Citrus Sinensis ID: 011601

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-
Protein Sequence
MSHIMFQTTPVPTTAAKAVSSASSSSTLAAPRYSTSYPVGVRVRRKNMLITCSVPSPLIDGGDHSVVLLERCYKAPSALPSGSTAEYGPLMKGGQYGAFGAVTLEKGKLDTTQQQSETTPELATGGGGGDIGKKINHGGGDGGDDDGDDDDYFDDFDDGDEGDEGGLFRRRKILEELFDRKFVDAVLNEWMKTMMDLPAGFRQAYEMGLVSSAQMVKFLAINARPTTTRFISRSLPQGISRAFIGRMLADPSFLYKLILEQAATIGCTVLWELENRKERIKQEWDLALINVLTVTACNAFVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFERSYPFREFDLQKRIHSLFYKAAELCMVGLSAGAVQGSLSNYLAGKKDRLSVTIPSVSTSALERSRLAWLGVEADPLLQSDDLLKKAYNRPSQDVNGSTQKSPRWLISKNAIVSGLGLLGIKQGNVDSVEEEARAPKVRRKRIVRKKVTA
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccEEEEEEccccccccccccHHHHHHHHHcccccccccccccccccccccccccccEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHccHHHHHHHHHHHHHHccccHHHHHHHHHcccccHHHHHHHHHHcccccHHHHHHHHcccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHccEEEEEcccccccccccHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHccccccHHHHHHHHHHHHHccccccccccccccccEEEEcHHHHHcccccccccccccccccccccccHHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
cccEEEEcccccccccccccccccccccccccccccccccEEEEEEEEEEEEccccccEcccccHHHHHHHHHcccccccccccccccccccccccccccHEEHHHcccccHcccccccccEcccccccccccEcccccccccccccccccccccccccccccccccHEEEEEHHHHccHHHHHHHHHHHHccHHHccHHHHHHHHcccccHHHHHHHHHHHcccHHHHHHHHHccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHccccHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHcEEEEEEccccHHccHHHHHHHHccccccccccccccccEEEEccHEEHHHHHHccccccccccccccccccccHHHHHHHHHcc
Coil and Loop (DISEMBL)
mshimfqttpvpttAAKAVssasssstlaaprystsypvgvrvrrknmlitcsvpsplidggdhSVVLLERCykapsalpsgstaeygplmkggqygafgavtlekgkldttqqqsettpelatgggggdigkkinhgggdggdddgddddyfddfddgdegdegglFRRRKILEELFDRKFVDAVLNEWMKTMMDLPAGFRQAYEMGLVSSAQMVKFLAInarptttrfisrslpqgiSRAFIGRMLADPSFLYKLILEQAATIGCTVLWELENRKERIKQEWDLALINVLTVTACNAFVVwslapcrsygntfRFDLQNTLqklpnnifersypfrefdLQKRIHSLFYKAAELCMVGLSAGAVQGSLsnylagkkdrlsvtipsvstsaLERSRLAWlgveadpllqsddllkkaynrpsqdvngstqksprwlISKNAIVSGLGLlgikqgnvdsveeearapkvrrkrivrkkvta
Flexible Loop (DISEMBL)
MSHIMFQTTPVPTTAAKAVSsasssstlaaprystsypvgvrvrrKNMLITcsvpsplidgGDHSVVLLERCYKAPSALPSGSTAEYGPLMKGGQYGAFGAVTLEKGKLdttqqqsettpelatgggggdIGKKINHGGGDGGDDDGDDDDYFDDFDdgdegdeggLFRRRKILEELFDRKFVDAVLNEWMKTMMDLPAGFRQAYEMGLVSSAQMVKFLAINArptttrfisrslpQGISRAFIGRMLADPSFLYKLILEQAATIGCTVLWELENRKERIKQEWDLALINVLTVTACNAFVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFERSYPFREFDLQKRIHSLFYKAAELCMVGLSAGAVQGSLSNYlagkkdrlsvtIPSVSTSALERSRLAWLGVEADPLLQSDDLLKKAynrpsqdvngstqksprwlISKNAIVSGLGLLgikqgnvdsveeearapkvrrkrivrkkvta
Low Complexity Region (SEG)
MSHIMFQttpvpttaakavssasssstlaaPRYSTSYPVGVRVRRKNMLITCSVPSPLIDGGDHSVVLLERCYKAPSALPSGSTAEYGPLMKGGQYGAFGAVTLEKGKLDTTQQQSETTPELATgggggdigkkinhgggdggdddgddddyfddfddgdegdeggLFRRRKILEELFDRKFVDAVLNEWMKTMMDLPAGFRQAYEMGLVSSAQMVKFLAINARPTTTRFISRSLPQGISRAFIGRMLADPSFLYKLILEQAATIGCTVLWELENRKERIKQEWDLALINVLTVTACNAFVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFERSYPFREFDLQKRIHSLFYKAAELCMVGLSAGAVQGSLSNYLAGKKDRLSVTIPSVSTSALERSRLAWLGVEADPLLQSDDLLKKAYNRPSQDVNGSTQKSPRWLISKNAIVSGLGLLGIKQGNVDSVEEEARAPkvrrkrivrkkvTA
Disordered region (IsUnstruct)
**********************************TSYPVGVRVRRKNMLITCSVPSPLIDGGDHSVVLLERCYKAPS*********YGPLMKGGQYGAFGAVTL*************************************************************GLFRRRKILEELFDRKFVDAVLNEWMKTMMDLPAGFRQAYEMGLVSSAQMVKFLAINARPTTTRFISRSLPQGISRAFIGRMLADPSFLYKLILEQAATIGCTVLWELENRKERIKQEWDLALINVLTVTACNAFVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFERSYPFREFDLQKRIHSLFYKAAELCMVGLSAGAVQGSLSNYLAGKKDRLSVTIPSVSTSALERSRLAWLGVEADPLL*************************RWLISKNAIVSGLGLLGIKQ***************************
Disordered Region (DISOPRED)
********TPVP*************STLAAPRYSTSY*******************************LERCY**********************YGAFGAVTLE*****************************************GDDDDYFDDFDDGDEGDEGGLFRRRKILEELFDRKFVDAVLNEWMKTMMDLPAGFRQAYEMGLVSSAQMVKFLAINARPTTTRFISRSLPQGISRAFIGRMLADPSFLYKLILEQAATIGCTVLWELENRKERIKQEWDLALINVLTVTACNAFVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFERSYPFREFDLQKRIHSLFYKAAELCMVGLSAGAVQGSLSNYLAGKKDRLSVTIPSVSTSALERSRLAWLGVEADPLLQSDDLLKKAYNRPSQD******KSPRWLISKNAIVSGLGL*************************VRKK***
Disordered Region (DISEMBL)
MSHIMFQTTP*********************RYSTSYPVGVRVRRKNMLITCSVPSPLIDGGDHSVVLLERCYKAPSALPSGSTAEYGPLMKGGQYGAFGAVTLEKGK******************GGGDIGKKINHGGGDGGDDDGDDDDYFDDFDDGDEGDEGGLFRRRKILEELFDRKFVDAVLNEWMKTMMDLPAGFRQAYEMGLVSSAQMVKFLAINARPTTTRFISRSLPQGISRAFIGRMLADPSFLYKLILEQAATIGCTVLWELENRKERIKQEWDLALINVLTVTACNAFVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFERSYPFREFDLQKRIHSLFYKAAELCMVGLSAGAVQGSLSNYLAGKKDRLSVTIPSVSTSALERSRLAWLGVEADPLLQSDDLLKKAYNR***********SPRWLISKNAIVSGLGLLGIKQGNV************************
Disordered Region (DISPRO)
****MFQTTPVPTTAAKAVSSASSSSTLAAPRYSTSYPVGVRVRRKNMLITCSVPSPLIDGGDHSVVLLERCYKAP**************************T**K*KLDTTQQQSETTPELATGGGGGDIGKKINHGGGDGGDDDGDDDDYFDDFDDGDEGDEGGLFRRRKILEELFDRKFVDAVLNEWMKTMMDLPAGFRQAYEMGLVSSAQMVKFLAINARPTTTRFISRSLPQGISRAFIGRMLADPSFLYKLILEQAATIGCTVLWELENRKERIKQEWDLALINVLTVTACNAFVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFERSYPFREFDLQKRIHSLFYKAAELCMVGLSAGAVQGSLSNYLAGKKDRLSVTIPSVSTSALERSRLAWLGVEADPLLQSDDLLKKAYNRPSQDVNGSTQKSPRWLISKNAIVSGLGLLGIKQ***************************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSHIMFQTTPVPTTAAKAVSSASSSSTLAAPRYSTSYPVGVRVRRKNMLITCSVPSPLIDGGDHSVVLLERCYKAPSALPSGSTAEYGPLMKGGQYGAFGAVTLEKGKLDTTQQQSETTPELATGGGGGDIGKKINHGGGDGGDDDGDDDDYFDDFDDGDEGDEGGLFRRRKILEELFDRKFVDAVLNEWMKTMMDLPAGFRQAYEMGLVSSAQMVKFLAINARPTTTRFISRSLPQGISRAFIGRMLADPSFLYKLILEQAATIGCTVLWELENRKERIKQEWDLALINVLTVTACNAFVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFERSYPFREFDLQKRIHSLFYKAAELCMVGLSAGAVQGSLSNYLAGKKDRLSVTIPSVSTSALERSRLAWLGVEADPLLQSDDLLKKAYNRPSQDVNGSTQKSPRWLISKNAIVSGLGLLGIKQGNVDSVEEEARAPKVRRKRIVRKKVTA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	481
224070482	527	predicted protein [Populus trichocarpa]	0.945	0.863	0.664	1e-163
449444691	534	PREDICTED: uncharacterized protein LOC10	0.943	0.850	0.637	1e-156
225448041	531	PREDICTED: uncharacterized protein LOC10	0.979	0.887	0.647	1e-155
224054268	531	predicted protein [Populus trichocarpa]	0.846	0.766	0.701	1e-155
298204572	440	unnamed protein product [Vitis vinifera]	0.796	0.870	0.721	1e-150
356558509	523	PREDICTED: uncharacterized protein LOC10	0.844	0.776	0.688	1e-150
356525946	519	PREDICTED: uncharacterized protein LOC10	0.844	0.782	0.688	1e-149
297812665	520	hypothetical protein ARALYDRAFT_910514 [	0.943	0.873	0.606	1e-147
22327037	521	uncharacterized protein [Arabidopsis tha	0.952	0.879	0.608	1e-146
110741268	521	hypothetical protein [Arabidopsis thalia	0.952	0.879	0.606	1e-146

