLRGWKFIFL-NDVE-CQCELPESYEAYRKQQH 451 (482)
Q Consensus 403 --------------------------G---gf~~~~~~ED~~l~~rl~~~G~ki~~~-~~~~-~~~~~p~t~~~~~~qr~ 451 (482)
| ||..++++||+..+++++.+||+.+|+ |+.. ..+..|+++.+++.||.
T Consensus 756 ~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGwiYGSvTEDv~TG~rLH~rGWrSvY~~P~r~AF~GlAP~~L~d~L~Qr~ 835 (1094)
T PLN02436 756 RNASPASLLREAIQVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVL 835 (1094)
T ss_pred CCCCcHHHHHHHHHhhcCCCcccChhhHhhCeeccceecHHHHHHHHHcCCCceEeCCCCchhhcCcCCCCHHHHHHHHH
Confidence 1 344456789999999999999999998 4443 57899999999999999
Q ss_pred hhhhhhHHHHHHhChhhh---hcCcchhhcc
Q 011596 452 RWHSGPMQLFRLCLPDII---RAKVYILSNT 479 (482)
Q Consensus 452 RW~~G~~q~~~~~~~~i~---~s~~~~~~k~ 479 (482)
||+.|.+|++......++ +.++.|.+|+
T Consensus 836 RWA~G~lQIffsr~nPl~~g~~~~L~l~QRL 866 (1094)
T PLN02436 836 RWALGSVEIFLSRHCPIWYGYGGGLKWLERF 866 (1094)
T ss_pred HHhhcceeeeeccCCcchhcccccCCHHHHH
Confidence 999999999987655554 4578888876
|
|
| >cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis | Back alignment and domain information |
|---|
Probab=99.89 E-value=2e-22 Score=186.81 Aligned_cols=192 Identities=19% Similarity=0.247 Sum_probs=146.9
Q ss_pred EEEeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHH
Q 011596 224 LVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSA 303 (482)
Q Consensus 224 sViIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~a 303 (482)
||+||+||+++.+++||.|+.+|++++ ++|+|+||+|+|.+.+++++... . + ++.... .++|++.++|.|
T Consensus 1 sivi~~~n~~~~l~~~l~sl~~q~~~~--~evivvDd~s~d~~~~~~~~~~~----~-~--~~~~~~-~~~g~~~a~n~~ 70 (202)
T cd06433 1 SIITPTYNQAETLEETIDSVLSQTYPN--IEYIVIDGGSTDGTVDIIKKYED----K-I--TYWISE-PDKGIYDAMNKG 70 (202)
T ss_pred CEEEeccchHHHHHHHHHHHHhCCCCC--ceEEEEeCCCCccHHHHHHHhHh----h-c--EEEEec-CCcCHHHHHHHH
Confidence 689999999999999999999999987 78999999999999888876533 1 1 222233 444599999999
Q ss_pred hhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHHHHhhhhhhhhhhhhhhcccccc
Q 011596 304 MNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQQVNGVFIN 383 (482)
Q Consensus 304 l~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (482)
++ .+++|||+++|+|+.+.++++.+++..+..+++.+++.|.....+.+........ . ......... .
T Consensus 71 ~~---~a~~~~v~~ld~D~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~~~~~~~~~~-~---~~~~~~~~~-----~ 138 (202)
T cd06433 71 IA---LATGDIIGFLNSDDTLLPGALLAVVAAFAEHPEVDVVYGDVLLVDENGRVIGRRR-P---PPFLDKFLL-----Y 138 (202)
T ss_pred HH---HcCCCEEEEeCCCcccCchHHHHHHHHHHhCCCccEEEeeeEEEcCCCCcccCCC-C---cchhhhHHh-----h
Confidence 99 5889999999999999999999999777778899999998766544332211110 0 000000111 1
Q ss_pred ccccccceEeeeHHHHHHcCCCCCC-CchhHHHHHHHHHHCCCcEEEeccceecc
Q 011596 384 FFGFNGTAGVWRIKALEDSGGWMER-TTVEDMDIAVRAHLRGWKFIFLNDVECQC 437 (482)
Q Consensus 384 ~~~~~G~~~~~Rr~~l~~iGgf~~~-~~~ED~~l~~rl~~~G~ki~~~~~~~~~~ 437 (482)
...+.++++++|+++++++|+|++. ...||.+++.++..+|+++.+.|.+.+++
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~D~~~~~r~~~~g~~~~~~~~~~~~~ 193 (202)
T cd06433 139 GMPICHQATFFRRSLFEKYGGFDESYRIAADYDLLLRLLLAGKIFKYLPEVLAAF 193 (202)
T ss_pred cCcccCcceEEEHHHHHHhCCCchhhCchhhHHHHHHHHHcCCceEecchhhhhh
Confidence 1125677889999999999999875 56799999999999999999999888643
|
Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families. |
| >PLN02726 dolichyl-phosphate beta-D-mannosyltransferase | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.8e-22 Score=191.28 Aligned_cols=212 Identities=18% Similarity=0.173 Sum_probs=151.0
Q ss_pred CCCeEEEEeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccc
Q 011596 219 FFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAG 298 (482)
Q Consensus 219 ~~P~VsViIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~ 298 (482)
..|+|||+||+|||++.+..+++++.++......++|+|+||+|+|.+.+++++..++++...+ .+...+.+.| ++.
T Consensus 7 ~~~~vsVvIp~yne~~~l~~~l~~l~~~~~~~~~~eiivvDdgS~D~t~~i~~~~~~~~~~~~v--~~~~~~~n~G-~~~ 83 (243)
T PLN02726 7 GAMKYSIIVPTYNERLNIALIVYLIFKALQDVKDFEIIVVDDGSPDGTQDVVKQLQKVYGEDRI--LLRPRPGKLG-LGT 83 (243)
T ss_pred CCceEEEEEccCCchhhHHHHHHHHHHHhccCCCeEEEEEeCCCCCCHHHHHHHHHHhcCCCcE--EEEecCCCCC-HHH
Confidence 4689999999999999999999988764322225899999999999999998887665443333 3333333444 899
Q ss_pred cHHHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCC-C--ChHHHHHhhhhhhhhhhhh
Q 011596 299 NLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKD-E--NLLTRLQDINLSFHFEVEQ 375 (482)
Q Consensus 299 aln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~-~--~~~~~~~~~~~~~~~~~~~ 375 (482)
++|.|++ .+++|||+++|+|+.++|++|.+++..+.+ ++.++|.|.....+.. . .+..+......... . .
T Consensus 84 a~n~g~~---~a~g~~i~~lD~D~~~~~~~l~~l~~~~~~-~~~~~v~g~r~~~~~~~~~~~~~r~~~~~~~~~~--~-~ 156 (243)
T PLN02726 84 AYIHGLK---HASGDFVVIMDADLSHHPKYLPSFIKKQRE-TGADIVTGTRYVKGGGVHGWDLRRKLTSRGANVL--A-Q 156 (243)
T ss_pred HHHHHHH---HcCCCEEEEEcCCCCCCHHHHHHHHHHHHh-cCCcEEEEccccCCCCcCCccHHHHHHHHHHHHH--H-H
Confidence 9999999 689999999999999999999999999874 5778888864333221 1 12222111111100 0 1
Q ss_pred hhccccccccccccceEeeeHHHHHHcCCCCC-CCchhHHHHHHHHHHCCCcEEEeccceecccCCcC
Q 011596 376 QVNGVFINFFGFNGTAGVWRIKALEDSGGWME-RTTVEDMDIAVRAHLRGWKFIFLNDVECQCELPES 442 (482)
Q Consensus 376 ~~~~~~~~~~~~~G~~~~~Rr~~l~~iGgf~~-~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t 442 (482)
.... .......|++.++||+++++++.+.+ ....+|.++.+++..+|+++.++|.....+...+|
T Consensus 157 ~~~~--~~~~d~~g~~~~~rr~~~~~i~~~~~~~~~~~~~el~~~~~~~g~~i~~vp~~~~~r~~g~s 222 (243)
T PLN02726 157 TLLW--PGVSDLTGSFRLYKRSALEDLVSSVVSKGYVFQMEIIVRASRKGYRIEEVPITFVDRVYGES 222 (243)
T ss_pred HHhC--CCCCcCCCcccceeHHHHHHHHhhccCCCcEEehHHHHHHHHcCCcEEEeCcEEeCCCCCcc
Confidence 1111 12223578888999999999975433 35667999999999999999999998876544444
|
|
| >cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.7e-22 Score=188.42 Aligned_cols=199 Identities=18% Similarity=0.131 Sum_probs=147.4
Q ss_pred EEEeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHH
Q 011596 224 LVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSA 303 (482)
Q Consensus 224 sViIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~a 303 (482)
||+||+||+++.+.++|+|+++|+||+ ++|+|+||+|+|.+.+++++...+++ ..+.+.... .+.|+++++|.|
T Consensus 1 sIvIp~yn~~~~l~~~l~sl~~q~~~~--~eiiVvddgS~d~t~~~~~~~~~~~~---~~~~~~~~~-~~~G~~~~~n~g 74 (214)
T cd04196 1 AVLMATYNGEKYLREQLDSILAQTYKN--DELIISDDGSTDGTVEIIKEYIDKDP---FIIILIRNG-KNLGVARNFESL 74 (214)
T ss_pred CEEEEecCcHHHHHHHHHHHHhCcCCC--eEEEEEeCCCCCCcHHHHHHHHhcCC---ceEEEEeCC-CCccHHHHHHHH
Confidence 689999999999999999999999984 78999999999999998887766432 233333333 444599999999
Q ss_pred hhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHHHHhhhhhhhhhhhhhhcccccc
Q 011596 304 MNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQQVNGVFIN 383 (482)
Q Consensus 304 l~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (482)
+. .+++|||+++|+|+.++|++|.+++..+..+++.+++++.....+.+................ ........ .
T Consensus 75 ~~---~~~g~~v~~ld~Dd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~ 148 (214)
T cd04196 75 LQ---AADGDYVFFCDQDDIWLPDKLERLLKAFLKDDKPLLVYSDLELVDENGNPIGESFFEYQKIKP--GTSFNNLL-F 148 (214)
T ss_pred HH---hCCCCEEEEECCCcccChhHHHHHHHHHhcCCCceEEecCcEEECCCCCCcccccccccccCC--ccCHHHHH-H
Confidence 98 689999999999999999999999999766788899998866554433221111100000000 00000000 1
Q ss_pred ccccccceEeeeHHHHHHcCCCCCC-CchhHHHHHHHHHHCCCcEEEecccee
Q 011596 384 FFGFNGTAGVWRIKALEDSGGWMER-TTVEDMDIAVRAHLRGWKFIFLNDVEC 435 (482)
Q Consensus 384 ~~~~~G~~~~~Rr~~l~~iGgf~~~-~~~ED~~l~~rl~~~G~ki~~~~~~~~ 435 (482)
...+.|+++++|+++++++|+|++. ...||.++..++.. |+++.+++++.+
T Consensus 149 ~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~-~~~~~~~~~~~~ 200 (214)
T cd04196 149 QNVVTGCTMAFNRELLELALPFPDADVIMHDWWLALLASA-FGKVVFLDEPLI 200 (214)
T ss_pred hCccCCceeeEEHHHHHhhccccccccccchHHHHHHHHH-cCceEEcchhHH
Confidence 1125788999999999999999887 67899999998877 668999998764
|
GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families. |
| >cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.1e-21 Score=183.45 Aligned_cols=176 Identities=16% Similarity=0.168 Sum_probs=143.2
Q ss_pred EEeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHh
Q 011596 225 VQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAM 304 (482)
Q Consensus 225 ViIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al 304 (482)
|+||+||+++.+++||+|+++|++|+ .+|+|+||+|+|.+.+++++..+. ..+.+...+.+.| .+.++|.|+
T Consensus 1 viI~~~n~~~~l~~~l~sl~~q~~~~--~eiiivD~~s~d~t~~~~~~~~~~-----~~i~~~~~~~n~g-~~~~~n~~~ 72 (202)
T cd04185 1 AVVVTYNRLDLLKECLDALLAQTRPP--DHIIVIDNASTDGTAEWLTSLGDL-----DNIVYLRLPENLG-GAGGFYEGV 72 (202)
T ss_pred CEEEeeCCHHHHHHHHHHHHhccCCC--ceEEEEECCCCcchHHHHHHhcCC-----CceEEEECccccc-hhhHHHHHH
Confidence 68999999999999999999999986 468999999999998888765432 2234444455555 788888888
Q ss_pred hhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHHHHhhhhhhhhhhhhhhccccccc
Q 011596 305 NCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQQVNGVFINF 384 (482)
Q Consensus 305 ~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (482)
+.+..+++||++++|+|+.++|+++++++..+. +++++++.+.....+.
T Consensus 73 ~~a~~~~~d~v~~ld~D~~~~~~~l~~l~~~~~-~~~~~~~~~~~~~~~~------------------------------ 121 (202)
T cd04185 73 RRAYELGYDWIWLMDDDAIPDPDALEKLLAYAD-KDNPQFLAPLVLDPDG------------------------------ 121 (202)
T ss_pred HHHhccCCCEEEEeCCCCCcChHHHHHHHHHHh-cCCceEecceeEcCCC------------------------------
Confidence 854446899999999999999999999999998 6888888776433221
Q ss_pred cccccceEeeeHHHHHHcCCCCCC--CchhHHHHHHHHHHCCCcEEEeccceecccCCcCH
Q 011596 385 FGFNGTAGVWRIKALEDSGGWMER--TTVEDMDIAVRAHLRGWKFIFLNDVECQCELPESY 443 (482)
Q Consensus 385 ~~~~G~~~~~Rr~~l~~iGgf~~~--~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~ 443 (482)
.++++++|+++++++|+|++. ...||.+++.++...|+++ ++|++.+++..+.+.
T Consensus 122 ---~~~~~~~~~~~~~~~g~~~~~~~~~~eD~~~~~r~~~~G~~i-~~~~~~~~h~~~~~~ 178 (202)
T cd04185 122 ---SFVGVLISRRVVEKIGLPDKEFFIWGDDTEYTLRASKAGPGI-YVPDAVVVHKTAINK 178 (202)
T ss_pred ---ceEEEEEeHHHHHHhCCCChhhhccchHHHHHHHHHHcCCcE-EecceEEEEcccccc
Confidence 235678999999999988765 4579999999999999999 999999888776553
|
GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families. |
| >PLN02915 cellulose synthase A [UDP-forming], catalytic subunit | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.2e-21 Score=212.74 Aligned_cols=256 Identities=23% Similarity=0.312 Sum_probs=178.4
Q ss_pred CCCeEEEEeecCCch----HHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHH---------------------
Q 011596 219 FFPMVLVQIPMCNEK----EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEE--------------------- 273 (482)
Q Consensus 219 ~~P~VsViIP~yne~----~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~--------------------- 273 (482)
++|.|+|.|+|-+.. -...+|+-|+++.|||.+++-++|.|||...-|-+.+.|.
T Consensus 285 ~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FAk~WvPFCkK~~IepRaP 364 (1044)
T PLN02915 285 RLAPVDVFVSTVDPLKEPPIITANTVLSILAVDYPVDKVSCYVSDDGASMLLFDTLSETAEFARRWVPFCKKHNIEPRAP 364 (1044)
T ss_pred cCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceeEEEecCCchHhHHHHHHHHHHHHHhhcchhhhcCCCcCCH
Confidence 599999999997654 5888999999999999999999999998655544433321
Q ss_pred ----------------------------------------HHH---hhh-------------------------------
Q 011596 274 ----------------------------------------VLK---WQE------------------------------- 279 (482)
Q Consensus 274 ----------------------------------------~~~---~~~------------------------------- 279 (482)
.++ .++
T Consensus 365 e~YFs~~~~~~~~~~~~~F~~e~~~mKreYEe~K~RIe~l~~~~~~~~~~~~~m~dgt~W~g~~~~dHp~IIqVll~~~~ 444 (1044)
T PLN02915 365 EFYFSQKIDYLKDKVQPTFVKERRAMKREYEEFKVRINALVAKAQKKPEEGWVMQDGTPWPGNNTRDHPGMIQVYLGSEG 444 (1044)
T ss_pred HHHhccCCCccccccCchhHHHHHHHHHHHHHHHHHHHHHHhhhccCCcccccccCCccCCCCCCCCCccceEEeecCCC
Confidence 000 000
Q ss_pred -------CCCeEEEEeccCCCC----CccccHHHHhhhc-ccCCceEEEEEcCCCCC-ChHHHHHHHHHhhc---CCCeE
Q 011596 280 -------AGANIVYRHRILRDG----YKAGNLKSAMNCS-YVKDYEFVAIFDADFQP-NPDFLRRTVPHFKD---NEELG 343 (482)
Q Consensus 280 -------~~v~vv~~~~~~~~g----~Ka~aln~al~~~-~~a~~d~Vl~lDaD~~~-~pd~L~~lv~~f~~---~p~v~ 343 (482)
.-.+++|+.|+++.| .||||||..++.+ ...++.||+.+|+|+.. +|+.+++.+-.|.+ .++++
T Consensus 445 ~~d~~g~~lP~LVYVSREKRP~~~Hh~KAGAMNaLlRVSavmTNaP~iLNlDCDmY~Nns~a~r~AMCf~lD~~~g~~~a 524 (1044)
T PLN02915 445 ALDVEGKELPRLVYVSREKRPGYNHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYINNSKAVREAMCFLMDPQLGKKLC 524 (1044)
T ss_pred CcccccCccceeEEEecccCCCCCcchhhhhhhhHhhhhheeecCcEEEeeccccccCcchhhHhhceeeecCCCCCeeE
Confidence 002477877777655 7999999998863 45689999999999977 78999999988873 23799
Q ss_pred EEeeeeeeecCCCCh-HHHHHhhhhhhhhhhhhhhccccccccccccceEeeeHHHH-----------------------
Q 011596 344 LVQARWSFVNKDENL-LTRLQDINLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKAL----------------------- 399 (482)
Q Consensus 344 ~V~~~~~~~n~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l----------------------- 399 (482)
.||.++.+.+.+.+- +.. .+..++-......++..+.+ +.|+++++||+++
T Consensus 525 fVQFPQrF~gidk~D~Y~n---~~~Vffdi~~~GldGlqGP~--YvGTGCffrR~aLYG~~pp~~~~~~~~~~~~~~~~~ 599 (1044)
T PLN02915 525 YVQFPQRFDGIDRHDRYAN---RNVVFFDINMKGLDGIQGPV--YVGTGCVFNRQALYGYDPPVSEKRPKMTCDCWPSWC 599 (1044)
T ss_pred EEeCCcccCCCCCCCCcCc---cceEEEeeecccccccCCcc--cccCCceeeeeeecCcCCcccccccccccccccccc
Confidence 999999988765431 111 00000000011111221111 2333333333221
Q ss_pred --------------------------------------------------------------------------------
Q 011596 400 -------------------------------------------------------------------------------- 399 (482)
Q Consensus 400 -------------------------------------------------------------------------------- 399 (482)
T Consensus 600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (1044)
T PLN02915 600 CCCCGGGRRGKSKKSKKGKKGRRSLLGGLKKRKKKGGGGGSMMGKKYGRKKSQAVFDLEEIEEGLEGYDELEKSSLMSQK 679 (1044)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhh
Confidence
Q ss_pred ---------------------------------HHc--------------C---CCCCCCchhHHHHHHHHHHCCCcEEE
Q 011596 400 ---------------------------------EDS--------------G---GWMERTTVEDMDIAVRAHLRGWKFIF 429 (482)
Q Consensus 400 ---------------------------------~~i--------------G---gf~~~~~~ED~~l~~rl~~~G~ki~~ 429 (482)
++. | ||..++++||+..+++++.+||+.+|
T Consensus 680 ~~~~~fG~S~~fi~S~~~~~~~~~~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTEDv~TG~rLH~rGWrSvY 759 (1044)
T PLN02915 680 NFEKRFGQSPVFIASTLMEDGGLPEGTNPAALIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWKSVY 759 (1044)
T ss_pred hhhhhcCCcHHHHHHHHHhhcCCCCCCCcHHHHHHHHhccccCCCccCchhHhhCccccccccHHHHHHHHHccCCcEEe
Confidence 110 1 35556789999999999999999999
Q ss_pred ecc--ceecccCCcCHHHHHHHHHhhhhhhHHHHHHhChhhh---hcCcchhhcc
Q 011596 430 LND--VECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDII---RAKVYILSNT 479 (482)
Q Consensus 430 ~~~--~~~~~~~p~t~~~~~~qr~RW~~G~~q~~~~~~~~i~---~s~~~~~~k~ 479 (482)
++. +...+.+|+++.+++.||.||+.|.+|+++.....++ ..++++.+|+
T Consensus 760 ~~p~r~AF~GlAP~~L~d~L~Qr~RWA~G~lqIf~sr~~Pl~~g~~~~L~l~QRL 814 (1044)
T PLN02915 760 CMPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFMSRHCPLWYAYGGKLKWLERL 814 (1044)
T ss_pred eCCCcHHhcCcCCCCHHHHHHHHHHHhhhHHHHHHhccCCcccccCCCCCHHHHH
Confidence 953 3457999999999999999999999999997765555 3578888876
|
|
| >cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.5e-22 Score=189.88 Aligned_cols=202 Identities=18% Similarity=0.214 Sum_probs=140.7
Q ss_pred EEeecCCch-HHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHH
Q 011596 225 VQIPMCNEK-EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSA 303 (482)
Q Consensus 225 ViIP~yne~-~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~a 303 (482)
++||+||++ +.+.+||+|+.+|. .+|+|+||++++++....+. ...++ .+...+.+.| +++++|.|
T Consensus 1 ~vI~~yn~~~~~l~~~l~sl~~q~-----~~iivvDn~s~~~~~~~~~~-----~~~~i--~~i~~~~n~G-~~~a~N~g 67 (237)
T cd02526 1 AVVVTYNPDLSKLKELLAALAEQV-----DKVVVVDNSSGNDIELRLRL-----NSEKI--ELIHLGENLG-IAKALNIG 67 (237)
T ss_pred CEEEEecCCHHHHHHHHHHHhccC-----CEEEEEeCCCCccHHHHhhc-----cCCcE--EEEECCCcee-hHHhhhHH
Confidence 589999999 99999999999982 46889999999887654432 12333 3444444555 99999999
Q ss_pred hhhcccCCceEEEEEcCCCCCChHHHHHHH---HHhhcCCCeEEEeeeeeeecCCCChHHHHHhhhhhhhhhhhhhhccc
Q 011596 304 MNCSYVKDYEFVAIFDADFQPNPDFLRRTV---PHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQQVNGV 380 (482)
Q Consensus 304 l~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv---~~f~~~p~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (482)
++.+...++|||+++|+|+.++|++|.+++ ..+..+++++++++.....+.... ........+.. ...... ...
T Consensus 68 ~~~a~~~~~d~v~~lD~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~-~~~ 144 (237)
T cd02526 68 IKAALENGADYVLLFDQDSVPPPDMVEKLLAYKILSDKNSNIGAVGPRIIDRRTGEN-SPGVRKSGYKL-RIQKEG-EEG 144 (237)
T ss_pred HHHHHhCCCCEEEEECCCCCcCHhHHHHHHHHHHhhccCCCeEEEeeeEEcCCCCee-ccceeccCccc-eecccc-cCC
Confidence 994322245999999999999999999995 555567888877765443332211 11111111100 000000 011
Q ss_pred cccccccccceEeeeHHHHHHcCCCCCCCc--hhHHHHHHHHHHCCCcEEEeccceecccCCcC
Q 011596 381 FINFFGFNGTAGVWRIKALEDSGGWMERTT--VEDMDIAVRAHLRGWKFIFLNDVECQCELPES 442 (482)
Q Consensus 381 ~~~~~~~~G~~~~~Rr~~l~~iGgf~~~~~--~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t 442 (482)
........|+++++||++++++|||++... .||.+++.|+.++|+++.++|++.+++..+.+
T Consensus 145 ~~~~~~~~~~~~~~rr~~~~~~ggfd~~~~~~~eD~d~~~r~~~~G~~~~~~~~~~v~h~~~~~ 208 (237)
T cd02526 145 LKEVDFLITSGSLISLEALEKVGGFDEDLFIDYVDTEWCLRARSKGYKIYVVPDAVLKHELGDK 208 (237)
T ss_pred ceEeeeeeccceEEcHHHHHHhCCCCHHHcCccchHHHHHHHHHcCCcEEEEcCeEEEecccCc
Confidence 111222467888999999999999988643 58999999999999999999999998877665
|
Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen. |
| >cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.3e-21 Score=175.98 Aligned_cols=176 Identities=21% Similarity=0.185 Sum_probs=134.5
Q ss_pred EEeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHh
Q 011596 225 VQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAM 304 (482)
Q Consensus 225 ViIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al 304 (482)
|+||+||+++.+++||+|+.+|+|++ ++|+|+||+|++.+.+++++..+. .+.+++...+.+...++++++|.|+
T Consensus 1 ivip~~n~~~~l~~~l~sl~~q~~~~--~eiivvdd~s~d~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~n~g~ 75 (182)
T cd06420 1 LIITTYNRPEALELVLKSVLNQSILP--FEVIIADDGSTEETKELIEEFKSQ---FPIPIKHVWQEDEGFRKAKIRNKAI 75 (182)
T ss_pred CEEeecCChHHHHHHHHHHHhccCCC--CEEEEEeCCCchhHHHHHHHHHhh---cCCceEEEEcCCcchhHHHHHHHHH
Confidence 68999999999999999999999886 678999999999998888766542 2233333333333335888999999
Q ss_pred hhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHHHHhhhhhhhhhhhhhhccccccc
Q 011596 305 NCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQQVNGVFINF 384 (482)
Q Consensus 305 ~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (482)
+ .+++|||+++|+|+.++|++|++++..+ ++++.++++... .+.....
T Consensus 76 ~---~a~g~~i~~lD~D~~~~~~~l~~~~~~~--~~~~~v~g~~~~-~~~~~~~-------------------------- 123 (182)
T cd06420 76 A---AAKGDYLIFIDGDCIPHPDFIADHIELA--EPGVFLSGSRVL-LNEKLTE-------------------------- 123 (182)
T ss_pred H---HhcCCEEEEEcCCcccCHHHHHHHHHHh--CCCcEEecceee-cccccce--------------------------
Confidence 9 6899999999999999999999999988 366655544433 2221110
Q ss_pred cccccceEeeeHHHHHHcCCCCCCCc---hhHHHHHHHHHHCCCcEEEec-cceecc
Q 011596 385 FGFNGTAGVWRIKALEDSGGWMERTT---VEDMDIAVRAHLRGWKFIFLN-DVECQC 437 (482)
Q Consensus 385 ~~~~G~~~~~Rr~~l~~iGgf~~~~~---~ED~~l~~rl~~~G~ki~~~~-~~~~~~ 437 (482)
....|++++++|+.+.++|||++... .||.+++.|+.++|++...+. ++.+++
T Consensus 124 ~~~~~~~~~~~r~~~~~~ggf~~~~~~~~~eD~~l~~r~~~~g~~~~~~~~~~~~~h 180 (182)
T cd06420 124 RGIRGCNMSFWKKDLLAVNGFDEEFTGWGGEDSELVARLLNSGIKFRKLKFAAIVFH 180 (182)
T ss_pred eEeccceEEEEHHHHHHhCCCCcccccCCcchHHHHHHHHHcCCcEEEecccceeee
Confidence 12567888899999999999988633 699999999999996666554 665554
|
Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm |
| >cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.7e-21 Score=173.64 Aligned_cols=163 Identities=17% Similarity=0.286 Sum_probs=138.8
Q ss_pred EEeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHh
Q 011596 225 VQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAM 304 (482)
Q Consensus 225 ViIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al 304 (482)
|+||+||+.+.+.++++|+.+|+++. .+|+|+||++++.+.+.+++.. . ++.+...+.+. |++.++|.|+
T Consensus 1 vii~~~~~~~~l~~~l~sl~~~~~~~--~~iiivdd~s~~~~~~~~~~~~-----~--~~~~~~~~~~~-g~~~a~n~~~ 70 (166)
T cd04186 1 IIIVNYNSLEYLKACLDSLLAQTYPD--FEVIVVDNASTDGSVELLRELF-----P--EVRLIRNGENL-GFGAGNNQGI 70 (166)
T ss_pred CEEEecCCHHHHHHHHHHHHhccCCC--eEEEEEECCCCchHHHHHHHhC-----C--CeEEEecCCCc-ChHHHhhHHH
Confidence 68999999999999999999999855 6789999999998877766431 1 23333333444 4999999999
Q ss_pred hhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHHHHhhhhhhhhhhhhhhccccccc
Q 011596 305 NCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQQVNGVFINF 384 (482)
Q Consensus 305 ~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (482)
+ .+++|+++++|+|+.++|+++.+++..+..+++++++++.
T Consensus 71 ~---~~~~~~i~~~D~D~~~~~~~l~~~~~~~~~~~~~~~~~~~------------------------------------ 111 (166)
T cd04186 71 R---EAKGDYVLLLNPDTVVEPGALLELLDAAEQDPDVGIVGPK------------------------------------ 111 (166)
T ss_pred h---hCCCCEEEEECCCcEECccHHHHHHHHHHhCCCceEEEcc------------------------------------
Confidence 9 5799999999999999999999999988888898888776
Q ss_pred cccccceEeeeHHHHHHcCCCCCC--CchhHHHHHHHHHHCCCcEEEeccceeccc
Q 011596 385 FGFNGTAGVWRIKALEDSGGWMER--TTVEDMDIAVRAHLRGWKFIFLNDVECQCE 438 (482)
Q Consensus 385 ~~~~G~~~~~Rr~~l~~iGgf~~~--~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~ 438 (482)
+.|+++++|+++++++|+|++. ...||.++..++..+|+++.+.|++.+++.
T Consensus 112 --~~~~~~~~~~~~~~~~~~~~~~~~~~~eD~~~~~~~~~~g~~i~~~~~~~~~h~ 165 (166)
T cd04186 112 --VSGAFLLVRREVFEEVGGFDEDFFLYYEDVDLCLRARLAGYRVLYVPQAVIYHH 165 (166)
T ss_pred --CceeeEeeeHHHHHHcCCCChhhhccccHHHHHHHHHHcCCeEEEccceEEEec
Confidence 4689999999999999999876 356999999999999999999999987764
|
GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families. |
| >PRK10018 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.2e-21 Score=188.40 Aligned_cols=206 Identities=13% Similarity=0.113 Sum_probs=139.8
Q ss_pred CCCeEEEEeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccc
Q 011596 219 FFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAG 298 (482)
Q Consensus 219 ~~P~VsViIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~ 298 (482)
..|.|||+||+||+++.+.+||+|+++|+||+ +||+|+||+|++ .+.+++..+++.+. ++.+...+.+ +|.+.
T Consensus 3 ~~p~VSVIip~yN~~~~l~~~l~Svl~Qt~~~--~EiIVVDDgS~~--~~~~~~~~~~~~~~--ri~~i~~~~n-~G~~~ 75 (279)
T PRK10018 3 DNPLISIYMPTWNRQQLAIRAIKSVLRQDYSN--WEMIIVDDCSTS--WEQLQQYVTALNDP--RITYIHNDIN-SGACA 75 (279)
T ss_pred CCCEEEEEEEeCCCHHHHHHHHHHHHhCCCCC--eEEEEEECCCCC--HHHHHHHHHHcCCC--CEEEEECCCC-CCHHH
Confidence 46899999999999999999999999999987 789999999873 33455555443333 4444444444 45999
Q ss_pred cHHHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHHHHhhhh--hhhhhhhhh
Q 011596 299 NLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINL--SFHFEVEQQ 376 (482)
Q Consensus 299 aln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~~~~~~~--~~~~~~~~~ 376 (482)
++|.|++ .++||||+++|+|+.++|+.|++++..+...+..+++.+...... +.. ......... .........
T Consensus 76 a~N~gi~---~a~g~~I~~lDaDD~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~p~~~~~~~~~ 150 (279)
T PRK10018 76 VRNQAIM---LAQGEYITGIDDDDEWTPNRLSVFLAHKQQLVTHAFLYANDYVCQ-GEV-YSQPASLPLYPKSPYSRRLF 150 (279)
T ss_pred HHHHHHH---HcCCCEEEEECCCCCCCccHHHHHHHHHHhCCCccEEEccceeec-Ccc-cccccccCCCCCCCCCHHHH
Confidence 9999999 689999999999999999999999999876566666665532211 110 000000000 000000000
Q ss_pred hccccccccccccceEeeeHHHHHHcCCCCCC-CchhHHHHHHHHHHCCCcEEEeccce-ecccCCcCH
Q 011596 377 VNGVFINFFGFNGTAGVWRIKALEDSGGWMER-TTVEDMDIAVRAHLRGWKFIFLNDVE-CQCELPESY 443 (482)
Q Consensus 377 ~~~~~~~~~~~~G~~~~~Rr~~l~~iGgf~~~-~~~ED~~l~~rl~~~G~ki~~~~~~~-~~~~~p~t~ 443 (482)
.. .++.|+..+.++..+.+ ++|++. ...||+++++|+..+|+....+|++. .++..+.+.
T Consensus 151 ~~------~n~ig~~~~~~~~~~~~-~~fd~~~~~~eDydlwlrl~~~~~~~~~~~~~l~~y~~~~~s~ 212 (279)
T PRK10018 151 YK------RNIIGNQVFTWAWRFKE-CLFDTELKAAQDYDIFLRMVVEYGEPWKVEEATQILHINHGEM 212 (279)
T ss_pred HH------hcCcCceeeehhhhhhh-cccCCCCCccccHHHHHHHHHhcCceEeeccceEEEEcCCCCc
Confidence 00 11346666666666655 578665 56899999999999999999999885 344434443
|
|
| >cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function | Back alignment and domain information |
|---|
Probab=99.87 E-value=1e-20 Score=178.96 Aligned_cols=185 Identities=17% Similarity=0.219 Sum_probs=134.0
Q ss_pred EEEEeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHH
Q 011596 223 VLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKS 302 (482)
Q Consensus 223 VsViIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~ 302 (482)
|||+||+||+++.+.++|+|+++|+|++ ++|+|+||+++|.+.+++++ . .+.+.. .+. +++.++|.
T Consensus 1 vsvii~~~n~~~~l~~~l~sl~~q~~~~--~evivvdd~s~d~~~~~~~~-------~--~~~~~~--~~~-g~~~a~n~ 66 (221)
T cd02522 1 LSIIIPTLNEAENLPRLLASLRRLNPLP--LEIIVVDGGSTDGTVAIARS-------A--GVVVIS--SPK-GRARQMNA 66 (221)
T ss_pred CEEEEEccCcHHHHHHHHHHHHhccCCC--cEEEEEeCCCCccHHHHHhc-------C--CeEEEe--CCc-CHHHHHHH
Confidence 6899999999999999999999999855 67899999999998877653 2 233332 233 48899999
Q ss_pred HhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHHHHhhhhhhhhhhhhhhccccc
Q 011596 303 AMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQQVNGVFI 382 (482)
Q Consensus 303 al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (482)
|++ .+++|+|+++|+|+.++|+++++++..+.. +...+........+.. ........... .....
T Consensus 67 g~~---~a~~~~i~~~D~D~~~~~~~l~~l~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~--------~~~~~- 131 (221)
T cd02522 67 GAA---AARGDWLLFLHADTRLPPDWDAAIIETLRA-DGAVAGAFRLRFDDPG--PRLRLLELGAN--------LRSRL- 131 (221)
T ss_pred HHH---hccCCEEEEEcCCCCCChhHHHHHHHHhhc-CCcEEEEEEeeecCCc--cchhhhhhccc--------ceecc-
Confidence 999 578999999999999999999999887764 4444444333333222 11111110000 00000
Q ss_pred cccccccceEeeeHHHHHHcCCCCCCCchhHHHHHHHHHHCCCcEEEeccceecc
Q 011596 383 NFFGFNGTAGVWRIKALEDSGGWMERTTVEDMDIAVRAHLRGWKFIFLNDVECQC 437 (482)
Q Consensus 383 ~~~~~~G~~~~~Rr~~l~~iGgf~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~ 437 (482)
....+.+.++++|+++++++|||++....||++++.++...|+++.+ |...+.+
T Consensus 132 ~~~~~~~~~~~~r~~~~~~~G~fd~~~~~ED~d~~~r~~~~G~~~~~-~~~~~~~ 185 (221)
T cd02522 132 FGLPYGDQGLFIRRELFEELGGFPELPLMEDVELVRRLRRRGRPALL-PSPVTTS 185 (221)
T ss_pred cCCCcCCceEEEEHHHHHHhCCCCccccccHHHHHHHHHhCCCEEEc-Cceeeec
Confidence 11124566899999999999999998889999999999999998877 6555443
|
Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families. |
| >cd06423 CESA_like CESA_like is the cellulose synthase superfamily | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.2e-21 Score=176.19 Aligned_cols=180 Identities=31% Similarity=0.474 Sum_probs=133.9
Q ss_pred EEeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHh
Q 011596 225 VQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAM 304 (482)
Q Consensus 225 ViIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al 304 (482)
|+||+||+++.+.+||+|+++|++++ ++|+|+||++++.+.+.+++..... ...+.+....++ .|++.++|.|+
T Consensus 1 Viip~~n~~~~l~~~l~sl~~q~~~~--~~iivvdd~s~d~t~~~~~~~~~~~---~~~~~~~~~~~~-~g~~~~~n~~~ 74 (180)
T cd06423 1 IIVPAYNEEAVIERTIESLLALDYPK--LEVIVVDDGSTDDTLEILEELAALY---IRRVLVVRDKEN-GGKAGALNAGL 74 (180)
T ss_pred CeecccChHHHHHHHHHHHHhCCCCc--eEEEEEeCCCccchHHHHHHHhccc---cceEEEEEeccc-CCchHHHHHHH
Confidence 68999999999999999999999965 6789999999999988777654422 123344434444 45999999999
Q ss_pred hhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHHHHhhhhhhhhhhhhhhccccccc
Q 011596 305 NCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQQVNGVFINF 384 (482)
Q Consensus 305 ~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (482)
+ .+++|||+++|+|+.++|+++++++..+..+++++++++.........++........+.................
T Consensus 75 ~---~~~~~~i~~~D~D~~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (180)
T cd06423 75 R---HAKGDIVVVLDADTILEPDALKRLVVPFFADPKVGAVQGRVRVRNGSENLLTRLQAIEYLSIFRLGRRAQSALGGV 151 (180)
T ss_pred H---hcCCCEEEEECCCCCcChHHHHHHHHHhccCCCeeeEeeeEEEecCcCcceeccchheecceeeeeeehhheecce
Confidence 9 5799999999999999999999997777778999999998877665434433333222221111111111122234
Q ss_pred cccccceEeeeHHHHHHcCCCCCCCchhH
Q 011596 385 FGFNGTAGVWRIKALEDSGGWMERTTVED 413 (482)
Q Consensus 385 ~~~~G~~~~~Rr~~l~~iGgf~~~~~~ED 413 (482)
..+.|+++++|+++++++|||++..+.||
T Consensus 152 ~~~~g~~~~~~~~~~~~~ggf~~~~~~eD 180 (180)
T cd06423 152 LVLSGAFGAFRREALREVGGWDEDTLTED 180 (180)
T ss_pred eecCchHHHHHHHHHHHhCCccccCcCCC
Confidence 45789999999999999999999988887
|
The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the |
| >cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1 | Back alignment and domain information |
|---|
Probab=99.86 E-value=1e-20 Score=179.39 Aligned_cols=202 Identities=14% Similarity=0.119 Sum_probs=143.7
Q ss_pred EEeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHh
Q 011596 225 VQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAM 304 (482)
Q Consensus 225 ViIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al 304 (482)
|+||+||+++.|.++|+|+.+|.+ ...++|+||||+|+|.+.++++++.+..+ .+ .+.... .++|++.++|.|+
T Consensus 1 ViIp~yn~~~~l~~~l~sl~~q~~-~~~~eiiiVDd~S~d~t~~~~~~~~~~~~--~i--~~~~~~-~n~G~~~a~n~g~ 74 (224)
T cd06442 1 IIIPTYNERENIPELIERLDAALK-GIDYEIIVVDDNSPDGTAEIVRELAKEYP--RV--RLIVRP-GKRGLGSAYIEGF 74 (224)
T ss_pred CeEeccchhhhHHHHHHHHHHhhc-CCCeEEEEEeCCCCCChHHHHHHHHHhCC--ce--EEEecC-CCCChHHHHHHHH
Confidence 689999999999999999999998 23488999999999999888877655322 23 333333 4445999999999
Q ss_pred hhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCC-CCh--HHHHHhhhhhhhhhhhhhhcccc
Q 011596 305 NCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKD-ENL--LTRLQDINLSFHFEVEQQVNGVF 381 (482)
Q Consensus 305 ~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~ 381 (482)
+ .+.+|||+++|+|+.++|++|..++..+.. ++.++|.|........ .++ ..+...... ....... ..
T Consensus 75 ~---~a~gd~i~~lD~D~~~~~~~l~~l~~~~~~-~~~~~v~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~--~~ 145 (224)
T cd06442 75 K---AARGDVIVVMDADLSHPPEYIPELLEAQLE-GGADLVIGSRYVEGGGVEGWGLKRKLISRGA---NLLARLL--LG 145 (224)
T ss_pred H---HcCCCEEEEEECCCCCCHHHHHHHHHHHhc-CCCCEEEEeeeecCCccCCCcHHHHHHHHHH---HHHHHHH--cC
Confidence 9 688999999999999999999999999764 5566776654333221 111 111111000 0011111 11
Q ss_pred ccccccccceEeeeHHHHHHcC-CCCCCCchhHHHHHHHHHHCCCcEEEeccceecccCCc
Q 011596 382 INFFGFNGTAGVWRIKALEDSG-GWMERTTVEDMDIAVRAHLRGWKFIFLNDVECQCELPE 441 (482)
Q Consensus 382 ~~~~~~~G~~~~~Rr~~l~~iG-gf~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~ 441 (482)
.......|+++++||++++++| ++......+|.++..++.+.|+++.++|.....+....
T Consensus 146 ~~~~~~~~~~~~~~r~~~~~ig~~~~~~~~~~~~~l~~~~~~~g~~i~~~p~~~~~~~~g~ 206 (224)
T cd06442 146 RKVSDPTSGFRAYRREVLEKLIDSLVSKGYKFQLELLVRARRLGYRIVEVPITFVDREHGE 206 (224)
T ss_pred CCCCCCCCccchhhHHHHHHHhhhccCCCcEEeHHHHHHHHHcCCeEEEeCeEEeccCCCc
Confidence 1223357888899999999998 56555667788999999999999999998876654443
|
Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, |
| >PRK10073 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=6.2e-21 Score=191.96 Aligned_cols=201 Identities=13% Similarity=0.168 Sum_probs=141.3
Q ss_pred CCCeEEEEeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccc
Q 011596 219 FFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAG 298 (482)
Q Consensus 219 ~~P~VsViIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~ 298 (482)
..|.|||+||+||+++.+++||+|+++|+|++ +||+|+||||+|.+.+++++..++. ..++ +.+ .+ ++|.+.
T Consensus 4 ~~p~vSVIIP~yN~~~~L~~~l~Sl~~Qt~~~--~EIIiVdDgStD~t~~i~~~~~~~~--~~i~--vi~-~~-n~G~~~ 75 (328)
T PRK10073 4 STPKLSIIIPLYNAGKDFRAFMESLIAQTWTA--LEIIIVNDGSTDNSVEIAKHYAENY--PHVR--LLH-QA-NAGVSV 75 (328)
T ss_pred CCCeEEEEEeccCCHHHHHHHHHHHHhCCCCC--eEEEEEeCCCCccHHHHHHHHHhhC--CCEE--EEE-CC-CCChHH
Confidence 35889999999999999999999999999986 7899999999999999888776643 2344 333 33 455999
Q ss_pred cHHHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHH------HHHhhhh-hhhh
Q 011596 299 NLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLT------RLQDINL-SFHF 371 (482)
Q Consensus 299 aln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~------~~~~~~~-~~~~ 371 (482)
+.|.|++ .++||||+|+|+|+.++|+++++++..+++ ++.+++.+.......+..... +...... ....
T Consensus 76 arN~gl~---~a~g~yi~flD~DD~~~p~~l~~l~~~~~~-~~~dvv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (328)
T PRK10073 76 ARNTGLA---VATGKYVAFPDADDVVYPTMYETLMTMALE-DDLDVAQCNADWCFRDTGETWQSIPSDRLRSTGVLSGPD 151 (328)
T ss_pred HHHHHHH---hCCCCEEEEECCCCccChhHHHHHHHHHHh-CCCCEEEEccEEEEeCCCccccccccccccccceechHH
Confidence 9999999 689999999999999999999999998874 444555443222211111000 0000000 0000
Q ss_pred hhhhhhccccccccccccceEeeeHHHHHHcC-CCCCCCchhHHHHHHHHHHCCCcEEEeccce
Q 011596 372 EVEQQVNGVFINFFGFNGTAGVWRIKALEDSG-GWMERTTVEDMDIAVRAHLRGWKFIFLNDVE 434 (482)
Q Consensus 372 ~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~iG-gf~~~~~~ED~~l~~rl~~~G~ki~~~~~~~ 434 (482)
........ ..+.....+.++||+.+++.| .|.+....||..+..++...+.++.+++++.
T Consensus 152 ~l~~~l~~---~~~~~~~~~~l~Rr~~l~~~~~~f~~~~~~eD~~~~~~~~~~~~~v~~~~~~l 212 (328)
T PRK10073 152 WLRMALSS---RRWTHVVWLGVYRRDFIVKNNIKFEPGLHHQDIPWTTEVMFNALRVRYTEQSL 212 (328)
T ss_pred HHHHHHhh---CCCCccHhHHHHHHHHHHHcCCccCCCCEeccHHHHHHHHHHCCEEEEECCCE
Confidence 00000000 011112335689999999987 4767667799999999999999999999887
|
|
| >PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2 | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.1e-21 Score=179.26 Aligned_cols=142 Identities=29% Similarity=0.516 Sum_probs=124.7
Q ss_pred EEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHHHHhhhhhhhhhhhhhhccccccccccccceEe
Q 011596 314 FVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQQVNGVFINFFGFNGTAGV 393 (482)
Q Consensus 314 ~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 393 (482)
||+++|+|+.++||+++++++.++ +|+++++|++..+.+ .+++.++++..++.......+......+....+.|++++
T Consensus 1 ~v~~~DaDt~~~~d~l~~~~~~~~-~~~~~~vq~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 78 (193)
T PF13632_consen 1 YVLFLDADTRLPPDFLERLVAALE-DPKVDAVQGPIIFRN-RGSLLTRLQDFEYAISHGLSRLSQSSLGRPLFLSGSGML 78 (193)
T ss_pred CEEEEcCCCCCChHHHHHHHHHHh-CCCceEEEccEEecC-CCChhheeehhhhhhhhhhhHHHHHhcCCCccccCccee
Confidence 689999999999999999999999 799999999998764 468888888887754444444444444455668999999
Q ss_pred eeHHHHHHcCCCC-CCCchhHHHHHHHHHHCCCcEEEeccceecccCCcCHHHHHHHHHhhhhhh
Q 011596 394 WRIKALEDSGGWM-ERTTVEDMDIAVRAHLRGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGP 457 (482)
Q Consensus 394 ~Rr~~l~~iGgf~-~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~~~~~qr~RW~~G~ 457 (482)
+|+++++++|||+ ...++||.+++.++.++||++.|+|++.++++.|.|+.++++||+||..|.
T Consensus 79 ~r~~~l~~vg~~~~~~~~~ED~~l~~~l~~~G~~~~~~~~~~~~~~~p~t~~~~~~Qr~RW~~g~ 143 (193)
T PF13632_consen 79 FRREALREVGGFDDPFSIGEDMDLGFRLRRAGYRIVYVPDAIVYTEAPPTFRAFIRQRRRWARGA 143 (193)
T ss_pred eeHHHHHHhCcccccccccchHHHHHHHHHCCCEEEEecccceeeeCCCCHHHHHHHHHHHHhhh
Confidence 9999999999999 778899999999999999999999999999999999999999999999995
|
|
| >PRK10063 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.3e-19 Score=175.41 Aligned_cols=190 Identities=10% Similarity=0.011 Sum_probs=131.4
Q ss_pred CeEEEEeecCCchHHHHHHHHHHHhC---CCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCcc
Q 011596 221 PMVLVQIPMCNEKEVYQQSIAAVCNL---DWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKA 297 (482)
Q Consensus 221 P~VsViIP~yne~~~l~~tL~Sll~q---~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka 297 (482)
|.||||||+||+++.+++||+|+.+| .++ .+||+|+||+|+|.+.+++++... +.++++ .. .++. |.+
T Consensus 1 ~~vSVIi~~yN~~~~l~~~l~sl~~~~~~~~~--~~EiIVvDdgStD~t~~i~~~~~~---~~~i~~--i~-~~~~-G~~ 71 (248)
T PRK10063 1 MLLSVITVAFRNLEGIVKTHASLRHLAQDPGI--SFEWIVVDGGSNDGTREFLENLNG---IFNLRF--VS-EPDN-GIY 71 (248)
T ss_pred CeEEEEEEeCCCHHHHHHHHHHHHHHHhCCCC--CEEEEEEECcCcccHHHHHHHhcc---cCCEEE--EE-CCCC-CHH
Confidence 67999999999999999999999853 344 488999999999999988876432 123333 33 3344 489
Q ss_pred ccHHHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHHHHhhhhhhhhhhhhhh
Q 011596 298 GNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQQV 377 (482)
Q Consensus 298 ~aln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~ 377 (482)
.++|.|++ .++||||+++|+|+.+.|+.++.+......++.. ++.|.......+.....+... ......
T Consensus 72 ~A~N~Gi~---~a~g~~v~~ld~DD~~~~~~~~~~~~~~~~~~~~-~v~g~~~~~~~~~~~~~~~~~-------~~~~~~ 140 (248)
T PRK10063 72 DAMNKGIA---MAQGRFALFLNSGDIFHQDAANFVRQLKMQKDNA-MIIGDALLDFGDGHKIKRSAK-------PGWYIY 140 (248)
T ss_pred HHHHHHHH---HcCCCEEEEEeCCcccCcCHHHHHHHHHhCCCCe-EEEeeeEEEcCCCcEEEEccC-------ChhHHh
Confidence 99999999 6899999999999999998765544443333444 444443322111111110000 000000
Q ss_pred ccccccccccccceEeeeHHHHHHcCCCCCC-CchhHHHHHHHHHHCCCcEEEeccceec
Q 011596 378 NGVFINFFGFNGTAGVWRIKALEDSGGWMER-TTVEDMDIAVRAHLRGWKFIFLNDVECQ 436 (482)
Q Consensus 378 ~~~~~~~~~~~G~~~~~Rr~~l~~iGgf~~~-~~~ED~~l~~rl~~~G~ki~~~~~~~~~ 436 (482)
....+++.+.+++++.++. |+|++. ..+||++++.|+..+|+++.++|...+.
T Consensus 141 -----~~~~~~~~~~~~~~~~~~~-~~fd~~~~~~~Dydl~lrl~~~g~~~~~v~~~l~~ 194 (248)
T PRK10063 141 -----HSLPASHQAIFFPVSGLKK-WRYDLQYKVSSDYALAARLYKAGYAFKKLNGLVSE 194 (248)
T ss_pred -----cCCCCCCcEEEEEHHHHhc-CCCCcccchHHhHHHHHHHHHcCCcEEEcCceeEE
Confidence 0112456788899999876 678765 5679999999999999999999988854
|
|
| >cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.1e-19 Score=169.39 Aligned_cols=195 Identities=15% Similarity=0.129 Sum_probs=136.4
Q ss_pred EEeecCCchHHHHHHHHHHHhCCC--CCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHH
Q 011596 225 VQIPMCNEKEVYQQSIAAVCNLDW--PKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKS 302 (482)
Q Consensus 225 ViIP~yne~~~l~~tL~Sll~q~y--p~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~ 302 (482)
|+||+|||++.+.++|+++.+|.+ +...++|+|+||+|+|.+.++++++.++++. .+.+.....+.| +++++|.
T Consensus 1 iiip~yN~~~~l~~~l~~l~~~~~~~~~~~~eiivvdd~S~D~t~~~~~~~~~~~~~---~i~~i~~~~n~G-~~~a~~~ 76 (211)
T cd04188 1 VVIPAYNEEKRLPPTLEEAVEYLEERPSFSYEIIVVDDGSKDGTAEVARKLARKNPA---LIRVLTLPKNRG-KGGAVRA 76 (211)
T ss_pred CEEcccChHHHHHHHHHHHHHHHhccCCCCEEEEEEeCCCCCchHHHHHHHHHhCCC---cEEEEEcccCCC-cHHHHHH
Confidence 689999999999999999999865 2235889999999999999998877664332 223333444555 9999999
Q ss_pred HhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCC----CChHHHHHhhhhhhhhhhhhhhc
Q 011596 303 AMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKD----ENLLTRLQDINLSFHFEVEQQVN 378 (482)
Q Consensus 303 al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~----~~~~~~~~~~~~~~~~~~~~~~~ 378 (482)
|++ .+.+|||+++|+|+.++|+++.+++..+.+ +..+++.|........ ..+............. ....
T Consensus 77 g~~---~a~gd~i~~ld~D~~~~~~~l~~l~~~~~~-~~~~~v~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 149 (211)
T cd04188 77 GML---AARGDYILFADADLATPFEELEKLEEALKT-SGYDIAIGSRAHLASAAVVKRSWLRNLLGRGFNFLV---RLLL 149 (211)
T ss_pred HHH---HhcCCEEEEEeCCCCCCHHHHHHHHHHHhc-cCCcEEEEEeeccCCcccccccHHHHHHHHHHHHHH---HHHc
Confidence 999 688999999999999999999999999764 4445666654433222 1233222221111111 1111
Q ss_pred cccccccccccceEeeeHHHHHHcCCC-CCCCchhHHHHHHHHHHCCCcEEEecc
Q 011596 379 GVFINFFGFNGTAGVWRIKALEDSGGW-MERTTVEDMDIAVRAHLRGWKFIFLND 432 (482)
Q Consensus 379 ~~~~~~~~~~G~~~~~Rr~~l~~iGgf-~~~~~~ED~~l~~rl~~~G~ki~~~~~ 432 (482)
+. ..........+++|++++++++. ....+.+|.++..++.+.|+++.++|-
T Consensus 150 ~~--~~~d~~~g~~~~~r~~~~~~~~~~~~~~~~~d~el~~r~~~~g~~~~~vpi 202 (211)
T cd04188 150 GL--GIKDTQCGFKLFTRDAARRLFPRLHLERWAFDVELLVLARRLGYPIEEVPV 202 (211)
T ss_pred CC--CCcccccCceeEcHHHHHHHHhhhhccceEeeHHHHHHHHHcCCeEEEcCc
Confidence 11 11111234578999999998653 233567899999999999999999983
|
UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate. |
| >COG1216 Predicted glycosyltransferases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.8e-19 Score=179.78 Aligned_cols=212 Identities=18% Similarity=0.273 Sum_probs=152.7
Q ss_pred CCeEEEEeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCcccc
Q 011596 220 FPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGN 299 (482)
Q Consensus 220 ~P~VsViIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~a 299 (482)
.|.++++|++||..+.+.+|+.++.+|+|+.+. |+++||+|.|.+.+.+++.. ..++.+....+|.| -+++
T Consensus 2 ~~~i~~iiv~yn~~~~l~~~l~~l~~~~~~~~~--iv~vDn~s~d~~~~~~~~~~------~~~v~~i~~~~NlG-~agg 72 (305)
T COG1216 2 MPKISIIIVTYNRGEDLVECLASLAAQTYPDDV--IVVVDNGSTDGSLEALKARF------FPNVRLIENGENLG-FAGG 72 (305)
T ss_pred CcceEEEEEecCCHHHHHHHHHHHhcCCCCCcE--EEEccCCCCCCCHHHHHhhc------CCcEEEEEcCCCcc-chhh
Confidence 478999999999999999999999999999843 44899999999988776321 23455555555555 7888
Q ss_pred HHHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHHHHhh--hhhhh--hhhhh
Q 011596 300 LKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDI--NLSFH--FEVEQ 375 (482)
Q Consensus 300 ln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~~~~~--~~~~~--~~~~~ 375 (482)
.|.|++.+....++|++++|.|+.++|++|.+++..++.++..+++++.................. ..... .....
T Consensus 73 ~n~g~~~a~~~~~~~~l~LN~D~~~~~~~l~~ll~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (305)
T COG1216 73 FNRGIKYALAKGDDYVLLLNPDTVVEPDLLEELLKAAEEDPAAGVVGPLIRNYDESLYIDRRGGESDGLTGGWRASPLLE 152 (305)
T ss_pred hhHHHHHHhcCCCcEEEEEcCCeeeChhHHHHHHHHHHhCCCCeEeeeeEecCCCCcchheeccccccccccceeccccc
Confidence 899998653333349999999999999999999999999889888887765443221111111000 00000 00000
Q ss_pred hhc--ccccccc-ccccceEeeeHHHHHHcCCCCCC--CchhHHHHHHHHHHCCCcEEEeccceecccCC
Q 011596 376 QVN--GVFINFF-GFNGTAGVWRIKALEDSGGWMER--TTVEDMDIAVRAHLRGWKFIFLNDVECQCELP 440 (482)
Q Consensus 376 ~~~--~~~~~~~-~~~G~~~~~Rr~~l~~iGgf~~~--~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p 440 (482)
... ....... .++|+++++|+++++++|+|++. ...||.|++.|+.+.||++.++|.+.++|...
T Consensus 153 ~~~~~~~~~~~~~~~~G~~~li~~~~~~~vG~~de~~F~y~eD~D~~~R~~~~G~~i~~~p~a~i~H~~g 222 (305)
T COG1216 153 IAPDLSSYLEVVASLSGACLLIRREAFEKVGGFDERFFIYYEDVDLCLRARKAGYKIYYVPDAIIYHKIG 222 (305)
T ss_pred ccccccchhhhhhhcceeeeEEcHHHHHHhCCCCcccceeehHHHHHHHHHHcCCeEEEeeccEEEEecc
Confidence 000 0000111 26899999999999999999986 45699999999999999999999999888543
|
|
| >PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=6.8e-18 Score=170.13 Aligned_cols=207 Identities=14% Similarity=0.080 Sum_probs=141.0
Q ss_pred CCCeEEEEeecCCchHHHHHHHHHHHhCC------CCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCC
Q 011596 219 FFPMVLVQIPMCNEKEVYQQSIAAVCNLD------WPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILR 292 (482)
Q Consensus 219 ~~P~VsViIP~yne~~~l~~tL~Sll~q~------yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~ 292 (482)
..|.+||+||+|||++.+.++++++.++. .+...+||+||||||+|.|.++++++.+++...+.++.+...+.+
T Consensus 68 ~~~~isVVIP~yNe~~~i~~~L~~l~~~~~~~~~~~~~~~~EIIVVDDgStD~T~~i~~~~~~~~~~~~~~i~vi~~~~N 147 (333)
T PTZ00260 68 SDVDLSIVIPAYNEEDRLPKMLKETIKYLESRSRKDPKFKYEIIIVNDGSKDKTLKVAKDFWRQNINPNIDIRLLSLLRN 147 (333)
T ss_pred CCeEEEEEEeeCCCHHHHHHHHHHHHHHHHhhhccCCCCCEEEEEEeCCCCCchHHHHHHHHHhcCCCCCcEEEEEcCCC
Confidence 46789999999999999999999987642 334468999999999999999988876643111223333333444
Q ss_pred CCCccccHHHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhc--CCCeEEEeeeeeeecCC-----CChHHHHHhh
Q 011596 293 DGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKD--NEELGLVQARWSFVNKD-----ENLLTRLQDI 365 (482)
Q Consensus 293 ~g~Ka~aln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~--~p~v~~V~~~~~~~n~~-----~~~~~~~~~~ 365 (482)
. ||+.|+|.|++ .+++|+|+++|+|+..+|+.+.+++..+.+ +++.++|.|.......+ .++..+....
T Consensus 148 ~-G~~~A~~~Gi~---~a~gd~I~~~DaD~~~~~~~l~~l~~~l~~~~~~~~dvV~GsR~~~~~~~~~~~~~~~r~~~~~ 223 (333)
T PTZ00260 148 K-GKGGAVRIGML---ASRGKYILMVDADGATDIDDFDKLEDIMLKIEQNGLGIVFGSRNHLVDSDVVAKRKWYRNILMY 223 (333)
T ss_pred C-ChHHHHHHHHH---HccCCEEEEEeCCCCCCHHHHHHHHHHHHHhhccCCceEEeeccccccCcccccCcHHHHHHHH
Confidence 4 49999999999 588999999999999999999999998864 46788888875432221 1233322221
Q ss_pred hhhhhhhhhhhhccccccccccccceEeeeHHHHHHcC-CCCCCCchhHHHHHHHHHHCCCcEEEeccce
Q 011596 366 NLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEDSG-GWMERTTVEDMDIAVRAHLRGWKFIFLNDVE 434 (482)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~iG-gf~~~~~~ED~~l~~rl~~~G~ki~~~~~~~ 434 (482)
.+. ... ....+. +..-.....-+++|++++.+= ........-|.++..++.+.|+++..+|-..
