Citrus Sinensis ID: 011765
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 478 | 2.2.26 [Sep-21-2011] | |||||||
| Q940V3 | 470 | UDP-glycosyltransferase 9 | yes | no | 0.958 | 0.974 | 0.565 | 1e-154 | |
| Q66PF2 | 478 | Putative UDP-rhamnose:rha | N/A | no | 0.960 | 0.960 | 0.525 | 1e-138 | |
| Q9LTA3 | 460 | UDP-glycosyltransferase 9 | no | no | 0.930 | 0.967 | 0.497 | 1e-127 | |
| Q9LSM0 | 466 | UDP-glycosyltransferase 9 | no | no | 0.941 | 0.965 | 0.482 | 1e-120 | |
| D4Q9Z5 | 472 | Soyasaponin III rhamnosyl | no | no | 0.943 | 0.955 | 0.408 | 1e-106 | |
| Q43716 | 473 | Anthocyanidin 3-O-glucosy | N/A | no | 0.930 | 0.940 | 0.333 | 1e-64 | |
| Q9LJA6 | 448 | UDP-glycosyltransferase 7 | no | no | 0.910 | 0.970 | 0.321 | 4e-60 | |
| Q9XIQ5 | 447 | UDP-glycosyltransferase 7 | no | no | 0.895 | 0.957 | 0.321 | 5e-57 | |
| Q9FN28 | 447 | UDP-glycosyltransferase 7 | no | no | 0.897 | 0.959 | 0.315 | 9e-57 | |
| Q9LVW3 | 468 | UDP-glycosyltransferase 7 | no | no | 0.928 | 0.948 | 0.311 | 1e-54 |
| >sp|Q940V3|U91A1_ARATH UDP-glycosyltransferase 91A1 OS=Arabidopsis thaliana GN=UGT91A1 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 543 bits (1400), Expect = e-154, Method: Compositional matrix adjust.
Identities = 265/469 (56%), Positives = 345/469 (73%), Gaps = 11/469 (2%)
Query: 2 ADNSKLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRL-PRLPQNLASMI 60
D +KL + MFPWLAFGHM+P+LEL+KLIAQKGHK+ FISTPRNIDRL PRLP+NL+S+I
Sbjct: 9 GDGTKLHVVMFPWLAFGHMVPYLELSKLIAQKGHKVSFISTPRNIDRLLPRLPENLSSVI 68
Query: 61 QFVKISLPHVDN-LRENAEATIDLPYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFA 119
FVK+SLP DN L E+ EAT D+P++ + YLK ++D L+ P+ + L+S PDW+L DFA
Sbjct: 69 NFVKLSLPVGDNKLPEDGEATTDVPFELIPYLKIAYDGLKVPVTEFLESSKPDWVLQDFA 128
Query: 120 AYWLPARARELGIPSGFFSIFTAATLGYFGPSSVLINDSGDHLKTPEDYTRVPNWVSFPT 179
+WLP +R LGI +GFFS F ATLG P ++ +P D+ + P WV F T
Sbjct: 129 GFWLPPISRRLGIKTGFFSAFNGATLGILKPPGF-----EEYRTSPADFMKPPKWVPFET 183
Query: 180 TISYRLFEARKVFDILISD--ESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQL 237
+++++LFE R +F +++ E NV +R G + GCD++ VRSC E+E EWL L ++L
Sbjct: 184 SVAFKLFECRFIFKGFMAETTEGNVPDIHRVGGVIDGCDVIFVRSCYEYEAEWLGLTQEL 243
Query: 238 HRKPVIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTE 297
HRKPVIPVG LP + D TDTW S+K+WLD ++ S+VYVAFGSEAKPSQ EL E
Sbjct: 244 HRKPVIPVGVLPPKPDEKFED--TDTWLSVKKWLDSRKSKSIVYVAFGSEAKPSQTELNE 301
Query: 298 IALGLELSKLPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSV 357
IALGLELS LPFFWVLK R G DTEP+ELP+GFEERT RG+V+ W QL L+HDS+
Sbjct: 302 IALGLELSGLPFFWVLKTRRGPWDTEPVELPEGFEERTADRGMVWRGWVEQLRTLSHDSI 361
Query: 358 GGFLTHAGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNS 417
G LTH GW +++EA++F P+ +L DQGLNA+++EEK+I +IPRDE +GFFT+ S
Sbjct: 362 GLVLTHPGWGTIIEAIRFAKPMAMLVFVYDQGLNARVIEEKKIGYMIPRDETEGFFTKES 421
Query: 418 VAESLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLKNHR 466
VA SLRLV+VEE+G++YR+ KEMKG+FGD R DRYVD+FL YL +R
Sbjct: 422 VANSLRLVMVEEEGKVYRENVKEMKGVFGDMDRQDRYVDSFLEYLVTNR 470
|
Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: - |
| >sp|Q66PF2|URT1_FRAAN Putative UDP-rhamnose:rhamnosyltransferase 1 OS=Fragaria ananassa GN=GT4 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 491 bits (1265), Expect = e-138, Method: Compositional matrix adjust.
Identities = 244/464 (52%), Positives = 327/464 (70%), Gaps = 5/464 (1%)
Query: 6 KLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKI 65
KL IA+FPWLAFGH+IP+LE+AK IA+KGHK+ FISTPRNI RLP++P+ L +I V+I
Sbjct: 11 KLHIALFPWLAFGHIIPFLEVAKHIARKGHKVSFISTPRNIQRLPKIPETLTPLINLVQI 70
Query: 66 SLPHVDNLRENAEATIDLPYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAAYWLPA 125
LPHV+NL ENAEAT+D+P+D + YLK + D LE+ +++ LQ+ +PDW++ DFA +WLP
Sbjct: 71 PLPHVENLPENAEATMDVPHDVIPYLKIAHDGLEQGISEFLQAQSPDWIIHDFAPHWLPP 130
Query: 126 RARELGIPSGFFSIFTAATLGYFGPSSVLINDSGDHLKTPEDYTRVPNWVSFPTTISYRL 185
A +LGI + FSIF A+++ +FG +S K E +T P W+ FP+ I +R
Sbjct: 131 IATKLGISNAHFSIFNASSMCFFGSTSPNRVSRYAPRKKLEQFTSPPEWIPFPSKIYHRP 190
Query: 186 FEARKVFD-ILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLHRKP-VI 243
FEA+++ D L + S V+ +R +++GC + +RSC E E EWL LLE LH KP V+
Sbjct: 191 FEAKRLMDGTLTPNASGVTDRFRLESTIQGCQVYFIRSCREIEGEWLDLLEDLHEKPIVL 250
Query: 244 PVGQLPTTTGDGDSDAETDT-WRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGL 302
P G LP + D D D+ W I WLD+QEKG VVY AFGSE SQE E+ALGL
Sbjct: 251 PTGLLPPSLPRSDEDGGKDSNWSKIAVWLDKQEKGKVVYAAFGSELNLSQEVFNELALGL 310
Query: 303 ELSKLPFFWVLKK-RLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFL 361
ELS LPFFWVL+K G D + ++LPDGFE+R +GRG+V+T+WAPQL IL+H+SVGGFL
Sbjct: 311 ELSGLPFFWVLRKPSHGSGDGDSVKLPDGFEDRVKGRGLVWTTWAPQLKILSHESVGGFL 370
Query: 362 THAGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAES 421
TH GWSS++E+LQ+G PLI+L DQGL A+ + K E +PRDE G+FTRN +A S
Sbjct: 371 THCGWSSIIESLQYGCPLIMLPFMYDQGLIARFWDNKIGAE-VPRDEETGWFTRNELANS 429
Query: 422 LRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLKNH 465
L+L++V+E+G+ YRD A E LF DK HDRY+D + YL+ H
Sbjct: 430 LKLIVVDEEGKQYRDGANEYSKLFRDKELHDRYMDECVEYLETH 473
|
Fragaria ananassa (taxid: 3747) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
| >sp|Q9LTA3|U91C1_ARATH UDP-glycosyltransferase 91C1 OS=Arabidopsis thaliana GN=UGT91C1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 454 bits (1168), Expect = e-127, Method: Compositional matrix adjust.
Identities = 228/458 (49%), Positives = 310/458 (67%), Gaps = 13/458 (2%)
Query: 7 LQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKIS 66
+ +AMFPWLA GH++P+L L+KL+AQKGHKI FISTPRNI+RLP+L NLAS I FV
Sbjct: 9 MHVAMFPWLAMGHLLPFLRLSKLLAQKGHKISFISTPRNIERLPKLQSNLASSITFVSFP 68
Query: 67 LPHVDNLRENAEATIDLPYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAAYWLPAR 126
LP + L ++E+++D+PY++ + LK +FD L+ P+ + L+ +PDW+++D+A++WLP+
Sbjct: 69 LPPISGLPPSSESSMDVPYNKQQSLKAAFDLLQPPLKEFLRRSSPDWIIYDYASHWLPSI 128
Query: 127 ARELGIPSGFFSIFTAATLGYFGPSSVLINDSGDHLKTPEDYTRVPNWVSFPTTISYRLF 186
A ELGI FFS+F AATL + GPSS LI + TPED+T VP WV F + I +R
Sbjct: 129 AAELGISKAFFSLFNAATLCFMGPSSSLIEEIR---STPEDFTVVPPWVPFKSNIVFRYH 185
Query: 187 EARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLHRKPVIPVG 246
E + + D + VS RFG S+ D V VRSC EFEPEW LL+ L+RKPV P+G
Sbjct: 186 EVTRYVEKTEEDVTGVSDSVRFGYSIDESDAVFVRSCPEFEPEWFGLLKDLYRKPVFPIG 245
Query: 247 QLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELSK 306
LP D DA TW IK+WLD+Q SVVYV+ G+EA EE+TE+ALGLE S+
Sbjct: 246 FLPPVI--EDDDAVDTTWVRIKKWLDKQRLNSVVYVSLGTEASLRHEEVTELALGLEKSE 303
Query: 307 LPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGW 366
PFFWVL+ EP ++PDGF+ R +GRG+V+ W PQ+ IL+H+SVGGFLTH GW
Sbjct: 304 TPFFWVLR-------NEP-KIPDGFKTRVKGRGMVHVGWVPQVKILSHESVGGFLTHCGW 355
Query: 367 SSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVL 426
+SVVE L FG I +QGLN +LL K + + RDE DG F +SVA+S+RLV+
Sbjct: 356 NSVVEGLGFGKVPIFFPVLNEQGLNTRLLHGKGLGVEVSRDERDGSFDSDSVADSIRLVM 415
Query: 427 VEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLKN 464
+++ G+ R KAK MK LFG+ + RYVD + ++++
Sbjct: 416 IDDAGEEIRAKAKVMKDLFGNMDENIRYVDELVRFMRS 453
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
| >sp|Q9LSM0|U91B1_ARATH UDP-glycosyltransferase 91B1 OS=Arabidopsis thaliana GN=UGT91B1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 434 bits (1115), Expect = e-120, Method: Compositional matrix adjust.
Identities = 224/464 (48%), Positives = 305/464 (65%), Gaps = 14/464 (3%)
Query: 6 KLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKI 65
KL +A+FPWLA GHMIP+L+L+KLIA+KGH + FIST RNI RLP + +L+ + FV +
Sbjct: 7 KLHVAVFPWLALGHMIPYLQLSKLIARKGHTVSFISTARNISRLPNISSDLS--VNFVSL 64
Query: 66 SLPH-VDNLRENAEATIDLPYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAAYWLP 124
L VD+L ENAEAT D+P + YLK++FD L E + L++ P+W+++D +W+P
Sbjct: 65 PLSQTVDHLPENAEATTDVPETHIAYLKKAFDGLSEAFTEFLEASKPNWIVYDILHHWVP 124
Query: 125 ARARELGIPSGFFSIFTAATLGYFG-PSSVLINDSGDHLKTPEDYTRVPNWVSFPTTISY 183
A +LG+ F F AA++ G P+SV+I D KT ED P WV F T I Y
Sbjct: 125 PIAEKLGVRRAIFCTFNAASIIIIGGPASVMIQGH-DPRKTAEDLIVPPPWVPFETNIVY 183
Query: 184 RLFEARKVFDILISDESNV--SHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLHRKP 241
RLFEA+++ + + + V + R G + G +++ +RSCME EPEW++LL +L KP
Sbjct: 184 RLFEAKRIMEYPTAGVTGVELNDNCRLGLAYVGSEVIVIRSCMELEPEWIQLLSKLQGKP 243
Query: 242 VIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALG 301
VIP+G LP T D D+D E TW I+EWLD + SVVYVA G+E S EE+ +A G
Sbjct: 244 VIPIGLLPATPMD-DADDE-GTWLDIREWLDRHQAKSVVYVALGTEVTISNEEIQGLAHG 301
Query: 302 LELSKLPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFL 361
LEL +LPFFW L+KR + + LPDGF+ER + RGV++T W PQ IL+H SVGGF+
Sbjct: 302 LELCRLPFFWTLRKRTRAS----MLLPDGFKERVKERGVIWTEWVPQTKILSHGSVGGFV 357
Query: 362 THAGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAES 421
TH GW S VE L FG+PLI+ C DQ L A+LL I IPR+E DG FT SVAE+
Sbjct: 358 THCGWGSAVEGLSFGVPLIMFPCNLDQPLVARLLSGMNIGLEIPRNERDGLFTSASVAET 417
Query: 422 LRLVLVEEKGQIYRDK-AKEMKGLFGDKGRHDRYVDNFLNYLKN 464
+R V+VEE+G+IYR+ A + K +FG+K D+Y D F+ +L+N
Sbjct: 418 IRHVVVEEEGKIYRNNAASQQKKIFGNKRLQDQYADGFIEFLEN 461
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
| >sp|D4Q9Z5|SGT3_SOYBN Soyasaponin III rhamnosyltransferase OS=Glycine max GN=GmSGT3 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 385 bits (989), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/472 (40%), Positives = 297/472 (62%), Gaps = 21/472 (4%)
Query: 2 ADNSKLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQ 61
+++ L +AM PWLA GH+ P+ E+AK++AQKGH + FI++P+NIDR+P+ P++L I+
Sbjct: 10 SNDKPLHVAMLPWLAMGHIYPYFEVAKILAQKGHFVTFINSPKNIDRMPKTPKHLEPFIK 69
Query: 62 FVKISLPHVDNLRENAEATIDLPYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAAY 121
VK+ LP +++L E AE+T+D+P + +LK++++ L+ ++KLL++ PDW+L+DFAA
Sbjct: 70 LVKLPLPKIEHLPEGAESTMDIPSKKNCFLKKAYEGLQYAVSKLLKTSNPDWVLYDFAAA 129
Query: 122 WLPARARELGIPSGFFSIFTAATLGYFGPSSVLINDSGDHLKTPEDYTRV-----PNWVS 176
W+ A+ IP ++I A +F P D +K DY+ P W+
Sbjct: 130 WVIPIAKSYNIPCAHYNITPAFNKVFFDPPK-------DKMK---DYSLASICGPPTWLP 179
Query: 177 FPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQ 236
F TTI R +E + ++ +E+ + ++ CD+ +R+ E E +WL L
Sbjct: 180 FTTTIHIRPYEFLRAYEGTKDEETGERASFDLNKAYSSCDLFLLRTSRELEGDWLDYLAG 239
Query: 237 LHRKPVIPVGQLPTTTGDGDSDAETDT--WRSIKEWLDEQEKGSVVYVAFGSEAKPSQEE 294
++ PV+PVG LP + D + E + W IK+WLD QE SVVY+ FGSE K SQE+
Sbjct: 240 NYKVPVVPVGLLPPSMQIRDVEEEDNNPDWVRIKDWLDTQESSSVVYIGFGSELKLSQED 299
Query: 295 LTEIALGLELSKLPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAH 354
LTE+A G+ELS LPFFW LK +ELP+GFEERT+ RG+V+ +WAPQL ILAH
Sbjct: 300 LTELAHGIELSNLPFFWALKNLKEGV----LELPEGFEERTKERGIVWKTWAPQLKILAH 355
Query: 355 DSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFT 414
++GG ++H G SV+E + FG L+ L DQ L +++LEEKQ+ +PR E DG FT
Sbjct: 356 GAIGGCMSHCGSGSVIEKVHFGHVLVTLPYLLDQCLFSRVLEEKQVAVEVPRSEKDGSFT 415
Query: 415 RNSVAESLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLKNHR 466
R VA++LR +V+E+G R+ AKEM +F + H++Y+ +F++ L+ +R
Sbjct: 416 RVDVAKTLRFAIVDEEGSALRENAKEMGKVFSSEELHNKYIQDFIDALQKYR 467
|
Glycosyltransferase that transfers a rhamnosyl group from UDP-rhamnose to soyasaponin III in the biosynthetic pathway for soyasaponins. Glycine max (taxid: 3847) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 7 EC: 3 |
| >sp|Q43716|UFOG_PETHY Anthocyanidin 3-O-glucosyltransferase OS=Petunia hybrida GN=RT PE=2 SV=1 | Back alignment and function description |
|---|
Score = 247 bits (631), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 156/468 (33%), Positives = 251/468 (53%), Gaps = 23/468 (4%)
Query: 3 DNSKLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQF 62
N L + MFP+ AFGH+ P+++LA ++ G K+ F + N R+ + N A
Sbjct: 8 SNDALHVVMFPFFAFGHISPFVQLANKLSSYGVKVSFFTASGNASRVKSM-LNSAPTTHI 66
Query: 63 VKISLPHVDNLRENAEATIDLPYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAAYW 122
V ++LPHV+ L AE+T +L + LK + D ++ + LL L P ++LFDFA W
Sbjct: 67 VPLTLPHVEGLPPGAESTAELTPASAELLKVALDLMQPQIKTLLSHLKPHFVLFDFAQEW 126
Query: 123 LPARARELGIPSGFFSIFTAATLGYFG-PSSVLINDSGDHLKTPEDYTRVPNWVSFPTT- 180
LP A LGI + ++S+ A + + P+ VL L ED + P + FP T
Sbjct: 127 LPKMANGLGIKTVYYSVVVALSTAFLTCPARVLEPKKYPSL---EDMKKPP--LGFPQTS 181
Query: 181 -ISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLHR 239
S R FEAR + S + + R L+GC + ++C + E ++K +E
Sbjct: 182 VTSVRTFEARDFLYVFKSFHNGPTLYDRIQSGLRGCSAILAKTCSQMEGPYIKYVEAQFN 241
Query: 240 KPVIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIA 299
KPV +G + D S + W + WL++ E G+V+Y +FGSE + +++ E+A
Sbjct: 242 KPVFLIGPV---VPDPPSGKLEEKWAT---WLNKFEGGTVIYCSFGSETFLTDDQVKELA 295
Query: 300 LGLELSKLPFFWVLKKRLGQADTEPIE--LPDGFEERTRGRGVVYTSWAPQLAILAHDSV 357
LGLE + LPFF VL + + LP+GF ER + +G++++ W Q ILAH SV
Sbjct: 296 LGLEQTGLPFFLVLNFPANVDVSAELNRALPEGFLERVKDKGIIHSGWVQQQNILAHSSV 355
Query: 358 GGFLTHAGWSSVVEALQFGMPLIVLTCYADQGLNAKLL--EEKQIVELIPRDEGDGFFTR 415
G ++ HAG+SSV+EAL +++L DQ LNAKL+ + + VE+ RDE DG+F +
Sbjct: 356 GCYVCHAGFSSVIEALVNDCQVVMLPQKGDQILNAKLVSGDMEAGVEINRRDE-DGYFGK 414
Query: 416 NSVAESLRLVLVE---EKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLN 460
+ E++ V+V+ + G++ R+ K+ K +K +Y+ N +N
Sbjct: 415 EDIKEAVEKVMVDVEKDPGKLIRENQKKWKEFLLNKDIQSKYIGNLVN 462
|
In the presence of other necessary color factors, this glycosylation reaction allows the accumulation of anthocyanin pigments. Petunia hybrida (taxid: 4102) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 1 EC: 5 |
| >sp|Q9LJA6|U79B4_ARATH UDP-glycosyltransferase 79B4 OS=Arabidopsis thaliana GN=UGT79B4 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 233 bits (593), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 150/467 (32%), Positives = 242/467 (51%), Gaps = 32/467 (6%)
Query: 5 SKLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNL-ASMIQFV 63
SK ++PW FGHMIP+L LA +A+KGH++ F++ + +L P NL + I F
Sbjct: 3 SKFHAFLYPWFGFGHMIPYLHLANKLAEKGHRVTFLAPKKAQKQLE--PLNLFPNSIHFE 60
Query: 64 KISLPHVDNLRENAEATIDLPYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAAYWL 123
++LPHVD L AE T DLP + L + D L E + ++SL PD + FDF W+
Sbjct: 61 NVTLPHVDGLPVGAETTADLPNSSKRVLADAMDLLREQIEVKIRSLKPDLIFFDFVD-WI 119
Query: 124 PARARELGIPSGFFSIFTAATLG-YFGPSSVLINDSGDHLKTPEDYTRVPNWVSFPTT-I 181
P A+ELGI S + I +AA + +F P + L +P FP++ +
Sbjct: 120 PQMAKELGIKSVSYQIISAAFIAMFFAPRA--------ELGSPPP--------GFPSSKV 163
Query: 182 SYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLHRKP 241
+ R +A ++ + + + R LK CD++A+R+C E E +E+ ++
Sbjct: 164 ALRGHDA-NIYSLFANTRKFLFD--RVTTGLKNCDVIAIRTCAEIEGNLCDFIERQCQRK 220
Query: 242 VIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALG 301
V+ G + D W + WL+ E SVVY AFG+ ++ E+ LG
Sbjct: 221 VLLTGPMFLDPQGKSGKPLEDRWNN---WLNGFEPSSVVYCAFGTHFFFEIDQFQELCLG 277
Query: 302 LELSKLPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFL 361
+EL+ LPF + G + + LP+GFEER +GRG+V+ W Q IL+H S+G F+
Sbjct: 278 MELTGLPFLVAVMPPRGSSTIQE-ALPEGFEERIKGRGIVWGGWVEQPLILSHPSIGCFV 336
Query: 362 THAGWSSVVEALQFGMPLIVLTCYADQGLNAKLL-EEKQIVELIPRDEGDGFFTRNSVAE 420
H G+ S+ E+L ++ + DQ L +LL EE ++ + RDE G+F++ S+ +
Sbjct: 337 NHCGFGSMWESLVSDCQIVFIPQLVDQVLTTRLLTEELEVSVKVKRDEITGWFSKESLRD 396
Query: 421 SLRLVLVE--EKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLKNH 465
+++ V+ + E G + R K++K G Y D F++ L+NH
Sbjct: 397 TVKSVMDKNSEIGNLVRRNHKKLKETLVSPGLLSSYADKFVDELENH 443
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
| >sp|Q9XIQ5|U7B10_ARATH UDP-glycosyltransferase 79B10 OS=Arabidopsis thaliana GN=UGT79B10 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 222 bits (565), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 147/457 (32%), Positives = 235/457 (51%), Gaps = 29/457 (6%)
Query: 11 MFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHV 70
MFPW AFGHM P+L LA +A++GH+I F+ + +L L I F +++PHV
Sbjct: 9 MFPWFAFGHMTPYLHLANKLAERGHRITFLIPKKAQKQLEHL-NLFPDSIVFHSLTIPHV 67
Query: 71 DNLRENAEATIDLPYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAAYWLPARAREL 130
D L AE D+P K+L + D + + + +L+PD +LFD A+ W+P A+E
Sbjct: 68 DGLPAGAETFSDIPMPLWKFLPPAIDLTRDQVEAAVSALSPDLILFDIAS-WVPEVAKEY 126
Query: 131 GIPSGFFSIFTAATLGY-FGPSSVLINDSGDHLKTPEDYTRVPNWVSFPTTISYRLFEAR 189
+ S ++I +A ++ + F P G L P P + S + + YR +A
Sbjct: 127 RVKSMLYNIISATSIAHDFVP--------GGELGVPP-----PGYPS--SKLLYRKHDAH 171
Query: 190 KVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLHRKPVIPVGQLP 249
+ + + SH R L CD +++R+C E E ++ + LE+ + K V G P
Sbjct: 172 ALLSFSVYYK-RFSH--RLITGLMNCDFISIRTCKEIEGKFCEYLERQYHKKVFLTG--P 226
Query: 250 TTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELSKLPF 309
D W WL+ E+GSVV+ A GS+ +++ E+ LG+EL+ LPF
Sbjct: 227 MLPEPNKGKPLEDRW---SHWLNGFEQGSVVFCALGSQVTLEKDQFQELCLGIELTGLPF 283
Query: 310 FWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSV 369
F + G A T LP+GFEER + RGVV W Q +LAH SVG FL+H G+ S+
Sbjct: 284 FVAVTPPKG-AKTIQDALPEGFEERVKDRGVVLGEWVQQPLLLAHPSVGCFLSHCGFGSM 342
Query: 370 VEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVL--V 427
E++ +++L ADQ LN +L+ E+ V + + E G+F++ S++ ++ V+
Sbjct: 343 WESIMSDCQIVLLPFLADQVLNTRLMTEELKVSVEVQREETGWFSKESLSVAITSVMDQA 402
Query: 428 EEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLKN 464
E G + R ++K + G Y D F++ L+N
Sbjct: 403 SEIGNLVRRNHSKLKEVLVSDGLLTGYTDKFVDTLEN 439
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
| >sp|Q9FN28|U79B9_ARATH UDP-glycosyltransferase 79B9 OS=Arabidopsis thaliana GN=UGT79B9 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 221 bits (563), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 144/456 (31%), Positives = 233/456 (51%), Gaps = 27/456 (5%)
Query: 11 MFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHV 70
MFPW AFGHM P+L LA +A KGH++ F+ P+ + I F +++PHV
Sbjct: 9 MFPWFAFGHMTPYLHLANKLAAKGHRVTFL-LPKKAQKQLEHHNLFPDRIIFHSLTIPHV 67
Query: 71 DNLRENAEATIDLPYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAAYWLPARAREL 130
D L AE D+P K+L + D + + +++L PD + FD AYW+P A+E
Sbjct: 68 DGLPAGAETASDIPISLGKFLTAAMDLTRDQVEAAVRALRPDLIFFD-TAYWVPEMAKEH 126
Query: 131 GIPSGFFSIFTAATLGYFGPSSVLINDSGDHLKTPEDYTRVPNWVSFPTTISYRLFEARK 190
+ S + + +A ++ + L+ G L P P + S + + YR +A
Sbjct: 127 RVKSVIYFVISANSIAH-----ELV--PGGELGVPP-----PGYPS--SKVLYRGHDAHA 172
Query: 191 VFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLHRKPVIPVGQLPT 250
+ I E YR LK CD +++R+C E E ++ +E+ +++ V+ G P
Sbjct: 173 LLTFSIFYERL---HYRITTGLKNCDFISIRTCKEIEGKFCDYIERQYQRKVLLTG--PM 227
Query: 251 TTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELSKLPFF 310
+S D W WL++ + GSV+Y A GS+ +++ E+ LG+EL+ LPF
Sbjct: 228 LPEPDNSRPLEDRW---NHWLNQFKPGSVIYCALGSQITLEKDQFQELCLGMELTGLPFL 284
Query: 311 WVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVV 370
+K G A T LP+GFEER + GVV+ W Q ILAH SVG F+TH G+ S+
Sbjct: 285 VAVKPPKG-AKTIQEALPEGFEERVKNHGVVWGEWVQQPLILAHPSVGCFVTHCGFGSMW 343
Query: 371 EALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLVE-- 428
E+L +++L DQ LN +L+ E+ V + + E G+F++ S++ ++ V+ +
Sbjct: 344 ESLVSDCQIVLLPYLCDQILNTRLMSEELEVSVEVKREETGWFSKESLSVAITSVMDKDS 403
Query: 429 EKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLKN 464
E G + R ++K + G Y D F+ L+N
Sbjct: 404 ELGNLVRRNHAKLKEVLVSPGLLTGYTDEFVETLQN 439
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
| >sp|Q9LVW3|U79B1_ARATH UDP-glycosyltransferase 79B1 OS=Arabidopsis thaliana GN=UGT79B1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 214 bits (546), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 144/463 (31%), Positives = 249/463 (53%), Gaps = 19/463 (4%)
Query: 3 DNSKLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNL-ASMIQ 61
++S + I M+PWLAFGHM P+L L+ +A+KGHKI F+ + +++L P NL ++I
Sbjct: 8 ESSSMSIVMYPWLAFGHMTPFLHLSNKLAEKGHKIVFLLPKKALNQLE--PLNLYPNLIT 65
Query: 62 FVKISLPHVDNLRENAEATIDLPYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAAY 121
F IS+P V L AE D+P+ L + D + + +++ PD + +D +A+
Sbjct: 66 FHTISIPQVKGLPPGAETNSDVPFFLTHLLAVAMDQTRPEVETIFRTIKPDLVFYD-SAH 124
Query: 122 WLPARARELGIPSGFFSIFTAATLGY-FGPSSVLINDSGDHLKTPEDYTRVPNWVSFPTT 180
W+P A+ +G + F+I +AA++ PS+ G + + E+ + P + +P++
Sbjct: 125 WIPEIAKPIGAKTVCFNIVSAASIALSLVPSAEREVIDGKEM-SGEELAKTP--LGYPSS 181
Query: 181 -ISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLHR 239
+ R EA+ + + E+ S +++ CD +A+R+C E E ++ + + +
Sbjct: 182 KVVLRPHEAKSLSFVWRKHEAIGSFFDGKVTAMRNCDAIAIRTCRETEGKFCDYISRQYS 241
Query: 240 KPVIPVGQLPTTTGDGDSDAETD-TWRSIKEWLDEQEKGSVVYVAFGSEAKPSQ-EELTE 297
KPV G P G + D W EWL + GSVV+ AFGS+ ++ ++ E
Sbjct: 242 KPVYLTG--PVLPGSQPNQPSLDPQW---AEWLAKFNHGSVVFCAFGSQPVVNKIDQFQE 296
Query: 298 IALGLELSKLPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSV 357
+ LGLE + PF +K G + E LP+GF+ER +GRGVV+ W Q +L H SV
Sbjct: 297 LCLGLESTGFPFLVAIKPPSGVSTVEE-ALPEGFKERVQGRGVVFGGWIQQPLVLNHPSV 355
Query: 358 GGFLTHAGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNS 417
G F++H G+ S+ E+L ++++ + +Q LNA+L+ E+ V + E G+F+R S
Sbjct: 356 GCFVSHCGFGSMWESLMSDCQIVLVPQHGEQILNARLMTEEMEVAVEVEREKKGWFSRQS 415
Query: 418 VAESLRLVLVE--EKGQIYRDKAKEMKGLFGDKGRHDRYVDNF 458
+ +++ V+ E E G+ R + + + D G D Y+D F
Sbjct: 416 LENAVKSVMEEGSEIGEKVRKNHDKWRCVLTDSGFSDGYIDKF 458
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 478 | ||||||
| 224144306 | 466 | predicted protein [Populus trichocarpa] | 0.966 | 0.991 | 0.630 | 1e-168 | |
| 255583255 | 471 | UDP-glucosyltransferase, putative [Ricin | 0.972 | 0.987 | 0.630 | 1e-167 | |
| 225469538 | 479 | PREDICTED: UDP-glycosyltransferase 91A1 | 0.970 | 0.968 | 0.609 | 1e-166 | |
| 224053242 | 475 | predicted protein [Populus trichocarpa] | 0.968 | 0.974 | 0.631 | 1e-166 | |
| 224120552 | 475 | predicted protein [Populus trichocarpa] | 0.983 | 0.989 | 0.608 | 1e-165 | |
| 224103105 | 471 | predicted protein [Populus trichocarpa] | 0.983 | 0.997 | 0.604 | 1e-164 | |
| 359495871 | 480 | PREDICTED: UDP-glycosyltransferase 91A1- | 0.964 | 0.960 | 0.599 | 1e-164 | |
| 20149064 | 470 | putative anthocyanidine rhamnosyl-transf | 0.976 | 0.993 | 0.613 | 1e-163 | |
| 225469540 | 479 | PREDICTED: UDP-glycosyltransferase 91A1 | 0.958 | 0.956 | 0.610 | 1e-163 | |
| 255585666 | 480 | UDP-glucosyltransferase, putative [Ricin | 0.974 | 0.970 | 0.594 | 1e-163 |
| >gi|224144306|ref|XP_002325254.1| predicted protein [Populus trichocarpa] gi|222866688|gb|EEF03819.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 597 bits (1538), Expect = e-168, Method: Compositional matrix adjust.
Identities = 297/471 (63%), Positives = 373/471 (79%), Gaps = 9/471 (1%)
Query: 1 MADNSKLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMI 60
MA +SKL IAMFPWLAFGHMIP+LELAKLIAQKGHKI FISTPRN DRLP+L +++ +I
Sbjct: 1 MAGSSKLHIAMFPWLAFGHMIPYLELAKLIAQKGHKISFISTPRNTDRLPKLHPSISPLI 60
Query: 61 QFVKISLPHVDNLRENAEATIDLPYDEVKYLKQSFDCLEEPMAKLLQSLAP-DWLLFDFA 119
FVK+SLP V+NL ++AEAT D+PYD+V+YLKQ+ D L+EP++K L++ D +LF FA
Sbjct: 61 TFVKLSLPQVENLSKDAEATADVPYDKVQYLKQACDDLKEPLSKFLETCDDLDCILFYFA 120
Query: 120 AYWLPARARELGIPSGFFSIFTAATLGYFGPSSVLINDSGDHLKTPEDYTRVPNWVSFPT 179
YWLP A LGIPS FFSIFTAA L Y P+S + D PED+T P WV+FPT
Sbjct: 121 PYWLPDIATSLGIPSVFFSIFTAAMLSYVKPASGI-----DDRSKPEDFTIPPKWVTFPT 175
Query: 180 TISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLHR 239
+ +RLFE ++F ++ + VS YR + +KGCD++AVRSCMEFEPEWL+LLE++H
Sbjct: 176 NVVFRLFEVLRIFYQTLAG-NVVSDLYRTQEGIKGCDMIAVRSCMEFEPEWLQLLEEIHG 234
Query: 240 KPVIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIA 299
KPVIPVG L TT D + E + WRSIK+WLD+Q++GSVVY+AFGSEAKPSQ ELTEIA
Sbjct: 235 KPVIPVGVLATTVYD--TGVENEAWRSIKDWLDKQKQGSVVYIAFGSEAKPSQVELTEIA 292
Query: 300 LGLELSKLPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGG 359
LGLELS LPFFWVL+K G ADTE IELP+GFEER++ +G+V+TSWAPQL ILAHDSVGG
Sbjct: 293 LGLELSGLPFFWVLRKHRGSADTELIELPEGFEERSKAQGLVWTSWAPQLKILAHDSVGG 352
Query: 360 FLTHAGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVA 419
FLTH+GWSSVVEALQ LI+LT ADQG+NA++LE+K++ IPR+E +G+FTR+SVA
Sbjct: 353 FLTHSGWSSVVEALQHARALILLTFLADQGINARVLEDKKMGYSIPRNEKNGYFTRDSVA 412
Query: 420 ESLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLKNHRCLRK 470
ESLRLV+ +E+G+IYRDK KEMK LF DK R D+YVD +++L++H +K
Sbjct: 413 ESLRLVMEKEEGKIYRDKVKEMKPLFADKDRQDKYVDKLVDHLRSHGRTKK 463
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255583255|ref|XP_002532392.1| UDP-glucosyltransferase, putative [Ricinus communis] gi|223527916|gb|EEF30004.1| UDP-glucosyltransferase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 593 bits (1528), Expect = e-167, Method: Compositional matrix adjust.
Identities = 297/471 (63%), Positives = 368/471 (78%), Gaps = 6/471 (1%)
Query: 1 MADNSKLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMI 60
MAD+S+L I MFPWLAFGHMIP+LELAK IAQKGHK+ F+S+PRNIDRLP+LP NL+ I
Sbjct: 1 MADHSELHIVMFPWLAFGHMIPYLELAKHIAQKGHKVSFVSSPRNIDRLPKLPPNLSPYI 60
Query: 61 QFVKISLPHVDNLRENAEATIDLPYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAA 120
+FVK+ LPHV L ++AEAT D+PYD+V+YLK+++D L+EP+ K L++ P WLL+DFA
Sbjct: 61 KFVKLRLPHVAGLPQDAEATTDVPYDKVQYLKKAYDGLKEPLTKFLETSDPHWLLYDFAP 120
Query: 121 YWLPARARELGIPSGFFSIFTAATLGYFGPSSVLINDSGDHLKTPEDYTRVPNWVSFPTT 180
YWLP A+ LGI + FFSIF AA+L + P S + ++ PED+T P WVSFP+
Sbjct: 121 YWLPDVAKNLGISNAFFSIFLAASLSFVKPHSWI-----EYRSKPEDFTVPPKWVSFPSK 175
Query: 181 ISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLHRK 240
+++RL E ++FD++ DES+VS YR + +KGCD+V VRSC+EFEPEWL LLE+ H K
Sbjct: 176 VTFRLHEILRIFDVVTGDESDVSDIYRMEEVVKGCDVVVVRSCVEFEPEWLHLLEENHGK 235
Query: 241 PVIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIAL 300
P IPVG L TT + + D E + WRSIKEWLD+QEKGSVVYVAFGSEAKP+Q EL EIA
Sbjct: 236 PSIPVGMLATTEYNSE-DEEPEAWRSIKEWLDKQEKGSVVYVAFGSEAKPTQVELNEIAF 294
Query: 301 GLELSKLPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGF 360
GLE S LPFFWVLKKR G ADTE IELPDGFEERT+ RG+V TSWAPQL ILAH S+GGF
Sbjct: 295 GLEFSGLPFFWVLKKRRGIADTEVIELPDGFEERTKERGMVCTSWAPQLKILAHGSIGGF 354
Query: 361 LTHAGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAE 420
LTH+GWSSVVEA+Q+ LI+LT ADQ NA+LLEEK++ IPR+E DG F R+SVAE
Sbjct: 355 LTHSGWSSVVEAIQYERALILLTFLADQSFNARLLEEKKMGYPIPRNEIDGSFNRDSVAE 414
Query: 421 SLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLKNHRCLRKG 471
SLRLV+V+E+G IYR+K KEMKGLF D+ + YVDNFL+YL +H +K
Sbjct: 415 SLRLVMVKEEGNIYREKVKEMKGLFADREKQGSYVDNFLDYLHSHARSKKN 465
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225469538|ref|XP_002270260.1| PREDICTED: UDP-glycosyltransferase 91A1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 592 bits (1526), Expect = e-166, Method: Compositional matrix adjust.
Identities = 287/471 (60%), Positives = 358/471 (76%), Gaps = 7/471 (1%)
Query: 3 DNSKLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQF 62
D++KL I +FPWLAFGHMIP+LELAKL+AQ+GH + F+STPRNIDRLP+LP NL I F
Sbjct: 11 DDAKLHIVLFPWLAFGHMIPYLELAKLVAQRGHHVSFVSTPRNIDRLPKLPPNLTPFISF 70
Query: 63 VKISLPHVDNLRENAEATIDLPYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAAYW 122
VKI LPHV NL ENAEAT DLP ++V++LKQ+++ LEE + L + APDW+L DF AYW
Sbjct: 71 VKIPLPHVPNLPENAEATTDLPENKVQFLKQAYNLLEEGITGFLDAAAPDWVLHDFTAYW 130
Query: 123 LPARARELGIPSGFFSIFTAATLGYFGPSSVLINDSGDHLKTPEDYTRVPNWVSFPTTIS 182
L A +LGI GF SIFTA+ L +F PS DH PED+T P WV FP+ ++
Sbjct: 131 LVPIATKLGIACGFLSIFTASVLCFFNPSG------QDHRTEPEDFTVAPKWVPFPSRVA 184
Query: 183 YRLFEARKVFDILIS-DESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLHRKP 241
+R FE K+F+ I+ D S S +RF ++GCD++AVRSC E EPEWL+LLEQL++KP
Sbjct: 185 FRYFEVVKIFNNAIAGDASGTSDMHRFEACIRGCDLLAVRSCTELEPEWLRLLEQLYQKP 244
Query: 242 VIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALG 301
V+PVGQLP +G D E +TW IK WLD+Q GSVVYVAFGSEAKP+Q ELTEIALG
Sbjct: 245 VVPVGQLPPILPNGGDDDEDETWLEIKCWLDKQAGGSVVYVAFGSEAKPNQTELTEIALG 304
Query: 302 LELSKLPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFL 361
LE S+LPFFW LK + G DTE I+LP+GF+ERT+GRGVV TSWAPQL IL+H S+ GFL
Sbjct: 305 LEQSELPFFWALKLKRGPCDTEVIQLPEGFKERTKGRGVVCTSWAPQLKILSHPSICGFL 364
Query: 362 THAGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAES 421
+H+GW+SVVEALQ PLI+LT ADQGLNA L EK++ LIPR+E DG FTR +VA+S
Sbjct: 365 SHSGWTSVVEALQLERPLILLTFLADQGLNASFLREKKMGCLIPRNEEDGSFTREAVAQS 424
Query: 422 LRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLKNHRCLRKGE 472
LRLV+VEE G+IYRDKAKEM+G+FGD+ R ++YVD ++ LK HR + K +
Sbjct: 425 LRLVVVEEGGKIYRDKAKEMRGVFGDRDRQNQYVDTLVSCLKEHRHIHKAK 475
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224053242|ref|XP_002297733.1| predicted protein [Populus trichocarpa] gi|222844991|gb|EEE82538.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 590 bits (1522), Expect = e-166, Method: Compositional matrix adjust.
Identities = 297/470 (63%), Positives = 363/470 (77%), Gaps = 7/470 (1%)
Query: 1 MADNSKLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMI 60
MAD+SKL IAMFPWLAFGHMIP+LELAKLIAQKGHKI FISTPRNIDRLP+LP L+ +I
Sbjct: 1 MADDSKLHIAMFPWLAFGHMIPYLELAKLIAQKGHKITFISTPRNIDRLPKLPPYLSPLI 60
Query: 61 QFVKISLPHVDNLRENAEATIDLPYDEVKYLKQSFDCLEEPMAKLL-QSLAPDWLLFDFA 119
FVK+ LPH +L E EAT D+PY++V+YLK +FD L+EPM + L S D+LL+DFA
Sbjct: 61 NFVKLPLPHAAHLLEGDEATTDVPYNKVQYLKVAFDGLKEPMTRFLATSHDIDYLLYDFA 120
Query: 120 AYWLPARARELGIPSGFFSIFTAATLGYFGPSSVLINDSGDHLKTPEDYTRVPNWVSFPT 179
YWLP A LGIP+ FFSIF A + + P+S LI D + PE +T P + FPT
Sbjct: 121 PYWLPEIATGLGIPNAFFSIFLGAAVCFLKPAS-LIEDRTE----PEHFTVPPKSIPFPT 175
Query: 180 TISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLHR 239
T+ ++LFE ++F+ + D S+VS YR + L+ C +VA+RSCMEFEPEWL L ++L
Sbjct: 176 TVRFKLFEILRIFESVTGDASDVSDIYRLQEVLRCCQMVAIRSCMEFEPEWLHLFQELIG 235
Query: 240 KPVIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIA 299
KPVIPVG L T D D + W+S+K+WLD+QEKGSVVYVAFGSEAKPSQ ELTEIA
Sbjct: 236 KPVIPVGLLAPTEDDAVRDEGSGMWKSMKDWLDKQEKGSVVYVAFGSEAKPSQVELTEIA 295
Query: 300 LGLELSKLPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGG 359
LGLELS LPFFWVL+ R G D E I+LP+GFE+RTRGRG+V+TSW PQL ILAHDSVGG
Sbjct: 296 LGLELSGLPFFWVLRTRRGLTDNEVIKLPEGFEDRTRGRGLVFTSWVPQLKILAHDSVGG 355
Query: 360 FLTHAGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVA 419
FLTH+GWSSVVEALQ LI+L+ A+QGLN+++ EEK+I IPRDE DG FTR+SVA
Sbjct: 356 FLTHSGWSSVVEALQHERALILLSFLAEQGLNSRVFEEKKIGYPIPRDESDGSFTRDSVA 415
Query: 420 ESLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLKNH-RCL 468
ESLRLV+V+E+G+IYR+KAKEMKGLFG+K D+YV NFL Y+ +H RCL
Sbjct: 416 ESLRLVMVKEEGKIYREKAKEMKGLFGNKDIQDQYVVNFLRYIMSHRRCL 465
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224120552|ref|XP_002318358.1| predicted protein [Populus trichocarpa] gi|222859031|gb|EEE96578.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 588 bits (1516), Expect = e-165, Method: Compositional matrix adjust.
Identities = 288/473 (60%), Positives = 363/473 (76%), Gaps = 3/473 (0%)
Query: 1 MAD-NSKLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASM 59
MAD + K+ +AMFPWLAFGHM+PWLELAKL A KGHKI FISTPRNIDRLP+ P +++S
Sbjct: 1 MADSDDKIHVAMFPWLAFGHMMPWLELAKLFAAKGHKISFISTPRNIDRLPKPPADVSST 60
Query: 60 IQFVKISLPHVDNLRENAEATIDLPYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFA 119
+ FVK+ LP V+ L +AEATIDLP ++V+YLK + D ++EP AK+L+SL PDW+ +DFA
Sbjct: 61 LHFVKLPLPQVEGLPPDAEATIDLPANKVQYLKTALDKVQEPFAKVLESLNPDWIFYDFA 120
Query: 120 AYWLPARARELGIPSGFFSIFTAATLGYFGPSSVLINDSGDHLKTPEDYTRVPNWVSFPT 179
YW A +LGI S +FSI AA + + GP S LI D D+ K PED+T P WVSF T
Sbjct: 121 QYWTGPIAAQLGIKSTYFSICIAAMVAFLGPPSPLI-DGDDYRKKPEDFTIPPKWVSFQT 179
Query: 180 TISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLHR 239
T++Y+ ++ FD + D S V+ R+G L+ CD +AVRS E EPEWL++LE +H
Sbjct: 180 TVAYKYYDIMNTFDCVEDDASGVNDLKRWGLCLQSCDFIAVRSSFEIEPEWLQVLETIHE 239
Query: 240 KPVIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIA 299
KPV PVGQLP + + + +D W S+K+WLD QEK SVVYVAFGSEAKPSQ +LTE+A
Sbjct: 240 KPVFPVGQLPPVEYELE-EKNSDAWSSMKKWLDMQEKSSVVYVAFGSEAKPSQAQLTELA 298
Query: 300 LGLELSKLPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGG 359
LGLELS LPFFWVL+ R G DT+ IELP GFEERT+G+GVV T+WAPQL ILAH+S+ G
Sbjct: 299 LGLELSGLPFFWVLRTRRGITDTDLIELPPGFEERTKGQGVVCTTWAPQLMILAHESIAG 358
Query: 360 FLTHAGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVA 419
FLTH+GWSSVVEAL F LI+LT Y+DQG+NA++LEEK+I IPR+E DG FTR+SVA
Sbjct: 359 FLTHSGWSSVVEALTFQKALILLTFYSDQGINARVLEEKKIGYSIPRNELDGSFTRDSVA 418
Query: 420 ESLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLKNHRCLRKGE 472
ESLRLV+V E+G++YRDKAKEM GLFGD+ R D+YVDN L YLK+HR ++K +
Sbjct: 419 ESLRLVMVSEEGKMYRDKAKEMSGLFGDRDRQDKYVDNILIYLKSHRPVKKAK 471
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224103105|ref|XP_002334090.1| predicted protein [Populus trichocarpa] gi|222839602|gb|EEE77939.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 585 bits (1508), Expect = e-164, Method: Compositional matrix adjust.
Identities = 286/473 (60%), Positives = 362/473 (76%), Gaps = 3/473 (0%)
Query: 1 MAD-NSKLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASM 59
MAD + K+ +AMFPWLAFGHM+PWLELAKL A KGHKI FISTPRNIDRLP+ P +++S
Sbjct: 1 MADSDDKIHVAMFPWLAFGHMMPWLELAKLFAAKGHKISFISTPRNIDRLPKPPADVSST 60
Query: 60 IQFVKISLPHVDNLRENAEATIDLPYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFA 119
+ FVK+ LP V+ L +AEATIDLP ++V+YLK + D ++EP AK+L+SL PDW+ +DFA
Sbjct: 61 LHFVKLPLPQVEGLPPDAEATIDLPANKVQYLKIALDKVQEPFAKVLESLNPDWIFYDFA 120
Query: 120 AYWLPARARELGIPSGFFSIFTAATLGYFGPSSVLINDSGDHLKTPEDYTRVPNWVSFPT 179
YW A +LGI S +FSI AA + + GP S LI D D+ K PED+T P WVSF T
Sbjct: 121 QYWTGPIAAQLGIKSTYFSICIAAMVAFLGPPSPLI-DGDDYRKKPEDFTIPPKWVSFQT 179
Query: 180 TISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLHR 239
T++Y+ ++ FD + D S V+ R+G L+ CD +AVRS E EPEWL++LE +H
Sbjct: 180 TVAYKYYDIVNTFDCVEDDASGVNDLKRWGLCLQSCDFIAVRSSFEIEPEWLQVLETIHE 239
Query: 240 KPVIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIA 299
KPV PVGQLP + + + +D W S+K+W D QEK SVVYVAFGSEAKPSQ +LTE+A
Sbjct: 240 KPVFPVGQLPPVEYELE-EKNSDAWSSMKKWFDMQEKSSVVYVAFGSEAKPSQAQLTELA 298
Query: 300 LGLELSKLPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGG 359
LGLELS LPFFWVL+ R G ADT+ IELP GFEERT+G+GVV T+WAPQL ILAH+S+ G
Sbjct: 299 LGLELSGLPFFWVLRTRRGIADTDLIELPPGFEERTKGQGVVCTTWAPQLMILAHESIAG 358
Query: 360 FLTHAGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVA 419
FLTH+GWSSVVEAL F PL++LT Y+DQG+NA++LEEK+I IPR+E DG FTR+SVA
Sbjct: 359 FLTHSGWSSVVEALTFQKPLVLLTFYSDQGINARVLEEKKIGYSIPRNELDGSFTRDSVA 418
Query: 420 ESLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLKNHRCLRKGE 472
ESLRLV+V E+G++YRDKAKEM LFGD+ R +YVDN L YLK+HR ++K +
Sbjct: 419 ESLRLVMVSEEGKMYRDKAKEMSSLFGDRDRQGKYVDNILIYLKSHRPVKKAK 471
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359495871|ref|XP_003635105.1| PREDICTED: UDP-glycosyltransferase 91A1-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 584 bits (1506), Expect = e-164, Method: Compositional matrix adjust.
Identities = 280/467 (59%), Positives = 359/467 (76%), Gaps = 6/467 (1%)
Query: 4 NSKLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFV 63
+++L + MFPWLAFGHMIP+LELAKLIAQ G+ + F+STPRNIDRLP+LP NLA I FV
Sbjct: 12 DAQLHVVMFPWLAFGHMIPYLELAKLIAQSGNHVSFVSTPRNIDRLPKLPPNLAPFITFV 71
Query: 64 KISLPHVDNLRENAEATIDLPYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAAYWL 123
K+ LPHV NL ENAEAT DLP D+V++LK ++D L++PMA+ L + PDW++ DFA YWL
Sbjct: 72 KLPLPHVPNLLENAEATADLPNDKVQFLKVAYDLLQQPMARFLDAADPDWVIHDFAPYWL 131
Query: 124 PARARELGIPSGFFSIFTAATLGYFGPSSVLINDSGDHLKTPEDYTRVPNWVSFPTTISY 183
A +LGI FFSIF A+ + +F P D ++ P+ +T P WV F + +++
Sbjct: 132 GPIATKLGISCAFFSIFNASCVSFFTP-----GDQLEYRSEPDHFTVPPKWVPFQSKVAF 186
Query: 184 RLFEARKVF-DILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLHRKPV 242
R FE +K+ + L D S +S YR +S++GCD++AVRSC E EPEWL+LLEQL+RKPV
Sbjct: 187 RYFEIKKIISEGLSGDASGISFKYRLTESIEGCDLLAVRSCFELEPEWLRLLEQLNRKPV 246
Query: 243 IPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGL 302
IPVGQL D D + +TW+ IKEWLD+ +GSVVYVAFGSEAKP+Q E+TEIALGL
Sbjct: 247 IPVGQLAPELDDRGDDGKDETWQQIKEWLDKLARGSVVYVAFGSEAKPNQTEITEIALGL 306
Query: 303 ELSKLPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLT 362
E S+LPFFWVLK LG +DTE ++LP+GFEERT+GRGVV TSWAPQL IL+HDS+GGFL+
Sbjct: 307 EQSELPFFWVLKMSLGPSDTEMVKLPEGFEERTKGRGVVCTSWAPQLKILSHDSIGGFLS 366
Query: 363 HAGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESL 422
H+GWSSVVEAL PLI+LT +ADQGLNA L+EK++ LIPR+ GDG FTR +VA+SL
Sbjct: 367 HSGWSSVVEALSLERPLILLTFFADQGLNASFLQEKKMGYLIPRNGGDGSFTREAVAQSL 426
Query: 423 RLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLKNHRCLR 469
RLV+VEE G+IYRDKAKEM GLF D+ + Y+DNF++YLK +R ++
Sbjct: 427 RLVMVEEGGKIYRDKAKEMSGLFRDRDKQKHYMDNFVSYLKAYRRIK 473
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|20149064|gb|AAM12787.1| putative anthocyanidine rhamnosyl-transferase [Capsicum annuum] | Back alignment and taxonomy information |
|---|
Score = 582 bits (1501), Expect = e-163, Method: Compositional matrix adjust.
Identities = 289/471 (61%), Positives = 373/471 (79%), Gaps = 4/471 (0%)
Query: 1 MADN-SKLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASM 59
MA+N KL IA+FPWLAFGHMIP+LEL+KLIA+KGH + FISTPRNIDRLP+LP NL+
Sbjct: 1 MAENGKKLHIAVFPWLAFGHMIPYLELSKLIARKGHTVSFISTPRNIDRLPKLPPNLSQF 60
Query: 60 IQFVKISLPHVDNLRENAEATIDLPYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFA 119
++FVK+ +PHV+ L ENAEATID+P+++VKYLK + D LEE MAK L+ APD++ FDF
Sbjct: 61 LKFVKLPMPHVEKLPENAEATIDVPFEQVKYLKLAQDGLEESMAKFLEDSAPDFIFFDFT 120
Query: 120 AYWLPARARELGIPSGFFSIFTAATLGYFGPSSVLINDSGDHLKTPEDYTRVPNWVSFPT 179
+YW+P+ A + IP+ +FSIF AA LG+ GP L ND + KTPE+YT P WVSF T
Sbjct: 121 SYWVPSVASKFNIPTAYFSIFIAAFLGFAGPVPGLNNDY-EIRKTPEEYTVPPKWVSFET 179
Query: 180 TISYRLFEARKVFDILIS-DESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLH 238
T++++LFE ++F+ + DE N++ RF +S++ CD VRSC EFEPEWLK+++ +H
Sbjct: 180 TVAWKLFEVSRIFEASMEGDEENIADITRFYKSVENCDFFLVRSCSEFEPEWLKVIQDIH 239
Query: 239 RKPVIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEI 298
RKPV PVGQLPTTT + D + + WR IK WLD+QEKG V+YVAFGSEAKPSQ ELTE+
Sbjct: 240 RKPVFPVGQLPTTTYE-DETTKINAWREIKFWLDKQEKGRVIYVAFGSEAKPSQNELTEL 298
Query: 299 ALGLELSKLPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVG 358
+LGLELS LPFFWVL+ + G++D E I LP+GFEERT+GRG+V TSWAPQL IL+HDS+G
Sbjct: 299 SLGLELSGLPFFWVLRTKRGESDDELICLPEGFEERTKGRGIVCTSWAPQLKILSHDSIG 358
Query: 359 GFLTHAGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSV 418
GFLTH+GWSSVVEA+QF PL++LT ADQG+NA+LLEEK++ IPR++ DG FTR+SV
Sbjct: 359 GFLTHSGWSSVVEAIQFEKPLVLLTFLADQGINARLLEEKKMAYSIPRNDRDGSFTRDSV 418
Query: 419 AESLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLKNHRCLR 469
AES+ +VLV+E+G+IYR K KE+K LF DK R D YV N L+YL+N++ R
Sbjct: 419 AESVSMVLVKEEGEIYRKKVKEVKYLFCDKKRQDNYVKNLLSYLQNYKKTR 469
|
Source: Capsicum annuum Species: Capsicum annuum Genus: Capsicum Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225469540|ref|XP_002270294.1| PREDICTED: UDP-glycosyltransferase 91A1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 581 bits (1497), Expect = e-163, Method: Compositional matrix adjust.
Identities = 284/465 (61%), Positives = 348/465 (74%), Gaps = 7/465 (1%)
Query: 3 DNSKLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQF 62
D++KL I +FPWLAFGHMIP+LELAKL+AQ+GH + F+STPRNIDRLP+LP NL I F
Sbjct: 11 DDAKLHIVLFPWLAFGHMIPYLELAKLVAQRGHHVSFVSTPRNIDRLPKLPPNLTPFISF 70
Query: 63 VKISLPHVDNLRENAEATIDLPYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAAYW 122
VKI LPHV NL ENAEAT DLP ++V +LKQ+++ LEE + L + APDW+L DF AYW
Sbjct: 71 VKIPLPHVPNLPENAEATTDLPENKVPFLKQAYNLLEEGITGFLDAAAPDWVLHDFTAYW 130
Query: 123 LPARARELGIPSGFFSIFTAATLGYFGPSSVLINDSGDHLKTPEDYTRVPNWVSFPTTIS 182
L A +LGI GF SIFTA+ L +F PS DH PED+T P WV FP+ ++
Sbjct: 131 LVPIATKLGIACGFLSIFTASALCFFNPSG------QDHRTEPEDFTVAPKWVPFPSRVA 184
Query: 183 YRLFEARKVFDILIS-DESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLHRKP 241
+R FE K+F+ I+ D S S +RF L+GCD++AVRSC E EPEWL+LLEQL++KP
Sbjct: 185 FRYFEVVKIFNNAIAGDASGTSDMHRFEACLRGCDLLAVRSCTELEPEWLRLLEQLYQKP 244
Query: 242 VIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALG 301
V+PVGQLP G D E +TW IK WLD+Q GSVVYVAFGSEAKP+Q ELTEIALG
Sbjct: 245 VVPVGQLPPILPHGGDDDEDETWLEIKGWLDKQAGGSVVYVAFGSEAKPNQTELTEIALG 304
Query: 302 LELSKLPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFL 361
LE S+LPFFW LK + G D E I+LP+GFEERT+GRGVV TSWAPQL IL+H S+ GFL
Sbjct: 305 LEQSELPFFWALKLKRGPCDIEVIQLPEGFEERTKGRGVVCTSWAPQLKILSHPSICGFL 364
Query: 362 THAGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAES 421
+H+GW+SVVEALQ PLI+LT ADQGLNA L EK++ LIPR+E DG FTR +VA S
Sbjct: 365 SHSGWTSVVEALQLERPLILLTFLADQGLNASFLREKKMGCLIPRNEEDGSFTREAVARS 424
Query: 422 LRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLKNHR 466
LRLV+VEE + YRDKAKEM+ +FGD+ R ++YVD ++ LK HR
Sbjct: 425 LRLVVVEEGDKFYRDKAKEMRAVFGDRDRQNQYVDTLVSCLKEHR 469
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255585666|ref|XP_002533518.1| UDP-glucosyltransferase, putative [Ricinus communis] gi|223526615|gb|EEF28862.1| UDP-glucosyltransferase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 579 bits (1493), Expect = e-163, Method: Compositional matrix adjust.
Identities = 282/474 (59%), Positives = 359/474 (75%), Gaps = 8/474 (1%)
Query: 4 NSKLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFV 63
+ +L IAMFPWLAFGHMIP+LELAKLIAQKGHKI FISTPRNIDRLP+LP +LA I FV
Sbjct: 13 DDELHIAMFPWLAFGHMIPFLELAKLIAQKGHKISFISTPRNIDRLPKLPPHLAPFINFV 72
Query: 64 KISLPHVDNLRENAEATIDLPYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAAYWL 123
KI LP+V+NL +AEAT DLP ++V +LK+++DCL+EP++ LQS PDW++FDF +YW+
Sbjct: 73 KIPLPYVENLPRSAEATADLPAEDVVHLKKAYDCLQEPLSNFLQSSLPDWIVFDFVSYWV 132
Query: 124 PARARELGIPSGFFSIFTAATLGYFGPSSVLINDSGDHLKTPEDYTRVPNWVSFPTTISY 183
P A + IPS +FSIF +A L Y L + D+ + EDY P WV FP+ ++Y
Sbjct: 133 PDIACKFNIPSVYFSIFISACLCY------LSSGEEDYRRVIEDYIVAPKWVPFPSKVAY 186
Query: 184 RLFEARKVFDILIS-DESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLHRKPV 242
RLFE RK+F+ I+ DESN+ RF +++K CD++A R+C EPEWL+L EQLH+KPV
Sbjct: 187 RLFEVRKIFEAGITGDESNIYDIKRFQETMKNCDLIAARTCFGLEPEWLQLTEQLHQKPV 246
Query: 243 IPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGL 302
PVG LP T + + +TW+ IK+WLD QEK SVVY+AFGSEA PSQEE+ EIA GL
Sbjct: 247 FPVGVLPRETDQDSEEDQEETWKPIKKWLDRQEKRSVVYIAFGSEALPSQEEVIEIAHGL 306
Query: 303 ELSKLPFFWVLKKRLGQADTEPI-ELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFL 361
ELS LPFFWVL+K G ++ E + +LP+GFE+R + RG+V+T+WAPQL IL H+S+G FL
Sbjct: 307 ELSGLPFFWVLRKSCGLSEEEEVVDLPNGFEDRVKDRGMVFTNWAPQLRILGHESIGAFL 366
Query: 362 THAGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAES 421
TH+G SVVEALQ G PL++L +DQGLNAKLLEEK+I L+PR+E DG FTRNSVAES
Sbjct: 367 THSGICSVVEALQHGRPLVLLPFNSDQGLNAKLLEEKKIGYLMPRNEEDGSFTRNSVAES 426
Query: 422 LRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLKNHRCLRKGEEIN 475
LRLV+VEE+G+IYRDKA+EM+ LF DK R RYVD FL+YLK R G ++
Sbjct: 427 LRLVIVEEEGKIYRDKAEEMRALFTDKDRQSRYVDAFLDYLKTQRLRENGNKVT 480
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 478 | ||||||
| TAIR|locus:2066010 | 470 | AT2G22590 "AT2G22590" [Arabido | 0.956 | 0.972 | 0.566 | 6.8e-143 | |
| TAIR|locus:2156997 | 460 | AT5G49690 [Arabidopsis thalian | 0.930 | 0.967 | 0.497 | 2.6e-118 | |
| TAIR|locus:2155720 | 466 | AT5G65550 [Arabidopsis thalian | 0.951 | 0.976 | 0.480 | 1.8e-112 | |
| TAIR|locus:2093635 | 448 | AT3G29630 [Arabidopsis thalian | 0.531 | 0.566 | 0.330 | 6.1e-62 | |
| TAIR|locus:2010801 | 447 | AT1G64910 [Arabidopsis thalian | 0.583 | 0.624 | 0.323 | 2.9e-58 | |
| TAIR|locus:2154734 | 447 | AT5G53990 [Arabidopsis thalian | 0.629 | 0.673 | 0.322 | 4.8e-58 | |
| TAIR|locus:2166552 | 468 | UF3GT "UDP-glucose:flavonoid 3 | 0.928 | 0.948 | 0.311 | 1.6e-56 | |
| TAIR|locus:2059181 | 442 | AT2G22930 [Arabidopsis thalian | 0.514 | 0.556 | 0.304 | 1.8e-54 | |
| TAIR|locus:2010816 | 452 | AT1G64920 [Arabidopsis thalian | 0.525 | 0.555 | 0.314 | 2.3e-54 | |
| TAIR|locus:2137722 | 455 | AT4G27560 "AT4G27560" [Arabido | 0.525 | 0.551 | 0.314 | 1.7e-52 |
| TAIR|locus:2066010 AT2G22590 "AT2G22590" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1397 (496.8 bits), Expect = 6.8e-143, P = 6.8e-143
Identities = 265/468 (56%), Positives = 345/468 (73%)
Query: 3 DNSKLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRL-PRLPQNLASMIQ 61
D +KL + MFPWLAFGHM+P+LEL+KLIAQKGHK+ FISTPRNIDRL PRLP+NL+S+I
Sbjct: 10 DGTKLHVVMFPWLAFGHMVPYLELSKLIAQKGHKVSFISTPRNIDRLLPRLPENLSSVIN 69
Query: 62 FVKISLPHVDN-LRENAEATIDLPYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAA 120
FVK+SLP DN L E+ EAT D+P++ + YLK ++D L+ P+ + L+S PDW+L DFA
Sbjct: 70 FVKLSLPVGDNKLPEDGEATTDVPFELIPYLKIAYDGLKVPVTEFLESSKPDWVLQDFAG 129
Query: 121 YWLPARARELGIPSGFFSIFTAATLGYFGPSSVLINDSGDHLKTPEDYTRVPNWVSFPTT 180
+WLP +R LGI +GFFS F ATLG P ++ +P D+ + P WV F T+
Sbjct: 130 FWLPPISRRLGIKTGFFSAFNGATLGILKPPGF-----EEYRTSPADFMKPPKWVPFETS 184
Query: 181 ISYRLFEARKVFDILISD--ESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLH 238
++++LFE R +F +++ E NV +R G + GCD++ VRSC E+E EWL L ++LH
Sbjct: 185 VAFKLFECRFIFKGFMAETTEGNVPDIHRVGGVIDGCDVIFVRSCYEYEAEWLGLTQELH 244
Query: 239 RKPVIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEI 298
RKPVIPVG LP + D TDTW S+K+WLD ++ S+VYVAFGSEAKPSQ EL EI
Sbjct: 245 RKPVIPVGVLPPKPDEKFED--TDTWLSVKKWLDSRKSKSIVYVAFGSEAKPSQTELNEI 302
Query: 299 ALGLELSKLPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVG 358
ALGLELS LPFFWVLK R G DTEP+ELP+GFEERT RG+V+ W QL L+HDS+G
Sbjct: 303 ALGLELSGLPFFWVLKTRRGPWDTEPVELPEGFEERTADRGMVWRGWVEQLRTLSHDSIG 362
Query: 359 GFLTHAGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSV 418
LTH GW +++EA++F P+ +L DQGLNA+++EEK+I +IPRDE +GFFT+ SV
Sbjct: 363 LVLTHPGWGTIIEAIRFAKPMAMLVFVYDQGLNARVIEEKKIGYMIPRDETEGFFTKESV 422
Query: 419 AESLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLKNHR 466
A SLRLV+VEE+G++YR+ KEMKG+FGD R DRYVD+FL YL +R
Sbjct: 423 ANSLRLVMVEEEGKVYRENVKEMKGVFGDMDRQDRYVDSFLEYLVTNR 470
|
|
| TAIR|locus:2156997 AT5G49690 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1165 (415.2 bits), Expect = 2.6e-118, P = 2.6e-118
Identities = 228/458 (49%), Positives = 312/458 (68%)
Query: 7 LQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKIS 66
+ +AMFPWLA GH++P+L L+KL+AQKGHKI FISTPRNI+RLP+L NLAS I FV
Sbjct: 9 MHVAMFPWLAMGHLLPFLRLSKLLAQKGHKISFISTPRNIERLPKLQSNLASSITFVSFP 68
Query: 67 LPHVDNLRENAEATIDLPYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAAYWLPAR 126
LP + L ++E+++D+PY++ + LK +FD L+ P+ + L+ +PDW+++D+A++WLP+
Sbjct: 69 LPPISGLPPSSESSMDVPYNKQQSLKAAFDLLQPPLKEFLRRSSPDWIIYDYASHWLPSI 128
Query: 127 ARELGIPSGFFSIFTAATLGYFGPSSVLINDSGDHLKTPEDYTRVPNWVSFPTTISYRLF 186
A ELGI FFS+F AATL + GPSS LI + TPED+T VP WV F + I +R
Sbjct: 129 AAELGISKAFFSLFNAATLCFMGPSSSLIEEIRS---TPEDFTVVPPWVPFKSNIVFRYH 185
Query: 187 EARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLHRKPVIPVG 246
E + + D + VS RFG S+ D V VRSC EFEPEW LL+ L+RKPV P+G
Sbjct: 186 EVTRYVEKTEEDVTGVSDSVRFGYSIDESDAVFVRSCPEFEPEWFGLLKDLYRKPVFPIG 245
Query: 247 QLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELSK 306
LP D D+ +T TW IK+WLD+Q SVVYV+ G+EA EE+TE+ALGLE S+
Sbjct: 246 FLPPVIEDDDA-VDT-TWVRIKKWLDKQRLNSVVYVSLGTEASLRHEEVTELALGLEKSE 303
Query: 307 LPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGW 366
PFFWVL+ EP ++PDGF+ R +GRG+V+ W PQ+ IL+H+SVGGFLTH GW
Sbjct: 304 TPFFWVLRN-------EP-KIPDGFKTRVKGRGMVHVGWVPQVKILSHESVGGFLTHCGW 355
Query: 367 SSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVL 426
+SVVE L FG I +QGLN +LL K + + RDE DG F +SVA+S+RLV+
Sbjct: 356 NSVVEGLGFGKVPIFFPVLNEQGLNTRLLHGKGLGVEVSRDERDGSFDSDSVADSIRLVM 415
Query: 427 VEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLKN 464
+++ G+ R KAK MK LFG+ + RYVD + ++++
Sbjct: 416 IDDAGEEIRAKAKVMKDLFGNMDENIRYVDELVRFMRS 453
|
|
| TAIR|locus:2155720 AT5G65550 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1110 (395.8 bits), Expect = 1.8e-112, P = 1.8e-112
Identities = 226/470 (48%), Positives = 308/470 (65%)
Query: 1 MAD-NSKLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASM 59
MA+ KL +A+FPWLA GHMIP+L+L+KLIA+KGH + FIST RNI RLP + +L+
Sbjct: 1 MAEPKPKLHVAVFPWLALGHMIPYLQLSKLIARKGHTVSFISTARNISRLPNISSDLS-- 58
Query: 60 IQFVKISLPH-VDNLRENAEATIDLPYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDF 118
+ FV + L VD+L ENAEAT D+P + YLK++FD L E + L++ P+W+++D
Sbjct: 59 VNFVSLPLSQTVDHLPENAEATTDVPETHIAYLKKAFDGLSEAFTEFLEASKPNWIVYDI 118
Query: 119 AAYWLPARARELGIPSGFFSIFTAATLGYFG-PSSVLINDSGDHLKTPEDYTRVPNWVSF 177
+W+P A +LG+ F F AA++ G P+SV+I D KT ED P WV F
Sbjct: 119 LHHWVPPIAEKLGVRRAIFCTFNAASIIIIGGPASVMIQGH-DPRKTAEDLIVPPPWVPF 177
Query: 178 PTTISYRLFEARKVFDILISDESNV--SHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLE 235
T I YRLFEA+++ + + + V + R G + G +++ +RSCME EPEW++LL
Sbjct: 178 ETNIVYRLFEAKRIMEYPTAGVTGVELNDNCRLGLAYVGSEVIVIRSCMELEPEWIQLLS 237
Query: 236 QLHRKPVIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEEL 295
+L KPVIP+G LP T D D+D E TW I+EWLD + SVVYVA G+E S EE+
Sbjct: 238 KLQGKPVIPIGLLPATPMD-DADDE-GTWLDIREWLDRHQAKSVVYVALGTEVTISNEEI 295
Query: 296 TEIALGLELSKLPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHD 355
+A GLEL +LPFFW L+KR + + LPDGF+ER + RGV++T W PQ IL+H
Sbjct: 296 QGLAHGLELCRLPFFWTLRKRTRAS----MLLPDGFKERVKERGVIWTEWVPQTKILSHG 351
Query: 356 SVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTR 415
SVGGF+TH GW S VE L FG+PLI+ C DQ L A+LL I IPR+E DG FT
Sbjct: 352 SVGGFVTHCGWGSAVEGLSFGVPLIMFPCNLDQPLVARLLSGMNIGLEIPRNERDGLFTS 411
Query: 416 NSVAESLRLVLVEEKGQIYRDKA-KEMKGLFGDKGRHDRYVDNFLNYLKN 464
SVAE++R V+VEE+G+IYR+ A + K +FG+K D+Y D F+ +L+N
Sbjct: 412 ASVAETIRHVVVEEEGKIYRNNAASQQKKIFGNKRLQDQYADGFIEFLEN 461
|
|
| TAIR|locus:2093635 AT3G29630 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 366 (133.9 bits), Expect = 6.1e-62, Sum P(2) = 6.1e-62
Identities = 87/263 (33%), Positives = 138/263 (52%)
Query: 207 RFGQSLKGCDIVAVRSCMEFEPEWLKLLE-QLHRKPVIPVGQLPTTTGDGDSDAETDTWR 265
R LK CD++A+R+C E E +E Q RK ++ G E D W
Sbjct: 186 RVTTGLKNCDVIAIRTCAEIEGNLCDFIERQCQRKVLLTGPMFLDPQGKSGKPLE-DRWN 244
Query: 266 SIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELSKLPFFWVLKKRLGQADTEPI 325
+ WL+ E SVVY AFG+ ++ E+ LG+EL+ LPF + G + +
Sbjct: 245 N---WLNGFEPSSVVYCAFGTHFFFEIDQFQELCLGMELTGLPFLVAVMPPRGSSTIQEA 301
Query: 326 ELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCY 385
LP+GFEER +GRG+V+ W Q IL+H S+G F+ H G+ S+ E+L ++ +
Sbjct: 302 -LPEGFEERIKGRGIVWGGWVEQPLILSHPSIGCFVNHCGFGSMWESLVSDCQIVFIPQL 360
Query: 386 ADQGLNAKLL-EEKQIVELIPRDEGDGFFTRNSVAESLRLVLVE--EKGQIYRDKAKEMK 442
DQ L +LL EE ++ + RDE G+F++ S+ ++++ V+ + E G + R K++K
Sbjct: 361 VDQVLTTRLLTEELEVSVKVKRDEITGWFSKESLRDTVKSVMDKNSEIGNLVRRNHKKLK 420
Query: 443 GLFGDKGRHDRYVDNFLNYLKNH 465
G Y D F++ L+NH
Sbjct: 421 ETLVSPGLLSSYADKFVDELENH 443
|
|
| TAIR|locus:2010801 AT1G64910 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 375 (137.1 bits), Expect = 2.9e-58, Sum P(2) = 2.9e-58
Identities = 94/291 (32%), Positives = 154/291 (52%)
Query: 177 FPTT-ISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLE 235
+P++ + YR +A + + + SH R L CD +++R+C E E ++ + LE
Sbjct: 158 YPSSKLLYRKHDAHALLSFSVYYK-RFSH--RLITGLMNCDFISIRTCKEIEGKFCEYLE 214
Query: 236 QLHRKPVIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEEL 295
+ + K V G + G E D W WL+ E+GSVV+ A GS+ +++
Sbjct: 215 RQYHKKVFLTGPMLPEPNKG-KPLE-DRW---SHWLNGFEQGSVVFCALGSQVTLEKDQF 269
Query: 296 TEIALGLELSKLPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHD 355
E+ LG+EL+ LPFF + G A T LP+GFEER + RGVV W Q +LAH
Sbjct: 270 QELCLGIELTGLPFFVAVTPPKG-AKTIQDALPEGFEERVKDRGVVLGEWVQQPLLLAHP 328
Query: 356 SVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTR 415
SVG FL+H G+ S+ E++ +++L ADQ LN +L+ E+ V + + E G+F++
Sbjct: 329 SVGCFLSHCGFGSMWESIMSDCQIVLLPFLADQVLNTRLMTEELKVSVEVQREETGWFSK 388
Query: 416 NSVAESLRLVL--VEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLKN 464
S++ ++ V+ E G + R ++K + G Y D F++ L+N
Sbjct: 389 ESLSVAITSVMDQASEIGNLVRRNHSKLKEVLVSDGLLTGYTDKFVDTLEN 439
|
|
| TAIR|locus:2154734 AT5G53990 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 383 (139.9 bits), Expect = 4.8e-58, Sum P(2) = 4.8e-58
Identities = 102/316 (32%), Positives = 164/316 (51%)
Query: 153 VLINDSGDHLKTPEDYTRVPNWVSFPTT-ISYRLFEARKVFDILISDESNVSHGYRFGQS 211
V+ +S H P VP +P++ + YR +A + I E H YR
Sbjct: 135 VISANSIAHELVPGGELGVPP-PGYPSSKVLYRGHDAHALLTFSIFYER--LH-YRITTG 190
Query: 212 LKGCDIVAVRSCMEFEPEWLKLLEQLHRKPVIPVG-QLPTTTGDGDSDAETDTWRSIKEW 270
LK CD +++R+C E E ++ +E+ +++ V+ G LP D E D W W
Sbjct: 191 LKNCDFISIRTCKEIEGKFCDYIERQYQRKVLLTGPMLPEP--DNSRPLE-DRWN---HW 244
Query: 271 LDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELSKLPFFWVLKKRLGQADTEPIELPDG 330
L++ + GSV+Y A GS+ +++ E+ LG+EL+ LPF +K G A T LP+G
Sbjct: 245 LNQFKPGSVIYCALGSQITLEKDQFQELCLGMELTGLPFLVAVKPPKG-AKTIQEALPEG 303
Query: 331 FEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQGL 390
FEER + GVV+ W Q ILAH SVG F+TH G+ S+ E+L +++L DQ L
Sbjct: 304 FEERVKNHGVVWGEWVQQPLILAHPSVGCFVTHCGFGSMWESLVSDCQIVLLPYLCDQIL 363
Query: 391 NAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLVE--EKGQIYRDKAKEMKGLFGDK 448
N +L+ E+ V + + E G+F++ S++ ++ V+ + E G + R ++K +
Sbjct: 364 NTRLMSEELEVSVEVKREETGWFSKESLSVAITSVMDKDSELGNLVRRNHAKLKEVLVSP 423
Query: 449 GRHDRYVDNFLNYLKN 464
G Y D F+ L+N
Sbjct: 424 GLLTGYTDEFVETLQN 439
|
|
| TAIR|locus:2166552 UF3GT "UDP-glucose:flavonoid 3-o-glucosyltransferase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 582 (209.9 bits), Expect = 1.6e-56, P = 1.6e-56
Identities = 144/463 (31%), Positives = 249/463 (53%)
Query: 3 DNSKLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNL-ASMIQ 61
++S + I M+PWLAFGHM P+L L+ +A+KGHKI F+ + +++L P NL ++I
Sbjct: 8 ESSSMSIVMYPWLAFGHMTPFLHLSNKLAEKGHKIVFLLPKKALNQLE--PLNLYPNLIT 65
Query: 62 FVKISLPHVDNLRENAEATIDLPYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAAY 121
F IS+P V L AE D+P+ L + D + + +++ PD + +D +A+
Sbjct: 66 FHTISIPQVKGLPPGAETNSDVPFFLTHLLAVAMDQTRPEVETIFRTIKPDLVFYD-SAH 124
Query: 122 WLPARARELGIPSGFFSIFTAATLGY-FGPSSVLINDSGDHLKTPEDYTRVPNWVSFPTT 180
W+P A+ +G + F+I +AA++ PS+ G + + E+ + P + +P++
Sbjct: 125 WIPEIAKPIGAKTVCFNIVSAASIALSLVPSAEREVIDGKEM-SGEELAKTP--LGYPSS 181
Query: 181 -ISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLHR 239
+ R EA+ + + E+ S +++ CD +A+R+C E E ++ + + +
Sbjct: 182 KVVLRPHEAKSLSFVWRKHEAIGSFFDGKVTAMRNCDAIAIRTCRETEGKFCDYISRQYS 241
Query: 240 KPVIPVGQLPTTTGDGDSDAETDT-WRSIKEWLDEQEKGSVVYVAFGSEAKPSQ-EELTE 297
KPV G P G + D W EWL + GSVV+ AFGS+ ++ ++ E
Sbjct: 242 KPVYLTG--PVLPGSQPNQPSLDPQWA---EWLAKFNHGSVVFCAFGSQPVVNKIDQFQE 296
Query: 298 IALGLELSKLPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSV 357
+ LGLE + PF +K G + E LP+GF+ER +GRGVV+ W Q +L H SV
Sbjct: 297 LCLGLESTGFPFLVAIKPPSGVSTVEEA-LPEGFKERVQGRGVVFGGWIQQPLVLNHPSV 355
Query: 358 GGFLTHAGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNS 417
G F++H G+ S+ E+L ++++ + +Q LNA+L+ E+ V + E G+F+R S
Sbjct: 356 GCFVSHCGFGSMWESLMSDCQIVLVPQHGEQILNARLMTEEMEVAVEVEREKKGWFSRQS 415
Query: 418 VAESLRLVLVE--EKGQIYRDKAKEMKGLFGDKGRHDRYVDNF 458
+ +++ V+ E E G+ R + + + D G D Y+D F
Sbjct: 416 LENAVKSVMEEGSEIGEKVRKNHDKWRCVLTDSGFSDGYIDKF 458
|
|
| TAIR|locus:2059181 AT2G22930 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 332 (121.9 bits), Expect = 1.8e-54, Sum P(2) = 1.8e-54
Identities = 78/256 (30%), Positives = 134/256 (52%)
Query: 213 KGCDIVAVRSCMEFEPEWLKLLE-QLHRKPVIPVGQLPTTTGDGDSDAETDTWRSIKEWL 271
K CDI+A+R+C E E ++ + Q H+K ++ LP + D + +L
Sbjct: 192 KSCDIIALRTCNEIEGKFCDYISSQYHKKVLLTGPMLP------EQDTSKPLEEQLSHFL 245
Query: 272 DEQEKGSVVYVAFGSEAKPSQEELTEIALGLELSKLPFFWVLKKRLGQADTEPIELPDGF 331
SVV+ A GS+ +++ E+ LG+EL+ LPF +K G + E LP+GF
Sbjct: 246 SRFPPRSVVFCALGSQIVLEKDQFQELCLGMELTGLPFLIAVKPPRGSSTVEE-GLPEGF 304
Query: 332 EERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQGLN 391
+ER +GRGVV+ W Q IL H S+G F+ H G ++ E L +++L DQ L
Sbjct: 305 QERVKGRGVVWGGWVQQPLILDHPSIGCFVNHCGPGTIWECLMTDCQMVLLPFLGDQVLF 364
Query: 392 AKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLVEEK--GQIYRDKAKEMKGLFGDKG 449
+L+ E+ V + E G+F++ S++++++ V+ ++ G++ R ++K G G
Sbjct: 365 TRLMTEEFKVSVEVSREKTGWFSKESLSDAIKSVMDKDSDLGKLVRSNHAKLKETLGSHG 424
Query: 450 RHDRYVDNFLNYLKNH 465
YVD F+ L+ +
Sbjct: 425 LLTGYVDKFVEELQEY 440
|
|
| TAIR|locus:2010816 AT1G64920 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 338 (124.0 bits), Expect = 2.3e-54, Sum P(2) = 2.3e-54
Identities = 84/267 (31%), Positives = 143/267 (53%)
Query: 206 YRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLHRKPVIPVG-QLPTTTGDGDSDAETDTW 264
+RF L CD +++R+C E E ++ +E ++K V+ G LP D E D W
Sbjct: 185 HRFTTGLMNCDFISIRTCEEIEGKFCDYIESQYKKKVLLTGPMLPEP--DKSKPLE-DQW 241
Query: 265 RSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELSKLPFFWVLKKRLGQADTEP 324
WL +GSVV+ A GS+ + + E+ LG+EL+ LPF +K G A+T
Sbjct: 242 ---SHWLSGFGQGSVVFCALGSQTILEKNQFQELCLGIELTGLPFLVAVKPPKG-ANTIH 297
Query: 325 IELPDGFEERTRGRGVVYTSWAPQLA----ILAHDSVGGFLTHAGWSSVVEALQFGMPLI 380
LP+GFEER +GRG+V+ W Q + ILAH SVG F++H G+ S+ E+L ++
Sbjct: 298 EALPEGFEERVKGRGIVWGEWVQQPSWQPLILAHPSVGCFVSHCGFGSMWESLMSDCQIV 357
Query: 381 VLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLVEEK---GQIYRDK 437
+ DQ L +++ E+ V + + E G+F++ +++ ++ ++ ++ Q+ R+
Sbjct: 358 FIPVLNDQVLTTRVMTEELEVSVEVQREETGWFSKENLSGAIMSLMDQDSEIGNQVRRNH 417
Query: 438 AKEMKGLFGDKGRHDRYVDNFLNYLKN 464
+K +K G Y D F++ L+N
Sbjct: 418 SK-LKETLASPGLLTGYTDKFVDTLEN 443
|
|
| TAIR|locus:2137722 AT4G27560 "AT4G27560" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 327 (120.2 bits), Expect = 1.7e-52, Sum P(2) = 1.7e-52
Identities = 82/261 (31%), Positives = 140/261 (53%)
Query: 207 RFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLHRKPVIPVGQLPTTTGDGDSDAETDTWRS 266
R SL D++A+R+ E E + +E+ RK V+ G P + D E + R
Sbjct: 192 RVTTSLMNSDVIAIRTAREIEGNFCDYIEKHCRKKVLLTG--PVFP-EPDKTRELEE-RW 247
Query: 267 IKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELSKLPFFWVLKKRLGQADTEPIE 326
+K WL E SVV+ A GS+ +++ E+ LG+EL+ PF +K G + +
Sbjct: 248 VK-WLSGYEPDSVVFCALGSQVILEKDQFQELCLGMELTGSPFLVAVKPPRGSSTIQEA- 305
Query: 327 LPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYA 386
LP+GFEER +GRGVV+ W Q +L+H SVG F++H G+ S+ E+L ++++
Sbjct: 306 LPEGFEERVKGRGVVWGEWVQQPLLLSHPSVGCFVSHCGFGSMWESLLSDCQIVLVPQLG 365
Query: 387 DQGLNAKLLEEKQIVEL-IPRDEGDGFFTRNSVAESLRLVLVEEK--GQIYRDKAKEMKG 443
DQ LN +LL ++ V + + R+E G+F++ S+ +++ V+ + G + + + +
Sbjct: 366 DQVLNTRLLSDELKVSVEVAREE-TGWFSKESLFDAINSVMKRDSEIGNLVKKNHTKWRE 424
Query: 444 LFGDKGRHDRYVDNFLNYLKN 464
G YVDNF+ L++
Sbjct: 425 TLTSPGLVTGYVDNFIESLQD 445
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q940V3 | U91A1_ARATH | 2, ., 4, ., 1, ., - | 0.5650 | 0.9581 | 0.9744 | yes | no |
| Q66PF2 | URT1_FRAAN | 2, ., 4, ., 1, ., - | 0.5258 | 0.9602 | 0.9602 | N/A | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 478 | |||
| PLN02670 | 472 | PLN02670, PLN02670, transferase, transferring glyc | 0.0 | |
| PLN00414 | 446 | PLN00414, PLN00414, glycosyltransferase family pro | 1e-68 | |
| PLN02208 | 442 | PLN02208, PLN02208, glycosyltransferase family pro | 2e-60 | |
| PLN02764 | 453 | PLN02764, PLN02764, glycosyltransferase family pro | 2e-58 | |
| PLN03007 | 482 | PLN03007, PLN03007, UDP-glucosyltransferase family | 2e-56 | |
| PLN02534 | 491 | PLN02534, PLN02534, UDP-glycosyltransferase | 1e-47 | |
| PLN02992 | 481 | PLN02992, PLN02992, coniferyl-alcohol glucosyltran | 3e-45 | |
| PLN02863 | 477 | PLN02863, PLN02863, UDP-glucoronosyl/UDP-glucosyl | 2e-43 | |
| PLN02167 | 475 | PLN02167, PLN02167, UDP-glycosyltransferase family | 2e-42 | |
| PLN03015 | 470 | PLN03015, PLN03015, UDP-glucosyl transferase | 2e-42 | |
| PLN00164 | 480 | PLN00164, PLN00164, glucosyltransferase; Provision | 9e-39 | |
| PLN02410 | 451 | PLN02410, PLN02410, UDP-glucoronosyl/UDP-glucosyl | 2e-36 | |
| PLN02555 | 480 | PLN02555, PLN02555, limonoid glucosyltransferase | 3e-36 | |
| PLN03004 | 451 | PLN03004, PLN03004, UDP-glycosyltransferase | 2e-33 | |
| PLN02207 | 468 | PLN02207, PLN02207, UDP-glycosyltransferase | 2e-33 | |
| PLN02554 | 481 | PLN02554, PLN02554, UDP-glycosyltransferase family | 3e-32 | |
| PLN02448 | 459 | PLN02448, PLN02448, UDP-glycosyltransferase family | 3e-31 | |
| PLN02152 | 455 | PLN02152, PLN02152, indole-3-acetate beta-glucosyl | 4e-31 | |
| PLN02210 | 456 | PLN02210, PLN02210, UDP-glucosyl transferase | 2e-28 | |
| PLN02173 | 449 | PLN02173, PLN02173, UDP-glucosyl transferase famil | 4e-28 | |
| PLN02562 | 448 | PLN02562, PLN02562, UDP-glycosyltransferase | 4e-23 | |
| pfam00201 | 500 | pfam00201, UDPGT, UDP-glucoronosyl and UDP-glucosy | 7e-16 | |
| COG1819 | 406 | COG1819, COG1819, Glycosyl transferases, related t | 5e-14 | |
| cd03784 | 401 | cd03784, GT1_Gtf_like, This family includes the Gt | 6e-14 | |
| TIGR01426 | 392 | TIGR01426, MGT, glycosyltransferase, MGT family | 8e-09 | |
| PHA03392 | 507 | PHA03392, egt, ecdysteroid UDP-glucosyltransferase | 3e-08 | |
| TIGR01426 | 392 | TIGR01426, MGT, glycosyltransferase, MGT family | 0.001 |
| >gnl|CDD|178275 PLN02670, PLN02670, transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Score = 555 bits (1432), Expect = 0.0
Identities = 242/471 (51%), Positives = 319/471 (67%), Gaps = 3/471 (0%)
Query: 1 MADNSKLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMI 60
M L +AMFPWLA GH+IP+L L+KL+AQKGHKI FISTPRN+ RLP++P L+S I
Sbjct: 1 MKREEVLHVAMFPWLAMGHLIPFLRLSKLLAQKGHKISFISTPRNLHRLPKIPSQLSSSI 60
Query: 61 QFVKISLPHVDNLRENAEATIDLPYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAA 120
V LP V L +AE++ D+PY + + LK++FD LE P+ L++ PDW+++D+A+
Sbjct: 61 TLVSFPLPSVPGLPSSAESSTDVPYTKQQLLKKAFDLLEPPLTTFLETSKPDWIIYDYAS 120
Query: 121 YWLPARARELGIPSGFFSIFTAATLGYFGPSSVLINDSGDHLKTPEDYTRVPNWVSFPTT 180
+WLP+ A ELGI FFS+FTAATL + GP S L+ GD T ED+T VP WV F +
Sbjct: 121 HWLPSIAAELGISKAFFSLFTAATLSFIGPPSSLME-GGDLRSTAEDFTVVPPWVPFESN 179
Query: 181 ISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLHRK 240
I +R E K + DE+ S RFG ++ G D+V +RS EFEPEW LL L+RK
Sbjct: 180 IVFRYHEVTKYVEKTEEDETGPSDSVRFGFAIGGSDVVIIRSSPEFEPEWFDLLSDLYRK 239
Query: 241 PVIPVGQLPTTTGDGDSDAETDT--WRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEI 298
P+IP+G LP D + D D W IKEWLD+Q SVVYVA G+EA +EE+TE+
Sbjct: 240 PIIPIGFLPPVIEDDEEDDTIDVKGWVRIKEWLDKQRVNSVVYVALGTEASLRREEVTEL 299
Query: 299 ALGLELSKLPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVG 358
ALGLE S+ PFFWVL+ G LPDGFEER +GRG+++ W PQ+ IL+H+SVG
Sbjct: 300 ALGLEKSETPFFWVLRNEPGTTQNALEMLPDGFEERVKGRGMIHVGWVPQVKILSHESVG 359
Query: 359 GFLTHAGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSV 418
GFLTH GW+SVVE L FG LI+ +QGLN +LL K++ +PRDE DG FT +SV
Sbjct: 360 GFLTHCGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLEVPRDERDGSFTSDSV 419
Query: 419 AESLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLKNHRCLR 469
AES+RL +V++ G+ RDKAKEM+ LFGD R++RYVD ++YL+ +R R
Sbjct: 420 AESVRLAMVDDAGEEIRDKAKEMRNLFGDMDRNNRYVDELVHYLRENRSSR 470
|
Length = 472 |
| >gnl|CDD|177807 PLN00414, PLN00414, glycosyltransferase family protein | Back alignment and domain information |
|---|
Score = 225 bits (575), Expect = 1e-68
Identities = 146/467 (31%), Positives = 229/467 (49%), Gaps = 34/467 (7%)
Query: 5 SKLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNL-ASMIQFV 63
SK M+PW FGHMIP+L LA +A+KGH++ F + +L P NL I F
Sbjct: 3 SKFHAFMYPWFGFGHMIPYLHLANKLAEKGHRVTFFLPKKAHKQLQ--PLNLFPDSIVFE 60
Query: 64 KISLPHVDNLRENAEATIDLPYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAAYWL 123
++LP VD L AE DLP K + + D L + + +++L PD + FDF +W+
Sbjct: 61 PLTLPPVDGLPFGAETASDLPNSTKKPIFDAMDLLRDQIEAKVRALKPDLIFFDFV-HWV 119
Query: 124 PARARELGIPSGFFSIFTAATLG-YFGPSSVLINDSGDHLKTPEDYTRVPNWVSFPTTIS 182
P A+E GI S + I +AA + P + L P DY +
Sbjct: 120 PEMAKEFGIKSVNYQIISAACVAMVLAPRAELGF-------PPPDYPLSKVALRGHDANV 172
Query: 183 YRLF-EARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLHRKP 241
LF + ++F + LK CD+V++R+C+E E +E+ ++
Sbjct: 173 CSLFANSHELFG-------------LITKGLKNCDVVSIRTCVELEGNLCDFIERQCQRK 219
Query: 242 VIPVG-QLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIAL 300
V+ G LP E D W WL+ E GSVV+ AFG++ +++ E L
Sbjct: 220 VLLTGPMLPEPQNKSGKPLE-DRW---NHWLNGFEPGSVVFCAFGTQFFFEKDQFQEFCL 275
Query: 301 GLELSKLPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGF 360
G+EL+ LPF + G + + LP+GFEER +GRG+V+ W Q IL+H SVG F
Sbjct: 276 GMELTGLPFLIAVMPPKGSSTVQE-ALPEGFEERVKGRGIVWEGWVEQPLILSHPSVGCF 334
Query: 361 LTHAGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAE 420
+ H G+ S+ E+L ++ + ADQ L +LL E+ V + + E G+F++ S+ +
Sbjct: 335 VNHCGFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQREDSGWFSKESLRD 394
Query: 421 SLRLVL--VEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLKNH 465
+++ V+ E G + + K++K G Y D F+ L+N
Sbjct: 395 TVKSVMDKDSEIGNLVKRNHKKLKETLVSPGLLSGYADKFVEALENE 441
|
Length = 446 |
| >gnl|CDD|177858 PLN02208, PLN02208, glycosyltransferase family protein | Back alignment and domain information |
|---|
Score = 204 bits (519), Expect = 2e-60
Identities = 135/468 (28%), Positives = 231/468 (49%), Gaps = 39/468 (8%)
Query: 6 KLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKI 65
K MFPW AFGHMIP+L LA +A+KGH++ F+ P+ + I F +
Sbjct: 4 KFHAFMFPWFAFGHMIPFLHLANKLAEKGHRVTFL-LPKKAQKQLEHHNLFPDSIVFHPL 62
Query: 66 SLPHVDNLRENAEATIDLPYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAAYWLPA 125
++P V+ L AE T D+P L ++ D + + +++L PD + FDFA W+P
Sbjct: 63 TIPPVNGLPAGAETTSDIPISMDNLLSEALDLTRDQVEAAVRALRPDLIFFDFA-QWIPE 121
Query: 126 RARELGIPSGFFSIFTAATLGY-FGPSSVLINDSGDHLKTPEDYTRVPNWVSFPTTISYR 184
A+E I S + I +A T+ + P L P + S + + +R
Sbjct: 122 MAKEHMIKSVSYIIVSATTIAHTHVPGGKL-------------GVPPPGYPS--SKVLFR 166
Query: 185 LFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLL-EQLHRKPVI 243
+A + + I + H G LK CD++A+R+C E E ++ + Q H+K ++
Sbjct: 167 ENDAHALATLSIF-YKRLYHQITTG--LKSCDVIALRTCKEIEGKFCDYISRQYHKKVLL 223
Query: 244 PVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKG----SVVYVAFGSEAKPSQEELTEIA 299
P E DT + ++E G SVV+ + GS+ +++ E+
Sbjct: 224 TGPMFP----------EPDTSKPLEEQWSHFLSGFPPKSVVFCSLGSQIILEKDQFQELC 273
Query: 300 LGLELSKLPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGG 359
LG+EL+ LPF +K G + + LP+GFEER +GRGVV+ W Q IL H S+G
Sbjct: 274 LGMELTGLPFLIAVKPPRGSSTVQE-GLPEGFEERVKGRGVVWGGWVQQPLILDHPSIGC 332
Query: 360 FLTHAGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVA 419
F+ H G ++ E+L ++++ +DQ L +L+ E+ V + E G+F++ S++
Sbjct: 333 FVNHCGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREKTGWFSKESLS 392
Query: 420 ESLRLVLVEEK--GQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLKNH 465
+++ V+ ++ G++ R ++K + G YVD F+ L+ +
Sbjct: 393 NAIKSVMDKDSDLGKLVRSNHTKLKEILVSPGLLTGYVDKFVEELQEY 440
|
Length = 442 |
| >gnl|CDD|178364 PLN02764, PLN02764, glycosyltransferase family protein | Back alignment and domain information |
|---|
Score = 199 bits (506), Expect = 2e-58
Identities = 137/470 (29%), Positives = 238/470 (50%), Gaps = 40/470 (8%)
Query: 6 KLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRL---PQNLASMIQF 62
K + M+PW A GHM P+L LA +A+KGH + F+ + + +L L P N I F
Sbjct: 5 KFHVLMYPWFATGHMTPFLFLANKLAEKGHTVTFLLPKKALKQLEHLNLFPHN----IVF 60
Query: 63 VKISLPHVDNLRENAEATIDLPYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAAYW 122
+++PHVD L E ++P L + D + + +++++ PD + FDFA +W
Sbjct: 61 RSVTVPHVDGLPVGTETVSEIPVTSADLLMSAMDLTRDQVEVVVRAVEPDLIFFDFA-HW 119
Query: 123 LPARARELGIPSGFFSIFTAATLGYFGPSSVLINDSGDHLKTPEDYTRVPNWVSFPTTIS 182
+P AR+ G+ + + + +A+T+ +S+L+ G L P P + S + +
Sbjct: 120 IPEVARDFGLKTVKYVVVSASTI-----ASMLV--PGGELGVPP-----PGYPS--SKVL 165
Query: 183 YRLFEARKVFDILISDESNVSHGY--RFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLHRK 240
R +A + ++ ++ +V R SL D++A+R+ E E + +E+ RK
Sbjct: 166 LRKQDAYTMKNLEPTNTIDVGPNLLERVTTSLMNSDVIAIRTAREIEGNFCDYIEKHCRK 225
Query: 241 PVIPVGQLPTTTGDGDSDAETDTWRSIKE----WLDEQEKGSVVYVAFGSEAKPSQEELT 296
V+ G + E D R ++E WL E SVV+ A GS+ +++
Sbjct: 226 KVLLTGPV---------FPEPDKTRELEERWVKWLSGYEPDSVVFCALGSQVILEKDQFQ 276
Query: 297 EIALGLELSKLPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDS 356
E+ LG+EL+ PF +K G + + LP+GFEER +GRGVV+ W Q IL+H S
Sbjct: 277 ELCLGMELTGSPFLVAVKPPRGSSTIQE-ALPEGFEERVKGRGVVWGGWVQQPLILSHPS 335
Query: 357 VGGFLTHAGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRN 416
VG F++H G+ S+ E+L ++++ DQ LN +LL ++ V + E G+F++
Sbjct: 336 VGCFVSHCGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREETGWFSKE 395
Query: 417 SVAESLRLVLVE--EKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLKN 464
S+ +++ V+ E G + + + + G YVDNF+ L++
Sbjct: 396 SLRDAINSVMKRDSEIGNLVKKNHTKWRETLASPGLLTGYVDNFIESLQD 445
|
Length = 453 |
| >gnl|CDD|178584 PLN03007, PLN03007, UDP-glucosyltransferase family protein | Back alignment and domain information |
|---|
Score = 194 bits (494), Expect = 2e-56
Identities = 145/508 (28%), Positives = 234/508 (46%), Gaps = 83/508 (16%)
Query: 5 SKLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRN-------IDRLPRLPQNLA 57
KL I FP++A GHMIP L++AKL + +G K ++TP N I+ L L
Sbjct: 4 EKLHILFFPFMAHGHMIPTLDMAKLFSSRGAKSTILTTPLNAKIFEKPIEAFKNLNPGLE 63
Query: 58 SMIQF-----VKISLPHVDNLRENAEATIDLPYDEVKYLKQSF----DCLEEPMAKLLQS 108
IQ V++ LP EN + D+ L F ++ + KLL++
Sbjct: 64 IDIQIFNFPCVELGLP---EGCENVDFITSNNNDDSGDLFLKFLFSTKYFKDQLEKLLET 120
Query: 109 LAPDWLLFDFAAYWLPARARELGIP------SGFFSIFTAATLGYFGPSSVLINDSGDHL 162
PD L+ D W A + G+P +G+FS+ + + P + + S
Sbjct: 121 TRPDCLVADMFFPWATEAAEKFGVPRLVFHGTGYFSLCASYCIRVHKPQKKVASSS---- 176
Query: 163 KTPEDYTRVPNWVSFPTTISYRLFEARKVFDILISDES-NVSHGY----RFGQSLKGCDI 217
P +P DI+I++E N + +F + ++ ++
Sbjct: 177 -EPFVIPDLPG-------------------DIVITEEQINDADEESPMGKFMKEVRESEV 216
Query: 218 ----VAVRSCMEFEPEWLKLLEQLHRKPVIPVGQLPTTTGDGDSDAETDTWRSIKE---- 269
V V S E E + + K +G L + AE +I E
Sbjct: 217 KSFGVLVNSFYELESAYADFYKSFVAKRAWHIGPLSLYNRGFEEKAERGKKANIDEQECL 276
Query: 270 -WLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELSKLPFFWVLKKRLGQADTEPIELP 328
WLD ++ SV+Y++FGS A E+L EIA GLE S F WV++K Q + E LP
Sbjct: 277 KWLDSKKPDSVIYLSFGSVASFKNEQLFEIAAGLEGSGQNFIWVVRKNENQGEKEEW-LP 335
Query: 329 DGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQ 388
+GFEERT+G+G++ WAPQ+ IL H + GGF+TH GW+S++E + G+P++ A+Q
Sbjct: 336 EGFEERTKGKGLIIRGWAPQVLILDHQATGGFVTHCGWNSLLEGVAAGLPMVTWPVGAEQ 395
Query: 389 GLNAKLLEE----------KQIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKA 438
N KL+ + K++V++ GD F +R V +++R V+V E+ + R +A
Sbjct: 396 FYNEKLVTQVLRTGVSVGAKKLVKVK----GD-FISREKVEKAVREVIVGEEAEERRLRA 450
Query: 439 KEM----KGLFGDKGRHDRYVDNFLNYL 462
K++ K + G ++ F+ L
Sbjct: 451 KKLAEMAKAAVEEGGSSFNDLNKFMEEL 478
|
Length = 482 |
| >gnl|CDD|215293 PLN02534, PLN02534, UDP-glycosyltransferase | Back alignment and domain information |
|---|
Score = 170 bits (433), Expect = 1e-47
Identities = 124/408 (30%), Positives = 187/408 (45%), Gaps = 26/408 (6%)
Query: 5 SKLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASM---IQ 61
+L + P +A GHMIP +++A+L+A++G + ++TP+N R + I+
Sbjct: 7 KQLHFVLIPLMAQGHMIPMIDMARLLAERGVIVSLVTTPQNASRFAKTIDRARESGLPIR 66
Query: 62 FVKISLPHVD-NLRENAEATIDLPY-DEVKYLKQSFDCLEEPMAKLL--QSLAPDWLLFD 117
V+I P + L E LP D ++ + D L++P+ + L P ++ D
Sbjct: 67 LVQIPFPCKEVGLPIGCENLDTLPSRDLLRKFYDAVDKLQQPLERFLEQAKPPPSCIISD 126
Query: 118 FAAYWLPARARELGIPSGFFSIFTAATLGYFGPSSVLINDSGDHLKTPEDYTR--VPNWV 175
W A+ IP F +L SS I HL D VP
Sbjct: 127 KCLSWTSKTAQRFNIPRIVFHGMCCFSL----LSSHNIRLHNAHLSVSSDSEPFVVPG-- 180
Query: 176 SFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLK-GCDIVAVRSCMEFEPEWLKLL 234
P +I + F L D +V + R +S G V V S E E +
Sbjct: 181 -MPQSIEITRAQLPGAFVSL-PDLDDVRNKMREAESTAFG---VVVNSFNELEHGCAEAY 235
Query: 235 EQLHRKPVIPVGQLPTTTGDGDSDAETDTWRSIKE-----WLDEQEKGSVVYVAFGSEAK 289
E+ +K V VG + E SI E WLD + SV+Y GS +
Sbjct: 236 EKAIKKKVWCVGPVSLCNKRNLDKFERGNKASIDETQCLEWLDSMKPRSVIYACLGSLCR 295
Query: 290 PSQEELTEIALGLELSKLPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQL 349
+L E+ LGLE SK PF WV+K ++ E + + FEER +GRG++ WAPQ+
Sbjct: 296 LVPSQLIELGLGLEASKKPFIWVIKTGEKHSELEEWLVKENFEERIKGRGLLIKGWAPQV 355
Query: 350 AILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEE 397
IL+H ++GGFLTH GW+S +E + G+P+I +A+Q LN KL+ E
Sbjct: 356 LILSHPAIGGFLTHCGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVE 403
|
Length = 491 |
| >gnl|CDD|178572 PLN02992, PLN02992, coniferyl-alcohol glucosyltransferase | Back alignment and domain information |
|---|
Score = 164 bits (416), Expect = 3e-45
Identities = 134/463 (28%), Positives = 213/463 (46%), Gaps = 50/463 (10%)
Query: 5 SKLQIAMFPWLAFGHMIPWLELAK-LIAQKGH--KIFFISTPRNIDRLPRLPQNLASM-I 60
+K AMF GH+IP +EL K L A G +F + T D + L S +
Sbjct: 4 TKPHAAMFSSPGMGHVIPVIELGKRLSANHGFHVTVFVLET----DAASAQSKFLNSTGV 59
Query: 61 QFVKISLPHVDNLRE-NAEATIDLPYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFA 119
V + P + L + +A + ++++ L +A++ Q P L+ D
Sbjct: 60 DIVGLPSPDISGLVDPSAHVVTKIGV----IMREAVPTLRSKIAEMHQK--PTALIVDLF 113
Query: 120 AYWLPARARELGIPSGFFSIFTAATLGYFGPSSVLINDSGDHLKTPEDYTRVPNWVSFPT 179
E + + IF A+ + G S D E++T ++ P
Sbjct: 114 GTDALCLGGEFNMLT---YIFIASNARFLGVSIYYPTLDKD---IKEEHTVQRKPLAMPG 167
Query: 180 TISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLK------L 233
R + + L+ DE R G + D + V + E EP+ LK L
Sbjct: 168 CEPVRFEDTLDAY--LVPDEPVYRDFVRHGLAYPKADGILVNTWEEMEPKSLKSLQDPKL 225
Query: 234 LEQLHRKPVIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQE 293
L ++ R PV P+G L +D + +WL++Q SV+Y++FGS S +
Sbjct: 226 LGRVARVPVYPIGPLCRPIQSSKTD------HPVLDWLNKQPNESVLYISFGSGGSLSAK 279
Query: 294 ELTEIALGLELSKLPFFWVLKKRL--------------GQADTEPIELPDGFEERTRGRG 339
+LTE+A GLE+S+ F WV++ + D P LP+GF RT RG
Sbjct: 280 QLTELAWGLEMSQQRFVWVVRPPVDGSACSAYFSANGGETRDNTPEYLPEGFVSRTHDRG 339
Query: 340 VVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQ 399
V SWAPQ ILAH +VGGFLTH GWSS +E++ G+P+I +A+Q +NA LL ++
Sbjct: 340 FVVPSWAPQAEILAHQAVGGFLTHCGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDEL 399
Query: 400 IVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMK 442
+ + D+ +R+ + +R V+VEE+G+ R K K+++
Sbjct: 400 GIA-VRSDDPKEVISRSKIEALVRKVMVEEEGEEMRRKVKKLR 441
|
Length = 481 |
| >gnl|CDD|215465 PLN02863, PLN02863, UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Score = 159 bits (403), Expect = 2e-43
Identities = 137/487 (28%), Positives = 228/487 (46%), Gaps = 46/487 (9%)
Query: 1 MADNSKLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRL-PRLPQNLASM 59
+ + + +FP+ A GHMIP L+L +A +G I + TP+N+ L P L ++
Sbjct: 4 LNKPAGTHVLVFPFPAQGHMIPLLDLTHRLALRGLTITVLVTPKNLPFLNPLLSKH--PS 61
Query: 60 IQFVKISLPHVDNLRENAEATIDLPYDEVKYLKQSFDCLEEPMAKLLQS--LAPDWLLFD 117
I+ + + P ++ E DLP + + L P+ +S P ++ D
Sbjct: 62 IETLVLPFPSHPSIPSGVENVKDLPPSGFPLMIHALGELYAPLLSWFRSHPSPPVAIISD 121
Query: 118 FAAYWLPARARELGI------PSGFFSIFTAATLGYFGPSSVLINDSGDHLKTPEDYTRV 171
W A +LGI PSG ++ +L P+ + +D + L ++++
Sbjct: 122 MFLGWTQNLACQLGIRRFVFSPSGAMALSIMYSLWREMPTKINPDDQNEILS----FSKI 177
Query: 172 PNWVSFP-TTIS--YRLFEARKVFDILISD--ESNV-SHGYRFGQSLKGCDIVAVRSCME 225
PN +P IS YR + I D +N+ S G + V S E
Sbjct: 178 PNCPKYPWWQISSLYRSYVEGDPAWEFIKDSFRANIASWG------------LVVNSFTE 225
Query: 226 FEPEWLKLL-EQLHRKPVIPVGQLPTTTGDGDSDAETDTWRS-----IKEWLDEQEKGSV 279
E +L+ L ++L V VG + +G+ E S + WLD E V
Sbjct: 226 LEGIYLEHLKKELGHDRVWAVGPILPLSGEKSGLMERGGPSSVSVDDVMTWLDTCEDHKV 285
Query: 280 VYVAFGSEAKPSQEELTEIALGLELSKLPFFWVLKKRLGQADTEPIELPDGFEERTRGRG 339
VYV FGS+ ++E++ +A GLE S + F W +K+ + + +P GFE+R GRG
Sbjct: 286 VYVCFGSQVVLTKEQMEALASGLEKSGVHFIWCVKEPVNEESDYSN-IPSGFEDRVAGRG 344
Query: 340 VVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQ 399
+V WAPQ+AIL+H +VG FLTH GW+SV+E L G+P++ ADQ +NA LL ++
Sbjct: 345 LVIRGWAPQVAILSHRAVGAFLTHCGWNSVLEGLVAGVPMLAWPMAADQFVNASLLVDEL 404
Query: 400 IVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMK----GLFGDKGRHDRYV 455
V + + D + +A + E Q+ R++AKE++ ++G + +
Sbjct: 405 KVAVRVCEGADTVPDSDELARVFMESVSEN--QVERERAKELRRAALDAIKERGSSVKDL 462
Query: 456 DNFLNYL 462
D F+ ++
Sbjct: 463 DGFVKHV 469
|
Length = 477 |
| >gnl|CDD|215112 PLN02167, PLN02167, UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Score = 156 bits (397), Expect = 2e-42
Identities = 132/494 (26%), Positives = 215/494 (43%), Gaps = 67/494 (13%)
Query: 8 QIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVK--- 64
++ P+ + GH++ +E AK + +I I T LP PQ A + +
Sbjct: 5 ELIFVPFPSTGHILVTIEFAKRLINLDRRIHTI-TILYWS-LPFAPQADAFLKSLIASEP 62
Query: 65 ----ISLPHVDN------LRENAEATIDLPYDEVKYLKQSFDCLEEPMAKLLQSLAPD-- 112
++LP V + + +EA I ++++K+ + + ++ L+ S
Sbjct: 63 RIRLVTLPEVQDPPPMELFVKASEAYI------LEFVKKMVPLVRDALSTLVSSRDESDS 116
Query: 113 ----WLLFDFAAYWLPARARELGIPSGFFSIFTAATLGYFGPSSVLINDSGDHLKTPEDY 168
L+ DF L E +PS IF G+ G L H KT ++
Sbjct: 117 VRVAGLVLDFFCVPLIDVGNEFNLPS---YIFLTCNAGFLGMMKYLPER---HRKTASEF 170
Query: 169 TR--------VPNWV-SFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVA 219
+P +V S PT +F S E+ V RF ++ KG +
Sbjct: 171 DLSSGEEELPIPGFVNSVPTK-----VLPPGLFMKE-SYEAWVEIAERFPEA-KG---IL 220
Query: 220 VRSCMEFEPEWLKLLEQLHRK--PVIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKG 277
V S E EP +L PV PVG + + + ++ I WLD+Q +
Sbjct: 221 VNSFTELEPNAFDYFSRLPENYPPVYPVGPILSLKDRTSPNLDSSDRDRIMRWLDDQPES 280
Query: 278 SVVYVAFGSEAKPSQEELTEIALGLELSKLPFFWVLKKRLGQADTEPIE-LPDGFEERTR 336
SVV++ FGS ++ EIA LEL F W ++ P E LP+GF +R
Sbjct: 281 SVVFLCFGSLGSLPAPQIKEIAQALELVGCRFLWSIRTN-PAEYASPYEPLPEGFMDRVM 339
Query: 337 GRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQGLNA-KLL 395
GRG+V WAPQ+ ILAH ++GGF++H GW+SV+E+L FG+P+ YA+Q LNA ++
Sbjct: 340 GRGLV-CGWAPQVEILAHKAIGGFVSHCGWNSVLESLWFGVPIATWPMYAEQQLNAFTMV 398
Query: 396 EEKQIVELIPRD---EGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEM----KGLFGDK 448
+E + + D + +A ++R ++ + + R K KE+ + D
Sbjct: 399 KELGLAVELRLDYVSAYGEIVKADEIAGAVRSLM--DGEDVPRKKVKEIAEAARKAVMDG 456
Query: 449 GRHDRYVDNFLNYL 462
G V F++ L
Sbjct: 457 GSSFVAVKRFIDDL 470
|
Length = 475 |
| >gnl|CDD|178589 PLN03015, PLN03015, UDP-glucosyl transferase | Back alignment and domain information |
|---|
Score = 156 bits (396), Expect = 2e-42
Identities = 97/246 (39%), Positives = 143/246 (58%), Gaps = 30/246 (12%)
Query: 210 QSLKGCDIVAVRSCMEFEPEWLKLLEQLHRKPVIPVGQLPTTTGDGDSDAETDTWRSIKE 269
+ L+G + A+R ME L ++ + PV P+G + T + SI E
Sbjct: 214 EELQGNTLAALREDME--------LNRVMKVPVYPIGPIVRTNV------HVEKRNSIFE 259
Query: 270 WLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELSKLPFFWVLKK---RLG--QADTEP 324
WLD+Q + SVVYV GS + E+ E+A GLELS F WVL++ LG +D +
Sbjct: 260 WLDKQGERSVVYVCLGSGGTLTFEQTVELAWGLELSGQRFVWVLRRPASYLGASSSDDDQ 319
Query: 325 IE--LPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVL 382
+ LP+GF +RTRG G+V T WAPQ+ IL+H S+GGFL+H GWSSV+E+L G+P++
Sbjct: 320 VSASLPEGFLDRTRGVGLVVTQWAPQVEILSHRSIGGFLSHCGWSSVLESLTKGVPIVAW 379
Query: 383 TCYADQGLNAKLLEEKQIVEL----IPRDEGDGFFTRNSVAESLRLVLVEE--KGQIYRD 436
YA+Q +NA LL E+ V + +P ++ G R VA +R ++ EE +GQ R
Sbjct: 380 PLYAEQWMNATLLTEEIGVAVRTSELPSEKVIG---REEVASLVRKIVAEEDEEGQKIRA 436
Query: 437 KAKEMK 442
KA+E++
Sbjct: 437 KAEEVR 442
|
Length = 470 |
| >gnl|CDD|215084 PLN00164, PLN00164, glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 146 bits (370), Expect = 9e-39
Identities = 112/356 (31%), Positives = 159/356 (44%), Gaps = 49/356 (13%)
Query: 114 LLFDFAAYWLPARARELGIPSGFFSIFTAATLGYFGPSSVLINDSGDHLKTPEDYTRVPN 173
L+ DF L AREL +P+ + TAA L L + + E VP
Sbjct: 114 LVVDFFCTPLLDVARELAVPAYVYFTSTAAMLALMLRLPALDEEVAVEFEEMEGAVDVPG 173
Query: 174 W-----VSFPTTI------SYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRS 222
S P + +Y F V HG RF ++ + V +
Sbjct: 174 LPPVPASSLPAPVMDKKSPNYAWF---------------VYHGRRFMEA----AGIIVNT 214
Query: 223 CMEFEPEWL------KLLEQLHRKPVIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEK 276
E EP L + V P+G P + AE ++ WLD Q
Sbjct: 215 AAELEPGVLAAIADGRCTPGRPAPTVYPIG--PVISLAFTPPAEQPPHECVR-WLDAQPP 271
Query: 277 GSVVYVAFGSEAKPSQEELTEIALGLELSKLPFFWVLKKRLGQADTEPIE------LPDG 330
SVV++ FGS ++ EIA GLE S F WVL+ P + LP+G
Sbjct: 272 ASVVFLCFGSMGFFDAPQVREIAAGLERSGHRFLWVLRGPPAAGSRHPTDADLDELLPEG 331
Query: 331 FEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQGL 390
F ERT+GRG+V+ +WAPQ ILAH +VGGF+TH GW+SV+E+L G+P+ YA+Q L
Sbjct: 332 FLERTKGRGLVWPTWAPQKEILAHAAVGGFVTHCGWNSVLESLWHGVPMAPWPLYAEQHL 391
Query: 391 NAKLL--EEKQIVELIPRDEGDGFFTRNSVAESLRLVL--VEEKGQIYRDKAKEMK 442
NA L + V + + D F + ++R ++ EE+G+ R+KA EMK
Sbjct: 392 NAFELVADMGVAVAMKVDRKRDNFVEAAELERAVRSLMGGGEEEGRKAREKAAEMK 447
|
Length = 480 |
| >gnl|CDD|178032 PLN02410, PLN02410, UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Score = 139 bits (352), Expect = 2e-36
Identities = 127/443 (28%), Positives = 206/443 (46%), Gaps = 35/443 (7%)
Query: 8 QIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKI-- 65
++ + P A GH+ P ++LAK + KG I T N P + + QFV I
Sbjct: 9 RVVLVPVPAQGHISPMMQLAKTLHLKGFSITIAQTKFNYFS----PSDDFTDFQFVTIPE 64
Query: 66 SLPHVD--NLRENAEATIDLPYDEVKYLKQSF-DCLEEPMAKLLQSLAPDWLLFDFAAYW 122
SLP D NL I+ + K + SF DCL + + L Q +++D Y+
Sbjct: 65 SLPESDFKNL-----GPIEFLHKLNKECQVSFKDCLGQLV--LQQGNEIACVVYDEFMYF 117
Query: 123 LPARARELGIPSGFFSIFTAATLGYFGPSSVLINDSGDHLKTPEDYTRVPNWVSFPTTIS 182
A A+E +P+ FS +A F SV +++ P + P
Sbjct: 118 AEAAAKEFKLPNVIFSTTSATA---FVCRSVFDKLYANNVLAPLKEPKGQQNELVPE--- 171
Query: 183 YRLFEARKVFDILISDESNVS---HGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLHR 239
F + D +S +++ YR + V + + E L L+Q +
Sbjct: 172 ---FHPLRCKDFPVSHWASLESIMELYRNTVDKRTASSVIINTASCLESSSLSRLQQQLQ 228
Query: 240 KPVIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIA 299
PV P+G L S E + +S EWL++Q+K SV++V+ GS A E+ E A
Sbjct: 229 IPVYPIGPLHLVASAPTSLLEEN--KSCIEWLNKQKKNSVIFVSLGSLALMEINEVMETA 286
Query: 300 LGLELSKLPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGG 359
GL+ S F WV++ + LP F + GRG + WAPQ +L+H +VGG
Sbjct: 287 SGLDSSNQQFLWVIRPGSVRGSEWIESLPKEFSKIISGRGYI-VKWAPQKEVLSHPAVGG 345
Query: 360 FLTHAGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVA 419
F +H GW+S +E++ G+P+I +DQ +NA+ LE + ++ + EGD R +V
Sbjct: 346 FWSHCGWNSTLESIGEGVPMICKPFSSDQKVNARYLE--CVWKIGIQVEGD--LDRGAVE 401
Query: 420 ESLRLVLVEEKGQIYRDKAKEMK 442
+++ ++VEE+G+ R +A +K
Sbjct: 402 RAVKRLMVEEEGEEMRKRAISLK 424
|
Length = 451 |
| >gnl|CDD|178170 PLN02555, PLN02555, limonoid glucosyltransferase | Back alignment and domain information |