>gi|224070482|ref|XP_002303156.1| predicted protein [Populus trichocarpa] gi|222840588|gb|EEE78135.1| predicted protein [Populus trichocarpa]

 Score =  580 bits (1494), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 345/519 (66%), Positives = 391/519 (75%), Gaps = 64/519 (12%)

Query: 1   MSHIMFQTTPVPTTAAKAVSSASSSSTLAAPRYSTSYPVGVRVR-RKNMLITCSVPS--P 57
           M H + QT  +PT   K  ++ S   T   P+      +  RVR  +N+ + CS  S  P
Sbjct: 1   MPHFVLQTAQIPTPTTK--TTLSLKPTFPIPQLCH---LRRRVRSNRNLDLKCSSSSSCP 55

Query: 58  LIDGGDHSVVLLERCYKAPSALPSGSTAEYGPLMKGGQYGAFGAVTLEKGKLDTTQQQSE 117
           +IDGG  SV  LERC+ AP   P+    ++GP+MKG ++G+ GAVTLEKGKLD +Q+QS+
Sbjct: 56  MIDGGGDSVAALERCFSAP---PAPVVGDFGPVMKG-KFGSLGAVTLEKGKLDMSQKQSQ 111

Query: 118 TTPELATGGGGGDIGKKINHGGGDGGDDDGDDDDYFDDFDDGDEGDEGGLFRRRKILEEL 177
           +TPE+A GGGGGDIGK INHGGGDGGDDDGDDDDYFDDFDDGDEGDEGGLFRRR  LEEL
Sbjct: 112 STPEVALGGGGGDIGKHINHGGGDGGDDDGDDDDYFDDFDDGDEGDEGGLFRRRIFLEEL 171

Query: 178 FDRKFVDAVLNEWMKTMMDLPAGFRQAYEMGLVSSAQMVKFLAINARPTTTRFISRSLPQ 237
           +DRKFVDAVLNEW KTMMDLPAGFRQAYEMGLVSSAQMVKFLAINARPTTTRFISR+LPQ
Sbjct: 172 YDRKFVDAVLNEWHKTMMDLPAGFRQAYEMGLVSSAQMVKFLAINARPTTTRFISRALPQ 231

Query: 238 GISRAFIGRMLADPSFLYKLILEQAATIGCTVLWELENRKERIKQEWDLALINVLTVTAC 297
            ISRAFIGRM+ADP+FLY+L+LEQAAT+GC+V WEL+NRK+RIKQEWDLALINVLTVTAC
Sbjct: 232 AISRAFIGRMIADPAFLYRLLLEQAATVGCSVWWELKNRKDRIKQEWDLALINVLTVTAC 291

Query: 298 NAFVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFERSYPFREFDLQKRIHSLFYKAAELC 357
           NA VVWSLAPCRSYGNTF+FDLQNTLQKLPNNIFE+SYP REFDLQKRIHS FYKAAELC
Sbjct: 292 NALVVWSLAPCRSYGNTFQFDLQNTLQKLPNNIFEKSYPLREFDLQKRIHSFFYKAAELC 351

Query: 358 MVGLSAGAVQGSLSNYLAGKKDRLSVTIPSVSTSAL------------------------ 393
           MVGL+AGA+QGSL+N LA KKDRLSVTIP VST AL                        
Sbjct: 352 MVGLTAGAMQGSLTNLLARKKDRLSVTIPPVSTYALGYGAFLGLYANLRYQLLCGIDRAV 411

Query: 394 -------------------------ERSRLAWLGVEADPLLQSDDLLKKAYNRPSQDVNG 428
                                    E SRLAWLG+E DPL+QSDDLL KAYNR S     
Sbjct: 412 VNHFDVIGVALVFSTALRILNAQVGETSRLAWLGLEPDPLVQSDDLL-KAYNRSSS--GD 468

Query: 429 STQKSPRWLISKNAIVSGLGLLGIKQGNVDSVEEEARAP 467
           +T+ S +W ISK A+VSGLGLLGIKQGN DS+  E+ AP
Sbjct: 469 ATESSSKWFISKKALVSGLGLLGIKQGNADSIIGESPAP 507

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449444691|ref|XP_004140107.1| PREDICTED: uncharacterized protein LOC101205574 [Cucumis sativus] gi|449490489|ref|XP_004158620.1| PREDICTED: uncharacterized LOC101205574 [Cucumis sativus]

 Score =  557 bits (1436), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 339/532 (63%), Positives = 394/532 (74%), Gaps = 78/532 (14%)

Query: 1   MSHIMFQTTPVPTTAAKAVSSASSSSTLAAPRYSTSYPVGVRVRRKNMLITCSVPSPL-- 58
           MSH +FQT  +       +++  +++ L  P       +G   R + +L+  +  +    
Sbjct: 1   MSHAVFQTAQI-----MPINTQLTTNNLWLP---AVVKLGPSYRNRAVLVVKAFTASPPS 52

Query: 59  -----IDGGDHSVVLLERCYKAPSALPSG-------STAEYGPLMKGGQYGAFGAVTLEK 106
                +  GD S+  LERC++  S  P+G       S++ +GP+MKG +YGAFGAVTLEK
Sbjct: 53  SSSSGVSYGD-SISFLERCFET-SFPPAGVDPSLAVSSSSFGPVMKG-KYGAFGAVTLEK 109

Query: 107 GKLDTTQQQSETTPELATGGGGGDIGKKINHGGGDGGDDDGDDDDYFDDFDDGDEGDEGG 166
            KLD +Q+QS+++PELA GGGGGDIGKKINHGGGDGGDDDGDDDDY+D+FDDGDEGDEGG
Sbjct: 110 SKLDLSQKQSKSSPELAIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGG 169

Query: 167 LFRRRKILEELFDRKFVDAVLNEWMKTMMDLPAGFRQAYEMGLVSSAQMVKFLAINARPT 226
           LFRRRK LEELFDRKFVDAVLNEW KTMMDLPAGFRQAYEMGLVSSAQMV+FLA+NARPT
Sbjct: 170 LFRRRKFLEELFDRKFVDAVLNEWQKTMMDLPAGFRQAYEMGLVSSAQMVRFLAVNARPT 229

Query: 227 TTRFISRSLPQGISRAFIGRMLADPSFLYKLILEQAATIGCTVLWELENRKERIKQEWDL 286
           TTRFISRSLPQGISRAFIGRMLADPSFLYKL+LEQAATIGC   WE++NRK+RIKQEWDL
Sbjct: 230 TTRFISRSLPQGISRAFIGRMLADPSFLYKLLLEQAATIGCAAWWEIKNRKDRIKQEWDL 289

Query: 287 ALINVLTVTACNAFVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFERSYPFREFDLQKRI 346
           ALINVLTVTACNA VVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFE+SYP REFDLQKRI
Sbjct: 290 ALINVLTVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRI 349

Query: 347 HSLFYKAAELCMVGLSAGAVQGSLSNYLAGKK-DRLSVTIPSVSTSAL------------ 393
           HS FYKAAELCMVG++AGA QG LSN+L+ KK +RLSV++P+VST+AL            
Sbjct: 350 HSFFYKAAELCMVGITAGAAQGVLSNFLSSKKQERLSVSVPTVSTNALGYGAFLGLYANL 409