T Consensus 224 ~~~--~l~-~~~~~~--~i~D~~~Gfk~~~r~~~~~i~~~~~~~~~~fd~Ell~~a~~~g~~I~EvPv~~ 288 (333)
T PTZ00260 224 GFH--FIV-NTICGT--NLKDTQCGFKLFTRETARIIFPSLHLERWAFDIEIVMIAQKLNLPIAEVPVNW 288 (333)
T ss_pred HHH--HHH-HHHcCC--CcccCCCCeEEEeHHHHHHHhhhccccCccchHHHHHHHHHcCCCEEEEceee
Confidence 111 111 111111 111122334689999998761 1111234568999999999999999998754
|
|
| >PF13506 Glyco_transf_21: Glycosyl transferase family 21 | Back alignment and domain information |
|---|
Probab=99.80 E-value=4.7e-19 Score=162.08 Aligned_cols=163 Identities=24% Similarity=0.353 Sum_probs=131.7
Q ss_pred EEEEeccCCCCCccccHHHHhhhccc-CCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHHH
Q 011596 284 IVYRHRILRDGYKAGNLKSAMNCSYV-KDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRL 362 (482)
Q Consensus 284 vv~~~~~~~~g~Ka~aln~al~~~~~-a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~~ 362 (482)
++....+...++|.+||..+++ . +++|+|++.|+|+.++|++|.+++..++ +|++++|++.+...+. .++.+.+
T Consensus 6 lvv~~~~~g~N~Kv~nL~~~~~---~~a~~d~~~~~DsDi~v~p~~L~~lv~~l~-~p~vglVt~~~~~~~~-~~~~~~l 80 (175)
T PF13506_consen 6 LVVGGPPRGCNPKVNNLAQGLE---AGAKYDYLVISDSDIRVPPDYLRELVAPLA-DPGVGLVTGLPRGVPA-RGFWSRL 80 (175)
T ss_pred EEECCCCCCCChHHHHHHHHHH---hhCCCCEEEEECCCeeECHHHHHHHHHHHh-CCCCcEEEecccccCC-cCHHHHH
Confidence 5544455556679999999999 5 8999999999999999999999999998 4999999998776555 4676666
Q ss_pred HhhhhhhhhhhhhhhccccccccccccceEeeeHHHHHHcCCCCC--CCchhHHHHHHHHHHCCCcEEEeccceecccCC
Q 011596 363 QDINLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEDSGGWME--RTTVEDMDIAVRAHLRGWKFIFLNDVECQCELP 440 (482)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~iGgf~~--~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p 440 (482)
......+....... .....++.|.++++||++++++|||.. +.++||+.++.++.++|+++.+.+.+.+....+
T Consensus 81 ~~~~~~~~~~~~~a----~~~~~~~~G~~m~~rr~~L~~~GG~~~l~~~ladD~~l~~~~~~~G~~v~~~~~~v~~~~~~ 156 (175)
T PF13506_consen 81 EAAFFNFLPGVLQA----LGGAPFAWGGSMAFRREALEEIGGFEALADYLADDYALGRRLRARGYRVVLSPYPVVQTSVP 156 (175)
T ss_pred HHHHHhHHHHHHHH----hcCCCceecceeeeEHHHHHHcccHHHHhhhhhHHHHHHHHHHHCCCeEEEcchheeecccC
Confidence 54443333333222 223334789999999999999999965 588999999999999999999999988777776
Q ss_pred ----cCHHHHHHHHHhhhh
Q 011596 441 ----ESYEAYRKQQHRWHS 455 (482)
Q Consensus 441 ----~t~~~~~~qr~RW~~ 455 (482)
.+++++++++.||++
T Consensus 157 ~~~~~s~~~~~~r~~RW~r 175 (175)
T PF13506_consen 157 RTLEDSFRDFFRRQLRWAR 175 (175)
T ss_pred ccccccHHHHHHHHHhhcC
Confidence 479999999999974
|
|
| >KOG2547 consensus Ceramide glucosyltransferase [Lipid transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.9e-18 Score=165.97 Aligned_cols=231 Identities=16% Similarity=0.221 Sum_probs=187.3
Q ss_pred CCCeEEEEeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccc
Q 011596 219 FFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAG 298 (482)
Q Consensus 219 ~~P~VsViIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~ 298 (482)
.+|.|||+.|.-+-++.+...+++....+|+. +|+..+-+++||...++++.+..+||.-..++++--..-+...|.+
T Consensus 83 ~LPgVSiikPl~G~d~nl~~Nlesffts~Y~~--~ElLfcv~s~eDpAi~vv~~Ll~kyp~VdAklf~gG~~vg~npKIn 160 (431)
T KOG2547|consen 83 KLPGVSIIKPLKGVDPNLYHNLESFFTSQYHK--YELLFCVESSEDPAIEVVERLLKKYPNVDAKLFFGGEKVGLNPKIN 160 (431)
T ss_pred CCCCceEEeecccCCchhHHhHHHHHhhccCc--eEEEEEEccCCCcHHHHHHHHHhhCCCcceEEEEcccccccChhhh
Confidence 58999999999999999999999999999996 5566666667777778899999999977777776544445557999
Q ss_pred cHHHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHHHHhhhhhhhhhhhhhhc
Q 011596 299 NLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQQVN 378 (482)
Q Consensus 299 aln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (482)
|+--|.+ .+++|+|++.|+|..+.||.+..|+..|..+.+.+.|++...+..+++ +-..+....+....... ...
T Consensus 161 N~mpgy~---~a~ydlvlisDsgI~m~pdtildm~t~M~shekmalvtq~py~~dr~G-f~atle~~~fgTsh~r~-yl~ 235 (431)
T KOG2547|consen 161 NMMPGYR---AAKYDLVLISDSGIFMKPDTILDMATTMMSHEKMALVTQTPYCKDRQG-FDATLEQVYFGTSHPRI-YLS 235 (431)
T ss_pred ccCHHHH---HhcCCEEEEecCCeeecCchHHHHHHhhhcccceeeecCCceeecccc-chhhhhheeeccCCceE-EEc
Confidence 9988998 799999999999999999999999999998889999998887777654 32323333332222222 223
Q ss_pred cccccccccccceEeeeHHHHHHcCCCCCC--CchhHHHHHHHHHHCCCcEEEeccceecccCCcCHHHHHHHHHhhhhh
Q 011596 379 GVFINFFGFNGTAGVWRIKALEDSGGWMER--TTVEDMDIAVRAHLRGWKFIFLNDVECQCELPESYEAYRKQQHRWHSG 456 (482)
Q Consensus 379 ~~~~~~~~~~G~~~~~Rr~~l~~iGgf~~~--~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~~~~~qr~RW~~G 456 (482)
+...++.|.+|..+++|++++++.||+... .+.||+.....+..+||+..+...+.-++....+...+.+|..||..-
T Consensus 236 ~n~~~~~c~tgms~~mrK~~ld~~ggi~~f~~yLaedyFaaksllSRG~ksaist~palQnSas~~mssf~~Ri~rwvkL 315 (431)
T KOG2547|consen 236 GNVLGFNCSTGMSSMMRKEALDECGGISAFGGYLAEDYFAAKSLLSRGWKSAISTHPALQNSASVTMSSFLDRIIRWVKL 315 (431)
T ss_pred cccccccccccHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhhhhhcccchhhhhhhhHHHHHHHHHHHhhhh
Confidence 334456667899999999999999998544 678999999999999999999888887778888899999999999864
|
|
| >cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.9e-18 Score=157.45 Aligned_cols=180 Identities=16% Similarity=0.137 Sum_probs=128.4
Q ss_pred EEeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHh
Q 011596 225 VQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAM 304 (482)
Q Consensus 225 ViIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al 304 (482)
|+||+||+++.+.+||+|+.+|.|+....+|+|+||++++.+.+++++..++++ .+.+.....+.| +++++|.|+
T Consensus 1 iii~~~n~~~~l~~~l~sl~~~~~~~~~~eiivvd~~s~d~~~~~~~~~~~~~~----~~~~~~~~~n~G-~~~a~n~g~ 75 (185)
T cd04179 1 VVIPAYNEEENIPELVERLLAVLEEGYDYEIIVVDDGSTDGTAEIARELAARVP----RVRVIRLSRNFG-KGAAVRAGF 75 (185)
T ss_pred CeecccChHhhHHHHHHHHHHHhccCCCEEEEEEcCCCCCChHHHHHHHHHhCC----CeEEEEccCCCC-ccHHHHHHH
Confidence 689999999999999999999998544688999999999999988887766443 223333445555 999999999
Q ss_pred hhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCC--CChHHHHHhhhhhhhhhhhhhhccccc
Q 011596 305 NCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKD--ENLLTRLQDINLSFHFEVEQQVNGVFI 382 (482)
Q Consensus 305 ~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (482)
+ .+.+||++++|+|+.+.|++|++++..+.. ++.+++.+.....+.. .+...++....+. ...... ...
T Consensus 76 ~---~a~gd~i~~lD~D~~~~~~~l~~l~~~~~~-~~~~~v~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~---~~~ 146 (185)
T cd04179 76 K---AARGDIVVTMDADLQHPPEDIPKLLEKLLE-GGADVVIGSRFVRGGGAGMPLLRRLGSRLFN--FLIRLL---LGV 146 (185)
T ss_pred H---HhcCCEEEEEeCCCCCCHHHHHHHHHHHhc-cCCcEEEEEeecCCCcccchHHHHHHHHHHH--HHHHHH---cCC
Confidence 9 588899999999999999999999998664 5567777776544432 2233322211111 111111 111
Q ss_pred cccccccceEeeeHHHHHHc--CCCCCCCchhHHHHHHH
Q 011596 383 NFFGFNGTAGVWRIKALEDS--GGWMERTTVEDMDIAVR 419 (482)
Q Consensus 383 ~~~~~~G~~~~~Rr~~l~~i--Ggf~~~~~~ED~~l~~r 419 (482)
......|+++++||++++++ |++.. .+.+|+++++|
T Consensus 147 ~~~~~~~~~~~~~r~~~~~i~~~~~~~-~~~~~~~~~~~ 184 (185)
T cd04179 147 RISDTQSGFRLFRREVLEALLSLLESN-GFEFGLELLVG 184 (185)
T ss_pred CCcCCCCceeeeHHHHHHHHHhhcccc-CcceeeEeeec
Confidence 23335788899999999999 45533 56677777655
|
DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex |
| >PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ] | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.9e-17 Score=163.34 Aligned_cols=205 Identities=17% Similarity=0.247 Sum_probs=136.8
Q ss_pred EEEeecCCch------HHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCC--CC
Q 011596 224 LVQIPMCNEK------EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRD--GY 295 (482)
Q Consensus 224 sViIP~yne~------~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~--g~ 295 (482)
|||||++++. +.+..++.++..+.- +..++|||+||++++...+.+++..+ ..+.. .++...... =+
T Consensus 1 SiIIPv~~~~~~~~i~~~l~~~l~~l~~~~~-~~~~eiIvvd~~s~~~~~~~l~~~~~---~~~~~-~~i~~~~~~~~f~ 75 (281)
T PF10111_consen 1 SIIIPVRNRSERPDILERLRNCLESLSQFQS-DPDFEIIVVDDGSSDEFDEELKKLCE---KNGFI-RYIRHEDNGEPFS 75 (281)
T ss_pred CEEEEecCCccchHHHHHHHHHHHHHHhcCC-CCCEEEEEEECCCchhHHHHHHHHHh---ccCce-EEEEcCCCCCCcC
Confidence 6999999998 356666777776432 34689999999999988666666655 33333 122222222 25
Q ss_pred ccccHHHHhhhcccCCceEEEEEcCCCCCChHHHHHHHH---HhhcCCCeEEEeeeeeeecCCCChHHHHHhhhhhhhhh
Q 011596 296 KAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVP---HFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHFE 372 (482)
Q Consensus 296 Ka~aln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~---~f~~~p~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~ 372 (482)
++.++|.|++ .+++|+|+|+|+|+.++|+++.+++. .+..+++. .+..+..+.+...+... ...........
T Consensus 76 ~a~arN~g~~---~A~~d~l~flD~D~i~~~~~i~~~~~~~~~l~~~~~~-~~~~p~~yl~~~~~~~~-~~~~~~~~~~~ 150 (281)
T PF10111_consen 76 RAKARNIGAK---YARGDYLIFLDADCIPSPDFIEKLLNHVKKLDKNPNA-FLVYPCLYLSEEGSEKF-YSQFKNLWDHE 150 (281)
T ss_pred HHHHHHHHHH---HcCCCEEEEEcCCeeeCHHHHHHHHHHHHHHhcCCCc-eEEEeeeeccchhhHHH-hhcchhcchHH
Confidence 8999999999 68999999999999999999999999 56654433 33333333433222110 00000000111
Q ss_pred hh-hhhc--cccccccccccceEeeeHHHHHHcCCCCCCC---chhHHHHHHHHHHCCCcEEEeccceeccc
Q 011596 373 VE-QQVN--GVFINFFGFNGTAGVWRIKALEDSGGWMERT---TVEDMDIAVRAHLRGWKFIFLNDVECQCE 438 (482)
Q Consensus 373 ~~-~~~~--~~~~~~~~~~G~~~~~Rr~~l~~iGgf~~~~---~~ED~~l~~rl~~~G~ki~~~~~~~~~~~ 438 (482)
.. .... ..........|++++++|+.+.++|||+|.. ..||.|++.|+.+.|.++...++..+++.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~s~~~~i~r~~f~~iGGfDE~f~G~G~ED~D~~~RL~~~~~~~~~~~~~~~~~~ 222 (281)
T PF10111_consen 151 FLESFISGKNSLWEFIAFASSCFLINREDFLEIGGFDERFRGWGYEDIDFGYRLKKAGYKFKRSPDYLVYHS 222 (281)
T ss_pred HHHHHhhccccccccccccceEEEEEHHHHHHhCCCCccccCCCcchHHHHHHHHHcCCcEecChHHhcccc
Confidence 11 1111 1111222356799999999999999999974 46999999999999999999998887553
|
|
| >PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.9e-19 Score=159.16 Aligned_cols=169 Identities=21% Similarity=0.271 Sum_probs=114.1
Q ss_pred EEEeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHH
Q 011596 224 LVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSA 303 (482)
Q Consensus 224 sViIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~a 303 (482)
||+||+||+.+.+.++|+|+.+|++++ .+|+|+||++++.+.+++++..+ .+.++.+...+.+. |++.++|.|
T Consensus 1 Svvip~~n~~~~l~~~l~sl~~q~~~~--~eiivvdd~s~d~~~~~~~~~~~----~~~~i~~i~~~~n~-g~~~~~n~~ 73 (169)
T PF00535_consen 1 SVVIPTYNEAEYLERTLESLLKQTDPD--FEIIVVDDGSTDETEEILEEYAE----SDPNIRYIRNPENL-GFSAARNRG 73 (169)
T ss_dssp EEEEEESS-TTTHHHHHHHHHHHSGCE--EEEEEEECS-SSSHHHHHHHHHC----CSTTEEEEEHCCCS-HHHHHHHHH
T ss_pred CEEEEeeCCHHHHHHHHHHHhhccCCC--EEEEEeccccccccccccccccc----cccccccccccccc-ccccccccc
Confidence 799999999999999999999996655 77999999999999888876643 34555666566555 499999999
Q ss_pred hhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHHHHhhhhhhhhhhhhhhcccccc
Q 011596 304 MNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQQVNGVFIN 383 (482)
Q Consensus 304 l~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (482)
++ .++++|++++|+|+.++|++|++++..+.+++. +++.+.......+............................
T Consensus 74 ~~---~a~~~~i~~ld~D~~~~~~~l~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (169)
T PF00535_consen 74 IK---HAKGEYILFLDDDDIISPDWLEELVEALEKNPP-DVVIGSVIYIDDDNRYPDRRLRFSFWNRFERKIFNNIRFWK 149 (169)
T ss_dssp HH---H--SSEEEEEETTEEE-TTHHHHHHHHHHHCTT-EEEEEEEEEEECTTETEECCCTSEEEECCHCHHHHTTHSTT
T ss_pred cc---ccceeEEEEeCCCceEcHHHHHHHHHHHHhCCC-cEEEEEEEEecCCccccccccchhhhhhhhhHHHHhhhcCC
Confidence 99 689999999999999999999999999997544 34444433333322211111110000000111111122223
Q ss_pred ccccccceEeeeHHHHHHcC
Q 011596 384 FFGFNGTAGVWRIKALEDSG 403 (482)
Q Consensus 384 ~~~~~G~~~~~Rr~~l~~iG 403 (482)
...+.|++.++||++++++|
T Consensus 150 ~~~~~~~~~~~rr~~~~~~~ 169 (169)
T PF00535_consen 150 ISFFIGSCALFRRSVFEEIG 169 (169)
T ss_dssp SSEESSSCEEEEEHHHHHCH
T ss_pred cccccccEEEEEHHHHHhhC
Confidence 44478999999999999975
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A .... |
| >TIGR01556 rhamnosyltran L-rhamnosyltransferase | Back alignment and domain information |
|---|
Probab=99.77 E-value=5.5e-18 Score=167.09 Aligned_cols=198 Identities=15% Similarity=0.110 Sum_probs=131.7
Q ss_pred ecCCch-HHHHHHHHHHHhCCCCCCceEEEEEcCCCCHH--HHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHh
Q 011596 228 PMCNEK-EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPT--AQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAM 304 (482)
Q Consensus 228 P~yne~-~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~--t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al 304 (482)
.+||++ +.++++++|+.+|. .+|+||||+|+++ +.++. + ...++.+.+.+.+.| .++++|.|+
T Consensus 1 Vtyn~~~~~l~~~l~sl~~q~-----~~iiVVDN~S~~~~~~~~~~----~----~~~~i~~i~~~~N~G-~a~a~N~Gi 66 (281)
T TIGR01556 1 VTFNPDLEHLGELITSLPKQV-----DRIIAVDNSPHSDQPLKNAR----L----RGQKIALIHLGDNQG-IAGAQNQGL 66 (281)
T ss_pred CccCccHHHHHHHHHHHHhcC-----CEEEEEECcCCCcHhHHHHh----c----cCCCeEEEECCCCcc-hHHHHHHHH
Confidence 379975 89999999999985 3588999987543 33222 2 112344444455555 899999999
Q ss_pred hhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCC-CeEEEeeeeeeecCCCChHHHHHhhhhhhhhhhhhhhcccccc
Q 011596 305 NCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNE-ELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQQVNGVFIN 383 (482)
Q Consensus 305 ~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p-~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (482)
+.+...++|||+++|+|+.++++++++++..++.++ +++++++....... ......................... ..
T Consensus 67 ~~a~~~~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 144 (281)
T TIGR01556 67 DASFRRGVQGVLLLDQDSRPGNAFLAAQWKLLSAENGQACALGPRFFDRGT-SRRLPAIHLDGLLLRQISLDGLTTP-QK 144 (281)
T ss_pred HHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHhcCCceEEECCeEEcCCC-cccCCceeecccceeeecccccCCc-ee
Confidence 965445899999999999999999999999998655 77887765422211 1111100000000000000000000 01
Q ss_pred ccccccceEeeeHHHHHHcCCCCCCC--chhHHHHHHHHHHCCCcEEEeccceecccCCc
Q 011596 384 FFGFNGTAGVWRIKALEDSGGWMERT--TVEDMDIAVRAHLRGWKFIFLNDVECQCELPE 441 (482)
Q Consensus 384 ~~~~~G~~~~~Rr~~l~~iGgf~~~~--~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~ 441 (482)
...+.++++++|+++++++|+|++.. -.||.|+++|+.++|+++.++|++..++....
T Consensus 145 ~~~~~~sg~li~~~~~~~iG~fde~~fi~~~D~e~~~R~~~~G~~i~~~~~~~~~H~~g~ 204 (281)
T TIGR01556 145 TSFLISSGCLITREVYQRLGMMDEELFIDHVDTEWSLRAQNYGIPLYIDPDIVLEHRIGD 204 (281)
T ss_pred ccEEEcCcceeeHHHHHHhCCccHhhcccchHHHHHHHHHHCCCEEEEeCCEEEEEecCC
Confidence 11134566789999999999998873 35899999999999999999999998776543
|
Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids. |
| >PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals | Back alignment and domain information |
|---|
Probab=99.75 E-value=5e-19 Score=187.26 Aligned_cols=192 Identities=25% Similarity=0.395 Sum_probs=140.2
Q ss_pred eEEEEeccCCCC----CccccHHHHhhhc-ccCCceEEEEEcCCCCC-ChHHHHHHHHHhhcCCC----eEEEeeeeeee
Q 011596 283 NIVYRHRILRDG----YKAGNLKSAMNCS-YVKDYEFVAIFDADFQP-NPDFLRRTVPHFKDNEE----LGLVQARWSFV 352 (482)
Q Consensus 283 ~vv~~~~~~~~g----~Ka~aln~al~~~-~~a~~d~Vl~lDaD~~~-~pd~L~~lv~~f~~~p~----v~~V~~~~~~~ 352 (482)
+++|+.|+++.| .|+||||..++.+ ...+++||+.+|+|... +|+.+++.+..|. ||+ ++.||.++.+.
T Consensus 167 ~lvYvsREKrp~~~Hh~KAGAmNaL~RvSa~~tN~p~iLnlDcD~y~nn~~~~~~amc~~~-d~~~g~~~~~vQfpq~f~ 245 (720)
T PF03552_consen 167 MLVYVSREKRPGYPHHFKAGAMNALLRVSAVMTNAPFILNLDCDMYINNSQALREAMCFFM-DPKIGKKIAFVQFPQRFD 245 (720)
T ss_pred eEEEEeccCCCCCCchhhhcccccccccceeecCCCEEEEecccccccchHHHHHHHHhhc-cCCCCCeeEEEeCCceeC
Confidence 578888877654 7999999988753 35789999999999955 7999999999987 465 99999999998
Q ss_pred cCCCChHHHHHhhhhhhhhhhhhhhccccccccccccceEeeeHHHHHHc------------------------------
Q 011596 353 NKDENLLTRLQDINLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEDS------------------------------ 402 (482)
Q Consensus 353 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~i------------------------------ 402 (482)
|.+.+-. ..+....+.-...+..++..+.+ +.|+++++||+++-..
T Consensus 246 ~i~~~d~--y~~~~~~~~~~~~~g~dG~~gp~--y~Gtgc~~rR~al~g~~~~~~~~~~~~~~~~~~~c~~~~k~~~~~~ 321 (720)
T PF03552_consen 246 GIDKNDR--YGNQNRVFFDINMRGLDGLQGPF--YVGTGCFFRREALYGFDPPRYEKDPEKTCCCCSCCFGRRKKKKSKK 321 (720)
T ss_pred CCCcCCC--CCccceeeeeccccccccCCCce--eeecCcceechhhhCCCCCchhcccCcceeeeecccCCcccccccc
Confidence 8755321 11111111111123333333333 5677777777766110
Q ss_pred --------------------------------------------------------------------------------
Q 011596 403 -------------------------------------------------------------------------------- 402 (482)
Q Consensus 403 -------------------------------------------------------------------------------- 402 (482)
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~FG~S~~fi~S~~~~~~~~~~~~~~~~~L~EA~~V~ 401 (720)
T PF03552_consen 322 KPKKRASKRRESSSPIFALEDIEEGAEGSDEERSSLMSQKELEKKFGQSPEFIASTLMAQGGVPRSPSPASLLEEAIHVA 401 (720)
T ss_pred cchhccccccccccccccccccccccccchhhhhhcchhHHHHHHhcCCHHHHHHHHHHhcCCCCCCChHHHHHHHHHHh
Confidence
Q ss_pred ----------C---CCCCCCchhHHHHHHHHHHCCCcEEEeccce--ecccCCcCHHHHHHHHHhhhhhhHHHHHHhChh
Q 011596 403 ----------G---GWMERTTVEDMDIAVRAHLRGWKFIFLNDVE--CQCELPESYEAYRKQQHRWHSGPMQLFRLCLPD 467 (482)
Q Consensus 403 ----------G---gf~~~~~~ED~~l~~rl~~~G~ki~~~~~~~--~~~~~p~t~~~~~~qr~RW~~G~~q~~~~~~~~ 467 (482)
| ||..++++||+..+++++++||+.+|+.... ..+..|.++.+.+.|+.||+.|.+|++......
T Consensus 402 sC~YE~~T~WGkevGwiYGSvtEDv~TG~rmH~rGWrSvYc~p~r~AF~G~AP~nL~d~L~Q~~RWA~GslEI~fSr~~P 481 (720)
T PF03552_consen 402 SCGYEDKTEWGKEVGWIYGSVTEDVLTGFRMHCRGWRSVYCNPKRPAFLGSAPINLSDRLHQVKRWATGSLEIFFSRHCP 481 (720)
T ss_pred cCCccccCCcccccceEEEecccccccceeEeeCceeeEEeccccchhcccCCCChhhhceeeeeEeeeeEeeehhcCCc
Confidence 1 2333457899999999999999999987543 778999999999999999999999999877776
Q ss_pred hhhc---Ccchhhcc
Q 011596 468 IIRA---KVYILSNT 479 (482)
Q Consensus 468 i~~s---~~~~~~k~ 479 (482)
++.. ++++.+++
T Consensus 482 l~~g~~~rL~~lQrL 496 (720)
T PF03552_consen 482 LWYGYGGRLKFLQRL 496 (720)
T ss_pred hhccCCCCCcHHHHH
Confidence 6654 78887765
|
The genes that synthesize cellulose in higher plants differ greatly from the well-characterised genes found in Acetobacter and Agrobacterium spp. More correctly designated as "cellulose synthase catalytic subunits", plant cellulose synthase (CesA) proteins are integral membrane proteins, approximately 1,000 amino acids in length. There are a number of highly conserved residues, including several motifs shown to be necessary for processive glycosyltransferase activity [].; GO: 0016760 cellulose synthase (UDP-forming) activity, 0030244 cellulose biosynthetic process, 0016020 membrane |
| >PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.4e-17 Score=162.15 Aligned_cols=198 Identities=15% Similarity=0.091 Sum_probs=130.9
Q ss_pred CCCeEEEEeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccc
Q 011596 219 FFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAG 298 (482)
Q Consensus 219 ~~P~VsViIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~ 298 (482)
..|+|||+||+|||++.|.++|+++.+|.++....+|+|+||+|+|.|.+++++...+... ...++ .....+.||+.
T Consensus 29 ~~~~vSVVIPayNee~~I~~~l~sl~~~~~~~~~~EIIVVDDgStD~T~~ia~~~~~~v~~-~~~~~--~~~~~n~Gkg~ 105 (306)
T PRK13915 29 AGRTVSVVLPALNEEETVGKVVDSIRPLLMEPLVDELIVIDSGSTDATAERAAAAGARVVS-REEIL--PELPPRPGKGE 105 (306)
T ss_pred CCCCEEEEEecCCcHHHHHHHHHHHHHHhccCCCcEEEEEeCCCccHHHHHHHHhcchhhc-chhhh--hccccCCCHHH
Confidence 4689999999999999999999999988753224689999999999998888754221100 00111 11123445999
Q ss_pred cHHHHhhhcccCCceEEEEEcCCCC-CChHHHHHHHHHhhcCCCeEEEeeeeeeec--------CCCChHHHHHh-hhhh
Q 011596 299 NLKSAMNCSYVKDYEFVAIFDADFQ-PNPDFLRRTVPHFKDNEELGLVQARWSFVN--------KDENLLTRLQD-INLS 368 (482)
Q Consensus 299 aln~al~~~~~a~~d~Vl~lDaD~~-~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n--------~~~~~~~~~~~-~~~~ 368 (482)
|+|.|++ .+++|||+++|+|+. ++|+++.+++..+..+|++++|.+...... ...+..+++.. ..+.
T Consensus 106 A~~~g~~---~a~gd~vv~lDaD~~~~~p~~l~~l~~~l~~~~~~~~V~g~~~r~~~~~~~~~~~~~gr~~~~~~~~l~~ 182 (306)
T PRK13915 106 ALWRSLA---ATTGDIVVFVDADLINFDPMFVPGLLGPLLTDPGVHLVKAFYRRPLRVSGGVDATGGGRVTELVARPLLN 182 (306)
T ss_pred HHHHHHH---hcCCCEEEEEeCccccCCHHHHHHHHHHHHhCCCceEEEEEeccccccccccCcCCCCchHHHHHHHHHH
Confidence 9999998 689999999999996 899999999999976789999988532211 00111111110 0010
Q ss_pred hhhhhhhhhccccccccccccceEeeeHHHHHHcCCCCCCCchhHHHHHHHHHH-CCC-cEEEec
Q 011596 369 FHFEVEQQVNGVFINFFGFNGTAGVWRIKALEDSGGWMERTTVEDMDIAVRAHL-RGW-KFIFLN 431 (482)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~iGgf~~~~~~ED~~l~~rl~~-~G~-ki~~~~ 431 (482)
..... ........+...++||++++++. |.+ .+..|.++...+.. .|. ++..++
T Consensus 183 ~~~~~-------l~~i~dp~sG~~a~rr~~l~~l~-~~~-~yg~e~~~l~~~~~~~g~~~i~~V~ 238 (306)
T PRK13915 183 LLRPE-------LAGFVQPLGGEYAGRRELLESLP-FVP-GYGVEIGLLIDTLDRLGLDAIAQVD 238 (306)
T ss_pred HHHHh-------hhcccCcchHhHHHHHHHHHhCC-CCC-CCeehHHHHHHHHHHhCcCceEEEE
Confidence 00000 00111122334789999999984 654 35567888888764 576 676666
|
|
| >cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1 | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.8e-17 Score=149.27 Aligned_cols=177 Identities=16% Similarity=0.160 Sum_probs=122.9
Q ss_pred EEeecCCchHHHHHHHHHHHhCCCC-CCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHH
Q 011596 225 VQIPMCNEKEVYQQSIAAVCNLDWP-KSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSA 303 (482)
Q Consensus 225 ViIP~yne~~~l~~tL~Sll~q~yp-~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~a 303 (482)
|+||+||+++.+.++++++.++... ...++|+|+||+|+|.+.+++++..++.+ ++.+....++.| +++++|.|
T Consensus 1 viIp~~n~~~~l~~~l~sl~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~----~i~~i~~~~n~G-~~~a~n~g 75 (181)
T cd04187 1 IVVPVYNEEENLPELYERLKAVLESLGYDYEIIFVDDGSTDRTLEILRELAARDP----RVKVIRLSRNFG-QQAALLAG 75 (181)
T ss_pred CEEeecCchhhHHHHHHHHHHHHHhcCCCeEEEEEeCCCCccHHHHHHHHHhhCC----CEEEEEecCCCC-cHHHHHHH
Confidence 6899999999999998888764431 22478999999999999888877655432 334443344444 99999999
Q ss_pred hhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHHHHhhhhhhhhhhhhhhcccccc
Q 011596 304 MNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQQVNGVFIN 383 (482)
Q Consensus 304 l~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (482)
++ .+.+|||+++|+|+.++|++|++++..+. ++.++|.+.....+ .++..+.....+.... ..... ..
T Consensus 76 ~~---~a~~d~i~~~D~D~~~~~~~l~~l~~~~~--~~~~~v~g~~~~~~--~~~~~~~~~~~~~~~~---~~~~~--~~ 143 (181)
T cd04187 76 LD---HARGDAVITMDADLQDPPELIPEMLAKWE--EGYDVVYGVRKNRK--ESWLKRLTSKLFYRLI---NKLSG--VD 143 (181)
T ss_pred HH---hcCCCEEEEEeCCCCCCHHHHHHHHHHHh--CCCcEEEEEecCCc--chHHHHHHHHHHHHHH---HHHcC--CC
Confidence 99 58899999999999999999999999864 45566776654433 3443333222111111 11111 12
Q ss_pred ccccccceEeeeHHHHHHcCCCCCC-CchhHHHHHH
Q 011596 384 FFGFNGTAGVWRIKALEDSGGWMER-TTVEDMDIAV 418 (482)
Q Consensus 384 ~~~~~G~~~~~Rr~~l~~iGgf~~~-~~~ED~~l~~ 418 (482)
.....|+..++||++++++|+|++. ...+|.+.++
T Consensus 144 ~~~~~~~~~~~~r~~~~~i~~~d~~~~~~~~~~~~~ 179 (181)
T cd04187 144 IPDNGGDFRLMDRKVVDALLLLPERHRFLRGLIAWV 179 (181)
T ss_pred CCCCCCCEEEEcHHHHHHHHhcCCCCccHHHHHHHh
Confidence 2224677889999999999999876 5567776654
|
A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily. |
| >PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.8e-15 Score=152.15 Aligned_cols=193 Identities=17% Similarity=0.178 Sum_probs=128.6
Q ss_pred CCeEEEEeecCCchHHHHHHHHHHHh---CCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCc
Q 011596 220 FPMVLVQIPMCNEKEVYQQSIAAVCN---LDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYK 296 (482)
Q Consensus 220 ~P~VsViIP~yne~~~l~~tL~Sll~---q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~K 296 (482)
.+++||+||+|||++.+.++++++.+ |..+ .+||+|+||+|+|.|.+++++..+ ..+.+++..... ++.||
T Consensus 5 ~~~vSVVIP~yNE~~~i~~~l~~l~~~~~~~~~--~~EIIvVDDgS~D~T~~il~~~~~---~~~~~v~~i~~~-~n~G~ 78 (325)
T PRK10714 5 IKKVSVVIPVYNEQESLPELIRRTTAACESLGK--EYEILLIDDGSSDNSAEMLVEAAQ---APDSHIVAILLN-RNYGQ 78 (325)
T ss_pred CCeEEEEEcccCchhhHHHHHHHHHHHHHhCCC--CEEEEEEeCCCCCcHHHHHHHHHh---hcCCcEEEEEeC-CCCCH
Confidence 46799999999999999999887753 4333 478999999999999998876554 223444443333 34459
Q ss_pred cccHHHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHHHHhhhhhhhhhhhhh
Q 011596 297 AGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQQ 376 (482)
Q Consensus 297 a~aln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~ 376 (482)
+.|++.|++ .+++|+++++|+|.+.+|+.+.+++..+++ +.++|.+... +...+++.+..+..+. .....
T Consensus 79 ~~A~~~G~~---~A~gd~vv~~DaD~q~~p~~i~~l~~~~~~--~~DvV~~~r~--~~~~~~~r~~~s~~~~---~l~~~ 148 (325)
T PRK10714 79 HSAIMAGFS---HVTGDLIITLDADLQNPPEEIPRLVAKADE--GYDVVGTVRQ--NRQDSWFRKTASKMIN---RLIQR 148 (325)
T ss_pred HHHHHHHHH---hCCCCEEEEECCCCCCCHHHHHHHHHHHHh--hCCEEEEEEc--CCCCcHHHHHHHHHHH---HHHHH
Confidence 999999999 589999999999999999999999999974 3456766542 2334444443322111 11111
Q ss_pred hccccccccccccceEeeeHHHHHHcCCCCCCCchhHHHHHHHHHHCCCcEEEeccce
Q 011596 377 VNGVFINFFGFNGTAGVWRIKALEDSGGWMERTTVEDMDIAVRAHLRGWKFIFLNDVE 434 (482)
Q Consensus 377 ~~~~~~~~~~~~G~~~~~Rr~~l~~iGgf~~~~~~ED~~l~~rl~~~G~ki~~~~~~~ 434 (482)
..+. .........-+++|++++++-.+.+.. ..+...+...|+++..+|-..
T Consensus 149 ~~g~--~~~d~~~gfr~~~r~~~~~l~~~~~~~----~~~~~l~~~~g~~i~evpv~~ 200 (325)
T PRK10714 149 TTGK--AMGDYGCMLRAYRRHIVDAMLHCHERS----TFIPILANTFARRAIEIPVHH 200 (325)
T ss_pred HcCC--CCCCCCcCeEEEcHHHHHHHHHCCCCc----cHHHHHHHHcCCCEEEEEeEe
Confidence 1111 111122234589999999874433322 123345567799999888654
|
|
| >cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold | Back alignment and domain information |
|---|
Probab=99.64 E-value=4.8e-15 Score=129.69 Aligned_cols=153 Identities=22% Similarity=0.291 Sum_probs=123.9
Q ss_pred EEeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHh
Q 011596 225 VQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAM 304 (482)
Q Consensus 225 ViIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al 304 (482)
|+||++|+.+.+..+++|+.+|+++. .+|+|+||++++.+.+.+++.... .......... .+++++.++|.++
T Consensus 1 iii~~~~~~~~l~~~l~s~~~~~~~~--~~i~i~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~-~~~g~~~~~~~~~ 73 (156)
T cd00761 1 VIIPAYNEEPYLERCLESLLAQTYPN--FEVIVVDDGSTDGTLEILEEYAKK----DPRVIRVINE-ENQGLAAARNAGL 73 (156)
T ss_pred CEEeecCcHHHHHHHHHHHHhCCccc--eEEEEEeCCCCccHHHHHHHHHhc----CCCeEEEEec-CCCChHHHHHHHH
Confidence 68999999999999999999999855 668899999998888777655432 1223333333 4445999999999
Q ss_pred hhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHHHHhhhhhhhhhhhhhhccccccc
Q 011596 305 NCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQQVNGVFINF 384 (482)
Q Consensus 305 ~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (482)
+ ..++|+++++|+|..++|+++..++..+..+++.+++++.
T Consensus 74 ~---~~~~d~v~~~d~D~~~~~~~~~~~~~~~~~~~~~~~v~~~------------------------------------ 114 (156)
T cd00761 74 K---AARGEYILFLDADDLLLPDWLERLVAELLADPEADAVGGP------------------------------------ 114 (156)
T ss_pred H---HhcCCEEEEECCCCccCccHHHHHHHHHhcCCCceEEecc------------------------------------
Confidence 9 4689999999999999999999987777667888888776
Q ss_pred cccccceEeeeHHHHHHcCCCCCCCc--hhHHHHHHHHHHCCCcEE
Q 011596 385 FGFNGTAGVWRIKALEDSGGWMERTT--VEDMDIAVRAHLRGWKFI 428 (482)
Q Consensus 385 ~~~~G~~~~~Rr~~l~~iGgf~~~~~--~ED~~l~~rl~~~G~ki~ 428 (482)
++++++++.++++|++.+... .||.++..++...|+...
T Consensus 115 -----~~~~~~~~~~~~~~~~~~~~~~~~ed~~~~~~~~~~g~~~~ 155 (156)
T cd00761 115 -----GNLLFRRELLEEIGGFDEALLSGEEDDDFLLRLLRGGKVAF 155 (156)
T ss_pred -----chheeeHHHHHHhCCcchHhcCCcchHHHHHHHHhhccccc
Confidence 578899999999999876643 599999999999887653
|
Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als |
| >KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.2e-14 Score=128.57 Aligned_cols=202 Identities=16% Similarity=0.157 Sum_probs=138.4
Q ss_pred CeEEEEeecCCchHHHHHHHHHHHhCCCC--CCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccc
Q 011596 221 PMVLVQIPMCNEKEVYQQSIAAVCNLDWP--KSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAG 298 (482)
Q Consensus 221 P~VsViIP~yne~~~l~~tL~Sll~q~yp--~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~ 298 (482)
++.||++|+|||.+.+.-++.-+.+ ..+ ..+.+|||+||+|.|.|.+.+++++..+...++. ..+|....| -+.
T Consensus 3 ~kYsvilPtYnEk~Nlpi~~~li~~-~~~e~~~~~eiIivDD~SpDGt~~~a~~L~k~yg~d~i~--l~pR~~klG-Lgt 78 (238)
T KOG2978|consen 3 IKYSVILPTYNEKENLPIITRLIAK-YMSEEGKKYEIIIVDDASPDGTQEVAKALQKIYGEDNIL--LKPRTKKLG-LGT 78 (238)
T ss_pred cceeEEeccccCCCCCeeeHHHHHh-hhhhhcCceEEEEEeCCCCCccHHHHHHHHHHhCCCcEE--EEeccCccc-chH
Confidence 5689999999999777644443332 122 3368899999999999999999988877665554 445555555 677
Q ss_pred cHHHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCC-Ch--HHHHHhhhhhhhhhhhh
Q 011596 299 NLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDE-NL--LTRLQDINLSFHFEVEQ 375 (482)
Q Consensus 299 aln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~-~~--~~~~~~~~~~~~~~~~~ 375 (482)
|.-+|+. .++++|++++|||-..+|.++.+++...++ .+.++|.|.....+..- .| ..+..+...++. .+
T Consensus 79 Ay~hgl~---~a~g~fiviMDaDlsHhPk~ipe~i~lq~~-~~~div~GTRYa~~ggV~gW~mkRk~IS~gAn~l---a~ 151 (238)
T KOG2978|consen 79 AYIHGLK---HATGDFIVIMDADLSHHPKFIPEFIRLQKE-GNYDIVLGTRYAGGGGVYGWDMKRKIISRGANFL---AR 151 (238)
T ss_pred HHHhhhh---hccCCeEEEEeCccCCCchhHHHHHHHhhc-cCcceeeeeeEcCCCceecchhhHHHHhhhhHHH---HH
Confidence 8888998 589999999999999999999999998874 67788888765443321 11 111111111100 01
Q ss_pred hhccccccccccccceEeeeHHHHHHcCC-CCCCCchhHHHHHHHHHHCCCcEEEecccee
Q 011596 376 QVNGVFINFFGFNGTAGVWRIKALEDSGG-WMERTTVEDMDIAVRAHLRGWKFIFLNDVEC 435 (482)
Q Consensus 376 ~~~~~~~~~~~~~G~~~~~Rr~~l~~iGg-f~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~ 435 (482)
..- ..++..++|++-++|+++++..-. -......--+++..|+.++||.+.-+|-+.+
T Consensus 152 ~ll--~~~~sdltGsFrLykk~vl~~li~e~vSkGyvfqmEll~ra~~~~y~IgEvPitFv 210 (238)
T KOG2978|consen 152 ILL--NPGVSDLTGSFRLYKKEVLEKLIEESVSKGYVFQMELLARARQHGYTIGEVPITFV 210 (238)
T ss_pred Hhc--cCCCccCcceeeeehHHHHHhhHHHhhccchhhhHHHHHhccccCceEeecceEEE
Confidence 111 123444799999999999987510 0111233467888899999999999887773
|
|
| >KOG2571 consensus Chitin synthase/hyaluronan synthase (glycosyltransferases) [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.58 E-value=3.1e-14 Score=153.42 Aligned_cols=150 Identities=20% Similarity=0.369 Sum_probs=133.5
Q ss_pred cCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHHHHhhhhhhhhhhhhhhccccccccccc
Q 011596 309 VKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQQVNGVFINFFGFN 388 (482)
Q Consensus 309 ~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (482)
...-+||+++|+|+.+.|+.+.+|+..|+.||+||.++| ...+..++++.-.|+++|...........+.++.+.+..
T Consensus 438 ~~~v~~il~vD~dT~~~P~ai~~lv~~f~~dp~VggaCG--~I~~~~~~w~v~~Q~FEY~Ish~l~Ka~ESvFG~VsclP 515 (862)
T KOG2571|consen 438 MPSVDYILVVDADTRLDPDALYHLVKVFDEDPQVGGACG--RILNKGGSWVVAYQNFEYAISHNLQKATESVFGCVSCLP 515 (862)
T ss_pred cCcceEEEEecCCCccCcHHHHHHHHHhccCcccceecc--ccccCCCceEEeHHHHHHHHHHHHHHhhhhhceeEEecC
Confidence 355679999999999999999999999999999999999 567777888988999999999999999999999999999
Q ss_pred cceEeeeHHHHHHcC----------C---CCCCCchhHHHHHHHHHHCCCcEEEeccceecccCCcCHHHHHHHHHhhhh
Q 011596 389 GTAGVWRIKALEDSG----------G---WMERTTVEDMDIAVRAHLRGWKFIFLNDVECQCELPESYEAYRKQQHRWHS 455 (482)
Q Consensus 389 G~~~~~Rr~~l~~iG----------g---f~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~~~~~qr~RW~~ 455 (482)
|+.+++|.+++.+-- + ......+||..++.++..+||.+.|++.+.+.++.|+++.+++.||+||..
T Consensus 516 Gcfs~yR~~aL~~~~~~~~y~~~~~~~~~~~~~~~geDR~L~~~llskgy~l~Y~a~s~a~t~~Pe~~~efl~QrrRW~~ 595 (862)
T KOG2571|consen 516 GCFSLYRASALMDQFVEYFYGEKFSGPRHGIQYSLGEDRWLCTLLLSKGYRLKYVAASDAETEAPESFLEFLNQRRRWLN 595 (862)
T ss_pred chhHHHHHHHHhcchHHhhhchhhcCcccccccccchhHHHHHHHHhccceeeeeccccccccCcHhHHHHHHHhhhhcc
Confidence 999999998887631 0 111247899999999999999999999999999999999999999999999
Q ss_pred hhHHH
Q 011596 456 GPMQL 460 (482)
Q Consensus 456 G~~q~ 460 (482)
|.+..
T Consensus 596 s~f~~ 600 (862)
T KOG2571|consen 596 SIFNA 600 (862)
T ss_pred cchhH
Confidence 94443
|
|
| >cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide | Back alignment and domain information |
|---|
Probab=99.49 E-value=3.1e-13 Score=129.27 Aligned_cols=104 Identities=19% Similarity=0.177 Sum_probs=87.7
Q ss_pred eEEEEeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHH
Q 011596 222 MVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLK 301 (482)
Q Consensus 222 ~VsViIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln 301 (482)
+|||+||+|||++.+++||+|+..|. -+|+|+||+|+|.|.++++ ..+++++.. .+++.+.+.|
T Consensus 1 ~isvii~~~Ne~~~l~~~l~sl~~~~-----~eiivvD~gStD~t~~i~~-------~~~~~v~~~----~~~g~~~~~n 64 (229)
T cd02511 1 TLSVVIITKNEERNIERCLESVKWAV-----DEIIVVDSGSTDRTVEIAK-------EYGAKVYQR----WWDGFGAQRN 64 (229)
T ss_pred CEEEEEEeCCcHHHHHHHHHHHhccc-----CEEEEEeCCCCccHHHHHH-------HcCCEEEEC----CCCChHHHHH
Confidence 48999999999999999999998873 1689999999999988876 456776533 3444889999
Q ss_pred HHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEE
Q 011596 302 SAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGL 344 (482)
Q Consensus 302 ~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~ 344 (482)
.|+. .+.+|||+++|+|..++|++++++...+..+|..+.
T Consensus 65 ~~~~---~a~~d~vl~lDaD~~~~~~~~~~l~~~~~~~~~~~~ 104 (229)
T cd02511 65 FALE---LATNDWVLSLDADERLTPELADEILALLATDDYDGY 104 (229)
T ss_pred HHHH---hCCCCEEEEEeCCcCcCHHHHHHHHHHHhCCCCcEE
Confidence 9999 689999999999999999999999999987665333
|
UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core. |
| >COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.5e-12 Score=119.32 Aligned_cols=106 Identities=23% Similarity=0.255 Sum_probs=86.7
Q ss_pred CCeEEEEeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCcccc
Q 011596 220 FPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGN 299 (482)
Q Consensus 220 ~P~VsViIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~a 299 (482)
.|.+||+||+||+++.+.++|+|+++|+|++ .+|+|+||+|+|.+.+++++...+. ..+... ....++|+..+
T Consensus 2 ~~~~siiip~~n~~~~l~~~l~s~~~q~~~~--~eiivvddgs~d~t~~~~~~~~~~~----~~~~~~-~~~~~~g~~~~ 74 (291)
T COG0463 2 MPKVSVVIPTYNEEEYLPEALESLLNQTYKD--FEIIVVDDGSTDGTTEIAIEYGAKD----VRVIRL-INERNGGLGAA 74 (291)
T ss_pred CccEEEEEeccchhhhHHHHHHHHHhhhhcc--eEEEEEeCCCCCChHHHHHHHhhhc----ceEEEe-ecccCCChHHH
Confidence 5789999999999999999999999999987 6699999999999999888765532 223332 33345559999
Q ss_pred HHHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHh
Q 011596 300 LKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHF 336 (482)
Q Consensus 300 ln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f 336 (482)
+|.++. .+.+|++.++|+|.. .++.+..+....
T Consensus 75 ~~~~~~---~~~~~~~~~~d~d~~-~~~~~~~~~~~~ 107 (291)
T COG0463 75 RNAGLE---YARGDYIVFLDADDQ-HPPELIPLVAAG 107 (291)
T ss_pred HHhhHH---hccCCEEEEEccCCC-CCHHHHHHHHHh
Confidence 999999 577899999999999 888888855444
|
|
| >KOG3738 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.15 E-value=7.4e-11 Score=115.59 Aligned_cols=206 Identities=17% Similarity=0.174 Sum_probs=142.3
Q ss_pred CCCCCeEEEEeecCCch-HHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHH-HHHHHHHHHHhhhCCCeEEEEeccCCCC
Q 011596 217 KGFFPMVLVQIPMCNEK-EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTA-QTLIKEEVLKWQEAGANIVYRHRILRDG 294 (482)
Q Consensus 217 ~~~~P~VsViIP~yne~-~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t-~~~~~~~~~~~~~~~v~vv~~~~~~~~g 294 (482)
..++|..||||+-+||+ ..+-+|+.|+++++-++--.|||+|||.|.|.. -..+. +++ .+++ .+...+.|
T Consensus 120 ~~dlp~TsviITfHNEARS~LLRTv~SvlnrsP~~li~EiILVDD~S~Dped~~~L~----ri~--kvr~--LRN~~ReG 191 (559)
T KOG3738|consen 120 KVDLPPTSVIITFHNEARSTLLRTVVSVLNRSPEHLIHEIILVDDFSQDPEDGKLLK----RIP--KVRV--LRNNEREG 191 (559)
T ss_pred ecCCCCceEEEEeccHHHHHHHHHHHHHHcCChHHhhheeEEecCCCCChHHHHHHh----hhh--eeee--ecccchhh
Confidence 34789999999999998 899999999999885554558999999766543 22222 222 3443 33444455
Q ss_pred CccccHHHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCC-ChHHHHH----hhhhhh
Q 011596 295 YKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDE-NLLTRLQ----DINLSF 369 (482)
Q Consensus 295 ~Ka~aln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~-~~~~~~~----~~~~~~ 369 (482)
-....+.|.+ .+++.++.|+|+.|.++.+||+-++...++|+. .+|+......|.+. +....-. .+.+..
T Consensus 192 -LirSRvrGAd---vA~a~vltFLDSHcEvN~~WLePLL~Rvaed~t-rvVsPiiDvIn~dnf~Y~~asadLrGGFDWsL 266 (559)
T KOG3738|consen 192 -LIRSRVRGAD---VAQATVLTFLDSHCEVNEGWLEPLLERVAEDTT-RVVSPIIDVINLDNFSYVGASADLRGGFDWSL 266 (559)
T ss_pred -hhhhhccccc---cccceEEEEEecceeecchhhHHHHHHHhhccc-ceeecccccccccccccccchhhhcCCcceEE
Confidence 5555566666 789999999999999999999999999997654 56666666666542 1111111 112222
Q ss_pred hhhhhh----hhccc-----cccccccccceEeeeHHHHHHcCCCCCC---CchhHHHHHHHHHHCCCcEEEecccee
Q 011596 370 HFEVEQ----QVNGV-----FINFFGFNGTAGVWRIKALEDSGGWMER---TTVEDMDIAVRAHLRGWKFIFLNDVEC 435 (482)
Q Consensus 370 ~~~~~~----~~~~~-----~~~~~~~~G~~~~~Rr~~l~~iGgf~~~---~~~ED~~l~~rl~~~G~ki~~~~~~~~ 435 (482)
++...+ +-.+. -.....+.|.-+++.++.|.+.|.|+.. -.+|.++++.|+...|..+..+|-..+
T Consensus 267 hF~We~~~~eqr~sr~~Pt~PirtP~iAGGlfvidk~wF~~LGkyd~~mdiWGGEn~ElsfrvW~CGGslEIvPCSRV 344 (559)
T KOG3738|consen 267 HFKWEQMQLEQRESRADPTAPIRTPAIAGGLFVIDKEWFNELGKYDMDMDIWGGENLELSFRVWQCGGSLEIVPCSRV 344 (559)
T ss_pred EEEehhcCHHHHhhccCCCCcccCccccceeEEecHHHHHHhcccCccccccCCcceEEEEEEEeeCCeeEEEeccch
Confidence 222211 11111 1123347899999999999999999776 346999999999999999999887663
|
|
| >cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides | Back alignment and domain information |
|---|
Probab=99.14 E-value=8.4e-10 Score=110.02 Aligned_cols=181 Identities=19% Similarity=0.263 Sum_probs=116.4
Q ss_pred EEEEeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEecc--CCCC------
Q 011596 223 VLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRI--LRDG------ 294 (482)
Q Consensus 223 VsViIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~--~~~g------ 294 (482)
+.|+|.+||.++.+++||+|+++|.......+|+|.+||+++.+.+.++.+. ..++++..... .+.|
T Consensus 2 ~PVlv~ayNRp~~l~r~LesLl~~~p~~~~~~liIs~DG~~~~~~~~v~~~~-----~~i~~i~~~~~~~~~~~~~~~~~ 76 (334)
T cd02514 2 IPVLVIACNRPDYLRRMLDSLLSYRPSAEKFPIIVSQDGGYEEVADVAKSFG-----DGVTHIQHPPISIKNVNPPHKFQ 76 (334)
T ss_pred cCEEEEecCCHHHHHHHHHHHHhccccCCCceEEEEeCCCchHHHHHHHhhc-----cccEEEEcccccccccCcccccc
Confidence 5799999999999999999999985223346789999999887776665431 23443321110 0111
Q ss_pred ---Cccc----cHHHHhhhcccCCceEEEEEcCCCCCChH---HHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHHHHh
Q 011596 295 ---YKAG----NLKSAMNCSYVKDYEFVAIFDADFQPNPD---FLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQD 364 (482)
Q Consensus 295 ---~Ka~----aln~al~~~~~a~~d~Vl~lDaD~~~~pd---~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~~~~ 364 (482)
+-+. ++|.++. ..++++++++|+|+.+.|| +++.+++.++.|+.+.+|++.-. |....... .
T Consensus 77 ~y~~ia~hyk~aln~vF~---~~~~~~vIILEDDl~~sPdFf~yf~~~l~~y~~D~~v~~ISa~Nd--nG~~~~~~---~ 148 (334)
T cd02514 77 GYYRIARHYKWALTQTFN---LFGYSFVIILEDDLDIAPDFFSYFQATLPLLEEDPSLWCISAWND--NGKEHFVD---D 148 (334)
T ss_pred hhhHHHHHHHHHHHHHHH---hcCCCEEEEECCCCccCHhHHHHHHHHHHHHhcCCCEEEEEeecc--CCcccccC---C
Confidence 0122 6777776 4579999999999999999 55888888888999999998632 11000000 0
Q ss_pred hhhhhhhhhhhhhccccccccccccceEeeeHHHHHHcC-CCCCCCchhHHHHHHHH--HHCCCcEEEeccc
Q 011596 365 INLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEDSG-GWMERTTVEDMDIAVRA--HLRGWKFIFLNDV 433 (482)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~iG-gf~~~~~~ED~~l~~rl--~~~G~ki~~~~~~ 433 (482)
. .........+.|.+-+++|+++++.. .|.. -|+|.++|. .++|...+. |++
T Consensus 149 -------~-----~~~lyrs~ff~glGWml~r~~W~e~~~~wp~----~~WD~w~R~~~~rkgr~cir-Pei 203 (334)
T cd02514 149 -------T-----PSLLYRTDFFPGLGWMLTRKLWKELEPKWPK----AFWDDWMRLPEQRKGRECIR-PEI 203 (334)
T ss_pred -------C-----cceEEEecCCCchHHHHHHHHHHHhCCCCCC----CChHHhhcchhhhcCCcccc-CCc
Confidence 0 00111111256778888999998873 2322 488888885 556754443 443
|
Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13. |
| >KOG2977 consensus Glycosyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.11 E-value=7.6e-09 Score=97.94 Aligned_cols=207 Identities=15% Similarity=0.118 Sum_probs=124.7
Q ss_pred eEEEEeecCCchH----HHHHHHHHHHhCCC---CCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCC
Q 011596 222 MVLVQIPMCNEKE----VYQQSIAAVCNLDW---PKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDG 294 (482)
Q Consensus 222 ~VsViIP~yne~~----~l~~tL~Sll~q~y---p~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g 294 (482)
-.|||||+|||+. .+..|++++.+ .| |+.+++|+|+||+|.|+|.+++-++..++....+++. ....|.|
T Consensus 68 ~lsVIVpaynE~~ri~~mldeav~~le~-ry~~~~~F~~eiiVvddgs~d~T~~~a~k~s~K~~~d~irV~--~l~~nrg 144 (323)
T KOG2977|consen 68 YLSVIVPAYNEEGRIGAMLDEAVDYLEK-RYLSDKSFTYEIIVVDDGSTDSTVEVALKFSRKLGDDNIRVI--KLKKNRG 144 (323)
T ss_pred eeEEEEecCCcccchHHHHHHHHHHHHH-HhccCCCCceeEEEeCCCCchhHHHHHHHHHHHcCcceEEEe--ehhccCC
Confidence 5899999999994 45555555543 33 4478999999999999999999888877666666655 2334555
Q ss_pred CccccHHHHhhhcccCCceEEEEEcCCC--CC-ChHHHHHHHHHhhc-CCCeEEEeeee-eeecCCCChHHH-HH-hhh-
Q 011596 295 YKAGNLKSAMNCSYVKDYEFVAIFDADF--QP-NPDFLRRTVPHFKD-NEELGLVQARW-SFVNKDENLLTR-LQ-DIN- 366 (482)
Q Consensus 295 ~Ka~aln~al~~~~~a~~d~Vl~lDaD~--~~-~pd~L~~lv~~f~~-~p~v~~V~~~~-~~~n~~~~~~~~-~~-~~~- 366 (482)
|+++...|+. .+.|++++|.|||- .+ +-..|++.+..... .++-+++.|.. ...|. +....+ +. ++-
T Consensus 145 -KGgAvR~g~l---~~rG~~ilfadAdGaTkf~d~ekLe~al~~~~~p~~r~~va~GsrahLe~~-~a~a~rs~~r~iLM 219 (323)
T KOG2977|consen 145 -KGGAVRKGML---SSRGQKILFADADGATKFADLEKLEKALNDKAGPGPRDDVACGSRAHLENT-EAVAKRSVIRNILM 219 (323)
T ss_pred -CCcceehhhH---hccCceEEEEcCCCCccCCCHHHHHHHHHhhcCCCCCCceeecCHHHhhcc-HHHHHHhHhhHHHH
Confidence 9999999988 58999999999995 33 45667777765552 23333444433 22231 111111 11 111
Q ss_pred hhhhhhhhhh-hccccccccccccceEeeeHHHHHHcCCCCCC-CchhHHHHHHHHHHCCCcEEEeccceecccCCcC
Q 011596 367 LSFHFEVEQQ-VNGVFINFFGFNGTAGVWRIKALEDSGGWMER-TTVEDMDIAVRAHLRGWKFIFLNDVECQCELPES 442 (482)
Q Consensus 367 ~~~~~~~~~~-~~~~~~~~~~~~G~~~~~Rr~~l~~iGgf~~~-~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t 442 (482)
+.+|..+.-. ..+..... +| +.++.|.+.+.+=.+... ..+-|.++-..+...+-.+.-++- -++|.+.|
T Consensus 220 ~gFH~lv~~~a~rsI~DTQ---cg-fklftR~aa~~if~~lh~e~W~fdvEll~La~~~~ipi~ei~v--~w~EIdgS 291 (323)
T KOG2977|consen 220 YGFHKLVWIFAIRSIRDTQ---CG-FKLFTRAAARRIFPWLHVERWAFDVELLYLAKRFTIPIKEIPV--EWTEIDGS 291 (323)
T ss_pred HHHHHHHHHHhcCcccccc---hh-HHHhHHHHHHhhcchhheeeeeccHHHHHHHHHcCCCcEEeee--EEEEcCCc
Confidence 1222222111 11211111 12 356788888876332211 235688888888877777666543 34555544
|
|
| >KOG3736 consensus Polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.10 E-value=5.8e-11 Score=124.60 Aligned_cols=254 Identities=14% Similarity=0.183 Sum_probs=168.2
Q ss_pred CCCeEEEEeecCCch-HHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHH-HHHHHHHHHHhhhCCCeEEEEeccCCCCCc
Q 011596 219 FFPMVLVQIPMCNEK-EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTA-QTLIKEEVLKWQEAGANIVYRHRILRDGYK 296 (482)
Q Consensus 219 ~~P~VsViIP~yne~-~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t-~~~~~~~~~~~~~~~v~vv~~~~~~~~g~K 296 (482)
.+|.+||||+-+||. .++.+++-|+.+.+-+.---||++|||+|+... .+.++++++.+.. +.+.+...+.| .