|---|
Score = 139 bits (352), Expect = 3e-36
Identities = 82/261 (31%), Positives = 120/261 (45%), Gaps = 38/261 (14%)
Query: 225 EFEPEWLKLLEQLHRKPVIPVGQLPTTTGDGDSDAETDTWRSIK---EWLDEQEKGSVVY 281
E E E + + +L P+ PVG L +SD + D + EWLD + SVVY
Sbjct: 224 ELEKEIIDYMSKLC--PIKPVGPLFKMAKTPNSDVKGDISKPADDCIEWLDSKPPSSVVY 281
Query: 282 VAFGSEAKPSQEELTEIALGLELSKLPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVV 341
++FG+ QE++ EIA G+ S + F WV++ + EP LP+ F E+ +G +
Sbjct: 282 ISFGTVVYLKQEQIDEIAYGVLNSGVSFLWVMRPPHKDSGVEPHVLPEEFLEKAGDKGKI 341
Query: 342 YTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQGLNAKLL------ 395
W PQ +LAH SV F+TH GW+S +EAL G+P++ + DQ +A L
Sbjct: 342 -VQWCPQEKVLAHPSVACFVTHCGWNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKT 400
Query: 396 ---------EEKQIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKA----KEMK 442
E K LI R+E VAE L V EK + A +E +
Sbjct: 401 GVRLCRGEAENK----LITREE---------VAECLLEATVGEKAAELKQNALKWKEEAE 447
Query: 443 GLFGDKGRHDRYVDNFLNYLK 463
+ G DR F++ L
Sbjct: 448 AAVAEGGSSDRNFQEFVDKLV 468
|
Length = 480 |
| >gnl|CDD|178581 PLN03004, PLN03004, UDP-glycosyltransferase | Back alignment and domain information |
|---|
Score = 131 bits (330), Expect = 2e-33
Identities = 121/461 (26%), Positives = 204/461 (44%), Gaps = 58/461 (12%)
Query: 9 IAMFPWLAFGHMIPWLELAKLIAQKGHK--IFFISTPRNIDRLPRLPQNLASMIQFVKIS 66
I ++P GH++ +EL K I K I I P P P++ A+ I V S
Sbjct: 6 IVLYPAPPIGHLVSMVELGKTILSKNPSLSIHIILVPP-----PYQPESTATYISSVSSS 60
Query: 67 LP-----HVDNLRENAEATIDLPYDEVKYLKQSFDCLEEP-MAKLLQSLAPDW----LLF 116
P H+ + + ++ + E L+ C P + + L SL+ ++ ++
Sbjct: 61 FPSITFHHLPAVTPYSSSSTSRHHHESLLLE--ILCFSNPSVHRTLFSLSRNFNVRAMII 118
Query: 117 DFAAYWLPARARELGIPSGFFSIFTAATLGY-FGPSSVLINDSGDHLKT----------P 165
DF + + P FF AA L + F ++ G +LK P
Sbjct: 119 DFFCTAVLDITADFTFPVYFFYTSGAACLAFSFYLPTIDETTPGKNLKDIPTVHIPGVPP 178
Query: 166 EDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCME 225
+ +P V L +V+D+ I FG+ L + + +
Sbjct: 179 MKGSDMPKAV---------LERDDEVYDVFI----------MFGKQLSKSSGIIINTFDA 219
Query: 226 FEPEWLK-LLEQLHRKPVIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAF 284
E +K + E+L + + P+G P D + S WLD Q + SVV++ F
Sbjct: 220 LENRAIKAITEELCFRNIYPIG--PLIVNGRIEDRNDNKAVSCLNWLDSQPEKSVVFLCF 277
Query: 285 GSEAKPSQEELTEIALGLELSKLPFFWVLKKRLGQADTE---PIELPDGFEERTRGRGVV 341
GS S+E++ EIA+GLE S F WV++ TE LP+GF RT +G+V
Sbjct: 278 GSLGLFSKEQVIEIAVGLEKSGQRFLWVVRNPPELEKTELDLKSLLPEGFLSRTEDKGMV 337
Query: 342 YTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIV 401
SWAPQ+ +L H +VGGF+TH GW+S++EA+ G+P++ YA+Q N ++ ++ +
Sbjct: 338 VKSWAPQVPVLNHKAVGGFVTHCGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKI 397
Query: 402 ELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMK 442
+ + GF + V + ++ ++ E R++ MK
Sbjct: 398 AISMNESETGFVSSTEVEKRVQEIIGECP---VRERTMAMK 435
|
Length = 451 |
| >gnl|CDD|177857 PLN02207, PLN02207, UDP-glycosyltransferase | Back alignment and domain information |
|---|
Score = 131 bits (330), Expect = 2e-33
Identities = 117/446 (26%), Positives = 204/446 (45%), Gaps = 53/446 (11%)
Query: 8 QIAMFPWLAFGHMIPWLELAKLIAQKGHKI---FFISTPRNIDRLPRLPQNLASMIQFVK 64
++ P GH++P+LE A+ + ++ +I + + L +++AS FV+
Sbjct: 5 ELIFIPTPTVGHLVPFLEFARRLIEQDDRIRITILLMKLQGQSHLDTYVKSIASSQPFVR 64
Query: 65 -ISLPHVDN-----LRENAEATIDLPYDEVKYLKQSFDCLEEPMAKLLQSLAPDW----- 113
I +P ++ ++ EA + YD ++++ + + +L SLA D
Sbjct: 65 FIDVPELEEKPTLGGTQSVEAYV---YD---VIEKNIPLVRNIVMDILSSLALDGVKVKG 118
Query: 114 LLFDFAAYWLPARARELGIP--------SGFFSIFTAATLGYFGPSSVLINDSGDHLKTP 165
+ DF + A+++ +P SGF ++ + +SV + +S + L P
Sbjct: 119 FVADFFCLPMIDVAKDVSLPFYVFLTTNSGFLAMMQYLADRHSKDTSVFVRNSEEMLSIP 178
Query: 166 EDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCME 225
VP V ++A IL + + + V S +
Sbjct: 179 GFVNPVPANVLPSALFVEDGYDAYVKLAILFTKANGI----------------LVNSSFD 222
Query: 226 FEPEWLK-LLEQLHRKPVIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAF 284
EP + L++ + V VG + + + + +WLD+Q + SVV++ F
Sbjct: 223 IEPYSVNHFLDEQNYPSVYAVGPIFDLKAQPHPEQDLARRDELMKWLDDQPEASVVFLCF 282
Query: 285 GSEAKPSQEELTEIALGLELSKLPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTS 344
GS + + EIA GLEL + F W L+ + T LP+GF +R GRG++
Sbjct: 283 GSMGRLRGPLVKEIAHGLELCQYRFLWSLRT---EEVTNDDLLPEGFLDRVSGRGMI-CG 338
Query: 345 WAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQGLNAKLL--EEKQIVE 402
W+PQ+ ILAH +VGGF++H GW+S+VE+L FG+P++ YA+Q LNA L+ E K VE
Sbjct: 339 WSPQVEILAHKAVGGFVSHCGWNSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVE 398
Query: 403 LIP--RDEGDGFFTRNSVAESLRLVL 426
L R D N + ++R V+
Sbjct: 399 LKLDYRVHSDEIVNANEIETAIRCVM 424
|
Length = 468 |
| >gnl|CDD|215304 PLN02554, PLN02554, UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Score = 128 bits (323), Expect = 3e-32
Identities = 90/262 (34%), Positives = 129/262 (49%), Gaps = 32/262 (12%)
Query: 202 VSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLHRK--PVIPVGQLPTTTGDGDSDA 259
++ RF + +KG + V + E EP+ LK PV PVG P + D
Sbjct: 202 LAQARRF-REMKG---ILVNTVAELEPQALKFFSGSSGDLPPVYPVG--PVLHLENSGDD 255
Query: 260 ETDTWRS-IKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELSKLPFFWVLKKRLG 318
D +S I WLDEQ SVV++ FGS S+E+ EIA+ LE S F W L++
Sbjct: 256 SKDEKQSEILRWLDEQPPKSVVFLCFGSMGGFSEEQAREIAIALERSGHRFLWSLRRASP 315
Query: 319 QADTEPIE--------LPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVV 370
EP LP+GF +RT+ G V WAPQ+A+LA ++GGF+TH GW+S++
Sbjct: 316 NIMKEPPGEFTNLEEILPEGFLDRTKDIGKV-IGWAPQVAVLAKPAIGGFVTHCGWNSIL 374
Query: 371 EALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLVE-- 428
E+L FG+P+ YA+Q NA + E EL E ++ + +A + V E
Sbjct: 375 ESLWFGVPMAAWPLYAEQKFNAFEMVE----ELGLAVEIRKYWRGDLLAGEMETVTAEEI 430
Query: 429 EKGQI--------YRDKAKEMK 442
E+G R + KEM
Sbjct: 431 ERGIRCLMEQDSDVRKRVKEMS 452
|
Length = 481 |
| >gnl|CDD|215247 PLN02448, PLN02448, UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Score = 124 bits (314), Expect = 3e-31
Identities = 129/504 (25%), Positives = 202/504 (40%), Gaps = 104/504 (20%)
Query: 9 IAMFPWLAFGHMIPWLELAKLIAQKGHKIF-----------FISTPRNIDRLPRLPQNLA 57
+AM P+ GH+ P + L KL+A + I I + D
Sbjct: 14 VAM-PYPGRGHINPMMNLCKLLASRKPDILITFVVTEEWLGLIGSDPKPDN--------- 63
Query: 58 SMIQFVKISLPHV---DNLRENAEATIDLP--YDEVKYLKQSFDCLEEPMAKLLQSLA-- 110
I+F I P+V + +R D P + V K +E P +LL L
Sbjct: 64 --IRFATI--PNVIPSELVRAA-----DFPGFLEAV-MTK-----MEAPFEQLLDRLEPP 108
Query: 111 PDWLLFDFAAYWLPARARELGIP--------SGFFSIF-TAATLGYFGPSSVLINDSGDH 161
++ D +W IP + FFS+F L G V +++SG+
Sbjct: 109 VTAIVADTYLFWAVGVGNRRNIPVASLWTMSATFFSVFYHFDLLPQNGHFPVELSESGEE 168
Query: 162 LKTPEDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVR 221
DY P S RL + +F + R + + V
Sbjct: 169 R---VDY--------IPGLSSTRLSDLPPIFH---------GNSRRVLKRILEA-FSWVP 207
Query: 222 --------SCMEFEPEWLKLLEQLHRKPVIPVGQL-PTTTGDGDSDAETDTWRSIK--EW 270
S E E + + L+ PV P+G P +S + + +W
Sbjct: 208 KAQYLLFTSFYELEAQAIDALKSKFPFPVYPIGPSIPYMELKDNSSSSNNEDNEPDYFQW 267
Query: 271 LDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELSKLPFFWVLKKRLGQADTEPIELPDG 330
LD Q +GSV+YV+ GS S ++ EIA GL S + F WV + +
Sbjct: 268 LDSQPEGSVLYVSLGSFLSVSSAQMDEIAAGLRDSGVRFLWVARGEASR----------- 316
Query: 331 FEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQGL 390
+E G+V W QL +L H SVGGF TH GW+S +EA+ G+P++ + DQ L
Sbjct: 317 LKEICGDMGLV-VPWCDQLKVLCHSSVGGFWTHCGWNSTLEAVFAGVPMLTFPLFWDQPL 375
Query: 391 NAKL-LEEKQIVELIPRDEG-DGFFTRNSVAESLR--LVLVEEKGQIYRDKAKEMK---- 442
N+KL +E+ +I + R+ G + R +AE ++ + L E+G+ R +AKE++
Sbjct: 376 NSKLIVEDWKIGWRVKREVGEETLVGREEIAELVKRFMDLESEEGKEMRRRAKELQEICR 435
Query: 443 GLFGDKGRHDRYVDNFLNYLKNHR 466
G G D +D F+ + R
Sbjct: 436 GAIAKGGSSDTNLDAFIRDISQGR 459
|
Length = 459 |
| >gnl|CDD|177813 PLN02152, PLN02152, indole-3-acetate beta-glucosyltransferase | Back alignment and domain information |
|---|
Score = 124 bits (313), Expect = 4e-31
Identities = 127/472 (26%), Positives = 210/472 (44%), Gaps = 43/472 (9%)
Query: 9 IAMFPWLAFGHMIPWLELAK-LIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISL 67
+ FP A GH+ P L A+ LI G ++ F + I R N + F+ S
Sbjct: 8 LVTFP--AQGHVNPSLRFARRLIKTTGTRVTFATCLSVIHRSMIPNHNNVENLSFLTFS- 64
Query: 68 PHVDNLRENAEATIDLPYDEVKYLKQSFD-CLEEPMAKLLQSLAP-DWLLFDFAAYWLPA 125
D + + D + + +++ D L + + L +P L++ W P
Sbjct: 65 ---DGFDDGVISNTDDVQNRLVNFERNGDKALSDFIEANLNGDSPVTCLIYTILPNWAPK 121
Query: 126 RARELGIPSGFFSIFTAATLGYFGPSSVLINDSGDHLKTPEDYTR-VPNWVSFPTTISYR 184
AR +PS I A + S N + P R +P+++S T
Sbjct: 122 VARRFHLPSVLLWIQPAFVFDIYYNYSTGNNSVFEFPNLPSLEIRDLPSFLSPSNTNKAA 181
Query: 185 LFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKL---LEQLHRKP 241
+++ + L +ESN + V + EPE+L +E + P
Sbjct: 182 QAVYQELMEFLK-EESNPK--------------ILVNTFDSLEPEFLTAIPNIEMVAVGP 226
Query: 242 VIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALG 301
++P ++ T + G + D S WLD + + SV+YV+FG+ + S++++ E+A
Sbjct: 227 LLPA-EIFTGSESGKDLSVRDQSSSYTLWLDSKTESSVIYVSFGTMVELSKKQIEELARA 285
Query: 302 LELSKLPFFWVLKKRL-------GQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAH 354
L K PF WV+ +L G+ +TE IE GF G++ SW Q+ +L H
Sbjct: 286 LIEGKRPFLWVITDKLNREAKIEGEEETE-IEKIAGFRHELEEVGMI-VSWCSQIEVLRH 343
Query: 355 DSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFT 414
+VG F+TH GWSS +E+L G+P++ ++DQ NAKLLEE + R+ +G
Sbjct: 344 RAVGCFVTHCGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVRENSEGLVE 403
Query: 415 RNSVAESLRLVLVEEKGQIYRDKAKEMKGLF----GDKGRHDRYVDNFLNYL 462
R + L V+ EEK R+ A++ K L G+ G D+ V+ F+ L
Sbjct: 404 RGEIRRCLEAVM-EEKSVELRESAEKWKRLAIEAGGEGGSSDKNVEAFVKTL 454
|
Length = 455 |
| >gnl|CDD|215127 PLN02210, PLN02210, UDP-glucosyl transferase | Back alignment and domain information |
|---|
Score = 117 bits (293), Expect = 2e-28
Identities = 109/402 (27%), Positives = 174/402 (43%), Gaps = 57/402 (14%)
Query: 15 LAF-GHMIPWLELAK--LIAQKGHKIFFISTPRNIDRL-----PRLPQNLASMIQFVKIS 66
LAF GH+ P L+LAK ++ K +T + D L PR P +L F
Sbjct: 16 LAFQGHINPMLKLAKHLSLSSKNLHFTLATTEQARDLLSTVEKPRRPVDLV----FFSDG 71
Query: 67 LPHVDNLRENAEATIDLPYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAAYWLPAR 126
LP D P LK + ++K+++ ++ W+PA
Sbjct: 72 LPKDD------------PRAPETLLKSLNKVGAKNLSKIIEEKRYSCIISSPFTPWVPAV 119
Query: 127 ARELGIPSGFFSIFTAATLGYFGPSSVLINDSGDHLKTPEDYTRVPNWVSFPTTISYRLF 186
A IP I + + N D ED + + P L
Sbjct: 120 AAAHNIPCAILWIQACGAYSVYYRYYMKTNSFPDL----EDLNQTVELPALP------LL 169
Query: 187 EARKVFDILISDESNVSHGY----RFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLHRKPV 242
E R + ++ S +H F L+ V V S E E E ++ + L KPV
Sbjct: 170 EVRDLPSFMLP--SGGAHFNNLMAEFADCLRYVKWVLVNSFYELESEIIESMADL--KPV 225
Query: 243 IPVGQLPTTTGDGDSDAET------DTWRS---IKEWLDEQEKGSVVYVAFGSEAKPSQE 293
IP+G L + GD + ET D +S EWLD+Q + SVVY++FGS + +
Sbjct: 226 IPIGPLVSPFLLGDDEEETLDGKNLDMCKSDDCCMEWLDKQARSSVVYISFGSMLESLEN 285
Query: 294 ELTEIALGLELSKLPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILA 353
++ IA L+ +PF WV++ + + + ++ E G+GVV W+PQ IL+
Sbjct: 286 QVETIAKALKNRGVPFLWVIRPKEKAQNVQVLQ-----EMVKEGQGVV-LEWSPQEKILS 339
Query: 354 HDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQGLNAKLL 395
H ++ F+TH GW+S +E + G+P++ + DQ ++A+LL
Sbjct: 340 HMAISCFVTHCGWNSTIETVVAGVPVVAYPSWTDQPIDARLL 381
|
Length = 456 |
| >gnl|CDD|177830 PLN02173, PLN02173, UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Score = 115 bits (290), Expect = 4e-28
Identities = 73/262 (27%), Positives = 132/262 (50%), Gaps = 23/262 (8%)
Query: 216 DIVAVRSCMEFEPE----WLKLLEQLHRKPVIPVGQLPTTTGDGDSDAETDTWRS----- 266
D V V S + + K+ L P +P L D+D + + +
Sbjct: 195 DFVLVNSFHDLDLHENELLSKVCPVLTIGPTVPSMYLDQQI-KSDNDYDLNLFDLKEAAL 253
Query: 267 IKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELSKLPFFWVLKKRLGQADTEPIE 326
+WLD++ +GSVVY+AFGS AK S E++ EIA + S + WV++ +E +
Sbjct: 254 CTDWLDKRPQGSVVYIAFGSMAKLSSEQMEEIASAI--SNFSYLWVVRA------SEESK 305
Query: 327 LPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYA 386
LP GF E + W+PQL +L++ ++G F+TH GW+S +E L G+P++ + +
Sbjct: 306 LPPGFLETVDKDKSLVLKWSPQLQVLSNKAIGCFMTHCGWNSTMEGLSLGVPMVAMPQWT 365
Query: 387 DQGLNAKLLEEKQIVELIPRDEGD-GFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGL- 444
DQ +NAK +++ V + + E + G R + S++ V+ EK + ++ A + + L
Sbjct: 366 DQPMNAKYIQDVWKVGVRVKAEKESGIAKREEIEFSIKEVMEGEKSKEMKENAGKWRDLA 425
Query: 445 ---FGDKGRHDRYVDNFLNYLK 463
+ G D ++ F++ ++
Sbjct: 426 VKSLSEGGSTDININTFVSKIQ 447
|
Length = 449 |
| >gnl|CDD|215305 PLN02562, PLN02562, UDP-glycosyltransferase | Back alignment and domain information |
|---|
Score = 101 bits (252), Expect = 4e-23
Identities = 60/159 (37%), Positives = 83/159 (52%), Gaps = 13/159 (8%)
Query: 269 EWLDEQEKGSVVYVAFGSEAKPSQE-ELTEIALGLELSKLPFFWVLKKRLGQADTEPIEL 327
WL EQ+ SV+Y++FGS P E + +AL LE S PF WVL + L
Sbjct: 265 GWLQEQKPNSVIYISFGSWVSPIGESNVRTLALALEASGRPFIWVLNPVWREG------L 318
Query: 328 PDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYAD 387
P G+ ER +G V SWAPQL +L H +VG +LTH GW+S +EA+Q L+ D
Sbjct: 319 PPGYVERVSKQGKV-VSWAPQLEVLKHQAVGCYLTHCGWNSTMEAIQCQKRLLCYPVAGD 377
Query: 388 QGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVL 426
Q +N + + + + R G F + V E LR V+
Sbjct: 378 QFVNCAYIVDVWKIGV--RISG---FGQKEVEEGLRKVM 411
|
Length = 448 |
| >gnl|CDD|201077 pfam00201, UDPGT, UDP-glucoronosyl and UDP-glucosyl transferase | Back alignment and domain information |
|---|
Score = 79.8 bits (197), Expect = 7e-16
Identities = 40/132 (30%), Positives = 52/132 (39%), Gaps = 18/132 (13%)
Query: 270 WLDEQEKG--SVVYVAFGSEAKPSQEE-LTEIALGLELSKLPFFWVLKKRLGQADTEPIE 326
Q G VV + GS EE EIA L W
Sbjct: 267 EAFVQSSGEHGVVVFSLGSMVSNIPEEKANEIASALAQIPQKVLWRF------------- 313
Query: 327 LPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYA 386
DG + T GR W PQ +L H F+THAG + V EA+ G+P++ + +
Sbjct: 314 --DGTKPSTLGRNTRLVKWLPQNDLLGHPKTRAFVTHAGSNGVYEAICHGVPMVGMPLFG 371
Query: 387 DQGLNAKLLEEK 398
DQ NAK +E K
Sbjct: 372 DQMDNAKHMEAK 383
|
Length = 500 |
| >gnl|CDD|224732 COG1819, COG1819, Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | Back alignment and domain information |
|---|
Score = 73.2 bits (180), Expect = 5e-14
Identities = 46/184 (25%), Positives = 73/184 (39%), Gaps = 24/184 (13%)
Query: 264 WRSIKEWLDEQEKGS-VVYVAFGSEAKPSQEELTEIALGLELSKLPFFWVLKKRLGQADT 322
+ E +VYV+ G+ + EL I L L+ L ++ LG A
Sbjct: 223 GEAANELPYWIPADRPIVYVSLGTV--GNAVELLAIVLEA-LADLDVRVIVS--LGGARD 277
Query: 323 EPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVL 382
+ +PD + PQL +L + H G + EAL G+PL+V+
Sbjct: 278 TLVNVPDNVIVA---------DYVPQLELLPR--ADAVIHHGGAGTTSEALYAGVPLVVI 326
Query: 383 TCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMK 442
ADQ LNA+ +EE +P +E T + ++ VL + YR A+ +
Sbjct: 327 PDGADQPLNAERVEELGAGIALPFEE----LTEERLRAAVNEVLAD---DSYRRAAERLA 379
Query: 443 GLFG 446
F
Sbjct: 380 EEFK 383
|
Length = 406 |
| >gnl|CDD|99960 cd03784, GT1_Gtf_like, This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Score = 72.8 bits (179), Expect = 6e-14
Identities = 78/447 (17%), Positives = 133/447 (29%), Gaps = 82/447 (18%)
Query: 9 IAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQ-----FV 63
+ + + G + P + LA + GH++ + P A +++ FV
Sbjct: 3 VLITTIGSRGDVQPLVALAWALRAAGHEVRVATPP-----------EFADLVEAAGLEFV 51
Query: 64 KISLPHVDNLR---ENAEATIDLPYDEVKYLKQSFDCLEEPMAKLLQSLA---PDWLLFD 117
+ + L NA + P + L+ E + L+ + PD ++ D
Sbjct: 52 PVGGDPDELLASPERNAGLLLLGPGLLLGALRLLRREAEAMLDDLVAAARDWGPDLVVAD 111
Query: 118 FAAYWLPARARELGIPS-GFFSIFTAATLGYFGPSSVLINDSGDHLKTPEDYTRVPNWVS 176
A+ A LGIP+ T + P L W
Sbjct: 112 PLAFAGAVAAEALGIPAVRLLLGPDTPTSAFPPPLGRANLRLYALL-------EAELWQD 164
Query: 177 FPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQ 236
+ + + D S+V Y F ++ P+W
Sbjct: 165 LLGAWLRARRRRLGLPPLSLLDGSDVPELYGFSPAVL-----------PPPPDW------ 207
Query: 237 LHRKPVIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELT 296
R ++ +G E WL VYV FGS E L
Sbjct: 208 -PRFDLVTGYGFRDVPYNGPPPPE--------LWLFLAAGRPPVYVGFGSMVVRDPEALA 258
Query: 297 EIAL-GLELSKLPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHD 355
+ + + LG +LPD + P +L
Sbjct: 259 RLDVEAVATLGQRAILS----LGWGGLGAEDLPDNVRVV---------DFVPHDWLLPR- 304
Query: 356 SVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQI-VELIPRDEGDGFFT 414
+ H G + AL+ G+P +V+ + DQ A + E L PR+ T
Sbjct: 305 -CAAVVHHGGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAGPALDPRE-----LT 358
Query: 415 RNSVAESLRLVLVEEKGQIYRDKAKEM 441
+A +LR +L R +A +
Sbjct: 359 AERLAAALRRLLDPP----SRRRAAAL 381
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. Length = 401 |
| >gnl|CDD|233407 TIGR01426, MGT, glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Score = 57.0 bits (138), Expect = 8e-09
Identities = 38/138 (27%), Positives = 62/138 (44%), Gaps = 18/138 (13%)
Query: 326 ELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCY 385
ELP E R W PQL IL F+TH G +S +EAL G+P++ +
Sbjct: 272 ELPPNVEVRQ---------WVPQLEILKKADA--FITHGGMNSTMEALFNGVPMVAVPQG 320
Query: 386 ADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLF 445
ADQ + A+ + E + +P +E T + E++ VL + Y ++ ++M+
Sbjct: 321 ADQPMTARRIAELGLGRHLPPEE----VTAEKLREAVLAVLSD---PRYAERLRKMRAEI 373
Query: 446 GDKGRHDRYVDNFLNYLK 463
+ G R D +L
Sbjct: 374 REAGGARRAADEIEGFLA 391
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production [Cellular processes, Toxin production and resistance]. Length = 392 |
| >gnl|CDD|223071 PHA03392, egt, ecdysteroid UDP-glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 55.3 bits (134), Expect = 3e-08
Identities = 40/133 (30%), Positives = 59/133 (44%), Gaps = 16/133 (12%)
Query: 267 IKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLE-LSKLPFFWVLKKRLGQADTEPI 325
++E+L+ G VVYV+FGS + + + + L KLP+ + K + E I
Sbjct: 287 LEEFLNNSTNG-VVYVSFGSSIDTNDMDNEFLQMLLRTFKKLPYNVLWKYD---GEVEAI 342
Query: 326 ELPDGFEERTRGRGVVYT-SWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTC 384
LP V T W PQ A+L H +V F+T G S EA+ +P++ L
Sbjct: 343 NLPAN----------VLTQKWFPQRAVLKHKNVKAFVTQGGVQSTDEAIDALVPMVGLPM 392
Query: 385 YADQGLNAKLLEE 397
DQ N E
Sbjct: 393 MGDQFYNTNKYVE 405
|
Length = 507 |
| >gnl|CDD|233407 TIGR01426, MGT, glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 0.001
Identities = 31/127 (24%), Positives = 57/127 (44%), Gaps = 11/127 (8%)
Query: 16 AFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVDNLRE 75
A GH+ P L + + + +GH++ + +T +R+ +LP DN E
Sbjct: 5 AHGHVNPTLGVVEELVARGHRVTYATTEEFAERVEAAGAEFVLY----GSALPPPDNPPE 60
Query: 76 N-AEATIDLPYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAAYWLPARARELGIPS 134
N E ID+ K L ++ D L + + + + PD +++D A++ AR+ +P
Sbjct: 61 NTEEEPIDII---EKLLDEAEDVLPQ-LEEAYKGDRPDLIVYDIASWTGRLLARKWDVP- 115
Query: 135 GFFSIFT 141
S F
Sbjct: 116 -VISSFP 121
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production [Cellular processes, Toxin production and resistance]. Length = 392 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 478 | |||
| PLN02670 | 472 | transferase, transferring glycosyl groups | 100.0 | |
| PLN02208 | 442 | glycosyltransferase family protein | 100.0 | |
| PLN02764 | 453 | glycosyltransferase family protein | 100.0 | |
| PLN00414 | 446 | glycosyltransferase family protein | 100.0 | |
| PLN02863 | 477 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 100.0 | |
| PLN02410 | 451 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 100.0 | |
| PLN02173 | 449 | UDP-glucosyl transferase family protein | 100.0 | |
| PLN02992 | 481 | coniferyl-alcohol glucosyltransferase | 100.0 | |
| PLN02555 | 480 | limonoid glucosyltransferase | 100.0 | |
| PLN02210 | 456 | UDP-glucosyl transferase | 100.0 | |
| PLN03007 | 482 | UDP-glucosyltransferase family protein | 100.0 | |
| PLN02534 | 491 | UDP-glycosyltransferase | 100.0 | |
| PLN02562 | 448 | UDP-glycosyltransferase | 100.0 | |
| PLN02207 | 468 | UDP-glycosyltransferase | 100.0 | |
| PLN03015 | 470 | UDP-glucosyl transferase | 100.0 | |
| PLN02448 | 459 | UDP-glycosyltransferase family protein | 100.0 | |
| PLN03004 | 451 | UDP-glycosyltransferase | 100.0 | |
| PLN02152 | 455 | indole-3-acetate beta-glucosyltransferase | 100.0 | |
| PLN00164 | 480 | glucosyltransferase; Provisional | 100.0 | |
| PLN02554 | 481 | UDP-glycosyltransferase family protein | 100.0 | |
| PLN02167 | 475 | UDP-glycosyltransferase family protein | 100.0 | |
| PHA03392 | 507 | egt ecdysteroid UDP-glucosyltransferase; Provision | 100.0 | |
| PF00201 | 500 | UDPGT: UDP-glucoronosyl and UDP-glucosyl transfera | 100.0 | |
| TIGR01426 | 392 | MGT glycosyltransferase, MGT family. This model de | 100.0 | |
| cd03784 | 401 | GT1_Gtf_like This family includes the Gtfs, a grou | 100.0 | |
| COG1819 | 406 | Glycosyl transferases, related to UDP-glucuronosyl | 100.0 | |
| KOG1192 | 496 | consensus UDP-glucuronosyl and UDP-glucosyl transf | 100.0 | |
| PRK12446 | 352 | undecaprenyldiphospho-muramoylpentapeptide beta-N- | 99.95 | |
| PF13528 | 318 | Glyco_trans_1_3: Glycosyl transferase family 1 | 99.95 | |
| COG0707 | 357 | MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami | 99.93 | |
| TIGR00661 | 321 | MJ1255 conserved hypothetical protein. This model | 99.92 | |
| PRK00726 | 357 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.9 | |
| cd03785 | 350 | GT1_MurG MurG is an N-acetylglucosaminyltransferas | 99.86 | |
| TIGR01133 | 348 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.82 | |
| COG4671 | 400 | Predicted glycosyl transferase [General function p | 99.8 | |
| PRK13609 | 380 | diacylglycerol glucosyltransferase; Provisional | 99.79 | |
| TIGR00215 | 385 | lpxB lipid-A-disaccharide synthase. Lipid-A precur | 99.78 | |
| PRK13608 | 391 | diacylglycerol glucosyltransferase; Provisional | 99.74 | |
| TIGR03590 | 279 | PseG pseudaminic acid biosynthesis-associated prot | 99.72 | |
| PLN02605 | 382 | monogalactosyldiacylglycerol synthase | 99.7 | |
| PRK00025 | 380 | lpxB lipid-A-disaccharide synthase; Reviewed | 99.68 | |
| TIGR03492 | 396 | conserved hypothetical protein. This protein famil | 99.59 | |
| PF04101 | 167 | Glyco_tran_28_C: Glycosyltransferase family 28 C-t | 99.55 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to | 99.53 | |
| PLN02871 | 465 | UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | 99.53 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related | 99.45 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to | 99.43 | |
| COG3980 | 318 | spsG Spore coat polysaccharide biosynthesis protei | 99.43 | |
| PF03033 | 139 | Glyco_transf_28: Glycosyltransferase family 28 N-t | 99.4 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related | 99.36 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related | 99.36 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 99.36 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related | 99.34 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related | 99.33 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 99.32 | |
| PF04007 | 335 | DUF354: Protein of unknown function (DUF354); Inte | 99.29 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely r | 99.28 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related | 99.27 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related | 99.26 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related | 99.25 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to | 99.23 | |
| PRK05749 | 425 | 3-deoxy-D-manno-octulosonic-acid transferase; Revi | 99.22 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino | 99.22 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related | 99.2 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely rela | 99.17 | |
| cd03786 | 363 | GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th | 99.16 | |
| TIGR00236 | 365 | wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras | 99.16 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related | 99.15 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related | 99.13 | |
| PRK14089 | 347 | ipid-A-disaccharide synthase; Provisional | 99.1 | |
| cd03805 | 392 | GT1_ALG2_like This family is most closely related | 99.1 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related | 99.06 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltran | 99.06 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related | 99.02 | |
| TIGR02149 | 388 | glgA_Coryne glycogen synthase, Corynebacterium fam | 99.01 | |
| cd04951 | 360 | GT1_WbdM_like This family is most closely related | 99.0 | |
| PRK09922 | 359 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D | 98.99 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely relate | 98.98 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the trans | 98.97 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 98.97 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related | 98.97 | |
| TIGR02472 | 439 | sucr_P_syn_N sucrose-phosphate synthase, putative, | 98.96 | |
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system ass | 98.95 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related | 98.94 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to | 98.92 | |
| COG1519 | 419 | KdtA 3-deoxy-D-manno-octulosonic-acid transferase | 98.92 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related | 98.86 | |
| TIGR03087 | 397 | stp1 sugar transferase, PEP-CTERM/EpsH1 system ass | 98.85 | |
| PLN02846 | 462 | digalactosyldiacylglycerol synthase | 98.82 | |
| PLN02275 | 371 | transferase, transferring glycosyl groups | 98.8 | |
| TIGR03568 | 365 | NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, | 98.75 | |
| PRK15427 | 406 | colanic acid biosynthesis glycosyltransferase WcaL | 98.74 | |
| PRK01021 | 608 | lpxB lipid-A-disaccharide synthase; Reviewed | 98.73 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylas | 98.72 | |
| TIGR02470 | 784 | sucr_synth sucrose synthase. This model represents | 98.68 | |
| PRK15484 | 380 | lipopolysaccharide 1,2-N-acetylglucosaminetransfer | 98.67 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related | 98.66 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 98.66 | |
| COG0763 | 381 | LpxB Lipid A disaccharide synthetase [Cell envelop | 98.65 | |
| PRK00654 | 466 | glgA glycogen synthase; Provisional | 98.63 | |
| KOG3349 | 170 | consensus Predicted glycosyltransferase [General f | 98.59 | |
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is mo | 98.53 | |
| PLN00142 | 815 | sucrose synthase | 98.47 | |
| PF02350 | 346 | Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; | 98.46 | |
| PF02684 | 373 | LpxB: Lipid-A-disaccharide synthetase; InterPro: I | 98.46 | |
| TIGR02095 | 473 | glgA glycogen/starch synthases, ADP-glucose type. | 98.41 | |
| PLN02949 | 463 | transferase, transferring glycosyl groups | 98.4 | |
| COG0381 | 383 | WecB UDP-N-acetylglucosamine 2-epimerase [Cell env | 98.37 | |
| cd04950 | 373 | GT1_like_1 Glycosyltransferases catalyze the trans | 98.31 | |
| PRK10125 | 405 | putative glycosyl transferase; Provisional | 98.31 | |
| PLN02316 | 1036 | synthase/transferase | 98.21 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related | 98.18 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related | 98.16 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related | 98.12 | |
| PF00534 | 172 | Glycos_transf_1: Glycosyl transferases group 1; In | 98.08 | |
| PRK09814 | 333 | beta-1,6-galactofuranosyltransferase; Provisional | 98.06 | |
| TIGR02918 | 500 | accessory Sec system glycosylation protein GtfA. M | 98.06 | |
| PRK14099 | 485 | glycogen synthase; Provisional | 97.98 | |
| PLN02501 | 794 | digalactosyldiacylglycerol synthase | 97.89 | |
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases | 97.87 | |
| COG5017 | 161 | Uncharacterized conserved protein [Function unknow | 97.82 | |
| PF13844 | 468 | Glyco_transf_41: Glycosyl transferase family 41; P | 97.74 | |
| PRK15490 | 578 | Vi polysaccharide biosynthesis protein TviE; Provi | 97.7 | |
| PRK10017 | 426 | colanic acid biosynthesis protein; Provisional | 97.67 | |
| COG1817 | 346 | Uncharacterized protein conserved in archaea [Func | 97.66 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 97.55 | |
| PF13692 | 135 | Glyco_trans_1_4: Glycosyl transferases group 1; PD | 97.41 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to | 97.41 | |
| TIGR02193 | 319 | heptsyl_trn_I lipopolysaccharide heptosyltransfera | 97.39 | |
| PF13477 | 139 | Glyco_trans_4_2: Glycosyl transferase 4-like | 97.24 | |
| PF06258 | 311 | Mito_fiss_Elm1: Mitochondrial fission ELM1; InterP | 96.74 | |
| PF13579 | 160 | Glyco_trans_4_4: Glycosyl transferase 4-like domai | 96.68 | |
| PRK10422 | 352 | lipopolysaccharide core biosynthesis protein; Prov | 96.66 | |
| PHA01630 | 331 | putative group 1 glycosyl transferase | 96.45 | |
| TIGR02201 | 344 | heptsyl_trn_III lipopolysaccharide heptosyltransfe | 96.34 | |
| PHA01633 | 335 | putative glycosyl transferase group 1 | 96.32 | |
| PF06722 | 97 | DUF1205: Protein of unknown function (DUF1205); In | 96.24 | |
| PRK14098 | 489 | glycogen synthase; Provisional | 96.22 | |
| PRK10916 | 348 | ADP-heptose:LPS heptosyltransferase II; Provisiona | 96.0 | |
| COG3914 | 620 | Spy Predicted O-linked N-acetylglucosamine transfe | 95.89 | |
| TIGR02195 | 334 | heptsyl_trn_II lipopolysaccharide heptosyltransfer | 95.65 | |
| PRK10964 | 322 | ADP-heptose:LPS heptosyl transferase I; Provisiona | 95.39 | |
| KOG4626 | 966 | consensus O-linked N-acetylglucosamine transferase | 95.36 | |
| PF01975 | 196 | SurE: Survival protein SurE; InterPro: IPR002828 T | 95.26 | |
| PF02571 | 249 | CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: | 95.23 | |
| COG3660 | 329 | Predicted nucleoside-diphosphate-sugar epimerase [ | 95.19 | |
| PF13439 | 177 | Glyco_transf_4: Glycosyltransferase Family 4; PDB: | 95.05 | |
| cd03788 | 460 | GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a | 95.03 | |
| COG0859 | 334 | RfaF ADP-heptose:LPS heptosyltransferase [Cell env | 94.88 | |
| cd03789 | 279 | GT1_LPS_heptosyltransferase Lipopolysaccharide hep | 94.84 | |
| PF12000 | 171 | Glyco_trans_4_3: Gkycosyl transferase family 4 gro | 94.62 | |
| TIGR02919 | 438 | accessory Sec system glycosyltransferase GtfB. Mem | 94.19 | |
| PF13524 | 92 | Glyco_trans_1_2: Glycosyl transferases group 1 | 93.92 | |
| COG1618 | 179 | Predicted nucleotide kinase [Nucleotide transport | 93.89 | |
| COG0438 | 381 | RfaG Glycosyltransferase [Cell envelope biogenesis | 93.53 | |
| TIGR03713 | 519 | acc_sec_asp1 accessory Sec system protein Asp1. Th | 93.17 | |
| COG0496 | 252 | SurE Predicted acid phosphatase [General function | 92.99 | |
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 92.77 | |
| PF00731 | 150 | AIRC: AIR carboxylase; InterPro: IPR000031 Phospho | 92.34 | |
| COG4370 | 412 | Uncharacterized protein conserved in bacteria [Fun | 91.74 | |
| TIGR02400 | 456 | trehalose_OtsA alpha,alpha-trehalose-phosphate syn | 91.24 | |
| PF08660 | 170 | Alg14: Oligosaccharide biosynthesis protein Alg14 | 91.19 | |
| PRK13933 | 253 | stationary phase survival protein SurE; Provisiona | 90.55 | |
| PRK13932 | 257 | stationary phase survival protein SurE; Provisiona | 90.4 | |
| PF06925 | 169 | MGDG_synth: Monogalactosyldiacylglycerol (MGDG) sy | 88.4 | |
| PF02951 | 119 | GSH-S_N: Prokaryotic glutathione synthetase, N-ter | 88.28 | |
| PRK08057 | 248 | cobalt-precorrin-6x reductase; Reviewed | 86.51 | |
| PF07429 | 360 | Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc | 85.59 | |
| PRK06849 | 389 | hypothetical protein; Provisional | 85.09 | |
| PRK00346 | 250 | surE 5'(3')-nucleotidase/polyphosphatase; Provisio | 84.93 | |
| COG1703 | 323 | ArgK Putative periplasmic protein kinase ArgK and | 84.5 | |
| PRK13935 | 253 | stationary phase survival protein SurE; Provisiona | 84.5 | |
| COG0003 | 322 | ArsA Predicted ATPase involved in chromosome parti | 84.03 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 83.23 | |
| PF02310 | 121 | B12-binding: B12 binding domain; InterPro: IPR0061 | 82.87 | |
| PRK02261 | 137 | methylaspartate mutase subunit S; Provisional | 82.86 | |
| cd03793 | 590 | GT1_Glycogen_synthase_GSY2_like Glycogen synthase, | 82.46 | |
| COG0052 | 252 | RpsB Ribosomal protein S2 [Translation, ribosomal | 82.11 | |
| KOG2941 | 444 | consensus Beta-1,4-mannosyltransferase [Posttransl | 81.85 | |
| PF05159 | 269 | Capsule_synth: Capsule polysaccharide biosynthesis | 81.7 | |
| PF09314 | 185 | DUF1972: Domain of unknown function (DUF1972); Int | 81.52 | |
| PRK13934 | 266 | stationary phase survival protein SurE; Provisiona | 81.52 | |
| PF01012 | 164 | ETF: Electron transfer flavoprotein domain; InterP | 80.41 | |
| PRK02797 | 322 | 4-alpha-L-fucosyltransferase; Provisional | 80.23 | |
| TIGR00087 | 244 | surE 5'/3'-nucleotidase SurE. E. coli SurE is Reco | 80.04 |
| >PLN02670 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-68 Score=529.70 Aligned_cols=465 Identities=51% Similarity=0.929 Sum_probs=354.0
Q ss_pred CCCCCccEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCCCCCCCCcccc
Q 011765 1 MADNSKLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVDNLRENAEAT 80 (478)
Q Consensus 1 ~~~~~~~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~~ 80 (478)
|....+.||+++|+|++||++|++.||+.|+.||..|||++++.+...+........+.++++.+|+|..++++.+....
T Consensus 1 ~~~~~~~HVvl~P~paqGHi~P~l~LAk~La~~G~~vT~v~t~~n~~~~~~~~~~~~~~i~~~~lp~p~~dglp~~~~~~ 80 (472)
T PLN02670 1 MKREEVLHVAMFPWLAMGHLIPFLRLSKLLAQKGHKISFISTPRNLHRLPKIPSQLSSSITLVSFPLPSVPGLPSSAESS 80 (472)
T ss_pred CCCCCCcEEEEeCChhhhHHHHHHHHHHHHHhCCCEEEEEeCCchHHhhhhccccCCCCeeEEECCCCccCCCCCCcccc
Confidence 66677889999999999999999999999999999999999998765554321111234999999988777887654433
Q ss_pred CCCChhHHHHHHHHHhhhhHHHHHHHhhcCCCEEEEcCCcccHHHHHHHhCCCeEEEecchHHHHHhhccccccccccCC
Q 011765 81 IDLPYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAAYWLPARARELGIPSGFFSIFTAATLGYFGPSSVLINDSGD 160 (478)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (478)
.+........+......+.+.+++++++.+++|||+|.+.+|+..+|+++|||.+.++++++..+..+.++..+...+..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~cvI~D~f~~wa~~vA~~~gIP~~~f~~~~a~~~~~~~~~~~~~~~~~~ 160 (472)
T PLN02670 81 TDVPYTKQQLLKKAFDLLEPPLTTFLETSKPDWIIYDYASHWLPSIAAELGISKAFFSLFTAATLSFIGPPSSLMEGGDL 160 (472)
T ss_pred cccchhhHHHHHHHHHHhHHHHHHHHHhCCCcEEEECCcchhHHHHHHHcCCCEEEEehhhHHHHHHHhhhHhhhhcccC
Confidence 33322222455556666788888988888899999999999999999999999999999999988876644322221111
Q ss_pred CCCCCCcccCCCcccccccccccchhhhhhhhhhhcCCcccchhhhhhhccccCCcEEEEcCcCccChHHHHHHHhhcCC
Q 011765 161 HLKTPEDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLHRK 240 (478)
Q Consensus 161 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~~~~~~~ 240 (478)
+.. .......+.++|.+..+.++..+++++..........+....+......+++++++|||++||+..++.++..+++
T Consensus 161 ~~~-~~~~~~~p~~~P~~~~~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~gvlvNTf~eLE~~~l~~l~~~~~~ 239 (472)
T PLN02670 161 RST-AEDFTVVPPWVPFESNIVFRYHEVTKYVEKTEEDETGPSDSVRFGFAIGGSDVVIIRSSPEFEPEWFDLLSDLYRK 239 (472)
T ss_pred CCc-cccccCCCCcCCCCccccccHHHhhHHHhccCccchHHHHHHHHHhhcccCCEEEEeCHHHHhHHHHHHHHHhhCC
Confidence 110 1111112223343333234444444433211111111222223333456789999999999999999999886666
Q ss_pred CeeeeccCCCCCCCCCCCC--CCCChhhHhhhcccCCCCceEEEEeCcccCCCHHHHHHHHHHHHhCCCCEEEEEecCCC
Q 011765 241 PVIPVGQLPTTTGDGDSDA--ETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELSKLPFFWVLKKRLG 318 (478)
Q Consensus 241 ~~~~vGp~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~ 318 (478)
+++.|||+........... ....++++.+||+.++++++|||||||....+.+++.+++.+|+.++.+|||+++...+
T Consensus 240 ~v~~VGPl~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gl~~s~~~FlWv~r~~~~ 319 (472)
T PLN02670 240 PIIPIGFLPPVIEDDEEDDTIDVKGWVRIKEWLDKQRVNSVVYVALGTEASLRREEVTELALGLEKSETPFFWVLRNEPG 319 (472)
T ss_pred CeEEEecCCccccccccccccccchhHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHHCCCCEEEEEcCCcc
Confidence 7999999975311100000 01235789999999988899999999999999999999999999999999999985322
Q ss_pred CCCCCCCCCChhhhhhcCCCcEEEeccCChhhhhcCCCceeeeeccChhhHHHHHHhCCcEeccccccchhhHHHHHhhc
Q 011765 319 QADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEK 398 (478)
Q Consensus 319 ~~~~~~~~~p~~~~~~~~~~n~~~~~~vpq~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~ 398 (478)
...+....+|++|.++.+.+++++.+|+||.+||+|+++++|||||||||++||+++|||||++|++.||+.||++++++
T Consensus 320 ~~~~~~~~lp~~f~~~~~~rG~vv~~W~PQ~~IL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~ 399 (472)
T PLN02670 320 TTQNALEMLPDGFEERVKGRGMIHVGWVPQVKILSHESVGGFLTHCGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLHGK 399 (472)
T ss_pred cccchhhcCChHHHHhccCCCeEEeCcCCHHHHhcCcccceeeecCCcchHHHHHHcCCCEEeCcchhccHHHHHHHHHc
Confidence 10111236899999999988999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEEeeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHhcc
Q 011765 399 QIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLKNHR 466 (478)
Q Consensus 399 g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 466 (478)
|+|+.++..++++.++.++|+++|+++|.+++.++||+||+++++.+++.++..++++.|++++.+++
T Consensus 400 g~Gv~l~~~~~~~~~~~e~i~~av~~vm~~~~g~~~r~~a~~l~~~~~~~~~~~~~~~~~~~~l~~~~ 467 (472)
T PLN02670 400 KLGLEVPRDERDGSFTSDSVAESVRLAMVDDAGEEIRDKAKEMRNLFGDMDRNNRYVDELVHYLRENR 467 (472)
T ss_pred CeeEEeeccccCCcCcHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHhc
Confidence 99999975432345899999999999998544568999999999999999999999999999998877
|
|
| >PLN02208 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-64 Score=499.78 Aligned_cols=433 Identities=28% Similarity=0.510 Sum_probs=334.8
Q ss_pred ccEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCCCCCCCCccccCCCCh
Q 011765 6 KLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVDNLRENAEATIDLPY 85 (478)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~~~~~~~ 85 (478)
++||+++|+|++||++|++.||+.|+++||+|||++++.+...+...+ .....+.+..++++..++++.+.....+...
T Consensus 4 ~~hvv~~P~paqGHi~P~l~LAk~La~~G~~VT~vtt~~~~~~i~~~~-a~~~~i~~~~l~~p~~dgLp~g~~~~~~l~~ 82 (442)
T PLN02208 4 KFHAFMFPWFAFGHMIPFLHLANKLAEKGHRVTFLLPKKAQKQLEHHN-LFPDSIVFHPLTIPPVNGLPAGAETTSDIPI 82 (442)
T ss_pred CCEEEEecCccccHHHHHHHHHHHHHhCCCEEEEEeccchhhhhhccc-CCCCceEEEEeCCCCccCCCCCcccccchhH
Confidence 689999999999999999999999999999999999998877665443 1123477888776544567666443223323
Q ss_pred hHHHHHHHHHhhhhHHHHHHHhhcCCCEEEEcCCcccHHHHHHHhCCCeEEEecchHHHHHhhccccccccccCCCCCCC
Q 011765 86 DEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAAYWLPARARELGIPSGFFSIFTAATLGYFGPSSVLINDSGDHLKTP 165 (478)
Q Consensus 86 ~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (478)
.....+......+.+.+++++++.+|||||+| ++.|+..+|+++|||++.+|+++++.+. +.+... +
T Consensus 83 ~l~~~~~~~~~~~~~~l~~~L~~~~~~cVV~D-~~~wa~~vA~e~giP~~~f~~~~a~~~~-~~~~~~--~--------- 149 (442)
T PLN02208 83 SMDNLLSEALDLTRDQVEAAVRALRPDLIFFD-FAQWIPEMAKEHMIKSVSYIIVSATTIA-HTHVPG--G--------- 149 (442)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEC-CcHhHHHHHHHhCCCEEEEEhhhHHHHH-HHccCc--c---------
Confidence 33345555666788889999988899999999 6789999999999999999999998765 333210 0
Q ss_pred CcccCCCcccccccccccchhhhhhhhhhhcCCcccch-hhhhhhccccCCcEEEEcCcCccChHHHHHHHhhcCCCeee
Q 011765 166 EDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNVS-HGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLHRKPVIP 244 (478)
Q Consensus 166 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~~~~~~~~~~~ 244 (478)
....+.+++|.. ...++..+++.+ ......+. ....+.....+++++++|||++||+..++++...+.++++.
T Consensus 150 -~~~~~~pglp~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~vl~Ntf~eLE~~~~~~~~~~~~~~v~~ 223 (442)
T PLN02208 150 -KLGVPPPGYPSS-KVLFRENDAHAL----ATLSIFYKRLYHQITTGLKSCDVIALRTCKEIEGKFCDYISRQYHKKVLL 223 (442)
T ss_pred -ccCCCCCCCCCc-ccccCHHHcCcc----cccchHHHHHHHHHHhhhccCCEEEEECHHHHHHHHHHHHHhhcCCCEEE
Confidence 000112223321 111222222221 01111121 12223234567899999999999999999998877788999
Q ss_pred eccCCCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccCCCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCC
Q 011765 245 VGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELSKLPFFWVLKKRLGQADTEP 324 (478)
Q Consensus 245 vGp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~ 324 (478)
|||+....... ...++++.+|||.++++++|||||||...++.+++.+++.+++.++.+|+|+++...+. .+..
T Consensus 224 vGpl~~~~~~~-----~~~~~~~~~wLd~~~~~sVvyvSfGS~~~l~~~q~~e~~~~l~~s~~pf~wv~r~~~~~-~~~~ 297 (442)
T PLN02208 224 TGPMFPEPDTS-----KPLEEQWSHFLSGFPPKSVVFCSLGSQIILEKDQFQELCLGMELTGLPFLIAVKPPRGS-STVQ 297 (442)
T ss_pred EeecccCcCCC-----CCCHHHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEEeCCCcc-cchh
Confidence 99998543211 23467899999999888999999999998899999999999999999999999854211 0023
Q ss_pred CCCChhhhhhcCCCcEEEeccCChhhhhcCCCceeeeeccChhhHHHHHHhCCcEeccccccchhhHHHHHhh-cCeEEE
Q 011765 325 IELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEE-KQIVEL 403 (478)
Q Consensus 325 ~~~p~~~~~~~~~~n~~~~~~vpq~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~-~g~G~~ 403 (478)
..+|++|+++.+.+|+++.+|+||.+||+|+++++|||||||||++||+++|||||++|++.||+.||+++++ +|+|+.
T Consensus 298 ~~lp~~f~~r~~~~g~~v~~W~PQ~~iL~H~~v~~FvtHcG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~ 377 (442)
T PLN02208 298 EGLPEGFEERVKGRGVVWGGWVQQPLILDHPSIGCFVNHCGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVE 377 (442)
T ss_pred hhCCHHHHHHHhcCCcEeeccCCHHHHhcCCccCeEEccCCchHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEE
Confidence 4689999999999999999999999999999999999999999999999999999999999999999998776 799999
Q ss_pred eeccCCCCcccHHHHHHHHHHHhcc--cchHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHhc
Q 011765 404 IPRDEGDGFFTRNSVAESLRLVLVE--EKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLKNH 465 (478)
Q Consensus 404 l~~~~~~~~~~~~~l~~~i~~ll~~--~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~ 465 (478)
++..+ +|.++.++|+++|++++++ |+.+.+|++++++++.+.+.|++.++++.+++.++++
T Consensus 378 ~~~~~-~~~~~~~~l~~ai~~~m~~~~e~g~~~r~~~~~~~~~~~~~gsS~~~l~~~v~~l~~~ 440 (442)
T PLN02208 378 VSREK-TGWFSKESLSNAIKSVMDKDSDLGKLVRSNHTKLKEILVSPGLLTGYVDKFVEELQEY 440 (442)
T ss_pred ecccc-CCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHh
Confidence 97643 4568999999999999974 2356799999999999998888999999999988654
|
|
| >PLN02764 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-64 Score=492.94 Aligned_cols=443 Identities=28% Similarity=0.512 Sum_probs=336.6
Q ss_pred CCCCCccEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCCCCCCCCcccc
Q 011765 1 MADNSKLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVDNLRENAEAT 80 (478)
Q Consensus 1 ~~~~~~~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~~ 80 (478)
|+.+ ++||+++|++++||++|++.||+.|+.+|+.|||++++.+...+.... ....++.+..+++|..++++.+.+..
T Consensus 1 ~~~~-~~Hvvl~P~paqGHi~P~l~LAk~La~~g~~vT~~tt~~~~~~~~~~~-~~~~~~~v~~~~~p~~~glp~g~e~~ 78 (453)
T PLN02764 1 MGGL-KFHVLMYPWFATGHMTPFLFLANKLAEKGHTVTFLLPKKALKQLEHLN-LFPHNIVFRSVTVPHVDGLPVGTETV 78 (453)
T ss_pred CCCC-CcEEEEECCcccccHHHHHHHHHHHHhCCCEEEEEeCcchhhhhcccc-cCCCCceEEEEECCCcCCCCCccccc
Confidence 5554 689999999999999999999999999999999999998765444321 01113445555544445777665444
Q ss_pred CCCChhHHHHHHHHHhhhhHHHHHHHhhcCCCEEEEcCCcccHHHHHHHhCCCeEEEecchHHHHHhhccccccccccCC
Q 011765 81 IDLPYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAAYWLPARARELGIPSGFFSIFTAATLGYFGPSSVLINDSGD 160 (478)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (478)
.+...+....+......+.+.+.+++++.+|||||+| +.+|+..+|+++|||.+.++++++..+..+..+. +.
T Consensus 79 ~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~~iV~D-~~~w~~~vA~~~gIP~~~f~~~~a~~~~~~~~~~-----~~- 151 (453)
T PLN02764 79 SEIPVTSADLLMSAMDLTRDQVEVVVRAVEPDLIFFD-FAHWIPEVARDFGLKTVKYVVVSASTIASMLVPG-----GE- 151 (453)
T ss_pred ccCChhHHHHHHHHHHHhHHHHHHHHHhCCCCEEEEC-CchhHHHHHHHhCCCEEEEEcHHHHHHHHHhccc-----cc-
Confidence 3444344455666666778889999988889999999 4889999999999999999999999888765321 00
Q ss_pred CCCCCCcccCCCcccccccccccchhhhhhhhhhhc--CCcccchhhhhhhccccCCcEEEEcCcCccChHHHHHHHhhc
Q 011765 161 HLKTPEDYTRVPNWVSFPTTISYRLFEARKVFDILI--SDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLH 238 (478)
Q Consensus 161 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~~~~~ 238 (478)
.+.+.+++|.. ...++...+..+..... ..........++......++++++|||++||+..++++....
T Consensus 152 -------~~~~~pglp~~-~v~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~vlvNTf~eLE~~~~~~~~~~~ 223 (453)
T PLN02764 152 -------LGVPPPGYPSS-KVLLRKQDAYTMKNLEPTNTIDVGPNLLERVTTSLMNSDVIAIRTAREIEGNFCDYIEKHC 223 (453)
T ss_pred -------CCCCCCCCCCC-cccCcHhhCcchhhcCCCccchhHHHHHHHHHHhhccCCEEEEeccHHhhHHHHHHHHhhc
Confidence 00111223311 11122222222111000 000111233334345667899999999999999999987755
Q ss_pred CCCeeeeccCCCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccCCCHHHHHHHHHHHHhCCCCEEEEEecCCC
Q 011765 239 RKPVIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELSKLPFFWVLKKRLG 318 (478)
Q Consensus 239 ~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~ 318 (478)
+++++.|||+....... ....+++.+|||.++++++|||||||....+.+++.+++.+|+.++.+|+|+++....
T Consensus 224 ~~~v~~VGPL~~~~~~~-----~~~~~~cl~WLD~q~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~pflwv~r~~~~ 298 (453)
T PLN02764 224 RKKVLLTGPVFPEPDKT-----RELEERWVKWLSGYEPDSVVFCALGSQVILEKDQFQELCLGMELTGSPFLVAVKPPRG 298 (453)
T ss_pred CCcEEEeccCccCcccc-----ccchhHHHHHHhCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence 56799999997532110 1124679999999999999999999999899999999999999999999999985422
Q ss_pred CCCCCCCCCChhhhhhcCCCcEEEeccCChhhhhcCCCceeeeeccChhhHHHHHHhCCcEeccccccchhhHHHHHh-h
Q 011765 319 QADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQGLNAKLLE-E 397 (478)
Q Consensus 319 ~~~~~~~~~p~~~~~~~~~~n~~~~~~vpq~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~-~ 397 (478)
.. +....+|++|+++.+.+++++.+|+||.+||+|+++++|||||||||++||+++|||||++|++.||+.||++++ .
T Consensus 299 ~~-~~~~~lp~~f~~r~~grG~v~~~W~PQ~~vL~h~~v~~FvtH~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~ 377 (453)
T PLN02764 299 SS-TIQEALPEGFEERVKGRGVVWGGWVQQPLILSHPSVGCFVSHCGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDE 377 (453)
T ss_pred Cc-chhhhCCcchHhhhccCCcEEeCCCCHHHHhcCcccCeEEecCCchHHHHHHHcCCCEEeCCcccchHHHHHHHHHH
Confidence 10 123469999999999999999999999999999999999999999999999999999999999999999999996 4
Q ss_pred cCeEEEeeccCCCCcccHHHHHHHHHHHhcc--cchHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHhccc
Q 011765 398 KQIVELIPRDEGDGFFTRNSVAESLRLVLVE--EKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLKNHRC 467 (478)
Q Consensus 398 ~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~--~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 467 (478)
.|+|+.+...+ .+.++.++|+++|+++|++ ++.+.+|++++++++.+++.|++.++++.+++.+.++.+
T Consensus 378 ~g~gv~~~~~~-~~~~~~e~i~~av~~vm~~~~~~g~~~r~~a~~~~~~~~~~GSS~~~l~~lv~~~~~~~~ 448 (453)
T PLN02764 378 LKVSVEVAREE-TGWFSKESLRDAINSVMKRDSEIGNLVKKNHTKWRETLASPGLLTGYVDNFIESLQDLVS 448 (453)
T ss_pred hceEEEecccc-CCccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcc
Confidence 79999885321 1238999999999999974 335679999999999999999999999999999987654
|
|
| >PLN00414 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-63 Score=494.07 Aligned_cols=439 Identities=31% Similarity=0.553 Sum_probs=335.9
Q ss_pred CCccEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCCCCCCCCccccCCC
Q 011765 4 NSKLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVDNLRENAEATIDL 83 (478)
Q Consensus 4 ~~~~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~~~~~ 83 (478)
+++.||+++|+|++||++|++.||+.|+++|++|||++++.+...+...+ ...+.+.|..+++|..++++.+.....+.
T Consensus 2 ~~~~HVvlvPfpaqGHi~PmL~LAk~Las~G~~VT~vtt~~~~~~i~~~~-~~~~~i~~~~i~lP~~dGLP~g~e~~~~l 80 (446)
T PLN00414 2 GSKFHAFMYPWFGFGHMIPYLHLANKLAEKGHRVTFFLPKKAHKQLQPLN-LFPDSIVFEPLTLPPVDGLPFGAETASDL 80 (446)
T ss_pred CCCCEEEEecCcccchHHHHHHHHHHHHhCCCEEEEEeCCchhhhhcccc-cCCCceEEEEecCCCcCCCCCcccccccc
Confidence 34789999999999999999999999999999999999998766554432 11234888888777666787765433333
Q ss_pred ChhHHHHHHHHHhhhhHHHHHHHhhcCCCEEEEcCCcccHHHHHHHhCCCeEEEecchHHHHHhhccccccccccCCCCC
Q 011765 84 PYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAAYWLPARARELGIPSGFFSIFTAATLGYFGPSSVLINDSGDHLK 163 (478)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (478)
.......+......+.+.+.++++..+|||||+|. ++|+..+|+++|||++.|+++++..+..+.++. ...
T Consensus 81 ~~~~~~~~~~a~~~l~~~l~~~L~~~~p~cVV~D~-~~wa~~vA~~lgIP~~~F~~~~a~~~~~~~~~~--~~~------ 151 (446)
T PLN00414 81 PNSTKKPIFDAMDLLRDQIEAKVRALKPDLIFFDF-VHWVPEMAKEFGIKSVNYQIISAACVAMVLAPR--AEL------ 151 (446)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECC-chhHHHHHHHhCCCEEEEecHHHHHHHHHhCcH--hhc------
Confidence 33334455666667788888888888899999994 889999999999999999999999888776642 000
Q ss_pred CCCcccCCCcccccccccccchhhhhhhhhhhcCCcccchhhhhhhccccCCcEEEEcCcCccChHHHHHHHhhcCCCee
Q 011765 164 TPEDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLHRKPVI 243 (478)
Q Consensus 164 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~~~~~~~~~~ 243 (478)
..++..+|... +.++..... +...+.. ......+......+++++++|||++||+..++.++..++++++
T Consensus 152 -----~~~~pg~p~~~-~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~v~ 221 (446)
T PLN00414 152 -----GFPPPDYPLSK-VALRGHDAN-VCSLFAN---SHELFGLITKGLKNCDVVSIRTCVELEGNLCDFIERQCQRKVL 221 (446)
T ss_pred -----CCCCCCCCCCc-CcCchhhcc-cchhhcc---cHHHHHHHHHhhccCCEEEEechHHHHHHHHHHHHHhcCCCeE
Confidence 01112222110 001111100 0000110 1112223334566789999999999999999998886666799
Q ss_pred eeccCCCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccCCCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCC
Q 011765 244 PVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELSKLPFFWVLKKRLGQADTE 323 (478)
Q Consensus 244 ~vGp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~ 323 (478)
.|||+........ .....+++.+|||.++++++|||||||....+.+++.+++.+|+.++.+|+|++...... .+.
T Consensus 222 ~VGPl~~~~~~~~---~~~~~~~~~~WLD~q~~~sVvyvsfGS~~~~~~~q~~e~a~gL~~s~~~Flwvvr~~~~~-~~~ 297 (446)
T PLN00414 222 LTGPMLPEPQNKS---GKPLEDRWNHWLNGFEPGSVVFCAFGTQFFFEKDQFQEFCLGMELTGLPFLIAVMPPKGS-STV 297 (446)
T ss_pred EEcccCCCccccc---CcccHHHHHHHHhcCCCCceEEEeecccccCCHHHHHHHHHHHHHcCCCeEEEEecCCCc-ccc
Confidence 9999974321100 012235699999999999999999999999999999999999999999999999863221 002
Q ss_pred CCCCChhhhhhcCCCcEEEeccCChhhhhcCCCceeeeeccChhhHHHHHHhCCcEeccccccchhhHHHHHh-hcCeEE
Q 011765 324 PIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQGLNAKLLE-EKQIVE 402 (478)
Q Consensus 324 ~~~~p~~~~~~~~~~n~~~~~~vpq~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~-~~g~G~ 402 (478)
...+|++|+++.+.+++++.+|+||.+||+|+++++|||||||||++||+++|||||++|++.||+.||++++ +.|+|+
T Consensus 298 ~~~lp~~f~~r~~~~g~vv~~w~PQ~~vL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~ 377 (446)
T PLN00414 298 QEALPEGFEERVKGRGIVWEGWVEQPLILSHPSVGCFVNHCGFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSV 377 (446)
T ss_pred hhhCChhHHHHhcCCCeEEeccCCHHHHhcCCccceEEecCchhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEE
Confidence 3468999999999999999999999999999999999999999999999999999999999999999999996 579999
Q ss_pred EeeccCCCCcccHHHHHHHHHHHhcc--cchHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHhccc
Q 011765 403 LIPRDEGDGFFTRNSVAESLRLVLVE--EKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLKNHRC 467 (478)
Q Consensus 403 ~l~~~~~~~~~~~~~l~~~i~~ll~~--~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 467 (478)
.+...+ ++.+++++|+++|+++|.+ ++.+++|++++++++.+.+.+|+...++.+++.+++.+.
T Consensus 378 ~~~~~~-~~~~~~~~i~~~v~~~m~~~~e~g~~~r~~a~~~~~~~~~~gg~ss~l~~~v~~~~~~~~ 443 (446)
T PLN00414 378 KVQRED-SGWFSKESLRDTVKSVMDKDSEIGNLVKRNHKKLKETLVSPGLLSGYADKFVEALENEVN 443 (446)
T ss_pred Eecccc-CCccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhcc
Confidence 996432 3458999999999999973 234679999999999998888855668889988866544
|
|
| >PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-63 Score=492.57 Aligned_cols=455 Identities=26% Similarity=0.397 Sum_probs=337.8
Q ss_pred CCccEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCCCCCCCCccccCCC
Q 011765 4 NSKLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVDNLRENAEATIDL 83 (478)
Q Consensus 4 ~~~~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~~~~~ 83 (478)
.+++||+++|+|++||++|++.||+.|+.+|+.|||++++.+...+.....+ .+.++++.+|+|...+++++.....+.
T Consensus 7 ~~~~HVvl~PfpaqGHi~P~l~LAk~La~~G~~VTfv~T~~n~~~~~~~~~~-~~~i~~~~lp~P~~~~lPdG~~~~~~~ 85 (477)
T PLN02863 7 PAGTHVLVFPFPAQGHMIPLLDLTHRLALRGLTITVLVTPKNLPFLNPLLSK-HPSIETLVLPFPSHPSIPSGVENVKDL 85 (477)
T ss_pred CCCCEEEEecCcccchHHHHHHHHHHHHhCCCEEEEEeCCCcHHHHhhhccc-CCCeeEEeCCCCCcCCCCCCCcChhhc
Confidence 4589999999999999999999999999999999999999887655432211 135889899887767788776554444
Q ss_pred ChhHHHHHHHHHhhhhHHHHHHHhh--cCCCEEEEcCCcccHHHHHHHhCCCeEEEecchHHHHHhhccccccccccCCC
Q 011765 84 PYDEVKYLKQSFDCLEEPMAKLLQS--LAPDWLLFDFAAYWLPARARELGIPSGFFSIFTAATLGYFGPSSVLINDSGDH 161 (478)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~l~~ll~~--~~pD~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (478)
..+....+......+.+.+.+++++ .+|+|||+|.+.+|+..+|+++|||++.||+++++.+..+++.... .....
T Consensus 86 ~~~~~~~~~~a~~~~~~~~~~~l~~~~~~p~cvI~D~f~~Wa~dVA~e~GIP~~~F~t~sA~~~~~~~~~~~~--~~~~~ 163 (477)
T PLN02863 86 PPSGFPLMIHALGELYAPLLSWFRSHPSPPVAIISDMFLGWTQNLACQLGIRRFVFSPSGAMALSIMYSLWRE--MPTKI 163 (477)
T ss_pred chhhHHHHHHHHHHhHHHHHHHHHhCCCCCeEEEEcCchHhHHHHHHHcCCCEEEEeccCHHHHHHHHHHhhc--ccccc
Confidence 4344455666666677777777776 3579999999999999999999999999999999999887765311 00000
Q ss_pred CCCCCcccCCCcccccccccccchhhhhhhhhhhcCCcccchhhhhhhccccCCcEEEEcCcCccChHHHHHHHhhcC-C
Q 011765 162 LKTPEDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLHR-K 240 (478)
Q Consensus 162 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~~~~~~-~ 240 (478)
............++|+.. .++...++.+.+.............+.......++++++|||++||+..++.++..+. +
T Consensus 164 ~~~~~~~~~~~~~iPg~~--~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~ 241 (477)
T PLN02863 164 NPDDQNEILSFSKIPNCP--KYPWWQISSLYRSYVEGDPAWEFIKDSFRANIASWGLVVNSFTELEGIYLEHLKKELGHD 241 (477)
T ss_pred cccccccccccCCCCCCC--CcChHhCchhhhccCccchHHHHHHHHHhhhccCCEEEEecHHHHHHHHHHHHHhhcCCC
Confidence 000000000111233211 1222222222211001111112222222234567889999999999999999988765 5
Q ss_pred CeeeeccCCCCCCCC---CCCCC--CCChhhHhhhcccCCCCceEEEEeCcccCCCHHHHHHHHHHHHhCCCCEEEEEec
Q 011765 241 PVIPVGQLPTTTGDG---DSDAE--TDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELSKLPFFWVLKK 315 (478)
Q Consensus 241 ~~~~vGp~~~~~~~~---~~~~~--~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~ 315 (478)
+++.|||+....... ..... ....+++.+||+.++++++|||||||....+.+++.+++.+|+.++.+|||+++.
T Consensus 242 ~v~~IGPL~~~~~~~~~~~~~~~~~~~~~~~~~~WLd~~~~~svVyvsfGS~~~~~~~~~~ela~gL~~~~~~flw~~~~ 321 (477)
T PLN02863 242 RVWAVGPILPLSGEKSGLMERGGPSSVSVDDVMTWLDTCEDHKVVYVCFGSQVVLTKEQMEALASGLEKSGVHFIWCVKE 321 (477)
T ss_pred CeEEeCCCcccccccccccccCCcccccHHHHHHHHhcCCCCceEEEEeeceecCCHHHHHHHHHHHHhCCCcEEEEECC
Confidence 799999997432110 00000 1134679999999988999999999999899999999999999999999999975
Q ss_pred CCCCCCCCCCCCChhhhhhcCCCcEEEeccCChhhhhcCCCceeeeeccChhhHHHHHHhCCcEeccccccchhhHHHHH
Q 011765 316 RLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQGLNAKLL 395 (478)
Q Consensus 316 ~~~~~~~~~~~~p~~~~~~~~~~n~~~~~~vpq~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v 395 (478)
.... ......+|+++.++.+.+|+++.+|+||.+||+|+++++|||||||||++||+++|||||++|++.||+.||+++
T Consensus 322 ~~~~-~~~~~~lp~~~~~r~~~~g~~v~~w~PQ~~vL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v 400 (477)
T PLN02863 322 PVNE-ESDYSNIPSGFEDRVAGRGLVIRGWAPQVAILSHRAVGAFLTHCGWNSVLEGLVAGVPMLAWPMAADQFVNASLL 400 (477)
T ss_pred Cccc-ccchhhCCHHHHHHhccCCEEecCCCCHHHHhcCCCcCeEEecCCchHHHHHHHcCCCEEeCCccccchhhHHHH
Confidence 3211 002246899999888888999999999999999999999999999999999999999999999999999999997
Q ss_pred h-hcCeEEEeeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHH----hcccCChHHHHHHHHHHHHhccc
Q 011765 396 E-EKQIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGL----FGDKGRHDRYVDNFLNYLKNHRC 467 (478)
Q Consensus 396 ~-~~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~----~~~~~~~~~~~~~i~~~~~~~~~ 467 (478)
. +.|+|+.+.... .+.++.+++.++|++++.+ +++||+||+++++. +.++|++.++++.+++.+.++.-
T Consensus 401 ~~~~gvG~~~~~~~-~~~~~~~~v~~~v~~~m~~--~~~~r~~a~~l~e~a~~Av~~gGSS~~~l~~~v~~i~~~~~ 474 (477)
T PLN02863 401 VDELKVAVRVCEGA-DTVPDSDELARVFMESVSE--NQVERERAKELRRAALDAIKERGSSVKDLDGFVKHVVELGL 474 (477)
T ss_pred HHhhceeEEeccCC-CCCcCHHHHHHHHHHHhhc--cHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHhcc
Confidence 6 569999995422 2347999999999999942 78999999999998 45778899999999999976543
|
|
| >PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-62 Score=481.91 Aligned_cols=437 Identities=25% Similarity=0.362 Sum_probs=317.1
Q ss_pred CCC-CCccEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCCCCCCCC-cc
Q 011765 1 MAD-NSKLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVDNLREN-AE 78 (478)
Q Consensus 1 ~~~-~~~~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~-~~ 78 (478)
|.. +.+.||+++|++++||++|++.||+.|+.+|+.|||++++.+..... ....++.+..+| ++++++ ..
T Consensus 1 ~~~~~~~~HVvlvPfpaqGHi~P~l~LAk~La~~G~~VT~v~T~~n~~~~~----~~~~~i~~~~ip----~glp~~~~~ 72 (451)
T PLN02410 1 MEEKPARRRVVLVPVPAQGHISPMMQLAKTLHLKGFSITIAQTKFNYFSPS----DDFTDFQFVTIP----ESLPESDFK 72 (451)
T ss_pred CCcCCCCCEEEEECCCccccHHHHHHHHHHHHcCCCEEEEEeCcccccccc----cCCCCeEEEeCC----CCCCccccc
Confidence 555 45689999999999999999999999999999999999997642111 111358899988 566653 22
Q ss_pred ccCCCChhHHHHHHHHHhhhhHHHHHHHhhc------CCCEEEEcCCcccHHHHHHHhCCCeEEEecchHHHHHhhcccc
Q 011765 79 ATIDLPYDEVKYLKQSFDCLEEPMAKLLQSL------APDWLLFDFAAYWLPARARELGIPSGFFSIFTAATLGYFGPSS 152 (478)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~------~pD~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~ 152 (478)
.. ....++......+.+.+.+++++. +++|||+|.+.+|+..+|+++|||.+.+++++++.+..+.++.
T Consensus 73 ~~-----~~~~~~~~~~~~~~~~~~~~L~~l~~~~~~p~~cVI~D~f~~Wa~dvA~~lgIP~v~F~t~~a~~~~~~~~~~ 147 (451)
T PLN02410 73 NL-----GPIEFLHKLNKECQVSFKDCLGQLVLQQGNEIACVVYDEFMYFAEAAAKEFKLPNVIFSTTSATAFVCRSVFD 147 (451)
T ss_pred cc-----CHHHHHHHHHHHhHHHHHHHHHHHHhccCCCcEEEEECCcchHHHHHHHHcCCCEEEEEccCHHHHHHHHHHH
Confidence 11 112333333334455555555442 4699999999999999999999999999999999887766543
Q ss_pred ccccccCCCCCCCCcccCCCcccccccccccchhhhhhhhhhhcCCcccchhhhhhhccccCCcEEEEcCcCccChHHHH
Q 011765 153 VLINDSGDHLKTPEDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLK 232 (478)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~ 232 (478)
.+...+...+..... .+....+|... .++...++.... .............. ...+++++++|||++||++.++
T Consensus 148 ~~~~~~~~~~~~~~~-~~~~~~iPg~~--~~~~~dlp~~~~--~~~~~~~~~~~~~~-~~~~~~~vlvNTf~eLE~~~~~ 221 (451)
T PLN02410 148 KLYANNVLAPLKEPK-GQQNELVPEFH--PLRCKDFPVSHW--ASLESIMELYRNTV-DKRTASSVIINTASCLESSSLS 221 (451)
T ss_pred HHHhccCCCCccccc-cCccccCCCCC--CCChHHCcchhc--CCcHHHHHHHHHHh-hcccCCEEEEeChHHhhHHHHH
Confidence 222111100100000 00011222211 011111111100 00001111111111 3467899999999999999999
Q ss_pred HHHhhcCCCeeeeccCCCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccCCCHHHHHHHHHHHHhCCCCEEEE
Q 011765 233 LLEQLHRKPVIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELSKLPFFWV 312 (478)
Q Consensus 233 ~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~ 312 (478)
+++...++++++|||+......... .....+++.+||+.++++++|||||||....+.+++.+++.+|+.++.+|+|+
T Consensus 222 ~l~~~~~~~v~~vGpl~~~~~~~~~--~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gLe~s~~~FlWv 299 (451)
T PLN02410 222 RLQQQLQIPVYPIGPLHLVASAPTS--LLEENKSCIEWLNKQKKNSVIFVSLGSLALMEINEVMETASGLDSSNQQFLWV 299 (451)
T ss_pred HHHhccCCCEEEecccccccCCCcc--ccccchHHHHHHHhCCCCcEEEEEccccccCCHHHHHHHHHHHHhcCCCeEEE
Confidence 9988777789999999754221100 01223568999999988999999999999999999999999999999999999
Q ss_pred EecCCCCCCCCCCCCChhhhhhcCCCcEEEeccCChhhhhcCCCceeeeeccChhhHHHHHHhCCcEeccccccchhhHH
Q 011765 313 LKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQGLNA 392 (478)
Q Consensus 313 ~~~~~~~~~~~~~~~p~~~~~~~~~~n~~~~~~vpq~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na 392 (478)
++.......+....+|++|+++...+ .++.+|+||.+||+|+++++|||||||||++||+++|||||++|++.||+.||
T Consensus 300 ~r~~~~~~~~~~~~lp~~f~er~~~~-g~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na 378 (451)
T PLN02410 300 IRPGSVRGSEWIESLPKEFSKIISGR-GYIVKWAPQKEVLSHPAVGGFWSHCGWNSTLESIGEGVPMICKPFSSDQKVNA 378 (451)
T ss_pred EccCcccccchhhcCChhHHHhccCC-eEEEccCCHHHHhCCCccCeeeecCchhHHHHHHHcCCCEEeccccccCHHHH
Confidence 98432100001234899999988654 46669999999999999999999999999999999999999999999999999
Q ss_pred HHHhhc-CeEEEeeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhc----ccCChHHHHHHHHHHHHh
Q 011765 393 KLLEEK-QIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFG----DKGRHDRYVDNFLNYLKN 464 (478)
Q Consensus 393 ~~v~~~-g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~----~~~~~~~~~~~i~~~~~~ 464 (478)
+++++. |+|+.+. .. +++++|+++|+++|.++++++||+++++|++.++ ++|++.++++.+++.++.
T Consensus 379 ~~~~~~~~~G~~~~-~~----~~~~~v~~av~~lm~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~fv~~~~~ 450 (451)
T PLN02410 379 RYLECVWKIGIQVE-GD----LDRGAVERAVKRLMVEEEGEEMRKRAISLKEQLRASVISGGSSHNSLEEFVHFMRT 450 (451)
T ss_pred HHHHHHhCeeEEeC-Cc----ccHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHh
Confidence 999887 9999997 34 8999999999999985556789999999999976 667789999999998764
|
|
| >PLN02173 UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-61 Score=477.88 Aligned_cols=422 Identities=24% Similarity=0.384 Sum_probs=317.2
Q ss_pred ccEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCCCCCCCC-ccccCCCC
Q 011765 6 KLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVDNLREN-AEATIDLP 84 (478)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~-~~~~~~~~ 84 (478)
+.||+++|+|++||++|++.||+.|+.+|+.|||++++.+...+... ..+.+.++.+| ++++++ .... +
T Consensus 5 ~~hvv~~P~paqGHi~P~l~lAk~La~~G~~vT~v~t~~~~~~~~~~---~~~~i~~~~ip----dglp~~~~~~~-~-- 74 (449)
T PLN02173 5 RGHVLAVPFPSQGHITPIRQFCKRLHSKGFKTTHTLTTFIFNTIHLD---PSSPISIATIS----DGYDQGGFSSA-G-- 74 (449)
T ss_pred CcEEEEecCcccccHHHHHHHHHHHHcCCCEEEEEECCchhhhcccC---CCCCEEEEEcC----CCCCCcccccc-c--
Confidence 57999999999999999999999999999999999999876544321 12359999998 677653 2221 1
Q ss_pred hhHHHHHHHHHhhhhHHHHHHHhhc----CC-CEEEEcCCcccHHHHHHHhCCCeEEEecchHHHHHhhccccccccccC
Q 011765 85 YDEVKYLKQSFDCLEEPMAKLLQSL----AP-DWLLFDFAAYWLPARARELGIPSGFFSIFTAATLGYFGPSSVLINDSG 159 (478)
Q Consensus 85 ~~~~~~~~~~~~~~~~~l~~ll~~~----~p-D~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~~~~~ 159 (478)
....++......+.+.+.+++++. +| ||||+|.+.+|+..+|+++|||.+.+++++++.+..+++.. + ..
T Consensus 75 -~~~~~~~~~~~~~~~~~~~~l~~~~~~~~Pv~cvV~D~f~~Wa~dVA~elgIP~v~F~~~~a~~~~~~~~~~-~-~~-- 149 (449)
T PLN02173 75 -SVPEYLQNFKTFGSKTVADIIRKHQSTDNPITCIVYDSFMPWALDLAREFGLAAAPFFTQSCAVNYINYLSY-I-NN-- 149 (449)
T ss_pred -CHHHHHHHHHHhhhHHHHHHHHHhhccCCCceEEEECCcchhHHHHHHHhCCCEEEEechHHHHHHHHHhHH-h-cc--
Confidence 222445545445667777777653 56 99999999999999999999999999999888876655432 1 00
Q ss_pred CCCCCCCcccCCCcccccccccccchhhhhhhhhhhcCCcccchhhhhhhccccCCcEEEEcCcCccChHHHHHHHhhcC
Q 011765 160 DHLKTPEDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLHR 239 (478)
Q Consensus 160 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~~~~~~ 239 (478)
.....+.+++|. ++...++.+..........+...........+++++++|||++||++.++.++.. +
T Consensus 150 ------~~~~~~~pg~p~-----l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~-~ 217 (449)
T PLN02173 150 ------GSLTLPIKDLPL-----LELQDLPTFVTPTGSHLAYFEMVLQQFTNFDKADFVLVNSFHDLDLHENELLSKV-C 217 (449)
T ss_pred ------CCccCCCCCCCC-----CChhhCChhhcCCCCchHHHHHHHHHHhhhccCCEEEEeCHHHhhHHHHHHHHhc-C
Confidence 000011112221 2222222211100000011222223334566789999999999999999888653 3
Q ss_pred CCeeeeccCCCCCC----CCCCCC-C-----CCChhhHhhhcccCCCCceEEEEeCcccCCCHHHHHHHHHHHHhCCCCE
Q 011765 240 KPVIPVGQLPTTTG----DGDSDA-E-----TDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELSKLPF 309 (478)
Q Consensus 240 ~~~~~vGp~~~~~~----~~~~~~-~-----~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~ 309 (478)
+++.|||+..... ...... . ....+++.+||+.++++++|||||||....+.+++.+++.+| ++.+|
T Consensus 218 -~v~~VGPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~WLd~~~~~svvyvsfGS~~~~~~~~~~ela~gL--s~~~f 294 (449)
T PLN02173 218 -PVLTIGPTVPSMYLDQQIKSDNDYDLNLFDLKEAALCTDWLDKRPQGSVVYIAFGSMAKLSSEQMEEIASAI--SNFSY 294 (449)
T ss_pred -CeeEEcccCchhhccccccccccccccccccccchHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHh--cCCCE
Confidence 5999999974210 000000 0 012346999999999899999999999999999999999999 78889
Q ss_pred EEEEecCCCCCCCCCCCCChhhhhhcCCCcEEEeccCChhhhhcCCCceeeeeccChhhHHHHHHhCCcEeccccccchh
Q 011765 310 FWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQG 389 (478)
Q Consensus 310 i~~~~~~~~~~~~~~~~~p~~~~~~~~~~n~~~~~~vpq~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~ 389 (478)
+|+++.. ....+|+++.++...+|+++.+|+||.+||+|+++++|||||||||++||+++|||||++|++.||+
T Consensus 295 lWvvr~~------~~~~lp~~~~~~~~~~~~~i~~W~PQ~~iL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ~ 368 (449)
T PLN02173 295 LWVVRAS------EESKLPPGFLETVDKDKSLVLKWSPQLQVLSNKAIGCFMTHCGWNSTMEGLSLGVPMVAMPQWTDQP 368 (449)
T ss_pred EEEEecc------chhcccchHHHhhcCCceEEeCCCCHHHHhCCCccceEEecCccchHHHHHHcCCCEEecCchhcch
Confidence 9999853 2345888888888778899889999999999999999999999999999999999999999999999
Q ss_pred hHHHHHhhc-CeEEEeeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhc----ccCChHHHHHHHHHHHH
Q 011765 390 LNAKLLEEK-QIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFG----DKGRHDRYVDNFLNYLK 463 (478)
Q Consensus 390 ~na~~v~~~-g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~----~~~~~~~~~~~i~~~~~ 463 (478)
.||+++++. |+|+.+...++++.++.++|+++|+++|.+++.+++|+||++++++.+ ++|++.++++.+++.+.
T Consensus 369 ~Na~~v~~~~g~Gv~v~~~~~~~~~~~e~v~~av~~vm~~~~~~~~r~~a~~~~~~a~~Av~~gGSS~~~l~~~v~~~~ 447 (449)
T PLN02173 369 MNAKYIQDVWKVGVRVKAEKESGIAKREEIEFSIKEVMEGEKSKEMKENAGKWRDLAVKSLSEGGSTDININTFVSKIQ 447 (449)
T ss_pred HHHHHHHHHhCceEEEeecccCCcccHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHhc
Confidence 999999986 999998754434567999999999999986666899999999999977 78888999999998774
|
|
| >PLN02992 coniferyl-alcohol glucosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-61 Score=475.93 Aligned_cols=437 Identities=28% Similarity=0.417 Sum_probs=322.6
Q ss_pred ccEEEEecCCCccCHHHHHHHHHHHH-hCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCCCCCCCCccccCCCC
Q 011765 6 KLQIAMFPWLAFGHMIPWLELAKLIA-QKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVDNLRENAEATIDLP 84 (478)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~La~~L~-~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~~~~~~ 84 (478)
+.||+++|+|++||++|++.||+.|+ .+|++|||++++.+...+...... .+.+.++.+|++..++++....
T Consensus 5 ~pHVvl~P~paqGHi~P~l~LAk~La~~~g~~vT~v~t~~n~~~~~~~~~~-~~~i~~~~lp~p~~~glp~~~~------ 77 (481)
T PLN02992 5 KPHAAMFSSPGMGHVIPVIELGKRLSANHGFHVTVFVLETDAASAQSKFLN-STGVDIVGLPSPDISGLVDPSA------ 77 (481)
T ss_pred CcEEEEeCCcccchHHHHHHHHHHHHhCCCcEEEEEeCCCchhhhhhcccc-CCCceEEECCCccccCCCCCCc------
Confidence 57999999999999999999999998 789999999999775443221100 1248899998766555542111
Q ss_pred hhHHHHHHHHHhhhhHHHHHHHhhc--CCCEEEEcCCcccHHHHHHHhCCCeEEEecchHHHHHhhccccccccccCCCC
Q 011765 85 YDEVKYLKQSFDCLEEPMAKLLQSL--APDWLLFDFAAYWLPARARELGIPSGFFSIFTAATLGYFGPSSVLINDSGDHL 162 (478)
Q Consensus 85 ~~~~~~~~~~~~~~~~~l~~ll~~~--~pD~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (478)
+....+......+.+.+++++++. +|+|||+|.+++|+..+|+++|||++.++++++..++.+.+...+...... +
T Consensus 78 -~~~~~~~~~~~~~~~~~~~~l~~~~~~p~cvV~D~f~~Wa~dVA~elgIP~v~F~t~sA~~~~~~~~~~~~~~~~~~-~ 155 (481)
T PLN02992 78 -HVVTKIGVIMREAVPTLRSKIAEMHQKPTALIVDLFGTDALCLGGEFNMLTYIFIASNARFLGVSIYYPTLDKDIKE-E 155 (481)
T ss_pred -cHHHHHHHHHHHhHHHHHHHHHhcCCCCeEEEECCcchhHHHHHHHcCCCEEEEecCcHHHHHHHHhhhhhcccccc-c
Confidence 111233333445667777777664 689999999999999999999999999999999887765443211111000 0
Q ss_pred CCCCcccCCCcccccccccccchhhhhhhhhhhcCCcccchhhhhhhccccCCcEEEEcCcCccChHHHHHHHhh--c--
Q 011765 163 KTPEDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQL--H-- 238 (478)
Q Consensus 163 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~~~~--~-- 238 (478)
. .....+..+|+... ++...+.... .......+....+.......++++++|||++||+..+++++.. +
T Consensus 156 ~---~~~~~~~~iPg~~~--l~~~dlp~~~--~~~~~~~~~~~~~~~~~~~~a~gvlvNTf~eLE~~~l~~l~~~~~~~~ 228 (481)
T PLN02992 156 H---TVQRKPLAMPGCEP--VRFEDTLDAY--LVPDEPVYRDFVRHGLAYPKADGILVNTWEEMEPKSLKSLQDPKLLGR 228 (481)
T ss_pred c---ccCCCCcccCCCCc--cCHHHhhHhh--cCCCcHHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHhhcccccc
Confidence 0 00001122332211 2222222111 1111112333334444566789999999999999999988652 1
Q ss_pred --CCCeeeeccCCCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccCCCHHHHHHHHHHHHhCCCCEEEEEecC
Q 011765 239 --RKPVIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELSKLPFFWVLKKR 316 (478)
Q Consensus 239 --~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~ 316 (478)
.++++.|||+...... ...++++.+||+.++++++|||||||...++.+++.+++.+|+.++.+|||+++..
T Consensus 229 ~~~~~v~~VGPl~~~~~~------~~~~~~c~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flW~~r~~ 302 (481)
T PLN02992 229 VARVPVYPIGPLCRPIQS------SKTDHPVLDWLNKQPNESVLYISFGSGGSLSAKQLTELAWGLEMSQQRFVWVVRPP 302 (481)
T ss_pred ccCCceEEecCccCCcCC------CcchHHHHHHHHcCCCCceEEEeecccccCCHHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 2469999999753211 22345799999999888999999999999999999999999999999999999742
Q ss_pred CCC-----------C--CC-CCCCCChhhhhhcCCCcEEEeccCChhhhhcCCCceeeeeccChhhHHHHHHhCCcEecc
Q 011765 317 LGQ-----------A--DT-EPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVL 382 (478)
Q Consensus 317 ~~~-----------~--~~-~~~~~p~~~~~~~~~~n~~~~~~vpq~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~ 382 (478)
... + .+ ....+|++|.++.+.+|+++.+|+||.+||+|+++++|||||||||++||+++|||||++
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~f~eR~~~rg~vv~~W~PQ~~iL~h~~vg~FitH~G~nS~~Eal~~GVP~l~~ 382 (481)
T PLN02992 303 VDGSACSAYFSANGGETRDNTPEYLPEGFVSRTHDRGFVVPSWAPQAEILAHQAVGGFLTHCGWSSTLESVVGGVPMIAW 382 (481)
T ss_pred cccccccccccCcccccccchhhhCCHHHHHHhcCCCEEEeecCCHHHHhCCcccCeeEecCchhHHHHHHHcCCCEEec
Confidence 100 0 00 123589999999999999999999999999999999999999999999999999999999
Q ss_pred ccccchhhHHHHHh-hcCeEEEeeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhc------ccCChHHHH
Q 011765 383 TCYADQGLNAKLLE-EKQIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFG------DKGRHDRYV 455 (478)
Q Consensus 383 P~~~DQ~~na~~v~-~~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~------~~~~~~~~~ 455 (478)
|++.||+.||++++ ++|+|+.++.. ++.++.++|+++|++++.+++.+++|++++++++..+ ++|++.+++
T Consensus 383 P~~~DQ~~na~~~~~~~g~gv~~~~~--~~~~~~~~l~~av~~vm~~~~g~~~r~~a~~~~~~a~~Av~~~~GGSS~~~l 460 (481)
T PLN02992 383 PLFAEQNMNAALLSDELGIAVRSDDP--KEVISRSKIEALVRKVMVEEEGEEMRRKVKKLRDTAEMSLSIDGGGVAHESL 460 (481)
T ss_pred CccchhHHHHHHHHHHhCeeEEecCC--CCcccHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhcCCCCCchHHHH
Confidence 99999999999995 88999999752 1248999999999999986556799999999999865 256678888
Q ss_pred HHHHHHHHhcc
Q 011765 456 DNFLNYLKNHR 466 (478)
Q Consensus 456 ~~i~~~~~~~~ 466 (478)
+.+++.+.+..
T Consensus 461 ~~~v~~~~~~~ 471 (481)
T PLN02992 461 CRVTKECQRFL 471 (481)
T ss_pred HHHHHHHHHHH
Confidence 88888776543
|
|
| >PLN02555 limonoid glucosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-61 Score=475.32 Aligned_cols=449 Identities=25% Similarity=0.333 Sum_probs=321.9
Q ss_pred CCC-CCccEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCC---CC-----CCCCeEEEEecCCCCC
Q 011765 1 MAD-NSKLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLP---QN-----LASMIQFVKISLPHVD 71 (478)
Q Consensus 1 ~~~-~~~~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g---~~-----~~~~i~~~~i~~~~~~ 71 (478)
|.+ +.+.||+++|+|++||++|++.||+.|+.+|..|||++++.+...+.+.. .. ....++|..+| +
T Consensus 1 ~~~~~~~~HVv~~PfpaqGHi~Pml~lA~~La~~G~~vT~v~T~~~~~~~~~a~~~~~~~~~~~~~~~i~~~~~p----d 76 (480)
T PLN02555 1 MESESSLVHVMLVSFPGQGHVNPLLRLGKLLASKGLLVTFVTTESWGKKMRQANKIQDGVLKPVGDGFIRFEFFE----D 76 (480)
T ss_pred CCCCCCCCEEEEECCcccccHHHHHHHHHHHHhCCCeEEEEeccchhhhhhccccccccccccCCCCeEEEeeCC----C
Confidence 777 55799999999999999999999999999999999999997665443210 00 01125555555 5
Q ss_pred CCCCCccccCCCChhHHHHHHHHHhhhhHHHHHHHhhc----CC-CEEEEcCCcccHHHHHHHhCCCeEEEecchHHHHH
Q 011765 72 NLRENAEATIDLPYDEVKYLKQSFDCLEEPMAKLLQSL----AP-DWLLFDFAAYWLPARARELGIPSGFFSIFTAATLG 146 (478)
Q Consensus 72 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~----~p-D~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~~~~~ 146 (478)
+++++.... .+...++......+.+.+.+++++. +| +|||+|.+.+|+..+|+++|||.+++++++++.+.
T Consensus 77 glp~~~~~~----~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~pv~ciV~D~~~~wa~~vA~~~gIP~~~F~t~~a~~~~ 152 (480)
T PLN02555 77 GWAEDDPRR----QDLDLYLPQLELVGKREIPNLVKRYAEQGRPVSCLINNPFIPWVCDVAEELGIPSAVLWVQSCACFS 152 (480)
T ss_pred CCCCCcccc----cCHHHHHHHHHHhhhHHHHHHHHHHhccCCCceEEEECCcchHHHHHHHHcCCCeEEeecccHHHHH
Confidence 666543321 1222344444334566666666542 45 99999999999999999999999999999999888
Q ss_pred hhccccccccccCCCCCCCCcccCCCcccccccccccchhhhhhhhhhhcCCcccchhhhhhhccccCCcEEEEcCcCcc
Q 011765 147 YFGPSSVLINDSGDHLKTPEDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEF 226 (478)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~l 226 (478)
.+.+.. .. ..+ .........+..+|+.. .++..+++.+..........+....+......+++++++|||++|
T Consensus 153 ~~~~~~--~~--~~~-~~~~~~~~~~~~iPglp--~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~a~~vlvNTf~eL 225 (480)
T PLN02555 153 AYYHYY--HG--LVP-FPTETEPEIDVQLPCMP--LLKYDEIPSFLHPSSPYPFLRRAILGQYKNLDKPFCILIDTFQEL 225 (480)
T ss_pred HHHHHh--hc--CCC-cccccCCCceeecCCCC--CcCHhhCcccccCCCCchHHHHHHHHHHHhcccCCEEEEEchHHH
Confidence 766542 10 000 00000000011123211 133333332221000111112223333345667899999999999
Q ss_pred ChHHHHHHHhhcCCCeeeeccCCCCCCCC-CCC-CC-CCChhhHhhhcccCCCCceEEEEeCcccCCCHHHHHHHHHHHH
Q 011765 227 EPEWLKLLEQLHRKPVIPVGQLPTTTGDG-DSD-AE-TDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLE 303 (478)
Q Consensus 227 e~~~~~~~~~~~~~~~~~vGp~~~~~~~~-~~~-~~-~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~ 303 (478)
|+..++.+.... + ++.|||+....... ... .. ...++++.+||+.++++++|||||||....+.+++.+++.+|+
T Consensus 226 E~~~~~~l~~~~-~-v~~iGPl~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~~l~ 303 (480)
T PLN02555 226 EKEIIDYMSKLC-P-IKPVGPLFKMAKTPNSDVKGDISKPADDCIEWLDSKPPSSVVYISFGTVVYLKQEQIDEIAYGVL 303 (480)
T ss_pred hHHHHHHHhhCC-C-EEEeCcccCccccccccccccccccchhHHHHHhCCCCCceeEEEeccccCCCHHHHHHHHHHHH
Confidence 999998886644 3 99999997532110 000 00 2234679999999988889999999999999999999999999
Q ss_pred hCCCCEEEEEecCCCCCCCCCCCCChhhhhhcCCCcEEEeccCChhhhhcCCCceeeeeccChhhHHHHHHhCCcEeccc
Q 011765 304 LSKLPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLT 383 (478)
Q Consensus 304 ~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~n~~~~~~vpq~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P 383 (478)
.++++|||+++............+|+++.++.+ +|.++.+|+||.+||+|+++++|||||||||++||+++|||||++|
T Consensus 304 ~~~~~flW~~~~~~~~~~~~~~~lp~~~~~~~~-~~g~v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Eai~~GVP~l~~P 382 (480)
T PLN02555 304 NSGVSFLWVMRPPHKDSGVEPHVLPEEFLEKAG-DKGKIVQWCPQEKVLAHPSVACFVTHCGWNSTMEALSSGVPVVCFP 382 (480)
T ss_pred hcCCeEEEEEecCcccccchhhcCChhhhhhcC-CceEEEecCCHHHHhCCCccCeEEecCCcchHHHHHHcCCCEEeCC
Confidence 999999999974311000022468888887764 4567779999999999999999999999999999999999999999
Q ss_pred cccchhhHHHHHhhc-CeEEEeeccC-CCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhc----ccCChHHHHHH
Q 011765 384 CYADQGLNAKLLEEK-QIVELIPRDE-GDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFG----DKGRHDRYVDN 457 (478)
Q Consensus 384 ~~~DQ~~na~~v~~~-g~G~~l~~~~-~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~----~~~~~~~~~~~ 457 (478)
++.||+.||+++++. |+|+.+.... ..+.++.++|+++|++++++++++++|+||++|++..+ ++|++.++++.
T Consensus 383 ~~~DQ~~Na~~~~~~~gvGv~l~~~~~~~~~v~~~~v~~~v~~vm~~~~g~~~r~ra~~l~~~a~~A~~egGSS~~~l~~ 462 (480)
T PLN02555 383 QWGDQVTDAVYLVDVFKTGVRLCRGEAENKLITREEVAECLLEATVGEKAAELKQNALKWKEEAEAAVAEGGSSDRNFQE 462 (480)
T ss_pred CccccHHHHHHHHHHhCceEEccCCccccCcCcHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHH
Confidence 999999999999887 9999995311 12348999999999999986667899999999999954 67888999999
Q ss_pred HHHHHHhccc
Q 011765 458 FLNYLKNHRC 467 (478)
Q Consensus 458 i~~~~~~~~~ 467 (478)
+++.+.+...
T Consensus 463 ~v~~i~~~~~ 472 (480)
T PLN02555 463 FVDKLVRKSV 472 (480)
T ss_pred HHHHHHhccc
Confidence 9999976643
|
|
| >PLN02210 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-60 Score=474.63 Aligned_cols=435 Identities=24% Similarity=0.353 Sum_probs=315.2
Q ss_pred CCC--CCccEEEEecCCCccCHHHHHHHHHH--HHhCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCCCCCCCC
Q 011765 1 MAD--NSKLQIAMFPWLAFGHMIPWLELAKL--IAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVDNLREN 76 (478)
Q Consensus 1 ~~~--~~~~~il~~~~~~~gH~~p~l~La~~--L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~ 76 (478)
|++ +++.||+++|+|++||++|++.||+. |++||+.|||++++.+...+...+. ....+++..+| ++++++
T Consensus 1 ~~~~~~~~~hvv~~P~pa~GHi~P~l~La~~L~L~~~G~~VT~v~t~~~~~~~~~~~~-~~~~~~~~~~~----~glp~~ 75 (456)
T PLN02210 1 MGSSEGQETHVLMVTLAFQGHINPMLKLAKHLSLSSKNLHFTLATTEQARDLLSTVEK-PRRPVDLVFFS----DGLPKD 75 (456)
T ss_pred CCCcCCCCCEEEEeCCcccccHHHHHHHHHHHHhhcCCcEEEEEeccchhhhhccccC-CCCceEEEECC----CCCCCC
Confidence 555 44689999999999999999999999 5699999999999988766543321 12346666665 566654
Q ss_pred ccccCCCChhHHHHHHHHHhhhhHHHHHHHhhcCCCEEEEcCCcccHHHHHHHhCCCeEEEecchHHHHHhhcccccccc
Q 011765 77 AEATIDLPYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAAYWLPARARELGIPSGFFSIFTAATLGYFGPSSVLIN 156 (478)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~~ 156 (478)
.. . ....++......+.+.+.+++++.+|||||+|.+.+|+..+|+++|||.+.+|+..+..+..+.+....
T Consensus 76 ~~---~---~~~~~~~~~~~~~~~~l~~~l~~~~~~~vI~D~~~~w~~~vA~~lgIP~~~f~~~sa~~~~~~~~~~~~-- 147 (456)
T PLN02210 76 DP---R---APETLLKSLNKVGAKNLSKIIEEKRYSCIISSPFTPWVPAVAAAHNIPCAILWIQACGAYSVYYRYYMK-- 147 (456)
T ss_pred cc---c---CHHHHHHHHHHhhhHHHHHHHhcCCCcEEEECCcchhHHHHHHHhCCCEEEEecccHHHHHHHHhhhhc--
Confidence 32 1 112344444445567788888888899999999999999999999999999999999988876643210
Q ss_pred ccCCCCCCCCcccCCCcccccccccccchhhhhhhhhhhcCCcccc-hhhhhhhccccCCcEEEEcCcCccChHHHHHHH
Q 011765 157 DSGDHLKTPEDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNV-SHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLE 235 (478)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~~ 235 (478)
....+.. .... .+..+|... .++..++.... .......+ ....++.+....++++++|||+++|++.++.++
T Consensus 148 ~~~~~~~--~~~~-~~~~~Pgl~--~~~~~dl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~ 220 (456)
T PLN02210 148 TNSFPDL--EDLN-QTVELPALP--LLEVRDLPSFM--LPSGGAHFNNLMAEFADCLRYVKWVLVNSFYELESEIIESMA 220 (456)
T ss_pred cCCCCcc--cccC-CeeeCCCCC--CCChhhCChhh--hcCCchHHHHHHHHHHHhcccCCEEEEeCHHHHhHHHHHHHh
Confidence 0001100 0000 011123211 12222222211 11111112 122233344567899999999999999999887
Q ss_pred hhcCCCeeeeccCCCCC---CCCCC--CCC----CCChhhHhhhcccCCCCceEEEEeCcccCCCHHHHHHHHHHHHhCC
Q 011765 236 QLHRKPVIPVGQLPTTT---GDGDS--DAE----TDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELSK 306 (478)
Q Consensus 236 ~~~~~~~~~vGp~~~~~---~~~~~--~~~----~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~ 306 (478)
. . +++++|||+.... ..... ... ...+++|.+||+.++++++|||||||....+.+++.+++.+|+.++
T Consensus 221 ~-~-~~v~~VGPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~e~a~~l~~~~ 298 (456)
T PLN02210 221 D-L-KPVIPIGPLVSPFLLGDDEEETLDGKNLDMCKSDDCCMEWLDKQARSSVVYISFGSMLESLENQVETIAKALKNRG 298 (456)
T ss_pred h-c-CCEEEEcccCchhhcCcccccccccccccccccchHHHHHHhCCCCCceEEEEecccccCCHHHHHHHHHHHHhCC
Confidence 6 3 4799999997421 10000 000 1235679999999988899999999999889999999999999999
Q ss_pred CCEEEEEecCCCCCCCCCCCCChhhhhhcCCCcEEEeccCChhhhhcCCCceeeeeccChhhHHHHHHhCCcEecccccc
Q 011765 307 LPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYA 386 (478)
Q Consensus 307 ~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~n~~~~~~vpq~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~ 386 (478)
.+|||+++... ....++.+.++...++.++.+|+||.+||+|+++++|||||||||++||+++|||||++|++.
T Consensus 299 ~~flw~~~~~~------~~~~~~~~~~~~~~~~g~v~~w~PQ~~iL~h~~vg~FitH~G~nS~~Eai~~GVP~v~~P~~~ 372 (456)
T PLN02210 299 VPFLWVIRPKE------KAQNVQVLQEMVKEGQGVVLEWSPQEKILSHMAISCFVTHCGWNSTIETVVAGVPVVAYPSWT 372 (456)
T ss_pred CCEEEEEeCCc------cccchhhHHhhccCCCeEEEecCCHHHHhcCcCcCeEEeeCCcccHHHHHHcCCCEEeccccc
Confidence 99999997531 112334555554323445679999999999999999999999999999999999999999999
Q ss_pred chhhHHHHHhh-cCeEEEeeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhc----ccCChHHHHHHHHHH
Q 011765 387 DQGLNAKLLEE-KQIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFG----DKGRHDRYVDNFLNY 461 (478)
Q Consensus 387 DQ~~na~~v~~-~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~----~~~~~~~~~~~i~~~ 461 (478)
||+.||+++++ +|+|+.+...+.++.+++++|+++|+++|.+++.+++|+||++|++..+ ++|++.++++.+++.
T Consensus 373 DQ~~na~~~~~~~g~G~~l~~~~~~~~~~~~~l~~av~~~m~~~~g~~~r~~a~~l~~~a~~Av~~gGSS~~~l~~~v~~ 452 (456)
T PLN02210 373 DQPIDARLLVDVFGIGVRMRNDAVDGELKVEEVERCIEAVTEGPAAADIRRRAAELKHVARLALAPGGSSARNLDLFISD 452 (456)
T ss_pred ccHHHHHHHHHHhCeEEEEeccccCCcCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence 99999999998 8999999753223458999999999999985556679999999999865 667889999999987
Q ss_pred HH
Q 011765 462 LK 463 (478)
Q Consensus 462 ~~ 463 (478)
+.