Query: 394 -------------------------------------ERSRLAWLGVEADPLLQSDDLLK 416
                                                ERSRLAWLG+EADPL+QS +LL+
Sbjct: 410 RYQLLCGFDRAMINHFDVIGVALFLSSAMRVLNVQLGERSRLAWLGIEADPLVQSRELLE 469

Query: 417 KAYNRPSQDVNGSTQKSPRWLISKNAIVSGLGLLGIKQGNVDSVEEEARAPK 468
           K YNRPSQ   G +Q S +W ISKNAI+SGLGLLG+KQ  VDSV E    PK
Sbjct: 470 KVYNRPSQ---GVSQSSSKWFISKNAIISGLGLLGLKQSGVDSVSEGESVPK 518

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225448041|ref|XP_002273537.1| PREDICTED: uncharacterized protein LOC100246257 [Vitis vinifera]

 Score =  555 bits (1429), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 347/536 (64%), Positives = 394/536 (73%), Gaps = 65/536 (12%)

Query: 1   MSHIMFQTTPVPTTAAKAVSSASSSSTLAAPRYSTSYPVGVRV----RRKNMLITCSVPS 56
           MSH +F    +P    K + S  S+  L     S+  P         +R+++ +  S  S
Sbjct: 1   MSHSVFAPQIMPVAPTKTIYS--SNPLLPIHTLSSLRPAAASASAFAKRRSLAVRAS-SS 57

Query: 57  PLIDGGDHSVVLLERCYKAPSALPSGSTAEYGPL-MKGGQYGAFGAVTLEKGKLDTTQQQ 115
            L+DG   SV LLERC+ A SA    S+A   PL +  G+YG+FGAVTLEK KLD +Q+Q
Sbjct: 58  ALVDG--DSVALLERCFLADSASVPSSSASAMPLPVMKGKYGSFGAVTLEKSKLDLSQKQ 115

Query: 116 SETTPELATGGGGGDIGKKINHGGGDGGDDDGDDDDYFDDFDDGDEGDEGGLFRRRKILE 175
           S  +PE A GGGGGDIGK+IN+GGGDGGDDDGDDDDYFDDFDDGDEGDEGGLFRRR +LE
Sbjct: 116 SRLSPETAIGGGGGDIGKRINNGGGDGGDDDGDDDDYFDDFDDGDEGDEGGLFRRRLVLE 175

Query: 176 ELFDRKFVDAVLNEWMKTMMDLPAGFRQAYEMGLVSSAQMVKFLAINARPTTTRFISRSL 235
           ELFDRKFVDAVLNEW KTMMDLPAG RQAYEMGLVSSAQMVKFLAINARPTT RFISR+L
Sbjct: 176 ELFDRKFVDAVLNEWQKTMMDLPAGLRQAYEMGLVSSAQMVKFLAINARPTTARFISRTL 235

Query: 236 PQGISRAFIGRMLADPSFLYKLILEQAATIGCTVLWELENRKERIKQEWDLALINVLTVT 295
           PQG+SRAFIGRM+ADP+F Y+L+LEQ  TIGC+V WEL+NRKERIKQEWDLALINVLTV+
Sbjct: 236 PQGMSRAFIGRMIADPAFAYRLLLEQVTTIGCSVWWELKNRKERIKQEWDLALINVLTVS 295

Query: 296 ACNAFVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFERSYPFREFDLQKRIHSLFYKAAE 355
           ACNA VVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFE+SYP REFDLQKRIHS FYKAAE
Sbjct: 296 ACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPLREFDLQKRIHSFFYKAAE 355

Query: 356 LCMVGLSAGAVQGSLSNYLAG-KKDRLSVTIPSVSTSAL--------------------- 393
            CMVGL+AGA QG+L+N+ A  KKDRLSVTIP+VST+AL                     
Sbjct: 356 FCMVGLTAGAAQGALTNFAASKKKDRLSVTIPTVSTNALGYGAFLGLYANLRYQLLCGVD 415

Query: 394 ----------------------------ERSRLAWLGVEADPLLQSDDLLKKAYNRPSQD 425
                                       E SRLAWLGVEADPL QSD+LL KAYNRPS+ 
Sbjct: 416 RVMINHFDVIGVALFFSTALRILNVQLGETSRLAWLGVEADPLAQSDNLL-KAYNRPSE- 473

Query: 426 VNGSTQKSPRWLISKNAIVSGLGLLGIKQGNVDSV-EEEARAPKVRRKRIVRKKVT 480
             G+ + S +W ISK AIVSGLGLLGIKQG  DSV  +E+  PK RRKR++RKKVT
Sbjct: 474 --GAAESSSKWFISKKAIVSGLGLLGIKQGTGDSVANQESSPPKARRKRVIRKKVT 527

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224054268|ref|XP_002298175.1| predicted protein [Populus trichocarpa] gi|222845433|gb|EEE82980.1| predicted protein [Populus trichocarpa]

 Score =  554 bits (1427), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 324/462 (70%), Positives = 362/462 (78%), Gaps = 55/462 (11%)

Query: 57  PLIDGGDHSVVLLERCYKAPSA--LPSGSTAEYGPLMKGGQYGAFGAVTLEKGKLDTTQQ 114
           P IDGG  SV  LERC+ APSA  + S    ++GP+MKG ++G+ GAVTLEK KLD TQ+
Sbjct: 59  PTIDGGGDSVAGLERCFLAPSAPVVNSSPKGDFGPVMKG-KFGSLGAVTLEKSKLDLTQK 117

Query: 115 QSETTPELATGGGGGDIGKKINHGGGDGGDDDGDDDDYFDDFDDGDEGDEGGLFRRRKIL 174
           QS++TPE+A GGGGGDIGK INHGGGDGGDDDGDDDDYFDDFDDGDEGDEGGLFRRR  L
Sbjct: 118 QSQSTPEVALGGGGGDIGKHINHGGGDGGDDDGDDDDYFDDFDDGDEGDEGGLFRRRMFL 177

Query: 175 EELFDRKFVDAVLNEWMKTMMDLPAGFRQAYEMGLVSSAQMVKFLAINARPTTTRFISRS 234
           EELFDRKFVDAVLNEW KT+MDLPAGFRQAYEMGLVSSAQMVKFLAINARPT+TRFISR+
Sbjct: 178 EELFDRKFVDAVLNEWHKTVMDLPAGFRQAYEMGLVSSAQMVKFLAINARPTSTRFISRA 237

Query: 235 LPQGISRAFIGRMLADPSFLYKLILEQAATIGCTVLWELENRKERIKQEWDLALINVLTV 294
           LP+ +SRAFIGRMLADP+FLY+L+LEQAATIGC+V WEL+NRK+RIKQEWDLALINVLT+
Sbjct: 238 LPEAVSRAFIGRMLADPAFLYRLLLEQAATIGCSVWWELKNRKDRIKQEWDLALINVLTI 297

Query: 295 TACNAFVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFERSYPFREFDLQKRIHSLFYKAA 354
           TACNAFVVW+LAPCRSYGNTF+FDLQNTLQKLPNNIFE SYP REFDLQKR+HS FYKAA
Sbjct: 298 TACNAFVVWTLAPCRSYGNTFQFDLQNTLQKLPNNIFEMSYPLREFDLQKRVHSFFYKAA 357

Query: 355 ELCMVGLSAGAVQGSLSNYLAGKKDRLSVTIPSVSTSAL--------------------- 393
           ELC+VGL+AGA+QGSL+N LA KKDRLSVT+P VST AL                     
Sbjct: 358 ELCLVGLTAGAIQGSLTNTLARKKDRLSVTVPPVSTYALGYGAFLGLYANLRYQLLCGFD 417

Query: 394 ----------------------------ERSRLAWLGVEADPLLQSDDLLKKAYNRPSQD 425
                                       E SRLAWLGVEADPL+QSDDLL KAYNR    
Sbjct: 418 RAVVNHFDVIGVALFFSTALRILNTQVGETSRLAWLGVEADPLVQSDDLL-KAYNRSPSA 476

Query: 426 VNGSTQKSPRWLISKNAIVSGLGLLGIKQGNVDSVEEEARAP 467
              +   S +W ISK  +VSGLGLLGIKQGN DS+  E+ AP
Sbjct: 477 D--ADSSSSKWFISKKTLVSGLGLLGIKQGNTDSINGESPAP 516

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|298204572|emb|CBI23847.3| unnamed protein product [Vitis vinifera]

 Score =  538 bits (1385), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 316/438 (72%), Positives = 349/438 (79%), Gaps = 55/438 (12%)

Query: 94  GQYGAFGAVTLEKGKLDTTQQQSETTPELATGGGGGDIGKKINHGGGDGGDDDGDDDDYF 153
           G+YG+FGAVTLEK KLD +Q+QS  +PE A GGGGGDIGK+IN+GGGDGGDDDGDDDDYF
Sbjct: 3   GKYGSFGAVTLEKSKLDLSQKQSRLSPETAIGGGGGDIGKRINNGGGDGGDDDGDDDDYF 62