T Consensus 140 ~Lp~~Svii~f~nE~~s~llRtv~Svi~rtp~~lLkEIiLVdD~S~~~~l~~~Ld~y~k~~~~----v~i~r~~~R~G-L 214 (578)
T KOG3736|consen 140 KLPTTSVIIIFHNEAWSTLLRTVHSVINRTPPYLLKEIILVDDFSDRDHLKDKLEEYVKRFSK----VRILRTKKREG-L 214 (578)
T ss_pred ccCCCceEEEEecCCCcchhheEEeehccCChhHeEEEEEeecCcchhhhhhhhHHHHhhhcc----eeEEeecchhh-h
Confidence 589999999999998 899999999999775544568999999877665 5556666665543 33444555666 8
Q ss_pred cccHHHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHH-----HHhhhhhhhh
Q 011596 297 AGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTR-----LQDINLSFHF 371 (482)
Q Consensus 297 a~aln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~-----~~~~~~~~~~ 371 (482)
..|...|-+ .+.+|+++|+|+-+....+||+-++..+..+.. .+|+......+.+.--+.. ...+.+.+++
T Consensus 215 IrARl~GA~---~A~geVL~FLDsHcE~n~gWLePLL~~I~~~r~-tvv~PvID~Id~~tf~y~~~~~~~rGgFdW~l~f 290 (578)
T KOG3736|consen 215 IRARLLGAS---MATGEVLTFLDSHCEVNVGWLEPLLARIAEDRK-TVVCPVIDVIDDNTFEYEKQSELMRGGFDWELTF 290 (578)
T ss_pred HHHHhhhhh---hhhchheeeeecceeEecCcchHHHHHhhhcCc-eeecceEEeecCcCceecccCccceeeeecceeE
Confidence 788888877 799999999999999999999999999987543 4444444333322100110 1111222222
Q ss_pred hh--------hh-hhccccccccccccceEeeeHHHHHHcCCCCCC---CchhHHHHHHHHHHCCCcEEEeccceecc--
Q 011596 372 EV--------EQ-QVNGVFINFFGFNGTAGVWRIKALEDSGGWMER---TTVEDMDIAVRAHLRGWKFIFLNDVECQC-- 437 (482)
Q Consensus 372 ~~--------~~-~~~~~~~~~~~~~G~~~~~Rr~~l~~iGgf~~~---~~~ED~~l~~rl~~~G~ki~~~~~~~~~~-- 437 (482)
.. .+ .....-....++.|..+++.|+.|.++|+|+++ -.+|-.++++|+.+-|-++..+|-..+-+
T Consensus 291 ~w~~lP~~~~~~~~~~t~PirsPtMaGglFAI~r~yF~eiG~yD~gMdiwGGENlElSfrvWqCGG~lei~PCSrVGHif 370 (578)
T KOG3736|consen 291 KWERLPLPEEKRRELPTDPIRSPTMAGGLFAIDRKYFGELGSYDEGMDIWGGENLELSFRVWQCGGRLEIVPCSRVGHIF 370 (578)
T ss_pred EeccCCccHhhcccCCCCCcCCcccCCceEEeeHHHHhhccCccccccccChhhceeeEEEeccCCeEEecCccceeeee
Confidence 20 11 111112234457999999999999999999987 33699999999999999999999877433
Q ss_pred --cCCcCHHH----HHHHHHh----hhhhhHHHHHHhChhhhh-------cCcchhhcccc
Q 011596 438 --ELPESYEA----YRKQQHR----WHSGPMQLFRLCLPDIIR-------AKVYILSNTSC 481 (482)
Q Consensus 438 --~~p~t~~~----~~~qr~R----W~~G~~q~~~~~~~~i~~-------s~~~~~~k~~~ 481 (482)
..|.++.+ ..+-..| |..-+-..+.++.|.... .+..+.+|++|
T Consensus 371 Rk~~pY~~p~~~~~~~~N~~RlAeVWmDeyK~~~y~~~P~~~~~d~GDvseR~~LR~~L~C 431 (578)
T KOG3736|consen 371 RKRKPYTFPDGTDTATRNLKRLAEVWMDEYKEQFYKRMPGLRNIDEGDLTERKALRERLNC 431 (578)
T ss_pred ecCCCccCCCcchhhhhchhhhhhhhhHHHHHHHHhhCccccccCCCCchhHHHHHHhcCC
Confidence 23555433 2222233 554444555555544433 23455555555
|
|
| >KOG3737 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.06 E-value=5.1e-10 Score=109.48 Aligned_cols=210 Identities=14% Similarity=0.096 Sum_probs=140.1
Q ss_pred CCCCCeEEEEeecCCch-HHHHHHHHHHHhCCCCCCceEEEEEcCCC-CHHHHHHHHHHHHHhhhCCCeEEEEeccCCCC
Q 011596 217 KGFFPMVLVQIPMCNEK-EVYQQSIAAVCNLDWPKSKILIQVLDDSD-DPTAQTLIKEEVLKWQEAGANIVYRHRILRDG 294 (482)
Q Consensus 217 ~~~~P~VsViIP~yne~-~~l~~tL~Sll~q~yp~~~~~IiVvDdss-dd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g 294 (482)
+..+|.+||+|.-+||. ..+.+|+.|++..+-+..--+|+.+||-| .+...+-+.+++..|. | .+.+.+...+.|
T Consensus 151 pe~Lpt~SVviVFHNEGws~LmRTVHSVi~RsP~~~l~eivlvDDfSdKehLkekLDeYv~~fn--G-lVkV~Rne~REG 227 (603)
T KOG3737|consen 151 PENLPTSSVVIVFHNEGWSTLMRTVHSVIKRSPRKYLAEIVLVDDFSDKEHLKEKLDEYVKLFN--G-LVKVFRNERREG 227 (603)
T ss_pred cccCCcceEEEEEecCccHHHHHHHHHHHhcCcHHhhheEEEeccCCccHHHHHHHHHHHHHhc--C-EEEEEecchhhh
Confidence 44799999999999998 99999999999866444444677788754 4556777777777653 2 233333445555
Q ss_pred CccccHHHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEE------eeee-eeec--CCCChHHHHHhh
Q 011596 295 YKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLV------QARW-SFVN--KDENLLTRLQDI 365 (482)
Q Consensus 295 ~Ka~aln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V------~~~~-~~~n--~~~~~~~~~~~~ 365 (482)
-..+...|.+ .+.|++++|+||.|.+.-+||.-+++.+..|..+.-| -++. .+.. ..++-..+. .+
T Consensus 228 -LI~aRSiGA~---~atGeV~ifLDAHCEVntNWlpPLlAPI~rdRtvmTVP~IDgId~n~~EyrpvyG~dn~h~rG-if 302 (603)
T KOG3737|consen 228 -LIQARSIGAQ---KATGEVLIFLDAHCEVNTNWLPPLLAPISRDRTVMTVPLIDGIDGNTYEYRPVYGGDNDHARG-IF 302 (603)
T ss_pred -hhhhhccchh---hccccEEEEEecceeeecccccccccccccCceEEEEeeeeeecCCceEEeeccCCcchhhcc-hh
Confidence 4455555555 5799999999999999999999999999876554322 2211 1111 111211110 01
Q ss_pred hhhhhh---------hhhhhhccccccccccccceEeeeHHHHHHcCCCCCCC---chhHHHHHHHHHHCCCcEEEeccc
Q 011596 366 NLSFHF---------EVEQQVNGVFINFFGFNGTAGVWRIKALEDSGGWMERT---TVEDMDIAVRAHLRGWKFIFLNDV 433 (482)
Q Consensus 366 ~~~~~~---------~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~iGgf~~~~---~~ED~~l~~rl~~~G~ki~~~~~~ 433 (482)
++.+.+ ...+..++--....+..|..+++.|+.|.+.|.|++.. .+|.+++++.+.+.|-++.++|-.
T Consensus 303 eWgmLyKe~~~t~rE~r~RkhnsePyRSPthAGGLfAInRe~F~ELG~YDpgLqiWGGEnfElSfKIWQCGG~i~fVPCS 382 (603)
T KOG3737|consen 303 EWGMLYKEVPLTPREKRLRKHNSEPYRSPTHAGGLFAINREFFFELGLYDPGLQIWGGENFELSFKIWQCGGKILFVPCS 382 (603)
T ss_pred hhhheeccCCCCHHHHHhhhccCCCCCCcccccceeeehHHHHHHhccCCCcceeecCcceeEEEEEEeeCCEEEEEEcc
Confidence 111100 01111122222334468999999999999999999873 369999999999999999999976
Q ss_pred e
Q 011596 434 E 434 (482)
Q Consensus 434 ~ 434 (482)
.
T Consensus 383 r 383 (603)
T KOG3737|consen 383 R 383 (603)
T ss_pred c
Confidence 6
|
|
| >PF13712 Glyco_tranf_2_5: Glycosyltransferase like family; PDB: 2QGI_A 2NXV_B | Back alignment and domain information |
|---|
Probab=98.83 E-value=3.1e-08 Score=93.76 Aligned_cols=179 Identities=15% Similarity=0.187 Sum_probs=96.0
Q ss_pred EeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHhh
Q 011596 226 QIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMN 305 (482)
Q Consensus 226 iIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al~ 305 (482)
+|.++|.++.+++|++++.++..|+.. .+-+|+ ..+. .+.+.+.|.|++
T Consensus 3 iI~c~n~~~~~~~~~~~i~~~~~~~~~--~i~i~~----------------------------~~~~-~s~~~~yN~a~~ 51 (217)
T PF13712_consen 3 IIICVNDEELYEECLRSIKRLIGPPGE--LIEIDN----------------------------VRNA-KSMAAAYNEAME 51 (217)
T ss_dssp EEEEES-HHHHHHHHHHHHHTT--TEE--EEEEE-----------------------------SSS--S-TTTHHHHHGG
T ss_pred EEEEECCHHHHHHHHHHHHhhCCCCce--EEEEec----------------------------cCCC-cCHHHHHHHHHH
Confidence 455667777888899999999887732 322332 1112 237788999999
Q ss_pred hcccCCceEEEEEcCCCCC-ChHHHHHHHHHhhcCCCeEEEe--eeeeeecCCCChHHHHH----hhhhh--hh-hhh--
Q 011596 306 CSYVKDYEFVAIFDADFQP-NPDFLRRTVPHFKDNEELGLVQ--ARWSFVNKDENLLTRLQ----DINLS--FH-FEV-- 373 (482)
Q Consensus 306 ~~~~a~~d~Vl~lDaD~~~-~pd~L~~lv~~f~~~p~v~~V~--~~~~~~n~~~~~~~~~~----~~~~~--~~-~~~-- 373 (482)
.++++|++|++.|+.+ +++++..++..|+++|++|+++ |... ......++.... ...+. .+ ...
T Consensus 52 ---~a~~~ylvflHqDv~i~~~~~l~~il~~~~~~~~~G~iGvaG~~~-~~~~~~~w~~~~~~g~~~~~~~~~~~~~~~~ 127 (217)
T PF13712_consen 52 ---KAKAKYLVFLHQDVFIINENWLEDILEIFEEDPNIGMIGVAGSKR-LPPNGVWWESPNKVGKVREYGRIMHGHGPNS 127 (217)
T ss_dssp ---G--SSEEEEEETTEE-SSHHHHHHHHHHHHH-TTEEEEESEEEES-S-S-TTS---EEEEEETTEEEE----E----
T ss_pred ---hCCCCEEEEEeCCeEEcchhHHHHHHHHHhhCCCccEEEeecCCc-CCCCCcccccccccccccccccccccccccc
Confidence 6899999999999966 7899999999997789987775 2221 122122221110 00000 00 000
Q ss_pred --hhhh----ccccccccccccceEeeeHHHHHHcCCCCCCCc----hhHHHHHHHHHHCCCcEEEeccceecccCCcCH
Q 011596 374 --EQQV----NGVFINFFGFNGTAGVWRIKALEDSGGWMERTT----VEDMDIAVRAHLRGWKFIFLNDVECQCELPESY 443 (482)
Q Consensus 374 --~~~~----~~~~~~~~~~~G~~~~~Rr~~l~~iGgf~~~~~----~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~ 443 (482)
.... ......+-.+-|..++.+++++ +|++... .-|.++++++.++|+++ ++++..+.|....++
T Consensus 128 ~~~~~~~~~~~~~~~~V~avDg~ll~~~~dv~----~fde~~~~gfH~Ydvd~cl~~~~~G~~v-~~~~~~~~H~s~g~~ 202 (217)
T PF13712_consen 128 AGEVRYGGPRNDPPEEVQAVDGLLLATQKDVP----RFDEDLFTGFHFYDVDQCLEARRAGYRV-VVPPPWCIHFSGGSF 202 (217)
T ss_dssp ---------ES-SSEEEEEE-TTEEEEETTB---------SS--SSSSHHHHHHHHHHHTT-EE-EE-----EE-S----
T ss_pred cccccccccccCCceeEEEecceEEEEEcccC----CCCccccCCcchHHHHHHHHHHHhCCEE-EecCceEEEcCCCCc
Confidence 0000 1123345567999999999999 7777622 37999999999999988 667777777766654
Q ss_pred H
Q 011596 444 E 444 (482)
Q Consensus 444 ~ 444 (482)
.
T Consensus 203 ~ 203 (217)
T PF13712_consen 203 D 203 (217)
T ss_dssp S
T ss_pred c
Confidence 3
|
|
| >cd00899 b4GalT Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids | Back alignment and domain information |
|---|
Probab=98.12 E-value=2.6e-05 Score=73.09 Aligned_cols=177 Identities=14% Similarity=0.120 Sum_probs=107.8
Q ss_pred eEEEEeecCCchHHHHHHHHHHH----hCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCcc
Q 011596 222 MVLVQIPMCNEKEVYQQSIAAVC----NLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKA 297 (482)
Q Consensus 222 ~VsViIP~yne~~~l~~tL~Sll----~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka 297 (482)
+|+||||-+|.++.|...+..+. +|. -++.|+|++...+... .|+
T Consensus 3 ~~aiivpyr~R~~~l~~~l~~~~~~L~rq~---~~~~i~vi~Q~~~~~F----------------------------NR~ 51 (219)
T cd00899 3 KVAIIVPFRNRFEHLLIFLPHLHPFLQRQQ---LDYRIFVIEQVGNFRF----------------------------NRA 51 (219)
T ss_pred ceEEEEecCCHHHHHHHHHHHHHHHHHhcC---CcEEEEEEEecCCccc----------------------------hhh
Confidence 68999999999988877776543 232 2345666653222110 144
Q ss_pred ccHHHHhhhcc-cCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHHHHhhhhhhhhhhhhh
Q 011596 298 GNLKSAMNCSY-VKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQQ 376 (482)
Q Consensus 298 ~aln~al~~~~-~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~ 376 (482)
..+|.|+..+. ..+.|++++-|-|..|..+.+..- +.+.|.-..+.-. . ..+. .
T Consensus 52 ~llNvG~~~a~k~~~~dc~i~hDVDllP~~~~~~y~---~~~~p~H~s~~~~--------~-------~~~~--l----- 106 (219)
T cd00899 52 KLLNVGFLEALKDGDWDCFIFHDVDLLPENDRNLYG---CEEGPRHLSVPLD--------K-------FHYK--L----- 106 (219)
T ss_pred hhhhHHHHHHhhcCCccEEEEecccccccCcccccc---CCCCCeEEEEeec--------c-------cccc--c-----
Confidence 55666665431 234799999999999988875422 2222321111100 0 0000 0
Q ss_pred hccccccccccccceEeeeHHHHHHcCCCCCCCc---hhHHHHHHHHHHCCCcEEEecccee-----cc-cCC---cC--
Q 011596 377 VNGVFINFFGFNGTAGVWRIKALEDSGGWMERTT---VEDMDIAVRAHLRGWKFIFLNDVEC-----QC-ELP---ES-- 442 (482)
Q Consensus 377 ~~~~~~~~~~~~G~~~~~Rr~~l~~iGgf~~~~~---~ED~~l~~rl~~~G~ki~~~~~~~~-----~~-~~p---~t-- 442 (482)
...++.|++++++++.+.+++||++... .||.|+..|+..+|.++...+.... ++ +.+ .+
T Consensus 107 ------py~~~~Gg~~~~~k~~f~~VNGf~n~f~GWGgEDdd~~~Rl~~~g~~~~r~~~~~~~~~hL~H~~~~r~~~N~~ 180 (219)
T cd00899 107 ------PYKTYFGGVLALTREQFRKVNGFSNAYWGWGGEDDDLYNRIKAAGLKITRPSGDTGRYKMIRHIHDKRNRDNPN 180 (219)
T ss_pred ------CcccccccceeeEHHHHHHhCCcCCcCccCCcchHHHHHHHHHCCCeEEeccCcccceeeeecCCCcccccCHH
Confidence 1112578899999999999999998633 5999999999999999888765543 22 111 11
Q ss_pred -HHHHHHHHHhhhhhhHHH
Q 011596 443 -YEAYRKQQHRWHSGPMQL 460 (482)
Q Consensus 443 -~~~~~~qr~RW~~G~~q~ 460 (482)
+.....++.||+...+..
T Consensus 181 r~~~l~~~~~~~~~dGLns 199 (219)
T cd00899 181 RFALLQNSRERDHSDGLNS 199 (219)
T ss_pred HHHHHHhhCeEeccCCccc
Confidence 334455666776555443
|
Beta-4-Galactosyltransferase transfers galactose from uridine diphosphogalactose to the terminal beta-N-acetylglucosamine residues, hereby forming the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. At least seven homologous beta-4-galactosyltransferase isoforms have been identified that use different types of glycoproteins and glycolipids as substrates. Of the seven identified members of the beta-1,4-galactosyltransferase subfamily (beta1,4-Gal-T1 to -T7), b1,4-Gal-T1 is most characterized (biochemically). It is a Golgi-resident type II membrane enzyme with a cytoplasmic domain, membrane spanning region, and a stem region and catalytic domain facing the lumen. |
| >PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.99 E-value=0.00011 Score=75.34 Aligned_cols=210 Identities=18% Similarity=0.211 Sum_probs=104.0
Q ss_pred CCCeEEEEeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEec--c--CCCC
Q 011596 219 FFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHR--I--LRDG 294 (482)
Q Consensus 219 ~~P~VsViIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~--~--~~~g 294 (482)
..+.+-|+|-+||.++.+++||+++++..-..+++.|+|..||++..+.+.++.+. ..+..+.... + ...+
T Consensus 91 ~~~~~pVlV~AcNRp~yl~r~L~sLl~~rp~~~~fpIiVSQDg~~~~~~~vi~~y~-----~~v~~i~~~~~~~i~~~~~ 165 (434)
T PF03071_consen 91 KEPVIPVLVFACNRPDYLRRTLDSLLKYRPSAEKFPIIVSQDGDDEEVAEVIKSYG-----DQVTYIQHPDFSPITIPPK 165 (434)
T ss_dssp ------EEEEESS-TT-HHHHHHHHHHH-S-TTTS-EEEEE-TT-HHHHHHHHGGG-----GGSEEEE-S--S-----TT
T ss_pred CCCcceEEEEecCCcHHHHHHHHHHHHcCCCCCCccEEEEecCCcHHHHHHHHHhh-----hhheeeecCCcCCceeCcc
Confidence 46678999999999999999999999855223467789999999998877766431 1233221100 0 0011
Q ss_pred C-c-------cccHHHHhhhcc-cCCceEEEEEcCCCCCChHHHH---HHHHHhhcCCCeEEEeeeeeeecCCCChHHHH
Q 011596 295 Y-K-------AGNLKSAMNCSY-VKDYEFVAIFDADFQPNPDFLR---RTVPHFKDNEELGLVQARWSFVNKDENLLTRL 362 (482)
Q Consensus 295 ~-K-------a~aln~al~~~~-~a~~d~Vl~lDaD~~~~pd~L~---~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~~ 362 (482)
. | +.....|+.... .-+++.++++.+|..+.||+++ .+.+.+++||.+-+|++--. |.......
T Consensus 166 ~~~~~~y~~IA~HYk~aL~~vF~~~~~~~vIIlEDDL~isPDFf~Yf~~~~~ll~~D~sl~ciSawNd--nG~~~~~~-- 241 (434)
T PF03071_consen 166 EKKFKGYYKIARHYKWALSQVFNKFKYSSVIILEDDLEISPDFFEYFSATLPLLENDPSLWCISAWND--NGKEHFVD-- 241 (434)
T ss_dssp -GGGHHHHHHHHHHHHHHHHHHHTS--SEEEEEETTEEE-TTHHHHHHHHHHHHHH-TTEEEEES--T--T-BGGGS---
T ss_pred cccccchHHHHHHHHHHHHHHHHhcCCceEEEEecCcccCccHHHHHHHHHHHHhcCCCeEEEEcccc--CCcccccc--
Confidence 0 1 111222333221 3468899999999999998875 45666677899998887421 11001000
Q ss_pred HhhhhhhhhhhhhhhccccccccccccceEeeeHHHHHHcC-CCCCCCchhHHHHHHHHHHCCCcEEEeccce---eccc
Q 011596 363 QDINLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEDSG-GWMERTTVEDMDIAVRAHLRGWKFIFLNDVE---CQCE 438 (482)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~iG-gf~~~~~~ED~~l~~rl~~~G~ki~~~~~~~---~~~~ 438 (482)
. .........-.++|-+-|++|+.++++. .|+. .. -|..+-....++|...++ |++- ..+.
T Consensus 242 -~-----------~~~~~lyRsdffpglGWml~r~~w~el~~~Wp~-~~-WDdwmR~~~~rkgR~cIr-PeisRt~~fg~ 306 (434)
T PF03071_consen 242 -D-----------SRPSLLYRSDFFPGLGWMLTRELWDELEPKWPK-AF-WDDWMRQPEQRKGRQCIR-PEISRTYHFGK 306 (434)
T ss_dssp -T-----------T-TT-EEEESS---SSEEEEHHHHHHHGGG--S-S--HHHHHTSHHHHTT-EEEE-ESSBSEEE--S
T ss_pred -C-----------CCccceEecccCCchHHHhhHHHHHhhcccCCC-CC-chhhhcCccccCCCceee-ccCCCccccCc
Confidence 0 0000111111267888999999999975 4543 23 333344456778866655 4433 4445
Q ss_pred CCcCHHHHHHHHHh
Q 011596 439 LPESYEAYRKQQHR 452 (482)
Q Consensus 439 ~p~t~~~~~~qr~R 452 (482)
...+...++.+..+
T Consensus 307 ~G~s~g~~f~~~l~ 320 (434)
T PF03071_consen 307 KGVSNGQFFDKYLK 320 (434)
T ss_dssp SSSS-THHHHHTGG
T ss_pred CCcchHHHHHHHHh
Confidence 55565666655433
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GNT-I, GLCNAC-T I) 2.4.1.101 from EC transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide. This is an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus, and is probably distributed in all tissues. The catalytic domain is located at the C terminus []. These proteins are members of the glycosyl transferase family 13 (GH13 from CAZY); GO: 0003827 alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0000139 Golgi membrane; PDB: 2APC_A 2AM4_A 1FO9_A 2AM3_A 1FOA_A 2AM5_A 1FO8_A. |
| >COG4092 Predicted glycosyltransferase involved in capsule biosynthesis [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.0029 Score=60.00 Aligned_cols=196 Identities=12% Similarity=0.100 Sum_probs=102.4
Q ss_pred CeEEEEeecCCch--H-HHHHHHH--HHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCC
Q 011596 221 PMVLVQIPMCNEK--E-VYQQSIA--AVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGY 295 (482)
Q Consensus 221 P~VsViIP~yne~--~-~l~~tL~--Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~ 295 (482)
|..+++||+--.+ . .-.+.+. ++++---+.+-..|+++++++-.. ..++.+. ++..++.|..--.....
T Consensus 2 ~~~~~iiPv~~S~e~p~~~~R~f~~~~~~k~fts~~~~~vi~~~~~~~~d--~~i~~~i----~~~~~~~yl~~~s~~~F 75 (346)
T COG4092 2 QPNGEIIPVAESEELPLTDSRQFSRTSAVKVFTSSDITMVICLRAHEVMD--RLIRSYI----DPMPRVLYLDFGSPEPF 75 (346)
T ss_pred CCcceEeecchhhccchhHHHHHhhHhhhhhccccccEEEEEEecchhHH--HHHHHHh----ccccceEEEecCCCccc
Confidence 5678888886554 1 2222233 223322345567888888866332 2333333 44556566533222110
Q ss_pred --ccccHHHHhhhc-ccCCceEEEEEcCCCCCChHHHHHHHHHhhc---CCCe-EEEeeeeeeecCCCChHH-HHHhhhh
Q 011596 296 --KAGNLKSAMNCS-YVKDYEFVAIFDADFQPNPDFLRRTVPHFKD---NEEL-GLVQARWSFVNKDENLLT-RLQDINL 367 (482)
Q Consensus 296 --Ka~aln~al~~~-~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~---~p~v-~~V~~~~~~~n~~~~~~~-~~~~~~~ 367 (482)
-+..-|.|...+ ...+.++|+|+|.||....|-..++++...- ..++ ....-++.+.|+..+-.- ....+.+
T Consensus 76 ~s~~~c~n~ga~Ysh~~~~Sn~vlFlDvDc~~S~dnF~k~l~~~~ikk~~tnI~a~~vlPV~~LNk~~~~v~f~~~d~f~ 155 (346)
T COG4092 76 ASETICANNGADYSHEKCESNLVLFLDVDCFGSSDNFAKMLSIATIKKMRTNIDAPLVLPVYHLNKADTQVFFDVEDMFL 155 (346)
T ss_pred cchhhhhhccchhhhccccccEEEEEeccccccHHHHHHHHHHHHHHHHHhccCcceeeeeeecchhhhhHHHHHHHHhh
Confidence 112223333321 1345899999999999997666666633221 1233 233345556665443111 1111111
Q ss_pred --hhhhhhhhhhccccccccccccceEeeeHHHHHHcCCCCCC---CchhHHHHHHHHHH
Q 011596 368 --SFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEDSGGWMER---TTVEDMDIAVRAHL 422 (482)
Q Consensus 368 --~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~iGgf~~~---~~~ED~~l~~rl~~ 422 (482)
..........+....-+........++.+..+-..||++|. +.+||+++..|+..
T Consensus 156 d~~i~es~~~~~~~~~~ff~~~~T~~~liN~~~F~~tgGydE~F~GhG~EDfe~~~R~~l 215 (346)
T COG4092 156 DAMIFESPLAEFRKEDNFFIAPYTNIFLINRRMFSLTGGYDERFRGHGSEDFEFLTRLGL 215 (346)
T ss_pred hhHhhhhHHHHhCcccccccccccceEEEehhHHHHhcCCccccccCCchhHHHHHHHHH
Confidence 11111112222222122234556678999999999999987 55799999999876
|
|
| >PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2 | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.0003 Score=57.45 Aligned_cols=84 Identities=19% Similarity=0.201 Sum_probs=56.3
Q ss_pred CCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCC-CccccHHHHhhhcc
Q 011596 230 CNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDG-YKAGNLKSAMNCSY 308 (482)
Q Consensus 230 yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g-~Ka~aln~al~~~~ 308 (482)
+||+..|.+.|...+++.+.. ++|+||+|+|.+.+++++. .++.++....+.... .....++...+.
T Consensus 1 rne~~~L~~wl~~~~~lG~d~----i~i~d~~s~D~t~~~l~~~------~~v~i~~~~~~~~~~~~~~~~~~~~~~~-- 68 (97)
T PF13704_consen 1 RNEADYLPEWLAHHLALGVDH----IYIYDDGSTDGTREILRAL------PGVGIIRWVDPYRDERRQRAWRNALIER-- 68 (97)
T ss_pred CChHHHHHHHHHHHHHcCCCE----EEEEECCCCccHHHHHHhC------CCcEEEEeCCCccchHHHHHHHHHHHHh--
Confidence 689999999999998887643 7789999999998887643 346666443322221 112222333332
Q ss_pred cCCceEEEEEcCCCCCC
Q 011596 309 VKDYEFVAIFDADFQPN 325 (482)
Q Consensus 309 ~a~~d~Vl~lDaD~~~~ 325 (482)
..++||++++|+|-.+.
T Consensus 69 ~~~~dWvl~~D~DEfl~ 85 (97)
T PF13704_consen 69 AFDADWVLFLDADEFLV 85 (97)
T ss_pred CCCCCEEEEEeeeEEEe
Confidence 35789999999997653
|
|
| >PF03452 Anp1: Anp1; InterPro: IPR005109 The members of this family (Anp1, Van1 and Mnn9) are membrane proteins required for proper Golgi function | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.0015 Score=63.08 Aligned_cols=115 Identities=17% Similarity=0.241 Sum_probs=76.7
Q ss_pred CCCeEEEEeecCCchHHHHHHHHHHHhCCCCCCceEE-EEEcCCC-CHHHHHHHHHHHHHhhh--------CCCeEEEEe
Q 011596 219 FFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILI-QVLDDSD-DPTAQTLIKEEVLKWQE--------AGANIVYRH 288 (482)
Q Consensus 219 ~~P~VsViIP~yne~~~l~~tL~Sll~q~yp~~~~~I-iVvDdss-dd~t~~~~~~~~~~~~~--------~~v~vv~~~ 288 (482)
.-++|-|+.|..|.+..+..-++.+.+++||.+.+.+ +++.|++ -+.+.+.+++...+... ..+.++ .
T Consensus 23 ~~e~VLILtplrna~~~l~~y~~~L~~L~YP~~lIsLgfLv~d~~e~d~t~~~l~~~~~~~q~~~~~~~~F~~itIl--~ 100 (269)
T PF03452_consen 23 NKESVLILTPLRNAASFLPDYFDNLLSLTYPHELISLGFLVSDSSEFDNTLKILEAALKKLQSHGPESKRFRSITIL--R 100 (269)
T ss_pred cCCeEEEEEecCCchHHHHHHHHHHHhCCCCchheEEEEEcCCCchhHHHHHHHHHHHHHHhccCcccCCcceEEEE--c
Confidence 5689999999999999999999999999999988877 4455544 26666666655544321 122222 1
Q ss_pred ccC----------CCC---------CccccHHHHhhhcccCCceEEEEEcCCCCC-ChHHHHHHHHH
Q 011596 289 RIL----------RDG---------YKAGNLKSAMNCSYVKDYEFVAIFDADFQP-NPDFLRRTVPH 335 (482)
Q Consensus 289 ~~~----------~~g---------~Ka~aln~al~~~~~a~~d~Vl~lDaD~~~-~pd~L~~lv~~ 335 (482)
.+. ++. .-+.+.|+.+..+.....+||+.+|+|.+- +|+.++.++.+
T Consensus 101 ~df~~~~~~~~~~RH~~~~Q~~RR~~mAraRN~LL~~aL~p~~swVlWlDaDIv~~P~~lI~dli~~ 167 (269)
T PF03452_consen 101 KDFGQQLSQDRSERHAFEVQRPRRRAMARARNFLLSSALGPWHSWVLWLDADIVETPPTLIQDLIAH 167 (269)
T ss_pred CCCcccccCchhhccchhhHHHHHHHHHHHHHHHHHhhcCCcccEEEEEecCcccCChHHHHHHHhC
Confidence 211 111 112345555554445578999999999865 67777777653
|
These proteins colocalize within the cis Golgi, where they are physically associated in two distinct complexes []. |
| >PF09488 Osmo_MPGsynth: Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth); InterPro: IPR012812 This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together with mannosyl-3-phosphoglycerate phosphatase (MPGP), comprises a two-step pathway for mannosylglycerate biosynthesis | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0014 Score=64.80 Aligned_cols=125 Identities=16% Similarity=0.185 Sum_probs=60.4
Q ss_pred CeEEEEeecCCch-HHHHHHHHHHHhCCCCCCceEEEEEcCCCC---HHHHHHHHHHHHHhhhCCCeEEEEeccC-----
Q 011596 221 PMVLVQIPMCNEK-EVYQQSIAAVCNLDWPKSKILIQVLDDSDD---PTAQTLIKEEVLKWQEAGANIVYRHRIL----- 291 (482)
Q Consensus 221 P~VsViIP~yne~-~~l~~tL~Sll~q~yp~~~~~IiVvDdssd---d~t~~~~~~~~~~~~~~~v~vv~~~~~~----- 291 (482)
-..+||||+.||+ ..++-.|. ..|.+. .||||.||+. |......+...+.+...+-.++.+|..+
T Consensus 50 ~~maIVVP~KnE~l~lleGVL~-----gIPh~C-~IIvVSNS~r~~~d~f~~E~d~l~~f~~~t~r~~~~vHQkDp~lA~ 123 (381)
T PF09488_consen 50 SKMAIVVPCKNEKLKLLEGVLS-----GIPHDC-LIIVVSNSSREPVDRFKMEVDLLKHFCRLTRRQIIIVHQKDPGLAE 123 (381)
T ss_dssp TTEEEEEEESS--HHHHHHHHH-----CS-TTS-EEEEEE---CSSSCHHHHHHHHHHHHHHHCT--EEEEETT-HHHHH
T ss_pred hCcEEEEECCCCchhhhhhhhh-----cCCCCC-eEEEEECCCCCCccHHHHHHHHHHHHHHhhcCceEEEecCCHHHHH
Confidence 4589999999998 55554444 346644 4778888776 4443322222111112222333333321
Q ss_pred -----------------CCCCccccHHHHhhhcccCCceEEEEEcCCCCCChHH---HHHHHHHhhc-CCCeEEEeeeee
Q 011596 292 -----------------RDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDF---LRRTVPHFKD-NEELGLVQARWS 350 (482)
Q Consensus 292 -----------------~~g~Ka~aln~al~~~~~a~~d~Vl~lDaD~~~~pd~---L~~lv~~f~~-~p~v~~V~~~~~ 350 (482)
++ ||+.+|-.|+-.+.....+||.|+|||...+-.. ++...+-|.. .....+|--.+.
T Consensus 124 Af~~aGy~~il~~~g~VR~-GKgEGMiiGillAk~~g~~YVGFvDADNyiPGaV~EYvk~yAAGf~ms~spytMVRi~W~ 202 (381)
T PF09488_consen 124 AFKEAGYPEILDEDGLVRN-GKGEGMIIGILLAKAPGKRYVGFVDADNYIPGAVNEYVKDYAAGFAMSESPYTMVRIHWR 202 (381)
T ss_dssp HHHHTT--TTB-TTSSB-S-SHHHHHHHHHHHHHHTT-SEEEE--TTBS-HHHHHHHHHHHHHHHHC-SSSCEEEEEE--
T ss_pred HHHHcCcHHHhCCCCceec-CchHHHHHHHHHHHhcCCceEeEeeccCCCcchHHHHHHHHHhhhcccCCCceEEEEEec
Confidence 33 4888888887755457789999999999876432 3333333332 234456655554
Q ss_pred ee
Q 011596 351 FV 352 (482)
Q Consensus 351 ~~ 352 (482)
+.
T Consensus 203 ~K 204 (381)
T PF09488_consen 203 SK 204 (381)
T ss_dssp --
T ss_pred CC
Confidence 43
|
Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus (Rhodothermus obamensis), this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.; GO: 0050504 mannosyl-3-phosphoglycerate synthase activity, 0051479 mannosylglycerate biosynthetic process, 0005737 cytoplasm; PDB: 2WVM_A 2WVL_A 2WVK_A 2ZU7_B 2ZU9_B 2ZU8_A. |
| >TIGR02460 osmo_MPGsynth mannosyl-3-phosphoglycerate synthase | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0049 Score=60.70 Aligned_cols=100 Identities=17% Similarity=0.185 Sum_probs=59.5
Q ss_pred CCeEEEEeecCCch-HHHHHHHHHHHhCCCCCCceEEEEEcCCCC---HHHHH---HHHHHHHHhhhCCCeEEEEecc--
Q 011596 220 FPMVLVQIPMCNEK-EVYQQSIAAVCNLDWPKSKILIQVLDDSDD---PTAQT---LIKEEVLKWQEAGANIVYRHRI-- 290 (482)
Q Consensus 220 ~P~VsViIP~yne~-~~l~~tL~Sll~q~yp~~~~~IiVvDdssd---d~t~~---~~~~~~~~~~~~~v~vv~~~~~-- 290 (482)
.-...|+||+.||. ..++-.|. ..|.+. .||||.||+. |.... +++.+. .+.+..+-+++...+
T Consensus 49 ~~~maIVVP~KdE~l~lleGVL~-----gIPh~c-~iIvVSNS~r~~~d~f~~E~d~~~~f~-~~t~r~~i~vHQkDp~l 121 (381)
T TIGR02460 49 LGKTAIVVPVKNEKLHLLEGVLS-----GIPHEC-PIIIVSNSKREPPDRFKMEVDLIRHFS-NLTHRKIIIIHQKDPAL 121 (381)
T ss_pred HhCcEEEEEcCCCchhHHhhHhh-----cCCCCC-eEEEEeCCCCCChhHHHHHHHHHHHHH-HhhcCceEEEEcCCHHH
Confidence 34689999999998 55544443 346644 4778888765 33322 222221 111222322222111
Q ss_pred ------------------CCCCCccccHHHHhhhcccCCceEEEEEcCCCCCChH
Q 011596 291 ------------------LRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPD 327 (482)
Q Consensus 291 ------------------~~~g~Ka~aln~al~~~~~a~~d~Vl~lDaD~~~~pd 327 (482)
-++ ||+.+|-.|+-.+.....+||.|+|||..+|-.
T Consensus 122 a~Af~~~gy~~il~~~g~VR~-GKgEGMiiG~lLAk~~g~~YVGFiDaDNyiPGa 175 (381)
T TIGR02460 122 AEAFKEVGYTSILGENGRVRS-GKGEGMLLGLLLAKAIGAEYVGFVDADNYFPGA 175 (381)
T ss_pred HHHHHHcCchhhhCCCCceec-CcchHHHHHHHHHHHhCCceEeEeecccCCCch
Confidence 133 499988888765445678999999999988653
|
This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together mannosyl-3-phosphoglycerate phosphatase (MPGP) comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus, this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase. |
| >PRK14503 mannosyl-3-phosphoglycerate synthase; Provisional | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0048 Score=61.14 Aligned_cols=100 Identities=15% Similarity=0.149 Sum_probs=59.4
Q ss_pred CCeEEEEeecCCch-HHHHHHHHHHHhCCCCCCceEEEEEcCCCC---HHHHHHHHHHH--HHhhhCCCeEEEEecc---
Q 011596 220 FPMVLVQIPMCNEK-EVYQQSIAAVCNLDWPKSKILIQVLDDSDD---PTAQTLIKEEV--LKWQEAGANIVYRHRI--- 290 (482)
Q Consensus 220 ~P~VsViIP~yne~-~~l~~tL~Sll~q~yp~~~~~IiVvDdssd---d~t~~~~~~~~--~~~~~~~v~vv~~~~~--- 290 (482)
.-...|+||+.||. ..++-.|. ..|.+. .||||.||+. |......+... ..+.+..+-+++...+
T Consensus 50 ~~~mAIVVP~KdE~l~lleGVL~-----gIPh~c-~iIvVSNS~r~~~d~f~~E~dlv~~f~~~t~r~~i~vHQkDp~la 123 (393)
T PRK14503 50 LGRMAIVVPVKNERLKLLEGVLK-----GIPHEC-PIIVVSNSKREPPDRFKLEVDLVRHFYRLTQRPIIIVHQKDPGLA 123 (393)
T ss_pred HhCcEEEEEcCCCchhHHhhHhh-----cCCCCC-eEEEEeCCCCCCchHHHHHHHHHHHHHhhhcCceEEEEcCCHHHH
Confidence 34689999999998 55544443 346644 4778888754 33322221111 1112222322322221
Q ss_pred -----------------CCCCCccccHHHHhhhcccCCceEEEEEcCCCCCCh
Q 011596 291 -----------------LRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNP 326 (482)
Q Consensus 291 -----------------~~~g~Ka~aln~al~~~~~a~~d~Vl~lDaD~~~~p 326 (482)
-++ ||+.+|-.|+-.+.....+||.|+|||..+|-
T Consensus 124 ~Af~~aGyp~il~~~g~VR~-GKgEGMiiG~lLAk~~g~~YVGFiDADNyiPG 175 (393)
T PRK14503 124 EALKEAGYPYILDENGLVRS-GKGEGMIIGLLLAKALGARYVGFVDADNYIPG 175 (393)
T ss_pred HHHHHcCChhhhCCCCceec-CcchHHHHHHHHHHHhCCCeEeEeecccCCCc
Confidence 134 49999888876544567899999999998865
|
|
| >KOG3588 consensus Chondroitin synthase 1 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.032 Score=55.42 Aligned_cols=202 Identities=13% Similarity=0.160 Sum_probs=110.5
Q ss_pred CCCeEEEEeecCCchHHHHHHHHHHHhCCCCCCceEEEEEc-CCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCcc
Q 011596 219 FFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLD-DSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKA 297 (482)
Q Consensus 219 ~~P~VsViIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvD-dssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka 297 (482)
+.|.+.+++|...+.....+...+++... ++++.++|+- +.|.++-.. ++....+...-+++... .....=..+
T Consensus 227 ~~pgih~i~pl~gr~~~f~rf~q~~c~~~--d~~l~l~vv~f~~se~e~ak--~e~~tslra~f~~~q~l-~lngeFSRa 301 (494)
T KOG3588|consen 227 EDPGIHMIMPLRGRAAIFARFAQSICARG--DDRLALSVVYFGYSEDEMAK--RETITSLRASFIPVQFL-GLNGEFSRA 301 (494)
T ss_pred cCCCceEEEeccchHHHhhhhhHHHhccC--CCceEEEEEEecCCChHHHh--hhHHHHHhhcCCceEEe-cccchhhhh
Confidence 57889999999999999999988888643 4445544433 334333222 12222222222333322 111111345
Q ss_pred ccHHHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCC-ChHHHHHhhhhhhhhhhhhh
Q 011596 298 GNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDE-NLLTRLQDINLSFHFEVEQQ 376 (482)
Q Consensus 298 ~aln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~-~~~~~~~~~~~~~~~~~~~~ 376 (482)
-++..|-+. ....-.+.|.|-|.....++|.++-..-. |+-.+ ..+..+...+. .+...-.... ..++.....
T Consensus 302 ~aL~vGAe~--~~~nvLLFfcDVDi~FT~efL~rcr~Nt~--~gkqi-yfPivFS~ynp~ivy~~~~~~p-~e~~~~~~~ 375 (494)
T KOG3588|consen 302 KALMVGAET--LNANVLLFFCDVDIYFTTEFLNRCRLNTI--LGKQI-YFPIVFSQYNPEIVYEQDKPLP-AEQQLVIKK 375 (494)
T ss_pred HHHHhhHHH--hccceeEEEeccceeehHHHHHHHhhccC--CCceE-EEEEEEeecCcceeecCCCCCc-hhHheeecc
Confidence 566666664 22445677789999999999998876554 33221 22222221111 1111000000 111111111
Q ss_pred hccccccccccccceEeeeHHHHHHcCCCCCC---CchhHHHHHHHHHHCCCcEEEeccce
Q 011596 377 VNGVFINFFGFNGTAGVWRIKALEDSGGWMER---TTVEDMDIAVRAHLRGWKFIFLNDVE 434 (482)
Q Consensus 377 ~~~~~~~~~~~~G~~~~~Rr~~l~~iGgf~~~---~~~ED~~l~~rl~~~G~ki~~~~~~~ 434 (482)
-.+.+.+ +| -|-.+.+|-+. -++|||+.. -..||.++.......|.+++-.|++-
T Consensus 376 ~tGfwRd-fG-fGmtc~yrsd~-~~vgGFD~~I~GWG~EDV~Ly~K~v~~~l~viR~p~pG 433 (494)
T KOG3588|consen 376 DTGFWRD-FG-FGMTCQYRSDF-LTVGGFDMEIKGWGGEDVDLYRKYVHSGLKVIRTPEPG 433 (494)
T ss_pred ccccccc-cC-CceeEEeeccc-eeecCcceeeeccCcchHHHHHHHHhcCcEEEecCCCc
Confidence 1222222 22 25556666554 567999865 34699999999999999999888876
|
|
| >PF05679 CHGN: Chondroitin N-acetylgalactosaminyltransferase; InterPro: IPR008428 This family represents Chondroitin N-acetylgalactosaminyltransferase | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.066 Score=57.15 Aligned_cols=203 Identities=14% Similarity=0.153 Sum_probs=111.6
Q ss_pred CCeEEEEeecCCc-hHHHHHHHHHHHhCC-CCCCceE-EEEEcCC-CC-H---HHHHHHHHHHHHhhhCCCeEEEEeccC
Q 011596 220 FPMVLVQIPMCNE-KEVYQQSIAAVCNLD-WPKSKIL-IQVLDDS-DD-P---TAQTLIKEEVLKWQEAGANIVYRHRIL 291 (482)
Q Consensus 220 ~P~VsViIP~yne-~~~l~~tL~Sll~q~-yp~~~~~-IiVvDds-sd-d---~t~~~~~~~~~~~~~~~v~vv~~~~~~ 291 (482)
-..|.||||..+. .+.+.+-++...+.- -++++.. ++|...+ .+ + .+.+.++++..+++...+.++-.. .
T Consensus 246 ~~~V~iIvPl~~r~~~~~~~Fl~~~~~~~l~~~~~~~L~vV~~~~~~~~~~~~~ik~~l~~l~~k~~~~~i~~i~~~--~ 323 (499)
T PF05679_consen 246 STRVHIIVPLSGREADWFRRFLENFEKVCLETDDNVFLTVVLFYDPSDSDSISQIKELLEELERKYPFSRIKWISVK--T 323 (499)
T ss_pred CCEEEEEEEecCccHHHHHHHHHHHHHHhcccCCceEEEEEEecCcccchhHHHHHHHHHHHHHhCCccceEEEEec--C
Confidence 4689999999999 666666555544310 0122222 3333322 11 2 233466667777765566665432 1
Q ss_pred CCCCccccHHHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChH-HHHHhhhhhhh
Q 011596 292 RDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLL-TRLQDINLSFH 370 (482)
Q Consensus 292 ~~g~Ka~aln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~-~~~~~~~~~~~ 370 (482)
+.-.++.++..|++. ....++++++|-|..+++++|.++-..-..+- -|..+..+..-+.... .......- .
T Consensus 324 ~~fsr~~~Ld~g~~~--~~~d~L~f~~Dvd~~f~~~fL~rcR~nti~g~---qvy~PI~Fs~y~p~~~~~~~~~~~~--~ 396 (499)
T PF05679_consen 324 GEFSRGAALDVGAKK--FPPDSLLFFCDVDMVFTSDFLNRCRMNTIPGK---QVYFPIVFSQYNPDIVYAGKPPEPD--Q 396 (499)
T ss_pred CCccHHHHHHhhccc--CCCCcEEEEEeCCcccCHHHHHHHHHhhhcCc---EEEEeeeccccCCcccccCCCCccc--c
Confidence 333477788888874 45678999999999999999999887665321 2333333321111110 00000000 0
Q ss_pred hhhhhhhccccccccccccceEeeeHHHHHHc-CCCCCC---CchhHHHHHHHHHHCC--CcEEEeccce
Q 011596 371 FEVEQQVNGVFINFFGFNGTAGVWRIKALEDS-GGWMER---TTVEDMDIAVRAHLRG--WKFIFLNDVE 434 (482)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~i-Ggf~~~---~~~ED~~l~~rl~~~G--~ki~~~~~~~ 434 (482)
... ....|.+ ...+ -|..++++.+....- ||++.. ...||.++.-+..+.| ..+.=.+++.
T Consensus 397 ~~i-~~~~G~w-~~~g-fg~~~~YksDy~~~~~~~~~~~~~gwg~ED~~l~~~~l~~~~~l~V~Ra~ep~ 463 (499)
T PF05679_consen 397 FDI-SKDTGFW-RRFG-FGMVCFYKSDYMRIRGGGFDLSIRGWGGEDVDLYDKFLKSGHKLHVFRAVEPG 463 (499)
T ss_pred Ccc-CCCCCcc-ccCC-CceEEEEhhhhhhhcccccccccccccccHHHHHHHHHhCCCceEEEEccCCC
Confidence 000 1111111 1111 255566666554442 566543 4579999999999999 6676666665
|
Proteins have a type II transmembrane topology. The enzyme is involved in the biosynthetic initiation and elongation of chondroitin sulphate and is the key enzyme responsible for the selective chain assembly of chondroitin/dermatan sulphate on the linkage region tetrasaccharide common to various proteoglycans containing chondroitin/dermatan sulphate or heparin/heparan sulphate chains. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0032580 Golgi cisterna membrane |
| >PF11316 Rhamno_transf: Putative rhamnosyl transferase ; InterPro: IPR021466 This bacterial family of proteins has no known function | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.015 Score=55.55 Aligned_cols=93 Identities=15% Similarity=0.173 Sum_probs=64.9
Q ss_pred HHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHhhhcccCCceEEEE
Q 011596 238 QSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKDYEFVAI 317 (482)
Q Consensus 238 ~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al~~~~~a~~d~Vl~ 317 (482)
-|+.|+.+|+-|++++ +++.|+...+...+-++++.+.++ .+++++. ..+....++..+++.......++++.
T Consensus 46 ~~LpSl~~QTd~dF~~-lv~~~~~~P~~~~~rL~~l~~~~p--~~~i~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (234)
T PF11316_consen 46 YCLPSLRAQTDQDFTW-LVLFDDDLPEPYRERLRDLLADYP--QFRIVFR----PPGPHRDAMRRAINAARRDGADPVLQ 118 (234)
T ss_pred HHhhHHHhccCCCeEE-EEEECCCCCHHHHHHHHHHhccCC--CcEEEec----CCchHHHHHHHHHhhhccCCCCEEEE
Confidence 4899999999998776 446777777777777777766544 3455533 22324556666664322355665555
Q ss_pred --EcCCCCCChHHHHHHHHHhh
Q 011596 318 --FDADFQPNPDFLRRTVPHFK 337 (482)
Q Consensus 318 --lDaD~~~~pd~L~~lv~~f~ 337 (482)
+|+|+.+..|+++++-....
T Consensus 119 ~RLDdDDAl~~dFV~rlr~~a~ 140 (234)
T PF11316_consen 119 FRLDDDDALHRDFVARLRRAAA 140 (234)
T ss_pred EEECCcchhhHHHHHHHHHHHH
Confidence 59999999999999999884
|
|
| >PF02709 Glyco_transf_7C: N-terminal domain of galactosyltransferase; InterPro: IPR003859 This is a family of galactosyltransferases from a wide range of metazoa with three related galactosyltransferase activities; all three of which are possessed by one sequence in some cases | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.0039 Score=48.87 Aligned_cols=48 Identities=25% Similarity=0.201 Sum_probs=34.7
Q ss_pred cccceEeeeHHHHHHcCCCCCCCc---hhHHHHHHHHHHCCCcEEEeccce
Q 011596 387 FNGTAGVWRIKALEDSGGWMERTT---VEDMDIAVRAHLRGWKFIFLNDVE 434 (482)
Q Consensus 387 ~~G~~~~~Rr~~l~~iGgf~~~~~---~ED~~l~~rl~~~G~ki~~~~~~~ 434 (482)
+.|.+++++++.+.++|||++... .||.|+..|+..+|.++...+...
T Consensus 19 ~~Gg~~~~~~~~f~~vnGfde~f~gWG~ED~Dl~~Rl~~~g~~~~~~~~~~ 69 (78)
T PF02709_consen 19 FFGGVFAISREDFEKVNGFDERFWGWGGEDDDLYNRLWKAGLKIVRVPGSI 69 (78)
T ss_dssp ---SEEEEEHHHHHHTTSS-SS-TSCSSHHHHHHHHHHHTT---B-SSTTT
T ss_pred eeEEEEEEeHHHHHHcCCCCccccccCccHHHHHHHHHHcCCeEEecCCce
Confidence 679999999999999999998744 499999999999999887766544
|
The three functions are N-acetyllactosamine synthase (2.4.1.90 from EC); beta-N-acetylglucosaminyl-glycopeptide beta-1,4-galactosyltransferase (2.4.1.38 from EC); and lactose synthase (2.4.1.22 from EC). Note that N-acetyllactosamine synthase is a component of lactose synthase along with alpha-lactalbumin, in the absence of alpha-lactalbumin N-acetyllactosamine synthase is used.; GO: 0016757 transferase activity, transferring glycosyl groups, 0005975 carbohydrate metabolic process; PDB: 2AGD_B 3EE5_A 2AE7_B 2AEC_A 2FYA_A 2AES_B 2AH9_A 2FYB_A 2FY7_A 3LW6_A .... |
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.03 Score=60.91 Aligned_cols=101 Identities=15% Similarity=0.242 Sum_probs=60.4
Q ss_pred CCeEEEEeecCCch-HHHHHHHHHHHhCCCCCCceEEEEEcCCCC---HHHHH---HHHHHHHHhhhCCCeEEEEecc--
Q 011596 220 FPMVLVQIPMCNEK-EVYQQSIAAVCNLDWPKSKILIQVLDDSDD---PTAQT---LIKEEVLKWQEAGANIVYRHRI-- 290 (482)
Q Consensus 220 ~P~VsViIP~yne~-~~l~~tL~Sll~q~yp~~~~~IiVvDdssd---d~t~~---~~~~~~~~~~~~~v~vv~~~~~-- 290 (482)
.....||||+.||. ..++-.|. ..|.+. .||||.||+. |.... +++.+. .+.+..+-+++...+
T Consensus 54 ~~~~aivvp~k~e~~~~~~gvl~-----~ip~~c-~ii~vsns~r~~~d~~~~e~~~~~~~~-~~~~~~~~~vhq~dp~~ 126 (694)
T PRK14502 54 EKKMAIVLPIKDEDLKVFEGVLS-----GIPHDC-LMIVISNSSKQEVDNFKNEKDIVNRFC-RITHRQAIVVHQKNPEL 126 (694)
T ss_pred HhCcEEEEEcCCCchhHHhhHhh-----cCCCCC-eEEEEeCCCCCchHHHHHHHHHHHHHH-HhhcCceEEEEcCCHHH
Confidence 34689999999998 55554443 346654 4778888764 33222 222221 111222322322211
Q ss_pred ------------------CCCCCccccHHHHhhhcccCCceEEEEEcCCCCCChHH
Q 011596 291 ------------------LRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDF 328 (482)
Q Consensus 291 ------------------~~~g~Ka~aln~al~~~~~a~~d~Vl~lDaD~~~~pd~ 328 (482)
-++ ||+.+|-.|+-.+.....+||.|+|||..+|-..
T Consensus 127 a~a~~~~g~~~~~~~~~~vr~-gk~egm~~g~~la~~~g~~yvgfidadny~pg~v 181 (694)
T PRK14502 127 ANAIADAGYPELLGEDGLIRS-GKAEGMILGIILTMFSGRDYVGFIDTDNYIPGAV 181 (694)
T ss_pred HHHHHHcCChhhhCCCCceec-CcchHHHHHHHHHHhcCCceEeEeeccCCCCchH
Confidence 134 4999988887755456789999999999887543
|
|
| >PF11735 CAP59_mtransfer: Cryptococcal mannosyltransferase 1 ; InterPro: IPR021047 The capsule of pathogenic fungi is a complex polysaccharide whose formation is determined by a number of enzymes including, most importantly, alpha-1,3-mannosyltransferase 1 [, ] | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.17 Score=48.49 Aligned_cols=199 Identities=9% Similarity=0.024 Sum_probs=108.1
Q ss_pred EEEEeecCCchHHHHHHHH-HHHh--CCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCC-----
Q 011596 223 VLVQIPMCNEKEVYQQSIA-AVCN--LDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDG----- 294 (482)
Q Consensus 223 VsViIP~yne~~~l~~tL~-Sll~--q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g----- 294 (482)
|-|-.-.||.++.+..... ++++ +...++++-|.|++++|.|.|.++++++.......+++..+........
T Consensus 2 ~fIA~~l~~~~~iL~~~~~~~ll~li~~LGp~nv~vSIyE~~S~D~T~~~L~~L~~~L~~lgv~~~i~~~~~~~~~~~~~ 81 (241)
T PF11735_consen 2 YFIAANLYNNEDILPSLWGDALLELIRFLGPENVFVSIYESGSWDGTKEALRALDAELDALGVPHSIVLSDITHRDEIER 81 (241)
T ss_pred EEEEEEcccCHhHHHHHHHHHHHHHHHHhCcCeEEEEEEeCCCCccHHHHHHHHHHHHHhCCCCeEEEeCCCcccccccc
Confidence 4455567888877765555 4443 1233457888899999999999999988877767788766554222111
Q ss_pred --------CccccHHHHhhhcc------cCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeee-----e----
Q 011596 295 --------YKAGNLKSAMNCSY------VKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWS-----F---- 351 (482)
Q Consensus 295 --------~Ka~aln~al~~~~------~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~-----~---- 351 (482)
+-+.-.|.|++=.+ ....|.|+|++ |....+.-+.+++..-.. .+.+++++--. +
T Consensus 82 ~~~~~RI~~LA~lRN~ALePL~~~~~~~~~~fd~VlfLN-DV~f~~~Dil~LL~~~~~-~~~~~aCamDf~~~~~fYD~w 159 (241)
T PF11735_consen 82 PPRLRRIEYLAELRNRALEPLYDLARKRGRRFDKVLFLN-DVFFCPEDILELLFTRNR-GNYDMACAMDFINPPKFYDTW 159 (241)
T ss_pred cchhhhHHHHHHHHhHHHHHHHhhhhccCCCcCEEEEec-CcccCHHHHHHHHhhcCc-ccccchhhcccccCcccccee
Confidence 11234566665322 34467899999 888877666666655431 34444444211 1
Q ss_pred --ecCCCChHHHHHhhhhh-hhhhhhhhhccccccccccccceEeeeHHHHHHcC--CCCC-----CCchhHHHHHHHHH
Q 011596 352 --VNKDENLLTRLQDINLS-FHFEVEQQVNGVFINFFGFNGTAGVWRIKALEDSG--GWME-----RTTVEDMDIAVRAH 421 (482)
Q Consensus 352 --~n~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~iG--gf~~-----~~~~ED~~l~~rl~ 421 (482)
+..+++.+. .+...+. ..........+....+..+.|...++..+.+...+ .|.. ...+|-..++.-++
T Consensus 160 v~RD~~G~~~~-~~~~p~f~~~~~~~~~~~~~pv~V~SCWnG~va~~a~pf~~~~~lrFR~~~~~~~~~sEc~Li~~D~~ 238 (241)
T PF11735_consen 160 VLRDIEGDSFG-SPFWPYFRSASSRDRLRRGDPVPVFSCWNGMVAFDAEPFLPPTPLRFRADSEGECEASECCLIHADLW 238 (241)
T ss_pred EEecCCCCccc-cccCcCcCCHHHHHHHhcCCCeeeecccCCcccccchhhccCCceeecCCCCCceeccchhHhHhhhh
Confidence 011111110 0000000 00111112223333556677888888888888754 3322 13345555555555
Q ss_pred HCC
Q 011596 422 LRG 424 (482)
Q Consensus 422 ~~G 424 (482)
..|
T Consensus 239 ~~g 241 (241)
T PF11735_consen 239 RWG 241 (241)
T ss_pred hcC
Confidence 544
|
It is responsible for addition of mannose residues in an alpha-1,3 linkage to a polymannosly precursor. |
| >PF11397 GlcNAc: Glycosyltransferase (GlcNAc); InterPro: IPR021067 GlcNAc is an enzyme that carries out the first glycosylation step of hydroxylated Skp1; it is found in the cytoplasm and results in a pentasaccharide-linked 'HyPro-143[, ] | Back alignment and domain information |
|---|
Probab=95.14 E-value=0.15 Score=51.66 Aligned_cols=210 Identities=9% Similarity=0.057 Sum_probs=110.4
Q ss_pred EEEEeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCC--CHHHH--------------------HHHHH-H------
Q 011596 223 VLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSD--DPTAQ--------------------TLIKE-E------ 273 (482)
Q Consensus 223 VsViIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdss--dd~t~--------------------~~~~~-~------ 273 (482)
|-|.|++|-..+ ...||.++.++.-.++++.|-|++-.. ++... ..... .
T Consensus 2 IFvsiasyRD~~-c~~Tl~~~~~~A~~P~r~~~gv~~Q~~~~~~~c~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 80 (343)
T PF11397_consen 2 IFVSIASYRDPE-CAPTLKDLFARATNPERLFVGVVWQHYEEDPPCLSEGAPMDPGVHAAREEECVYCFLASSACAEWPD 80 (343)
T ss_pred EEEEEeeecCch-HHHHHHHHHHhcCCCceEEEEEEEEecCCCCcccccccccccccccccccchhhhhhhccccccccc
Confidence 678899999875 888888888755444688888887622 11110 01110 0
Q ss_pred -HHHhhhCCCeEEEEeccCCCCCccccHHHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcC-CCeEEEeeeeee
Q 011596 274 -VLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDN-EELGLVQARWSF 351 (482)
Q Consensus 274 -~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~-p~v~~V~~~~~~ 351 (482)
........|+++.++...-.| -.-|...+.+. -.+-+|++.+|+.+...++|=..++..++.- ..-.++++....