T Consensus 453 ~~ 454 (456)
T PLN02210 453 IT 454 (456)
T ss_pred Hh
Confidence 74
|
|
| >PLN03007 UDP-glucosyltransferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-61 Score=481.83 Aligned_cols=454 Identities=27% Similarity=0.379 Sum_probs=325.2
Q ss_pred CCCCCccEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCC---CC--CeEEEEecCCCC-CCCC
Q 011765 1 MADNSKLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNL---AS--MIQFVKISLPHV-DNLR 74 (478)
Q Consensus 1 ~~~~~~~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~---~~--~i~~~~i~~~~~-~~l~ 74 (478)
|+++ ++||+++|+|++||++|++.||+.|+.||++|||++++.+...++..+... .+ .+.+..+++|.. ++++
T Consensus 1 ~~~~-~~hVvlvp~pa~GHi~P~L~LAk~L~~rG~~VT~vtt~~~~~~i~~~~a~~~~~~~~~~~~~~~~~~p~~~~glP 79 (482)
T PLN03007 1 MNHE-KLHILFFPFMAHGHMIPTLDMAKLFSSRGAKSTILTTPLNAKIFEKPIEAFKNLNPGLEIDIQIFNFPCVELGLP 79 (482)
T ss_pred CCCC-CcEEEEECCCccccHHHHHHHHHHHHhCCCEEEEEECCCchhhhhhhhhhhcccCCCCcceEEEeeCCCCcCCCC
Confidence 5554 689999999999999999999999999999999999998876665443210 11 235555665543 2566
Q ss_pred CCccccCC-------CChhHHHHHHHHHhhhhHHHHHHHhhcCCCEEEEcCCcccHHHHHHHhCCCeEEEecchHHHHHh
Q 011765 75 ENAEATID-------LPYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAAYWLPARARELGIPSGFFSIFTAATLGY 147 (478)
Q Consensus 75 ~~~~~~~~-------~~~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~~~~~~ 147 (478)
++...... ........+......+.+.+.+++++.+|||||+|.+++|+..+|+++|||.++||+++++....
T Consensus 80 ~g~e~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~IV~D~~~~w~~~vA~~lgIP~v~f~~~~a~~~~~ 159 (482)
T PLN03007 80 EGCENVDFITSNNNDDSGDLFLKFLFSTKYFKDQLEKLLETTRPDCLVADMFFPWATEAAEKFGVPRLVFHGTGYFSLCA 159 (482)
T ss_pred CCcccccccccccccchHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEECCcchhHHHHHHHhCCCeEEeecccHHHHHH
Confidence 55433211 11133334445556677888888888899999999999999999999999999999998877665
Q ss_pred hccccccccccCCCCCCCCcccCCCcccccccccccchhhhhhhhhhhcCCcccchhhhhhhccccCCcEEEEcCcCccC
Q 011765 148 FGPSSVLINDSGDHLKTPEDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFE 227 (478)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le 227 (478)
+............+ ........+.+|. .+.++...+... ..............+...+++.+++||+++||
T Consensus 160 ~~~~~~~~~~~~~~---~~~~~~~~pg~p~--~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~vl~Nt~~~le 230 (482)
T PLN03007 160 SYCIRVHKPQKKVA---SSSEPFVIPDLPG--DIVITEEQINDA----DEESPMGKFMKEVRESEVKSFGVLVNSFYELE 230 (482)
T ss_pred HHHHHhcccccccC---CCCceeeCCCCCC--ccccCHHhcCCC----CCchhHHHHHHHHHhhcccCCEEEEECHHHHH
Confidence 44222000000000 0000000111111 111121111110 01100112333444556778999999999999
Q ss_pred hHHHHHHHhhcCCCeeeeccCCCCCCCC---C--CCCCCCChhhHhhhcccCCCCceEEEEeCcccCCCHHHHHHHHHHH
Q 011765 228 PEWLKLLEQLHRKPVIPVGQLPTTTGDG---D--SDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGL 302 (478)
Q Consensus 228 ~~~~~~~~~~~~~~~~~vGp~~~~~~~~---~--~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al 302 (478)
++..+.+++...+++++|||+....... . ........+++.+||+..+++++|||||||+...+.+++.+++.+|
T Consensus 231 ~~~~~~~~~~~~~~~~~VGPl~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~~~~l 310 (482)
T PLN03007 231 SAYADFYKSFVAKRAWHIGPLSLYNRGFEEKAERGKKANIDEQECLKWLDSKKPDSVIYLSFGSVASFKNEQLFEIAAGL 310 (482)
T ss_pred HHHHHHHHhccCCCEEEEccccccccccccccccCCccccchhHHHHHHhcCCCCceEEEeecCCcCCCHHHHHHHHHHH
Confidence 9988888777666799999986432110 0 0000123467999999998899999999999988899999999999
Q ss_pred HhCCCCEEEEEecCCCCCCCCCCCCChhhhhhcCCCcEEEeccCChhhhhcCCCceeeeeccChhhHHHHHHhCCcEecc
Q 011765 303 ELSKLPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVL 382 (478)
Q Consensus 303 ~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~n~~~~~~vpq~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~ 382 (478)
+.++.+|||+++..... .+....+|+++.++...+|+++.+|+||.+||+|+++++|||||||||++||+++|||||++
T Consensus 311 ~~~~~~flw~~~~~~~~-~~~~~~lp~~~~~r~~~~g~~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GVP~v~~ 389 (482)
T PLN03007 311 EGSGQNFIWVVRKNENQ-GEKEEWLPEGFEERTKGKGLIIRGWAPQVLILDHQATGGFVTHCGWNSLLEGVAAGLPMVTW 389 (482)
T ss_pred HHCCCCEEEEEecCCcc-cchhhcCCHHHHHHhccCCEEEecCCCHHHHhccCccceeeecCcchHHHHHHHcCCCeeec
Confidence 99999999999854210 00223589999999989999999999999999999999999999999999999999999999
Q ss_pred ccccchhhHHHHHhhc-CeEEEeeccC----CCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhc----ccCChHH
Q 011765 383 TCYADQGLNAKLLEEK-QIVELIPRDE----GDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFG----DKGRHDR 453 (478)
Q Consensus 383 P~~~DQ~~na~~v~~~-g~G~~l~~~~----~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~----~~~~~~~ 453 (478)
|++.||+.||+++++. ++|+.+.... +.+.++.++|+++|++++.++++++||+||+++++..+ ++|++.+
T Consensus 390 P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~l~~av~~~m~~~~~~~~r~~a~~~~~~a~~a~~~gGsS~~ 469 (482)
T PLN03007 390 PVGAEQFYNEKLVTQVLRTGVSVGAKKLVKVKGDFISREKVEKAVREVIVGEEAEERRLRAKKLAEMAKAAVEEGGSSFN 469 (482)
T ss_pred cchhhhhhhHHHHHHhhcceeEeccccccccccCcccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhCCCcHHH
Confidence 9999999999988742 4444442110 01238999999999999985545699999999999876 5677899
Q ss_pred HHHHHHHHHHhc
Q 011765 454 YVDNFLNYLKNH 465 (478)
Q Consensus 454 ~~~~i~~~~~~~ 465 (478)
+++.|++.+.+.
T Consensus 470 ~l~~~v~~~~~~ 481 (482)
T PLN03007 470 DLNKFMEELNSR 481 (482)
T ss_pred HHHHHHHHHHhc
Confidence 999999988754
|
|
| >PLN02534 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-60 Score=471.52 Aligned_cols=452 Identities=26% Similarity=0.420 Sum_probs=329.0
Q ss_pred CCccEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCC---CCCCeEEEEecCCCC-CCCCCCccc
Q 011765 4 NSKLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQN---LASMIQFVKISLPHV-DNLRENAEA 79 (478)
Q Consensus 4 ~~~~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~---~~~~i~~~~i~~~~~-~~l~~~~~~ 79 (478)
++++||+++|+|++||++|++.||+.|+.+|+.|||++++.+...+...... ....++|+.+|+|.. ++++++...
T Consensus 6 ~~~~Hvv~vPfpaqGHi~P~l~LAk~La~~G~~vT~v~t~~n~~~~~~~~~~~~~~~~~i~~~~lp~p~~~dglp~~~~~ 85 (491)
T PLN02534 6 AKQLHFVLIPLMAQGHMIPMIDMARLLAERGVIVSLVTTPQNASRFAKTIDRARESGLPIRLVQIPFPCKEVGLPIGCEN 85 (491)
T ss_pred CCCCEEEEECCCCcchHHHHHHHHHHHHhCCCeEEEEECCCcHHHHhhhhhhccccCCCeEEEEcCCCCccCCCCCCccc
Confidence 3457999999999999999999999999999999999999876544332110 011389999998754 477766544
Q ss_pred cCCCCh-hHHHHHHHHHhhhhHHHHHHHhhc--CCCEEEEcCCcccHHHHHHHhCCCeEEEecchHHHHHhhcccccccc
Q 011765 80 TIDLPY-DEVKYLKQSFDCLEEPMAKLLQSL--APDWLLFDFAAYWLPARARELGIPSGFFSIFTAATLGYFGPSSVLIN 156 (478)
Q Consensus 80 ~~~~~~-~~~~~~~~~~~~~~~~l~~ll~~~--~pD~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~~ 156 (478)
..+... .....+......+.+.+.+++++. +|+|||+|.+++|+..+|+++|||.+.|++++++....+........
T Consensus 86 ~~~~~~~~~~~~~~~~~~~l~~~l~~lL~~~~~pp~cIV~D~f~~Wa~dVA~~lgIP~v~F~t~~a~~~~~~~~~~~~~~ 165 (491)
T PLN02534 86 LDTLPSRDLLRKFYDAVDKLQQPLERFLEQAKPPPSCIISDKCLSWTSKTAQRFNIPRIVFHGMCCFSLLSSHNIRLHNA 165 (491)
T ss_pred cccCCcHHHHHHHHHHHHHhHHHHHHHHHhcCCCCcEEEECCccHHHHHHHHHhCCCeEEEecchHHHHHHHHHHHHhcc
Confidence 333232 344445555566778888888763 57999999999999999999999999999999988765432210000
Q ss_pred ccCCCCCCCCcccCCCccccccc-ccccchhhhhhhhhhhcCCcccch-hhhhhhccccCCcEEEEcCcCccChHHHHHH
Q 011765 157 DSGDHLKTPEDYTRVPNWVSFPT-TISYRLFEARKVFDILISDESNVS-HGYRFGQSLKGCDIVAVRSCMEFEPEWLKLL 234 (478)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~ 234 (478)
..+ ..... .+..+|... ...++...+.+.. ... ..+. ....+......++++++|||++||+..++.+
T Consensus 166 --~~~-~~~~~---~~~~iPg~p~~~~l~~~dlp~~~---~~~-~~~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~l~~l 235 (491)
T PLN02534 166 --HLS-VSSDS---EPFVVPGMPQSIEITRAQLPGAF---VSL-PDLDDVRNKMREAESTAFGVVVNSFNELEHGCAEAY 235 (491)
T ss_pred --ccc-CCCCC---ceeecCCCCccccccHHHCChhh---cCc-ccHHHHHHHHHhhcccCCEEEEecHHHhhHHHHHHH
Confidence 000 00000 111123211 1122333322211 000 1111 1112222334577999999999999999999
Q ss_pred HhhcCCCeeeeccCCCCCCCCC---CCCC--CCChhhHhhhcccCCCCceEEEEeCcccCCCHHHHHHHHHHHHhCCCCE
Q 011765 235 EQLHRKPVIPVGQLPTTTGDGD---SDAE--TDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELSKLPF 309 (478)
Q Consensus 235 ~~~~~~~~~~vGp~~~~~~~~~---~~~~--~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~ 309 (478)
...++++++.|||+........ .... ..+.++|.+||+.++++++|||||||......+++.+++.+|+.++.+|
T Consensus 236 ~~~~~~~v~~VGPL~~~~~~~~~~~~~~~~~~~~~~~cl~wLd~~~~~sVvyvsfGS~~~~~~~q~~e~a~gl~~~~~~f 315 (491)
T PLN02534 236 EKAIKKKVWCVGPVSLCNKRNLDKFERGNKASIDETQCLEWLDSMKPRSVIYACLGSLCRLVPSQLIELGLGLEASKKPF 315 (491)
T ss_pred HhhcCCcEEEECcccccccccccccccCCccccchHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCE
Confidence 8877778999999974221000 0000 1123569999999998999999999999999999999999999999999
Q ss_pred EEEEecCCCCCCCCCCCCChhhhhhcCCCcEEEeccCChhhhhcCCCceeeeeccChhhHHHHHHhCCcEeccccccchh
Q 011765 310 FWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQG 389 (478)
Q Consensus 310 i~~~~~~~~~~~~~~~~~p~~~~~~~~~~n~~~~~~vpq~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~ 389 (478)
+|+++......+.....+|++|.++.+.+|+++.+|+||.+||+|+++++|||||||||++||+++|||||++|++.||+
T Consensus 316 lW~~r~~~~~~~~~~~~~p~gf~~~~~~~g~~v~~w~pq~~iL~h~~v~~fvtH~G~ns~~ea~~~GvP~v~~P~~~dq~ 395 (491)
T PLN02534 316 IWVIKTGEKHSELEEWLVKENFEERIKGRGLLIKGWAPQVLILSHPAIGGFLTHCGWNSTIEGICSGVPMITWPLFAEQF 395 (491)
T ss_pred EEEEecCccccchhhhcCchhhHHhhccCCeeccCCCCHHHHhcCCccceEEecCccHHHHHHHHcCCCEEeccccccHH
Confidence 99998431100001123688999888888999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHhhc-CeEEEeecc--------CCCC-cccHHHHHHHHHHHhc--ccchHHHHHHHHHHHHHhc----ccCChHH
Q 011765 390 LNAKLLEEK-QIVELIPRD--------EGDG-FFTRNSVAESLRLVLV--EEKGQIYRDKAKEMKGLFG----DKGRHDR 453 (478)
Q Consensus 390 ~na~~v~~~-g~G~~l~~~--------~~~~-~~~~~~l~~~i~~ll~--~~~~~~~~~~a~~~~~~~~----~~~~~~~ 453 (478)
.||+++++. |+|+.+... ++.| ++++++|+++|+++|. +|+++++|+||++|++..+ ++|++.+
T Consensus 396 ~na~~~~e~~~vGv~~~~~~~~~~~~~~~~~~~v~~eev~~~v~~~m~~~~eeg~~~R~rA~elk~~a~~Av~~GGSS~~ 475 (491)
T PLN02534 396 LNEKLIVEVLRIGVRVGVEVPVRWGDEERVGVLVKKDEVEKAVKTLMDDGGEEGERRRRRAQELGVMARKAMELGGSSHI 475 (491)
T ss_pred HHHHHHHHhhcceEEecccccccccccccccCccCHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHhcCCCcHHH
Confidence 999998755 999988521 0112 5899999999999996 4557899999999999865 6688899
Q ss_pred HHHHHHHHHHhc
Q 011765 454 YVDNFLNYLKNH 465 (478)
Q Consensus 454 ~~~~i~~~~~~~ 465 (478)
+++.|++.+.+.
T Consensus 476 nl~~fv~~i~~~ 487 (491)
T PLN02534 476 NLSILIQDVLKQ 487 (491)
T ss_pred HHHHHHHHHHHH
Confidence 999999998754
|
|
| >PLN02562 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-60 Score=471.32 Aligned_cols=433 Identities=23% Similarity=0.288 Sum_probs=312.2
Q ss_pred CCCCCccEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCCCCCCCCcccc
Q 011765 1 MADNSKLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVDNLRENAEAT 80 (478)
Q Consensus 1 ~~~~~~~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~~ 80 (478)
|.-..+.||+++|+|++||++|++.||+.|+.+|++|||++++.+...+.....+ .++++++.+| ++++++.
T Consensus 1 ~~~~~~~HVVlvPfPaqGHi~PmL~LAk~Las~G~~VT~vtt~~~~~~~~~~~~~-~~~i~~v~lp----~g~~~~~--- 72 (448)
T PLN02562 1 MKVTQRPKIILVPYPAQGHVTPMLKLASAFLSRGFEPVVITPEFIHRRISATLDP-KLGITFMSIS----DGQDDDP--- 72 (448)
T ss_pred CCCCCCcEEEEEcCccccCHHHHHHHHHHHHhCCCEEEEEeCcchhhhhhhccCC-CCCEEEEECC----CCCCCCc---
Confidence 4445577999999999999999999999999999999999999876554432111 1248999988 4443221
Q ss_pred CCCChhHHHHHHHHHhhhhHHHHHHHhhc---CC-CEEEEcCCcccHHHHHHHhCCCeEEEecchHHHHHhhcccccccc
Q 011765 81 IDLPYDEVKYLKQSFDCLEEPMAKLLQSL---AP-DWLLFDFAAYWLPARARELGIPSGFFSIFTAATLGYFGPSSVLIN 156 (478)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~ll~~~---~p-D~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~~ 156 (478)
..+...++......+.+.+.+++++. .| +|||+|.+.+|+..+|+++|||.+.+|++++..+..+.+...+..
T Consensus 73 ---~~~~~~l~~a~~~~~~~~l~~ll~~l~~~~pv~cvI~D~~~~w~~~vA~~~giP~~~f~~~~a~~~~~~~~~~~~~~ 149 (448)
T PLN02562 73 ---PRDFFSIENSMENTMPPQLERLLHKLDEDGEVACMVVDLLASWAIGVADRCGVPVAGFWPVMLAAYRLIQAIPELVR 149 (448)
T ss_pred ---cccHHHHHHHHHHhchHHHHHHHHHhcCCCCcEEEEECCccHhHHHHHHHhCCCEEEEechhHHHHHHHHHHHHHhh
Confidence 11222233333335667777777664 23 799999999999999999999999999999887776654321111
Q ss_pred ccCCCCCCCCcccCCCcccccccccccchhhhhhhhhhhcCCcccchhhhhhhccccCCcEEEEcCcCccChHHHHHHHh
Q 011765 157 DSGDHLKTPEDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQ 236 (478)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~~~ 236 (478)
.+..+.........+...+|... .++..+++.+..........+....+......+++++++|||++||+..++....
T Consensus 150 ~~~~~~~~~~~~~~~~~~~Pg~~--~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~ 227 (448)
T PLN02562 150 TGLISETGCPRQLEKICVLPEQP--LLSTEDLPWLIGTPKARKARFKFWTRTLERTKSLRWILMNSFKDEEYDDVKNHQA 227 (448)
T ss_pred ccccccccccccccccccCCCCC--CCChhhCcchhcCCCcchHHHHHHHHHHhccccCCEEEEcChhhhCHHHHHHHHh
Confidence 11110000000000111223211 1223333322210000111233333444556678999999999999988876653
Q ss_pred h----cCCCeeeeccCCCCCCCCCCCCC-CCChhhHhhhcccCCCCceEEEEeCccc-CCCHHHHHHHHHHHHhCCCCEE
Q 011765 237 L----HRKPVIPVGQLPTTTGDGDSDAE-TDTWRSIKEWLDEQEKGSVVYVAFGSEA-KPSQEELTEIALGLELSKLPFF 310 (478)
Q Consensus 237 ~----~~~~~~~vGp~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~v~vs~Gs~~-~~~~~~~~~~~~al~~~~~~~i 310 (478)
. ..++++.|||+............ ...+.++.+||+.++++++|||||||.. ..+.+++.+++.+|++++.+||
T Consensus 228 ~~~~~~~~~v~~iGpl~~~~~~~~~~~~~~~~~~~c~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~l~~~l~~~g~~fi 307 (448)
T PLN02562 228 SYNNGQNPQILQIGPLHNQEATTITKPSFWEEDMSCLGWLQEQKPNSVIYISFGSWVSPIGESNVRTLALALEASGRPFI 307 (448)
T ss_pred hhccccCCCEEEecCcccccccccCCCccccchHHHHHHHhcCCCCceEEEEecccccCCCHHHHHHHHHHHHHCCCCEE
Confidence 2 34679999999864321000000 1234568899999988899999999976 5788999999999999999999
Q ss_pred EEEecCCCCCCCCCCCCChhhhhhcCCCcEEEeccCChhhhhcCCCceeeeeccChhhHHHHHHhCCcEeccccccchhh
Q 011765 311 WVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQGL 390 (478)
Q Consensus 311 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~n~~~~~~vpq~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~ 390 (478)
|+++.. ....+|++++++.. +|+++.+|+||.+||+|+++++|||||||||++||+++|||+|++|+++||+.
T Consensus 308 W~~~~~------~~~~l~~~~~~~~~-~~~~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~ 380 (448)
T PLN02562 308 WVLNPV------WREGLPPGYVERVS-KQGKVVSWAPQLEVLKHQAVGCYLTHCGWNSTMEAIQCQKRLLCYPVAGDQFV 380 (448)
T ss_pred EEEcCC------chhhCCHHHHHHhc-cCEEEEecCCHHHHhCCCccceEEecCcchhHHHHHHcCCCEEeCCcccchHH
Confidence 999743 22357888877764 46777899999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhc-CeEEEeeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhcc---cCChHHHHHHHHHHH
Q 011765 391 NAKLLEEK-QIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFGD---KGRHDRYVDNFLNYL 462 (478)
Q Consensus 391 na~~v~~~-g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~---~~~~~~~~~~i~~~~ 462 (478)
||+++++. |+|+.+. + ++.++|+++|+++|+ +++||+||+++++.+.+ +|++.++++.|++.+
T Consensus 381 na~~~~~~~g~g~~~~--~----~~~~~l~~~v~~~l~---~~~~r~~a~~l~~~~~~~~~gGSS~~nl~~~v~~~ 447 (448)
T PLN02562 381 NCAYIVDVWKIGVRIS--G----FGQKEVEEGLRKVME---DSGMGERLMKLRERAMGEEARLRSMMNFTTLKDEL 447 (448)
T ss_pred HHHHHHHHhCceeEeC--C----CCHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHh
Confidence 99999875 9998874 4 799999999999999 88999999999999864 368899999998876
|
|
| >PLN02207 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-59 Score=462.73 Aligned_cols=439 Identities=21% Similarity=0.352 Sum_probs=310.5
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCC--CeEEEEeCCCccc-cCCCCCC---CCCCCeEEEEecCCCCCCCCCCcccc
Q 011765 7 LQIAMFPWLAFGHMIPWLELAKLIAQKG--HKIFFISTPRNID-RLPRLPQ---NLASMIQFVKISLPHVDNLRENAEAT 80 (478)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~La~~L~~rG--h~Vt~~~~~~~~~-~~~~~g~---~~~~~i~~~~i~~~~~~~l~~~~~~~ 80 (478)
.||+++|+|++||++|++.||+.|+.+| ..|||++++.... .+..... ...+.+.|+.+|.... .+.. ...
T Consensus 4 ~hvv~~P~p~qGHi~P~l~lA~~La~~gg~~~vT~~~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~--~~~~-~~~ 80 (468)
T PLN02207 4 AELIFIPTPTVGHLVPFLEFARRLIEQDDRIRITILLMKLQGQSHLDTYVKSIASSQPFVRFIDVPELEE--KPTL-GGT 80 (468)
T ss_pred cEEEEeCCcchhhHHHHHHHHHHHHhCCCCeEEEEEEcCCCcchhhHHhhhhccCCCCCeEEEEeCCCCC--CCcc-ccc
Confidence 5999999999999999999999999998 9999999987652 1111111 1113599999983111 1110 111
Q ss_pred CCCChhHHHHHHHHHhhh----hHHHHHHHhhc----CC-CEEEEcCCcccHHHHHHHhCCCeEEEecchHHHHHhhccc
Q 011765 81 IDLPYDEVKYLKQSFDCL----EEPMAKLLQSL----AP-DWLLFDFAAYWLPARARELGIPSGFFSIFTAATLGYFGPS 151 (478)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~----~~~l~~ll~~~----~p-D~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~ 151 (478)
.+....+......+ .+.+.+++++. +| +|||+|.+.+|+..+|+++|||.+.++++++..+..+.+.
T Consensus 81 ----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pv~cvV~D~~~~w~~~vA~~~gip~~~f~~~~a~~~~~~~~~ 156 (468)
T PLN02207 81 ----QSVEAYVYDVIEKNIPLVRNIVMDILSSLALDGVKVKGFVADFFCLPMIDVAKDVSLPFYVFLTTNSGFLAMMQYL 156 (468)
T ss_pred ----cCHHHHHHHHHHhcchhHHHHHHHHHHHhccCCCCeEEEEECCcchHHHHHHHHhCCCEEEEECccHHHHHHHHHh
Confidence 11222333333333 44566666543 34 8999999999999999999999999999999888766544
Q ss_pred cccccccCCCCCCCCcccCCCcccccccccccchhhhhhhhhhhcCCcccchhhhhhhccccCCcEEEEcCcCccChHHH
Q 011765 152 SVLINDSGDHLKTPEDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWL 231 (478)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~ 231 (478)
............ ...+ .+..+|+.. ..++...++.+. ... ..+....+......+++++++|||++||++.+
T Consensus 157 ~~~~~~~~~~~~--~~~~-~~~~vPgl~-~~l~~~dlp~~~---~~~-~~~~~~~~~~~~~~~~~~vlvNtf~~LE~~~~ 228 (468)
T PLN02207 157 ADRHSKDTSVFV--RNSE-EMLSIPGFV-NPVPANVLPSAL---FVE-DGYDAYVKLAILFTKANGILVNSSFDIEPYSV 228 (468)
T ss_pred hhccccccccCc--CCCC-CeEECCCCC-CCCChHHCcchh---cCC-ccHHHHHHHHHhcccCCEEEEEchHHHhHHHH
Confidence 211111000000 0000 111233210 012333332221 111 11222223333567889999999999999988
Q ss_pred HHHHh-hcCCCeeeeccCCCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccCCCHHHHHHHHHHHHhCCCCEE
Q 011765 232 KLLEQ-LHRKPVIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELSKLPFF 310 (478)
Q Consensus 232 ~~~~~-~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i 310 (478)
+.++. ...++++.|||+................+++.+||+.++++++|||||||....+.+++.+++.+|+.++++||
T Consensus 229 ~~~~~~~~~p~v~~VGPl~~~~~~~~~~~~~~~~~~~~~WLd~~~~~sVVyvSfGS~~~~~~~q~~ela~~l~~~~~~fl 308 (468)
T PLN02207 229 NHFLDEQNYPSVYAVGPIFDLKAQPHPEQDLARRDELMKWLDDQPEASVVFLCFGSMGRLRGPLVKEIAHGLELCQYRFL 308 (468)
T ss_pred HHHHhccCCCcEEEecCCcccccCCCCccccchhhHHHHHHhcCCCCcEEEEEeccCcCCCHHHHHHHHHHHHHCCCcEE
Confidence 88855 24467999999985322110000011236799999999888999999999999999999999999999999999
Q ss_pred EEEecCCCCCCCCCCCCChhhhhhcCCCcEEEeccCChhhhhcCCCceeeeeccChhhHHHHHHhCCcEeccccccchhh
Q 011765 311 WVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQGL 390 (478)
Q Consensus 311 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~n~~~~~~vpq~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~ 390 (478)
|+++..... ..+.+|++|+++...+ ..+.+|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.
T Consensus 309 W~~r~~~~~---~~~~lp~~f~er~~~~-g~i~~W~PQ~~IL~H~~vg~FvTH~GwnS~~Eai~~GVP~l~~P~~~DQ~~ 384 (468)
T PLN02207 309 WSLRTEEVT---NDDLLPEGFLDRVSGR-GMICGWSPQVEILAHKAVGGFVSHCGWNSIVESLWFGVPIVTWPMYAEQQL 384 (468)
T ss_pred EEEeCCCcc---ccccCCHHHHhhcCCC-eEEEEeCCHHHHhcccccceeeecCccccHHHHHHcCCCEEecCccccchh
Confidence 999853211 2346899998887654 466699999999999999999999999999999999999999999999999
Q ss_pred HHHHHhh-cCeEEEeecc---CCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhc----ccCChHHHHHHHHHHH
Q 011765 391 NAKLLEE-KQIVELIPRD---EGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFG----DKGRHDRYVDNFLNYL 462 (478)
Q Consensus 391 na~~v~~-~g~G~~l~~~---~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~----~~~~~~~~~~~i~~~~ 462 (478)
||+++++ +|+|+.+... +..+.++.++|+++|+++|++ ++++||+||+++++.++ ++|++.++++.+++.+
T Consensus 385 Na~~~~~~~gvGv~~~~~~~~~~~~~v~~e~i~~av~~vm~~-~~~~~r~~a~~l~~~a~~A~~~GGSS~~~l~~~v~~~ 463 (468)
T PLN02207 385 NAFLMVKELKLAVELKLDYRVHSDEIVNANEIETAIRCVMNK-DNNVVRKRVMDISQMIQRATKNGGSSFAAIEKFIHDV 463 (468)
T ss_pred hHHHHHHHhCceEEEecccccccCCcccHHHHHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Confidence 9998776 7999987421 012347999999999999973 36899999999999976 6677899999999988
Q ss_pred Hhc
Q 011765 463 KNH 465 (478)
Q Consensus 463 ~~~ 465 (478)
...
T Consensus 464 ~~~ 466 (468)
T PLN02207 464 IGI 466 (468)
T ss_pred Hhc
Confidence 654
|
|
| >PLN03015 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-59 Score=460.41 Aligned_cols=435 Identities=28% Similarity=0.388 Sum_probs=317.8
Q ss_pred ccEEEEecCCCccCHHHHHHHHHHHHhC-CCeEEEEeCCCccccC--CCCCCCC--CCCeEEEEecCCCCCCC-CCCccc
Q 011765 6 KLQIAMFPWLAFGHMIPWLELAKLIAQK-GHKIFFISTPRNIDRL--PRLPQNL--ASMIQFVKISLPHVDNL-RENAEA 79 (478)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~La~~L~~r-Gh~Vt~~~~~~~~~~~--~~~g~~~--~~~i~~~~i~~~~~~~l-~~~~~~ 79 (478)
+.||+++|+|++||++|++.||+.|+.+ |..|||++++...... .....+. .+.+.++.+|++..+++ +.+
T Consensus 3 ~pHvvl~P~p~qGHi~P~l~LAk~La~~~g~~vT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~l~~~~--- 79 (470)
T PLN03015 3 QPHALLVASPGLGHLIPILELGNRLSSVLNIHVTILAVTSGSSSPTETEAIHAAAARTTCQITEIPSVDVDNLVEPD--- 79 (470)
T ss_pred CcEEEEECCcccccHHHHHHHHHHHHhCCCCeEEEEECCCchhhhccccccccccCCCceEEEECCCCccccCCCCC---
Confidence 3599999999999999999999999987 9999999888655332 1111111 12499999986554443 211
Q ss_pred cCCCChhHHHHHHHHHhhhhHHHHHHHhhc--CCCEEEEcCCcccHHHHHHHhCCC-eEEEecchHHHHHhhcccccccc
Q 011765 80 TIDLPYDEVKYLKQSFDCLEEPMAKLLQSL--APDWLLFDFAAYWLPARARELGIP-SGFFSIFTAATLGYFGPSSVLIN 156 (478)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~--~pD~vI~D~~~~~~~~~A~~lgIP-~i~~~~~~~~~~~~~~~~~~~~~ 156 (478)
. +....+......+.+.+++++++. +|+|||+|.+++|+..+|+++||| .+.++++.++.+..+++.....+
T Consensus 80 --~---~~~~~~~~~~~~~~~~~~~~l~~l~~~~~ciV~D~f~~w~~~vA~~lgIP~~~~f~~~~a~~~~~~~~l~~~~~ 154 (470)
T PLN03015 80 --A---TIFTKMVVKMRAMKPAVRDAVKSMKRKPTVMIVDFFGTALMSIADDVGVTAKYVYIPSHAWFLAVMVYLPVLDT 154 (470)
T ss_pred --c---cHHHHHHHHHHhchHHHHHHHHhcCCCCeEEEEcCCcHHHHHHHHHcCCCEEEEEcCHHHHHHHHHHhhhhhhc
Confidence 0 222234445556777888888765 679999999999999999999999 58888888877765554321111
Q ss_pred ccCCCCCCCCcccCCCcccccccccccchhhhhhhhhhhcCCcccchhhhhhhccccCCcEEEEcCcCccChHHHHHHHh
Q 011765 157 DSGDHLKTPEDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQ 236 (478)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~~~ 236 (478)
. ..... ...+. +..+|+.. .++..++..... ......+...........+++++++|||++||+..++.++.
T Consensus 155 ~-~~~~~--~~~~~-~~~vPg~p--~l~~~dlp~~~~--~~~~~~~~~~~~~~~~~~~a~gvlvNTf~eLE~~~~~~l~~ 226 (470)
T PLN03015 155 V-VEGEY--VDIKE-PLKIPGCK--PVGPKELMETML--DRSDQQYKECVRSGLEVPMSDGVLVNTWEELQGNTLAALRE 226 (470)
T ss_pred c-ccccc--CCCCC-eeeCCCCC--CCChHHCCHhhc--CCCcHHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHHh
Confidence 0 00000 00011 11233221 123333222111 11111121122222346789999999999999999998877
Q ss_pred hc------CCCeeeeccCCCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccCCCHHHHHHHHHHHHhCCCCEE
Q 011765 237 LH------RKPVIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELSKLPFF 310 (478)
Q Consensus 237 ~~------~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i 310 (478)
.+ .++++.|||+...... ....+++.+|||.++++++|||||||....+.+++.+++.+|+.++++||
T Consensus 227 ~~~~~~~~~~~v~~VGPl~~~~~~------~~~~~~~~~WLd~~~~~sVvyvsFGS~~~~~~~q~~ela~gl~~s~~~Fl 300 (470)
T PLN03015 227 DMELNRVMKVPVYPIGPIVRTNVH------VEKRNSIFEWLDKQGERSVVYVCLGSGGTLTFEQTVELAWGLELSGQRFV 300 (470)
T ss_pred hcccccccCCceEEecCCCCCccc------ccchHHHHHHHHhCCCCCEEEEECCcCCcCCHHHHHHHHHHHHhCCCcEE
Confidence 52 2469999999742111 12245799999999889999999999999999999999999999999999
Q ss_pred EEEecCCC------CCC-CCCCCCChhhhhhcCCCcEEEeccCChhhhhcCCCceeeeeccChhhHHHHHHhCCcEeccc
Q 011765 311 WVLKKRLG------QAD-TEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLT 383 (478)
Q Consensus 311 ~~~~~~~~------~~~-~~~~~~p~~~~~~~~~~n~~~~~~vpq~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P 383 (478)
|+++.... .++ +....+|+++.++.+.+++++.+|+||.+||+|+++++|||||||||++||+++|||||++|
T Consensus 301 Wv~r~~~~~~~~~~~~~~~~~~~lp~~f~er~~~rGl~v~~W~PQ~~vL~h~~vg~fvtH~GwnS~~Eai~~GvP~v~~P 380 (470)
T PLN03015 301 WVLRRPASYLGASSSDDDQVSASLPEGFLDRTRGVGLVVTQWAPQVEILSHRSIGGFLSHCGWSSVLESLTKGVPIVAWP 380 (470)
T ss_pred EEEecCccccccccccccchhhcCChHHHHhhccCceEEEecCCHHHHhccCccCeEEecCCchhHHHHHHcCCCEEecc
Confidence 99974311 000 02236899999999999999999999999999999999999999999999999999999999
Q ss_pred cccchhhHHHHH-hhcCeEEEeeccCCCCcccHHHHHHHHHHHhc--ccchHHHHHHHHHHHHHhc----ccCChHHHHH
Q 011765 384 CYADQGLNAKLL-EEKQIVELIPRDEGDGFFTRNSVAESLRLVLV--EEKGQIYRDKAKEMKGLFG----DKGRHDRYVD 456 (478)
Q Consensus 384 ~~~DQ~~na~~v-~~~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~--~~~~~~~~~~a~~~~~~~~----~~~~~~~~~~ 456 (478)
++.||+.||+++ ++.|+|+.+....+.+.++.++|+++|+++|+ +++++++|+||++|++..+ ++|++.++++
T Consensus 381 ~~~DQ~~na~~~~~~~gvg~~~~~~~~~~~v~~e~i~~~v~~lm~~~~eeg~~~R~ra~~lk~~a~~Av~eGGSS~~nl~ 460 (470)
T PLN03015 381 LYAEQWMNATLLTEEIGVAVRTSELPSEKVIGREEVASLVRKIVAEEDEEGQKIRAKAEEVRVSSERAWSHGGSSYNSLF 460 (470)
T ss_pred cccchHHHHHHHHHHhCeeEEecccccCCccCHHHHHHHHHHHHccCcccHHHHHHHHHHHHHHHHHHhcCCCcHHHHHH
Confidence 999999999998 56799999962111345899999999999996 2557899999999999865 6678899999
Q ss_pred HHHHHH
Q 011765 457 NFLNYL 462 (478)
Q Consensus 457 ~i~~~~ 462 (478)
.+++.+
T Consensus 461 ~~~~~~ 466 (470)
T PLN03015 461 EWAKRC 466 (470)
T ss_pred HHHHhc
Confidence 998876
|
|
| >PLN02448 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-59 Score=464.98 Aligned_cols=434 Identities=25% Similarity=0.387 Sum_probs=313.1
Q ss_pred CCccEEEEecCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCCCCCCCCccccC
Q 011765 4 NSKLQIAMFPWLAFGHMIPWLELAKLIAQK--GHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVDNLRENAEATI 81 (478)
Q Consensus 4 ~~~~~il~~~~~~~gH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~~~ 81 (478)
+.+.||+++|+|++||++|++.||++|+.| ||.|||++++.+...+..... .++++|+.+| ++++++....
T Consensus 8 ~~~~hVvlvp~pa~GHi~P~l~LA~~L~~~~~G~~VT~~~t~~~~~~i~~~~~--~~gi~fv~lp----~~~p~~~~~~- 80 (459)
T PLN02448 8 TTSCHVVAMPYPGRGHINPMMNLCKLLASRKPDILITFVVTEEWLGLIGSDPK--PDNIRFATIP----NVIPSELVRA- 80 (459)
T ss_pred CCCcEEEEECCcccccHHHHHHHHHHHHcCCCCcEEEEEeCCchHhHhhccCC--CCCEEEEECC----CCCCCccccc-
Confidence 457899999999999999999999999999 999999999998776665421 1249999998 3344332211
Q ss_pred CCChhHHHHHHHHHhhhhHHHHHHHhhc--CCCEEEEcCCcccHHHHHHHhCCCeEEEecchHHHHHhhccccccccccC
Q 011765 82 DLPYDEVKYLKQSFDCLEEPMAKLLQSL--APDWLLFDFAAYWLPARARELGIPSGFFSIFTAATLGYFGPSSVLINDSG 159 (478)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~l~~ll~~~--~pD~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~~~~~ 159 (478)
.+...++......+.+.+.+++++. ++||||+|.+++|+..+|+++|||++.++++++..+..+.+...+.....
T Consensus 81 ---~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~VI~D~~~~wa~~vA~~lgIP~v~f~~~~a~~~~~~~~~~~~~~~~~ 157 (459)
T PLN02448 81 ---ADFPGFLEAVMTKMEAPFEQLLDRLEPPVTAIVADTYLFWAVGVGNRRNIPVASLWTMSATFFSVFYHFDLLPQNGH 157 (459)
T ss_pred ---cCHHHHHHHHHHHhHHHHHHHHHhcCCCcEEEEECCccHHHHHHHHHhCCCeEEEEhHHHHHHHHHHHhhhhhhccC
Confidence 1222333333334556666776653 57999999999999999999999999999999977776555432211111
Q ss_pred CCCCCCCcccCCCcccccccccccchhhhhhhhhhhcCCc-ccchhhhhhhccccCCcEEEEcCcCccChHHHHHHHhhc
Q 011765 160 DHLKTPEDYTRVPNWVSFPTTISYRLFEARKVFDILISDE-SNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLH 238 (478)
Q Consensus 160 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~~~~~ 238 (478)
.+.........+..++|... .++...+..+. .... ..+...........+++.+++|||++||+..++++...+
T Consensus 158 ~~~~~~~~~~~~~~~iPg~~--~l~~~dlp~~~---~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~~~ 232 (459)
T PLN02448 158 FPVELSESGEERVDYIPGLS--STRLSDLPPIF---HGNSRRVLKRILEAFSWVPKAQYLLFTSFYELEAQAIDALKSKF 232 (459)
T ss_pred CCCccccccCCccccCCCCC--CCChHHCchhh---cCCchHHHHHHHHHHhhcccCCEEEEccHHHhhHHHHHHHHhhc
Confidence 11000000011112334211 12222222221 1111 112223333334567789999999999999999998877
Q ss_pred CCCeeeeccCCCCCCCC-CCCC--CCCChhhHhhhcccCCCCceEEEEeCcccCCCHHHHHHHHHHHHhCCCCEEEEEec
Q 011765 239 RKPVIPVGQLPTTTGDG-DSDA--ETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELSKLPFFWVLKK 315 (478)
Q Consensus 239 ~~~~~~vGp~~~~~~~~-~~~~--~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~ 315 (478)
+++++.|||+....... .... ......++..||+..+++++|||||||....+.+++.+++++|+.++.+|||+++.
T Consensus 233 ~~~~~~iGP~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvsfGs~~~~~~~~~~~~~~~l~~~~~~~lw~~~~ 312 (459)
T PLN02448 233 PFPVYPIGPSIPYMELKDNSSSSNNEDNEPDYFQWLDSQPEGSVLYVSLGSFLSVSSAQMDEIAAGLRDSGVRFLWVARG 312 (459)
T ss_pred CCceEEecCcccccccCCCccccccccchhHHHHHHcCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCEEEEEcC
Confidence 77899999997532110 0000 01122479999999988899999999998888999999999999999999998764
Q ss_pred CCCCCCCCCCCCChhhhhhcCCCcEEEeccCChhhhhcCCCceeeeeccChhhHHHHHHhCCcEeccccccchhhHHHHH
Q 011765 316 RLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQGLNAKLL 395 (478)
Q Consensus 316 ~~~~~~~~~~~~p~~~~~~~~~~n~~~~~~vpq~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v 395 (478)
.. .++.++. .+|.++.+|+||.+||+|+++++|||||||||++||+++|||||++|++.||+.||+++
T Consensus 313 ~~-----------~~~~~~~-~~~~~v~~w~pQ~~iL~h~~v~~fvtHgG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v 380 (459)
T PLN02448 313 EA-----------SRLKEIC-GDMGLVVPWCDQLKVLCHSSVGGFWTHCGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLI 380 (459)
T ss_pred ch-----------hhHhHhc-cCCEEEeccCCHHHHhccCccceEEecCchhHHHHHHHcCCCEEeccccccchhhHHHH
Confidence 21 1222222 13677789999999999999999999999999999999999999999999999999999
Q ss_pred hh-cCeEEEeeccC-CCCcccHHHHHHHHHHHhcc--cchHHHHHHHHHHHHHhc----ccCChHHHHHHHHHHHHh
Q 011765 396 EE-KQIVELIPRDE-GDGFFTRNSVAESLRLVLVE--EKGQIYRDKAKEMKGLFG----DKGRHDRYVDNFLNYLKN 464 (478)
Q Consensus 396 ~~-~g~G~~l~~~~-~~~~~~~~~l~~~i~~ll~~--~~~~~~~~~a~~~~~~~~----~~~~~~~~~~~i~~~~~~ 464 (478)
++ +|+|+.+.... +.+.+++++|+++|+++|.+ ++.++||+||++|+++.+ ++|++.++++.+++.+.+
T Consensus 381 ~~~~g~G~~~~~~~~~~~~~~~~~l~~av~~vl~~~~~~~~~~r~~a~~~~~~~~~a~~~gGss~~~l~~~v~~~~~ 457 (459)
T PLN02448 381 VEDWKIGWRVKREVGEETLVGREEIAELVKRFMDLESEEGKEMRRRAKELQEICRGAIAKGGSSDTNLDAFIRDISQ 457 (459)
T ss_pred HHHhCceEEEecccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhc
Confidence 98 48888886321 12347999999999999973 345689999999999865 668889999999998864
|
|
| >PLN03004 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-59 Score=457.70 Aligned_cols=421 Identities=24% Similarity=0.351 Sum_probs=298.1
Q ss_pred ccEEEEecCCCccCHHHHHHHHHHHHhCC--CeEEE--EeCCCccccCCCCC---CCCCCCeEEEEecCCCCCCCCCCcc
Q 011765 6 KLQIAMFPWLAFGHMIPWLELAKLIAQKG--HKIFF--ISTPRNIDRLPRLP---QNLASMIQFVKISLPHVDNLRENAE 78 (478)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~La~~L~~rG--h~Vt~--~~~~~~~~~~~~~g---~~~~~~i~~~~i~~~~~~~l~~~~~ 78 (478)
+-||+++|+|++||++|++.||+.|+.+| +.||+ .+++.+........ .+..+++.++.+|++.. .+....
T Consensus 3 ~~Hvvl~P~p~qGHi~P~l~LA~~La~~g~~~~vti~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~--~~~~~~ 80 (451)
T PLN03004 3 EEAIVLYPAPPIGHLVSMVELGKTILSKNPSLSIHIILVPPPYQPESTATYISSVSSSFPSITFHHLPAVTP--YSSSST 80 (451)
T ss_pred CcEEEEeCCcccchHHHHHHHHHHHHhCCCceEEEEEEecCcchhhhhhhhhccccCCCCCeEEEEcCCCCC--CCCccc
Confidence 35999999999999999999999999998 55665 44443221111100 01123599999984321 111111
Q ss_pred ccCCCChhHHHHHHHHHhhhhHHHHHHHhhc---C-CCEEEEcCCcccHHHHHHHhCCCeEEEecchHHHHHhhcccccc
Q 011765 79 ATIDLPYDEVKYLKQSFDCLEEPMAKLLQSL---A-PDWLLFDFAAYWLPARARELGIPSGFFSIFTAATLGYFGPSSVL 154 (478)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~---~-pD~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~ 154 (478)
. . ......+......+.+.+.+++++. + ++|||+|.+.+|+..+|+++|||.+.+++++++.+..+.+....
T Consensus 81 ~--~--~~~~~~~~~~~~~~~~~~~~~l~~l~~~~pv~cII~D~~~~Wa~~vA~~lgIP~v~F~t~sA~~~~~~~~~~~~ 156 (451)
T PLN03004 81 S--R--HHHESLLLEILCFSNPSVHRTLFSLSRNFNVRAMIIDFFCTAVLDITADFTFPVYFFYTSGAACLAFSFYLPTI 156 (451)
T ss_pred c--c--cCHHHHHHHHHHhhhHHHHHHHHhcCCCCCceEEEECCcchhHHHHHHHhCCCEEEEeCHhHHHHHHHHHHHhc
Confidence 1 1 1122233333445555566666553 3 49999999999999999999999999999999999887664311
Q ss_pred ccccCCCCCCCCcccCCCcccccccccccchhhhhhhhhhhcCCcccchhhhhhhccccCCcEEEEcCcCccChHHHHHH
Q 011765 155 INDSGDHLKTPEDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLL 234 (478)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~ 234 (478)
.+. .+.....+ ..+..+|+. ..++...++.+.. ......+...........+++++++|||++||+..++.+
T Consensus 157 ~~~--~~~~~~~~--~~~v~iPg~--p~l~~~dlp~~~~--~~~~~~~~~~~~~~~~~~~~~~vl~NTf~eLE~~~l~~l 228 (451)
T PLN03004 157 DET--TPGKNLKD--IPTVHIPGV--PPMKGSDMPKAVL--ERDDEVYDVFIMFGKQLSKSSGIIINTFDALENRAIKAI 228 (451)
T ss_pred ccc--cccccccc--CCeecCCCC--CCCChHHCchhhc--CCchHHHHHHHHHHHhhcccCeeeeeeHHHhHHHHHHHH
Confidence 110 00000000 001112211 1122233332221 111111233333444566789999999999999999998
Q ss_pred HhhcC-CCeeeeccCCCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccCCCHHHHHHHHHHHHhCCCCEEEEE
Q 011765 235 EQLHR-KPVIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELSKLPFFWVL 313 (478)
Q Consensus 235 ~~~~~-~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~ 313 (478)
+..+. ++++.|||+........ .. ....+++.+||+.++++++|||||||....+.+++.+++.+|+.++.+|||++
T Consensus 229 ~~~~~~~~v~~vGPl~~~~~~~~-~~-~~~~~~c~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~~FlW~~ 306 (451)
T PLN03004 229 TEELCFRNIYPIGPLIVNGRIED-RN-DNKAVSCLNWLDSQPEKSVVFLCFGSLGLFSKEQVIEIAVGLEKSGQRFLWVV 306 (451)
T ss_pred HhcCCCCCEEEEeeeccCccccc-cc-cchhhHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHHHCCCCEEEEE
Confidence 77543 57999999974321110 00 11235699999999889999999999998999999999999999999999999
Q ss_pred ecCCCCCC--CCCC-CCChhhhhhcCCCcEEEeccCChhhhhcCCCceeeeeccChhhHHHHHHhCCcEeccccccchhh
Q 011765 314 KKRLGQAD--TEPI-ELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQGL 390 (478)
Q Consensus 314 ~~~~~~~~--~~~~-~~p~~~~~~~~~~n~~~~~~vpq~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~ 390 (478)
+....... .... .+|++|+++.+.+|+++.+|+||.+||+|+++++|||||||||++||+++|||||++|++.||+.
T Consensus 307 r~~~~~~~~~~~~~~~lp~gf~er~~~~g~~v~~W~PQ~~iL~H~~v~~FvTH~G~nS~lEal~~GVP~v~~P~~~DQ~~ 386 (451)
T PLN03004 307 RNPPELEKTELDLKSLLPEGFLSRTEDKGMVVKSWAPQVPVLNHKAVGGFVTHCGWNSILEAVCAGVPMVAWPLYAEQRF 386 (451)
T ss_pred cCCccccccccchhhhCChHHHHhccCCcEEEEeeCCHHHHhCCCccceEeccCcchHHHHHHHcCCCEEeccccccchh
Confidence 85311000 0112 38999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhh-cCeEEEeeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhc
Q 011765 391 NAKLLEE-KQIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFG 446 (478)
Q Consensus 391 na~~v~~-~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~ 446 (478)
||+++++ .|+|+.++..+ ++.++.++|+++|+++++ +++||++++++++..+
T Consensus 387 na~~~~~~~g~g~~l~~~~-~~~~~~e~l~~av~~vm~---~~~~r~~a~~~~~~a~ 439 (451)
T PLN03004 387 NRVMIVDEIKIAISMNESE-TGFVSSTEVEKRVQEIIG---ECPVRERTMAMKNAAE 439 (451)
T ss_pred hHHHHHHHhCceEEecCCc-CCccCHHHHHHHHHHHhc---CHHHHHHHHHHHHHHH
Confidence 9999985 69999997532 234899999999999999 7899999999999865
|
|
| >PLN02152 indole-3-acetate beta-glucosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-58 Score=454.79 Aligned_cols=426 Identities=25% Similarity=0.395 Sum_probs=301.9
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHh-CCCeEEEEeCCCcc-ccCCCCCCCCCCCeEEEEecCCCCCCCCCCccccCCCC
Q 011765 7 LQIAMFPWLAFGHMIPWLELAKLIAQ-KGHKIFFISTPRNI-DRLPRLPQNLASMIQFVKISLPHVDNLRENAEATIDLP 84 (478)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~La~~L~~-rGh~Vt~~~~~~~~-~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~~~~~~ 84 (478)
.||+++|+|++||++|++.||+.|+. +|+.|||++++.+. ....... ...+++.|+.++ ++++++.....+
T Consensus 4 ~hvv~~P~p~qGHi~P~l~La~~La~~~G~~vT~v~t~~~~~~~~~~~~-~~~~~i~~~~i~----dglp~g~~~~~~-- 76 (455)
T PLN02152 4 PHFLLVTFPAQGHVNPSLRFARRLIKTTGTRVTFATCLSVIHRSMIPNH-NNVENLSFLTFS----DGFDDGVISNTD-- 76 (455)
T ss_pred cEEEEecCcccccHHHHHHHHHHHhhCCCcEEEEEeccchhhhhhhccC-CCCCCEEEEEcC----CCCCCccccccc--
Confidence 49999999999999999999999996 69999999998542 1111110 111358999987 677665322111
Q ss_pred hhHHHHHHHHHhhhhHHHHHHHhhc----CC-CEEEEcCCcccHHHHHHHhCCCeEEEecchHHHHHhhccccccccccC
Q 011765 85 YDEVKYLKQSFDCLEEPMAKLLQSL----AP-DWLLFDFAAYWLPARARELGIPSGFFSIFTAATLGYFGPSSVLINDSG 159 (478)
Q Consensus 85 ~~~~~~~~~~~~~~~~~l~~ll~~~----~p-D~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~~~~~ 159 (478)
.....+......+.+.+.+++++. +| +|||+|.+.+|+..+|+++|||.+.+++++++.+..+++.... .
T Consensus 77 -~~~~~~~~~~~~~~~~l~~~l~~l~~~~~pv~ciV~D~~~~wa~dvA~~lgIP~~~f~t~~a~~~~~~~~~~~~--~-- 151 (455)
T PLN02152 77 -DVQNRLVNFERNGDKALSDFIEANLNGDSPVTCLIYTILPNWAPKVARRFHLPSVLLWIQPAFVFDIYYNYSTG--N-- 151 (455)
T ss_pred -cHHHHHHHHHHhccHHHHHHHHHhhccCCCceEEEECCccHhHHHHHHHhCCCEEEEECccHHHHHHHHHhhcc--C--
Confidence 223344444445556666666542 34 9999999999999999999999999999999998877654200 0
Q ss_pred CCCCCCCcccCCCcccccccccccchhhhhhhhhhhcCCcccchhhhhhhcccc--CCcEEEEcCcCccChHHHHHHHhh
Q 011765 160 DHLKTPEDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLK--GCDIVAVRSCMEFEPEWLKLLEQL 237 (478)
Q Consensus 160 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~ns~~~le~~~~~~~~~~ 237 (478)
. ....+|... .++..+++.+...............+..+... .++++++|||++||+..++.+..
T Consensus 152 ---------~-~~~~iPglp--~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~- 218 (455)
T PLN02152 152 ---------N-SVFEFPNLP--SLEIRDLPSFLSPSNTNKAAQAVYQELMEFLKEESNPKILVNTFDSLEPEFLTAIPN- 218 (455)
T ss_pred ---------C-CeeecCCCC--CCchHHCchhhcCCCCchhHHHHHHHHHHHhhhccCCEEEEeChHHhhHHHHHhhhc-
Confidence 0 011122211 12222222222100000001122222333222 24799999999999999988865
Q ss_pred cCCCeeeeccCCCCCC--CCC-C--CCCCCChhhHhhhcccCCCCceEEEEeCcccCCCHHHHHHHHHHHHhCCCCEEEE
Q 011765 238 HRKPVIPVGQLPTTTG--DGD-S--DAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELSKLPFFWV 312 (478)
Q Consensus 238 ~~~~~~~vGp~~~~~~--~~~-~--~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~ 312 (478)
.+++.|||+..... ... . ......+.++.+||+.++++++|||||||...++.+++.+++.+|+.++.+|||+
T Consensus 219 --~~v~~VGPL~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flWv 296 (455)
T PLN02152 219 --IEMVAVGPLLPAEIFTGSESGKDLSVRDQSSSYTLWLDSKTESSVIYVSFGTMVELSKKQIEELARALIEGKRPFLWV 296 (455)
T ss_pred --CCEEEEcccCccccccccccCccccccccchHHHHHhhCCCCCceEEEEecccccCCHHHHHHHHHHHHHcCCCeEEE
Confidence 25999999974321 000 0 0001223579999999988899999999999999999999999999999999999
Q ss_pred EecCCCCC----CCC--CCCCChhhhhhcCCCcEEEeccCChhhhhcCCCceeeeeccChhhHHHHHHhCCcEecccccc
Q 011765 313 LKKRLGQA----DTE--PIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYA 386 (478)
Q Consensus 313 ~~~~~~~~----~~~--~~~~p~~~~~~~~~~n~~~~~~vpq~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~ 386 (478)
++...... .+. ...+|+++.++.+. |.++.+|+||.+||+|+++++|||||||||++||+++|||+|++|++.
T Consensus 297 ~r~~~~~~~~~~~~~~~~~~~~~~f~e~~~~-~g~v~~W~PQ~~iL~h~~vg~fvtH~G~nS~~Ea~~~GvP~l~~P~~~ 375 (455)
T PLN02152 297 ITDKLNREAKIEGEEETEIEKIAGFRHELEE-VGMIVSWCSQIEVLRHRAVGCFVTHCGWSSSLESLVLGVPVVAFPMWS 375 (455)
T ss_pred EecCcccccccccccccccccchhHHHhccC-CeEEEeeCCHHHHhCCcccceEEeeCCcccHHHHHHcCCCEEeccccc
Confidence 98532100 001 11246788877654 456669999999999999999999999999999999999999999999
Q ss_pred chhhHHHHHhhc-CeEEEeeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhc----ccCChHHHHHHHHHH
Q 011765 387 DQGLNAKLLEEK-QIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFG----DKGRHDRYVDNFLNY 461 (478)
Q Consensus 387 DQ~~na~~v~~~-g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~----~~~~~~~~~~~i~~~ 461 (478)
||+.||+++++. |+|+.+.... ++.++.++|+++|+++|+++ +.+||+|+++|+++.+ .++++.++++.+++.
T Consensus 376 DQ~~na~~~~~~~~~G~~~~~~~-~~~~~~e~l~~av~~vm~~~-~~~~r~~a~~~~~~~~~a~~~ggsS~~nl~~li~~ 453 (455)
T PLN02152 376 DQPANAKLLEEIWKTGVRVRENS-EGLVERGEIRRCLEAVMEEK-SVELRESAEKWKRLAIEAGGEGGSSDKNVEAFVKT 453 (455)
T ss_pred cchHHHHHHHHHhCceEEeecCc-CCcCcHHHHHHHHHHHHhhh-HHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 999999999984 6666664322 33479999999999999732 4679999998888765 567788999998886
Q ss_pred H
Q 011765 462 L 462 (478)
Q Consensus 462 ~ 462 (478)
+
T Consensus 454 i 454 (455)
T PLN02152 454 L 454 (455)
T ss_pred h
Confidence 5
|
|
| >PLN00164 glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-58 Score=459.21 Aligned_cols=439 Identities=25% Similarity=0.342 Sum_probs=317.4
Q ss_pred ccEEEEecCCCccCHHHHHHHHHHHHhCC----CeEEEEeCCCccc----cCCCCCC---CCCCCeEEEEecCCCCCCCC
Q 011765 6 KLQIAMFPWLAFGHMIPWLELAKLIAQKG----HKIFFISTPRNID----RLPRLPQ---NLASMIQFVKISLPHVDNLR 74 (478)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~La~~L~~rG----h~Vt~~~~~~~~~----~~~~~g~---~~~~~i~~~~i~~~~~~~l~ 74 (478)
|.||+++|++++||++|++.||+.|+.+| +.|||++++.... .+...-. .....+.+..+|++. ++
T Consensus 3 ~~HVVlvPfpaqGHi~P~l~LAk~La~~g~~~~~~vT~~~t~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~---~p 79 (480)
T PLN00164 3 APTVVLLPVWGSGHLMSMLEAGKRLLASSGGGALSLTVLVMPPPTPESASEVAAHVRREAASGLDIRFHHLPAVE---PP 79 (480)
T ss_pred CCEEEEeCCcchhHHHHHHHHHHHHHhCCCCCcEEEEEEEcCCCccchhHHHHHHHhhcccCCCCEEEEECCCCC---CC
Confidence 45999999999999999999999999996 7999999876532 1111000 001248999998432 22
Q ss_pred CCccccCCCChhHHHHHHHHHhhhhHHHHHHHhhc--CCCEEEEcCCcccHHHHHHHhCCCeEEEecchHHHHHhhcccc
Q 011765 75 ENAEATIDLPYDEVKYLKQSFDCLEEPMAKLLQSL--APDWLLFDFAAYWLPARARELGIPSGFFSIFTAATLGYFGPSS 152 (478)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~--~pD~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~ 152 (478)
.+.. ....++......+.+.+.+++++. .++|||+|.+.+|+..+|+++|||.+.|+++++..+..+.+..
T Consensus 80 ~~~e-------~~~~~~~~~~~~~~~~l~~~L~~l~~pv~cIV~D~f~~Wa~dVA~elgIP~v~F~t~sA~~~~~~~~~~ 152 (480)
T PLN00164 80 TDAA-------GVEEFISRYIQLHAPHVRAAIAGLSCPVAALVVDFFCTPLLDVARELAVPAYVYFTSTAAMLALMLRLP 152 (480)
T ss_pred Cccc-------cHHHHHHHHHHhhhHHHHHHHHhcCCCceEEEECCcchhHHHHHHHhCCCEEEEECccHHHHHHHhhhh
Confidence 2211 111344445556677788887765 4599999999999999999999999999999999988777653
Q ss_pred ccccccCCCCCCCCcccCCCcccccccccccchhhhhhhhhhhcCCcccchhhhhhhccccCCcEEEEcCcCccChHHHH
Q 011765 153 VLINDSGDHLKTPEDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLK 232 (478)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~ 232 (478)
...+....+ . .....+ ..+|+.. .++...++.... ......+.......+...+++++++|||++||+..++
T Consensus 153 ~~~~~~~~~-~--~~~~~~-~~iPGlp--~l~~~dlp~~~~--~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~ 224 (480)
T PLN00164 153 ALDEEVAVE-F--EEMEGA-VDVPGLP--PVPASSLPAPVM--DKKSPNYAWFVYHGRRFMEAAGIIVNTAAELEPGVLA 224 (480)
T ss_pred hhcccccCc-c--cccCcc-eecCCCC--CCChHHCCchhc--CCCcHHHHHHHHHHHhhhhcCEEEEechHHhhHHHHH
Confidence 211110000 0 000000 0122111 122222222111 0000111122222334567899999999999999999
Q ss_pred HHHhhc------CCCeeeeccCCCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccCCCHHHHHHHHHHHHhCC
Q 011765 233 LLEQLH------RKPVIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELSK 306 (478)
Q Consensus 233 ~~~~~~------~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~ 306 (478)
.++... .++++.|||+........ ....++++.+||+.++++++|||||||....+.+++.+++.+|+.++
T Consensus 225 ~~~~~~~~~~~~~~~v~~vGPl~~~~~~~~---~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~q~~ela~gL~~s~ 301 (480)
T PLN00164 225 AIADGRCTPGRPAPTVYPIGPVISLAFTPP---AEQPPHECVRWLDAQPPASVVFLCFGSMGFFDAPQVREIAAGLERSG 301 (480)
T ss_pred HHHhccccccCCCCceEEeCCCccccccCC---CccchHHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHHHcC
Confidence 887642 147999999974221110 02345679999999988999999999998889999999999999999
Q ss_pred CCEEEEEecCCCC------CCCCCCCCChhhhhhcCCCcEEEeccCChhhhhcCCCceeeeeccChhhHHHHHHhCCcEe
Q 011765 307 LPFFWVLKKRLGQ------ADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLI 380 (478)
Q Consensus 307 ~~~i~~~~~~~~~------~~~~~~~~p~~~~~~~~~~n~~~~~~vpq~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l 380 (478)
.+|||+++..... +.+....+|+++.++.+.+++++.+|+||.+||+|+++++|||||||||++||+++|||||
T Consensus 302 ~~flWv~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~PQ~~iL~h~~vg~fvtH~GwnS~~Eai~~GVP~l 381 (480)
T PLN00164 302 HRFLWVLRGPPAAGSRHPTDADLDELLPEGFLERTKGRGLVWPTWAPQKEILAHAAVGGFVTHCGWNSVLESLWHGVPMA 381 (480)
T ss_pred CCEEEEEcCCcccccccccccchhhhCChHHHHHhcCCCeEEeecCCHHHHhcCcccCeEEeecccchHHHHHHcCCCEE
Confidence 9999999854210 0001224889999999999999999999999999999999999999999999999999999
Q ss_pred ccccccchhhHHHHHh-hcCeEEEeeccCC-CCcccHHHHHHHHHHHhccc--chHHHHHHHHHHHHHhc----ccCChH
Q 011765 381 VLTCYADQGLNAKLLE-EKQIVELIPRDEG-DGFFTRNSVAESLRLVLVEE--KGQIYRDKAKEMKGLFG----DKGRHD 452 (478)
Q Consensus 381 ~~P~~~DQ~~na~~v~-~~g~G~~l~~~~~-~~~~~~~~l~~~i~~ll~~~--~~~~~~~~a~~~~~~~~----~~~~~~ 452 (478)
++|+++||+.||++++ ++|+|+.+...++ ++.+++++|+++|+++|.++ +.+.+|++|++|++..+ ++|++.
T Consensus 382 ~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~~~~~~~~~e~l~~av~~vm~~~~~~~~~~r~~a~~~~~~~~~a~~~gGSS~ 461 (480)
T PLN00164 382 PWPLYAEQHLNAFELVADMGVAVAMKVDRKRDNFVEAAELERAVRSLMGGGEEEGRKAREKAAEMKAACRKAVEEGGSSY 461 (480)
T ss_pred eCCccccchhHHHHHHHHhCeEEEeccccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhcCCCcHH
Confidence 9999999999999875 5799999964321 34579999999999999742 25789999999999876 567789
Q ss_pred HHHHHHHHHHHhc
Q 011765 453 RYVDNFLNYLKNH 465 (478)
Q Consensus 453 ~~~~~i~~~~~~~ 465 (478)
++++.+++.+.+.
T Consensus 462 ~~l~~~v~~~~~~ 474 (480)
T PLN00164 462 AALQRLAREIRHG 474 (480)
T ss_pred HHHHHHHHHHHhc
Confidence 9999999988643
|
|
| >PLN02554 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-58 Score=459.77 Aligned_cols=440 Identities=27% Similarity=0.392 Sum_probs=310.4
Q ss_pred ccEEEEecCCCccCHHHHHHHHHHHHhCC--CeEEEEeCCCccccC-------CCCCCCCCCCeEEEEecCCCCCCCCCC
Q 011765 6 KLQIAMFPWLAFGHMIPWLELAKLIAQKG--HKIFFISTPRNIDRL-------PRLPQNLASMIQFVKISLPHVDNLREN 76 (478)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~La~~L~~rG--h~Vt~~~~~~~~~~~-------~~~g~~~~~~i~~~~i~~~~~~~l~~~ 76 (478)
|+||+++|+|++||++|++.||+.|+.+| ..|||++++.+.... ........+.++++.+|++. ...
T Consensus 2 ~~hvvl~P~paqGHi~P~l~LAk~La~~G~~~~vT~v~t~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~----~~~ 77 (481)
T PLN02554 2 KIELVFIPSPGIGHLRPTVELAKLLVDSDDRLSITVIIIPSRSGDDASSSAYIASLSASSEDRLRYEVISAGD----QPT 77 (481)
T ss_pred ceEEEEeCCcchhhHHHHHHHHHHHHhCCCCEEEEEEeCCCccchhhhhhhhhhhcccCCCCCeEEEEcCCCC----CCc
Confidence 78999999999999999999999999998 889999998764321 10000001349999998432 111
Q ss_pred ccccCCCChhHHHHHHHHHhhhhHHHHHHHhh-----cCC-CEEEEcCCcccHHHHHHHhCCCeEEEecchHHHHHhhcc
Q 011765 77 AEATIDLPYDEVKYLKQSFDCLEEPMAKLLQS-----LAP-DWLLFDFAAYWLPARARELGIPSGFFSIFTAATLGYFGP 150 (478)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~-----~~p-D~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~ 150 (478)
. .. ......+......+.+.+.+++.. .+| +|||+|.+++|+..+|+++|||++.|++++++.+..+.+
T Consensus 78 ~----~~-~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~pv~cvV~D~f~~wa~dvA~~lgIP~~~F~t~sa~~~~~~~~ 152 (481)
T PLN02554 78 T----ED-PTFQSYIDNQKPKVRDAVAKLVDDSSTPSSPRLAGFVVDMFCTSMIDVANEFGVPSYMFYTSNATFLGLQLH 152 (481)
T ss_pred c----cc-hHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEECCcchhHHHHHHHhCCCEEEEeCCcHHHHHHHHh
Confidence 1 11 122333334444455566666543 134 899999999999999999999999999999999988776
Q ss_pred ccccccccCCCCCCCCcccCCCcccccccccccchhhhhhhhhhhcCCcccchhhhhhhccccCCcEEEEcCcCccChHH
Q 011765 151 SSVLINDSGDHLKTPEDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEW 230 (478)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~ 230 (478)
.....+....+.....+.. .+..+|... ..++...++... .. ...+....+....+.+++++++||+.+||+..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~-~~v~iPgl~-~pl~~~dlp~~~---~~-~~~~~~~~~~~~~~~~~~gvlvNt~~eLe~~~ 226 (481)
T PLN02554 153 VQMLYDEKKYDVSELEDSE-VELDVPSLT-RPYPVKCLPSVL---LS-KEWLPLFLAQARRFREMKGILVNTVAELEPQA 226 (481)
T ss_pred hhhhccccccCccccCCCC-ceeECCCCC-CCCCHHHCCCcc---cC-HHHHHHHHHHHHhcccCCEEEEechHHHhHHH
Confidence 5422211100000000000 001122210 011222221111 00 01122222333456678999999999999998
Q ss_pred HHHHHhh--cCCCeeeeccCCC-CCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccCCCHHHHHHHHHHHHhCCC
Q 011765 231 LKLLEQL--HRKPVIPVGQLPT-TTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELSKL 307 (478)
Q Consensus 231 ~~~~~~~--~~~~~~~vGp~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~ 307 (478)
...+.+. ..++++.|||+.. ...... ......+++.+||+.++++++|||||||+...+.+++.+++.+|+.+++
T Consensus 227 ~~~l~~~~~~~~~v~~vGpl~~~~~~~~~--~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~la~~l~~~~~ 304 (481)
T PLN02554 227 LKFFSGSSGDLPPVYPVGPVLHLENSGDD--SKDEKQSEILRWLDEQPPKSVVFLCFGSMGGFSEEQAREIAIALERSGH 304 (481)
T ss_pred HHHHHhcccCCCCEEEeCCCccccccccc--cccccchHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHHHHcCC
Confidence 8887753 3357999999943 221100 0022346799999999888999999999988899999999999999999
Q ss_pred CEEEEEecCCCC--------CCCCCCCCChhhhhhcCCCcEEEeccCChhhhhcCCCceeeeeccChhhHHHHHHhCCcE
Q 011765 308 PFFWVLKKRLGQ--------ADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPL 379 (478)
Q Consensus 308 ~~i~~~~~~~~~--------~~~~~~~~p~~~~~~~~~~n~~~~~~vpq~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~ 379 (478)
+|||+++..... ..+....+|+++.++... |.++.+|+||.+||+|+++++|||||||||++||+++||||
T Consensus 305 ~flW~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~r~~~-~g~v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Ea~~~GVP~ 383 (481)
T PLN02554 305 RFLWSLRRASPNIMKEPPGEFTNLEEILPEGFLDRTKD-IGKVIGWAPQVAVLAKPAIGGFVTHCGWNSILESLWFGVPM 383 (481)
T ss_pred CeEEEEcCCcccccccccccccchhhhCChHHHHHhcc-CceEEeeCCHHHHhCCcccCcccccCccchHHHHHHcCCCE
Confidence 999999753110 000112368898888754 45667999999999999999999999999999999999999
Q ss_pred eccccccchhhHH-HHHhhcCeEEEeecc-------CCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhc----c
Q 011765 380 IVLTCYADQGLNA-KLLEEKQIVELIPRD-------EGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFG----D 447 (478)
Q Consensus 380 l~~P~~~DQ~~na-~~v~~~g~G~~l~~~-------~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~----~ 447 (478)
|++|+++||+.|| ++++++|+|+.++.. .+.+.++.++|+++|+++|++ +++||+||+++++.++ +
T Consensus 384 l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~~~~~~~~~~~~~~~~~e~l~~av~~vm~~--~~~~r~~a~~l~~~~~~av~~ 461 (481)
T PLN02554 384 AAWPLYAEQKFNAFEMVEELGLAVEIRKYWRGDLLAGEMETVTAEEIERGIRCLMEQ--DSDVRKRVKEMSEKCHVALMD 461 (481)
T ss_pred EecCccccchhhHHHHHHHhCceEEeeccccccccccccCeEcHHHHHHHHHHHhcC--CHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999 458888999999641 002248999999999999963 5899999999999976 4
Q ss_pred cCChHHHHHHHHHHHHhc
Q 011765 448 KGRHDRYVDNFLNYLKNH 465 (478)
Q Consensus 448 ~~~~~~~~~~i~~~~~~~ 465 (478)
+|++.++++.+++.+.++
T Consensus 462 gGss~~~l~~lv~~~~~~ 479 (481)
T PLN02554 462 GGSSHTALKKFIQDVTKN 479 (481)
T ss_pred CChHHHHHHHHHHHHHhh
Confidence 577789999999998765
|
|
| >PLN02167 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-56 Score=447.91 Aligned_cols=445 Identities=24% Similarity=0.340 Sum_probs=302.1
Q ss_pred ccEEEEecCCCccCHHHHHHHHHHHHhCCC---eEEEEeCCCccc-----cCCCCCCCCCCCeEEEEecCCCCCCCCCCc
Q 011765 6 KLQIAMFPWLAFGHMIPWLELAKLIAQKGH---KIFFISTPRNID-----RLPRLPQNLASMIQFVKISLPHVDNLRENA 77 (478)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~La~~L~~rGh---~Vt~~~~~~~~~-----~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~ 77 (478)
+.||+++|+|++||++|++.||+.|+.+|. .||++++..... .+.... ...+++.|+.||++.. +...
T Consensus 3 ~~hVv~~PfpaqGHi~P~l~LAk~La~~G~~~t~vt~~~t~~~~~~~~~~~~~~~~-~~~~~i~~~~lp~~~~---p~~~ 78 (475)
T PLN02167 3 EAELIFVPFPSTGHILVTIEFAKRLINLDRRIHTITILYWSLPFAPQADAFLKSLI-ASEPRIRLVTLPEVQD---PPPM 78 (475)
T ss_pred ccEEEEeCChhhhhHHHHHHHHHHHHhCCCCeEEEEEEECCCCcchhhhHHHhhcc-cCCCCeEEEECCCCCC---Cccc
Confidence 569999999999999999999999999983 567766543221 111110 0113599999985331 1111
Q ss_pred cccCCCC-hhHHHHHHHHHhhhhHHHHHHHhhc------CCCEEEEcCCcccHHHHHHHhCCCeEEEecchHHHHHhhcc
Q 011765 78 EATIDLP-YDEVKYLKQSFDCLEEPMAKLLQSL------APDWLLFDFAAYWLPARARELGIPSGFFSIFTAATLGYFGP 150 (478)
Q Consensus 78 ~~~~~~~-~~~~~~~~~~~~~~~~~l~~ll~~~------~pD~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~ 150 (478)
....... ..+...+......+.+.+.+++.+. .++|||+|.+++|+..+|+++|||.+.|++++++.+..+++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~pv~cvV~D~f~~Wa~dVA~elgIP~v~F~t~~A~~~~~~~~ 158 (475)
T PLN02167 79 ELFVKASEAYILEFVKKMVPLVRDALSTLVSSRDESDSVRVAGLVLDFFCVPLIDVGNEFNLPSYIFLTCNAGFLGMMKY 158 (475)
T ss_pred cccccchHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCeEEEEECCccHHHHHHHHHhCCCEEEEECccHHHHHHHHH
Confidence 1000111 1222222222222333444443221 24999999999999999999999999999999988887664
Q ss_pred ccccccccCCCCCCCCcccCCCcccccccccccchhhhhhhhhhhcCCcccchhhhhhhccccCCcEEEEcCcCccChHH
Q 011765 151 SSVLINDSGDHLKTPEDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEW 230 (478)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~ 230 (478)
....... ............ +..+|+.. ..++...+..... .. ..+.......+...+++++++|||++||++.
T Consensus 159 ~~~~~~~-~~~~~~~~~~~~-~~~iPgl~-~~l~~~dlp~~~~--~~--~~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~ 231 (475)
T PLN02167 159 LPERHRK-TASEFDLSSGEE-ELPIPGFV-NSVPTKVLPPGLF--MK--ESYEAWVEIAERFPEAKGILVNSFTELEPNA 231 (475)
T ss_pred HHHhccc-cccccccCCCCC-eeECCCCC-CCCChhhCchhhh--Cc--chHHHHHHHHHhhcccCEeeeccHHHHHHHH
Confidence 3211110 000000000000 01122210 0012222221110 00 0111222333446678999999999999999
Q ss_pred HHHHHhhc--CCCeeeeccCCCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccCCCHHHHHHHHHHHHhCCCC
Q 011765 231 LKLLEQLH--RKPVIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELSKLP 308 (478)
Q Consensus 231 ~~~~~~~~--~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~ 308 (478)
++.++... -++++.|||+................+++.+||+.++++++|||||||....+.+++.+++.+|+.++.+
T Consensus 232 ~~~l~~~~~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~ela~~l~~~~~~ 311 (475)
T PLN02167 232 FDYFSRLPENYPPVYPVGPILSLKDRTSPNLDSSDRDRIMRWLDDQPESSVVFLCFGSLGSLPAPQIKEIAQALELVGCR 311 (475)
T ss_pred HHHHHhhcccCCeeEEeccccccccccCCCCCcchhHHHHHHHhcCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCc
Confidence 98886641 1479999999753221000000122367999999998889999999999888999999999999999999
Q ss_pred EEEEEecCCCCCCCCCCCCChhhhhhcCCCcEEEeccCChhhhhcCCCceeeeeccChhhHHHHHHhCCcEeccccccch
Q 011765 309 FFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQ 388 (478)
Q Consensus 309 ~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~n~~~~~~vpq~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ 388 (478)
|||+++.......+....+|+++.++.+.++ ++++|+||.+||+|+++++|||||||||++||+++|||||++|++.||
T Consensus 312 flw~~~~~~~~~~~~~~~lp~~~~er~~~rg-~v~~w~PQ~~iL~h~~vg~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ 390 (475)
T PLN02167 312 FLWSIRTNPAEYASPYEPLPEGFMDRVMGRG-LVCGWAPQVEILAHKAIGGFVSHCGWNSVLESLWFGVPIATWPMYAEQ 390 (475)
T ss_pred EEEEEecCcccccchhhhCChHHHHHhccCe-eeeccCCHHHHhcCcccCeEEeeCCcccHHHHHHcCCCEEeccccccc
Confidence 9999985321100013358999998887665 555999999999999999999999999999999999999999999999
Q ss_pred hhHHHH-HhhcCeEEEeecc---CCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhc----ccCChHHHHHHHHH
Q 011765 389 GLNAKL-LEEKQIVELIPRD---EGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFG----DKGRHDRYVDNFLN 460 (478)
Q Consensus 389 ~~na~~-v~~~g~G~~l~~~---~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~----~~~~~~~~~~~i~~ 460 (478)
+.||++ ++++|+|+.+... ++++.+++++|+++|+++|.+ ++.||+||+++++..+ ++|++.++++.|++
T Consensus 391 ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~l~~av~~~m~~--~~~~r~~a~~~~~~~~~av~~gGsS~~~l~~~v~ 468 (475)
T PLN02167 391 QLNAFTMVKELGLAVELRLDYVSAYGEIVKADEIAGAVRSLMDG--EDVPRKKVKEIAEAARKAVMDGGSSFVAVKRFID 468 (475)
T ss_pred hhhHHHHHHHhCeeEEeecccccccCCcccHHHHHHHHHHHhcC--CHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 999976 6788999998642 112347999999999999984 3489999999999865 66888999999999
Q ss_pred HHHh
Q 011765 461 YLKN 464 (478)
Q Consensus 461 ~~~~ 464 (478)
.+..
T Consensus 469 ~i~~ 472 (475)
T PLN02167 469 DLLG 472 (475)
T ss_pred HHHh
Confidence 8864
|
|
| >PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-51 Score=412.85 Aligned_cols=403 Identities=17% Similarity=0.177 Sum_probs=286.3
Q ss_pred ccEEEEe-cCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCCCCCCCCcccc----
Q 011765 6 KLQIAMF-PWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVDNLRENAEAT---- 80 (478)
Q Consensus 6 ~~~il~~-~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~~---- 80 (478)
..||+.+ |.++.||+.-+..|+++|++|||+||++++......-... ..+++.+.++.... .+.......
T Consensus 20 ~~kIl~~~P~~~~SH~~~~~~l~~~La~rGH~VTvi~p~~~~~~~~~~----~~~~~~i~~~~~~~-~~~~~~~~~~~~~ 94 (507)
T PHA03392 20 AARILAVFPTPAYSHHSVFKVYVEALAERGHNVTVIKPTLRVYYASHL----CGNITEIDASLSVE-YFKKLVKSSAVFR 94 (507)
T ss_pred cccEEEEcCCCCCcHHHHHHHHHHHHHHcCCeEEEEecccccccccCC----CCCEEEEEcCCChH-HHHHHHhhhhHHH
Confidence 4578865 8899999999999999999999999999776421110000 13366555431100 000000000
Q ss_pred --CCC--Chh----HHHHHHHHHhh-h-hHHHHHHHh--hcCCCEEEEcCCcccHHHHHHHh-CCCeEEEecchHHHHH-
Q 011765 81 --IDL--PYD----EVKYLKQSFDC-L-EEPMAKLLQ--SLAPDWLLFDFAAYWLPARAREL-GIPSGFFSIFTAATLG- 146 (478)
Q Consensus 81 --~~~--~~~----~~~~~~~~~~~-~-~~~l~~ll~--~~~pD~vI~D~~~~~~~~~A~~l-gIP~i~~~~~~~~~~~- 146 (478)
... ... ....+...|+. + .+.+.++++ +.++|+||+|.+..|+..+|+++ ++|+|.+++.......
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~kFDlvi~e~~~~c~~~la~~~~~~p~i~~ss~~~~~~~~ 174 (507)
T PHA03392 95 KRGVVADSSTVTADNYMGLVRMISDQFDLPNVKNLIANKNNKFDLLVTEAFLDYPLVFSHLFGDAPVIQISSGYGLAENF 174 (507)
T ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHHHCCHHHHHHHhcCCCceeEEEecccchhHHHHHHHhCCCCEEEEcCCCCchhHH
Confidence 000 000 01111223333 2 345677786 67899999999989999999999 9999888775443221
Q ss_pred -hhccccccccccCCCCCCCCcccCCCcccccc-----cccccchhhhhhhhh---------hhcCC----cccchh-hh
Q 011765 147 -YFGPSSVLINDSGDHLKTPEDYTRVPNWVSFP-----TTISYRLFEARKVFD---------ILISD----ESNVSH-GY 206 (478)
Q Consensus 147 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-----~~~~~~~~~~~~~~~---------~~~~~----~~~~~~-~~ 206 (478)
... +.+.+++|+|.. ..+++..+-.+.+.. ..... ...++. ..
T Consensus 175 ~~~g-----------------g~p~~~syvP~~~~~~~~~Msf~~R~~N~~~~~~~~~~~~~~~~~~~~l~~~~f~~~~~ 237 (507)
T PHA03392 175 ETMG-----------------AVSRHPVYYPNLWRSKFGNLNVWETINEIYTELRLYNEFSLLADEQNKLLKQQFGPDTP 237 (507)
T ss_pred Hhhc-----------------cCCCCCeeeCCcccCCCCCCCHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHcCCCCC
Confidence 111 122355566533 222332222221110 00000 011111 22
Q ss_pred hhhccccCCcEEEEcCcCccChHHHHHHHhhcCCCeeeeccCCCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCc
Q 011765 207 RFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLHRKPVIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGS 286 (478)
Q Consensus 207 ~~~~~~~~~~~~l~ns~~~le~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs 286 (478)
.+.+..++.+++++|+...++++ .++++++++|||+..+.... .+.++++.+|++..+ +++|||||||
T Consensus 238 ~~~~l~~~~~l~lvns~~~~d~~------rp~~p~v~~vGgi~~~~~~~-----~~l~~~l~~fl~~~~-~g~V~vS~GS 305 (507)
T PHA03392 238 TIRELRNRVQLLFVNVHPVFDNN------RPVPPSVQYLGGLHLHKKPP-----QPLDDYLEEFLNNST-NGVVYVSFGS 305 (507)
T ss_pred CHHHHHhCCcEEEEecCccccCC------CCCCCCeeeecccccCCCCC-----CCCCHHHHHHHhcCC-CcEEEEECCC
Confidence 34556677899999999999886 57889999999998743221 456788999998865 5799999999
Q ss_pred ccC---CCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCCCCChhhhhhcCCCcEEEeccCChhhhhcCCCceeeeec
Q 011765 287 EAK---PSQEELTEIALGLELSKLPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTH 363 (478)
Q Consensus 287 ~~~---~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~n~~~~~~vpq~~vL~~~~~~~~ItH 363 (478)
... .+.+.+..+++++++.+.+|||+++.... ...+|+ |+++.+|+||.++|+|+.+++||||
T Consensus 306 ~~~~~~~~~~~~~~~l~a~~~l~~~viw~~~~~~~-----~~~~p~---------Nv~i~~w~Pq~~lL~hp~v~~fItH 371 (507)
T PHA03392 306 SIDTNDMDNEFLQMLLRTFKKLPYNVLWKYDGEVE-----AINLPA---------NVLTQKWFPQRAVLKHKNVKAFVTQ 371 (507)
T ss_pred CCcCCCCCHHHHHHHHHHHHhCCCeEEEEECCCcC-----cccCCC---------ceEEecCCCHHHHhcCCCCCEEEec
Confidence 864 46788999999999999999999875311 123454 9999999999999999999999999
Q ss_pred cChhhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHH
Q 011765 364 AGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKG 443 (478)
Q Consensus 364 gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~ 443 (478)
||+||++||+++|||+|++|++.||+.||+|++++|+|+.++..+ ++.++|.++|+++++ |++|++||+++++
T Consensus 372 GG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~G~G~~l~~~~----~t~~~l~~ai~~vl~---~~~y~~~a~~ls~ 444 (507)
T PHA03392 372 GGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIGRALDTVT----VSAAQLVLAIVDVIE---NPKYRKNLKELRH 444 (507)
T ss_pred CCcccHHHHHHcCCCEEECCCCccHHHHHHHHHHcCcEEEeccCC----cCHHHHHHHHHHHhC---CHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999887 999999999999999 8999999999999
Q ss_pred HhcccC--ChHHHHHHHHHHHH
Q 011765 444 LFGDKG--RHDRYVDNFLNYLK 463 (478)
Q Consensus 444 ~~~~~~--~~~~~~~~i~~~~~ 463 (478)
.+++++ +.++++..++..++
T Consensus 445 ~~~~~p~~~~~~av~~iE~v~r 466 (507)
T PHA03392 445 LIRHQPMTPLHKAIWYTEHVIR 466 (507)
T ss_pred HHHhCCCCHHHHHHHHHHHHHh
Confidence 999887 56788876666554
|
|
| >PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-53 Score=435.66 Aligned_cols=389 Identities=25% Similarity=0.326 Sum_probs=236.8
Q ss_pred EEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCCC-CCCCCcccc-----C
Q 011765 8 QIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVD-NLRENAEAT-----I 81 (478)
Q Consensus 8 ~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~-~l~~~~~~~-----~ 81 (478)
|||++|+ ++||+.++..|+++|++|||+||++++...... ...+ ..++++..++.+... ......... .
T Consensus 2 kvLv~p~-~~SH~~~~~~l~~~L~~rGH~VTvl~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (500)
T PF00201_consen 2 KVLVFPM-AYSHFIFMRPLAEELAERGHNVTVLTPSPSSSL-NPSK---PSNIRFETYPDPYPEEEFEEIFPEFISKFFS 76 (500)
T ss_dssp -----------SHHHHHHHHHHHHHH-TTSEEEHHHHHHT----------S-CCEEEE-----TT------TTHHHHHHH
T ss_pred EEEEeCC-CcCHHHHHHHHHHHHHhcCCceEEEEeeccccc-cccc---ccceeeEEEcCCcchHHHhhhhHHHHHHHhh
Confidence 7888885 789999999999999999999999998653321 1111 134666666532211 111110000 0
Q ss_pred -CCC-hhHHHHH---HHHHhhhh---------HHHHHHHhhcCCCEEEEcCCcccHHHHHHHhCCCeEEEecchHHHHHh
Q 011765 82 -DLP-YDEVKYL---KQSFDCLE---------EPMAKLLQSLAPDWLLFDFAAYWLPARARELGIPSGFFSIFTAATLGY 147 (478)
Q Consensus 82 -~~~-~~~~~~~---~~~~~~~~---------~~l~~ll~~~~pD~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~~~~~~ 147 (478)
... ......+ ........ +.+.+.+++.++|++|+|.+.+|+..+|+.++||.+.+.+..+....
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~C~~~l~d~~l~~~l~~~~fDlvI~d~f~~c~~~la~~l~iP~i~~~s~~~~~~~- 155 (500)
T PF00201_consen 77 ESSFANSFWEMFKMLNAFFDFFSKSCEDLLSDPELMEQLKSEKFDLVISDAFDPCGLALAHYLGIPVIIISSSTPMYDL- 155 (500)
T ss_dssp HHCCHHHHHHHHHHHHCHHHS----E--EEEETTSTTHHHHHHHCT-EEEEEESSHHHHHHHHHHTHHHHHHCCSCSCC-
T ss_pred hcccchhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhccccceEeeccchhHHHHHHhcCCeEEEecccccchh-
Confidence 000 0011111 11111111 22334455568999999999999999999999999876442221110
Q ss_pred hccccccccccCCCCCCCCcccCCCcccccc-----cccccchhhhhhh--------hh-hhcC---Cc-ccchhhhhhh
Q 011765 148 FGPSSVLINDSGDHLKTPEDYTRVPNWVSFP-----TTISYRLFEARKV--------FD-ILIS---DE-SNVSHGYRFG 209 (478)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-----~~~~~~~~~~~~~--------~~-~~~~---~~-~~~~~~~~~~ 209 (478)
.....+.+.++++.|.. ..+++..+-.+.+ .. .... .. ..........
T Consensus 156 --------------~~~~~g~p~~psyvP~~~s~~~~~msf~~Ri~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (500)
T PF00201_consen 156 --------------SSFSGGVPSPPSYVPSMFSDFSDRMSFWQRIKNFLFYLYFRFIFRYFFSPQDKLYKKYFGFPFSFR 221 (500)
T ss_dssp --------------TCCTSCCCTSTTSTTCBCCCSGTTSSSST--TTSHHHHHHHHHHHHGGGS-TTS-EEESS-GGGCH
T ss_pred --------------hhhccCCCCChHHhccccccCCCccchhhhhhhhhhhhhhccccccchhhHHHHHhhhcccccccH
Confidence 01111333445555532 1222222111111 11 1111 11 1112222344
Q ss_pred ccccCCcEEEEcCcCccChHHHHHHHhhcCCCeeeeccCCCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccC
Q 011765 210 QSLKGCDIVAVRSCMEFEPEWLKLLEQLHRKPVIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAK 289 (478)
Q Consensus 210 ~~~~~~~~~l~ns~~~le~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~ 289 (478)
+.+...+.+++|+...++.+ .+.+|++++||++..... .+.++++..|++...++++|||||||...
T Consensus 222 ~~~~~~~l~l~ns~~~ld~p------rp~~p~v~~vGgl~~~~~-------~~l~~~~~~~~~~~~~~~vv~vsfGs~~~ 288 (500)
T PF00201_consen 222 ELLSNASLVLINSHPSLDFP------RPLLPNVVEVGGLHIKPA-------KPLPEELWNFLDSSGKKGVVYVSFGSIVS 288 (500)
T ss_dssp HHHHHHHHCCSSTEEE----------HHHHCTSTTGCGC-S-----------TCHHHHHHHTSTTTTTEEEEEE-TSSST
T ss_pred HHHHHHHHHhhhccccCcCC------cchhhcccccCccccccc-------cccccccchhhhccCCCCEEEEecCcccc
Confidence 44556788899998888765 345568999999986543 56688899999985667899999999986
Q ss_pred CCH-HHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCCCCChhhhhhcCCCcEEEeccCChhhhhcCCCceeeeeccChhh
Q 011765 290 PSQ-EELTEIALGLELSKLPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSS 368 (478)
Q Consensus 290 ~~~-~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~n~~~~~~vpq~~vL~~~~~~~~ItHgG~~s 368 (478)
..+ +....+++++++++.+|||++++. ....+|+ |+++.+|+||.+||+|+++++||||||+||
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~iW~~~~~------~~~~l~~---------n~~~~~W~PQ~~lL~hp~v~~fitHgG~~s 353 (500)
T PF00201_consen 289 SMPEEKLKEIAEAFENLPQRFIWKYEGE------PPENLPK---------NVLIVKWLPQNDLLAHPRVKLFITHGGLNS 353 (500)
T ss_dssp T-HHHHHHHHHHHHHCSTTEEEEEETCS------HGCHHHT---------TEEEESS--HHHHHTSTTEEEEEES--HHH
T ss_pred hhHHHHHHHHHHHHhhCCCccccccccc------ccccccc---------eEEEeccccchhhhhcccceeeeeccccch
Confidence 444 557889999999999999999753 2233443 899999999999999999999999999999
Q ss_pred HHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhccc
Q 011765 369 VVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFGDK 448 (478)
Q Consensus 369 ~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~ 448 (478)
++||+++|||||++|+++||+.||++++++|+|+.++..+ +|.++|.++|+++|+ |++|++||++++++++++
T Consensus 354 ~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~G~g~~l~~~~----~~~~~l~~ai~~vl~---~~~y~~~a~~ls~~~~~~ 426 (500)
T PF00201_consen 354 TQEALYHGVPMLGIPLFGDQPRNAARVEEKGVGVVLDKND----LTEEELRAAIREVLE---NPSYKENAKRLSSLFRDR 426 (500)
T ss_dssp HHHHHHCT--EEE-GCSTTHHHHHHHHHHTTSEEEEGGGC-----SHHHHHHHHHHHHH---SHHHHHHHHHHHHTTT--
T ss_pred hhhhhhccCCccCCCCcccCCccceEEEEEeeEEEEEecC----CcHHHHHHHHHHHHh---hhHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999988 999999999999999 899999999999999987
Q ss_pred CCh
Q 011765 449 GRH 451 (478)
Q Consensus 449 ~~~ 451 (478)
+.+
T Consensus 427 p~~ 429 (500)
T PF00201_consen 427 PIS 429 (500)
T ss_dssp ---
T ss_pred CCC
Confidence 644
|
This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A .... |
| >TIGR01426 MGT glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-45 Score=365.58 Aligned_cols=388 Identities=19% Similarity=0.218 Sum_probs=267.3
Q ss_pred ecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCCC-CCCCCccccCCCChhHHHH
Q 011765 12 FPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVD-NLRENAEATIDLPYDEVKY 90 (478)
Q Consensus 12 ~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~-~l~~~~~~~~~~~~~~~~~ 90 (478)
+.+|++||++|++.||++|++|||+|+|++++.+.+.++..| +.|..++..... ..... ............
T Consensus 1 ~~~p~~Ghv~P~l~lA~~L~~~Gh~V~~~~~~~~~~~v~~~G------~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 72 (392)
T TIGR01426 1 FNIPAHGHVNPTLGVVEELVARGHRVTYATTEEFAERVEAAG------AEFVLYGSALPPPDNPPE--NTEEEPIDIIEK 72 (392)
T ss_pred CCCCccccccccHHHHHHHHhCCCeEEEEeCHHHHHHHHHcC------CEEEecCCcCcccccccc--ccCcchHHHHHH
Confidence 468999999999999999999999999999999999999988 898888732111 00000 000111223333
Q ss_pred HHHHHhhhhHHHHHHHhhcCCCEEEEcCCcccHHHHHHHhCCCeEEEecchHHHHHhhccccccccccCCCCCCCCcccC
Q 011765 91 LKQSFDCLEEPMAKLLQSLAPDWLLFDFAAYWLPARARELGIPSGFFSIFTAATLGYFGPSSVLINDSGDHLKTPEDYTR 170 (478)
Q Consensus 91 ~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (478)
+......+.+.+.+++++.+||+||+|.+++++..+|+.+|||+|.+++....... +.++. + +.
T Consensus 73 ~~~~~~~~~~~l~~~~~~~~pDlVi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~-~~~~~--------~-------~~ 136 (392)
T TIGR01426 73 LLDEAEDVLPQLEEAYKGDRPDLIVYDIASWTGRLLARKWDVPVISSFPTFAANEE-FEEMV--------S-------PA 136 (392)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHhCCCEEEEehhhccccc-ccccc--------c-------cc
Confidence 33333334455667777889999999998889999999999999988654321100 00000 0 00
Q ss_pred CCcccccccccc-cchhhhhhhhhhhcCCcccchhhhhhhccccCCcEEEEcCcCccChHHHHHHHhhcCCCeeeeccCC
Q 011765 171 VPNWVSFPTTIS-YRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLHRKPVIPVGQLP 249 (478)
Q Consensus 171 ~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~~~~~~~~~~~vGp~~ 249 (478)
............ ........+..++...+........+. ....+..+..+...|+ ..+..++++++++||+.
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~gl~~~~~~~~~--~~~~~~~l~~~~~~l~-----~~~~~~~~~~~~~Gp~~ 209 (392)
T TIGR01426 137 GEGSAEEGAIAERGLAEYVARLSALLEEHGITTPPVEFLA--APRRDLNLVYTPKAFQ-----PAGETFDDSFTFVGPCI 209 (392)
T ss_pred chhhhhhhccccchhHHHHHHHHHHHHHhCCCCCCHHHHh--cCCcCcEEEeCChHhC-----CCccccCCCeEEECCCC
Confidence 000000000000 000001112222222211111111111 1223334555533333 33567888999999987
Q ss_pred CCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccCCCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCCCCCh
Q 011765 250 TTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELSKLPFFWVLKKRLGQADTEPIELPD 329 (478)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~ 329 (478)
..... ...|.....++++||||+||........+..+++++++.+.+++|..+..... +....+
T Consensus 210 ~~~~~------------~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~g~~~~~--~~~~~~-- 273 (392)
T TIGR01426 210 GDRKE------------DGSWERPGDGRPVVLISLGTVFNNQPSFYRTCVEAFRDLDWHVVLSVGRGVDP--ADLGEL-- 273 (392)
T ss_pred CCccc------------cCCCCCCCCCCCEEEEecCccCCCCHHHHHHHHHHHhcCCCeEEEEECCCCCh--hHhccC--
Confidence 54321 12366666678899999999876666788889999999999998887643110 011122
Q ss_pred hhhhhcCCCcEEEeccCChhhhhcCCCceeeeeccChhhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeeccCC
Q 011765 330 GFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEG 409 (478)
Q Consensus 330 ~~~~~~~~~n~~~~~~vpq~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~ 409 (478)
.+|+.+..|+|+.++|+++++ +|||||+||++||+++|+|+|++|...||+.||++++++|+|..+...+
T Consensus 274 -------~~~v~~~~~~p~~~ll~~~~~--~I~hgG~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~g~g~~l~~~~- 343 (392)
T TIGR01426 274 -------PPNVEVRQWVPQLEILKKADA--FITHGGMNSTMEALFNGVPMVAVPQGADQPMTARRIAELGLGRHLPPEE- 343 (392)
T ss_pred -------CCCeEEeCCCCHHHHHhhCCE--EEECCCchHHHHHHHhCCCEEecCCcccHHHHHHHHHHCCCEEEecccc-
Confidence 348999999999999999888 9999999999999999999999999999999999999999999998776
Q ss_pred CCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhcccCChHHHHHHHHHHH
Q 011765 410 DGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYL 462 (478)
Q Consensus 410 ~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~ 462 (478)
+++++|.++|+++|+ |++|+++++++++.+...++.+++++.|++.+
T Consensus 344 ---~~~~~l~~ai~~~l~---~~~~~~~~~~l~~~~~~~~~~~~aa~~i~~~~ 390 (392)
T TIGR01426 344 ---VTAEKLREAVLAVLS---DPRYAERLRKMRAEIREAGGARRAADEIEGFL 390 (392)
T ss_pred ---CCHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHhh
Confidence 899999999999999 89999999999999999999999999888765
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. |
| >cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-45 Score=362.90 Aligned_cols=380 Identities=16% Similarity=0.117 Sum_probs=259.4
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCCCCCCCCc---ccc---
Q 011765 7 LQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVDNLRENA---EAT--- 80 (478)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~---~~~--- 80 (478)
|||+|+++|+.||++|++.||++|++|||+|+|++++.+...++..| ++|.+++. ...... ...
T Consensus 1 mrIl~~~~p~~GHv~P~l~la~~L~~rGh~V~~~t~~~~~~~v~~~G------~~~~~~~~----~~~~~~~~~~~~~~~ 70 (401)
T cd03784 1 MRVLITTIGSRGDVQPLVALAWALRAAGHEVRVATPPEFADLVEAAG------LEFVPVGG----DPDELLASPERNAGL 70 (401)
T ss_pred CeEEEEeCCCcchHHHHHHHHHHHHHCCCeEEEeeCHhHHHHHHHcC------CceeeCCC----CHHHHHhhhhhcccc
Confidence 79999999999999999999999999999999999999999888887 88888862 211100 000
Q ss_pred ----CCCChhHHHHHHHHHhhhhHHHHHHHhhcCCCEEEEcCCcccHHHHHHHhCCCeEEEecchHHHHHhhcccccccc
Q 011765 81 ----IDLPYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAAYWLPARARELGIPSGFFSIFTAATLGYFGPSSVLIN 156 (478)
Q Consensus 81 ----~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~~ 156 (478)
..........+......+.+.+.+.+++.+||+||+|.+.+++..+|+++|||++.+++++........
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pDlvi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~------- 143 (401)
T cd03784 71 LLLGPGLLLGALRLLRREAEAMLDDLVAAARDWGPDLVVADPLAFAGAVAAEALGIPAVRLLLGPDTPTSAFP------- 143 (401)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCEEEeCcHHHHHHHHHHHhCCCeEEeecccCCccccCC-------
Confidence 001112223333444444555666667789999999998888899999999999999876543211110
Q ss_pred ccCCCCCCCCcccCCCcccccccccccchhhhhhhh--------hhhcCCcccchhhhhhhccccCCcEEEEcCcCccCh
Q 011765 157 DSGDHLKTPEDYTRVPNWVSFPTTISYRLFEARKVF--------DILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEP 228 (478)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~ 228 (478)
+.. ...............+. .....+ ++..... . ....+..+......
T Consensus 144 ---------------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--gl~~~~~-~--~~~~~~~~~~~~~~--- 199 (401)
T cd03784 144 ---------------PPL-GRANLRLYALLEAELWQDLLGAWLRARRRRL--GLPPLSL-L--DGSDVPELYGFSPA--- 199 (401)
T ss_pred ---------------Ccc-chHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCCCcc-c--ccCCCcEEEecCcc---
Confidence 000 00000000000000000 001111 1111000 0 01112222222111
Q ss_pred HHHHHHHhhcCCCeeeec-cCCCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccCCC-HHHHHHHHHHHHhCC
Q 011765 229 EWLKLLEQLHRKPVIPVG-QLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPS-QEELTEIALGLELSK 306 (478)
Q Consensus 229 ~~~~~~~~~~~~~~~~vG-p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~-~~~~~~~~~al~~~~ 306 (478)
+......++++..++| ++...... ...+.++..|++. ++++||||+||..... ...+..++++++..+
T Consensus 200 --~~~~~~~~~~~~~~~g~~~~~~~~~------~~~~~~~~~~~~~--~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~~ 269 (401)
T cd03784 200 --VLPPPPDWPRFDLVTGYGFRDVPYN------GPPPPELWLFLAA--GRPPVYVGFGSMVVRDPEALARLDVEAVATLG 269 (401)
T ss_pred --cCCCCCCccccCcEeCCCCCCCCCC------CCCCHHHHHHHhC--CCCcEEEeCCCCcccCHHHHHHHHHHHHHHcC
Confidence 1122355677777886 44433222 2335667788865 4679999999998644 466777999999899
Q ss_pred CCEEEEEecCCCCCCCCCCCCChhhhhhcCCCcEEEeccCChhhhhcCCCceeeeeccChhhHHHHHHhCCcEecccccc
Q 011765 307 LPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYA 386 (478)
Q Consensus 307 ~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~n~~~~~~vpq~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~ 386 (478)
.+++|+.+.... ..... ++|+++.+|+||.++|+++++ ||||||+||++||+++|||+|++|+..
T Consensus 270 ~~~i~~~g~~~~----~~~~~---------~~~v~~~~~~p~~~ll~~~d~--~I~hgG~~t~~eal~~GvP~v~~P~~~ 334 (401)
T cd03784 270 QRAILSLGWGGL----GAEDL---------PDNVRVVDFVPHDWLLPRCAA--VVHHGGAGTTAAALRAGVPQLVVPFFG 334 (401)
T ss_pred CeEEEEccCccc----cccCC---------CCceEEeCCCCHHHHhhhhhe--eeecCCchhHHHHHHcCCCEEeeCCCC
Confidence 999999875421 11122 349999999999999999888 999999999999999999999999999
Q ss_pred chhhHHHHHhhcCeEEEeeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhcccCChHHHHHHHHH
Q 011765 387 DQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLN 460 (478)
Q Consensus 387 DQ~~na~~v~~~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~ 460 (478)
||+.||++++++|+|+.++..+ +++++|.++|+++++ ++ ++++++++++.++..++..++++.|++
T Consensus 335 dQ~~~a~~~~~~G~g~~l~~~~----~~~~~l~~al~~~l~---~~-~~~~~~~~~~~~~~~~g~~~~~~~ie~ 400 (401)
T cd03784 335 DQPFWAARVAELGAGPALDPRE----LTAERLAAALRRLLD---PP-SRRRAAALLRRIREEDGVPSAADVIER 400 (401)
T ss_pred CcHHHHHHHHHCCCCCCCCccc----CCHHHHHHHHHHHhC---HH-HHHHHHHHHHHHHhccCHHHHHHHHhh
Confidence 9999999999999999998876 899999999999999 54 566777787887888888888877654
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
| >COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-44 Score=353.67 Aligned_cols=399 Identities=20% Similarity=0.244 Sum_probs=267.7
Q ss_pred ccEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCCCCCCCCccccCCCCh
Q 011765 6 KLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVDNLRENAEATIDLPY 85 (478)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~~~~~~~ 85 (478)
+|||+|+..|.+||++|+++||++|.++||+|+|++++.+.+.+++.| +.|..++.. ... ............
T Consensus 1 ~mkil~~~~~~~Ghv~p~~aL~~eL~~~gheV~~~~~~~~~~~ve~ag------~~f~~~~~~-~~~-~~~~~~~~~~~~ 72 (406)
T COG1819 1 RMKILFVVCGAYGHVNPCLALGKELRRRGHEVVFASTGKFKEFVEAAG------LAFVAYPIR-DSE-LATEDGKFAGVK 72 (406)
T ss_pred CceEEEEeccccccccchHHHHHHHHhcCCeEEEEeCHHHHHHHHHhC------cceeecccc-CCh-hhhhhhhhhccc
Confidence 599999999999999999999999999999999999999999999988 888888732 110 011111111111
Q ss_pred hHHHHHHHHHhhhhHHHHHHHhhcCCCEEEEcCCcccHHHHHHHhCCCeEEEecchHHHHHhhccccccccccCCCCCCC
Q 011765 86 DEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAAYWLPARARELGIPSGFFSIFTAATLGYFGPSSVLINDSGDHLKTP 165 (478)
Q Consensus 86 ~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (478)
.... ...........+.+++.+..||+++.|...+.+ .+++..++|++...............+. .+....
T Consensus 73 ~~~~-~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~ 143 (406)
T COG1819 73 SFRR-LLQQFKKLIRELLELLRELEPDLVVDDARLSLG-LAARLLGIPVVGINVAPYTPLPAAGLPL-------PPVGIA 143 (406)
T ss_pred hhHH-HhhhhhhhhHHHHHHHHhcchhhhhcchhhhhh-hhhhhcccchhhhhhhhccCCcccccCc-------cccccc
Confidence 1111 222222234466677888899999999776655 8899999999987555444332222111 000000
Q ss_pred CcccCCCcccccc--cccccchhhhhhhhhhhcCCcccch-hhhhhhccccCCcEEEEcCcCccChHHHHHHHhhcCCCe
Q 011765 166 EDYTRVPNWVSFP--TTISYRLFEARKVFDILISDESNVS-HGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLHRKPV 242 (478)
Q Consensus 166 ~~~~~~~~~~p~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~~~~~~~~~ 242 (478)
+....+...++.. .........+.... ..... .+. ...+....+.......+...+...++ ...+|-..
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~r~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~p~~~ 215 (406)
T COG1819 144 GKLPIPLYPLPPRLVRPLIFARSWLPKLV-VRRNL--GLELGLPNIRRLFASGPLLEIAYTDVLFPP-----GDRLPFIG 215 (406)
T ss_pred ccccccccccChhhccccccchhhhhhhh-hhhhc--cccccccchHHHhcCCCCccccccccccCC-----CCCCCCCc
Confidence 0000000001110 00011111000000 00000 000 00001111112222222222211111 02334456
Q ss_pred eeeccCCCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccCCCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCC
Q 011765 243 IPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELSKLPFFWVLKKRLGQADT 322 (478)
Q Consensus 243 ~~vGp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~ 322 (478)
.++||+...... ++..| ...++++||+|+||.... .+.+..+.++++.++.++|..... ...
T Consensus 216 ~~~~~~~~~~~~-----------~~~~~--~~~d~~~vyvslGt~~~~-~~l~~~~~~a~~~l~~~vi~~~~~-~~~--- 277 (406)
T COG1819 216 PYIGPLLGEAAN-----------ELPYW--IPADRPIVYVSLGTVGNA-VELLAIVLEALADLDVRVIVSLGG-ARD--- 277 (406)
T ss_pred Cccccccccccc-----------cCcch--hcCCCCeEEEEcCCcccH-HHHHHHHHHHHhcCCcEEEEeccc-ccc---
Confidence 677777655432 22233 334578999999999976 888999999999999999988865 211
Q ss_pred CCCCCChhhhhhcCCCcEEEeccCChhhhhcCCCceeeeeccChhhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEE
Q 011765 323 EPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVE 402 (478)
Q Consensus 323 ~~~~~p~~~~~~~~~~n~~~~~~vpq~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~ 402 (478)
...++|+ |+++.+|+||.++|+++++ ||||||+||++|||++|||+|++|...||+.||.|++++|+|.
T Consensus 278 ~~~~~p~---------n~~v~~~~p~~~~l~~ad~--vI~hGG~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~G~G~ 346 (406)
T COG1819 278 TLVNVPD---------NVIVADYVPQLELLPRADA--VIHHGGAGTTSEALYAGVPLVVIPDGADQPLNAERVEELGAGI 346 (406)
T ss_pred ccccCCC---------ceEEecCCCHHHHhhhcCE--EEecCCcchHHHHHHcCCCEEEecCCcchhHHHHHHHHcCCce
Confidence 3566776 9999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred EeeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHhc
Q 011765 403 LIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLKNH 465 (478)
Q Consensus 403 ~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~ 465 (478)
.++... ++.+.|+++|+++|+ ++.|+++++++++.+++.++...+++.|++..++.
T Consensus 347 ~l~~~~----l~~~~l~~av~~vL~---~~~~~~~~~~~~~~~~~~~g~~~~a~~le~~~~~~ 402 (406)
T COG1819 347 ALPFEE----LTEERLRAAVNEVLA---DDSYRRAAERLAEEFKEEDGPAKAADLLEEFAREK 402 (406)
T ss_pred ecCccc----CCHHHHHHHHHHHhc---CHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHhcc
Confidence 999987 999999999999999 99999999999999999999888888888766543
|
|
| >KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-41 Score=349.81 Aligned_cols=411 Identities=25% Similarity=0.365 Sum_probs=265.1
Q ss_pred ccEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCC-CCCCCCCCeEE---EEecCCCC-CCCCCCcccc
Q 011765 6 KLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPR-LPQNLASMIQF---VKISLPHV-DNLRENAEAT 80 (478)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~-~g~~~~~~i~~---~~i~~~~~-~~l~~~~~~~ 80 (478)
+.+++++++|++||++|+..||+.|+++||+||++++......... .. ...+.. ..+++... +.++......
T Consensus 5 ~~~~il~~~p~~sH~~~~~~la~~L~~~gh~vt~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (496)
T KOG1192|consen 5 KAHNILVPFPGQSHLNPMLQLAKRLAERGHNVTVVTPSFNALKLSKSSK---SKSIKKINPPPFEFLTIPDGLPEGWEDD 81 (496)
T ss_pred cceeEEEECCcccHHHHHHHHHHHHHHcCCceEEEEeechhcccCCccc---ceeeeeeecChHHhhhhhhhhccchHHH
Confidence 4688889999999999999999999999999999999877654432 11 000111 11111000 1111111100
Q ss_pred CCCChhHHHHHHHHHhh-hhHHHHHHH--hhcCCCEEEEcCCcccHHHHHHHhC-CCeEEEecchHHHHHhhcccccccc
Q 011765 81 IDLPYDEVKYLKQSFDC-LEEPMAKLL--QSLAPDWLLFDFAAYWLPARARELG-IPSGFFSIFTAATLGYFGPSSVLIN 156 (478)
Q Consensus 81 ~~~~~~~~~~~~~~~~~-~~~~l~~ll--~~~~pD~vI~D~~~~~~~~~A~~lg-IP~i~~~~~~~~~~~~~~~~~~~~~ 156 (478)
..........+...+.. +........ ...++|++|+|.+..+...++.... |+..++++..+.......+..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~g~~~~---- 157 (496)
T KOG1192|consen 82 DLDISESLLELNKTCEDLLRDPLEKLLLLKSEKFDLIISDPFLGLFLLLAIPSFVIPLLSFPTSSAVLLALGLPSP---- 157 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHhchHHHHHHhhcCCccEEEechhhHHHHHhcccceEEEeecccCchHHHHhcCCcCc----
Confidence 00000001122222222 222222222 2223999999998666666676664 888888887777665443222
Q ss_pred ccCCCCCCCCcccCCCccccccc------ccccchh-------hhhhhhh----------hhcCCc-ccchhhhhhhccc
Q 011765 157 DSGDHLKTPEDYTRVPNWVSFPT------TISYRLF-------EARKVFD----------ILISDE-SNVSHGYRFGQSL 212 (478)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~p~~~------~~~~~~~-------~~~~~~~----------~~~~~~-~~~~~~~~~~~~~ 212 (478)
..++|... .+.+..+ ....+.. ...... ..........+..