Query: 154 DDFDDGDEGDEGGLFRRRKILEELFDRKFVDAVLNEWMKTMMDLPAGFRQAYEMGLVSSA 213
           DDFDDGDEGDEGGLFRRR +LEELFDRKFVDAVLNEW KTMMDLPAG RQAYEMGLVSSA
Sbjct: 63  DDFDDGDEGDEGGLFRRRLVLEELFDRKFVDAVLNEWQKTMMDLPAGLRQAYEMGLVSSA 122

Query: 214 QMVKFLAINARPTTTRFISRSLPQGISRAFIGRMLADPSFLYKLILEQAATIGCTVLWEL 273
           QMVKFLAINARPTT RFISR+LPQG+SRAFIGRM+ADP+F Y+L+LEQ  TIGC+V WEL
Sbjct: 123 QMVKFLAINARPTTARFISRTLPQGMSRAFIGRMIADPAFAYRLLLEQVTTIGCSVWWEL 182

Query: 274 ENRKERIKQEWDLALINVLTVTACNAFVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFER 333
           +NRKERIKQEWDLALINVLTV+ACNA VVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFE+
Sbjct: 183 KNRKERIKQEWDLALINVLTVSACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEK 242

Query: 334 SYPFREFDLQKRIHSLFYKAAELCMVGLSAGAVQGSLSNYLAG-KKDRLSVTIPSVSTSA 392
           SYP REFDLQKRIHS FYKAAE CMVGL+AGA QG+L+N+ A  KKDRLSVTIP+VST+A
Sbjct: 243 SYPLREFDLQKRIHSFFYKAAEFCMVGLTAGAAQGALTNFAASKKKDRLSVTIPTVSTNA 302

Query: 393 L-------------------------------------------------ERSRLAWLGV 403
           L                                                 E SRLAWLGV
Sbjct: 303 LGYGAFLGLYANLRYQLLCGVDRVMINHFDVIGVALFFSTALRILNVQLGETSRLAWLGV 362

Query: 404 EADPLLQSDDLLKKAYNRPSQDVNGSTQKSPRWLISKNAIVSGLGLLGIKQGNVDSV-EE 462
           EADPL QSD+LL KAYNRPS+   G+ + S +W ISK AIVSGLGLLGIKQG  DSV  +
Sbjct: 363 EADPLAQSDNLL-KAYNRPSE---GAAESSSKWFISKKAIVSGLGLLGIKQGTGDSVANQ 418

Query: 463 EARAPKVRRKRIVRKKVT 480
           E+  PK RRKR++RKKVT
Sbjct: 419 ESSPPKARRKRVIRKKVT 436

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356558509|ref|XP_003547548.1| PREDICTED: uncharacterized protein LOC100783760 [Glycine max]

 Score =  536 bits (1381), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 323/469 (68%), Positives = 360/469 (76%), Gaps = 63/469 (13%)

Query: 65  SVVLLERCYKAP--SALPSGSTAEYGPLMKGGQYGAFGAVTLEKGKLDTTQQQSETTPEL 122
           S V LERC+ AP  S LPS S       MKGGQYGAFGAVTLEK KLD +Q+Q+  +PEL
Sbjct: 63  STVHLERCFNAPVSSHLPSIS-------MKGGQYGAFGAVTLEKSKLDLSQKQTSFSPEL 115

Query: 123 ATGGGGGDIGKKINHGGGDGGDDDGDDDDYFDDFDDGDEGDEGGLFRRRKILEELFDRKF 182
             GGGGGDIGKKINHGGGDGGDDDGDDDDYFDDFDDGDEGDEGGLFRRR + EELFDRKF
Sbjct: 116 DIGGGGGDIGKKINHGGGDGGDDDGDDDDYFDDFDDGDEGDEGGLFRRRILFEELFDRKF 175

Query: 183 VDAVLNEWMKTMMDLPAGFRQAYEMGLVSSAQMVKFLAINARPTTTRFISRSLPQGISRA 242
           VDAVLNEW KTMMDLPAG RQAYEMGLVSSAQMVKFLAINARPTT+RFISR+LPQ +SR+
Sbjct: 176 VDAVLNEWQKTMMDLPAGLRQAYEMGLVSSAQMVKFLAINARPTTSRFISRTLPQALSRS 235

Query: 243 FIGRMLADPSFLYKLILEQAATIGCTVLWELENRKERIKQEWDLALINVLTVTACNAFVV 302
           FIGR+LADP+FLY+ +LE+AAT+GC++ WE++NRK+RIKQEWDLAL+NV+T  ACNA VV
Sbjct: 236 FIGRLLADPAFLYRFLLEEAATVGCSLWWEIKNRKDRIKQEWDLALMNVMTAAACNALVV 295

Query: 303 WSLAPCRSYGNTFRFDLQNTLQKLPNNIFERSYPFREFDLQKRIHSLFYKAAELCMVGLS 362
           WSLAPCRSYGNTFRFDLQNTLQKLPNNIFE+SYP REFD+QKRI    +KAAELCMVGLS
Sbjct: 296 WSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPLREFDMQKRIQCFLFKAAELCMVGLS 355

Query: 363 AGAVQGSLSNYLAGKKD-RLSVTIPSVSTSAL---------------------------- 393
           AGAVQG+LSN LA KK+ RLSVT+PSVS++AL                            
Sbjct: 356 AGAVQGALSNSLASKKEGRLSVTVPSVSSNALGYGAFLGIYANLRYQLLCGFDRAMMTHF 415

Query: 394 ---------------------ERSRLAWLGVEADPLLQSDDLLKKAYNRPSQDVNGSTQK 432
                                E S+ AWLGVEADPL QSDDLL K YNR S++V  S+ K
Sbjct: 416 DVIGVALFFSTTFRILNVQLGETSKRAWLGVEADPLAQSDDLL-KVYNRTSENVEKSSSK 474

Query: 433 SPRWLISKNAIVSGLGLLGIKQGNVDSVEEEARAPKVRRKRIVRKKVTA 481
              W ISKNA+VSGLGLLGIKQ N D    E+ APK RRKRIVRKKV A
Sbjct: 475 ---WFISKNAVVSGLGLLGIKQRNTDGSGAESSAPKTRRKRIVRKKVAA 520

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356525946|ref|XP_003531582.1| PREDICTED: uncharacterized protein LOC100805854 [Glycine max]

 Score =  536 bits (1381), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 323/469 (68%), Positives = 360/469 (76%), Gaps = 63/469 (13%)

Query: 65  SVVLLERCYKAP--SALPSGSTAEYGPLMKGGQYGAFGAVTLEKGKLDTTQQQSETTPEL 122
           S V LERC+ AP  S LPS S       MKGGQYGAFGAVTLEK KLD +Q+Q+ ++PEL
Sbjct: 59  STVHLERCFNAPVASHLPSIS-------MKGGQYGAFGAVTLEKSKLDMSQKQTRSSPEL 111

Query: 123 ATGGGGGDIGKKINHGGGDGGDDDGDDDDYFDDFDDGDEGDEGGLFRRRKILEELFDRKF 182
             GGGGGDIGKKINHGGGDGGDDDGDDDDYFDDFDDGDEGDEGGLFRRR + EELFDRKF
Sbjct: 112 DIGGGGGDIGKKINHGGGDGGDDDGDDDDYFDDFDDGDEGDEGGLFRRRILFEELFDRKF 171

Query: 183 VDAVLNEWMKTMMDLPAGFRQAYEMGLVSSAQMVKFLAINARPTTTRFISRSLPQGISRA 242
           VDAVLNEW KTMMDLPAG RQAYEMGLVSSAQMVKFLAINARPTT+RFISR+LPQ +SR+
Sbjct: 172 VDAVLNEWQKTMMDLPAGLRQAYEMGLVSSAQMVKFLAINARPTTSRFISRTLPQALSRS 231

Query: 243 FIGRMLADPSFLYKLILEQAATIGCTVLWELENRKERIKQEWDLALINVLTVTACNAFVV 302
           FIGR+LADP+FLY+ +LE+AAT+GC++ WE++ RK+RIKQEWDLAL+NV+T  ACNA VV
Sbjct: 232 FIGRLLADPAFLYRFLLEEAATVGCSLWWEIKTRKDRIKQEWDLALMNVMTAAACNALVV 291

Query: 303 WSLAPCRSYGNTFRFDLQNTLQKLPNNIFERSYPFREFDLQKRIHSLFYKAAELCMVGLS 362
           WSLAPCRSYGNTFRFDLQNTLQKLPNNIFE+SYP REFDLQKRI    +KAAELCMVGLS
Sbjct: 292 WSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPLREFDLQKRIQCFLFKAAELCMVGLS 351

Query: 363 AGAVQGSLSNYLAGKKD-RLSVTIPSVSTSAL---------------------------- 393
           AGAVQG+LSN LA KK+ RLSVT+PSVS++AL                            
Sbjct: 352 AGAVQGALSNSLASKKEGRLSVTVPSVSSNALGYGAFLGIYANLRYQLLCGFDRAMMTHF 411