T Consensus 81 ~~~~~~~~~Ir~~~~~~~~a~G-p~~AR~la~~l--~~gE~y~LqiDSH~rF~~~WD~~li~~~~~~~~~~aVLS~YP~~ 157 (343)
T PF11397_consen 81 GALCLRSDQIRVIRVDASEARG-PCWARYLAQKL--YRGEDYYLQIDSHMRFVPGWDEILIEMLKSLRNPKAVLSTYPPG 157 (343)
T ss_pred ccccccCCeEEEEEeCHHHCcC-hHHHHHHHHHH--hCCCeEEEEEeccceeeccHHHHHHHHHHhcCCCCeEEecCCCC
Confidence 000012344544443333333 33344444432 3567899999999999999988888777652 233455544333
Q ss_pred ecC-CC------ChHHHHHhhhhhhh--hhhh-hhhcc--c-ccc-ccc-cccceEeeeHHHHHHcCCCCCCC----chh
Q 011596 352 VNK-DE------NLLTRLQDINLSFH--FEVE-QQVNG--V-FIN-FFG-FNGTAGVWRIKALEDSGGWMERT----TVE 412 (482)
Q Consensus 352 ~n~-~~------~~~~~~~~~~~~~~--~~~~-~~~~~--~-~~~-~~~-~~G~~~~~Rr~~l~~iGgf~~~~----~~E 412 (482)
.+. +. +....+....+... .... ..... . ... ... +.+..++-+-++++++ .|++.. .+|
T Consensus 158 ~~~~~~~~~~~~~~~~~lc~~~~~~~g~~~~~~~~~~~~~~~~~P~~~~f~aaGF~Fa~~~~~~eV-P~DP~lp~lF~GE 236 (343)
T PF11397_consen 158 YEPDGGQPEPEKTTVPRLCAARFGPDGMVRLGARWIKPAPKLEEPVPQPFWAAGFSFAPGHFVREV-PYDPHLPFLFDGE 236 (343)
T ss_pred cccccCCccccCCcccEEEEeEECCCCcEeecceecccccccCCCeeeceecccEEEcchhheecC-CCCCCcccccccH
Confidence 222 10 11111111111000 0000 00000 0 000 112 3444455555666665 566653 479
Q ss_pred HHHHHHHHHHCCCcEEEeccceecc
Q 011596 413 DMDIAVRAHLRGWKFIFLNDVECQC 437 (482)
Q Consensus 413 D~~l~~rl~~~G~ki~~~~~~~~~~ 437 (482)
.+.++.|+..+||.+.--+...+++
T Consensus 237 E~~~aaRlwT~GYD~Y~P~~~v~~H 261 (343)
T PF11397_consen 237 EISMAARLWTHGYDFYSPTRNVLFH 261 (343)
T ss_pred HHHHHHHHHHcCCccccCCCceeEE
Confidence 9999999999999986655555444
|
|
| >TIGR03584 PseF pseudaminic acid CMP-transferase | Back alignment and domain information |
|---|
Probab=94.66 E-value=0.93 Score=42.99 Aligned_cols=157 Identities=19% Similarity=0.133 Sum_probs=83.4
Q ss_pred CchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccC----CCCCccccHHHHhhh
Q 011596 231 NEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRIL----RDGYKAGNLKSAMNC 306 (482)
Q Consensus 231 ne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~----~~g~Ka~aln~al~~ 306 (482)
+....+..+++.+++...-+ + |+|.-| ++...+.++ ..+..+.+. |+. ..-+....+..|++.
T Consensus 22 ~GkpLi~~ti~~a~~s~~~d-~--IvVstd--~~~i~~~a~-------~~g~~v~~~-r~~~l~~d~~~~~~si~~~l~~ 88 (222)
T TIGR03584 22 CGKPMIAYSIEAALNSGLFD-K--VVVSTD--DEEIAEVAK-------SYGASVPFL-RPKELADDFTGTAPVVKHAIEE 88 (222)
T ss_pred CCcCHHHHHHHHHHhCCCCC-E--EEEeCC--CHHHHHHHH-------HcCCEeEEe-ChHHHcCCCCCchHHHHHHHHH
Confidence 44568899999998876533 2 334332 333333333 345665442 222 111355667778764
Q ss_pred ccc-CCceEEEEEcCCC-CCChHHHHHHHHHhhcCCCeEEEeeeeeee-cCCCCh-H---HHHHhhhhhhhhhhhhhhcc
Q 011596 307 SYV-KDYEFVAIFDADF-QPNPDFLRRTVPHFKDNEELGLVQARWSFV-NKDENL-L---TRLQDINLSFHFEVEQQVNG 379 (482)
Q Consensus 307 ~~~-a~~d~Vl~lDaD~-~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~-n~~~~~-~---~~~~~~~~~~~~~~~~~~~~ 379 (482)
... .+.|+|+++++|. ...++.+.+++..+.+ .+.+.+.+..... +...++ . ..+..+... . .....+.
T Consensus 89 l~~~~~~d~v~~l~~tsPl~~~~~I~~~i~~~~~-~~~ds~~sv~~~~~~~~~~~~~~~~g~~~~~~~~-~--~~~~rQd 164 (222)
T TIGR03584 89 LKLQKQYDHACCIYATAPFLQAKILKEAFELLKQ-PNAHFVFSVTSFAFPIQRAFKLKENGGVEMFFPE-H--FNTRSQD 164 (222)
T ss_pred HhhcCCCCEEEEecCCCCcCCHHHHHHHHHHHHh-CCCCEEEEeeccCCChHHheEECCCCcEEecCCC-c--ccCCCCC
Confidence 211 3479999999999 5589999999999975 3333333322211 010000 0 000000000 0 0000111
Q ss_pred ccccccccccceEeeeHHHHHHcCCC
Q 011596 380 VFINFFGFNGTAGVWRIKALEDSGGW 405 (482)
Q Consensus 380 ~~~~~~~~~G~~~~~Rr~~l~~iGgf 405 (482)
....+..+|+..+++++.+.+.+.+
T Consensus 165 -~~~~y~~nga~y~~~~~~~~~~~~~ 189 (222)
T TIGR03584 165 -LEEAYHDAGQFYWGKSQAWLESGPI 189 (222)
T ss_pred -CchheeeCCeEEEEEHHHHHhcCCc
Confidence 1233446999999999999876544
|
The sequences in this family include the pfam02348 (cytidyltransferase) domain and are homologous to the NeuA protein responsible for the transfer of CMP to neuraminic acid. According to, this gene is responsible for the transfer of CMP to the structurally related sugar, pseudaminic acid which is observed as a component of sugar modifications of flagellin in Campylobacter species. This gene is commonly observed in apparent operons with other genes responsible for the biosynthesis of pseudaminic acid and as a component of flagellar and exopolysaccharide biosynthesis loci. |
| >KOG1413 consensus N-acetylglucosaminyltransferase I [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.55 E-value=0.47 Score=47.17 Aligned_cols=125 Identities=19% Similarity=0.239 Sum_probs=82.4
Q ss_pred CCCeEEEEeecCCchHHHHHHHHHHHhCCCC-CCceEEEEEcCCCCHHHHHHHHHHHHHhh------hCCCeEEEEecc-
Q 011596 219 FFPMVLVQIPMCNEKEVYQQSIAAVCNLDWP-KSKILIQVLDDSDDPTAQTLIKEEVLKWQ------EAGANIVYRHRI- 290 (482)
Q Consensus 219 ~~P~VsViIP~yne~~~l~~tL~Sll~q~yp-~~~~~IiVvDdssdd~t~~~~~~~~~~~~------~~~v~vv~~~~~- 290 (482)
..|.+.|++=++|..+.++.+++.++.+. | .+++-|||.-|+++..+...++.+-.... .....+.+.+++
T Consensus 65 ~~~v~pvvVf~csR~~~lr~~v~kll~yr-PsaekfpiiVSQD~~~e~vk~~~~~~g~~v~~i~~~~h~~~ei~v~~~~~ 143 (411)
T KOG1413|consen 65 WPPVIPVVVFACSRADALRRHVKKLLEYR-PSAEKFPIIVSQDCEKEAVKKKLLSYGSDVSHIQHPMHLKDEISVPPRHK 143 (411)
T ss_pred CCCceeEEEEecCcHHHHHHHHHHHHHhC-cchhhcCEEEeccCCcHHHHHHHHHhccchhhhcCccccccccccCCccc
Confidence 45678999999999999999999999877 5 44677889989888887776664422111 011111111111
Q ss_pred CCCCCcc------ccHHHHhhhcccCCceEEEEEcCCCCCChHHH---HHHHHHhhcCCCeEEEee
Q 011596 291 LRDGYKA------GNLKSAMNCSYVKDYEFVAIFDADFQPNPDFL---RRTVPHFKDNEELGLVQA 347 (482)
Q Consensus 291 ~~~g~Ka------~aln~al~~~~~a~~d~Vl~lDaD~~~~pd~L---~~lv~~f~~~p~v~~V~~ 347 (482)
+.++++. .++|+.+. ..+++.++++-+|.-..||+. +.....++.+|.+-+|+.
T Consensus 144 k~~~Yy~IarHYkwAL~q~F~---~~~~s~vii~eDDl~iapDFF~YF~~t~~llk~D~siwcvsa 206 (411)
T KOG1413|consen 144 KFNAYYKIARHYKWALNQLFI---VFRESRVIITEDDLNIAPDFFSYFRNTIILLKGDPSIWCVSA 206 (411)
T ss_pred ccchhHHHHHHHHHHHhhHHh---hcCCceeEEecchhhhhhHHHHHHHHHHHHHhcCCceEEeee
Confidence 1122222 23444443 567899999999998888875 455666777888877754
|
|
| >KOG3916 consensus UDP-Gal:glucosylceramide beta-1,4-galactosyltransferase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.53 E-value=0.16 Score=50.14 Aligned_cols=182 Identities=16% Similarity=0.204 Sum_probs=102.6
Q ss_pred CCeEEEEeecCCchHHHHHHHHHHH----hCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCC
Q 011596 220 FPMVLVQIPMCNEKEVYQQSIAAVC----NLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGY 295 (482)
Q Consensus 220 ~P~VsViIP~yne~~~l~~tL~Sll----~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~ 295 (482)
.-+|.||||-+|.++.|.-.+.-+. +|.- .+-|+|++...++.. |
T Consensus 150 r~kvAIIIPfR~Re~HL~~~l~~LhP~LqrQrL---~y~iyVieQ~g~~~F-------------------------N--- 198 (372)
T KOG3916|consen 150 RHKVAIIIPFRNREEHLRYLLHHLHPFLQRQRL---DYRIYVIEQAGNKPF-------------------------N--- 198 (372)
T ss_pred cceeEEEeecccHHHHHHHHHHHhhHHHHhhhh---ceeEEEEEecCCCcc-------------------------c---
Confidence 3489999999999988877776543 2321 244566653222211 1
Q ss_pred ccccHHHHhhhcc-cCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHHHHhhhhhhhhhhh
Q 011596 296 KAGNLKSAMNCSY-VKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVE 374 (482)
Q Consensus 296 Ka~aln~al~~~~-~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ 374 (482)
++.=+|-|+..+. ....|-++|-|-|..+..|. + +-.+. ....-+...+..+.|..
T Consensus 199 RakL~NVGf~eAlkd~~wdCfIFHDVDllPenDr------------N--lY~C~----~~PRH~sva~dk~gy~L----- 255 (372)
T KOG3916|consen 199 RAKLLNVGFLEALKDYGWDCFIFHDVDLLPENDR------------N--LYGCP----EQPRHMSVALDKFGYRL----- 255 (372)
T ss_pred HHHhhhhHHHHHHHhcCCCEEEEecccccccCCC------------C--ccCCC----CCCcchhhhhhhccccc-----
Confidence 3333555655432 25677899999998775431 1 00011 01011111111221111
Q ss_pred hhhccccccccccccceEeeeHHHHHHcCCCCCC---CchhHHHHHHHHHHCCCcEEEeccce-----ecc-----cC-C
Q 011596 375 QQVNGVFINFFGFNGTAGVWRIKALEDSGGWMER---TTVEDMDIAVRAHLRGWKFIFLNDVE-----CQC-----EL-P 440 (482)
Q Consensus 375 ~~~~~~~~~~~~~~G~~~~~Rr~~l~~iGgf~~~---~~~ED~~l~~rl~~~G~ki~~~~~~~-----~~~-----~~-p 440 (482)
....+.|.-+++.++-++++.||+.. -.+||-|++.|+...|++|-=-+... ..+ +. |
T Consensus 256 --------PY~~~FGGVsalt~~qf~kINGFsN~fWGWGGEDDDl~nRv~~ag~~IsRp~~~igrYkMikH~~k~n~~n~ 327 (372)
T KOG3916|consen 256 --------PYKEYFGGVSALTKEQFRKINGFSNAFWGWGGEDDDLWNRVQLAGMKISRPPPEIGRYKMIKHHDKGNEPNP 327 (372)
T ss_pred --------cchhhhCchhhccHHHHHHhcCCCchhcccCCcchHHHHHHHhcCceeecCCCccceeEEeecccccCCCCh
Confidence 12224577788899999999999765 34699999999999999875433222 111 11 2
Q ss_pred cCHHHHHHHHHhhhhhhHHHHHH
Q 011596 441 ESYEAYRKQQHRWHSGPMQLFRL 463 (482)
Q Consensus 441 ~t~~~~~~qr~RW~~G~~q~~~~ 463 (482)
..++-..+-..||..-.+.....
T Consensus 328 ~Ry~lL~~tk~r~~~DGLnsl~Y 350 (372)
T KOG3916|consen 328 GRYKLLRNTKERQTQDGLNSLKY 350 (372)
T ss_pred HHHHHHHhhhhhhhhccccceee
Confidence 22444555567777665555443
|
|
| >PLN02917 CMP-KDO synthetase | Back alignment and domain information |
|---|
Probab=94.45 E-value=1.3 Score=43.89 Aligned_cols=185 Identities=14% Similarity=0.078 Sum_probs=92.6
Q ss_pred hHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHhhhcccCCc
Q 011596 233 KEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKDY 312 (482)
Q Consensus 233 ~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al~~~~~a~~ 312 (482)
...+..+++.+.+... . .. |+|.. +++...+.+. ..++.++...... .++-.+ ...|++.. ..+.
T Consensus 72 kPLL~~vi~~a~~~~~-~-~~-VVV~~--~~e~I~~~~~-------~~~v~vi~~~~~~-~~GT~~-~~~a~~~l-~~~~ 136 (293)
T PLN02917 72 KPMIQRTWERAKLATT-L-DH-IVVAT--DDERIAECCR-------GFGADVIMTSESC-RNGTER-CNEALKKL-EKKY 136 (293)
T ss_pred EEHHHHHHHHHHcCCC-C-CE-EEEEC--ChHHHHHHHH-------HcCCEEEeCCccc-CCchHH-HHHHHHhc-cCCC
Confidence 3578888888876542 2 22 44443 3344433332 3456555432222 333333 35666532 2347
Q ss_pred eEEEEEcCCC-CCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHHHH---hh-hh--hhhhh-h--hhhhccccc
Q 011596 313 EFVAIFDADF-QPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQ---DI-NL--SFHFE-V--EQQVNGVFI 382 (482)
Q Consensus 313 d~Vl~lDaD~-~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~~~---~~-~~--~~~~~-~--~~~~~~~~~ 382 (482)
|+|+++++|. .++++.+.+++..+.++++..+.+........+..-..+.. +- .. .+... . .........
T Consensus 137 d~Vlil~gD~PlI~~~tI~~li~~~~~~~~~iv~t~~~~~~~~~~~~ygrv~vv~~~~g~alyfsr~~Ipe~kd~~~~~~ 216 (293)
T PLN02917 137 DIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDASDPNRVKCVVDNQGYAIYFSRGLIPYNKSGKVNPQ 216 (293)
T ss_pred CEEEEecCCcCCCCHHHHHHHHHHHHhcCCceEEEEeeecCHHHhcCCCceEEEECCCCeEEEeecCcCCcCCCcccccc
Confidence 8999999999 56999999999988765554443331111101000011110 00 00 00000 0 011000001
Q ss_pred cccccccceEeeeHHHHHHcCCCCCCCc-hhHHHHHHHHHHCCCcEEEecc
Q 011596 383 NFFGFNGTAGVWRIKALEDSGGWMERTT-VEDMDIAVRAHLRGWKFIFLND 432 (482)
Q Consensus 383 ~~~~~~G~~~~~Rr~~l~~iGgf~~~~~-~ED~~l~~rl~~~G~ki~~~~~ 432 (482)
...-.+...++|+++.|.....+..... .|-+..-+++..+|+++..++.
T Consensus 217 ~i~~~n~Giy~f~~~~L~~l~~l~~~n~e~e~yLtdl~~le~G~~i~~~~~ 267 (293)
T PLN02917 217 FPYLLHLGIQSYDAKFLKIYPELPPTPLQLEEDLEQLKVLENGYKMKVIKV 267 (293)
T ss_pred cceEEEEEEEEeCHHHHHHHHcCCCCcccchhccHHHHHHhCCCceEEEEe
Confidence 1122466778899999987765544322 1222223357799999877653
|
|
| >PF01644 Chitin_synth_1: Chitin synthase; InterPro: IPR004834 This region is found commonly in chitin synthases classes I, II and III 2 | Back alignment and domain information |
|---|
Probab=94.36 E-value=0.58 Score=41.87 Aligned_cols=28 Identities=14% Similarity=0.203 Sum_probs=25.0
Q ss_pred cCCceEEEEEcCCCCCChHHHHHHHHHh
Q 011596 309 VKDYEFVAIFDADFQPNPDFLRRTVPHF 336 (482)
Q Consensus 309 ~a~~d~Vl~lDaD~~~~pd~L~~lv~~f 336 (482)
.-+.+|++++|+.+.|.++.|-++...|
T Consensus 136 ~l~P~vcvllDvGT~P~~~siy~Lwkaf 163 (163)
T PF01644_consen 136 QLQPNVCVLLDVGTKPGKDSIYHLWKAF 163 (163)
T ss_pred hcCCcEEEEEecCCCcCchHHHHHHhhC
Confidence 4678999999999999999999988765
|
4.1.16 from EC. Chitin a linear homopolymer of GlcNAc residues, it is an important component of the cell wall of fungi and is synthesised on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases []. ; GO: 0004100 chitin synthase activity, 0006031 chitin biosynthetic process |
| >PF01762 Galactosyl_T: Galactosyltransferase; InterPro: IPR002659 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=94.32 E-value=0.29 Score=45.36 Aligned_cols=180 Identities=18% Similarity=0.152 Sum_probs=92.7
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEEEcCCC--CHHHHHHHHHHHHHhhhCCCeEEEEeccC---CCCCcc-ccHHHHhhhc
Q 011596 234 EVYQQSIAAVCNLDWPKSKILIQVLDDSD--DPTAQTLIKEEVLKWQEAGANIVYRHRIL---RDGYKA-GNLKSAMNCS 307 (482)
Q Consensus 234 ~~l~~tL~Sll~q~yp~~~~~IiVvDdss--dd~t~~~~~~~~~~~~~~~v~vv~~~~~~---~~g~Ka-~aln~al~~~ 307 (482)
+.|++|-.+...+.-..-++ ++|+-.+. +....+.++++.++|.+ ++...-.+ +...|. ..++.+.++
T Consensus 4 ~~IR~TW~~~~~~~~~~~~~-~FvvG~~~~~~~~~~~~l~~E~~~y~D----il~~d~~D~y~nlt~K~~~~~~w~~~~- 77 (195)
T PF01762_consen 4 QAIRETWGNQRNFKGVRVKV-VFVVGESPNSDSDLQEALQEEAEKYGD----ILQGDFVDSYRNLTLKTLAGLKWASKH- 77 (195)
T ss_pred HHHHHHHhcccccCCCcEEE-EEEEecCCCCcHHHHHHhhhhhhhcCc----eEeeecccccchhhHHHHHHHHHHHhh-
Confidence 56677766655433333233 44554444 55566666666665432 22221111 222232 223333332
Q ss_pred ccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecC-CCChHHHHHhhhhhhhhhhhhhhccccccccc
Q 011596 308 YVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNK-DENLLTRLQDINLSFHFEVEQQVNGVFINFFG 386 (482)
Q Consensus 308 ~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (482)
-.+.+||+.+|+|+.+.++.|...+.....++.-..+.|....... ..+...++. ........... ..+
T Consensus 78 -c~~~~~v~k~DDD~~vn~~~l~~~L~~~~~~~~~~~~~g~~~~~~~~~r~~~~kw~-------v~~~~y~~~~y-P~y- 147 (195)
T PF01762_consen 78 -CPNAKYVLKVDDDVFVNPDRLVSFLKSLKQDPSKNSIYGGCIKNGPPIRDPSSKWY-------VSEEEYPDDYY-PPY- 147 (195)
T ss_pred -CCchhheeecCcEEEEehHHhhhhhhhcccCccccccccccccCCccccccccCce-------eeeeecccccC-CCc-
Confidence 3458999999999999998888877776222222223222211110 000001110 00001111111 112
Q ss_pred cccceEeeeHHHHHHcCC---CCCCCchhHHHHHHHHHHCCCcEEE
Q 011596 387 FNGTAGVWRIKALEDSGG---WMERTTVEDMDIAVRAHLRGWKFIF 429 (482)
Q Consensus 387 ~~G~~~~~Rr~~l~~iGg---f~~~~~~ED~~l~~rl~~~G~ki~~ 429 (482)
+.|.+.++.+++++.+.. ..+....||..++.-+...|.+..-
T Consensus 148 ~~G~~yvls~~~v~~i~~~~~~~~~~~~eDv~iGi~~~~~~i~~~~ 193 (195)
T PF01762_consen 148 CSGGGYVLSSDVVKRIYKASSHTPFFPLEDVFIGILAEKLGIKPIH 193 (195)
T ss_pred CCCCeEEecHHHHHHHHHHhhcCCCCCchHHHHHHHHHHCCCCccC
Confidence 579999999999988742 2233456999999999999876543
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 31 (GH31 from CAZY) comprises enzymes with a number of known activities; N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase (2.4.1.149 from EC); beta-1,3-galactosyltransferase (2.4.1 from EC); fucose-specific beta-1,3-N-acetylglucosaminyltransferase (2.4.1 from EC); globotriosylceramide beta-1,3-GalNAc transferase (2.4.1.79 from EC) [, ].; GO: 0008378 galactosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane |
| >cd00218 GlcAT-I Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis | Back alignment and domain information |
|---|
Probab=94.31 E-value=0.63 Score=43.80 Aligned_cols=102 Identities=15% Similarity=0.130 Sum_probs=64.9
Q ss_pred CeEEEEeecCCch---HHHHHHHHHHHhCCCCCCceEEEEEcCCC--CHHHHHHHHHHHHHhhhCCCeEEEEeccCC---
Q 011596 221 PMVLVQIPMCNEK---EVYQQSIAAVCNLDWPKSKILIQVLDDSD--DPTAQTLIKEEVLKWQEAGANIVYRHRILR--- 292 (482)
Q Consensus 221 P~VsViIP~yne~---~~l~~tL~Sll~q~yp~~~~~IiVvDdss--dd~t~~~~~~~~~~~~~~~v~vv~~~~~~~--- 292 (482)
|.+-+|.|+|... ..|.+.-..+..- |+ +.-|||+|+. ++.+.++++ ..|+...+..-..+
T Consensus 1 p~i~vVTPTy~R~~Q~~~LtRLa~TL~lV--p~--l~WIVVEd~~~~t~~va~lL~-------~sgl~y~HL~~~~~~~~ 69 (223)
T cd00218 1 PTIYVVTPTYARPVQKAELTRLAHTLRLV--PP--LHWIVVEDSEEKTPLVAELLR-------RSGLMYTHLNAKTPSDP 69 (223)
T ss_pred CeEEEECCCCccchhhHHHHHHHHHHhcC--Cc--eEEEEEeCCCCCCHHHHHHHH-------HcCCceEEeccCCCCCc
Confidence 5789999999987 3444443344332 43 6667888864 556666665 56776665533222
Q ss_pred CCC---ccccHHHHhhhccc----CCceEEEEEcCCCCCChHHHHHHH
Q 011596 293 DGY---KAGNLKSAMNCSYV----KDYEFVAIFDADFQPNPDFLRRTV 333 (482)
Q Consensus 293 ~g~---Ka~aln~al~~~~~----a~~d~Vl~lDaD~~~~pd~L~~lv 333 (482)
+.. -....|.|++.+.. ...-+|.|.|+|...+-+..+++-
T Consensus 70 ~~~~~rg~~qRn~AL~~ir~~~~~~~~GVVyFADDdN~Ysl~lF~emR 117 (223)
T cd00218 70 TWLKPRGVEQRNLALRWIREHLSAKLDGVVYFADDDNTYDLELFEEMR 117 (223)
T ss_pred ccCCcccHHHHHHHHHHHHhccccCcceEEEEccCCCcccHHHHHHHh
Confidence 111 12457888887532 345699999999999888777743
|
Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43). |
| >PF09258 Glyco_transf_64: Glycosyl transferase family 64 domain; InterPro: IPR015338 Members of this entry catalyse the transfer reaction of N-acetylglucosamine and N-acetylgalactosamine from the respective UDP-sugars to the non-reducing end of [glucuronic acid]beta 1-3[galactose]beta 1-O-naphthalenemethanol, an acceptor substrate analogue of the natural common linker of various glycosylaminoglycans | Back alignment and domain information |
|---|
Probab=94.13 E-value=0.2 Score=48.41 Aligned_cols=110 Identities=15% Similarity=0.161 Sum_probs=64.0
Q ss_pred EEEEeec-CCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHH
Q 011596 223 VLVQIPM-CNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLK 301 (482)
Q Consensus 223 VsViIP~-yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln 301 (482)
.||+|-+ |+..+.|.+.|.++.+..+=. ++.|+-.++...+.. .+++..++.+.++.... ..+|
T Consensus 1 fTvvi~t~~~R~~~L~~~l~~l~~~~~l~-~IvVvWn~~~~~P~~--------~~~~~~~vpV~~~~~~~------nsLn 65 (247)
T PF09258_consen 1 FTVVINTSYKRSDLLKRLLRHLASSPSLR-KIVVVWNNPNPPPPS--------SKWPSTGVPVRVVRSSR------NSLN 65 (247)
T ss_dssp EEEEEEE-SS-HHHHHHHHHHHTTSTTEE-EEEEEEE-TS--THH--------HHHT---S-EEEEEESS------HHGG
T ss_pred CEEEEEecccchHHHHHHHHHHHcCCCCC-eEEEEeCCCCCCCcc--------cccCCCCceEEEEecCC------ccHH
Confidence 3788888 999999999999997665532 444444453333322 22334556666653221 1222
Q ss_pred HHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeee
Q 011596 302 SAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQAR 348 (482)
Q Consensus 302 ~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~ 348 (482)
.=+.-...-+.|-|+.+|+|..++++.|+.......++|+ -+|+..
T Consensus 66 nRF~p~~~i~T~AVl~~DDDv~~~~~~l~faF~~W~~~pd-rlVGf~ 111 (247)
T PF09258_consen 66 NRFLPDPEIETDAVLSLDDDVMLSCDELEFAFQVWREFPD-RLVGFP 111 (247)
T ss_dssp GGGS--TT--SSEEEEEETTEEE-HHHHHHHHHHHCCSTT-SEEES-
T ss_pred hcCcCccccCcceEEEecCCcccCHHHHHHHHHHHHhChh-heeCCc
Confidence 2222111456899999999999999999999999998887 344443
|
They are also required for the biosynthesis of heparan-sulphate []. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0031227 intrinsic to endoplasmic reticulum membrane; PDB: 1ON6_B 1OMZ_B 1OMX_B 1ON8_B. |
| >PF02434 Fringe: Fringe-like; InterPro: IPR003378 The Notch receptor is a large, cell surface transmembrane protein involved in a wide variety of developmental processes in higher organisms [] | Back alignment and domain information |
|---|
Probab=93.88 E-value=0.28 Score=47.58 Aligned_cols=110 Identities=16% Similarity=0.068 Sum_probs=56.9
Q ss_pred cCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHHHHhhhhhhhhhhhhhhccccccccccc
Q 011596 309 VKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQQVNGVFINFFGFN 388 (482)
Q Consensus 309 ~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (482)
..+.+|.+++|+|+.+..+-|.+++..+. |+-...-|.......... ..+..... . ......+...
T Consensus 84 ~~~~~Wf~~~DDDtyv~~~~L~~~L~~~~--~~~~~yiG~~~~~~~~~~-~~~~~~~~----------~-~~~~~~f~~G 149 (252)
T PF02434_consen 84 NSDKDWFCFADDDTYVNVENLRRLLSKYD--PSEPIYIGRPSGDRPIEI-IHRFNPNK----------S-KDSGFWFATG 149 (252)
T ss_dssp HHT-SEEEEEETTEEE-HHHHHHHHTTS---TTS--EEE-EE----------------------------------EE-G
T ss_pred cCCceEEEEEeCCceecHHHHHHHHhhCC--CccCEEeeeeccCcccee-eccccccc----------c-CcCceEeeCC
Confidence 45779999999999999999999999885 443444344322211111 00000000 0 0000112246
Q ss_pred cceEeeeHHHHHHcC------CCCCC----CchhHHHHHHHHHH-CCCcEEEecc
Q 011596 389 GTAGVWRIKALEDSG------GWMER----TTVEDMDIAVRAHL-RGWKFIFLND 432 (482)
Q Consensus 389 G~~~~~Rr~~l~~iG------gf~~~----~~~ED~~l~~rl~~-~G~ki~~~~~ 432 (482)
|+++++.|.+++++. .+... ...||+.++.-+.. .|.+....+.
T Consensus 150 GaG~vlSr~~~~k~~~~~~~~~~~~~~~~~~~~dD~~lG~ci~~~lgv~lt~s~~ 204 (252)
T PF02434_consen 150 GAGYVLSRALLKKMSPWASGCKCPSTDEKIRLPDDMTLGYCIENLLGVPLTHSPL 204 (252)
T ss_dssp GG-EEEEHHHHHHHHHHHTT-TTS--TTTTTS-HHHHHHHHHHHTT---EEE-TT
T ss_pred CeeHHHhHHHHHHHhhhcccccccCCcCCCCCcccChhhhhHHhcCCcceeechh
Confidence 889999999999972 23222 34799999999999 8988877554
|
It becomes activated when its extracellular region binds to ligands located on adjacent cells. Much of this extracellular region is composed of EGF-like repeats, many of which can be O-fucosylated. A number of these O-fucosylated repeats can in turn be further modified by the action of a beta-1,3-N-acetylglucosaminyltransferase enzyme known as Fringe []. Fringe potentiates the activation of Notch by Delta ligands, while inhibiting activation by Serrate/Jagged ligands. This regulation of Notch signalling by Fringe is important in many processes []. Four distinct Fringe proteins have so far been studied in detail; Drosophila Fringe (Dfng) and its three mammalian homologues Lunatic Fringe (Lfng), Radical Fringe (Rfng) and Manic Fringe (Mfng). Dfng, Lfng and Rfng have all been shown to play important roles in developmental processes within their host, though the phenotype of mutants can vary between species e.g. Rfng mutants are retarded in wing development in chickens, but have no obvious phenotype in mice [, , ]. Mfng mutants have not, so far, been charcterised. Biochemical studies indicate that the Fringe proteins are fucose-specific transferases requiring manganese for activity and utilising UDP-N-acetylglucosamine as a donor substrate []. The three mammalian proteins show distinct variations in their catalytic efficiencies with different substrates. Dfng is a glucosaminyltransferase that controls the response of the Notch receptor to specific ligands which is localised to the Golgi apparatus [] (not secreted as previously thought). Modification of Notch occurs through glycosylation by Dfng. This entry consists of Fringe proteins and related glycosyltransferase enzymes including: Beta-1,3-glucosyltransferase, which glucosylates O-linked fucosylglycan on thrombospondin type 1 repeat domains []. Core 1 beta1,3-galactosyltransferase 1, generates the core T antigen, which is a precursor for many extended O-glycans in glycoproteins and plays a central role in many processes, such as angiogenesis, thrombopoiesis and kidney homeostasis development []. ; GO: 0016757 transferase activity, transferring glycosyl groups, 0016020 membrane; PDB: 2J0B_A 2J0A_A. |
| >TIGR00466 kdsB 3-deoxy-D-manno-octulosonate cytidylyltransferase | Back alignment and domain information |
|---|
Probab=93.81 E-value=1.9 Score=41.24 Aligned_cols=184 Identities=11% Similarity=0.100 Sum_probs=90.4
Q ss_pred CchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHhhhcccC
Q 011596 231 NEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVK 310 (482)
Q Consensus 231 ne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al~~~~~a 310 (482)
+....+..+++.+.+.. -+++ |++.|+ +...+.+ + ..+++++.. .....||. ..+..+++.....
T Consensus 22 ~GkPli~~~le~~~~~~--~d~V-vVvt~~---~~i~~~~----~---~~g~~~v~~-~~~~~~Gt-~r~~~~~~~l~~~ 86 (238)
T TIGR00466 22 FGKPMIVHVAENANESG--ADRC-IVATDD---ESVAQTC----Q---KFGIEVCMT-SKHHNSGT-ERLAEVVEKLALK 86 (238)
T ss_pred CCcCHHHHHHHHHHhCC--CCeE-EEEeCH---HHHHHHH----H---HcCCEEEEe-CCCCCChh-HHHHHHHHHhCCC
Confidence 34567888888877643 2243 334432 2333222 2 345665532 22223322 2333344321123
Q ss_pred CceEEEEEcCCC-CCChHHHHHHHHHhhcCCCeEEEeeeeeeecCC----CChHHHHHhh-hhh--hhhh---hhhhh--
Q 011596 311 DYEFVAIFDADF-QPNPDFLRRTVPHFKDNEELGLVQARWSFVNKD----ENLLTRLQDI-NLS--FHFE---VEQQV-- 377 (482)
Q Consensus 311 ~~d~Vl~lDaD~-~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~----~~~~~~~~~~-~~~--~~~~---~~~~~-- 377 (482)
+.|+|+++|+|. .++|+.+.+++..+.+ ++.+++.......+.. .+......+. ... +... ..+..
T Consensus 87 ~~d~Vli~~gD~Pli~~~~I~~li~~~~~-~~~~~a~~~~~~~d~~~~~~p~~vk~v~~~~g~alyfsr~~ip~~R~~~~ 165 (238)
T TIGR00466 87 DDERIVNLQGDEPFIPKEIIRQVADNLAT-KNVPMAALAVKIHDAEEAFNPNAVKVVLDSQGYALYFSRSLIPFDRDFFA 165 (238)
T ss_pred CCCEEEEEcCCcCcCCHHHHHHHHHHHhc-CCCCEEEEeeecCCHHHccCCCceEEEeCCCCeEEEecCCCCCCCCCccc
Confidence 568999999998 5799999999999853 3333333322211100 0000000000 000 0000 00000
Q ss_pred --ccccccccccccceEeeeHHHHHHcCCCCCC--CchhHHHHHHHHHHCCCcEEEec
Q 011596 378 --NGVFINFFGFNGTAGVWRIKALEDSGGWMER--TTVEDMDIAVRAHLRGWKFIFLN 431 (482)
Q Consensus 378 --~~~~~~~~~~~G~~~~~Rr~~l~~iGgf~~~--~~~ED~~l~~rl~~~G~ki~~~~ 431 (482)
.......+-..-....||+++|++.-.+.+. ...|+.+ .+|+..+|+++....
T Consensus 166 ~~~tpq~~~~~~h~Giy~~~~~~L~~~~~~~~~~le~~e~le-qlr~le~g~~i~~~~ 222 (238)
T TIGR00466 166 KRQTPVGDNLLRHIGIYGYRAGFIEEYVAWKPCVLEEIEKLE-QLRVLYYGEKIHVKI 222 (238)
T ss_pred ccccccccceeEEEEEEeCCHHHHHHHHhCCCCcccccchhH-HHhhhhcCCceEEEE
Confidence 0000000112344578999999997666544 2346666 578889999997755
|
|
| >COG1212 KdsB CMP-2-keto-3-deoxyoctulosonic acid synthetase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=93.33 E-value=4 Score=38.46 Aligned_cols=179 Identities=13% Similarity=0.151 Sum_probs=99.6
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHhhhcccCCce
Q 011596 234 EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKDYE 313 (482)
Q Consensus 234 ~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al~~~~~a~~d 313 (482)
..+.++.+...+.. -++ |+|.-| |....+.++ ..|..++.......+| ..-+..+++.....+.+
T Consensus 29 pmI~rV~e~a~~s~--~~r--vvVATD--de~I~~av~-------~~G~~avmT~~~h~SG--TdR~~Ev~~~l~~~~~~ 93 (247)
T COG1212 29 PMIVRVAERALKSG--ADR--VVVATD--DERIAEAVQ-------AFGGEAVMTSKDHQSG--TDRLAEVVEKLGLPDDE 93 (247)
T ss_pred hHHHHHHHHHHHcC--CCe--EEEEcC--CHHHHHHHH-------HhCCEEEecCCCCCCc--cHHHHHHHHhcCCCcce
Confidence 46666776666543 223 434332 344444444 4567776654444555 34466666654345789
Q ss_pred EEEEEcCCC-CCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHHH----Hhh-hhhhhhhhhhh--hcccccccc
Q 011596 314 FVAIFDADF-QPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRL----QDI-NLSFHFEVEQQ--VNGVFINFF 385 (482)
Q Consensus 314 ~Vl~lDaD~-~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~~----~~~-~~~~~~~~~~~--~~~~~~~~~ 385 (482)
+|+.+-+|. .++|..+..++..+++ .+.++++......+..+-+-... ..- .++.+|..... .....+. .
T Consensus 94 iIVNvQGDeP~i~p~~I~~~~~~L~~-~~~~~aTl~~~i~~~ee~~nPN~VKvV~d~~g~ALYFSRs~iP~~rd~~~~-~ 171 (247)
T COG1212 94 IIVNVQGDEPFIEPEVIRAVAENLEN-SNADMATLAVKITDEEEAFNPNVVKVVLDKEGYALYFSRAPIPYGRDNFGG-T 171 (247)
T ss_pred EEEEccCCCCCCCHHHHHHHHHHHHh-CCcceeeeeeecCCHHHhcCCCcEEEEEcCCCcEEEEEcCCCCCcccccCC-c
Confidence 999999998 6699999999999986 47777776655443322110000 000 11211111100 0000000 1
Q ss_pred cccc--ceEeeeHHHHHHcCCCCCCCc--hhHHHHHHHHHHCCCcEEEe
Q 011596 386 GFNG--TAGVWRIKALEDSGGWMERTT--VEDMDIAVRAHLRGWKFIFL 430 (482)
Q Consensus 386 ~~~G--~~~~~Rr~~l~~iGgf~~~~~--~ED~~l~~rl~~~G~ki~~~ 430 (482)
++-. ....||++++++...+.+... .|+.+ .+|+..+|.++...
T Consensus 172 p~l~HIGIYayr~~~L~~f~~~~ps~LE~~E~LE-QLR~Le~G~kI~v~ 219 (247)
T COG1212 172 PFLRHIGIYAYRAGFLERFVALKPSPLEKIESLE-QLRVLENGEKIHVE 219 (247)
T ss_pred chhheeehHHhHHHHHHHHHhcCCchhHHHHHHH-HHHHHHcCCeeEEE
Confidence 1222 235689999999888766422 24444 67888899998663
|
|
| >KOG1476 consensus Beta-1,3-glucuronyltransferase B3GAT1/SQV-8 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=93.25 E-value=1.2 Score=43.83 Aligned_cols=105 Identities=16% Similarity=0.202 Sum_probs=69.4
Q ss_pred CCeEEEEeecCCch---HHHHHHHHHHHhCCCCCCceEEEEEcCC--CCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCC
Q 011596 220 FPMVLVQIPMCNEK---EVYQQSIAAVCNLDWPKSKILIQVLDDS--DDPTAQTLIKEEVLKWQEAGANIVYRHRILRDG 294 (482)
Q Consensus 220 ~P~VsViIP~yne~---~~l~~tL~Sll~q~yp~~~~~IiVvDds--sdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g 294 (482)
.|.|-||.|+|+.. ..|.+.-..+. + .|+ +.-|||+|+ ..+.+..+++ ..|+...+.....+.+
T Consensus 86 ~~~iivVTPTY~R~~q~~~LtRlanTL~-~-V~n--LhWIVVEd~~~~~p~v~~~L~-------rtgl~ythl~~~t~~~ 154 (330)
T KOG1476|consen 86 LPTIIVVTPTYVRPVQAAELTRLANTLR-L-VPN--LHWIVVEDGEGTTPEVSGILR-------RTGLPYTHLVHKTPMG 154 (330)
T ss_pred CccEEEEcccccchhHHHHHHHHHHHHh-h-cCC--eeEEEEecCCCCCHHHHHHHH-------HcCCceEEEeccCCCC
Confidence 78999999999998 23333322332 2 244 566788885 5666666666 5677777766666666
Q ss_pred Cc----cccHHHHhhhcc-----c-CCceEEEEEcCCCCCChHHHHHHHHHh
Q 011596 295 YK----AGNLKSAMNCSY-----V-KDYEFVAIFDADFQPNPDFLRRTVPHF 336 (482)
Q Consensus 295 ~K----a~aln~al~~~~-----~-a~~d~Vl~lDaD~~~~pd~L~~lv~~f 336 (482)
+| -.+.|.|++.+. . ...-+|.|-|+|...+-+...+ ++..
T Consensus 155 ~~~~rg~~qRn~aL~~ir~~~~~~~~~~GVVyFADDdN~YdleLF~e-iR~v 205 (330)
T KOG1476|consen 155 YKARRGWEQRNMALRWIRSRILRHHKLEGVVYFADDDNTYDLELFEE-IRNV 205 (330)
T ss_pred CccccchhHHHHHHHHHHHhcccccccceEEEEccCCcchhHHHHHH-Hhcc
Confidence 66 346788887642 2 3456888899999988777766 4433
|
|
| >PLN02458 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=92.33 E-value=2.6 Score=41.81 Aligned_cols=104 Identities=11% Similarity=0.039 Sum_probs=62.7
Q ss_pred CCCeEEEEeecCC-ch---HHHHHHHHHHHhCCCCCCceEEEEEcCC-CCHHHHHHHHHHHHHhhhCCCeEEEEeccCCC
Q 011596 219 FFPMVLVQIPMCN-EK---EVYQQSIAAVCNLDWPKSKILIQVLDDS-DDPTAQTLIKEEVLKWQEAGANIVYRHRILRD 293 (482)
Q Consensus 219 ~~P~VsViIP~yn-e~---~~l~~tL~Sll~q~yp~~~~~IiVvDds-sdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~ 293 (482)
..+.+-||.|+|. .. ..|.+.-..+..-.+ + +.-|||+|+ ..+.+.++++ ..|+...+..-..+-
T Consensus 110 ~~rlIivVTPTY~rR~~Q~a~LTRLahTL~lVp~-p--L~WIVVEd~~~t~~va~lLr-------rsGl~y~HL~~k~~~ 179 (346)
T PLN02458 110 PRRLVIIVTPISTKDRYQGVLLRRLANTLRLVPP-P--LLWIVVEGQSDSEEVSEMLR-------KTGIMYRHLVFKENF 179 (346)
T ss_pred CCceEEEECCCCCCcchhHHHHHHHHHHHhcCCC-C--ceEEEEeCCCCCHHHHHHHH-------HcCCceEEeccCCCC
Confidence 4567999999998 33 344444444443322 3 445677764 4445555555 567765554322221
Q ss_pred ----CCccccHHHHhhhccc-CCceEEEEEcCCCCCChHHHHHH
Q 011596 294 ----GYKAGNLKSAMNCSYV-KDYEFVAIFDADFQPNPDFLRRT 332 (482)
Q Consensus 294 ----g~Ka~aln~al~~~~~-a~~d~Vl~lDaD~~~~pd~L~~l 332 (482)
+......|.|++.+.. ...-+|.|.|+|...+-+..+++
T Consensus 180 ~~~~~r~~~QRN~AL~~IR~h~l~GVVyFADDdNtYsl~LFeEm 223 (346)
T PLN02458 180 TDPEAELDHQRNLALRHIEHHKLSGIVHFAGLSNVYDLDFFDEI 223 (346)
T ss_pred CCccchhHHHHHHHHHHHHhcCcCceEEEccCCCcccHHHHHHH
Confidence 1123458889987532 23568999999999888777764
|
|
| >PF02364 Glucan_synthase: 1,3-beta-glucan synthase component ; InterPro: IPR003440 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=92.10 E-value=0.28 Score=54.36 Aligned_cols=161 Identities=14% Similarity=0.128 Sum_probs=92.2
Q ss_pred CccccHHHHhhhcccCCceEEEEEcCC--CCCCh-HHHHHHHHHhhc-----------------CCCeEEEeeeeeeecC
Q 011596 295 YKAGNLKSAMNCSYVKDYEFVAIFDAD--FQPNP-DFLRRTVPHFKD-----------------NEELGLVQARWSFVNK 354 (482)
Q Consensus 295 ~Ka~aln~al~~~~~a~~d~Vl~lDaD--~~~~p-d~L~~lv~~f~~-----------------~p~v~~V~~~~~~~n~ 354 (482)
||..|.|+|+- -.+||++-.+|+. ..++. =-++.+++.|++ .+.+.+++.+......
T Consensus 275 GK~eNQNhaii---F~rGe~lQ~IDmNQDnYleE~lK~rnlL~Ef~~~~~~~~~~~~~~~~~~~~~~~aIlG~RE~IFs~ 351 (817)
T PF02364_consen 275 GKPENQNHAII---FTRGEYLQTIDMNQDNYLEEALKMRNLLEEFEEMHGDSSSPYIPGIEEEGKRPVAILGFREHIFSE 351 (817)
T ss_pred CCccccceeEE---EEccccccccccchhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCCccccCCCCceEecccceEecC
Confidence 69999999987 5899999999985 33332 224567777764 1356788888777666
Q ss_pred CCChHHHHHhhhhhhhhhhhhhhccccccccccccceEeeeHHHHHHcCCCCCC----CchhHHHHHHHHHHCCCcEEEe
Q 011596 355 DENLLTRLQDINLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEDSGGWMER----TTVEDMDIAVRAHLRGWKFIFL 430 (482)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~iGgf~~~----~~~ED~~l~~rl~~~G~ki~~~ 430 (482)
..+.++......-....+..+...+...... --|+-=++.+-....-||.+.. ++.||+.-++-...+|.++.+.
T Consensus 352 ~vg~L~~~aa~qE~~F~Tl~qR~la~p~~rl-HYGHPD~~n~~f~~TRGGvSKAsk~lhLsEDIfaG~n~~lRGG~i~h~ 430 (817)
T PF02364_consen 352 NVGSLGDFAAGQEQSFGTLFQRTLANPLVRL-HYGHPDVFNRIFMTTRGGVSKASKGLHLSEDIFAGMNATLRGGRIKHC 430 (817)
T ss_pred CcchHHHHhhhhhHHHHHHHHHHHhcchhhc-cCCCchhhhhhheeccCccchHhhcccccHHHHHHHHHHhcCCceeeh
Confidence 5544443332211111111122111111111 1244434444444444666432 7789999999999999999998
Q ss_pred ccceecccCCcCHHHHHHHHHhhhhhhHH
Q 011596 431 NDVECQCELPESYEAYRKQQHRWHSGPMQ 459 (482)
Q Consensus 431 ~~~~~~~~~p~t~~~~~~qr~RW~~G~~q 459 (482)
....|=-..-..+.+...--.+-+.|+-+
T Consensus 431 ey~qcGKGRD~Gf~~I~~F~~KI~~G~GE 459 (817)
T PF02364_consen 431 EYIQCGKGRDVGFNSILNFETKIASGMGE 459 (817)
T ss_pred hhhhcccccccCchhhhhhHhHhcCCccc
Confidence 87665222223344444444445555443
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This is the glycosyltransferase 48 family GT48 from CAZY, which consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase (2.4.1.34 from EC) also known as callose synthase catalyses the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall []. The reaction catalysed is:- UDP-glucose + {1,3-beta-D-glucosyl}(N) = UDP + {1,3-beta-D-glucosyl}(N+1).; GO: 0003843 1,3-beta-D-glucan synthase activity, 0006075 1,3-beta-D-glucan biosynthetic process, 0000148 1,3-beta-D-glucan synthase complex, 0016020 membrane |
| >PF06306 CgtA: Beta-1,4-N-acetylgalactosaminyltransferase (CgtA); InterPro: IPR010446 This family consists of several beta-1,4-N-acetylgalactosaminyltransferase proteins from Campylobacter jejuni [] | Back alignment and domain information |
|---|
Probab=91.52 E-value=0.43 Score=46.90 Aligned_cols=104 Identities=14% Similarity=0.096 Sum_probs=69.1
Q ss_pred eEEEEeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccC--CCC----C
Q 011596 222 MVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRIL--RDG----Y 295 (482)
Q Consensus 222 ~VsViIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~--~~g----~ 295 (482)
.++-.|-+.||...++++|+|++..- ++. | +.-+.++|.|.+++.++.+++|+ -+++.|-.... +.. .
T Consensus 88 ~~~~~iRvKnE~~tl~~si~S~Lpai---~~g-V-I~yNdc~D~t~Eiil~fckkyP~-fip~~Ypy~v~~~n~~~~~n~ 161 (347)
T PF06306_consen 88 NPWAFIRVKNEAMTLAESIESILPAI---DEG-V-IGYNDCTDGTEEIILEFCKKYPS-FIPIKYPYEVIIKNPKSEENS 161 (347)
T ss_pred CcceEEEEcchhhhHHHHHHHHHHHH---hcc-E-EEeecCCCCHHHHHHHHHHhCcc-cccccCcchhhccCCchhhhh
Confidence 46788899999999999999999632 132 4 44444566678999999999985 35554432111 111 1
Q ss_pred ccccHHHHhhhcccCCceEEEEEcCCCCCChHHHHHHH
Q 011596 296 KAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTV 333 (482)
Q Consensus 296 Ka~aln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv 333 (482)
...=.|+++.. ..+++|++=+|+|.+..+.-|-+..
T Consensus 162 l~~YYNy~ls~--ipk~~w~iKID~DhIy~~~KL~ksf 197 (347)
T PF06306_consen 162 LYNYYNYVLSF--IPKNEWAIKIDADHIYDTKKLYKSF 197 (347)
T ss_pred hhhhhhhhhcc--cccceEEEEeccceeecHHHHhhhh
Confidence 11223344442 4678999999999999988874444
|
|
| >TIGR03202 pucB xanthine dehydrogenase accessory protein pucB | Back alignment and domain information |
|---|
Probab=90.88 E-value=2.3 Score=38.92 Aligned_cols=102 Identities=17% Similarity=0.101 Sum_probs=57.6
Q ss_pred CchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHhhhcccC
Q 011596 231 NEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVK 310 (482)
Q Consensus 231 ne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al~~~~~a 310 (482)
+....++.+++.+++... ++ |+|+-+...+......+...+ ..++.++.... ...| ...++..|++.....
T Consensus 24 ~g~~ll~~~i~~~~~~~~--~~--i~vv~~~~~~~~~~~~~~~~~---~~~~~~~~~~~-~~~G-~~~si~~gl~~~~~~ 94 (190)
T TIGR03202 24 GETTLGSASLKTALSSRL--SK--VIVVIGEKYAHLSWLDPYLLA---DERIMLVCCRD-ACEG-QAHSLKCGLRKAEAM 94 (190)
T ss_pred CCccHHHHHHHHHHhCCC--Cc--EEEEeCCccchhhhhhHhhhc---CCCeEEEECCC-hhhh-HHHHHHHHHHHhccC
Confidence 556788888877665332 23 344433333222111111111 23444443221 1223 556777788742223
Q ss_pred CceEEEEEcCCC-CCChHHHHHHHHHhhcCCC
Q 011596 311 DYEFVAIFDADF-QPNPDFLRRTVPHFKDNEE 341 (482)
Q Consensus 311 ~~d~Vl~lDaD~-~~~pd~L~~lv~~f~~~p~ 341 (482)
+.|+++++++|. .++++.+.+++..+..++.
T Consensus 95 ~~d~vlv~~~D~P~v~~~~i~~L~~~~~~~~~ 126 (190)
T TIGR03202 95 GADAVVILLADQPFLTADVINALLALAKRRPD 126 (190)
T ss_pred CCCeEEEEeCCCCCCCHHHHHHHHHHHhhCCC
Confidence 579999999999 6699999999998865443
|
In Bacillus subtilis the expression of this protein, located in an operon with the structural subunits of xanthine dehydrogenase, has been found to be essential for XDH activity. Some members of this family appear to have a distant relationship to the MobA protein involved in molybdopterin biosynthesis, although this may be coincidental. |
| >cd04182 GT_2_like_f GT_2_like_f is a subfamily of the glycosyltransferase family 2 (GT-2) with unknown function | Back alignment and domain information |
|---|
Probab=90.23 E-value=2.7 Score=37.87 Aligned_cols=96 Identities=15% Similarity=0.179 Sum_probs=56.2
Q ss_pred CchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHhhhcccC
Q 011596 231 NEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVK 310 (482)
Q Consensus 231 ne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al~~~~~a 310 (482)
+....++.+++.+.... -++ |+|+-+.......+.+ . ..++.++. ......|...++..|++.. ..
T Consensus 24 ~g~~li~~~i~~l~~~~--~~~--i~vv~~~~~~~~~~~~----~---~~~~~~~~--~~~~~~G~~~~i~~al~~~-~~ 89 (186)
T cd04182 24 DGKPLLRHALDAALAAG--LSR--VIVVLGAEADAVRAAL----A---GLPVVVVI--NPDWEEGMSSSLAAGLEAL-PA 89 (186)
T ss_pred CCeeHHHHHHHHHHhCC--CCc--EEEECCCcHHHHHHHh----c---CCCeEEEe--CCChhhCHHHHHHHHHHhc-cc
Confidence 44568888888887752 223 3333332222222111 1 23444332 2222223667788888742 11
Q ss_pred CceEEEEEcCCC-CCChHHHHHHHHHhhcCC
Q 011596 311 DYEFVAIFDADF-QPNPDFLRRTVPHFKDNE 340 (482)
Q Consensus 311 ~~d~Vl~lDaD~-~~~pd~L~~lv~~f~~~p 340 (482)
+.|+++++.+|+ .++++.+++++..+..++
T Consensus 90 ~~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~ 120 (186)
T cd04182 90 DADAVLILLADQPLVTAETLRALIDAFREDG 120 (186)
T ss_pred cCCEEEEEeCCCCCCCHHHHHHHHHHHHhCC
Confidence 379999999999 679999999999886433
|
GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families. |
| >PF12804 NTP_transf_3: MobA-like NTP transferase domain; PDB: 3FWW_A 2XME_D 2XMH_C 2DPW_A 2WAW_A 2OI5_B 1HV9_B 1FWY_A 2OI6_A 2OI7_B | Back alignment and domain information |
|---|
Probab=89.62 E-value=2.4 Score=37.38 Aligned_cols=96 Identities=17% Similarity=0.243 Sum_probs=61.4
Q ss_pred eecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHhhh
Q 011596 227 IPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNC 306 (482)
Q Consensus 227 IP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al~~ 306 (482)
+|. +....++.+++.+.+... ++ |+|+-.. +...+.+ ...+++++.. +....+-..++..|++.
T Consensus 19 ~~i-~g~~li~~~l~~l~~~~~--~~--Ivvv~~~--~~~~~~~-------~~~~~~~v~~--~~~~~G~~~sl~~a~~~ 82 (160)
T PF12804_consen 19 LPI-GGKPLIERVLEALREAGV--DD--IVVVTGE--EEIYEYL-------ERYGIKVVVD--PEPGQGPLASLLAALSQ 82 (160)
T ss_dssp SEE-TTEEHHHHHHHHHHHHTE--SE--EEEEEST--HHHHHHH-------TTTTSEEEE---STSSCSHHHHHHHHHHT
T ss_pred eeE-CCccHHHHHHHHhhccCC--ce--EEEecCh--HHHHHHH-------hccCceEEEe--ccccCChHHHHHHHHHh
Confidence 444 666788888888877642 23 4444433 3232222 1456776643 22223477788888873
Q ss_pred cccCCceEEEEEcCCC-CCChHHHHHHHHHhhcCC
Q 011596 307 SYVKDYEFVAIFDADF-QPNPDFLRRTVPHFKDNE 340 (482)
Q Consensus 307 ~~~a~~d~Vl~lDaD~-~~~pd~L~~lv~~f~~~p 340 (482)
..+.+.++++.+|. .++++.+++++..+.+++
T Consensus 83 --~~~~~~vlv~~~D~p~~~~~~l~~l~~~~~~~~ 115 (160)
T PF12804_consen 83 --LPSSEPVLVLPCDQPFLSPELLRRLLEALEKSP 115 (160)
T ss_dssp --STTSSEEEEEETTETTS-HHHHHHHHHHHHHTT
T ss_pred --cccCCCcEEEeCCccccCHHHHHHHHHHHhccC
Confidence 22889999999999 569999999999997544
|
... |
| >cd02540 GT2_GlmU_N_bac N-terminal domain of bacterial GlmU | Back alignment and domain information |
|---|
Probab=89.08 E-value=5.2 Score=37.50 Aligned_cols=96 Identities=15% Similarity=0.192 Sum_probs=59.0
Q ss_pred eecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHhhh
Q 011596 227 IPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNC 306 (482)
Q Consensus 227 IP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al~~ 306 (482)
+|.-+ ...+..+++++.+... .++.| |+ ....+...+.+. ..++.++. +.... +.++++..|+..
T Consensus 21 ~~v~g-kpli~~~i~~l~~~~i--~~i~i-v~-~~~~~~i~~~~~-------~~~~~~~~--~~~~~-g~~~ai~~a~~~ 85 (229)
T cd02540 21 HPLAG-KPMLEHVLDAARALGP--DRIVV-VV-GHGAEQVKKALA-------NPNVEFVL--QEEQL-GTGHAVKQALPA 85 (229)
T ss_pred ceeCC-ccHHHHHHHHHHhCCC--CeEEE-EE-CCCHHHHHHHhC-------CCCcEEEE--CCCCC-CCHHHHHHHHHh
Confidence 34444 4788999999887553 23333 33 222333333222 23455443 33333 377888888874
Q ss_pred cccCCceEEEEEcCCC-CCChHHHHHHHHHhhc
Q 011596 307 SYVKDYEFVAIFDADF-QPNPDFLRRTVPHFKD 338 (482)
Q Consensus 307 ~~~a~~d~Vl~lDaD~-~~~pd~L~~lv~~f~~ 338 (482)
. ..+.|.++++++|. .+++..+.+++..+.+
T Consensus 86 ~-~~~~~~vli~~~D~p~~~~~~i~~l~~~~~~ 117 (229)
T cd02540 86 L-KDFEGDVLVLYGDVPLITPETLQRLLEAHRE 117 (229)
T ss_pred h-ccCCCeEEEEeCCccccCHHHHHHHHHHHHh
Confidence 2 11268899999998 5688999999988865
|
The N-terminal domain of N-Acetylglucosamine-1-phosphate uridyltransferase (GlmU). GlmU is an essential bacterial enzyme with both an acetyltransferase and an uridyltransferase activity which have been mapped to the C-terminal and N-terminal domains, respectively. This family represents the N-terminal uridyltransferase. GlmU performs the last two steps in the synthesis of UDP-N-acetylglucosamine (UDP-GlcNAc), which is an essential precursor in both the peptidoglycan and the lipopolysaccharide metabolic pathways in Gram-positive and Gram-negative bacteria, respectively. |
| >PF04666 Glyco_transf_54: N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region; InterPro: IPR006759 The complex-type of oligosaccharides are synthesised through elongation by glycosyltransferases after trimming of the precursor oligosaccharides transferred to proteins in the endoplasmic reticulum | Back alignment and domain information |
|---|
Probab=88.78 E-value=4.9 Score=39.89 Aligned_cols=118 Identities=19% Similarity=0.273 Sum_probs=68.5
Q ss_pred CCeEEEEeecCCch--HHHHHHHHHHHhCCCCCC--ceEEEE-EcCCCCHHHHHHHHHHHHHhhh---CC-CeEEEEecc
Q 011596 220 FPMVLVQIPMCNEK--EVYQQSIAAVCNLDWPKS--KILIQV-LDDSDDPTAQTLIKEEVLKWQE---AG-ANIVYRHRI 290 (482)
Q Consensus 220 ~P~VsViIP~yne~--~~l~~tL~Sll~q~yp~~--~~~IiV-vDdssdd~t~~~~~~~~~~~~~---~~-v~vv~~~~~ 290 (482)
-++++|=||+-..+ ..+..||.|+++.--|.+ .+.|+| +-|.+.+....+.++....+++ .| +.++..+..