T Consensus 158 ---------------~~~~p~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 222 (496)
T KOG1192|consen 158 ---------------LSYVPSPFSLSSGDDMSFPERVPNLIKKDLPSFLFSLSDDRKQDKISKELLGDILNWKPTASGII 222 (496)
T ss_pred ---------------ccccCcccCccccccCcHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCCcccccccHHHhh
Confidence 11111110 0111100 0000000 000000 0001112233445
Q ss_pred cCCcEEEEcCcCccChHHHHHHHhhcCCCeeeeccCCCCCCCCCCCCCCCChhhHhhhcccCCCC--ceEEEEeCccc--
Q 011765 213 KGCDIVAVRSCMEFEPEWLKLLEQLHRKPVIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKG--SVVYVAFGSEA-- 288 (478)
Q Consensus 213 ~~~~~~l~ns~~~le~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~v~vs~Gs~~-- 288 (478)
...+..++|+...++.+ .....+++++|||+....... .. ....+|++..+.. ++|||||||..
T Consensus 223 ~~~~~~~ln~~~~~~~~-----~~~~~~~v~~IG~l~~~~~~~-----~~--~~~~~wl~~~~~~~~~vvyvSfGS~~~~ 290 (496)
T KOG1192|consen 223 VNASFIFLNSNPLLDFE-----PRPLLPKVIPIGPLHVKDSKQ-----KS--PLPLEWLDILDESRHSVVYISFGSMVNS 290 (496)
T ss_pred hcCeEEEEccCcccCCC-----CCCCCCCceEECcEEecCccc-----cc--cccHHHHHHHhhccCCeEEEECCccccc
Confidence 56667777776655542 233467899999999773321 11 1456677776554 79999999998
Q ss_pred -CCCHHHHHHHHHHHHhC-CCCEEEEEecCCCCCCCCCCCCChhhhhhcCCCcEEEeccCChhhh-hcCCCceeeeeccC
Q 011765 289 -KPSQEELTEIALGLELS-KLPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAI-LAHDSVGGFLTHAG 365 (478)
Q Consensus 289 -~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~n~~~~~~vpq~~v-L~~~~~~~~ItHgG 365 (478)
.++.++...++.+++++ +++|+|+++.... ..+++++.++ ...|+..++|+||.++ |+|+++++||||||
T Consensus 291 ~~lp~~~~~~l~~~l~~~~~~~FiW~~~~~~~------~~~~~~~~~~-~~~nV~~~~W~PQ~~lll~H~~v~~FvTHgG 363 (496)
T KOG1192|consen 291 ADLPEEQKKELAKALESLQGVTFLWKYRPDDS------IYFPEGLPNR-GRGNVVLSKWAPQNDLLLDHPAVGGFVTHGG 363 (496)
T ss_pred ccCCHHHHHHHHHHHHhCCCceEEEEecCCcc------hhhhhcCCCC-CcCceEEecCCCcHHHhcCCCcCcEEEECCc
Confidence 68899999999999999 8889999986422 1133333322 3458898899999998 59999999999999
Q ss_pred hhhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHh
Q 011765 366 WSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLF 445 (478)
Q Consensus 366 ~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~ 445 (478)
|||++|++++|||||++|+++||+.||+++++.|.|..+...+ ++...+..++.++++ +++|+++++++++.+
T Consensus 364 ~nSt~E~~~~GvP~v~~Plf~DQ~~Na~~i~~~g~~~v~~~~~----~~~~~~~~~~~~il~---~~~y~~~~~~l~~~~ 436 (496)
T KOG1192|consen 364 WNSTLESIYSGVPMVCVPLFGDQPLNARLLVRHGGGGVLDKRD----LVSEELLEAIKEILE---NEEYKEAAKRLSEIL 436 (496)
T ss_pred ccHHHHHHhcCCceecCCccccchhHHHHHHhCCCEEEEehhh----cCcHHHHHHHHHHHc---ChHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998888888877 677669999999999 899999999999999
Q ss_pred cccCChHHHHHHHHHHHHh
Q 011765 446 GDKGRHDRYVDNFLNYLKN 464 (478)
Q Consensus 446 ~~~~~~~~~~~~i~~~~~~ 464 (478)
++++.....+....++..+
T Consensus 437 ~~~p~~~~~~~~~~e~~~~ 455 (496)
T KOG1192|consen 437 RDQPISPELAVKWVEFVAR 455 (496)
T ss_pred HcCCCCHHHHHHHHHHHHh
Confidence 9888776444434454444
|
|
| >PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-25 Score=218.29 Aligned_cols=318 Identities=18% Similarity=0.170 Sum_probs=199.9
Q ss_pred EEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCccc--cCCCCCCCCCCCeEEEEecCCCCCCCCCCccccCCCCh
Q 011765 8 QIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNID--RLPRLPQNLASMIQFVKISLPHVDNLRENAEATIDLPY 85 (478)
Q Consensus 8 ~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~--~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~~~~~~~ 85 (478)
||+|.+.++-||++|.++||++|.++||+|+|+++..-.+ .+.+.| +.+..++. ..+. + ....
T Consensus 3 ~i~~~~GGTGGHi~Pala~a~~l~~~g~~v~~vg~~~~~e~~l~~~~g------~~~~~~~~---~~l~----~--~~~~ 67 (352)
T PRK12446 3 KIVFTGGGSAGHVTPNLAIIPYLKEDNWDISYIGSHQGIEKTIIEKEN------IPYYSISS---GKLR----R--YFDL 67 (352)
T ss_pred eEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEECCCccccccCcccC------CcEEEEec---cCcC----C--CchH
Confidence 6777777777999999999999999999999999776543 223333 77777752 1111 1 1111
Q ss_pred hHHHHHHHHHhhhhHHHHHHHhhcCCCEEEEcCC--cccHHHHHHHhCCCeEEEecchHHHHHhhccccccccccCCCCC
Q 011765 86 DEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFA--AYWLPARARELGIPSGFFSIFTAATLGYFGPSSVLINDSGDHLK 163 (478)
Q Consensus 86 ~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~--~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (478)
..+........... ....++++.+||+||...- ..++..+|..+++|++..-..
T Consensus 68 ~~~~~~~~~~~~~~-~~~~i~~~~kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i~e~n----------------------- 123 (352)
T PRK12446 68 KNIKDPFLVMKGVM-DAYVRIRKLKPDVIFSKGGFVSVPVVIGGWLNRVPVLLHESD----------------------- 123 (352)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHhcCCCEEEecCchhhHHHHHHHHHcCCCEEEECCC-----------------------
Confidence 11122222222222 3456789999999998752 234689999999999875221
Q ss_pred CCCcccCCCcccccccccccchhhhhhhhhhhcCCcccchhhhhhhccccCCcEEEEcCcCccChHHHHHHHhhcC-CCe
Q 011765 164 TPEDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLHR-KPV 242 (478)
Q Consensus 164 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~~~~~~-~~~ 242 (478)
..|+ +. .++. .+.++.+++ +|++ . ...++ .++
T Consensus 124 ----------~~~g-----~~----nr~~-------------------~~~a~~v~~-~f~~---~-----~~~~~~~k~ 156 (352)
T PRK12446 124 ----------MTPG-----LA----NKIA-------------------LRFASKIFV-TFEE---A-----AKHLPKEKV 156 (352)
T ss_pred ----------CCcc-----HH----HHHH-------------------HHhhCEEEE-Eccc---h-----hhhCCCCCe
Confidence 1111 00 0000 112232222 2221 1 12333 468
Q ss_pred eeec-cCCCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccCCCH-HHHHHHHHHHHhCCCCEEEEEecCCCCC
Q 011765 243 IPVG-QLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQ-EELTEIALGLELSKLPFFWVLKKRLGQA 320 (478)
Q Consensus 243 ~~vG-p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~-~~~~~~~~al~~~~~~~i~~~~~~~~~~ 320 (478)
.++| |+...... ...++..+.+...+++++|+|..||.+.... +.+..++..+. .+.+++|+++.+.
T Consensus 157 ~~tG~Pvr~~~~~-------~~~~~~~~~~~l~~~~~~iLv~GGS~Ga~~in~~~~~~l~~l~-~~~~vv~~~G~~~--- 225 (352)
T PRK12446 157 IYTGSPVREEVLK-------GNREKGLAFLGFSRKKPVITIMGGSLGAKKINETVREALPELL-LKYQIVHLCGKGN--- 225 (352)
T ss_pred EEECCcCCccccc-------ccchHHHHhcCCCCCCcEEEEECCccchHHHHHHHHHHHHhhc-cCcEEEEEeCCch---
Confidence 8999 44433211 1122233334444567899999999885333 33444444443 2467788876431
Q ss_pred CCCCCCCChhhhhhcCCCcEEEeccC-C-hhhhhcCCCceeeeeccChhhHHHHHHhCCcEeccccc-----cchhhHHH
Q 011765 321 DTEPIELPDGFEERTRGRGVVYTSWA-P-QLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCY-----ADQGLNAK 393 (478)
Q Consensus 321 ~~~~~~~p~~~~~~~~~~n~~~~~~v-p-q~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~-----~DQ~~na~ 393 (478)
+.. ...+ ..++.+..|+ + ..++++.+++ +|||||.+|+.|++++|+|+|++|+. .||..||+
T Consensus 226 ------~~~-~~~~--~~~~~~~~f~~~~m~~~~~~adl--vIsr~G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~ 294 (352)
T PRK12446 226 ------LDD-SLQN--KEGYRQFEYVHGELPDILAITDF--VISRAGSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAE 294 (352)
T ss_pred ------HHH-HHhh--cCCcEEecchhhhHHHHHHhCCE--EEECCChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHH
Confidence 111 0111 1245566787 4 4568998998 99999999999999999999999984 48999999
Q ss_pred HHhhcCeEEEeeccCCCCcccHHHHHHHHHHHhcccchH-HHHHHHHH
Q 011765 394 LLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQ-IYRDKAKE 440 (478)
Q Consensus 394 ~v~~~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~-~~~~~a~~ 440 (478)
.++++|+|..+...+ ++++.|.+++.++++ |+ .|++++++
T Consensus 295 ~l~~~g~~~~l~~~~----~~~~~l~~~l~~ll~---~~~~~~~~~~~ 335 (352)
T PRK12446 295 SFERQGYASVLYEED----VTVNSLIKHVEELSH---NNEKYKTALKK 335 (352)
T ss_pred HHHHCCCEEEcchhc----CCHHHHHHHHHHHHc---CHHHHHHHHHH
Confidence 999999999998877 899999999999998 54 45544433
|
|
| >PF13528 Glyco_trans_1_3: Glycosyl transferase family 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.7e-26 Score=221.92 Aligned_cols=306 Identities=18% Similarity=0.210 Sum_probs=194.4
Q ss_pred cEEEEecCC-CccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCCCCCCCC-ccccCCCC
Q 011765 7 LQIAMFPWL-AFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVDNLREN-AEATIDLP 84 (478)
Q Consensus 7 ~~il~~~~~-~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~-~~~~~~~~ 84 (478)
|||+|...+ |.||+.+++.||++| |||+|+|++.....+.+... +.+..++ ++... .....+..
T Consensus 1 MkIl~~v~~~G~GH~~R~~~la~~L--rg~~v~~~~~~~~~~~~~~~-------~~~~~~~-----~~~~~~~~~~~~~~ 66 (318)
T PF13528_consen 1 MKILFYVQGHGLGHASRCLALARAL--RGHEVTFITSGPAPEFLKPR-------FPVREIP-----GLGPIQENGRLDRW 66 (318)
T ss_pred CEEEEEeCCCCcCHHHHHHHHHHHH--ccCceEEEEcCCcHHHhccc-------cCEEEcc-----CceEeccCCccchH
Confidence 899997666 779999999999999 69999999998776555432 4444453 11111 11111111
Q ss_pred hhHHHHH--HHHHhhhhHHHHHHHhhcCCCEEEEcCCcccHHHHHHHhCCCeEEEecchHHHHHhhccccccccccCCCC
Q 011765 85 YDEVKYL--KQSFDCLEEPMAKLLQSLAPDWLLFDFAAYWLPARARELGIPSGFFSIFTAATLGYFGPSSVLINDSGDHL 162 (478)
Q Consensus 85 ~~~~~~~--~~~~~~~~~~l~~ll~~~~pD~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (478)
....... ..........+.+++++.+||+||+| +.+.+..+|+..|||++.+........ +
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~pDlVIsD-~~~~~~~aa~~~giP~i~i~~~~~~~~-----~----------- 129 (318)
T PF13528_consen 67 KTVRNNIRWLARLARRIRREIRWLREFRPDLVISD-FYPLAALAARRAGIPVIVISNQYWFLH-----P----------- 129 (318)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEc-ChHHHHHHHHhcCCCEEEEEehHHccc-----c-----------
Confidence 1111111 11223344566778888999999999 444577899999999999866443210 0
Q ss_pred CCCCcccCCCcccccccccccchhhhhhhhhhhcCCcccchhhhhhhc--cccCCcEEEEcCcCccChHHHHHHHhhcCC
Q 011765 163 KTPEDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQ--SLKGCDIVAVRSCMEFEPEWLKLLEQLHRK 240 (478)
Q Consensus 163 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~ns~~~le~~~~~~~~~~~~~ 240 (478)
..+.+.. . .+.++. ..... ....++..+.-++. .. .....
T Consensus 130 ---------~~~~~~~-------~---~~~~~~----------~~~~~~~~~~~~~~~l~~~~~-~~--------~~~~~ 171 (318)
T PF13528_consen 130 ---------NFWLPWD-------Q---DFGRLI----------ERYIDRYHFPPADRRLALSFY-PP--------LPPFF 171 (318)
T ss_pred ---------cCCcchh-------h---hHHHHH----------HHhhhhccCCcccceecCCcc-cc--------ccccc
Confidence 0111100 0 000000 01010 12233434443332 00 01112
Q ss_pred CeeeeccCCCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccCCCHHHHHHHHHHHHhCC-CCEEEEEecCCCC
Q 011765 241 PVIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELSK-LPFFWVLKKRLGQ 319 (478)
Q Consensus 241 ~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~-~~~i~~~~~~~~~ 319 (478)
++.++||+..+.... . ...+++.|+|++|..... .+.++++..+ ..|++. +...
T Consensus 172 ~~~~~~p~~~~~~~~--------------~--~~~~~~~iLv~~gg~~~~------~~~~~l~~~~~~~~~v~-g~~~-- 226 (318)
T PF13528_consen 172 RVPFVGPIIRPEIRE--------------L--PPEDEPKILVYFGGGGPG------DLIEALKALPDYQFIVF-GPNA-- 226 (318)
T ss_pred cccccCchhcccccc--------------c--CCCCCCEEEEEeCCCcHH------HHHHHHHhCCCCeEEEE-cCCc--
Confidence 466788887643321 0 012345899999987632 6667777666 455544 4321
Q ss_pred CCCCCCCCChhhhhhcCCCcEEEeccC--ChhhhhcCCCceeeeeccChhhHHHHHHhCCcEecccc--ccchhhHHHHH
Q 011765 320 ADTEPIELPDGFEERTRGRGVVYTSWA--PQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTC--YADQGLNAKLL 395 (478)
Q Consensus 320 ~~~~~~~~p~~~~~~~~~~n~~~~~~v--pq~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~--~~DQ~~na~~v 395 (478)
... ..+|+.+..|. +..++|+.|++ +|||||+||++|++++|+|+|++|. ..||..||+++
T Consensus 227 ----~~~---------~~~ni~~~~~~~~~~~~~m~~ad~--vIs~~G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l 291 (318)
T PF13528_consen 227 ----ADP---------RPGNIHVRPFSTPDFAELMAAADL--VISKGGYTTISEALALGKPALVIPRPGQDEQEYNARKL 291 (318)
T ss_pred ----ccc---------cCCCEEEeecChHHHHHHHHhCCE--EEECCCHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHH
Confidence 011 23488888876 44778988888 9999999999999999999999999 78999999999
Q ss_pred hhcCeEEEeeccCCCCcccHHHHHHHHHHH
Q 011765 396 EEKQIVELIPRDEGDGFFTRNSVAESLRLV 425 (478)
Q Consensus 396 ~~~g~G~~l~~~~~~~~~~~~~l~~~i~~l 425 (478)
+++|+|..++..+ ++++.|+++|+++
T Consensus 292 ~~~G~~~~~~~~~----~~~~~l~~~l~~~ 317 (318)
T PF13528_consen 292 EELGLGIVLSQED----LTPERLAEFLERL 317 (318)
T ss_pred HHCCCeEEccccc----CCHHHHHHHHhcC
Confidence 9999999998877 9999999999864
|
|
| >COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.5e-23 Score=201.08 Aligned_cols=342 Identities=20% Similarity=0.203 Sum_probs=213.9
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCC-eEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCCCCCCCCccccCCCCh
Q 011765 7 LQIAMFPWLAFGHMIPWLELAKLIAQKGH-KIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVDNLRENAEATIDLPY 85 (478)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~La~~L~~rGh-~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~~~~~~~ 85 (478)
|+|++...++-||+.|.++|+++|.++|+ +|.++.+....+...... ..+++..|+. ..+... ...
T Consensus 1 ~~ivl~~gGTGGHv~pAlAl~~~l~~~g~~~v~~~~~~~~~e~~l~~~----~~~~~~~I~~---~~~~~~-----~~~- 67 (357)
T COG0707 1 KKIVLTAGGTGGHVFPALALAEELAKRGWEQVIVLGTGDGLEAFLVKQ----YGIEFELIPS---GGLRRK-----GSL- 67 (357)
T ss_pred CeEEEEeCCCccchhHHHHHHHHHHhhCccEEEEecccccceeeeccc----cCceEEEEec---cccccc-----CcH-
Confidence 47788888888999999999999999999 588886665544322211 2378887763 111111 111
Q ss_pred hHHHHHHHHHhhhhHHHHHHHhhcCCCEEEEcC--CcccHHHHHHHhCCCeEEEecchHHHHHhhccccccccccCCCCC
Q 011765 86 DEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDF--AAYWLPARARELGIPSGFFSIFTAATLGYFGPSSVLINDSGDHLK 163 (478)
Q Consensus 86 ~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~--~~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (478)
..+......+.. ..+..+++++.+||+||.-. .+.++..+|..+|||++..-.
T Consensus 68 ~~~~~~~~~~~~-~~~a~~il~~~kPd~vig~Ggyvs~P~~~Aa~~~~iPv~ihEq------------------------ 122 (357)
T COG0707 68 KLLKAPFKLLKG-VLQARKILKKLKPDVVIGTGGYVSGPVGIAAKLLGIPVIIHEQ------------------------ 122 (357)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHcCCCEEEecCCccccHHHHHHHhCCCCEEEEec------------------------
Confidence 111111122222 22667788999999999853 344677899999999998622
Q ss_pred CCCcccCCCcccccccccccchhhhhhhhhhhcCCcccchhhhhhhccccCCcEEEEcCcCccChHHHHHHHhhc-CCCe
Q 011765 164 TPEDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLH-RKPV 242 (478)
Q Consensus 164 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~~~~~-~~~~ 242 (478)
...|+..+ .+. .+.++.+ ..+|+..+ ... +.++
T Consensus 123 ---------n~~~G~an---------k~~-------------------~~~a~~V-~~~f~~~~--------~~~~~~~~ 156 (357)
T COG0707 123 ---------NAVPGLAN---------KIL-------------------SKFAKKV-ASAFPKLE--------AGVKPENV 156 (357)
T ss_pred ---------CCCcchhH---------HHh-------------------HHhhcee-eecccccc--------ccCCCCce
Confidence 22222100 000 0111211 12222100 111 1257
Q ss_pred eeec-cCCCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccCCC-HHHHHHHHHHHHhCCCCEEEEEecCCCCC
Q 011765 243 IPVG-QLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPS-QEELTEIALGLELSKLPFFWVLKKRLGQA 320 (478)
Q Consensus 243 ~~vG-p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~-~~~~~~~~~al~~~~~~~i~~~~~~~~~~ 320 (478)
..+| |+..+... .+..-.+.... .++++|+|..||.+... .+.+......+.+ +..+++..+.+
T Consensus 157 ~~tG~Pvr~~~~~--------~~~~~~~~~~~-~~~~~ilV~GGS~Ga~~ln~~v~~~~~~l~~-~~~v~~~~G~~---- 222 (357)
T COG0707 157 VVTGIPVRPEFEE--------LPAAEVRKDGR-LDKKTILVTGGSQGAKALNDLVPEALAKLAN-RIQVIHQTGKN---- 222 (357)
T ss_pred EEecCcccHHhhc--------cchhhhhhhcc-CCCcEEEEECCcchhHHHHHHHHHHHHHhhh-CeEEEEEcCcc----
Confidence 7888 66644221 01111111112 25779999999988522 2333334444433 45666665532
Q ss_pred CCCCCCCChhhhhhcCCCc-EEEeccCChh-hhhcCCCceeeeeccChhhHHHHHHhCCcEeccccc----cchhhHHHH
Q 011765 321 DTEPIELPDGFEERTRGRG-VVYTSWAPQL-AILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCY----ADQGLNAKL 394 (478)
Q Consensus 321 ~~~~~~~p~~~~~~~~~~n-~~~~~~vpq~-~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~----~DQ~~na~~ 394 (478)
. -+.........+ +.+..|.+++ ++++.+++ +||++|.+|+.|++++|+|+|.+|+- .||..||+.
T Consensus 223 -----~-~~~~~~~~~~~~~~~v~~f~~dm~~~~~~ADL--vIsRaGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~ 294 (357)
T COG0707 223 -----D-LEELKSAYNELGVVRVLPFIDDMAALLAAADL--VISRAGALTIAELLALGVPAILVPYPPGADGHQEYNAKF 294 (357)
T ss_pred -----h-HHHHHHHHhhcCcEEEeeHHhhHHHHHHhccE--EEeCCcccHHHHHHHhCCCEEEeCCCCCccchHHHHHHH
Confidence 1 123333333334 7788888774 47877888 99999999999999999999999962 489999999
Q ss_pred HhhcCeEEEeeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhcccCChHHHHHHHHHH
Q 011765 395 LEEKQIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNY 461 (478)
Q Consensus 395 v~~~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~ 461 (478)
++++|.|..++..+ +|.+++.+.|.++++ +++-.++++.-++.+...+...+.++.++..
T Consensus 295 l~~~gaa~~i~~~~----lt~~~l~~~i~~l~~---~~~~l~~m~~~a~~~~~p~aa~~i~~~~~~~ 354 (357)
T COG0707 295 LEKAGAALVIRQSE----LTPEKLAELILRLLS---NPEKLKAMAENAKKLGKPDAAERIADLLLAL 354 (357)
T ss_pred HHhCCCEEEecccc----CCHHHHHHHHHHHhc---CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 99999999999998 999999999999999 6666666666666666666555555555443
|
|
| >TIGR00661 MJ1255 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.1e-23 Score=203.21 Aligned_cols=310 Identities=16% Similarity=0.141 Sum_probs=175.5
Q ss_pred EEEEe-cCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeE-EEEecCCCCCCCCCC-ccccCCCC
Q 011765 8 QIAMF-PWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQ-FVKISLPHVDNLREN-AEATIDLP 84 (478)
Q Consensus 8 ~il~~-~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~-~~~i~~~~~~~l~~~-~~~~~~~~ 84 (478)
||+|. +..+.||+.|.++||++|++ ||+|+|+++......+...+ +. +..+| ++... .....+..
T Consensus 1 ril~~~~g~G~GH~~r~~ala~~L~~-g~ev~~~~~~~~~~~~~~~~------~~~~~~~p-----~~~~~~~~~~~~~~ 68 (321)
T TIGR00661 1 KILYSVCGEGFGHTTRSVAIGEALKN-DYEVSYIASGRSKNYISKYG------FKVFETFP-----GIKLKGEDGKVNIV 68 (321)
T ss_pred CEEEEEeccCccHHHHHHHHHHHHhC-CCeEEEEEcCCHHHhhhhhc------CcceeccC-----CceEeecCCcCcHH
Confidence 57775 45567999999999999999 99999999888655555544 33 33322 11100 00001111
Q ss_pred hhHHHHHHHHHhhhhHHHHHHHhhcCCCEEEEcCCcccHHHHHHHhCCCeEEEecchHHHHHhhccccccccccCCCCCC
Q 011765 85 YDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAAYWLPARARELGIPSGFFSIFTAATLGYFGPSSVLINDSGDHLKT 164 (478)
Q Consensus 85 ~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (478)
... ...............+++++.+||+||+| +.+.+..+|+.+|||++.+..+.... .
T Consensus 69 ~~l-~~~~~~~~~~~~~~~~~l~~~~pDlVi~d-~~~~~~~aA~~~~iP~i~i~~q~~~~-----~-------------- 127 (321)
T TIGR00661 69 KTL-RNKEYSPKKAIRREINIIREYNPDLIISD-FEYSTVVAAKLLKIPVICISNQNYTR-----Y-------------- 127 (321)
T ss_pred HHH-HhhccccHHHHHHHHHHHHhcCCCEEEEC-CchHHHHHHHhcCCCEEEEecchhhc-----C--------------
Confidence 111 10001101223345678889999999999 67778899999999999886532210 0
Q ss_pred CCcccCCCcccccccccccchhhhhhhhhhhcCCcccchhhhhhhccccCCcEEEEcCcCccChHHHHHHHhhcCCCee-
Q 011765 165 PEDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLHRKPVI- 243 (478)
Q Consensus 165 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~~~~~~~~~~- 243 (478)
|.... ...+.. ..+ +......++...+..+..... ..|+...
T Consensus 128 -----------~~~~~-~~~~~~-~~~----------------~~~~~~~~~~~~~~~~~~~~~--------~~p~~~~~ 170 (321)
T TIGR00661 128 -----------PLKTD-LIVYPT-MAA----------------LRIFNERCERFIVPDYPFPYT--------ICPKIIKN 170 (321)
T ss_pred -----------Ccccc-hhHHHH-HHH----------------HHHhccccceEeeecCCCCCC--------CCcccccc
Confidence 00000 000000 000 001111223222222211110 0010000
Q ss_pred eeccCCCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccCCCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCC
Q 011765 244 PVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELSKLPFFWVLKKRLGQADTE 323 (478)
Q Consensus 244 ~vGp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~ 323 (478)
.-+|.. ..+..+|... +++.|+|.+|+.. ...+++++++.+. +.+++..... .
T Consensus 171 ~~~~~~--------------~~~~~~~~~~--~~~~iLv~~g~~~------~~~l~~~l~~~~~-~~~i~~~~~~----~ 223 (321)
T TIGR00661 171 MEGPLI--------------RYDVDDVDNY--GEDYILVYIGFEY------RYKILELLGKIAN-VKFVCYSYEV----A 223 (321)
T ss_pred CCCccc--------------chhhhccccC--CCCcEEEECCcCC------HHHHHHHHHhCCC-eEEEEeCCCC----C
Confidence 001111 0112222222 3457777777744 2345667766553 2233222111 1
Q ss_pred CCCCChhhhhhcCCCcEEEeccCC--hhhhhcCCCceeeeeccChhhHHHHHHhCCcEecccccc--chhhHHHHHhhcC
Q 011765 324 PIELPDGFEERTRGRGVVYTSWAP--QLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYA--DQGLNAKLLEEKQ 399 (478)
Q Consensus 324 ~~~~p~~~~~~~~~~n~~~~~~vp--q~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~--DQ~~na~~v~~~g 399 (478)
...++ +|+.+..|.| ..+.|+.+++ +|||||++|++||+++|+|+|++|... ||..||+.++++|
T Consensus 224 ~~~~~---------~~v~~~~~~~~~~~~~l~~ad~--vI~~~G~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g 292 (321)
T TIGR00661 224 KNSYN---------ENVEIRRITTDNFKELIKNAEL--VITHGGFSLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLG 292 (321)
T ss_pred ccccC---------CCEEEEECChHHHHHHHHhCCE--EEECCChHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCC
Confidence 12223 3888889997 3567777777 999999999999999999999999854 9999999999999
Q ss_pred eEEEeeccCCCCcccHHHHHHHHHHHhcccchHHHH
Q 011765 400 IVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYR 435 (478)
Q Consensus 400 ~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~ 435 (478)
+|+.++..+ + ++.+++.++++ |+.|+
T Consensus 293 ~~~~l~~~~----~---~~~~~~~~~~~---~~~~~ 318 (321)
T TIGR00661 293 CGIALEYKE----L---RLLEAILDIRN---MKRYK 318 (321)
T ss_pred CEEEcChhh----H---HHHHHHHhccc---ccccc
Confidence 999998765 4 56666767777 55553
|
This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases. |
| >PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.9e-21 Score=186.81 Aligned_cols=343 Identities=21% Similarity=0.173 Sum_probs=211.2
Q ss_pred ccEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCc--cccCCCCCCCCCCCeEEEEecCCCCCCCCCCccccCCC
Q 011765 6 KLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRN--IDRLPRLPQNLASMIQFVKISLPHVDNLRENAEATIDL 83 (478)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~--~~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~~~~~ 83 (478)
+|||+|+..+..||...++.|++.|.++||+|++++.+.. .+..+..| +.++.++.+ .+.. ..
T Consensus 1 ~~~i~i~~~g~gG~~~~~~~la~~L~~~g~ev~vv~~~~~~~~~~~~~~g------~~~~~~~~~---~~~~------~~ 65 (357)
T PRK00726 1 MKKILLAGGGTGGHVFPALALAEELKKRGWEVLYLGTARGMEARLVPKAG------IEFHFIPSG---GLRR------KG 65 (357)
T ss_pred CcEEEEEcCcchHhhhHHHHHHHHHHhCCCEEEEEECCCchhhhccccCC------CcEEEEecc---CcCC------CC
Confidence 4899999988889999999999999999999999988653 22222233 666666521 1110 00
Q ss_pred ChhHHHHHHHHHhhhhHHHHHHHhhcCCCEEEEcCC--cccHHHHHHHhCCCeEEEecchHHHHHhhccccccccccCCC
Q 011765 84 PYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFA--AYWLPARARELGIPSGFFSIFTAATLGYFGPSSVLINDSGDH 161 (478)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~--~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (478)
............ .....+.+++++.+||+|++... ...+..++...++|++.....
T Consensus 66 ~~~~l~~~~~~~-~~~~~~~~~ik~~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~--------------------- 123 (357)
T PRK00726 66 SLANLKAPFKLL-KGVLQARKILKRFKPDVVVGFGGYVSGPGGLAARLLGIPLVIHEQN--------------------- 123 (357)
T ss_pred hHHHHHHHHHHH-HHHHHHHHHHHhcCCCEEEECCCcchhHHHHHHHHcCCCEEEEcCC---------------------
Confidence 011111111111 12335677888899999999963 334556788889999854110
Q ss_pred CCCCCcccCCCcccccccccccchhhhhhhhhhhcCCcccchhhhhhhccccCCcEEEEcCcCccChHHHHHHHhhcCCC
Q 011765 162 LKTPEDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLHRKP 241 (478)
Q Consensus 162 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~~~~~~~~ 241 (478)
+.+. ...++. ...+|.++..+... +. ..-+.+
T Consensus 124 ------------~~~~---------~~~r~~-------------------~~~~d~ii~~~~~~-----~~---~~~~~~ 155 (357)
T PRK00726 124 ------------AVPG---------LANKLL-------------------ARFAKKVATAFPGA-----FP---EFFKPK 155 (357)
T ss_pred ------------CCcc---------HHHHHH-------------------HHHhchheECchhh-----hh---ccCCCC
Confidence 0000 000110 11223333222110 10 112346
Q ss_pred eeeeccCCCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccCCCHHHHHH-HHHHHHhCCC--CEEEEEecCCC
Q 011765 242 VIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTE-IALGLELSKL--PFFWVLKKRLG 318 (478)
Q Consensus 242 ~~~vGp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~-~~~al~~~~~--~~i~~~~~~~~ 318 (478)
+.++|......... .. . ...-+...++.++|++..|+.. ...... +.+++.+... .+++.++...
T Consensus 156 i~vi~n~v~~~~~~-----~~-~--~~~~~~~~~~~~~i~~~gg~~~---~~~~~~~l~~a~~~~~~~~~~~~~~G~g~- 223 (357)
T PRK00726 156 AVVTGNPVREEILA-----LA-A--PPARLAGREGKPTLLVVGGSQG---ARVLNEAVPEALALLPEALQVIHQTGKGD- 223 (357)
T ss_pred EEEECCCCChHhhc-----cc-c--hhhhccCCCCCeEEEEECCcHh---HHHHHHHHHHHHHHhhhCcEEEEEcCCCc-
Confidence 78888443221110 00 0 0001111223446666555532 222222 3355554433 3344444321
Q ss_pred CCCCCCCCCChhhhhhcC-CCcEEEeccCC-hhhhhcCCCceeeeeccChhhHHHHHHhCCcEecccc----ccchhhHH
Q 011765 319 QADTEPIELPDGFEERTR-GRGVVYTSWAP-QLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTC----YADQGLNA 392 (478)
Q Consensus 319 ~~~~~~~~~p~~~~~~~~-~~n~~~~~~vp-q~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~----~~DQ~~na 392 (478)
. +.+.+... .-++.+..|+. ..++++.+++ +|+|+|.++++||+++|+|+|++|. ..+|..|+
T Consensus 224 --------~-~~~~~~~~~~~~v~~~g~~~~~~~~~~~~d~--~i~~~g~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~ 292 (357)
T PRK00726 224 --------L-EEVRAAYAAGINAEVVPFIDDMAAAYAAADL--VICRAGASTVAELAAAGLPAILVPLPHAADDHQTANA 292 (357)
T ss_pred --------H-HHHHHHhhcCCcEEEeehHhhHHHHHHhCCE--EEECCCHHHHHHHHHhCCCEEEecCCCCCcCcHHHHH
Confidence 1 22222222 11377788884 4679988888 9999999999999999999999997 46899999
Q ss_pred HHHhhcCeEEEeeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhcccCChHHHHHHHHHHHH
Q 011765 393 KLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLK 463 (478)
Q Consensus 393 ~~v~~~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~~ 463 (478)
..+.+.|.|..++..+ ++++.|++++.++++ |+++++++.+-+....+..+..+.++.+++.++
T Consensus 293 ~~i~~~~~g~~~~~~~----~~~~~l~~~i~~ll~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (357)
T PRK00726 293 RALVDAGAALLIPQSD----LTPEKLAEKLLELLS---DPERLEAMAEAARALGKPDAAERLADLIEELAR 356 (357)
T ss_pred HHHHHCCCEEEEEccc----CCHHHHHHHHHHHHc---CHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHhh
Confidence 9999999999998876 789999999999999 899999999988888888877888887777654
|
|
| >cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.3e-19 Score=173.43 Aligned_cols=332 Identities=21% Similarity=0.204 Sum_probs=199.0
Q ss_pred EEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCccc--cCCCCCCCCCCCeEEEEecCCCCCCCCCCccccCCCCh
Q 011765 8 QIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNID--RLPRLPQNLASMIQFVKISLPHVDNLRENAEATIDLPY 85 (478)
Q Consensus 8 ~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~--~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~~~~~~~ 85 (478)
+|++...+..||....+.|++.|.++||+|++++...... ..... ++++..++... +.. ...
T Consensus 1 ~~~~~~~~~gG~~~~~~~la~~l~~~G~ev~v~~~~~~~~~~~~~~~------~~~~~~~~~~~---~~~------~~~- 64 (350)
T cd03785 1 RILIAGGGTGGHIFPALALAEELRERGAEVLFLGTKRGLEARLVPKA------GIPLHTIPVGG---LRR------KGS- 64 (350)
T ss_pred CEEEEecCchhhhhHHHHHHHHHHhCCCEEEEEECCCcchhhccccc------CCceEEEEecC---cCC------CCh-
Confidence 5888888888999999999999999999999998754321 11111 26666665311 100 000
Q ss_pred hHHHHHHHHH--hhhhHHHHHHHhhcCCCEEEEcCC--cccHHHHHHHhCCCeEEEecchHHHHHhhccccccccccCCC
Q 011765 86 DEVKYLKQSF--DCLEEPMAKLLQSLAPDWLLFDFA--AYWLPARARELGIPSGFFSIFTAATLGYFGPSSVLINDSGDH 161 (478)
Q Consensus 86 ~~~~~~~~~~--~~~~~~l~~ll~~~~pD~vI~D~~--~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (478)
+..+...+ ......+.+++++.+||+|++... ..++..+|...|+|++.... .
T Consensus 65 --~~~~~~~~~~~~~~~~~~~~i~~~~pDvI~~~~~~~~~~~~~~a~~~~~p~v~~~~-~-------------------- 121 (350)
T cd03785 65 --LKKLKAPFKLLKGVLQARKILKKFKPDVVVGFGGYVSGPVGLAAKLLGIPLVIHEQ-N-------------------- 121 (350)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCcchHHHHHHHHhCCCEEEEcC-C--------------------
Confidence 11111111 112235667788899999998742 33456788899999985311 0
Q ss_pred CCCCCcccCCCcccccccccccchhhhhhhhhhhcCCcccchhhhhhhccccCCcEEEEcCcCccChHHHHHHHhhcCCC
Q 011765 162 LKTPEDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLHRKP 241 (478)
Q Consensus 162 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~~~~~~~~ 241 (478)
..+. . ...+ ....++.++..+-...+ . .-+.+
T Consensus 122 ------------~~~~-----~----~~~~-------------------~~~~~~~vi~~s~~~~~-----~---~~~~~ 153 (350)
T cd03785 122 ------------AVPG-----L----ANRL-------------------LARFADRVALSFPETAK-----Y---FPKDK 153 (350)
T ss_pred ------------CCcc-----H----HHHH-------------------HHHhhCEEEEcchhhhh-----c---CCCCc
Confidence 0000 0 0000 01224555554421111 1 11345
Q ss_pred eeeeccCCCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccCCCH-HHHHHHHHHHHhCCCCEEEEEecCCCCC
Q 011765 242 VIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQ-EELTEIALGLELSKLPFFWVLKKRLGQA 320 (478)
Q Consensus 242 ~~~vGp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~-~~~~~~~~al~~~~~~~i~~~~~~~~~~ 320 (478)
+.++|........ .. ... ...+...+++++|++..|+...... +.+...+..+.+.+..+++.++..
T Consensus 154 ~~~i~n~v~~~~~------~~-~~~-~~~~~~~~~~~~i~~~~g~~~~~~~~~~l~~a~~~l~~~~~~~~~i~G~g---- 221 (350)
T cd03785 154 AVVTGNPVREEIL------AL-DRE-RARLGLRPGKPTLLVFGGSQGARAINEAVPEALAELLRKRLQVIHQTGKG---- 221 (350)
T ss_pred EEEECCCCchHHh------hh-hhh-HHhcCCCCCCeEEEEECCcHhHHHHHHHHHHHHHHhhccCeEEEEEcCCc----
Confidence 7777743322110 00 011 2223333344466665665542111 222333444443334445555432
Q ss_pred CCCCCCCChhhhhhcC--CCcEEEeccC-ChhhhhcCCCceeeeeccChhhHHHHHHhCCcEecccc----ccchhhHHH
Q 011765 321 DTEPIELPDGFEERTR--GRGVVYTSWA-PQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTC----YADQGLNAK 393 (478)
Q Consensus 321 ~~~~~~~p~~~~~~~~--~~n~~~~~~v-pq~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~----~~DQ~~na~ 393 (478)
.. +.+.+... .+|+.+..|+ +..++|+.+++ +|+++|.+|+.||+++|+|+|++|. ..+|..|+.
T Consensus 222 --~~----~~l~~~~~~~~~~v~~~g~~~~~~~~l~~ad~--~v~~sg~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~ 293 (350)
T cd03785 222 --DL----EEVKKAYEELGVNYEVFPFIDDMAAAYAAADL--VISRAGASTVAELAALGLPAILIPLPYAADDHQTANAR 293 (350)
T ss_pred --cH----HHHHHHHhccCCCeEEeehhhhHHHHHHhcCE--EEECCCHhHHHHHHHhCCCEEEeecCCCCCCcHHHhHH
Confidence 11 22222221 3588888888 44678888888 9999999999999999999999985 468999999
Q ss_pred HHhhcCeEEEeeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhcccCChHH
Q 011765 394 LLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDR 453 (478)
Q Consensus 394 ~v~~~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~ 453 (478)
.+.+.|+|..++..+ .+.+++.++|+++++ +++.++++.+-+....+..+.++
T Consensus 294 ~l~~~g~g~~v~~~~----~~~~~l~~~i~~ll~---~~~~~~~~~~~~~~~~~~~~~~~ 346 (350)
T cd03785 294 ALVKAGAAVLIPQEE----LTPERLAAALLELLS---DPERLKAMAEAARSLARPDAAER 346 (350)
T ss_pred HHHhCCCEEEEecCC----CCHHHHHHHHHHHhc---CHHHHHHHHHHHHhcCCCCHHHH
Confidence 999999999998765 689999999999999 78888777777766656553333
|
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.82 E-value=7.5e-18 Score=165.12 Aligned_cols=331 Identities=19% Similarity=0.208 Sum_probs=187.8
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCcc--ccCCCCCCCCCCCeEEEEecCCCCCCCCCCccccCCCC
Q 011765 7 LQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNI--DRLPRLPQNLASMIQFVKISLPHVDNLRENAEATIDLP 84 (478)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~--~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~~~~~~ 84 (478)
|||+|+..+..||+.....||++|.++||+|++++.+... +.....| +.++.++. ..... ...
T Consensus 1 ~~i~~~~g~~~g~~~~~~~La~~L~~~g~eV~vv~~~~~~~~~~~~~~g------~~~~~i~~---~~~~~------~~~ 65 (348)
T TIGR01133 1 KKVVLAAGGTGGHIFPALAVAEELIKRGVEVLWLGTKRGLEKRLVPKAG------IEFYFIPV---GGLRR------KGS 65 (348)
T ss_pred CeEEEEeCccHHHHhHHHHHHHHHHhCCCEEEEEeCCCcchhcccccCC------CceEEEec---cCcCC------CCh
Confidence 6999999999999998889999999999999999864321 1112223 66666652 11000 001
Q ss_pred hhHHHHHHHHHhhhhHHHHHHHhhcCCCEEEEcCCc--ccHHHHHHHhCCCeEEEecchHHHHHhhccccccccccCCCC
Q 011765 85 YDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAA--YWLPARARELGIPSGFFSIFTAATLGYFGPSSVLINDSGDHL 162 (478)
Q Consensus 85 ~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~--~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (478)
...+........ ....+.+++++.+||+|++.... ..+..++..+++|++.... .
T Consensus 66 ~~~l~~~~~~~~-~~~~l~~~i~~~~pDvVi~~~~~~~~~~~~~~~~~~~p~v~~~~-~--------------------- 122 (348)
T TIGR01133 66 FRLIKTPLKLLK-AVFQARRILKKFKPDAVIGFGGYVSGPAGLAAKLLGIPLFHHEQ-N--------------------- 122 (348)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHhcCCCEEEEcCCcccHHHHHHHHHcCCCEEEECC-C---------------------
Confidence 111111111111 22356778899999999997532 2345678888999974311 0
Q ss_pred CCCCcccCCCcccccccccccchhhhhhhhhhhcCCcccchhhhhhhccccCCcEEEEcCcCccChHHHHHHHhhcCCCe
Q 011765 163 KTPEDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLHRKPV 242 (478)
Q Consensus 163 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~~~~~~~~~ 242 (478)
..+. . ..++. .+.+|.+++.+... .+.+ ..
T Consensus 123 -----------~~~~-----~----~~~~~-------------------~~~~d~ii~~~~~~---------~~~~--~~ 152 (348)
T TIGR01133 123 -----------AVPG-----L----TNKLL-------------------SRFAKKVLISFPGA---------KDHF--EA 152 (348)
T ss_pred -----------CCcc-----H----HHHHH-------------------HHHhCeeEECchhH---------hhcC--Cc
Confidence 0000 0 00000 12345444433111 0111 12
Q ss_pred eeec-cCCCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccCCCHHHHHH-HHHHHH---hCCCCEEEEEecCC
Q 011765 243 IPVG-QLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTE-IALGLE---LSKLPFFWVLKKRL 317 (478)
Q Consensus 243 ~~vG-p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~-~~~al~---~~~~~~i~~~~~~~ 317 (478)
.++| |+....... .. . ..++...+++++|.+..|+.. .+.+.. +.++++ ..+..++++.+..
T Consensus 153 ~~i~n~v~~~~~~~-----~~-~---~~~~~~~~~~~~i~~~gg~~~---~~~~~~~l~~a~~~l~~~~~~~~~~~g~~- 219 (348)
T TIGR01133 153 VLVGNPVRQEIRSL-----PV-P---RERFGLREGKPTILVLGGSQG---AKILNELVPKALAKLAEKGIQIVHQTGKN- 219 (348)
T ss_pred eEEcCCcCHHHhcc-----cc-h---hhhcCCCCCCeEEEEECCchh---HHHHHHHHHHHHHHHhhcCcEEEEECCcc-
Confidence 4555 332111100 00 0 112222233434444334433 222222 334443 3344555433321
Q ss_pred CCCCCCCCCCChhhhhhcCCCcE-EEeccC--ChhhhhcCCCceeeeeccChhhHHHHHHhCCcEeccccc---cchhhH
Q 011765 318 GQADTEPIELPDGFEERTRGRGV-VYTSWA--PQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCY---ADQGLN 391 (478)
Q Consensus 318 ~~~~~~~~~~p~~~~~~~~~~n~-~~~~~v--pq~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~---~DQ~~n 391 (478)
.. +.+.+.....++ .++.|. +..++++.+++ +|+++|.+++.||+++|+|+|++|.. .+|..|
T Consensus 220 --------~~-~~l~~~~~~~~l~~~v~~~~~~~~~~l~~ad~--~v~~~g~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~ 288 (348)
T TIGR01133 220 --------DL-EKVKNVYQELGIEAIVTFIDENMAAAYAAADL--VISRAGASTVAELAAAGVPAILIPYPYAADDQYYN 288 (348)
T ss_pred --------hH-HHHHHHHhhCCceEEecCcccCHHHHHHhCCE--EEECCChhHHHHHHHcCCCEEEeeCCCCccchhhH
Confidence 11 222222221121 122233 45678888888 99999988999999999999999863 478889
Q ss_pred HHHHhhcCeEEEeeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhcccCChHHHHH
Q 011765 392 AKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVD 456 (478)
Q Consensus 392 a~~v~~~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 456 (478)
+..+.+.|.|..++..+ .+.+.|.++++++++ |+++++++.+-+....+.....+.++
T Consensus 289 ~~~i~~~~~G~~~~~~~----~~~~~l~~~i~~ll~---~~~~~~~~~~~~~~~~~~~~~~~i~~ 346 (348)
T TIGR01133 289 AKFLEDLGAGLVIRQKE----LLPEKLLEALLKLLL---DPANLEAMAEAARKLAKPDAAKRIAE 346 (348)
T ss_pred HHHHHHCCCEEEEeccc----CCHHHHHHHHHHHHc---CHHHHHHHHHHHHhcCCccHHHHHHh
Confidence 99999999999988765 689999999999999 88888877777766666664444443
|
RL J Bacteriol 1993 Mar;175(6):1841-3 |
| >COG4671 Predicted glycosyl transferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.2e-17 Score=152.38 Aligned_cols=340 Identities=19% Similarity=0.256 Sum_probs=202.9
Q ss_pred CCccEEEEecCC--CccCHHHHHHHHHHHHhC--CCeEEEEeCCCccccCCC-CCCCCCCCeEEEEecCCCCCCCCCCcc
Q 011765 4 NSKLQIAMFPWL--AFGHMIPWLELAKLIAQK--GHKIFFISTPRNIDRLPR-LPQNLASMIQFVKISLPHVDNLRENAE 78 (478)
Q Consensus 4 ~~~~~il~~~~~--~~gH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~~~~-~g~~~~~~i~~~~i~~~~~~~l~~~~~ 78 (478)
++.+||+|++.- +.||+.+++.||++|++. |.+|++++......-..- .| ++|+.+|.-. ....+..
T Consensus 7 ~~~~Ri~~Yshd~~GlGHlrR~~~Ia~aLv~d~~~~~Il~IsG~~~~~~F~~~~g------Vd~V~LPsl~--k~~~G~~ 78 (400)
T COG4671 7 SKRPRILFYSHDLLGLGHLRRALRIAHALVEDYLGFDILIISGGPPAGGFPGPAG------VDFVKLPSLI--KGDNGEY 78 (400)
T ss_pred hccceEEEEehhhccchHHHHHHHHHHHHhhcccCceEEEEeCCCccCCCCCccc------CceEecCceE--ecCCCce
Confidence 345699999887 559999999999999998 999999998876654443 44 9999998211 1111221
Q ss_pred ccCCCChhHHHHHHHHHhhhhHHHHHHHhhcCCCEEEEcCCcccHHHHHHHhCCCeEEEecchHHHHHhhcccccccccc
Q 011765 79 ATIDLPYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAAYWLPARARELGIPSGFFSIFTAATLGYFGPSSVLINDS 158 (478)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~~~~ 158 (478)
...+...+ ..+....-...+...++..+||++|+|.+-+ |+. -+.+ |. +.+.. ..
T Consensus 79 ~~~d~~~~----l~e~~~~Rs~lil~t~~~fkPDi~IVd~~P~-Glr-~EL~--pt----------L~yl~-~~------ 133 (400)
T COG4671 79 GLVDLDGD----LEETKKLRSQLILSTAETFKPDIFIVDKFPF-GLR-FELL--PT----------LEYLK-TT------ 133 (400)
T ss_pred eeeecCCC----HHHHHHHHHHHHHHHHHhcCCCEEEEecccc-chh-hhhh--HH----------HHHHh-hc------
Confidence 11121111 2222223334556677888999999996544 311 1111 00 00000 00
Q ss_pred CCCCCCCCcccCCCcccccccccccchhhhhhhhhhhcCCcccchhhhhhhccccCCcEEEEcCcCccChHHHH-HHHhh
Q 011765 159 GDHLKTPEDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLK-LLEQL 237 (478)
Q Consensus 159 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~-~~~~~ 237 (478)
. +...+- ++++..........|+........-+--|.+.+...+.+..+... .....
T Consensus 134 -------------~------t~~vL~---lr~i~D~p~~~~~~w~~~~~~~~I~r~yD~V~v~GdP~f~d~~~~~~~~~~ 191 (400)
T COG4671 134 -------------G------TRLVLG---LRSIRDIPQELEADWRRAETVRLINRFYDLVLVYGDPDFYDPLTEFPFAPA 191 (400)
T ss_pred -------------C------Ccceee---hHhhhhchhhhccchhhhHHHHHHHHhheEEEEecCccccChhhcCCccHh
Confidence 0 000000 011111111111111111111111122355555554444322110 11233
Q ss_pred cCCCeeeeccCCCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccCCCHHHHHHHHHHHHh-CCCC--EEEEEe
Q 011765 238 HRKPVIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLEL-SKLP--FFWVLK 314 (478)
Q Consensus 238 ~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~-~~~~--~i~~~~ 314 (478)
...++.|+|.+....+.. ..++ . ..+++..|+||.|... ...+.+...++|... .+.+ ++.+++
T Consensus 192 i~~k~~ytG~vq~~~~~~-----~~p~------~-~~pE~~~Ilvs~GGG~-dG~eLi~~~l~A~~~l~~l~~~~~ivtG 258 (400)
T COG4671 192 IRAKMRYTGFVQRSLPHL-----PLPP------H-EAPEGFDILVSVGGGA-DGAELIETALAAAQLLAGLNHKWLIVTG 258 (400)
T ss_pred hhhheeEeEEeeccCcCC-----CCCC------c-CCCccceEEEecCCCh-hhHHHHHHHHHHhhhCCCCCcceEEEeC
Confidence 345799999883221110 1111 1 1144558999988765 467888888877654 3333 555554
Q ss_pred cCCCCCCCCCCCCChhhhhhc-----CCCcEEEeccCCh-hhhhcCCCceeeeeccChhhHHHHHHhCCcEeccccc---
Q 011765 315 KRLGQADTEPIELPDGFEERT-----RGRGVVYTSWAPQ-LAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCY--- 385 (478)
Q Consensus 315 ~~~~~~~~~~~~~p~~~~~~~-----~~~n~~~~~~vpq-~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~--- 385 (478)
. ..|.....+. +.+++.+..|-.+ ..++..|+. +|+-||+||++|-|++|+|.+++|..
T Consensus 259 P----------~MP~~~r~~l~~~A~~~p~i~I~~f~~~~~~ll~gA~~--vVSm~GYNTvCeILs~~k~aLivPr~~p~ 326 (400)
T COG4671 259 P----------FMPEAQRQKLLASAPKRPHISIFEFRNDFESLLAGARL--VVSMGGYNTVCEILSFGKPALIVPRAAPR 326 (400)
T ss_pred C----------CCCHHHHHHHHHhcccCCCeEEEEhhhhHHHHHHhhhe--eeecccchhhhHHHhCCCceEEeccCCCc
Confidence 3 3444333332 2368888888766 568877777 99999999999999999999999984
Q ss_pred cchhhHHHHHhhcCeEEEeeccCCCCcccHHHHHHHHHHHhc
Q 011765 386 ADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLV 427 (478)
Q Consensus 386 ~DQ~~na~~v~~~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~ 427 (478)
.+|-.-|+|++++|+.-++...+ +++..++++|...++
T Consensus 327 eEQliRA~Rl~~LGL~dvL~pe~----lt~~~La~al~~~l~ 364 (400)
T COG4671 327 EEQLIRAQRLEELGLVDVLLPEN----LTPQNLADALKAALA 364 (400)
T ss_pred HHHHHHHHHHHhcCcceeeCccc----CChHHHHHHHHhccc
Confidence 49999999999999999998888 999999999999998
|
|
| >PRK13609 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.9e-17 Score=164.15 Aligned_cols=352 Identities=16% Similarity=0.134 Sum_probs=199.7
Q ss_pred CccEEEEecCCCc-cCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeE--E---EEecCCCCCCCCCCcc
Q 011765 5 SKLQIAMFPWLAF-GHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQ--F---VKISLPHVDNLRENAE 78 (478)
Q Consensus 5 ~~~~il~~~~~~~-gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~--~---~~i~~~~~~~l~~~~~ 78 (478)
+.||||+++...- ||..+..+|+++|.++||+|+++++..... ..... ..+. | ...+ ..+..-..
T Consensus 3 ~~~rili~t~~~G~GH~~~a~al~~~l~~~g~~~~~~~d~~~~~-~~~~~----~~~~~~y~~~~~~~----~~~~~~~~ 73 (380)
T PRK13609 3 KNPKVLILTAHYGNGHVQVAKTLEQTFRQKGIKDVIVCDLFGES-HPVIT----EITKYLYLKSYTIG----KELYRLFY 73 (380)
T ss_pred CCCeEEEEEcCCCchHHHHHHHHHHHHHhcCCCcEEEEEhHHhc-chHHH----HHHHHHHHHHHHHh----HHHHHHHH
Confidence 4679999877754 999999999999999999977765543210 00000 0000 0 0000 00000000
Q ss_pred ccCCCChhHHHHHHHHHhhhhHHHHHHHhhcCCCEEEEcCCcccHH--HHHHHhCCCeEEEecchHHHHHhhcccccccc
Q 011765 79 ATIDLPYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAAYWLP--ARARELGIPSGFFSIFTAATLGYFGPSSVLIN 156 (478)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~~~~~--~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~~ 156 (478)
......... ..+..........+.+++++.+||+||++.-.+... ..+..++||++.+.+.. . .
T Consensus 74 ~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~~~pD~Vi~~~~~~~~~~~~~~~~~~ip~~~~~td~----~--~------- 139 (380)
T PRK13609 74 YGVEKIYDK-KIFSWYANFGRKRLKLLLQAEKPDIVINTFPIIAVPELKKQTGISIPTYNVLTDF----C--L------- 139 (380)
T ss_pred hccCcccch-HHHHHHHHHHHHHHHHHHHHhCcCEEEEcChHHHHHHHHHhcCCCCCeEEEeCCC----C--C-------
Confidence 000000000 011111122246788999999999999984332222 22334568877543200 0 0
Q ss_pred ccCCCCCCCCcccCCCcccccccccccchhhhhhhhhhhcCCcccchhhhhhhccccCCcEEEEcCcCccChHHHHHHHh
Q 011765 157 DSGDHLKTPEDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQ 236 (478)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~~~ 236 (478)
+.. | ..+.+|.+++.+ ....+.+..
T Consensus 140 --------------~~~-----------------~-------------------~~~~ad~i~~~s-----~~~~~~l~~ 164 (380)
T PRK13609 140 --------------HKI-----------------W-------------------VHREVDRYFVAT-----DHVKKVLVD 164 (380)
T ss_pred --------------Ccc-----------------c-------------------ccCCCCEEEECC-----HHHHHHHHH
Confidence 000 0 022456666655 222222222
Q ss_pred h-cC-CCeeeec-cCCCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccCCCHHHHHHHHHHHHhC-CCCEEEE
Q 011765 237 L-HR-KPVIPVG-QLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELS-KLPFFWV 312 (478)
Q Consensus 237 ~-~~-~~~~~vG-p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~i~~ 312 (478)
. .+ .++..+| |+...... ......+..-+.-.+++++|++..|+.... ..+..+++++.+. +.+++++
T Consensus 165 ~gi~~~ki~v~G~p~~~~f~~------~~~~~~~~~~~~l~~~~~~il~~~G~~~~~--k~~~~li~~l~~~~~~~~viv 236 (380)
T PRK13609 165 IGVPPEQVVETGIPIRSSFEL------KINPDIIYNKYQLCPNKKILLIMAGAHGVL--GNVKELCQSLMSVPDLQVVVV 236 (380)
T ss_pred cCCChhHEEEECcccChHHcC------cCCHHHHHHHcCCCCCCcEEEEEcCCCCCC--cCHHHHHHHHhhCCCcEEEEE
Confidence 1 12 2466777 55322111 111222333233334456788877876532 2345566666543 4556655
Q ss_pred EecCCCCCCCCCCCCChhhhhhc--CCCcEEEeccCCh-hhhhcCCCceeeeeccChhhHHHHHHhCCcEecc-ccccch
Q 011765 313 LKKRLGQADTEPIELPDGFEERT--RGRGVVYTSWAPQ-LAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVL-TCYADQ 388 (478)
Q Consensus 313 ~~~~~~~~~~~~~~~p~~~~~~~--~~~n~~~~~~vpq-~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~-P~~~DQ 388 (478)
.+.+. .+-+.+.+.. ..+++.+..|+++ .++++.+++ +|+..|..|+.||+++|+|+|+. |..+.|
T Consensus 237 ~G~~~--------~~~~~l~~~~~~~~~~v~~~g~~~~~~~l~~~aD~--~v~~~gg~t~~EA~a~g~PvI~~~~~~g~~ 306 (380)
T PRK13609 237 CGKNE--------ALKQSLEDLQETNPDALKVFGYVENIDELFRVTSC--MITKPGGITLSEAAALGVPVILYKPVPGQE 306 (380)
T ss_pred eCCCH--------HHHHHHHHHHhcCCCcEEEEechhhHHHHHHhccE--EEeCCCchHHHHHHHhCCCEEECCCCCCcc
Confidence 54220 0111121111 1247888899987 468888888 99999988999999999999985 666777
Q ss_pred hhHHHHHhhcCeEEEeeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhcccCChHHHHHHHHHHHH
Q 011765 389 GLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLK 463 (478)
Q Consensus 389 ~~na~~v~~~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~~ 463 (478)
..|+..+.+.|+|+.. -+.+++.++|.++++ |++.++++.+-...+.+..+.++.++.+++.+.
T Consensus 307 ~~n~~~~~~~G~~~~~--------~~~~~l~~~i~~ll~---~~~~~~~m~~~~~~~~~~~s~~~i~~~i~~~~~ 370 (380)
T PRK13609 307 KENAMYFERKGAAVVI--------RDDEEVFAKTEALLQ---DDMKLLQMKEAMKSLYLPEPADHIVDDILAENH 370 (380)
T ss_pred hHHHHHHHhCCcEEEE--------CCHHHHHHHHHHHHC---CHHHHHHHHHHHHHhCCCchHHHHHHHHHHhhh
Confidence 8999999999998753 277899999999999 787777777666666666666677777766553
|
|
| >TIGR00215 lpxB lipid-A-disaccharide synthase | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.4e-17 Score=164.25 Aligned_cols=351 Identities=16% Similarity=0.164 Sum_probs=201.4
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCCCCCCCCccccCCCChh
Q 011765 7 LQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVDNLRENAEATIDLPYD 86 (478)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~~~~~~~~ 86 (478)
.||+|+..+..||++|. +|+++|+++|++|+|++.... .+++.|-. ..+.+..++. .++ .+
T Consensus 6 ~ki~i~aGgtsGhi~pa-al~~~l~~~~~~~~~~g~gg~--~m~~~g~~--~~~~~~~l~v---~G~-----------~~ 66 (385)
T TIGR00215 6 PTIALVAGEASGDILGA-GLRQQLKEHYPNARFIGVAGP--RMAAEGCE--VLYSMEELSV---MGL-----------RE 66 (385)
T ss_pred CeEEEEeCCccHHHHHH-HHHHHHHhcCCCcEEEEEccH--HHHhCcCc--cccChHHhhh---ccH-----------HH
Confidence 47888888888999999 999999999999999986632 23343300 0122222220 010 01
Q ss_pred HHHHHHHHHhhhhHHHHHHHhhcCCCEEEE-cCCcccHHH--HHHHhCCCeEEEecchHHHHHhhccccccccccCCCCC
Q 011765 87 EVKYLKQSFDCLEEPMAKLLQSLAPDWLLF-DFAAYWLPA--RARELGIPSGFFSIFTAATLGYFGPSSVLINDSGDHLK 163 (478)
Q Consensus 87 ~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~-D~~~~~~~~--~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (478)
.+..+..... ......+++++.+||+||. |........ +|+.+|||++...+ +...+
T Consensus 67 ~l~~~~~~~~-~~~~~~~~l~~~kPd~vi~~g~~~~~~~~a~aa~~~gip~v~~i~--P~~wa----------------- 126 (385)
T TIGR00215 67 VLGRLGRLLK-IRKEVVQLAKQAKPDLLVGIDAPDFNLTKELKKKDPGIKIIYYIS--PQVWA----------------- 126 (385)
T ss_pred HHHHHHHHHH-HHHHHHHHHHhcCCCEEEEeCCCCccHHHHHHHhhCCCCEEEEeC--CcHhh-----------------
Confidence 2222222222 2337778889999999996 532323233 88999999996532 00000
Q ss_pred CCCcccCCCcccccccccccchhhhhhhhhhhcCCcccchhhhhhhccccCCcEEEEcCcCccChHHHHHHHhhcCCCee
Q 011765 164 TPEDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLHRKPVI 243 (478)
Q Consensus 164 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~~~~~~~~~~ 243 (478)
|-. .+ .....+.+|.++... ..+.+.+ . ....+..
T Consensus 127 ----------w~~------~~-----------------------~r~l~~~~d~v~~~~--~~e~~~~---~-~~g~~~~ 161 (385)
T TIGR00215 127 ----------WRK------WR-----------------------AKKIEKATDFLLAIL--PFEKAFY---Q-KKNVPCR 161 (385)
T ss_pred ----------cCc------ch-----------------------HHHHHHHHhHhhccC--CCcHHHH---H-hcCCCEE
Confidence 000 00 000011233222222 1122211 1 1223577
Q ss_pred eec-cCCCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccCCCHHHHHHHHHHHHhC-----CCCEEEEEecCC
Q 011765 244 PVG-QLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELS-----KLPFFWVLKKRL 317 (478)
Q Consensus 244 ~vG-p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~ 317 (478)
+|| |+....... .....+..+-+.-.+++++|.+-.||....-......+++++..+ +.++++......
T Consensus 162 ~vGnPv~~~~~~~-----~~~~~~~r~~lgl~~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~~vi~~~~~~ 236 (385)
T TIGR00215 162 FVGHPLLDAIPLY-----KPDRKSAREKLGIDHNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLRRVLPVVNFK 236 (385)
T ss_pred EECCchhhhcccc-----CCCHHHHHHHcCCCCCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeEEEEEeCCch
Confidence 888 554322110 011223333334444567888877876642123344455544332 234544433211
Q ss_pred CCCCCCCCCCChhhhhhcC-CCcEEEeccCChhhhhcCCCceeeeeccChhhHHHHHHhCCcEecc----cccc------
Q 011765 318 GQADTEPIELPDGFEERTR-GRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVL----TCYA------ 386 (478)
Q Consensus 318 ~~~~~~~~~~p~~~~~~~~-~~n~~~~~~vpq~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~----P~~~------ 386 (478)
. ...+ +.+.+... ...+....+ +..++++.+++ +|+-.|..|+ |++++|+|+|++ |+..
T Consensus 237 ~-----~~~~-~~~~~~~~~~~~v~~~~~-~~~~~l~aADl--~V~~SGt~tl-Ea~a~G~P~Vv~yk~~pl~~~~~~~~ 306 (385)
T TIGR00215 237 R-----RLQF-EQIKAEYGPDLQLHLIDG-DARKAMFAADA--ALLASGTAAL-EAALIKTPMVVGYRMKPLTFLIARRL 306 (385)
T ss_pred h-----HHHH-HHHHHHhCCCCcEEEECc-hHHHHHHhCCE--EeecCCHHHH-HHHHcCCCEEEEEcCCHHHHHHHHHH
Confidence 0 0000 11111111 112332222 33568888888 9999999988 999999999999 8642
Q ss_pred ---chhhHHHHHhhcCeEEEeeccCCCCcccHHHHHHHHHHHhccc-----chHHHHHHHHHHHHHhcccCChHHHHHHH
Q 011765 387 ---DQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLVEE-----KGQIYRDKAKEMKGLFGDKGRHDRYVDNF 458 (478)
Q Consensus 387 ---DQ~~na~~v~~~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~-----~~~~~~~~a~~~~~~~~~~~~~~~~~~~i 458 (478)
.|..|+..+...++...+...+ +|++.|.+++.++|++. ..+.+++..+++.+.+.+.+.+.++++.|
T Consensus 307 ~~~~~~~~~nil~~~~~~pel~q~~----~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~i 382 (385)
T TIGR00215 307 VKTDYISLPNILANRLLVPELLQEE----CTPHPLAIALLLLLENGLKAYKEMHRERQFFEELRQRIYCNADSERAAQAV 382 (385)
T ss_pred HcCCeeeccHHhcCCccchhhcCCC----CCHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHH
Confidence 3888999999999999998777 89999999999999832 22467777788888887777778888877
Q ss_pred HH
Q 011765 459 LN 460 (478)
Q Consensus 459 ~~ 460 (478)
++
T Consensus 383 ~~ 384 (385)
T TIGR00215 383 LE 384 (385)
T ss_pred hh
Confidence 65
|
Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA |
| >PRK13608 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=9.3e-16 Score=152.10 Aligned_cols=168 Identities=13% Similarity=0.145 Sum_probs=118.7
Q ss_pred CCCceEEEEeCcccCCCHHHHHHHHHHH-Hh-CCCCEEEEEecCCCCCCCCCCCCChhhhhhc-CCCcEEEeccCCh-hh
Q 011765 275 EKGSVVYVAFGSEAKPSQEELTEIALGL-EL-SKLPFFWVLKKRLGQADTEPIELPDGFEERT-RGRGVVYTSWAPQ-LA 350 (478)
Q Consensus 275 ~~~~~v~vs~Gs~~~~~~~~~~~~~~al-~~-~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~-~~~n~~~~~~vpq-~~ 350 (478)
+++++|+++.|+... ...+..+++++ +. .+.+++++.+.+ ..+-+.+.+.. ..+++.+..|+++ .+
T Consensus 200 ~~~~~ilv~~G~lg~--~k~~~~li~~~~~~~~~~~~vvv~G~~--------~~l~~~l~~~~~~~~~v~~~G~~~~~~~ 269 (391)
T PRK13608 200 PDKQTILMSAGAFGV--SKGFDTMITDILAKSANAQVVMICGKS--------KELKRSLTAKFKSNENVLILGYTKHMNE 269 (391)
T ss_pred CCCCEEEEECCCccc--chhHHHHHHHHHhcCCCceEEEEcCCC--------HHHHHHHHHHhccCCCeEEEeccchHHH
Confidence 456688888888762 23344445553 22 234555554422 01111222222 2347888889876 45
Q ss_pred hhcCCCceeeeeccChhhHHHHHHhCCcEecc-ccccchhhHHHHHhhcCeEEEeeccCCCCcccHHHHHHHHHHHhccc
Q 011765 351 ILAHDSVGGFLTHAGWSSVVEALQFGMPLIVL-TCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLVEE 429 (478)
Q Consensus 351 vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~-P~~~DQ~~na~~v~~~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~ 429 (478)
+++.+++ +|+..|..|+.||+++|+|+|++ |..+.|..|+..+.+.|+|+... +.+++.++|.++++
T Consensus 270 ~~~~aDl--~I~k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~G~g~~~~--------~~~~l~~~i~~ll~-- 337 (391)
T PRK13608 270 WMASSQL--MITKPGGITISEGLARCIPMIFLNPAPGQELENALYFEEKGFGKIAD--------TPEEAIKIVASLTN-- 337 (391)
T ss_pred HHHhhhE--EEeCCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhCCcEEEeC--------CHHHHHHHHHHHhc--
Confidence 8888888 99998888999999999999998 66667789999999999998742 77889999999999
Q ss_pred chHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHhc
Q 011765 430 KGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLKNH 465 (478)
Q Consensus 430 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~ 465 (478)
|++.++++.+-.....+..+.++.++.+++.+...
T Consensus 338 -~~~~~~~m~~~~~~~~~~~s~~~i~~~l~~l~~~~ 372 (391)
T PRK13608 338 -GNEQLTNMISTMEQDKIKYATQTICRDLLDLIGHS 372 (391)
T ss_pred -CHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhhhh
Confidence 77777777766666666677777888888877543
|
|
| >TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG | Back alignment and domain information |
|---|
Probab=99.72 E-value=6.2e-16 Score=145.50 Aligned_cols=254 Identities=15% Similarity=0.163 Sum_probs=150.9
Q ss_pred CCccCHHHHHHHHHHHHhCCCeEEEEeCCCcc---ccCCCCCCCCCCCeEEEEecCCCCCCCCCCccccCCCChhHHHHH
Q 011765 15 LAFGHMIPWLELAKLIAQKGHKIFFISTPRNI---DRLPRLPQNLASMIQFVKISLPHVDNLRENAEATIDLPYDEVKYL 91 (478)
Q Consensus 15 ~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~---~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~ 91 (478)
-+.||+.+++.||++|.++||+|+|++..... +.+.+.| +.+..++ +. .+
T Consensus 12 iG~GHv~Rcl~LA~~l~~~g~~v~f~~~~~~~~~~~~i~~~g------~~v~~~~----~~--~~--------------- 64 (279)
T TIGR03590 12 IGLGHVMRCLTLARALHAQGAEVAFACKPLPGDLIDLLLSAG------FPVYELP----DE--SS--------------- 64 (279)
T ss_pred ccccHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHcC------CeEEEec----CC--Cc---------------
Confidence 37799999999999999999999999987544 3344555 7777775 21 00
Q ss_pred HHHHhhhhHHHHHHHhhcCCCEEEEcCCcccHHH--HHHHhCCCeEEEecchHHHHHhhccccccccccCCCCCCCCccc
Q 011765 92 KQSFDCLEEPMAKLLQSLAPDWLLFDFAAYWLPA--RARELGIPSGFFSIFTAATLGYFGPSSVLINDSGDHLKTPEDYT 169 (478)
Q Consensus 92 ~~~~~~~~~~l~~ll~~~~pD~vI~D~~~~~~~~--~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (478)
...-...+.+++++.+||+||.|.+...... ..+..+.+++.+--..
T Consensus 65 ---~~~d~~~~~~~l~~~~~d~vV~D~y~~~~~~~~~~k~~~~~l~~iDD~~---------------------------- 113 (279)
T TIGR03590 65 ---RYDDALELINLLEEEKFDILIVDHYGLDADWEKLIKEFGRKILVIDDLA---------------------------- 113 (279)
T ss_pred ---hhhhHHHHHHHHHhcCCCEEEEcCCCCCHHHHHHHHHhCCeEEEEecCC----------------------------
Confidence 0112224667778889999999987654432 2333455555541100
Q ss_pred CCCcccccccccccchhhhhhhhhhhcCCcccchhhhhhhccccCCcEEEEcCcCccChHHHHHHHhhcC-CCeeeecc-
Q 011765 170 RVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLHR-KPVIPVGQ- 247 (478)
Q Consensus 170 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~~~~~~-~~~~~vGp- 247 (478)
.....+|.++..+.. .+. ..+. ...| ......||
T Consensus 114 ----------------------------------------~~~~~~D~vin~~~~-~~~--~~y~-~~~~~~~~~l~G~~ 149 (279)
T TIGR03590 114 ----------------------------------------DRPHDCDLLLDQNLG-ADA--SDYQ-GLVPANCRLLLGPS 149 (279)
T ss_pred ----------------------------------------CCCcCCCEEEeCCCC-cCH--hHhc-ccCcCCCeEEecch
Confidence 000133433332221 111 1110 1011 12456665
Q ss_pred --CCCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccCCCHHHHHHHHHHHHhC--CCCEEEEEecCCCCCCCC
Q 011765 248 --LPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELS--KLPFFWVLKKRLGQADTE 323 (478)
Q Consensus 248 --~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~ 323 (478)
+..+. ...........++.+.|+|++|...... ....+++++.+. +.++.++++..
T Consensus 150 Y~~lr~e-----------F~~~~~~~~~~~~~~~iLi~~GG~d~~~--~~~~~l~~l~~~~~~~~i~vv~G~~------- 209 (279)
T TIGR03590 150 YALLREE-----------FYQLATANKRRKPLRRVLVSFGGADPDN--LTLKLLSALAESQINISITLVTGSS------- 209 (279)
T ss_pred HHhhhHH-----------HHHhhHhhhcccccCeEEEEeCCcCCcC--HHHHHHHHHhccccCceEEEEECCC-------
Confidence 22110 0000000001112357899999665322 445566777654 34566666543
Q ss_pred CCCCChhhhhhc-CCCcEEEeccCChh-hhhcCCCceeeeeccChhhHHHHHHhCCcEeccccccchhhHHHH
Q 011765 324 PIELPDGFEERT-RGRGVVYTSWAPQL-AILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQGLNAKL 394 (478)
Q Consensus 324 ~~~~p~~~~~~~-~~~n~~~~~~vpq~-~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~ 394 (478)
....+.+.+.. ..+|+.+..|+++. +++..+++ +||+|| +|++|+++.|+|+|++|...+|..||+.
T Consensus 210 -~~~~~~l~~~~~~~~~i~~~~~~~~m~~lm~~aDl--~Is~~G-~T~~E~~a~g~P~i~i~~~~nQ~~~a~~ 278 (279)
T TIGR03590 210 -NPNLDELKKFAKEYPNIILFIDVENMAELMNEADL--AIGAAG-STSWERCCLGLPSLAICLAENQQSNSQQ 278 (279)
T ss_pred -CcCHHHHHHHHHhCCCEEEEeCHHHHHHHHHHCCE--EEECCc-hHHHHHHHcCCCEEEEEecccHHHHhhh
Confidence 11222333222 23588888999885 78998998 999999 9999999999999999999999999985
|
This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases. |
| >PLN02605 monogalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.70 E-value=6.5e-15 Score=145.84 Aligned_cols=111 Identities=14% Similarity=0.094 Sum_probs=90.4
Q ss_pred CcEEEeccCCh-hhhhcCCCceeeeeccChhhHHHHHHhCCcEeccccccchh-hHHHHHhhcCeEEEeeccCCCCcccH
Q 011765 338 RGVVYTSWAPQ-LAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQG-LNAKLLEEKQIVELIPRDEGDGFFTR 415 (478)
Q Consensus 338 ~n~~~~~~vpq-~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~-~na~~v~~~g~G~~l~~~~~~~~~~~ 415 (478)
.++.+..|+++ .+++..+++ +|+.+|-+|+.||+++|+|+|+.+....|. .|+..+.+.|.|... . ++
T Consensus 265 ~~v~~~G~~~~~~~l~~aaDv--~V~~~g~~ti~EAma~g~PvI~~~~~pgqe~gn~~~i~~~g~g~~~---~-----~~ 334 (382)
T PLN02605 265 IPVKVRGFVTNMEEWMGACDC--IITKAGPGTIAEALIRGLPIILNGYIPGQEEGNVPYVVDNGFGAFS---E-----SP 334 (382)
T ss_pred CCeEEEeccccHHHHHHhCCE--EEECCCcchHHHHHHcCCCEEEecCCCccchhhHHHHHhCCceeec---C-----CH
Confidence 46788889886 558888888 999999999999999999999998776775 799999999999864 3 88
Q ss_pred HHHHHHHHHHhcccch-HHHHHHHHHHHHHhcccCChHHHHHHHHHH
Q 011765 416 NSVAESLRLVLVEEKG-QIYRDKAKEMKGLFGDKGRHDRYVDNFLNY 461 (478)
Q Consensus 416 ~~l~~~i~~ll~~~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~ 461 (478)
+.|.++|.++++ + ++.++++...+.......++.+.++.+.+.
T Consensus 335 ~~la~~i~~ll~---~~~~~~~~m~~~~~~~~~~~a~~~i~~~l~~~ 378 (382)
T PLN02605 335 KEIARIVAEWFG---DKSDELEAMSENALKLARPEAVFDIVHDLHEL 378 (382)
T ss_pred HHHHHHHHHHHc---CCHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Confidence 999999999998 5 777777777777777777556666655554
|
|
| >PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=99.68 E-value=5.6e-15 Score=146.58 Aligned_cols=346 Identities=18% Similarity=0.194 Sum_probs=176.9
Q ss_pred ccEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCCCCCCCCccccCCCCh
Q 011765 6 KLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVDNLRENAEATIDLPY 85 (478)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~~~~~~~ 85 (478)
+|||+|+..+.-||+.|.. ++++|+++++++.+++.... .++..+- ...+.++.++ .. .. .
T Consensus 1 ~~ki~i~~Ggt~G~i~~a~-l~~~L~~~~~~~~~~~~~~~--~~~~~~~--~~~~~~~~l~--------~~-----g~-~ 61 (380)
T PRK00025 1 PLRIAIVAGEVSGDLLGAG-LIRALKARAPNLEFVGVGGP--RMQAAGC--ESLFDMEELA--------VM-----GL-V 61 (380)
T ss_pred CceEEEEecCcCHHHHHHH-HHHHHHhcCCCcEEEEEccH--HHHhCCC--ccccCHHHhh--------hc-----cH-H
Confidence 5799999999999999999 99999998877777764331 1222220 0012222221 10 00 1
Q ss_pred hHHHHHHHHHhhhhHHHHHHHhhcCCCEEEEcCC-cccH--HHHHHHhCCCeEEEecchHHHHHhhccccccccccCCCC
Q 011765 86 DEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFA-AYWL--PARARELGIPSGFFSIFTAATLGYFGPSSVLINDSGDHL 162 (478)
Q Consensus 86 ~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~-~~~~--~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (478)
+.+..+..... ....+.+++++.+||+|+.-.+ ..+. ...|..+|||++...... .
T Consensus 62 ~~~~~~~~~~~-~~~~~~~~l~~~kPdivi~~~~~~~~~~~a~~a~~~~ip~i~~~~~~-~------------------- 120 (380)
T PRK00025 62 EVLPRLPRLLK-IRRRLKRRLLAEPPDVFIGIDAPDFNLRLEKKLRKAGIPTIHYVSPS-V------------------- 120 (380)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHCCCCEEEEeCCc-h-------------------
Confidence 11112111122 2346778889999999976422 2233 334678899988652200 0
Q ss_pred CCCCcccCCCcccccccccccchhhhhhhhhhhcCCcccchhhhhhhccccCCcEEEEcCcCccChHHHHHHHhhcCCCe
Q 011765 163 KTPEDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLHRKPV 242 (478)
Q Consensus 163 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~~~~~~~~~ 242 (478)
-.+.+. ..+. ..+.+|.+++.+-. +.. .... ..-++
T Consensus 121 ---------~~~~~~--------------------------~~~~---~~~~~d~i~~~~~~--~~~---~~~~-~g~~~ 156 (380)
T PRK00025 121 ---------WAWRQG--------------------------RAFK---IAKATDHVLALFPF--EAA---FYDK-LGVPV 156 (380)
T ss_pred ---------hhcCch--------------------------HHHH---HHHHHhhheeCCcc--CHH---HHHh-cCCCe
Confidence 000000 0000 12233444443321 111 1111 22237
Q ss_pred eeec-cCCCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccCCCHHHHHHHHHHHHhC-----CCCEEEEEecC
Q 011765 243 IPVG-QLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELS-----KLPFFWVLKKR 316 (478)
Q Consensus 243 ~~vG-p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~ 316 (478)
.++| |+...... .....+....+.-.+++++|++..||...........++++++.+ +.+++++.+..
T Consensus 157 ~~~G~p~~~~~~~------~~~~~~~~~~l~~~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~~ii~~~~~ 230 (380)
T PRK00025 157 TFVGHPLADAIPL------LPDRAAARARLGLDPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLRFVLPLVNP 230 (380)
T ss_pred EEECcCHHHhccc------ccChHHHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCCh
Confidence 7788 44322110 111223333343333455666666764431112234445544321 34566654311
Q ss_pred CCCCCCCCCCCChhhhhhcCC---CcEEEeccCChhhhhcCCCceeeeeccChhhHHHHHHhCCcEecccccc-------
Q 011765 317 LGQADTEPIELPDGFEERTRG---RGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYA------- 386 (478)
Q Consensus 317 ~~~~~~~~~~~p~~~~~~~~~---~n~~~~~~vpq~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~------- 386 (478)
. .-+.+.+.... -++.+.. -.-.++++.+++ +|+.+|.+++ ||+++|+|+|++|-..
T Consensus 231 ~---------~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~aDl--~v~~sG~~~l-Ea~a~G~PvI~~~~~~~~~~~~~ 297 (380)
T PRK00025 231 K---------RREQIEEALAEYAGLEVTLLD-GQKREAMAAADA--ALAASGTVTL-ELALLKVPMVVGYKVSPLTFWIA 297 (380)
T ss_pred h---------hHHHHHHHHhhcCCCCeEEEc-ccHHHHHHhCCE--EEECccHHHH-HHHHhCCCEEEEEccCHHHHHHH
Confidence 1 00112221111 1333322 123567888888 9999999888 9999999999985321
Q ss_pred -chhhH-----HHHHhhcCeEEEeeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHH----HHHHhcccCChHHHHH
Q 011765 387 -DQGLN-----AKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKE----MKGLFGDKGRHDRYVD 456 (478)
Q Consensus 387 -DQ~~n-----a~~v~~~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~----~~~~~~~~~~~~~~~~ 456 (478)
.|..| +..+.+.+++..+.... .+++.|.+++.++++ |++.++++.+ +.+.+ ..+.+.+.++
T Consensus 298 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~l~~~i~~ll~---~~~~~~~~~~~~~~~~~~~-~~~a~~~~~~ 369 (380)
T PRK00025 298 KRLVKVPYVSLPNLLAGRELVPELLQEE----ATPEKLARALLPLLA---DGARRQALLEGFTELHQQL-RCGADERAAQ 369 (380)
T ss_pred HHHHcCCeeehHHHhcCCCcchhhcCCC----CCHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHh-CCCHHHHHHH
Confidence 22222 23333334444444444 689999999999999 7766654444 44555 5565566666
Q ss_pred HHHHHH
Q 011765 457 NFLNYL 462 (478)
Q Consensus 457 ~i~~~~ 462 (478)
.+.+.+
T Consensus 370 ~i~~~~ 375 (380)
T PRK00025 370 AVLELL 375 (380)
T ss_pred HHHHHh
Confidence 665544
|
|
| >TIGR03492 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.4e-12 Score=128.94 Aligned_cols=351 Identities=15% Similarity=0.075 Sum_probs=190.2
Q ss_pred HHHHHHHHHHHh--CCCeEE---EEeCCCccccCCCCCCCCCCCeEEEEecCCCCCCCCCCccccCCCChhHHHHHHH-H
Q 011765 21 IPWLELAKLIAQ--KGHKIF---FISTPRNIDRLPRLPQNLASMIQFVKISLPHVDNLRENAEATIDLPYDEVKYLKQ-S 94 (478)
Q Consensus 21 ~p~l~La~~L~~--rGh~Vt---~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~ 94 (478)
.-.++||++|++ .|++|. |+++..-.+. .. +.... |+ ..++.+.-.. ......+..+.. .
T Consensus 11 ~~a~ai~~~l~~~~~~~~v~~~p~vG~~~~~e~---~~------ip~~g-~~---~~~~sgg~~~-~~~~~~~~~~~~gl 76 (396)
T TIGR03492 11 LIAARIAKALLQLSPDLNLEALPLVGEGRAYQN---LG------IPIIG-PT---KELPSGGFSY-QSLRGLLRDLRAGL 76 (396)
T ss_pred HHHHHHHHHHHhhCCCCCeEEeCcccCCHHHhh---CC------CceeC-CC---CCCCCCCccC-CCHHHHHHHHHhhH
Confidence 346788999998 699999 9998876541 11 22211 21 2333332111 111122222222 2
Q ss_pred HhhhhHHHHHHHhhc--CCCEEEEcCCcccHHHHHHHhCCCeEEEecchHHHHHhhccccccccccCCCCCCCCcccCCC
Q 011765 95 FDCLEEPMAKLLQSL--APDWLLFDFAAYWLPARARELGIPSGFFSIFTAATLGYFGPSSVLINDSGDHLKTPEDYTRVP 172 (478)
Q Consensus 95 ~~~~~~~l~~ll~~~--~pD~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (478)
..... .-..+++++ +||+||+-.=.. +..+|..+|+|++.+.+.-...... +.+
T Consensus 77 ~~~~~-~~~~~~~~~~~~p~~v~~~Gg~v-~~~aA~~~~~p~~~~~~~esn~~~~----------------------~~~ 132 (396)
T TIGR03492 77 VGLTL-GQWRALRKWAKKGDLIVAVGDIV-PLLFAWLSGKPYAFVGTAKSDYYWE----------------------SGP 132 (396)
T ss_pred HHHHH-HHHHHHHHHhhcCCEEEEECcHH-HHHHHHHcCCCceEEEeeccceeec----------------------CCC
Confidence 22222 334456677 999998653222 7888999999999865411100000 000
Q ss_pred cccccccccccchhhhhhhhhhhcCCcccchhhhhhhccccCCcEEEEcCcCccChHHHHHHHhhcCCCeeeec-cCCCC
Q 011765 173 NWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLHRKPVIPVG-QLPTT 251 (478)
Q Consensus 173 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~~~~~~~~~~~vG-p~~~~ 251 (478)
.+ +.. . .++.+. +..+.+..+..-..+.++.+++.. +...+.+.. .+.++.+|| |+...
T Consensus 133 ~~-~~~-~------~~~~~~------G~~~~p~e~n~l~~~~a~~v~~~~-----~~t~~~l~~-~g~k~~~vGnPv~d~ 192 (396)
T TIGR03492 133 RR-SPS-D------EYHRLE------GSLYLPWERWLMRSRRCLAVFVRD-----RLTARDLRR-QGVRASYLGNPMMDG 192 (396)
T ss_pred CC-ccc-h------hhhccC------CCccCHHHHHHhhchhhCEEeCCC-----HHHHHHHHH-CCCeEEEeCcCHHhc
Confidence 00 000 0 000000 000000001111234456555544 222223322 234799999 87754
Q ss_pred CCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccCCCHHHHHHHHHHHHhC----CCCEEEEEecCCCCCCCCCCCC
Q 011765 252 TGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELS----KLPFFWVLKKRLGQADTEPIEL 327 (478)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~----~~~~i~~~~~~~~~~~~~~~~~ 327 (478)
.... ... .-.+++++|.+-.||-...-...+..++++++.+ +..|++.+.+.... ..+
T Consensus 193 l~~~--------~~~-----~l~~~~~~lllLpGSR~ae~~~~lp~~l~al~~L~~~~~~~~v~~~~~~~~~-----~~~ 254 (396)
T TIGR03492 193 LEPP--------ERK-----PLLTGRFRIALLPGSRPPEAYRNLKLLLRALEALPDSQPFVFLAAIVPSLSL-----EKL 254 (396)
T ss_pred Cccc--------ccc-----ccCCCCCEEEEECCCCHHHHHccHHHHHHHHHHHhhCCCeEEEEEeCCCCCH-----HHH
Confidence 3211 000 1122346888888887543334444566665443 56677776433110 000
Q ss_pred Chhhhh-h-------------cCCCcEEEeccCCh-hhhhcCCCceeeeeccChhhHHHHHHhCCcEeccccccchhhHH
Q 011765 328 PDGFEE-R-------------TRGRGVVYTSWAPQ-LAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQGLNA 392 (478)
Q Consensus 328 p~~~~~-~-------------~~~~n~~~~~~vpq-~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na 392 (478)
-..+.+ . ...+++.+..+..+ .++++.+++ +||-.|..| .|+...|+|+|++|....|. ||
T Consensus 255 ~~~l~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~ADl--vI~rSGt~T-~E~a~lg~P~Ilip~~~~q~-na 330 (396)
T TIGR03492 255 QAILEDLGWQLEGSSEDQTSLFQKGTLEVLLGRGAFAEILHWADL--GIAMAGTAT-EQAVGLGKPVIQLPGKGPQF-TY 330 (396)
T ss_pred HHHHHhcCceecCCccccchhhccCceEEEechHhHHHHHHhCCE--EEECcCHHH-HHHHHhCCCEEEEeCCCCHH-HH
Confidence 000000 0 01123445445433 668888888 999999777 99999999999999877786 98
Q ss_pred HHHhhc----CeEEEeeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHH-HHHHHhcccCChHHHHHHHHH
Q 011765 393 KLLEEK----QIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAK-EMKGLFGDKGRHDRYVDNFLN 460 (478)
Q Consensus 393 ~~v~~~----g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~-~~~~~~~~~~~~~~~~~~i~~ 460 (478)
...++. |.++.+... +.+.|.+++.++++ |++.++++. ..++.+.+.+.+.+.++.+.+
T Consensus 331 ~~~~~~~~l~g~~~~l~~~------~~~~l~~~l~~ll~---d~~~~~~~~~~~~~~lg~~~a~~~ia~~i~~ 394 (396)
T TIGR03492 331 GFAEAQSRLLGGSVFLASK------NPEQAAQVVRQLLA---DPELLERCRRNGQERMGPPGASARIAESILK 394 (396)
T ss_pred HHHHhhHhhcCCEEecCCC------CHHHHHHHHHHHHc---CHHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 877764 767776543 56999999999999 777776666 566667677766677666655
|
This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown. |
| >PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.55 E-value=2.7e-16 Score=136.86 Aligned_cols=140 Identities=20% Similarity=0.232 Sum_probs=97.1
Q ss_pred eEEEEeCcccCCCH-HHHHHHHHHHHh--CCCCEEEEEecCCCCCCCCCCCCChhhhhhcC--CCcEEEeccCC-hhhhh
Q 011765 279 VVYVAFGSEAKPSQ-EELTEIALGLEL--SKLPFFWVLKKRLGQADTEPIELPDGFEERTR--GRGVVYTSWAP-QLAIL 352 (478)
Q Consensus 279 ~v~vs~Gs~~~~~~-~~~~~~~~al~~--~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~--~~n~~~~~~vp-q~~vL 352 (478)
+|+|+.||.....- +.+..+...+.. ...+++++++.... ........ ..++.+.+|++ ..+++
T Consensus 1 tilv~gGs~g~~~l~~~v~~~~~~~~~~~~~~~viv~~G~~~~----------~~~~~~~~~~~~~v~~~~~~~~m~~~m 70 (167)
T PF04101_consen 1 TILVTGGSQGARDLNRLVLKILELLAEKHKNIQVIVQTGKNNY----------EELKIKVENFNPNVKVFGFVDNMAELM 70 (167)
T ss_dssp -EEEEETTTSHHHHHCCCCCHHHHHHHHHHHCCCCCCCTTCEC----------HHHCCCHCCTTCCCEEECSSSSHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHhhcCCCcEEEEEECCCcH----------HHHHHHHhccCCcEEEEechhhHHHHH
Confidence 48999998763111 122223333332 24677777764311 11111111 14789999999 67799
Q ss_pred cCCCceeeeeccChhhHHHHHHhCCcEecccccc----chhhHHHHHhhcCeEEEeeccCCCCcccHHHHHHHHHHHhcc
Q 011765 353 AHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYA----DQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLVE 428 (478)
Q Consensus 353 ~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~----DQ~~na~~v~~~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~ 428 (478)
..+++ +|||||.||++|++++|+|+|++|... +|..||..+++.|+|..+.... .+.+.|.++|.+++.
T Consensus 71 ~~aDl--vIs~aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~~~~~~----~~~~~L~~~i~~l~~- 143 (167)
T PF04101_consen 71 AAADL--VISHAGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIMLDESE----LNPEELAEAIEELLS- 143 (167)
T ss_dssp HHHSE--EEECS-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCCSECCC-----SCCCHHHHHHCHCC-
T ss_pred HHcCE--EEeCCCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCccccCccc----CCHHHHHHHHHHHHc-
Confidence 99998 999999999999999999999999988 9999999999999999999887 789999999999999
Q ss_pred cchHHHHHH
Q 011765 429 EKGQIYRDK 437 (478)
Q Consensus 429 ~~~~~~~~~ 437 (478)
++..+..
T Consensus 144 --~~~~~~~ 150 (167)
T PF04101_consen 144 --DPEKLKE 150 (167)
T ss_dssp --CHH-SHH
T ss_pred --CcHHHHH
Confidence 5554333
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B. |
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.8e-11 Score=120.13 Aligned_cols=338 Identities=16% Similarity=0.084 Sum_probs=180.2
Q ss_pred ccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCCCCCCCCccccCCCChhHHHHHHHHHh
Q 011765 17 FGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVDNLRENAEATIDLPYDEVKYLKQSFD 96 (478)
Q Consensus 17 ~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (478)
.|+.+.+..|+++|.++||+|++++........... ....+..++. ... ... ... .
T Consensus 14 ~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~-----~~~~~~~~~~---~~~-~~~----~~~-----------~ 69 (364)
T cd03814 14 NGVVRTLQRLVEHLRARGHEVLVIAPGPFRESEGPA-----RVVPVPSVPL---PGY-PEI----RLA-----------L 69 (364)
T ss_pred cceehHHHHHHHHHHHCCCEEEEEeCCchhhccCCC-----Cceeeccccc---Ccc-cce----Eec-----------c
Confidence 699999999999999999999999987643221110 1111111111 000 000 000 0
Q ss_pred hhhHHHHHHHhhcCCCEEEEcCCcc---cHHHHHHHhCCCeEEEecchHHHHHhhccccccccccCCCCCCCCcccCCCc
Q 011765 97 CLEEPMAKLLQSLAPDWLLFDFAAY---WLPARARELGIPSGFFSIFTAATLGYFGPSSVLINDSGDHLKTPEDYTRVPN 173 (478)
Q Consensus 97 ~~~~~l~~ll~~~~pD~vI~D~~~~---~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (478)
.....+...+++.+||+|++..... .+..+++.+++|++................
T Consensus 70 ~~~~~~~~~~~~~~pdii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~---------------------- 127 (364)
T cd03814 70 PPRRRVRRLLDAFAPDVVHIATPGPLGLAALRAARRLGIPVVTSYHTDFPEYLRYYGL---------------------- 127 (364)
T ss_pred cchhhHHHHHHhcCCCEEEEeccchhhHHHHHHHHHcCCCEEEEEecChHHHhhhccc----------------------
Confidence 0122445556788999998764332 345778889999987654322111100000
Q ss_pred ccccccccccchhhhhhhhhhhcCCcccchhhhhhhccccCCcEEEEcCcCccChHHHHHHHhhcCCCeeeeccCCCCCC
Q 011765 174 WVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLHRKPVIPVGQLPTTTG 253 (478)
Q Consensus 174 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~~~~~~~~~~~vGp~~~~~~ 253 (478)
.. .. .+ . ..........+|.+++.+... .+.......+++..+.+-.....
T Consensus 128 --~~-----~~-----~~----------~--~~~~~~~~~~~d~i~~~s~~~-----~~~~~~~~~~~~~~~~~g~~~~~ 178 (364)
T cd03814 128 --GP-----LS-----WL----------A--WAYLRWFHNRADRVLVPSPSL-----ADELRARGFRRVRLWPRGVDTEL 178 (364)
T ss_pred --ch-----Hh-----Hh----------h--HHHHHHHHHhCCEEEeCCHHH-----HHHHhccCCCceeecCCCccccc
Confidence 00 00 00 0 000111234567777766332 22222222233444432221110
Q ss_pred CCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccC-CCHHHHHHHHHHHHhC-CCCEEEEEecCCCCCCCCCCCCChhh
Q 011765 254 DGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAK-PSQEELTEIALGLELS-KLPFFWVLKKRLGQADTEPIELPDGF 331 (478)
Q Consensus 254 ~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~-~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~~p~~~ 331 (478)
-. . ..........+ . .+++.+++..|+... ...+.+.+++..+... +..++++-.+. . . +.+
T Consensus 179 ~~-~--~~~~~~~~~~~-~--~~~~~~i~~~G~~~~~k~~~~~i~~~~~l~~~~~~~l~i~G~~~-~-----~----~~~ 242 (364)
T cd03814 179 FH-P--RRRDEALRARL-G--PPDRPVLLYVGRLAPEKNLEALLDADLPLRRRPPVRLVIVGDGP-A-----R----ARL 242 (364)
T ss_pred cC-c--ccccHHHHHHh-C--CCCCeEEEEEeccccccCHHHHHHHHHHhhhcCCceEEEEeCCc-h-----H----HHH
Confidence 00 0 01111111122 1 223466777887653 2334455555554332 33444433221 1 0 111
Q ss_pred hhhcCCCcEEEeccCChhh---hhcCCCceeeeeccC----hhhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEe
Q 011765 332 EERTRGRGVVYTSWAPQLA---ILAHDSVGGFLTHAG----WSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELI 404 (478)
Q Consensus 332 ~~~~~~~n~~~~~~vpq~~---vL~~~~~~~~ItHgG----~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l 404 (478)
. ....|+.+..|+++.+ ++..+++ +|+.+. .+++.||+++|+|+|+.+.. .+...+++.+.|...
T Consensus 243 ~--~~~~~v~~~g~~~~~~~~~~~~~~d~--~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~----~~~~~i~~~~~g~~~ 314 (364)
T cd03814 243 E--ARYPNVHFLGFLDGEELAAAYASADV--FVFPSRTETFGLVVLEAMASGLPVVAPDAG----GPADIVTDGENGLLV 314 (364)
T ss_pred h--ccCCcEEEEeccCHHHHHHHHHhCCE--EEECcccccCCcHHHHHHHcCCCEEEcCCC----CchhhhcCCcceEEc
Confidence 1 1335888889998755 6777887 776654 37899999999999997654 355666777889888
Q ss_pred eccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhcccCChHHHHHHHHHHH
Q 011765 405 PRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYL 462 (478)
Q Consensus 405 ~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~ 462 (478)
+.. +.+++.+++.++++ |++.++++.+-+....+.-..+..++.+++.+
T Consensus 315 ~~~------~~~~l~~~i~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (364)
T cd03814 315 EPG------DAEAFAAALAALLA---DPELRRRMAARARAEAERRSWEAFLDNLLEAY 363 (364)
T ss_pred CCC------CHHHHHHHHHHHHc---CHHHHHHHHHHHHHHHhhcCHHHHHHHHHHhh
Confidence 654 67889999999999 77777766666666554454556666666543
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Probab=99.53 E-value=6.4e-11 Score=120.57 Aligned_cols=351 Identities=13% Similarity=0.083 Sum_probs=180.5
Q ss_pred CCccEEEEecCCC-----ccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCCCCCCCCcc
Q 011765 4 NSKLQIAMFPWLA-----FGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVDNLRENAE 78 (478)
Q Consensus 4 ~~~~~il~~~~~~-----~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~ 78 (478)
..||||+++..+. .|=-+.+..|++.|.++||+|++++....... ...+ +...... .+.....
T Consensus 56 ~~~mrI~~~~~~~~~~~~gG~~~~~~~l~~~L~~~G~eV~vlt~~~~~~~-~~~g------~~v~~~~-----~~~~~~~ 123 (465)
T PLN02871 56 SRPRRIALFVEPSPFSYVSGYKNRFQNFIRYLREMGDEVLVVTTDEGVPQ-EFHG------AKVIGSW-----SFPCPFY 123 (465)
T ss_pred CCCceEEEEECCcCCcccccHHHHHHHHHHHHHHCCCeEEEEecCCCCCc-cccC------ceeeccC-----CcCCccC
Confidence 4589999885432 24457889999999999999999997653211 1111 3332221 0000000
Q ss_pred ccCCCChhHHHHHHHHHhhhhHHHHHHHhhcCCCEEEEcCCc---ccHHHHHHHhCCCeEEEecchHHHHHhhccccccc
Q 011765 79 ATIDLPYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAA---YWLPARARELGIPSGFFSIFTAATLGYFGPSSVLI 155 (478)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~---~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~ 155 (478)
..... . -.....+.+++++.+||+|.+.... +.+..+++.+|+|+|........
T Consensus 124 --~~~~~--------~-~~~~~~l~~~i~~~kpDiIh~~~~~~~~~~~~~~ak~~~ip~V~~~h~~~~------------ 180 (465)
T PLN02871 124 --QKVPL--------S-LALSPRIISEVARFKPDLIHASSPGIMVFGALFYAKLLCVPLVMSYHTHVP------------ 180 (465)
T ss_pred --CCcee--------e-ccCCHHHHHHHHhCCCCEEEECCCchhHHHHHHHHHHhCCCEEEEEecCch------------
Confidence 00000 0 0111246667788899999765422 23445788899999975432110
Q ss_pred cccCCCCCCCCcccCCCcccccccccccchhhhhhhhhhhcCCcccchhhhhhhccccCCcEEEEcCcCccChHHHHHHH
Q 011765 156 NDSGDHLKTPEDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLE 235 (478)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~~ 235 (478)
.+.+.. .+. .+... .+.. .....+.+|.+++.+. ...+.+.
T Consensus 181 -----------------~~~~~~---~~~-----~~~~~------~~~~---~r~~~~~ad~ii~~S~-----~~~~~l~ 221 (465)
T PLN02871 181 -----------------VYIPRY---TFS-----WLVKP------MWDI---IRFLHRAADLTLVTSP-----ALGKELE 221 (465)
T ss_pred -----------------hhhhcc---cch-----hhHHH------HHHH---HHHHHhhCCEEEECCH-----HHHHHHH
Confidence 000000 000 00000 0000 0112345677777662 2233333
Q ss_pred hhc---CCCeeeec-cCCCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccCCCHHHHHHHHHHHHhC-CCCEE
Q 011765 236 QLH---RKPVIPVG-QLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELS-KLPFF 310 (478)
Q Consensus 236 ~~~---~~~~~~vG-p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~i 310 (478)
... +.++..+. ++....-.. .....+...-+....++..+++..|+.. ....+..+++++++. +.+++
T Consensus 222 ~~~~~~~~kv~vi~nGvd~~~f~p-----~~~~~~~~~~~~~~~~~~~~i~~vGrl~--~~K~~~~li~a~~~~~~~~l~ 294 (465)
T PLN02871 222 AAGVTAANRIRVWNKGVDSESFHP-----RFRSEEMRARLSGGEPEKPLIVYVGRLG--AEKNLDFLKRVMERLPGARLA 294 (465)
T ss_pred HcCCCCcCeEEEeCCccCccccCC-----ccccHHHHHHhcCCCCCCeEEEEeCCCc--hhhhHHHHHHHHHhCCCcEEE
Confidence 322 22333332 111110000 0111122222211112235566778765 334455567777654 44545
Q ss_pred EEEecCCCCCCCCCCCCChhhhhhcCCCcEEEeccCChhh---hhcCCCceeeeecc---C-hhhHHHHHHhCCcEeccc
Q 011765 311 WVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLA---ILAHDSVGGFLTHA---G-WSSVVEALQFGMPLIVLT 383 (478)
Q Consensus 311 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~n~~~~~~vpq~~---vL~~~~~~~~ItHg---G-~~s~~eal~~GvP~l~~P 383 (478)
++-.+. .-+.+.+.....++.+..|+++.+ ++..+++ ||.-. | -+++.||+++|+|+|+..
T Consensus 295 ivG~G~----------~~~~l~~~~~~~~V~f~G~v~~~ev~~~~~~aDv--~V~pS~~E~~g~~vlEAmA~G~PVI~s~ 362 (465)
T PLN02871 295 FVGDGP----------YREELEKMFAGTPTVFTGMLQGDELSQAYASGDV--FVMPSESETLGFVVLEAMASGVPVVAAR 362 (465)
T ss_pred EEeCCh----------HHHHHHHHhccCCeEEeccCCHHHHHHHHHHCCE--EEECCcccccCcHHHHHHHcCCCEEEcC
Confidence 443211 112333333445788889998654 6677787 77432 2 357999999999999865
Q ss_pred cccchhhHHHHHhh---cCeEEEeeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhcccCChHHHHHHHHH
Q 011765 384 CYADQGLNAKLLEE---KQIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLN 460 (478)
Q Consensus 384 ~~~DQ~~na~~v~~---~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~ 460 (478)
.. .....+.+ .+.|...+.. +.+++.++|.++++ |++.++++.+-+....+.=.-+..++.+++
T Consensus 363 ~g----g~~eiv~~~~~~~~G~lv~~~------d~~~la~~i~~ll~---~~~~~~~~~~~a~~~~~~fsw~~~a~~l~~ 429 (465)
T PLN02871 363 AG----GIPDIIPPDQEGKTGFLYTPG------DVDDCVEKLETLLA---DPELRERMGAAAREEVEKWDWRAATRKLRN 429 (465)
T ss_pred CC----CcHhhhhcCCCCCceEEeCCC------CHHHHHHHHHHHHh---CHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 43 33444555 5778888764 78999999999999 666555555444443332233444455544
|
|
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.45 E-value=3.5e-10 Score=110.55 Aligned_cols=159 Identities=16% Similarity=0.128 Sum_probs=94.5
Q ss_pred CceEEEEeCcccC-CCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCCCCChhhhhhcCCCcEEEeccCChhh---hh
Q 011765 277 GSVVYVAFGSEAK-PSQEELTEIALGLELSKLPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLA---IL 352 (478)
Q Consensus 277 ~~~v~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~n~~~~~~vpq~~---vL 352 (478)
++.+++..|+... ...+.+.+.+..+...+.+++++-.+... . ..........++.+..|+++.+ ++
T Consensus 190 ~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~l~i~G~~~~~------~---~~~~~~~~~~~v~~~g~~~~~~~~~~~ 260 (359)
T cd03823 190 GRLRFGFIGQLTPHKGVDLLLEAFKRLPRGDIELVIVGNGLEL------E---EESYELEGDPRVEFLGAYPQEEIDDFY 260 (359)
T ss_pred CceEEEEEecCccccCHHHHHHHHHHHHhcCcEEEEEcCchhh------h---HHHHhhcCCCeEEEeCCCCHHHHHHHH
Confidence 4467777888664 22344444444333334555444322110 0 0000001235888889997654 57
Q ss_pred cCCCceeeee----ccCh-hhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeeccCCCCcccHHHHHHHHHHHhc
Q 011765 353 AHDSVGGFLT----HAGW-SSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLV 427 (478)
Q Consensus 353 ~~~~~~~~It----HgG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~ 427 (478)
..+++ +|+ ..|. .++.||+++|+|+|+.+. ......+.+.+.|...+.. +.+++.+++.++++
T Consensus 261 ~~ad~--~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i~~~~~g~~~~~~------d~~~l~~~i~~l~~ 328 (359)
T cd03823 261 AEIDV--LVVPSIWPENFPLVIREALAAGVPVIASDI----GGMAELVRDGVNGLLFPPG------DAEDLAAALERLID 328 (359)
T ss_pred HhCCE--EEEcCcccCCCChHHHHHHHCCCCEEECCC----CCHHHHhcCCCcEEEECCC------CHHHHHHHHHHHHh
Confidence 77887 663 2344 589999999999998654 4466667666678888764 68999999999999
Q ss_pred ccchHHHHHHHHHHHHHhcccCChHHHHHHHHHHH
Q 011765 428 EEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYL 462 (478)
Q Consensus 428 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~ 462 (478)
+++.++.+.+-....... +..++.+++.+
T Consensus 329 ---~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 357 (359)
T cd03823 329 ---DPDLLERLRAGIEPPRSI---EDQAEEYLKLY 357 (359)
T ss_pred ---ChHHHHHHHHhHHHhhhH---HHHHHHHHHHh
Confidence 666555544433332222 44555555544
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). |
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.43 E-value=4e-10 Score=111.27 Aligned_cols=352 Identities=16% Similarity=0.163 Sum_probs=180.7
Q ss_pred cEEEEecCCCc-cCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCCCCCCCCccccCCCCh
Q 011765 7 LQIAMFPWLAF-GHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVDNLRENAEATIDLPY 85 (478)
Q Consensus 7 ~~il~~~~~~~-gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~~~~~~~ 85 (478)
|||+++++|.. |.-.-...+|+.|.++||+|++++.......... .+.+.+..++.. ..+.. ....
T Consensus 1 mki~~~~~p~~gG~~~~~~~la~~L~~~G~~v~v~~~~~~~~~~~~-----~~~~~~~~~~~~---~~~~~-----~~~~ 67 (371)
T cd04962 1 MKIGIVCYPTYGGSGVVATELGKALARRGHEVHFITSSRPFRLDEY-----SPNIFFHEVEVP---QYPLF-----QYPP 67 (371)
T ss_pred CceeEEEEeCCCCccchHHHHHHHHHhcCCceEEEecCCCcchhhh-----ccCeEEEEeccc---ccchh-----hcch
Confidence 78999888755 7778899999999999999999987542211111 122555544311 11000 0000
Q ss_pred hHHHHHHHHHhhhhHHHHHHHhhcCCCEEEEcCCcc--cHHHHHHH-h---CCCeEEEecchHHHHHhhccccccccccC
Q 011765 86 DEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAAY--WLPARARE-L---GIPSGFFSIFTAATLGYFGPSSVLINDSG 159 (478)
Q Consensus 86 ~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~~--~~~~~A~~-l---gIP~i~~~~~~~~~~~~~~~~~~~~~~~~ 159 (478)
+ .......+.+++++.+||+|......+ ....++.. . ++|++......... .
T Consensus 68 ----~----~~~~~~~l~~~i~~~~~divh~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~--~------------ 125 (371)
T cd04962 68 ----Y----DLALASKIAEVAKRYKLDLLHVHYAVPHAVAAYLAREILGKKDLPVVTTLHGTDIT--L------------ 125 (371)
T ss_pred ----h----HHHHHHHHHHHHhcCCccEEeecccCCccHHHHHHHHhcCcCCCcEEEEEcCCccc--c------------
Confidence 0 011234666777888999998764332 22233332 2 78988653311000 0
Q ss_pred CCCCCCCcccCCCcccccccccccchhhhhhhhhhhcCCcccchhhhhhhccccCCcEEEEcCcCccChHHHHHHHhhc-
Q 011765 160 DHLKTPEDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLH- 238 (478)
Q Consensus 160 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~~~~~- 238 (478)
....+ .+. . ........+|.+++.+ ....+.....+
T Consensus 126 ------------~~~~~-----~~~------------------~---~~~~~~~~~d~ii~~s-----~~~~~~~~~~~~ 162 (371)
T cd04962 126 ------------VGQDP-----SFQ------------------P---ATRFSIEKSDGVTAVS-----ESLRQETYELFD 162 (371)
T ss_pred ------------ccccc-----cch------------------H---HHHHHHhhCCEEEEcC-----HHHHHHHHHhcC
Confidence 00000 000 0 0011234567777766 22233333332
Q ss_pred -CCCeeeeccCCCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccC-CCHHHHHHHHHHHH-hCCCCEEEEEec
Q 011765 239 -RKPVIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAK-PSQEELTEIALGLE-LSKLPFFWVLKK 315 (478)
Q Consensus 239 -~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~-~~~~~~~~~~~al~-~~~~~~i~~~~~ 315 (478)
+.++..+.......... ............... +..+++.+|.... ...+.+.+.+..+. +.+.+++++-.+
T Consensus 163 ~~~~i~vi~n~~~~~~~~-----~~~~~~~~~~~~~~~-~~~~il~~g~l~~~K~~~~li~a~~~l~~~~~~~l~i~G~g 236 (371)
T cd04962 163 ITKEIEVIPNFVDEDRFR-----PKPDEALKRRLGAPE-GEKVLIHISNFRPVKRIDDVIRIFAKVRKEVPARLLLVGDG 236 (371)
T ss_pred CcCCEEEecCCcCHhhcC-----CCchHHHHHhcCCCC-CCeEEEEecccccccCHHHHHHHHHHHHhcCCceEEEEcCC
Confidence 23455554222111100 111122222222222 3366777887664 22233333333332 234555554322
Q ss_pred CCCCCCCCCCCCChhhhhhcC-CCcEEEeccCCh-hhhhcCCCceeeee---c-cChhhHHHHHHhCCcEeccccccchh
Q 011765 316 RLGQADTEPIELPDGFEERTR-GRGVVYTSWAPQ-LAILAHDSVGGFLT---H-AGWSSVVEALQFGMPLIVLTCYADQG 389 (478)
Q Consensus 316 ~~~~~~~~~~~~p~~~~~~~~-~~n~~~~~~vpq-~~vL~~~~~~~~It---H-gG~~s~~eal~~GvP~l~~P~~~DQ~ 389 (478)
. ....+- ....+.. .+++.+..+.++ .+++..+++ +|. . |.-.++.||+++|+|+|+.. ..
T Consensus 237 ~------~~~~~~-~~~~~~~~~~~v~~~g~~~~~~~~~~~~d~--~v~ps~~E~~~~~~~EAma~g~PvI~s~----~~ 303 (371)
T cd04962 237 P------ERSPAE-RLARELGLQDDVLFLGKQDHVEELLSIADL--FLLPSEKESFGLAALEAMACGVPVVASN----AG 303 (371)
T ss_pred c------CHHHHH-HHHHHcCCCceEEEecCcccHHHHHHhcCE--EEeCCCcCCCccHHHHHHHcCCCEEEeC----CC
Confidence 1 111110 1111111 346777777765 557777887 652 2 33469999999999999954 44
Q ss_pred hHHHHHhhcCeEEEeeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHh-cccCChHHHHHHHHHHHHh
Q 011765 390 LNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLF-GDKGRHDRYVDNFLNYLKN 464 (478)
Q Consensus 390 ~na~~v~~~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~-~~~~~~~~~~~~i~~~~~~ 464 (478)
..+..+++-..|...+.. +.+++.+++.++++ ++..++++.+-+... .+.-+.+..++.+.+.+++
T Consensus 304 ~~~e~i~~~~~G~~~~~~------~~~~l~~~i~~l~~---~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~~ 370 (371)
T cd04962 304 GIPEVVKHGETGFLVDVG------DVEAMAEYALSLLE---DDELWQEFSRAARNRAAERFDSERIVPQYEALYRR 370 (371)
T ss_pred CchhhhcCCCceEEcCCC------CHHHHHHHHHHHHh---CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 556666666678776653 78999999999998 666555544444433 3334445566666666543
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.43 E-value=2.2e-11 Score=108.55 Aligned_cols=301 Identities=15% Similarity=0.137 Sum_probs=188.4
Q ss_pred cEEEEecCC----CccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCCCCCCCCccccCC
Q 011765 7 LQIAMFPWL----AFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVDNLRENAEATID 82 (478)
Q Consensus 7 ~~il~~~~~----~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~~~~ 82 (478)
|||+|.+=+ +.||+.+++.||++|.++|..++|++.....+.+.+.. ..+.+...