Query: 394 ---------------------ERSRLAWLGVEADPLLQSDDLLKKAYNRPSQDVNGSTQK 432
                                E S+ AWLGVEADPL QSDDLL K YNR S++V  S+ K
Sbjct: 412 DVIGVALFFSTAFRVLNVQLGETSKRAWLGVEADPLAQSDDLL-KVYNRTSENVEKSSSK 470

Query: 433 SPRWLISKNAIVSGLGLLGIKQGNVDSVEEEARAPKVRRKRIVRKKVTA 481
              W ISKNA+VSGLGLLGIKQ N D    E+ APK RRKRIVRKKV A
Sbjct: 471 ---WFISKNAVVSGLGLLGIKQRNADGSGSESSAPKSRRKRIVRKKVAA 516

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297812665|ref|XP_002874216.1| hypothetical protein ARALYDRAFT_910514 [Arabidopsis lyrata subsp. lyrata] gi|297320053|gb|EFH50475.1| hypothetical protein ARALYDRAFT_910514 [Arabidopsis lyrata subsp. lyrata]

 Score =  526 bits (1355), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 330/544 (60%), Positives = 384/544 (70%), Gaps = 90/544 (16%)

Query: 1   MSHIMFQTT--PVPTTAAKAVSSASSSSTLAAPRYSTSYPVGVR---VRRKNMLITCSVP 55
           MSH++FQ+   P P +  K          L  PR   + P  +R   VR  +  +     
Sbjct: 1   MSHMVFQSVVAPKPLSPLK--------PCLPIPRPLVTLPCKLRRGFVRASSSFLV---- 48

Query: 56  SPLIDGGDHSVVLLERCYKAPSALPSG--------STAEYGPLMKGGQYGAFGAVTLEKG 107
                  D SV  LERC + PS +  G        ++ +  P+MKG ++G+ GAVTLEKG
Sbjct: 49  -------DDSVSGLERCLQLPSGVELGPSSSGSFSASTQMCPVMKG-KFGSVGAVTLEKG 100

Query: 108 KLDTTQQQSETTPELATGGGGGDIGKKINHGGGDGGDDDGDDDDYFDDFDDGDEGDEGGL 167
           KLD TQ+ SET+PE+ATGGGGG+IGK IN+GGGDGGDD+GDDDDYFD+FDDGDEGD+ GL
Sbjct: 101 KLDMTQKISETSPEIATGGGGGNIGKSINNGGGDGGDDNGDDDDYFDEFDDGDEGDDDGL 160

Query: 168 FRRRKILEELFDRKFVDAVLNEWMKTMMDLPAGFRQAYEMGLVSSAQMVKFLAINARPTT 227
           FRRR  L E+FDRKFVDAVLNEW KTMMDLPAG RQAYEMGLVSSAQMVKFLAINARPTT
Sbjct: 161 FRRRMFLAEIFDRKFVDAVLNEWQKTMMDLPAGLRQAYEMGLVSSAQMVKFLAINARPTT 220

Query: 228 TRFISRSLPQGISRAFIGRMLADPSFLYKLILEQAATIGCTVLWELENRKERIKQEWDLA 287
           TR ISR+LPQG+SRAF+GRMLADP+FLYKL+LEQAAT+GC+V WE++NRK R+K+EWDLA
Sbjct: 221 TRMISRALPQGLSRAFVGRMLADPAFLYKLLLEQAATVGCSVWWEVKNRKNRLKEEWDLA 280

Query: 288 LINVLTVTACNAFVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFERSYPFREFDLQKRIH 347
           LINVLTV+ACNA  VW LAPCRSYGNTFRFDLQNTLQKLPNN+FE SYP REFDLQKR H
Sbjct: 281 LINVLTVSACNAAAVWLLAPCRSYGNTFRFDLQNTLQKLPNNLFEMSYPLREFDLQKRFH 340

Query: 348 SLFYKAAELCMVGLSAGAVQGSLSNYLAG-KKDRLSVTIPSVSTSAL------------- 393
           SLFYKAAEL ++GL+AG +QGSLSN+LAG KK+R+SVT+PS+ST+AL             
Sbjct: 341 SLFYKAAELSILGLAAGTLQGSLSNFLAGKKKNRVSVTVPSISTNALGYGAFLGIYANLR 400

Query: 394 ------------------------------------ERSRLAWLGVEADPLLQSDDLLKK 417
                                               E+SR  WLGVEADPL QSDDLL K
Sbjct: 401 YQLLCGFERGVSSHFDVIGVALFFGTALRIMNVQLGEKSRQVWLGVEADPLAQSDDLLAK 460

Query: 418 AYNRPSQDVNGSTQKSPRWLISKNAIVSGLGLLGIKQGNVDSVEEEARAPKVRRKRIVRK 477
           AYNRPS++     + S RW ISKNAIVS  GLLG KQ   DSV +    PK RRKRIVRK
Sbjct: 461 AYNRPSEE--AVAKPSSRWFISKNAIVS--GLLGKKQE--DSVSDPP-PPKARRKRIVRK 513

Query: 478 KVTA 481
           KV A
Sbjct: 514 KVAA 517

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|22327037|ref|NP_197857.2| uncharacterized protein [Arabidopsis thaliana] gi|13877883|gb|AAK44019.1|AF370204_1 unknown protein [Arabidopsis thaliana] gi|15912313|gb|AAL08290.1| AT5g24690/MXC17_8 [Arabidopsis thaliana] gi|22136914|gb|AAM91801.1| unknown protein [Arabidopsis thaliana] gi|110739396|dbj|BAF01609.1| hypothetical protein [Arabidopsis thaliana] gi|110739479|dbj|BAF01649.1| hypothetical protein [Arabidopsis thaliana] gi|110739599|dbj|BAF01708.1| hypothetical protein [Arabidopsis thaliana] gi|110739615|dbj|BAF01716.1| hypothetical protein [Arabidopsis thaliana] gi|110739722|dbj|BAF01768.1| hypothetical protein [Arabidopsis thaliana] gi|110739756|dbj|BAF01785.1| hypothetical protein [Arabidopsis thaliana] gi|110739958|dbj|BAF01883.1| hypothetical protein [Arabidopsis thaliana] gi|110739966|dbj|BAF01887.1| hypothetical protein [Arabidopsis thaliana] gi|110740027|dbj|BAF01917.1| hypothetical protein [Arabidopsis thaliana] gi|110740029|dbj|BAF01918.1| hypothetical protein [Arabidopsis thaliana] gi|110740431|dbj|BAF02110.1| hypothetical protein [Arabidopsis thaliana] gi|110740452|dbj|BAF02120.1| hypothetical protein [Arabidopsis thaliana] gi|110741324|dbj|BAF02212.1| hypothetical protein [Arabidopsis thaliana] gi|332005967|gb|AED93350.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  524 bits (1349), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 329/541 (60%), Positives = 383/541 (70%), Gaps = 83/541 (15%)

Query: 1   MSHIMFQTT--PVPTTAAKAVSSASSSSTLAAPRYSTSYPVGVRVRRKNMLITCSVPSPL 58
           MSH++FQ+   P P +  K          L  PR   + P  +R       +  S  S L
Sbjct: 1   MSHMVFQSVVAPKPLSPLK--------PCLPIPRPLVTLPCKLR----RGFVRASSSSFL 48

Query: 59  IDGGDHSVVLLERCYKAPSALP--------SGSTAEYGPLMKGGQYGAFGAVTLEKGKLD 110
           +D    SV  LERC + PS +           ++ +  P+MKG ++G+ GAVTLEKGKLD
Sbjct: 49  VD---DSVSGLERCLQLPSGVELGTSSSGSFSASTQMCPVMKG-KFGSVGAVTLEKGKLD 104

Query: 111 TTQQQSETTPELATGGGGGDIGKKINHGGGDGGDDDGDDDDYFDDFDDGDEGDEGGLFRR 170
            TQ+ SET+PE+ATGGGGG+IGK IN+GGGDGGDD+GDDDDYFD+FDDGDEGD+ GLFRR
Sbjct: 105 MTQKISETSPEIATGGGGGNIGKSINNGGGDGGDDNGDDDDYFDEFDDGDEGDDDGLFRR 164

Query: 171 RKILEELFDRKFVDAVLNEWMKTMMDLPAGFRQAYEMGLVSSAQMVKFLAINARPTTTRF 230
           R  L E+FDRKFVDAVLNEW KTMMDLPAG RQAYEMGLVSSAQMVKFLAINARPTTTR 
Sbjct: 165 RMFLAEIFDRKFVDAVLNEWQKTMMDLPAGLRQAYEMGLVSSAQMVKFLAINARPTTTRM 224

Query: 231 ISRSLPQGISRAFIGRMLADPSFLYKLILEQAATIGCTVLWELENRKERIKQEWDLALIN 290
           ISR+LPQG+SRAF+GRMLADP+FLYKL+LEQAAT+GC+V WE++NRK R+K+EWDLALIN
Sbjct: 225 ISRALPQGLSRAFVGRMLADPAFLYKLLLEQAATVGCSVWWEVKNRKNRLKEEWDLALIN 284