T Consensus 51 ~~~L~IGIpTV~R~~~sYL~~TL~SLl~~ls~~Er~~i~IvVllAd~Dp~~~~~~~~~i~~~f~~~i~sG~l~VI~~p~~ 130 (297)
T PF04666_consen 51 GKKLCIGIPTVKREKESYLLDTLASLLDGLSPEERKDIVIVVLLADTDPDYHPSVAQNISTRFADHIESGLLEVISPPPS 130 (297)
T ss_pred CCeEEEEecccccCCCchHHHHHHHHHHhCCHHHhcCeEEEEEecCCChhhhHHHHHHHHHHhHHHHHhCceEEEecccc
Confidence 44699999998876 899999999998666643 233333 4444433333444433333321 22 233321111
Q ss_pred ---C-----CC-C--------CccccHHHHh--hhcccCCceEEEEEcCCCCCChHHHHHHHHHhhc
Q 011596 291 ---L-----RD-G--------YKAGNLKSAM--NCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKD 338 (482)
Q Consensus 291 ---~-----~~-g--------~Ka~aln~al--~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~ 338 (482)
. .+ | .-..++.+++ ... ...++|.+.+.+|.+..|+|+.++......
T Consensus 131 ~Yp~l~~l~~~~~d~~~rv~wrsKq~lDya~Lm~y~-~~~~~YyL~LEDDVia~~~f~~~i~~~v~~ 196 (297)
T PF04666_consen 131 YYPDLDNLKRNFGDSEERVRWRSKQNLDYAFLMNYC-QNLGDYYLQLEDDVIAAPGFLSRIKRFVEA 196 (297)
T ss_pred cCCChhhhhhcccChhhhhhHHHhhcccHHHHHHHH-HhcCCeEEEecCCeEechhHHHHHHHHHHH
Confidence 0 00 0 0011333322 211 346899999999999999999999888865
|
N-Acetylglucosaminyltransferases (GnTs) take part in the formation of branches in the biosynthesis of complex-type sugar chains. In vertebrates, six GnTs, designated as GnT-I to -VI, which catalyse the transfer of GlcNAc to the core mannose residues of Asn-linked sugar chains, have been identified. GnT-IV (2.4.1.145 from EC) catalyzes the transfer of GlcNAc from UDP-GlcNAc to the GlcNAc1-2Man1-3 arm of core oligosaccharide [Gn2(22)core oligosaccharide] and forms a GlcNAc1-4(GlcNAc1-2)Man1-3 structure on the core oligosaccharide (Gn3(2,4,2)core oligosaccharide). In some members the conserved region occupies all but the very N-terminal, where there is a signal sequence on all members. For other members the conserved region does not occupy the entire protein but is still to the N-terminal end of the protein [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0016020 membrane |
| >TIGR03310 matur_ygfJ molybdenum hydroxylase accessory protein, YgfJ family | Back alignment and domain information |
|---|
Probab=88.44 E-value=5.5 Score=36.05 Aligned_cols=97 Identities=12% Similarity=0.140 Sum_probs=56.7
Q ss_pred CchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHhhhcccC
Q 011596 231 NEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVK 310 (482)
Q Consensus 231 ne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al~~~~~a 310 (482)
+....+..+++.+.+... +++ ++|+.+..+. . .+.... ..++.++. .+....|...++..|++. ..
T Consensus 23 ~g~pll~~~i~~l~~~~~--~~i-ivv~~~~~~~-~---~~~~~~---~~~v~~v~--~~~~~~g~~~si~~~l~~--~~ 88 (188)
T TIGR03310 23 KGKTILEHVVDNALRLFF--DEV-ILVLGHEADE-L---VALLAN---HSNITLVH--NPQYAEGQSSSIKLGLEL--PV 88 (188)
T ss_pred CCeeHHHHHHHHHHHcCC--CcE-EEEeCCcHHH-H---HHHhcc---CCCeEEEE--CcChhcCHHHHHHHHhcC--CC
Confidence 446788888888876542 233 3344443222 1 111111 23455443 222212255666667662 24
Q ss_pred CceEEEEEcCCC-CCChHHHHHHHHHhhcCCC
Q 011596 311 DYEFVAIFDADF-QPNPDFLRRTVPHFKDNEE 341 (482)
Q Consensus 311 ~~d~Vl~lDaD~-~~~pd~L~~lv~~f~~~p~ 341 (482)
+.|+++++++|. .++++.+++++..+..++.
T Consensus 89 ~~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~ 120 (188)
T TIGR03310 89 QSDGYLFLLGDQPFVTPDIIQLLLEAFALKND 120 (188)
T ss_pred CCCEEEEEeCCcCCCCHHHHHHHHHHHHhCCC
Confidence 578999999999 5799999999998765454
|
Members of this protein family are probable accessory proteins for the biosynthesis of enzymes related to xanthine dehydrogenase. Comparative genomics suggests a role in the maturation of selenium-dependent molybdenum hydroxylases, although a tenuous alternative hypothesis is a role for this protein (with a requirement for SelD, the selenium donor protein in the selenocysteine and selenouridine biosynthesis pathways) metabolizing a selenium-containing substrate such as selenate. |
| >PF03214 RGP: Reversibly glycosylated polypeptide; InterPro: IPR004901 Alpha-1,4-glucan-protein synthase catalyses the reaction: |
Back alignment and domain information |
|---|
Probab=88.09 E-value=0.22 Score=49.12 Aligned_cols=99 Identities=13% Similarity=0.149 Sum_probs=53.6
Q ss_pred eEEEEeecCCch-HHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEecc---------C
Q 011596 222 MVLVQIPMCNEK-EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRI---------L 291 (482)
Q Consensus 222 ~VsViIP~yne~-~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~---------~ 291 (482)
.|.|+||+-+.. ...-+.-+.+++ + +++|||-|++......+.+ |.......+. .
T Consensus 9 ~~divi~~~~~~l~~~~~~wr~~~~----~--~hliiv~d~~~~~~~~~p~---------g~~~~~y~~~di~~~lg~~~ 73 (348)
T PF03214_consen 9 EVDIVIPALRPNLTDFLEEWRPFFS----P--YHLIIVQDPDPNEEIKVPE---------GFDYEVYNRNDIERVLGAKT 73 (348)
T ss_pred cccEEeecccccHHHHHHHHHHhhc----c--eeEEEEeCCCccccccCCc---------ccceeeecHhhHHhhcCCcc
Confidence 589999998843 233333444443 2 4466666654443322211 2211111111 1
Q ss_pred CCCCccc-cHHHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhc
Q 011596 292 RDGYKAG-NLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKD 338 (482)
Q Consensus 292 ~~g~Ka~-aln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~ 338 (482)
...+|.. ..+.|+- .++.+|++++|+|+.+..|.--..+..+.+
T Consensus 74 ~i~~~~~a~R~fGyL---~s~~~yivsiDDD~~P~~D~~g~~~~~v~q 118 (348)
T PF03214_consen 74 LIPFKGDACRNFGYL---VSKKDYIVSIDDDCLPAKDDFGTHIDAVAQ 118 (348)
T ss_pred cccccccchhhhHhh---hcccceEEEEccccccccCCccceehhhhc
Confidence 1122333 3555665 578899999999999987766555555544
|
It is found associated with the cell wall, with the highest concentrations in the plasmodesmata. It is also located in the Golgi apparatus.; GO: 0008466 glycogenin glucosyltransferase activity, 0016758 transferase activity, transferring hexosyl groups, 0007047 cellular cell wall organization, 0030244 cellulose biosynthetic process, 0005618 cell wall, 0030054 cell junction |
| >PF05045 RgpF: Rhamnan synthesis protein F; InterPro: IPR007739 This family consists of a group of proteins which are related to the Streptococcal rhamnose-glucose polysaccharide assembly protein (RgpF) | Back alignment and domain information |
|---|
Probab=87.67 E-value=19 Score=38.57 Aligned_cols=173 Identities=16% Similarity=0.208 Sum_probs=90.1
Q ss_pred CCCeEEEEeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhh-CCCeEEEEeccCCCCCcc
Q 011596 219 FFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQE-AGANIVYRHRILRDGYKA 297 (482)
Q Consensus 219 ~~P~VsViIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~-~~v~vv~~~~~~~~g~Ka 297 (482)
..++|.|++=+|-.+ .+.+.+..+.+... .+.++|.-++.+. .+.+++...+.+. ..+.+... +|.|.-.
T Consensus 263 ~~~kiav~lHv~Y~D-Ll~E~l~~l~~~p~---~~Dl~ITt~~~~~--~~~i~~~l~~~~~~~~~~v~vv---~NrGRDi 333 (498)
T PF05045_consen 263 SKKKIAVHLHVFYPD-LLEEILDYLANIPF---PYDLFITTDSEEK--KEEIEEILAKRPGFKNAEVRVV---ENRGRDI 333 (498)
T ss_pred CCCcEEEEEEEEcHh-hHHHHHHHHHhCCC---CeEEEEECCchhh--HHHHHHHHHhccCCCceEEEEe---CCCCccH
Confidence 356899999998875 56666676665433 3456665443322 2334444433322 23444432 4555344
Q ss_pred ccHHHHhhhc-ccCCceEEEEEcCCCCCC--------------------hHHHHHHHHHhhcCCCeEEEeeeeeeecCC-
Q 011596 298 GNLKSAMNCS-YVKDYEFVAIFDADFQPN--------------------PDFLRRTVPHFKDNEELGLVQARWSFVNKD- 355 (482)
Q Consensus 298 ~aln~al~~~-~~a~~d~Vl~lDaD~~~~--------------------pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~- 355 (482)
+.+-.+++.. ...++|+|+.+.+--.+. ++.+.+++..|+++|++|+|.+...+....
T Consensus 334 ~pfLv~~~~~l~~~~YD~v~~~HtKKS~~~~~~~g~~wr~~l~~~LL~s~~~v~~Il~~F~~~p~lGlv~P~~~~~~~~~ 413 (498)
T PF05045_consen 334 LPFLVGLKDELLDSKYDYVCHLHTKKSPHNDRSDGDSWRRELLDNLLGSKEYVDNILSAFEDDPRLGLVIPDISHFRYPT 413 (498)
T ss_pred HHHHHHHHHHhccCCccEEEEEEcccCcCcCcchHHHHHHHHHHHhcCCHHHHHHHHHHHhhCCCceEEeCCcccccccc
Confidence 4443223221 136899999986643332 345667788888899999998875222111
Q ss_pred --CChHHHHHhhh-hhhhhhhhhhhccccccccccccceEeeeHHHHHHc
Q 011596 356 --ENLLTRLQDIN-LSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEDS 402 (482)
Q Consensus 356 --~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~i 402 (482)
..|......+. ..-......... ...+....|+++-+|.++++.+
T Consensus 414 ~~~~w~~N~~~~~~L~~rlg~~~~~~--~~~~~~p~GtMFW~R~~AL~~L 461 (498)
T PF05045_consen 414 IGDAWGENREIMKELAKRLGITKPID--DDTFFFPYGTMFWFRPEALRPL 461 (498)
T ss_pred ccccccccHHHHHHHHHHcCCCCCCc--cCCccccCccEEEeeHHHHHHH
Confidence 11211111111 110000000000 1112123599999999999886
|
Rhamnan backbones are found in several O-polysaccharides found in phytopathogenic bacteria and are regarded as pathogenic factors []. |
| >PRK13385 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=85.55 E-value=5.8 Score=37.54 Aligned_cols=99 Identities=10% Similarity=0.129 Sum_probs=55.3
Q ss_pred CchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHhhhcccC
Q 011596 231 NEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVK 310 (482)
Q Consensus 231 ne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al~~~~~a 310 (482)
+....+..+++.+.+...-+ ++ ++|+++...+...+.+ .++.....++... ..+.+ ....+..|++. ..
T Consensus 28 ~gkpll~~~i~~~~~~~~~~-~i-vVv~~~~~~~~~~~~~----~~~~~~~~~~~~v--~~g~~-r~~sv~~gl~~--~~ 96 (230)
T PRK13385 28 VGEPIFIHALRPFLADNRCS-KI-IIVTQAQERKHVQDLM----KQLNVADQRVEVV--KGGTE-RQESVAAGLDR--IG 96 (230)
T ss_pred CCeEHHHHHHHHHHcCCCCC-EE-EEEeChhhHHHHHHHH----HhcCcCCCceEEc--CCCch-HHHHHHHHHHh--cc
Confidence 45678888999887643222 33 3445432222222222 2221110011111 12222 34667777774 23
Q ss_pred CceEEEEEcCCC-CCChHHHHHHHHHhhcCC
Q 011596 311 DYEFVAIFDADF-QPNPDFLRRTVPHFKDNE 340 (482)
Q Consensus 311 ~~d~Vl~lDaD~-~~~pd~L~~lv~~f~~~p 340 (482)
+.+++++.|+|. .++++.+++++..+..++
T Consensus 97 ~~d~vli~~~d~P~i~~~~i~~li~~~~~~~ 127 (230)
T PRK13385 97 NEDVILVHDGARPFLTQDIIDRLLEGVAKYG 127 (230)
T ss_pred CCCeEEEccCCCCCCCHHHHHHHHHHHhhCC
Confidence 468999999998 669999999999987543
|
|
| >cd06422 NTP_transferase_like_1 NTP_transferase_like_1 is a member of the nucleotidyl transferase family | Back alignment and domain information |
|---|
Probab=85.44 E-value=8.3 Score=36.03 Aligned_cols=96 Identities=13% Similarity=0.140 Sum_probs=57.9
Q ss_pred EeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEecc-CCCCCccccHHHHh
Q 011596 226 QIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRI-LRDGYKAGNLKSAM 304 (482)
Q Consensus 226 iIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~-~~~g~Ka~aln~al 304 (482)
++|..+. ..+...+.++.+..... |+|+-+...+...+.+.. ...++++.+.... ...| -++++..++
T Consensus 24 llpi~g~-~li~~~l~~l~~~gi~~----i~iv~~~~~~~i~~~~~~-----~~~~~~i~~~~~~~~~~g-~~~~l~~~~ 92 (221)
T cd06422 24 LVPVAGK-PLIDHALDRLAAAGIRR----IVVNTHHLADQIEAHLGD-----SRFGLRITISDEPDELLE-TGGGIKKAL 92 (221)
T ss_pred eeeECCE-EHHHHHHHHHHHCCCCE----EEEEccCCHHHHHHHHhc-----ccCCceEEEecCCCcccc-cHHHHHHHH
Confidence 3444555 89999999999876533 444444444444433321 1245666665433 2333 667788887
Q ss_pred hhcccCCceEEEEEcCCCCCChHHHHHHHHH
Q 011596 305 NCSYVKDYEFVAIFDADFQPNPDFLRRTVPH 335 (482)
Q Consensus 305 ~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~ 335 (482)
... +.+.++++++|...+.+....+..+
T Consensus 93 ~~~---~~~~~lv~~~D~i~~~~~~~~~~~~ 120 (221)
T cd06422 93 PLL---GDEPFLVVNGDILWDGDLAPLLLLH 120 (221)
T ss_pred Hhc---CCCCEEEEeCCeeeCCCHHHHHHHH
Confidence 742 3378999999999888766544433
|
This is a subfamily of nucleotidyl transferases. Nucleotidyl transferases transfer nucleotides onto phosphosugars. The activated sugars are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides. Other subfamilies of nucleotidyl transferases include Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase. |
| >PRK13368 3-deoxy-manno-octulosonate cytidylyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=85.17 E-value=11 Score=35.78 Aligned_cols=92 Identities=13% Similarity=0.092 Sum_probs=55.0
Q ss_pred chHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHhhhcccCC
Q 011596 232 EKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKD 311 (482)
Q Consensus 232 e~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al~~~~~a~ 311 (482)
....++.+++.+.+...- ++ |+|+-+ ++...+.++ +.++++++..... .++.+ .+..++.. .+
T Consensus 26 GkPli~~~i~~l~~~~~~-~~--ivv~t~--~~~i~~~~~-------~~~~~v~~~~~~~-~~g~~-~~~~a~~~---~~ 88 (238)
T PRK13368 26 GKPMIQHVYERAAQAAGV-EE--VYVATD--DQRIEDAVE-------AFGGKVVMTSDDH-LSGTD-RLAEVMLK---IE 88 (238)
T ss_pred CcCHHHHHHHHHHhcCCC-Ce--EEEECC--hHHHHHHHH-------HcCCeEEecCccC-CCccH-HHHHHHHh---CC
Confidence 456788888888875221 23 334332 233333332 3456665543222 23233 35556552 35
Q ss_pred ceEEEEEcCCC-CCChHHHHHHHHHhhcCC
Q 011596 312 YEFVAIFDADF-QPNPDFLRRTVPHFKDNE 340 (482)
Q Consensus 312 ~d~Vl~lDaD~-~~~pd~L~~lv~~f~~~p 340 (482)
.|.++++++|. .+.++.+.+++..+..++
T Consensus 89 ~d~~lv~~~D~P~i~~~~i~~l~~~~~~~~ 118 (238)
T PRK13368 89 ADIYINVQGDEPMIRPRDIDTLIQPMLDDP 118 (238)
T ss_pred CCEEEEEcCCcCcCCHHHHHHHHHHHHHCC
Confidence 68999999998 678999999999886544
|
|
| >PLN03133 beta-1,3-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=85.16 E-value=34 Score=37.57 Aligned_cols=193 Identities=10% Similarity=0.049 Sum_probs=97.9
Q ss_pred CeEEEEeecCCch----HHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCc
Q 011596 221 PMVLVQIPMCNEK----EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYK 296 (482)
Q Consensus 221 P~VsViIP~yne~----~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~K 296 (482)
+.+-|+|.+.-.. +.|++|-..-.... ...-..++++--+.++.+...++++.+.|.+- +..-+...-.+.-.|
T Consensus 385 ~~LlI~V~Sap~nf~rR~AIR~TWg~~~~~~-~~~v~~rFvVG~s~n~~l~~~L~~Ea~~ygDI-Iq~dF~DsY~NLTlK 462 (636)
T PLN03133 385 LDLFIGVFSTANNFKRRMAVRRTWMQYDAVR-SGAVAVRFFVGLHKNQMVNEELWNEARTYGDI-QLMPFVDYYSLITWK 462 (636)
T ss_pred eEEEEEEeCCcccHHHHHHHHHhhccccccC-CCceEEEEEEecCCcHHHHHHHHHHHHHcCCe-EEEeeechhhhhHHH
Confidence 3456666555332 56666665421111 11112234443345566666676666655431 111222211222223
Q ss_pred ccc-HHHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeee-----cCCCChHHHHHhhhhhhh
Q 011596 297 AGN-LKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFV-----NKDENLLTRLQDINLSFH 370 (482)
Q Consensus 297 a~a-ln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~-----n~~~~~~~~~~~~~~~~~ 370 (482)
.-. +..+.. ..+.+||+-.|+|+.+..+-|.+.+.... +.-++..|..... +....|+-
T Consensus 463 tl~~~~wa~~---c~~akFilK~DDDvFVnv~~Ll~~L~~~~--~~~~Ly~G~v~~~~~PiRd~~sKWYV---------- 527 (636)
T PLN03133 463 TLAICIFGTE---VVSAKYVMKTDDDAFVRVDEVLASLKRTN--VSHGLLYGLINSDSQPHRNPDSKWYI---------- 527 (636)
T ss_pred HHHHHHHHHh---CCCceEEEEcCCceEEcHHHHHHHHHhcC--CCCceEEEEeccCCCcccCCCCCCCC----------
Confidence 321 223333 35789999999999998877766664332 2223444543221 11111110
Q ss_pred hhhhhhhccccccccccccceEeeeHHHHHHcC-----CCCCCCchhHHHHHHHHHH---CCCcEEEeccc
Q 011596 371 FEVEQQVNGVFINFFGFNGTAGVWRIKALEDSG-----GWMERTTVEDMDIAVRAHL---RGWKFIFLNDV 433 (482)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~iG-----gf~~~~~~ED~~l~~rl~~---~G~ki~~~~~~ 433 (482)
............+ +.|.+.++.+++.+.+- ...+..-.||..++.-+.. .|.++.|..+.
T Consensus 528 -s~~eyp~~~YPpY--asG~gYVlS~Dla~~L~~~s~s~~l~~f~lEDVyvGi~l~~l~k~gl~v~~~~~~ 595 (636)
T PLN03133 528 -SPEEWPEETYPPW--AHGPGYVVSRDIAKEVYKRHKEGRLKMFKLEDVAMGIWIAEMKKEGLEVKYENDG 595 (636)
T ss_pred -CHHHCCCCCCCCC--CCcCEEEEcHHHHHHHHHhhhhcccCcCChhhHhHHHHHHHhcccCCCceeeCCC
Confidence 0001111111122 68999999999998862 1223344799999998753 47777666554
|
|
| >cd04181 NTP_transferase NTP_transferases catalyze the transfer of nucleotides onto phosphosugars | Back alignment and domain information |
|---|
Probab=84.44 E-value=9.4 Score=35.25 Aligned_cols=94 Identities=16% Similarity=0.179 Sum_probs=54.5
Q ss_pred CCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHhhhccc
Q 011596 230 CNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYV 309 (482)
Q Consensus 230 yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al~~~~~ 309 (482)
.| ...+..+++++.+.... ++ ++++.. ..+...+.+. .....+..+.+.......| .++++..++..
T Consensus 27 ~g-~pli~~~l~~l~~~g~~--~i-~vv~~~-~~~~i~~~~~----~~~~~~~~i~~~~~~~~~g-~~~al~~~~~~--- 93 (217)
T cd04181 27 AG-KPILEYIIERLARAGID--EI-ILVVGY-LGEQIEEYFG----DGSKFGVNIEYVVQEEPLG-TAGAVRNAEDF--- 93 (217)
T ss_pred CC-eeHHHHHHHHHHHCCCC--EE-EEEecc-CHHHHHHHHc----ChhhcCceEEEEeCCCCCc-cHHHHHHhhhh---
Confidence 44 47889999998886532 33 334433 3333333222 1111345555543333333 67778777774
Q ss_pred CCceEEEEEcCCCCCChHHHHHHHHHhh
Q 011596 310 KDYEFVAIFDADFQPNPDFLRRTVPHFK 337 (482)
Q Consensus 310 a~~d~Vl~lDaD~~~~pd~L~~lv~~f~ 337 (482)
...+.++++++|...+.+. .+++..+.
T Consensus 94 ~~~~~~lv~~~D~~~~~~~-~~~~~~~~ 120 (217)
T cd04181 94 LGDDDFLVVNGDVLTDLDL-SELLRFHR 120 (217)
T ss_pred cCCCCEEEEECCeecCcCH-HHHHHHHH
Confidence 2578899999999887774 44555444
|
Nucleotidyltransferases transfer nucleotides onto phosphosugars. The enzyme family includes Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase. The products are activated sugars that are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides. |
| >PRK14353 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=84.16 E-value=11 Score=39.59 Aligned_cols=103 Identities=15% Similarity=0.156 Sum_probs=57.5
Q ss_pred EeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHhh
Q 011596 226 QIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMN 305 (482)
Q Consensus 226 iIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al~ 305 (482)
++|..+ ...++.+++.+.+.... ++ +|+-....+...+.+. ..+..+.+.......| .++++..+++
T Consensus 27 ll~v~g-kpli~~~l~~l~~~gi~--~i--vvv~~~~~~~i~~~~~-------~~~~~~~~~~~~~~~G-~~~sl~~a~~ 93 (446)
T PRK14353 27 LHPVAG-RPMLAHVLAAAASLGPS--RV--AVVVGPGAEAVAAAAA-------KIAPDAEIFVQKERLG-TAHAVLAARE 93 (446)
T ss_pred cCEECC-chHHHHHHHHHHhCCCC--cE--EEEECCCHHHHHHHhh-------ccCCCceEEEcCCCCC-cHHHHHHHHH
Confidence 344445 47899999998876532 33 3333333333333222 1122222222223333 5666766765
Q ss_pred hcccCCceEEEEEcCCC-CCChHHHHHHHHHhhcCCCe
Q 011596 306 CSYVKDYEFVAIFDADF-QPNPDFLRRTVPHFKDNEEL 342 (482)
Q Consensus 306 ~~~~a~~d~Vl~lDaD~-~~~pd~L~~lv~~f~~~p~v 342 (482)
.. ....|.++++++|. .++++.+++++...+.+.+.
T Consensus 94 ~l-~~~~~~~lv~~~D~P~i~~~~l~~l~~~~~~~~~~ 130 (446)
T PRK14353 94 AL-AGGYGDVLVLYGDTPLITAETLARLRERLADGADV 130 (446)
T ss_pred HH-hccCCCEEEEeCCcccCCHHHHHHHHHhHhcCCcE
Confidence 32 11346788899998 78999999999876543333
|
|
| >KOG4179 consensus Lysyl hydrolase/glycosyltransferase family 25 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=83.83 E-value=1.7 Score=44.08 Aligned_cols=111 Identities=18% Similarity=0.108 Sum_probs=69.7
Q ss_pred CeEEEEeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccC------CCC
Q 011596 221 PMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRIL------RDG 294 (482)
Q Consensus 221 P~VsViIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~------~~g 294 (482)
|.|-+.+-.+|-...+.-.+..+-++|||..+.-|.+--|.+.|.+.++.++-.+...+....+.++.... ..|
T Consensus 3 ptvl~alL~rn~ah~lp~Flg~le~~Dypk~r~aiw~~~dh~~d~~ie~freWL~nv~~~y~~V~~e~~~e~~s~~d~~~ 82 (568)
T KOG4179|consen 3 PTVLCALLFRNFAHSLPLFLGELEEGDYPKIRPAIWIGVDHEHDHAIEYFREWLENVGDLYHRVKWEPFIEPKSYPDEHG 82 (568)
T ss_pred ceeehHHHHHHHHhhhhhccCChhccCCcccccceEEecCccccchHHHHHHHHHhcCCccceeEEEecCCccccCcccC
Confidence 44555555666666666666666789999988888887777777777777766554444444555543322 233
Q ss_pred Ccc--------------ccHHHHhhhcccCCceEEEEEcCCCCC-ChHHHHHHHHH
Q 011596 295 YKA--------------GNLKSAMNCSYVKDYEFVAIFDADFQP-NPDFLRRTVPH 335 (482)
Q Consensus 295 ~Ka--------------~aln~al~~~~~a~~d~Vl~lDaD~~~-~pd~L~~lv~~ 335 (482)
.|- .++|.|- ..-.|||+|.|.|+.+ .++.|.-++..
T Consensus 83 pk~W~~sr~q~lm~lKeea~~~~r----~~~adyilf~d~d~lLts~dTl~llm~l 134 (568)
T KOG4179|consen 83 PKHWPDSRFQHLMSLKEEALNWAR----SGWADYILFKDEDNLLTSGDTLPLLMNL 134 (568)
T ss_pred CccCchHHHHHHHHHHHHHHHHHH----hhhcceeEEeehhheeeCCchHhHHHhc
Confidence 222 2223222 2457999999999987 56777666543
|
|
| >cd02517 CMP-KDO-Synthetase CMP-KDO synthetase catalyzes the activation of KDO which is an essential component of the lipopolysaccharide | Back alignment and domain information |
|---|
Probab=83.59 E-value=15 Score=34.69 Aligned_cols=94 Identities=17% Similarity=0.182 Sum_probs=53.9
Q ss_pred CchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHhhhcccC
Q 011596 231 NEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVK 310 (482)
Q Consensus 231 ne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al~~~~~a 310 (482)
+....++.+++.+.+..-.+ + |+|+-+ .+... +... +.++.+++.......| .++ +..+++.. ..
T Consensus 24 ~gkpll~~~l~~l~~~~~i~-~--ivvv~~--~~~i~----~~~~---~~~~~~~~~~~~~~~g-t~~-~~~~~~~~-~~ 88 (239)
T cd02517 24 AGKPMIQHVYERAKKAKGLD-E--VVVATD--DERIA----DAVE---SFGGKVVMTSPDHPSG-TDR-IAEVAEKL-DA 88 (239)
T ss_pred CCcCHHHHHHHHHHhCCCCC-E--EEEECC--cHHHH----HHHH---HcCCEEEEcCcccCch-hHH-HHHHHHhc-CC
Confidence 34568888888887752112 3 333322 23332 2222 3456666543222223 333 44455421 11
Q ss_pred CceEEEEEcCCC-CCChHHHHHHHHHhhcC
Q 011596 311 DYEFVAIFDADF-QPNPDFLRRTVPHFKDN 339 (482)
Q Consensus 311 ~~d~Vl~lDaD~-~~~pd~L~~lv~~f~~~ 339 (482)
..|.++++++|. .++++.+.+++..+..+
T Consensus 89 ~~d~vlv~~gD~Pli~~~~l~~l~~~~~~~ 118 (239)
T cd02517 89 DDDIVVNVQGDEPLIPPEMIDQVVAALKDD 118 (239)
T ss_pred CCCEEEEecCCCCCCCHHHHHHHHHHHHhC
Confidence 248899999999 78999999999888654
|
CMP-KDO Synthetase: 3-Deoxy-D-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) catalyzes the conversion of CTP and 3-deoxy-D-manno-octulosonate into CMP-3-deoxy-D-manno-octulosonate (CMP-KDO) and pyrophosphate. KDO is an essential component of the lipopolysaccharide found in the outer surface of gram-negative eubacteria. It is also a constituent of the capsular polysaccharides of some gram-negative eubacteria. Its presence in the cell wall polysaccharides of green algae and plant were also discovered. However, they have not been found in yeast and animals. The absence of the enzyme in mammalian cells makes it an attractive target molecule for drug design. |
| >PRK05450 3-deoxy-manno-octulosonate cytidylyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=83.24 E-value=18 Score=34.30 Aligned_cols=94 Identities=13% Similarity=0.147 Sum_probs=53.7
Q ss_pred CchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHhhhcccC
Q 011596 231 NEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVK 310 (482)
Q Consensus 231 ne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al~~~~~a 310 (482)
+....+..+++.+.+.. -++ |+|+-+ .+...+.+ . ..++++++.......| ..+ +..++......
T Consensus 25 ~Gkpll~~~l~~l~~~~--i~~--ivvv~~--~~~i~~~~----~---~~~~~v~~~~~~~~~g-t~~-~~~~~~~~~~~ 89 (245)
T PRK05450 25 GGKPMIVRVYERASKAG--ADR--VVVATD--DERIADAV----E---AFGGEVVMTSPDHPSG-TDR-IAEAAAKLGLA 89 (245)
T ss_pred CCcCHHHHHHHHHHhcC--CCe--EEEECC--cHHHHHHH----H---HcCCEEEECCCcCCCc-hHH-HHHHHHhcCCC
Confidence 34568888888887753 223 334333 23333222 2 3456666543322222 322 33344321123
Q ss_pred CceEEEEEcCCC-CCChHHHHHHHHHhhcC
Q 011596 311 DYEFVAIFDADF-QPNPDFLRRTVPHFKDN 339 (482)
Q Consensus 311 ~~d~Vl~lDaD~-~~~pd~L~~lv~~f~~~ 339 (482)
+.+.++++++|. .++++.+.+++..+..+
T Consensus 90 ~~~~vlv~~~D~Pli~~~~l~~li~~~~~~ 119 (245)
T PRK05450 90 DDDIVVNVQGDEPLIPPEIIDQVAEPLANP 119 (245)
T ss_pred CCCEEEEecCCCCCCCHHHHHHHHHHHhcC
Confidence 468999999999 78999999999987643
|
|
| >PLN03153 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=82.92 E-value=3.8 Score=43.31 Aligned_cols=99 Identities=14% Similarity=0.062 Sum_probs=61.0
Q ss_pred cCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHHHHhhhhhhhhhhhhhhccccccccccc
Q 011596 309 VKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQQVNGVFINFFGFN 388 (482)
Q Consensus 309 ~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (482)
..+.+|++++|+|+.+..+-|.+.++.+.. .+--.++........ +.. +...+.+.
T Consensus 208 ~pd~kWfVf~DDDTyf~~~NLv~~Ls~YDp-tkp~YIGs~Se~~~q---------n~~--------------f~~~fA~G 263 (537)
T PLN03153 208 LPDVRWFVLGDDDTIFNADNLVAVLSKYDP-SEMVYVGGPSESHSA---------NSY--------------FSHNMAFG 263 (537)
T ss_pred CCCCCEEEEecCCccccHHHHHHHHhhcCC-CCCEEeccccccccc---------ccc--------------cccccccC
Confidence 467899999999999987777777777642 222233332211111 000 00112367
Q ss_pred cceEeeeHHHHHHcCCCC-------CCCchhHHHHHHHHHHCCCcEEEec
Q 011596 389 GTAGVWRIKALEDSGGWM-------ERTTVEDMDIAVRAHLRGWKFIFLN 431 (482)
Q Consensus 389 G~~~~~Rr~~l~~iGgf~-------~~~~~ED~~l~~rl~~~G~ki~~~~ 431 (482)
|+++++.+.+++.+.... +...++|..++.-+...|.+....+
T Consensus 264 GAG~~LSrPLae~L~~~~d~C~~rY~~~~~gD~rL~~CL~elGV~LT~~~ 313 (537)
T PLN03153 264 GGGIAISYPLAEALSRILDDCLDRYPKLYGSDDRLHACITELGVPLSREP 313 (537)
T ss_pred CceEEEcHHHHHHHHHHhhhhhhhcccCCCcHHHHHHHHHHcCCCceecC
Confidence 999999996666543221 1235688999999999887765544
|
|
| >cd06425 M1P_guanylylT_B_like_N N-terminal domain of the M1P-guanylyltransferase B-isoform like proteins | Back alignment and domain information |
|---|
Probab=82.86 E-value=8.9 Score=36.22 Aligned_cols=100 Identities=18% Similarity=0.260 Sum_probs=56.7
Q ss_pred eecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhh-hCCCeEEEEeccCCCCCccccHHHHhh
Q 011596 227 IPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQ-EAGANIVYRHRILRDGYKAGNLKSAMN 305 (482)
Q Consensus 227 IP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~-~~~v~vv~~~~~~~~g~Ka~aln~al~ 305 (482)
+|..+. ..+..+++++.++... ++ ++|+. ...+...+.+. .++ ..++.+++.......| -++++..+..
T Consensus 26 lpv~g~-pli~~~l~~l~~~g~~--~v-~iv~~-~~~~~~~~~l~----~~~~~~~~~i~~~~~~~~~G-~~~al~~a~~ 95 (233)
T cd06425 26 VEFCNK-PMIEHQIEALAKAGVK--EI-ILAVN-YRPEDMVPFLK----EYEKKLGIKITFSIETEPLG-TAGPLALARD 95 (233)
T ss_pred CeECCc-chHHHHHHHHHHCCCc--EE-EEEee-eCHHHHHHHHh----cccccCCeEEEeccCCCCCc-cHHHHHHHHH
Confidence 455554 7899999999887543 33 33333 33333333333 221 3456666543333333 6677777776
Q ss_pred hcccCCceEEEEEcCCCCCChHHHHHHHHHhhc
Q 011596 306 CSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKD 338 (482)
Q Consensus 306 ~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~ 338 (482)
.....+.+ ++++.+|...+.+ +.+++..+..
T Consensus 96 ~~~~~~~~-~lv~~~D~~~~~~-~~~~~~~~~~ 126 (233)
T cd06425 96 LLGDDDEP-FFVLNSDVICDFP-LAELLDFHKK 126 (233)
T ss_pred HhccCCCC-EEEEeCCEeeCCC-HHHHHHHHHH
Confidence 42111245 5677999887766 4777776654
|
GDP-mannose pyrophosphorylase (GTP: alpha-d-mannose-1-phosphate guanyltransferase) catalyzes the formation of GDP-d-mannose from GTP and alpha-d-mannose-1-Phosphate. It contains an N-terminal catalytic domain and a C-terminal Lefthanded-beta-Helix fold domain. GDP-d-mannose is the activated form of mannose for formation of cell wall lipoarabinomannan and various mannose-containing glycolipids and polysaccharides. The function of GDP-mannose pyrophosphorylase is essential for cell wall integrity, morphogenesis and viability. Repression of GDP-mannose pyrophosphorylase in yeast leads to phenotypes, such as cell lysis, defective cell wall, and failure of polarized growth and cell separation. |
| >PRK00317 mobA molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed | Back alignment and domain information |
|---|
Probab=82.70 E-value=10 Score=34.65 Aligned_cols=90 Identities=14% Similarity=0.168 Sum_probs=53.8
Q ss_pred CchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHhhhcccC
Q 011596 231 NEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVK 310 (482)
Q Consensus 231 ne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al~~~~~a 310 (482)
+....++.+++.+. ... ++ |+|+-+.... . .. ..+++++........| ...++..|++ ..
T Consensus 28 ~g~~ll~~~i~~l~-~~~--~~--i~vv~~~~~~---~-~~-------~~~~~~v~~~~~~~~g-~~~~i~~~l~---~~ 87 (193)
T PRK00317 28 NGKPLIQHVIERLA-PQV--DE--IVINANRNLA---R-YA-------AFGLPVIPDSLADFPG-PLAGILAGLK---QA 87 (193)
T ss_pred CCEEHHHHHHHHHh-hhC--CE--EEEECCCChH---H-HH-------hcCCcEEeCCCCCCCC-CHHHHHHHHH---hc
Confidence 45678888888876 222 12 4444322211 1 11 2345544221111123 4567777887 35
Q ss_pred CceEEEEEcCCC-CCChHHHHHHHHHhhcCC
Q 011596 311 DYEFVAIFDADF-QPNPDFLRRTVPHFKDNE 340 (482)
Q Consensus 311 ~~d~Vl~lDaD~-~~~pd~L~~lv~~f~~~p 340 (482)
+.|+++++++|. .++++.+++++..+.+++
T Consensus 88 ~~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~ 118 (193)
T PRK00317 88 RTEWVLVVPCDTPFIPPDLVARLAQAAGKDD 118 (193)
T ss_pred CCCeEEEEcCCcCCCCHHHHHHHHHhhhcCC
Confidence 679999999999 669999999999875433
|
|
| >cd06915 NTP_transferase_WcbM_like WcbM_like is a subfamily of nucleotidyl transferases | Back alignment and domain information |
|---|
Probab=82.40 E-value=18 Score=33.52 Aligned_cols=93 Identities=12% Similarity=0.114 Sum_probs=53.8
Q ss_pred hHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHhhhcccCCc
Q 011596 233 KEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKDY 312 (482)
Q Consensus 233 ~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al~~~~~a~~ 312 (482)
...+..+++.+.+.... + |+|+-+..++...+.+.+. ...++.+.+.......| .++++..+++. ...
T Consensus 29 ~pli~~~l~~l~~~g~~--~--v~vv~~~~~~~i~~~~~~~----~~~~~~~~~~~~~~~~G-~~~~l~~a~~~---~~~ 96 (223)
T cd06915 29 RPFLEYLLEYLARQGIS--R--IVLSVGYLAEQIEEYFGDG----YRGGIRIYYVIEPEPLG-TGGAIKNALPK---LPE 96 (223)
T ss_pred cchHHHHHHHHHHCCCC--E--EEEEcccCHHHHHHHHcCc----cccCceEEEEECCCCCc-chHHHHHHHhh---cCC
Confidence 46788888888876432 3 3444443334433333210 01244544443333344 66777778774 245
Q ss_pred eEEEEEcCCCCCChHHHHHHHHHhhc
Q 011596 313 EFVAIFDADFQPNPDFLRRTVPHFKD 338 (482)
Q Consensus 313 d~Vl~lDaD~~~~pd~L~~lv~~f~~ 338 (482)
+.++++++|...+++ +.+++..+.+
T Consensus 97 ~~~lv~~~D~~~~~~-~~~~l~~~~~ 121 (223)
T cd06915 97 DQFLVLNGDTYFDVD-LLALLAALRA 121 (223)
T ss_pred CCEEEEECCcccCCC-HHHHHHHHHh
Confidence 789999999977655 6677776653
|
WcbM protein of Burkholderia mallei is involved in the biosynthesis, export or translocation of capsule. It is a subfamily of nucleotidyl transferases that transfer nucleotides onto phosphosugars. |
| >KOG1022 consensus Acetylglucosaminyltransferase EXT2/exostosin 2 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures] | Back alignment and domain information |
|---|
Probab=82.22 E-value=12 Score=39.59 Aligned_cols=119 Identities=14% Similarity=0.148 Sum_probs=72.2
Q ss_pred CCCeEEEEeecCCchHHHHHHHHHHHhCCCCCC-ceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCcc
Q 011596 219 FFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKS-KILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKA 297 (482)
Q Consensus 219 ~~P~VsViIP~yne~~~l~~tL~Sll~q~yp~~-~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka 297 (482)
.....+.++-+||.-+.|...+....+. |.- ++.|+-.+-+..+.- +..+. ...+.+.++.. |.
T Consensus 441 ~~qgFTlim~TYdR~d~L~k~v~~ys~v--PsL~kIlVVWNnq~k~PP~-es~~~------~~~VPlr~r~q------ke 505 (691)
T KOG1022|consen 441 HSQGFTLIMLTYDRVDLLKKLVKHYSRV--PSLKKILVVWNNQGKNPPP-ESLEP------DIAVPLRFRQQ------KE 505 (691)
T ss_pred cccceeeeeehHHHHHHHHHHHHHHhhC--CCcceEEEEecCCCCCCCh-hhccc------cCCccEEEEeh------hh
Confidence 4567999999999888888888876553 442 443333332222211 11111 23355444422 33
Q ss_pred ccHHHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeec
Q 011596 298 GNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVN 353 (482)
Q Consensus 298 ~aln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n 353 (482)
..||.=++-.-.-+.+-|+-+|+|.+++-|.|.--.....+.|+ -+|+...++..
T Consensus 506 NsLnNRF~~~peieT~AVL~IDDDIim~~ddldFgf~VWrefPD-~lVGF~pR~H~ 560 (691)
T KOG1022|consen 506 NSLNNRFEPYPEIETEAVLEIDDDIIMPCDDLDFGFEVWREFPD-RLVGFVPRFHV 560 (691)
T ss_pred hhhhcccccCcccccceeEEecCceeeecchhHHHHHHHHhCcc-ceeccCcceee
Confidence 33454444222456889999999999999999888888888787 45555544443
|
|
| >TIGR01173 glmU UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase | Back alignment and domain information |
|---|
Probab=82.13 E-value=12 Score=39.12 Aligned_cols=103 Identities=17% Similarity=0.209 Sum_probs=60.9
Q ss_pred EeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHhh
Q 011596 226 QIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMN 305 (482)
Q Consensus 226 iIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al~ 305 (482)
++|..+ ...+..+++++.+.... ++ +|+-....+...+.+. +.++.++. .....| .+.++..++.
T Consensus 22 l~~i~g-kpli~~~l~~l~~~g~~--~i--iiv~~~~~~~i~~~~~-------~~~i~~~~--~~~~~G-~~~ai~~a~~ 86 (451)
T TIGR01173 22 LHPLAG-KPMLEHVIDAARALGPQ--KI--HVVYGHGAEQVRKALA-------NRDVNWVL--QAEQLG-TGHAVLQALP 86 (451)
T ss_pred hceeCC-ccHHHHHHHHHHhCCCC--eE--EEEECCCHHHHHHHhc-------CCCcEEEE--cCCCCc-hHHHHHHHHH
Confidence 344444 47888899988876542 33 3333323333333222 23455432 222333 6667777776
Q ss_pred hcccCCceEEEEEcCCC-CCChHHHHHHHHHhhcCCCeEEEe
Q 011596 306 CSYVKDYEFVAIFDADF-QPNPDFLRRTVPHFKDNEELGLVQ 346 (482)
Q Consensus 306 ~~~~a~~d~Vl~lDaD~-~~~pd~L~~lv~~f~~~p~v~~V~ 346 (482)
. ..+.|.++++++|. .++++.+++++..+.+ ....++.
T Consensus 87 ~--l~~~~~~lv~~~D~p~i~~~~~~~l~~~~~~-~~~~~~~ 125 (451)
T TIGR01173 87 F--LPDDGDVLVLYGDVPLISAETLERLLEAHRQ-NGITLLT 125 (451)
T ss_pred h--cCCCCcEEEEECCcCCcCHHHHHHHHHHHhh-CCEEEEE
Confidence 4 23447899999998 6789999999988865 3444443
|
This protein is a bifunctional enzyme, GlmU, which catalyzes last two reactions in the four-step pathway of UDP-N-acetylglucosamine biosynthesis from fructose-6-phosphate. Its reaction product is required from peptidoglycan biosynthesis, LPS biosynthesis in species with LPS, and certain other processes. |
| >cd06428 M1P_guanylylT_A_like_N N-terminal domain of M1P_guanylyl_A_ like proteins are likely to be a isoform of GDP-mannose pyrophosphorylase | Back alignment and domain information |
|---|
Probab=81.28 E-value=13 Score=35.69 Aligned_cols=103 Identities=17% Similarity=0.201 Sum_probs=59.2
Q ss_pred EeecCCchHHHHHHHHHHHhC-CCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHh
Q 011596 226 QIPMCNEKEVYQQSIAAVCNL-DWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAM 304 (482)
Q Consensus 226 iIP~yne~~~l~~tL~Sll~q-~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al 304 (482)
.+|..+. ..|...|+++.+. ... + |+|+-....+...+.+.... ...++.+.+.......| -++++..+.
T Consensus 25 llpv~g~-plI~~~l~~l~~~~gi~--~--i~iv~~~~~~~i~~~l~~~~---~~~~~~i~~~~~~~~~G-t~~al~~a~ 95 (257)
T cd06428 25 LFPVAGK-PMIHHHIEACAKVPDLK--E--VLLIGFYPESVFSDFISDAQ---QEFNVPIRYLQEYKPLG-TAGGLYHFR 95 (257)
T ss_pred cCeECCe-eHHHHHHHHHHhcCCCc--E--EEEEecCCHHHHHHHHHhcc---cccCceEEEecCCccCC-cHHHHHHHH
Confidence 4566666 7889999998874 432 2 34444334444444333211 12355665544333344 566666665
Q ss_pred hhcccCCceEEEEEcCCCCCChHHHHHHHHHhhc
Q 011596 305 NCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKD 338 (482)
Q Consensus 305 ~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~ 338 (482)
........+.++++.+|...+.+ +..++.....
T Consensus 96 ~~l~~~~~~~~lv~~gD~~~~~d-l~~~~~~h~~ 128 (257)
T cd06428 96 DQILAGNPSAFFVLNADVCCDFP-LQELLEFHKK 128 (257)
T ss_pred HHhhccCCCCEEEEcCCeecCCC-HHHHHHHHHH
Confidence 53211234678889999987654 7788876654
|
N-terminal domain of the M1P-guanylyltransferase A-isoform like proteins: The proteins of this family are likely to be a isoform of GDP-mannose pyrophosphorylase. Their sequences are highly conserved with mannose-1-phosphate guanyltransferase, but generally about 40-60 bases longer. GDP-mannose pyrophosphorylase (GTP: alpha-d-mannose-1-phosphate guanyltransferase) catalyzes the formation of GDP-d-mannose from GTP and alpha-d-mannose-1-Phosphate. It contains an N-terminal catalytic domain that resembles a dinucleotide-binding Rossmann fold and a C-terminal LbH fold domain. GDP-d-mannose is the activated form of mannose for formation of cell wall lipoarabinomannan and various mannose-containing glycolipids and polysaccharides. The function of GDP-mannose pyrophosphorylase is essential for cell wall integrity, morphogenesis and viability. Repre |
| >TIGR03552 F420_cofC 2-phospho-L-lactate guanylyltransferase CofC | Back alignment and domain information |
|---|
Probab=80.88 E-value=20 Score=32.69 Aligned_cols=86 Identities=17% Similarity=0.165 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHhhhcccCCce
Q 011596 234 EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKDYE 313 (482)
Q Consensus 234 ~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al~~~~~a~~d 313 (482)
..+..+++.+..... ++ |+|+.+. +...+.+. ..++.++. .. .. +....+..|++.. ..+++
T Consensus 31 ~ll~~~l~~l~~~~~--~~--vvvv~~~--~~~~~~~~-------~~~v~~i~--~~-~~-G~~~si~~al~~~-~~~~~ 92 (195)
T TIGR03552 31 AMLRDVITALRGAGA--GA--VLVVSPD--PALLEAAR-------NLGAPVLR--DP-GP-GLNNALNAALAEA-REPGG 92 (195)
T ss_pred HHHHHHHHHHHhcCC--CC--EEEECCC--HHHHHHHH-------hcCCEEEe--cC-CC-CHHHHHHHHHHHh-hccCC
Confidence 356666666655432 23 4445442 22222221 34566542 22 22 3677777777742 23457
Q ss_pred EEEEEcCCC-CCChHHHHHHHHHhh
Q 011596 314 FVAIFDADF-QPNPDFLRRTVPHFK 337 (482)
Q Consensus 314 ~Vl~lDaD~-~~~pd~L~~lv~~f~ 337 (482)
.++++-+|+ .++++.+++++..++
T Consensus 93 ~vlv~~~D~P~l~~~~i~~l~~~~~ 117 (195)
T TIGR03552 93 AVLILMADLPLLTPRELKRLLAAAT 117 (195)
T ss_pred eEEEEeCCCCCCCHHHHHHHHHhcc
Confidence 999999998 569999999999886
|
Members of this protein family are the CofC enzyme of coenzyme F420 biosynthesis. |
| >cd02503 MobA MobA catalyzes the formation of molybdopterin guanine dinucleotide | Back alignment and domain information |
|---|
Probab=80.78 E-value=15 Score=33.04 Aligned_cols=85 Identities=12% Similarity=0.191 Sum_probs=53.5
Q ss_pred CchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHhhhcccC
Q 011596 231 NEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVK 310 (482)
Q Consensus 231 ne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al~~~~~a 310 (482)
+....++.+++.+... . ++ |+|+-+..... .. ..+++++.- +....|...++..|++. .
T Consensus 24 ~g~~ll~~~i~~l~~~-~--~~--iivv~~~~~~~----~~-------~~~~~~v~~--~~~~~G~~~si~~~l~~---~ 82 (181)
T cd02503 24 GGKPLLEHVLERLKPL-V--DE--VVISANRDQER----YA-------LLGVPVIPD--EPPGKGPLAGILAALRA---A 82 (181)
T ss_pred CCEEHHHHHHHHHHhh-c--CE--EEEECCCChHH----Hh-------hcCCcEeeC--CCCCCCCHHHHHHHHHh---c
Confidence 3456777888877654 2 23 44443322222 11 335555432 22222366788888883 4
Q ss_pred CceEEEEEcCCC-CCChHHHHHHHHHh
Q 011596 311 DYEFVAIFDADF-QPNPDFLRRTVPHF 336 (482)
Q Consensus 311 ~~d~Vl~lDaD~-~~~pd~L~~lv~~f 336 (482)
+.|.++++.+|. .++++.++.++..+
T Consensus 83 ~~~~vlv~~~D~P~i~~~~i~~l~~~~ 109 (181)
T cd02503 83 PADWVLVLACDMPFLPPELLERLLAAA 109 (181)
T ss_pred CCCeEEEEeCCcCCCCHHHHHHHHHhh
Confidence 579999999999 56999999999887
|
The prokaryotic enzyme molybdopterin-guanine dinucleotide biosynthesis protein A (MobA). All mononuclear molybdoenzymes bind molybdenum in complex with an organic cofactor termed molybdopterin (MPT). In many bacteria, including Escherichia coli, molybdopterin can be further modified by attachment of a GMP group to the terminal phosphate of molybdopterin to form molybdopterin guanine dinucleotide (MGD). This GMP attachment step is catalyzed by MobA, by linking a guanosine 5'-phosphate to MPT forming molybdopterin guanine dinucleotide. This reaction requires GTP, MgCl2, and the MPT form of the cofactor. It is a reaction unique to prokaryotes, and therefore may represent a potential drug target. |
| >cd02513 CMP-NeuAc_Synthase CMP-NeuAc_Synthase activates N-acetylneuraminic acid by adding CMP moiety | Back alignment and domain information |
|---|
Probab=80.74 E-value=19 Score=33.42 Aligned_cols=97 Identities=11% Similarity=0.172 Sum_probs=54.5
Q ss_pred CchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEecc---CCCCCccccHHHHhhhc
Q 011596 231 NEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRI---LRDGYKAGNLKSAMNCS 307 (482)
Q Consensus 231 ne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~---~~~g~Ka~aln~al~~~ 307 (482)
+....+..+++.+.+..... + |+|+-| ++...+.++ ..++.+.+...+ ....+....+..+++..
T Consensus 24 ~Gkpll~~~l~~l~~~~~~~-~--IvV~~~--~~~i~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l 91 (223)
T cd02513 24 GGKPLIAWTIEAALESKLFD-R--VVVSTD--DEEIAEVAR-------KYGAEVPFLRPAELATDTASSIDVILHALDQL 91 (223)
T ss_pred CCccHHHHHHHHHHhCCCCC-E--EEEECC--cHHHHHHHH-------HhCCCceeeCChHHCCCCCCcHHHHHHHHHHH
Confidence 44567888888888654322 2 444432 233333222 233422222111 11113455666677632
Q ss_pred cc--CCceEEEEEcCCC-CCChHHHHHHHHHhhcC
Q 011596 308 YV--KDYEFVAIFDADF-QPNPDFLRRTVPHFKDN 339 (482)
Q Consensus 308 ~~--a~~d~Vl~lDaD~-~~~pd~L~~lv~~f~~~ 339 (482)
.. .+.|+++++++|. .++++.+++++..+..+
T Consensus 92 ~~~~~~~d~vlv~~~D~P~i~~~~i~~~i~~~~~~ 126 (223)
T cd02513 92 EELGRDFDIVVLLQPTSPLRSAEDIDEAIELLLSE 126 (223)
T ss_pred HHhCCCCCEEEEeCCCCCcCCHHHHHHHHHHHHhC
Confidence 11 1358999999999 56999999999988753
|
CMP-N-acetylneuraminic acid synthetase (CMP-NeuAc synthetase) or acylneuraminate cytidylyltransferase catalyzes the transfer the CMP moiety of CTP to the anomeric hydroxyl group of NeuAc in the presence of Mg++. It is the second to last step in the sialylation of the oligosaccharide component of glycoconjugates by providing the activated sugar-nucleotide cytidine 5'-monophosphate N-acetylneuraminic acid (CMP-Neu5Ac), the substrate for sialyltransferases. Eukaryotic CMP-NeuAc synthetases are predominantly located in the nucleus. The activated CMP-Neu5Ac diffuses from the nucleus into the cytoplasm. |
| >KOG2287 consensus Galactosyltransferases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=80.67 E-value=26 Score=35.69 Aligned_cols=199 Identities=13% Similarity=0.090 Sum_probs=101.2
Q ss_pred CeEEEEeecCCchHHHHHHHHHH-HhCCC-CCCceEEEE-EcCCC-CHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCc
Q 011596 221 PMVLVQIPMCNEKEVYQQSIAAV-CNLDW-PKSKILIQV-LDDSD-DPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYK 296 (482)
Q Consensus 221 P~VsViIP~yne~~~l~~tL~Sl-l~q~y-p~~~~~IiV-vDdss-dd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~K 296 (482)
|.+-++|.+.-+.-.-++.++.- .++.. .+.++.++. +--.+ .+.....+.++.+.|.+- +..-+...-.+--.|
T Consensus 95 ~~lLl~V~S~~~~farR~aiR~TW~~~~~v~~~~v~~~FLvG~~~~~~~~~~~l~~Ea~~ygDI-i~~df~Dty~nltlK 173 (349)
T KOG2287|consen 95 PELLLLVKSAPDNFARRNAIRKTWGNENNVRGGRVRVLFLVGLPSNEDKLNKLLADEARLYGDI-IQVDFEDTYFNLTLK 173 (349)
T ss_pred ceEEEEEecCCCCHHHHHHHHHHhcCccccCCCcEEEEEEecCCCcHHHHHHHHHHHHHHhCCE-EEEecccchhchHHH
Confidence 56777777776653333333221 11111 122233332 22223 333344555555544321 111222222222334
Q ss_pred ccc-HHHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeec-CCCChHHHHHhhhhhhhhhhh
Q 011596 297 AGN-LKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVN-KDENLLTRLQDINLSFHFEVE 374 (482)
Q Consensus 297 a~a-ln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n-~~~~~~~~~~~~~~~~~~~~~ 374 (482)
.-+ +..+-.. ..+.+||+-+|+|+.+.++-|.+.+..-. +|.-....|...... ...+--.+|.-- ..
T Consensus 174 tl~~l~w~~~~--cp~akfi~K~DDDvfv~~~~L~~~L~~~~-~~~~~~~~G~v~~~~~p~R~~~~KwyVp-------~~ 243 (349)
T KOG2287|consen 174 TLAILLWGVSK--CPDAKFILKIDDDVFVNPDNLLEYLDKLN-DPSSDLYYGRVIQNAPPIRDKTSKWYVP-------ES 243 (349)
T ss_pred HHHHHHHHHhc--CCcceEEEeccCceEEcHHHHHHHHhccC-CCCcceEEEeecccCCCCCCCCCCCccC-------HH
Confidence 322 2333321 35789999999999999988888777664 466667777643321 100111111000 00
Q ss_pred hhhccccccccccccceEeeeHHHHHHcC---CCCCCCchhHHHHHHHHHHC-CCcEEEecc
Q 011596 375 QQVNGVFINFFGFNGTAGVWRIKALEDSG---GWMERTTVEDMDIAVRAHLR-GWKFIFLND 432 (482)
Q Consensus 375 ~~~~~~~~~~~~~~G~~~~~Rr~~l~~iG---gf~~~~~~ED~~l~~rl~~~-G~ki~~~~~ 432 (482)
.........+ ++|.+.++.+++.+.+- +.....-.||..++.-+... |.+-...+.
T Consensus 244 ~y~~~~YP~Y--~sG~gYvis~~~a~~l~~~s~~~~~~~iEDV~~g~~l~~~~gi~~~~~~~ 303 (349)
T KOG2287|consen 244 EYPCSVYPPY--ASGPGYVISGDAARRLLKASKHLKFFPIEDVFVGGCLAEDLGIKPVNHPG 303 (349)
T ss_pred HCCCCCCCCc--CCCceeEecHHHHHHHHHHhcCCCccchHHHHHHHHHHHhcCCCcccCcc
Confidence 0001111111 68999999999888763 22222446999999999987 766655554
|
|
| >PRK14352 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=80.61 E-value=21 Score=37.97 Aligned_cols=102 Identities=11% Similarity=0.111 Sum_probs=58.3
Q ss_pred EeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHhh
Q 011596 226 QIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMN 305 (482)
Q Consensus 226 iIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al~ 305 (482)
++|..+.+ .++.+++++.+.... ++.| ++-. ..+...+.+. .....+.+.......| .++++..|++
T Consensus 26 llpi~gkp-li~~~l~~l~~~g~~--~iiv-vv~~-~~~~i~~~~~-------~~~~~~~~~~~~~~~G-t~~si~~al~ 92 (482)
T PRK14352 26 LHTLAGRS-MLGHVLHAAAGLAPQ--HLVV-VVGH-DRERVAPAVA-------ELAPEVDIAVQDEQPG-TGHAVQCALE 92 (482)
T ss_pred eceeCCcc-HHHHHHHHHHhcCCC--cEEE-EECC-CHHHHHHHhh-------ccCCccEEEeCCCCCC-cHHHHHHHHH
Confidence 44555544 899999998876532 3333 3332 2233333222 1111222222222333 5677877877
Q ss_pred hcccCCceEEEEEcCCC-CCChHHHHHHHHHhhcCC
Q 011596 306 CSYVKDYEFVAIFDADF-QPNPDFLRRTVPHFKDNE 340 (482)
Q Consensus 306 ~~~~a~~d~Vl~lDaD~-~~~pd~L~~lv~~f~~~p 340 (482)
.......+.++++++|. .++++.+++++..+..++
T Consensus 93 ~l~~~~~~~vlV~~gD~P~~~~~~l~~li~~~~~~~ 128 (482)
T PRK14352 93 ALPADFDGTVVVTAGDVPLLDGETLADLVATHTAEG 128 (482)
T ss_pred HhccCCCCeEEEEeCCeeccCHHHHHHHHHHHHhcC
Confidence 43111247899999998 678999999998876533
|
|
| >cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis | Back alignment and domain information |
|---|
Probab=80.04 E-value=34 Score=33.64 Aligned_cols=108 Identities=11% Similarity=0.077 Sum_probs=58.8
Q ss_pred eEEEEeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEecc---CCCCC---
Q 011596 222 MVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRI---LRDGY--- 295 (482)
Q Consensus 222 ~VsViIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~---~~~g~--- 295 (482)
+++|+....|-...+..++.|++.-. ...+.+.|++|+.+.+..+.+.+..+ ..+..+....-. ..-..
T Consensus 2 ~~~iv~~~~~y~~~~~~~i~Sil~n~--~~~~~fhii~d~~s~~~~~~l~~~~~---~~~~~i~f~~i~~~~~~~~~~~~ 76 (280)
T cd06431 2 HVAIVCAGYNASRDVVTLVKSVLFYR--RNPLHFHLITDEIARRILATLFQTWM---VPAVEVSFYNAEELKSRVSWIPN 76 (280)
T ss_pred EEEEEEccCCcHHHHHHHHHHHHHcC--CCCEEEEEEECCcCHHHHHHHHHhcc---ccCcEEEEEEhHHhhhhhccCcc
Confidence 47788888555688899999998743 33467777877655544343333322 334555544321 11000
Q ss_pred ccccHHHH-----hhhcccCCceEEEEEcCCCCCChHHHHHHHHH
Q 011596 296 KAGNLKSA-----MNCSYVKDYEFVAIFDADFQPNPDFLRRTVPH 335 (482)
Q Consensus 296 Ka~aln~a-----l~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~ 335 (482)
....-.++ +......+.|-|+.+|+|.++..| |.++...