T Consensus 1 M~V~i~~Dgg~~iGmGHV~R~l~LA~~l~k~~~~~~fl~k~~~e~~~~~~~----~~f~~~~~----------------- 59 (318)
T COG3980 1 MKVLIRCDGGLEIGMGHVMRTLTLARELEKRGFACLFLTKQDIEAIIHKVY----EGFKVLEG----------------- 59 (318)
T ss_pred CcEEEEecCCcccCcchhhhHHHHHHHHHhcCceEEEecccchhhhhhhhh----hhccceee-----------------
Confidence 789998655 45999999999999999999999999888654332211 00110000
Q ss_pred CChhHHHHHHHHHhhhhHHHHHHHhhcCCCEEEEcCCcccH---HHHHHHhCCCeEEEecchHHHHHhhccccccccccC
Q 011765 83 LPYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAAYWL---PARARELGIPSGFFSIFTAATLGYFGPSSVLINDSG 159 (478)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~~~~---~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~~~~~ 159 (478)
...+.+++.++|++|.|.+...+ -.+..+++.+.+.+-......+..
T Consensus 60 ------------------~~~n~ik~~k~d~lI~Dsygl~~dd~k~ik~e~~~k~l~fDd~~~~~~~d------------ 109 (318)
T COG3980 60 ------------------RGNNLIKEEKFDLLIFDSYGLNADDFKLIKEEAGSKILIFDDENAKSFKD------------ 109 (318)
T ss_pred ------------------ecccccccccCCEEEEeccCCCHHHHHHHHHHhCCcEEEecCCCccchhh------------
Confidence 00015678899999999988755 357778999999884422211110
Q ss_pred CCCCCCCcccCCCcccccccccccchhhhhhhhhhhcCCcccchhhhhhhccccCCcEEEEcCcCccChHHHHHHHhhcC
Q 011765 160 DHLKTPEDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLHR 239 (478)
Q Consensus 160 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~~~~~~ 239 (478)
... ..+.. ....+ +. ...|
T Consensus 110 ---------------~d~-----------------------ivN~~------~~a~~------~y-----------~~v~ 128 (318)
T COG3980 110 ---------------NDL-----------------------IVNAI------LNAND------YY-----------GLVP 128 (318)
T ss_pred ---------------hHh-----------------------hhhhh------hcchh------hc-----------cccC
Confidence 000 00000 00000 00 0011
Q ss_pred CC-eeeeccCCCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccCCCHHHHHHHHHHHHhCCCCEEEEEecCCC
Q 011765 240 KP-VIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELSKLPFFWVLKKRLG 318 (478)
Q Consensus 240 ~~-~~~vGp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~ 318 (478)
.+ -++.||-....++. .-.++.-.-++ ++.-|+|++|..- ......+++..|.+..+.+.++++..
T Consensus 129 ~k~~~~lGp~y~~lr~e--------F~~~r~~~~~r-~~r~ilI~lGGsD--pk~lt~kvl~~L~~~~~nl~iV~gs~-- 195 (318)
T COG3980 129 NKTRYYLGPGYAPLRPE--------FYALREENTER-PKRDILITLGGSD--PKNLTLKVLAELEQKNVNLHIVVGSS-- 195 (318)
T ss_pred cceEEEecCCceeccHH--------HHHhHHHHhhc-chheEEEEccCCC--hhhhHHHHHHHhhccCeeEEEEecCC--
Confidence 11 24445443222110 00011111111 2346999998643 34567778888888887777777632
Q ss_pred CCCCCCCCCChhhhhhc-CCCcEEEeccCC-hhhhhcCCCceeeeeccChhhHHHHHHhCCcEeccccccchhhHHHHHh
Q 011765 319 QADTEPIELPDGFEERT-RGRGVVYTSWAP-QLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQGLNAKLLE 396 (478)
Q Consensus 319 ~~~~~~~~~p~~~~~~~-~~~n~~~~~~vp-q~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~ 396 (478)
...+.++.++. ..+|+....... ...++..+++ .|+.||. |+.|++..|+|.+++|+...|--.|+..+
T Consensus 196 ------~p~l~~l~k~~~~~~~i~~~~~~~dma~LMke~d~--aI~AaGs-tlyEa~~lgvP~l~l~~a~NQ~~~a~~f~ 266 (318)
T COG3980 196 ------NPTLKNLRKRAEKYPNINLYIDTNDMAELMKEADL--AISAAGS-TLYEALLLGVPSLVLPLAENQIATAKEFE 266 (318)
T ss_pred ------CcchhHHHHHHhhCCCeeeEecchhHHHHHHhcch--heeccch-HHHHHHHhcCCceEEeeeccHHHHHHHHH
Confidence 22223333333 245665544444 3457877888 9999875 79999999999999999999999999999
Q ss_pred hcCeEEEeeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhcccC
Q 011765 397 EKQIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFGDKG 449 (478)
Q Consensus 397 ~~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~ 449 (478)
.+|+-..+... +++..+...+.++.. |...|++.-.-++.+-+.-
T Consensus 267 ~lg~~~~l~~~-----l~~~~~~~~~~~i~~---d~~~rk~l~~~~~~i~dg~ 311 (318)
T COG3980 267 ALGIIKQLGYH-----LKDLAKDYEILQIQK---DYARRKNLSFGSKLIGDGR 311 (318)
T ss_pred hcCchhhccCC-----CchHHHHHHHHHhhh---CHHHhhhhhhccceeeccc
Confidence 99998888765 578888888888988 7888887776666655443
|
|
| >PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.40 E-value=7.9e-14 Score=117.40 Aligned_cols=126 Identities=22% Similarity=0.286 Sum_probs=81.3
Q ss_pred EEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCCCCCCCCccccCCCChhHH
Q 011765 9 IAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVDNLRENAEATIDLPYDEV 88 (478)
Q Consensus 9 il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~~~~~~~~~~ 88 (478)
|+|++.++.||++|+++||++|++|||+|++++++.+.+.+++.| ++|+.++.. ..++.... .........
T Consensus 1 Ili~~~Gt~Ghv~P~lala~~L~~rGh~V~~~~~~~~~~~v~~~G------l~~~~~~~~--~~~~~~~~-~~~~~~~~~ 71 (139)
T PF03033_consen 1 ILIATGGTRGHVYPFLALARALRRRGHEVRLATPPDFRERVEAAG------LEFVPIPGD--SRLPRSLE-PLANLRRLA 71 (139)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHTT-EEEEEETGGGHHHHHHTT-------EEEESSSC--GGGGHHHH-HHHHHHCHH
T ss_pred CEEEEcCChhHHHHHHHHHHHHhccCCeEEEeecccceecccccC------ceEEEecCC--cCcCcccc-hhhhhhhHH
Confidence 789999999999999999999999999999999999999999888 999999731 00100000 000000001
Q ss_pred H---HHHHHHhhhhHHHHHHH----hhcCCCEEEEcCCcccHHHHHHHhCCCeEEEecchHH
Q 011765 89 K---YLKQSFDCLEEPMAKLL----QSLAPDWLLFDFAAYWLPARARELGIPSGFFSIFTAA 143 (478)
Q Consensus 89 ~---~~~~~~~~~~~~l~~ll----~~~~pD~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~~ 143 (478)
. .+......+.+...+.+ ....+|+++.+.....+..+|+++|||++.....+.+
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~vaE~~~iP~~~~~~~p~~ 133 (139)
T PF03033_consen 72 RLIRGLEEAMRILARFRPDLVVAAGGYVADDVIIAAPLAFAAALVAEQLGIPGVANRLFPWF 133 (139)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCCHCTTTTECCEECHHHHHTHHHHHHHHHTS-EEEEESSGGG
T ss_pred HHhhhhhHHHHHhhccCcchhhhccCcccchHHHhhhhcCccceeEhhhCchHHHHhhCCcC
Confidence 1 11111111111111111 1125788888888888899999999999998776654
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B .... |
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.36 E-value=7e-10 Score=109.49 Aligned_cols=144 Identities=18% Similarity=0.163 Sum_probs=88.5
Q ss_pred CceEEEEeCcccC-CCHHHHHHHHHHHHhC-CCCEEEEEecCCCCCCCCCCCCChhhh---hhcCCCcEEEeccCChhh-
Q 011765 277 GSVVYVAFGSEAK-PSQEELTEIALGLELS-KLPFFWVLKKRLGQADTEPIELPDGFE---ERTRGRGVVYTSWAPQLA- 350 (478)
Q Consensus 277 ~~~v~vs~Gs~~~-~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~~p~~~~---~~~~~~n~~~~~~vpq~~- 350 (478)
++.+++..|+... .+.+.+...++.+.+. +.+++++ +.+. ..+.+. .....+|+.+..++++.+
T Consensus 219 ~~~~i~~~G~~~~~k~~~~l~~~~~~l~~~~~~~l~i~-G~~~---------~~~~~~~~~~~~~~~~v~~~g~~~~~~~ 288 (394)
T cd03794 219 DKFVVLYAGNIGRAQGLDTLLEAAALLKDRPDIRFLIV-GDGP---------EKEELKELAKALGLDNVTFLGRVPKEEL 288 (394)
T ss_pred CcEEEEEecCcccccCHHHHHHHHHHHhhcCCeEEEEe-CCcc---------cHHHHHHHHHHcCCCcEEEeCCCChHHH
Confidence 4577778888764 2334455544544433 4444433 2211 111122 123446888888998754
Q ss_pred --hhcCCCceeeeeccC---------hhhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeeccCCCCcccHHHHH
Q 011765 351 --ILAHDSVGGFLTHAG---------WSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVA 419 (478)
Q Consensus 351 --vL~~~~~~~~ItHgG---------~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~~~~~~~~~l~ 419 (478)
++..+++ +|.... -+++.||+++|+|+|+.+..+.+. .+.+.+.|...+.. +.++++
T Consensus 289 ~~~~~~~di--~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~----~~~~~~~g~~~~~~------~~~~l~ 356 (394)
T cd03794 289 PELLAAADV--GLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAE----LVEEAGAGLVVPPG------DPEALA 356 (394)
T ss_pred HHHHHhhCe--eEEeccCcccccccCchHHHHHHHCCCcEEEecCCCchh----hhccCCcceEeCCC------CHHHHH
Confidence 5677777 663222 245799999999999987665433 33344677777654 789999
Q ss_pred HHHHHHhcccchHHHHHHHHHHHHHh
Q 011765 420 ESLRLVLVEEKGQIYRDKAKEMKGLF 445 (478)
Q Consensus 420 ~~i~~ll~~~~~~~~~~~a~~~~~~~ 445 (478)
++|.++++ |++.++++.+-+...
T Consensus 357 ~~i~~~~~---~~~~~~~~~~~~~~~ 379 (394)
T cd03794 357 AAILELLD---DPEERAEMGENGRRY 379 (394)
T ss_pred HHHHHHHh---ChHHHHHHHHHHHHH
Confidence 99999998 666666555544443
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. |
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.36 E-value=2.7e-09 Score=103.93 Aligned_cols=327 Identities=16% Similarity=0.109 Sum_probs=171.0
Q ss_pred EEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCcccc-CCCCCCCCCCCeEEEEecCCCCCCCCCCccccCCCChh
Q 011765 8 QIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDR-LPRLPQNLASMIQFVKISLPHVDNLRENAEATIDLPYD 86 (478)
Q Consensus 8 ~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~-~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~~~~~~~~ 86 (478)
||++++....|+...+..++++|.++||+|++++....... ....+ +.+..++.... . ....
T Consensus 1 kIl~i~~~~~g~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~------~~~~~~~~~~~-----~-----~~~~- 63 (359)
T cd03808 1 KILHIVTVDGGLYSFRLPLIKALRAAGYEVHVVAPPGDELEELEALG------VKVIPIPLDRR-----G-----INPF- 63 (359)
T ss_pred CeeEEEecchhHHHHHHHHHHHHHhcCCeeEEEecCCCcccccccCC------ceEEecccccc-----c-----cChH-
Confidence 58888877789999999999999999999999998766542 23333 66666652110 0 0010
Q ss_pred HHHHHHHHHhhhhHHHHHHHhhcCCCEEEEcCCccc--HHHHHHHhCCCeEEEecchHHHHHhhccccccccccCCCCCC
Q 011765 87 EVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAAYW--LPARARELGIPSGFFSIFTAATLGYFGPSSVLINDSGDHLKT 164 (478)
Q Consensus 87 ~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~~~--~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (478)
..+. ....+.+++++.+||+|++....+. +..++...+.|.+...........
T Consensus 64 --~~~~-----~~~~~~~~~~~~~~dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~------------------ 118 (359)
T cd03808 64 --KDLK-----ALLRLYRLLRKERPDIVHTHTPKPGILGRLAARLAGVPKVIYTVHGLGFVF------------------ 118 (359)
T ss_pred --hHHH-----HHHHHHHHHHhcCCCEEEEccccchhHHHHHHHHcCCCCEEEEecCcchhh------------------
Confidence 0111 1124566777889999998854432 334455466665554321110000
Q ss_pred CCcccCCCcccccccccccchhhhhhhhhhhcCCcccchhhhhhhccccCCcEEEEcCcCccChHHHHHHHhhcC---CC
Q 011765 165 PEDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLHR---KP 241 (478)
Q Consensus 165 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~~~~~~---~~ 241 (478)
.... . ...+. .... ......+|.+++.+ ....+....... ..
T Consensus 119 ---------~~~~-----~----~~~~~----------~~~~--~~~~~~~d~ii~~s-----~~~~~~~~~~~~~~~~~ 163 (359)
T cd03808 119 ---------TSGG-----L----KRRLY----------LLLE--RLALRFTDKVIFQN-----EDDRDLALKLGIIKKKK 163 (359)
T ss_pred ---------ccch-----h----HHHHH----------HHHH--HHHHhhccEEEEcC-----HHHHHHHHHhcCCCcCc
Confidence 0000 0 00000 0000 01123457777766 222333333221 12
Q ss_pred eeeeccCCCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccC-CCHHHHHHHHHHHHhCC--CCEEEEEecCCC
Q 011765 242 VIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAK-PSQEELTEIALGLELSK--LPFFWVLKKRLG 318 (478)
Q Consensus 242 ~~~vGp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~-~~~~~~~~~~~al~~~~--~~~i~~~~~~~~ 318 (478)
...+.|........ ...... ..+++.+++..|+... ...+.+.+.++.+.+.+ .+++++-.+...
T Consensus 164 ~~~~~~~~~~~~~~-----~~~~~~-------~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~~~l~i~G~~~~~ 231 (359)
T cd03808 164 TVLIPGSGVDLDRF-----SPSPEP-------IPEDDPVFLFVARLLKDKGIDELLEAARILKAKGPNVRLLLVGDGDEE 231 (359)
T ss_pred eEEecCCCCChhhc-----Cccccc-------cCCCCcEEEEEeccccccCHHHHHHHHHHHHhcCCCeEEEEEcCCCcc
Confidence 33333222211100 000000 1234578888888764 23344555555554323 343433222111
Q ss_pred CCCCCCCCCChh-hhhhcCCCcEEEeccCCh-hhhhcCCCceeeeecc----ChhhHHHHHHhCCcEeccccccchhhHH
Q 011765 319 QADTEPIELPDG-FEERTRGRGVVYTSWAPQ-LAILAHDSVGGFLTHA----GWSSVVEALQFGMPLIVLTCYADQGLNA 392 (478)
Q Consensus 319 ~~~~~~~~~p~~-~~~~~~~~n~~~~~~vpq-~~vL~~~~~~~~ItHg----G~~s~~eal~~GvP~l~~P~~~DQ~~na 392 (478)
...-.. ........++.+..+..+ ..++..+++ +|.-. -.+++.||+++|+|+|+.+.. ...
T Consensus 232 ------~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~adi--~i~ps~~e~~~~~~~Ea~~~G~Pvi~s~~~----~~~ 299 (359)
T cd03808 232 ------NPAAILEIEKLGLEGRVEFLGFRDDVPELLAAADV--FVLPSYREGLPRVLLEAMAMGRPVIATDVP----GCR 299 (359)
T ss_pred ------hhhHHHHHHhcCCcceEEEeeccccHHHHHHhccE--EEecCcccCcchHHHHHHHcCCCEEEecCC----Cch
Confidence 000000 111112346777776544 557888888 66433 247899999999999996543 345
Q ss_pred HHHhhcCeEEEeeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHH
Q 011765 393 KLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGL 444 (478)
Q Consensus 393 ~~v~~~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~ 444 (478)
..+.+.+.|...+.. +.+++.+++.+++. +++.++++.+-+..
T Consensus 300 ~~i~~~~~g~~~~~~------~~~~~~~~i~~l~~---~~~~~~~~~~~~~~ 342 (359)
T cd03808 300 EAVIDGVNGFLVPPG------DAEALADAIERLIE---DPELRARMGQAARK 342 (359)
T ss_pred hhhhcCcceEEECCC------CHHHHHHHHHHHHh---CHHHHHHHHHHHHH
Confidence 556666778777653 78999999999998 66655554444333
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. |
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.36 E-value=4.1e-09 Score=105.15 Aligned_cols=93 Identities=15% Similarity=0.100 Sum_probs=67.0
Q ss_pred CCcEEEeccCChhh---hhcCCCceeee--e-ccCh-hhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeeccCC
Q 011765 337 GRGVVYTSWAPQLA---ILAHDSVGGFL--T-HAGW-SSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEG 409 (478)
Q Consensus 337 ~~n~~~~~~vpq~~---vL~~~~~~~~I--t-HgG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~ 409 (478)
.+++.+..++|+.+ ++..+++ +| + +.|. +++.||+++|+|+|+. |.......+.+-..|..++..
T Consensus 280 ~~~V~f~G~v~~~~~~~~l~~adv--~v~~s~~e~~~~~llEAmA~G~PVIas----~~~g~~e~i~~~~~G~lv~~~-- 351 (396)
T cd03818 280 LSRVHFLGRVPYDQYLALLQVSDV--HVYLTYPFVLSWSLLEAMACGCLVVGS----DTAPVREVITDGENGLLVDFF-- 351 (396)
T ss_pred cceEEEeCCCCHHHHHHHHHhCcE--EEEcCcccccchHHHHHHHCCCCEEEc----CCCCchhhcccCCceEEcCCC--
Confidence 46788999999855 5667787 55 3 2333 4899999999999985 444566666665678877654
Q ss_pred CCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHH
Q 011765 410 DGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGL 444 (478)
Q Consensus 410 ~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~ 444 (478)
++++++++|.++++ +++.++++.+-+..
T Consensus 352 ----d~~~la~~i~~ll~---~~~~~~~l~~~ar~ 379 (396)
T cd03818 352 ----DPDALAAAVIELLD---DPARRARLRRAARR 379 (396)
T ss_pred ----CHHHHHHHHHHHHh---CHHHHHHHHHHHHH
Confidence 78999999999999 66655554444333
|
ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). |
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.4e-09 Score=106.81 Aligned_cols=325 Identities=16% Similarity=0.110 Sum_probs=165.7
Q ss_pred EEEEec----CCCccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCCCCCCCCccccCCC
Q 011765 8 QIAMFP----WLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVDNLRENAEATIDL 83 (478)
Q Consensus 8 ~il~~~----~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~~~~~ 83 (478)
||++++ ....|+-.....++++|.++||+|+++++........... ..+...+ .. ...
T Consensus 1 kil~~~~~~~p~~~G~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~------~~~~~~~--------~~----~~~ 62 (374)
T cd03817 1 KIGIFTDTYLPQVNGVATSIRRLAEELEKRGHEVYVVAPSYPGAPEEEEV------VVVRPFR--------VP----TFK 62 (374)
T ss_pred CeeEeehhccCCCCCeehHHHHHHHHHHHcCCeEEEEeCCCCCCCccccc------ccccccc--------cc----cch
Confidence 455553 2355899999999999999999999998766543222111 1111110 00 000
Q ss_pred ChhHHHHHHHHHhhhhHHHHHHHhhcCCCEEEEcCCcc---cHHHHHHHhCCCeEEEecchHHHHHhhccccccccccCC
Q 011765 84 PYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAAY---WLPARARELGIPSGFFSIFTAATLGYFGPSSVLINDSGD 160 (478)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~~---~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (478)
. .. ..........+...++..+||+|++..... .+..+++..++|++.................
T Consensus 63 ~----~~-~~~~~~~~~~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-------- 129 (374)
T cd03817 63 Y----PD-FRLPLPIPRALIIILKELGPDIVHTHTPFSLGLLGLRVARKLGIPVVATYHTMYEDYTHYVPLG-------- 129 (374)
T ss_pred h----hh-hhccccHHHHHHHHHhhcCCCEEEECCchhhhhHHHHHHHHcCCCEEEEecCCHHHHHHHHhcc--------
Confidence 0 00 000011223444567788999998875332 2446778899999876553332111100000
Q ss_pred CCCCCCcccCCCcccccccccccchhhhhhhhhhhcCCcccchhhhhhhccccCCcEEEEcCcCccChHHHHHHHhhc-C
Q 011765 161 HLKTPEDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLH-R 239 (478)
Q Consensus 161 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~~~~~-~ 239 (478)
.. .... .+ . ..........+|.+++.+.. ..+...... +
T Consensus 130 ------------~~--------~~~~---~~-----------~-~~~~~~~~~~~d~i~~~s~~-----~~~~~~~~~~~ 169 (374)
T cd03817 130 ------------RL--------LARA---VV-----------R-RKLSRRFYNRCDAVIAPSEK-----IADLLREYGVK 169 (374)
T ss_pred ------------cc--------hhHH---HH-----------H-HHHHHHHhhhCCEEEeccHH-----HHHHHHhcCCC
Confidence 00 0000 00 0 01112234567777776632 222222221 2
Q ss_pred CCeeeeccCCCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccC-CCHHHHHHHHHHHHh--CCCCEEEEEecC
Q 011765 240 KPVIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAK-PSQEELTEIALGLEL--SKLPFFWVLKKR 316 (478)
Q Consensus 240 ~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~-~~~~~~~~~~~al~~--~~~~~i~~~~~~ 316 (478)
.++..+.+-....... .........-+.. .+++.+++..|+... .+.+.+..++..+.. .+.+++++-++.
T Consensus 170 ~~~~vi~~~~~~~~~~-----~~~~~~~~~~~~~-~~~~~~i~~~G~~~~~k~~~~l~~~~~~~~~~~~~~~l~i~G~~~ 243 (374)
T cd03817 170 RPIEVIPTGIDLDRFE-----PVDGDDERRKLGI-PEDEPVLLYVGRLAKEKNIDFLIRAFARLLKEEPDVKLVIVGDGP 243 (374)
T ss_pred CceEEcCCccchhccC-----ccchhHHHHhcCC-CCCCeEEEEEeeeecccCHHHHHHHHHHHHHhCCCeEEEEEeCCc
Confidence 2233333211111000 0001100001111 223466677787664 234555555555544 234444432211
Q ss_pred CCCCCCCCCCCChhhhhh---c-CCCcEEEeccCChhh---hhcCCCceeeeec----cChhhHHHHHHhCCcEeccccc
Q 011765 317 LGQADTEPIELPDGFEER---T-RGRGVVYTSWAPQLA---ILAHDSVGGFLTH----AGWSSVVEALQFGMPLIVLTCY 385 (478)
Q Consensus 317 ~~~~~~~~~~~p~~~~~~---~-~~~n~~~~~~vpq~~---vL~~~~~~~~ItH----gG~~s~~eal~~GvP~l~~P~~ 385 (478)
.-+.+.+. . ..+++.+..++|+.+ ++..+++ +|.- ++.+++.||+++|+|+|+..
T Consensus 244 ----------~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~l~~s~~e~~~~~~~Ea~~~g~PvI~~~-- 309 (374)
T cd03817 244 ----------EREELEELARELGLADRVIFTGFVPREELPDYYKAADL--FVFASTTETQGLVLLEAMAAGLPVVAVD-- 309 (374)
T ss_pred ----------hHHHHHHHHHHcCCCCcEEEeccCChHHHHHHHHHcCE--EEecccccCcChHHHHHHHcCCcEEEeC--
Confidence 01112211 1 245888889998754 5777888 6633 33478999999999999854
Q ss_pred cchhhHHHHHhhcCeEEEeeccCCCCcccHHHHHHHHHHHhcccchHHHH
Q 011765 386 ADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYR 435 (478)
Q Consensus 386 ~DQ~~na~~v~~~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~ 435 (478)
....+..+.+.+.|..++..+ . ++.+++.++++ +++.+
T Consensus 310 --~~~~~~~i~~~~~g~~~~~~~------~-~~~~~i~~l~~---~~~~~ 347 (374)
T cd03817 310 --APGLPDLVADGENGFLFPPGD------E-ALAEALLRLLQ---DPELR 347 (374)
T ss_pred --CCChhhheecCceeEEeCCCC------H-HHHHHHHHHHh---ChHHH
Confidence 445566677778888887653 3 89999999999 55533
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. |
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.8e-09 Score=105.36 Aligned_cols=342 Identities=17% Similarity=0.068 Sum_probs=179.0
Q ss_pred ccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCCCCCCCCccccCCCChhHHHHHHHHHh
Q 011765 17 FGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVDNLRENAEATIDLPYDEVKYLKQSFD 96 (478)
Q Consensus 17 ~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (478)
.|+...+..+++.|.+.||+|++++............ ..... ... ..... ........
T Consensus 14 ~G~~~~~~~l~~~L~~~g~~v~i~~~~~~~~~~~~~~-------~~~~~-----~~~-----~~~~~-----~~~~~~~~ 71 (374)
T cd03801 14 GGAERHVLELARALAARGHEVTVLTPGDGGLPDEEEV-------GGIVV-----VRP-----PPLLR-----VRRLLLLL 71 (374)
T ss_pred CcHhHHHHHHHHHHHhcCceEEEEecCCCCCCceeee-------cCcce-----ecC-----Ccccc-----cchhHHHH
Confidence 6889999999999999999999999876654322111 00000 000 00000 00111111
Q ss_pred hhhHHHHHHHhhcCCCEEEEcCCcccHH--HHHHHhCCCeEEEecchHHHHHhhccccccccccCCCCCCCCcccCCCcc
Q 011765 97 CLEEPMAKLLQSLAPDWLLFDFAAYWLP--ARARELGIPSGFFSIFTAATLGYFGPSSVLINDSGDHLKTPEDYTRVPNW 174 (478)
Q Consensus 97 ~~~~~l~~ll~~~~pD~vI~D~~~~~~~--~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (478)
.....+...++..+||+|+......... ..+...++|++............ .
T Consensus 72 ~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~--------------------------~ 125 (374)
T cd03801 72 LLALRLRRLLRRERFDVVHAHDWLALLAAALAARLLGIPLVLTVHGLEFGRPG--------------------------N 125 (374)
T ss_pred HHHHHHHHHhhhcCCcEEEEechhHHHHHHHHHHhcCCcEEEEeccchhhccc--------------------------c
Confidence 2233556667778999999886555433 47888899999765422211000 0
Q ss_pred cccccccccchhhhhhhhhhhcCCcccchhhhhhhccccCCcEEEEcCcCccChHHHHHHHhhcCC---CeeeeccCCCC
Q 011765 175 VSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLHRK---PVIPVGQLPTT 251 (478)
Q Consensus 175 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~~~~~~~---~~~~vGp~~~~ 251 (478)
. . ..... ............++.+++.+ ....+.+...++. ++..+..-...
T Consensus 126 ----~----~-~~~~~------------~~~~~~~~~~~~~d~~i~~s-----~~~~~~~~~~~~~~~~~~~~i~~~~~~ 179 (374)
T cd03801 126 ----E----L-GLLLK------------LARALERRALRRADRIIAVS-----EATREELRELGGVPPEKITVIPNGVDT 179 (374)
T ss_pred ----c----h-hHHHH------------HHHHHHHHHHHhCCEEEEec-----HHHHHHHHhcCCCCCCcEEEecCcccc
Confidence 0 0 00000 00001122244667777766 3333444444432 45555432211
Q ss_pred CCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccC-CCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCCCCChh
Q 011765 252 TGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAK-PSQEELTEIALGLELSKLPFFWVLKKRLGQADTEPIELPDG 330 (478)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~ 330 (478)
.... ... .+..... ...+++.+++.+|+... .+.+.+...+..+......+-+.+-+.. .....
T Consensus 180 ~~~~-----~~~-~~~~~~~-~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~~~l~i~G~~--------~~~~~ 244 (374)
T cd03801 180 ERFR-----PAP-RAARRRL-GIPEDEPVILFVGRLVPRKGVDLLLEALAKLRKEYPDVRLVIVGDG--------PLREE 244 (374)
T ss_pred cccC-----ccc-hHHHhhc-CCcCCCeEEEEecchhhhcCHHHHHHHHHHHhhhcCCeEEEEEeCc--------HHHHH
Confidence 1100 000 1111111 11223467777887663 2223333333333332222322222211 11111
Q ss_pred hhh----hcCCCcEEEeccCChh---hhhcCCCceeeee----ccChhhHHHHHHhCCcEeccccccchhhHHHHHhhcC
Q 011765 331 FEE----RTRGRGVVYTSWAPQL---AILAHDSVGGFLT----HAGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQ 399 (478)
Q Consensus 331 ~~~----~~~~~n~~~~~~vpq~---~vL~~~~~~~~It----HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g 399 (478)
+.+ .....++.+..++++. .++..+++ +|. -|..+++.||+++|+|+|+.+. ...+..+.+.+
T Consensus 245 ~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di--~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~----~~~~~~~~~~~ 318 (374)
T cd03801 245 LEALAAELGLGDRVTFLGFVPDEDLPALYAAADV--FVLPSLYEGFGLVLLEAMAAGLPVVASDV----GGIPEVVEDGE 318 (374)
T ss_pred HHHHHHHhCCCcceEEEeccChhhHHHHHHhcCE--EEecchhccccchHHHHHHcCCcEEEeCC----CChhHHhcCCc
Confidence 111 1134588888999754 46777777 663 2456799999999999998655 45666676677
Q ss_pred eEEEeeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHH-HhcccCChHHHHHHHHHHH
Q 011765 400 IVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKG-LFGDKGRHDRYVDNFLNYL 462 (478)
Q Consensus 400 ~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~-~~~~~~~~~~~~~~i~~~~ 462 (478)
.|...+.. +.+++.++|.++++ +++.++++.+-+. .+.+.-..+..++.+.+.+
T Consensus 319 ~g~~~~~~------~~~~l~~~i~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (374)
T cd03801 319 TGLLVPPG------DPEALAEAILRLLD---DPELRRRLGEAARERVAERFSWDRVAARTEEVY 373 (374)
T ss_pred ceEEeCCC------CHHHHHHHHHHHHc---ChHHHHHHHHHHHHHHHHhcCHHHHHHHHHHhh
Confidence 88877653 68999999999999 6665555444433 4444444455556555543
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. |
| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=2e-08 Score=100.86 Aligned_cols=117 Identities=12% Similarity=0.150 Sum_probs=78.2
Q ss_pred CcEEEeccCChhh---hhcCCCceeeeeccCh------hhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeeccC
Q 011765 338 RGVVYTSWAPQLA---ILAHDSVGGFLTHAGW------SSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDE 408 (478)
Q Consensus 338 ~n~~~~~~vpq~~---vL~~~~~~~~ItHgG~------~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~ 408 (478)
+|+.+..|+|+.+ +++.+++.++.+..+. +.+.|++++|+|+|+....+.. ....+. +.|...+..
T Consensus 284 ~~v~f~G~~~~~~~~~~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~--~~~~i~--~~G~~~~~~- 358 (412)
T PRK10307 284 PNVHFLPLQPYDRLPALLKMADCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTE--LGQLVE--GIGVCVEPE- 358 (412)
T ss_pred CceEEeCCCCHHHHHHHHHhcCEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCch--HHHHHh--CCcEEeCCC-
Confidence 4788889998754 6778888544444332 3478999999999997654321 122333 678888754
Q ss_pred CCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhc-ccCChHHHHHHHHHHHHhccc
Q 011765 409 GDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFG-DKGRHDRYVDNFLNYLKNHRC 467 (478)
Q Consensus 409 ~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~ 467 (478)
+.++++++|.++++ |++.++++.+-+.... +.=..+..++.+++.+++...
T Consensus 359 -----d~~~la~~i~~l~~---~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~ 410 (412)
T PRK10307 359 -----SVEALVAAIAALAR---QALLRPKLGTVAREYAERTLDKENVLRQFIADIRGLVA 410 (412)
T ss_pred -----CHHHHHHHHHHHHh---CHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhc
Confidence 78999999999998 6666555555444432 333445677777777766543
|
|
| >PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length | Back alignment and domain information |
|---|
Probab=99.29 E-value=2.8e-09 Score=101.51 Aligned_cols=301 Identities=18% Similarity=0.154 Sum_probs=160.4
Q ss_pred cEEEE-ecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCc--cccCCCCCCCCCCCeEEEEecCCCCCCCCCCccccCCC
Q 011765 7 LQIAM-FPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRN--IDRLPRLPQNLASMIQFVKISLPHVDNLRENAEATIDL 83 (478)
Q Consensus 7 ~~il~-~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~--~~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~~~~~ 83 (478)
|||.+ +..|. |+.-+..++++|.++||+|.+.+-+.. .+.+...| +++..+. .. .
T Consensus 1 MkIwiDi~~p~--hvhfFk~~I~eL~~~GheV~it~R~~~~~~~LL~~yg------~~y~~iG----~~-g--------- 58 (335)
T PF04007_consen 1 MKIWIDITHPA--HVHFFKNIIRELEKRGHEVLITARDKDETEELLDLYG------IDYIVIG----KH-G--------- 58 (335)
T ss_pred CeEEEECCCch--HHHHHHHHHHHHHhCCCEEEEEEeccchHHHHHHHcC------CCeEEEc----CC-C---------
Confidence 67776 45555 899999999999999999999886543 23444555 7777775 11 0
Q ss_pred ChhHHHHHHHHHhhhhHHHHHHHhhcCCCEEEEcCCcccHHHHHHHhCCCeEEEecchHHHHHhhccccccccccCCCCC
Q 011765 84 PYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAAYWLPARARELGIPSGFFSIFTAATLGYFGPSSVLINDSGDHLK 163 (478)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (478)
.+....+...... .-.+.+++++.+||++|+- ..+.+..+|.-+|+|+|.+.-+.......
T Consensus 59 -~~~~~Kl~~~~~R-~~~l~~~~~~~~pDv~is~-~s~~a~~va~~lgiP~I~f~D~e~a~~~~---------------- 119 (335)
T PF04007_consen 59 -DSLYGKLLESIER-QYKLLKLIKKFKPDVAISF-GSPEAARVAFGLGIPSIVFNDTEHAIAQN---------------- 119 (335)
T ss_pred -CCHHHHHHHHHHH-HHHHHHHHHhhCCCEEEec-CcHHHHHHHHHhCCCeEEEecCchhhccc----------------
Confidence 1111122222222 2356677788899999975 45667889999999999996643322110
Q ss_pred CCCcccCCCcccccccccccchhhhhhhhhhhcCCcccchhhhhhhccccCCcEEEEcCcCccChHHHHHHHhhcCCCee
Q 011765 164 TPEDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLHRKPVI 243 (478)
Q Consensus 164 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~~~~~~~~~~ 243 (478)
-..+|+...+.... ..+. ....++. .+....-++.+.| ..
T Consensus 120 --------~Lt~Pla~~i~~P~-~~~~------------~~~~~~G---~~~~i~~y~G~~E----------------~a 159 (335)
T PF04007_consen 120 --------RLTLPLADVIITPE-AIPK------------EFLKRFG---AKNQIRTYNGYKE----------------LA 159 (335)
T ss_pred --------eeehhcCCeeECCc-ccCH------------HHHHhcC---CcCCEEEECCeee----------------EE
Confidence 00111111000000 0000 0000000 0001111333222 11
Q ss_pred eeccCCCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccC----CCHHHHHHHHHHHHhCCCCEEEEEecCCCC
Q 011765 244 PVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAK----PSQEELTEIALGLELSKLPFFWVLKKRLGQ 319 (478)
Q Consensus 244 ~vGp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~----~~~~~~~~~~~al~~~~~~~i~~~~~~~~~ 319 (478)
++-| ..+++++.+-+.. ++++.|++=+-+... .....+.++++.|++.+..++..-+..
T Consensus 160 yl~~-------------F~Pd~~vl~~lg~-~~~~yIvvR~~~~~A~y~~~~~~i~~~ii~~L~~~~~~vV~ipr~~--- 222 (335)
T PF04007_consen 160 YLHP-------------FKPDPEVLKELGL-DDEPYIVVRPEAWKASYDNGKKSILPEIIEELEKYGRNVVIIPRYE--- 222 (335)
T ss_pred eecC-------------CCCChhHHHHcCC-CCCCEEEEEeccccCeeecCccchHHHHHHHHHhhCceEEEecCCc---
Confidence 1111 1123334444442 244577766655322 223556778888888877644333221
Q ss_pred CCCCCCCCChhhhhhcCCCcEEE-eccCChhhhhcCCCceeeeeccChhhHHHHHHhCCcEeccccccchhhHHHHHhhc
Q 011765 320 ADTEPIELPDGFEERTRGRGVVY-TSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEK 398 (478)
Q Consensus 320 ~~~~~~~~p~~~~~~~~~~n~~~-~~~vpq~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~ 398 (478)
..++ ..++. ++.+ ..-++..++|.++++ +|+-|| ....||...|+|.|.+ +-++-...-+.+.+.
T Consensus 223 ------~~~~-~~~~~---~~~i~~~~vd~~~Ll~~a~l--~Ig~gg-TMa~EAA~LGtPaIs~-~~g~~~~vd~~L~~~ 288 (335)
T PF04007_consen 223 ------DQRE-LFEKY---GVIIPPEPVDGLDLLYYADL--VIGGGG-TMAREAALLGTPAISC-FPGKLLAVDKYLIEK 288 (335)
T ss_pred ------chhh-HHhcc---CccccCCCCCHHHHHHhcCE--EEeCCc-HHHHHHHHhCCCEEEe-cCCcchhHHHHHHHC
Confidence 1111 11111 2222 234455689999999 999887 7789999999999974 222333344556777
Q ss_pred CeEEEeeccCCCCcccHHHHHHHHHHHhc
Q 011765 399 QIVELIPRDEGDGFFTRNSVAESLRLVLV 427 (478)
Q Consensus 399 g~G~~l~~~~~~~~~~~~~l~~~i~~ll~ 427 (478)
|+ .... -+.+++.+.|.+.+.
T Consensus 289 Gl--l~~~------~~~~ei~~~v~~~~~ 309 (335)
T PF04007_consen 289 GL--LYHS------TDPDEIVEYVRKNLG 309 (335)
T ss_pred CC--eEec------CCHHHHHHHHHHhhh
Confidence 75 2222 267777776655554
|
They are found in archaea and some bacteria and have no known function. |
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.28 E-value=8.8e-09 Score=102.66 Aligned_cols=89 Identities=15% Similarity=0.196 Sum_probs=66.0
Q ss_pred CCcEEEeccCChhh---hhcCCCceeeeec---cC-hhhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeeccCC
Q 011765 337 GRGVVYTSWAPQLA---ILAHDSVGGFLTH---AG-WSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEG 409 (478)
Q Consensus 337 ~~n~~~~~~vpq~~---vL~~~~~~~~ItH---gG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~ 409 (478)
.+++.+..|+|+.+ ++..+++ +|+. -| -.++.||+++|+|+|+.... .....+++.+.|...+..
T Consensus 282 ~~~v~~~g~~~~~~~~~~~~~adi--~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~----~~~e~i~~~~~g~~~~~~-- 353 (398)
T cd03800 282 IDRVDFPGRVSREDLPALYRAADV--FVNPALYEPFGLTALEAMACGLPVVATAVG----GPRDIVVDGVTGLLVDPR-- 353 (398)
T ss_pred CceEEEeccCCHHHHHHHHHhCCE--EEecccccccCcHHHHHHhcCCCEEECCCC----CHHHHccCCCCeEEeCCC--
Confidence 35788999999865 4777887 7643 22 36899999999999986543 455567666789887653
Q ss_pred CCcccHHHHHHHHHHHhcccchHHHHHHHHH
Q 011765 410 DGFFTRNSVAESLRLVLVEEKGQIYRDKAKE 440 (478)
Q Consensus 410 ~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~ 440 (478)
+.++++++|.++++ +++.++++.+
T Consensus 354 ----~~~~l~~~i~~l~~---~~~~~~~~~~ 377 (398)
T cd03800 354 ----DPEALAAALRRLLT---DPALRRRLSR 377 (398)
T ss_pred ----CHHHHHHHHHHHHh---CHHHHHHHHH
Confidence 78999999999999 6655544443
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. |
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.27 E-value=2.3e-08 Score=100.17 Aligned_cols=91 Identities=18% Similarity=0.175 Sum_probs=63.0
Q ss_pred CcEEEe-ccCChhh---hhcCCCceeeee-c-----cC-hhhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeec
Q 011765 338 RGVVYT-SWAPQLA---ILAHDSVGGFLT-H-----AG-WSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPR 406 (478)
Q Consensus 338 ~n~~~~-~~vpq~~---vL~~~~~~~~It-H-----gG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~ 406 (478)
+++.+. .|+|..+ +|+.+++ +|. + -| -+++.||+++|+|+|+... ......+++.+.|...
T Consensus 294 ~~~~~~~g~~~~~~~~~~l~~aDv--~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~----~~~~eiv~~~~~G~lv-- 365 (415)
T cd03816 294 KKVTIRTPWLSAEDYPKLLASADL--GVSLHTSSSGLDLPMKVVDMFGCGLPVCALDF----KCIDELVKHGENGLVF-- 365 (415)
T ss_pred CcEEEEcCcCCHHHHHHHHHhCCE--EEEccccccccCCcHHHHHHHHcCCCEEEeCC----CCHHHHhcCCCCEEEE--
Confidence 455544 5887644 5777888 663 1 12 3579999999999999543 3566677777788876
Q ss_pred cCCCCcccHHHHHHHHHHHhcccch---HHHHHHHHHHHHHh
Q 011765 407 DEGDGFFTRNSVAESLRLVLVEEKG---QIYRDKAKEMKGLF 445 (478)
Q Consensus 407 ~~~~~~~~~~~l~~~i~~ll~~~~~---~~~~~~a~~~~~~~ 445 (478)
. +.++|+++|.++++ | ++.++++.+-++..
T Consensus 366 -~-----d~~~la~~i~~ll~---~~~~~~~~~~m~~~~~~~ 398 (415)
T cd03816 366 -G-----DSEELAEQLIDLLS---NFPNRGKLNSLKKGAQEE 398 (415)
T ss_pred -C-----CHHHHHHHHHHHHh---cCCCHHHHHHHHHHHHHh
Confidence 2 67999999999999 6 55555554444443
|
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. |
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.26 E-value=8.8e-09 Score=99.83 Aligned_cols=320 Identities=17% Similarity=0.120 Sum_probs=163.7
Q ss_pred EEEEecCC-C--ccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCCCCCCCCccccCCCC
Q 011765 8 QIAMFPWL-A--FGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVDNLRENAEATIDLP 84 (478)
Q Consensus 8 ~il~~~~~-~--~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~~~~~~ 84 (478)
||++++.. . .|...-+..++++|.++||+|++++.......... ...++.+..++. . ...
T Consensus 1 kI~i~~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~----~~~~~~~~~~~~----~-~~~-------- 63 (348)
T cd03820 1 KILFVIPSLGNAGGAERVLSNLANALAEKGHEVTIISLDKGEPPFYE----LDPKIKVIDLGD----K-RDS-------- 63 (348)
T ss_pred CeEEEeccccCCCChHHHHHHHHHHHHhCCCeEEEEecCCCCCCccc----cCCccceeeccc----c-ccc--------
Confidence 35554333 3 35556678899999999999999998765411111 112344444431 0 000
Q ss_pred hhHHHHHHHHHhhhhHHHHHHHhhcCCCEEEEcCCcccHHHHHHHhCC-CeEEEecchHHHHHhhccccccccccCCCCC
Q 011765 85 YDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAAYWLPARARELGI-PSGFFSIFTAATLGYFGPSSVLINDSGDHLK 163 (478)
Q Consensus 85 ~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~~~~~~~A~~lgI-P~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (478)
. ..........+..+++..+||+|+...........+...+. |++.........
T Consensus 64 -----~-~~~~~~~~~~~~~~l~~~~~d~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------------------- 118 (348)
T cd03820 64 -----K-LLARFKKLRRLRKLLKNNKPDVVISFLTSLLTFLASLGLKIVKLIVSEHNSPDA------------------- 118 (348)
T ss_pred -----c-hhccccchHHHHHhhcccCCCEEEEcCchHHHHHHHHhhccccEEEecCCCccc-------------------
Confidence 0 00001122356667777899999998655334444555555 666542211000
Q ss_pred CCCcccCCCcccccccccccchhhhhhhhhhhcCCcccchhhhhhhccccCCcEEEEcCcCccChHHHHHHHhhcCCCee
Q 011765 164 TPEDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLHRKPVI 243 (478)
Q Consensus 164 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~~~~~~~~~~ 243 (478)
. .. ... . ........+.+|.++..+.... .......+.++.
T Consensus 119 ----------~-~~----~~~------~-------------~~~~~~~~~~~d~ii~~s~~~~-----~~~~~~~~~~~~ 159 (348)
T cd03820 119 ----------Y-KK----RLR------R-------------LLLRRLLYRRADAVVVLTEEDR-----ALYYKKFNKNVV 159 (348)
T ss_pred ----------h-hh----hhH------H-------------HHHHHHHHhcCCEEEEeCHHHH-----HHhhccCCCCeE
Confidence 0 00 000 0 0011223456677777663321 111222234555
Q ss_pred eeccCCCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccC-CCHHHHHHHHHHHHhCC--CCEEEEEecCCCCC
Q 011765 244 PVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAK-PSQEELTEIALGLELSK--LPFFWVLKKRLGQA 320 (478)
Q Consensus 244 ~vGp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~-~~~~~~~~~~~al~~~~--~~~i~~~~~~~~~~ 320 (478)
.+++....... . ....+++.+++..|+... ...+.+.+.++.+.+.. .+++++-.+.
T Consensus 160 vi~~~~~~~~~------~----------~~~~~~~~~i~~~g~~~~~K~~~~l~~~~~~l~~~~~~~~l~i~G~~~---- 219 (348)
T cd03820 160 VIPNPLPFPPE------E----------PSSDLKSKRILAVGRLVPQKGFDLLIEAWAKIAKKHPDWKLRIVGDGP---- 219 (348)
T ss_pred EecCCcChhhc------c----------ccCCCCCcEEEEEEeeccccCHHHHHHHHHHHHhcCCCeEEEEEeCCC----
Confidence 56533321110 0 001223356667777654 23344555555554323 3333332211
Q ss_pred CCCCCCCChhhhhhc-CCCcEEEeccCCh-hhhhcCCCceeeeecc---C-hhhHHHHHHhCCcEeccccccchhhHHHH
Q 011765 321 DTEPIELPDGFEERT-RGRGVVYTSWAPQ-LAILAHDSVGGFLTHA---G-WSSVVEALQFGMPLIVLTCYADQGLNAKL 394 (478)
Q Consensus 321 ~~~~~~~p~~~~~~~-~~~n~~~~~~vpq-~~vL~~~~~~~~ItHg---G-~~s~~eal~~GvP~l~~P~~~DQ~~na~~ 394 (478)
....+.. ...+. ...++.+..+... ..++..+++ +|.-. | -+++.||+++|+|+|+.+....+ ..
T Consensus 220 --~~~~~~~-~~~~~~~~~~v~~~g~~~~~~~~~~~ad~--~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~----~~ 290 (348)
T cd03820 220 --EREALEA-LIKELGLEDRVILLGFTKNIEEYYAKASI--FVLTSRFEGFPMVLLEAMAFGLPVISFDCPTGP----SE 290 (348)
T ss_pred --CHHHHHH-HHHHcCCCCeEEEcCCcchHHHHHHhCCE--EEeCccccccCHHHHHHHHcCCCEEEecCCCch----Hh
Confidence 1111111 11111 1346666666333 557777887 66443 2 47899999999999986544332 33
Q ss_pred HhhcC-eEEEeeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhc
Q 011765 395 LEEKQ-IVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFG 446 (478)
Q Consensus 395 v~~~g-~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~ 446 (478)
+.+.+ .|...+.. +.+++.++|.++++ |++.++++.+-+....
T Consensus 291 ~~~~~~~g~~~~~~------~~~~~~~~i~~ll~---~~~~~~~~~~~~~~~~ 334 (348)
T cd03820 291 IIEDGVNGLLVPNG------DVEALAEALLRLME---DEELRKRMGANARESA 334 (348)
T ss_pred hhccCcceEEeCCC------CHHHHHHHHHHHHc---CHHHHHHHHHHHHHHH
Confidence 44454 78877653 78999999999999 7777766665554433
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. |
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.25 E-value=1.9e-08 Score=98.49 Aligned_cols=347 Identities=16% Similarity=0.095 Sum_probs=176.9
Q ss_pred CccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCCCCCCCCccccCCCChhHHHHHHHHH
Q 011765 16 AFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVDNLRENAEATIDLPYDEVKYLKQSF 95 (478)
Q Consensus 16 ~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 95 (478)
..|+-..+..+++.|.+.||+|++++............ ........ ........... .......
T Consensus 13 ~~g~~~~~~~~~~~l~~~g~~v~v~~~~~~~~~~~~~~----~~~~~~~~------~~~~~~~~~~~------~~~~~~~ 76 (377)
T cd03798 13 NGGGGIFVKELARALAKRGVEVTVLAPGPWGPKLLDLL----KGRLVGVE------RLPVLLPVVPL------LKGPLLY 76 (377)
T ss_pred CchHHHHHHHHHHHHHHCCCceEEEecCCCCCCchhhc----cccccccc------ccccCcchhhc------cccchhH
Confidence 36888999999999999999999999876554332211 00000000 00000000000 0001111
Q ss_pred hhhhHHHHHHHh--hcCCCEEEEcCCccc---HHHHHHHhCCCeEEEecchHHHHHhhccccccccccCCCCCCCCcccC
Q 011765 96 DCLEEPMAKLLQ--SLAPDWLLFDFAAYW---LPARARELGIPSGFFSIFTAATLGYFGPSSVLINDSGDHLKTPEDYTR 170 (478)
Q Consensus 96 ~~~~~~l~~ll~--~~~pD~vI~D~~~~~---~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (478)
......+..+++ ..+||+|+.....+. +..++...++|++..........
T Consensus 77 ~~~~~~~~~~l~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~------------------------- 131 (377)
T cd03798 77 LLAARALLKLLKLKRFRPDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNL------------------------- 131 (377)
T ss_pred HHHHHHHHHHHhcccCCCCEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcc-------------------------
Confidence 223345666666 889999998854432 34566777889887644211100
Q ss_pred CCcccccccccccchhhhhhhhhhhcCCcccchhhhhhhccccCCcEEEEcCcCccChHHHHHHHhh--cCCCeeeeccC
Q 011765 171 VPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQL--HRKPVIPVGQL 248 (478)
Q Consensus 171 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~~~~--~~~~~~~vGp~ 248 (478)
.... . + ...........++.+++.+ ....+..... ...++..++..
T Consensus 132 ---~~~~-----~-------~------------~~~~~~~~~~~~d~ii~~s-----~~~~~~~~~~~~~~~~~~~i~~~ 179 (377)
T cd03798 132 ---LPRK-----R-------L------------LRALLRRALRRADAVIAVS-----EALADELKALGIDPEKVTVIPNG 179 (377)
T ss_pred ---cCch-----h-------h------------HHHHHHHHHhcCCeEEeCC-----HHHHHHHHHhcCCCCceEEcCCC
Confidence 0000 0 0 0001112244667777766 3333333333 23345666533
Q ss_pred CCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccC-CCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCCCC
Q 011765 249 PTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAK-PSQEELTEIALGLELSKLPFFWVLKKRLGQADTEPIEL 327 (478)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~ 327 (478)
.....-. ....... ..+.. .+++.+++..|+... ...+.+...++.+...+..+.+.+.+... ....+
T Consensus 180 ~~~~~~~-----~~~~~~~-~~~~~-~~~~~~i~~~g~~~~~k~~~~li~~~~~~~~~~~~~~l~i~g~~~----~~~~~ 248 (377)
T cd03798 180 VDTERFS-----PADRAEA-RKLGL-PEDKKVILFVGRLVPRKGIDYLIEALARLLKKRPDVHLVIVGDGP----LREAL 248 (377)
T ss_pred cCcccCC-----CcchHHH-HhccC-CCCceEEEEeccCccccCHHHHHHHHHHHHhcCCCeEEEEEcCCc----chHHH
Confidence 3221110 0001000 11111 223467777887664 22344444444444433344444433211 00000
Q ss_pred Chhhhhhc-CCCcEEEeccCChh---hhhcCCCceeee----eccChhhHHHHHHhCCcEeccccccchhhHHHHHhhcC
Q 011765 328 PDGFEERT-RGRGVVYTSWAPQL---AILAHDSVGGFL----THAGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQ 399 (478)
Q Consensus 328 p~~~~~~~-~~~n~~~~~~vpq~---~vL~~~~~~~~I----tHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g 399 (478)
- ...++. ..+++.+..++++. .++..+++ +| +-|..+++.||+++|+|+|+.+. ......+.+.+
T Consensus 249 ~-~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~----~~~~~~~~~~~ 321 (377)
T cd03798 249 E-ALAAELGLEDRVTFLGAVPHEEVPAYYAAADV--FVLPSLREGFGLVLLEAMACGLPVVATDV----GGIPEIITDGE 321 (377)
T ss_pred H-HHHHhcCCcceEEEeCCCCHHHHHHHHHhcCe--eecchhhccCChHHHHHHhcCCCEEEecC----CChHHHhcCCc
Confidence 0 111111 24588888999875 45677777 55 22445789999999999998654 34555667777
Q ss_pred eEEEeeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhcccCChHHHHHHHHHHHH
Q 011765 400 IVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLK 463 (478)
Q Consensus 400 ~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~~ 463 (478)
.|...+.. +.+++.+++.++++ ++.. +..++..+...+.-..+..++.+.+.++
T Consensus 322 ~g~~~~~~------~~~~l~~~i~~~~~---~~~~-~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 375 (377)
T cd03798 322 NGLLVPPG------DPEALAEAILRLLA---DPWL-RLGRAARRRVAERFSWENVAERLLELYR 375 (377)
T ss_pred ceeEECCC------CHHHHHHHHHHHhc---CcHH-HHhHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 77777653 88999999999999 5553 2333333333333333445555555554
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. |
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.23 E-value=7.4e-09 Score=101.50 Aligned_cols=142 Identities=17% Similarity=0.154 Sum_probs=89.0
Q ss_pred ceEEEEeCcccCCCHHHHHHHHHHHHhCC-CCEEEEEecCCCCCCCCCCCCChhhhh---hc-CCCcEEEeccCChhh--
Q 011765 278 SVVYVAFGSEAKPSQEELTEIALGLELSK-LPFFWVLKKRLGQADTEPIELPDGFEE---RT-RGRGVVYTSWAPQLA-- 350 (478)
Q Consensus 278 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~~-~~~i~~~~~~~~~~~~~~~~~p~~~~~---~~-~~~n~~~~~~vpq~~-- 350 (478)
..+++..|+.. ....+..+++++++.. .+++++-.+. ..+.+.+ +. ..+|+.+..|+|+.+
T Consensus 191 ~~~i~~~G~~~--~~K~~~~li~a~~~l~~~~l~i~G~g~----------~~~~~~~~~~~~~~~~~V~~~g~v~~~~~~ 258 (357)
T cd03795 191 RPFFLFVGRLV--YYKGLDVLLEAAAALPDAPLVIVGEGP----------LEAELEALAAALGLLDRVRFLGRLDDEEKA 258 (357)
T ss_pred CcEEEEecccc--cccCHHHHHHHHHhccCcEEEEEeCCh----------hHHHHHHHHHhcCCcceEEEcCCCCHHHHH
Confidence 46677788765 3344555667776665 4444432211 1111221 11 246899999999854
Q ss_pred -hhcCCCceeeee---ccCh-hhHHHHHHhCCcEeccccccchhhHHHHHhh-cCeEEEeeccCCCCcccHHHHHHHHHH
Q 011765 351 -ILAHDSVGGFLT---HAGW-SSVVEALQFGMPLIVLTCYADQGLNAKLLEE-KQIVELIPRDEGDGFFTRNSVAESLRL 424 (478)
Q Consensus 351 -vL~~~~~~~~It---HgG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~-~g~G~~l~~~~~~~~~~~~~l~~~i~~ 424 (478)
++..+++.++.+ +.|. .++.||+++|+|+|+....... ..+.+ .+.|...+.. +.++++++|.+
T Consensus 259 ~~~~~ad~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~----~~i~~~~~~g~~~~~~------d~~~~~~~i~~ 328 (357)
T cd03795 259 ALLAACDVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGG----SYVNLHGVTGLVVPPG------DPAALAEAIRR 328 (357)
T ss_pred HHHHhCCEEEeCCcccccccchHHHHHHHcCCCEEecCCCCch----hHHhhCCCceEEeCCC------CHHHHHHHHHH
Confidence 666788833333 2343 4799999999999996544443 33443 5778777653 79999999999
Q ss_pred HhcccchHHHHHHHHHHHHH
Q 011765 425 VLVEEKGQIYRDKAKEMKGL 444 (478)
Q Consensus 425 ll~~~~~~~~~~~a~~~~~~ 444 (478)
+++ |++.++++.+-+..
T Consensus 329 l~~---~~~~~~~~~~~~~~ 345 (357)
T cd03795 329 LLE---DPELRERLGEAARE 345 (357)
T ss_pred HHH---CHHHHHHHHHHHHH
Confidence 999 77665555544433
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.22 E-value=6.5e-09 Score=104.75 Aligned_cols=99 Identities=15% Similarity=0.094 Sum_probs=68.3
Q ss_pred hhhhcCCCceeeeec-----cChhhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeeccCCCCcccHHHHHHHHH
Q 011765 349 LAILAHDSVGGFLTH-----AGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLR 423 (478)
Q Consensus 349 ~~vL~~~~~~~~ItH-----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~~~~~~~~~l~~~i~ 423 (478)
..+++.+++ ++.. +|..++.||+++|+|+|+-|...++......+.+.|+++.. -+.++|+++|.
T Consensus 314 ~~~y~~aDi--~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~~g~~~~~--------~d~~~La~~l~ 383 (425)
T PRK05749 314 GLLYAIADI--AFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERLLQAGAAIQV--------EDAEDLAKAVT 383 (425)
T ss_pred HHHHHhCCE--EEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHHHHCCCeEEE--------CCHHHHHHHHH
Confidence 456677776 4331 33345999999999999999988888888888777766652 27899999999
Q ss_pred HHhcccchHHHHHHHHHHHHHhc--ccCChHHHHHHHHH
Q 011765 424 LVLVEEKGQIYRDKAKEMKGLFG--DKGRHDRYVDNFLN 460 (478)
Q Consensus 424 ~ll~~~~~~~~~~~a~~~~~~~~--~~~~~~~~~~~i~~ 460 (478)
++++ |++.++++.+-+.... ..+...+.++.+.+
T Consensus 384 ~ll~---~~~~~~~m~~~a~~~~~~~~~~~~~~~~~l~~ 419 (425)
T PRK05749 384 YLLT---DPDARQAYGEAGVAFLKQNQGALQRTLQLLEP 419 (425)
T ss_pred HHhc---CHHHHHHHHHHHHHHHHhCccHHHHHHHHHHH
Confidence 9999 7776666555544433 23433444444443
|
|
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.22 E-value=1e-07 Score=95.37 Aligned_cols=112 Identities=13% Similarity=0.104 Sum_probs=77.0
Q ss_pred CcEEEeccCChh---hhhcCCCceeeee---ccCh-hhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeeccCCC
Q 011765 338 RGVVYTSWAPQL---AILAHDSVGGFLT---HAGW-SSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGD 410 (478)
Q Consensus 338 ~n~~~~~~vpq~---~vL~~~~~~~~It---HgG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~~ 410 (478)
+++.+..+++.. ++++.+++ +|. +-|. .++.||+++|+|+|+... ......+.+.+.|...+..
T Consensus 283 ~~v~~~g~~~~~~~~~~l~~ad~--~v~ps~~E~~g~~~lEAma~G~Pvi~~~~----~~~~e~i~~~~~g~~~~~~--- 353 (405)
T TIGR03449 283 DRVRFLPPRPPEELVHVYRAADV--VAVPSYNESFGLVAMEAQACGTPVVAARV----GGLPVAVADGETGLLVDGH--- 353 (405)
T ss_pred ceEEECCCCCHHHHHHHHHhCCE--EEECCCCCCcChHHHHHHHcCCCEEEecC----CCcHhhhccCCceEECCCC---
Confidence 578888999874 46788887 662 2333 589999999999999654 3344556666778877653
Q ss_pred CcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHh
Q 011765 411 GFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLKN 464 (478)
Q Consensus 411 ~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~ 464 (478)
+.++++++|.++++ +++.++++..-+....+.-.-+..++.+++.+.+
T Consensus 354 ---d~~~la~~i~~~l~---~~~~~~~~~~~~~~~~~~fsw~~~~~~~~~~y~~ 401 (405)
T TIGR03449 354 ---DPADWADALARLLD---DPRTRIRMGAAAVEHAAGFSWAATADGLLSSYRD 401 (405)
T ss_pred ---CHHHHHHHHHHHHh---CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 78999999999999 6666555544444333333345566666666654
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. |
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.9e-08 Score=98.86 Aligned_cols=112 Identities=15% Similarity=0.155 Sum_probs=73.6
Q ss_pred CcEEEeccCC-hh---hhhcCCCceeeeecc----ChhhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeeccCC
Q 011765 338 RGVVYTSWAP-QL---AILAHDSVGGFLTHA----GWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEG 409 (478)
Q Consensus 338 ~n~~~~~~vp-q~---~vL~~~~~~~~ItHg----G~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~ 409 (478)
.++.+..|++ +. .+++.+++ +|.-. ..+++.||+++|+|+|+.... .....+.+.+.|..++..
T Consensus 244 ~~v~~~g~~~~~~~~~~~~~~ad~--~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~----~~~e~~~~~~~g~~~~~~-- 315 (365)
T cd03825 244 FPVHYLGSLNDDESLALIYSAADV--FVVPSLQENFPNTAIEALACGTPVVAFDVG----GIPDIVDHGVTGYLAKPG-- 315 (365)
T ss_pred CceEecCCcCCHHHHHHHHHhCCE--EEeccccccccHHHHHHHhcCCCEEEecCC----CChhheeCCCceEEeCCC--
Confidence 3677888998 43 46777887 77642 347999999999999986542 333344444567766653
Q ss_pred CCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhc-ccCChHHHHHHHHHHHHh
Q 011765 410 DGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFG-DKGRHDRYVDNFLNYLKN 464 (478)
Q Consensus 410 ~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~i~~~~~~ 464 (478)
+.+++.+++.++++ +++.++++.+-+.... +.-+.+..++.+++.+++
T Consensus 316 ----~~~~~~~~l~~l~~---~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~~ 364 (365)
T cd03825 316 ----DPEDLAEGIEWLLA---DPDEREELGEAARELAENEFDSRVQAKRYLSLYEE 364 (365)
T ss_pred ----CHHHHHHHHHHHHh---CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 78999999999998 6664444444333332 333445666766666543
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. |
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.17 E-value=5.4e-08 Score=95.49 Aligned_cols=110 Identities=16% Similarity=0.275 Sum_probs=71.9
Q ss_pred CCcEEEec-cCChh---hhhcCCCceeee--ec----cChhhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeec
Q 011765 337 GRGVVYTS-WAPQL---AILAHDSVGGFL--TH----AGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPR 406 (478)
Q Consensus 337 ~~n~~~~~-~vpq~---~vL~~~~~~~~I--tH----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~ 406 (478)
..++.+.. |+|+. .++..+++ +| ++ |..+++.||+++|+|+|+.+..+ ...+.+.+.|...+.
T Consensus 246 ~~~v~~~~~~~~~~~~~~~~~~ad~--~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-----~~~i~~~~~g~~~~~ 318 (366)
T cd03822 246 ADRVIFINRYLPDEELPELFSAADV--VVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-----AEEVLDGGTGLLVPP 318 (366)
T ss_pred CCcEEEecCcCCHHHHHHHHhhcCE--EEecccccccccchHHHHHHHcCCCEEecCCCC-----hheeeeCCCcEEEcC
Confidence 34676664 48864 46677777 55 22 33468999999999999977543 334555677777765
Q ss_pred cCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhcccCChHHHHHHHHHHH
Q 011765 407 DEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYL 462 (478)
Q Consensus 407 ~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~ 462 (478)
. +.+++.+++.++++ +++.++++.+-+....+.-.-+..++.+.+.+
T Consensus 319 ~------d~~~~~~~l~~l~~---~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 365 (366)
T cd03822 319 G------DPAALAEAIRRLLA---DPELAQALRARAREYARAMSWERVAERYLRLL 365 (366)
T ss_pred C------CHHHHHHHHHHHHc---ChHHHHHHHHHHHHHHhhCCHHHHHHHHHHHh
Confidence 3 78999999999999 65555555444444443344455555555543
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. |
| >cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) | Back alignment and domain information |
|---|
Probab=99.16 E-value=6.1e-10 Score=109.75 Aligned_cols=142 Identities=15% Similarity=0.091 Sum_probs=88.1
Q ss_pred CCceEEEEeCcccCC-CHHHHHHHHHHHHhCCC-CEEEEEecCCCCCCCCCCCCChhhhhhcC--CCcEEEeccCChh--
Q 011765 276 KGSVVYVAFGSEAKP-SQEELTEIALGLELSKL-PFFWVLKKRLGQADTEPIELPDGFEERTR--GRGVVYTSWAPQL-- 349 (478)
Q Consensus 276 ~~~~v~vs~Gs~~~~-~~~~~~~~~~al~~~~~-~~i~~~~~~~~~~~~~~~~~p~~~~~~~~--~~n~~~~~~vpq~-- 349 (478)
+++.|++++|..... ....+..++++++.... ++.+++..... ....+-+ ...+.. .+++.+..+.+..
T Consensus 197 ~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~~~~vi~~~~~~----~~~~l~~-~~~~~~~~~~~v~~~~~~~~~~~ 271 (363)
T cd03786 197 PKKYILVTLHRVENVDDGEQLEEILEALAELAEEDVPVVFPNHPR----TRPRIRE-AGLEFLGHHPNVLLISPLGYLYF 271 (363)
T ss_pred CCCEEEEEeCCccccCChHHHHHHHHHHHHHHhcCCEEEEECCCC----hHHHHHH-HHHhhccCCCCEEEECCcCHHHH
Confidence 355788888876643 35667778888866533 24444432211 0111111 111111 3577776665543
Q ss_pred -hhhcCCCceeeeeccChhhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeeccCCCCcccHHHHHHHHHHHhcc
Q 011765 350 -AILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLVE 428 (478)
Q Consensus 350 -~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~ 428 (478)
.++..+++ ||+..| |.+.||+++|+|+|+++.. |. +..+.+.|++..+. + +.++|.++|.++++
T Consensus 272 ~~l~~~ad~--~v~~Sg-gi~~Ea~~~g~PvI~~~~~--~~--~~~~~~~g~~~~~~--~-----~~~~i~~~i~~ll~- 336 (363)
T cd03786 272 LLLLKNADL--VLTDSG-GIQEEASFLGVPVLNLRDR--TE--RPETVESGTNVLVG--T-----DPEAILAAIEKLLS- 336 (363)
T ss_pred HHHHHcCcE--EEEcCc-cHHhhhhhcCCCEEeeCCC--Cc--cchhhheeeEEecC--C-----CHHHHHHHHHHHhc-
Confidence 45666777 999998 7788999999999998743 22 33455567665553 2 67899999999999
Q ss_pred cchHHHHHHHH
Q 011765 429 EKGQIYRDKAK 439 (478)
Q Consensus 429 ~~~~~~~~~a~ 439 (478)
++..+++++
T Consensus 337 --~~~~~~~~~ 345 (363)
T cd03786 337 --DEFAYSLMS 345 (363)
T ss_pred --CchhhhcCC
Confidence 666555553
|
The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st |
| >TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.8e-09 Score=106.57 Aligned_cols=157 Identities=15% Similarity=0.207 Sum_probs=92.9
Q ss_pred CceEEEEeCcccCCCHHHHHHHHHHHHhC-----CCCEEEEEecCCCCCCCCCCCCChhhhhhc-CCCcEEEeccCChh-
Q 011765 277 GSVVYVAFGSEAKPSQEELTEIALGLELS-----KLPFFWVLKKRLGQADTEPIELPDGFEERT-RGRGVVYTSWAPQL- 349 (478)
Q Consensus 277 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~-~~~n~~~~~~vpq~- 349 (478)
++.++++++-.... ...+..+++++.++ +.++++...++. ..-..+.+.. ..+++.+.+.+++.
T Consensus 197 ~~~vl~~~hr~~~~-~k~~~~ll~a~~~l~~~~~~~~~vi~~~~~~--------~~~~~~~~~~~~~~~v~~~~~~~~~~ 267 (365)
T TIGR00236 197 KRYILLTLHRRENV-GEPLENIFKAIREIVEEFEDVQIVYPVHLNP--------VVREPLHKHLGDSKRVHLIEPLEYLD 267 (365)
T ss_pred CCEEEEecCchhhh-hhHHHHHHHHHHHHHHHCCCCEEEEECCCCh--------HHHHHHHHHhCCCCCEEEECCCChHH
Confidence 34666665433221 13466677766543 345555433211 1111111111 23478887776654
Q ss_pred --hhhcCCCceeeeeccChhhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeeccCCCCcccHHHHHHHHHHHhc
Q 011765 350 --AILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLV 427 (478)
Q Consensus 350 --~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~ 427 (478)
.++..+++ +|+-.|.. +.||+++|+|+|.++...+++. +.+.|.+..+. -++++|.+++.++++
T Consensus 268 ~~~~l~~ad~--vv~~Sg~~-~~EA~a~g~PvI~~~~~~~~~e----~~~~g~~~lv~-------~d~~~i~~ai~~ll~ 333 (365)
T TIGR00236 268 FLNLAANSHL--ILTDSGGV-QEEAPSLGKPVLVLRDTTERPE----TVEAGTNKLVG-------TDKENITKAAKRLLT 333 (365)
T ss_pred HHHHHHhCCE--EEECChhH-HHHHHHcCCCEEECCCCCCChH----HHhcCceEEeC-------CCHHHHHHHHHHHHh
Confidence 45666776 99877644 7999999999999876555542 33467776552 278999999999999
Q ss_pred ccchHHHHHHHHHHHHHhcccCChHHHHHHHH
Q 011765 428 EEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFL 459 (478)
Q Consensus 428 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~ 459 (478)
+++.++++..-...+.+++.+.+.++.+.
T Consensus 334 ---~~~~~~~~~~~~~~~g~~~a~~ri~~~l~ 362 (365)
T TIGR00236 334 ---DPDEYKKMSNASNPYGDGEASERIVEELL 362 (365)
T ss_pred ---ChHHHHHhhhcCCCCcCchHHHHHHHHHH
Confidence 77777776554444444443344444433
|
Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other. |
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.15 E-value=6.5e-08 Score=94.81 Aligned_cols=148 Identities=17% Similarity=0.125 Sum_probs=84.5
Q ss_pred CceEEEEeCcccC-CCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCCCCChhhh---hhcC-CCcEEEeccCCh-hh
Q 011765 277 GSVVYVAFGSEAK-PSQEELTEIALGLELSKLPFFWVLKKRLGQADTEPIELPDGFE---ERTR-GRGVVYTSWAPQ-LA 350 (478)
Q Consensus 277 ~~~v~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~---~~~~-~~n~~~~~~vpq-~~ 350 (478)
+..+++..|+... ...+.+.+.+..+...+..+.+.+-+... ........+. ++.. .+++.+..|.+. ..
T Consensus 184 ~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~~~~~~l~ivG~~~----~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~ 259 (355)
T cd03819 184 GKPVILLPGRLTRWKGQEVFIEALARLKKDDPDVHLLIVGDAQ----GRRFYYAELLELIKRLGLQDRVTFVGHCSDMPA 259 (355)
T ss_pred CceEEEEeeccccccCHHHHHHHHHHHHhcCCCeEEEEEECCc----ccchHHHHHHHHHHHcCCcceEEEcCCcccHHH
Confidence 4467777887664 33455666666665533333333222211 1111111111 1112 347888888544 55
Q ss_pred hhcCCCceeeeec--cCh-hhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeeccCCCCcccHHHHHHHHHHHhc
Q 011765 351 ILAHDSVGGFLTH--AGW-SSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLV 427 (478)
Q Consensus 351 vL~~~~~~~~ItH--gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~ 427 (478)
++..+++-++-++ -|+ +++.||+++|+|+|+... ......+.+.+.|..++.. +.+++.++|..++.
T Consensus 260 ~l~~ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~----~~~~e~i~~~~~g~~~~~~------~~~~l~~~i~~~~~ 329 (355)
T cd03819 260 AYALADIVVSASTEPEAFGRTAVEAQAMGRPVIASDH----GGARETVRPGETGLLVPPG------DAEALAQALDQILS 329 (355)
T ss_pred HHHhCCEEEecCCCCCCCchHHHHHHhcCCCEEEcCC----CCcHHHHhCCCceEEeCCC------CHHHHHHHHHHHHh
Confidence 7888888333331 233 699999999999998543 3445566666688888653 88999999976654
Q ss_pred ccchHHHHHHHHH
Q 011765 428 EEKGQIYRDKAKE 440 (478)
Q Consensus 428 ~~~~~~~~~~a~~ 440 (478)
. +++.++++.+
T Consensus 330 ~--~~~~~~~~~~ 340 (355)
T cd03819 330 L--LPEGRAKMFA 340 (355)
T ss_pred h--CHHHHHHHHH
Confidence 2 3444443333
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. |
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.13 E-value=2.6e-08 Score=96.66 Aligned_cols=322 Identities=16% Similarity=0.088 Sum_probs=163.4
Q ss_pred EEEEecCC--CccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCCCCCCCCccccCCCCh
Q 011765 8 QIAMFPWL--AFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVDNLRENAEATIDLPY 85 (478)
Q Consensus 8 ~il~~~~~--~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~~~~~~~ 85 (478)
||++++.. ..|+-..+..++++|.+.||+|++++............ .... ... ..... ....
T Consensus 1 kIl~~~~~~~~gG~~~~~~~l~~~l~~~g~~v~v~~~~~~~~~~~~~~----~~~~--~~~------~~~~~----~~~~ 64 (353)
T cd03811 1 KILFVIPSLGGGGAERVLLNLANGLDKRGYDVTLVVLRDEGDYLELLP----SNVK--LIP------VRVLK----LKSL 64 (353)
T ss_pred CeEEEeecccCCCcchhHHHHHHHHHhcCceEEEEEcCCCCccccccc----cchh--hhc------eeeee----cccc
Confidence 46666544 45888889999999999999999999876544322211 0000 000 00000 0000
Q ss_pred hHHHHHHHHHhhhhHHHHHHHhhcCCCEEEEcCC-cc-cHHHHHHHhCCCeEEEecchHHHHHhhccccccccccCCCCC
Q 011765 86 DEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFA-AY-WLPARARELGIPSGFFSIFTAATLGYFGPSSVLINDSGDHLK 163 (478)
Q Consensus 86 ~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~-~~-~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (478)
. .......+.+++++.+||+|++... .. ....++..+++|++.............
T Consensus 65 ~--------~~~~~~~~~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--------------- 121 (353)
T cd03811 65 R--------DLLAILRLRRLLRKEKPDVVISHLTTTPNVLALLAARLGTKLIVWEHNSLSLELKR--------------- 121 (353)
T ss_pred c--------chhHHHHHHHHHHhcCCCEEEEcCccchhHHHHHHhhcCCceEEEEcCcchhhhcc---------------
Confidence 0 0111235666777789999998875 22 222334444789887644222110000
Q ss_pred CCCcccCCCcccccccccccchhhhhhhhhhhcCCcccchhhhhhhccccCCcEEEEcCcCccChHHHHHHHhhcC---C
Q 011765 164 TPEDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLHR---K 240 (478)
Q Consensus 164 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~~~~~~---~ 240 (478)
. ... . .........++.+++.+... .+.....++ .
T Consensus 122 ----------~--------~~~-----------------~--~~~~~~~~~~d~ii~~s~~~-----~~~~~~~~~~~~~ 159 (353)
T cd03811 122 ----------K--------LRL-----------------L--LLIRKLYRRADKIVAVSEGV-----KEDLLKLLGIPPD 159 (353)
T ss_pred ----------c--------hhH-----------------H--HHHHhhccccceEEEeccch-----hhhHHHhhcCCcc
Confidence 0 000 0 11222345667777766332 222223332 3
Q ss_pred CeeeeccCCCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccC-CCHHHHHHHHHHHHhC--CCCEEEEEecCC
Q 011765 241 PVIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAK-PSQEELTEIALGLELS--KLPFFWVLKKRL 317 (478)
Q Consensus 241 ~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~-~~~~~~~~~~~al~~~--~~~~i~~~~~~~ 317 (478)
++..+.+-....... ....... .+ ...+++.+++..|+... ...+.+.+.++.+... +.+++++-.+.
T Consensus 160 ~~~vi~~~~~~~~~~-----~~~~~~~--~~-~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~l~~~~~~~~l~i~G~~~- 230 (353)
T cd03811 160 KIEVIYNPIDIEEIR-----ALAEEPL--EL-GIPPDGPVILAVGRLSPQKGFDTLIRAFALLRKEGPDARLVILGDGP- 230 (353)
T ss_pred ccEEecCCcChhhcC-----cccchhh--hc-CCCCCceEEEEEecchhhcChHHHHHHHHHhhhcCCCceEEEEcCCc-
Confidence 455555222211100 0000000 00 11234477788888763 2234444444444433 33444432211
Q ss_pred CCCCCCCCCCChhhhhhc-CCCcEEEeccCCh-hhhhcCCCceeeee--c--cChhhHHHHHHhCCcEeccccccchhhH
Q 011765 318 GQADTEPIELPDGFEERT-RGRGVVYTSWAPQ-LAILAHDSVGGFLT--H--AGWSSVVEALQFGMPLIVLTCYADQGLN 391 (478)
Q Consensus 318 ~~~~~~~~~~p~~~~~~~-~~~n~~~~~~vpq-~~vL~~~~~~~~It--H--gG~~s~~eal~~GvP~l~~P~~~DQ~~n 391 (478)
. ...+- ...++. ..+++.+..+.++ .+++..+++ +|. + |.-+++.||+++|+|+|+... ...
T Consensus 231 ~-----~~~~~-~~~~~~~~~~~v~~~g~~~~~~~~~~~~d~--~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~----~~~ 298 (353)
T cd03811 231 L-----REELE-ALAKELGLADRVHFLGFQSNPYPYLKAADL--FVLSSRYEGFPNVLLEAMALGTPVVATDC----PGP 298 (353)
T ss_pred c-----HHHHH-HHHHhcCCCccEEEecccCCHHHHHHhCCE--EEeCcccCCCCcHHHHHHHhCCCEEEcCC----CCh
Confidence 0 00000 111222 2347777777765 457888887 552 2 334789999999999998544 366
Q ss_pred HHHHhhcCeEEEeeccCCCCcccHHHH---HHHHHHHhcccchHHHHHHHHH
Q 011765 392 AKLLEEKQIVELIPRDEGDGFFTRNSV---AESLRLVLVEEKGQIYRDKAKE 440 (478)
Q Consensus 392 a~~v~~~g~G~~l~~~~~~~~~~~~~l---~~~i~~ll~~~~~~~~~~~a~~ 440 (478)
+..+.+.+.|...+.. +.+.+ .+++.++++ ++..+++++.
T Consensus 299 ~e~i~~~~~g~~~~~~------~~~~~~~~~~~i~~~~~---~~~~~~~~~~ 341 (353)
T cd03811 299 REILEDGENGLLVPVG------DEAALAAAALALLDLLL---DPELRERLAA 341 (353)
T ss_pred HHHhcCCCceEEECCC------CHHHHHHHHHHHHhccC---ChHHHHHHHH
Confidence 6777777889888764 56666 555656666 5555555444
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. |
| >PRK14089 ipid-A-disaccharide synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=3.4e-08 Score=95.02 Aligned_cols=160 Identities=11% Similarity=0.095 Sum_probs=103.2
Q ss_pred CceEEEEeCcccCCCHHHHHHHHHHHHhCCCC-EEEEEecCCCCCCCCCCCCChhhhhhcCC-CcEEEeccCChhhhhcC
Q 011765 277 GSVVYVAFGSEAKPSQEELTEIALGLELSKLP-FFWVLKKRLGQADTEPIELPDGFEERTRG-RGVVYTSWAPQLAILAH 354 (478)
Q Consensus 277 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~-~i~~~~~~~~~~~~~~~~~p~~~~~~~~~-~n~~~~~~vpq~~vL~~ 354 (478)
+++|.+--||....-...+..+.++.+++..+ ..+++.... .. +.+.+.... ..+.+.+ ...+++..
T Consensus 167 ~~~I~llPGSR~~Ei~~llP~~~~aa~~L~~~~~~~~i~~a~--------~~-~~i~~~~~~~~~~~~~~--~~~~~m~~ 235 (347)
T PRK14089 167 EGTIAFMPGSRKSEIKRLMPIFKELAKKLEGKEKILVVPSFF--------KG-KDLKEIYGDISEFEISY--DTHKALLE 235 (347)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCcEEEEeCCC--------cH-HHHHHHHhcCCCcEEec--cHHHHHHh
Confidence 36888988987642234445444555433222 233332211 11 222222211 1222222 33568888
Q ss_pred CCceeeeeccChhhHHHHHHhCCcEecccc--ccchhhHHHHHh---hcCeEEEe-------------eccCCCCcccHH
Q 011765 355 DSVGGFLTHAGWSSVVEALQFGMPLIVLTC--YADQGLNAKLLE---EKQIVELI-------------PRDEGDGFFTRN 416 (478)
Q Consensus 355 ~~~~~~ItHgG~~s~~eal~~GvP~l~~P~--~~DQ~~na~~v~---~~g~G~~l-------------~~~~~~~~~~~~ 416 (478)
+++ +|+-.|..|+ |+..+|+|+|+ ++ ..-|+.||+++. ..|++-.+ -..+ +|++
T Consensus 236 aDl--al~~SGT~TL-E~al~g~P~Vv-~Yk~~~lty~iak~lv~~~~igL~Nii~~~~~~~~vvPEllQ~~----~t~~ 307 (347)
T PRK14089 236 AEF--AFICSGTATL-EAALIGTPFVL-AYKAKAIDYFIAKMFVKLKHIGLANIFFDFLGKEPLHPELLQEF----VTVE 307 (347)
T ss_pred hhH--HHhcCcHHHH-HHHHhCCCEEE-EEeCCHHHHHHHHHHHcCCeeehHHHhcCCCcccccCchhhccc----CCHH
Confidence 888 9999999999 99999999988 44 457899999998 55655555 2233 8999
Q ss_pred HHHHHHHHHhcccchHHHHHHHHHHHHHhcccCChHHHHHHHHH
Q 011765 417 SVAESLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLN 460 (478)
Q Consensus 417 ~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~ 460 (478)
.|.+++.+ +. .+.+++...++++.+.. +++.++++.+.+
T Consensus 308 ~la~~i~~-~~---~~~~~~~~~~l~~~l~~-~a~~~~A~~i~~ 346 (347)
T PRK14089 308 NLLKAYKE-MD---REKFFKKSKELREYLKH-GSAKNVAKILKE 346 (347)
T ss_pred HHHHHHHH-HH---HHHHHHHHHHHHHHhcC-CHHHHHHHHHhc
Confidence 99999988 34 57899999999998854 777777776654
|
|
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.10 E-value=2.9e-07 Score=91.71 Aligned_cols=86 Identities=15% Similarity=0.081 Sum_probs=61.1
Q ss_pred CCcEEEeccCChh---hhhcCCCceeeeec---cC-hhhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeeccCC
Q 011765 337 GRGVVYTSWAPQL---AILAHDSVGGFLTH---AG-WSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEG 409 (478)
Q Consensus 337 ~~n~~~~~~vpq~---~vL~~~~~~~~ItH---gG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~ 409 (478)
.+++.+..++|+. .++..+++ ++.. -| -.++.||+++|+|+|+.-.. .....+.+.+.|...+
T Consensus 279 ~~~V~f~g~~~~~~~~~~l~~ad~--~l~~s~~E~~g~~~lEAma~G~PvI~s~~~----~~~e~i~~~~~g~~~~---- 348 (392)
T cd03805 279 EDQVIFLPSISDSQKELLLSSARA--LLYTPSNEHFGIVPLEAMYAGKPVIACNSG----GPLETVVDGETGFLCE---- 348 (392)
T ss_pred CceEEEeCCCChHHHHHHHhhCeE--EEECCCcCCCCchHHHHHHcCCCEEEECCC----CcHHHhccCCceEEeC----
Confidence 3689999999986 46777887 6632 22 25789999999999996443 3444565556777764
Q ss_pred CCcccHHHHHHHHHHHhcccchHHHHHHH
Q 011765 410 DGFFTRNSVAESLRLVLVEEKGQIYRDKA 438 (478)
Q Consensus 410 ~~~~~~~~l~~~i~~ll~~~~~~~~~~~a 438 (478)
.+.++++++|.++++ +++.++++
T Consensus 349 ---~~~~~~a~~i~~l~~---~~~~~~~~ 371 (392)
T cd03805 349 ---PTPEEFAEAMLKLAN---DPDLADRM 371 (392)
T ss_pred ---CCHHHHHHHHHHHHh---ChHHHHHH
Confidence 267899999999999 55544443
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. |
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.06 E-value=3.9e-07 Score=89.31 Aligned_cols=92 Identities=21% Similarity=0.143 Sum_probs=64.4
Q ss_pred CCcEEEeccCChhh---hhcCCCceeeee--c-cC-hhhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeeccCC
Q 011765 337 GRGVVYTSWAPQLA---ILAHDSVGGFLT--H-AG-WSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEG 409 (478)
Q Consensus 337 ~~n~~~~~~vpq~~---vL~~~~~~~~It--H-gG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~ 409 (478)
.+++.+..|+++.+ ++..+++ +|. + .| .+++.||+++|+|+|+.+. ......+.+ +.|...+.
T Consensus 261 ~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~~~~~~-~~~~~~~~--- 330 (375)
T cd03821 261 EDRVTFTGMLYGEDKAAALADADL--FVLPSHSENFGIVVAEALACGTPVVTTDK----VPWQELIEY-GCGWVVDD--- 330 (375)
T ss_pred cceEEEcCCCChHHHHHHHhhCCE--EEeccccCCCCcHHHHHHhcCCCEEEcCC----CCHHHHhhc-CceEEeCC---
Confidence 45888999999644 5677787 553 2 22 3689999999999999653 344555555 77776653
Q ss_pred CCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHh
Q 011765 410 DGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLF 445 (478)
Q Consensus 410 ~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~ 445 (478)
+.+++.++|.++++ +++.++++.+-+...
T Consensus 331 ----~~~~~~~~i~~l~~---~~~~~~~~~~~~~~~ 359 (375)
T cd03821 331 ----DVDALAAALRRALE---LPQRLKAMGENGRAL 359 (375)
T ss_pred ----ChHHHHHHHHHHHh---CHHHHHHHHHHHHHH
Confidence 45999999999999 655555555444443
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. |
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Probab=99.06 E-value=2.3e-07 Score=90.78 Aligned_cols=144 Identities=17% Similarity=0.156 Sum_probs=83.7
Q ss_pred CceEEEEeCcccC-CCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCCCCChhhhhhc-CCCcEEEeccCChhh---h
Q 011765 277 GSVVYVAFGSEAK-PSQEELTEIALGLELSKLPFFWVLKKRLGQADTEPIELPDGFEERT-RGRGVVYTSWAPQLA---I 351 (478)
Q Consensus 277 ~~~v~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~-~~~n~~~~~~vpq~~---v 351 (478)
++.+++.+|+... .+.+.+.+.+..+...+.++.+.+-+... ....+ ..+.++. ..+++.+..++|+.+ +
T Consensus 178 ~~~~i~~~g~~~~~k~~~~l~~~~~~l~~~~~~~~l~i~G~~~----~~~~~-~~~~~~~~~~~~v~~~g~~~~~~l~~~ 252 (355)
T cd03799 178 EPLRILSVGRLVEKKGLDYLLEALALLKDRGIDFRLDIVGDGP----LRDEL-EALIAELGLEDRVTLLGAKSQEEVREL 252 (355)
T ss_pred CCeEEEEEeeeccccCHHHHHHHHHHHhhcCCCeEEEEEECCc----cHHHH-HHHHHHcCCCCeEEECCcCChHHHHHH
Confidence 3466777787653 23344444444444433333333322211 00000 0111111 235899999998644 6
Q ss_pred hcCCCceeeee--c--------cChhhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeeccCCCCcccHHHHHHH
Q 011765 352 LAHDSVGGFLT--H--------AGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAES 421 (478)
Q Consensus 352 L~~~~~~~~It--H--------gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~~~~~~~~~l~~~ 421 (478)
+..+++ +|. . |.-+++.||+++|+|+|+.+... ....+.+...|...+.. +.+++.++
T Consensus 253 ~~~adi--~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~----~~~~i~~~~~g~~~~~~------~~~~l~~~ 320 (355)
T cd03799 253 LRAADL--FVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSG----IPELVEDGETGLLVPPG------DPEALADA 320 (355)
T ss_pred HHhCCE--EEecceecCCCCccCccHHHHHHHHcCCCEEecCCCC----cchhhhCCCceEEeCCC------CHHHHHHH
Confidence 667787 554 2 33479999999999999865432 33345444578777653 78999999
Q ss_pred HHHHhcccchHHHHHHHHH
Q 011765 422 LRLVLVEEKGQIYRDKAKE 440 (478)
Q Consensus 422 i~~ll~~~~~~~~~~~a~~ 440 (478)
|.++++ ++..++++.+
T Consensus 321 i~~~~~---~~~~~~~~~~ 336 (355)
T cd03799 321 IERLLD---DPELRREMGE 336 (355)
T ss_pred HHHHHh---CHHHHHHHHH
Confidence 999999 6554444433
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. |
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.02 E-value=4.4e-07 Score=90.60 Aligned_cols=165 Identities=11% Similarity=0.062 Sum_probs=88.4
Q ss_pred CceEEEEeCcccC-CCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCCCCChhhh---hhcC-CCcEEEeccCChhh-
Q 011765 277 GSVVYVAFGSEAK-PSQEELTEIALGLELSKLPFFWVLKKRLGQADTEPIELPDGFE---ERTR-GRGVVYTSWAPQLA- 350 (478)
Q Consensus 277 ~~~v~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~---~~~~-~~n~~~~~~vpq~~- 350 (478)
+..+++..|.... .+.+.+.+.+..+.+...++.+.+-+... ..+.+. ++.. .+++.+..|+|+.+
T Consensus 192 ~~~~i~~~grl~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~--------~~~~l~~~~~~~~l~~~v~~~G~~~~~~~ 263 (398)
T cd03796 192 DKITIVVISRLVYRKGIDLLVGIIPEICKKHPNVRFIIGGDGP--------KRILLEEMREKYNLQDRVELLGAVPHERV 263 (398)
T ss_pred CceEEEEEeccchhcCHHHHHHHHHHHHhhCCCEEEEEEeCCc--------hHHHHHHHHHHhCCCCeEEEeCCCCHHHH
Confidence 4477777887654 23344444444443333333333322211 111122 2222 34688889998744
Q ss_pred --hhcCCCceeeee---ccCh-hhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeeccCCCCcccHHHHHHHHHH
Q 011765 351 --ILAHDSVGGFLT---HAGW-SSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRL 424 (478)
Q Consensus 351 --vL~~~~~~~~It---HgG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~~~~~~~~~l~~~i~~ 424 (478)
+++.+++ +|. +-|. .++.||+++|+|+|+.+..+ ....+. .|-+... . -+.+++.+++.+
T Consensus 264 ~~~l~~ad~--~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg----~~e~i~-~~~~~~~--~-----~~~~~l~~~l~~ 329 (398)
T cd03796 264 RDVLVQGHI--FLNTSLTEAFCIAIVEAASCGLLVVSTRVGG----IPEVLP-PDMILLA--E-----PDVESIVRKLEE 329 (398)
T ss_pred HHHHHhCCE--EEeCChhhccCHHHHHHHHcCCCEEECCCCC----chhhee-CCceeec--C-----CCHHHHHHHHHH
Confidence 6677777 653 2244 49999999999999977643 223333 3433222 2 377999999999
Q ss_pred HhcccchHHHH-HHHHHHHHHhcccCChHHHHHHHHHHHHhcc
Q 011765 425 VLVEEKGQIYR-DKAKEMKGLFGDKGRHDRYVDNFLNYLKNHR 466 (478)
Q Consensus 425 ll~~~~~~~~~-~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 466 (478)
+++ +..-+ ...+...+.+.+.-+-+..++..++.+++..
T Consensus 330 ~l~---~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~~l~ 369 (398)
T cd03796 330 AIS---ILRTGKHDPWSFHNRVKKMYSWEDVAKRTEKVYDRIL 369 (398)
T ss_pred HHh---ChhhhhhHHHHHHHHHHhhCCHHHHHHHHHHHHHHHh
Confidence 998 32211 1122222333343444555566666555433
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. |
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Probab=99.01 E-value=6.4e-07 Score=89.05 Aligned_cols=170 Identities=12% Similarity=0.162 Sum_probs=94.6
Q ss_pred ceEEEEeCcccCCCHHHHHHHHHHHHhC--CCCEEEEEecCCCCCCCCCCCCChhhhhhc-----CCCcEEE-eccCChh
Q 011765 278 SVVYVAFGSEAKPSQEELTEIALGLELS--KLPFFWVLKKRLGQADTEPIELPDGFEERT-----RGRGVVY-TSWAPQL 349 (478)
Q Consensus 278 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~-----~~~n~~~-~~~vpq~ 349 (478)
.++++..|.... ...+..++++++.. +.+++++.++.. ...+-+.+.+.. ...++.. ..+++..
T Consensus 201 ~~~i~~~Grl~~--~Kg~~~li~a~~~l~~~~~l~i~g~g~~------~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 272 (388)
T TIGR02149 201 RPYILFVGRITR--QKGVPHLLDAVHYIPKDVQVVLCAGAPD------TPEVAEEVRQAVALLDRNRTGIIWINKMLPKE 272 (388)
T ss_pred ceEEEEEccccc--ccCHHHHHHHHHHHhhcCcEEEEeCCCC------cHHHHHHHHHHHHHhccccCceEEecCCCCHH
Confidence 356667787663 34455555666543 345555443321 111111111111 1123443 3567764
Q ss_pred ---hhhcCCCceeeeec----cChhhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeeccCCCCcccHHHHHHHH
Q 011765 350 ---AILAHDSVGGFLTH----AGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESL 422 (478)
Q Consensus 350 ---~vL~~~~~~~~ItH----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~~~~~~~~~l~~~i 422 (478)
+++..+++ +|.= +...++.||+++|+|+|+... ......+++.+.|..++..+.+..-..+++.++|
T Consensus 273 ~~~~~~~~aDv--~v~ps~~e~~g~~~lEA~a~G~PvI~s~~----~~~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i 346 (388)
T TIGR02149 273 ELVELLSNAEV--FVCPSIYEPLGIVNLEAMACGTPVVASAT----GGIPEVVVDGETGFLVPPDNSDADGFQAELAKAI 346 (388)
T ss_pred HHHHHHHhCCE--EEeCCccCCCChHHHHHHHcCCCEEEeCC----CCHHHHhhCCCceEEcCCCCCcccchHHHHHHHH
Confidence 46777887 6642 223578999999999999654 4466667666788888765300001128999999
Q ss_pred HHHhcccchHHHHHHHHHHHHH-hcccCChHHHHHHHHHHHHh
Q 011765 423 RLVLVEEKGQIYRDKAKEMKGL-FGDKGRHDRYVDNFLNYLKN 464 (478)
Q Consensus 423 ~~ll~~~~~~~~~~~a~~~~~~-~~~~~~~~~~~~~i~~~~~~ 464 (478)
.++++ |++.++++.+-+.. ..+.-.-+..++.+++.+++
T Consensus 347 ~~l~~---~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~y~~ 386 (388)
T TIGR02149 347 NILLA---DPELAKKMGIAGRKRAEEEFSWGSIAKKTVEMYRK 386 (388)
T ss_pred HHHHh---CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 99998 66655554443333 22333345566666666654
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor. |
| >cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.9e-07 Score=91.66 Aligned_cols=109 Identities=16% Similarity=0.144 Sum_probs=70.2
Q ss_pred CcEEEeccCCh-hhhhcCCCceeeeec----cChhhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeeccCCCCc
Q 011765 338 RGVVYTSWAPQ-LAILAHDSVGGFLTH----AGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGF 412 (478)
Q Consensus 338 ~n~~~~~~vpq-~~vL~~~~~~~~ItH----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~~~~ 412 (478)
+++.+..+..+ .+++..+++ +|.- |..+++.||+++|+|+|+. |...+...+++ .|.....
T Consensus 245 ~~v~~~g~~~~~~~~~~~ad~--~v~~s~~e~~~~~~~Ea~a~G~PvI~~----~~~~~~e~i~~--~g~~~~~------ 310 (360)
T cd04951 245 NRVKLLGLRDDIAAYYNAADL--FVLSSAWEGFGLVVAEAMACELPVVAT----DAGGVREVVGD--SGLIVPI------ 310 (360)
T ss_pred CcEEEecccccHHHHHHhhce--EEecccccCCChHHHHHHHcCCCEEEe----cCCChhhEecC--CceEeCC------
Confidence 46777777655 567888887 5532 2247899999999999974 45556666665 3444443
Q ss_pred ccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhcccCChHHHHHHHHHHH
Q 011765 413 FTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYL 462 (478)
Q Consensus 413 ~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~ 462 (478)
-+.+++.+++.++++. ++.+++.+..-++.+.+.=+-+..++.+++.+
T Consensus 311 ~~~~~~~~~i~~ll~~--~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y 358 (360)
T cd04951 311 SDPEALANKIDEILKM--SGEERDIIGARRERIVKKFSINSIVQQWLTLY 358 (360)
T ss_pred CCHHHHHHHHHHHHhC--CHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHh
Confidence 2888999999999942 45666655554444444333344555555543
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have |
| >PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.4e-07 Score=92.81 Aligned_cols=129 Identities=16% Similarity=0.231 Sum_probs=78.1
Q ss_pred ceEEEEeCcccCCCHHHHHHHHHHHHhCCCC--EEEEEecCCCCCCCCCCCCChhhhhhc----CCCcEEEeccCCh--h
Q 011765 278 SVVYVAFGSEAKPSQEELTEIALGLELSKLP--FFWVLKKRLGQADTEPIELPDGFEERT----RGRGVVYTSWAPQ--L 349 (478)
Q Consensus 278 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~--~i~~~~~~~~~~~~~~~~~p~~~~~~~----~~~n~~~~~~vpq--~ 349 (478)
+.+++..|.........+..+++++.+.... ++++-.+. .. +.+.+.. ..+++.+..|+++ .
T Consensus 180 ~~~i~~~Grl~~~~~k~~~~l~~a~~~~~~~~~l~ivG~g~------~~----~~l~~~~~~~~l~~~v~f~G~~~~~~~ 249 (359)
T PRK09922 180 PAVFLYVGRLKFEGQKNVKELFDGLSQTTGEWQLHIIGDGS------DF----EKCKAYSRELGIEQRIIWHGWQSQPWE 249 (359)
T ss_pred CcEEEEEEEEecccCcCHHHHHHHHHhhCCCeEEEEEeCCc------cH----HHHHHHHHHcCCCCeEEEecccCCcHH
Confidence 3666778876533344566677777655333 33332221 11 1222111 2357888888754 2
Q ss_pred h---hhcCCCceeeee--c--cChhhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeeccCCCCcccHHHHHHHH
Q 011765 350 A---ILAHDSVGGFLT--H--AGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESL 422 (478)
Q Consensus 350 ~---vL~~~~~~~~It--H--gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~~~~~~~~~l~~~i 422 (478)
. .+..+++ +|. + |--.++.||+++|+|+|+.-. .......+++...|..++.. +.++++++|
T Consensus 250 ~~~~~~~~~d~--~v~~s~~Egf~~~~lEAma~G~Pvv~s~~---~~g~~eiv~~~~~G~lv~~~------d~~~la~~i 318 (359)
T PRK09922 250 VVQQKIKNVSA--LLLTSKFEGFPMTLLEAMSYGIPCISSDC---MSGPRDIIKPGLNGELYTPG------NIDEFVGKL 318 (359)
T ss_pred HHHHHHhcCcE--EEECCcccCcChHHHHHHHcCCCEEEeCC---CCChHHHccCCCceEEECCC------CHHHHHHHH
Confidence 2 3444566 663 3 224799999999999998651 22233345555678877653 899999999
Q ss_pred HHHhc
Q 011765 423 RLVLV 427 (478)
Q Consensus 423 ~~ll~ 427 (478)
.++++
T Consensus 319 ~~l~~ 323 (359)
T PRK09922 319 NKVIS 323 (359)
T ss_pred HHHHh
Confidence 99999
|
|
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.98 E-value=4e-07 Score=88.37 Aligned_cols=128 Identities=11% Similarity=0.019 Sum_probs=76.7
Q ss_pred eEEEEeCcccCCCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCCCCChhhhhhc--CCCcEEEeccCChhh---hhc
Q 011765 279 VVYVAFGSEAKPSQEELTEIALGLELSKLPFFWVLKKRLGQADTEPIELPDGFEERT--RGRGVVYTSWAPQLA---ILA 353 (478)
Q Consensus 279 ~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~--~~~n~~~~~~vpq~~---vL~ 353 (478)
.+++..|... .......+++++++.+.+++++-.+... .. ........ ..+++.+..++++.+ +++
T Consensus 172 ~~i~~~Gr~~--~~Kg~~~li~~~~~~~~~l~i~G~~~~~------~~-~~~~~~~~~~~~~~v~~~G~~~~~~~~~~~~ 242 (335)
T cd03802 172 DYLLFLGRIS--PEKGPHLAIRAARRAGIPLKLAGPVSDP------DY-FYREIAPELLDGPDIEYLGEVGGAEKAELLG 242 (335)
T ss_pred CEEEEEEeec--cccCHHHHHHHHHhcCCeEEEEeCCCCH------HH-HHHHHHHhcccCCcEEEeCCCCHHHHHHHHH
Confidence 3455567764 3344455667777777776655432210 00 01111111 146899999998854 577
Q ss_pred CCCceeeee--ccCh-hhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeeccCCCCcccHHHHHHHHHHHhc
Q 011765 354 HDSVGGFLT--HAGW-SSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLV 427 (478)
Q Consensus 354 ~~~~~~~It--HgG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~ 427 (478)
.+++-++-+ +-|. .++.||+++|+|+|+.... .....+.+...|...+ ..+++.+++.++++
T Consensus 243 ~~d~~v~ps~~~E~~~~~~lEAma~G~PvI~~~~~----~~~e~i~~~~~g~l~~--------~~~~l~~~l~~l~~ 307 (335)
T cd03802 243 NARALLFPILWEEPFGLVMIEAMACGTPVIAFRRG----AVPEVVEDGVTGFLVD--------SVEELAAAVARADR 307 (335)
T ss_pred hCcEEEeCCcccCCcchHHHHHHhcCCCEEEeCCC----CchhheeCCCcEEEeC--------CHHHHHHHHHHHhc
Confidence 788733323 2344 5899999999999986543 3334444433566553 37889999998876
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. |
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=98.97 E-value=4.6e-07 Score=89.29 Aligned_cols=89 Identities=18% Similarity=0.244 Sum_probs=65.8
Q ss_pred CCcEEEeccCChhh---hhcCCCceeeeec----------cChhhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEE
Q 011765 337 GRGVVYTSWAPQLA---ILAHDSVGGFLTH----------AGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVEL 403 (478)
Q Consensus 337 ~~n~~~~~~vpq~~---vL~~~~~~~~ItH----------gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~ 403 (478)
.+++.+..++|+.+ ++..+++ +|.- |-.+++.||+++|+|+|+.+.. .++..+.+.+.|..
T Consensus 244 ~~~v~~~g~~~~~~l~~~~~~ad~--~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~----~~~e~i~~~~~g~~ 317 (367)
T cd05844 244 GGRVTFLGAQPHAEVRELMRRARI--FLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHG----GIPEAVEDGETGLL 317 (367)
T ss_pred CCeEEECCCCCHHHHHHHHHhCCE--EEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCC----CchhheecCCeeEE
Confidence 35788888998754 5777787 5532 2247999999999999986654 36666777788888
Q ss_pred eeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHH
Q 011765 404 IPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKE 440 (478)
Q Consensus 404 l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~ 440 (478)
.+.. +.+++.++|.++++ |++.++++.+
T Consensus 318 ~~~~------d~~~l~~~i~~l~~---~~~~~~~~~~ 345 (367)
T cd05844 318 VPEG------DVAALAAALGRLLA---DPDLRARMGA 345 (367)
T ss_pred ECCC------CHHHHHHHHHHHHc---CHHHHHHHHH
Confidence 7753 78999999999999 6665544433
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=98.97 E-value=1.3e-06 Score=93.85 Aligned_cols=184 Identities=10% Similarity=0.159 Sum_probs=100.7
Q ss_pred hhhHhhhcccCCCCceEEEEeCcccCCCHHHHHHHHHHHHhCC-----CCEEEEEecCCCCCCCC--CCCCChhhh---h
Q 011765 264 WRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELSK-----LPFFWVLKKRLGQADTE--PIELPDGFE---E 333 (478)
Q Consensus 264 ~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~-----~~~i~~~~~~~~~~~~~--~~~~p~~~~---~ 333 (478)
+.++..|+.. +++ .++++.|.... ...+..+++|+..+. ..+.++++.....++.. ....-..+. +
T Consensus 467 ~~~l~r~~~~-pdk-pvIL~VGRL~p--~KGi~~LIeAf~~L~~l~~~~nL~LIiG~gdd~d~l~~~~~~~l~~L~~li~ 542 (1050)
T TIGR02468 467 WSEIMRFFTN-PRK-PMILALARPDP--KKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSSGSSSVLTSVLKLID 542 (1050)
T ss_pred hHHHHhhccc-CCC-cEEEEEcCCcc--ccCHHHHHHHHHHhHhhccCCCEEEEEecCchhhhhhccchHHHHHHHHHHH
Confidence 4567777753 334 45566777663 333444555554321 24444454321100000 000001111 1
Q ss_pred hcC-CCcEEEeccCChhh---hhcCCC--ceeeeec---cCh-hhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEE
Q 011765 334 RTR-GRGVVYTSWAPQLA---ILAHDS--VGGFLTH---AGW-SSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVEL 403 (478)
Q Consensus 334 ~~~-~~n~~~~~~vpq~~---vL~~~~--~~~~ItH---gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~ 403 (478)
+.. .++|.+..++++.+ ++..++ .++||.- =|. .++.||+++|+|+|+....+ ....+....-|..
T Consensus 543 ~lgL~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG----~~EII~~g~nGlL 618 (1050)
T TIGR02468 543 KYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGG----PVDIHRVLDNGLL 618 (1050)
T ss_pred HhCCCCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCC----cHHHhccCCcEEE
Confidence 111 34677778888755 444442 1237753 343 69999999999999976532 3334444456888
Q ss_pred eeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHh
Q 011765 404 IPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLKN 464 (478)
Q Consensus 404 l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~ 464 (478)
++.. +.+.|+++|.++++ |++.++++.+-+......-+-...++..++.+..
T Consensus 619 VdP~------D~eaLA~AL~~LL~---Dpelr~~m~~~gr~~v~~FSWe~ia~~yl~~i~~ 670 (1050)
T TIGR02468 619 VDPH------DQQAIADALLKLVA---DKQLWAECRQNGLKNIHLFSWPEHCKTYLSRIAS 670 (1050)
T ss_pred ECCC------CHHHHHHHHHHHhh---CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
Confidence 7764 78999999999999 7776666555444333333335555555555543
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.97 E-value=1.8e-06 Score=84.26 Aligned_cols=107 Identities=19% Similarity=0.280 Sum_probs=67.6
Q ss_pred CcEEEeccCCh-hhhhcCCCceeeeeccC----hhhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeeccCCCCc
Q 011765 338 RGVVYTSWAPQ-LAILAHDSVGGFLTHAG----WSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGF 412 (478)
Q Consensus 338 ~n~~~~~~vpq-~~vL~~~~~~~~ItHgG----~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~~~~ 412 (478)
.++.+.....+ ..++..+++ +|.... .+++.||+++|+|+|+.. ...+...+.+ .|..++..
T Consensus 251 ~~v~~~g~~~~~~~~~~~adi--~v~ps~~e~~~~~~~Ea~a~g~PvI~~~----~~~~~e~~~~--~g~~~~~~----- 317 (365)
T cd03807 251 DKVILLGERSDVPALLNALDV--FVLSSLSEGFPNVLLEAMACGLPVVATD----VGDNAELVGD--TGFLVPPG----- 317 (365)
T ss_pred ceEEEccccccHHHHHHhCCE--EEeCCccccCCcHHHHHHhcCCCEEEcC----CCChHHHhhc--CCEEeCCC-----
Confidence 35655554443 557888888 775433 379999999999999854 4445555555 56666543
Q ss_pred ccHHHHHHHHHHHhcccchHHHHHH-HHHHHHHhcccCChHHHHHHHHHH
Q 011765 413 FTRNSVAESLRLVLVEEKGQIYRDK-AKEMKGLFGDKGRHDRYVDNFLNY 461 (478)
Q Consensus 413 ~~~~~l~~~i~~ll~~~~~~~~~~~-a~~~~~~~~~~~~~~~~~~~i~~~ 461 (478)
+.+++.+++.++++ +++.++. .+...+.+.+.-+-.+.++.+++.
T Consensus 318 -~~~~l~~~i~~l~~---~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 363 (365)
T cd03807 318 -DPEALAEAIEALLA---DPALRQALGEAARERIEENFSIEAMVEAYEEL 363 (365)
T ss_pred -CHHHHHHHHHHHHh---ChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 78999999999999 5443333 333333343444445555555543
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. |
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.2e-06 Score=88.61 Aligned_cols=111 Identities=16% Similarity=0.109 Sum_probs=70.6
Q ss_pred CcEEEeccCChhhh---hcCC--Cceeeeecc---C-hhhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeeccC
Q 011765 338 RGVVYTSWAPQLAI---LAHD--SVGGFLTHA---G-WSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDE 408 (478)
Q Consensus 338 ~n~~~~~~vpq~~v---L~~~--~~~~~ItHg---G-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~ 408 (478)
+++.+..++++.++ +..+ ++++||.-. | -.++.||+++|+|+|+... ......+.+...|..++..
T Consensus 317 ~~V~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~----gg~~eiv~~~~~G~lv~~~- 391 (439)
T TIGR02472 317 GKVAYPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACGLPIVATDD----GGPRDIIANCRNGLLVDVL- 391 (439)
T ss_pred ceEEecCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhCCCEEEeCC----CCcHHHhcCCCcEEEeCCC-
Confidence 46777777777554 5444 123377542 3 3599999999999999654 3455555555678877664
Q ss_pred CCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHH-hcccCChHHHHHHHHHH
Q 011765 409 GDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGL-FGDKGRHDRYVDNFLNY 461 (478)
Q Consensus 409 ~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~-~~~~~~~~~~~~~i~~~ 461 (478)
++++++++|.++++ |+..++++.+-+.. ..+.-+-+..++.+++.
T Consensus 392 -----d~~~la~~i~~ll~---~~~~~~~~~~~a~~~~~~~fsw~~~~~~~~~l 437 (439)
T TIGR02472 392 -----DLEAIASALEDALS---DSSQWQLWSRNGIEGVRRHYSWDAHVEKYLRI 437 (439)
T ss_pred -----CHHHHHHHHHHHHh---CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 78999999999999 66655544443332 22233334445555443
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. |
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=98.95 E-value=9.6e-07 Score=87.40 Aligned_cols=111 Identities=15% Similarity=0.172 Sum_probs=72.1
Q ss_pred cEEEeccCCh-hhhhcCCCceeee--ec--cChhhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeeccCCCCcc
Q 011765 339 GVVYTSWAPQ-LAILAHDSVGGFL--TH--AGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFF 413 (478)
Q Consensus 339 n~~~~~~vpq-~~vL~~~~~~~~I--tH--gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~~~~~ 413 (478)
++.+..+..+ .+++..+++ +| ++ |--+++.||+++|+|+|+... ..+...+++-..|..++..