Query: 291 VLTVTACNAFVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFERSYPFREFDLQKRIHSLF 350
           VLTV+ACNA  VW LAPCRSYGNTFRFDLQNTLQKLPNN+FE SYP REFDLQKR HSLF
Sbjct: 285 VLTVSACNAAAVWLLAPCRSYGNTFRFDLQNTLQKLPNNLFEMSYPLREFDLQKRFHSLF 344

Query: 351 YKAAELCMVGLSAGAVQGSLSNYLAG-KKDRLSVTIPSVSTSAL---------------- 393
           YKAAEL ++GL+AG +QGSLSN LAG KK+R+SVT+PS+ST+AL                
Sbjct: 345 YKAAELSILGLAAGTLQGSLSNVLAGKKKNRVSVTVPSISTNALGYGAFLGIYANLRYQL 404

Query: 394 ---------------------------------ERSRLAWLGVEADPLLQSDDLLKKAYN 420
                                            E+SR  WLGVEADPL QSDDLL KAYN
Sbjct: 405 LCGFERGVSSHFDVIGVALFFGTALRIMNVQLGEKSRQVWLGVEADPLAQSDDLLAKAYN 464

Query: 421 RPSQDVNGSTQKSPRWLISKNAIVSGLGLLGIKQGNVDSVEEEARAPKVRRKRIVRKKVT 480
           RPS++     + S +W ISKNAIVS  GLLG KQ   DSV +    PK RRKRIVRKKV 
Sbjct: 465 RPSEE--AVAKPSSKWFISKNAIVS--GLLGKKQE--DSVSDSP-PPKARRKRIVRKKVA 517

Query: 481 A 481
           A
Sbjct: 518 A 518

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|110741268|dbj|BAF02184.1| hypothetical protein [Arabidopsis thaliana] gi|110741316|dbj|BAF02208.1| hypothetical protein [Arabidopsis thaliana]

 Score =  523 bits (1348), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 328/541 (60%), Positives = 383/541 (70%), Gaps = 83/541 (15%)

Query: 1   MSHIMFQTT--PVPTTAAKAVSSASSSSTLAAPRYSTSYPVGVRVRRKNMLITCSVPSPL 58
           MSH++FQ+   P P +  K          L  PR   + P  +R       +  S  S L
Sbjct: 1   MSHMVFQSVVAPKPLSPLK--------PCLPIPRPLVTLPCKLR----RGFVRASSSSFL 48

Query: 59  IDGGDHSVVLLERCYKAPSALP--------SGSTAEYGPLMKGGQYGAFGAVTLEKGKLD 110
           +D    SV  LERC + PS +           ++ +  P+MKG ++G+ GAVTLEKGKLD
Sbjct: 49  VD---DSVSGLERCLQLPSGVELGTSSSGSFSASTQMCPVMKG-KFGSVGAVTLEKGKLD 104

Query: 111 TTQQQSETTPELATGGGGGDIGKKINHGGGDGGDDDGDDDDYFDDFDDGDEGDEGGLFRR 170
            TQ+ SET+PE+ATGGGGG+IGK IN+GGGDGGDD+GDDDDYFD+FDDG+EGD+ GLFRR
Sbjct: 105 MTQKISETSPEIATGGGGGNIGKSINNGGGDGGDDNGDDDDYFDEFDDGNEGDDDGLFRR 164

Query: 171 RKILEELFDRKFVDAVLNEWMKTMMDLPAGFRQAYEMGLVSSAQMVKFLAINARPTTTRF 230
           R  L E+FDRKFVDAVLNEW KTMMDLPAG RQAYEMGLVSSAQMVKFLAINARPTTTR 
Sbjct: 165 RMFLAEIFDRKFVDAVLNEWQKTMMDLPAGLRQAYEMGLVSSAQMVKFLAINARPTTTRM 224

Query: 231 ISRSLPQGISRAFIGRMLADPSFLYKLILEQAATIGCTVLWELENRKERIKQEWDLALIN 290
           ISR+LPQG+SRAF+GRMLADP+FLYKL+LEQAAT+GC+V WE++NRK R+K+EWDLALIN
Sbjct: 225 ISRALPQGLSRAFVGRMLADPAFLYKLLLEQAATVGCSVWWEVKNRKNRLKEEWDLALIN 284

Query: 291 VLTVTACNAFVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFERSYPFREFDLQKRIHSLF 350
           VLTV+ACNA  VW LAPCRSYGNTFRFDLQNTLQKLPNN+FE SYP REFDLQKR HSLF
Sbjct: 285 VLTVSACNAAAVWLLAPCRSYGNTFRFDLQNTLQKLPNNLFEMSYPLREFDLQKRFHSLF 344

Query: 351 YKAAELCMVGLSAGAVQGSLSNYLAG-KKDRLSVTIPSVSTSAL---------------- 393
           YKAAEL ++GL+AG +QGSLSN LAG KK+R+SVT+PS+ST+AL                
Sbjct: 345 YKAAELSILGLAAGTLQGSLSNVLAGKKKNRVSVTVPSISTNALGYGAFLGIYANLRYRL 404

Query: 394 ---------------------------------ERSRLAWLGVEADPLLQSDDLLKKAYN 420
                                            E+SR  WLGVEADPL QSDDLL KAYN
Sbjct: 405 LCGFERGVSSHFDVIGVALFFGTALRIMNVQLGEKSRQVWLGVEADPLAQSDDLLAKAYN 464

Query: 421 RPSQDVNGSTQKSPRWLISKNAIVSGLGLLGIKQGNVDSVEEEARAPKVRRKRIVRKKVT 480
           RPS++     + S +W ISKNAIVS  GLLG KQ   DSV +    PK RRKRIVRKKV 
Sbjct: 465 RPSEE--AVAKPSSKWFISKNAIVS--GLLGKKQE--DSVSDSP-PPKARRKRIVRKKVA 517

Query: 481 A 481
           A
Sbjct: 518 A 518

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	481
TAIR|locus:2176826	521	AT5G24690 "AT5G24690" [Arabido	0.494	0.456	0.792	4e-132
TAIR|locus:2063136	735	AT2G40400 [Arabidopsis thalian	0.395	0.258	0.310	6.8e-12
TAIR|locus:2078446	745	AT3G56140 "AT3G56140" [Arabido	0.395	0.255	0.305	1.5e-11
TAIR|locus:2158155	433	RER1 "AT5G22790" [Arabidopsis	0.449	0.498	0.270	4.4e-10
TAIR|locus:2065649	432	LCD1 "AT2G37860" [Arabidopsis	0.449	0.5	0.258	1.6e-09
TAIR|locus:2077838	337	AT3G08640 "AT3G08640" [Arabido	0.332	0.474	0.25	0.00011
TAIR|locus:2077828	339	AT3G08630 "AT3G08630" [Arabido	0.351	0.498	0.260	0.00011

TAIR|locus:2176826 AT5G24690 "AT5G24690" [Arabidopsis thaliana (taxid:3702)]

 Score = 993 (354.6 bits), Expect = 4.0e-132, Sum P(3) = 4.0e-132
 Identities = 191/241 (79%), Positives = 217/241 (90%)

Query:   167 LFRRRKILEELFDRKFVDAVLNEWMKTMMDLPAGFRQAYEMGLVSSAQMVKFLAINARPT 226
             LFRRR  L E+FDRKFVDAVLNEW KTMMDLPAG RQAYEMGLVSSAQMVKFLAINARPT
Sbjct:   161 LFRRRMFLAEIFDRKFVDAVLNEWQKTMMDLPAGLRQAYEMGLVSSAQMVKFLAINARPT 220

Query:   227 TTRFISRSLPQGISRAFIGRMLADPSFLYKLILEQAATIGCTVLWELENRKERIKQEWDL 286
             TTR ISR+LPQG+SRAF+GRMLADP+FLYKL+LEQAAT+GC+V WE++NRK R+K+EWDL
Sbjct:   221 TTRMISRALPQGLSRAFVGRMLADPAFLYKLLLEQAATVGCSVWWEVKNRKNRLKEEWDL 280

Query:   287 ALINVLTVTACNAFVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFERSYPFREFDLQKRI 346
             ALINVLTV+ACNA  VW LAPCRSYGNTFRFDLQNTLQKLPNN+FE SYP REFDLQKR 
Sbjct:   281 ALINVLTVSACNAAAVWLLAPCRSYGNTFRFDLQNTLQKLPNNLFEMSYPLREFDLQKRF 340

Query:   347 HSLFYKAAELCMVGLSAGAVQGSLSNYLAGKK-DRLSVTIPSVSTSALERSRLAWLGVEA 405
             HSLFYKAAEL ++GL+AG +QGSLSN LAGKK +R+SVT+PS+ST+AL     A+LG+ A
Sbjct:   341 HSLFYKAAELSILGLAAGTLQGSLSNVLAGKKKNRVSVTVPSISTNALGYG--AFLGIYA 398