T Consensus 77 ~~~s~~y~y~RL~ip~llp~~~dkvLYLD~Diiv~~d-i~eL~~~ 120 (280)
T cd06431 77 KHYSGIYGLMKLVLTEALPSDLEKVIVLDTDITFATD-IAELWKI 120 (280)
T ss_pred cchhhHHHHHHHHHHHhchhhcCEEEEEcCCEEEcCC-HHHHHHH
Confidence 00111111 111122368999999999988543 4444443
|
The catalytic domain of LARGE is a putative glycosyltransferase. Mutations of LARGE in mouse and human cause dystroglycanopathies, a disease associated with hypoglycosylation of the membrane protein alpha-dystroglycan (alpha-DG) and consequent loss of extracellular ligand binding. LARGE needs to both physically interact with alpha-dystroglycan and function as a glycosyltransferase in order to stimulate alpha-dystroglycan hyperglycosylation. LARGE localizes to the Golgi apparatus and contains three conserved DxD motifs. While two of the motifs are indispensible for glycosylation function, one is important for localization of th eenzyme. LARGE was originally named because it covers approximately large trunck of genomic DNA, more than 600bp long. The predicted protein structure contains an N-terminal cytoplasmic domain, a transmembrane region, a coiled-coil |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 482 | ||||
| 4hg6_A | 802 | Structure Of A Cellulose Synthase - Cellulose Trans | 1e-21 |
| >pdb|4HG6|A Chain A, Structure Of A Cellulose Synthase - Cellulose Translocation Intermediate Length = 802 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 482 | |||
| 2z86_A | 625 | Chondroitin synthase; GT-A, glycosyltransferase A, | 6e-08 | |
| 2z86_A | 625 | Chondroitin synthase; GT-A, glycosyltransferase A, | 8e-07 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-06 | |
| 3ckj_A | 329 | Putative uncharacterized protein; mycobacteria, un | 3e-05 | |
| 4fix_A | 657 | UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 | 2e-04 |
| >2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* Length = 625 | Back alignment and structure |
|---|
Score = 54.2 bits (130), Expect = 6e-08
Identities = 30/216 (13%), Positives = 74/216 (34%), Gaps = 22/216 (10%)
Query: 219 FFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQ 278
P+V + IP N + + + + N ++ I D S D T + L +
Sbjct: 373 RVPLVSIYIPAYNCSKYIVRCVESALNQTITDLEVCI-CDDGSTDDTLRIL-----QEHY 426
Query: 279 EAGANIVYRHRILRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKD 338
+ + + ++ +A+ ++ D+D PD + + F+
Sbjct: 427 ANHPRVRFISQ--KNKGIGSASNTAVRLC---RGFYIGQLDSDDFLEPDAVELCLDEFRK 481
Query: 339 NEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKA 398
+ L V ++++ NL++ + + + ++ +A
Sbjct: 482 DLSLACVYTTNRNIDREGNLISN-------GYNWPIYSREKLTSAMICHH--FRMFTARA 532
Query: 399 LEDSGGWMER-TTVEDMDIAVRAHLRGWKFIFLNDV 433
+ G+ E + D D+ ++ G F +N +
Sbjct: 533 WNLTEGFNESISNAVDYDMYLKLSEVG-PFKHINKI 567
|
| >2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* Length = 625 | Back alignment and structure |
|---|
Score = 50.7 bits (121), Expect = 8e-07
Identities = 44/283 (15%), Positives = 89/283 (31%), Gaps = 47/283 (16%)
Query: 221 PMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEA 280
+ + IP N ++ ++A +CN +I D S + EE+++ E+
Sbjct: 93 DGLSIVIPTYNRAKILAITLACLCNQKTIYDYEVIVADDGSKENI------EEIVREFES 146
Query: 281 GANIVYRHRILRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNE 340
NI Y + + + Y +VAI D D PNP +++ + ++
Sbjct: 147 LLNIKYVRQKDYGYQLCAVRNLGLRAA---KYNYVAILDCDMAPNPLWVQSYMELLAVDD 203
Query: 341 ELGLVQARWSFVNKDENLLTRLQDINL--------------------------SFHFEVE 374
+ L+ R L L +L HF+
Sbjct: 204 NVALIGPRKYIDTSKHTYLDFLSQKSLINEIPEIITNNQVAGKVEQNKSVDWRIEHFKNT 263
Query: 375 QQVNGVFINFFGFNGTAGVWRIKALEDSGGW---MERTTVEDMDIAVRAHLRGWKFIFLN 431
+ F F+G + K L +G + ED + R + G F
Sbjct: 264 DNLRLCNTPFRFFSGGNVAFAKKWLFRAGWFDEEFTHWGGEDNEFGYRLYREGCYFRS-- 321
Query: 432 DVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRAKVY 474
+ + +++ + + + +++ KV
Sbjct: 322 -------VEGAMAYHQEPPGKENETDRAAGKNITVQLLQQKVP 357
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 48.7 bits (115), Expect = 4e-06
Identities = 83/565 (14%), Positives = 160/565 (28%), Gaps = 204/565 (36%)
Query: 17 EDFLRA-------EHHTAAPANKTRNRNAKQLTWVLLLKAHKAAGCLTSIASAFFSLGSL 69
+D ++ +H + + +L W LL K + F +
Sbjct: 39 QDMPKSILSKEEIDHIIMSKDAVSGTL---RLFWTLLSKQ-------EEMVQKFV--EEV 86
Query: 70 VRRR----VAAGRTDQPPTSADTHEIQKLRTRFFYSCIKLFLWLSVVLFAFELCAYFKGW 125
+R ++ +T+Q S T + R R L+ +FA K
Sbjct: 87 LRINYKFLMSPIKTEQRQPSMMTRMYIEQRDR---------LYNDNQVFA-------K-- 128
Query: 126 HFAT---PNLQLQYIFQSPLAIKGAFDLLYSSWVLVRVH--------YLAPPLQFLANAC 174
+ + P L+L+ + +L + VL+ ++A + C
Sbjct: 129 YNVSRLQPYLKLR---------QALLELRPAKNVLI--DGVLGSGKTWVA------LDVC 171
Query: 175 IVLFLIQSLDRLILCL---GCFWIRFKRIKPVPKHDDTSDLESGQKGFFPMVLVQIPMCN 231
L + C FW+ K + + LE QK +L QI N
Sbjct: 172 --------LSYKVQCKMDFKIFWLNLKN-----CNSPETVLEMLQK-----LLYQI-DPN 212
Query: 232 EKEVYQQSIAAVCNLDWPKSKI------------LIQVLDD-SD-------DPTAQTLI- 270
S + ++++ L+ VL + + + + + L+
Sbjct: 213 WTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLL-VLLNVQNAKAWNAFNLSCKILLT 271
Query: 271 --KEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQ--P-- 324
++V + + H L + VK + D Q P
Sbjct: 272 TRFKQVT---DFLSAATTTHISLDH------HSMTLTPDEVKSL-LLKYLDCRPQDLPRE 321
Query: 325 ----NP-------DFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHFEV 373
NP + +R + + W VN D+ LT + + +L+
Sbjct: 322 VLTTNPRRLSIIAESIRDGLATWD----------NWKHVNCDK--LTTIIESSLNVLEPA 369
Query: 374 EQQVNGVFINFFGFNGTAGVWRI--KALEDSGGWMERTTVEDMDIAVRAH-----LRGWK 426
E + +F F I L W + + M + + H + K
Sbjct: 370 EYR--KMFDRLSVFP--PSAH-IPTILLSLI--WFDVIKSDVMVVVNKLHKYSLVEKQPK 422
Query: 427 --FIFLNDV----ECQCE--------LPESYEAYRKQQHR------------WHSG---- 456
I + + + + E + + Y + H G
Sbjct: 423 ESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLK 482
Query: 457 ------PMQLFRLCLPDI--IRAKV 473
M LFR+ D + K+
Sbjct: 483 NIEHPERMTLFRMVFLDFRFLEQKI 507
|
| >3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A Length = 329 | Back alignment and structure |
|---|
Score = 45.0 bits (106), Expect = 3e-05
Identities = 44/280 (15%), Positives = 86/280 (30%), Gaps = 51/280 (18%)
Query: 208 DTSDLESGQKGFFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQ 267
++LE+ + G + +V +P +E++ I ++ L LI + S D T
Sbjct: 37 TVAELEAAKAGR-TISVV-LPALDEEDTIGSVIDSISPLVDGLVDELIVLDSGSTDDTE- 93
Query: 268 TLIKEEVLKWQEAGANIVYRHRILRDGY----KAGNLKSAMNCSYVKDYEFVAIFDADFQ 323
AGA +V R + L + K L ++ S + V D+D
Sbjct: 94 -----IRAV--AAGARVVSREQALPEVPIRPGKGEALWRSLAAS---RGDIVVFVDSDLI 143
Query: 324 -PNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQQVNGVFI 382
P+P F+ V + + LV++ + + E +
Sbjct: 144 NPHPMFVPWLVGPLLTGDGVHLVKSFYRRPLNVGDAGGGAG--ATGGGRVTELVARPLLA 201
Query: 383 NFFG--------FNGTAGVWR--IKALEDSGGWMERTTVE-DMDIAVRAHLRGWKFIFLN 431
G R + ++ + G+ VE + + L
Sbjct: 202 ALRPELGCILQPLGGEYAATRELLTSVPFAPGY----GVEIGLLVDTFDRLGLDA----- 252
Query: 432 DVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRA 471
Q L R+ ++R + + R +I
Sbjct: 253 --IAQVNLG-----VREHRNRPLAELGAMSR----QVIAT 281
|
| >4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A* Length = 657 | Back alignment and structure |
|---|
Score = 42.7 bits (100), Expect = 2e-04
Identities = 29/250 (11%), Positives = 63/250 (25%), Gaps = 54/250 (21%)
Query: 221 PMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDD--SDDPTAQTLIKEEVLKWQ 278
+ V IP N ++ + I ++ D +
Sbjct: 180 ANIAVGIPTFNRPADCVNALRELTADPLVDQVIGAVIVPDQGERKVRDHPDFPAAAARLG 239
Query: 279 EAGANIVYRHRILRD---GYKAGN---LKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRT 332
R I G G + A+ + D + + D D + PD + R
Sbjct: 240 S-------RLSIHDQPNLGGSGGYSRVMYEALKNT---DCQQILFMDDDIRLEPDSILRV 289
Query: 333 VPHFKDNEELGLVQAR----------------------WSFVNKDENLLTRLQDINLSFH 370
+ + + LV + + L+ +
Sbjct: 290 LAMHRFAKAPMLVGGQMLNLQEPSHLHIMGEVVDRSIFMWTAAPHAEYDHDFAEYPLNDN 349
Query: 371 FEVEQQVNGVF-INFFGFNGTAGVWRIKALEDSGG------WMERTTVEDMDIAVRAHLR 423
+ ++ +++ G+ + E+ G +D D +RA
Sbjct: 350 NSRSKLLHRRIDVDYNGWWTCMI--PRQVAEELGQPLPLFIKW-----DDADYGLRAAEH 402
Query: 424 GWKFIFLNDV 433
G+ + L
Sbjct: 403 GYPTVTLPGA 412
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 482 | |||
| 4hg6_A | 802 | Cellulose synthase subunit A; membrane translocati | 100.0 | |
| 1xhb_A | 472 | Polypeptide N-acetylgalactosaminyltransferase 1; g | 99.94 | |
| 3bcv_A | 240 | Putative glycosyltransferase protein; protein stru | 99.93 | |
| 1qg8_A | 255 | Protein (spore coat polysaccharide biosynthesis P | 99.93 | |
| 2d7i_A | 570 | Polypeptide N-acetylgalactosaminyltransferase 10; | 99.92 | |
| 2z86_A | 625 | Chondroitin synthase; GT-A, glycosyltransferase A, | 99.91 | |
| 2ffu_A | 501 | Ppgalnact-2, polypeptide N-acetylgalactosaminyltra | 99.91 | |
| 2z86_A | 625 | Chondroitin synthase; GT-A, glycosyltransferase A, | 99.89 | |
| 4fix_A | 657 | UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 | 99.88 | |
| 3ckj_A | 329 | Putative uncharacterized protein; mycobacteria, un | 99.87 | |
| 3l7i_A | 729 | Teichoic acid biosynthesis protein F; GT-B fold, m | 99.82 | |
| 3f1y_A | 387 | Mannosyl-3-phosphoglycerate synthase; GT-A type gl | 99.81 | |
| 2nxv_A | 249 | ATP synthase subunits region ORF 6; majastridin, A | 99.76 | |
| 2fy7_A | 287 | Beta-1,4-galactosyltransferase 1; M339H mutant, AP | 99.75 | |
| 2bo4_A | 397 | Mannosylglycerate synthase; catalysis, glycosyltra | 99.6 | |
| 2wvl_A | 391 | Mannosyl-3-phosphoglycerate synthase; GT-A fold, t | 99.12 | |
| 1fo8_A | 343 | Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetyl | 98.91 | |
| 2zu9_A | 394 | Mannosyl-3-phosphoglycerate synthase; GT-A fold, g | 98.85 | |
| 3lw6_A | 287 | FI08434P, beta-4-galactosyltransferase 7; protein- | 97.41 | |
| 2c0n_A | 203 | A197; thermophil protein, thermophilic virus, STIV | 96.74 | |
| 3tqd_A | 256 | 3-deoxy-manno-octulosonate cytidylyltransferase; c | 95.94 | |
| 4fcu_A | 253 | 3-deoxy-manno-octulosonate cytidylyltransferase; s | 95.62 | |
| 1v84_A | 253 | Galactosylgalactosylxylosylprotein 3-beta- glucuro | 95.33 | |
| 3cu0_A | 281 | Galactosylgalactosylxylosylprotein 3-beta- glucuro | 95.3 | |
| 2d0j_A | 246 | Galactosylgalactosylxylosylprotein 3-beta- glucuro | 94.77 | |
| 3k8d_A | 264 | 3-deoxy-manno-octulosonate cytidylyltransferase; K | 94.0 | |
| 3oam_A | 252 | 3-deoxy-manno-octulosonate cytidylyltransferase; c | 93.48 | |
| 1omz_A | 293 | Alpha-1,4-N-acetylhexosaminyltransferase EXTL2; ro | 92.18 | |
| 1qwj_A | 229 | Cytidine monophospho-N-acetylneuraminic acid synth | 88.68 | |
| 2wee_A | 197 | MOBA-related protein; unknown function; 1.65A {Myc | 88.1 | |
| 2waw_A | 199 | MOBA relate protein; unknown function; HET: PGE; 1 | 88.08 | |
| 2y6p_A | 234 | 3-deoxy-manno-octulosonate cytidylyltransferase; l | 85.94 | |
| 3st8_A | 501 | Bifunctional protein GLMU; acetyltransferase, pyro | 82.34 | |
| 1vic_A | 262 | 3-deoxy-manno-octulosonate cytidylyltransferase; s | 80.37 | |
| 1h7e_A | 245 | 3-deoxy-manno-octulosonate cytidylyltransferase; n | 80.25 |
| >4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-37 Score=344.40 Aligned_cols=318 Identities=27% Similarity=0.382 Sum_probs=224.5
Q ss_pred chhhHhHHHHHHHHHHHHhhHhhccchHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccCCC
Q 011596 140 SPLAIKGAFDLLYSSWVLVRVHYLAPPLQ--FLANACIVLFLIQSLDRLILCLGCFWIRFKRIKPVPKHDDTSDLESGQK 217 (482)
Q Consensus 140 ~~~~~~~~~~~~y~~w~~~r~~~~~~~l~--~~~~~~~~lf~i~~~~~l~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~ 217 (482)
++..+..+...+|+.| |...+++... +...+.+.++++..+..+...++.+. ..++..+... .. ..+
T Consensus 68 ~~~~~~~~~~~~y~~w---r~~~tl~~~~~~~~~~~~~~ll~~~~~~~~~~l~~~~~----~~~~~~r~~~--~~--~~~ 136 (802)
T 4hg6_A 68 LLLSAASMLVMRYWFW---RLFETLPPPALDASFLFALLLFAVETFSISIFFLNGFL----SADPTDRPFP--RP--LQP 136 (802)
T ss_dssp HHHHHHHHHHHHHHHH---HHHHTSCCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHH----TTSCCCCCCC--CC--CCT
T ss_pred HHHHHHHHHHHHHHHH---HhheecCCccchHHHHHHHHHHHHHHHHHHHHHHHHHH----HhcccCCCCC--CC--CCc
Confidence 3556666777899999 5555555321 11122233333333333333333332 2222221111 01 122
Q ss_pred CCCCeEEEEeecCCchHH-HHHHHHHHHhCCCCCCceEEEEEcCCCCHHHH-----HH----------HHHHHHHhhhCC
Q 011596 218 GFFPMVLVQIPMCNEKEV-YQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQ-----TL----------IKEEVLKWQEAG 281 (482)
Q Consensus 218 ~~~P~VsViIP~yne~~~-l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~-----~~----------~~~~~~~~~~~~ 281 (482)
++.|+|||+||+|||++. +++|++|+++|+||+++++|+|+||+|+|.+. ++ +++..+ +.+
T Consensus 137 ~~~P~VSViIPtyNe~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~~d~~i~~~~~~~~~~l~~~~~---~~~ 213 (802)
T 4hg6_A 137 EELPTVDILVPSYNEPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMSPDPELAQKAQERRRELQQLCR---ELG 213 (802)
T ss_dssp TTCCCEEEEEECTTCCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTCSSHHHHHHHHHHHHHHHHHHH---HHT
T ss_pred cCCCcEEEEEEECCCCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCccccccCCHHHHHHHHhhhHHHHHHHH---hcC
Confidence 368999999999999954 59999999999999988999999999998883 22 222222 345
Q ss_pred CeEEEEeccCCCCCccccHHHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHH
Q 011596 282 ANIVYRHRILRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTR 361 (482)
Q Consensus 282 v~vv~~~~~~~~g~Ka~aln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~ 361 (482)
+.+ ..+++++++|++|+|.|++ .+++|||+++|+|+.++||+|++++..|+++|++++|++...+.+.+. ....
T Consensus 214 v~~--i~~~~~~~GKa~alN~gl~---~a~gd~Il~lDaD~~~~pd~L~~lv~~~~~dp~v~~V~~~~~~~~~~~-~~~~ 287 (802)
T 4hg6_A 214 VVY--STRERNEHAKAGNMSAALE---RLKGELVVVFDADHVPSRDFLARTVGYFVEDPDLFLVQTPHFFINPDP-IQRN 287 (802)
T ss_dssp CEE--EECSSCCSHHHHHHHHHHH---HCCCSEEEECCTTEEECTTHHHHHHHHHHHSSSCCEEECCCCBSSCCH-HHHH
T ss_pred cEE--EEecCCCCcchHHHHHHHH---hcCCCEEEEECCCCCcChHHHHHHHHHHhcCCCeEEEeccEEEeCCch-Hhhh
Confidence 554 4566676789999999999 689999999999999999999999999987899999999988777641 1111
Q ss_pred HHhh-----hhhhhhhhhhhhccccccccccccceEeeeHHHHHHcCCCCCCCchhHHHHHHHHHHCCCcEEEeccceec
Q 011596 362 LQDI-----NLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEDSGGWMERTTVEDMDIAVRAHLRGWKFIFLNDVECQ 436 (482)
Q Consensus 362 ~~~~-----~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~iGgf~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~ 436 (482)
.... .....+.......... +...++|+++++||++++++|||++..++||.+++.++.++||++.|+|++.++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~G~~~~~Rr~al~~vGgf~~~~~~ED~~l~~rl~~~G~ri~~~~~~~~~ 366 (802)
T 4hg6_A 288 LALGDRCPPENEMFYGKIHRGLDRW-GGAFFCGSAAVLRRRALDEAGGFAGETITEDAETALEIHSRGWKSLYIDRAMIA 366 (802)
T ss_dssp HTCCTTSCCTTHHHHHTHHHHHHHT-TCCCCCSSSEEEEHHHHHHHTTCCCSSSSHHHHHHHHHHTTTCCEEECCCCCEE
T ss_pred hhHHhhhhHHHHHHHHHHHhhHhhc-CCceecccchhhhHHHHHHcCCcCCCCcchHHHHHHHHHHcCCeEEEecCCEEE
Confidence 1100 0011111111111111 112268999999999999999999999999999999999999999999999999
Q ss_pred ccCCcCHHHHHHHHHhhhhhhHHHHHHhChhhhhcCcchhhcc
Q 011596 437 CELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRAKVYILSNT 479 (482)
Q Consensus 437 ~~~p~t~~~~~~qr~RW~~G~~q~~~~~~~~i~~s~~~~~~k~ 479 (482)
++.|+|+.++++||.||.+|.+|.++.+.+ +.++++++.+|+
T Consensus 367 ~~~p~t~~~~~~Qr~RW~~G~~q~l~~~~p-l~~~~l~~~~rl 408 (802)
T 4hg6_A 367 GLQPETFASFIQQRGRWATGMMQMLLLKNP-LFRRGLGIAQRL 408 (802)
T ss_dssp ECCCCSHHHHHHHHHHHHHHHHHHHHHSCT-TSCSSCCHHHHH
T ss_pred ecCCCCHHHHHHHHHHHHccHHHHHHHhCc-cccCCCCHHHHH
Confidence 999999999999999999999999988754 445566666554
|
| >1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17 | Back alignment and structure |
|---|
Probab=99.94 E-value=1.3e-26 Score=243.46 Aligned_cols=242 Identities=13% Similarity=0.160 Sum_probs=174.2
Q ss_pred CCCeEEEEeecCCch-HHHHHHHHHHHhCCCCCCceEEEEEcCCCCH-HHHHHHHHHHHHhhhCCCeEEEEeccCCCCCc
Q 011596 219 FFPMVLVQIPMCNEK-EVYQQSIAAVCNLDWPKSKILIQVLDDSDDP-TAQTLIKEEVLKWQEAGANIVYRHRILRDGYK 296 (482)
Q Consensus 219 ~~P~VsViIP~yne~-~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd-~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~K 296 (482)
..|+||||||+|||+ +.+.+||+|+++|+||+..+|||||||+|+| .+.++++++.++++ .++.++..+.+.| +
T Consensus 27 ~~p~vSVIIp~yN~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l~~~~~~~~---~~v~vi~~~~n~G-~ 102 (472)
T 1xhb_A 27 NLPTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVKKLK---VPVHVIRMEQRSG-L 102 (472)
T ss_dssp CCCCEEEEEEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHHHHHSSS---SCEEEEECSSCCC-H
T ss_pred CCCCeEEEEEeCCCCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHHHHHHHHHHCC---CcEEEEECCCCCC-h
Confidence 689999999999999 9999999999999998765789999999887 58888887766432 2344444555555 9
Q ss_pred cccHHHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHH---HHH--hhhhhhhh
Q 011596 297 AGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLT---RLQ--DINLSFHF 371 (482)
Q Consensus 297 a~aln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~---~~~--~~~~~~~~ 371 (482)
+.++|.|++ .+++|||+|+|+|+.++|++|+.++..+.+++.++++ +.....+.+..... ... .+.+...+
T Consensus 103 ~~a~N~g~~---~A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~~v~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (472)
T 1xhb_A 103 IRARLKGAA---VSRGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVC-PIIDVISDDTFEYMAGSDMTYGGFNWKLNF 178 (472)
T ss_dssp HHHHHHHHH---HCCSSEEEEEESSEEECTTCHHHHHHHHHHCTTEEEE-EEEEEECSSSCCEECCCTTEEEEECTTCCE
T ss_pred HHHHHHHHH---hccCCeEEEECCCeEeCccHHHHHHHHHHhCCCEEEE-eeeeeEcCCCceeccCCCcccceeecccee
Confidence 999999999 6899999999999999999999999999988876554 33333332211000 000 00000000
Q ss_pred h--------hhhhh-c-cccccccccccceEeeeHHHHHHcCCCCCCCc---hhHHHHHHHHHHCCCcEEEeccceeccc
Q 011596 372 E--------VEQQV-N-GVFINFFGFNGTAGVWRIKALEDSGGWMERTT---VEDMDIAVRAHLRGWKFIFLNDVECQCE 438 (482)
Q Consensus 372 ~--------~~~~~-~-~~~~~~~~~~G~~~~~Rr~~l~~iGgf~~~~~---~ED~~l~~rl~~~G~ki~~~~~~~~~~~ 438 (482)
. ..... . ........+.|+++++||++++++|||++... .||.++++|+.+.|+++.++|.+.+++.
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfde~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v~H~ 258 (472)
T 1xhb_A 179 RWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQEIGTYDAGMDIWGGENLEISFRIWQCGGTLEIVTCSHVGHV 258 (472)
T ss_dssp EEEECCHHHHHHTTTCTTSCEECSBCCSSSEEEEHHHHHHTTSCCTTSCTTCCCCSHHHHHHHHTTCEEEEEEEEEEEEE
T ss_pred ecccCCHHHHhcccCCCCCcccCccccceeEEEEHHHHHHcCCCCCcccccCchhHHHHHHHHhcCCeEEEccCcEEEEE
Confidence 0 00000 0 00112233679999999999999999998754 6999999999999999999999997664
Q ss_pred CCcC-------------HHHHHHHHHhhhhhhHHHHHHhChhh
Q 011596 439 LPES-------------YEAYRKQQHRWHSGPMQLFRLCLPDI 468 (482)
Q Consensus 439 ~p~t-------------~~~~~~qr~RW~~G~~q~~~~~~~~i 468 (482)
...+ .....+...+|..+..+.+....|..
T Consensus 259 ~~~~~~~~~~~~~~~~~~~n~~r~~~~W~d~~~~~~~~~~p~~ 301 (472)
T 1xhb_A 259 FRKATPYTFPGGTGQIINKNNRRLAEVWMDEFKNFFYIISPGV 301 (472)
T ss_dssp C------------CHHHHHHHHHHHHHHCGGGGHHHHHTSTTG
T ss_pred ccCcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhCccc
Confidence 4332 23455666789999888887776654
|
| >3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.3e-25 Score=213.51 Aligned_cols=205 Identities=14% Similarity=0.148 Sum_probs=142.1
Q ss_pred CCCeEEEEeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccc
Q 011596 219 FFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAG 298 (482)
Q Consensus 219 ~~P~VsViIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~ 298 (482)
..|+|||+||+||+++.|++||+|+++|+|++ +||+|+||+|+|.+.++++++.++++ +++++ + .++ .|++.
T Consensus 3 ~~p~vsViIp~yn~~~~l~~~l~Sl~~q~~~~--~eiIvvDd~S~d~t~~~~~~~~~~~~--~i~~i--~-~~n-~G~~~ 74 (240)
T 3bcv_A 3 LIPKVSVIVPIYNVEKYLDQCVQALLAQTLSD--IEIILIDDESPDNCPKICDDYAAQYP--NIKVI--H-KKN-AGLGM 74 (240)
T ss_dssp CCCSEEEEEEESSCTTTHHHHHHHHHTCSSSS--EEEEEEECCCSSSHHHHHHHHHHHCS--SEEEE--E-CCC-CCHHH
T ss_pred CCCcEEEEEecCCCHHHHHHHHHHHHhCcCCC--eEEEEEECCCCcCHHHHHHHHHhhCC--CEEEE--E-CCC-CChHH
Confidence 46889999999999999999999999999986 78999999999999998888776532 34433 3 334 45999
Q ss_pred cHHHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCC----hHHH-HHhhhhhhhhhh
Q 011596 299 NLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDEN----LLTR-LQDINLSFHFEV 373 (482)
Q Consensus 299 aln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~----~~~~-~~~~~~~~~~~~ 373 (482)
++|.|++ .+++|||+++|+|+.++|++|++++..+.+ ++.+++.+.......+.. +... .....+.. ...
T Consensus 75 a~N~g~~---~a~g~~i~~lD~Dd~~~~~~l~~l~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 149 (240)
T 3bcv_A 75 ACNSGLD---VATGEYVAFCDSDDYVDSDMYMTMYNVAQK-YTCDAVFTGLKRITMAGIPTGTVTHQKEFKLYKNK-NEI 149 (240)
T ss_dssp HHHHHHH---HCCSSEEEECCTTCCCCTTHHHHHHHHHHH-HTCSEEEC--------------------CEEECSH-HHH
T ss_pred HHHHHHH---HcCCCEEEEECCCCcCCHHHHHHHHHHHHh-cCCCEEEEeeEEEccCCccccccccccccccccCH-HHH
Confidence 9999999 689999999999999999999999999986 345555554433332221 1100 00000000 000
Q ss_pred hhhhccccc--------cccccccceEeeeHHHHHHcC-CCCCC--CchhHHHHHHHHHHCCCcEEEeccceec
Q 011596 374 EQQVNGVFI--------NFFGFNGTAGVWRIKALEDSG-GWMER--TTVEDMDIAVRAHLRGWKFIFLNDVECQ 436 (482)
Q Consensus 374 ~~~~~~~~~--------~~~~~~G~~~~~Rr~~l~~iG-gf~~~--~~~ED~~l~~rl~~~G~ki~~~~~~~~~ 436 (482)
......... .....+|+++++||++++++| ||++. ...||.++++|+..+|+++.++|++..+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~g~~f~~~~~~~~eD~~~~~r~~~~g~~i~~~~~~~~~ 223 (240)
T 3bcv_A 150 HTLLKDLIASDPYAREERAIQVSAKVVLYRRNLIEKKHLRFVSERILPSEDLIFNVDVLANSNIVCVLPQTFYN 223 (240)
T ss_dssp HHHHGGGTSSCHHHHHHHHHHHTCSCEEEEHHHHHHTTCCCCCTTTCTTHHHHHHHHHHTTCSCEEECC-----
T ss_pred HHHHHHHhhcchhhccccccccchhheeeeHHHHHHcCCccCCCCCccCCCHHHHHHHHHhCCEEEEECCCeEE
Confidence 000001100 112246788999999999999 99886 4679999999999999999999998643
|
| >1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=3.3e-26 Score=219.90 Aligned_cols=216 Identities=13% Similarity=0.141 Sum_probs=153.8
Q ss_pred CeEEEEeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEecc--C-----CC
Q 011596 221 PMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRI--L-----RD 293 (482)
Q Consensus 221 P~VsViIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~--~-----~~ 293 (482)
|+|||+||+||+++.+.+||+|+++|+||+ ++|+|+||+|+|.+.++++++.. ..+++ +...+ . .+
T Consensus 1 p~vSViIp~yn~~~~l~~~l~Sl~~q~~~~--~eiivvDd~S~d~t~~~~~~~~~---~~~i~--~i~~~~~~~~~~~~n 73 (255)
T 1qg8_A 1 PKVSVIMTSYNKSDYVAKSISSILSQTFSD--FELFIMDDNSNEETLNVIRPFLN---DNRVR--FYQSDISGVKERTEK 73 (255)
T ss_dssp CCEEEEEEESSCTTTHHHHHHHHHTCSCCC--EEEEEEECSCCHHHHHHHGGGGG---STTEE--EEECCCCSHHHHHSS
T ss_pred CeEEEEEEcCCCHHHHHHHHHHHHhccCCc--eEEEEEECCCCchHHHHHHHHhh---cCCEE--EEecccccccccccc
Confidence 689999999999999999999999999986 78999999999999888775432 23444 44333 0 34
Q ss_pred CCccccHHHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeee--cCCCChHHHHHhhhhhhhh
Q 011596 294 GYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFV--NKDENLLTRLQDINLSFHF 371 (482)
Q Consensus 294 g~Ka~aln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~--n~~~~~~~~~~~~~~~~~~ 371 (482)
.|++.++|.|++ .+++|||+++|+|+.++|++|++++..+.++|++++|++..... +........... .
T Consensus 74 ~G~~~a~N~gi~---~a~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~--~---- 144 (255)
T 1qg8_A 74 TRYAALINQAIE---MAEGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTYHLNENRDIVKETVR--P---- 144 (255)
T ss_dssp CHHHHHHHHHHH---HCCCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEEEEEEEEEEC---CEEEEEEE--C----
T ss_pred cCHHHHHHHHHH---HcCCCEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEeceEEEEeCCCCcchhhccC--c----
Confidence 459999999999 68999999999999999999999999999889999999987665 443221111000 0
Q ss_pred hhhhhhccccccccccccceEeeeHHHHHHcC-CC------CCC-CchhHHHHHHHHHHCCCcEEEeccceecc-cCCcC
Q 011596 372 EVEQQVNGVFINFFGFNGTAGVWRIKALEDSG-GW------MER-TTVEDMDIAVRAHLRGWKFIFLNDVECQC-ELPES 442 (482)
Q Consensus 372 ~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~iG-gf------~~~-~~~ED~~l~~rl~~~G~ki~~~~~~~~~~-~~p~t 442 (482)
. ..... .....+.|+++++||++++++| +| ++. ...||.+++.++...| ++.++|++.+++ ..+.+
T Consensus 145 -~-~~~~~--~~~~~~~~~~~~~rr~~~~~~g~~f~~~~~~~~~~~~~eD~~~~~r~~~~g-~~~~~~~~~~~~r~~~~s 219 (255)
T 1qg8_A 145 -A-AQVTW--NAPCAIDHCSVMHRYSVLEKVKEKFGSYWDESPAFYRIGDARFFWRVNHFY-PFYPLDEELDLNYITDQS 219 (255)
T ss_dssp -C-CSCBS--CCTTTSCGGGEEEETHHHHHHHHHHSSSSCCCGGGSTTHHHHHHHHHTTTC-CBEEEEEEEEEEEEC---
T ss_pred -h-HHHHH--hhcCCCccceEEEEHHHHHhhcccccccccCCcccchHHHHHHHHHHHHhC-CEEEecCcEEEEEEcCCc
Confidence 0 00000 1222367899999999999998 78 443 5679999999999987 799999988554 34444
Q ss_pred HHH--HHHHHHhhhhhh
Q 011596 443 YEA--YRKQQHRWHSGP 457 (482)
Q Consensus 443 ~~~--~~~qr~RW~~G~ 457 (482)
... ..+++.+|....
T Consensus 220 ~s~~~~~~~~~~~~~~~ 236 (255)
T 1qg8_A 220 IHFQLFELEKNEFVRNL 236 (255)
T ss_dssp -----------CTGGGS
T ss_pred cchhHHHHHHHHHHHhc
Confidence 433 345566666543
|
| >2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=3.5e-25 Score=237.85 Aligned_cols=240 Identities=13% Similarity=0.151 Sum_probs=172.9
Q ss_pred CCCeEEEEeecCCch-HHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHH-HHHHHHHHHHhhhCCCeEEEEeccCCCCCc
Q 011596 219 FFPMVLVQIPMCNEK-EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTA-QTLIKEEVLKWQEAGANIVYRHRILRDGYK 296 (482)
Q Consensus 219 ~~P~VsViIP~yne~-~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t-~~~~~~~~~~~~~~~v~vv~~~~~~~~g~K 296 (482)
..|+||||||+|||+ +.+.+||.|+++|+||+..+|||||||+|+|.+ .++++++.+++ .+++ +++.+.+.| +
T Consensus 110 ~~P~vSVIIp~yNe~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l~~~~~~~--~~v~--vi~~~~n~G-~ 184 (570)
T 2d7i_A 110 TLPNTSIIIPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYMALF--PSVR--ILRTKKREG-L 184 (570)
T ss_dssp SCCCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHHHHHHTTS--TTEE--EEECSSCCC-H
T ss_pred CCCCeEEEEEECCCCHHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHHHHHHHhC--CeEE--EEECCCCCC-H
Confidence 589999999999998 999999999999999875568999999998888 88887766543 2344 444444555 9
Q ss_pred cccHHHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHH-----H-Hhhhhhhh
Q 011596 297 AGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTR-----L-QDINLSFH 370 (482)
Q Consensus 297 a~aln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~-----~-~~~~~~~~ 370 (482)
+.++|.|++ .+++|||+|+|+|+.++|++|+.++..+.+++++ +|++.....+.+...... . ..+.+...
T Consensus 185 ~~A~N~G~~---~A~gd~i~fLD~D~~~~p~~L~~ll~~l~~~~~~-vv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (570)
T 2d7i_A 185 IRTRMLGAS---VATGDVITFLDSHCEANVNWLPPLLDRIARNRKT-IVCPMIDVIDHDDFRYETQAGDAMRGAFDWEMY 260 (570)
T ss_dssp HHHHHHHHH---HCCSSEEEECCSSEEECTTCSHHHHHHHHHCTTE-EEEEEEEEECTTTCCEECCTTSSCEEEECTTCC
T ss_pred HHHHHHHHH---hcCCCEEEEEcCCccccccHHHHHHHHHHhCCCE-EEeeeeeccCCCchhhccccCCccccccccccc
Confidence 999999999 6899999999999999999999999999987765 555554444332110000 0 00000000
Q ss_pred hhhhh-----hhc--cccccccccccceEeeeHHHHHHcCCCCCCCc---hhHHHHHHHHHHCCCcEEEeccceecccC-
Q 011596 371 FEVEQ-----QVN--GVFINFFGFNGTAGVWRIKALEDSGGWMERTT---VEDMDIAVRAHLRGWKFIFLNDVECQCEL- 439 (482)
Q Consensus 371 ~~~~~-----~~~--~~~~~~~~~~G~~~~~Rr~~l~~iGgf~~~~~---~ED~~l~~rl~~~G~ki~~~~~~~~~~~~- 439 (482)
+.... ... ........+.|+++++||++++++|||++... .||.++++|+.+.|+++.++|.+.+++..
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~~~v~H~~r 340 (570)
T 2d7i_A 261 YKRIPIPPELQKADPSDPFESPVMAGGLFAVDRKWFWELGGYDPGLEIWGGEQYEISFKVWMCGGRMEDIPCSRVGHIYR 340 (570)
T ss_dssp EEEECCCTTTCCSSTTSCEECSSCCSSSEEEEHHHHHHTTSSCTTCCSSSSHHHHHHHHHHHTTCEEEEEEEEEEEECCC
T ss_pred ccccccchhhhccCCCcceecccccceEEEEEHHHHHhcCCCCCcccccCcchHHHHHHHHhCCCeEEEccCeEEEEEcc
Confidence 00000 000 00112223679999999999999999998743 69999999999999999999999977641
Q ss_pred ---CcC-------HHHHHHHHHhhhhhhHHHHHHhChh
Q 011596 440 ---PES-------YEAYRKQQHRWHSGPMQLFRLCLPD 467 (482)
Q Consensus 440 ---p~t-------~~~~~~qr~RW~~G~~q~~~~~~~~ 467 (482)
|.+ .+...+...+|....-+.+....|.
T Consensus 341 ~~~~~~~~~~~~~~~n~~r~~~~W~d~~~~~~y~~~p~ 378 (570)
T 2d7i_A 341 KYVPYKVPAGVSLARNLKRVAEVWMDEYAEYIYQRRPE 378 (570)
T ss_dssp SSCCSCCCSSCCHHHHHHHHHHHHCGGGHHHHHTTCGG
T ss_pred ccCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 211 3456666788998888777666553
|
| >2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=8e-24 Score=229.85 Aligned_cols=218 Identities=20% Similarity=0.236 Sum_probs=161.7
Q ss_pred CCCeEEEEeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccc
Q 011596 219 FFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAG 298 (482)
Q Consensus 219 ~~P~VsViIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~ 298 (482)
..|.|||+||+||+++.+.+||.|+.+|+++. .++|+|+||+|+|.+.++++++.+ .. .+.+...+++.+++++
T Consensus 91 ~~p~vsviIp~~n~~~~l~~~l~sl~~q~~~~-~~eiivvDd~s~d~t~~~~~~~~~---~~--~i~~i~~~~~~~g~~~ 164 (625)
T 2z86_A 91 IIDGLSIVIPTYNRAKILAITLACLCNQKTIY-DYEVIVADDGSKENIEEIVREFES---LL--NIKYVRQKDYGYQLCA 164 (625)
T ss_dssp CCCCEEEEEEESSCHHHHHHHHHHHHTCCCSS-CEEEEEEEESCSSCHHHHHHTTTT---TS--CEEEEEECCCSCCHHH
T ss_pred cCCcEEEEEecCCcHHHHHHHHHHHHhhccCC-CeEEEEEeCCCchhHHHHHHHhhh---cC--CeEEEEeCCCCcchhH
Confidence 46899999999999999999999999998875 688999999999999887775422 22 3444444444446999
Q ss_pred cHHHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHHHHhhhhhh---------
Q 011596 299 NLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSF--------- 369 (482)
Q Consensus 299 aln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~~~~~~~~~--------- 369 (482)
++|.|++ .+++|||+++|+|+.++|++|..++..+..+|.++++++.....+................
T Consensus 165 a~N~g~~---~a~g~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (625)
T 2z86_A 165 VRNLGLR---AAKYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPEIITNN 241 (625)
T ss_dssp HHHHHHH---HCCSSEEEEECTTEEECTTHHHHHHHHHHHCTTEEEECCEEEECCTTCCHHHHHHSTTGGGTSCC-----
T ss_pred HHHHHHH---hCCcCEEEEECCCCCCCHHHHHHHHHHHhcCCceEEEEeeeeccCcccchhhcccchHHhhhcchhccCC
Confidence 9999999 5899999999999999999999999999988998888887665444322222111100000
Q ss_pred -----------------hhhhhhhhccccccccccccceEeeeHHHHHHcCCCCCCCc---hhHHHHHHHHHHCCCcEEE
Q 011596 370 -----------------HFEVEQQVNGVFINFFGFNGTAGVWRIKALEDSGGWMERTT---VEDMDIAVRAHLRGWKFIF 429 (482)
Q Consensus 370 -----------------~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~iGgf~~~~~---~ED~~l~~rl~~~G~ki~~ 429 (482)
.+...............+.|+++++||++++++|||++... .||.+++.|+.++|+++.+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~l~~iGgfde~~~~~g~ED~dl~~Rl~~~G~~i~~ 321 (625)
T 2z86_A 242 QVAGKVEQNKSVDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLFRAGWFDEEFTHWGGEDNEFGYRLYREGCYFRS 321 (625)
T ss_dssp ----------CCCTHHHHHHHTTTTTTCSCGGGGCCTTEEEEETHHHHHHCCCCTTCSSCCCHHHHHHHHHHHTTCEEEE
T ss_pred chhhhhccCCccccchhhhcccccccccCCceeEEeeceeeeEHHHHHHhCCCccccccCCcchhhhhhhHHhCCceEEE
Confidence 00000000111112234789999999999999999998754 6999999999999999999
Q ss_pred eccceecccCCcCHHH
Q 011596 430 LNDVECQCELPESYEA 445 (482)
Q Consensus 430 ~~~~~~~~~~p~t~~~ 445 (482)
+|++.+++..+.+...
T Consensus 322 ~p~~~v~H~~~~~~~~ 337 (625)
T 2z86_A 322 VEGAMAYHQEPPGKEN 337 (625)
T ss_dssp CGGGCEEEECCC----
T ss_pred cccchhhccCCccccc
Confidence 9999998887776443
|
| >2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.6e-24 Score=229.27 Aligned_cols=251 Identities=15% Similarity=0.168 Sum_probs=172.4
Q ss_pred CCCeEEEEeecCCchH-HHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCcc
Q 011596 219 FFPMVLVQIPMCNEKE-VYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKA 297 (482)
Q Consensus 219 ~~P~VsViIP~yne~~-~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka 297 (482)
..|.||||||+|||++ .+.++|.|+++|+|++..+|||||||+|+|.+.+.. .++ ..++ .++..+.+.| ++
T Consensus 64 ~~p~vSVIIp~yN~~~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~~~~---~~~--~~~v--~vi~~~~n~G-~~ 135 (501)
T 2ffu_A 64 DLPATSVVITFHNEARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDGAL---LGK--IEKV--RVLRNDRREG-LM 135 (501)
T ss_dssp SCCCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHHHHG---GGG--BTTE--EEEECSSCCH-HH
T ss_pred CCCCEEEEEEeCcCcHHHHHHHHHHHHhhCchhhceeEEEEECCCCchHHHHH---Hhc--CCCE--EEEECCCCcC-HH
Confidence 6899999999999997 999999999999998755799999999988774322 222 2234 4444444555 99
Q ss_pred ccHHHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChH-HHH----Hhhhhhhh--
Q 011596 298 GNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLL-TRL----QDINLSFH-- 370 (482)
Q Consensus 298 ~aln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~-~~~----~~~~~~~~-- 370 (482)
.++|.|++ .+++|||+|+|+|+.++|++|+.++..+.+++. ++|++.....+.+.-.. ... ..+.+...
T Consensus 136 ~A~N~G~~---~A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (501)
T 2ffu_A 136 RSRVRGAD---AAQAKVLTFLDSHCECNEHWLEPLLERVAEDRT-RVVSPIIDVINMDNFQYVGASADLKGGFDWNLVFK 211 (501)
T ss_dssp HHHHHHHH---HCCSSEEEECCSSEEECTTCHHHHHHHHHHCTT-EEEEEEEEEECTTTCCEECBCSSEEEEECTTCCEE
T ss_pred HHHHHHHH---hcCCCEEEEECCCcccCccHHHHHHHHHHhCCC-eEEEeeeccCcCCCceeecCCcccceEeeecCCCc
Confidence 99999999 689999999999999999999999999987665 56766554443321000 000 00000000
Q ss_pred ---hhhh---hhh-c-cccccccccccceEeeeHHHHHHcCCCCCCCc---hhHHHHHHHHHHCCCcEEEeccceecccC
Q 011596 371 ---FEVE---QQV-N-GVFINFFGFNGTAGVWRIKALEDSGGWMERTT---VEDMDIAVRAHLRGWKFIFLNDVECQCEL 439 (482)
Q Consensus 371 ---~~~~---~~~-~-~~~~~~~~~~G~~~~~Rr~~l~~iGgf~~~~~---~ED~~l~~rl~~~G~ki~~~~~~~~~~~~ 439 (482)
.... ... . ........+.|+++++||++++++|+|++... .||.++++|+.+.|+++.++|.+.+++..
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfde~~~~~g~ED~dl~~Rl~~~G~~i~~~p~~~v~H~~ 291 (501)
T 2ffu_A 212 WDYMTPEQRRSRQGNPVAPIKTPMIAGGLFVMDKFYFEELGKYDMMMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHVF 291 (501)
T ss_dssp EEECCHHHHHHTSSCTTSCEECSSCCSSSEEEEHHHHHHTTCCCTTCCSSSSHHHHHHHHHHHTTCEEEEEEEEEEEECC
T ss_pred cccCCHHHHhhccCCCCCcccCccccceEEEEEHHHHHHhCCCCccccccCcchHHHHHHHHhcCCeEEEccCcEEEEEc
Confidence 0000 000 0 00111223578999999999999999998743 89999999999999999999999877752
Q ss_pred --------CcC-----HHHHHHHHHhhhhhhHHHHHHhChhh-------hhcCcchhhcccc
Q 011596 440 --------PES-----YEAYRKQQHRWHSGPMQLFRLCLPDI-------IRAKVYILSNTSC 481 (482)
Q Consensus 440 --------p~t-----~~~~~~qr~RW~~G~~q~~~~~~~~i-------~~s~~~~~~k~~~ 481 (482)
|.. .....+...+|.....+.+....|.. +..+..+.+|+.|
T Consensus 292 r~~~~~~~~~~~~~~~~~n~~r~~~~w~d~~~~~~y~~~p~~~~~~~g~~~~r~~lr~~l~c 353 (501)
T 2ffu_A 292 RKQHPYTFPGGSGTVFARNTRRAAEVWMDEYKNFYYAAVPSARNVPYGNIQSRLELRKKLSC 353 (501)
T ss_dssp CSSCCSCCTTCHHHHHHHHHHHHHHHHCGGGHHHHHHHCGGGGGCCCCCCHHHHHHHHHTTC
T ss_pred cCcCCCcCCccchhHHHHHHHHHHHHHHHHHHHHHhhcCcccccCCccchHHHHHHHHhcCC
Confidence 111 23444555678888777766666654 2223445555554
|
| >2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.8e-23 Score=227.12 Aligned_cols=220 Identities=14% Similarity=0.167 Sum_probs=164.4
Q ss_pred CCCeEEEEeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccc
Q 011596 219 FFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAG 298 (482)
Q Consensus 219 ~~P~VsViIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~ 298 (482)
..|.|||+||+||+++.+.+||+|+++|+|++ ++|+|+||+|+|.+.+++++..+++ .+++++ . ..+ .|++.
T Consensus 373 ~~~~vsiii~~yn~~~~l~~~l~s~~~q~~~~--~eiivvdd~S~d~t~~~~~~~~~~~--~~i~~~--~-~~n-~G~~~ 444 (625)
T 2z86_A 373 RVPLVSIYIPAYNCSKYIVRCVESALNQTITD--LEVCICDDGSTDDTLRILQEHYANH--PRVRFI--S-QKN-KGIGS 444 (625)
T ss_dssp SSCSEEEEEEESSCTTTHHHHHHHHHSSSCCS--EEEEEEEESCSSSHHHHHHHHHTTC--TTEEEE--E-ECC-CCHHH
T ss_pred cCCeEEEEEeCCCCHHHHHHHHHHHHhCcCCC--eEEEEEECcCChhHHHHHHHHHhhC--CcEEEE--e-CCC-CCHHH
Confidence 46899999999999999999999999999986 7899999999999988887665432 234443 2 334 45999
Q ss_pred cHHHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHHHHhhhhhhhhhhhhhhc
Q 011596 299 NLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQQVN 378 (482)
Q Consensus 299 aln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (482)
++|.|++ .+++|||+++|+|+.++|++|++++..+.++|++++|++.....+.+........... .+.... ..
T Consensus 445 a~n~g~~---~a~g~~i~~ld~D~~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~ 517 (625)
T 2z86_A 445 ASNTAVR---LCRGFYIGQLDSDDFLEPDAVELCLDEFRKDLSLACVYTTNRNIDREGNLISNGYNWP---IYSREK-LT 517 (625)
T ss_dssp HHHHHHH---HCCSSEEEECCTTCEECTTHHHHHHHHHHHCTTCSEEEEEEEEECTTSCEEEECCCCS---SCCHHH-HT
T ss_pred HHHHHHH---hcCCCEEEEECCCcccChhHHHHHHHHHHhCCCeeEEEeeeEEECCCCCEeccCcccc---cCCHHH-Hh
Confidence 9999999 5899999999999999999999999999888999999998776665544322110000 000000 00
Q ss_pred cccccccccccceEeeeHHHHHHcCCCCCC-CchhHHHHHHHHHHCCCcEEEeccceec---ccCCcCHHHHHHHHHhhh
Q 011596 379 GVFINFFGFNGTAGVWRIKALEDSGGWMER-TTVEDMDIAVRAHLRGWKFIFLNDVECQ---CELPESYEAYRKQQHRWH 454 (482)
Q Consensus 379 ~~~~~~~~~~G~~~~~Rr~~l~~iGgf~~~-~~~ED~~l~~rl~~~G~ki~~~~~~~~~---~~~p~t~~~~~~qr~RW~ 454 (482)
...+.|+++++|+++++++|||++. ...||+++++|+.+.| ++.++|++..+ +....+......|+.+|.
T Consensus 518 -----~~~~~~~~~~~~r~~~~~~ggfd~~~~~~eD~dl~~r~~~~g-~~~~~~~~~~~~r~h~~~~s~~~~~~~~~~~~ 591 (625)
T 2z86_A 518 -----SAMICHHFRMFTARAWNLTEGFNESISNAVDYDMYLKLSEVG-PFKHINKICYNRVLHGENTSIKKLDIQKENHF 591 (625)
T ss_dssp -----TSCCCCSCEEEEHHHHTTTTCCCSSCSSCHHHHHHHHHTTTS-CEEEEEEEEEEEECC----CCSSHHHHHHHHH
T ss_pred -----hcccCCceEEEEHHHHHHhCCCCCccCChHHHHHHHHHHHhC-CEEEeCCcEEEEEECCCccchhhHHHHHHHHH
Confidence 1125788899999999999999886 4679999999999999 99999998854 333445555556665555
Q ss_pred hhhHH
Q 011596 455 SGPMQ 459 (482)
Q Consensus 455 ~G~~q 459 (482)
....+
T Consensus 592 ~~~~~ 596 (625)
T 2z86_A 592 KVVNE 596 (625)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44333
|
| >4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.2e-22 Score=220.44 Aligned_cols=229 Identities=13% Similarity=0.117 Sum_probs=156.4
Q ss_pred CCCeEEEEeecCCchHHHHHHHHHHHhCCCCCCc-eEEEEEcCCCCHH--HHHHHHHHHHHhhhCCCeEEEEeccCCCCC
Q 011596 219 FFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSK-ILIQVLDDSDDPT--AQTLIKEEVLKWQEAGANIVYRHRILRDGY 295 (482)
Q Consensus 219 ~~P~VsViIP~yne~~~l~~tL~Sll~q~yp~~~-~~IiVvDdssdd~--t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~ 295 (482)
..|+||||||+||+++.+.+||+|+.+|+|+.+. .+||||||+|+|. +..+. +..+.. .. ++.++..+ |.|
T Consensus 178 ~~pkVSVVIptYN~~~~L~~~L~SL~~qt~~~~~~~EIIVVDNgStD~s~~~~~~-e~~~~~-~~--~I~vI~~~-N~G- 251 (657)
T 4fix_A 178 GTANIAVGIPTFNRPADCVNALRELTADPLVDQVIGAVIVPDQGERKVRDHPDFP-AAAARL-GS--RLSIHDQP-NLG- 251 (657)
T ss_dssp SCCCEEEECCBSSCHHHHHHHHHHHTTSHHHHTTEEEEEEEECSSSCGGGSTTHH-HHHHHH-GG--GEEEEECC-CCH-
T ss_pred CCCeEEEEEEecCCHHHHHHHHHHHHcCccccCCCCEEEEEECcCCCccchHHHH-HHHHhc-CC--CEEEEECC-CCC-
Confidence 4689999999999999999999999999984322 4899999998762 22222 222211 22 34444443 444
Q ss_pred ccccHHHHhhhcccC-CceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCC------hHHH--H----
Q 011596 296 KAGNLKSAMNCSYVK-DYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDEN------LLTR--L---- 362 (482)
Q Consensus 296 Ka~aln~al~~~~~a-~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~------~~~~--~---- 362 (482)
.+++.|.|++.+... ++|||+++|+|+.++|++|++++..+..+|+++++++.......... +... .
T Consensus 252 ~a~a~N~Gl~~A~g~~~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~~~vg~~il~~~~~~~~~~~g~~~~~~~~~~~~ 331 (657)
T 4fix_A 252 GSGGYSRVMYEALKNTDCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLVGGQMLNLQEPSHLHIMGEVVDRSIFMWTA 331 (657)
T ss_dssp HHHHHHHHHHHHHHHCCCSEEEEECSSEEECTHHHHHHHHHHHHBSSCCEEEEEEEETTSTTEECCSCEEEETTTTEEEE
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEECCCCccChhHHHHHHHHHHhCCCcEEEEeEEecCCCCceeeecccEeccccccccc
Confidence 889999999853222 67999999999999999999999999988899999887654433211 0000 0
Q ss_pred -Hhhhhhhh-----hh----hhhhhccccccccccccceEeeeHHHHHHcCCCCCC-CchhHHHHHHHHHHCCCcEEEec
Q 011596 363 -QDINLSFH-----FE----VEQQVNGVFINFFGFNGTAGVWRIKALEDSGGWMER-TTVEDMDIAVRAHLRGWKFIFLN 431 (482)
Q Consensus 363 -~~~~~~~~-----~~----~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~iGgf~~~-~~~ED~~l~~rl~~~G~ki~~~~ 431 (482)
....+... .. ....... ...+....|+++++|+++++++|+|++. ...||.|+++|+..+||++.++|
T Consensus 332 ~~~~~~~~~f~~~~l~~~~~~~~~~~~-~~~v~~~~g~~~lirr~v~~~vGgfd~~F~~~ED~Dl~lR~~~~G~ki~~~p 410 (657)
T 4fix_A 332 APHAEYDHDFAEYPLNDNNSRSKLLHR-RIDVDYNGWWTCMIPRQVAEELGQPLPLFIKWDDADYGLRAAEHGYPTVTLP 410 (657)
T ss_dssp CTTCCSCEETTTSCSSCSSHHHHGGGB-CCCCSBCCTTEEEEEHHHHHHHCSCCSCSSSSHHHHHHHHHHHTTCCEEEEE
T ss_pred ccccccccccccccccccccccccccc-ceeccccchhHhHhhHHHHHHhCCChhHhccCcHHHHHHHHHHcCCeEEEEC
Confidence 00000000 00 0011111 1123346889999999999999999854 34699999999999999999999
Q ss_pred cceecccCCcC------HHHHHHHHHhhh
Q 011596 432 DVECQCELPES------YEAYRKQQHRWH 454 (482)
Q Consensus 432 ~~~~~~~~p~t------~~~~~~qr~RW~ 454 (482)
++.+++....+ ++.|+..|.|+.
T Consensus 411 ~a~V~H~~~~~~~~~s~~r~Yy~~RN~l~ 439 (657)
T 4fix_A 411 GAAIWHMAWSDKDDAIDWQAYFHLRNRLV 439 (657)
T ss_dssp EEEEEECCSSSSCCTTSTHHHHHHHHHHH
T ss_pred CEEEEEcCcCccccccHHHHHHHHHHHHH
Confidence 99988855322 456666665543
|
| >3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A | Back alignment and structure |
|---|
Probab=99.87 E-value=6.9e-22 Score=197.97 Aligned_cols=203 Identities=14% Similarity=0.087 Sum_probs=142.8
Q ss_pred CCCeEEEEeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEE----eccCCCC
Q 011596 219 FFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYR----HRILRDG 294 (482)
Q Consensus 219 ~~P~VsViIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~----~~~~~~g 294 (482)
..|+|||+||+||+++.|.+||+|+++|+|+. .++|+|+||+|+|.+.++++++ +.++... .....+.
T Consensus 46 ~~~~vSViIp~yN~~~~l~~~l~sl~~q~~~~-~~eiivVDdgS~D~t~~~~~~~-------~~~~~~~~~~~~~~~~n~ 117 (329)
T 3ckj_A 46 AGRTISVVLPALDEEDTIGSVIDSISPLVDGL-VDELIVLDSGSTDDTEIRAVAA-------GARVVSREQALPEVPIRP 117 (329)
T ss_dssp TTCCEEEEEEESSCTTTHHHHHHHHGGGBTTT-BSEEEEEECSCCSSHHHHHHHT-------TCEEEEHHHHCTTSCCCC
T ss_pred cCCcEEEEEeeCCCHHHHHHHHHHHHHhhCCC-CcEEEEEeCCCCchHHHHHHHh-------hhhhccceeeeccCCCCC
Confidence 45899999999999999999999999999984 4789999999999998887743 3332211 1133445
Q ss_pred CccccHHHHhhhcccCCceEEEEEcCCCC-CChHHHHHHHHHhhcCCCeEEEeeeeeeecC-CC-------ChHHHHHhh
Q 011596 295 YKAGNLKSAMNCSYVKDYEFVAIFDADFQ-PNPDFLRRTVPHFKDNEELGLVQARWSFVNK-DE-------NLLTRLQDI 365 (482)
Q Consensus 295 ~Ka~aln~al~~~~~a~~d~Vl~lDaD~~-~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~-~~-------~~~~~~~~~ 365 (482)
|++.|+|.|++ .+++|||+++|+|+. ++|++|.+++..+.++|++++|+|....... +. ....+....