T Consensus 256 ~v~~~g~~~~~~~~~~~adi--~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~----~g~~e~i~~~~~g~~~~~~------ 323 (374)
T TIGR03088 256 LVWLPGERDDVPALMQALDL--FVLPSLAEGISNTILEAMASGLPVIATAV----GGNPELVQHGVTGALVPPG------ 323 (374)
T ss_pred eEEEcCCcCCHHHHHHhcCE--EEeccccccCchHHHHHHHcCCCEEEcCC----CCcHHHhcCCCceEEeCCC------
Confidence 4555554443 567888888 65 33 334799999999999999664 3355556555678887753
Q ss_pred cHHHHHHHHHHHhcccchHHHHHHHHHHHH-HhcccCChHHHHHHHHHHHHh
Q 011765 414 TRNSVAESLRLVLVEEKGQIYRDKAKEMKG-LFGDKGRHDRYVDNFLNYLKN 464 (478)
Q Consensus 414 ~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~-~~~~~~~~~~~~~~i~~~~~~ 464 (478)
+.++++++|.++++ +++.++.+.+-+. .+.+.=+.+..++.+++.+++
T Consensus 324 d~~~la~~i~~l~~---~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~ 372 (374)
T TIGR03088 324 DAVALARALQPYVS---DPAARRAHGAAGRARAEQQFSINAMVAAYAGLYDQ 372 (374)
T ss_pred CHHHHHHHHHHHHh---CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 78999999999998 6655444433322 233334445566666665543
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.94 E-value=2.4e-07 Score=90.86 Aligned_cols=142 Identities=18% Similarity=0.115 Sum_probs=83.5
Q ss_pred CceEEEEeCcccC-CCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCCCCChhhhhh---c-CCCcEEEeccCCh-hh
Q 011765 277 GSVVYVAFGSEAK-PSQEELTEIALGLELSKLPFFWVLKKRLGQADTEPIELPDGFEER---T-RGRGVVYTSWAPQ-LA 350 (478)
Q Consensus 277 ~~~v~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~---~-~~~n~~~~~~vpq-~~ 350 (478)
++.+++..|+... ...+.+.+.+..+.+.+.++-+.+-+.. ...+.+.+. . ..+++.+..+..+ .+
T Consensus 191 ~~~~i~~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g--------~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~ 262 (358)
T cd03812 191 DKFVIGHVGRFSEQKNHEFLIEIFAELLKKNPNAKLLLVGDG--------ELEEEIKKKVKELGLEDKVIFLGVRNDVPE 262 (358)
T ss_pred CCEEEEEEeccccccChHHHHHHHHHHHHhCCCeEEEEEeCC--------chHHHHHHHHHhcCCCCcEEEecccCCHHH
Confidence 4467777887664 2345555555555443334433333221 111111111 1 2346777776544 55
Q ss_pred hhcCCCceeeeec----cChhhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeeccCCCCcccHHHHHHHHHHHh
Q 011765 351 ILAHDSVGGFLTH----AGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVL 426 (478)
Q Consensus 351 vL~~~~~~~~ItH----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~~~~~~~~~l~~~i~~ll 426 (478)
++..+++ +|+- |-.+++.||+++|+|+|+....+ ....+.+ +.|..... . ++++++++|.+++
T Consensus 263 ~~~~adi--~v~ps~~E~~~~~~lEAma~G~PvI~s~~~~----~~~~i~~-~~~~~~~~-~-----~~~~~a~~i~~l~ 329 (358)
T cd03812 263 LLQAMDV--FLFPSLYEGLPLVLIEAQASGLPCILSDTIT----KEVDLTD-LVKFLSLD-E-----SPEIWAEEILKLK 329 (358)
T ss_pred HHHhcCE--EEecccccCCCHHHHHHHHhCCCEEEEcCCc----hhhhhcc-CccEEeCC-C-----CHHHHHHHHHHHH
Confidence 7877887 5532 33579999999999999855443 3444544 55554433 2 6799999999999
Q ss_pred cccchHHHHHHHHHHH
Q 011765 427 VEEKGQIYRDKAKEMK 442 (478)
Q Consensus 427 ~~~~~~~~~~~a~~~~ 442 (478)
+ |++.++++..-+
T Consensus 330 ~---~~~~~~~~~~~~ 342 (358)
T cd03812 330 S---EDRRERSSESIK 342 (358)
T ss_pred h---Ccchhhhhhhhh
Confidence 9 666665554433
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). |
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.92 E-value=1.5e-06 Score=85.41 Aligned_cols=155 Identities=12% Similarity=0.163 Sum_probs=83.5
Q ss_pred EEEeCcccCCCHHHHHHHHHHHHhCC--CCEEEEEecCCCCCCCCCCCCChhhhhhc-CCCcEEEeccCChhh---hhcC
Q 011765 281 YVAFGSEAKPSQEELTEIALGLELSK--LPFFWVLKKRLGQADTEPIELPDGFEERT-RGRGVVYTSWAPQLA---ILAH 354 (478)
Q Consensus 281 ~vs~Gs~~~~~~~~~~~~~~al~~~~--~~~i~~~~~~~~~~~~~~~~~p~~~~~~~-~~~n~~~~~~vpq~~---vL~~ 354 (478)
++..|+... ...+..+++++++.. .+++++-.+. ....+-..+.++. ..+++.+..++++.+ .+..
T Consensus 196 i~~~G~~~~--~Kg~~~li~a~~~l~~~~~l~ivG~~~------~~~~~~~~~~~~~~~~~~V~~~g~~~~~~~~~~~~~ 267 (363)
T cd04955 196 YLLVGRIVP--ENNIDDLIEAFSKSNSGKKLVIVGNAD------HNTPYGKLLKEKAAADPRIIFVGPIYDQELLELLRY 267 (363)
T ss_pred EEEEecccc--cCCHHHHHHHHHhhccCceEEEEcCCC------CcchHHHHHHHHhCCCCcEEEccccChHHHHHHHHh
Confidence 456787663 334455566665544 4444332221 1111111122111 246899999999865 4555
Q ss_pred CCceeeeecc----Ch-hhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeeccCCCCcccHHHHHHHHHHHhccc
Q 011765 355 DSVGGFLTHA----GW-SSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLVEE 429 (478)
Q Consensus 355 ~~~~~~ItHg----G~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~ 429 (478)
+++ ++.+. |. +++.||+++|+|+|+...... ...+.. .|...+.. +. +.+++.++++
T Consensus 268 ad~--~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~~----~e~~~~--~g~~~~~~------~~--l~~~i~~l~~-- 329 (363)
T cd04955 268 AAL--FYLHGHSVGGTNPSLLEAMAYGCPVLASDNPFN----REVLGD--KAIYFKVG------DD--LASLLEELEA-- 329 (363)
T ss_pred CCE--EEeCCccCCCCChHHHHHHHcCCCEEEecCCcc----ceeecC--CeeEecCc------hH--HHHHHHHHHh--
Confidence 666 55432 33 589999999999998765421 122222 24444332 22 9999999999
Q ss_pred chHHHHHHHHHHHHHhc-ccCChHHHHHHHHHHH
Q 011765 430 KGQIYRDKAKEMKGLFG-DKGRHDRYVDNFLNYL 462 (478)
Q Consensus 430 ~~~~~~~~a~~~~~~~~-~~~~~~~~~~~i~~~~ 462 (478)
+++.++++.+-+.... +.-+-+..++.+++.+
T Consensus 330 -~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y 362 (363)
T cd04955 330 -DPEEVSAMAKAARERIREKYTWEKIADQYEELY 362 (363)
T ss_pred -CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 6655554444333332 2233455556665543
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.92 E-value=1.6e-06 Score=83.03 Aligned_cols=318 Identities=16% Similarity=0.155 Sum_probs=179.6
Q ss_pred EEecCCCccCHHHHHHHHHHHHhC--CCeEEEEe-CCCccccCCCCCCCCCCCeEEEEecCCCCCCCCCCccccCCCChh
Q 011765 10 AMFPWLAFGHMIPWLELAKLIAQK--GHKIFFIS-TPRNIDRLPRLPQNLASMIQFVKISLPHVDNLRENAEATIDLPYD 86 (478)
Q Consensus 10 l~~~~~~~gH~~p~l~La~~L~~r--Gh~Vt~~~-~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~~~~~~~~ 86 (478)
+.+=--+.|-++-...|.++|.++ ++.|++-+ ++...+.+.+.- .+.+...-+|. |.+
T Consensus 52 vWiHaaSVGEv~a~~pLv~~l~~~~P~~~ilvTt~T~Tg~e~a~~~~---~~~v~h~YlP~--------------D~~-- 112 (419)
T COG1519 52 VWIHAASVGEVLAALPLVRALRERFPDLRILVTTMTPTGAERAAALF---GDSVIHQYLPL--------------DLP-- 112 (419)
T ss_pred EEEEecchhHHHHHHHHHHHHHHhCCCCCEEEEecCccHHHHHHHHc---CCCeEEEecCc--------------Cch--
Confidence 333344679999999999999999 88888877 555555554432 12244444441 111
Q ss_pred HHHHHHHHHhhhhHHHHHHHhhcCCCEEEEcC--CcccHHHHHHHhCCCeEEEecchHHHHHhhccccccccccCCCCCC
Q 011765 87 EVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDF--AAYWLPARARELGIPSGFFSIFTAATLGYFGPSSVLINDSGDHLKT 164 (478)
Q Consensus 87 ~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~--~~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (478)
......++.++||++|.-- +.+..+.-+++.|+|.+.+..-
T Consensus 113 -------------~~v~rFl~~~~P~l~Ii~EtElWPnli~e~~~~~~p~~LvNaR------------------------ 155 (419)
T COG1519 113 -------------IAVRRFLRKWRPKLLIIMETELWPNLINELKRRGIPLVLVNAR------------------------ 155 (419)
T ss_pred -------------HHHHHHHHhcCCCEEEEEeccccHHHHHHHHHcCCCEEEEeee------------------------
Confidence 1445566788999887543 3334556788999999987330
Q ss_pred CCcccCCCcccccccccccchhhhhhhhhhhcCCcccchhhhh-hhccccCCcEEEEcCcCccChHHHHHHHhhcCCCee
Q 011765 165 PEDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYR-FGQSLKGCDIVAVRSCMEFEPEWLKLLEQLHRKPVI 243 (478)
Q Consensus 165 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~ns~~~le~~~~~~~~~~~~~~~~ 243 (478)
+..+..+ .+..... ....+.+.++++.++-. -.+....---+++.
T Consensus 156 ------------------LS~rS~~-----------~y~k~~~~~~~~~~~i~li~aQse~-----D~~Rf~~LGa~~v~ 201 (419)
T COG1519 156 ------------------LSDRSFA-----------RYAKLKFLARLLFKNIDLILAQSEE-----DAQRFRSLGAKPVV 201 (419)
T ss_pred ------------------echhhhH-----------HHHHHHHHHHHHHHhcceeeecCHH-----HHHHHHhcCCcceE
Confidence 0000001 1111111 11223455777776622 12222332234477
Q ss_pred eeccCCCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccCCCHHHHHHHHHHHHhCC--CCEEEEEecCCCCCC
Q 011765 244 PVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELSK--LPFFWVLKKRLGQAD 321 (478)
Q Consensus 244 ~vGp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~--~~~i~~~~~~~~~~~ 321 (478)
.+|-+-...... ..+..+...|-..-+....+.|..+|... ..+.+-....++.+.. ...||+=+..
T Consensus 202 v~GNlKfd~~~~-----~~~~~~~~~~r~~l~~~r~v~iaaSTH~G-Eeei~l~~~~~l~~~~~~~llIlVPRHp----- 270 (419)
T COG1519 202 VTGNLKFDIEPP-----PQLAAELAALRRQLGGHRPVWVAASTHEG-EEEIILDAHQALKKQFPNLLLILVPRHP----- 270 (419)
T ss_pred EecceeecCCCC-----hhhHHHHHHHHHhcCCCCceEEEecCCCc-hHHHHHHHHHHHHhhCCCceEEEecCCh-----
Confidence 777665543321 12222233333333321255666666442 4455666666665433 4455653321
Q ss_pred CCCCCCCh--hhhhhc--------------CCCcEEEeccCChhh-hhcCCCceee-----eeccChhhHHHHHHhCCcE
Q 011765 322 TEPIELPD--GFEERT--------------RGRGVVYTSWAPQLA-ILAHDSVGGF-----LTHAGWSSVVEALQFGMPL 379 (478)
Q Consensus 322 ~~~~~~p~--~~~~~~--------------~~~n~~~~~~vpq~~-vL~~~~~~~~-----ItHgG~~s~~eal~~GvP~ 379 (478)
+.+++ +..++. ...++++.|-+--+- .++-+++ +| +-+||+| ..|++++|+|+
T Consensus 271 ---ERf~~v~~l~~~~gl~~~~rS~~~~~~~~tdV~l~DtmGEL~l~y~~adi-AFVGGSlv~~GGHN-~LEpa~~~~pv 345 (419)
T COG1519 271 ---ERFKAVENLLKRKGLSVTRRSQGDPPFSDTDVLLGDTMGELGLLYGIADI-AFVGGSLVPIGGHN-PLEPAAFGTPV 345 (419)
T ss_pred ---hhHHHHHHHHHHcCCeEEeecCCCCCCCCCcEEEEecHhHHHHHHhhccE-EEECCcccCCCCCC-hhhHHHcCCCE
Confidence 22211 000000 112455555444322 3333443 23 4699998 89999999999
Q ss_pred eccccccchhhHHHHHhhcCeEEEeeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHH
Q 011765 380 IVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGL 444 (478)
Q Consensus 380 l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~ 444 (478)
|.=|+...|.+.++++.+.|.|+.++ +.+.+.+++..+++ |++.++++.+-...
T Consensus 346 i~Gp~~~Nf~ei~~~l~~~ga~~~v~--------~~~~l~~~v~~l~~---~~~~r~~~~~~~~~ 399 (419)
T COG1519 346 IFGPYTFNFSDIAERLLQAGAGLQVE--------DADLLAKAVELLLA---DEDKREAYGRAGLE 399 (419)
T ss_pred EeCCccccHHHHHHHHHhcCCeEEEC--------CHHHHHHHHHHhcC---CHHHHHHHHHHHHH
Confidence 99999999999999999999999995 45778888888888 66666655443333
|
|
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.86 E-value=7.6e-07 Score=87.25 Aligned_cols=104 Identities=13% Similarity=0.166 Sum_probs=67.3
Q ss_pred CCcEEEeccCChh---hhhcCCCceeeeec----cChhhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeeccCC
Q 011765 337 GRGVVYTSWAPQL---AILAHDSVGGFLTH----AGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEG 409 (478)
Q Consensus 337 ~~n~~~~~~vpq~---~vL~~~~~~~~ItH----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~ 409 (478)
.+++.+..++|+. +++..+++ +|.- |..+++.||+++|+|+|+..... ....+. ..|..+..
T Consensus 252 ~~~v~~~g~~~~~~~~~~~~~~d~--~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~----~~e~~~--~~~~~~~~--- 320 (365)
T cd03809 252 GDRVRFLGYVSDEELAALYRGARA--FVFPSLYEGFGLPVLEAMACGTPVIASNISS----LPEVAG--DAALYFDP--- 320 (365)
T ss_pred CCeEEECCCCChhHHHHHHhhhhh--hcccchhccCCCCHHHHhcCCCcEEecCCCC----ccceec--CceeeeCC---
Confidence 4588888999875 46677777 5422 23468999999999999965422 111222 23444544
Q ss_pred CCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhcccCChHHHHHH
Q 011765 410 DGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDN 457 (478)
Q Consensus 410 ~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~ 457 (478)
-+.+++.++|.++++ |++.+.++.+-+....+.-.-++.++.
T Consensus 321 ---~~~~~~~~~i~~l~~---~~~~~~~~~~~~~~~~~~~sw~~~~~~ 362 (365)
T cd03809 321 ---LDPEALAAAIERLLE---DPALREELRERGLARAKRFSWEKTARR 362 (365)
T ss_pred ---CCHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 278999999999999 777777766655444333333334333
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. |
| >TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=98.85 E-value=6.8e-07 Score=89.23 Aligned_cols=110 Identities=17% Similarity=0.125 Sum_probs=73.2
Q ss_pred CCCcEEEeccCCh-hhhhcCCCceeee--ec--cCh-hhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeeccCC
Q 011765 336 RGRGVVYTSWAPQ-LAILAHDSVGGFL--TH--AGW-SSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEG 409 (478)
Q Consensus 336 ~~~n~~~~~~vpq-~~vL~~~~~~~~I--tH--gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~ 409 (478)
..+++.+..++++ ..++..+++ +| ++ .|. +.+.||+++|+|+|+.+...+.. ....|.|..+. .
T Consensus 278 ~~~~V~~~G~v~~~~~~~~~adv--~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~~i-----~~~~~~g~lv~--~- 347 (397)
T TIGR03087 278 ALPGVTVTGSVADVRPYLAHAAV--AVAPLRIARGIQNKVLEAMAMAKPVVASPEAAEGI-----DALPGAELLVA--A- 347 (397)
T ss_pred cCCCeEEeeecCCHHHHHHhCCE--EEecccccCCcccHHHHHHHcCCCEEecCcccccc-----cccCCcceEeC--C-
Confidence 3467888889986 447788888 65 33 455 47999999999999987643321 12346676664 3
Q ss_pred CCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhc-ccCChHHHHHHHHHHH
Q 011765 410 DGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFG-DKGRHDRYVDNFLNYL 462 (478)
Q Consensus 410 ~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~i~~~~ 462 (478)
+.++++++|.++++ |++.++++.+-+.... +.-+-++.++.+++.+
T Consensus 348 ----~~~~la~ai~~ll~---~~~~~~~~~~~ar~~v~~~fsw~~~~~~~~~~l 394 (397)
T TIGR03087 348 ----DPADFAAAILALLA---NPAEREELGQAARRRVLQHYHWPRNLARLDALL 394 (397)
T ss_pred ----CHHHHHHHHHHHHc---CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 88999999999999 7766555544443332 3333455556665554
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >PLN02846 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=98.82 E-value=4.7e-06 Score=83.17 Aligned_cols=102 Identities=15% Similarity=0.152 Sum_probs=64.7
Q ss_pred EeccCChhhhhcCCCceeeeec----cChhhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeeccCCCCcccHHH
Q 011765 342 YTSWAPQLAILAHDSVGGFLTH----AGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNS 417 (478)
Q Consensus 342 ~~~~vpq~~vL~~~~~~~~ItH----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~~~~~~~~~ 417 (478)
+..+.+..+++..+++ ||.- +=-+++.||+++|+|+|+.-... + ..+.+-+-|... + +.++
T Consensus 288 f~G~~~~~~~~~~~Dv--Fv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~----~-~~v~~~~ng~~~---~-----~~~~ 352 (462)
T PLN02846 288 YPGRDHADPLFHDYKV--FLNPSTTDVVCTTTAEALAMGKIVVCANHPS----N-EFFKQFPNCRTY---D-----DGKG 352 (462)
T ss_pred ECCCCCHHHHHHhCCE--EEECCCcccchHHHHHHHHcCCcEEEecCCC----c-ceeecCCceEec---C-----CHHH
Confidence 4455566678888887 8854 33479999999999999965442 2 333333344333 2 6789
Q ss_pred HHHHHHHHhcccchHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHhcc
Q 011765 418 VAESLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLKNHR 466 (478)
Q Consensus 418 l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 466 (478)
+.+++.++|.++. +..+.+ .+..-+-+.+++.+++.++..+
T Consensus 353 ~a~ai~~~l~~~~-~~~~~~-------a~~~~SWe~~~~~l~~~~~~~~ 393 (462)
T PLN02846 353 FVRATLKALAEEP-APLTDA-------QRHELSWEAATERFLRVADLDL 393 (462)
T ss_pred HHHHHHHHHccCc-hhHHHH-------HHHhCCHHHHHHHHHHHhccCC
Confidence 9999999998311 122111 1124445677888888776444
|
|
| >PLN02275 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=98.80 E-value=1e-05 Score=79.85 Aligned_cols=75 Identities=19% Similarity=0.326 Sum_probs=53.3
Q ss_pred CcEEEec-cCChhhh---hcCCCceeeee-c-----cC-hhhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeec
Q 011765 338 RGVVYTS-WAPQLAI---LAHDSVGGFLT-H-----AG-WSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPR 406 (478)
Q Consensus 338 ~n~~~~~-~vpq~~v---L~~~~~~~~It-H-----gG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~ 406 (478)
+|+.+.. |+|..++ ++.+++ +|. + -| -+++.||+++|+|+|+... ..+...+++-+.|...+
T Consensus 286 ~~v~~~~~~~~~~~~~~~l~~aDv--~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~----gg~~eiv~~g~~G~lv~- 358 (371)
T PLN02275 286 RHVAFRTMWLEAEDYPLLLGSADL--GVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSY----SCIGELVKDGKNGLLFS- 358 (371)
T ss_pred CceEEEcCCCCHHHHHHHHHhCCE--EEEeccccccccccHHHHHHHHCCCCEEEecC----CChHHHccCCCCeEEEC-
Confidence 4666655 7887554 778888 663 1 12 3589999999999999643 34666676767898874
Q ss_pred cCCCCcccHHHHHHHHHHHh
Q 011765 407 DEGDGFFTRNSVAESLRLVL 426 (478)
Q Consensus 407 ~~~~~~~~~~~l~~~i~~ll 426 (478)
+.++++++|.++|
T Consensus 359 -------~~~~la~~i~~l~ 371 (371)
T PLN02275 359 -------SSSELADQLLELL 371 (371)
T ss_pred -------CHHHHHHHHHHhC
Confidence 4678888888775
|
|
| >TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing | Back alignment and domain information |
|---|
Probab=98.75 E-value=3.7e-07 Score=89.53 Aligned_cols=141 Identities=16% Similarity=0.190 Sum_probs=82.9
Q ss_pred HhhhcccCCCCceEEEEeCccc--C-CCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCCCCChhhhhhcC-CCcEEE
Q 011765 267 IKEWLDEQEKGSVVYVAFGSEA--K-PSQEELTEIALGLELSKLPFFWVLKKRLGQADTEPIELPDGFEERTR-GRGVVY 342 (478)
Q Consensus 267 ~~~~l~~~~~~~~v~vs~Gs~~--~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~-~~n~~~ 342 (478)
+.+.+.-.++++.|+|++=... + ...+.+..+++++...+.++++++...+. ....+-+.+.+-.. .+++.+
T Consensus 191 ~~~~lgl~~~~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~~~~~~vi~P~~~p----~~~~i~~~i~~~~~~~~~v~l 266 (365)
T TIGR03568 191 LEEKLGIDLDKPYALVTFHPVTLEKESAEEQIKELLKALDELNKNYIFTYPNADA----GSRIINEAIEEYVNEHPNFRL 266 (365)
T ss_pred HHHHhCCCCCCCEEEEEeCCCcccccCchHHHHHHHHHHHHhccCCEEEEeCCCC----CchHHHHHHHHHhcCCCCEEE
Confidence 4333332223468888875433 3 34578999999998877666666532211 01111111111111 357877
Q ss_pred eccCCh---hhhhcCCCceeeeeccChhhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeeccCCCCcccHHHHH
Q 011765 343 TSWAPQ---LAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVA 419 (478)
Q Consensus 343 ~~~vpq---~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~~~~~~~~~l~ 419 (478)
.+-++. ..++.++++ +||-.+.+- .||.+.|+|+|.+-- -| ...+.|..+. ... .++++|.
T Consensus 267 ~~~l~~~~~l~Ll~~a~~--vitdSSggi-~EA~~lg~Pvv~l~~--R~-----e~~~~g~nvl-~vg-----~~~~~I~ 330 (365)
T TIGR03568 267 FKSLGQERYLSLLKNADA--VIGNSSSGI-IEAPSFGVPTINIGT--RQ-----KGRLRADSVI-DVD-----PDKEEIV 330 (365)
T ss_pred ECCCChHHHHHHHHhCCE--EEEcChhHH-HhhhhcCCCEEeecC--Cc-----hhhhhcCeEE-EeC-----CCHHHHH
Confidence 765544 567788888 998875544 999999999997741 11 1112333322 223 4889999
Q ss_pred HHHHHHhc
Q 011765 420 ESLRLVLV 427 (478)
Q Consensus 420 ~~i~~ll~ 427 (478)
+++.++++
T Consensus 331 ~a~~~~~~ 338 (365)
T TIGR03568 331 KAIEKLLD 338 (365)
T ss_pred HHHHHHhC
Confidence 99999655
|
This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate. |
| >PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
Probab=98.74 E-value=1.5e-05 Score=79.60 Aligned_cols=113 Identities=16% Similarity=0.172 Sum_probs=72.9
Q ss_pred CCcEEEeccCChhh---hhcCCCceeeee--c-------cCh-hhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEE
Q 011765 337 GRGVVYTSWAPQLA---ILAHDSVGGFLT--H-------AGW-SSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVEL 403 (478)
Q Consensus 337 ~~n~~~~~~vpq~~---vL~~~~~~~~It--H-------gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~ 403 (478)
.+++.+..|+|+.+ ++..+++ ||. + =|. ++++||+++|+|+|+.... .....+++-..|..
T Consensus 278 ~~~V~~~G~~~~~el~~~l~~aDv--~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~----g~~E~v~~~~~G~l 351 (406)
T PRK15427 278 EDVVEMPGFKPSHEVKAMLDDADV--FLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHS----GIPELVEADKSGWL 351 (406)
T ss_pred CCeEEEeCCCCHHHHHHHHHhCCE--EEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCC----CchhhhcCCCceEE
Confidence 35788889999855 5667777 663 2 244 6799999999999996543 34445555567887
Q ss_pred eeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHH-HHhcccCChHHHHHHHHHHHH
Q 011765 404 IPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMK-GLFGDKGRHDRYVDNFLNYLK 463 (478)
Q Consensus 404 l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~-~~~~~~~~~~~~~~~i~~~~~ 463 (478)
.+.. +.++++++|.++++. |++.++++.+-+ +...+.=..+..++.+.+.++
T Consensus 352 v~~~------d~~~la~ai~~l~~~--d~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~ 404 (406)
T PRK15427 352 VPEN------DAQALAQRLAAFSQL--DTDELAPVVKRAREKVETDFNQQVINRELASLLQ 404 (406)
T ss_pred eCCC------CHHHHHHHHHHHHhC--CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 7654 789999999999972 233333332222 223333334556666666554
|
|
| >PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=98.73 E-value=1.2e-05 Score=81.53 Aligned_cols=207 Identities=16% Similarity=0.104 Sum_probs=110.1
Q ss_pred ccChHHHHHHHhhcCCCeeeec-cCCCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccCCCHHHHHHHHHHHH
Q 011765 225 EFEPEWLKLLEQLHRKPVIPVG-QLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLE 303 (478)
Q Consensus 225 ~le~~~~~~~~~~~~~~~~~vG-p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~ 303 (478)
-+|.+++. ..+-++.||| |+...... ..+.++.++-+.-.+++++|-+--||-.+.=...+..+.++.+
T Consensus 370 PFE~~~y~----~~gv~v~yVGHPL~d~i~~------~~~~~~~r~~lgl~~~~~iIaLLPGSR~~EI~rllPv~l~aa~ 439 (608)
T PRK01021 370 PFEQNLFK----DSPLRTVYLGHPLVETISS------FSPNLSWKEQLHLPSDKPIVAAFPGSRRGDILRNLTIQVQAFL 439 (608)
T ss_pred ccCHHHHH----hcCCCeEEECCcHHhhccc------CCCHHHHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHH
Confidence 35555443 2455799999 99865331 2223344444444456678989899865322344444666665
Q ss_pred --hC--CCCEEEEEecCCCCCCCCCCCCChhhhhhcCCCc---EEEeccCChhhhhcCCCceeeeeccChhhHHHHHHhC
Q 011765 304 --LS--KLPFFWVLKKRLGQADTEPIELPDGFEERTRGRG---VVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFG 376 (478)
Q Consensus 304 --~~--~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~n---~~~~~~vpq~~vL~~~~~~~~ItHgG~~s~~eal~~G 376 (478)
.. +.+|+...... ...+.+.+.....+ +.+..--...++++.|++ .+.-.|- .+.|+..+|
T Consensus 440 ~~~l~~~l~fvvp~a~~---------~~~~~i~~~~~~~~~~~~~ii~~~~~~~~m~aaD~--aLaaSGT-aTLEaAL~g 507 (608)
T PRK01021 440 ASSLASTHQLLVSSANP---------KYDHLILEVLQQEGCLHSHIVPSQFRYELMRECDC--ALAKCGT-IVLETALNQ 507 (608)
T ss_pred HHHhccCeEEEEecCch---------hhHHHHHHHHhhcCCCCeEEecCcchHHHHHhcCe--eeecCCH-HHHHHHHhC
Confidence 33 33444432211 11111222121111 122110012578888887 7777665 478999999
Q ss_pred CcEeccc-cccchhhHHHHHhhc--------------CeEEEee--ccCCCCcccHHHHHHHHHHHhcc-cchHHHHHHH
Q 011765 377 MPLIVLT-CYADQGLNAKLLEEK--------------QIVELIP--RDEGDGFFTRNSVAESLRLVLVE-EKGQIYRDKA 438 (478)
Q Consensus 377 vP~l~~P-~~~DQ~~na~~v~~~--------------g~G~~l~--~~~~~~~~~~~~l~~~i~~ll~~-~~~~~~~~~a 438 (478)
+|||++= ...=-+..|+++.+. .+-..+- ..+ +|++.|++++ ++|.+ +..++.++..
T Consensus 508 ~PmVV~YK~s~Lty~Iak~Lvki~i~yIsLpNIIagr~VvPEllqgQ~~----~tpe~La~~l-~lL~d~~~r~~~~~~l 582 (608)
T PRK01021 508 TPTIVTCQLRPFDTFLAKYIFKIILPAYSLPNIILGSTIFPEFIGGKKD----FQPEEVAAAL-DILKTSQSKEKQKDAC 582 (608)
T ss_pred CCEEEEEecCHHHHHHHHHHHhccCCeeehhHHhcCCCcchhhcCCccc----CCHHHHHHHH-HHhcCHHHHHHHHHHH
Confidence 9998743 333445566776651 1111111 123 7999999997 77762 1224566677
Q ss_pred HHHHHHhcccCCh-HHHHHHH
Q 011765 439 KEMKGLFGDKGRH-DRYVDNF 458 (478)
Q Consensus 439 ~~~~~~~~~~~~~-~~~~~~i 458 (478)
+++++.+.++..+ +.++..+
T Consensus 583 ~~lr~~Lg~~~~~~~~~~~~~ 603 (608)
T PRK01021 583 RDLYQAMNESASTMKECLSLI 603 (608)
T ss_pred HHHHHHhcCCCCCHHHHHHHH
Confidence 7777777543333 3344433
|
|
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Probab=98.72 E-value=1.1e-05 Score=79.73 Aligned_cols=110 Identities=18% Similarity=0.131 Sum_probs=69.9
Q ss_pred CcEEEeccC--Ch---hhhhcCCCceeeeecc---C-hhhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeeccC
Q 011765 338 RGVVYTSWA--PQ---LAILAHDSVGGFLTHA---G-WSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDE 408 (478)
Q Consensus 338 ~n~~~~~~v--pq---~~vL~~~~~~~~ItHg---G-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~ 408 (478)
+++.+..+. ++ .++++.+++ |+.-. | -.++.||+++|+|+|+.... .....+.....|...+
T Consensus 252 ~~v~~~~~~~~~~~~~~~~~~~ad~--~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~----~~~~~i~~~~~g~~~~--- 322 (372)
T cd03792 252 PDIHVLTLPPVSDLEVNALQRASTV--VLQKSIREGFGLTVTEALWKGKPVIAGPVG----GIPLQIEDGETGFLVD--- 322 (372)
T ss_pred CCeEEEecCCCCHHHHHHHHHhCeE--EEeCCCccCCCHHHHHHHHcCCCEEEcCCC----CchhhcccCCceEEeC---
Confidence 467776665 43 246677777 77432 2 35999999999999996543 3334455556676543
Q ss_pred CCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHh-cccCChHHHHHHHHHHHHh
Q 011765 409 GDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLF-GDKGRHDRYVDNFLNYLKN 464 (478)
Q Consensus 409 ~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~-~~~~~~~~~~~~i~~~~~~ 464 (478)
+.+.++.+|.++++ +++.++++.+-+... .+.-.-+..++.+++.+++
T Consensus 323 -----~~~~~a~~i~~ll~---~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 371 (372)
T cd03792 323 -----TVEEAAVRILYLLR---DPELRRKMGANAREHVRENFLITRHLKDYLYLISK 371 (372)
T ss_pred -----CcHHHHHHHHHHHc---CHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 34567789999998 677666655544443 3333445666777766643
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. |
| >TIGR02470 sucr_synth sucrose synthase | Back alignment and domain information |
|---|
Probab=98.68 E-value=7.7e-05 Score=78.71 Aligned_cols=91 Identities=14% Similarity=0.149 Sum_probs=58.1
Q ss_pred CcEEEeccC-Ch---hhhhcC-CC-ceeeee---ccCh-hhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeecc
Q 011765 338 RGVVYTSWA-PQ---LAILAH-DS-VGGFLT---HAGW-SSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRD 407 (478)
Q Consensus 338 ~n~~~~~~v-pq---~~vL~~-~~-~~~~It---HgG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~ 407 (478)
+++.+..+. +. .++..+ ++ .++||. .=|. .++.||+++|+|+|+... ...+..|.+-.-|..++..
T Consensus 619 g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~----GG~~EiV~dg~tGfLVdp~ 694 (784)
T TIGR02470 619 GQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRF----GGPLEIIQDGVSGFHIDPY 694 (784)
T ss_pred CeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCC----CCHHHHhcCCCcEEEeCCC
Confidence 456666654 32 234432 22 223773 2233 589999999999999544 4456666666678888774
Q ss_pred CCCCcccHHHHHHHHHHHh----cccchHHHHHHHHHH
Q 011765 408 EGDGFFTRNSVAESLRLVL----VEEKGQIYRDKAKEM 441 (478)
Q Consensus 408 ~~~~~~~~~~l~~~i~~ll----~~~~~~~~~~~a~~~ 441 (478)
+++.++++|.+++ . |++.++++.+-
T Consensus 695 ------D~eaLA~aL~~ll~kll~---dp~~~~~ms~~ 723 (784)
T TIGR02470 695 ------HGEEAAEKIVDFFEKCDE---DPSYWQKISQG 723 (784)
T ss_pred ------CHHHHHHHHHHHHHHhcC---CHHHHHHHHHH
Confidence 7788999998876 4 56665554443
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria. |
| >PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.67 E-value=7.9e-05 Score=73.86 Aligned_cols=113 Identities=14% Similarity=0.127 Sum_probs=76.5
Q ss_pred CcEEEeccCChhh---hhcCCCceeeeec----cCh-hhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeeccCC
Q 011765 338 RGVVYTSWAPQLA---ILAHDSVGGFLTH----AGW-SSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEG 409 (478)
Q Consensus 338 ~n~~~~~~vpq~~---vL~~~~~~~~ItH----gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~ 409 (478)
.++.+..++|+.+ +++.+++ +|.- -|. .++.||+++|+|+|+.... .+...+++...|..+...
T Consensus 257 ~~v~~~G~~~~~~l~~~~~~aDv--~v~pS~~~E~f~~~~lEAma~G~PVI~s~~g----g~~Eiv~~~~~G~~l~~~-- 328 (380)
T PRK15484 257 DRCIMLGGQPPEKMHNYYPLADL--VVVPSQVEEAFCMVAVEAMAAGKPVLASTKG----GITEFVLEGITGYHLAEP-- 328 (380)
T ss_pred CcEEEeCCCCHHHHHHHHHhCCE--EEeCCCCccccccHHHHHHHcCCCEEEeCCC----CcHhhcccCCceEEEeCC--
Confidence 4678888998644 5777888 6642 343 5789999999999996653 345556666678766443
Q ss_pred CCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHh
Q 011765 410 DGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLKN 464 (478)
Q Consensus 410 ~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~ 464 (478)
.+.++++++|.++++ |++.++..++-++...+.-.-+..++.+++.+++
T Consensus 329 ---~d~~~la~~I~~ll~---d~~~~~~~~~ar~~~~~~fsw~~~a~~~~~~l~~ 377 (380)
T PRK15484 329 ---MTSDSIISDINRTLA---DPELTQIAEQAKDFVFSKYSWEGVTQRFEEQIHN 377 (380)
T ss_pred ---CCHHHHHHHHHHHHc---CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 389999999999999 6665443333333333444456667777776654
|
|
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.66 E-value=3e-06 Score=83.06 Aligned_cols=137 Identities=12% Similarity=0.088 Sum_probs=88.4
Q ss_pred EEEEeCcccCCCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCCCCChhhhhhcCCCcEEEeccCChh---hhhcCCC
Q 011765 280 VYVAFGSEAKPSQEELTEIALGLELSKLPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQL---AILAHDS 356 (478)
Q Consensus 280 v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~n~~~~~~vpq~---~vL~~~~ 356 (478)
.++..|+.. ....+..+++++++.+.+++++-.+.. .+.+.+ ...+|+.+..++|+. ++++.++
T Consensus 197 ~il~~G~~~--~~K~~~~li~a~~~~~~~l~ivG~g~~----------~~~l~~-~~~~~V~~~g~~~~~~~~~~~~~ad 263 (351)
T cd03804 197 YYLSVGRLV--PYKRIDLAIEAFNKLGKRLVVIGDGPE----------LDRLRA-KAGPNVTFLGRVSDEELRDLYARAR 263 (351)
T ss_pred EEEEEEcCc--cccChHHHHHHHHHCCCcEEEEECChh----------HHHHHh-hcCCCEEEecCCCHHHHHHHHHhCC
Confidence 455677766 334466677777777777665543221 111222 235689999999984 4677888
Q ss_pred ceeeeeccCh-hhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeeccCCCCcccHHHHHHHHHHHhcccchH-HH
Q 011765 357 VGGFLTHAGW-SSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQ-IY 434 (478)
Q Consensus 357 ~~~~ItHgG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~-~~ 434 (478)
+-++-+.-|. .++.||+++|+|+|+....+ ....+++.+.|..++.. +.++++++|.++++ |+ ..
T Consensus 264 ~~v~ps~e~~g~~~~Eama~G~Pvi~~~~~~----~~e~i~~~~~G~~~~~~------~~~~la~~i~~l~~---~~~~~ 330 (351)
T cd03804 264 AFLFPAEEDFGIVPVEAMASGTPVIAYGKGG----ALETVIDGVTGILFEEQ------TVESLAAAVERFEK---NEDFD 330 (351)
T ss_pred EEEECCcCCCCchHHHHHHcCCCEEEeCCCC----CcceeeCCCCEEEeCCC------CHHHHHHHHHHHHh---CcccC
Confidence 8333344444 46789999999999976433 34445555788888764 78889999999999 55 34
Q ss_pred HHHHHHHH
Q 011765 435 RDKAKEMK 442 (478)
Q Consensus 435 ~~~a~~~~ 442 (478)
++++++.+
T Consensus 331 ~~~~~~~~ 338 (351)
T cd03804 331 PQAIRAHA 338 (351)
T ss_pred HHHHHHHH
Confidence 44444433
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. |
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=98.66 E-value=6e-05 Score=79.32 Aligned_cols=113 Identities=18% Similarity=0.197 Sum_probs=73.1
Q ss_pred CCcEEEeccCCh-hhhhcCCCceeeee---ccCh-hhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeeccCCCC
Q 011765 337 GRGVVYTSWAPQ-LAILAHDSVGGFLT---HAGW-SSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDG 411 (478)
Q Consensus 337 ~~n~~~~~~vpq-~~vL~~~~~~~~It---HgG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~~~ 411 (478)
.+++.+..|.++ ..++..+++ ||. +.|+ +++.||+++|+|+|+.... .....+.+-..|..++..+
T Consensus 573 ~~~V~flG~~~dv~~ll~aaDv--~VlpS~~Egfp~vlLEAMA~G~PVVat~~g----G~~EiV~dg~~GlLv~~~d--- 643 (694)
T PRK15179 573 GERILFTGLSRRVGYWLTQFNA--FLLLSRFEGLPNVLIEAQFSGVPVVTTLAG----GAGEAVQEGVTGLTLPADT--- 643 (694)
T ss_pred CCcEEEcCCcchHHHHHHhcCE--EEeccccccchHHHHHHHHcCCeEEEECCC----ChHHHccCCCCEEEeCCCC---
Confidence 357888888776 457777888 663 5564 7999999999999996643 3455565556798888765
Q ss_pred cccHHHHHHHHHHHhcc-cchHHHHHHHHHHHHHhcccCChHHHHHHHHHHH
Q 011765 412 FFTRNSVAESLRLVLVE-EKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYL 462 (478)
Q Consensus 412 ~~~~~~l~~~i~~ll~~-~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~ 462 (478)
.+.+++.+++.+++.. ..++.+++++++..+ +.-+.+..++.+++.+
T Consensus 644 -~~~~~La~aL~~ll~~l~~~~~l~~~ar~~a~---~~FS~~~~~~~~~~lY 691 (694)
T PRK15179 644 -VTAPDVAEALARIHDMCAADPGIARKAADWAS---ARFSLNQMIASTVRCY 691 (694)
T ss_pred -CChHHHHHHHHHHHhChhccHHHHHHHHHHHH---HhCCHHHHHHHHHHHh
Confidence 5666777777666541 115667766655442 2223344555555544
|
|
| >COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.65 E-value=6.4e-06 Score=78.12 Aligned_cols=212 Identities=17% Similarity=0.173 Sum_probs=119.5
Q ss_pred ccChHHHHHHHhhcCCCeeeec-cCCCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccCCCHHHHHHHHHHHH
Q 011765 225 EFEPEWLKLLEQLHRKPVIPVG-QLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLE 303 (478)
Q Consensus 225 ~le~~~~~~~~~~~~~~~~~vG-p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~ 303 (478)
-+|++.++. ++-+.+||| |+....+. ..+..+.++-+.-..+++++.+-.||-.+.-...+.-+.++..
T Consensus 145 PFE~~~y~k----~g~~~~yVGHpl~d~i~~------~~~r~~ar~~l~~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~ 214 (381)
T COG0763 145 PFEPAFYDK----FGLPCTYVGHPLADEIPL------LPDREAAREKLGIDADEKTLALLPGSRRSEIRRLLPPFVQAAQ 214 (381)
T ss_pred CCCHHHHHh----cCCCeEEeCChhhhhccc------cccHHHHHHHhCCCCCCCeEEEecCCcHHHHHHHHHHHHHHHH
Confidence 355554433 333489999 88866542 2334445555655556779999999866411222333444443
Q ss_pred h-----CCCCEEEEEecCCCCCCCCCCCCChhhhhhcCC-CcEEEeccCCh--hhhhcCCCceeeeeccChhhHHHHHHh
Q 011765 304 L-----SKLPFFWVLKKRLGQADTEPIELPDGFEERTRG-RGVVYTSWAPQ--LAILAHDSVGGFLTHAGWSSVVEALQF 375 (478)
Q Consensus 304 ~-----~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~-~n~~~~~~vpq--~~vL~~~~~~~~ItHgG~~s~~eal~~ 375 (478)
+ .+.+|+.-+.... ...+-....+.... -+.++ .++ .+++..|++ .+.-+|-. +.|+..+
T Consensus 215 ~l~~~~~~~~~vlp~~~~~------~~~~~~~~~~~~~~~~~~~~---~~~~~~~a~~~aD~--al~aSGT~-tLE~aL~ 282 (381)
T COG0763 215 ELKARYPDLKFVLPLVNAK------YRRIIEEALKWEVAGLSLIL---IDGEKRKAFAAADA--ALAASGTA-TLEAALA 282 (381)
T ss_pred HHHhhCCCceEEEecCcHH------HHHHHHHHhhccccCceEEe---cCchHHHHHHHhhH--HHHhccHH-HHHHHHh
Confidence 2 2345554433210 00000011100000 11222 222 336666776 66666654 6799999
Q ss_pred CCcEeccc-cccchhhHHHHHhhcCeEE------------EeeccCCCCcccHHHHHHHHHHHhccc-chHHHHHHHHHH
Q 011765 376 GMPLIVLT-CYADQGLNAKLLEEKQIVE------------LIPRDEGDGFFTRNSVAESLRLVLVEE-KGQIYRDKAKEM 441 (478)
Q Consensus 376 GvP~l~~P-~~~DQ~~na~~v~~~g~G~------------~l~~~~~~~~~~~~~l~~~i~~ll~~~-~~~~~~~~a~~~ 441 (478)
|+|||+.= ...=-+..|++.....-.- .+-..+ ++++.|.+++..++.++ +-+.+++....+
T Consensus 283 g~P~Vv~Yk~~~it~~iak~lvk~~yisLpNIi~~~~ivPEliq~~----~~pe~la~~l~~ll~~~~~~~~~~~~~~~l 358 (381)
T COG0763 283 GTPMVVAYKVKPITYFIAKRLVKLPYVSLPNILAGREIVPELIQED----CTPENLARALEELLLNGDRREALKEKFREL 358 (381)
T ss_pred CCCEEEEEeccHHHHHHHHHhccCCcccchHHhcCCccchHHHhhh----cCHHHHHHHHHHHhcChHhHHHHHHHHHHH
Confidence 99998753 2222344455544432211 111122 78999999999999943 114788888889
Q ss_pred HHHhcccCChHHHHHHHHHHH
Q 011765 442 KGLFGDKGRHDRYVDNFLNYL 462 (478)
Q Consensus 442 ~~~~~~~~~~~~~~~~i~~~~ 462 (478)
++.++..+.++.+++.+.+.+
T Consensus 359 ~~~l~~~~~~e~aA~~vl~~~ 379 (381)
T COG0763 359 HQYLREDPASEIAAQAVLELL 379 (381)
T ss_pred HHHHcCCcHHHHHHHHHHHHh
Confidence 999888778889999888865
|
|
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=98.63 E-value=2.5e-05 Score=79.60 Aligned_cols=170 Identities=12% Similarity=0.076 Sum_probs=86.4
Q ss_pred CceEEEEeCcccC-CCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCCCCChhhhhhc--CCCcEE-EeccCCh--hh
Q 011765 277 GSVVYVAFGSEAK-PSQEELTEIALGLELSKLPFFWVLKKRLGQADTEPIELPDGFEERT--RGRGVV-YTSWAPQ--LA 350 (478)
Q Consensus 277 ~~~v~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~--~~~n~~-~~~~vpq--~~ 350 (478)
+.++++..|.... ...+.+.+.+..+.+.+.+++++-.+. ...-+.+.+.. ...++. ...|-.. ..
T Consensus 281 ~~~~i~~vGRl~~~KG~~~li~a~~~l~~~~~~lvivG~g~--------~~~~~~l~~l~~~~~~~v~~~~g~~~~~~~~ 352 (466)
T PRK00654 281 DAPLFAMVSRLTEQKGLDLVLEALPELLEQGGQLVLLGTGD--------PELEEAFRALAARYPGKVGVQIGYDEALAHR 352 (466)
T ss_pred CCcEEEEeeccccccChHHHHHHHHHHHhcCCEEEEEecCc--------HHHHHHHHHHHHHCCCcEEEEEeCCHHHHHH
Confidence 3466777787663 223333333333333356666553221 11111121111 123443 3345322 24
Q ss_pred hhcCCCceeeee---ccCh-hhHHHHHHhCCcEecccccc--chhhHHHHHhhcCeEEEeeccCCCCcccHHHHHHHHHH
Q 011765 351 ILAHDSVGGFLT---HAGW-SSVVEALQFGMPLIVLTCYA--DQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRL 424 (478)
Q Consensus 351 vL~~~~~~~~It---HgG~-~s~~eal~~GvP~l~~P~~~--DQ~~na~~v~~~g~G~~l~~~~~~~~~~~~~l~~~i~~ 424 (478)
+++.+++ +|. +-|. .+.+||+++|+|+|+....+ |.-.+...-.+.+.|..++.. ++++|.++|.+
T Consensus 353 ~~~~aDv--~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv~~~------d~~~la~~i~~ 424 (466)
T PRK00654 353 IYAGADM--FLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGEATGFVFDDF------NAEDLLRALRR 424 (466)
T ss_pred HHhhCCE--EEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCCCceEEeCCC------CHHHHHHHHHH
Confidence 6777887 663 3344 48999999999999865432 211110000223678887764 78999999999
Q ss_pred HhcccchHHHHHHHHHHHHHh-cccCChHHHHHHHHHHHHhc
Q 011765 425 VLVEEKGQIYRDKAKEMKGLF-GDKGRHDRYVDNFLNYLKNH 465 (478)
Q Consensus 425 ll~~~~~~~~~~~a~~~~~~~-~~~~~~~~~~~~i~~~~~~~ 465 (478)
+++...++..++ ++++.. .+.-+-++.++..++.+++.
T Consensus 425 ~l~~~~~~~~~~---~~~~~~~~~~fsw~~~a~~~~~lY~~~ 463 (466)
T PRK00654 425 ALELYRQPPLWR---ALQRQAMAQDFSWDKSAEEYLELYRRL 463 (466)
T ss_pred HHHHhcCHHHHH---HHHHHHhccCCChHHHHHHHHHHHHHH
Confidence 886111222222 232322 23334466777777766543
|
|
| >KOG3349 consensus Predicted glycosyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.59 E-value=3.8e-07 Score=73.66 Aligned_cols=121 Identities=20% Similarity=0.230 Sum_probs=82.4
Q ss_pred ceEEEEeCcccCCC---HHHHHHHHHHHHhCCCC-EEEEEecCCCCCCCCCCCCChhhh--hhcCCCcEEEeccCCh-hh
Q 011765 278 SVVYVAFGSEAKPS---QEELTEIALGLELSKLP-FFWVLKKRLGQADTEPIELPDGFE--ERTRGRGVVYTSWAPQ-LA 350 (478)
Q Consensus 278 ~~v~vs~Gs~~~~~---~~~~~~~~~al~~~~~~-~i~~~~~~~~~~~~~~~~~p~~~~--~~~~~~n~~~~~~vpq-~~ 350 (478)
..+||+-||....+ .-.-...++.|.+.|.. .++.++.+.. -.++... .+...-.+...+|.|- .+
T Consensus 4 ~~vFVTVGtT~Fd~LI~~Vl~~~~~~~L~k~G~~kLiiQ~Grg~~-------~~~d~~~~~~k~~gl~id~y~f~psl~e 76 (170)
T KOG3349|consen 4 MTVFVTVGTTSFDDLISCVLSEEFLQELQKRGFTKLIIQIGRGQP-------FFGDPIDLIRKNGGLTIDGYDFSPSLTE 76 (170)
T ss_pred eEEEEEeccccHHHHHHHHcCHHHHHHHHHcCccEEEEEecCCcc-------CCCCHHHhhcccCCeEEEEEecCccHHH
Confidence 38999999987311 12233467777888864 5666665411 1122111 1112223556778887 55
Q ss_pred hhcCCCceeeeeccChhhHHHHHHhCCcEecccc----ccchhhHHHHHhhcCeEEEeecc
Q 011765 351 ILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTC----YADQGLNAKLLEEKQIVELIPRD 407 (478)
Q Consensus 351 vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~----~~DQ~~na~~v~~~g~G~~l~~~ 407 (478)
..+.+++ +|+|+|.||++|.|..|+|.|+++- ...|-.-|..+.+.|-=..=...
T Consensus 77 ~I~~Adl--VIsHAGaGS~letL~l~KPlivVvNd~LMDNHQ~ELA~qL~~egyL~~C~ps 135 (170)
T KOG3349|consen 77 DIRSADL--VISHAGAGSCLETLRLGKPLIVVVNDSLMDNHQLELAKQLAEEGYLYYCTPS 135 (170)
T ss_pred HHhhccE--EEecCCcchHHHHHHcCCCEEEEeChHhhhhHHHHHHHHHHhcCcEEEeecc
Confidence 6666777 9999999999999999999999993 57999999999998865554443
|
|
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.53 E-value=9.1e-05 Score=75.88 Aligned_cols=167 Identities=13% Similarity=0.038 Sum_probs=85.3
Q ss_pred CceEEEEeCcccC-CCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCCCCChhhhhhcC--CCcEEEeccCChh---h
Q 011765 277 GSVVYVAFGSEAK-PSQEELTEIALGLELSKLPFFWVLKKRLGQADTEPIELPDGFEERTR--GRGVVYTSWAPQL---A 350 (478)
Q Consensus 277 ~~~v~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~--~~n~~~~~~vpq~---~ 350 (478)
+..+++..|.... ...+.+.+.++.+.+.+.+++++-.+. ..+-+.+.+..+ .+++.+....++. .
T Consensus 295 ~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~G~g~--------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 366 (476)
T cd03791 295 DAPLFGFVGRLTEQKGIDLLLEALPELLELGGQLVILGSGD--------PEYEEALRELAARYPGRVAVLIGYDEALAHL 366 (476)
T ss_pred CCCEEEEEeeccccccHHHHHHHHHHHHHcCcEEEEEecCC--------HHHHHHHHHHHHhCCCcEEEEEeCCHHHHHH
Confidence 3466777787764 223444444444444455555543321 111111111111 3466543333332 3
Q ss_pred hhcCCCceeeeec---cCh-hhHHHHHHhCCcEecccccc--chhhHHHHHhhcCeEEEeeccCCCCcccHHHHHHHHHH
Q 011765 351 ILAHDSVGGFLTH---AGW-SSVVEALQFGMPLIVLTCYA--DQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRL 424 (478)
Q Consensus 351 vL~~~~~~~~ItH---gG~-~s~~eal~~GvP~l~~P~~~--DQ~~na~~v~~~g~G~~l~~~~~~~~~~~~~l~~~i~~ 424 (478)
+++.+++ ++.- -|. .+.+||+++|+|+|+....+ |.-.+...-.+.|.|..++.. +.+++.+++.+
T Consensus 367 ~~~~aDv--~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~------~~~~l~~~i~~ 438 (476)
T cd03791 367 IYAGADF--FLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGEGTGFVFEGY------NADALLAALRR 438 (476)
T ss_pred HHHhCCE--EECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCCCCeEEeCCC------CHHHHHHHHHH
Confidence 5677777 6632 122 47899999999999866532 211111111133578888764 78999999999
Q ss_pred HhcccchHHHHHHHHHHHHHhcccCCh-HHHHHHHHHHH
Q 011765 425 VLVEEKGQIYRDKAKEMKGLFGDKGRH-DRYVDNFLNYL 462 (478)
Q Consensus 425 ll~~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~i~~~~ 462 (478)
+++ ...-++...++++.......+ ++.++..++.+
T Consensus 439 ~l~---~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~y 474 (476)
T cd03791 439 ALA---LYRDPEAWRKLQRNAMAQDFSWDRSAKEYLELY 474 (476)
T ss_pred HHH---HHcCHHHHHHHHHHHhccCCChHHHHHHHHHHH
Confidence 886 211123333344433333222 45555555544
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| >PLN00142 sucrose synthase | Back alignment and domain information |
|---|
Probab=98.47 E-value=0.00017 Score=76.31 Aligned_cols=70 Identities=19% Similarity=0.210 Sum_probs=48.3
Q ss_pred eee---ccCh-hhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeeccCCCCcccHHHHHHHHHHH----hcccch
Q 011765 360 FLT---HAGW-SSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLV----LVEEKG 431 (478)
Q Consensus 360 ~It---HgG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~~~~~~~~~l~~~i~~l----l~~~~~ 431 (478)
||. .=|. .++.||+++|+|+|+... ......|++-.-|..++.. ++++++++|.++ ++ |
T Consensus 670 fVlPS~~EgFGLvvLEAMA~GlPVVATdv----GG~~EIV~dG~tG~LV~P~------D~eaLA~aI~~lLekLl~---D 736 (815)
T PLN00142 670 FVQPALYEAFGLTVVEAMTCGLPTFATCQ----GGPAEIIVDGVSGFHIDPY------HGDEAANKIADFFEKCKE---D 736 (815)
T ss_pred EEeCCcccCCCHHHHHHHHcCCCEEEcCC----CCHHHHhcCCCcEEEeCCC------CHHHHHHHHHHHHHHhcC---C
Confidence 764 2444 489999999999999544 4455556555678888764 677888887664 45 6
Q ss_pred HHHHHHHHHHH
Q 011765 432 QIYRDKAKEMK 442 (478)
Q Consensus 432 ~~~~~~a~~~~ 442 (478)
++.++++.+-+
T Consensus 737 p~lr~~mg~~A 747 (815)
T PLN00142 737 PSYWNKISDAG 747 (815)
T ss_pred HHHHHHHHHHH
Confidence 66666655543
|
|
| >PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 | Back alignment and domain information |
|---|
Probab=98.46 E-value=1.3e-06 Score=84.91 Aligned_cols=158 Identities=15% Similarity=0.205 Sum_probs=88.0
Q ss_pred CCCceEEEEeCcccCCC-H---HHHHHHHHHHHhC-CCCEEEEEecCCCCCCCCCCCCChhhhhhcCC-CcEEEeccCCh
Q 011765 275 EKGSVVYVAFGSEAKPS-Q---EELTEIALGLELS-KLPFFWVLKKRLGQADTEPIELPDGFEERTRG-RGVVYTSWAPQ 348 (478)
Q Consensus 275 ~~~~~v~vs~Gs~~~~~-~---~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~-~n~~~~~~vpq 348 (478)
.+++.+++++=...+.. + ..+..++++|.+. +.++||.+...+. ....+.++... +|+++..-+++
T Consensus 178 ~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~~~~~vi~~~hn~p~--------~~~~i~~~l~~~~~v~~~~~l~~ 249 (346)
T PF02350_consen 178 APKPYILVTLHPVTNEDNPERLEQILEALKALAERQNVPVIFPLHNNPR--------GSDIIIEKLKKYDNVRLIEPLGY 249 (346)
T ss_dssp TTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHHTTEEEEEE--S-HH--------HHHHHHHHHTT-TTEEEE----H
T ss_pred cCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhcCCCcEEEEecCCch--------HHHHHHHHhcccCCEEEECCCCH
Confidence 45679999986555544 3 4455566666655 6778888763211 01112222221 38888776665
Q ss_pred ---hhhhcCCCceeeeeccChhhHH-HHHHhCCcEeccccccchhhHHHHHhhcCeEEEeeccCCCCcccHHHHHHHHHH
Q 011765 349 ---LAILAHDSVGGFLTHAGWSSVV-EALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRL 424 (478)
Q Consensus 349 ---~~vL~~~~~~~~ItHgG~~s~~-eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~~~~~~~~~l~~~i~~ 424 (478)
..+|.++++ +||..| ++. ||.+.|+|+|.+=...+.+ .....|..+.+ . .+.++|.+++++
T Consensus 250 ~~~l~ll~~a~~--vvgdSs--GI~eEa~~lg~P~v~iR~~geRq----e~r~~~~nvlv--~-----~~~~~I~~ai~~ 314 (346)
T PF02350_consen 250 EEYLSLLKNADL--VVGDSS--GIQEEAPSLGKPVVNIRDSGERQ----EGRERGSNVLV--G-----TDPEAIIQAIEK 314 (346)
T ss_dssp HHHHHHHHHESE--EEESSH--HHHHHGGGGT--EEECSSS-S-H----HHHHTTSEEEE--T-----SSHHHHHHHHHH
T ss_pred HHHHHHHhcceE--EEEcCc--cHHHHHHHhCCeEEEecCCCCCH----HHHhhcceEEe--C-----CCHHHHHHHHHH
Confidence 557788888 999998 666 9999999999983222222 12233555553 2 489999999999
Q ss_pred HhcccchHHHHHHHHHHHHHhcccCChHHHHHHHHHHH
Q 011765 425 VLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYL 462 (478)
Q Consensus 425 ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~ 462 (478)
+++ +..+..+++....-+.++. +.+.|++.|
T Consensus 315 ~l~---~~~~~~~~~~~~npYgdG~----as~rI~~~L 345 (346)
T PF02350_consen 315 ALS---DKDFYRKLKNRPNPYGDGN----ASERIVEIL 345 (346)
T ss_dssp HHH----HHHHHHHHCS--TT-SS-----HHHHHHHHH
T ss_pred HHh---ChHHHHhhccCCCCCCCCc----HHHHHHHhh
Confidence 999 6555555555444555555 445555444
|
1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C. |
| >PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.46 E-value=7.2e-05 Score=72.66 Aligned_cols=177 Identities=19% Similarity=0.144 Sum_probs=93.8
Q ss_pred cCCCeeeec-cCCCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccCCCHHHHHHHHHHHH---hC--CCCEEE
Q 011765 238 HRKPVIPVG-QLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLE---LS--KLPFFW 311 (478)
Q Consensus 238 ~~~~~~~vG-p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~---~~--~~~~i~ 311 (478)
.+-++.||| |+...... .....+..+.+ -.+++++|.+--||-...=...+..++++.+ +. +.+|++
T Consensus 151 ~g~~~~~VGHPl~d~~~~------~~~~~~~~~~~-l~~~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~~~p~l~fvv 223 (373)
T PF02684_consen 151 HGVPVTYVGHPLLDEVKP------EPDRAEAREKL-LDPDKPIIALLPGSRKSEIKRLLPIFLEAAKLLKKQRPDLQFVV 223 (373)
T ss_pred cCCCeEEECCcchhhhcc------CCCHHHHHHhc-CCCCCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEE
Confidence 345699999 98865443 22233333343 3345678999999855312233344555543 22 344444
Q ss_pred EEecCCCCCCCCCCCCChhhhhhc--CCCcEEEecc-CChhhhhcCCCceeeeeccChhhHHHHHHhCCcEeccc-cccc
Q 011765 312 VLKKRLGQADTEPIELPDGFEERT--RGRGVVYTSW-APQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLT-CYAD 387 (478)
Q Consensus 312 ~~~~~~~~~~~~~~~~p~~~~~~~--~~~n~~~~~~-vpq~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P-~~~D 387 (478)
..... .....+.+.. ...++.+.-. -.-.+++..+++ .+.-.| ..+.|+..+|+|||++= ...=
T Consensus 224 p~a~~---------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~m~~ad~--al~~SG-TaTLE~Al~g~P~Vv~Yk~~~l 291 (373)
T PF02684_consen 224 PVAPE---------VHEELIEEILAEYPPDVSIVIIEGESYDAMAAADA--ALAASG-TATLEAALLGVPMVVAYKVSPL 291 (373)
T ss_pred ecCCH---------HHHHHHHHHHHhhCCCCeEEEcCCchHHHHHhCcc--hhhcCC-HHHHHHHHhCCCEEEEEcCcHH
Confidence 43221 1111011110 1112222111 134567877777 555444 45789999999997753 4445
Q ss_pred hhhHHHHHhhcCeEEEee-c-cCC-------CCcccHHHHHHHHHHHhcccchHHHHHH
Q 011765 388 QGLNAKLLEEKQIVELIP-R-DEG-------DGFFTRNSVAESLRLVLVEEKGQIYRDK 437 (478)
Q Consensus 388 Q~~na~~v~~~g~G~~l~-~-~~~-------~~~~~~~~l~~~i~~ll~~~~~~~~~~~ 437 (478)
.+..|+++.+..- +.|. . ..+ ++-+|++.|.+++.++|+ |++.++.
T Consensus 292 t~~iak~lvk~~~-isL~Niia~~~v~PEliQ~~~~~~~i~~~~~~ll~---~~~~~~~ 346 (373)
T PF02684_consen 292 TYFIAKRLVKVKY-ISLPNIIAGREVVPELIQEDATPENIAAELLELLE---NPEKRKK 346 (373)
T ss_pred HHHHHHHhhcCCE-eechhhhcCCCcchhhhcccCCHHHHHHHHHHHhc---CHHHHHH
Confidence 5667777765432 1111 0 000 112799999999999999 5544433
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process |
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type | Back alignment and domain information |
|---|
Probab=98.41 E-value=0.00083 Score=68.73 Aligned_cols=164 Identities=11% Similarity=0.011 Sum_probs=87.0
Q ss_pred ceEEEEeCcccC-CCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCCCCChhhhhhc--CCCcEEEeccCChh---hh
Q 011765 278 SVVYVAFGSEAK-PSQEELTEIALGLELSKLPFFWVLKKRLGQADTEPIELPDGFEERT--RGRGVVYTSWAPQL---AI 351 (478)
Q Consensus 278 ~~v~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~--~~~n~~~~~~vpq~---~v 351 (478)
..+++..|.... ...+.+.+.+..+.+.+.+++++-.+. ....+.+.+.. ...++.+....+.. .+
T Consensus 291 ~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~G~g~--------~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~ 362 (473)
T TIGR02095 291 VPLFGVISRLTQQKGVDLLLAALPELLELGGQLVVLGTGD--------PELEEALRELAERYPGNVRVIIGYDEALAHLI 362 (473)
T ss_pred CCEEEEEecCccccChHHHHHHHHHHHHcCcEEEEECCCC--------HHHHHHHHHHHHHCCCcEEEEEcCCHHHHHHH
Confidence 466777787764 223444444444444455555543221 01111111111 12356554444553 46
Q ss_pred hcCCCceeeee---ccCh-hhHHHHHHhCCcEeccccccchhhHHHHHhhc------CeEEEeeccCCCCcccHHHHHHH
Q 011765 352 LAHDSVGGFLT---HAGW-SSVVEALQFGMPLIVLTCYADQGLNAKLLEEK------QIVELIPRDEGDGFFTRNSVAES 421 (478)
Q Consensus 352 L~~~~~~~~It---HgG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~------g~G~~l~~~~~~~~~~~~~l~~~ 421 (478)
++.+++ +|. +-|. .+.+||+++|+|+|+....+ ....+.+. +.|..++.. +++++.++
T Consensus 363 ~~~aDv--~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg----~~e~v~~~~~~~~~~~G~l~~~~------d~~~la~~ 430 (473)
T TIGR02095 363 YAGADF--ILMPSRFEPCGLTQLYAMRYGTVPIVRRTGG----LADTVVDGDPEAESGTGFLFEEY------DPGALLAA 430 (473)
T ss_pred HHhCCE--EEeCCCcCCcHHHHHHHHHCCCCeEEccCCC----ccceEecCCCCCCCCceEEeCCC------CHHHHHHH
Confidence 777777 663 2244 37899999999999865532 22223332 678887664 78899999
Q ss_pred HHHHhcccc-hHHHHHHHHHHHHHhc-ccCChHHHHHHHHHHHHh
Q 011765 422 LRLVLVEEK-GQIYRDKAKEMKGLFG-DKGRHDRYVDNFLNYLKN 464 (478)
Q Consensus 422 i~~ll~~~~-~~~~~~~a~~~~~~~~-~~~~~~~~~~~i~~~~~~ 464 (478)
|.+++..-. +++.++ ++++... +.-+-++.++..++.+++
T Consensus 431 i~~~l~~~~~~~~~~~---~~~~~~~~~~fsw~~~a~~~~~~Y~~ 472 (473)
T TIGR02095 431 LSRALRLYRQDPSLWE---ALQKNAMSQDFSWDKSAKQYVELYRS 472 (473)
T ss_pred HHHHHHHHhcCHHHHH---HHHHHHhccCCCcHHHHHHHHHHHHh
Confidence 999886100 233333 3333222 233335666766666543
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. |
| >PLN02949 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=98.40 E-value=0.00035 Score=70.72 Aligned_cols=112 Identities=16% Similarity=0.128 Sum_probs=63.0
Q ss_pred CCcEEEeccCChhh---hhcCCCceeeee---ccCh-hhHHHHHHhCCcEeccccccchhhHHHHHhhc--C-eEEEeec
Q 011765 337 GRGVVYTSWAPQLA---ILAHDSVGGFLT---HAGW-SSVVEALQFGMPLIVLTCYADQGLNAKLLEEK--Q-IVELIPR 406 (478)
Q Consensus 337 ~~n~~~~~~vpq~~---vL~~~~~~~~It---HgG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~--g-~G~~l~~ 406 (478)
.+++.+..++|+.+ +|..+++ +|+ +=|. .++.||+++|+|+|+....+- ....+.+. | .|...
T Consensus 334 ~~~V~f~g~v~~~el~~ll~~a~~--~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp---~~eIV~~~~~g~tG~l~-- 406 (463)
T PLN02949 334 DGDVEFHKNVSYRDLVRLLGGAVA--GLHSMIDEHFGISVVEYMAAGAVPIAHNSAGP---KMDIVLDEDGQQTGFLA-- 406 (463)
T ss_pred CCcEEEeCCCCHHHHHHHHHhCcE--EEeCCccCCCChHHHHHHHcCCcEEEeCCCCC---cceeeecCCCCcccccC--
Confidence 45788888998754 6677777 662 2233 379999999999999765320 00001110 1 23221
Q ss_pred cCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhcccCChHHHHHHHHHHHH
Q 011765 407 DEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLK 463 (478)
Q Consensus 407 ~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~~ 463 (478)
. +.++++++|.+++++ +++.++++.+-+....+.=+.++..+.+.+.++
T Consensus 407 -~-----~~~~la~ai~~ll~~--~~~~r~~m~~~ar~~~~~FS~e~~~~~~~~~i~ 455 (463)
T PLN02949 407 -T-----TVEEYADAILEVLRM--RETERLEIAAAARKRANRFSEQRFNEDFKDAIR 455 (463)
T ss_pred -C-----CHHHHHHHHHHHHhC--CHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 2 788999999999973 233333332222222222333445555555554
|
|
| >COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.37 E-value=7.8e-05 Score=71.07 Aligned_cols=355 Identities=17% Similarity=0.154 Sum_probs=189.1
Q ss_pred CccEEEEecCCCccCHHHHHHHHHHHHhCC-CeEEEEeCCCcc--ccCCCCCCCCCCCeEEEEecCCCCCCCCCCccccC
Q 011765 5 SKLQIAMFPWLAFGHMIPWLELAKLIAQKG-HKIFFISTPRNI--DRLPRLPQNLASMIQFVKISLPHVDNLRENAEATI 81 (478)
Q Consensus 5 ~~~~il~~~~~~~gH~~p~l~La~~L~~rG-h~Vt~~~~~~~~--~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~~~ 81 (478)
+++||+++ ++.+=-+.-+..|.+++.+.+ .+..++.+...+ +.... . ++.-.++.| + ......
T Consensus 2 ~~~Kv~~I-~GTRPE~iKmapli~~~~~~~~~~~~vi~TGQH~d~em~~~-~------le~~~i~~p--d----y~L~i~ 67 (383)
T COG0381 2 KMLKVLTI-FGTRPEAIKMAPLVKALEKDPDFELIVIHTGQHRDYEMLDQ-V------LELFGIRKP--D----YDLNIM 67 (383)
T ss_pred CceEEEEE-EecCHHHHHHhHHHHHHHhCCCCceEEEEecccccHHHHHH-H------HHHhCCCCC--C----cchhcc
Confidence 35566554 677788889999999999986 777777787776 32221 1 121222110 1 000000
Q ss_pred CCChhHHHHHHHHHhhhhHHHHHHHhhcCCCEEEE--cCCcc-cHHHHHHHhCCCeEEEecchHHHHHhhcccccccccc
Q 011765 82 DLPYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLF--DFAAY-WLPARARELGIPSGFFSIFTAATLGYFGPSSVLINDS 158 (478)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~--D~~~~-~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~~~~ 158 (478)
... ..+..........+.+++++.+||+|++ |.... ++.++|.+++||+.-+-.+.-+
T Consensus 68 ~~~----~tl~~~t~~~i~~~~~vl~~~kPD~VlVhGDT~t~lA~alaa~~~~IpV~HvEAGlRt--------------- 128 (383)
T COG0381 68 KPG----QTLGEITGNIIEGLSKVLEEEKPDLVLVHGDTNTTLAGALAAFYLKIPVGHVEAGLRT--------------- 128 (383)
T ss_pred ccC----CCHHHHHHHHHHHHHHHHHhhCCCEEEEeCCcchHHHHHHHHHHhCCceEEEeccccc---------------
Confidence 001 1233444445568888899999999985 44433 5588999999999876331110
Q ss_pred CCCCCCCCcccCCCcccccccccccchhhhhhhhhhhcCCcccchhhhhhhccccCCcEEEEcCcCccChHH-HHHHHhh
Q 011765 159 GDHLKTPEDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEW-LKLLEQL 237 (478)
Q Consensus 159 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~-~~~~~~~ 237 (478)
-..+.| ... .+.+ . -.-+++.+..+ -.. -..+++.
T Consensus 129 ------------~~~~~P--EE~---NR~l--------------------~--~~~S~~hfapt-----e~ar~nLl~EG 164 (383)
T COG0381 129 ------------GDLYFP--EEI---NRRL--------------------T--SHLSDLHFAPT-----EIARKNLLREG 164 (383)
T ss_pred ------------CCCCCc--HHH---HHHH--------------------H--HHhhhhhcCCh-----HHHHHHHHHcC
Confidence 000111 100 0000 0 00111112211 000 0112222
Q ss_pred cCC-Ceeeec-cCCCCCCCCCCCCCCCChhhHhhh-cccCCCCceEEEEeCcccCCCHHHHHHHHHHH----HhCCCCEE
Q 011765 238 HRK-PVIPVG-QLPTTTGDGDSDAETDTWRSIKEW-LDEQEKGSVVYVAFGSEAKPSQEELTEIALGL----ELSKLPFF 310 (478)
Q Consensus 238 ~~~-~~~~vG-p~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al----~~~~~~~i 310 (478)
.++ ++..+| +...-......+ .....+.... ++. +++..+++++=...+.. +.+..+++++ ++. ..+.
T Consensus 165 ~~~~~IfvtGnt~iDal~~~~~~--~~~~~~~~~~~~~~-~~~~~iLvT~HRreN~~-~~~~~i~~al~~i~~~~-~~~~ 239 (383)
T COG0381 165 VPEKRIFVTGNTVIDALLNTRDR--VLEDSKILAKGLDD-KDKKYILVTAHRRENVG-EPLEEICEALREIAEEY-PDVI 239 (383)
T ss_pred CCccceEEeCChHHHHHHHHHhh--hccchhhHHhhhcc-ccCcEEEEEcchhhccc-ccHHHHHHHHHHHHHhC-CCce
Confidence 333 244455 222110000000 0001111111 222 23448888875555444 5555666655 333 2334
Q ss_pred EEEecCCCCCCCCCCCCChhhhhhcC-CCcEEEec---cCChhhhhcCCCceeeeeccChhhHHHHHHhCCcEecccccc
Q 011765 311 WVLKKRLGQADTEPIELPDGFEERTR-GRGVVYTS---WAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYA 386 (478)
Q Consensus 311 ~~~~~~~~~~~~~~~~~p~~~~~~~~-~~n~~~~~---~vpq~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~ 386 (478)
.++.... ...+-+-...+.+ .+++.+.+ |.+...++.++.+ ++|-.|. -.-||-..|+|++++-...
T Consensus 240 viyp~H~------~~~v~e~~~~~L~~~~~v~li~pl~~~~f~~L~~~a~~--iltDSGg-iqEEAp~lg~Pvl~lR~~T 310 (383)
T COG0381 240 VIYPVHP------RPRVRELVLKRLKNVERVKLIDPLGYLDFHNLMKNAFL--ILTDSGG-IQEEAPSLGKPVLVLRDTT 310 (383)
T ss_pred EEEeCCC------ChhhhHHHHHHhCCCCcEEEeCCcchHHHHHHHHhceE--EEecCCc-hhhhHHhcCCcEEeeccCC
Confidence 4443321 1111111112222 23566544 5566778888888 9998764 3679999999999999999
Q ss_pred chhhHHHHHhhcCeEEEeeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHh
Q 011765 387 DQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLKN 464 (478)
Q Consensus 387 DQ~~na~~v~~~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~ 464 (478)
++|. ..+.|.-+.+. .+.+.|.+++..+++ +++..++++....-..++..+.+.++.+..+...
T Consensus 311 ERPE----~v~agt~~lvg-------~~~~~i~~~~~~ll~---~~~~~~~m~~~~npYgdg~as~rIv~~l~~~~~~ 374 (383)
T COG0381 311 ERPE----GVEAGTNILVG-------TDEENILDAATELLE---DEEFYERMSNAKNPYGDGNASERIVEILLNYFDS 374 (383)
T ss_pred CCcc----ceecCceEEeC-------ccHHHHHHHHHHHhh---ChHHHHHHhcccCCCcCcchHHHHHHHHHHHhhh
Confidence 9998 23344444443 377999999999999 8888888888777777776666666666665543
|
|
| >cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=98.31 E-value=0.0019 Score=63.86 Aligned_cols=109 Identities=17% Similarity=0.131 Sum_probs=65.9
Q ss_pred CCcEEEeccCChhh---hhcCCCceeee------eccCh-hhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeec
Q 011765 337 GRGVVYTSWAPQLA---ILAHDSVGGFL------THAGW-SSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPR 406 (478)
Q Consensus 337 ~~n~~~~~~vpq~~---vL~~~~~~~~I------tHgG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~ 406 (478)
.+|+.+..++|..+ .+.++++.++- +.++. +.+.|++++|+|+|+.+.. ..++..+ |..+..
T Consensus 253 ~~nV~~~G~~~~~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~~-------~~~~~~~-~~~~~~ 324 (373)
T cd04950 253 LPNVHYLGPKPYKELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPLP-------EVRRYED-EVVLIA 324 (373)
T ss_pred CCCEEEeCCCCHHHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCCCEEecCcH-------HHHhhcC-cEEEeC
Confidence 35899999998755 56778884332 22333 5699999999999987631 2222223 333322
Q ss_pred cCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHh
Q 011765 407 DEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLKN 464 (478)
Q Consensus 407 ~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~ 464 (478)
. +.+++.++|.+++.++..+..++ ++ + +.+..+-+..++.+++.+..
T Consensus 325 -~-----d~~~~~~ai~~~l~~~~~~~~~~-~~---~-~~~~~sW~~~a~~~~~~l~~ 371 (373)
T cd04950 325 -D-----DPEEFVAAIEKALLEDGPARERR-RL---R-LAAQNSWDARAAEMLEALQE 371 (373)
T ss_pred -C-----CHHHHHHHHHHHHhcCCchHHHH-HH---H-HHHHCCHHHHHHHHHHHHHh
Confidence 2 78999999999876322222222 11 1 34444556666767665543
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >PRK10125 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=98.31 E-value=0.002 Score=64.26 Aligned_cols=115 Identities=12% Similarity=0.073 Sum_probs=65.3
Q ss_pred eEEEEeCcccCCCHHHHHHHHHHHHhCCCCE-EEEEecCCCCCCCCCCCCChhhhhhcCCCcEEEeccCC-h---hhhhc
Q 011765 279 VVYVAFGSEAKPSQEELTEIALGLELSKLPF-FWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAP-Q---LAILA 353 (478)
Q Consensus 279 ~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~-i~~~~~~~~~~~~~~~~~p~~~~~~~~~~n~~~~~~vp-q---~~vL~ 353 (478)
.+++..|.........+..+++++...+.++ ++.++... ...+ .++....+.. + .++++
T Consensus 242 ~~il~v~~~~~~~~Kg~~~li~A~~~l~~~~~L~ivG~g~-------~~~~---------~~v~~~g~~~~~~~l~~~y~ 305 (405)
T PRK10125 242 PKIAVVAHDLRYDGKTDQQLVREMMALGDKIELHTFGKFS-------PFTA---------GNVVNHGFETDKRKLMSALN 305 (405)
T ss_pred CEEEEEEeccccCCccHHHHHHHHHhCCCCeEEEEEcCCC-------cccc---------cceEEecCcCCHHHHHHHHH
Confidence 3444455533223344566888887765544 33343221 1111 2454445543 2 33555
Q ss_pred CCCceeeeec----cChhhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeeccCCCCcccHHHHHHHH
Q 011765 354 HDSVGGFLTH----AGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESL 422 (478)
Q Consensus 354 ~~~~~~~ItH----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~~~~~~~~~l~~~i 422 (478)
.+++ ||.- |--+++.||+++|+|+|+....+ ....+ ..+-|..++.. +.+.|++++
T Consensus 306 ~aDv--fV~pS~~Egfp~vilEAmA~G~PVVat~~gG----~~Eiv-~~~~G~lv~~~------d~~~La~~~ 365 (405)
T PRK10125 306 QMDA--LVFSSRVDNYPLILCEALSIGVPVIATHSDA----AREVL-QKSGGKTVSEE------EVLQLAQLS 365 (405)
T ss_pred hCCE--EEECCccccCcCHHHHHHHcCCCEEEeCCCC----hHHhE-eCCcEEEECCC------CHHHHHhcc
Confidence 5777 7742 23368999999999999987654 22333 33568888765 677777643
|
|
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
Probab=98.21 E-value=0.0055 Score=66.83 Aligned_cols=116 Identities=11% Similarity=-0.011 Sum_probs=63.9
Q ss_pred cEEEeccCChh---hhhcCCCceeeeec---cCh-hhHHHHHHhCCcEecccccc--chhh-------HHHHHhhcCeEE
Q 011765 339 GVVYTSWAPQL---AILAHDSVGGFLTH---AGW-SSVVEALQFGMPLIVLTCYA--DQGL-------NAKLLEEKQIVE 402 (478)
Q Consensus 339 n~~~~~~vpq~---~vL~~~~~~~~ItH---gG~-~s~~eal~~GvP~l~~P~~~--DQ~~-------na~~v~~~g~G~ 402 (478)
++.+....+.. .+++.+++ ||.- =|. .+.+||+++|+|+|+....+ |.-. .++.....+-|.
T Consensus 901 rV~f~g~~de~lah~iyaaADi--flmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGf 978 (1036)
T PLN02316 901 RARLCLTYDEPLSHLIYAGADF--ILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGF 978 (1036)
T ss_pred eEEEEecCCHHHHHHHHHhCcE--EEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCceE
Confidence 45554344443 46777777 7742 232 58999999999999865432 2111 111011124577
Q ss_pred EeeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhccc-CChHHHHHHHHHHHHh
Q 011765 403 LIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFGDK-GRHDRYVDNFLNYLKN 464 (478)
Q Consensus 403 ~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~-~~~~~~~~~i~~~~~~ 464 (478)
..+.. +++.|..+|.+++.. ....++....+++..... -+-.+.++..++.++.
T Consensus 979 lf~~~------d~~aLa~AL~raL~~--~~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~~LY~~ 1033 (1036)
T PLN02316 979 SFDGA------DAAGVDYALNRAISA--WYDGRDWFNSLCKRVMEQDWSWNRPALDYMELYHS 1033 (1036)
T ss_pred EeCCC------CHHHHHHHHHHHHhh--hhhhHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHH
Confidence 77653 788999999999982 122233333333332222 2335566666665544
|
|
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.18 E-value=0.0027 Score=63.80 Aligned_cols=77 Identities=22% Similarity=0.167 Sum_probs=52.8
Q ss_pred CCcEEEeccCChhh---hhcCCCceeeee-----ccChhhHHHHHHhCCcEeccccccchhhHHHHHh---hcCeEEEee
Q 011765 337 GRGVVYTSWAPQLA---ILAHDSVGGFLT-----HAGWSSVVEALQFGMPLIVLTCYADQGLNAKLLE---EKQIVELIP 405 (478)
Q Consensus 337 ~~n~~~~~~vpq~~---vL~~~~~~~~It-----HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~---~~g~G~~l~ 405 (478)
.+++.+..++|+.+ +|..+++ +|+ |-| .++.||+++|+|+|+.-..+. ....+. +...|...
T Consensus 304 ~~~V~f~g~v~~~~l~~~l~~adv--~v~~s~~E~Fg-i~~lEAMa~G~pvIa~~~ggp---~~~iv~~~~~g~~G~l~- 376 (419)
T cd03806 304 EDKVEFVVNAPFEELLEELSTASI--GLHTMWNEHFG-IGVVEYMAAGLIPLAHASGGP---LLDIVVPWDGGPTGFLA- 376 (419)
T ss_pred CCeEEEecCCCHHHHHHHHHhCeE--EEECCccCCcc-cHHHHHHHcCCcEEEEcCCCC---chheeeccCCCCceEEe-
Confidence 35788888998754 6777777 553 333 488999999999998554321 111222 34567653
Q ss_pred ccCCCCcccHHHHHHHHHHHhc
Q 011765 406 RDEGDGFFTRNSVAESLRLVLV 427 (478)
Q Consensus 406 ~~~~~~~~~~~~l~~~i~~ll~ 427 (478)
. +++++++++.++++
T Consensus 377 --~-----d~~~la~ai~~ll~ 391 (419)
T cd03806 377 --S-----TAEEYAEAIEKILS 391 (419)
T ss_pred --C-----CHHHHHHHHHHHHh
Confidence 2 78999999999998
|
ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. |
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.16 E-value=0.00016 Score=72.30 Aligned_cols=148 Identities=18% Similarity=0.218 Sum_probs=89.5
Q ss_pred CceEEEEeCcccCC-CHHHHHHHHHHHHhC--CCCEEEEEecCCCCCCCCCCCCChhhhhh----cCCCcEEEeccCChh
Q 011765 277 GSVVYVAFGSEAKP-SQEELTEIALGLELS--KLPFFWVLKKRLGQADTEPIELPDGFEER----TRGRGVVYTSWAPQL 349 (478)
Q Consensus 277 ~~~v~vs~Gs~~~~-~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~~~~~p~~~~~~----~~~~n~~~~~~vpq~ 349 (478)
++..+++.|..... +.+.+.+.+..+.+. +.++.|++-+... .-+.+.+. ....++.+..|+++.
T Consensus 229 ~~~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~~~l~~~iiG~g~--------~~~~l~~~~~~~~~~~~V~f~G~v~~~ 300 (407)
T cd04946 229 DTLRIVSCSYLVPVKRVDLIIKALAALAKARPSIKIKWTHIGGGP--------LEDTLKELAESKPENISVNFTGELSNS 300 (407)
T ss_pred CCEEEEEeeccccccCHHHHHHHHHHHHHhCCCceEEEEEEeCch--------HHHHHHHHHHhcCCCceEEEecCCChH
Confidence 34667778877642 233333333333322 2456666543211 11112111 123468888999986
Q ss_pred h---hhcCCCceeeeecc---C-hhhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeeccCCCCcccHHHHHHHH
Q 011765 350 A---ILAHDSVGGFLTHA---G-WSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESL 422 (478)
Q Consensus 350 ~---vL~~~~~~~~ItHg---G-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~~~~~~~~~l~~~i 422 (478)
+ ++..+++++||... | -++++||+++|+|+|+.. -......+.+.+.|..++... +.++++++|
T Consensus 301 e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~----vgg~~e~i~~~~~G~l~~~~~-----~~~~la~~I 371 (407)
T cd04946 301 EVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATN----VGGTPEIVDNGGNGLLLSKDP-----TPNELVSSL 371 (407)
T ss_pred HHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCC----CCCcHHHhcCCCcEEEeCCCC-----CHHHHHHHH
Confidence 5 44444444577443 2 368999999999999854 444566666666898887653 889999999
Q ss_pred HHHhcccchHHHHHHHHHHHHH
Q 011765 423 RLVLVEEKGQIYRDKAKEMKGL 444 (478)
Q Consensus 423 ~~ll~~~~~~~~~~~a~~~~~~ 444 (478)
.++++ |++.++++.+-+..
T Consensus 372 ~~ll~---~~~~~~~m~~~ar~ 390 (407)
T cd04946 372 SKFID---NEEEYQTMREKARE 390 (407)
T ss_pred HHHHh---CHHHHHHHHHHHHH
Confidence 99999 66666555443333
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. |
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Probab=98.12 E-value=0.00042 Score=68.45 Aligned_cols=89 Identities=17% Similarity=0.204 Sum_probs=61.8
Q ss_pred CcEEEeccCCh-hhhhcCCCceeeeecc--ChhhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeeccCCCCccc
Q 011765 338 RGVVYTSWAPQ-LAILAHDSVGGFLTHA--GWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFT 414 (478)
Q Consensus 338 ~n~~~~~~vpq-~~vL~~~~~~~~ItHg--G~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~~~~~~ 414 (478)
+++.+..+.++ ..++..+++-++.++. ...++.||+++|+|+|+..... .....+.+...|..++.. +
T Consensus 261 ~~v~~~g~~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~---g~~~~v~~~~~G~lv~~~------d 331 (372)
T cd04949 261 DYVFLKGYTRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNY---GPSEIIEDGENGYLVPKG------D 331 (372)
T ss_pred ceEEEcCCCCCHHHHHhhhhEEEecccccccChHHHHHHhCCCCEEEecCCC---CcHHHcccCCCceEeCCC------c
Confidence 46777666665 4578888884444543 3469999999999999964321 234445555678877663 8
Q ss_pred HHHHHHHHHHHhcccchHHHHHHH
Q 011765 415 RNSVAESLRLVLVEEKGQIYRDKA 438 (478)
Q Consensus 415 ~~~l~~~i~~ll~~~~~~~~~~~a 438 (478)
.++++++|.++++ +++.++++
T Consensus 332 ~~~la~~i~~ll~---~~~~~~~~ 352 (372)
T cd04949 332 IEALAEAIIELLN---DPKLLQKF 352 (372)
T ss_pred HHHHHHHHHHHHc---CHHHHHHH
Confidence 8999999999999 65444333
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra |
| >PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.08 E-value=2.9e-05 Score=67.49 Aligned_cols=92 Identities=17% Similarity=0.299 Sum_probs=69.9
Q ss_pred CCcEEEeccCCh---hhhhcCCCceeeeec----cChhhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeeccCC
Q 011765 337 GRGVVYTSWAPQ---LAILAHDSVGGFLTH----AGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEG 409 (478)
Q Consensus 337 ~~n~~~~~~vpq---~~vL~~~~~~~~ItH----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~ 409 (478)
.+++.+..++++ .+++..+++ +|+. ++.+++.||+++|+|+|+ .+-..+...+.+.+.|..++..
T Consensus 72 ~~~i~~~~~~~~~~l~~~~~~~di--~v~~s~~e~~~~~~~Ea~~~g~pvI~----~~~~~~~e~~~~~~~g~~~~~~-- 143 (172)
T PF00534_consen 72 KENIIFLGYVPDDELDELYKSSDI--FVSPSRNEGFGLSLLEAMACGCPVIA----SDIGGNNEIINDGVNGFLFDPN-- 143 (172)
T ss_dssp GTTEEEEESHSHHHHHHHHHHTSE--EEE-BSSBSS-HHHHHHHHTT-EEEE----ESSTHHHHHSGTTTSEEEESTT--
T ss_pred ccccccccccccccccccccccee--ccccccccccccccccccccccceee----ccccCCceeeccccceEEeCCC--
Confidence 357888888883 457777787 7765 556799999999999998 5566677777777889998774
Q ss_pred CCcccHHHHHHHHHHHhcccchHHHHHHHHHHHH
Q 011765 410 DGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKG 443 (478)
Q Consensus 410 ~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~ 443 (478)
+.+++.++|.++++ ++++++++.+-++
T Consensus 144 ----~~~~l~~~i~~~l~---~~~~~~~l~~~~~ 170 (172)
T PF00534_consen 144 ----DIEELADAIEKLLN---DPELRQKLGKNAR 170 (172)
T ss_dssp ----SHHHHHHHHHHHHH---HHHHHHHHHHHHH
T ss_pred ----CHHHHHHHHHHHHC---CHHHHHHHHHHhc
Confidence 89999999999999 7776666665443
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B .... |
| >PRK09814 beta-1,6-galactofuranosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.06 E-value=0.0016 Score=63.19 Aligned_cols=109 Identities=14% Similarity=0.183 Sum_probs=81.1
Q ss_pred CcEEEeccCChhhhh---cCCCceeeeecc-------C------hhhHHHHHHhCCcEeccccccchhhHHHHHhhcCeE
Q 011765 338 RGVVYTSWAPQLAIL---AHDSVGGFLTHA-------G------WSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIV 401 (478)
Q Consensus 338 ~n~~~~~~vpq~~vL---~~~~~~~~ItHg-------G------~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G 401 (478)
+|+.+..|+|+.++. .. +.+++...- . -+-+.+++++|+|+|+. ++...+..|++.++|
T Consensus 207 ~~V~f~G~~~~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~----~~~~~~~~V~~~~~G 281 (333)
T PRK09814 207 ANISYKGWFDPEELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVW----SKAAIADFIVENGLG 281 (333)
T ss_pred CCeEEecCCCHHHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEEC----CCccHHHHHHhCCce
Confidence 489999999997753 33 443333211 1 12377889999999984 567888999999999
Q ss_pred EEeeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhcccCChHHHHHHHHH
Q 011765 402 ELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLN 460 (478)
Q Consensus 402 ~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~ 460 (478)
..++ +.+++.+++.++.++ .-..+++|++++++.++.+-...++++.++.
T Consensus 282 ~~v~--------~~~el~~~l~~~~~~-~~~~m~~n~~~~~~~~~~g~~~~~~~~~~~~ 331 (333)
T PRK09814 282 FVVD--------SLEELPEIIDNITEE-EYQEMVENVKKISKLLRNGYFTKKALVDAIK 331 (333)
T ss_pred EEeC--------CHHHHHHHHHhcCHH-HHHHHHHHHHHHHHHHhcchhHHHHHHHHHh
Confidence 9986 345788888886542 2467899999999999999888888877665
|
|
| >TIGR02918 accessory Sec system glycosylation protein GtfA | Back alignment and domain information |
|---|
Probab=98.06 E-value=0.0014 Score=67.07 Aligned_cols=118 Identities=13% Similarity=0.164 Sum_probs=72.7
Q ss_pred CCcEEEeccCChhhhhcCCCceeeee---ccCh-hhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeeccCCCC-
Q 011765 337 GRGVVYTSWAPQLAILAHDSVGGFLT---HAGW-SSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDG- 411 (478)
Q Consensus 337 ~~n~~~~~~vpq~~vL~~~~~~~~It---HgG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~~~- 411 (478)
.+++.+..+.+..+++..+++ +|. .=|. .+++||+++|+|+|+.... ..+...+++-.-|..++...+.+
T Consensus 375 ~~~V~f~G~~~~~~~~~~adv--~v~pS~~Egfgl~~lEAma~G~PVI~~dv~---~G~~eiI~~g~nG~lv~~~~~~~d 449 (500)
T TIGR02918 375 QDYIHLKGHRNLSEVYKDYEL--YLSASTSEGFGLTLMEAVGSGLGMIGFDVN---YGNPTFIEDNKNGYLIPIDEEEDD 449 (500)
T ss_pred CCeEEEcCCCCHHHHHHhCCE--EEEcCccccccHHHHHHHHhCCCEEEecCC---CCCHHHccCCCCEEEEeCCccccc
Confidence 356788888888889988888 664 3344 6899999999999995542 12444555555688776321000
Q ss_pred ccc-HHHHHHHHHHHhcccchHHHHHHHHHHHHHhcccCChHHHHHHHHHHHH
Q 011765 412 FFT-RNSVAESLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLK 463 (478)
Q Consensus 412 ~~~-~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~~ 463 (478)
.-+ .+.|+++|.++++++.-..+.+++.+.++. =..+..++.+.+.++
T Consensus 450 ~~~~~~~la~~I~~ll~~~~~~~~~~~a~~~a~~----fs~~~v~~~w~~ll~ 498 (500)
T TIGR02918 450 EDQIITALAEKIVEYFNSNDIDAFHEYSYQIAEG----FLTANIIEKWKKLVR 498 (500)
T ss_pred hhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHh----cCHHHHHHHHHHHHh
Confidence 012 788999999999721112334444443333 333456666666554
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. |
| >PRK14099 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=97.98 E-value=0.0061 Score=62.31 Aligned_cols=100 Identities=11% Similarity=0.081 Sum_probs=57.1
Q ss_pred CCCceeeee---ccCh-hhHHHHHHhCCcEecccccc--chhhHHHHHhh---cCeEEEeeccCCCCcccHHHHHHHHHH
Q 011765 354 HDSVGGFLT---HAGW-SSVVEALQFGMPLIVLTCYA--DQGLNAKLLEE---KQIVELIPRDEGDGFFTRNSVAESLRL 424 (478)
Q Consensus 354 ~~~~~~~It---HgG~-~s~~eal~~GvP~l~~P~~~--DQ~~na~~v~~---~g~G~~l~~~~~~~~~~~~~l~~~i~~ 424 (478)
.+++ ||. +=|. .+.+||+++|+|.|+....+ |--....-..+ .+.|..++.. +.++|.++|.+
T Consensus 369 ~aDi--fv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~~------d~~~La~ai~~ 440 (485)
T PRK14099 369 GADA--LLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQFSPV------TADALAAALRK 440 (485)
T ss_pred cCCE--EEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEeCCC------CHHHHHHHHHH
Confidence 3555 774 3444 47899999998777754322 21111100000 1467777664 78999999987
Q ss_pred ---HhcccchHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHhcc
Q 011765 425 ---VLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLKNHR 466 (478)
Q Consensus 425 ---ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 466 (478)
+++ |++.++++.+-+. ...-+-++.++..++.+++..
T Consensus 441 a~~l~~---d~~~~~~l~~~~~--~~~fSw~~~a~~y~~lY~~l~ 480 (485)
T PRK14099 441 TAALFA---DPVAWRRLQRNGM--TTDVSWRNPAQHYAALYRSLV 480 (485)
T ss_pred HHHHhc---CHHHHHHHHHHhh--hhcCChHHHHHHHHHHHHHHH
Confidence 566 5555554444321 223333667777777666543
|
|
| >PLN02501 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=97.89 E-value=0.013 Score=60.87 Aligned_cols=100 Identities=12% Similarity=0.094 Sum_probs=61.6
Q ss_pred EEEeccCChh-hhhcCCCceeeee---ccC-hhhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeeccCCCCccc
Q 011765 340 VVYTSWAPQL-AILAHDSVGGFLT---HAG-WSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFT 414 (478)
Q Consensus 340 ~~~~~~vpq~-~vL~~~~~~~~It---HgG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~~~~~~ 414 (478)
+.+..+.++. ++++.+++ ||. +=| .+++.||+++|+|+|+....+... +.+ |.+-.+. . +
T Consensus 603 V~FLG~~dd~~~lyasaDV--FVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~e~-----V~~-g~nGll~--~-----D 667 (794)
T PLN02501 603 LNFLKGRDHADDSLHGYKV--FINPSISDVLCTATAEALAMGKFVVCADHPSNEF-----FRS-FPNCLTY--K-----T 667 (794)
T ss_pred EEecCCCCCHHHHHHhCCE--EEECCCcccchHHHHHHHHcCCCEEEecCCCCce-----Eee-cCCeEec--C-----C
Confidence 5555666654 48888887 774 233 378999999999999987654321 222 2222222 3 7
Q ss_pred HHHHHHHHHHHhcccchHHHHHHHHHHHHHhcccCChHHHHHHHHHHH
Q 011765 415 RNSVAESLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYL 462 (478)
Q Consensus 415 ~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~ 462 (478)
.+++.++|.++|+ ++..+..+.. ...-+-+++++.++++-
T Consensus 668 ~EafAeAI~~LLs---d~~~rl~~~a-----~~~~SWeAaadrLle~~ 707 (794)
T PLN02501 668 SEDFVAKVKEALA---NEPQPLTPEQ-----RYNLSWEAATQRFMEYS 707 (794)
T ss_pred HHHHHHHHHHHHh---CchhhhHHHH-----HhhCCHHHHHHHHHHhh
Confidence 8999999999999 4443322221 12333455666666654
|
|
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=97.87 E-value=0.0013 Score=59.36 Aligned_cols=69 Identities=26% Similarity=0.252 Sum_probs=50.8
Q ss_pred CccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCCCCCCCCccccCCCChhHHHHHHHHH
Q 011765 16 AFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVDNLRENAEATIDLPYDEVKYLKQSF 95 (478)
Q Consensus 16 ~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 95 (478)
..|+-.....|++.|.++||+|++++
T Consensus 12 ~~G~~~~~~~l~~~L~~~g~~v~v~~------------------------------------------------------ 37 (229)
T cd01635 12 GGGVELVLLDLAKALARRGHEVEVVA------------------------------------------------------ 37 (229)
T ss_pred CCCchhHHHHHHHHHHHcCCeEEEEE------------------------------------------------------
Confidence 55999999999999999999999988
Q ss_pred hhhhHHHHHHHhhcCCCEEEEcCCcccHH---HHHHHhCCCeEEEec
Q 011765 96 DCLEEPMAKLLQSLAPDWLLFDFAAYWLP---ARARELGIPSGFFSI 139 (478)
Q Consensus 96 ~~~~~~l~~ll~~~~pD~vI~D~~~~~~~---~~A~~lgIP~i~~~~ 139 (478)
.+...+...+++.+||+|+......... ..+...++|++....
T Consensus 38 -~~~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~i~~~h 83 (229)
T cd01635 38 -LLLLLLLRILRGFKPDVVHAHGYYPAPLALLLAARLLGIPLVLTVH 83 (229)
T ss_pred -echHHHHHHHhhcCCCEEEEcCCCcHHHHHHHHHhhCCCCEEEEEc
Confidence 1112233344477999999886554333 457788999887644
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >COG5017 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.82 E-value=0.00061 Score=54.38 Aligned_cols=129 Identities=19% Similarity=0.138 Sum_probs=77.1
Q ss_pred EEEEeCcccCCCHHHHHH--HHHHHHhCCCCEEEEEecCCCCCCCCCCCCChhhhhhcCCCcEEEeccCChhh-hhcCCC
Q 011765 280 VYVAFGSEAKPSQEELTE--IALGLELSKLPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLA-ILAHDS 356 (478)
Q Consensus 280 v~vs~Gs~~~~~~~~~~~--~~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~n~~~~~~vpq~~-vL~~~~ 356 (478)
+||+-||....-...+.. +.+-.+....++|..++..+ .+.... -.++-+++.+-.+ +..-++
T Consensus 2 ifVTvGstf~~f~rlv~k~e~~el~~~i~e~lIvQyGn~d------~kpvag--------l~v~~F~~~~kiQsli~dar 67 (161)
T COG5017 2 IFVTVGSTFYPFNRLVLKIEVLELTELIQEELIVQYGNGD------IKPVAG--------LRVYGFDKEEKIQSLIHDAR 67 (161)
T ss_pred eEEEecCccchHHHHHhhHHHHHHHHHhhhheeeeecCCC------cccccc--------cEEEeechHHHHHHHhhcce
Confidence 689999985311111111 22222333456788887541 122111 1233344445433 444455
Q ss_pred ceeeeeccChhhHHHHHHhCCcEeccccc--------cchhhHHHHHhhcCeEEEeeccCCCCcccHHHHHHHHHHHhc
Q 011765 357 VGGFLTHAGWSSVVEALQFGMPLIVLTCY--------ADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLV 427 (478)
Q Consensus 357 ~~~~ItHgG~~s~~eal~~GvP~l~~P~~--------~DQ~~na~~v~~~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~ 427 (478)
+ +|+|||-||+..++..++|.|++|-. ..|-..|..+.+.+.-+.....+. .-.+-+.....+++.
T Consensus 68 I--VISHaG~GSIL~~~rl~kplIv~pr~s~y~elvDdHQvela~klae~~~vv~~spte~---~L~a~l~~s~~~v~~ 141 (161)
T COG5017 68 I--VISHAGEGSILLLLRLDKPLIVVPRSSQYQELVDDHQVELALKLAEINYVVACSPTEL---VLQAGLQVSVADVLH 141 (161)
T ss_pred E--EEeccCcchHHHHhhcCCcEEEEECchhHHHhhhhHHHHHHHHHHhcCceEEEcCCch---hhHHhHhhhhhhhcC
Confidence 5 99999999999999999999999953 378889999999887766654330 133444444445544
|
|
| >PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.0006 Score=67.76 Aligned_cols=169 Identities=18% Similarity=0.217 Sum_probs=91.4
Q ss_pred CCCceEEEEeCcccCCCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCCCCChhhhhhc-----CCCcEEEeccCChh
Q 011765 275 EKGSVVYVAFGSEAKPSQEELTEIALGLELSKLPFFWVLKKRLGQADTEPIELPDGFEERT-----RGRGVVYTSWAPQL 349 (478)
Q Consensus 275 ~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~-----~~~n~~~~~~vpq~ 349 (478)
+++.++|.||....+.+++.+..-.+-|+..+.-.+|....... . ...+.+.. ..+.+.+..+.+..
T Consensus 282 p~d~vvF~~fn~~~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~~------~--~~~l~~~~~~~Gv~~~Ri~f~~~~~~~ 353 (468)
T PF13844_consen 282 PEDAVVFGSFNNLFKISPETLDLWARILKAVPNSRLWLLRFPAS------G--EARLRRRFAAHGVDPDRIIFSPVAPRE 353 (468)
T ss_dssp -SSSEEEEE-S-GGG--HHHHHHHHHHHHHSTTEEEEEEETSTT------H--HHHHHHHHHHTTS-GGGEEEEE---HH
T ss_pred CCCceEEEecCccccCCHHHHHHHHHHHHhCCCcEEEEeeCCHH------H--HHHHHHHHHHcCCChhhEEEcCCCCHH
Confidence 34569999999999999988888888888888888888764321 0 11222221 23467777777765
Q ss_pred hhh---cCCCceeee---eccChhhHHHHHHhCCcEecccc-ccchhhHHHHHhhcCeEEEeeccCCCCcccHHHHHHHH
Q 011765 350 AIL---AHDSVGGFL---THAGWSSVVEALQFGMPLIVLTC-YADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESL 422 (478)
Q Consensus 350 ~vL---~~~~~~~~I---tHgG~~s~~eal~~GvP~l~~P~-~~DQ~~na~~v~~~g~G~~l~~~~~~~~~~~~~l~~~i 422 (478)
+-| ..+|+ ++ ..+|.+|++|||+.|||+|.+|- ..=...-|..+..+|+...+-. +.++-.+..
T Consensus 354 ehl~~~~~~DI--~LDT~p~nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~ElIA~-------s~~eYv~~A 424 (468)
T PF13844_consen 354 EHLRRYQLADI--CLDTFPYNGGTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPELIAD-------SEEEYVEIA 424 (468)
T ss_dssp HHHHHGGG-SE--EE--SSS--SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGGB-S-------SHHHHHHHH
T ss_pred HHHHHhhhCCE--EeeCCCCCCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchhcCC-------CHHHHHHHH
Confidence 543 33444 65 56788999999999999999993 3344556677888899876533 555544444
Q ss_pred HHHhcccchHHHHHHHH-HHHHHhccc--CChHHHHHHHHHHHH
Q 011765 423 RLVLVEEKGQIYRDKAK-EMKGLFGDK--GRHDRYVDNFLNYLK 463 (478)
Q Consensus 423 ~~ll~~~~~~~~~~~a~-~~~~~~~~~--~~~~~~~~~i~~~~~ 463 (478)
.++-+ |.+++++.+ ++++.+... -...+.+..+++.++
T Consensus 425 v~La~---D~~~l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~ 465 (468)
T PF13844_consen 425 VRLAT---DPERLRALRAKLRDRRSKSPLFDPKRFARNLEAAYR 465 (468)
T ss_dssp HHHHH----HHHHHHHHHHHHHHHHHSGGG-HHHHHHHHHHHHH
T ss_pred HHHhC---CHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHH
Confidence 45555 455444433 333333222 222445555665554
|
|
| >PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.039 Score=56.27 Aligned_cols=65 Identities=18% Similarity=0.192 Sum_probs=48.2
Q ss_pred CCcEEEeccCCh-hhhhcCCCceeeee---ccC-hhhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeecc
Q 011765 337 GRGVVYTSWAPQ-LAILAHDSVGGFLT---HAG-WSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRD 407 (478)
Q Consensus 337 ~~n~~~~~~vpq-~~vL~~~~~~~~It---HgG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~ 407 (478)
.+++.+..|..+ ..++..+++ ||. .-| -+++.||+++|+|+|+... ..+...+.+-..|..++..
T Consensus 454 ~d~V~FlG~~~Dv~~~LaaADV--fVlPS~~EGfp~vlLEAMA~GlPVVATdv----GG~~EiV~dG~nG~LVp~~ 523 (578)
T PRK15490 454 LERILFVGASRDVGYWLQKMNV--FILFSRYEGLPNVLIEAQMVGVPVISTPA----GGSAECFIEGVSGFILDDA 523 (578)
T ss_pred CCcEEECCChhhHHHHHHhCCE--EEEcccccCccHHHHHHHHhCCCEEEeCC----CCcHHHcccCCcEEEECCC
Confidence 357888888655 457888888 775 345 4799999999999998654 4566667777788888765
|
|
| >PRK10017 colanic acid biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.078 Score=53.00 Aligned_cols=168 Identities=11% Similarity=0.101 Sum_probs=97.3
Q ss_pred HhhhcccCCCCceEEEEeCcccCC------CH----HHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCCC--CChhhhhh
Q 011765 267 IKEWLDEQEKGSVVYVAFGSEAKP------SQ----EELTEIALGLELSKLPFFWVLKKRLGQADTEPIE--LPDGFEER 334 (478)
Q Consensus 267 ~~~~l~~~~~~~~v~vs~Gs~~~~------~~----~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~--~p~~~~~~ 334 (478)
+..|+....+++.|-||.-..... .. +.+.++++.+...+++++++-...... .....+ .-..+.+.
T Consensus 224 ~~~~~~~~~~~~~Vgisvr~~~~~~~~~~~~~~~Y~~~la~~i~~Li~~g~~Vv~lp~~~~~~-~~~~dD~~~~~~l~~~ 302 (426)
T PRK10017 224 VQHWLDVAAQQKTVAITLRELAPFDKRLGTTQQAYEKAFAGVVNRIIDEGYQVIALSTCTGID-SYNKDDRMVALNLRQH 302 (426)
T ss_pred hhhhhcccccCCEEEEEecccccccccccccHHHHHHHHHHHHHHHHHCCCeEEEEecccCcc-CCCCchHHHHHHHHHh
Confidence 345655444456888886543311 11 334445555555688877654221000 000111 11223333
Q ss_pred cCC-CcEE--EeccCCh--hhhhcCCCceeeeeccChhhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEE-eeccC
Q 011765 335 TRG-RGVV--YTSWAPQ--LAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVEL-IPRDE 408 (478)
Q Consensus 335 ~~~-~n~~--~~~~vpq--~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~-l~~~~ 408 (478)
+.. .++. ..++-+. ..+++++++ +|..= +=++.-|+.+|||++++++ | +.....+...|...+ .+..+
T Consensus 303 ~~~~~~~~vi~~~~~~~e~~~iIs~~dl--~ig~R-lHa~I~a~~~gvP~i~i~Y--~-~K~~~~~~~lg~~~~~~~~~~ 376 (426)
T PRK10017 303 VSDPARYHVVMDELNDLEMGKILGACEL--TVGTR-LHSAIISMNFGTPAIAINY--E-HKSAGIMQQLGLPEMAIDIRH 376 (426)
T ss_pred cccccceeEecCCCChHHHHHHHhhCCE--EEEec-chHHHHHHHcCCCEEEeee--h-HHHHHHHHHcCCccEEechhh
Confidence 332 2222 2223333 367877877 88432 2347788999999999998 2 555556688888877 66666
Q ss_pred CCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhcc
Q 011765 409 GDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFGD 447 (478)
Q Consensus 409 ~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~ 447 (478)
++.++|.+.+.+++++ -++++++.++--+..+.
T Consensus 377 ----l~~~~Li~~v~~~~~~--r~~~~~~l~~~v~~~r~ 409 (426)
T PRK10017 377 ----LLDGSLQAMVADTLGQ--LPALNARLAEAVSRERQ 409 (426)
T ss_pred ----CCHHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHH
Confidence 8999999999999994 35677776666665544
|
|
| >COG1817 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.014 Score=53.95 Aligned_cols=112 Identities=19% Similarity=0.182 Sum_probs=72.9
Q ss_pred cEEEE-ecCCCccCHHHHHHHHHHHHhCCCeEEEEeCC--CccccCCCCCCCCCCCeEEEEecCCCCCCCCCCccccCCC
Q 011765 7 LQIAM-FPWLAFGHMIPWLELAKLIAQKGHKIFFISTP--RNIDRLPRLPQNLASMIQFVKISLPHVDNLRENAEATIDL 83 (478)
Q Consensus 7 ~~il~-~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~--~~~~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~~~~~ 83 (478)
|||.| +..+ -|+--+..|...|.++||+|.+-+-+ ...+.+...| +.+..|. .. +.
T Consensus 1 mkVwiDI~n~--~hvhfFk~lI~elekkG~ev~iT~rd~~~v~~LLd~yg------f~~~~Ig----k~---g~------ 59 (346)
T COG1817 1 MKVWIDIGNP--PHVHFFKNLIWELEKKGHEVLITCRDFGVVTELLDLYG------FPYKSIG----KH---GG------ 59 (346)
T ss_pred CeEEEEcCCc--chhhHHHHHHHHHHhCCeEEEEEEeecCcHHHHHHHhC------CCeEeec----cc---CC------
Confidence 45544 3333 46667899999999999999887643 3334455555 7777774 11 00
Q ss_pred ChhHHHHHHHHHhhhhHHHHHHHhhcCCCEEEEcCCcccHHHHHHHhCCCeEEEecchH
Q 011765 84 PYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAAYWLPARARELGIPSGFFSIFTA 142 (478)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~ 142 (478)
.+..+.+...... .-.|-++..+.+||+.+. -.++.+..+|.-+|+|.|.+....-
T Consensus 60 -~tl~~Kl~~~~eR-~~~L~ki~~~~kpdv~i~-~~s~~l~rvafgLg~psIi~~D~eh 115 (346)
T COG1817 60 -VTLKEKLLESAER-VYKLSKIIAEFKPDVAIG-KHSPELPRVAFGLGIPSIIFVDNEH 115 (346)
T ss_pred -ccHHHHHHHHHHH-HHHHHHHHhhcCCceEee-cCCcchhhHHhhcCCceEEecCChh
Confidence 0011112222111 226778888999999999 5677899999999999999866443
|
|
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.15 Score=55.28 Aligned_cols=118 Identities=9% Similarity=0.028 Sum_probs=67.9
Q ss_pred CcEEEeccCChh---hhhcCCCceeeeec---cC-hhhHHHHHHhCCcEecccccc--chhhH--HHHH-hhcCeEEEee
Q 011765 338 RGVVYTSWAPQL---AILAHDSVGGFLTH---AG-WSSVVEALQFGMPLIVLTCYA--DQGLN--AKLL-EEKQIVELIP 405 (478)
Q Consensus 338 ~n~~~~~~vpq~---~vL~~~~~~~~ItH---gG-~~s~~eal~~GvP~l~~P~~~--DQ~~n--a~~v-~~~g~G~~l~ 405 (478)
+++.+..+.+.. .+++.+++ ||.- =| -.+.+||+++|+|+|+....+ |.-.+ ...+ .+-+-|...+
T Consensus 837 drV~FlG~~de~lah~IYAaADI--FLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~ 914 (977)
T PLN02939 837 NNIRLILKYDEALSHSIYAASDM--FIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFL 914 (977)
T ss_pred CeEEEEeccCHHHHHHHHHhCCE--EEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEEec
Confidence 467777777764 47777777 7742 22 257999999999999876543 21110 1111 1224577666
Q ss_pred ccCCCCcccHHHHHHHHHHHhcc-cchHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHhc
Q 011765 406 RDEGDGFFTRNSVAESLRLVLVE-EKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLKNH 465 (478)
Q Consensus 406 ~~~~~~~~~~~~l~~~i~~ll~~-~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~ 465 (478)
.. +++.|..+|.+++.. ..++..++++.+ +.+...-+-+..++..++.++..