Query:   406 D 406
             +
Sbjct:   399 N 399

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009706 "chloroplast inner membrane" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0009536 "plastid" evidence=IDA

TAIR|locus:2063136 AT2G40400 [Arabidopsis thaliana (taxid:3702)]

 Score = 192 (72.6 bits), Expect = 6.8e-12, P = 6.8e-12
 Identities = 64/206 (31%), Positives = 100/206 (48%)

Query:   178 FDRKFVDAVLNEWMKTMMDLPAGFRQAYEMGLVSSAQMVKFLAINARPTTTRFISRSLPQ 237
             FDR  +  V+N   +    LP   ++  ++GLVS   +  F  +   P  +    R   Q
Sbjct:   409 FDRAEIARVMNAAGRRRDALPQDIQKGLDLGLVSPEILQNFFDLEQYPLISELTQRF--Q 466

Query:   238 GISRAFIGRMLADPSFLYKLILEQAATIGCTVLWELENRKERIKQEWDLALINVLTVTAC 297
             G    F  R+LADP FL +L +E+A +I  T++ + E RKE   +E D  + + +  +  
Sbjct:   467 G----FRERLLADPKFLNRLAIEEAISITTTLVAQYEKRKENFFEELDYVITDSVRASVV 522

Query:   298 NAFVVWSLAPCRSY----GNTF---RFD-LQNTLQKLPNNIFERSYPFREFDLQKRIHSL 349
             + F VW  AP  S+      T      D L+  L  +P+N F++S   +E+ L  RI S+
Sbjct:   523 DFFTVWLPAPTLSFISYADETIGPNSIDALRGLLGSIPDNAFQKSLGGQEWTLSLRIASV 582

Query:   350 FYKAAELCMVGL-SAGAVQGSLSNYL 374
                  +L  VG+ S+ A  GS SN L
Sbjct:   583 IIGGLKLAGVGVVSSFAAVGS-SNAL 607

GO:0009507 "chloroplast" evidence=ISM

GO:0009543 "chloroplast thylakoid lumen" evidence=ISS

GO:0015995 "chlorophyll biosynthetic process" evidence=RCA

TAIR|locus:2078446 AT3G56140 "AT3G56140" [Arabidopsis thaliana (taxid:3702)]

 Score = 189 (71.6 bits), Expect = 1.5e-11, P = 1.5e-11
 Identities = 63/206 (30%), Positives = 99/206 (48%)

Query:   178 FDRKFVDAVLNEWMKTMMDLPAGFRQAYEMGLVSSAQMVKFLAINARPTTTRFISRSLPQ 237
             FDR  +  V+N   +    LP   +   ++GLVS   +     +   P  +    R   Q
Sbjct:   418 FDRAEIARVMNAAGRRRDALPPDIQNGLDLGLVSPEVLQNLFDLEQYPLISELTQRF--Q 475

Query:   238 GISRAFIGRMLADPSFLYKLILEQAATIGCTVLWELENRKERIKQEWDLALINVLTVTAC 297
             G    F  R+LADP FL +L +E+A +I  T++ + E RKE   +E D  + + +  +  
Sbjct:   476 G----FRERLLADPKFLNRLAIEEAISITTTLIAQYEKRKENFFEEIDYVITDTVRGSVV 531

Query:   298 NAFVVWSLAPCRSY----GNTFRFD----LQNTLQKLPNNIFERSYPFREFDLQKRIHSL 349
             + F VW  AP  S+      T   D    L+  L  +P+N F++S   RE++L  RI S+
Sbjct:   532 DFFTVWLPAPTLSFLSYADETTGPDSIDALRGLLGSIPDNAFQKSLAGREWNLNLRIASV 591

Query:   350 FYKAAELCMVGL-SAGAVQGSLSNYL 374
                  +L  VG+ S+ A  G+ SN L
Sbjct:   592 IVGGLKLAGVGVVSSFAAVGA-SNAL 616

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009543 "chloroplast thylakoid lumen" evidence=ISS

TAIR|locus:2158155 RER1 "AT5G22790" [Arabidopsis thaliana (taxid:3702)]

 Score = 172 (65.6 bits), Expect = 4.4e-10, P = 4.4e-10
 Identities = 62/229 (27%), Positives = 101/229 (44%)

Query:   181 KFVDAVLNEWMKTMMDLPAGFRQAYEMGLVSSAQMVKFLAINARPTTTRFISRSLPQGIS 240
             KF + V+ E  +  + LP    +A +   +    ++++L +        F+ RS    + 
Sbjct:   150 KF-EEVMKETERRGITLPEDMLEAAKSVGIRKLFLLRYLDLQGSVWPLGFLMRSC--AML 206

Query:   241 RAFIGRMLADPSFLYKLILEQAATIGCTVLWELENRKERIKQEWDLALINVLTVTACNAF 300
             R    RMLADPSFL+K+  E A    C    E++ R E    E++L   ++L     +  
Sbjct:   207 R---NRMLADPSFLFKVGTEVAIDSCCATFAEVQKRGEDFWSEFELYAADLLVGLVVDVA 263

Query:   301 VVWSLAPCRSYG-----NTFRF-DLQNTLQKLPNNIFERSYPFREFDLQKRIHSLFYKAA 354
             +V  LAP    G     +T  F DL+     LP+++FE   P  +F + +RI + FYK  
Sbjct:   264 LVGLLAPYARIGKPSVASTGLFKDLKRACASLPSSVFEAERPGCKFSVNQRIATFFYKGL 323

Query:   355 ELCMVGLSAGAVQGSLSNYLAGKKDRLSVTIPSVSTSALERSRLAWLGV 403
                 VG   G +   ++N +   K  +  +   V    L  S   W GV
Sbjct:   324 LYGSVGFGCGLIGQGIANLIMTAKRSVKKSEEDVPIPPLFESAALW-GV 371

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009706 "chloroplast inner membrane" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0009536 "plastid" evidence=IDA

TAIR|locus:2065649 LCD1 "AT2G37860" [Arabidopsis thaliana (taxid:3702)]

 Score = 167 (63.8 bits), Expect = 1.6e-09, P = 1.6e-09
 Identities = 59/228 (25%), Positives = 101/228 (44%)

Query:   181 KFVDAVLNEWMKTMMDLPAGFRQAYEMGLVSSAQMVKFLAINARPTTTRFISRSLPQGIS 240
             KF + V+ E       LP+   +A +   +    ++++L + +      F  RS    + 
Sbjct:   150 KF-EEVMKETEARGATLPSDMLEAAKNYGIRKVLLLRYLDLQSSAGLLGFAIRSW--AML 206

Query:   241 RAFIGRMLADPSFLYKLILEQAATIGCTVLWELENRKERIKQEWDLALINVLTVTACNAF 300
             R    RMLADPSFL+K+  E      C  + E++ R +    E++L + ++L  T  N  
Sbjct:   207 R---NRMLADPSFLFKIGAEIVIDSCCATVAEVQKRGKDFWAEFELYVADLLVGTVVNIA 263

Query:   301 VVWSLAPCRSYGNT-----FRFDLQNTLQKLPNNIFERSYPFREFDLQKRIHSLFYKAAE 355
             +V  LAP   +G       F   +      LP+++FE   P   F  Q+R+ + FYK   
Sbjct:   264 LVGMLAPYVRFGQPSASPGFLGRMVFAYNALPSSVFEAERPGCRFSAQQRLATYFYKGIM 323

Query:   356 LCMVGLSAGAVQGSLSNYLAGKKDRLSVTIPSVSTSALERSRLAWLGV 403
                VG   G V   ++N +   K  ++ +  ++    L +S   W GV
Sbjct:   324 YGAVGFGCGIVGQGIANLIMTAKRNINKSEENIPVPPLIKSAALW-GV 370

GO:0003674 "molecular_function" evidence=ND

GO:0048366 "leaf development" evidence=IMP

GO:0016020 "membrane" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009536 "plastid" evidence=IDA

TAIR|locus:2077838 AT3G08640 "AT3G08640" [Arabidopsis thaliana (taxid:3702)]

 Score = 122 (48.0 bits), Expect = 0.00011, P = 0.00011
 Identities = 43/172 (25%), Positives = 80/172 (46%)

Query:   246 RMLADPSFLYKLILEQAATIGCTVLWELENRKERIKQEWDLALINVLTVTACNAFVVWSL 305
             R+ ADP F +K+++E+   +   VL ++ +R      E D     ++  +  N  +++ L
Sbjct:   111 RVAADPQFPFKVLMEEIVGLSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFVLMYML 170

Query:   306 APCRSYGNTFRFDLQNTLQKLPNN-IFERSYPFREFDLQKRIHSLFYKAAELCMVGLSAG 364
             AP  +   + +  L    +  P++ +FE+      F +  R  +L YK      VGL+AG
Sbjct:   171 APTAATLGSSQ-TLPGIFRNCPSSHMFEQG----SFTVMNRFGTLVYKGMVFASVGLAAG 225