T Consensus 118 G~~~a~n~g~~---~a~gd~i~~lD~D~~~~~p~~l~~l~~~l~~~~~~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (329)
T 3ckj_A 118 GKGEALWRSLA---ASRGDIVVFVDSDLINPHPMFVPWLVGPLLTGDGVHLVKSFYRRPLNVGDAGGGAGATGGGRVTEL 194 (329)
T ss_dssp SHHHHHHHHHH---HCCCSEEEECCTTEESCCTTHHHHHHHHHHSCSSCCEEEEEEECC---------------CHHHHH
T ss_pred CHHHHHHHHHH---hCCCCEEEEECCCCCCcChHHHHHHHHHHHhCCCccEEEEEecccccCCcccccccccCCCceehh
Confidence 59999999999 689999999999999 8999999999997778999999997654321 10 111111110
Q ss_pred hhhhhhhhhhhhccccccccccccceEeeeHHHHHHcCCCCCCCchhHHHHHHHHHH-CCCc-EEEeccceecc
Q 011596 366 NLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEDSGGWMERTTVEDMDIAVRAHL-RGWK-FIFLNDVECQC 437 (482)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~iGgf~~~~~~ED~~l~~rl~~-~G~k-i~~~~~~~~~~ 437 (482)
... .................|+++++||++++++| |++ ...||.++..++.+ .|++ +..++.....+
T Consensus 195 ~~~---~~~~~~~~~~~~~~~~~~g~~~~rr~~l~~i~-f~~-~~~~D~~l~~r~~~~~g~~~i~~v~~~~r~h 263 (329)
T 3ckj_A 195 VAR---PLLAALRPELGCILQPLGGEYAATRELLTSVP-FAP-GYGVEIGLLVDTFDRLGLDAIAQVNLGVREH 263 (329)
T ss_dssp THH---HHHHHHCGGGGGCSCTTCSCEEEEHHHHTTSC-BCC-GGGHHHHHHHHHHHHHCGGGEEEEEEEECEE
T ss_pred hHH---HHHHHhhhhhccccCCCccceeeeHHHHHhCC-CCC-CCcccHHHHHHHHHhcCCccEeeecceEEec
Confidence 000 00000001111222346778899999999996 755 46799999999987 6775 77777655333
|
| >3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=7.6e-22 Score=217.97 Aligned_cols=200 Identities=12% Similarity=0.117 Sum_probs=0.0
Q ss_pred CCeEEEEeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCcccc
Q 011596 220 FPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGN 299 (482)
Q Consensus 220 ~P~VsViIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~a 299 (482)
+|+|||+||+||+++.|++||+|+++|+|++ +||+||||+|+|.+.+++++..++++ .++++ ...+.+. |.+++
T Consensus 1 Mp~vSVIIp~yN~~~~L~~~L~Sll~Qt~~~--~EIIVVDDgStD~t~~il~~~~~~~~-~~i~~--i~~~~n~-G~~~a 74 (729)
T 3l7i_A 1 MNKLTIIVTYYNAEEYITGCLESIKQQRTQD--FNLIIVNDGSTDQSKKLMDEAIKDYD-KNIRF--IDLDENS-GHAHA 74 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CceEEEEEEcCCCHHHHHHHHHHHHhCCCCC--eEEEEEECCCCCcHHHHHHHHHHhCC-CCEEE--EECCCCC-CHHHH
Confidence 4789999999999999999999999999986 77999999999999999887766432 23443 3333344 49999
Q ss_pred HHHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHHHHhhhhhhhhhhhhhhcc
Q 011596 300 LKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQQVNG 379 (482)
Q Consensus 300 ln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (482)
+|.|++ .++||||+++|+|+.++|++|++++..+. ++++. .+.......+............. ..........
T Consensus 75 rN~gi~---~A~gdyI~flD~Dd~~~p~~l~~l~~~l~-~~d~v--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 147 (729)
T 3l7i_A 75 RNIALE---EVETPYFMFLDADDELASYAITFYLEKFN-NTDGL--IAPIHSFTTQRPQFVDLDRVRVE-YFNAKENINS 147 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHH---hccCCEEEEECCCCCCChhHHHHHHHHhc-CCCEE--EEeeEEeecCCCccccccceeee-eecchhhHHH
Confidence 999999 68999999999999999999999999998 45443 33322222211111111111100 0000000001
Q ss_pred ccccccccccceEeeeHHHHHHcC-CCCCC-CchhHHHHHHHHHHCCCcEEEe-cccee
Q 011596 380 VFINFFGFNGTAGVWRIKALEDSG-GWMER-TTVEDMDIAVRAHLRGWKFIFL-NDVEC 435 (482)
Q Consensus 380 ~~~~~~~~~G~~~~~Rr~~l~~iG-gf~~~-~~~ED~~l~~rl~~~G~ki~~~-~~~~~ 435 (482)
. .....++++++||++++++| +|++. ...||.+++.++..+|+++.++ +.+..
T Consensus 148 ~---~~~~~~~~~~~rr~~l~~~gl~fde~~~~~ED~d~~~rl~~~g~~i~~~~~~~~~ 203 (729)
T 3l7i_A 148 F---LRKQSACNIIFRTAIVRAHHIRFNENLNTYVDWSFVLEYMKYVNKFVRIFNFPFY 203 (729)
T ss_dssp -----------------------------------------------------------
T ss_pred H---hhccchhheeeeHHHHHHcCCCcCCCCCcccCHHHHHHHHHhcCCEEEecCcEEE
Confidence 1 11246778999999999999 89887 4789999999999999999999 55553
|
| >3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=4.7e-19 Score=180.69 Aligned_cols=199 Identities=14% Similarity=0.055 Sum_probs=140.7
Q ss_pred CCeEEEEeecCCchHHHHHHHHHHHh--CCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEe----ccCCC
Q 011596 220 FPMVLVQIPMCNEKEVYQQSIAAVCN--LDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRH----RILRD 293 (482)
Q Consensus 220 ~P~VsViIP~yne~~~l~~tL~Sll~--q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~----~~~~~ 293 (482)
.|+|||+||+|||++.|.++|+|+.+ |+|+. .++|+||||+|+|.|.+++++. +.+++... +...+
T Consensus 93 ~p~vSVVIP~yNe~~~l~~~l~sl~~~l~~~~~-~~EIIVVDDgStD~T~~i~~~~-------~~~v~~~~~~~i~~~~n 164 (387)
T 3f1y_A 93 GLTVSAVLPSRNVADTVGGIIDEIHALNERAPL-IDQILVVDADSEDGTAGVAASH-------GAEVYSENELMSGYGDA 164 (387)
T ss_dssp TCCEEEEEEESSCTTTHHHHHHHHHHHHHHSCC-CSEEEEEECSCSSSHHHHHHHT-------TCEEEEGGGTTGGGCSC
T ss_pred CCeEEEEEEcCCCHHHHHHHHHHHHHHHhcCCC-CeEEEEEcCcCCccHHHHHHHh-------CchhcccceeEecCCcc
Confidence 57899999999999999999999987 46653 3689999999999998888743 33433211 12334
Q ss_pred CCccccHHHHhhhcccCCceEEEEEcCCCC-CChHHHHHHHHHhhcCCCeEEEeeeeeeecCC--------CChHHHHHh
Q 011596 294 GYKAGNLKSAMNCSYVKDYEFVAIFDADFQ-PNPDFLRRTVPHFKDNEELGLVQARWSFVNKD--------ENLLTRLQD 364 (482)
Q Consensus 294 g~Ka~aln~al~~~~~a~~d~Vl~lDaD~~-~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~--------~~~~~~~~~ 364 (482)
.||+.|+|.|++ .+++|||+++|+|+. ++|++|.+++..+.++|++++|.|........ .+...++..
T Consensus 165 ~G~g~A~n~G~~---~A~gd~i~~lDaD~~~~~p~~L~~l~~~l~~~p~~d~v~G~~~~~~~~~~~~~~~~~g~v~~~~~ 241 (387)
T 3f1y_A 165 HGKGDAMWRALS---VTRGDLVLYIDADTRDFRPQLAYGVLGPVLEVPGVRFVKAAYRRPFRKGESIEEDGGGRVTELTA 241 (387)
T ss_dssp CSHHHHHHHHTT---TCCSSEEEECCTTCSSCCTHHHHTTHHHHHHSTTCCEEEEEEECC-------CCBCCSHHHHHTH
T ss_pred CCHHHHHHHHHH---hcCCCEEEEEcCCCCcCCHHHHHHHHHHHHHCCCceEEEEeeccccccccccccccCCchhhhhH
Confidence 459999999999 689999999999999 89999999999998788999999875332111 111111110
Q ss_pred hhhhhhhhhhhhhccccccccccccceEeeeHHHHHHcCCCCCCCchhHHHHHHHHH-HCCCc-EEEeccceecc
Q 011596 365 INLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEDSGGWMERTTVEDMDIAVRAH-LRGWK-FIFLNDVECQC 437 (482)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~iGgf~~~~~~ED~~l~~rl~-~~G~k-i~~~~~~~~~~ 437 (482)
.. ...........+....+.+.++||++++++ +|.+ .+..|.++..++. +.|++ +..+|-....+
T Consensus 242 ~~------l~~~~~~~l~~~~d~~sG~~a~rR~~l~~i-~f~~-gyg~e~ell~~~~~~~G~~~I~eVpi~~~~h 308 (387)
T 3f1y_A 242 KP------LFNLFYPELAGFVQPLAGEFVADRELFCSI-PFLT-GYAVETGIMIDVLKKVGLGAMAQVDLGERQN 308 (387)
T ss_dssp HH------HHHHHCGGGTTCSCTTCSCEEEEHHHHTTS-CEEC-STTHHHHHHHHHHHHHCGGGEEEEEEEECCC
T ss_pred HH------HHHHHhHhhccccccccccEEEEHHHHHhC-CCCC-CcchHHHHHHHHHHhcCCCeEEEEecceeec
Confidence 00 000000000112223577889999999999 6754 5778899988885 55987 99888776433
|
| >2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=4.5e-18 Score=163.40 Aligned_cols=184 Identities=10% Similarity=-0.024 Sum_probs=123.7
Q ss_pred CCCeEEEEeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccc
Q 011596 219 FFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAG 298 (482)
Q Consensus 219 ~~P~VsViIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~ 298 (482)
..+.+||| |+||+++.+++||+|+.++......+|||||||+|+|. . +.+.
T Consensus 14 ~~~~iSII-~~yN~~~~l~~~l~sl~~sl~~q~~~EiIVVDn~s~d~---------------------------~-g~a~ 64 (249)
T 2nxv_A 14 STLMFSVC-SLVRDQAKYDRLLESFERFGFTPDKAEFLAADNREGNQ---------------------------F-HGFS 64 (249)
T ss_dssp CCCSEEEE-EEESCHHHHHHHHHHHHHTTCCTTTEEEEEEECTTSCS---------------------------C-CTTT
T ss_pred CcceEEEE-EeeCCHHHHHHHHHHHHHhccCCCcEEEEEEECCCCCc---------------------------c-cHHH
Confidence 35689974 67999999999999876532222128899999988641 1 2678
Q ss_pred cHHHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhc----CCCeEEEeeeeeeecCCCChHHHHHhhhhhhhhhhh
Q 011596 299 NLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKD----NEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVE 374 (482)
Q Consensus 299 aln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~----~p~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ 374 (482)
++|.|++ .+++||++|+|+|+.++|++|++++..+++ +|++++++............. ..............
T Consensus 65 a~N~Gi~---~A~g~yl~fln~D~~~~~~~l~~l~~~~~~~~~~~~~vg~vg~~~~~~~~~g~~~-~~~~~~~~~~~~~~ 140 (249)
T 2nxv_A 65 WHKQMLP---RCKGRYVIFCHEDVELVDRGYDDLVAAIEALEEADPKWLVAGVAGSPWRPLNHSV-TAQALHISDVFGND 140 (249)
T ss_dssp HHHHHGG---GCCSSEEEEEETTEECSSCCHHHHHHHHHHHHHHCTTEEEEESEEEESSCSCTTS-CCCEEEEEETTEEE
T ss_pred HHHHHHH---hcCCCEEEEECCCcccCccHHHHHHHHHHhcccCCCCeeEEeecccccCCCCcee-eecccccCCccccc
Confidence 8999999 689999999999999999999999999986 499988865432222111000 00000000000000
Q ss_pred hhhccccccccccccceEeeeHHHHHHcCCCCCC---CchhHHHHHHHHHHCCCcEEEeccceecccC
Q 011596 375 QQVNGVFINFFGFNGTAGVWRIKALEDSGGWMER---TTVEDMDIAVRAHLRGWKFIFLNDVECQCEL 439 (482)
Q Consensus 375 ~~~~~~~~~~~~~~G~~~~~Rr~~l~~iGgf~~~---~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~ 439 (482)
.........+..+.|+++++||++ .|||++. ...||.|+++|+.++|+++.+.|.. ++|..
T Consensus 141 ~~~~~~~~~v~~~~g~~~~~rr~~---~~gFDe~~~~~~~~D~Dl~~R~~~~G~~~~~~p~~-v~H~~ 204 (249)
T 2nxv_A 141 RRRGNVPCRVESLDECFLLMRRLK---PVLNSYDMQGFHYYGADLCLQAEFLGGRAYAIDFH-LHHYG 204 (249)
T ss_dssp EEESCSSEEEEEECTTEEEEETTB---CCCCCSSCCSSSSHHHHHHHHHHHTTCEEEECCCC-CEECC
T ss_pred cccCCCceEcCeeeeEeeEEEHhh---hCCCCCCCCCcceehhHHHHHHHHcCCeEEEeccE-EEECC
Confidence 000011112233579999999999 6889874 2358999999999999999999865 44443
|
| >2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ... | Back alignment and structure |
|---|
Probab=99.75 E-value=6.5e-19 Score=172.48 Aligned_cols=178 Identities=16% Similarity=0.164 Sum_probs=126.3
Q ss_pred CCCeEEEEeecCCchHHHHHHHHHHH---hCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCC
Q 011596 219 FFPMVLVQIPMCNEKEVYQQSIAAVC---NLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGY 295 (482)
Q Consensus 219 ~~P~VsViIP~yne~~~l~~tL~Sll---~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~ 295 (482)
..|+||||||+||+++.|.++|+|+. +|+|++ ++|+|+||++|+. - +
T Consensus 63 ~~~~VSIIIP~yN~~~~L~~~L~sl~~~l~q~~~~--~EIiVVdds~d~~---------------------------f-~ 112 (287)
T 2fy7_A 63 SPHKVAIIIPFRNRQEHLKYWLYYLHPVLQRQQLD--YGIYVINQAGDTI---------------------------F-N 112 (287)
T ss_dssp CSCEEEEEEEESSCHHHHHHHHHHHHHHHHHTTCE--EEEEEEEECSSSC---------------------------C-C
T ss_pred cCCcEEEEEeeCCCHHHHHHHHHHHHHHHHHhcCC--ceEEEEEeCCCCc---------------------------c-c
Confidence 36899999999999999999999999 688875 7899999965421 0 2
Q ss_pred ccccHHHHh----hhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHHHHhhhhhhhh
Q 011596 296 KAGNLKSAM----NCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHF 371 (482)
Q Consensus 296 Ka~aln~al----~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~ 371 (482)
++.++|.|+ + .+++|||+|+|+|+++.|++.... ....|.. .. ..... .. +
T Consensus 113 ~a~a~N~G~~~al~---~A~gd~i~flD~D~i~~~d~~~~~---~~~~p~~---------~~---~~~~~---~~----~ 167 (287)
T 2fy7_A 113 RAKLLNVGFQEALK---DYDYTCFVFSDVDLIPMNDHNAYR---CFSQPRH---------IS---VAMDK---FG----F 167 (287)
T ss_dssp HHHHHHHHHHHHHH---HSCCCEEEEECTTEEESBTTSCCS---CCSSCEE---------CC---CEEGG---GT----T
T ss_pred hhhhhhhHHHHHHH---hCCCCEEEEECCCcccCCCcceEe---cCCCCce---------EE---Eeecc---cc----c
Confidence 567788888 5 689999999999999999962100 0011110 00 00000 00 0
Q ss_pred hhhhhhccccccccccccceEeeeHHHHHHcCCCCCCCc---hhHHHHHHHHHHCCCcEEEec-----cceecc------
Q 011596 372 EVEQQVNGVFINFFGFNGTAGVWRIKALEDSGGWMERTT---VEDMDIAVRAHLRGWKFIFLN-----DVECQC------ 437 (482)
Q Consensus 372 ~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~iGgf~~~~~---~ED~~l~~rl~~~G~ki~~~~-----~~~~~~------ 437 (482)
. .....+.|+++++||++++++|||++... .||.|++.|+..+|+++...+ ....+|
T Consensus 168 ~---------~~~~~~~G~~~~~rr~~f~~vgGFde~~~g~g~ED~Dl~~Rl~~~G~~i~~~~~~~~~~~~i~H~~~~~~ 238 (287)
T 2fy7_A 168 S---------LPYVQYFGGVSALSKQQFLTINGFPNNYWGWGGEDDDIFNRLVFRGMSISRPNAVVGTTRHIRHSRDKKN 238 (287)
T ss_dssp S---------CSSTTCCCSEEEEEHHHHHHTTSCCSCCSSCSCHHHHHHHHHHHTTCCCBCCCTTTCEEEECC-------
T ss_pred C---------CCcCceeeeEEEEEHHHHHHcCCCCccccccccchHHHHHHHHHcCCeEEecCcccceeEEEecCCCccc
Confidence 0 01123578999999999999999998744 499999999999999998443 333322
Q ss_pred -cCCcCHHHHHHHHHhhhhhhHHH
Q 011596 438 -ELPESYEAYRKQQHRWHSGPMQL 460 (482)
Q Consensus 438 -~~p~t~~~~~~qr~RW~~G~~q~ 460 (482)
..|+.++...+|+.||+.+.+..
T Consensus 239 ~~n~~~~~~l~~~~~~~~~~Gl~~ 262 (287)
T 2fy7_A 239 EPNPQRFDRIAHTKETMLSDGLNS 262 (287)
T ss_dssp --CCCCCCCHHHHHHHTTTSSGGG
T ss_pred CCCHHHHHHHhhcccEEcCCCccc
Confidence 24667788889999999886654
|
| >2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=1.2e-14 Score=147.93 Aligned_cols=198 Identities=12% Similarity=0.060 Sum_probs=127.5
Q ss_pred EEEeecCCchHHHHHHHHHHHh-CCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhh-hCCCeEEEEecc--C-CCCCccc
Q 011596 224 LVQIPMCNEKEVYQQSIAAVCN-LDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQ-EAGANIVYRHRI--L-RDGYKAG 298 (482)
Q Consensus 224 sViIP~yne~~~l~~tL~Sll~-q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~-~~~v~vv~~~~~--~-~~g~Ka~ 298 (482)
.||||++|| .+..+++++.. +.+|. +||+||||||+|.|.++++++.++.+ ..+++++..... . .+.||+.
T Consensus 3 lVIiP~~eE--~I~~vl~~l~~~~~~~~--~EIIVVDDGStD~T~eia~~la~~~~~~~g~~vi~~~~~r~~~~n~GkG~ 78 (397)
T 2bo4_A 3 LVVFPFKHE--HPEVLLHNVRVAAAHPR--VHEVLCIGYERDQTYEAVERAAPEISRATGTPVSVRLQERLGTLRPGKGD 78 (397)
T ss_dssp EEEEECCSS--CHHHHHHHHHHHHHSTT--CCEEEEEESSCCHHHHHHHHHHHHHHHHHSCCEEEEECCCCSSSSSSHHH
T ss_pred EEEEeCCcc--CHHHHHHHHHHhccCCC--eEEEEEECcCCccHHHHHHHhhhhcccccCCeEEEEecccCCCCCCCHHH
Confidence 355665543 47777777652 33454 67999999999999999998777665 557776543212 2 0345999
Q ss_pred cHHHHhhhcc-cCCceEEEEEcCCCC-CChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHHHH-hhhhhhhhhhhh
Q 011596 299 NLKSAMNCSY-VKDYEFVAIFDADFQ-PNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQ-DINLSFHFEVEQ 375 (482)
Q Consensus 299 aln~al~~~~-~a~~d~Vl~lDaD~~-~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~~~-~~~~~~~~~~~~ 375 (482)
|++.|++.+. .+++|+|+++|||.+ .+|+++.+++..+.+ +.++|.|... .....+...+.. .......+....
T Consensus 79 Al~~G~~~Al~~a~gd~vv~mDADlq~~~P~~i~~Ll~~l~~--g~D~V~g~~~-r~~~~~~~~~~~~~~ll~~~~~~~~ 155 (397)
T 2bo4_A 79 GMNTALRYFLEETQWERIHFYDADITSFGPDWITKAEEAADF--GYGLVRHYFP-RASTDAMITWMITRTGFALLWPHTE 155 (397)
T ss_dssp HHHHHHHHHHHHCCCSEEEECCTTCSSCCHHHHHHHHHHHHT--TCSEEEEECC-CCTTSCHHHHHTHHHHHHHHCTTSS
T ss_pred HHHHHHHHHHHhCCCCEEEEEcCCCCCCCHHHHHHHHHHHHc--CCCEEEEEec-cccCCcHHHHHHHHHHHHHHHHHhh
Confidence 9999993332 689999999999996 899999999998863 4677777422 112223222211 110110111111
Q ss_pred hhccccccccccccceEeeeHHHHHHcCCC----CCCCchhHHHHHHHHHHCCCcEEEeccc
Q 011596 376 QVNGVFINFFGFNGTAGVWRIKALEDSGGW----MERTTVEDMDIAVRAHLRGWKFIFLNDV 433 (482)
Q Consensus 376 ~~~~~~~~~~~~~G~~~~~Rr~~l~~iGgf----~~~~~~ED~~l~~rl~~~G~ki~~~~~~ 433 (482)
.. .+.-..+...++||++++++... .....+.|.++..++.++|+++..+|-.
T Consensus 156 ~~-----~i~dp~sG~~a~~R~vl~~l~~~~~~~~~~~fg~eiel~~~a~~~G~rI~EVpig 212 (397)
T 2bo4_A 156 LS-----WIEQPLGGELLMRREVAAMLYEDERVRRRSDWGIDTLYTFVTVQQGVSIYECYIP 212 (397)
T ss_dssp GG-----GCSCTTCCCEEEEHHHHHHHHHCHHHHTCCSTTHHHHHHHHHHHTTCCEEEEECT
T ss_pred cc-----ccccCCcccEEEeHHHHHHHhhhcccCcCCCcchHHHHHHHHHHcCCEEEEEECc
Confidence 00 11111344558999999987321 2334568999999999999999988743
|
| >2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A* | Back alignment and structure |
|---|
Probab=99.12 E-value=2.5e-10 Score=111.68 Aligned_cols=104 Identities=21% Similarity=0.119 Sum_probs=74.4
Q ss_pred CCeEEEEeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHH---HHHHHHHHHhhhCCCeEEEEeccC-----
Q 011596 220 FPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQ---TLIKEEVLKWQEAGANIVYRHRIL----- 291 (482)
Q Consensus 220 ~P~VsViIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~---~~~~~~~~~~~~~~v~vv~~~~~~----- 291 (482)
..++|||||||||+.. +++++++|.+.+ ++||+|||||.|.+. ++++++... .+.++.++ +..+
T Consensus 52 ~~klSIVVPvYNEe~~---lLesVl~qi~~d--~eIIlVdDGS~D~s~~e~dil~~~~~~-~~~ri~vi--HQkn~gls~ 123 (391)
T 2wvl_A 52 LEQTAIVVPTRNERLK---LLEGVLSGIPHE--ALILVASNSSPDRFQMERDLLEEFAHL-TERPALIF--HQKDPALAE 123 (391)
T ss_dssp HTTEEEEEEESSCCHH---HHHHHHHTSCTT--SEEEEEECCCHHHHHHHHHHHHHHHHH-TTCCEEEE--ETTCHHHHH
T ss_pred HhceEEEEeccCcHHH---HHHHHHhcCCCC--ceEEEEECCCCCChHhHHHHHHHHHhh-cccceEEE--eccChHHHH
Confidence 4679999999999974 699999998765 789999999999984 455555431 12334333 3211
Q ss_pred ----------------CCCCccccHHHHhhhcccCCceEEEEEcCCCCCChHHHHH
Q 011596 292 ----------------RDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRR 331 (482)
Q Consensus 292 ----------------~~g~Ka~aln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~ 331 (482)
.+.||+.++-.|+..+..++++||.|+|||..++.+..+.
T Consensus 124 Ar~~~G~~~il~~~~~vR~GKGegmi~Gi~~Ak~~~geYVgFvDADdyi~~~v~Ey 179 (391)
T 2wvl_A 124 ALRAGGYPHPIGEDGLVRSGKAEGMILALVFAALSGRRYVGFIDADNYFPGAVWEY 179 (391)
T ss_dssp HHHHTTCCTTBCTTSSBCCSHHHHHHHHHHHHHHTTCSEEEECCSCBSCHHHHHHH
T ss_pred HHHhcCcchhhcccccccccchHHHHHHHHHHHhcCCCEEEEEcCcCCCccCHHHH
Confidence 1124888888888843234899999999999997655443
|
| >1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A* | Back alignment and structure |
|---|
Probab=98.91 E-value=3.8e-09 Score=105.14 Aligned_cols=119 Identities=15% Similarity=0.227 Sum_probs=83.8
Q ss_pred CeEEEEeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEe-------ccCCC
Q 011596 221 PMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRH-------RILRD 293 (482)
Q Consensus 221 P~VsViIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~-------~~~~~ 293 (482)
+.++|+|++||.++ ++++|+|+++|..+....+|+|.||++.+++.++++++. ..+..+... ++.+.
T Consensus 2 ~~~pViI~~yNRp~-l~~~L~sL~~~~p~~~~~~iivsdDgs~~~~~~vi~~~~-----~~I~~~~~~d~~~~~~~~~N~ 75 (343)
T 1fo8_A 2 AVIPILVIACDRST-VRRCLDKLLHYRPSAELFPIIVSQDCGHEETAQVIASYG-----SAVTHIRQPDLSNIAVQPDHR 75 (343)
T ss_dssp CCCCEEEEESSCTT-HHHHHHHHHHHCSCTTTSCEEEEECTTCHHHHHHHHTTG-----GGSEEEECSCCCCCCCCTTCG
T ss_pred CcccEEEEECCcHH-HHHHHHHHHhcCCCcCCcEEEEEECCCCHHHHHHHHHcC-----CceEEEEcCCccccccchhhc
Confidence 45789999999999 999999999998655567799999999999888776431 123322110 11111
Q ss_pred CCc-----c----ccHHHHhhhcccCCceEEEEEcCCCCCChHHHHH---HHHHhhcCCCeEEEeee
Q 011596 294 GYK-----A----GNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRR---TVPHFKDNEELGLVQAR 348 (482)
Q Consensus 294 g~K-----a----~aln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~---lv~~f~~~p~v~~V~~~ 348 (482)
|.+ + .++|.++. ..++|+++++|+|+.+.||+++- ++..++.|+.+.++++.
T Consensus 76 g~~~y~~ia~h~~~al~~vf~---~~~~~~vIiLEDDl~~spdF~~y~~~~l~~y~~D~~I~~ISa~ 139 (343)
T 1fo8_A 76 KFQGYYKIARHYRWALGQIFH---NFNYPAAVVVEDDLEVAPDFFEYFQATYPLLKADPSLWCVSAW 139 (343)
T ss_dssp GGHHHHHHHHHHHHHHHHHHT---TSCCSEEEEEETTEEECTTHHHHHHHHHHHHHHCTTEEEEESC
T ss_pred CcccchhHhHHHHHHHHHHHH---hccCCEEEEEcCCCeECHHHHHHHHHHHHHhhcCCcEEEEecc
Confidence 110 0 23444444 45799999999999999999854 45555678999888764
|
| >2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A* | Back alignment and structure |
|---|
Probab=98.85 E-value=4.2e-09 Score=105.78 Aligned_cols=109 Identities=20% Similarity=0.211 Sum_probs=70.7
Q ss_pred CeEEEEeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHH------HHHHHHHHHHhhhCCCeEEEEec-----
Q 011596 221 PMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTA------QTLIKEEVLKWQEAGANIVYRHR----- 289 (482)
Q Consensus 221 P~VsViIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t------~~~~~~~~~~~~~~~v~vv~~~~----- 289 (482)
.++|||||+|||++.+ +..++++- |. ..+||||||+|.|.+ .++++++.... +.+..++....
T Consensus 51 ~~iSVVIP~yNEE~~l---I~~vL~~i-~~-~~eIIvVDDgSrD~tD~~~~~~~~l~~~~~~~-~~~~~Vl~~~~p~v~~ 124 (394)
T 2zu9_A 51 GKMAVIVPMKNEKLHL---VDGVLKAI-PH-KCPIIIVSNSKREGPNRYKLEVDLIRHFYNLT-HSKIIMIHQKDPGLAK 124 (394)
T ss_dssp TTEEEEEEESSCCHHH---HHHHHHHS-CT-TSCEEEEECCCCSSSCHHHHHHHHHHHHHHHH-CCCEEEEETTCHHHHH
T ss_pred CCEEEEEecCcccHHH---HHHHHHcC-CC-CcEEEEEECcCcccccchhhHHHHHHHHhhcc-ccceEEEecCCcchhH
Confidence 4699999999999654 44444422 22 256899999984444 44555443322 23343333222
Q ss_pred ---------------cCCCCCccccHHHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhh
Q 011596 290 ---------------ILRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFK 337 (482)
Q Consensus 290 ---------------~~~~g~Ka~aln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~ 337 (482)
..++ ||+.|+..|+..+...++|+|+++|||. ..|..+.+++..+.
T Consensus 125 ~~~~~g~~~il~~~~~~r~-GKG~Am~aGl~~A~~~~gd~Vv~~DaDl-~iP~~v~~~~kgy~ 185 (394)
T 2zu9_A 125 AFKEVGYTDILDENGMIRS-GKGEGMLVGLLLAKAIGAEYVGFVDADN-YIPGAVNEYVKDYA 185 (394)
T ss_dssp HHHHHTCCTTBCTTSSBCC-SHHHHHHHHHHHHHHTTCSEEEECCSCB-SCHHHHHHHHHHHH
T ss_pred HhhhccccccccccccccC-ChHHHHHHHHHHHhhCCCCEEEEEeCCC-CCHHHHHHHHHHhh
Confidence 1134 5999999999842111899999999999 67888877777664
|
| >3lw6_A FI08434P, beta-4-galactosyltransferase 7; protein-Mn-UDP complex, glycosyltransferase; HET: UDP; 1.81A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00061 Score=64.71 Aligned_cols=178 Identities=15% Similarity=0.196 Sum_probs=110.0
Q ss_pred CCeEEEEeecCCchHHHHHHHHHHH----hCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCC
Q 011596 220 FPMVLVQIPMCNEKEVYQQSIAAVC----NLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGY 295 (482)
Q Consensus 220 ~P~VsViIP~yne~~~l~~tL~Sll----~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~ 295 (482)
.-+|.||||-+|.++.|...|.-+. +|.. .+.|+|++...+. +-|
T Consensus 50 ~~kvAIIIPyRdR~~hL~~fl~~lhp~L~rQ~l---~y~I~VieQ~~~~-------------------------~FN--- 98 (287)
T 3lw6_A 50 VHKMALLVPFRDRFEELLQFVPHMTAFLKRQGV---AHHIFVLNQVDRF-------------------------RFN--- 98 (287)
T ss_dssp CCEEEEEEEESSCHHHHHHHHHHHHHHHHHTTC---EEEEEEEEECSSS-------------------------CCC---
T ss_pred cceEEEEEEeCCHHHHHHHHHHHHHHHHHHcCC---ceEEEEEecCCCC-------------------------ccc---
Confidence 4589999999999988877776543 4532 4567777753221 111
Q ss_pred ccccHHHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHHHHhhhhhhhhhhhh
Q 011596 296 KAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQ 375 (482)
Q Consensus 296 Ka~aln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ 375 (482)
++.-+|.|+..+ ....|+++|-|.|.++..|... .. .|+. ..+.. ...+ .+ ++
T Consensus 99 Ra~LlNvGf~ea-~~~~d~~ifHDVDLlP~dd~n~-----Y~-c~~~---~~P~H-ls~~--------~~----~~---- 151 (287)
T 3lw6_A 99 RASLINVGFQFA-SDVYDYIAMHDVDLLPLNDNLL-----YE-YPSS---LGPLH-IAGP--------KL----HP---- 151 (287)
T ss_dssp HHHHHHHHHHHS-CTTCCEEEEECTTEEECCTTSC-----CC-CCCT---TCCEE-SSCT--------TT----CS----
T ss_pred hhheecccHHHH-hccCCEEEEecccccccCCCcc-----cc-CCCC---CCceE-Eeec--------cc----cC----
Confidence 556678888753 3458999999999988643211 00 1110 01111 1000 00 00
Q ss_pred hhccccccccccccceEeeeHHHHHHcCCCCCCCc---hhHHHHHHHHHHCCCcEEEeccc-e-----ec--c-------
Q 011596 376 QVNGVFINFFGFNGTAGVWRIKALEDSGGWMERTT---VEDMDIAVRAHLRGWKFIFLNDV-E-----CQ--C------- 437 (482)
Q Consensus 376 ~~~~~~~~~~~~~G~~~~~Rr~~l~~iGgf~~~~~---~ED~~l~~rl~~~G~ki~~~~~~-~-----~~--~------- 437 (482)
.....++.|..++++++.+.++|||++... .||.|+..|+..+|+++.-.+.. . .. +
T Consensus 152 -----~~~Y~~~~GGv~a~~re~f~kVNGFsn~f~GWGgEDdD~~~Rl~~~G~~i~Rp~~~~~gry~m~~H~hd~~~r~r 226 (287)
T 3lw6_A 152 -----KYHYDNFVGGILLVRREHFKQMNGMSNQYWGWGLEDDEFFVRIRDAGLQVTRPQNIKTGTNDTFSHIHNRYHRKR 226 (287)
T ss_dssp -----SCCCTTCCCSEEEEEHHHHHHTTSCCSCCCSSSSHHHHHHHHHHHTTCCCBCCSSCCCCTTTSEEECCCTTTSCC
T ss_pred -----CCCcCCccccEEeccHHHHHHcCCCCCcCcCCCccchHHHHHHHHcCCcEEcCCCccccceeEEeccccccccCC
Confidence 012233679999999999999999988744 69999999999999998765532 1 11 1
Q ss_pred cCCcCHHHHHHHHHhhhhhhHHH
Q 011596 438 ELPESYEAYRKQQHRWHSGPMQL 460 (482)
Q Consensus 438 ~~p~t~~~~~~qr~RW~~G~~q~ 460 (482)
..+..+.....+++||....+..
T Consensus 227 d~~k~~~~~~~~~~r~~~dGLns 249 (287)
T 3lw6_A 227 DTQKCFNQKEMTRKRDHKTGLDN 249 (287)
T ss_dssp CCCCCTTHHHHHTSCCSSCSGGG
T ss_pred cccchhhhhhhhcEEccCCCCee
Confidence 11233455566777887665544
|
| >2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus} | Back alignment and structure |
|---|
Probab=96.74 E-value=0.0027 Score=56.89 Aligned_cols=103 Identities=14% Similarity=0.123 Sum_probs=64.1
Q ss_pred cCCceEEEEEcCC---CCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHHHHhhhhhhhhhhhhhhcccccccc
Q 011596 309 VKDYEFVAIFDAD---FQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQQVNGVFINFF 385 (482)
Q Consensus 309 ~a~~d~Vl~lDaD---~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (482)
..++|+++++||| ...+|+.+.+++ + .+.++|.|.......+ . .+...+ .+. . ... ...+.
T Consensus 51 ~~~~dhllfIDAD~~~I~FdPe~V~rLl---~--~g~DVV~GsYp~K~~~-~-~s~~a~-~y~----~--~i~--~~~V~ 114 (203)
T 2c0n_A 51 MKDYDTLAFLDEDVVPIEIDFQKVEAKF---N--EGYDVVCGYYYLKTLR-G-YSVYRK-DWE----K--EIF--DGEVN 114 (203)
T ss_dssp CTTCCEEEEECTTEEEEECCHHHHHHHH---H--HTCSEEEEECBCTTSS-S-BSEESS-SBC----S--SCC--CEECS
T ss_pred cCCCCEEEEEeCCCCccccCHHHHHHHH---h--CCCCEEEEEeeccCCC-c-cchHHH-HHH----H--hcc--Cceee
Confidence 4678999999999 999999999999 2 2445777764333221 1 000000 000 0 000 01233
Q ss_pred ccccceEeeeHHHHHHcC--CC-------CCCCchhHHHHHHHHHHCCCcE
Q 011596 386 GFNGTAGVWRIKALEDSG--GW-------MERTTVEDMDIAVRAHLRGWKF 427 (482)
Q Consensus 386 ~~~G~~~~~Rr~~l~~iG--gf-------~~~~~~ED~~l~~rl~~~G~ki 427 (482)
.+.+..++++|++++.+- .| ....++||..+...+..+|+.+
T Consensus 115 d~~tGF~lIkR~V~e~L~~p~fl~~~~~e~~~~~gEdv~F~~~~k~~~~~~ 165 (203)
T 2c0n_A 115 GCGLGFTFIKREFLEKIKRPAFLAFKPIESPHWIGEDVYFFSTHKPRTYAL 165 (203)
T ss_dssp EECSSEEEEEHHHHTTSCSSCCCC---------CCHHHHHHHHHCCCEEEE
T ss_pred eccccEEEEhHHHHHHHhhhhhhcCChhhhccccCCceEEEeccccccccc
Confidence 356677889999999983 33 2235789999999999888876
|
| >3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0 | Back alignment and structure |
|---|
Probab=95.94 E-value=0.024 Score=53.78 Aligned_cols=183 Identities=13% Similarity=0.142 Sum_probs=93.6
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHhhhcccCCce
Q 011596 234 EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKDYE 313 (482)
Q Consensus 234 ~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al~~~~~a~~d 313 (482)
..+..+++.+.+... ++ |+|+-| ++...+.++ ..++++++.......| ..+ +..+++.....+.|
T Consensus 35 Pli~~~l~~l~~~~i--~~--VvVvt~--~~~i~~~~~-------~~g~~v~~~~~~~~~G-t~~-i~~a~~~l~~~~~d 99 (256)
T 3tqd_A 35 PMIQHVYESAIKSGA--EE--VVIATD--DKRIRQVAE-------DFGAVVCMTSSDHQSG-TER-IAEAAVALGFEDDE 99 (256)
T ss_dssp EHHHHHHHHHHHTTC--SE--EEEEES--CHHHHHHHH-------HTTCEEEECCTTCCSH-HHH-HHHHHHHTTCCTTC
T ss_pred hHHHHHHHHHHhCCC--CE--EEEECC--HHHHHHHHH-------HcCCeEEEeCCCCCCc-HHH-HHHHHHHhCcCCCC
Confidence 478888888887542 23 334333 344444333 4577777643223333 433 56666632113679
Q ss_pred EEEEEcCCC-CCChHHHHHHHHHhhcCCCeEEEeeeeeeec----CCCChHHHHH-hhhhhhhhhh-----hhhhc----
Q 011596 314 FVAIFDADF-QPNPDFLRRTVPHFKDNEELGLVQARWSFVN----KDENLLTRLQ-DINLSFHFEV-----EQQVN---- 378 (482)
Q Consensus 314 ~Vl~lDaD~-~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n----~~~~~~~~~~-~~~~~~~~~~-----~~~~~---- 378 (482)
+++++++|. .++++.+.+++..+.++++.++++......+ .+.+...-.. .-....++.. .+...
T Consensus 100 ~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~a~l~~~v~~~~~~~~p~~vkvv~d~~g~~l~fsr~pip~~r~~~~~~~ 179 (256)
T 3tqd_A 100 IIVCLQGDEPLIPPDAIRKLAEDLDEHDNVKVASLCTPITEVDELFNPHSTKVVLNRRNYALYFSHAPIPWGRDTFSDKE 179 (256)
T ss_dssp EEEEECTTCCCCCHHHHHHHHHHHHHCC--CEEEEEEECCCHHHHTCTTSCEEEECTTSBEEEEESSCSSCCTTTTTCGG
T ss_pred EEEEEeCCcccCCHHHHHHHHHHHHhCCCCCEEEEeeEcCCHHHhhCCCccEEEECCCCEEeEEecCCCCCCCccccccc
Confidence 999999999 6789999999999976554333322211110 0011000000 0000000000 00000
Q ss_pred ccc-ccccccccceEeeeHHHHHHcCCCCCCCchhHHH--HHHHHHHCCCcEEEecc
Q 011596 379 GVF-INFFGFNGTAGVWRIKALEDSGGWMERTTVEDMD--IAVRAHLRGWKFIFLND 432 (482)
Q Consensus 379 ~~~-~~~~~~~G~~~~~Rr~~l~~iGgf~~~~~~ED~~--l~~rl~~~G~ki~~~~~ 432 (482)
... ......+....+||+++++....+.+. .-|..+ -.+|+..+|+++....-
T Consensus 180 ~~~~~~~~~~~~GiY~y~~~~l~~~~~l~~s-~lE~~e~leqlr~le~G~~i~~~~~ 235 (256)
T 3tqd_A 180 NLQLNGSHYRHVGIYAYRVGFLEEYLSWDAC-PAEKMEALEQLRILWHGGRIHMVVA 235 (256)
T ss_dssp GCCCSSCCEEEEEEEEEEHHHHHHHHHSCCC-HHHHHHTCTTHHHHHTTCCCEEEEC
T ss_pred ccccCCcceEEEEEEEcCHHHHHHHHhCCCC-cccchhhhHHHHHHHCCCeEEEEEe
Confidence 000 001113566789999999997655443 233322 23577889999987653
|
| >4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A | Back alignment and structure |
|---|
Probab=95.62 E-value=0.047 Score=51.57 Aligned_cols=183 Identities=9% Similarity=0.068 Sum_probs=92.6
Q ss_pred hHHHHHHH-HHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHhhhcccCC
Q 011596 233 KEVYQQSI-AAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKD 311 (482)
Q Consensus 233 ~~~l~~tL-~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al~~~~~a~ 311 (482)
...+..++ +.+.+.. -+++ |+++| ++...+.++ ..++++++.......| . +.+..+++.....+
T Consensus 26 kPli~~~i~~~~~~~~--~~~v-vVvt~---~~~i~~~~~-------~~g~~v~~~~~~~~~G-t-~~i~~a~~~~~~~~ 90 (253)
T 4fcu_A 26 RPMILRVVDQAKKVEG--FDDL-CVATD---DERIAEICR-------AEGVDVVLTSADHPSG-T-DRLSEVARIKGWDA 90 (253)
T ss_dssp EEHHHHHHHHHHTCTT--CCEE-EEEES---CHHHHHHHH-------TTTCCEEECCTTCCCH-H-HHHHHHHHHHTCCT
T ss_pred eEhHHHHHHHHHHhcC--CCEE-EEECC---HHHHHHHHH-------HcCCeEEEeCCCCCCh-H-HHHHHHHHhcCcCC
Confidence 35888888 8877643 2343 33443 244433332 4567776542222233 2 34666666421125
Q ss_pred ceEEEEEcCCC-CCChHHHHHHHHHhhcCCCeEE--Eeeeee----eecCCC-ChHH--HHHhhhhhhh-hhhhhhhccc
Q 011596 312 YEFVAIFDADF-QPNPDFLRRTVPHFKDNEELGL--VQARWS----FVNKDE-NLLT--RLQDINLSFH-FEVEQQVNGV 380 (482)
Q Consensus 312 ~d~Vl~lDaD~-~~~pd~L~~lv~~f~~~p~v~~--V~~~~~----~~n~~~-~~~~--~~~~~~~~~~-~~~~~~~~~~ 380 (482)
.|+++++++|. .++++.+.+++..+.++++..+ +..+.. ..++.. .... ......+... ....+.....
T Consensus 91 ~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~at~~~~~~~~~~~~~p~~~kvv~d~~g~~l~fsr~~ip~~r~~~~~ 170 (253)
T 4fcu_A 91 DDIIVNVQGDEPLLPAQLVQQVAKLLVDKPNCSMSTLCEPIHALDEFQRDSIVKVVMSKQNEALYFSRATIPYDRDGAKR 170 (253)
T ss_dssp TCEEEECCTTCTTCCHHHHHHHHHHHHHCTTCSEEEEEEECCCHHHHHCTTSCEEEECTTSBEEEEESSCCSCCTTTSSS
T ss_pred CCEEEEEeCCcccCCHHHHHHHHHHHHhCCCCCEEEEeEEcCCHHHccCCCccEEEECCCCeEEEecCCCCCCCCCcccc
Confidence 69999999999 6789999999999976654332 222210 111111 0000 0000000000 0000000000
Q ss_pred ---c-ccccccccceEeeeHHHHHHcCCCCCCCchhH--HHHHHHHHHCCCcEEEec
Q 011596 381 ---F-INFFGFNGTAGVWRIKALEDSGGWMERTTVED--MDIAVRAHLRGWKFIFLN 431 (482)
Q Consensus 381 ---~-~~~~~~~G~~~~~Rr~~l~~iGgf~~~~~~ED--~~l~~rl~~~G~ki~~~~ 431 (482)
. ....-.+....+||++.+++.....+. --|- ..-.+|+..+|+++....
T Consensus 171 ~~~~~~~~~~~~~GiY~f~~~~l~~~~~~~~~-~le~~e~le~lr~l~~G~~I~~~~ 226 (253)
T 4fcu_A 171 DEPTLHTQAFRHLGLYAYRVSLLQEYVTWEMG-KLEKLESLEQLRVLENGHRIAIAV 226 (253)
T ss_dssp SSCCCCSCCEEEEEEEEEEHHHHHHHTTSCCC-HHHHHHTCTTHHHHHTTCCEEEEE
T ss_pred cccccccceeEEEEEEEeCHHHHHHHHhCCCC-cccchhHHHHHHHHHCCCceEEEE
Confidence 0 011113666789999999998765443 2222 222346678999987654
|
| >1v84_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 1; glycoprotein, glycocyltransferase, HNK-1 epitop; HET: GAL NDG NAG TLA UDP; 1.82A {Homo sapiens} SCOP: c.68.1.7 PDB: 1v83_A* 1v82_A* | Back alignment and structure |
|---|
Probab=95.33 E-value=0.073 Score=49.77 Aligned_cols=103 Identities=15% Similarity=0.148 Sum_probs=67.3
Q ss_pred CCeEEEEeecCCch---HHHHHHHHHHHhCCCCCCceEEEEEcCCC--CHHHHHHHHHHHHHhhhCCCeEEEEeccCC--
Q 011596 220 FPMVLVQIPMCNEK---EVYQQSIAAVCNLDWPKSKILIQVLDDSD--DPTAQTLIKEEVLKWQEAGANIVYRHRILR-- 292 (482)
Q Consensus 220 ~P~VsViIP~yne~---~~l~~tL~Sll~q~yp~~~~~IiVvDdss--dd~t~~~~~~~~~~~~~~~v~vv~~~~~~~-- 292 (482)
+|.+-||.|+|... ..|.+.-..+ .+ -|+ +.-|||+|+. ++.+.++++ ..|+...+..-..+
T Consensus 2 ~p~I~vVTPTy~R~~Q~a~LtRLa~TL-~~-Vp~--L~WIVVEd~~~~t~~va~lL~-------~sgl~y~HL~~~~p~~ 70 (253)
T 1v84_A 2 LPTIHVVTPTYSRPVQKAELTRMANTL-LH-VPN--LHWLVVEDAPRRTPLTARLLR-------DTGLNYTHLHVETPRN 70 (253)
T ss_dssp CCEEEEEEEECCSTTHHHHHHHHHHHH-TT-SSS--EEEEEEESSSSCCHHHHHHHH-------HHCCEEEEEECCCCHH
T ss_pred CCEEEEEeCCCCccchhHHHHHHhhhh-cc-CCc--eEEEEEeCCCCCCHHHHHHHH-------HcCCceEEeecCCCcc
Confidence 68999999999997 3333333333 22 354 6677899854 677777776 56777666543311
Q ss_pred ---------CCC--ccccHHHHhhhccc------CCceEEEEEcCCCCCChHHHHHHH
Q 011596 293 ---------DGY--KAGNLKSAMNCSYV------KDYEFVAIFDADFQPNPDFLRRTV 333 (482)
Q Consensus 293 ---------~g~--Ka~aln~al~~~~~------a~~d~Vl~lDaD~~~~pd~L~~lv 333 (482)
... -..+.|.|++.+.. ...-+|.|.|+|...+-+..++|-
T Consensus 71 ~~~~~~~~~~~~~rg~~qRn~AL~~Ir~~~~~~~~~~GVVyFADDdNtYdl~LF~emR 128 (253)
T 1v84_A 71 YKLRGDARDPRIPRGTMQRNLALRWLRETFPRNSSQPGVVYFADDDNTYSLELFEEMR 128 (253)
T ss_dssp HHCC-------CCTTHHHHHHHHHHHHHHSCSSSCCCEEEEECCTTSEECHHHHHHHH
T ss_pred ccccccccCccccchHHHHHHHHHHHHHhcccccccceeEEEecCCCcccHHHHHHHh
Confidence 010 12368888886521 235799999999999988877744
|
| >3cu0_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 3; glcat-I, glycosyltransferase, heparan sulfate biosynthesis, glycoprotein; HET: GAL UDP; 1.90A {Homo sapiens} SCOP: c.68.1.7 PDB: 1kws_A* 1fgg_A* | Back alignment and structure |
|---|
Probab=95.30 E-value=0.16 Score=47.93 Aligned_cols=103 Identities=13% Similarity=0.130 Sum_probs=65.3
Q ss_pred CCCeEEEEeecCCchH---HHHHHHHHHHhCCCCCCceEEEEEcCC--CCHHHHHHHHHHHHHhhhCCCeEEEEeccCCC
Q 011596 219 FFPMVLVQIPMCNEKE---VYQQSIAAVCNLDWPKSKILIQVLDDS--DDPTAQTLIKEEVLKWQEAGANIVYRHRILRD 293 (482)
Q Consensus 219 ~~P~VsViIP~yne~~---~l~~tL~Sll~q~yp~~~~~IiVvDds--sdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~ 293 (482)
..|.|-||.|+|.... .|.+.-..+ .+ .|+ +.-|||+|+ ..+.+.++++ ..|+...+..-..+.
T Consensus 19 ~~p~IivVTPTy~R~~Q~a~LtRLa~TL-~~-Vp~--L~WIVVEd~~~~t~~va~lL~-------rsGl~y~HL~~~~p~ 87 (281)
T 3cu0_A 19 SHMTIYVVTPTYARLVQKAELVRLSQTL-SL-VPR--LHWLLVEDAEGPTPLVSGLLA-------ASGLLFTHLVVLTPK 87 (281)
T ss_dssp --CEEEEEEEECCSTTHHHHHHHHHHHH-TT-SSS--EEEEEEESSSSCCHHHHHHHH-------HHCSEEEEEECCCC-
T ss_pred CCCeEEEEeCCCCCcchhHHHHHHHHHH-hc-CCc--eEEEEEcCCCCCCHHHHHHHH-------HcCCceEEeccCCCc
Confidence 6899999999999972 333332333 22 254 667789986 3677777776 567776665443222
Q ss_pred CCc-------------cccHHHHhhhcc--------cC------CceEEEEEcCCCCCChHHHHHH
Q 011596 294 GYK-------------AGNLKSAMNCSY--------VK------DYEFVAIFDADFQPNPDFLRRT 332 (482)
Q Consensus 294 g~K-------------a~aln~al~~~~--------~a------~~d~Vl~lDaD~~~~pd~L~~l 332 (482)
..+ ..+.|.|++.+. .. ..-+|.|.|+|...+-+..++|
T Consensus 88 ~~~~~~~dp~w~~~rg~~QRN~AL~~Ir~~~~~~~~~~~~~~~~~~GVVyFADDDNtYsl~LFdem 153 (281)
T 3cu0_A 88 AQRLREGEPGWVHPRGVEQRNKALDWLRGRGGAVGGEKDPPPPGTQGVVYFADDDNTYSRELFEEM 153 (281)
T ss_dssp ----------CCCCCSHHHHHHHHHHHTTCCCEEEECCSCCCTTCCEEEEECCTTSEECHHHHHHH
T ss_pred cccccccccccccchhHHHHHHHHHHHHhhccccchhccccccCCceeEEEecCCCcccHHHHHHh
Confidence 211 245888987653 11 2468999999999998877763
|
| >2d0j_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 2; rossmann-like fold, glucuronyltransferase; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.77 E-value=0.24 Score=46.07 Aligned_cols=103 Identities=10% Similarity=0.099 Sum_probs=65.2
Q ss_pred CCeEEEEeecCCch---HHHHHHHHHHHhCCCCCCceEEEEEcCCCC--HHHHHHHHHHHHHhhhCCCeEEEEeccCCCC
Q 011596 220 FPMVLVQIPMCNEK---EVYQQSIAAVCNLDWPKSKILIQVLDDSDD--PTAQTLIKEEVLKWQEAGANIVYRHRILRDG 294 (482)
Q Consensus 220 ~P~VsViIP~yne~---~~l~~tL~Sll~q~yp~~~~~IiVvDdssd--d~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g 294 (482)
+|.+-||.|+|... ..|.+.-..+. + -|+ +.-|||+|+.. +.+.++++ ..|+...+..-..+..
T Consensus 2 ~p~I~vVTPTy~R~~Q~a~LtRLa~TL~-~-Vp~--l~WIVVEd~~~~~~~v~~lL~-------~sgl~y~HL~~~~~~~ 70 (246)
T 2d0j_A 2 LPTIYAITPTYSRPVQKAELTRLANTFR-Q-VAQ--LHWILVEDAAARSELVSRFLA-------RAGLPSTHLHVPTPRR 70 (246)
T ss_dssp CCCEEEEEEECCSTTHHHHHHHHHHHHT-T-STT--EEEEEEESSSSCCHHHHHHHH-------HSCSCEEEEECCCCCC
T ss_pred CCEEEEEeCCCCccchhHHHHHHHHHHh-c-CCc--eEEEEEcCCCCCCHHHHHHHH-------HcCCceEEEecCCccc
Confidence 68899999999997 23333333333 2 354 66778888653 44566665 6788766654332111
Q ss_pred Cc-------cccHHHHhhhccc------CCceEEEEEcCCCCCChHHHHHHH
Q 011596 295 YK-------AGNLKSAMNCSYV------KDYEFVAIFDADFQPNPDFLRRTV 333 (482)
Q Consensus 295 ~K-------a~aln~al~~~~~------a~~d~Vl~lDaD~~~~pd~L~~lv 333 (482)
+| ..+.|.|++.+.. ...-+|.|.|+|...+-+..+++-
T Consensus 71 ~~~~~~prg~~qRn~AL~~Ir~~~~~~~~~~GVVyFADDdNtY~l~LF~emR 122 (246)
T 2d0j_A 71 YKRPGLPRATEQRNAGLAWLRQRHQHQRAQPGVLFFADDDNTYSLELFQEMR 122 (246)
T ss_dssp ----CCCCCHHHHHHHHHHHHHHSCSSSCCCCEEEECCTTCEECTHHHHHHT
T ss_pred cCCCCCcchHHHHHHHHHHHHHhcccccCccceEEEccCCCcccHHHHHHHh
Confidence 11 2567888876421 134799999999999887777643
|
| >3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A* | Back alignment and structure |
|---|
Probab=94.00 E-value=0.24 Score=46.98 Aligned_cols=177 Identities=10% Similarity=0.093 Sum_probs=91.4
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHhhhcccCCce
Q 011596 234 EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKDYE 313 (482)
Q Consensus 234 ~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al~~~~~a~~d 313 (482)
..+..+++.+.+... +++ +|+-| ++...+.++ ..++++++.... ..+|..+ +..+++.....+.|
T Consensus 44 Pmi~~~l~~l~~~~i--~~I--vV~t~--~~~i~~~~~-------~~g~~v~~~~~~-~~~Gt~~-i~~~~~~l~~~~~d 108 (264)
T 3k8d_A 44 PMIVHVLERARESGA--ERI--IVATD--HEDVARAVE-------AAGGEVCMTRAD-HQSGTER-LAEVVEKCAFSDDT 108 (264)
T ss_dssp EHHHHHHHHHHHTTC--SEE--EEEES--CHHHHHHHH-------HTTCEEEECCTT-CCSHHHH-HHHHHHHHTCCTTC
T ss_pred EHHHHHHHHHHhCCC--CEE--EEECC--HHHHHHHHH-------HcCCEEEEecCC-CCCCHHH-HHHHHHHhccCCCC
Confidence 488888888887652 343 33333 344433332 456777654222 2333433 55666532123679
Q ss_pred EEEEEcCCC-CCChHHHHHHHHHhhcCC-CeEEEeeeee------------e-ecCCCChHHHHHhhhhh-hhhhhhhh-
Q 011596 314 FVAIFDADF-QPNPDFLRRTVPHFKDNE-ELGLVQARWS------------F-VNKDENLLTRLQDINLS-FHFEVEQQ- 376 (482)
Q Consensus 314 ~Vl~lDaD~-~~~pd~L~~lv~~f~~~p-~v~~V~~~~~------------~-~n~~~~~~~~~~~~~~~-~~~~~~~~- 376 (482)
+++++++|. .++++.+++++..+.+.. ++..+..+.. . .+.+.... .+.-. .-+.....
T Consensus 109 ~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~~~~~~v~d~~~~~~p~~vkVv~d~~g~~l----~fsr~~ip~~r~~~~ 184 (264)
T 3k8d_A 109 VIVNVQGDEPMIPATIIRQVADNLAQRQVGMATLAVPIHNAEEAFNPNAVKVVLDAEGYAL----YFSRATIPWDRDRFA 184 (264)
T ss_dssp EEEEECTTCTTCCHHHHHHHHHHHHTSSCSEEEEEEECCSHHHHTCTTSCEEEECTTSBEE----EEESSCCSCCHHHHH
T ss_pred EEEEEcCCcccCCHHHHHHHHHHHhhcCCCEEEEEEEcCCHHHccCCCceEEEECCCCeEE----EEecCCCCCCCcccc
Confidence 999999999 668999999999987422 2333333221 0 11111100 00000 00000000
Q ss_pred hcc-ccccccccccceEeeeHHHHHHcCCCCCCCchhHHH--HHHHHHHCCCcEEEe
Q 011596 377 VNG-VFINFFGFNGTAGVWRIKALEDSGGWMERTTVEDMD--IAVRAHLRGWKFIFL 430 (482)
Q Consensus 377 ~~~-~~~~~~~~~G~~~~~Rr~~l~~iGgf~~~~~~ED~~--l~~rl~~~G~ki~~~ 430 (482)
... ......-.+....+||++++++.-...+. ..|..+ -.+|+..+|+++...
T Consensus 185 ~~~~~~~~~~~~~~GiY~y~~~~l~~~~~~~~~-~lE~~e~leqlr~le~G~~I~~~ 240 (264)
T 3k8d_A 185 EGLETVGDNFLRHLGIYGYRAGFIRRYVNWQPS-PLEHIEMLEQLRVLWYGEKIHVA 240 (264)
T ss_dssp HCSSCCCSCCEEECSEEEEEHHHHHHHHHSCCC-HHHHHHTCTTHHHHHTTCCEEEE
T ss_pred ccccccCCcceEEEEEEEECHHHHHHHHhCCCC-hhhhHHHHHHHHHHHCCCceEEE
Confidence 000 00011124667889999999987554432 233221 235778999999875
|
| >3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13 | Back alignment and structure |
|---|
Probab=93.48 E-value=0.25 Score=46.31 Aligned_cols=91 Identities=12% Similarity=0.137 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHhhhcccCCce
Q 011596 234 EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKDYE 313 (482)
Q Consensus 234 ~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al~~~~~a~~d 313 (482)
..+..+++.+.+... +++ |+++| ++...+.++ +.++++++.......| .++ +..+++.....+.|
T Consensus 28 Pli~~~l~~l~~~~~--~~i-vVv~~---~~~i~~~~~-------~~g~~v~~~~~~~~~G-t~~-~~~~~~~l~~~~~d 92 (252)
T 3oam_A 28 PMIQWVYEQAMQAGA--DRV-IIATD---DERVEQAVQ-------AFGGVVCMTSPNHQSG-TER-LAEVVAKMAIPADH 92 (252)
T ss_dssp EHHHHHHHHHHHTTC--SEE-EEEES---CHHHHHHHH-------HTTCEEEECCTTCCSH-HHH-HHHHHHHTTCCTTS
T ss_pred EHHHHHHHHHHhCCC--CeE-EEECC---HHHHHHHHH-------HcCCEEEEcCCCCCCc-HHH-HHHHHHhcCcCCCC
Confidence 588888888887652 344 33443 344433332 4577877653333333 444 44455421113579
Q ss_pred EEEEEcCCC-CCChHHHHHHHHHhhcC
Q 011596 314 FVAIFDADF-QPNPDFLRRTVPHFKDN 339 (482)
Q Consensus 314 ~Vl~lDaD~-~~~pd~L~~lv~~f~~~ 339 (482)
.++++++|. .++++.+.+++..+.++
T Consensus 93 ~vlv~~gD~Pli~~~~i~~l~~~~~~~ 119 (252)
T 3oam_A 93 IVVNVQGDEPLIPPAIIRQVADNLAAC 119 (252)
T ss_dssp EEEECCTTCTTCCHHHHHHHHHHHHHS
T ss_pred EEEEEeCCeeecCHHHHHHHHHHHHhc
Confidence 999999999 67899999999988753
|
| >1omz_A Alpha-1,4-N-acetylhexosaminyltransferase EXTL2; rossmann fold, DXD motif; HET: UD2; 2.10A {Mus musculus} SCOP: c.68.1.15 PDB: 1omx_A* 1on6_A* 1on8_A* | Back alignment and structure |
|---|
Probab=92.18 E-value=0.81 Score=43.80 Aligned_cols=117 Identities=6% Similarity=0.051 Sum_probs=72.5
Q ss_pred CCeEEEEeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCcccc
Q 011596 220 FPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGN 299 (482)
Q Consensus 220 ~P~VsViIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~a 299 (482)
....+|+|-+|+..+.+.+.|..+.+..+=. ++.|+-.+....+.. ... ...+...+.+.++.... + .