T Consensus 915 ~~------D~eaLa~AL~rAL~~~~~dpe~~~~L~~--~am~~dFSWe~~A~qYeeLY~~l 967 (977)
T PLN02939 915 TP------DEQGLNSALERAFNYYKRKPEVWKQLVQ--KDMNIDFSWDSSASQYEELYQRA 967 (977)
T ss_pred CC------CHHHHHHHHHHHHHHhccCHHHHHHHHH--HHHHhcCCHHHHHHHHHHHHHHH
Confidence 53 788888888887640 004454444432 11222333456666666666544
|
|
| >PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.00061 Score=56.44 Aligned_cols=126 Identities=21% Similarity=0.240 Sum_probs=67.5
Q ss_pred eEEEEeCcccC-CCHHHHHH-HHHHHHhCCCCEEEEEecCCCCCCCCCCCCChhhhhhcCCCcEEEeccCCh-hhhhcCC
Q 011765 279 VVYVAFGSEAK-PSQEELTE-IALGLELSKLPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQ-LAILAHD 355 (478)
Q Consensus 279 ~v~vs~Gs~~~-~~~~~~~~-~~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~n~~~~~~vpq-~~vL~~~ 355 (478)
+.++++|+... .+.+.+.+ +++.+.+...++-+.+-+. .|+.+.+. ..+|+.+..|++. .++++.+
T Consensus 3 ~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~l~i~G~----------~~~~l~~~-~~~~v~~~g~~~e~~~~l~~~ 71 (135)
T PF13692_consen 3 LYIGYLGRIRPDKGLEELIEAALERLKEKHPDIELIIIGN----------GPDELKRL-RRPNVRFHGFVEELPEILAAA 71 (135)
T ss_dssp EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEEEEEECE----------SS-HHCCH-HHCTEEEE-S-HHHHHHHHC-
T ss_pred ccccccccccccccccchhhhHHHHHHHHCcCEEEEEEeC----------CHHHHHHh-cCCCEEEcCCHHHHHHHHHhC
Confidence 44555666553 23343444 5555654333444444322 11222221 2348999999865 4578888
Q ss_pred Cceeeeec--cC-hhhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeeccCCCCcccHHHHHHHHHHHhc
Q 011765 356 SVGGFLTH--AG-WSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLV 427 (478)
Q Consensus 356 ~~~~~ItH--gG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~ 427 (478)
++.+..+. .| .+++.|++++|+|+|+.+. .....++..+.|..+ .. +++++.++|+++++
T Consensus 72 dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~-----~~~~~~~~~~~~~~~--~~-----~~~~l~~~i~~l~~ 134 (135)
T PF13692_consen 72 DVGLIPSRFNEGFPNKLLEAMAAGKPVIASDN-----GAEGIVEEDGCGVLV--AN-----DPEELAEAIERLLN 134 (135)
T ss_dssp SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHH-----HCHCHS---SEEEE---TT------HHHHHHHHHHHHH
T ss_pred CEEEEEeeCCCcCcHHHHHHHHhCCCEEECCc-----chhhheeecCCeEEE--CC-----CHHHHHHHHHHHhc
Confidence 88655442 23 4899999999999999766 123344446888877 33 89999999999987
|
|
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.004 Score=63.71 Aligned_cols=93 Identities=19% Similarity=0.256 Sum_probs=65.9
Q ss_pred CCcEEEeccCChhhhhcCCCceeeeec----cChhhHHHHHHhCCcEeccccccchhhHHHHHhhc------CeEEEeec
Q 011765 337 GRGVVYTSWAPQLAILAHDSVGGFLTH----AGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEK------QIVELIPR 406 (478)
Q Consensus 337 ~~n~~~~~~vpq~~vL~~~~~~~~ItH----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~------g~G~~l~~ 406 (478)
.+++.+.....-.+++..+++ +|.- |--+++.||+++|+|+|+. |.......+.+. ..|..++.
T Consensus 353 ~~~V~f~G~~~v~~~l~~aDv--~vlpS~~Eg~p~~vlEAma~G~PVVat----d~g~~~elv~~~~~~~~g~~G~lv~~ 426 (475)
T cd03813 353 EDNVKFTGFQNVKEYLPKLDV--LVLTSISEGQPLVILEAMAAGIPVVAT----DVGSCRELIEGADDEALGPAGEVVPP 426 (475)
T ss_pred CCeEEEcCCccHHHHHHhCCE--EEeCchhhcCChHHHHHHHcCCCEEEC----CCCChHHHhcCCcccccCCceEEECC
Confidence 357877775555778888887 6532 3347999999999999994 444455555552 26777765
Q ss_pred cCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHH
Q 011765 407 DEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGL 444 (478)
Q Consensus 407 ~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~ 444 (478)
. +.++++++|.++++ |++.++++.+-+..
T Consensus 427 ~------d~~~la~ai~~ll~---~~~~~~~~~~~a~~ 455 (475)
T cd03813 427 A------DPEALARAILRLLK---DPELRRAMGEAGRK 455 (475)
T ss_pred C------CHHHHHHHHHHHhc---CHHHHHHHHHHHHH
Confidence 3 78999999999999 77666665544443
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.0072 Score=58.32 Aligned_cols=108 Identities=13% Similarity=0.018 Sum_probs=67.0
Q ss_pred EEEEecCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCCccccCCCCCCCCCCCeE-EEEecCCCCCCCCCCccccCCCC
Q 011765 8 QIAMFPWLAFGHMIPWLELAKLIAQK--GHKIFFISTPRNIDRLPRLPQNLASMIQ-FVKISLPHVDNLRENAEATIDLP 84 (478)
Q Consensus 8 ~il~~~~~~~gH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~~~~~g~~~~~~i~-~~~i~~~~~~~l~~~~~~~~~~~ 84 (478)
|||++-....|++.-+..+.++|+++ +.+|++++.+.+.+.++.. +.+. +..++. . . ... .
T Consensus 1 ~ILiir~~~iGD~vl~~p~l~~Lr~~~P~a~I~~l~~~~~~~~~~~~-----p~vd~v~~~~~----~--~--~~~-~-- 64 (319)
T TIGR02193 1 RILIVKTSSLGDVIHTLPALTDIKRALPDVEIDWVVEEGFADIVRLH-----PAVDEVIPVAL----R--R--WRK-T-- 64 (319)
T ss_pred CEEEEecccHHHHHHHHHHHHHHHHhCCCCEEEEEEChhHhhhhhcC-----CCccEEEEech----h--h--hhh-c--
Confidence 68999999999999999999999998 9999999999987776643 3343 344421 0 0 000 0
Q ss_pred hhHHHHHHHHHhhhhHHHHHHHhhcCCCEEEEcCCcccHHHHHHHhCCCeEE
Q 011765 85 YDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAAYWLPARARELGIPSGF 136 (478)
Q Consensus 85 ~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~~~~~~~A~~lgIP~i~ 136 (478)
.+..........+...+++.++|++|.-........++...+.+.+.
T Consensus 65 -----~~~~~~~~~~~~~~~~lr~~~yD~vi~~~~~~~s~~l~~~~~~~r~g 111 (319)
T TIGR02193 65 -----LFSAATWREIKALRALLRAERYDAVIDAQGLIKSALVARMARGPRHG 111 (319)
T ss_pred -----cccchhHHHHHHHHHHHhhccchhhhhhhhhHHHHHHHHhhCCceec
Confidence 00000001122344556778999998543333344566666644343
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0052 Score=51.13 Aligned_cols=103 Identities=13% Similarity=0.189 Sum_probs=68.0
Q ss_pred EEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCCCCCCCCccccCCCChhH
Q 011765 8 QIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVDNLRENAEATIDLPYDE 87 (478)
Q Consensus 8 ~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~~~~~~~~~ 87 (478)
|||+++.....| ...+++.|.++||+|++++.....+.... ..++.+..++. . . ...
T Consensus 1 KIl~i~~~~~~~---~~~~~~~L~~~g~~V~ii~~~~~~~~~~~-----~~~i~~~~~~~----~------~--k~~--- 57 (139)
T PF13477_consen 1 KILLIGNTPSTF---IYNLAKELKKRGYDVHIITPRNDYEKYEI-----IEGIKVIRLPS----P------R--KSP--- 57 (139)
T ss_pred CEEEEecCcHHH---HHHHHHHHHHCCCEEEEEEcCCCchhhhH-----hCCeEEEEecC----C------C--Ccc---
Confidence 578887777666 45779999999999999999655432221 13377777742 1 0 001
Q ss_pred HHHHHHHHhhhhHHHHHHHhhcCCCEEEEcCCcc---cHHHHHHHhC-CCeEEEec
Q 011765 88 VKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAAY---WLPARARELG-IPSGFFSI 139 (478)
Q Consensus 88 ~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~~---~~~~~A~~lg-IP~i~~~~ 139 (478)
+..+ . +. .+..++++.+||+|.+....+ .+..++...+ +|+|....
T Consensus 58 ~~~~----~-~~-~l~k~ik~~~~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~~h 107 (139)
T PF13477_consen 58 LNYI----K-YF-RLRKIIKKEKPDVIHCHTPSPYGLFAMLAKKLLKNKKVIYTVH 107 (139)
T ss_pred HHHH----H-HH-HHHHHhccCCCCEEEEecCChHHHHHHHHHHHcCCCCEEEEec
Confidence 1121 1 23 778889999999998776543 2445678888 89986544
|
|
| >PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.38 Score=45.98 Aligned_cols=59 Identities=29% Similarity=0.225 Sum_probs=41.9
Q ss_pred ChhhhhcCCCceeeeeccChhhHHHHHHhCCcEeccccccchhh----HHHHHhhcCeEEEeecc
Q 011765 347 PQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQGL----NAKLLEEKQIVELIPRD 407 (478)
Q Consensus 347 pq~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~----na~~v~~~g~G~~l~~~ 407 (478)
|....|+.++. ++||-=-.+-+.||+..|+|+.++|.-. +.. -.+.+++.|+-..++..
T Consensus 221 Py~~~La~ad~-i~VT~DSvSMvsEA~~tG~pV~v~~l~~-~~~r~~r~~~~L~~~g~~r~~~~~ 283 (311)
T PF06258_consen 221 PYLGFLAAADA-IVVTEDSVSMVSEAAATGKPVYVLPLPG-RSGRFRRFHQSLEERGAVRPFTGW 283 (311)
T ss_pred cHHHHHHhCCE-EEEcCccHHHHHHHHHcCCCEEEecCCC-cchHHHHHHHHHHHCCCEEECCCc
Confidence 56778888887 3555555689999999999999999876 322 23345556776666554
|
The function of this family is unknown. |
| >PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.0042 Score=52.58 Aligned_cols=96 Identities=19% Similarity=0.191 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCCCCCCCCccccCCCChhHHHHHHHHHhhhhH
Q 011765 21 IPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVDNLRENAEATIDLPYDEVKYLKQSFDCLEE 100 (478)
Q Consensus 21 ~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (478)
.-+..|+++|.++||+|++++.......-+.. ..++.+..++.+.... .... . . ...
T Consensus 5 ~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~------~~~~-~----~--------~~~ 61 (160)
T PF13579_consen 5 RYVRELARALAARGHEVTVVTPQPDPEDDEEE----EDGVRVHRLPLPRRPW------PLRL-L----R--------FLR 61 (160)
T ss_dssp HHHHHHHHHHHHTT-EEEEEEE---GGG-SEE----ETTEEEEEE--S-SSS------GGGH-C----C--------HHH
T ss_pred HHHHHHHHHHHHCCCEEEEEecCCCCcccccc----cCCceEEeccCCccch------hhhh-H----H--------HHH
Confidence 34688999999999999999976655532211 1348888876422210 0000 0 0 112
Q ss_pred HHHHHH--hhcCCCEEEEcCCcc-cHHHHHH-HhCCCeEEEec
Q 011765 101 PMAKLL--QSLAPDWLLFDFAAY-WLPARAR-ELGIPSGFFSI 139 (478)
Q Consensus 101 ~l~~ll--~~~~pD~vI~D~~~~-~~~~~A~-~lgIP~i~~~~ 139 (478)
.+.+++ +..+||+|.+..... ....+++ ..++|+|....
T Consensus 62 ~~~~~l~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~p~v~~~h 104 (160)
T PF13579_consen 62 RLRRLLAARRERPDVVHAHSPTAGLVAALARRRRGIPLVVTVH 104 (160)
T ss_dssp HHHHHCHHCT---SEEEEEHHHHHHHHHHHHHHHT--EEEE-S
T ss_pred HHHHHHhhhccCCeEEEecccchhHHHHHHHHccCCcEEEEEC
Confidence 445555 778999998876332 2233444 88999998754
|
|
| >PRK10422 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.13 Score=50.32 Aligned_cols=107 Identities=14% Similarity=0.086 Sum_probs=70.0
Q ss_pred CccEEEEecCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCCccccCCCCCCCCCCCeE-EEEecCCCCCCCCCCccccC
Q 011765 5 SKLQIAMFPWLAFGHMIPWLELAKLIAQK--GHKIFFISTPRNIDRLPRLPQNLASMIQ-FVKISLPHVDNLRENAEATI 81 (478)
Q Consensus 5 ~~~~il~~~~~~~gH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~~~~~g~~~~~~i~-~~~i~~~~~~~l~~~~~~~~ 81 (478)
.+||||++-....|++.-+..+.++|+++ +.+|++++.+.+.+.++.. |.+. ++.++ . .
T Consensus 4 ~~~~ILii~~~~iGD~vl~~P~l~~Lk~~~P~a~I~~l~~~~~~~l~~~~-----P~id~vi~~~-----~---~----- 65 (352)
T PRK10422 4 PFRRILIIKMRFHGDMLLTTPVISSLKKNYPDAKIDVLLYQDTIPILSEN-----PEINALYGIK-----N---K----- 65 (352)
T ss_pred CCceEEEEEecccCceeeHHHHHHHHHHHCCCCeEEEEeccChHHHhccC-----CCceEEEEec-----c---c-----
Confidence 36899999999999999999999999997 8999999999888766543 3343 22222 0 0
Q ss_pred CCChhHHHHHHHHHhhhhHHHHHHHhhcCCCEEEEcCCcccHHHHHHHhCCCeEE
Q 011765 82 DLPYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAAYWLPARARELGIPSGF 136 (478)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~~~~~~~A~~lgIP~i~ 136 (478)
.... ...+ .... .+...+++.++|++|.-........++...|.|...
T Consensus 66 ~~~~--~~~~----~~~~-~l~~~lr~~~yD~vidl~~~~~s~ll~~l~~a~~ri 113 (352)
T PRK10422 66 KAGA--SEKI----KNFF-SLIKVLRANKYDLIVNLTDQWMVALLVRLLNARVKI 113 (352)
T ss_pred cccH--HHHH----HHHH-HHHHHHhhCCCCEEEEcccchHHHHHHHHhCCCeEE
Confidence 0000 0000 1111 233456677999999654444455667777877654
|
|
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.14 Score=49.55 Aligned_cols=107 Identities=12% Similarity=0.111 Sum_probs=65.0
Q ss_pred cCChhh---hhcCCCceeee--ec-cC-hhhHHHHHHhCCcEeccccccchhhHHHHHhhc-------------------
Q 011765 345 WAPQLA---ILAHDSVGGFL--TH-AG-WSSVVEALQFGMPLIVLTCYADQGLNAKLLEEK------------------- 398 (478)
Q Consensus 345 ~vpq~~---vL~~~~~~~~I--tH-gG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~------------------- 398 (478)
++|..+ +++.+++ || ++ .| -.++.||+++|+|+|+.-..+ ....+.+-
T Consensus 197 ~v~~~~l~~~y~~aDv--~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg----~~E~i~~~~ng~lv~~~~~~~~~~~~~ 270 (331)
T PHA01630 197 PLPDDDIYSLFAGCDI--LFYPVRGGAFEIPVIEALALGLDVVVTEKGA----WSEWVLSNLDVYWIKSGRKPKLWYTNP 270 (331)
T ss_pred cCCHHHHHHHHHhCCE--EEECCccccCChHHHHHHHcCCCEEEeCCCC----chhhccCCCceEEeeecccccccccCC
Confidence 466544 5777888 65 33 33 368999999999999976532 11122221
Q ss_pred -CeEEEeeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHh
Q 011765 399 -QIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLKN 464 (478)
Q Consensus 399 -g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~ 464 (478)
++|..++ .+.+++.+++.+++.+..++.++++++.-++...+.-+-++.++.+++.+++
T Consensus 271 ~~~G~~v~-------~~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~~ 330 (331)
T PHA01630 271 IHVGYFLD-------PDIEDAYQKLLEALANWTPEKKKENLEGRAILYRENYSYNAIAKMWEKILEK 330 (331)
T ss_pred cccccccC-------CCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 2344332 2567778888888873111566666666555555555556677777776643
|
|
| >TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.28 Score=47.87 Aligned_cols=106 Identities=13% Similarity=0.068 Sum_probs=69.6
Q ss_pred EEEEecCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCCccccCCCCCCCCCCCeE-EEEecCCCCCCCCCCccccCCCC
Q 011765 8 QIAMFPWLAFGHMIPWLELAKLIAQK--GHKIFFISTPRNIDRLPRLPQNLASMIQ-FVKISLPHVDNLRENAEATIDLP 84 (478)
Q Consensus 8 ~il~~~~~~~gH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~~~~~g~~~~~~i~-~~~i~~~~~~~l~~~~~~~~~~~ 84 (478)
|||++-..+.|++.-+..+.++|+++ +.+|++++.+.+.+.++.. +.+. +..++ .. . . ...
T Consensus 1 rILii~~~~iGD~vl~tp~l~~Lk~~~P~a~I~~l~~~~~~~l~~~~-----p~vd~vi~~~----~~----~-~--~~~ 64 (344)
T TIGR02201 1 RILLIKLRHHGDMLLTTPVISSLKKNYPDAKIDVLLYQETIPILSEN-----PDINALYGLD----RK----K-A--KAG 64 (344)
T ss_pred CEEEEEeccccceeeHHHHHHHHHHHCCCCEEEEEECcChHHHHhcC-----CCccEEEEeC----hh----h-h--cch
Confidence 68999999999999999999999997 8999999999888766543 3343 23332 00 0 0 000
Q ss_pred hhHHHHHHHHHhhhhHHHHHHHhhcCCCEEEEcCCcccHHHHHHHhCCCeEEE
Q 011765 85 YDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAAYWLPARARELGIPSGFF 137 (478)
Q Consensus 85 ~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~~~~~~~A~~lgIP~i~~ 137 (478)
...+ ..+. .+...+++.++|++|.-.....+..++...|.|.-.-
T Consensus 65 ---~~~~----~~~~-~l~~~lr~~~yD~vidl~~~~~s~ll~~l~~a~~riG 109 (344)
T TIGR02201 65 ---ERKL----ANQF-HLIKVLRANRYDLVVNLTDQWMVAILVKLLNARVKIG 109 (344)
T ss_pred ---HHHH----HHHH-HHHHHHHhCCCCEEEECCcchHHHHHHHhcCCCeEEe
Confidence 0000 1111 2334456779999996654555677888889886543
|
This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II. |
| >PHA01633 putative glycosyl transferase group 1 | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.22 Score=48.00 Aligned_cols=100 Identities=17% Similarity=0.183 Sum_probs=60.4
Q ss_pred CcEEEe---ccCChh---hhhcCCCceeeeec---cCh-hhHHHHHHhCCcEecccc------ccch------hhHHHHH
Q 011765 338 RGVVYT---SWAPQL---AILAHDSVGGFLTH---AGW-SSVVEALQFGMPLIVLTC------YADQ------GLNAKLL 395 (478)
Q Consensus 338 ~n~~~~---~~vpq~---~vL~~~~~~~~ItH---gG~-~s~~eal~~GvP~l~~P~------~~DQ------~~na~~v 395 (478)
+++.+. .++++. ++++.+++ ||.- =|+ .++.||+++|+|+|+.-. .+|+ .++..-.
T Consensus 201 ~~V~f~g~~G~~~~~dl~~~y~~aDi--fV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~ 278 (335)
T PHA01633 201 ANVHFVAEFGHNSREYIFAFYGAMDF--TIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVEEY 278 (335)
T ss_pred CcEEEEecCCCCCHHHHHHHHHhCCE--EEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHHHh
Confidence 367766 455554 46677777 7742 344 689999999999998643 2332 2223222
Q ss_pred h--hcCeEEEeeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHh
Q 011765 396 E--EKQIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLF 445 (478)
Q Consensus 396 ~--~~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~ 445 (478)
. +.|.|...+. .++++++++|.++++..+.+....++++.++.+
T Consensus 279 ~~~~~g~g~~~~~------~d~~~la~ai~~~~~~~~~~~~~~~~~~~a~~f 324 (335)
T PHA01633 279 YDKEHGQKWKIHK------FQIEDMANAIILAFELQDREERSMKLKELAKKY 324 (335)
T ss_pred cCcccCceeeecC------CCHHHHHHHHHHHHhccChhhhhHHHHHHHHhc
Confidence 2 3466666654 599999999999966221122233444444444
|
|
| >PF06722 DUF1205: Protein of unknown function (DUF1205); InterPro: IPR010610 This entry represents a conserved region of unknown function within bacterial glycosyl transferases | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.0066 Score=46.76 Aligned_cols=61 Identities=23% Similarity=0.264 Sum_probs=48.1
Q ss_pred hHhhhcccCCCCceEEEEeCcccCC---CH--HHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCCCCCh
Q 011765 266 SIKEWLDEQEKGSVVYVAFGSEAKP---SQ--EELTEIALGLELSKLPFFWVLKKRLGQADTEPIELPD 329 (478)
Q Consensus 266 ~~~~~l~~~~~~~~v~vs~Gs~~~~---~~--~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~ 329 (478)
.+..|+-..+++|.|+||+||.... .. ..+..++++++.++..++..+...... ....+|+
T Consensus 29 ~~P~Wl~~~~~RpRVcvT~G~~~~~~~g~~~~~~l~~ll~ala~ldvEvV~a~~~~~~~---~lg~lP~ 94 (97)
T PF06722_consen 29 VVPDWLLEPPGRPRVCVTLGTSVRMFFGPGGVPLLRRLLEALAGLDVEVVVALPAAQRA---ELGELPD 94 (97)
T ss_dssp EEEGGGSSSTSSEEEEEEETHHHCHHHSCHHHCHHHHHHHHHHTSSSEEEEEETTCCCG---GCCS-TT
T ss_pred CCCcccccCCCCCEEEEEcCCCccccccccchHHHHHHHHHHhhCCcEEEEECCHHHHH---hhCCCCC
Confidence 3677999999999999999998863 22 478889999999999999998866432 4456776
|
Many proteins containing this domain are members of the glycosyl transferase family 28 IPR004276 from INTERPRO.; PDB: 3OTH_A 3OTG_A 3OTI_A 3D0R_A 3D0Q_B 2P6P_A 3UYK_A 3UYL_B 3TSA_B 2YJN_A. |
| >PRK14098 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.083 Score=54.15 Aligned_cols=170 Identities=9% Similarity=-0.020 Sum_probs=88.9
Q ss_pred ceEEEEeCcccC-CCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCCCCChhhhhhc--CCCcEEEeccCChh---hh
Q 011765 278 SVVYVAFGSEAK-PSQEELTEIALGLELSKLPFFWVLKKRLGQADTEPIELPDGFEERT--RGRGVVYTSWAPQL---AI 351 (478)
Q Consensus 278 ~~v~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~--~~~n~~~~~~vpq~---~v 351 (478)
.++++..|.... ...+.+.+.+..+.+.+.+++++-.+. ...-+.+.+.. ..+++.+..+++.. .+
T Consensus 307 ~~~i~~vgRl~~~KG~d~li~a~~~l~~~~~~lvivG~G~--------~~~~~~l~~l~~~~~~~V~~~g~~~~~~~~~~ 378 (489)
T PRK14098 307 TPLVGVIINFDDFQGAELLAESLEKLVELDIQLVICGSGD--------KEYEKRFQDFAEEHPEQVSVQTEFTDAFFHLA 378 (489)
T ss_pred CCEEEEeccccccCcHHHHHHHHHHHHhcCcEEEEEeCCC--------HHHHHHHHHHHHHCCCCEEEEEecCHHHHHHH
Confidence 356667777663 223444444444443455554443211 00111222111 13578777777764 57
Q ss_pred hcCCCceeeeec---cCh-hhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeeccCCCCcccHHHHHHHHHHHhc
Q 011765 352 LAHDSVGGFLTH---AGW-SSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLV 427 (478)
Q Consensus 352 L~~~~~~~~ItH---gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~ 427 (478)
++.+++ |+.- =|. .+.+||+++|+|+|+....+-.........+.+.|...+.. +++.+.++|.++++
T Consensus 379 ~a~aDi--~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~~~~~~G~l~~~~------d~~~la~ai~~~l~ 450 (489)
T PRK14098 379 IAGLDM--LLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSEDKGSGFIFHDY------TPEALVAKLGEALA 450 (489)
T ss_pred HHhCCE--EEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeecCCCCCCceeEeCCC------CHHHHHHHHHHHHH
Confidence 777887 6632 122 37889999999988876533111100011123567777653 78999999998763
Q ss_pred ccchHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHhc
Q 011765 428 EEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLKNH 465 (478)
Q Consensus 428 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~ 465 (478)
--.+++..+++.+ +.+.+.-+-++.++..++.+++.
T Consensus 451 ~~~~~~~~~~~~~--~~~~~~fsw~~~a~~y~~lY~~~ 486 (489)
T PRK14098 451 LYHDEERWEELVL--EAMERDFSWKNSAEEYAQLYREL 486 (489)
T ss_pred HHcCHHHHHHHHH--HHhcCCCChHHHHHHHHHHHHHH
Confidence 1004333322221 11223333467777777776654
|
|
| >PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.11 Score=50.75 Aligned_cols=103 Identities=12% Similarity=0.027 Sum_probs=69.4
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCCccccCCCCCCCCCCCeEEE-EecCCCCCCCCCCccccCCC
Q 011765 7 LQIAMFPWLAFGHMIPWLELAKLIAQK--GHKIFFISTPRNIDRLPRLPQNLASMIQFV-KISLPHVDNLRENAEATIDL 83 (478)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~-~i~~~~~~~l~~~~~~~~~~ 83 (478)
||||++-..+.|++.-+..+.++|+++ +.+|++++.+...+.++.. |.+.-+ .++ .. . ..
T Consensus 1 mrILii~~~~iGD~il~tP~l~~Lk~~~P~a~I~~l~~~~~~~l~~~~-----P~vd~vi~~~--------~~-~---~~ 63 (348)
T PRK10916 1 MKILVIGPSWVGDMMMSQSLYRTLKARYPQAIIDVMAPAWCRPLLSRM-----PEVNEAIPMP--------LG-H---GA 63 (348)
T ss_pred CcEEEEccCcccHHHhHHHHHHHHHHHCCCCeEEEEechhhHHHHhcC-----CccCEEEecc--------cc-c---ch
Confidence 789999999999999999999999996 8999999998887766643 333321 111 00 0 00
Q ss_pred ChhHHHHHHHHHhhhhHHHHHHHhhcCCCEEEEcCCcccHHHHHHHhCCCeEE
Q 011765 84 PYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAAYWLPARARELGIPSGF 136 (478)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~~~~~~~A~~lgIP~i~ 136 (478)
. .+ .. ...+...+++.++|++|.=....-...++...|+|.-.
T Consensus 64 ~-----~~----~~-~~~l~~~lr~~~yD~vidl~~~~~s~~l~~~~~~~~ri 106 (348)
T PRK10916 64 L-----EI----GE-RRRLGHSLREKRYDRAYVLPNSFKSALVPFFAGIPHRT 106 (348)
T ss_pred h-----hh----HH-HHHHHHHHHhcCCCEEEECCCcHHHHHHHHHcCCCeEe
Confidence 0 00 00 11334556777999999765444556677777887654
|
|
| >COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=95.89 E-value=0.18 Score=50.80 Aligned_cols=134 Identities=17% Similarity=0.208 Sum_probs=88.1
Q ss_pred CCCceEEEEeCcccCCCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCCCCChhhh-----hhcCCCcEEEeccCChh
Q 011765 275 EKGSVVYVAFGSEAKPSQEELTEIALGLELSKLPFFWVLKKRLGQADTEPIELPDGFE-----ERTRGRGVVYTSWAPQL 349 (478)
Q Consensus 275 ~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~-----~~~~~~n~~~~~~vpq~ 349 (478)
+++-+||+|++...+..++.+..-+.=|+..+--++|...++++ ..+.+.+. +....+.+++.+-.|..
T Consensus 427 p~~avVf~c~~n~~K~~pev~~~wmqIL~~vP~Svl~L~~~~~~------~~~~~~l~~la~~~Gv~~eRL~f~p~~~~~ 500 (620)
T COG3914 427 PEDAVVFCCFNNYFKITPEVFALWMQILSAVPNSVLLLKAGGDD------AEINARLRDLAEREGVDSERLRFLPPAPNE 500 (620)
T ss_pred CCCeEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEecCCCc------HHHHHHHHHHHHHcCCChhheeecCCCCCH
Confidence 45669999999999999988777666676778888898876422 22222222 11224456665555543
Q ss_pred ---hhhcCCCceeee---eccChhhHHHHHHhCCcEeccccccchhh---HHHHHhhcCeEEEeeccCCCCcccHHHHHH
Q 011765 350 ---AILAHDSVGGFL---THAGWSSVVEALQFGMPLIVLTCYADQGL---NAKLLEEKQIVELIPRDEGDGFFTRNSVAE 420 (478)
Q Consensus 350 ---~vL~~~~~~~~I---tHgG~~s~~eal~~GvP~l~~P~~~DQ~~---na~~v~~~g~G~~l~~~~~~~~~~~~~l~~ 420 (478)
+=+..+++ |+ --||..|..|+|..|||||..+ ++|+- -+..+..+|+-..+-.+ .++-++.
T Consensus 501 ~h~a~~~iADl--vLDTyPY~g~TTa~daLwm~vPVlT~~--G~~FasR~~~si~~~agi~e~vA~s------~~dYV~~ 570 (620)
T COG3914 501 DHRARYGIADL--VLDTYPYGGHTTASDALWMGVPVLTRV--GEQFASRNGASIATNAGIPELVADS------RADYVEK 570 (620)
T ss_pred HHHHhhchhhe--eeecccCCCccchHHHHHhcCceeeec--cHHHHHhhhHHHHHhcCCchhhcCC------HHHHHHH
Confidence 33444666 77 5699999999999999999865 56653 34456666776666443 3455676
Q ss_pred HHHH
Q 011765 421 SLRL 424 (478)
Q Consensus 421 ~i~~ 424 (478)
+|+-
T Consensus 571 av~~ 574 (620)
T COG3914 571 AVAF 574 (620)
T ss_pred HHHh
Confidence 6643
|
|
| >TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.77 Score=44.50 Aligned_cols=102 Identities=14% Similarity=0.074 Sum_probs=67.1
Q ss_pred EEEEecCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCCccccCCCCCCCCCCCeEE-EEecCCCCCCCCCCccccCCCC
Q 011765 8 QIAMFPWLAFGHMIPWLELAKLIAQK--GHKIFFISTPRNIDRLPRLPQNLASMIQF-VKISLPHVDNLRENAEATIDLP 84 (478)
Q Consensus 8 ~il~~~~~~~gH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~~~~~g~~~~~~i~~-~~i~~~~~~~l~~~~~~~~~~~ 84 (478)
|||++-..+.|++.-+..+.++|++. +.+|++++.+...+.++.. +.++- ..++ ... . .
T Consensus 1 rILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~~~~-----p~id~v~~~~--------~~~----~-~ 62 (334)
T TIGR02195 1 KILVIGPSWVGDMVMAQSLYRLLKKRYPQAVIDVLAPAWCRPLLERM-----PEIRQAIDMP--------LGH----G-A 62 (334)
T ss_pred CEEEEccchhHHHHHHHHHHHHHHHHCCCCEEEEEechhhHHHHhcC-----chhceeeecC--------Ccc----c-c
Confidence 68999999999999999999999997 8999999988776665543 22321 1111 000 0 0
Q ss_pred hhHHHHHHHHHhhhhHHHHHHHhhcCCCEEEEcCCcccHHHHHHHhCCCeEE
Q 011765 85 YDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAAYWLPARARELGIPSGF 136 (478)
Q Consensus 85 ~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~~~~~~~A~~lgIP~i~ 136 (478)
.. . .. ...+...+++.++|++|.-........++...|+|.-.
T Consensus 63 ~~---~-----~~-~~~~~~~lr~~~yD~vi~l~~~~~s~ll~~~~~~~~ri 105 (334)
T TIGR02195 63 LE---L-----TE-RRRLGRSLREERYDQAIVLPNSLKSALIPFFAGIPHRT 105 (334)
T ss_pred hh---h-----hH-HHHHHHHHhhcCCCEEEECCCCHHHHHHHHHcCCCcee
Confidence 00 0 00 01334556777999999875555556677777887653
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional | Back alignment and domain information |
|---|
Probab=95.39 E-value=0.96 Score=43.61 Aligned_cols=44 Identities=9% Similarity=0.077 Sum_probs=40.1
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCCccccCC
Q 011765 7 LQIAMFPWLAFGHMIPWLELAKLIAQK--GHKIFFISTPRNIDRLP 50 (478)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~~~ 50 (478)
||||++-..+.|++.-+..+.+.|+++ +.+|++++.+.+.+.++
T Consensus 1 m~ILii~~~~iGD~v~~~p~~~~lk~~~P~a~I~~l~~~~~~~l~~ 46 (322)
T PRK10964 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIQFDWVVEEGFAQIPS 46 (322)
T ss_pred CeEEEEeccchHHHHhHHHHHHHHHHhCCCCEEEEEECHHHHHHHh
Confidence 799999999999999999999999997 99999999988776554
|
|
| >KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=95.36 E-value=0.2 Score=50.70 Aligned_cols=123 Identities=20% Similarity=0.235 Sum_probs=79.9
Q ss_pred CCCceEEEEeCcccCCCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCCCCChhhh-----hhcCCCcEEEeccCChh
Q 011765 275 EKGSVVYVAFGSEAKPSQEELTEIALGLELSKLPFFWVLKKRLGQADTEPIELPDGFE-----ERTRGRGVVYTSWAPQL 349 (478)
Q Consensus 275 ~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~-----~~~~~~n~~~~~~vpq~ 349 (478)
+++.+||.+|--..+.+++.+..-++-|+..+-.++|..+.... ++ ..|. -...++.+++.+-+.-.
T Consensus 756 p~d~vvf~~FNqLyKidP~~l~~W~~ILk~VPnS~LwllrfPa~------ge--~rf~ty~~~~Gl~p~riifs~va~k~ 827 (966)
T KOG4626|consen 756 PEDAVVFCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAV------GE--QRFRTYAEQLGLEPDRIIFSPVAAKE 827 (966)
T ss_pred CCCeEEEeechhhhcCCHHHHHHHHHHHHhCCcceeEEEecccc------ch--HHHHHHHHHhCCCccceeeccccchH
Confidence 45569999999999999999888888888888889999876521 00 1111 11123455555444432
Q ss_pred h-----hhcCCCceeeeeccChhhHHHHHHhCCcEeccccccc-hhhHHHHHhhcCeEEEeec
Q 011765 350 A-----ILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYAD-QGLNAKLLEEKQIVELIPR 406 (478)
Q Consensus 350 ~-----vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~D-Q~~na~~v~~~g~G~~l~~ 406 (478)
+ .|.--.++-+.|. |..|.++.|++|||||.+|.-.- -..-+-.+...|+|..+-+
T Consensus 828 eHvrr~~LaDv~LDTplcn-GhTTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~~Gl~hliak 889 (966)
T KOG4626|consen 828 EHVRRGQLADVCLDTPLCN-GHTTGMDVLWAGVPMVTMPGETLASRVAASLLTALGLGHLIAK 889 (966)
T ss_pred HHHHhhhhhhhcccCcCcC-CcccchhhhccCCceeecccHHHHHHHHHHHHHHcccHHHHhh
Confidence 2 2222223335665 68899999999999999996432 2333445677799985543
|
|
| >PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family | Back alignment and domain information |
|---|
Probab=95.26 E-value=0.12 Score=45.54 Aligned_cols=120 Identities=19% Similarity=0.192 Sum_probs=65.0
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCCCCCCCCccccCCCChh
Q 011765 7 LQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVDNLRENAEATIDLPYD 86 (478)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~~~~~~~~ 86 (478)
||||+..==+. +---+..|+++|.+.||+|+++.+...+.-....- .....++......+. +............+
T Consensus 1 M~ILlTNDDGi-~a~Gi~aL~~~L~~~g~~V~VvAP~~~~Sg~g~si-t~~~pl~~~~~~~~~-~~~~~~~~~v~GTP-- 75 (196)
T PF01975_consen 1 MRILLTNDDGI-DAPGIRALAKALSALGHDVVVVAPDSEQSGTGHSI-TLHKPLRVTEVEPGH-DPGGVEAYAVSGTP-- 75 (196)
T ss_dssp SEEEEE-SS-T-TSHHHHHHHHHHTTTSSEEEEEEESSSTTTSTTS---SSSEEEEEEEE-TT-CCSTTEEEEESS-H--
T ss_pred CeEEEEcCCCC-CCHHHHHHHHHHHhcCCeEEEEeCCCCCcCcceee-cCCCCeEEEEEEecc-cCCCCCEEEEcCcH--
Confidence 78888755554 44457889999977789999999998765432211 122234443331000 00001111111111
Q ss_pred HHHHHHHHHhhhhHHHHHHHhhcCCCEEEEcC----------Ccc---cHHHHHHHhCCCeEEEec
Q 011765 87 EVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDF----------AAY---WLPARARELGIPSGFFSI 139 (478)
Q Consensus 87 ~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~----------~~~---~~~~~A~~lgIP~i~~~~ 139 (478)
.+...-.+..++.+.+||+||+.. +.+ .|..-|...|||.|.++.
T Consensus 76 --------aDcv~~al~~~~~~~~pDLViSGiN~G~N~g~~v~~SGTVgAA~ea~~~GipaIA~S~ 133 (196)
T PF01975_consen 76 --------ADCVKLALDGLLPDKKPDLVISGINHGANLGTDVLYSGTVGAAMEAALRGIPAIAVSL 133 (196)
T ss_dssp --------HHHHHHHHHCTSTTSS-SEEEEEEEES---GGGGGG-HHHHHHHHHHHTTSEEEEEEE
T ss_pred --------HHHHHHHHHhhhccCCCCEEEECCCCCccCCcCcccccHHHHHHHHHHcCCCeEEEec
Confidence 122333555666666799999763 122 345567788999999866
|
This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A .... |
| >PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt | Back alignment and domain information |
|---|
Probab=95.23 E-value=1.4 Score=40.64 Aligned_cols=93 Identities=23% Similarity=0.171 Sum_probs=55.5
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCCCCCCCCccccCCCChh
Q 011765 7 LQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVDNLRENAEATIDLPYD 86 (478)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~~~~~~~~ 86 (478)
|||+++..-+.| ..||+.|.++|+ |++-+..++........ .+..... . ..+.
T Consensus 1 m~ILvlgGTtE~-----r~la~~L~~~g~-v~~sv~t~~g~~~~~~~---~~~~~v~-~---------------G~lg-- 53 (249)
T PF02571_consen 1 MKILVLGGTTEG-----RKLAERLAEAGY-VIVSVATSYGGELLKPE---LPGLEVR-V---------------GRLG-- 53 (249)
T ss_pred CEEEEEechHHH-----HHHHHHHHhcCC-EEEEEEhhhhHhhhccc---cCCceEE-E---------------CCCC--
Confidence 788887666555 579999999999 66555544443332110 0001111 0 0110
Q ss_pred HHHHHHHHHhhhhHHHHHHHhhcCCCEEEEcC--Ccc----cHHHHHHHhCCCeEEE
Q 011765 87 EVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDF--AAY----WLPARARELGIPSGFF 137 (478)
Q Consensus 87 ~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~--~~~----~~~~~A~~lgIP~i~~ 137 (478)
-.+.|.+++++.++|+||-=. |.. -+..+|+.+|||++.+
T Consensus 54 -----------~~~~l~~~l~~~~i~~vIDATHPfA~~is~na~~a~~~~~ipylR~ 99 (249)
T PF02571_consen 54 -----------DEEGLAEFLRENGIDAVIDATHPFAAEISQNAIEACRELGIPYLRF 99 (249)
T ss_pred -----------CHHHHHHHHHhCCCcEEEECCCchHHHHHHHHHHHHhhcCcceEEE
Confidence 123677778888999988332 211 2456789999999987
|
Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process |
| >COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=95.19 E-value=2.4 Score=38.62 Aligned_cols=77 Identities=18% Similarity=0.240 Sum_probs=44.9
Q ss_pred HHHHHHhCCCCEEEEEecCCCCCCCCCCCCChhhhhhcCCCcEEE-----eccCChhhhhcCCCceeeeecc-ChhhHHH
Q 011765 298 IALGLELSKLPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVY-----TSWAPQLAILAHDSVGGFLTHA-GWSSVVE 371 (478)
Q Consensus 298 ~~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~n~~~-----~~~vpq~~vL~~~~~~~~ItHg-G~~s~~e 371 (478)
+.+.+++.+-.|+..++.... ..+-.-+.........++ +++=|..+.|+.++. +|.-. ..|-..|
T Consensus 189 l~k~l~~~g~~~lisfSRRTp------~~~~s~l~~~l~s~~~i~w~~~d~g~NPY~~~La~Ady--ii~TaDSinM~sE 260 (329)
T COG3660 189 LVKILENQGGSFLISFSRRTP------DTVKSILKNNLNSSPGIVWNNEDTGYNPYIDMLAAADY--IISTADSINMCSE 260 (329)
T ss_pred HHHHHHhCCceEEEEeecCCc------HHHHHHHHhccccCceeEeCCCCCCCCchHHHHhhcce--EEEecchhhhhHH
Confidence 334456677788877765421 111111111122222222 134588899988877 65544 5588999
Q ss_pred HHHhCCcEecc
Q 011765 372 ALQFGMPLIVL 382 (478)
Q Consensus 372 al~~GvP~l~~ 382 (478)
|.+.|+|+.++
T Consensus 261 AasTgkPv~~~ 271 (329)
T COG3660 261 AASTGKPVFIL 271 (329)
T ss_pred HhccCCCeEEE
Confidence 99999999664
|
|
| >PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A | Back alignment and domain information |
|---|
Probab=95.05 E-value=0.24 Score=42.37 Aligned_cols=100 Identities=15% Similarity=0.076 Sum_probs=51.9
Q ss_pred ccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCCCCCCCCccccCCCChhHHHHHHHHHh
Q 011765 17 FGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVDNLRENAEATIDLPYDEVKYLKQSFD 96 (478)
Q Consensus 17 ~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (478)
.|--.-+..|+++|+++||+|++++.......... ...... ....... ... ... .
T Consensus 12 GG~e~~~~~l~~~l~~~G~~v~v~~~~~~~~~~~~---------~~~~~~----~~~~~~~----~~~-------~~~-~ 66 (177)
T PF13439_consen 12 GGAERVVLNLARALAKRGHEVTVVSPGVKDPIEEE---------LVKIFV----KIPYPIR----KRF-------LRS-F 66 (177)
T ss_dssp SHHHHHHHHHHHHHHHTT-EEEEEESS-TTS-SST---------EEEE-------TT-SST----SS---------HH-H
T ss_pred ChHHHHHHHHHHHHHHCCCEEEEEEcCCCccchhh---------ccceee----eeecccc----ccc-------chh-H
Confidence 36667799999999999999999987765443322 111111 0000000 000 000 1
Q ss_pred hhhHHHHHHHhhcCCCEEEEcCCcc-cHHHHHHHhCCCeEEEecchH
Q 011765 97 CLEEPMAKLLQSLAPDWLLFDFAAY-WLPARARELGIPSGFFSIFTA 142 (478)
Q Consensus 97 ~~~~~l~~ll~~~~pD~vI~D~~~~-~~~~~A~~lgIP~i~~~~~~~ 142 (478)
.....+.+++++.+||+|-...... +....+.. ++|.+.......
T Consensus 67 ~~~~~~~~~i~~~~~DiVh~~~~~~~~~~~~~~~-~~~~v~~~H~~~ 112 (177)
T PF13439_consen 67 FFMRRLRRLIKKEKPDIVHIHGPPAFWIALLACR-KVPIVYTIHGPY 112 (177)
T ss_dssp HHHHHHHHHHHHHT-SEEECCTTHCCCHHHHHHH-CSCEEEEE-HHH
T ss_pred HHHHHHHHHHHHcCCCeEEecccchhHHHHHhcc-CCCEEEEeCCCc
Confidence 1123566677777999995544332 23333333 999998876554
|
|
| >cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Probab=95.03 E-value=2.1 Score=43.58 Aligned_cols=101 Identities=14% Similarity=0.145 Sum_probs=60.6
Q ss_pred EeccCChhh---hhcCCCceeee---eccCh-hhHHHHHHhCCc----Eecccccc--chhhHHHHHhhcCeEEEeeccC
Q 011765 342 YTSWAPQLA---ILAHDSVGGFL---THAGW-SSVVEALQFGMP----LIVLTCYA--DQGLNAKLLEEKQIVELIPRDE 408 (478)
Q Consensus 342 ~~~~vpq~~---vL~~~~~~~~I---tHgG~-~s~~eal~~GvP----~l~~P~~~--DQ~~na~~v~~~g~G~~l~~~~ 408 (478)
+..++++.+ +++.+++ || .+-|+ .++.||+++|+| +|+.-+.+ ++ ..-|..++..
T Consensus 345 ~~g~v~~~el~~~y~~aDv--~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~---------~~~g~lv~p~- 412 (460)
T cd03788 345 LYRSLPREELAALYRAADV--ALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEE---------LSGALLVNPY- 412 (460)
T ss_pred EeCCCCHHHHHHHHHhccE--EEeCccccccCcccceeEEEecCCCceEEEeccccchhh---------cCCCEEECCC-
Confidence 345677755 4667777 66 34565 578999999999 55443322 22 1235666653
Q ss_pred CCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhcccCChHHHHHHHHHH
Q 011765 409 GDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNY 461 (478)
Q Consensus 409 ~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~ 461 (478)
+.++++++|.++++.. .++.+++.++..+.+. .-....-++.+++.
T Consensus 413 -----d~~~la~ai~~~l~~~-~~e~~~~~~~~~~~v~-~~~~~~w~~~~l~~ 458 (460)
T cd03788 413 -----DIDEVADAIHRALTMP-LEERRERHRKLREYVR-THDVQAWANSFLDD 458 (460)
T ss_pred -----CHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHH-hCCHHHHHHHHHHh
Confidence 7899999999999831 1344444455555543 34444444555443
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. |
| >COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=94.88 E-value=1.2 Score=43.23 Aligned_cols=106 Identities=16% Similarity=0.029 Sum_probs=72.5
Q ss_pred ccEEEEecCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCCCCCCCCccccCCC
Q 011765 6 KLQIAMFPWLAFGHMIPWLELAKLIAQK--GHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVDNLRENAEATIDL 83 (478)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~~~~~ 83 (478)
+||||++-....|++.=.+.+.+.|+++ +.++++++.+.+.+..... +.++-+.+ ...... +
T Consensus 1 ~~kIliir~~~iGD~vlt~p~~~~lk~~~P~a~i~~~~~~~~~~i~~~~-----p~I~~vi~---------~~~~~~-~- 64 (334)
T COG0859 1 MMKILVIRLSKLGDVVLTLPLLRTLKKAYPNAKIDVLVPKGFAPILKLN-----PEIDKVII---------IDKKKK-G- 64 (334)
T ss_pred CceEEEEeccchhHHHhHHHHHHHHHHHCCCCEEEEEeccchHHHHhcC-----hHhhhhcc---------cccccc-c-
Confidence 5899999999999999999999999998 5999999999988766543 21221111 000000 0
Q ss_pred ChhHHHHHHHHHhhhhHHHHHHHhhcCCCEEEEcCCcccHHHHHHHhCCCeEEE
Q 011765 84 PYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAAYWLPARARELGIPSGFF 137 (478)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~~~~~~~A~~lgIP~i~~ 137 (478)
.. -.-...+...+++.++|+||.=.-.+-...++..+++|.-.-
T Consensus 65 ---------~~-~~~~~~l~~~lr~~~yD~vidl~~~~ksa~l~~~~~~~~r~g 108 (334)
T COG0859 65 ---------LG-LKERLALLRTLRKERYDAVIDLQGLLKSALLALLLGIPFRIG 108 (334)
T ss_pred ---------cc-hHHHHHHHHHhhccCCCEEEECcccHHHHHHHHHhCCCcccc
Confidence 00 011224555667779999998766666777777888887754
|
|
| >cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS) | Back alignment and domain information |
|---|
Probab=94.84 E-value=1.6 Score=40.96 Aligned_cols=102 Identities=11% Similarity=0.090 Sum_probs=65.0
Q ss_pred EEEEecCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCCccccCCCCCCCCCCCeEE-EEecCCCCCCCCCCccccCCCC
Q 011765 8 QIAMFPWLAFGHMIPWLELAKLIAQK--GHKIFFISTPRNIDRLPRLPQNLASMIQF-VKISLPHVDNLRENAEATIDLP 84 (478)
Q Consensus 8 ~il~~~~~~~gH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~~~~~g~~~~~~i~~-~~i~~~~~~~l~~~~~~~~~~~ 84 (478)
|||++-..+.|++.-+..+.++|+++ +-+|++++.+...+.++.. +.++- ..++ .. +..
T Consensus 1 kILii~~~~iGD~i~~~p~l~~Lk~~~P~~~I~~l~~~~~~~l~~~~-----p~id~v~~~~----~~---------~~~ 62 (279)
T cd03789 1 RILVIRLSWIGDVVLATPLLRALKARYPDARITVLAPPWFAPLLELM-----PEVDRVIVLP----KK---------HGK 62 (279)
T ss_pred CEEEEecccHHHHHHHHHHHHHHHHHCCCCEEEEEEChhhHHHHhcC-----CccCEEEEcC----Cc---------ccc
Confidence 68999999999999999999999997 4899999999887766543 22321 2221 00 000
Q ss_pred hhHHHHHHHHHhhhhHHHHHHHhhcCCCEEEEcCCcccHHHHHHHhCCCeEE
Q 011765 85 YDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAAYWLPARARELGIPSGF 136 (478)
Q Consensus 85 ~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~~~~~~~A~~lgIP~i~ 136 (478)
.. + ... ..+...++..++|++|.-........++...+++...
T Consensus 63 ~~-~-------~~~-~~~~~~l~~~~~D~vi~~~~~~~~~~~~~~~~~~~~~ 105 (279)
T cd03789 63 LG-L-------GAR-RRLARALRRRRYDLAIDLQGSLRSALLPFLAGAPRRI 105 (279)
T ss_pred cc-h-------HHH-HHHHHHHhhcCCCEEEECCCccHHHHHHHHhCCCeEE
Confidence 00 0 011 1333345566999999776555445556666666543
|
Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria | Back alignment and domain information |
|---|
Probab=94.62 E-value=0.58 Score=40.22 Aligned_cols=94 Identities=11% Similarity=0.045 Sum_probs=54.2
Q ss_pred hCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCCCCCCCCccccCCCChhHHHHHHHHHhhhhHHHHHHHh-hcC
Q 011765 32 QKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVDNLRENAEATIDLPYDEVKYLKQSFDCLEEPMAKLLQ-SLA 110 (478)
Q Consensus 32 ~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~-~~~ 110 (478)
++||+|++++........ .| ++...+..+... ..........++.-..........+.+|.+ ...
T Consensus 1 q~gh~v~fl~~~~~~~~~--~G------V~~~~y~~~~~~------~~~~~~~~~~~e~~~~rg~av~~a~~~L~~~Gf~ 66 (171)
T PF12000_consen 1 QRGHEVVFLTERKRPPIP--PG------VRVVRYRPPRGP------TPGTHPYVRDFEAAVLRGQAVARAARQLRAQGFV 66 (171)
T ss_pred CCCCEEEEEecCCCCCCC--CC------cEEEEeCCCCCC------CCCCCcccccHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 579999999955554432 34 777777521110 000010111122222223334445555543 357
Q ss_pred CCEEEEcCCcccHHHHHHHh-CCCeEEEec
Q 011765 111 PDWLLFDFAAYWLPARAREL-GIPSGFFSI 139 (478)
Q Consensus 111 pD~vI~D~~~~~~~~~A~~l-gIP~i~~~~ 139 (478)
||+||...-...++.+-..+ +.|.+.+.-
T Consensus 67 PDvI~~H~GWGe~Lflkdv~P~a~li~Y~E 96 (171)
T PF12000_consen 67 PDVIIAHPGWGETLFLKDVFPDAPLIGYFE 96 (171)
T ss_pred CCEEEEcCCcchhhhHHHhCCCCcEEEEEE
Confidence 89999997766777888888 899998744
|
This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important. |
| >TIGR02919 accessory Sec system glycosyltransferase GtfB | Back alignment and domain information |
|---|
Probab=94.19 E-value=3.7 Score=41.30 Aligned_cols=140 Identities=6% Similarity=0.096 Sum_probs=84.5
Q ss_pred CceEEEEeCcccCCCHHHHHHHHHHHHh-CCCCEEEEEecCCCCCCCCCCCCChhhhhhcCCCcEEEe-ccCC-h-hhhh
Q 011765 277 GSVVYVAFGSEAKPSQEELTEIALGLEL-SKLPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYT-SWAP-Q-LAIL 352 (478)
Q Consensus 277 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~-~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~n~~~~-~~vp-q-~~vL 352 (478)
+.+++++ +...++.+....++ ++..|-+..... ..+.+.+-.+.+|++.. .+.+ + .+++
T Consensus 283 ~~~l~~t-------~s~~I~~i~~Lv~~lPd~~f~Iga~te----------~s~kL~~L~~y~nvvly~~~~~~~l~~ly 345 (438)
T TIGR02919 283 KQALILT-------NSDQIEHLEEIVQALPDYHFHIAALTE----------MSSKLMSLDKYDNVKLYPNITTQKIQELY 345 (438)
T ss_pred ccEEEEC-------CHHHHHHHHHHHHhCCCcEEEEEecCc----------ccHHHHHHHhcCCcEEECCcChHHHHHHH
Confidence 4477766 25555556655554 445555532211 11222221223566554 4566 3 6689
Q ss_pred cCCCceeeeeccC--hhhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeeccCCCCcccHHHHHHHHHHHhcccc
Q 011765 353 AHDSVGGFLTHAG--WSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLVEEK 430 (478)
Q Consensus 353 ~~~~~~~~ItHgG--~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~ 430 (478)
..|++-+-|+||. ..++.||+.+|+|++..-..... ...+.. |...+.. +.+++.++|.++|.
T Consensus 346 ~~~dlyLdin~~e~~~~al~eA~~~G~pI~afd~t~~~---~~~i~~---g~l~~~~------~~~~m~~~i~~lL~--- 410 (438)
T TIGR02919 346 QTCDIYLDINHGNEILNAVRRAFEYNLLILGFEETAHN---RDFIAS---ENIFEHN------EVDQLISKLKDLLN--- 410 (438)
T ss_pred HhccEEEEccccccHHHHHHHHHHcCCcEEEEecccCC---cccccC---CceecCC------CHHHHHHHHHHHhc---
Confidence 9999988899976 48999999999999996543221 122222 4444443 78999999999999
Q ss_pred hHHHHHHHHHHHHHhccc
Q 011765 431 GQIYRDKAKEMKGLFGDK 448 (478)
Q Consensus 431 ~~~~~~~a~~~~~~~~~~ 448 (478)
+++..+.+...++..++.
T Consensus 411 d~~~~~~~~~~q~~~a~~ 428 (438)
T TIGR02919 411 DPNQFRELLEQQREHAND 428 (438)
T ss_pred CHHHHHHHHHHHHHHhcc
Confidence 665444444444444443
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. |
| >PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Probab=93.92 E-value=0.61 Score=35.41 Aligned_cols=81 Identities=14% Similarity=0.143 Sum_probs=51.0
Q ss_pred ccChhhHHHHHHhCCcEeccccccchhhHHHHHhhcC-eEEEeeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHH
Q 011765 363 HAGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQ-IVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEM 441 (478)
Q Consensus 363 HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g-~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~ 441 (478)
+|-...+.|++++|+|+|+-+. ......+ ..| -++.. + +.+++.++|..+++ |+..++++.+-
T Consensus 9 ~~~~~r~~E~~a~G~~vi~~~~----~~~~~~~-~~~~~~~~~---~-----~~~el~~~i~~ll~---~~~~~~~ia~~ 72 (92)
T PF13524_consen 9 DGPNMRIFEAMACGTPVISDDS----PGLREIF-EDGEHIITY---N-----DPEELAEKIEYLLE---NPEERRRIAKN 72 (92)
T ss_pred CCCchHHHHHHHCCCeEEECCh----HHHHHHc-CCCCeEEEE---C-----CHHHHHHHHHHHHC---CHHHHHHHHHH
Confidence 4555789999999999999654 2222222 222 23332 2 78999999999999 66665555544
Q ss_pred H-HHhcccCChHHHHHHHH
Q 011765 442 K-GLFGDKGRHDRYVDNFL 459 (478)
Q Consensus 442 ~-~~~~~~~~~~~~~~~i~ 459 (478)
+ +.+.+.-.....++.|+
T Consensus 73 a~~~v~~~~t~~~~~~~il 91 (92)
T PF13524_consen 73 ARERVLKRHTWEHRAEQIL 91 (92)
T ss_pred HHHHHHHhCCHHHHHHHHH
Confidence 4 44444554455555554
|
|
| >COG1618 Predicted nucleotide kinase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.89 E-value=0.32 Score=40.87 Aligned_cols=56 Identities=20% Similarity=0.220 Sum_probs=48.1
Q ss_pred CccEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEec
Q 011765 5 SKLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKIS 66 (478)
Q Consensus 5 ~~~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~ 66 (478)
..|||++...|+.|-..-++.+++.|.++|+.|-=+-+++.++--...| ++.+++.
T Consensus 4 ~~mki~ITG~PGvGKtTl~~ki~e~L~~~g~kvgGf~t~EVR~gGkR~G------F~Ivdl~ 59 (179)
T COG1618 4 MAMKIFITGRPGVGKTTLVLKIAEKLREKGYKVGGFITPEVREGGKRIG------FKIVDLA 59 (179)
T ss_pred cceEEEEeCCCCccHHHHHHHHHHHHHhcCceeeeEEeeeeecCCeEee------eEEEEcc
Confidence 4799999999999999999999999999999999777777766666666 7777774
|
|
| >COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=93.53 E-value=5.3 Score=37.79 Aligned_cols=88 Identities=22% Similarity=0.349 Sum_probs=55.7
Q ss_pred CcEEEeccCCh---hhhhcCCCceeeeec---cChh-hHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeeccCCC
Q 011765 338 RGVVYTSWAPQ---LAILAHDSVGGFLTH---AGWS-SVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGD 410 (478)
Q Consensus 338 ~n~~~~~~vpq---~~vL~~~~~~~~ItH---gG~~-s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~~ 410 (478)
+++.+..++++ ..++..+++ ++.- .|.| ++.||+++|+|+|... .......+...+.|. +...
T Consensus 257 ~~v~~~g~~~~~~~~~~~~~~~~--~v~ps~~e~~~~~~~Ea~a~g~pvi~~~----~~~~~e~~~~~~~g~-~~~~--- 326 (381)
T COG0438 257 DNVKFLGYVPDEELAELLASADV--FVLPSLSEGFGLVLLEAMAAGTPVIASD----VGGIPEVVEDGETGL-LVPP--- 326 (381)
T ss_pred CcEEEecccCHHHHHHHHHhCCE--EEeccccccchHHHHHHHhcCCcEEECC----CCChHHHhcCCCceE-ecCC---
Confidence 56777788883 335666666 5544 3543 4699999999997744 443333444433566 4332
Q ss_pred CcccHHHHHHHHHHHhcccchHHHHHHHHH
Q 011765 411 GFFTRNSVAESLRLVLVEEKGQIYRDKAKE 440 (478)
Q Consensus 411 ~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~ 440 (478)
-+.+++..++..+++ +.+.++....
T Consensus 327 --~~~~~~~~~i~~~~~---~~~~~~~~~~ 351 (381)
T COG0438 327 --GDVEELADALEQLLE---DPELREELGE 351 (381)
T ss_pred --CCHHHHHHHHHHHhc---CHHHHHHHHH
Confidence 257999999999999 5544444443
|
|
| >TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 | Back alignment and domain information |
|---|
Probab=93.17 E-value=0.7 Score=47.61 Aligned_cols=87 Identities=10% Similarity=0.172 Sum_probs=57.9
Q ss_pred CcEEEeccCC--h-hhhhcCCCceeeeecc---ChhhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeeccCCCC
Q 011765 338 RGVVYTSWAP--Q-LAILAHDSVGGFLTHA---GWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDG 411 (478)
Q Consensus 338 ~n~~~~~~vp--q-~~vL~~~~~~~~ItHg---G~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~~~ 411 (478)
..+.+..+.+ + ..++..+.+ +|.=+ |.++..||+.+|+|+| .......|+...=|..+ .
T Consensus 409 ~~v~f~gy~~e~dl~~~~~~arl--~id~s~~eg~~~~ieAiS~GiPqI-------nyg~~~~V~d~~NG~li---~--- 473 (519)
T TIGR03713 409 ERIAFTTLTNEEDLISALDKLRL--IIDLSKEPDLYTQISGISAGIPQI-------NKVETDYVEHNKNGYII---D--- 473 (519)
T ss_pred cEEEEEecCCHHHHHHHHhhheE--EEECCCCCChHHHHHHHHcCCCee-------ecCCceeeEcCCCcEEe---C---
Confidence 3677777777 3 446666666 88544 7789999999999999 22233334444445555 2
Q ss_pred cccHHHHHHHHHHHhcccchHHHHHHHHHHHHH
Q 011765 412 FFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGL 444 (478)
Q Consensus 412 ~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~ 444 (478)
+..+|.++|..+|. +..-.+++..-+-.
T Consensus 474 --d~~~l~~al~~~L~---~~~~wn~~~~~sy~ 501 (519)
T TIGR03713 474 --DISELLKALDYYLD---NLKNWNYSLAYSIK 501 (519)
T ss_pred --CHHHHHHHHHHHHh---CHHHHHHHHHHHHH
Confidence 78999999999999 55444444443333
|
This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >COG0496 SurE Predicted acid phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.99 E-value=0.94 Score=41.29 Aligned_cols=112 Identities=20% Similarity=0.216 Sum_probs=63.9
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCCCCCCCCccccCCCChh
Q 011765 7 LQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVDNLRENAEATIDLPYD 86 (478)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~~~~~~~~ 86 (478)
||||+.-==+ =|---+..|+++|. .+++|+++.+...+.-+...- .+...+....+. .........+
T Consensus 1 mrILlTNDDG-i~a~Gi~aL~~al~-~~~dV~VVAP~~~qSg~s~sl-Tl~~Plr~~~~~--------~~~~av~GTP-- 67 (252)
T COG0496 1 MRILLTNDDG-IHAPGIRALARALR-EGADVTVVAPDREQSGASHSL-TLHEPLRVRQVD--------NGAYAVNGTP-- 67 (252)
T ss_pred CeEEEecCCc-cCCHHHHHHHHHHh-hCCCEEEEccCCCCccccccc-ccccCceeeEec--------cceEEecCCh--
Confidence 5666543222 13333677888888 999999999998766443211 111122222221 1111011111
Q ss_pred HHHHHHHHHhhhhHHHHHHHhhcCCCEEEEcC----------Ccc---cHHHHHHHhCCCeEEEec
Q 011765 87 EVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDF----------AAY---WLPARARELGIPSGFFSI 139 (478)
Q Consensus 87 ~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~----------~~~---~~~~~A~~lgIP~i~~~~ 139 (478)
.+...-.+..++++.+||+||+.. ..+ .|++=|..+|||.|.++.
T Consensus 68 --------aDCV~lal~~l~~~~~pDLVvSGIN~G~Nlg~dv~ySGTVaaA~Ea~~~GipsIA~S~ 125 (252)
T COG0496 68 --------ADCVILGLNELLKEPRPDLVVSGINAGANLGDDVIYSGTVAAAMEAALLGIPAIAISL 125 (252)
T ss_pred --------HHHHHHHHHHhccCCCCCEEEeCccCCCccccceeeeehHHHHHHHHHcCccceeeee
Confidence 133444677788788899999763 222 345557889999999865
|
|
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=92.77 E-value=1.1 Score=41.52 Aligned_cols=91 Identities=19% Similarity=0.174 Sum_probs=56.6
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCccc-cCCCCCCCCCCCeEEEEecCCCCCCCCCCccccCCCCh
Q 011765 7 LQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNID-RLPRLPQNLASMIQFVKISLPHVDNLRENAEATIDLPY 85 (478)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~-~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~~~~~~~ 85 (478)
|||+++..-+. -..|++.|.++||+|+..+...... .....+ ...++ . +. +
T Consensus 1 m~ILvlGGT~e-----gr~la~~L~~~g~~v~~s~~t~~~~~~~~~~g-----~~~v~-~-----g~----------l-- 52 (256)
T TIGR00715 1 MTVLLMGGTVD-----SRAIAKGLIAQGIEILVTVTTSEGKHLYPIHQ-----ALTVH-T-----GA----------L-- 52 (256)
T ss_pred CeEEEEechHH-----HHHHHHHHHhCCCeEEEEEccCCccccccccC-----CceEE-E-----CC----------C--
Confidence 57776643332 6789999999999999888776543 222221 01111 1 00 0
Q ss_pred hHHHHHHHHHhhhhHHHHHHHhhcCCCEEEEcCCcc------cHHHHHHHhCCCeEEE
Q 011765 86 DEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAAY------WLPARARELGIPSGFF 137 (478)
Q Consensus 86 ~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~~------~~~~~A~~lgIP~i~~ 137 (478)
-...+.+++++.++|+||--..-+ -+..+++.+|||++.+
T Consensus 53 ------------~~~~l~~~l~~~~i~~VIDAtHPfA~~is~~a~~a~~~~~ipylR~ 98 (256)
T TIGR00715 53 ------------DPQELREFLKRHSIDILVDATHPFAAQITTNATAVCKELGIPYVRF 98 (256)
T ss_pred ------------CHHHHHHHHHhcCCCEEEEcCCHHHHHHHHHHHHHHHHhCCcEEEE
Confidence 012466777888999887553322 2356789999999988
|
This enzyme was found to be a monomer by gel filtration. |
| >PF00731 AIRC: AIR carboxylase; InterPro: IPR000031 Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE | Back alignment and domain information |
|---|
Probab=92.34 E-value=2 Score=35.96 Aligned_cols=138 Identities=16% Similarity=0.152 Sum_probs=71.2
Q ss_pred eEEEEeCcccCCCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCCCCChhhhhhcCCCcEEEeccCChhhhhcCCCce
Q 011765 279 VVYVAFGSEAKPSQEELTEIALGLELSKLPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVG 358 (478)
Q Consensus 279 ~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~n~~~~~~vpq~~vL~~~~~~ 358 (478)
.|.|-+||.+ +....+++...|++.+..+-..+. ..-..|+.+. +|+...+- ..+++
T Consensus 2 ~V~Ii~gs~S--D~~~~~~a~~~L~~~gi~~~~~V~--------saHR~p~~l~-----------~~~~~~~~-~~~~v- 58 (150)
T PF00731_consen 2 KVAIIMGSTS--DLPIAEEAAKTLEEFGIPYEVRVA--------SAHRTPERLL-----------EFVKEYEA-RGADV- 58 (150)
T ss_dssp EEEEEESSGG--GHHHHHHHHHHHHHTT-EEEEEE----------TTTSHHHHH-----------HHHHHTTT-TTESE-
T ss_pred eEEEEeCCHH--HHHHHHHHHHHHHHcCCCEEEEEE--------eccCCHHHHH-----------HHHHHhcc-CCCEE-
Confidence 4566677766 788888999999998876544332 1223444222 22222111 22344
Q ss_pred eeeeccChhh----HHHHHHhCCcEeccccccchh---hHHHHHhhc--CeEEEeeccCCCCcccHHHHHHHHHHHhccc
Q 011765 359 GFLTHAGWSS----VVEALQFGMPLIVLTCYADQG---LNAKLLEEK--QIVELIPRDEGDGFFTRNSVAESLRLVLVEE 429 (478)
Q Consensus 359 ~~ItHgG~~s----~~eal~~GvP~l~~P~~~DQ~---~na~~v~~~--g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~ 429 (478)
||+=+|... +.-++. -.|+|.+|....+. +--.-+.++ |+++..-.-+ +-.++..++..|-.+ .
T Consensus 59 -iIa~AG~~a~Lpgvva~~t-~~PVIgvP~~~~~~~g~d~l~S~vqMp~g~pvatv~i~--~~~nAA~~A~~ILa~-~-- 131 (150)
T PF00731_consen 59 -IIAVAGMSAALPGVVASLT-TLPVIGVPVSSGYLGGLDSLLSIVQMPSGVPVATVGIN--NGFNAALLAARILAL-K-- 131 (150)
T ss_dssp -EEEEEESS--HHHHHHHHS-SS-EEEEEE-STTTTTHHHHHHHHT--TTS--EE-SST--HHHHHHHHHHHHHHT-T--
T ss_pred -EEEECCCcccchhhheecc-CCCEEEeecCcccccCcccHHHHHhccCCCCceEEEcc--CchHHHHHHHHHHhc-C--
Confidence 888777643 333333 67999999876543 222223333 7766553311 003444444444222 3
Q ss_pred chHHHHHHHHHHHHHhcc
Q 011765 430 KGQIYRDKAKEMKGLFGD 447 (478)
Q Consensus 430 ~~~~~~~~a~~~~~~~~~ 447 (478)
|++++++.+..++..++
T Consensus 132 -d~~l~~kl~~~~~~~~~ 148 (150)
T PF00731_consen 132 -DPELREKLRAYREKMKE 148 (150)
T ss_dssp --HHHHHHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHHHHc
Confidence 68899999988887653
|
PurK, N5-carboxyaminoimidazole ribonucleotide (N5_CAIR) synthetase, catalyzes the conversion of 5-aminoimidazole ribonucleotide (AIR), ATP, and bicarbonate to N5-CAIR, ADP, and Pi. PurE converts N5-CAIR to CAIR, the sixth step of de novo purine biosynthesis. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. Some members of this family contain two copies of this domain []. The crystal structure of PurE indicates a unique quaternary structure that confirms the octameric nature of the enzyme [].; GO: 0004638 phosphoribosylaminoimidazole carboxylase activity, 0006189 'de novo' IMP biosynthetic process; PDB: 3TRH_O 2YWX_A 2NSL_A 1D7A_A 2NSJ_A 1QCZ_A 2ATE_A 2NSH_A 3RG8_C 3RGG_D .... |
| >COG4370 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=91.74 E-value=1.5 Score=40.74 Aligned_cols=105 Identities=14% Similarity=0.024 Sum_probs=64.7
Q ss_pred cCChhhhhcCCCceeeeeccChhhHHHHHHhCCcEeccccccchhh--HHHHHhhc-CeEEEeeccCCCCcccHHHHHHH
Q 011765 345 WAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQGL--NAKLLEEK-QIVELIPRDEGDGFFTRNSVAES 421 (478)
Q Consensus 345 ~vpq~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~--na~~v~~~-g~G~~l~~~~~~~~~~~~~l~~~ 421 (478)
|-...++|.++++ .|--+|- .+-+++-.|+|+|.+|-.+-|+. -|.+=.++ |+.+.+-.. .+..-...
T Consensus 302 qqsfadiLH~ada--algmAGT-AtEQavGLGkPvi~fPg~GPQy~pgFA~rQ~rLLG~sltlv~~------~aq~a~~~ 372 (412)
T COG4370 302 QQSFADILHAADA--ALGMAGT-ATEQAVGLGKPVIGFPGQGPQYNPGFAERQQRLLGASLTLVRP------EAQAAAQA 372 (412)
T ss_pred HHHHHHHHHHHHH--HHHhccc-hHHHhhccCCceeecCCCCCCcChHHHHHHHHHhcceeeecCC------chhhHHHH
Confidence 3344667766666 4433322 23456889999999999998854 45554444 888877653 34444445
Q ss_pred HHHHhcccchHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHh
Q 011765 422 LRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLKN 464 (478)
Q Consensus 422 i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~ 464 (478)
.+++|. |+++...+++-.++--.++| ++..|.+.+++
T Consensus 373 ~q~ll~---dp~r~~air~nGqrRiGqaG---aa~rIAe~l~e 409 (412)
T COG4370 373 VQELLG---DPQRLTAIRHNGQRRIGQAG---AARRIAEELGE 409 (412)
T ss_pred HHHHhc---ChHHHHHHHhcchhhccCcc---hHHHHHHHHHH
Confidence 556999 89999888865554333333 44445444443
|
|
| >TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=91.24 E-value=2.3 Score=43.19 Aligned_cols=103 Identities=17% Similarity=0.145 Sum_probs=68.7
Q ss_pred eccCChhh---hhcCCCceeeee---ccCh-hhHHHHHHhCCc----EeccccccchhhHHHHHhhcCeEEEeeccCCCC
Q 011765 343 TSWAPQLA---ILAHDSVGGFLT---HAGW-SSVVEALQFGMP----LIVLTCYADQGLNAKLLEEKQIVELIPRDEGDG 411 (478)
Q Consensus 343 ~~~vpq~~---vL~~~~~~~~It---HgG~-~s~~eal~~GvP----~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~~~ 411 (478)
...+++.+ +++.+++ ||. +=|+ .++.||+++|+| +|+--+.+- +..+ +-|..++..
T Consensus 341 ~~~~~~~el~aly~aaDv--~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~----~~~l---~~gllVnP~---- 407 (456)
T TIGR02400 341 NRSYDREELMALYRAADV--GLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGA----AQEL---NGALLVNPY---- 407 (456)
T ss_pred cCCCCHHHHHHHHHhCcE--EEECccccccCccHHHHHHhcCCCCceEEEeCCCCC----hHHh---CCcEEECCC----
Confidence 34566655 4566777 664 4465 588999999999 776555432 2222 236666654
Q ss_pred cccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhcccCChHHHHHHHHHHH
Q 011765 412 FFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYL 462 (478)
Q Consensus 412 ~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~ 462 (478)
+.+.++++|.++|+.. .++.+++.+++.+.+.. .....-++.+++.+
T Consensus 408 --d~~~lA~aI~~aL~~~-~~er~~r~~~~~~~v~~-~~~~~W~~~~l~~l 454 (456)
T TIGR02400 408 --DIDGMADAIARALTMP-LEEREERHRAMMDKLRK-NDVQRWREDFLSDL 454 (456)
T ss_pred --CHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHhh-CCHHHHHHHHHHHh
Confidence 7899999999999832 35677777778887654 45556666666655
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib |
| >PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [] | Back alignment and domain information |
|---|
Probab=91.19 E-value=1.1 Score=38.75 Aligned_cols=115 Identities=12% Similarity=0.152 Sum_probs=60.3
Q ss_pred ecCCCccCHHHHHHHHHHH-HhC-CCeEEEEeCCCccccC--CCCCCCCCCCeEEEEecCCCCCCCCCCccccCCCChhH
Q 011765 12 FPWLAFGHMIPWLELAKLI-AQK-GHKIFFISTPRNIDRL--PRLPQNLASMIQFVKISLPHVDNLRENAEATIDLPYDE 87 (478)
Q Consensus 12 ~~~~~~gH~~p~l~La~~L-~~r-Gh~Vt~~~~~~~~~~~--~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~~~~~~~~~ 87 (478)
+-.++-||+.-|+.|.+.+ .++ .++..+++........ .+.........++..+| . . . ......
T Consensus 3 ~v~gsGGHt~eml~L~~~~~~~~~~~~~~ivt~~d~~S~~k~~~~~~~~~~~~~~~~~~----r----~-r---~v~q~~ 70 (170)
T PF08660_consen 3 VVLGSGGHTAEMLRLLKALDNDRYQPRTYIVTEGDKQSRSKAEQLEKSSSKRHKILEIP----R----A-R---EVGQSY 70 (170)
T ss_pred EEEcCcHHHHHHHHHHHHhhhhcCCCcEEEEEcCCcccHHHHHHHHHhccccceeeccc----e----E-E---Eechhh
Confidence 3456779999999999999 333 4666666655543321 11110000111233332 1 0 0 111111
Q ss_pred HHHHHHHHhhhhHHHHHHHhhcCCCEEEEcCCcc--cHHHHHHHh------CCCeEEEec
Q 011765 88 VKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAAY--WLPARAREL------GIPSGFFSI 139 (478)
Q Consensus 88 ~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~~--~~~~~A~~l------gIP~i~~~~ 139 (478)
..........+. ....++.+.+||+||+..-.. +.+.+|..+ |.+.|.+=+
T Consensus 71 ~~~~~~~l~~~~-~~~~il~r~rPdvii~nGpg~~vp~~~~~~l~~~~~~~~~kiIyIES 129 (170)
T PF08660_consen 71 LTSIFTTLRAFL-QSLRILRRERPDVIISNGPGTCVPVCLAAKLLRLLGLRGSKIIYIES 129 (170)
T ss_pred HhhHHHHHHHHH-HHHHHHHHhCCCEEEEcCCceeeHHHHHHHHHHHhhccCCcEEEEEe
Confidence 112222222222 223344677899999996444 456788888 999998733
|
|
| >PRK13933 stationary phase survival protein SurE; Provisional | Back alignment and domain information |
|---|
Probab=90.55 E-value=6 Score=36.43 Aligned_cols=116 Identities=15% Similarity=0.161 Sum_probs=58.6
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCCCCCCCCccccCCCChh
Q 011765 7 LQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVDNLRENAEATIDLPYD 86 (478)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~~~~~~~~ 86 (478)
||||+.-==+. |---+..|+++|++ +|+|+++.+...+.-... .-.....+....+.. ++...........+
T Consensus 1 M~ILvtNDDGi-~apGl~aL~~~l~~-~~~V~VvAP~~~~Sg~g~-sit~~~pl~~~~~~~---~~~~~~~~~v~GTP-- 72 (253)
T PRK13933 1 MNILLTNDDGI-NAEGINTLAELLSK-YHEVIIVAPENQRSASSH-SITIYEPIIIKEVKL---EGINSKAYSISGTP-- 72 (253)
T ss_pred CeEEEEcCCCC-CChhHHHHHHHHHh-CCcEEEEccCCCCccccc-cccCCCCeEEEeecc---CCCCccEEEECCcH--
Confidence 67777632222 11227888999975 689999988877653222 111112233333311 00000000001111
Q ss_pred HHHHHHHHHhhhhHHHHHHHhhcCCCEEEEcC----------Ccc---cHHHHHHHhCCCeEEEec
Q 011765 87 EVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDF----------AAY---WLPARARELGIPSGFFSI 139 (478)
Q Consensus 87 ~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~----------~~~---~~~~~A~~lgIP~i~~~~ 139 (478)
.+...-.+..++ ..+||+||+.. +.+ .|++-|..+|||.|.++.
T Consensus 73 --------aDcV~lal~~l~-~~~pDLVvSGIN~G~N~g~dv~ySGTVgAA~ea~~~GiPsiA~S~ 129 (253)
T PRK13933 73 --------ADCVRVALDKLV-PDNIDMVISGINKGLNIGNDILYSGTVSAAIEGAIYKVPSIAVSA 129 (253)
T ss_pred --------HHHHHHHHHHhc-CCCCCEEEECCcCCCCCCcCCccchhHHHHHHHHHcCCCeEEEEe
Confidence 111222334444 35799999763 222 345667888999999865
|
|
| >PRK13932 stationary phase survival protein SurE; Provisional | Back alignment and domain information |
|---|
Probab=90.40 E-value=9.2 Score=35.30 Aligned_cols=118 Identities=15% Similarity=0.179 Sum_probs=63.4
Q ss_pred CCccEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCCCCCCCCccccCCC
Q 011765 4 NSKLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVDNLRENAEATIDL 83 (478)
Q Consensus 4 ~~~~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~~~~~ 83 (478)
..+||||+.-==+.- ---+..|+++|.+.| +|+++.+...+.-....- .....+++..+... .... . ......
T Consensus 3 ~~~M~ILltNDDGi~-a~Gi~aL~~~l~~~g-~V~VvAP~~~~Sg~g~ai-t~~~pl~~~~~~~~--~~~~-~-y~v~GT 75 (257)
T PRK13932 3 DKKPHILVCNDDGIE-GEGIHVLAASMKKIG-RVTVVAPAEPHSGMSHAM-TLGVPLRIKEYQKN--NRFF-G-YTVSGT 75 (257)
T ss_pred CCCCEEEEECCCCCC-CHHHHHHHHHHHhCC-CEEEEcCCCCCCCCcccc-cCCCCeEEEEEccC--CCce-E-EEEcCc
Confidence 457999987543331 134778899998888 799888887655332211 12233444443210 0000 0 000111
Q ss_pred ChhHHHHHHHHHhhhhHHHHHHHhhcCCCEEEEcC----------Cc---ccHHHHHHHhCCCeEEEec
Q 011765 84 PYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDF----------AA---YWLPARARELGIPSGFFSI 139 (478)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~----------~~---~~~~~~A~~lgIP~i~~~~ 139 (478)
+ .+...-.+..++ ..+||+||+.. +. ..|.+-|..+|||.|.++.
T Consensus 76 P----------aDCV~lal~~~~-~~~pDLVvSGIN~G~N~G~dv~ySGTVgAA~Ea~~~GiPsIA~S~ 133 (257)
T PRK13932 76 P----------VDCIKVALSHIL-PEKPDLIVSGINYGSNTATNTLYSGTVAAALEGAIQGIPSLAFSL 133 (257)
T ss_pred H----------HHHHHHHHHhhc-CCCCCEEEECCcCCCCCCcCEecchhHHHHHHHHHcCCCeEEEEc
Confidence 1 111222344444 35799999764 11 1345667888999999865
|
|
| >PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [] | Back alignment and domain information |
|---|
Probab=88.40 E-value=0.24 Score=42.79 Aligned_cols=44 Identities=16% Similarity=0.165 Sum_probs=29.9
Q ss_pred hhhhHHHHHHHhhcCCCEEEEcCCcccHH-H--H--HHHh-CCCeEEEec
Q 011765 96 DCLEEPMAKLLQSLAPDWLLFDFAAYWLP-A--R--AREL-GIPSGFFSI 139 (478)
Q Consensus 96 ~~~~~~l~~ll~~~~pD~vI~D~~~~~~~-~--~--A~~l-gIP~i~~~~ 139 (478)
....+.+.+++++.+||+||+.......+ + + ...+ ++|++.+.+
T Consensus 75 ~~~~~~l~~~l~~~~PD~IIsThp~~~~~~l~~lk~~~~~~~~p~~tvvT 124 (169)
T PF06925_consen 75 RLFARRLIRLLREFQPDLIISTHPFPAQVPLSRLKRRGRLPNIPVVTVVT 124 (169)
T ss_pred HHHHHHHHHHHhhcCCCEEEECCcchhhhHHHHHHHhhcccCCcEEEEEc
Confidence 33566889999999999999997654333 1 1 2223 578877655
|
; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process |
| >PF02951 GSH-S_N: Prokaryotic glutathione synthetase, N-terminal domain; InterPro: IPR004215 Prokaryotic glutathione synthetase 6 | Back alignment and domain information |
|---|
Probab=88.28 E-value=0.78 Score=36.78 Aligned_cols=41 Identities=15% Similarity=0.075 Sum_probs=29.8
Q ss_pred cEEEEecCCCcc---CHHHHHHHHHHHHhCCCeEEEEeCCCccc
Q 011765 7 LQIAMFPWLAFG---HMIPWLELAKLIAQKGHKIFFISTPRNID 47 (478)
Q Consensus 7 ~~il~~~~~~~g---H~~p~l~La~~L~~rGh~Vt~~~~~~~~~ 47 (478)
|||+|+.-|-.+ .-.-++.|+.+-++|||+|.++......-
T Consensus 1 Mki~fvmDpi~~i~~~kDTT~alm~eAq~RGhev~~~~~~dL~~ 44 (119)
T PF02951_consen 1 MKIAFVMDPIESIKPYKDTTFALMLEAQRRGHEVFYYEPGDLSL 44 (119)
T ss_dssp -EEEEEES-GGG--TTT-HHHHHHHHHHHTT-EEEEE-GGGEEE
T ss_pred CeEEEEeCCHHHCCCCCChHHHHHHHHHHCCCEEEEEEcCcEEE
Confidence 789888777554 45678999999999999999999887653
|
3.2.3 from EC (glutathione synthase) catalyses the conversion of gamma-L-glutamyl-L-cysteine and glycine to orthophosphate and glutathione in the presence of ATP. This is the second step in glutathione biosynthesis. The enzyme is inhibited by 7,8-dihydrofolate, methotrexate and trimethoprim. This domain is the N terminus of the enzyme.; GO: 0004363 glutathione synthase activity, 0006750 glutathione biosynthetic process; PDB: 1GLV_A 1GSA_A 1GSH_A 2GLT_A. |
| >PRK08057 cobalt-precorrin-6x reductase; Reviewed | Back alignment and domain information |
|---|
Probab=86.51 E-value=4.3 Score=37.37 Aligned_cols=92 Identities=21% Similarity=0.136 Sum_probs=58.3
Q ss_pred ccEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCCCCCCCCccccCCCCh
Q 011765 6 KLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVDNLRENAEATIDLPY 85 (478)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~~~~~~~ 85 (478)
+++|+++..-+.| ..||+.|.++|+.|++.+...+.. ....+ .....- .+.
T Consensus 2 ~~~IlvlgGT~eg-----r~la~~L~~~g~~v~~Svat~~g~-~~~~~------~~v~~G----------------~l~- 52 (248)
T PRK08057 2 MPRILLLGGTSEA-----RALARALAAAGVDIVLSLAGRTGG-PADLP------GPVRVG----------------GFG- 52 (248)
T ss_pred CceEEEEechHHH-----HHHHHHHHhCCCeEEEEEccCCCC-cccCC------ceEEEC----------------CCC-
Confidence 4678887666555 478999999999998877666544 11111 221110 110
Q ss_pred hHHHHHHHHHhhhhHHHHHHHhhcCCCEEEEcCCccc-------HHHHHHHhCCCeEEEec
Q 011765 86 DEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAAYW-------LPARARELGIPSGFFSI 139 (478)
Q Consensus 86 ~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~~~-------~~~~A~~lgIP~i~~~~ 139 (478)
-.+.|.+++++.++++||-= ..++ +..+|+.+|||++.+.-
T Consensus 53 ------------~~~~l~~~l~~~~i~~VIDA-THPfA~~is~~a~~ac~~~~ipyiR~eR 100 (248)
T PRK08057 53 ------------GAEGLAAYLREEGIDLVIDA-THPYAAQISANAAAACRALGIPYLRLER 100 (248)
T ss_pred ------------CHHHHHHHHHHCCCCEEEEC-CCccHHHHHHHHHHHHHHhCCcEEEEeC
Confidence 12366777788899997733 2232 34678999999999843
|
|
| >PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long) | Back alignment and domain information |
|---|
Probab=85.59 E-value=27 Score=33.57 Aligned_cols=82 Identities=24% Similarity=0.289 Sum_probs=65.0
Q ss_pred CcEE-EeccCCh---hhhhcCCCceeeeec--cChhhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeeccCCCC
Q 011765 338 RGVV-YTSWAPQ---LAILAHDSVGGFLTH--AGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDG 411 (478)
Q Consensus 338 ~n~~-~~~~vpq---~~vL~~~~~~~~ItH--gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~~~ 411 (478)
+++. +.+++|. .++|+.|+++.|.+. =|+|+++-.|+.|+|++. ..+-.--+-+++.|+-+....++
T Consensus 245 ~~~~iL~e~mpf~eYl~lL~~cDl~if~~~RQQgiGnI~lLl~~G~~v~L----~~~np~~~~l~~~~ipVlf~~d~--- 317 (360)
T PF07429_consen 245 ENFQILTEFMPFDEYLALLSRCDLGIFNHNRQQGIGNICLLLQLGKKVFL----SRDNPFWQDLKEQGIPVLFYGDE--- 317 (360)
T ss_pred cceeEhhhhCCHHHHHHHHHhCCEEEEeechhhhHhHHHHHHHcCCeEEE----ecCChHHHHHHhCCCeEEecccc---
Confidence 4664 4568876 558899999777764 589999999999999988 55555666778889888877776
Q ss_pred cccHHHHHHHHHHHhc
Q 011765 412 FFTRNSVAESLRLVLV 427 (478)
Q Consensus 412 ~~~~~~l~~~i~~ll~ 427 (478)
++...++++=+++..
T Consensus 318 -L~~~~v~ea~rql~~ 332 (360)
T PF07429_consen 318 -LDEALVREAQRQLAN 332 (360)
T ss_pred -CCHHHHHHHHHHHhh
Confidence 999999988887776
|
This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall |
| >PRK06849 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=85.09 E-value=3.1 Score=41.34 Aligned_cols=37 Identities=24% Similarity=0.309 Sum_probs=29.5
Q ss_pred CccEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCc
Q 011765 5 SKLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRN 45 (478)
Q Consensus 5 ~~~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~ 45 (478)
++|+||+..... .-.+.+|+.|.+.||+|+++.....
T Consensus 3 ~~~~VLI~G~~~----~~~l~iar~l~~~G~~Vi~~d~~~~ 39 (389)
T PRK06849 3 TKKTVLITGARA----PAALELARLFHNAGHTVILADSLKY 39 (389)
T ss_pred CCCEEEEeCCCc----HHHHHHHHHHHHCCCEEEEEeCCch
Confidence 578999985333 3589999999999999999877643
|
|
| >PRK00346 surE 5'(3')-nucleotidase/polyphosphatase; Provisional | Back alignment and domain information |
|---|
Probab=84.93 E-value=21 Score=32.92 Aligned_cols=111 Identities=18% Similarity=0.196 Sum_probs=60.1
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCCCCCCCCccccCCCChh
Q 011765 7 LQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVDNLRENAEATIDLPYD 86 (478)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~~~~~~~~ 86 (478)
||||+.-==+. |---+..|+++|.+. |+|+++.+...+.-+...- .....+++..+. +. .......+
T Consensus 1 M~ILlTNDDGi-~a~Gi~aL~~~l~~~-~~V~VvAP~~~qSg~g~ai-t~~~pl~~~~~~----~~----~~~v~GTP-- 67 (250)
T PRK00346 1 MRILLTNDDGI-HAPGIRALAEALREL-ADVTVVAPDRERSGASHSL-TLTRPLRVEKVD----NG----FYAVDGTP-- 67 (250)
T ss_pred CeEEEECCCCC-CChhHHHHHHHHHhC-CCEEEEeCCCCCcCCcccc-cCCCCeEEEEec----CC----eEEECCcH--
Confidence 56666533222 223378899999988 7999999888765443221 111224444331 11 00001111
Q ss_pred HHHHHHHHHhhhhHHHHHHHhhcCCCEEEEcC----------Ccc---cHHHHHHHhCCCeEEEec
Q 011765 87 EVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDF----------AAY---WLPARARELGIPSGFFSI 139 (478)
Q Consensus 87 ~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~----------~~~---~~~~~A~~lgIP~i~~~~ 139 (478)
.+...-.+..++. .+||+||+.. +.+ .|+.-|..+|||.|.++.
T Consensus 68 --------aDcV~~gl~~l~~-~~pDlVvSGIN~G~N~g~~v~ySGTVgAA~ea~~~GiPaiA~S~ 124 (250)
T PRK00346 68 --------TDCVHLALNGLLD-PKPDLVVSGINHGANLGDDVLYSGTVAAAMEGALLGIPAIAVSL 124 (250)
T ss_pred --------HHHHHHHHHhhcc-CCCCEEEeCCccCCCCCCCeeccHHHHHHHHHHhcCCCeEEEec
Confidence 1122223444443 4899999764 222 345567788999999865
|
|
| >COG1703 ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=84.50 E-value=22 Score=33.51 Aligned_cols=113 Identities=11% Similarity=0.026 Sum_probs=71.3
Q ss_pred CCccEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCC--CCC-------CCCCCeEEEEecCCCCCCCC
Q 011765 4 NSKLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPR--LPQ-------NLASMIQFVKISLPHVDNLR 74 (478)
Q Consensus 4 ~~~~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~--~g~-------~~~~~i~~~~i~~~~~~~l~ 74 (478)
++...|.+...|+-|-=.-.-.|++.|.++||+|-++.-++...+--. .|+ +..+++-+.++| ..
T Consensus 49 G~a~viGITG~PGaGKSTli~~L~~~l~~~G~rVaVlAVDPSSp~TGGsiLGDRiRM~~~~~~~~vFiRs~~----sr-- 122 (323)
T COG1703 49 GNAHVIGITGVPGAGKSTLIEALGRELRERGHRVAVLAVDPSSPFTGGSILGDRIRMQRLAVDPGVFIRSSP----SR-- 122 (323)
T ss_pred CCCcEEEecCCCCCchHHHHHHHHHHHHHCCcEEEEEEECCCCCCCCccccccHhhHHhhccCCCeEEeecC----CC--
Confidence 345688999999999999999999999999999999887766443211 111 123445555554 10
Q ss_pred CCccccCCCChhHHHHHHHHHhhhhHHHHHHHhhcCCCEEEEcCCccc--HHHHHHHhCCCeEEE
Q 011765 75 ENAEATIDLPYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAAYW--LPARARELGIPSGFF 137 (478)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~~~--~~~~A~~lgIP~i~~ 137 (478)
+. +..+ ..-......+++..++|+||.+..... =..++...++=.++.
T Consensus 123 -G~----------lGGl----S~at~~~i~~ldAaG~DvIIVETVGvGQsev~I~~~aDt~~~v~ 172 (323)
T COG1703 123 -GT----------LGGL----SRATREAIKLLDAAGYDVIIVETVGVGQSEVDIANMADTFLVVM 172 (323)
T ss_pred -cc----------chhh----hHHHHHHHHHHHhcCCCEEEEEecCCCcchhHHhhhcceEEEEe
Confidence 00 0011 122234556677889999999976553 345666666555544
|
|
| >PRK13935 stationary phase survival protein SurE; Provisional | Back alignment and domain information |
|---|
Probab=84.50 E-value=24 Score=32.50 Aligned_cols=115 Identities=15% Similarity=0.156 Sum_probs=58.5
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCCCCCCCCccccCCCChh
Q 011765 7 LQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVDNLRENAEATIDLPYD 86 (478)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~~~~~~~~ 86 (478)
||||+..==+. |---+..|+++|++ +|+|+++.+...+.-+...- .....+.+..+... ++. ........+
T Consensus 1 M~ILlTNDDGi-~a~Gi~aL~~~l~~-~~~V~VvAP~~~qSg~g~ai-t~~~pl~~~~~~~~--~~~--~~y~v~GTP-- 71 (253)
T PRK13935 1 MNILVTNDDGI-TSPGIIILAEYLSE-KHEVFVVAPDKERSATGHAI-TIRVPLWAKKVFIS--ERF--VAYATTGTP-- 71 (253)
T ss_pred CeEEEECCCCC-CCHHHHHHHHHHHh-CCcEEEEccCCCCccccccc-cCCCCceEEEeecC--CCc--cEEEECCcH--
Confidence 57777643333 22337788899965 68999999887765333211 11122333333200 000 000011111
Q ss_pred HHHHHHHHHhhhhHHHHHHHhhcCCCEEEEcC----------Ccc---cHHHHHHHhCCCeEEEec
Q 011765 87 EVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDF----------AAY---WLPARARELGIPSGFFSI 139 (478)
Q Consensus 87 ~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~----------~~~---~~~~~A~~lgIP~i~~~~ 139 (478)
.+...-.+..++ ..+||+||+.. +.+ .|.+-|..+|||.|.++.
T Consensus 72 --------aDcV~lal~~~~-~~~pDLVvSGIN~G~N~g~~v~ySGTVgAA~ea~~~GiPaiA~S~ 128 (253)
T PRK13935 72 --------ADCVKLGYDVIM-DKKVDLVISGINRGPNLGTDVLYSGTVSGALEGAMMGVPSIAISS 128 (253)
T ss_pred --------HHHHHHHHHhhc-cCCCCEEEeCCccCCCCCcCCcccHhHHHHHHHHhcCCCeEEEEc
Confidence 111222333333 34799999763 222 344567788999999965
|
|
| >COG0003 ArsA Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
Probab=84.03 E-value=5.1 Score=38.39 Aligned_cols=44 Identities=20% Similarity=0.167 Sum_probs=34.7
Q ss_pred ccEEEEecC-CCccCHHHHHHHHHHHHhCCCeEEEEeCCCccccC
Q 011765 6 KLQIAMFPW-LAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRL 49 (478)
Q Consensus 6 ~~~il~~~~-~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~ 49 (478)
++||+|++. ++.|-..-..++|-.|++.|.+|.++++++....-
T Consensus 1 ~~riv~f~GKGGVGKTT~aaA~A~~lA~~g~kvLlvStDPAhsL~ 45 (322)
T COG0003 1 MTRIVFFTGKGGVGKTTIAAATAVKLAESGKKVLLVSTDPAHSLG 45 (322)
T ss_pred CcEEEEEecCCcccHHHHHHHHHHHHHHcCCcEEEEEeCCCCchH
Confidence 357776654 56699999999999999999998888888765543
|
|
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=83.23 E-value=16 Score=40.04 Aligned_cols=105 Identities=13% Similarity=0.121 Sum_probs=67.0
Q ss_pred cCChh---hhhcCCCceeeee---ccChh-hHHHHHHhCCc---Eeccc-cccchhhHHHHHhhcC-eEEEeeccCCCCc
Q 011765 345 WAPQL---AILAHDSVGGFLT---HAGWS-SVVEALQFGMP---LIVLT-CYADQGLNAKLLEEKQ-IVELIPRDEGDGF 412 (478)
Q Consensus 345 ~vpq~---~vL~~~~~~~~It---HgG~~-s~~eal~~GvP---~l~~P-~~~DQ~~na~~v~~~g-~G~~l~~~~~~~~ 412 (478)
+++.. ++++.+++ ||. .-|+| +..|++++|+| +++++ +.+ .+.. +| -|+.++..
T Consensus 363 ~v~~~el~aly~~ADv--fvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~G----~~~~---l~~~allVnP~----- 428 (797)
T PLN03063 363 SVDFNYLCALYAITDV--MLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFAG----AGQS---LGAGALLVNPW----- 428 (797)
T ss_pred CCCHHHHHHHHHhCCE--EEeCccccccCcchhhHheeecCCCCCEEeeCCcC----chhh---hcCCeEEECCC-----
Confidence 45553 45667777 663 45875 78899999999 44444 332 1111 23 46777764
Q ss_pred ccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHhcc
Q 011765 413 FTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLKNHR 466 (478)
Q Consensus 413 ~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 466 (478)
+.++++++|.++|+-. .++.+++.+++.+...... ...-++.+++.+....
T Consensus 429 -D~~~lA~AI~~aL~m~-~~er~~r~~~~~~~v~~~~-~~~Wa~~fl~~l~~~~ 479 (797)
T PLN03063 429 -NITEVSSAIKEALNMS-DEERETRHRHNFQYVKTHS-AQKWADDFMSELNDII 479 (797)
T ss_pred -CHHHHHHHHHHHHhCC-HHHHHHHHHHHHHhhhhCC-HHHHHHHHHHHHHHHh
Confidence 8899999999999821 3455666777776664443 5566676777665443
|
|
| >PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin) | Back alignment and domain information |
|---|
Probab=82.87 E-value=11 Score=30.14 Aligned_cols=37 Identities=16% Similarity=0.221 Sum_probs=32.5
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011765 7 LQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTP 43 (478)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~ 43 (478)
.|+++.+.+..-|-.-+..|+..|.++||+|.++...
T Consensus 1 ~~v~~~~~~~~~~~lGl~~la~~l~~~G~~v~~~d~~ 37 (121)
T PF02310_consen 1 IRVVLACVPGEVHPLGLLYLAAYLRKAGHEVDILDAN 37 (121)
T ss_dssp -EEEEEEBTTSSTSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CEEEEEeeCCcchhHHHHHHHHHHHHCCCeEEEECCC
Confidence 3789999999999999999999999999999987433
|
Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A .... |
| >PRK02261 methylaspartate mutase subunit S; Provisional | Back alignment and domain information |
|---|
Probab=82.86 E-value=2.6 Score=34.83 Aligned_cols=43 Identities=12% Similarity=0.074 Sum_probs=38.4
Q ss_pred CccEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCccc
Q 011765 5 SKLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNID 47 (478)
Q Consensus 5 ~~~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~ 47 (478)
++.+|++.+.++.+|-.-..-++..|..+|++|+++......+
T Consensus 2 ~~~~vl~~~~~gD~H~lG~~iv~~~lr~~G~eVi~LG~~vp~e 44 (137)
T PRK02261 2 KKKTVVLGVIGADCHAVGNKILDRALTEAGFEVINLGVMTSQE 44 (137)
T ss_pred CCCEEEEEeCCCChhHHHHHHHHHHHHHCCCEEEECCCCCCHH
Confidence 4679999999999999999999999999999999999765543
|
|
| >cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis | Back alignment and domain information |
|---|
Probab=82.46 E-value=5.4 Score=41.21 Aligned_cols=77 Identities=9% Similarity=0.002 Sum_probs=46.6
Q ss_pred hhhhhcCCCceeeee---ccCh-hhHHHHHHhCCcEecccccc-chhhHHHHHhhc-CeEEEeeccCCCC-cccHHHHHH
Q 011765 348 QLAILAHDSVGGFLT---HAGW-SSVVEALQFGMPLIVLTCYA-DQGLNAKLLEEK-QIVELIPRDEGDG-FFTRNSVAE 420 (478)
Q Consensus 348 q~~vL~~~~~~~~It---HgG~-~s~~eal~~GvP~l~~P~~~-DQ~~na~~v~~~-g~G~~l~~~~~~~-~~~~~~l~~ 420 (478)
..+++..|++ +|. +=|+ -++.||+++|+|+|.....+ ..... ..+... ..|+.+...+... .-+.++|++
T Consensus 468 y~E~~~g~dl--~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~-E~v~~~~~~gi~V~~r~~~~~~e~v~~La~ 544 (590)
T cd03793 468 YEEFVRGCHL--GVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFME-EHIEDPESYGIYIVDRRFKSPDESVQQLTQ 544 (590)
T ss_pred hHHHhhhceE--EEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhH-HHhccCCCceEEEecCCccchHHHHHHHHH
Confidence 3566777777 664 4565 49999999999999977532 22111 112111 2577775322000 035677888
Q ss_pred HHHHHhc
Q 011765 421 SLRLVLV 427 (478)
Q Consensus 421 ~i~~ll~ 427 (478)
++.++++
T Consensus 545 ~m~~~~~ 551 (590)
T cd03793 545 YMYEFCQ 551 (590)
T ss_pred HHHHHhC
Confidence 8888886
|
GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity. |
| >COG0052 RpsB Ribosomal protein S2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=82.11 E-value=4 Score=36.88 Aligned_cols=33 Identities=27% Similarity=0.247 Sum_probs=25.0
Q ss_pred CCEEE-EcCCcc-cHHHHHHHhCCCeEEEecchHH
Q 011765 111 PDWLL-FDFAAY-WLPARARELGIPSGFFSIFTAA 143 (478)
Q Consensus 111 pD~vI-~D~~~~-~~~~~A~~lgIP~i~~~~~~~~ 143 (478)
||+++ .|+..- -|+.=|.++|||+|.+..+++.
T Consensus 157 Pd~l~ViDp~~e~iAv~EA~klgIPVvAlvDTn~d 191 (252)
T COG0052 157 PDVLFVIDPRKEKIAVKEANKLGIPVVALVDTNCD 191 (252)
T ss_pred CCEEEEeCCcHhHHHHHHHHHcCCCEEEEecCCCC
Confidence 99985 565332 4677799999999999776653
|
|
| >KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=81.85 E-value=51 Score=31.73 Aligned_cols=128 Identities=13% Similarity=-0.069 Sum_probs=78.6
Q ss_pred CCccEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCCCCCCCCccccCCC
Q 011765 4 NSKLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVDNLRENAEATIDL 83 (478)
Q Consensus 4 ~~~~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~~~~~ 83 (478)
+++.|+.++..+-.||--+|.-=|..|++.|.+|.+++.-......+-.. -++|+++.++. ++.- ...
T Consensus 10 ~~k~ra~vvVLGDvGRSPRMqYHA~Sla~~gf~VdliGy~~s~p~e~l~~---hprI~ih~m~~-----l~~~----~~~ 77 (444)
T KOG2941|consen 10 SKKKRAIVVVLGDVGRSPRMQYHALSLAKLGFQVDLIGYVESIPLEELLN---HPRIRIHGMPN-----LPFL----QGG 77 (444)
T ss_pred cccceEEEEEecccCCChHHHHHHHHHHHcCCeEEEEEecCCCChHHHhc---CCceEEEeCCC-----Cccc----CCC
Confidence 45789999999999999999999999999999999988655432211111 26799999973 2210 001
Q ss_pred ChhHHHHHHHHHhhhhHHHHHHHhhcCCCEEEEc-CCcccHHHHH----HHhCCCeEEEecchHHH
Q 011765 84 PYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFD-FAAYWLPARA----RELGIPSGFFSIFTAAT 144 (478)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D-~~~~~~~~~A----~~lgIP~i~~~~~~~~~ 144 (478)
+ .......+.+-+...-+-.++....+|.++.- +-+.+.+.++ ...|-.+++=|....++
T Consensus 78 p-~~~~l~lKvf~Qfl~Ll~aL~~~~~~~~ilvQNPP~iPtliv~~~~~~l~~~KfiIDWHNy~Ys 142 (444)
T KOG2941|consen 78 P-RVLFLPLKVFWQFLSLLWALFVLRPPDIILVQNPPSIPTLIVCVLYSILTGAKFIIDWHNYGYS 142 (444)
T ss_pred c-hhhhhHHHHHHHHHHHHHHHHhccCCcEEEEeCCCCCchHHHHHHHHHHhcceEEEEehhhHHH
Confidence 1 11112222222222233444445577988765 3444444544 44477888877765554
|
|
| >PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT | Back alignment and domain information |
|---|
Probab=81.70 E-value=12 Score=34.88 Aligned_cols=42 Identities=24% Similarity=0.275 Sum_probs=33.6
Q ss_pred EEEeccCChhhhhcCCCceeeeeccChhhHHHHHHhCCcEecccc
Q 011765 340 VVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTC 384 (478)
Q Consensus 340 ~~~~~~vpq~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~ 384 (478)
+.+.+-++-.++|.+++. +||-. ...-.||+.+|+|++++..
T Consensus 185 ~~~~~~~~~~~Ll~~s~~--Vvtin-StvGlEAll~gkpVi~~G~ 226 (269)
T PF05159_consen 185 VIIDDDVNLYELLEQSDA--VVTIN-STVGLEALLHGKPVIVFGR 226 (269)
T ss_pred EEECCCCCHHHHHHhCCE--EEEEC-CHHHHHHHHcCCceEEecC
Confidence 445566788899999988 88875 4577999999999999763
|
Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport |
| >PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases | Back alignment and domain information |
|---|
Probab=81.52 E-value=36 Score=29.76 Aligned_cols=57 Identities=19% Similarity=0.124 Sum_probs=38.2
Q ss_pred cEEEEec---CCC-ccCHHH-HHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEecC
Q 011765 7 LQIAMFP---WLA-FGHMIP-WLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISL 67 (478)
Q Consensus 7 ~~il~~~---~~~-~gH~~p-~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~ 67 (478)
.||.++. .|+ +|-+-- .-.|+..|+++||+||+++.....+...... .++++..+|.
T Consensus 2 kkIaIiGtrGIPa~YGGfET~ve~L~~~l~~~g~~v~Vyc~~~~~~~~~~~y----~gv~l~~i~~ 63 (185)
T PF09314_consen 2 KKIAIIGTRGIPARYGGFETFVEELAPRLVSKGIDVTVYCRSDYYPYKEFEY----NGVRLVYIPA 63 (185)
T ss_pred ceEEEEeCCCCCcccCcHHHHHHHHHHHHhcCCceEEEEEccCCCCCCCccc----CCeEEEEeCC
Confidence 3676663 344 466655 4578889999999999999876654333322 4578887763
|
|
| >PRK13934 stationary phase survival protein SurE; Provisional | Back alignment and domain information |
|---|
Probab=81.52 E-value=32 Score=31.92 Aligned_cols=41 Identities=10% Similarity=0.037 Sum_probs=27.9
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCccccC
Q 011765 7 LQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRL 49 (478)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~ 49 (478)
||||+.-==+. |---+..|+++|...| +|+++.+...+.-+
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~al~~~g-~V~VvAP~~eqSg~ 41 (266)
T PRK13934 1 MKILVTNDDGV-HSPGLRLLYEFVSPLG-EVDVVAPETPKSAT 41 (266)
T ss_pred CeEEEEcCCCC-CCHHHHHHHHHHHhCC-cEEEEccCCCCccc
Confidence 56666543333 2244788999998887 79998888765433
|
|
| >PF01012 ETF: Electron transfer flavoprotein domain; InterPro: IPR014730 Electron transfer flavoproteins (ETFs) serve as specific electron acceptors for primary dehydrogenases, transferring the electrons to terminal respiratory systems | Back alignment and domain information |
|---|
Probab=80.41 E-value=7.2 Score=33.26 Aligned_cols=105 Identities=21% Similarity=0.273 Sum_probs=59.3
Q ss_pred EEEecCCCccCHHH----HHHHHHHHHhC-CCeEEEEeCCCccccC-------CCCCCCCCCCe-EEEEecCCCCCCCCC
Q 011765 9 IAMFPWLAFGHMIP----WLELAKLIAQK-GHKIFFISTPRNIDRL-------PRLPQNLASMI-QFVKISLPHVDNLRE 75 (478)
Q Consensus 9 il~~~~~~~gH~~p----~l~La~~L~~r-Gh~Vt~~~~~~~~~~~-------~~~g~~~~~~i-~~~~i~~~~~~~l~~ 75 (478)
|+++.-...|.+++ ++..|++|++. |.+|+.++.....+.. ...| + +.+.+.. +.+.
T Consensus 2 ilv~~e~~~~~l~~~~~e~l~~A~~La~~~g~~v~av~~G~~~~~~~~l~~~l~~~G------~d~v~~~~~---~~~~- 71 (164)
T PF01012_consen 2 ILVFAEHRDGRLNPVSLEALEAARRLAEALGGEVTAVVLGPAEEAAEALRKALAKYG------ADKVYHIDD---PALA- 71 (164)
T ss_dssp EEEEE-EETCEE-HHHHHHHHHHHHHHHCTTSEEEEEEEETCCCHHHHHHHHHHSTT------ESEEEEEE----GGGT-
T ss_pred EEEEEECCCCccCHHHHHHHHHHHHHHhhcCCeEEEEEEecchhhHHHHhhhhhhcC------CcEEEEecC---cccc-
Confidence 44444433555555 68889999985 8888877765322211 2234 3 2333321 0000
Q ss_pred CccccCCCChhHHHHHHHHHhhhhHHHHHHHhhcCCCEEEEcCCcc---cHHHHHHHhCCCeEEEec
Q 011765 76 NAEATIDLPYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAAY---WLPARARELGIPSGFFSI 139 (478)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~~---~~~~~A~~lgIP~i~~~~ 139 (478)
..........+.+++++.+||+|+.-.... .+..+|.+||.|++.-..
T Consensus 72 ----------------~~~~~~~a~~l~~~~~~~~~~lVl~~~t~~g~~la~~lA~~L~~~~v~~v~ 122 (164)
T PF01012_consen 72 ----------------EYDPEAYADALAELIKEEGPDLVLFGSTSFGRDLAPRLAARLGAPLVTDVT 122 (164)
T ss_dssp ----------------TC-HHHHHHHHHHHHHHHT-SEEEEESSHHHHHHHHHHHHHHT-EEEEEEE
T ss_pred ----------------ccCHHHHHHHHHHHHHhcCCCEEEEcCcCCCCcHHHHHHHHhCCCccceEE
Confidence 001133555777788889999999876444 356789999999997544
|
They can be functionally classified into constitutive, "housekeeping" ETFs, mainly involved in the oxidation of fatty acids (Group I), and ETFs produced by some prokaryotes under specific growth conditions, receiving electrons only from the oxidation of specific substrates (Group II) []. ETFs are heterodimeric proteins composed of an alpha and beta subunit, and contain an FAD cofactor and AMP [, , , , ]. ETF consists of three domains: domains I and II are formed by the N- and C-terminal portions of the alpha subunit, respectively, while domain III is formed by the beta subunit. Domains I and III share an almost identical alpha-beta-alpha sandwich fold, while domain II forms an alpha-beta-alpha sandwich similar to that of bacterial flavodoxins. FAD is bound in a cleft between domains II and III, while domain III binds the AMP molecule. Interactions between domains I and III stabilise the protein, forming a shallow bowl where domain II resides. This entry represents the N-terminal domain of both the alpha and beta subunits from Group I and Group II ETFs.; PDB: 1EFP_B 3FET_B 3IH5_B 2A1T_S 1EFV_B 1T9G_S 2A1U_B 1O96_E 1O94_C 3CLU_C .... |
| >PRK02797 4-alpha-L-fucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=80.23 E-value=40 Score=31.98 Aligned_cols=82 Identities=22% Similarity=0.300 Sum_probs=56.8
Q ss_pred CcEE-EeccCCh---hhhhcCCCceeeeec--cChhhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeeccCCCC
Q 011765 338 RGVV-YTSWAPQ---LAILAHDSVGGFLTH--AGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDG 411 (478)
Q Consensus 338 ~n~~-~~~~vpq---~~vL~~~~~~~~ItH--gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~~~ 411 (478)
+++. ...++|. .++|+.++++.|+++ =|.||++-.++.|+|+++-. |-.-=+-+.+.|+-+..+.+.
T Consensus 206 ~~~~~L~e~l~f~eYl~lL~~~Dl~~f~~~RQQgiGnl~lLi~~G~~v~l~r----~n~fwqdl~e~gv~Vlf~~d~--- 278 (322)
T PRK02797 206 ENFQILTEKLPFDDYLALLRQCDLGYFIFARQQGIGTLCLLIQLGKPVVLSR----DNPFWQDLTEQGLPVLFTGDD--- 278 (322)
T ss_pred ccEEehhhhCCHHHHHHHHHhCCEEEEeechhhHHhHHHHHHHCCCcEEEec----CCchHHHHHhCCCeEEecCCc---
Confidence 4543 4567765 668999999888875 48999999999999999843 211112256678887766666
Q ss_pred cccHHHHHHHHHHHhc
Q 011765 412 FFTRNSVAESLRLVLV 427 (478)
Q Consensus 412 ~~~~~~l~~~i~~ll~ 427 (478)
++...+.++=+++..
T Consensus 279 -L~~~~v~e~~rql~~ 293 (322)
T PRK02797 279 -LDEDIVREAQRQLAS 293 (322)
T ss_pred -ccHHHHHHHHHHHHh
Confidence 777777665444443
|
|
| >TIGR00087 surE 5'/3'-nucleotidase SurE | Back alignment and domain information |
|---|
Probab=80.04 E-value=27 Score=32.07 Aligned_cols=115 Identities=15% Similarity=0.170 Sum_probs=60.6
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCCCCCCCCccccCCCChh
Q 011765 7 LQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVDNLRENAEATIDLPYD 86 (478)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~~~~~~~~ 86 (478)
||||+.-==+. |---+..|+++|++.| +|+++.+...+.-+...- .....+++..++.. ++. ........+
T Consensus 1 M~ILltNDDGi-~a~Gi~aL~~~l~~~g-~V~VvAP~~~~Sg~g~ai-t~~~pl~~~~~~~~--~~~--~~~~v~GTP-- 71 (244)
T TIGR00087 1 MKILLTNDDGI-HSPGIRALYQALKELG-EVTVVAPARQRSGTGHSL-TLFEPLRVGQVKVK--NGA--HIYAVDGTP-- 71 (244)
T ss_pred CeEEEECCCCC-CCHhHHHHHHHHHhCC-CEEEEeCCCCccccccCc-CCCCCeEEEEeccC--CCc--cEEEEcCcH--
Confidence 56665532221 2233678899999988 899999888765443221 12233555444310 000 000001111
Q ss_pred HHHHHHHHHhhhhHHHHHHHhhcCCCEEEEcC----------Cc---ccHHHHHHHhCCCeEEEec
Q 011765 87 EVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDF----------AA---YWLPARARELGIPSGFFSI 139 (478)
Q Consensus 87 ~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~----------~~---~~~~~~A~~lgIP~i~~~~ 139 (478)
.+...-.+..++ ..+||+||+.. +. ..|.+-|..+|||.|.++.