Query:   365 AVQGSLSNYLAGKKDRL--SVTIPSVSTSALERSRLAW---LGVEADPLLQS 411
              V  ++SN L   + ++  S   P+     +  S L W   +GV A+   Q+
Sbjct:   226 LVGTAISNGLIMLRKKMDPSFETPNKPPPTVLNS-LTWATHMGVSANARYQT 276

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009536 "plastid" evidence=IDA

TAIR|locus:2077828 AT3G08630 "AT3G08630" [Arabidopsis thaliana (taxid:3702)]

 Score = 122 (48.0 bits), Expect = 0.00011, P = 0.00011
 Identities = 48/184 (26%), Positives = 85/184 (46%)

Query:   236 PQGIS-RAFIGRMLADPSFLYKLILEQAATIGCTVLWELENRKERIKQEWDLALINVLTV 294
             P G+  + +  R+ AD  F +K+++E    +   VL ++ +R      E D     ++  
Sbjct:    97 PLGLFIQGWRSRVAADSQFPFKVLMEMLVGVSANVLGDMASRPNFGLNELDFVFSTLVVG 156

Query:   295 TACNAFVVWSLAPCR-SYGNTFRFDLQNTLQKLPNN-IFERSYPFREFDLQKRIHSLFYK 352
             +  N  +++ LAP   S+G++    L    +  P++ +FE+      F L  R  +L YK
Sbjct:   157 SILNFTLMYLLAPSAISHGSSNL--LPGIFRSCPSSHMFEQG----NFTLMNRFGTLVYK 210

Query:   353 AAELCMVGLSAGAVQGSLSNYLAGKKDRL--SVTIPSVSTSALERSRLAW---LGVEADP 407
                   VGL+AG V  ++SN L   + ++  S   P+     L  S L W   +GV A+ 
Sbjct:   211 GMVFATVGLAAGLVGTAISNGLIMLRKKIDPSFETPNKPPPTLLNS-LTWATHMGVSANV 269

Query:   408 LLQS 411
               Q+
Sbjct:   270 RYQT 273


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.134   0.393    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      481       404   0.00099  117 3  11 22  0.38    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  7
  No. of states in DFA:  615 (65 KB)
  Total size of DFA:  246 KB (2132 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  30.70u 0.11s 30.81t   Elapsed:  00:00:01
  Total cpu time:  30.70u 0.11s 30.81t   Elapsed:  00:00:01
  Start:  Sat May 11 00:56:54 2013   End:  Sat May 11 00:56:55 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0009536 "plastid" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	481
pfam11891	179	pfam11891, DUF3411, Domain of unknown function (DU	2e-55

>gnl|CDD|221294 pfam11891, DUF3411, Domain of unknown function (DUF3411)

 Score =  182 bits (464), Expect = 2e-55
 Identities = 58/158 (36%), Positives = 87/158 (55%), Gaps = 9/158 (5%)

Query: 245 GRMLADPSFLYKLILEQAATIGCTVLWELENRKERIKQEWDLALINVLTVTACNAFVVWS 304
            R+LADPSFL+KL +E+   I    + E+E R E    E+DL   ++L  +  N  +V+ 
Sbjct: 1   ERLLADPSFLFKLAMEEVIDICAATVAEVEKRGENFWAEFDLVAADLLVGSVVNFALVYL 60

Query: 305 LAPCRSYGNTFRFDLQ---NTLQKLPNNIFERSYPFREFDLQKRIHSLFYKAAELCMVGL 361
           LAP RS+G+T           L  LP+N+FE+  P R + LQ+R  ++FYK A+L  VG 
Sbjct: 61  LAPTRSFGSTAAEMAGGLRKFLGSLPSNVFEKGLPGRSYSLQQRFGTVFYKGAKLAAVGF 120

Query: 362 SAGAVQGSLSNYLAGKKDRL------SVTIPSVSTSAL 393
            AG V  ++SN L   +  +      SV +P +  +AL
Sbjct: 121 IAGLVGQAISNALMAARKAVDKNSEESVKVPPLFKTAL 158

This presumed domain is functionally uncharacterized. This domain is found in eukaryotes. This domain is typically between 168 to 186 amino acids in length. This domain has a conserved RYQ sequence motif. Length = 179

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	481
PF11891	180	DUF3411: Domain of unknown function (DUF3411); Int	100.0
PF06524	314	NOA36: NOA36 protein; InterPro: IPR010531 This fam	88.52

>PF11891 DUF3411: Domain of unknown function (DUF3411); InterPro: IPR021825 This presumed domain is functionally uncharacterised

Probab=100.00  E-value=4.2e-66  Score=481.55  Aligned_cols=169  Identities=41%  Similarity=0.610  Sum_probs=162.3

Q ss_pred             hhhccCchhHHHHHHHHHHhhhhhhhhhhhhcchhhhhHHHHHHHHHHHHHHhhHHHhhhcccccccCCccc----cchH
Q 011601          245 GRMLADPSFLYKLILEQAATIGCTVLWELENRKERIKQEWDLALINVLTVTACNAFVVWSLAPCRSYGNTFR----FDLQ  320 (481)
Q Consensus       245 ~RlLADP~FLfKL~iE~~I~i~~~~~aE~~~Rge~F~~ElDfV~sdvv~g~v~nfaLVwLLAPt~s~G~~~~----~~lq  320 (481)
                      |||||||+|||||++||+||++|+++|||++|||+||+|||||+||+++++|+||+||||||||++++++++    +.+|
T Consensus         1 ~RllADP~Fl~Kl~~E~~i~i~~~~~~e~~~R~e~f~~E~d~v~~d~v~~~i~n~~lv~llAPt~s~~~~~~~~~~~~~~   80 (180)
T PF11891_consen    1 ERLLADPSFLFKLAIEEVIGIGCATAAEYAKRGERFWNELDFVFSDVVVGSIVNFALVWLLAPTRSFGSPAASSPGGGLQ   80 (180)
T ss_pred             CcccccchHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHHHHhccchHhhCcccccccchHHH
Confidence            799999999999999999999999999999999999999999999999999999999999999999999988    6899


Q ss_pred             HHhccCCCccccccCCCCCcchhhhHHHHHhhchhhhhhHhHHHhhHHHHHHHHhh-c-cC----CCcccCCchhhhhhh
Q 011601          321 NTLQKLPNNIFERSYPFREFDLQKRIHSLFYKAAELCMVGLSAGAVQGSLSNYLAG-K-KD----RLSVTIPSVSTSALE  394 (481)
Q Consensus       321 k~l~~lP~N~Feks~pg~~fsl~qRiga~v~KGa~l~~VG~~aGlvG~glSN~L~~-k-K~----~~s~~vP~l~tsAl~  394 (481)
                      +++++||+||||+++||++||++||++||+|||++|++|||+||++|+++||+|++ | +.    ++++++|||++||+ 
T Consensus        81 ~~~~~~P~n~Fq~~~~g~~fsl~qR~~~~~~kg~~l~~VG~~ag~vg~~lsn~L~~~rk~~~~~~e~~~~~ppv~~ta~-  159 (180)
T PF11891_consen   81 KFLGSLPNNAFQKGYPGRSFSLAQRIGAFVYKGAKLAAVGFIAGLVGTGLSNALIAARKKVDPSFEPSVPVPPVLKTAL-  159 (180)
T ss_pred             HHHHhChHHHhccCCCCCcccHHHHHHHHHHcchHhhhhHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCCCHHHHHH-
Confidence            99999999999999999999999999999999999999999999999999999999 4 33    35778899999999 


Q ss_pred             hhhhhhhcccccchhhhhHHH
Q 011601          395 RSRLAWLGVEADPLLQSDDLL  415 (481)
Q Consensus       395 ~~w~~fmGvSAN~RyQ~~nll  415 (481)
                       +|++|||+|||+|||..|++
T Consensus       160 -~~g~fmGvSsNlRYQil~Gi  179 (180)
T PF11891_consen  160 -GWGAFMGVSSNLRYQILNGI  179 (180)
T ss_pred             -HHHHHHhhhHhHHHHHHcCC
Confidence             69999999999999998876

This domain is found in eukaryotes. This domain is typically between 168 to 186 amino acids in length. This domain has a conserved RYQ sequence motif.

>PF06524 NOA36: NOA36 protein; InterPro: IPR010531 This family consists of several NOA36 proteins which contain 29 highly conserved cysteine residues

Probab=88.52  E-value=0.44  Score=48.84  Aligned_cols=11  Identities=27%  Similarity=0.286  Sum_probs=4.6

Q ss_pred             eeeccccccee
Q 011601          103 TLEKGKLDTTQ  113 (481)
Q Consensus       103 tleks~l~~~q  113 (481)
                      |-|-.-|.+|-
T Consensus       219 t~eTkdLSmSt  229 (314)
T PF06524_consen  219 TQETKDLSMST  229 (314)
T ss_pred             ccccccceeee
Confidence            33444444443

The function of this protein is unknown.; GO: 0008270 zinc ion binding, 0005634 nucleus

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00