T Consensus 27 ~~~FTvvi~ty~R~~~L~~lv~~~~~~~~v~-~IvVvWn~~~~~pp~-~~~----~~~~~~~vpv~v~~~~~-n-----s 94 (293)
T 1omz_A 27 LDSFTLIMQTYNRTDLLLRLLNHYQAVPSLH-KVIVVWNNVGEKGPE-ELW----NSLGPHPIPVIFKPQTA-N-----K 94 (293)
T ss_dssp TTCEEEEEEESSCHHHHHHHHHHHTTSTTEE-EEEEEECCTTCCCTH-HHH----HHTCCCSSCEEEEECSS-C-----C
T ss_pred CCceEEEEEeecccHHHHHHHHHHhcCCCCC-eEEEEeCCCCCCCCh-hhc----cccCCCCccEEEEeCCC-C-----c
Confidence 4479999999999999999998876654322 333333333222221 111 11222346666553221 1 2
Q ss_pred HHHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeee
Q 011596 300 LKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARW 349 (482)
Q Consensus 300 ln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~ 349 (482)
+|.=+.-.-.-+.|-|+.+|+|..++.+.|+.......++|+ -+|+...
T Consensus 95 LnnRF~p~~~i~T~AVLslDDDv~l~~~el~faF~vWr~~Pd-RlVGf~~ 143 (293)
T 1omz_A 95 MRNRLQVFPEVETNAVLMVDDDTLISAQDLVFAFSIWQQFPD-QIIGFVP 143 (293)
T ss_dssp GGGGGSCCTTCCSSEEEEECTTEEECHHHHHHHHHHHTTSTT-SEEESCE
T ss_pred hhhccCCCccCCcCEEEEEcCCCCCCHHHHHHHHHHHHHCcc-ceecCch
Confidence 343332112457899999999999999999999999988887 3555543
|
| >1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13 | Back alignment and structure |
|---|
Probab=88.68 E-value=5.7 Score=36.04 Aligned_cols=93 Identities=13% Similarity=0.126 Sum_probs=55.5
Q ss_pred hHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEecc--CCCCCccccHHHHhhhcccC
Q 011596 233 KEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRI--LRDGYKAGNLKSAMNCSYVK 310 (482)
Q Consensus 233 ~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~--~~~g~Ka~aln~al~~~~~a 310 (482)
...+..+++.+.+...- ++ |+|+-+ ++...+.++ ..++.++..... ....+..+++..|++. ..
T Consensus 28 kpli~~~i~~~~~~~~~-~~--ivv~~~--~~~i~~~~~-------~~g~~~~~~~~~~~~~~~~~~~~v~~al~~--~~ 93 (229)
T 1qwj_A 28 VPLIGWVLRAALDAGVF-QS--VWVSTD--HDEIENVAK-------QFGAQVHRRSSETSKDSSTSLDAIVEFLNY--HN 93 (229)
T ss_dssp EEHHHHHHHHHHHHTCC-SE--EEEEES--CHHHHHHHH-------HTTCEEEECCGGGSSTTCCHHHHHHHHHTT--CT
T ss_pred EEHHHHHHHHHHhCCCc-CE--EEEECC--hHHHHHHHH-------HcCCEEEeChhhhcCCCCcHHHHHHHHHHh--cC
Confidence 35888888888775421 23 333332 333333332 346776533211 1111123556677763 23
Q ss_pred CceEEEEEcCCC-CCChHHHHHHHHHhhcC
Q 011596 311 DYEFVAIFDADF-QPNPDFLRRTVPHFKDN 339 (482)
Q Consensus 311 ~~d~Vl~lDaD~-~~~pd~L~~lv~~f~~~ 339 (482)
+.|+++++++|. .++++.+.+++..+..+
T Consensus 94 ~~d~vlv~~~D~Pli~~~~i~~l~~~~~~~ 123 (229)
T 1qwj_A 94 EVDIVGNIQATSPCLHPTDLQKVAEMIREE 123 (229)
T ss_dssp TCSEEEEECTTCTTCCHHHHHHHHHHHHSS
T ss_pred CCCEEEEecCCCCcCCHHHHHHHHHHHHhC
Confidence 679999999999 46899999999988654
|
| >2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A | Back alignment and structure |
|---|
Probab=88.10 E-value=2.5 Score=37.16 Aligned_cols=90 Identities=13% Similarity=0.134 Sum_probs=54.1
Q ss_pred chHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHhhhcccCC
Q 011596 232 EKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKD 311 (482)
Q Consensus 232 e~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al~~~~~a~ 311 (482)
....+..+++.+.+... ++ |+|+-+...+...+.+ ...++++++. +....+..+++..|++.. ..+
T Consensus 30 g~pll~~~l~~l~~~~~--~~--i~vv~~~~~~~~~~~~-------~~~~~~~~~~--~~~~~g~~~~i~~al~~~-~~~ 95 (197)
T 2wee_A 30 DTTVLGATLDVARQAGF--DQ--LILTLGGAASAVRAAM-------ALDGTDVVVV--EDVERGCAASLRVALARV-HPR 95 (197)
T ss_dssp TEEHHHHHHHHHHHTTC--SE--EEEEECTTHHHHHHHS-------CCTTSEEEEC--C----CCHHHHHHHHTTS-CTT
T ss_pred CccHHHHHHHHHHhcCC--Cc--EEEEeCCCHHHHHHHh-------ccCCCEEEEC--CCcccCHHHHHHHHHHHh-ccc
Confidence 34688889998887542 23 3344332223222211 1346766542 212223667788888742 125
Q ss_pred ceEEEEEcCCC-CCChHHHHHHHHH
Q 011596 312 YEFVAIFDADF-QPNPDFLRRTVPH 335 (482)
Q Consensus 312 ~d~Vl~lDaD~-~~~pd~L~~lv~~ 335 (482)
.|+++++++|. .++++.+++++..
T Consensus 96 ~~~vlv~~~D~P~~~~~~i~~l~~~ 120 (197)
T 2wee_A 96 ATGIVLMLGDQPQVAPATLRRIIDV 120 (197)
T ss_dssp EEEEEEEETTCTTCCHHHHHHHHHH
T ss_pred CCeEEEEeCCcCCCCHHHHHHHHhh
Confidence 79999999999 5689999999987
|
| >2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP} | Back alignment and structure |
|---|
Probab=88.08 E-value=3.8 Score=35.92 Aligned_cols=90 Identities=12% Similarity=0.050 Sum_probs=55.9
Q ss_pred chHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHhhhcccCC
Q 011596 232 EKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKD 311 (482)
Q Consensus 232 e~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al~~~~~a~ 311 (482)
....+..+++.+.+... ++ |+|+-+...+...+.+ ...++++++. +....+..+++..|++.. ..+
T Consensus 30 g~pli~~~l~~l~~~~~--~~--i~vv~~~~~~~~~~~~-------~~~~~~~~~~--~~~~~g~~~~i~~al~~~-~~~ 95 (199)
T 2waw_A 30 DTTLLGATLAMARRCPF--DQ--LIVTLGGAADEVLEKV-------ELDGLDIVLV--DDAGLGCSSSLKSALTWV-DPT 95 (199)
T ss_dssp TEEHHHHHHHHHHTSSC--SE--EEEEECTTHHHHHHHS-------CCTTSEEEEC--CCCCTTCCCHHHHHHHTS-CTT
T ss_pred ccCHHHHHHHHHHhCCC--Cc--EEEEeCCCHHHHHHHh-------ccCCCEEEEC--CCcccCHHHHHHHHHHhh-hcc
Confidence 34688899998887642 23 4444333323322221 1346766542 222223677888888842 125
Q ss_pred ceEEEEEcCCCC-CChHHHHHHHHH
Q 011596 312 YEFVAIFDADFQ-PNPDFLRRTVPH 335 (482)
Q Consensus 312 ~d~Vl~lDaD~~-~~pd~L~~lv~~ 335 (482)
.|+++++++|.. ++++.+++++..
T Consensus 96 ~~~vlv~~~D~P~~~~~~i~~l~~~ 120 (199)
T 2waw_A 96 AEGIVLMLGDQPGITASAVASLIAG 120 (199)
T ss_dssp CSEEEEEETTCTTCCHHHHHHHHHH
T ss_pred CCeEEEEeCCcccCCHHHHHHHHhh
Confidence 689999999996 589999999987
|
| >2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=85.94 E-value=4.4 Score=36.69 Aligned_cols=90 Identities=8% Similarity=0.086 Sum_probs=54.3
Q ss_pred chHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHhhhcccCC
Q 011596 232 EKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKD 311 (482)
Q Consensus 232 e~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al~~~~~a~ 311 (482)
....+..+++.+.+. . +++ ++++++ +...+.+ . .. +.+++.. +...++.++.+ .+++ ..+
T Consensus 26 g~pli~~~l~~~~~~-~--~~i-~v~~~~---~~i~~~~----~---~~-~~~~~~~-~~~~~g~~~~~-~~~~---~~~ 85 (234)
T 2y6p_A 26 GKPLIRWVVEGLVKT-G--ERV-ILATDS---ERVKEVV----E---DL-CEVFLTP-SDLPSGSDRVL-YVVR---DLD 85 (234)
T ss_dssp TEEHHHHHHHHHHTT-T--SCE-EEEESC---HHHHHHH----T---TT-SEEEECC-TTCCSHHHHHH-HHHT---TCC
T ss_pred CEEHHHHHHHHHHHh-C--CEE-EEECCh---HHHHHHH----H---hc-eEEEECC-cccccchHHHH-HHHH---hCC
Confidence 347888899988876 2 233 334433 3332222 2 22 5555432 22233344444 4555 345
Q ss_pred ceEEEEEcCCC-CCChHHHHHHHHHhhcCCC
Q 011596 312 YEFVAIFDADF-QPNPDFLRRTVPHFKDNEE 341 (482)
Q Consensus 312 ~d~Vl~lDaD~-~~~pd~L~~lv~~f~~~p~ 341 (482)
.|+++++++|. ..++..+.+++..+.++++
T Consensus 86 ~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~~ 116 (234)
T 2y6p_A 86 VDLIINYQGDEPFVYEEDIKLIFRELEKGER 116 (234)
T ss_dssp CSEEEECCTTCCCCCHHHHHHHHHHHHHTCS
T ss_pred CCEEEEecCCcCcCCHHHHHHHHHHHHhCCC
Confidence 78999999999 8899999999998865444
|
| >3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A* | Back alignment and structure |
|---|
Probab=82.34 E-value=6.6 Score=40.41 Aligned_cols=112 Identities=12% Similarity=0.082 Sum_probs=66.9
Q ss_pred EeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHhh
Q 011596 226 QIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMN 305 (482)
Q Consensus 226 iIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al~ 305 (482)
++|..|.+ .|.-.|+.+.+.... + |+|+-....+...+.+.+..++ .+.++.|....++.| -++|+..++.
T Consensus 34 l~pv~gkp-~i~~~l~~~~~~g~~--~--i~vv~~~~~~~i~~~~~~~~~~---~~~~i~~~~q~~~lG-Ta~Av~~a~~ 104 (501)
T 3st8_A 34 LHTLAGRS-MLSHVLHAIAKLAPQ--R--LIVVLGHDHQRIAPLVGELADT---LGRTIDVALQDRPLG-TGHAVLCGLS 104 (501)
T ss_dssp GCEETTEE-HHHHHHHHHHHHCCS--E--EEEEECTTHHHHHHHHHHHHHH---HTSCCEEEECSSCCC-HHHHHHHHHT
T ss_pred HeEECChh-HHHHHHHHHHhCCCC--E--EEEEeCCCHHHHHHHHHHHHHh---cCCcEEEEEcCCCCC-cHHHHHHHHH
Confidence 56777876 777788888776532 3 4444444445555555443332 344555554555555 7888888887
Q ss_pred hcccCCceEEEEEcCCC-CCChHHHHHHHHHhhcCC-CeEEEe
Q 011596 306 CSYVKDYEFVAIFDADF-QPNPDFLRRTVPHFKDNE-ELGLVQ 346 (482)
Q Consensus 306 ~~~~a~~d~Vl~lDaD~-~~~pd~L~~lv~~f~~~p-~v~~V~ 346 (482)
.......+.++++.+|+ ....+.+..++.....+. .+.++.
T Consensus 105 ~l~~~~~~~~lvl~gd~~l~~~~~~~~l~~~h~~~~~~~ti~~ 147 (501)
T 3st8_A 105 ALPDDYAGNVVVTSGDTPLLDADTLADLIATHRAVSAAVTVLT 147 (501)
T ss_dssp TSCTTCCSEEEEEETTCTTCCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HhccccccceeeecCcceeecHHHHHHHHHHHhhccccceEee
Confidence 53222234566666665 668899999988776533 333433
|
| >1vic_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics; 1.80A {Haemophilus influenzae} SCOP: c.68.1.13 PDB: 1vh3_A 3duv_A* | Back alignment and structure |
|---|
Probab=80.37 E-value=8.9 Score=35.48 Aligned_cols=92 Identities=13% Similarity=0.172 Sum_probs=54.0
Q ss_pred chHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHhhhcccCC
Q 011596 232 EKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKD 311 (482)
Q Consensus 232 e~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al~~~~~a~ 311 (482)
....+..+++.+.+... ++ |+|+-+. +...+.+ . ..++.+++.. ....++.+ .+..+++.....+
T Consensus 26 gkpli~~~l~~l~~~~~--~~--ivvv~~~--~~i~~~~----~---~~~~~~~~~~-~~~~~g~~-~~~~~~~~l~~~~ 90 (262)
T 1vic_A 26 GKPMIQHVFEKALQSGA--SR--VIIATDN--ENVADVA----K---SFGAEVCMTS-VNHNSGTE-RLAEVVEKLAIPD 90 (262)
T ss_dssp TEEHHHHHHHHHHHTTC--SE--EEEEESC--HHHHHHH----H---HTTCEEEECC-CSSCCHHH-HHHHHHHHTTCCT
T ss_pred CeEHHHHHHHHHHhCCC--ce--EEEECCc--HHHHHHH----H---hcCCEEEECC-ccccCChH-HHHHHHHHhccCC
Confidence 34788899999887654 34 3344332 3333332 2 3467765431 12222233 3444443211235
Q ss_pred ceEEEEEcCCC-CCChHHHHHHHHHhhc
Q 011596 312 YEFVAIFDADF-QPNPDFLRRTVPHFKD 338 (482)
Q Consensus 312 ~d~Vl~lDaD~-~~~pd~L~~lv~~f~~ 338 (482)
.|+++++++|. .++++.+++++..+..
T Consensus 91 ~~~vlv~~~D~P~i~~~~i~~l~~~~~~ 118 (262)
T 1vic_A 91 NEIIVNIQGDEPLIPPVIVRQVADNLAK 118 (262)
T ss_dssp TCEEEECCTTCTTCCHHHHHHHHHHHHH
T ss_pred CCEEEEEeCCcCccCHHHHHHHHHHHHh
Confidence 78999999999 5689999999988764
|
| >1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A* | Back alignment and structure |
|---|
Probab=80.25 E-value=14 Score=33.56 Aligned_cols=92 Identities=11% Similarity=0.120 Sum_probs=54.5
Q ss_pred CchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHhhhcccC
Q 011596 231 NEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVK 310 (482)
Q Consensus 231 ne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al~~~~~a 310 (482)
+....+..+++.+.+.... +++ ++++++ +...+.++ ..++.++... ....++.++. ..+++. .
T Consensus 25 ~g~pli~~~i~~~~~~~~~-~~i-vvv~~~---~~i~~~~~-------~~~~~~~~~~-~~~~~g~~~~-~~~~~~---~ 87 (245)
T 1h7e_A 25 VGKPMIQHVYERALQVAGV-AEV-WVATDD---PRVEQAVQ-------AFGGKAIMTR-NDHESGTDRL-VEVMHK---V 87 (245)
T ss_dssp TTEEHHHHHHHHHHTCTTC-CEE-EEEESC---HHHHHHHH-------HTTCEEEECC-SCCSSHHHHH-HHHHHH---S
T ss_pred CCchHHHHHHHHHHhCCCC-CeE-EEECCc---HHHHHHHH-------HcCCeEEeCC-CccCCcHHHH-HHHHHh---C
Confidence 3446888899998876532 233 334432 33333322 3467765431 1222223333 344442 3
Q ss_pred CceEEEEEcCCCC-CChHHHHHHHHHhhcC
Q 011596 311 DYEFVAIFDADFQ-PNPDFLRRTVPHFKDN 339 (482)
Q Consensus 311 ~~d~Vl~lDaD~~-~~pd~L~~lv~~f~~~ 339 (482)
+.|.++++++|.- ++++.+.+++..+..+
T Consensus 88 ~~~~~lv~~~D~P~~~~~~i~~l~~~~~~~ 117 (245)
T 1h7e_A 88 EADIYINLQGDEPMIRPRDVETLLQGMRDD 117 (245)
T ss_dssp CCSEEEECCTTCTTCCHHHHHHHHHHHHHC
T ss_pred CCCEEEEEcCCcCcCCHHHHHHHHHHHHhC
Confidence 5789999999995 5899999999988654
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 482 | ||||
| d1xhba2 | 328 | c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosa | 8e-08 | |
| d1omza_ | 265 | c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransf | 3e-05 | |
| d1qg8a_ | 255 | c.68.1.1 (A:) Spore coat polysaccharide biosynthes | 2e-04 |
| >d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Score = 51.9 bits (123), Expect = 8e-08
Identities = 28/233 (12%), Positives = 72/233 (30%), Gaps = 26/233 (11%)
Query: 221 PMVLVQIPMCNEKEVY-QQSIAAVCNLDWPKSKILIQVLDD-SDDPTAQTLIKEEVLKWQ 278
P V I NE +++ +V N I ++DD S+ + ++ V K +
Sbjct: 22 PTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVKKLK 81
Query: 279 EAGANIVYRHRILRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKD 338
++R ++G +++ + + V + + DA + +L + K
Sbjct: 82 -------VPVHVIRMEQRSGLIRARLKGAAVSRGQVITFLDAHCECTAGWLEPLLARIKH 134
Query: 339 NEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQQVNGVF--------------INF 384
+ + + + F++++ + V +
Sbjct: 135 DRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRTLPVRT 194
Query: 385 FGFNGTAGVWRIKALEDSGGWMERTTV---EDMDIAVRAHLRGWKFIFLNDVE 434
G ++ G + + E+++I+ R G +
Sbjct: 195 PTMAGGLFSIDRDYFQEIGTYDAGMDIWGGENLEISFRIWQCGGTLEIVTCSH 247
|
| >d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]} Length = 265 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: Exostosin domain: Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 43.1 bits (100), Expect = 3e-05
Identities = 22/231 (9%), Positives = 58/231 (25%), Gaps = 16/231 (6%)
Query: 225 VQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANI 284
+ + N ++ + + + K+++ V ++ + + L +
Sbjct: 7 LIMQTYNRTDLLLRLLNHYQAVPSLH-KVIV-VWNNVGEKGPEELWNS-----------L 53
Query: 285 VYRHRILRDGYKAGNLKSAMNCSYVK-DYEFVAIFDADFQPNPDFLRRTVPHFKDNEELG 343
+ + N + + + V + D D + L ++ +
Sbjct: 54 GPHPIPVIFKPQTANKMRNRLQVFPEVETNAVLMVDDDTLISAQDLVFAFSIWQQFPDQI 113
Query: 344 LVQARWSFVNKDENLLTRLQDINLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEDSG 403
+ V+ + + + Q + V I FN K
Sbjct: 114 IGFVPRKHVSTSSGIYSYGGFELQTPGPGNGDQYSMVLIGASFFNSKYLELFQKQPAAVH 173
Query: 404 GWMERTTV--EDMDIAVRAHLRGWKFIFLNDVECQCELPESYEAYRKQQHR 452
++ T + + G L + Y HR
Sbjct: 174 ALIDETQNCDDIAMNFLVTRHTGKPSGIFVKPINMVNLEKETNGYSGMWHR 224
|
| >d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]} Length = 255 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: Spore coat polysaccharide biosynthesis protein SpsA domain: Spore coat polysaccharide biosynthesis protein SpsA species: Bacillus subtilis [TaxId: 1423]
Score = 40.9 bits (94), Expect = 2e-04
Identities = 30/250 (12%), Positives = 72/250 (28%), Gaps = 29/250 (11%)
Query: 221 PMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEA 280
P V V + N+ + +SI+++ + + ++ I + D+S++ T +
Sbjct: 1 PKVSVIMTSYNKSDYVAKSISSILSQTFSDFELFI-MDDNSNEETLNVIRPFLNDNRVRF 59
Query: 281 GANIVYRHRILRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNE 340
+ + + + + L + +Y D PD L + V +
Sbjct: 60 YQSDISGVKERTEKTRYAALINQAIEMAEGEYIT--YATDDNIYMPDRLLKMVRELDTHP 117
Query: 341 ELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALE 400
E ++ + + +EN + + + + + + + R LE
Sbjct: 118 EKAVIYSASKTYHLNENRDIVKETVRPAAQVT--------WNAPCAIDHCSVMHRYSVLE 169
Query: 401 DSGGW--------MERTTVEDMDIAVRAHLRGWKFIFLNDVECQCELPESYEAYRKQQHR 452
+ D R + F L E +
Sbjct: 170 KVKEKFGSYWDESPAFYRIGDARFFWRV-NHFYPFYP---------LDEELDLNYITDQS 219
Query: 453 WHSGPMQLFR 462
H +L +
Sbjct: 220 IHFQLFELEK 229
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 482 | |||
| d1xhba2 | 328 | Polypeptide N-acetylgalactosaminyltransferase 1, N | 99.95 | |
| d1qg8a_ | 255 | Spore coat polysaccharide biosynthesis protein Sps | 99.88 | |
| d1omza_ | 265 | Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-Ga | 99.76 | |
| d2bo4a1 | 381 | Mannosylglycerate synthase, MGS {Rhodothermus mari | 99.31 | |
| d1fo8a_ | 343 | N-acetylglucosaminyltransferase I {Rabbit (Oryctol | 97.78 | |
| d1pzta_ | 271 | beta 1,4 galactosyltransferase (b4GalT1) {Cow (Bos | 97.43 | |
| d1v82a_ | 252 | Beta-1,3-glucuronyltransferase 1, GlcAT-P {Human ( | 95.03 | |
| d3cu0a1 | 261 | 1,3-Glucuronyltransferase I (glcAT-I) {Human (Homo | 93.71 | |
| d1qwja_ | 228 | CMP acylneuraminate synthetase {Mouse (Mus musculu | 88.31 | |
| d1eyra_ | 225 | CMP acylneuraminate synthetase {Neisseria meningit | 85.97 | |
| d1vh1a_ | 246 | CMP:2-keto-3-deoxy-manno-octonic acid (CMP-KDO)syn | 81.91 |
| >d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.95 E-value=1.9e-27 Score=235.51 Aligned_cols=213 Identities=14% Similarity=0.141 Sum_probs=150.0
Q ss_pred CCCCeEEEEeecCCch-HHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHH-HHHHHHHHHHhhhCCCeEEEEeccCCCCC
Q 011596 218 GFFPMVLVQIPMCNEK-EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTA-QTLIKEEVLKWQEAGANIVYRHRILRDGY 295 (482)
Q Consensus 218 ~~~P~VsViIP~yne~-~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t-~~~~~~~~~~~~~~~v~vv~~~~~~~~g~ 295 (482)
..+|.||||||+|||. +.|.+||+|+++|+||....|||||||+|+|.+ .+.+++..++. ..++.+.+.+.+.|
T Consensus 19 ~~~P~vSIIIp~yNe~~~~l~~~l~Si~~qt~~~~~~EIIvVDdgS~d~~~~~~l~~~~~~~---~~~i~vi~~~~n~G- 94 (328)
T d1xhba2 19 DNLPTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVKKL---KVPVHVIRMEQRSG- 94 (328)
T ss_dssp SCCCCEEEEEEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHHHHHSS---SSCEEEEECSSCCC-
T ss_pred CCCCCEEEEEeccCCcHHHHHHHHHHHHhcCCCCCCeEEEEEECCCChhhHHHHHHHHHHhc---CCCeEEEEeccccc-
Confidence 3689999999999986 689999999999999876678999999887664 45555555532 33444444444444
Q ss_pred ccccHHHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCC-ChHH-------HHH-hhh
Q 011596 296 KAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDE-NLLT-------RLQ-DIN 366 (482)
Q Consensus 296 Ka~aln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~-~~~~-------~~~-~~~ 366 (482)
.+++.|.|++ .+++|||+|+|+|+.++|++|+.++..+.+++.. ++.+.....+.+. .... ... ...
T Consensus 95 ~~~a~N~Gi~---~a~gd~i~flD~D~~~~p~~l~~l~~~~~~~~~~-~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 170 (328)
T d1xhba2 95 LIRARLKGAA---VSRGQVITFLDAHCECTAGWLEPLLARIKHDRRT-VVCPIIDVISDDTFEYMAGSDMTYGGFNWKLN 170 (328)
T ss_dssp HHHHHHHHHH---HCCSSEEEEEESSEEECTTCHHHHHHHHHHCTTE-EEEEEEEEECSSSCCEECCCTTEEEEECTTCC
T ss_pred chHHHHHHHH---hhhcceeeecCcccccChhHHHHHHHHHhcCCCe-EEecceeeeccCceeeccCCcccccccccccc
Confidence 8999999999 6899999999999999999999999999976654 4444433322211 0000 000 000
Q ss_pred h--h-h-hhhhhhhhc--cccccccccccceEeeeHHHHHHcCCCCCCCc---hhHHHHHHHHHHCCCcEEEeccceecc
Q 011596 367 L--S-F-HFEVEQQVN--GVFINFFGFNGTAGVWRIKALEDSGGWMERTT---VEDMDIAVRAHLRGWKFIFLNDVECQC 437 (482)
Q Consensus 367 ~--~-~-~~~~~~~~~--~~~~~~~~~~G~~~~~Rr~~l~~iGgf~~~~~---~ED~~l~~rl~~~G~ki~~~~~~~~~~ 437 (482)
. . . ......... ........++|+++++||++++++|||++... .||.|+++|+.++|+++.++|++.+++
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~f~~vGgfDe~~~~~g~ED~Dl~~R~~~~G~~i~~~p~~~v~H 250 (328)
T d1xhba2 171 FRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQEIGTYDAGMDIWGGENLEISFRIWQCGGTLEIVTCSHVGH 250 (328)
T ss_dssp EEEEECCHHHHHHTTTCTTSCEECSBCCSSSEEEEHHHHHHTTSCCTTSCTTCCCCSHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred ccccccchhhhhccccccccccccceecceeeeeeHHHHHHhCCCCCCCcCcCchHHHHHHHHHHhCCeEEEeCCeEEEE
Confidence 0 0 0 000000000 01112233689999999999999999998743 599999999999999999999998776
Q ss_pred c
Q 011596 438 E 438 (482)
Q Consensus 438 ~ 438 (482)
.
T Consensus 251 ~ 251 (328)
T d1xhba2 251 V 251 (328)
T ss_dssp E
T ss_pred e
Confidence 3
|
| >d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: Spore coat polysaccharide biosynthesis protein SpsA domain: Spore coat polysaccharide biosynthesis protein SpsA species: Bacillus subtilis [TaxId: 1423]
Probab=99.88 E-value=1.8e-23 Score=198.75 Aligned_cols=205 Identities=14% Similarity=0.145 Sum_probs=145.6
Q ss_pred CeEEEEeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEec-----cCCCCC
Q 011596 221 PMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHR-----ILRDGY 295 (482)
Q Consensus 221 P~VsViIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~-----~~~~g~ 295 (482)
|.|||+||+||+++.+++||+|+++|+|++ +||+|+||+|+|.+.++++++.. +.+++++.... ...+.|
T Consensus 1 P~vSiiip~yN~~~~l~~~l~Si~~Qt~~~--~eiivvdd~S~d~t~~~l~~~~~---~~~i~~~~~~~~~~~~~~~~~g 75 (255)
T d1qg8a_ 1 PKVSVIMTSYNKSDYVAKSISSILSQTFSD--FELFIMDDNSNEETLNVIRPFLN---DNRVRFYQSDISGVKERTEKTR 75 (255)
T ss_dssp CCEEEEEEESSCTTTHHHHHHHHHTCSCCC--EEEEEEECSCCHHHHHHHGGGGG---STTEEEEECCCCSHHHHHSSCH
T ss_pred CEEEEEEecCCCHHHHHHHHHHHHhCCCCC--eEEEEEECCCCccHHHHHHHhhh---hcccccccccccccccccccch
Confidence 789999999999999999999999999997 78999999999999998876543 33454432110 013456
Q ss_pred ccccHHHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHHHHhhhhhhhhhhhh
Q 011596 296 KAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQ 375 (482)
Q Consensus 296 Ka~aln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ 375 (482)
.++++|.|++ .+++|||+++|+|+.++|++|++++..+.++|+++++.+.....+.+++........ ..
T Consensus 76 ~~~a~N~gi~---~a~g~~i~~lD~Dd~~~p~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-----~~--- 144 (255)
T d1qg8a_ 76 YAALINQAIE---MAEGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTYHLNENRDIVKETV-----RP--- 144 (255)
T ss_dssp HHHHHHHHHH---HCCCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEEEEEEEEEEC---CEEEEEE-----EC---
T ss_pred hccccccccc---ccccccccccccccccccchHHHHHHHHHhCCCCCeEeecceeeeeCCCCcEeeeec-----cc---
Confidence 8899999999 689999999999999999999999999988999999987765544333211000000 00
Q ss_pred hhccccccccccccceEeeeHHHHHHcC----CCC-CC---CchhHHHHHHHHHHCCCcEEEecccee-cccCCcC
Q 011596 376 QVNGVFINFFGFNGTAGVWRIKALEDSG----GWM-ER---TTVEDMDIAVRAHLRGWKFIFLNDVEC-QCELPES 442 (482)
Q Consensus 376 ~~~~~~~~~~~~~G~~~~~Rr~~l~~iG----gf~-~~---~~~ED~~l~~rl~~~G~ki~~~~~~~~-~~~~p~t 442 (482)
...........+.++++++|++++++++ +|. +. ...||.++++|+. .++++.++++... +...+.+
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~dl~lrl~-~~~~~~~i~~~l~~~~~~~~s 219 (255)
T d1qg8a_ 145 AAQVTWNAPCAIDHCSVMHRYSVLEKVKEKFGSYWDESPAFYRIGDARFFWRVN-HFYPFYPLDEELDLNYITDQS 219 (255)
T ss_dssp CCSCBSCCTTTSCGGGEEEETHHHHHHHHHHSSSSCCCGGGSTTHHHHHHHHHT-TTCCBEEEEEEEEEEEEC---
T ss_pred chhhhhhhcccccchhHHHHHHHHHHHHHhhCCCccccchhcchhhHHHHHHHH-cCCCEEEecCCEEEEEEcCCc
Confidence 0001111222356777899999998863 443 32 3469999999986 4678889888764 3344444
|
| >d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: Exostosin domain: Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.76 E-value=5.9e-19 Score=164.08 Aligned_cols=186 Identities=10% Similarity=0.038 Sum_probs=123.4
Q ss_pred CCeEEEEeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCcccc
Q 011596 220 FPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGN 299 (482)
Q Consensus 220 ~P~VsViIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~a 299 (482)
+.++||+||+||+++.|.+||+|+++|+|++ .+|+|+||++|+++..+.+. +.+....+++. . .++|++++
T Consensus 2 ~~~~tvii~tyn~~~~l~~~l~sl~~q~~~~--~~iiV~d~~sd~~~~~i~~~----~~~~~~~~~~~--~-~~~g~~~a 72 (265)
T d1omza_ 2 LDSFTLIMQTYNRTDLLLRLLNHYQAVPSLH--KVIVVWNNVGEKGPEELWNS----LGPHPIPVIFK--P-QTANKMRN 72 (265)
T ss_dssp TTCEEEEEEESSCHHHHHHHHHHHTTSTTEE--EEEEEECCTTCCCTHHHHHH----TCCCSSCEEEE--E-CSSCCGGG
T ss_pred CCcEEEEEEcCCCHHHHHHHHHHHHcCCCcC--eEEEEECCCCCccHHHHHHH----hcccceEEEEe--c-CCCCchhh
Confidence 4579999999999999999999999999997 35667777888888655542 22333444432 2 34459999
Q ss_pred HHHHhhhcccCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHHHHhhhhhhhhhhhhhhcc
Q 011596 300 LKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQQVNG 379 (482)
Q Consensus 300 ln~al~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (482)
+|.|++ .+++|||+++|+|+.++|++|++++..++++|+..+.++............. .... ........
T Consensus 73 ~n~~~~---~a~ge~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~ 142 (265)
T d1omza_ 73 RLQVFP---EVETNAVLMVDDDTLISAQDLVFAFSIWQQFPDQIIGFVPRKHVSTSSGIYS-YGGF------ELQTPGPG 142 (265)
T ss_dssp GGSCCT---TCCSSEEEEECTTEEECHHHHHHHHHHHTTSTTSEEESCEEEEEEEETTEEE-EECT------TSCCCSSS
T ss_pred hhhhHH---hCCcCEEEEeCcccCCCHHHHHHHHHHHHhCCCcceecccccccccCCcccc-cccc------cccccccc
Confidence 999999 6899999999999999999999999999988876655554433222111100 0000 00000011
Q ss_pred ccccccccccceEeeeHHHHHHcCCCCCC--------CchhHHHHHHHHHHCC
Q 011596 380 VFINFFGFNGTAGVWRIKALEDSGGWMER--------TTVEDMDIAVRAHLRG 424 (482)
Q Consensus 380 ~~~~~~~~~G~~~~~Rr~~l~~iGgf~~~--------~~~ED~~l~~rl~~~G 424 (482)
.........|++.++|++.++..+.+... ...+|.++.......+
T Consensus 143 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 195 (265)
T d1omza_ 143 NGDQYSMVLIGASFFNSKYLELFQKQPAAVHALIDETQNCDDIAMNFLVTRHT 195 (265)
T ss_dssp SSCCBSEECTTEEEEETHHHHHHHTSCHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred cccccceeccceeEecHHHHHHHhhhHHHHhhhhhhhcchHHHHHHHHHHHhc
Confidence 11122235688899999999877655321 3346666666555443
|
| >d2bo4a1 c.68.1.18 (A:2-382) Mannosylglycerate synthase, MGS {Rhodothermus marinus [TaxId: 29549]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: MGS-like domain: Mannosylglycerate synthase, MGS species: Rhodothermus marinus [TaxId: 29549]
Probab=99.31 E-value=3.3e-11 Score=118.76 Aligned_cols=199 Identities=14% Similarity=0.110 Sum_probs=118.1
Q ss_pred EEEeecCCch-HHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEE--ecc-CCCCCcccc
Q 011596 224 LVQIPMCNEK-EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYR--HRI-LRDGYKAGN 299 (482)
Q Consensus 224 sViIP~yne~-~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~--~~~-~~~g~Ka~a 299 (482)
-||||+|||+ +.+..+++.+.. +|.. -+|+|+||||||++.++.+.........+..+... ++. ..+.||+.+
T Consensus 2 lVVIP~~NEe~~il~~~v~~~a~--~P~~-~eIvVvDdsSdDtt~~i~~~~~~~~~~~~~~v~~~~~~~l~~~~~GKG~g 78 (381)
T d2bo4a1 2 LVVFPFKHEHPEVLLHNVRVAAA--HPRV-HEVLCIGYERDQTYEAVERAAPEISRATGTPVSVRLQERLGTLRPGKGDG 78 (381)
T ss_dssp EEEEECCSSCHHHHHHHHHHHHH--STTC-CEEEEEESSCCHHHHHHHHHHHHHHHHHSCCEEEEECCCCSSSSSSHHHH
T ss_pred EEEEEcCCCcHHHHHHHHHHHHh--CCCe-eEEEEEcCCCCCcHHHHHHHhhhhhccccccchhhhhcccccccCCCcHH
Confidence 4899999998 677777754443 3543 35778999999998776655433222233333222 111 112247766
Q ss_pred HHHHhhhc-ccCCceEEEEEcCCC-CCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHHHHhhhh-hhhhhhhhh
Q 011596 300 LKSAMNCS-YVKDYEFVAIFDADF-QPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINL-SFHFEVEQQ 376 (482)
Q Consensus 300 ln~al~~~-~~a~~d~Vl~lDaD~-~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~~~~~~~-~~~~~~~~~ 376 (482)
+..|+... ..+++|+|+++|||. ..+|+++.+++..+.. +.++|.+... ......-.++.....+ ...+. ..
T Consensus 79 ~~~A~~~g~~~a~gd~lvflDADl~~~~pe~i~~L~~~i~~--g~d~V~g~y~-R~~~~grvt~~l~~pll~~l~~--~~ 153 (381)
T d2bo4a1 79 MNTALRYFLEETQWERIHFYDADITSFGPDWITKAEEAADF--GYGLVRHYFP-RASTDAMITWMITRTGFALLWP--HT 153 (381)
T ss_dssp HHHHHHHHHHHCCCSEEEECCTTCSSCCHHHHHHHHHHHHT--TCSEEEEECC-CCTTSCHHHHHTHHHHHHHHCT--TS
T ss_pred HHHHHHHHHHhCCCCEEEEEcCCcCcCCHHHHHHHHHHHhh--hcCeEEEeec-cccCCCceehHhhHHHHHHHhh--hh
Confidence 65555421 158999999999998 5789999999999874 4556655321 1222232222111111 00000 00
Q ss_pred hccccccccccccceEeeeHHHHHHcC----CCCCCCchhHHHHHHHHHHCCCcEEEeccc
Q 011596 377 VNGVFINFFGFNGTAGVWRIKALEDSG----GWMERTTVEDMDIAVRAHLRGWKFIFLNDV 433 (482)
Q Consensus 377 ~~~~~~~~~~~~G~~~~~Rr~~l~~iG----gf~~~~~~ED~~l~~rl~~~G~ki~~~~~~ 433 (482)
....... ..+...+++|++++.+- .+.+...+-|.++...+.++|.++..+|..
T Consensus 154 ~~~~i~d---Pl~G~~a~~R~~~~~L~~~~~v~~~~~~G~Di~lt~~A~~~G~rI~EV~i~ 211 (381)
T d2bo4a1 154 ELSWIEQ---PLGGELLMRREVAAMLYEDERVRRRSDWGIDTLYTFVTVQQGVSIYECYIP 211 (381)
T ss_dssp SGGGCSC---TTCCCEEEEHHHHHHHHHCHHHHTCCSTTHHHHHHHHHHHTTCCEEEEECT
T ss_pred ccccccc---CCcccceeeHHHHHHhhhhccccccCCcccchHHHHHHHHcCCeEEecCCC
Confidence 0000111 23566789999998751 111234678999999999999999988654
|
| >d1fo8a_ c.68.1.10 (A:) N-acetylglucosaminyltransferase I {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: N-acetylglucosaminyltransferase I domain: N-acetylglucosaminyltransferase I species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=97.78 E-value=4.2e-05 Score=72.99 Aligned_cols=187 Identities=13% Similarity=0.154 Sum_probs=106.7
Q ss_pred CeEEEEeecCCchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCC------
Q 011596 221 PMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDG------ 294 (482)
Q Consensus 221 P~VsViIP~yne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g------ 294 (482)
+-+-|+|-+||.+ .+.+||+|++++.-..+...|+|..||..+.+.+.++... ..+..+. ......
T Consensus 2 ~viPVlv~a~NRP-~l~r~LesLlk~~p~~~~~~I~Vs~DG~~~~~~~~v~~~~-----~~v~~I~--~~~~~~~~~~~~ 73 (343)
T d1fo8a_ 2 AVIPILVIACDRS-TVRRCLDKLLHYRPSAELFPIIVSQDCGHEETAQVIASYG-----SAVTHIR--QPDLSNIAVQPD 73 (343)
T ss_dssp CCCCEEEEESSCT-THHHHHHHHHHHCSCTTTSCEEEEECTTCHHHHHHHHTTG-----GGSEEEE--CSCCCCCCCCTT
T ss_pred CcccEEEEEcCHH-HHHHHHHHHHhcCccccCccEEEEecCCchhHHHHHHHHH-----HHHHHhc--CCccccceecch
Confidence 4567899999998 6899999999764334456688888988888876665331 1233221 111100
Q ss_pred CccccHHH--------Hhhhcc-cCCceEEEEEcCCCCCChHHH---HHHHHHhhcCCCeEEEeeeeeeecCCCChHHHH
Q 011596 295 YKAGNLKS--------AMNCSY-VKDYEFVAIFDADFQPNPDFL---RRTVPHFKDNEELGLVQARWSFVNKDENLLTRL 362 (482)
Q Consensus 295 ~Ka~aln~--------al~~~~-~a~~d~Vl~lDaD~~~~pd~L---~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~~ 362 (482)
.+...-|. |+.... ..+++.++++.+|+.+.||++ ..++..++.|+.+.+|+|--. |......
T Consensus 74 ~~k~~~n~giarhy~~AL~~~F~~~~~~~~IiLEDDl~~spdFf~y~~~~l~~~~~D~~i~~IS~wNd--nG~~~~~--- 148 (343)
T d1fo8a_ 74 HRKFQGYYKIARHYRWALGQIFHNFNYPAAVVVEDDLEVAPDFFEYFQATYPLLKADPSLWCVSAWND--NGKEQMV--- 148 (343)
T ss_dssp CGGGHHHHHHHHHHHHHHHHHHTTSCCSEEEEEETTEEECTTHHHHHHHHHHHHHHCTTEEEEESCCT--TCBGGGS---
T ss_pred hhcccchhHHHHHHHHHHHHHhcccCCceEEEEecCceeeHHHHHHHHHHHHHHhcCCCEEEEecccc--CCCcccc---
Confidence 01111122 222211 234799999999999999887 677777788999999987521 1100000
Q ss_pred HhhhhhhhhhhhhhhccccccccccccceEeeeHHHHHHcC-CCCCCCchhHHHHHHHHHHCCCcEEEeccce
Q 011596 363 QDINLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEDSG-GWMERTTVEDMDIAVRAHLRGWKFIFLNDVE 434 (482)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~iG-gf~~~~~~ED~~l~~rl~~~G~ki~~~~~~~ 434 (482)
. ..........-.+.|-+-+..|+.++++. .|.. .. -|..+-.--+++| +....|++-
T Consensus 149 -~----------~~~~~~lyrs~~fpg~GW~~~r~~W~el~~kwp~-~~-Wd~w~r~~~~rkg-r~cI~Pevs 207 (343)
T d1fo8a_ 149 -D----------SSKPELLYRTDFFPGLGWLLLAELWAELEPKWPK-AF-WDDWMRRPEQRKG-RACVRPEIS 207 (343)
T ss_dssp -C----------TTCTTCEEEESSCCCSSEEEEHHHHHHHGGGCCS-SC-HHHHHTSHHHHTT-CEEEEESSB
T ss_pred -c----------CCCCceEEeecCCCchhhheeHHHHHHhhhcCCC-CC-cHHhhhhHHhcCC-CeeeccCcc
Confidence 0 00000000111256778899999999874 3432 22 2222333356677 444445544
|
| >d1pzta_ c.68.1.2 (A:) beta 1,4 galactosyltransferase (b4GalT1) {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: beta 1,4 galactosyltransferase (b4GalT1) domain: beta 1,4 galactosyltransferase (b4GalT1) species: Cow (Bos taurus) [TaxId: 9913]
Probab=97.43 E-value=4.3e-05 Score=70.81 Aligned_cols=177 Identities=16% Similarity=0.197 Sum_probs=104.2
Q ss_pred CeEEEEeecCCchHHHHHHHHHHH---h-CCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCc
Q 011596 221 PMVLVQIPMCNEKEVYQQSIAAVC---N-LDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYK 296 (482)
Q Consensus 221 P~VsViIP~yne~~~l~~tL~Sll---~-q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~K 296 (482)
-+|+||||-+|.++.+...+..+. + |. ..++|+|++..++.. -+ +
T Consensus 49 ~kvaIIIPyRdR~~hL~~fl~~l~~~L~~q~---~~y~I~vieQ~~~~~-------------------------FN---R 97 (271)
T d1pzta_ 49 HKVAIIIPFRNRQEHLKYWLYYLHPILQRQQ---LDYGIYVINQAGESM-------------------------FN---R 97 (271)
T ss_dssp CEEEEEEEESSCHHHHHHHHHHHHHHHHHTT---CEEEEEEEEECSSSC-------------------------CC---H
T ss_pred ceEEEEEecCChHHHHHHHHHHHHHHHHhcC---CCEEEEEEeccCCcc-------------------------hh---h
Confidence 479999999999977775555443 3 32 247788888754321 12 4
Q ss_pred cccHHHHhhhcc-cCCceEEEEEcCCCCCChHHHHHHHHHhhcCCCeEEEeeeeeeecCCCChHHHHHhhhhhhhhhhhh
Q 011596 297 AGNLKSAMNCSY-VKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQ 375 (482)
Q Consensus 297 a~aln~al~~~~-~a~~d~Vl~lDaD~~~~pd~L~~lv~~f~~~p~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ 375 (482)
+..+|.|+..+. ..+.++++|-|-|..+..+.... . .++ .+.. ... . .....+.
T Consensus 98 g~llNiGf~~a~~~~~~~~~ifHDVDllP~~~~~~Y----~--~~~-----~p~h-~~~--~----~~~~~~~------- 152 (271)
T d1pzta_ 98 AKLLNVGFKEALKDYDYNCFVFSDVDLIPMNDHNTY----R--CFS-----QPRH-ISV--A----MDKFGFS------- 152 (271)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEEECTTEEESBTTSCC----S--CCS-----SCEE-CCC--E----EGGGTTS-------
T ss_pred hhhhhHHHHHhhhccCccEEEEecCCcCcccccccc----c--ccc-----cCcc-eee--e----ccccccc-------
Confidence 455676666431 34678899999999886554210 0 000 0000 000 0 0000000
Q ss_pred hhccccccccccccceEeeeHHHHHHcCCCCCC---CchhHHHHHHHHHHCCCcEEEeccce-----eccc-------CC
Q 011596 376 QVNGVFINFFGFNGTAGVWRIKALEDSGGWMER---TTVEDMDIAVRAHLRGWKFIFLNDVE-----CQCE-------LP 440 (482)
Q Consensus 376 ~~~~~~~~~~~~~G~~~~~Rr~~l~~iGgf~~~---~~~ED~~l~~rl~~~G~ki~~~~~~~-----~~~~-------~p 440 (482)
...-.+.|..++++++.|++++||+.. -..||-|+..|+..+|.++.-.+... ..+. .+
T Consensus 153 ------~~y~~~~GGv~~~~k~~f~kINGfsN~ywGWGgEDddl~~R~~~~g~~i~R~~~~~~~y~~l~H~~d~~~~~n~ 226 (271)
T d1pzta_ 153 ------LPYVQYFGGVSALSKQQFLSINGFPNNYWGAGGEDDDIYNRLAFRGMSVSRPNAVIGKTRMIRHSRDKKNEPNP 226 (271)
T ss_dssp ------CSCTTCCCSEEEEEHHHHHHTTSCCSCCCSSSSHHHHHHHHHHHTTCCCBCCCTTTTEEEECCCSSCCCCCCCC
T ss_pred ------cccccccceeeeecHHHHhhcCCCCccccCCccccHHHHHHHHHcCCeEEccCCCccccceeeccCCcccccch
Confidence 011124678889999999999999875 33599999999999999876543322 1111 12
Q ss_pred cCHHHHHHHHHhhhhhhHH
Q 011596 441 ESYEAYRKQQHRWHSGPMQ 459 (482)
Q Consensus 441 ~t~~~~~~qr~RW~~G~~q 459 (482)
..+....+.+.||....+.
T Consensus 227 ~r~~~l~~~~~~~~~dGLn 245 (271)
T d1pzta_ 227 QRFDRIAHTKETMLSDGLN 245 (271)
T ss_dssp CCCCCHHHHHHHTTTSSGG
T ss_pred HHHHHHHHHhhcccCCCCc
Confidence 2344556667777654433
|
| >d1v82a_ c.68.1.7 (A:) Beta-1,3-glucuronyltransferase 1, GlcAT-P {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: 1,3-glucuronyltransferase domain: Beta-1,3-glucuronyltransferase 1, GlcAT-P species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.03 E-value=0.063 Score=47.93 Aligned_cols=102 Identities=15% Similarity=0.167 Sum_probs=65.7
Q ss_pred CCeEEEEeecCCch---HHHHHHHHHHHhCCCCCCceEEEEEcCC--CCHHHHHHHHHHHHHhhhCCCeEEEEeccCCC-
Q 011596 220 FPMVLVQIPMCNEK---EVYQQSIAAVCNLDWPKSKILIQVLDDS--DDPTAQTLIKEEVLKWQEAGANIVYRHRILRD- 293 (482)
Q Consensus 220 ~P~VsViIP~yne~---~~l~~tL~Sll~q~yp~~~~~IiVvDds--sdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~- 293 (482)
+|.|-+|.|+|... ..|.+.-..+ ..- |+ +.-|||+|+ .++.+.++++ ..|+...+..-..+.
T Consensus 1 lp~I~vVTPTy~R~~Q~~~LtRLa~TL-~lV-p~--l~WIVVEda~~~t~~va~lL~-------~sgl~y~HL~~~~p~~ 69 (252)
T d1v82a_ 1 LPTIHVVTPTYSRPVQKAELTRMANTL-LHV-PN--LHWLVVEDAPRRTPLTARLLR-------DTGLNYTHLHVETPRN 69 (252)
T ss_dssp CCEEEEEEEECCSTTHHHHHHHHHHHH-TTC-SS--EEEEEEESSSSCCHHHHHHHH-------HHCCEEEEEECCCCHH
T ss_pred CCCEEEECCCCCchhhHHHHHHHHhHH-hcC-CC--ceEEEEeCCCCCCHHHHHHHH-------HcCCceEeeccCCCcc
Confidence 58899999999997 3444444444 333 65 667788874 4666777776 567766554322110
Q ss_pred ---------CC--c-cccHHHHhhhcc------cCCceEEEEEcCCCCCChHHHHHH
Q 011596 294 ---------GY--K-AGNLKSAMNCSY------VKDYEFVAIFDADFQPNPDFLRRT 332 (482)
Q Consensus 294 ---------g~--K-a~aln~al~~~~------~a~~d~Vl~lDaD~~~~pd~L~~l 332 (482)
.. + ....|.|++.+. ....-+|.|.|+|...+-+..++|
T Consensus 70 ~~~~~~~~~~~~~rg~~qRn~aL~~iR~~~~~~~~~~GVVyFADDdNtYsl~lFdem 126 (252)
T d1v82a_ 70 YKLRGDARDPRIPRGTMQRNLALRWLRETFPRNSSQPGVVYFADDDNTYSLELFEEM 126 (252)
T ss_dssp HHCCC-----CCCTTHHHHHHHHHHHHHHSCTTCCCCEEEEECCTTSEECHHHHHHH
T ss_pred cccccccccccccccHHHHHHHHHHHHHhcccccCcceEEEEecCCCcccHHHHHHH
Confidence 00 1 236788888652 122469999999999998887765
|
| >d3cu0a1 c.68.1.7 (A:75-335) 1,3-Glucuronyltransferase I (glcAT-I) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: 1,3-glucuronyltransferase domain: 1,3-Glucuronyltransferase I (glcAT-I) species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.71 E-value=0.3 Score=43.51 Aligned_cols=100 Identities=11% Similarity=0.111 Sum_probs=63.8
Q ss_pred eEEEEeecCCch---HHHHHHHHHHHhCCCCCCceEEEEEcCC--CCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCC-
Q 011596 222 MVLVQIPMCNEK---EVYQQSIAAVCNLDWPKSKILIQVLDDS--DDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGY- 295 (482)
Q Consensus 222 ~VsViIP~yne~---~~l~~tL~Sll~q~yp~~~~~IiVvDds--sdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~- 295 (482)
.|-||.|+|... ..|.+.-..+.. - |+ +.-|||+|+ .++.+.++++ ..|+...+..-..+...
T Consensus 2 TIyvVTPTY~R~~Q~a~LtRLa~TL~l-V-p~--l~WIVVEDa~~~t~~v~~lL~-------~sgl~y~HL~~~tp~~~~ 70 (261)
T d3cu0a1 2 TIYVVTPTYARLVQKAELVRLSQTLSL-V-PR--LHWLLVEDAEGPTPLVSGLLA-------ASGLLFTHLVVLTPKAQR 70 (261)
T ss_dssp EEEEEEEECCSTTHHHHHHHHHHHHTT-S-SS--EEEEEEESSSSCCHHHHHHHH-------HHCSEEEEEECCCC----
T ss_pred eEEEECCCCCCchhHHHHHHHHHHHhc-C-CC--eeEEEEECCCCCCHHHHHHHH-------HcCCceEEeecCCchhhc
Confidence 478999999997 344444444433 2 65 667788875 4566777776 56776665432211111
Q ss_pred -----------c-cccHHHHhhhccc--------------CCceEEEEEcCCCCCChHHHHHH
Q 011596 296 -----------K-AGNLKSAMNCSYV--------------KDYEFVAIFDADFQPNPDFLRRT 332 (482)
Q Consensus 296 -----------K-a~aln~al~~~~~--------------a~~d~Vl~lDaD~~~~pd~L~~l 332 (482)
+ ..+.|.|++.+.. ...-+|.|.|+|...+-+..++|
T Consensus 71 ~~~~~~~~~~prgv~qRn~aL~~ir~~~~~~~~~~~~~~~~~~GVVyFADDdNtYsl~LF~em 133 (261)
T d3cu0a1 71 LREGEPGWVHPRGVEQRNKALDWLRGRGGAVGGEKDPPPPGTQGVVYFADDDNTYSRELFEEM 133 (261)
T ss_dssp -------CCCCCSHHHHHHHHHHHTTCCCEEEECCSCCCTTCCEEEEECCTTSEECHHHHHHH
T ss_pred ccccCcccccccCHHHHHHHHHHHHHcccccccccccccCCCceEEEEecCCCcccHHHHHHH
Confidence 1 1367889887521 12479999999999998888775
|
| >d1qwja_ c.68.1.13 (A:) CMP acylneuraminate synthetase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: Cytidylytransferase domain: CMP acylneuraminate synthetase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=88.31 E-value=5.4 Score=33.48 Aligned_cols=109 Identities=13% Similarity=0.133 Sum_probs=67.8
Q ss_pred CeEEEEeecCCch--------------HHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEE
Q 011596 221 PMVLVQIPMCNEK--------------EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVY 286 (482)
Q Consensus 221 P~VsViIP~yne~--------------~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~ 286 (482)
|+|..+||+.... ..++-+++++....+=+ + |+|..| ++.+.+.+. ..++.++.
T Consensus 2 ~ki~aiIpaR~~S~Rlp~K~l~~i~gkpLi~~~i~~~~ks~~id-~--Iivstd--~~~i~~~~~-------~~~~~~~~ 69 (228)
T d1qwja_ 2 PHLAALVLARGGSKGIPLKNIKRLAGVPLIGWVLRAALDAGVFQ-S--VWVSTD--HDEIENVAK-------QFGAQVHR 69 (228)
T ss_dssp CCEEEEEECCSCCSSSSCTTTSEETTEEHHHHHHHHHHHHTCCS-E--EEEEES--CHHHHHHHH-------HTTCEEEE
T ss_pred CCEEEEeccCCCCCCCCCcchhhhCCeeHHHHHHHHHHhcCCcc-e--EEEecc--hhhhhhhhh-------hcCccccc
Confidence 6788889987433 47888898888766432 2 445443 445545444 45677654
Q ss_pred EeccCCCCCcccc---HHHHhhhcccCCceEEEEEcCCCCC-ChHHHHHHHHHhhcCCCeEEE
Q 011596 287 RHRILRDGYKAGN---LKSAMNCSYVKDYEFVAIFDADFQP-NPDFLRRTVPHFKDNEELGLV 345 (482)
Q Consensus 287 ~~~~~~~g~Ka~a---ln~al~~~~~a~~d~Vl~lDaD~~~-~pd~L~~lv~~f~~~p~v~~V 345 (482)
+. ....+..... +..++.. ....++++++.+|+-+ +++.+.+++..+..+ +.+.+
T Consensus 70 ~~-~~~~~~~~~~~~~i~~~~~~--~~~~~~iv~~~~~~P~~~~~~I~~~i~~~~~~-~~d~~ 128 (228)
T d1qwja_ 70 RS-SETSKDSSTSLDAIVEFLNY--HNEVDIVGNIQATSPCLHPTDLQKVAEMIREE-GYDSV 128 (228)
T ss_dssp CC-GGGSSTTCCHHHHHHHHHTT--CTTCSEEEEECTTCTTCCHHHHHHHHHHHHSS-CCSEE
T ss_pred cc-cccccccchhhhhhhhcccc--ccccceeeeecccccccCchhhhhhhhhhhcc-Ccccc
Confidence 42 2233323333 3334432 3468899999999844 899999999999753 44433
|
| >d1eyra_ c.68.1.13 (A:) CMP acylneuraminate synthetase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: Cytidylytransferase domain: CMP acylneuraminate synthetase species: Neisseria meningitidis [TaxId: 487]
Probab=85.97 E-value=4 Score=34.22 Aligned_cols=95 Identities=16% Similarity=0.156 Sum_probs=59.1
Q ss_pred CchHHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCcc---ccHHHHhhhc
Q 011596 231 NEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKA---GNLKSAMNCS 307 (482)
Q Consensus 231 ne~~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka---~aln~al~~~ 307 (482)
|....++-+++.+++..+-+ + |+|..| ++...++++ ..+..+..+... ..+... .....+++.
T Consensus 27 ~gkpLi~~~i~~~~~s~~~~-~--Iiv~td--~~~i~~i~~-------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~- 92 (225)
T d1eyra_ 27 NGISLLGHTINAAISSKCFD-R--IIVSTD--GGLIAEEAK-------NFGVEVVLRPAE-LASDTASSISGVIHALET- 92 (225)
T ss_dssp TTEEHHHHHHHHHHHHTCCS-E--EEEEES--CHHHHHHHH-------HTTCEEEECCHH-HHSTTCCHHHHHHHHHHH-
T ss_pred CCeEHHHHHHHHHHHcCCCc-e--EEEeec--cchhhhhhh-------hhcceeeeeccc-cccccccchhhccccccc-
Confidence 44468889999999877643 3 556554 444545444 456665543221 112122 223333332
Q ss_pred ccCCceEEEEEcCCCC-CChHHHHHHHHHhhcC
Q 011596 308 YVKDYEFVAIFDADFQ-PNPDFLRRTVPHFKDN 339 (482)
Q Consensus 308 ~~a~~d~Vl~lDaD~~-~~pd~L~~lv~~f~~~ 339 (482)
...+.|+|+.+.+|+- .++..+.+++..+..+
T Consensus 93 ~~~~~d~ii~~~~~~P~~~~~~I~~~i~~~~~~ 125 (225)
T d1eyra_ 93 IGSNSGTVTLLQPTSPLRTGAHIREAFSLFDEK 125 (225)
T ss_dssp HTCCSEEEEECCTTCTTCCHHHHHHHHTTCCTT
T ss_pred cccccceEEEeeccccccccccccccceeeccc
Confidence 2357899999999994 4899999999998753
|
| >d1vh1a_ c.68.1.13 (A:) CMP:2-keto-3-deoxy-manno-octonic acid (CMP-KDO)synthetase {Escherichia coli, KdsB [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: Cytidylytransferase domain: CMP:2-keto-3-deoxy-manno-octonic acid (CMP-KDO)synthetase species: Escherichia coli, KdsB [TaxId: 562]
Probab=81.91 E-value=13 Score=31.35 Aligned_cols=92 Identities=11% Similarity=0.159 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHhhhCCCeEEEEeccCCCCCccccHHHHhhhcccCCce
Q 011596 234 EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKDYE 313 (482)
Q Consensus 234 ~~l~~tL~Sll~q~yp~~~~~IiVvDdssdd~t~~~~~~~~~~~~~~~v~vv~~~~~~~~g~Ka~aln~al~~~~~a~~d 313 (482)
..+..+++.+..... ++ |+|.-| ++...+.++ ..+..+.++......+ ......++......+.+
T Consensus 27 pLI~~~i~~a~~s~i--~~--iiVsTd--~~~i~~~~~-------~~g~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 91 (246)
T d1vh1a_ 27 PMIVHVLERARESGA--ER--IIVATD--HEDVARAVE-------AAGGEVCMTRADHQSG--TERLAEVVEKCAFSDDT 91 (246)
T ss_dssp EHHHHHHHHHHHTTC--SE--EEEEES--CHHHHHHHH-------HTTCEEEECC-----C--HHHHHHHHHHTTCCTTC
T ss_pred cHHHHHHHHHHHcCC--Cc--EEEEec--Cccccchhh-------cccccceeeccccccc--chHHHHHHHhhcccccc
Confidence 588889998887653 23 445443 344434443 4567776553322233 22223333322346788
Q ss_pred EEEEEcCCCC-CChHHHHHHHHHhhcCC
Q 011596 314 FVAIFDADFQ-PNPDFLRRTVPHFKDNE 340 (482)
Q Consensus 314 ~Vl~lDaD~~-~~pd~L~~lv~~f~~~p 340 (482)
+++.+.+|.. .+|..+..++..+..++
T Consensus 92 ~i~~~~~d~pl~~~~~i~~~i~~~~~~~ 119 (246)
T d1vh1a_ 92 VIVNVQGDEPMIPATIIRQVADNLAQRQ 119 (246)
T ss_dssp EEEECCTTCTTCCHHHHHHHHHHHHHSS
T ss_pred eeeeeccccccchhhHHHHHhhhhcccc
Confidence 9999999985 48899999999887643
|