T Consensus 72 --------aDcv~~gl~~l~-~~~pDLVvSGiN~G~N~g~~v~ySGTVgAA~ea~~~GipaiA~S~ 128 (244)
T TIGR00087 72 --------TDCVILGINELM-PEVPDLVISGINAGENLGTDVTYSGTVGAAMEAAIHGVPAIAISL 128 (244)
T ss_pred --------HHHHHHHHHHhc-cCCCCeEEeccccCCCCCccEecchhHHHHHHHHHcCCCeEEEEe
Confidence 111222333343 34699999764 11 1345667888999999865
|
E. coli SurE is Recommended cutoffs are 15 for homology, 40 for probable orthology, and 200 for orthology with full-length homology. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 478 | ||||
| 2vce_A | 480 | Characterization And Engineering Of The Bifunctiona | 3e-42 | ||
| 2c1x_A | 456 | Structure And Activity Of A Flavonoid 3-O Glucosylt | 1e-31 | ||
| 3hbf_A | 454 | Structure Of Ugt78g1 Complexed With Myricetin And U | 7e-31 | ||
| 2pq6_A | 482 | Crystal Structure Of Medicago Truncatula Ugt85h2- I | 4e-27 | ||
| 2acv_A | 463 | Crystal Structure Of Medicago Truncatula Ugt71g1 Le | 3e-25 | ||
| 2acw_A | 465 | Crystal Structure Of Medicago Truncatula Ugt71g1 Co | 3e-25 | ||
| 2iyf_A | 430 | The Crystal Structure Of Macrolide Glycosyltransfer | 2e-07 | ||
| 2iya_A | 424 | The Crystal Structure Of Macrolide Glycosyltransfer | 3e-06 | ||
| 2o6l_A | 170 | Crystal Structure Of The Udp-Glucuronic Acid Bindin | 6e-05 |
| >pdb|2VCE|A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants Length = 480 | Back alignment and structure |
|
| >pdb|2C1X|A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification Length = 456 | Back alignment and structure |
|
| >pdb|3HBF|A Chain A, Structure Of Ugt78g1 Complexed With Myricetin And Udp Length = 454 | Back alignment and structure |
|
| >pdb|2PQ6|A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights Into The Structural Basis Of A Multifunctional (Iso) Flavonoid Glycosyltransferase Length = 482 | Back alignment and structure |
|
| >pdb|2ACV|A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Length = 463 | Back alignment and structure |
|
| >pdb|2ACW|A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose Length = 465 | Back alignment and structure |
|
| >pdb|2IYF|A Chain A, The Crystal Structure Of Macrolide Glycosyltransferases: A Blueprint For Antibiotic Engineering Length = 430 | Back alignment and structure |
|
| >pdb|2IYA|A Chain A, The Crystal Structure Of Macrolide Glycosyltransferases: A Blueprint For Antibiotic Engineering Length = 424 | Back alignment and structure |
|
| >pdb|2O6L|A Chain A, Crystal Structure Of The Udp-Glucuronic Acid Binding Domain Of The Human Drug Metabolizing Udp-Glucuronosyltransferase 2b7 Length = 170 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 478 | |||
| 3hbf_A | 454 | Flavonoid 3-O-glucosyltransferase; glycosyltransfe | 1e-99 | |
| 2vch_A | 480 | Hydroquinone glucosyltransferase; glycosyltransfer | 4e-98 | |
| 2c1x_A | 456 | UDP-glucose flavonoid 3-O glycosyltransferase; WIN | 4e-93 | |
| 2pq6_A | 482 | UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl | 1e-87 | |
| 2acv_A | 463 | Triterpene UDP-glucosyl transferase UGT71G1; glyco | 2e-87 | |
| 2iya_A | 424 | OLEI, oleandomycin glycosyltransferase; carbohydra | 8e-32 | |
| 2iyf_A | 430 | OLED, oleandomycin glycosyltransferase; antibiotic | 3e-28 | |
| 3ia7_A | 402 | CALG4; glycosysltransferase, calicheamicin, enediy | 4e-20 | |
| 2o6l_A | 170 | UDP-glucuronosyltransferase 2B7; drug metabolism, | 6e-20 | |
| 3rsc_A | 415 | CALG2; TDP, enediyne, structural genomics, PSI-2, | 1e-18 | |
| 2yjn_A | 441 | ERYCIII, glycosyltransferase; transferase, cytochr | 1e-15 | |
| 3tsa_A | 391 | SPNG, NDP-rhamnosyltransferase; glycosyltransferas | 6e-14 | |
| 3h4t_A | 404 | Glycosyltransferase GTFA, glycosyltransferase; van | 1e-13 | |
| 1rrv_A | 416 | Glycosyltransferase GTFD; GT-B, glycosyltransferas | 9e-13 | |
| 3otg_A | 412 | CALG1; calicheamicin, TDP, structural genomics, PS | 1e-12 | |
| 2p6p_A | 384 | Glycosyl transferase; X-RAY-diffraction,urdamycina | 1e-12 | |
| 1iir_A | 415 | Glycosyltransferase GTFB; rossmann fold; 1.80A {Am | 5e-12 | |
| 4fzr_A | 398 | SSFS6; structural genomics, PSI-biology, protein s | 2e-11 | |
| 3oti_A | 398 | CALG3; calicheamicin, TDP, structural genomics, PS | 1e-10 |
| >3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} PDB: 3hbj_A* Length = 454 | Back alignment and structure |
|---|
Score = 305 bits (784), Expect = 1e-99
Identities = 121/478 (25%), Positives = 197/478 (41%), Gaps = 45/478 (9%)
Query: 1 MADNSKLQIAMFPWLAFGHMIPWLELAKLIAQKGHKI---FFISTPRNIDRLPRLPQNLA 57
M N+ L +A+ + H P L L K IA + K+ FF +T N R + L
Sbjct: 8 MNGNNLLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSNEFLP 67
Query: 58 SMIQFVKISLPHVDNLRENAEATIDLPYDEVKYLKQSFDCLEEPMAKLLQSLAP--DWLL 115
+ I++ + D L + ++ + ++K + + + + + L+
Sbjct: 68 N-IKYYNVH----DGLPKGYVSSGNPREPIFLFIKAMQENFKHVIDEAVAETGKNITCLV 122
Query: 116 FDFAAYWLPARARELGIPSGFFSIFTAATLGYFGPSSVLINDSGD-HLKTPEDYTRVPNW 174
D ++ A E+ +L + ++ +G + + +P
Sbjct: 123 TDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREKTGSKEVHDVKSIDVLPG- 181
Query: 175 VSFPTTISYRLFEARKVFDILISDESNVSHG--YRFGQSLKGCDIVAVRSCMEFEPEWLK 232
FP +A + + +I D ++ G L + VA+ S P
Sbjct: 182 --FPE------LKASDLPEGVIKDIDVPFATMLHKMGLELPRANAVAINSFATIHPLIEN 233
Query: 233 LLEQLHRKPVIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQ 292
L K ++ VG TT E EWLD+ E SVVY++FGS P
Sbjct: 234 ELNS-KFKLLLNVGPFNLTTPQRKVSDEHG----CLEWLDQHENSSVVYISFGSVVTPPP 288
Query: 293 EELTEIALGLELSKLPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAIL 352
ELT +A LE PF W + +LP GF ERT+ +G + +WAPQ+ IL
Sbjct: 289 HELTALAESLEECGFPFIWSFR------GDPKEKLPKGFLERTKTKGKI-VAWAPQVEIL 341
Query: 353 AHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEK-QI-VELIPRDEGD 410
H SVG FLTH+GW+SV+E + G+P+I + DQGLN L E +I V + +
Sbjct: 342 KHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGV-----DN 396
Query: 411 GFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGL----FGDKGRHDRYVDNFLNYLKN 464
G T+ S+ ++L L + EKG I R K ++K G + + +
Sbjct: 397 GVLTKESIKKALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVTS 454
|
| >2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A* Length = 480 | Back alignment and structure |
|---|
Score = 302 bits (776), Expect = 4e-98
Identities = 131/485 (27%), Positives = 200/485 (41%), Gaps = 33/485 (6%)
Query: 1 MADNSKLQIAMFPWLAFGHMIPWLELAK-LIAQKGHKIFFISTPRNIDRLPRLPQNLASM 59
M ++ +A+ P GH+IP +E AK L+ G + F+ + +
Sbjct: 1 MEESKTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLDSLP 60
Query: 60 IQFVKISLPHVDNLRENAEATIDLPYDEVKYLKQSFDCLEEPMAKLLQSLAP-DWLLFDF 118
+ LP VD + ++ + + +S L + ++ L+ D
Sbjct: 61 SSISSVFLPPVDL--TDLSSSTRIESRISLTVTRSNPELRKVFDSFVEGGRLPTALVVDL 118
Query: 119 AAYWLPARARELGIPSGFFSIFTAATLGYFGPSSVLINDSGDHLKTPEDYTRVPNWVSFP 178
A E +P F TA L +F L + + +P V
Sbjct: 119 FGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSCEFRELTEPLMLPGCVPVA 178
Query: 179 TTISYRLFEARKVFDILISDESNVSHGY-RFGQSLKGCDIVAVRSCMEFEPEWLKLLEQL 237
+ D + + + K + + V + E EP +K L++
Sbjct: 179 ---------GKDFLDPAQDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEP 229
Query: 238 HRK--PVIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEEL 295
PV PVG L E +WLD Q GSV+YV+FGS + E+L
Sbjct: 230 GLDKPPVYPVGPLVNIGKQEAKQTEES---ECLKWLDNQPLGSVLYVSFGSGGTLTCEQL 286
Query: 296 TEIALGLELSKLPFFWVLKKRLGQADTEPIE----------LPDGFEERTRGRGVVYTSW 345
E+ALGL S+ F WV++ G A++ + LP GF ERT+ RG V W
Sbjct: 287 NELALGLADSEQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFW 346
Query: 346 APQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIP 405
APQ +LAH S GGFLTH GW+S +E++ G+PLI YA+Q +NA LL E L P
Sbjct: 347 APQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRP 406
Query: 406 RDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGL----FGDKGRHDRYVDNFLNY 461
R DG R VA ++ ++ E+G+ R+K KE+K D G + +
Sbjct: 407 RAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVALK 466
Query: 462 LKNHR 466
K H+
Sbjct: 467 WKAHK 471
|
| >2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A* Length = 456 | Back alignment and structure |
|---|
Score = 289 bits (741), Expect = 4e-93
Identities = 107/482 (22%), Positives = 193/482 (40%), Gaps = 44/482 (9%)
Query: 1 MADNS-KLQIAMFPWLAFGHMIPWLELAKLIAQKGHKI---FFISTPRNIDRLPRLPQNL 56
M+ + +A+ + H P L + + +A FF ++ N +
Sbjct: 1 MSQTTTNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMHTM 60
Query: 57 ASMIQFVKISLPHVDNLRENAEATIDLPYDEVKYLKQSFDCLEEPMAKLLQSLAPD--WL 114
I+ IS D + E D + + + + + M + L
Sbjct: 61 QCNIKSYDIS----DGVPEGYVFAGRPQEDIELFTRAAPESFRQGMVMAVAETGRPVSCL 116
Query: 115 LFDFAAYWLPARARELGIPSGFFSIFTAATL-GYFGPSSVLINDSGDHLKTPEDYTRVPN 173
+ D ++ A E+G+ F +L + I + + N
Sbjct: 117 VADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHV--YIDEIREKIGVSGIQGREDELLN 174
Query: 174 WVSFPTTISYRLFEARKVFDILISDESN---VSHGYRFGQSLKGCDIVAVRSCMEFEPEW 230
++ P R R + + ++ N +R GQ L V + S E +
Sbjct: 175 FI--PGMSKVRF---RDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSL 229
Query: 231 LKLLEQLHRKPVIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKP 290
L+ K + +G T +WL E++ SVVY++FG+ P
Sbjct: 230 TNDLKS-KLKTYLNIGPFNLITPPPVVPNT----TGCLQWLKERKPTSVVYISFGTVTTP 284
Query: 291 SQEELTEIALGLELSKLPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLA 350
E+ ++ LE S++PF W L+ D + LP+GF E+TRG G+V WAPQ
Sbjct: 285 PPAEVVALSEALEASRVPFIWSLR------DKARVHLPEGFLEKTRGYGMV-VPWAPQAE 337
Query: 351 ILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEK-QI-VELIPRDE 408
+LAH++VG F+TH GW+S+ E++ G+PLI + DQ LN +++E+ +I V +
Sbjct: 338 VLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRI----- 392
Query: 409 GDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGL----FGDKGRHDRYVDNFLNYLKN 464
G FT++ + +L +EKG+ R+ + ++ G KG ++ +
Sbjct: 393 EGGVFTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVSK 452
Query: 465 HR 466
+
Sbjct: 453 PK 454
|
| >2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10 Length = 482 | Back alignment and structure |
|---|
Score = 275 bits (706), Expect = 1e-87
Identities = 114/491 (23%), Positives = 190/491 (38%), Gaps = 43/491 (8%)
Query: 4 NSKLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLA----SM 59
N K + M P+ GH+ P +LAKL+ +G I F++T N RL + A +
Sbjct: 6 NRKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTD 65
Query: 60 IQFVKISLPHVDNLRENAEATIDLPYDEVKYLKQSFDCLEEPMAKLLQSLA-------PD 112
F I D L E D+ D + +P +LL L
Sbjct: 66 FNFESIP----DGL-TPMEGDGDVSQDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVT 120
Query: 113 WLLFDFAAYWLPARARELGIPSGFFSIFTAATL-GYF----GPSSVLINDSGDHLKTPED 167
L+ D + A E +P+ + +A +L +I + T
Sbjct: 121 CLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVERGIIPFKDESYLTNGC 180
Query: 168 YTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFE 227
+W+ P ++RL + ++ + + + + + E E
Sbjct: 181 LETKVDWI--PGLKNFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELE 238
Query: 228 PEWLKLLEQLHRKPVIPVGQLPTTTGDGDSDAETDTWRS--IKE------WLDEQEKGSV 279
+ + L + P+G LP+ + D+ S KE WL+ +E GSV
Sbjct: 239 SDVINALSS-TIPSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSV 297
Query: 280 VYVAFGSEAKPSQEELTEIALGLELSKLPFFWVLKKRLGQADTEPIELPDGFEERTRGRG 339
VYV FGS + E+L E A GL K F W++ R + F RG
Sbjct: 298 VYVNFGSTTVMTPEQLLEFAWGLANCKKSFLWII--RPDLVIGGSVIFSSEFTNEIADRG 355
Query: 340 VVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQ 399
++ SW PQ +L H S+GGFLTH GW+S E++ G+P++ +ADQ + + +
Sbjct: 356 LI-ASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQPTDCRFICN-- 412
Query: 400 IVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGL----FGDKGRHDRYV 455
E E D R +A+ + V+ +KG+ + KA E+K G +
Sbjct: 413 --EWEIGMEIDTNVKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNL 470
Query: 456 DNFLNYLKNHR 466
+ + + +
Sbjct: 471 NKVIKDVLLKQ 481
|
| >2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A* Length = 463 | Back alignment and structure |
|---|
Score = 274 bits (703), Expect = 2e-87
Identities = 107/456 (23%), Positives = 182/456 (39%), Gaps = 35/456 (7%)
Query: 1 MAD-NSKLQIAMFPWLAFGHMIPWLELAKLIAQKGH--KIFFISTPRNIDRLPR--LPQN 55
M+D N ++ P GH+ LE AKL+ I +
Sbjct: 3 MSDINKNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSV 62
Query: 56 LASMIQFVKISLPHVDNLRENAEATIDLPYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLL 115
LAS Q I LP V+ E + + +L+ ++ + +L + L+
Sbjct: 63 LASQPQIQLIDLPEVEP--PPQELLKSPEFYILTFLESLIPHVKATIKTILSN-KVVGLV 119
Query: 116 FDFAAYWLPARARELGIPSGFFSIFTAATLGYFGPSSVLINDSGDHLKTPEDYTRVPNWV 175
DF + E GIPS F L L N + + D +
Sbjct: 120 LDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLM---LSLKNRQIEEVFDDSDRDHQLLNI 176
Query: 176 -SFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLL 234
+ + D + + Y+ + + + V + + E + L
Sbjct: 177 PGISNQVPSNVLP-----DACFNKDGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDAL 231
Query: 235 EQLHRK--PVIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKP-S 291
K P+ VG L G + + I +WLDEQ SVV++ FGS
Sbjct: 232 YDHDEKIPPIYAVGPLLDLKGQPNPKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFG 291
Query: 292 QEELTEIALGLELSKLPFFWVLKKRLGQADTEPIELPDGFEE--RTRGRGVVYTSWAPQL 349
++ EIALGL+ S + F W E P+GF E G+G++ WAPQ+
Sbjct: 292 PSQIREIALGLKHSGVRFLWSNSA-------EKKVFPEGFLEWMELEGKGMI-CGWAPQV 343
Query: 350 AILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEK-QI-VEL-IPR 406
+LAH ++GGF++H GW+S++E++ FG+P++ YA+Q LNA L ++ + + L +
Sbjct: 344 EVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDY 403
Query: 407 DEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMK 442
+G + + L+ ++ ++ K +EMK
Sbjct: 404 RKGSDVVAAEEIEKGLKDLMDKDSIV--HKKVQEMK 437
|
| >2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} Length = 424 | Back alignment and structure |
|---|
Score = 125 bits (316), Expect = 8e-32
Identities = 78/451 (17%), Positives = 144/451 (31%), Gaps = 54/451 (11%)
Query: 9 IAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLP 68
I+ F GH+ P L + + + +GH++ + T ++ V
Sbjct: 15 ISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKAAG------ATPV----V 64
Query: 69 HVDNLRENAEATIDLPYDEVKYLKQSFDCLEEPMAKLLQSLA---PDWLLFDFAAYWLPA 125
+ L + + P D+ + D + +L + A PD +++D A++ P
Sbjct: 65 YDSILPKESNPEESWPEDQESAMGLFLDEAVRVLPQLEDAYADDRPDLIVYDIASWPAPV 124
Query: 126 RARELGIPSGFFSIFTAATLGYFGPSSVLINDSGDHLKTPEDYTRVPNWVSFPTTISYRL 185
R+ IP S A G+ + D + P +
Sbjct: 125 LGRKWDIPFVQLSPTFVAYEGFEEDVPAV----QDPTADRGEEAAAPAGTGDAEEGAEAE 180
Query: 186 FEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLHRKPVIPV 245
+ F L + + L + V F+ + V
Sbjct: 181 DGLVRFFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQIK-----GDTVGDNYTFV 235
Query: 246 GQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELS 305
G S W + V+ +A GS + ++
Sbjct: 236 GPTY----GDRSHQG--------TWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGL 283
Query: 306 KLPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAG 365
+ + + AD +P E V W PQL IL S F+THAG
Sbjct: 284 DWHVVLSVGRFVDPADLGE--VPPNVE-------VH--QWVPQLDILTKASA--FITHAG 330
Query: 366 WSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLV 425
S +EAL +P++ + A+Q +NA+ + E + IPRD+ T + E++ V
Sbjct: 331 MGSTMEALSNAVPMVAVPQIAEQTMNAERIVELGLGRHIPRDQ----VTAEKLREAVLAV 386
Query: 426 LVEEKGQIYRDKAKEMKGLFGDKGRHDRYVD 456
+ ++ ++ + G D
Sbjct: 387 ASDPG---VAERLAAVRQEIREAGGARAAAD 414
|
| >2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} Length = 430 | Back alignment and structure |
|---|
Score = 115 bits (289), Expect = 3e-28
Identities = 86/449 (19%), Positives = 142/449 (31%), Gaps = 67/449 (14%)
Query: 9 IAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLP 68
IAMF A GH+ P LE+ + + +GH++ + P D++ + V
Sbjct: 10 IAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAATG------PRPVLYH-S 62
Query: 69 HVDNLRENAEATIDLPYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAAYWLPARAR 128
+ + EA D V+ +A PD +L D +Y AR
Sbjct: 63 TLPGPDADPEAWGSTLLDNVEPFLNDAIQALPQLADAYADDIPDLVLHDITSYPARVLAR 122
Query: 129 ELGIPSGFFSIFTAATLGYFGPSSVLINDSGDHLKTPEDYTRVPNWVSFPTTISYRLFEA 188
G+P+ S A GY E R P R
Sbjct: 123 RWGVPAVSLSPNLVAWKGYEEE-------------VAEPMWREPRQTERGRAYYARFEAW 169
Query: 189 RKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLHRKPVIPVGQL 248
K I ++ SH R +V + ++ + + VG
Sbjct: 170 LKENGITEHPDTFASHPPRS--------LVLIPKALQPHADRV------DEDVYTFVGAC 215
Query: 249 PTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELSKLP 308
+ W VV V+ GS E LP
Sbjct: 216 QGDRAE------------EGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAF--GNLP 261
Query: 309 FFWVLKKRLGQADTEPI-ELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWS 367
+ ++ + + + ELPD V W PQLAIL + F+THAG
Sbjct: 262 GWHLVLQIGRKVTPAELGELPDN---------VEVHDWVPQLAILRQADL--FVTHAGAG 310
Query: 368 SVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLV 427
E L P+I + DQ NA +L+ + + +E T + + E+ ++
Sbjct: 311 GSQEGLATATPMIAVPQAVDQFGNADMLQGLGVARKLATEE----ATADLLRETALALVD 366
Query: 428 EEKGQIYRDKAKEMKGLFGDKGRHDRYVD 456
+ + + + ++ +G R D
Sbjct: 367 DPE---VARRLRRIQAEMAQEGGTRRAAD 392
|
| >3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} Length = 402 | Back alignment and structure |
|---|
Score = 90.9 bits (226), Expect = 4e-20
Identities = 70/450 (15%), Positives = 135/450 (30%), Gaps = 67/450 (14%)
Query: 9 IAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLP 68
I GH+ P L L +A++GH+I +++TP D + A+ + V
Sbjct: 7 ILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEV------KAAGAEVVLYKSE 60
Query: 69 HVDNLRENAEATIDLPYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAAY-WLPARA 127
D + + + L PD +++D + A
Sbjct: 61 FDTFHVPEVVKQEDAETQLHLVYVRENVAILRAAEEALGDNPPDLVVYDVFPFIAGRLLA 120
Query: 128 RELGIPSGFFSIFTAATLGYFGPSSVLINDSGDHLKTPEDYTRVPNWVSFPTTISYRLFE 187
P+ + AA Y + ++ H E L +
Sbjct: 121 ARWDRPAVRLTGGFAANEHYSLFKELWKSNGQRHPADVEAVHS-------------VLVD 167
Query: 188 ARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLHRKPVIPVGQ 247
+ + + + F P+ + + + VG
Sbjct: 168 LLGKYGVDTPVKEYWDEIEGL--------------TIVFLPKSFQPFAETFDERFAFVGP 213
Query: 248 LPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELSKL 307
G W + V+ V+ G++ E A +
Sbjct: 214 TL----TGRDGQP--------GWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPW 261
Query: 308 PFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWS 367
+ L A P LP E W P ++LAH LTH
Sbjct: 262 HVVMAIGGFLDPAVLGP--LPPNVE-------AH--QWIPFHSVLAHARA--CLTHGTTG 308
Query: 368 SVVEALQFGMPLIVLTCYA-DQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVL 426
+V+EA G+PL+++ +A + +A+ + E + ++ D+ S+ E++ +
Sbjct: 309 AVLEAFAAGVPLVLVPHFATEAAPSAERVIELGLGSVLRPDQ----LEPASIREAVERLA 364
Query: 427 VEEKGQIYRDKAKEMKGLFGDKGRHDRYVD 456
+ R++ + M+ G R D
Sbjct: 365 ADSA---VRERVRRMQRDILSSGGPARAAD 391
|
| >2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} Length = 170 | Back alignment and structure |
|---|
Score = 85.7 bits (213), Expect = 6e-20
Identities = 32/183 (17%), Positives = 70/183 (38%), Gaps = 25/183 (13%)
Query: 267 IKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELSKLP--FFWVLKKRLGQADTEP 324
+++++ + VV + GS EE + L+++P W +P
Sbjct: 11 MEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASA-LAQIPQKVLWRFD------GNKP 63
Query: 325 IELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTC 384
L W PQ +L H F+TH G + + EA+ G+P++ +
Sbjct: 64 DTLGLN---------TRLYKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPL 114
Query: 385 YADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGL 444
+ADQ N ++ + + + + + +L+ V+ + Y++ ++ +
Sbjct: 115 FADQPDNIAHMKARGAAVRVDFNT----MSSTDLLNALKRVINDPS---YKENVMKLSRI 167
Query: 445 FGD 447
D
Sbjct: 168 QHD 170
|
| >3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* Length = 415 | Back alignment and structure |
|---|
Score = 87.1 bits (216), Expect = 1e-18
Identities = 68/436 (15%), Positives = 142/436 (32%), Gaps = 70/436 (16%)
Query: 9 IAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLP 68
+ + + G ++P L + + ++GH++ +++ + + A+ V
Sbjct: 23 LLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPV------RAAGATVVPYQSE 76
Query: 69 HVDNLRENAEATIDLPYD-EVKYLKQSFDCLEEPMAKLLQSLAPDWLLFD-FAAYWLPAR 126
+D + DL + YL+++ L A+ L PD +L+D F
Sbjct: 77 IIDADAAEVFGSDDLGVRPHLMYLRENVSVLRA-TAEALDGDVPDLVLYDDFPFIAGQLL 135
Query: 127 ARELGIPS-GFFSIFTAATLGYFGPSSVLINDSGDHLKTPEDYTRVPNWVSFPTTISYRL 185
A P+ + F + F V + + D L P + + ++
Sbjct: 136 AARWRRPAVRLSAAFASNEHYSFSQDMVTLAGTIDPLDLPVFRDTLRDLLA-------EH 188
Query: 186 FEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLHRKPVIPV 245
+R V D E + V F+ ++ V
Sbjct: 189 GLSRSVVDCWNHVE----------------QLNLVFVPKAFQIAGDTFDDRFV-----FV 227
Query: 246 GQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELS 305
G P EW + VV V+ G+ + A +
Sbjct: 228 G--PCFDDRRFLG----------EWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQ 275
Query: 306 KLPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAG 365
L ++ A LP E W P + +L +V +TH G
Sbjct: 276 PWHVVMTLGGQVDPAALGD--LPPNVE-------AH--RWVPHVKVLEQATV--CVTHGG 322
Query: 366 WSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLV 425
+++EAL +G PL+V+ D A+ +++ + ++P ++ +++ ++ V
Sbjct: 323 MGTLMEALYWGRPLVVVPQSFDVQPMARRVDQLGLGAVLPGEK----ADGDTLLAAVGAV 378
Query: 426 LVEEKGQIYRDKAKEM 441
+ + + M
Sbjct: 379 AADPA---LLARVEAM 391
|
| >2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} Length = 441 | Back alignment and structure |
|---|
Score = 77.5 bits (191), Expect = 1e-15
Identities = 67/459 (14%), Positives = 141/459 (30%), Gaps = 86/459 (18%)
Query: 5 SKLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRL----------PQ 54
S +++ + H+ + LA GH++ +++P + +
Sbjct: 19 SHMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITAAGLTAVPVGTDVD 78
Query: 55 NLASMIQFVKISLPHVDNLRENAEATIDLPYDEVKYLKQSF----------DCLEEPMAK 104
+ M + +V +L + L ++ + ++ D L E M
Sbjct: 79 LVDFMTHAGHDIIDYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVS 138
Query: 105 LLQSLAPDWLLFDFAAYWLPARARELGIPSGFFSIFTAATLGYFGPSSVLINDSGDHLKT 164
+ PD ++++ + P A G P T L+ D + +
Sbjct: 139 FCRKWRPDLVIWEPLTFAAPIAAAVTGTPHARLLWGPDITTRARQNFLGLLPDQPEEHRE 198
Query: 165 PEDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCM 224
+ + ++G ++V + +
Sbjct: 199 DPLAEWLTWTLE------------------------------KYGGPAFDEEVVVGQWTI 228
Query: 225 EFEPEWLKLLEQLHRKPVIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAF 284
+ P ++L L + V +G S EWL ++ + V +
Sbjct: 229 DPAPAAIRLDTGLKTVGMRYVDY------NGPSVVP--------EWLHDEPERRRVCLTL 274
Query: 285 GSEAKPSQEELTEIALGLE-LSKLPFFWVLKKRLGQADTEPI-ELPDGFEERTRGRGVVY 342
G ++ + I L + + + E + +PD V
Sbjct: 275 GISSRENSIGQVSIEELLGAVGDVDAEIIA--TFDAQQLEGVANIPDN---------VRT 323
Query: 343 TSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVE 402
+ P A+L + + H G S A G+P ++L D G+ A+ +E
Sbjct: 324 VGFVPMHALLPTCAA--TVHHGGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQEFGAGI 381
Query: 403 LIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEM 441
+P E T + + ES++ VL + +R A M
Sbjct: 382 ALPVPE----LTPDQLRESVKRVLDDPA---HRAGAARM 413
|
| >3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* Length = 391 | Back alignment and structure |
|---|
Score = 72.5 bits (178), Expect = 6e-14
Identities = 26/173 (15%), Positives = 51/173 (29%), Gaps = 16/173 (9%)
Query: 269 EWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELSKLPFFWVLKKRLGQADTEPIELP 328
W + V + G + + ++LP + + +LP
Sbjct: 210 AWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAATELPGVEAVIAVPPEHRALLTDLP 269
Query: 329 DGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQ 388
D P L + + G + A + G+P +VL Y DQ
Sbjct: 270 DN---------ARIAESVPLNLFLRTCEL--VICAGGSGTAFTATRLGIPQLVLPQYFDQ 318
Query: 389 GLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEM 441
A+ L +P ++ +S+ VL + + A ++
Sbjct: 319 FDYARNLAAAGAGICLPDEQAQ--SDHEQFTDSIATVLGDTG---FAAAAIKL 366
|
| >1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 Length = 416 | Back alignment and structure |
|---|
Score = 68.7 bits (168), Expect = 9e-13
Identities = 31/190 (16%), Positives = 60/190 (31%), Gaps = 24/190 (12%)
Query: 252 TGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELSKLPFFW 311
TG E ++ +L V++ FGS + + ++A+ +
Sbjct: 214 TGAWLLSDERPLPPELEAFLAAGSP--PVHIGFGSSSGRGIADAAKVAVEA-IRAQGRRV 270
Query: 312 VLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVE 371
+L + G + + D A+ V + H +
Sbjct: 271 ILSR--GWTELVLPDDRDD---------CFAIDEVNFQALFRR--VAAVIHHGSAGTEHV 317
Query: 372 ALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLVEEKG 431
A + G+P +V+ DQ A + I T S++ +L VL E
Sbjct: 318 ATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPT----PTFESLSAALTTVLAPE-- 371
Query: 432 QIYRDKAKEM 441
R +A+ +
Sbjct: 372 --TRARAEAV 379
|
| >3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* Length = 412 | Back alignment and structure |
|---|
Score = 68.6 bits (168), Expect = 1e-12
Identities = 35/179 (19%), Positives = 69/179 (38%), Gaps = 31/179 (17%)
Query: 269 EWLDEQEKGS-VVYVAFGSEAKPSQEELTEI-----ALGLELSKLPFFWVLKKRLGQADT 322
WL ++ +VY+ G+ + + E L L ++ ++ +
Sbjct: 233 AWLSSRDTARPLVYLTLGTSSGGTVEVLRAAIDGLAGLDADV-------LVASGPSLDVS 285
Query: 323 EPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVL 382
E+P + SW PQ A+L H + + H G + + AL G+P +
Sbjct: 286 GLGEVPANVR-------LE--SWVPQAALLPHVDL--VVHHGGSGTTLGALGAGVPQLSF 334
Query: 383 TCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEM 441
D NA+ + + + + D + +SV+ + + +L EE YR A+ +
Sbjct: 335 PWAGDSFANAQAVAQAGAGDHLLPDN----ISPDSVSGAAKRLLAEES---YRAGARAV 386
|
| >2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} Length = 384 | Back alignment and structure |
|---|
Score = 67.9 bits (166), Expect = 1e-12
Identities = 31/175 (17%), Positives = 60/175 (34%), Gaps = 21/175 (12%)
Query: 269 EWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELSKLPFFWVLKKRLGQADTEPI-EL 327
W+ ++ V V GS + F L K L + D E I
Sbjct: 202 PWMYTRDTRQRVLVTSGSRVAKESYDRNF----------DFLRGLAKDLVRWDVELIVAA 251
Query: 328 PDGFEERTRGR-GVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYA 386
PD E R W P + + HAG S + L G+P +++ +
Sbjct: 252 PDTVAEALRAEVPQARVGWTPLDVVAPT--CDLLVHHAGGVSTLTGLSAGVPQLLIPKGS 309
Query: 387 DQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEM 441
A+ + + + E + ++A+S + + ++ Y +A+++
Sbjct: 310 VLEAPARRVADYGAAIALLPGE----DSTEAIADSCQELQAKDT---YARRAQDL 357
|
| >1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 Length = 415 | Back alignment and structure |
|---|
Score = 66.4 bits (162), Expect = 5e-12
Identities = 35/190 (18%), Positives = 58/190 (30%), Gaps = 26/190 (13%)
Query: 252 TGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELSKLPFFW 311
TG E + +LD VY+ FGS P + +A+ +
Sbjct: 215 TGAWILPDERPLSPELAAFLDAGPP--PVYLGFGSLGAP--ADAVRVAIDA-IRAHGRRV 269
Query: 312 VLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVE 371
+L + G AD + + V + H G +
Sbjct: 270 ILSR--GWADLVLPDDGAD---------CFAIGEVNHQVLFGR--VAAVIHHGGAGTTHV 316
Query: 372 ALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLVEEKG 431
A + G P I+L ADQ A + E + T +S++ +L L E
Sbjct: 317 AARAGAPQILLPQMADQPYYAGRVAELGVGVAHDGPI----PTFDSLSAALATALTPE-- 370
Query: 432 QIYRDKAKEM 441
+A +
Sbjct: 371 --THARATAV 378
|
| >4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* Length = 398 | Back alignment and structure |
|---|
Score = 64.7 bits (158), Expect = 2e-11
Identities = 29/176 (16%), Positives = 57/176 (32%), Gaps = 19/176 (10%)
Query: 269 EWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELSKLPFFWVLKKRLGQADTEPI--- 325
W+ E+ K + + FG+ L L + L + E +
Sbjct: 219 SWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLS-------LLQALSQELPKLGFEVVVAV 271
Query: 326 ELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCY 385
+ GV+ P AI+ V + H G + + L G+P + +
Sbjct: 272 SDKLAQTLQPLPEGVLAAGQFPLSAIMPACDV--VVHHGGHGTTLTCLSEGVPQVSVPVI 329
Query: 386 ADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEM 441
A+ +A+LL +P ++ SV + + + Y A+ +
Sbjct: 330 AEVWDSARLLHAAGAGVEVPWEQ----AGVESVLAACARIRDDSS---YVGNARRL 378
|
| >3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* Length = 398 | Back alignment and structure |
|---|
Score = 62.2 bits (151), Expect = 1e-10
Identities = 30/174 (17%), Positives = 57/174 (32%), Gaps = 23/174 (13%)
Query: 269 EWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELSKLPFFWVLKKRLGQADTEPI-EL 327
+ L V + G+ + + ++ +VL LG D P+ L
Sbjct: 224 DRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGEVDADFVLA--LGDLDISPLGTL 281
Query: 328 PDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYAD 387
P V W P +L + + H G +V+ A+ G+P ++ D
Sbjct: 282 PRN---------VRAVGWTPLHTLLRTCTA--VVHHGGGGTVMTAIDAGIPQLLAPDPRD 330
Query: 388 QGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEM 441
Q + + + A+ LR ++ +E R A+E+
Sbjct: 331 QFQHTAREAVSRRGIGLVSTSDK------VDADLLRRLIGDES---LRTAAREV 375
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 478 | |||
| 3hbf_A | 454 | Flavonoid 3-O-glucosyltransferase; glycosyltransfe | 100.0 | |
| 2vch_A | 480 | Hydroquinone glucosyltransferase; glycosyltransfer | 100.0 | |
| 2pq6_A | 482 | UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl | 100.0 | |
| 2c1x_A | 456 | UDP-glucose flavonoid 3-O glycosyltransferase; WIN | 100.0 | |
| 2acv_A | 463 | Triterpene UDP-glucosyl transferase UGT71G1; glyco | 100.0 | |
| 2iya_A | 424 | OLEI, oleandomycin glycosyltransferase; carbohydra | 100.0 | |
| 4amg_A | 400 | Snogd; transferase, polyketide biosynthesis, GT1 f | 100.0 | |
| 1iir_A | 415 | Glycosyltransferase GTFB; rossmann fold; 1.80A {Am | 100.0 | |
| 1rrv_A | 416 | Glycosyltransferase GTFD; GT-B, glycosyltransferas | 100.0 | |
| 3rsc_A | 415 | CALG2; TDP, enediyne, structural genomics, PSI-2, | 100.0 | |
| 3h4t_A | 404 | Glycosyltransferase GTFA, glycosyltransferase; van | 100.0 | |
| 3ia7_A | 402 | CALG4; glycosysltransferase, calicheamicin, enediy | 100.0 | |
| 2iyf_A | 430 | OLED, oleandomycin glycosyltransferase; antibiotic | 100.0 | |
| 2yjn_A | 441 | ERYCIII, glycosyltransferase; transferase, cytochr | 100.0 | |
| 2p6p_A | 384 | Glycosyl transferase; X-RAY-diffraction,urdamycina | 100.0 | |
| 4fzr_A | 398 | SSFS6; structural genomics, PSI-biology, protein s | 100.0 | |
| 3oti_A | 398 | CALG3; calicheamicin, TDP, structural genomics, PS | 100.0 | |
| 3tsa_A | 391 | SPNG, NDP-rhamnosyltransferase; glycosyltransferas | 100.0 | |
| 3otg_A | 412 | CALG1; calicheamicin, TDP, structural genomics, PS | 100.0 | |
| 3s2u_A | 365 | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape | 99.97 | |
| 2o6l_A | 170 | UDP-glucuronosyltransferase 2B7; drug metabolism, | 99.96 | |
| 1f0k_A | 364 | MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe | 99.9 | |
| 3hbm_A | 282 | UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter je | 99.73 | |
| 2jzc_A | 224 | UDP-N-acetylglucosamine transferase subunit ALG13; | 99.62 | |
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 99.56 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 99.55 | |
| 1v4v_A | 376 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t | 99.55 | |
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 99.51 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 99.49 | |
| 3fro_A | 439 | GLGA glycogen synthase; glycosyltransferase family | 99.48 | |
| 3dzc_A | 396 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.48 | |
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 99.45 | |
| 1vgv_A | 384 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.42 | |
| 3ot5_A | 403 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.39 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 99.37 | |
| 3beo_A | 375 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a | 99.32 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 99.25 | |
| 4hwg_A | 385 | UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc | 99.17 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 99.16 | |
| 1rzu_A | 485 | Glycogen synthase 1; glycosyl-transferase, GT-B fo | 99.15 | |
| 2qzs_A | 485 | Glycogen synthase; glycosyl-transferase, GT-B fold | 99.1 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 99.08 | |
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 98.99 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 98.74 | |
| 2hy7_A | 406 | Glucuronosyltransferase GUMK; glycosyltransferases | 98.73 | |
| 2f9f_A | 177 | First mannosyl transferase (WBAZ-1); alpha-beta pr | 98.61 | |
| 2xci_A | 374 | KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci | 98.51 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 98.38 | |
| 3vue_A | 536 | GBSS-I, granule-bound starch synthase 1, chloropla | 98.26 | |
| 3q3e_A | 631 | HMW1C-like glycosyltransferase; N-glycosylation; 2 | 98.1 | |
| 3tov_A | 349 | Glycosyl transferase family 9; structural genomics | 97.66 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 97.65 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 97.6 | |
| 2bfw_A | 200 | GLGA glycogen synthase; glycosyltransferase family | 97.47 | |
| 1psw_A | 348 | ADP-heptose LPS heptosyltransferase II; structural | 97.44 | |
| 3rhz_A | 339 | GTF3, nucleotide sugar synthetase-like protein; gl | 97.26 | |
| 2gt1_A | 326 | Lipopolysaccharide heptosyltransferase-1; GT-B fol | 96.61 | |
| 3ty2_A | 261 | 5'-nucleotidase SURE; surviVal protein, phosphatas | 93.46 | |
| 2phj_A | 251 | 5'-nucleotidase SURE; SURE protein, putative acid | 93.26 | |
| 3t5t_A | 496 | Putative glycosyltransferase; GTB fold, pseudoglyc | 91.16 | |
| 2wqk_A | 251 | 5'-nucleotidase SURE; SURE protein, putative acid | 90.67 | |
| 2iz6_A | 176 | Molybdenum cofactor carrier protein; metal transpo | 89.76 | |
| 1kjn_A | 157 | MTH0777; hypotethical protein, structural genomics | 89.31 | |
| 4b4k_A | 181 | N5-carboxyaminoimidazole ribonucleotide mutase; is | 87.77 | |
| 1l5x_A | 280 | SurviVal protein E; structural genomics, putative | 87.27 | |
| 3nb0_A | 725 | Glycogen [starch] synthase isoform 2; glycogen syn | 87.24 | |
| 1xmp_A | 170 | PURE, phosphoribosylaminoimidazole carboxylase; pu | 86.71 | |
| 1uqt_A | 482 | Alpha, alpha-trehalose-phosphate synthase; glycosy | 86.67 | |
| 4grd_A | 173 | N5-CAIR mutase, phosphoribosylaminoimidazole carbo | 86.54 | |
| 1j9j_A | 247 | Stationary phase surviVal protein; SURE protein, u | 86.45 | |
| 3rg8_A | 159 | Phosphoribosylaminoimidazole carboxylase, PURE PR; | 85.22 | |
| 3oow_A | 166 | Phosphoribosylaminoimidazole carboxylase,catalyic; | 85.19 | |
| 1g5t_A | 196 | COB(I)alamin adenosyltransferase; P-loop protein, | 84.62 | |
| 2e6c_A | 244 | 5'-nucleotidase SURE; SURE protein, cowith mangane | 84.08 | |
| 1o4v_A | 183 | Phosphoribosylaminoimidazole mutase PURE; structur | 83.82 | |
| 3rfo_A | 317 | Methionyl-tRNA formyltransferase; structural genom | 83.56 | |
| 3ors_A | 163 | N5-carboxyaminoimidazole ribonucleotide mutase; is | 83.39 | |
| 3kuu_A | 174 | Phosphoribosylaminoimidazole carboxylase catalyti | 82.29 | |
| 3lp6_A | 174 | Phosphoribosylaminoimidazole carboxylase catalyti; | 82.05 | |
| 1fmt_A | 314 | Methionyl-tRNA FMet formyltransferase; initiator t | 81.66 | |
| 2v4n_A | 254 | Multifunctional protein SUR E; hydrolase, surviVal | 81.54 | |
| 1mvl_A | 209 | PPC decarboxylase athal3A; flavoprotein, active si | 81.17 |
| >3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-65 Score=506.43 Aligned_cols=437 Identities=25% Similarity=0.329 Sum_probs=329.9
Q ss_pred CCCCCccEEEEecCCCccCHHHHHHHHHHHHhCC--CeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCCCCCCCCcc
Q 011765 1 MADNSKLQIAMFPWLAFGHMIPWLELAKLIAQKG--HKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVDNLRENAE 78 (478)
Q Consensus 1 ~~~~~~~~il~~~~~~~gH~~p~l~La~~L~~rG--h~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~ 78 (478)
|++++++||+++|+|++||++|++.||+.|+++| +.|||++++.+...+........++++|+.+| ++++.+..
T Consensus 8 M~~~~~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~~~~~~~i~~~~ip----dglp~~~~ 83 (454)
T 3hbf_A 8 MNGNNLLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSNEFLPNIKYYNVH----DGLPKGYV 83 (454)
T ss_dssp ----CCCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSSSCCCTTEEEEECC----CCCCTTCC
T ss_pred ccCCCCCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhcccccCCCCceEEecC----CCCCCCcc
Confidence 7777789999999999999999999999999999 99999999866555433221113569999998 77877655
Q ss_pred ccCCCChhHHHHHHHHHhhhhHHHHHHHhh--cCCCEEEEcCCcccHHHHHHHhCCCeEEEecchHHHHHhhcccccccc
Q 011765 79 ATIDLPYDEVKYLKQSFDCLEEPMAKLLQS--LAPDWLLFDFAAYWLPARARELGIPSGFFSIFTAATLGYFGPSSVLIN 156 (478)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~--~~pD~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~~ 156 (478)
...+.......++......+.+.+.+++++ .++||||+|.+++|+..+|+++|||++.+|+++++.+..+.+...+.+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~ 163 (454)
T 3hbf_A 84 SSGNPREPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIRE 163 (454)
T ss_dssp CCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHHH
T ss_pred ccCChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHHh
Confidence 444322222333444434466666666554 368999999999999999999999999999999999887776543322
Q ss_pred ccCCCCCCCCcccCCCcccccccccccchhhhhhhhhhhcCCcccchhhhhhhccccCCcEEEEcCcCccChHHHHHHHh
Q 011765 157 DSGDHLKTPEDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQ 236 (478)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~~~ 236 (478)
....... ....+..++|+.. .++...++.+... ...........+..+...+++++++||+++||++.++.+++
T Consensus 164 ~~~~~~~---~~~~~~~~iPg~p--~~~~~dlp~~~~~-~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~ 237 (454)
T 3hbf_A 164 KTGSKEV---HDVKSIDVLPGFP--ELKASDLPEGVIK-DIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNS 237 (454)
T ss_dssp TCCHHHH---TTSSCBCCSTTSC--CBCGGGSCTTSSS-CTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHT
T ss_pred hcCCCcc---ccccccccCCCCC--CcChhhCchhhcc-CCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHHh
Confidence 2000000 0011122344321 1222222222211 11111234455566667789999999999999999998887
Q ss_pred hcCCCeeeeccCCCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccCCCHHHHHHHHHHHHhCCCCEEEEEecC
Q 011765 237 LHRKPVIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELSKLPFFWVLKKR 316 (478)
Q Consensus 237 ~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~ 316 (478)
.+ +++++|||+....... ....++++.+||+..+++++|||||||....+.+++.+++.+|+.++++|||+++..
T Consensus 238 ~~-~~v~~vGPl~~~~~~~----~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~~~~ 312 (454)
T 3hbf_A 238 KF-KLLLNVGPFNLTTPQR----KVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFRGD 312 (454)
T ss_dssp TS-SCEEECCCHHHHSCCS----CCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEECCSC
T ss_pred cC-CCEEEECCcccccccc----cccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCc
Confidence 76 5799999998543211 023356799999999889999999999998889999999999999999999999753
Q ss_pred CCCCCCCCCCCChhhhhhcCCCcEEEeccCChhhhhcCCCceeeeeccChhhHHHHHHhCCcEeccccccchhhHHHHHh
Q 011765 317 LGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQGLNAKLLE 396 (478)
Q Consensus 317 ~~~~~~~~~~~p~~~~~~~~~~n~~~~~~vpq~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~ 396 (478)
....+|+++.++.. +|+++++|+||.++|+|+++++|||||||||++||+++|||+|++|++.||+.||++++
T Consensus 313 ------~~~~lp~~~~~~~~-~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~ 385 (454)
T 3hbf_A 313 ------PKEKLPKGFLERTK-TKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTE 385 (454)
T ss_dssp ------HHHHSCTTHHHHTT-TTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHH
T ss_pred ------chhcCCHhHHhhcC-CceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHHHHHHH
Confidence 23457888876654 57777799999999999999999999999999999999999999999999999999999
Q ss_pred hc-CeEEEeeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhc----ccCChHHHHHHHHHHHH
Q 011765 397 EK-QIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFG----DKGRHDRYVDNFLNYLK 463 (478)
Q Consensus 397 ~~-g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~----~~~~~~~~~~~i~~~~~ 463 (478)
+. |+|+.++... +++++|+++|+++|++++.++||+||+++++.++ ++|++.++++.+++.+.
T Consensus 386 ~~~g~Gv~l~~~~----~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~i~ 453 (454)
T 3hbf_A 386 SVLEIGVGVDNGV----LTKESIKKALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVT 453 (454)
T ss_dssp TTSCSEEECGGGS----CCHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHT
T ss_pred HhhCeeEEecCCC----CCHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHh
Confidence 95 9999998776 9999999999999994334489999999999975 56677899999998763
|
| >2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-60 Score=477.02 Aligned_cols=444 Identities=28% Similarity=0.383 Sum_probs=312.4
Q ss_pred CCCCCccEEEEecCCCccCHHHHHHHHHHHHhC-CCeEEEEeCCCc--cccCCCCCCCCCCCeEEEEecCCCCCCCCCCc
Q 011765 1 MADNSKLQIAMFPWLAFGHMIPWLELAKLIAQK-GHKIFFISTPRN--IDRLPRLPQNLASMIQFVKISLPHVDNLRENA 77 (478)
Q Consensus 1 ~~~~~~~~il~~~~~~~gH~~p~l~La~~L~~r-Gh~Vt~~~~~~~--~~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~ 77 (478)
|+.++++||+++|+|++||++|++.||++|++| ||+|||++++.. ...+.........+++|+.+|... ++..
T Consensus 1 M~~~~~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~---~~~~- 76 (480)
T 2vch_A 1 MEESKTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLDSLPSSISSVFLPPVD---LTDL- 76 (480)
T ss_dssp -----CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC-CCTTEEEEECCCCC---CTTS-
T ss_pred CCCCCCcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhccccCCCceEEEcCCCC---CCCC-
Confidence 888888999999999999999999999999998 999999999873 333332100001459999998421 1111
Q ss_pred cccCCCChhHHHHHHHHHhhhhHHHHHHHhh----cCC-CEEEEcCCcccHHHHHHHhCCCeEEEecchHHHHHhhcccc
Q 011765 78 EATIDLPYDEVKYLKQSFDCLEEPMAKLLQS----LAP-DWLLFDFAAYWLPARARELGIPSGFFSIFTAATLGYFGPSS 152 (478)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~----~~p-D~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~ 152 (478)
. . .......+......+.+.+.+++++ .++ |+||+|.+..|+..+|+++|||++.++++++.....+.+..
T Consensus 77 ~---~-~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~ 152 (480)
T 2vch_A 77 S---S-STRIESRISLTVTRSNPELRKVFDSFVEGGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLP 152 (480)
T ss_dssp C---T-TCCHHHHHHHHHHTTHHHHHHHHHHHHHTTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHH
T ss_pred C---C-chhHHHHHHHHHHhhhHHHHHHHHHhccCCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHH
Confidence 1 1 1122233334445566677777766 378 99999999999999999999999999999987666544322
Q ss_pred ccccccCCCCCCCCcccCCCcccccccccccchhhhhhhhhhhcCCcccchhhhhhhccccCCcEEEEcCcCccChHHHH
Q 011765 153 VLINDSGDHLKTPEDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLK 232 (478)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~ 232 (478)
.+.+....+..........+.+.|.. ...+.... .......+.........+++++++++|++.++|++...
T Consensus 153 ~~~~~~~~~~~~~~~~~~~Pg~~p~~------~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~ 224 (480)
T 2vch_A 153 KLDETVSCEFRELTEPLMLPGCVPVA------GKDFLDPA--QDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIK 224 (480)
T ss_dssp HHHHHCCSCGGGCSSCBCCTTCCCBC------GGGSCGGG--SCTTSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHH
T ss_pred HHHhcCCCcccccCCcccCCCCCCCC------hHHCchhh--hcCCchHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHH
Confidence 11111000000000001111111111 11111100 01111122222233344556788999999999998777
Q ss_pred HHHhhc--CCCeeeeccCCCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccCCCHHHHHHHHHHHHhCCCCEE
Q 011765 233 LLEQLH--RKPVIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELSKLPFF 310 (478)
Q Consensus 233 ~~~~~~--~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i 310 (478)
.+.+.. .+++++|||+........ ....++++.+||+..+++++|||||||....+.+++.+++++|+.++++||
T Consensus 225 ~l~~~~~~~~~v~~vGpl~~~~~~~~---~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~l 301 (480)
T 2vch_A 225 ALQEPGLDKPPVYPVGPLVNIGKQEA---KQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFL 301 (480)
T ss_dssp HHHSCCTTCCCEEECCCCCCCSCSCC--------CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHhcccCCCcEEEEecccccccccc---CccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCCcEE
Confidence 765421 257999999986432100 022456799999998888999999999998888999999999999999999
Q ss_pred EEEecCCCCC---------CCC-CCCCChhhhhhcCCCcEEEeccCChhhhhcCCCceeeeeccChhhHHHHHHhCCcEe
Q 011765 311 WVLKKRLGQA---------DTE-PIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLI 380 (478)
Q Consensus 311 ~~~~~~~~~~---------~~~-~~~~p~~~~~~~~~~n~~~~~~vpq~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l 380 (478)
|+++...... +.. ...+|+++.++.+..++++.+|+||.+||+|+++++|||||||||++||+++|||||
T Consensus 302 w~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i 381 (480)
T 2vch_A 302 WVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLI 381 (480)
T ss_dssp EEECCCCSSTTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEE
T ss_pred EEECCccccccccccccccccchhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCEE
Confidence 9998643100 001 135899998888888888877999999999999999999999999999999999999
Q ss_pred ccccccchhhHHHHH-hhcCeEEEeeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhcc---cCC-hHHHH
Q 011765 381 VLTCYADQGLNAKLL-EEKQIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFGD---KGR-HDRYV 455 (478)
Q Consensus 381 ~~P~~~DQ~~na~~v-~~~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~---~~~-~~~~~ 455 (478)
++|++.||+.||+++ +++|+|+.++..+ ++.+++++|+++|+++|+++++++||+||+++++.+++ .+| +.+++
T Consensus 382 ~~P~~~DQ~~na~~l~~~~G~g~~l~~~~-~~~~~~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~~ 460 (480)
T 2vch_A 382 AWPLYAEQKMNAVLLSEDIRAALRPRAGD-DGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKAL 460 (480)
T ss_dssp ECCCSTTHHHHHHHHHHTTCCEECCCCCT-TSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTSHHHHHH
T ss_pred eccccccchHHHHHHHHHhCeEEEeeccc-CCccCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhcCCCHHHHH
Confidence 999999999999997 7899999997651 22389999999999999877678999999999999875 555 47889
Q ss_pred HHHHHHHHh
Q 011765 456 DNFLNYLKN 464 (478)
Q Consensus 456 ~~i~~~~~~ 464 (478)
+.|++.+++
T Consensus 461 ~~~v~~~~~ 469 (480)
T 2vch_A 461 SLVALKWKA 469 (480)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998865
|
| >2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10 | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-59 Score=478.38 Aligned_cols=448 Identities=23% Similarity=0.368 Sum_probs=310.0
Q ss_pred CCC--CCccEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCC--C--CCCeEEEEecCCCCCCCC
Q 011765 1 MAD--NSKLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQN--L--ASMIQFVKISLPHVDNLR 74 (478)
Q Consensus 1 ~~~--~~~~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~--~--~~~i~~~~i~~~~~~~l~ 74 (478)
|+. .+++||+++|+|++||++|++.||++|++|||+|||++++.+...+.+.... . .++++|+.+| ++++
T Consensus 1 ~~~~~~~~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~----~~lp 76 (482)
T 2pq6_A 1 MGNFANRKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIP----DGLT 76 (482)
T ss_dssp -------CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEEC----CCCC
T ss_pred CCcccCCCCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCCceEEEECC----CCCC
Confidence 555 3468999999999999999999999999999999999999876654432100 0 1359999998 4555
Q ss_pred CCccccCCCChhHHHHHHHHHhhhhHHHHHHHhh-------cCCCEEEEcCCcccHHHHHHHhCCCeEEEecchHHHHHh
Q 011765 75 ENAEATIDLPYDEVKYLKQSFDCLEEPMAKLLQS-------LAPDWLLFDFAAYWLPARARELGIPSGFFSIFTAATLGY 147 (478)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~-------~~pD~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~~~~~~ 147 (478)
...... +.......++......+.+.+.+++++ .+|||||+|.+++|+..+|+++|||++.++++++.....
T Consensus 77 ~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~ 155 (482)
T 2pq6_A 77 PMEGDG-DVSQDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLN 155 (482)
T ss_dssp ----------CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHH
T ss_pred Cccccc-CcchhHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHH
Confidence 411000 111122233333334455666666653 479999999999999999999999999999999877665
Q ss_pred hccccccccccCCCCCCCC----c-ccCCCcccccccccccchhhhhhhhhhhcCCcccchhhhhhhccccCCcEEEEcC
Q 011765 148 FGPSSVLINDSGDHLKTPE----D-YTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRS 222 (478)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns 222 (478)
+.+.......++.|..... . ......++|... .++...+..+..................+...+++++++|+
T Consensus 156 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~nt 233 (482)
T 2pq6_A 156 VMHFRSFVERGIIPFKDESYLTNGCLETKVDWIPGLK--NFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNT 233 (482)
T ss_dssp HTTHHHHHHTTCSSCSSGGGGTSSGGGCBCCSSTTCC--SCBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESS
T ss_pred HHHHHHHHhcCCCCCccccccccccccCccccCCCCC--CCchHHCchhhccCCcccHHHHHHHHHHHhhccCCEEEEcC
Confidence 4432211111122211000 0 001111222110 01111111111000001111122334455667889999999
Q ss_pred cCccChHHHHHHHhhcCCCeeeeccCCCC-CCCCC-----C--CCCCCChhhHhhhcccCCCCceEEEEeCcccCCCHHH
Q 011765 223 CMEFEPEWLKLLEQLHRKPVIPVGQLPTT-TGDGD-----S--DAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEE 294 (478)
Q Consensus 223 ~~~le~~~~~~~~~~~~~~~~~vGp~~~~-~~~~~-----~--~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~ 294 (478)
+++||++.++.+++.+ +++++|||+... ..... . ..-.+.+.++.+||+..+++++|||||||....+.++
T Consensus 234 ~~~le~~~~~~~~~~~-~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~ 312 (482)
T 2pq6_A 234 FNELESDVINALSSTI-PSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPEQ 312 (482)
T ss_dssp CGGGGHHHHHHHHTTC-TTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCCHHH
T ss_pred hHHHhHHHHHHHHHhC-CcEEEEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCCcccCCHHH
Confidence 9999999999888877 689999999752 11100 0 0001234568999999888899999999998878888
Q ss_pred HHHHHHHHHhCCCCEEEEEecCCCCCCCCCCCCChhhhhhcCCCcEEEeccCChhhhhcCCCceeeeeccChhhHHHHHH
Q 011765 295 LTEIALGLELSKLPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQ 374 (478)
Q Consensus 295 ~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~n~~~~~~vpq~~vL~~~~~~~~ItHgG~~s~~eal~ 374 (478)
+.+++++|+.++++|+|+++..... .....+|+++.++. .+|+++++|+||.++|+|+++++|||||||||++||++
T Consensus 313 ~~~~~~~l~~~~~~~l~~~~~~~~~--~~~~~l~~~~~~~~-~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~Eal~ 389 (482)
T 2pq6_A 313 LLEFAWGLANCKKSFLWIIRPDLVI--GGSVIFSSEFTNEI-ADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESIC 389 (482)
T ss_dssp HHHHHHHHHHTTCEEEEECCGGGST--TTGGGSCHHHHHHH-TTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHH
T ss_pred HHHHHHHHHhcCCcEEEEEcCCccc--cccccCcHhHHHhc-CCCEEEEeecCHHHHhcCCCCCEEEecCCcchHHHHHH
Confidence 9999999999999999999753210 01123788777665 45888889999999999999999999999999999999
Q ss_pred hCCcEeccccccchhhHHHHHh-hcCeEEEeeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhcc----cC
Q 011765 375 FGMPLIVLTCYADQGLNAKLLE-EKQIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFGD----KG 449 (478)
Q Consensus 375 ~GvP~l~~P~~~DQ~~na~~v~-~~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~----~~ 449 (478)
+|||+|++|++.||+.||++++ ++|+|+.++ .+ +++++|+++|+++|++++.++||+||+++++.+++ +|
T Consensus 390 ~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~-~~----~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gG 464 (482)
T 2pq6_A 390 AGVPMLCWPFFADQPTDCRFICNEWEIGMEID-TN----VKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGG 464 (482)
T ss_dssp HTCCEEECCCSTTHHHHHHHHHHTSCCEEECC-SS----CCHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHTSTTC
T ss_pred cCCCEEecCcccchHHHHHHHHHHhCEEEEEC-CC----CCHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999997 789999998 55 89999999999999932222799999999999874 46
Q ss_pred ChHHHHHHHHHHHHh
Q 011765 450 RHDRYVDNFLNYLKN 464 (478)
Q Consensus 450 ~~~~~~~~i~~~~~~ 464 (478)
++.++++.|++.+.+
T Consensus 465 ss~~~l~~~v~~~~~ 479 (482)
T 2pq6_A 465 CSYMNLNKVIKDVLL 479 (482)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred cHHHHHHHHHHHHHh
Confidence 678999999998743
|
| >2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-57 Score=454.66 Aligned_cols=439 Identities=22% Similarity=0.349 Sum_probs=303.9
Q ss_pred CCC-CCccEEEEecCCCccCHHHHHHHHHHHHhCCC--eEEEEeCCCccccCCCCCC-CCCCCeEEEEecCCCCCCCCCC
Q 011765 1 MAD-NSKLQIAMFPWLAFGHMIPWLELAKLIAQKGH--KIFFISTPRNIDRLPRLPQ-NLASMIQFVKISLPHVDNLREN 76 (478)
Q Consensus 1 ~~~-~~~~~il~~~~~~~gH~~p~l~La~~L~~rGh--~Vt~~~~~~~~~~~~~~g~-~~~~~i~~~~i~~~~~~~l~~~ 76 (478)
|.. .+++||+++|+|++||++|++.||+.|++||| .|||++++.....+..... ...++++|+.++ ++++.+
T Consensus 1 m~~~~~~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~~~~~~~i~~~~i~----~glp~~ 76 (456)
T 2c1x_A 1 MSQTTTNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMHTMQCNIKSYDIS----DGVPEG 76 (456)
T ss_dssp ------CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC-------CTTEEEEECC----CCCCTT
T ss_pred CCCCCCCCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhccccccCCCceEEEeCC----CCCCCc
Confidence 554 34689999999999999999999999999965 4688888654333222110 001459999987 556554
Q ss_pred ccccCCCChhHHHHHHHHH-hhhhHHHHHHHhh--cCCCEEEEcCCcccHHHHHHHhCCCeEEEecchHHHHHhhccccc
Q 011765 77 AEATIDLPYDEVKYLKQSF-DCLEEPMAKLLQS--LAPDWLLFDFAAYWLPARARELGIPSGFFSIFTAATLGYFGPSSV 153 (478)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~-~~~~~~l~~ll~~--~~pD~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~ 153 (478)
.... .........+.... ..+.+.+.+++++ .+||+||+|.++.|+..+|+++|||+|.++++++..+..+.+...
T Consensus 77 ~~~~-~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~ 155 (456)
T 2c1x_A 77 YVFA-GRPQEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDE 155 (456)
T ss_dssp CCCC-CCTTHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHH
T ss_pred cccc-CChHHHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHH
Confidence 3211 12223333333222 2244444444433 589999999999999999999999999999998876654433221
Q ss_pred cccccCCCCCCCCcccCCCcccccccccccchhhhhhhhhhhcCCcccc-hhhhhhhccccCCcEEEEcCcCccChHHHH
Q 011765 154 LINDSGDHLKTPEDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNV-SHGYRFGQSLKGCDIVAVRSCMEFEPEWLK 232 (478)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~ns~~~le~~~~~ 232 (478)
+......+.. .........++|.... ++...+..... .......+ ....+..+...+++++++|++++||++.++
T Consensus 156 ~~~~~~~~~~-~~~~~~~~~~~pg~~~--~~~~~lp~~~~-~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~ 231 (456)
T 2c1x_A 156 IREKIGVSGI-QGREDELLNFIPGMSK--VRFRDLQEGIV-FGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTN 231 (456)
T ss_dssp HHHHHCSSCC-TTCTTCBCTTSTTCTT--CBGGGSCTTTS-SSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHH
T ss_pred HHhccCCccc-ccccccccccCCCCCc--ccHHhCchhhc-CCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHHHHH
Confidence 1111011100 0000111112232111 11111111000 00001111 222333344567899999999999999888
Q ss_pred HHHhhcCCCeeeeccCCCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccCCCHHHHHHHHHHHHhCCCCEEEE
Q 011765 233 LLEQLHRKPVIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELSKLPFFWV 312 (478)
Q Consensus 233 ~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~ 312 (478)
.+++.+ +++++|||+....... ....+.++.+||+..+++++|||||||....+.+++.+++++|+.++.+|+|+
T Consensus 232 ~~~~~~-~~~~~vGpl~~~~~~~----~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~ 306 (456)
T 2c1x_A 232 DLKSKL-KTYLNIGPFNLITPPP----VVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWS 306 (456)
T ss_dssp HHHHHS-SCEEECCCHHHHC-------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHhcC-CCEEEecCcccCcccc----cccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcCCeEEEE
Confidence 888877 5799999997543210 01223568999999888899999999999878889999999999999999999
Q ss_pred EecCCCCCCCCCCCCChhhhhhcCCCcEEEeccCChhhhhcCCCceeeeeccChhhHHHHHHhCCcEeccccccchhhHH
Q 011765 313 LKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQGLNA 392 (478)
Q Consensus 313 ~~~~~~~~~~~~~~~p~~~~~~~~~~n~~~~~~vpq~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na 392 (478)
++.. ....+|+++.++. .+|+++.+|+||.++|+|+++++|||||||||++||+++|||+|++|++.||+.||
T Consensus 307 ~~~~------~~~~l~~~~~~~~-~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na 379 (456)
T 2c1x_A 307 LRDK------ARVHLPEGFLEKT-RGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNG 379 (456)
T ss_dssp CCGG------GGGGSCTTHHHHH-TTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHH
T ss_pred ECCc------chhhCCHHHHhhc-CCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChhhHHHHH
Confidence 9754 2345777776554 35788889999999999999999999999999999999999999999999999999
Q ss_pred HHHhhc-CeEEEeeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhc----ccCChHHHHHHHHHHHHh
Q 011765 393 KLLEEK-QIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFG----DKGRHDRYVDNFLNYLKN 464 (478)
Q Consensus 393 ~~v~~~-g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~----~~~~~~~~~~~i~~~~~~ 464 (478)
+++++. |+|+.++... +++++|+++|+++|++++.++||+||+++++.++ ++|++.++++.|++.+.+
T Consensus 380 ~~l~~~~g~g~~l~~~~----~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~~~~ 452 (456)
T 2c1x_A 380 RMVEDVLEIGVRIEGGV----FTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVSK 452 (456)
T ss_dssp HHHHHTSCCEEECGGGS----CCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHTS
T ss_pred HHHHHHhCeEEEecCCC----cCHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHHh
Confidence 999999 9999998776 8999999999999993222489999999999986 456678999999998853
|
| >2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-56 Score=448.54 Aligned_cols=432 Identities=21% Similarity=0.313 Sum_probs=304.9
Q ss_pred CccEEEEecCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCCcccc-----CCCCCCCCCCCeEEEEecCCCCCCCCCCc
Q 011765 5 SKLQIAMFPWLAFGHMIPWLELAKLIAQK--GHKIFFISTPRNIDR-----LPRLPQNLASMIQFVKISLPHVDNLRENA 77 (478)
Q Consensus 5 ~~~~il~~~~~~~gH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~-----~~~~g~~~~~~i~~~~i~~~~~~~l~~~~ 77 (478)
+++||+++|+|++||++|++.||+.|++| ||+|||++++.+.+. +.... ...++++|+.+|.. .++..
T Consensus 8 ~~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~-~~~~~i~~~~lp~~---~~~~~- 82 (463)
T 2acv_A 8 KNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVL-ASQPQIQLIDLPEV---EPPPQ- 82 (463)
T ss_dssp HCEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHH-CSCTTEEEEECCCC---CCCCG-
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhcc-cCCCCceEEECCCC---CCCcc-
Confidence 46899999999999999999999999999 999999999876321 11100 01135999999832 13221
Q ss_pred cccCCCChhHHHHHHHHHhhhhHHHHHHHhh---cCCCEEEEcCCcccHHHHHHHhCCCeEEEecchHHHHHhhcccccc
Q 011765 78 EATIDLPYDEVKYLKQSFDCLEEPMAKLLQS---LAPDWLLFDFAAYWLPARARELGIPSGFFSIFTAATLGYFGPSSVL 154 (478)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~---~~pD~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~ 154 (478)
..... .... +........+.+.+++++ .+||+||+|.++.|+..+|+++|||++.++++++..+..+.+...+
T Consensus 83 ~~~~~--~~~~--~~~~~~~~~~~~~~ll~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~ 158 (463)
T 2acv_A 83 ELLKS--PEFY--ILTFLESLIPHVKATIKTILSNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNR 158 (463)
T ss_dssp GGGGS--HHHH--HHHHHHHTHHHHHHHHHHHCCTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGS
T ss_pred cccCC--ccHH--HHHHHHhhhHHHHHHHHhccCCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhh
Confidence 10111 1111 334445556677788776 6899999999999999999999999999999988877655433211
Q ss_pred ccccCCCCCCCCcccCCCcccccccccccchhhhhhhhhhhcCCcccchhhhhhhccccCCcEEEEcCcCccChHHHHHH
Q 011765 155 INDSGDHLKTPEDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLL 234 (478)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~ 234 (478)
... . +............+|... ..+....+.... ... ...+.........+++++++++|++++||++..+.+
T Consensus 159 ~~~--~-~~~~~~~~~~~~~~pg~~-~~~~~~~l~~~~--~~~-~~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~~l 231 (463)
T 2acv_A 159 QIE--E-VFDDSDRDHQLLNIPGIS-NQVPSNVLPDAC--FNK-DGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDAL 231 (463)
T ss_dssp CTT--C-CCCCSSGGGCEECCTTCS-SCEEGGGSCHHH--HCT-TTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHH
T ss_pred ccc--C-CCCCccccCceeECCCCC-CCCChHHCchhh--cCC-chHHHHHHHHHHhcccCCEEEECCHHHHhHHHHHHH
Confidence 100 0 000000000001112110 001111111110 011 112222223334456788899999999999887777
Q ss_pred Hhhc--CCCeeeeccCCCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCccc-CCCHHHHHHHHHHHHhCCCCEEE
Q 011765 235 EQLH--RKPVIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEA-KPSQEELTEIALGLELSKLPFFW 311 (478)
Q Consensus 235 ~~~~--~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~-~~~~~~~~~~~~al~~~~~~~i~ 311 (478)
.+.. ++++++|||+...............++++.+||+..+++++|||||||.. ..+.+++.+++++|+..+++|||
T Consensus 232 ~~~~~p~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l~ 311 (463)
T 2acv_A 232 YDHDEKIPPIYAVGPLLDLKGQPNPKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLW 311 (463)
T ss_dssp HHHCTTSCCEEECCCCCCSSCCCBTTBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred HhccccCCcEEEeCCCcccccccccccccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCCCcEEE
Confidence 6655 67899999998643200000001235689999999888899999999999 77888899999999999999999
Q ss_pred EEecCCCCCCCCCCCCChhhhhhcC-CCcEEEeccCChhhhhcCCCceeeeeccChhhHHHHHHhCCcEeccccccchhh
Q 011765 312 VLKKRLGQADTEPIELPDGFEERTR-GRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQGL 390 (478)
Q Consensus 312 ~~~~~~~~~~~~~~~~p~~~~~~~~-~~n~~~~~~vpq~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~ 390 (478)
+++.+ ...+|+++.++.. .+++++++|+||.++|+|+++++|||||||||++||+++|||+|++|++.||+.
T Consensus 312 ~~~~~-------~~~l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~~dQ~~ 384 (463)
T 2acv_A 312 SNSAE-------KKVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQL 384 (463)
T ss_dssp ECCCC-------GGGSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTHHH
T ss_pred EECCC-------cccCChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccchhhhHH
Confidence 98742 1246777665541 247778889999999999999999999999999999999999999999999999
Q ss_pred HHHHH-hhcCeEEEe-e---ccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhcc----cCChHHHHHHHHHH
Q 011765 391 NAKLL-EEKQIVELI-P---RDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFGD----KGRHDRYVDNFLNY 461 (478)
Q Consensus 391 na~~v-~~~g~G~~l-~---~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~----~~~~~~~~~~i~~~ 461 (478)
||+++ +++|+|+.+ + .. ++.+++++|+++|+++|++ +++||+||+++++.+++ +|++.++++.|++.
T Consensus 385 Na~~lv~~~g~g~~l~~~~~~~--~~~~~~~~l~~ai~~ll~~--~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~ 460 (463)
T 2acv_A 385 NAFRLVKEWGVGLGLRVDYRKG--SDVVAAEEIEKGLKDLMDK--DSIVHKKVQEMKEMSRNAVVDGGSSLISVGKLIDD 460 (463)
T ss_dssp HHHHHHHTSCCEEESCSSCCTT--CCCCCHHHHHHHHHHHTCT--TCTHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHH
T ss_pred HHHHHHHHcCeEEEEecccCCC--CccccHHHHHHHHHHHHhc--cHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHH
Confidence 99995 899999999 3 22 0028999999999999962 47899999999998764 56678999999987
Q ss_pred HH
Q 011765 462 LK 463 (478)
Q Consensus 462 ~~ 463 (478)
++
T Consensus 461 ~~ 462 (463)
T 2acv_A 461 IT 462 (463)
T ss_dssp HH
T ss_pred hc
Confidence 73
|
| >2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-48 Score=386.07 Aligned_cols=403 Identities=18% Similarity=0.194 Sum_probs=282.4
Q ss_pred ccEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCCCCCCCCccc---cCC
Q 011765 6 KLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVDNLRENAEA---TID 82 (478)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~---~~~ 82 (478)
+|||+|+++++.||++|++.||++|+++||+|+|++++.+.+.+...| ++|++++ ..++..... ...
T Consensus 12 ~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~~g------~~~~~~~----~~~~~~~~~~~~~~~ 81 (424)
T 2iya_A 12 PRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKAAG------ATPVVYD----SILPKESNPEESWPE 81 (424)
T ss_dssp CCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHT------CEEEECC----CCSCCTTCTTCCCCS
T ss_pred cceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHhCC------CEEEecC----ccccccccchhhcch
Confidence 579999999999999999999999999999999999999887777767 8998887 333222111 011
Q ss_pred CChhHHHHHHHHHhhhhHHHHHHHhhcCCCEEEEcCCcccHHHHHHHhCCCeEEEecchHHHHHhhccccccccccCC--
Q 011765 83 LPYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAAYWLPARARELGIPSGFFSIFTAATLGYFGPSSVLINDSGD-- 160 (478)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~~~~~~-- 160 (478)
.....+..+......+.+.+.+++++.+||+||+|.+..++..+|+.+|||++.+++.+.........+.. ...+..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~-~~~~~~~~ 160 (424)
T 2iya_A 82 DQESAMGLFLDEAVRVLPQLEDAYADDRPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGFEEDVPA-VQDPTADR 160 (424)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHTTTSCCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTHHHHSGG-GSCCCC--
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEcCcccHHHHHHHhcCCCEEEEeccccccccccccccc-cccccccc
Confidence 11122233333444556678888888999999999988889999999999999998766421111000000 000000
Q ss_pred --CCCCCCcccCCCcccccccccccchhhhhhhhhhhcCCcccchhhhhhhccccCCcEEEEcCcCccChHHHHHHHhhc
Q 011765 161 --HLKTPEDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLH 238 (478)
Q Consensus 161 --~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~~~~~ 238 (478)
+................ ...... ....+...+... ++. .........++.+++++.++++++ ...+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~--g~~--~~~~~~~~~~~~~l~~~~~~l~~~-----~~~~ 228 (424)
T 2iya_A 161 GEEAAAPAGTGDAEEGAEA--EDGLVR-FFTRLSAFLEEH--GVD--TPATEFLIAPNRCIVALPRTFQIK-----GDTV 228 (424)
T ss_dssp ---------------------HHHHHH-HHHHHHHHHHHT--TCC--SCHHHHHHCCSSEEESSCTTTSTT-----GGGC
T ss_pred ccccccccccccchhhhcc--chhHHH-HHHHHHHHHHHc--CCC--CCHHHhccCCCcEEEEcchhhCCC-----ccCC
Confidence 00000000000000000 000000 001111111111 111 011112225678899999999875 2567
Q ss_pred CCCeeeeccCCCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccCCCHHHHHHHHHHHHhCCCCEEEEEecCCC
Q 011765 239 RKPVIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELSKLPFFWVLKKRLG 318 (478)
Q Consensus 239 ~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~ 318 (478)
++++++|||+..... +..+|++..+++++|||++||......+.+..++++++..+.+++|+++....
T Consensus 229 ~~~~~~vGp~~~~~~------------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~ 296 (424)
T 2iya_A 229 GDNYTFVGPTYGDRS------------HQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDWHVVLSVGRFVD 296 (424)
T ss_dssp CTTEEECCCCCCCCG------------GGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCSSEEEEECCTTSC
T ss_pred CCCEEEeCCCCCCcc------------cCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCCcEEEEEECCcCC
Confidence 889999999764211 12357776666789999999998656788889999998888899888764321
Q ss_pred CCCCCCCCCChhhhhhcCCCcEEEeccCChhhhhcCCCceeeeeccChhhHHHHHHhCCcEeccccccchhhHHHHHhhc
Q 011765 319 QADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEK 398 (478)
Q Consensus 319 ~~~~~~~~~p~~~~~~~~~~n~~~~~~vpq~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~ 398 (478)
. +....+| +|+.+.+|+||.++|+++++ ||||||+||++||+++|||+|++|...||+.||+++++.
T Consensus 297 ~--~~~~~~~---------~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~ 363 (424)
T 2iya_A 297 P--ADLGEVP---------PNVEVHQWVPQLDILTKASA--FITHAGMGSTMEALSNAVPMVAVPQIAEQTMNAERIVEL 363 (424)
T ss_dssp G--GGGCSCC---------TTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHT
T ss_pred h--HHhccCC---------CCeEEecCCCHHHHHhhCCE--EEECCchhHHHHHHHcCCCEEEecCccchHHHHHHHHHC
Confidence 0 0011223 48999999999999999998 999999999999999999999999999999999999999
Q ss_pred CeEEEeeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhcccCChHHHHHHHHHHHH
Q 011765 399 QIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLK 463 (478)
Q Consensus 399 g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~~ 463 (478)
|+|+.++..+ +++++|.++|+++++ |++++++++++++.+++.++..++++.|++.++
T Consensus 364 g~g~~~~~~~----~~~~~l~~~i~~ll~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 421 (424)
T 2iya_A 364 GLGRHIPRDQ----VTAEKLREAVLAVAS---DPGVAERLAAVRQEIREAGGARAAADILEGILA 421 (424)
T ss_dssp TSEEECCGGG----CCHHHHHHHHHHHHH---CHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHH
T ss_pred CCEEEcCcCC----CCHHHHHHHHHHHHc---CHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHh
Confidence 9999998776 899999999999999 899999999999999999988999998888764
|
| >4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-47 Score=375.41 Aligned_cols=364 Identities=16% Similarity=0.126 Sum_probs=243.6
Q ss_pred CccEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCCC---CCCCCcc---
Q 011765 5 SKLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVD---NLRENAE--- 78 (478)
Q Consensus 5 ~~~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~---~l~~~~~--- 78 (478)
+.|||||+++|++||++|++.||++|++|||+|||++++.+.+.. +.| +.+..+...... ..+....
T Consensus 21 ~~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~~~-~~g------~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (400)
T 4amg_A 21 QSMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRAVA-EAG------LCAVDVSPGVNYAKLFVPDDTDVTD 93 (400)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHHHH-TTT------CEEEESSTTCCSHHHHSCCC-----
T ss_pred CCCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhhHH-hcC------CeeEecCCchhHhhhcccccccccc
Confidence 479999999999999999999999999999999999999887644 344 677766411000 0000000
Q ss_pred --ccCCCC-hhHHHHHHHHHhhhhHHHHHHHhhcCCCEEEEcCCcccHHHHHHHhCCCeEEEecchHHHHHhhccccccc
Q 011765 79 --ATIDLP-YDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAAYWLPARARELGIPSGFFSIFTAATLGYFGPSSVLI 155 (478)
Q Consensus 79 --~~~~~~-~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~ 155 (478)
...... ......+..........+.+++++++||+||+|.+.+++..+|+.+|||++.+..++......
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~~~-------- 165 (400)
T 4amg_A 94 PMHSEGLGEGFFAEMFARVSAVAVDGALRTARSWRPDLVVHTPTQGAGPLTAAALQLPCVELPLGPADSEPG-------- 165 (400)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCCHH--------
T ss_pred ccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECcchHHHHHHHHHcCCCceeecccccccccc--------
Confidence 000111 111223333334455667788889999999999999999999999999999875533211100
Q ss_pred cccCCCCCCCCcccCCCcccccccccccchhhhhhhhhhhcCCcccchhhhhhhcccc-CCcEEEEcCcCccChHHHHHH
Q 011765 156 NDSGDHLKTPEDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLK-GCDIVAVRSCMEFEPEWLKLL 234 (478)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~ns~~~le~~~~~~~ 234 (478)
+.......+..... +...... .....+... ++.....
T Consensus 166 ---------------------------~~~~~~~~l~~~~~----------~~~~~~~~~~~~~~~~~-----~~~~~~~ 203 (400)
T 4amg_A 166 ---------------------------LGALIRRAMSKDYE----------RHGVTGEPTGSVRLTTT-----PPSVEAL 203 (400)
T ss_dssp ---------------------------HHHHHHHHTHHHHH----------HTTCCCCCSCEEEEECC-----CHHHHHT
T ss_pred ---------------------------hhhHHHHHHHHHHH----------HhCCCcccccchhhccc-----Cchhhcc
Confidence 00000000000000 0000011 111112111 1111110
Q ss_pred Hh-h-cCCCeeeeccCCCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccCCC--HHHHHHHHHHHHhCCCCEE
Q 011765 235 EQ-L-HRKPVIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPS--QEELTEIALGLELSKLPFF 310 (478)
Q Consensus 235 ~~-~-~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~--~~~~~~~~~al~~~~~~~i 310 (478)
.. . ..+....+.+.... ....+.+|++..+++++||||+||....+ .+.+..++++++..+.+++
T Consensus 204 ~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v 272 (400)
T 4amg_A 204 LPEDRRSPGAWPMRYVPYN-----------GGAVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFV 272 (400)
T ss_dssp SCGGGCCTTCEECCCCCCC-----------CCEECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEE
T ss_pred CcccccCCcccCccccccc-----------ccccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccCceEE
Confidence 00 0 11112222222211 12234568888888999999999987643 3678889999999999999
Q ss_pred EEEecCCCCCCCCCCCCChhhhhhcCCCcEEEeccCChhhhhcCCCceeeeeccChhhHHHHHHhCCcEeccccccchhh
Q 011765 311 WVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQGL 390 (478)
Q Consensus 311 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~n~~~~~~vpq~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~ 390 (478)
|..++.... ....+|+ |+++.+|+||.++|+|+++ ||||||+||++||+++|||+|++|++.||+.
T Consensus 273 ~~~~~~~~~---~~~~~~~---------~v~~~~~~p~~~lL~~~~~--~v~h~G~~s~~Eal~~GvP~v~~P~~~dQ~~ 338 (400)
T 4amg_A 273 LTLGGGDLA---LLGELPA---------NVRVVEWIPLGALLETCDA--IIHHGGSGTLLTALAAGVPQCVIPHGSYQDT 338 (400)
T ss_dssp EECCTTCCC---CCCCCCT---------TEEEECCCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCC---CHH
T ss_pred EEecCcccc---ccccCCC---------CEEEEeecCHHHHhhhhhh--eeccCCccHHHHHHHhCCCEEEecCcccHHH
Confidence 998765332 3344555 8999999999999999988 9999999999999999999999999999999
Q ss_pred HHHHHhhcCeEEEeeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhcccCChHHHHHHHHHH
Q 011765 391 NAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNY 461 (478)
Q Consensus 391 na~~v~~~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~ 461 (478)
||++++++|+|+.++..+ +++ ++|+++|+ |++||+||+++++.+++.++..++++.+++.
T Consensus 339 na~~v~~~G~g~~l~~~~----~~~----~al~~lL~---d~~~r~~a~~l~~~~~~~~~~~~~a~~le~l 398 (400)
T 4amg_A 339 NRDVLTGLGIGFDAEAGS----LGA----EQCRRLLD---DAGLREAALRVRQEMSEMPPPAETAAXLVAL 398 (400)
T ss_dssp HHHHHHHHTSEEECCTTT----CSH----HHHHHHHH---CHHHHHHHHHHHHHHHTSCCHHHHHHHHHHH
T ss_pred HHHHHHHCCCEEEcCCCC----chH----HHHHHHHc---CHHHHHHHHHHHHHHHcCCCHHHHHHHHHHh
Confidence 999999999999998776 665 46778999 8999999999999999999888888877764
|
| >1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-45 Score=369.13 Aligned_cols=385 Identities=12% Similarity=0.016 Sum_probs=264.8
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCCCCCCCCccccCCCChh
Q 011765 7 LQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVDNLRENAEATIDLPYD 86 (478)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~~~~~~~~ 86 (478)
|||+|++.++.||++|+++||++|++|||+|+|++++.+.+.+...| ++|+.++....+.+. ........
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~g------~~~~~i~~~~~~~~~----~~~~~~~~ 70 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAEVG------VPHVPVGPSARAPIQ----RAKPLTAE 70 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHTT------CCEEECCC-----------CCSCCCHH
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHHcC------CeeeeCCCCHHHHhh----cccccchH
Confidence 79999999999999999999999999999999999999877676666 899988742211111 10111111
Q ss_pred HHHHHHHHHhh-hhHHHHHHHh-hcCCCEEEEcC-Cccc--HHHHHHHhCCCeEEEecchHHHHHhhccccccccccCCC
Q 011765 87 EVKYLKQSFDC-LEEPMAKLLQ-SLAPDWLLFDF-AAYW--LPARARELGIPSGFFSIFTAATLGYFGPSSVLINDSGDH 161 (478)
Q Consensus 87 ~~~~~~~~~~~-~~~~l~~ll~-~~~pD~vI~D~-~~~~--~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (478)
.+...+.. ....+.++.+ ..+||+||+|. +..+ +..+|+++|||++.++++++.....+.++
T Consensus 71 ---~~~~~~~~~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~p~---------- 137 (415)
T 1iir_A 71 ---DVRRFTTEAIATQFDEIPAAAEGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVPSPYYPP---------- 137 (415)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHHTTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSCCSSSCC----------
T ss_pred ---HHHHHHHHHHHHHHHHHHHHhcCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCCCcccCC----------
Confidence 11122221 2233444443 57999999997 6777 88999999999999987664321111100
Q ss_pred CCCCCcccCCCcccccc--cccccch-hh-------hhhhhhhhcCCcccchhhhhhhccccCCcEEEEcCcCccCh-HH
Q 011765 162 LKTPEDYTRVPNWVSFP--TTISYRL-FE-------ARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEP-EW 230 (478)
Q Consensus 162 ~~~~~~~~~~~~~~p~~--~~~~~~~-~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~-~~ 230 (478)
... +. .+|.. .+..... .. ...+......+ ++.....+.+..... .+++|+++++++ +
T Consensus 138 -~~~-----~~-~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~-~~l~~~~~~l~~~~- 206 (415)
T 1iir_A 138 -PPL-----GE-PSTQDTIDIPAQWERNNQSAYQRYGGLLNSHRDAI--GLPPVEDIFTFGYTD-HPWVAADPVLAPLQ- 206 (415)
T ss_dssp -CC---------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHT--TCCCCCCHHHHHHCS-SCEECSCTTTSCCC-
T ss_pred -ccC-----Cc-cccchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHc--CCCCCCccccccCCC-CEEEeeChhhcCCC-
Confidence 000 00 00000 0000000 00 00000011111 111111122222233 689999999886 3
Q ss_pred HHHHHhhcCCCeeeeccCCCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccCCCHHHHHHHHHHHHhCCCCEE
Q 011765 231 LKLLEQLHRKPVIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELSKLPFF 310 (478)
Q Consensus 231 ~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i 310 (478)
+..+ ++++|||+..... ...+.++.+|++.. +++|||++||.. ...+.+..++++++..+.+++
T Consensus 207 ----~~~~--~~~~vG~~~~~~~-------~~~~~~~~~~l~~~--~~~v~v~~Gs~~-~~~~~~~~~~~al~~~~~~~v 270 (415)
T 1iir_A 207 ----PTDL--DAVQTGAWILPDE-------RPLSPELAAFLDAG--PPPVYLGFGSLG-APADAVRVAIDAIRAHGRRVI 270 (415)
T ss_dssp ----CCSS--CCEECCCCCCCCC-------CCCCHHHHHHHHTS--SCCEEEECC----CCHHHHHHHHHHHHHTTCCEE
T ss_pred ----cccC--CeEeeCCCccCcc-------cCCCHHHHHHHhhC--CCeEEEeCCCCC-CcHHHHHHHHHHHHHCCCeEE
Confidence 2223 7999999876432 23456789999764 369999999987 567888889999999999999
Q ss_pred EEEecCCCCCCCCCCCCChhhhhhcCCCcEEEeccCChhhhhcCCCceeeeeccChhhHHHHHHhCCcEeccccccchhh
Q 011765 311 WVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQGL 390 (478)
Q Consensus 311 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~n~~~~~~vpq~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~ 390 (478)
|+++.... ....+| +|+.+.+|+||.++|+++++ ||||||+||++||+++|||+|++|...||+.
T Consensus 271 ~~~g~~~~----~~~~~~---------~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~ 335 (415)
T 1iir_A 271 LSRGWADL----VLPDDG---------ADCFAIGEVNHQVLFGRVAA--VIHHGGAGTTHVAARAGAPQILLPQMADQPY 335 (415)
T ss_dssp ECTTCTTC----CCSSCG---------GGEEECSSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHH
T ss_pred EEeCCCcc----cccCCC---------CCEEEeCcCChHHHHhhCCE--EEeCCChhHHHHHHHcCCCEEECCCCCccHH
Confidence 98765421 112233 38999999999999977777 9999999999999999999999999999999
Q ss_pred HHHHHhhcCeEEEeeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHh
Q 011765 391 NAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLKN 464 (478)
Q Consensus 391 na~~v~~~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~ 464 (478)
||+++++.|+|+.++..+ ++.++|.++|+++ + |++|+++++++++.++..++.+++++.|++.++.
T Consensus 336 na~~l~~~g~g~~~~~~~----~~~~~l~~~i~~l-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 401 (415)
T 1iir_A 336 YAGRVAELGVGVAHDGPI----PTFDSLSAALATA-L---TPETHARATAVAGTIRTDGAAVAARLLLDAVSRE 401 (415)
T ss_dssp HHHHHHHHTSEEECSSSS----CCHHHHHHHHHHH-T---SHHHHHHHHHHHHHSCSCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHCCCcccCCcCC----CCHHHHHHHHHHH-c---CHHHHHHHHHHHHHHhhcChHHHHHHHHHHHHhc
Confidence 999999999999998776 8999999999999 8 8999999999999999888888888877776653
|
| >1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-45 Score=363.08 Aligned_cols=383 Identities=13% Similarity=0.008 Sum_probs=264.7
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCCCCCCCCccccCCCChh
Q 011765 7 LQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVDNLRENAEATIDLPYD 86 (478)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~~~~~~~~ 86 (478)
|||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+...| ++++.++....+.+.. . .......
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~g------~~~~~~~~~~~~~~~~-~--~~~~~~~ 71 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAEVG------VPHVPVGLPQHMMLQE-G--MPPPPPE 71 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHT------CCEEECSCCGGGCCCT-T--SCCCCHH
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHcC------CeeeecCCCHHHHHhh-c--cccchhH
Confidence 79999999999999999999999999999999999998877777766 8899887321111111 0 0011110
Q ss_pred HHHHHHHHHhhhhHHHHHHHh--hcCCCEEEEcC-Cccc--HHHHHHHhCCCeEEEecchHHHHHhhccccccccccCCC
Q 011765 87 EVKYLKQSFDCLEEPMAKLLQ--SLAPDWLLFDF-AAYW--LPARARELGIPSGFFSIFTAATLGYFGPSSVLINDSGDH 161 (478)
Q Consensus 87 ~~~~~~~~~~~~~~~l~~ll~--~~~pD~vI~D~-~~~~--~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (478)
.+..........+.+.+. ..+||+||+|. +.++ +..+|+.+|||++.+++++......+.++
T Consensus 72 ---~~~~~~~~~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~p~---------- 138 (416)
T 1rrv_A 72 ---EEQRLAAMTVEMQFDAVPGAAEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLASPHLPP---------- 138 (416)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHHTTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSCCSSSCC----------
T ss_pred ---HHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCCCcccCC----------
Confidence 111111111122222222 56899999996 4556 78899999999999877653321100000
Q ss_pred CCCCCcccCCCccccc-cc---ccccch-hh-------hhhhhhhhcCCcccchhhhhhhccccCCcEEEEcCcCccChH
Q 011765 162 LKTPEDYTRVPNWVSF-PT---TISYRL-FE-------ARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPE 229 (478)
Q Consensus 162 ~~~~~~~~~~~~~~p~-~~---~~~~~~-~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~ 229 (478)
....+. +. +..... .. ...+......+ ++.....+.+..... .++++++++++++
T Consensus 139 ----------~~~~~~~~~r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~-~~l~~~~~~l~~~ 205 (416)
T 1rrv_A 139 ----------AYDEPTTPGVTDIRVLWEERAARFADRYGPTLNRRRAEI--GLPPVEDVFGYGHGE-RPLLAADPVLAPL 205 (416)
T ss_dssp ----------CBCSCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHT--TCCCCSCHHHHTTCS-SCEECSCTTTSCC
T ss_pred ----------CCCCCCCchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHc--CCCCCCchhhhccCC-CeEEccCccccCC
Confidence 000011 00 000000 00 00000111111 111111122223344 7899999998864
Q ss_pred HHHHHHhhcCCCeeeeccCCCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccC-CCHHHHHHHHHHHHhCCCC
Q 011765 230 WLKLLEQLHRKPVIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAK-PSQEELTEIALGLELSKLP 308 (478)
Q Consensus 230 ~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~-~~~~~~~~~~~al~~~~~~ 308 (478)
+..+ ++++|||+..... ...+.++.+|++.. +++|||++||... ...+.+..++++++..+.+
T Consensus 206 -----~~~~--~~~~vG~~~~~~~-------~~~~~~~~~~l~~~--~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~~~~ 269 (416)
T 1rrv_A 206 -----QPDV--DAVQTGAWLLSDE-------RPLPPELEAFLAAG--SPPVHIGFGSSSGRGIADAAKVAVEAIRAQGRR 269 (416)
T ss_dssp -----CSSC--CCEECCCCCCCCC-------CCCCHHHHHHHHSS--SCCEEECCTTCCSHHHHHHHHHHHHHHHHTTCC
T ss_pred -----CCCC--CeeeECCCccCcc-------CCCCHHHHHHHhcC--CCeEEEecCCCCccChHHHHHHHHHHHHHCCCe
Confidence 1222 6999999886532 23456788999765 3699999999874 3457788899999999999
Q ss_pred EEEEEecCCCCCCCCCCCCChhhhhhcCCCcEEEeccCChhhhhcCCCceeeeeccChhhHHHHHHhCCcEeccccccch
Q 011765 309 FFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQ 388 (478)
Q Consensus 309 ~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~n~~~~~~vpq~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ 388 (478)
++|+++.... ....+| +|+.+.+|+||.++|+++++ ||||||+||++||+++|||+|++|++.||
T Consensus 270 ~v~~~g~~~~----~~~~~~---------~~v~~~~~~~~~~ll~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ 334 (416)
T 1rrv_A 270 VILSRGWTEL----VLPDDR---------DDCFAIDEVNFQALFRRVAA--VIHHGSAGTEHVATRAGVPQLVIPRNTDQ 334 (416)
T ss_dssp EEEECTTTTC----CCSCCC---------TTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSBTH
T ss_pred EEEEeCCccc----cccCCC---------CCEEEeccCChHHHhccCCE--EEecCChhHHHHHHHcCCCEEEccCCCCc
Confidence 9999875421 112233 38999999999999987777 99999999999999999999999999999
Q ss_pred hhHHHHHhhcCeEEEeeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhcccCChHHHHHHH-HHHHHh
Q 011765 389 GLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNF-LNYLKN 464 (478)
Q Consensus 389 ~~na~~v~~~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i-~~~~~~ 464 (478)
+.||+++++.|+|+.++..+ ++.++|.++|+++ + |++|+++++++++.+++.++. ++++.+ ++.++.
T Consensus 335 ~~na~~l~~~g~g~~~~~~~----~~~~~l~~~i~~l-~---~~~~~~~~~~~~~~~~~~~~~-~~~~~i~e~~~~~ 402 (416)
T 1rrv_A 335 PYFAGRVAALGIGVAHDGPT----PTFESLSAALTTV-L---APETRARAEAVAGMVLTDGAA-AAADLVLAAVGRE 402 (416)
T ss_dssp HHHHHHHHHHTSEEECSSSC----CCHHHHHHHHHHH-T---SHHHHHHHHHHTTTCCCCHHH-HHHHHHHHHHHC-
T ss_pred HHHHHHHHHCCCccCCCCCC----CCHHHHHHHHHHh-h---CHHHHHHHHHHHHHHhhcCcH-HHHHHHHHHHhcc
Confidence 99999999999999998776 8999999999999 8 899999999999999988888 888887 665543
|
| >3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-43 Score=351.42 Aligned_cols=390 Identities=16% Similarity=0.185 Sum_probs=277.8
Q ss_pred CccEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCCCCCCCCcc---ccC
Q 011765 5 SKLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVDNLRENAE---ATI 81 (478)
Q Consensus 5 ~~~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~---~~~ 81 (478)
+||||+|++.++.||++|++.||++|+++||+|+|++++.+.+.+...| +.+..++. .++.... ...
T Consensus 19 ~m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~~G------~~~~~~~~----~~~~~~~~~~~~~ 88 (415)
T 3rsc_A 19 HMAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRAAG------ATVVPYQS----EIIDADAAEVFGS 88 (415)
T ss_dssp CCCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHTT------CEEEECCC----STTTCCHHHHHHS
T ss_pred cCCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHhcC------CEEEeccc----cccccccchhhcc
Confidence 4799999999999999999999999999999999999999988888777 99998873 2221110 111
Q ss_pred CCChhHHHH-HHHHHhhhhHHHHHHHhhcCCCEEEEc-CCcccHHHHHHHhCCCeEEEecchHHHHHhhccccccccccC
Q 011765 82 DLPYDEVKY-LKQSFDCLEEPMAKLLQSLAPDWLLFD-FAAYWLPARARELGIPSGFFSIFTAATLGYFGPSSVLINDSG 159 (478)
Q Consensus 82 ~~~~~~~~~-~~~~~~~~~~~l~~ll~~~~pD~vI~D-~~~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~~~~~ 159 (478)
......+.. +......+.+.+.+++++++||+||+| ...+++..+|+.+|||++.+.+...........+...
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~~~~~~~----- 163 (415)
T 3rsc_A 89 DDLGVRPHLMYLRENVSVLRATAEALDGDVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNEHYSFSQDMV----- 163 (415)
T ss_dssp SSSCHHHHHHHHHHHHHHHHHHHHHHSSSCCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCSSCCHHHHHH-----
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccCccccccccc-----
Confidence 112122222 333344455678888999999999999 7777889999999999998865332110000000000
Q ss_pred CCCCCCCcccCCCcccccccccccchhhhhhhhhhhcCCcccchhhhhhhccccC-CcEEEEcCcCccChHHHHHHHhhc
Q 011765 160 DHLKTPEDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKG-CDIVAVRSCMEFEPEWLKLLEQLH 238 (478)
Q Consensus 160 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~ns~~~le~~~~~~~~~~~ 238 (478)
+..+...+. ........+......+ ++.. ........ .+..+.....++++. ...+
T Consensus 164 -----------~~~~~~~p~---~~~~~~~~~~~~~~~~--g~~~--~~~~~~~~~~~~~l~~~~~~~~~~-----~~~~ 220 (415)
T 3rsc_A 164 -----------TLAGTIDPL---DLPVFRDTLRDLLAEH--GLSR--SVVDCWNHVEQLNLVFVPKAFQIA-----GDTF 220 (415)
T ss_dssp -----------HHHTCCCGG---GCHHHHHHHHHHHHHT--TCCC--CHHHHHTCCCSEEEESSCTTTSTT-----GGGC
T ss_pred -----------cccccCChh---hHHHHHHHHHHHHHHc--CCCC--ChhhhhcCCCCeEEEEcCcccCCC-----cccC
Confidence 000000000 0000001111111111 1110 00111122 266777776666644 4667
Q ss_pred CCCeeeeccCCCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccCCCHHHHHHHHHHHHhCCCCEEEEEecCCC
Q 011765 239 RKPVIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELSKLPFFWVLKKRLG 318 (478)
Q Consensus 239 ~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~ 318 (478)
+.++.++||+..... +..+|....+++++|||++||......+.+..++++++..+.+++|+++....
T Consensus 221 ~~~~~~vGp~~~~~~------------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~ 288 (415)
T 3rsc_A 221 DDRFVFVGPCFDDRR------------FLGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQPWHVVMTLGGQVD 288 (415)
T ss_dssp CTTEEECCCCCCCCG------------GGCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSSCEEEEECTTTSC
T ss_pred CCceEEeCCCCCCcc------------cCcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCCcEEEEEeCCCCC
Confidence 888999999864321 13346555567789999999998766788889999999888888888764311
Q ss_pred CCCCCCCCCChhhhhhcCCCcEEEeccCChhhhhcCCCceeeeeccChhhHHHHHHhCCcEeccccccchhhHHHHHhhc
Q 011765 319 QADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEK 398 (478)
Q Consensus 319 ~~~~~~~~~p~~~~~~~~~~n~~~~~~vpq~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~ 398 (478)
. +....+ .+|+.+.+|+|+.++|+++++ ||||||+||+.||+++|+|+|++|...||+.||+++++.
T Consensus 289 ~--~~l~~~---------~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~~ 355 (415)
T 3rsc_A 289 P--AALGDL---------PPNVEAHRWVPHVKVLEQATV--CVTHGGMGTLMEALYWGRPLVVVPQSFDVQPMARRVDQL 355 (415)
T ss_dssp G--GGGCCC---------CTTEEEESCCCHHHHHHHEEE--EEESCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHH
T ss_pred h--HHhcCC---------CCcEEEEecCCHHHHHhhCCE--EEECCcHHHHHHHHHhCCCEEEeCCcchHHHHHHHHHHc
Confidence 0 011122 348999999999999999888 999999999999999999999999999999999999999
Q ss_pred CeEEEeeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHh
Q 011765 399 QIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLKN 464 (478)
Q Consensus 399 g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~ 464 (478)
|+|..+...+ ++++.|.++|+++|+ |++++++++++++.+.+.++.+++++.|++.+..
T Consensus 356 g~g~~~~~~~----~~~~~l~~~i~~ll~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 414 (415)
T 3rsc_A 356 GLGAVLPGEK----ADGDTLLAAVGAVAA---DPALLARVEAMRGHVRRAGGAARAADAVEAYLAR 414 (415)
T ss_dssp TCEEECCGGG----CCHHHHHHHHHHHHT---CHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred CCEEEcccCC----CCHHHHHHHHHHHHc---CHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhc
Confidence 9999998877 899999999999999 8999999999999999999999999988887653
|
| >3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-42 Score=342.48 Aligned_cols=392 Identities=18% Similarity=0.185 Sum_probs=274.0
Q ss_pred ccEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCCCCCCCCccccCCCCh
Q 011765 6 KLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVDNLRENAEATIDLPY 85 (478)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~~~~~~~ 85 (478)
+|||+|++.++.||++|++.||++|+++||+|+|++++.+.+.+...| +.+..++..... .............
T Consensus 4 M~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~G------~~~~~~~~~~~~-~~~~~~~~~~~~~ 76 (402)
T 3ia7_A 4 QRHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKAAG------AEVVLYKSEFDT-FHVPEVVKQEDAE 76 (402)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHTT------CEEEECCCGGGT-SSSSSSSCCTTHH
T ss_pred CCEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHHcC------CEEEeccccccc-ccccccccccchH
Confidence 459999999999999999999999999999999999998888888777 999988731111 0000001111112
Q ss_pred hHHHH-HHHHHhhhhHHHHHHHhhcCCCEEEEc-CCcccHHHHHHHhCCCeEEEecchHHHHHhhccccccccccCCCCC
Q 011765 86 DEVKY-LKQSFDCLEEPMAKLLQSLAPDWLLFD-FAAYWLPARARELGIPSGFFSIFTAATLGYFGPSSVLINDSGDHLK 163 (478)
Q Consensus 86 ~~~~~-~~~~~~~~~~~l~~ll~~~~pD~vI~D-~~~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (478)
..+.. +........+.+.+++++++||+||+| .+.+++..+|+.+|||++.+.+...........+...
T Consensus 77 ~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~~~~~~~--------- 147 (402)
T 3ia7_A 77 TQLHLVYVRENVAILRAAEEALGDNPPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEHYSLFKELW--------- 147 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTTBCHHHHHH---------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCcccccccccc---------
Confidence 22222 333333455678888899999999999 7777889999999999998865332211000000000
Q ss_pred CCCcccCCCcccccccccccchhhhhhhhhhhcCCcccchhhhhhhccccC-CcEEEEcCcCccChHHHHHHHhhcCCCe
Q 011765 164 TPEDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKG-CDIVAVRSCMEFEPEWLKLLEQLHRKPV 242 (478)
Q Consensus 164 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~ns~~~le~~~~~~~~~~~~~~~ 242 (478)
+..+...+. ........+....... ++... ....... .+..+.....++++. ...++.++
T Consensus 148 -------~~~~~~~~~---~~~~~~~~~~~~~~~~--g~~~~--~~~~~~~~~~~~l~~~~~~~~~~-----~~~~~~~~ 208 (402)
T 3ia7_A 148 -------KSNGQRHPA---DVEAVHSVLVDLLGKY--GVDTP--VKEYWDEIEGLTIVFLPKSFQPF-----AETFDERF 208 (402)
T ss_dssp -------HHHTCCCGG---GSHHHHHHHHHHHHTT--TCCSC--HHHHHTCCCSCEEESSCGGGSTT-----GGGCCTTE
T ss_pred -------ccccccChh---hHHHHHHHHHHHHHHc--CCCCC--hhhhhcCCCCeEEEEcChHhCCc-----cccCCCCe
Confidence 000000000 0000001111112222 11110 0111111 255666665555543 45678889
Q ss_pred eeeccCCCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccCCCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCC
Q 011765 243 IPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELSKLPFFWVLKKRLGQADT 322 (478)
Q Consensus 243 ~~vGp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~ 322 (478)
.++||+...... ...|+...+++++|||++||......+.+..++++++..+.+++|+.+..... +
T Consensus 209 ~~vGp~~~~~~~------------~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~ 274 (402)
T 3ia7_A 209 AFVGPTLTGRDG------------QPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVVMAIGGFLDP--A 274 (402)
T ss_dssp EECCCCCCC----------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEEEECCTTSCG--G
T ss_pred EEeCCCCCCccc------------CCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEEEEeCCcCCh--h
Confidence 999998653221 23355555667899999999987777788899999998888888877643110 0
Q ss_pred CCCCCChhhhhhcCCCcEEEeccCChhhhhcCCCceeeeeccChhhHHHHHHhCCcEecccc-ccchhhHHHHHhhcCeE
Q 011765 323 EPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTC-YADQGLNAKLLEEKQIV 401 (478)
Q Consensus 323 ~~~~~p~~~~~~~~~~n~~~~~~vpq~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~-~~DQ~~na~~v~~~g~G 401 (478)
....+ .+|+.+..|+|+.++|+++++ ||||||+||+.||+++|+|+|++|. ..||+.||.++++.|+|
T Consensus 275 ~~~~~---------~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~~g~g 343 (402)
T 3ia7_A 275 VLGPL---------PPNVEAHQWIPFHSVLAHARA--CLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSAERVIELGLG 343 (402)
T ss_dssp GGCSC---------CTTEEEESCCCHHHHHTTEEE--EEECCCHHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHHTTSE
T ss_pred hhCCC---------CCcEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHHcCCE
Confidence 11122 348999999999999999888 9999999999999999999999999 99999999999999999
Q ss_pred EEeeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHh
Q 011765 402 ELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLKN 464 (478)
Q Consensus 402 ~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~ 464 (478)
..+...+ ++++.|.++|+++|+ |++++++++++++.+.+.++.+++++.+++.+++
T Consensus 344 ~~~~~~~----~~~~~l~~~~~~ll~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 399 (402)
T 3ia7_A 344 SVLRPDQ----LEPASIREAVERLAA---DSAVRERVRRMQRDILSSGGPARAADEVEAYLGR 399 (402)
T ss_dssp EECCGGG----CSHHHHHHHHHHHHH---CHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHH
T ss_pred EEccCCC----CCHHHHHHHHHHHHc---CHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhh
Confidence 9998876 899999999999999 8999999999999999999999999999888754
|
| >2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-41 Score=338.23 Aligned_cols=393 Identities=21% Similarity=0.216 Sum_probs=266.4
Q ss_pred CCCC-CccEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCCCCCCCCccc
Q 011765 1 MADN-SKLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVDNLRENAEA 79 (478)
Q Consensus 1 ~~~~-~~~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~ 79 (478)
|..+ ++|||+|++.++.||++|++.||++|+++||+|++++++...+.+...| ++++.++. .++.....
T Consensus 1 M~~~m~m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~~~g------~~~~~~~~----~~~~~~~~ 70 (430)
T 2iyf_A 1 MTTQTTPAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAATG------PRPVLYHS----TLPGPDAD 70 (430)
T ss_dssp -------CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHTTS------CEEEECCC----CSCCTTSC
T ss_pred CCCccccceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHHhCC------CEEEEcCC----cCcccccc
Confidence 5553 3579999999999999999999999999999999999998876666666 88888872 22211110
Q ss_pred ---cCCCChhHHHHHHHHHhhhhHHHHHHHhhcCCCEEEEcCCcccHHHHHHHhCCCeEEEecchHHHHHhhcccccccc
Q 011765 80 ---TIDLPYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAAYWLPARARELGIPSGFFSIFTAATLGYFGPSSVLIN 156 (478)
Q Consensus 80 ---~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~~ 156 (478)
........+..+..........+.+++++.+||+||+|.+.+++..+|+.+|||++.+++...........+.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~---- 146 (430)
T 2iyf_A 71 PEAWGSTLLDNVEPFLNDAIQALPQLADAYADDIPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGYEEEVA---- 146 (430)
T ss_dssp GGGGCSSHHHHHHHHHHHHHHHHHHHHHHHTTSCCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTHHHHTH----
T ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEECCccHHHHHHHHHcCCCEEEEecccccccccccccc----
Confidence 0011112222222333445567888889999999999987778889999999999998765431100000000
Q ss_pred ccCCCCCCCCcccCCCcccccccc-cccchhhhhhhhhhhcCCcccchhhhhhhccccCCcEEEEcCcCccChHHHHHHH
Q 011765 157 DSGDHLKTPEDYTRVPNWVSFPTT-ISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLE 235 (478)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~~ 235 (478)
.+.+ +.... ..... ....+.+..... ++. .........++.+++++.+++++. .
T Consensus 147 --------------~~~~-~~~~~~~~~~~-~~~~~~~~~~~~--g~~--~~~~~~~~~~~~~l~~~~~~~~~~-----~ 201 (430)
T 2iyf_A 147 --------------EPMW-REPRQTERGRA-YYARFEAWLKEN--GIT--EHPDTFASHPPRSLVLIPKALQPH-----A 201 (430)
T ss_dssp --------------HHHH-HHHHHSHHHHH-HHHHHHHHHHHT--TCC--SCHHHHHHCCSSEEECSCGGGSTT-----G
T ss_pred --------------cchh-hhhccchHHHH-HHHHHHHHHHHh--CCC--CCHHHHhcCCCcEEEeCcHHhCCC-----c
Confidence 0000 00000 00000 000111111111 111 011112224678899998888764 2
Q ss_pred hhcCCC-eeeeccCCCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccCCCHHHHHHHHHHHHhC-CCCEEEEE
Q 011765 236 QLHRKP-VIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELS-KLPFFWVL 313 (478)
Q Consensus 236 ~~~~~~-~~~vGp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~i~~~ 313 (478)
..++++ +++|||....... ..+|....+++++||+++||......+.+..++++++.. +.+++|++
T Consensus 202 ~~~~~~~v~~vG~~~~~~~~------------~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 269 (430)
T 2iyf_A 202 DRVDEDVYTFVGACQGDRAE------------EGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGWHLVLQI 269 (430)
T ss_dssp GGSCTTTEEECCCCC-----------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTTEEEEEEC
T ss_pred ccCCCccEEEeCCcCCCCCC------------CCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCCeEEEEEe
Confidence 456777 9999986532110 123555445677999999999855568888899999885 77888877
Q ss_pred ecCCCCCCCCCCCCChhhhhhcCCCcEEEeccCChhhhhcCCCceeeeeccChhhHHHHHHhCCcEeccccccchhhHHH
Q 011765 314 KKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQGLNAK 393 (478)
Q Consensus 314 ~~~~~~~~~~~~~~p~~~~~~~~~~n~~~~~~vpq~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~ 393 (478)
+..... +....+ .+|+.+..|+||.++|+++++ ||||||+||++||+++|+|+|++|...||..||+
T Consensus 270 G~~~~~--~~l~~~---------~~~v~~~~~~~~~~~l~~ad~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~ 336 (430)
T 2iyf_A 270 GRKVTP--AELGEL---------PDNVEVHDWVPQLAILRQADL--FVTHAGAGGSQEGLATATPMIAVPQAVDQFGNAD 336 (430)
T ss_dssp C---CG--GGGCSC---------CTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHH
T ss_pred CCCCCh--HHhccC---------CCCeEEEecCCHHHHhhccCE--EEECCCccHHHHHHHhCCCEEECCCccchHHHHH
Confidence 643210 001112 348999999999999999998 9999999999999999999999999999999999
Q ss_pred HHhhcCeEEEeeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHh
Q 011765 394 LLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLKN 464 (478)
Q Consensus 394 ~v~~~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~ 464 (478)
++++.|+|+.++..+ ++.++|.++|+++++ |+++++++.++++.+.+.++.+++++.+++.+++
T Consensus 337 ~~~~~g~g~~~~~~~----~~~~~l~~~i~~ll~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 400 (430)
T 2iyf_A 337 MLQGLGVARKLATEE----ATADLLRETALALVD---DPEVARRLRRIQAEMAQEGGTRRAADLIEAELPA 400 (430)
T ss_dssp HHHHTTSEEECCCC-----CCHHHHHHHHHHHHH---CHHHHHHHHHHHHHHHHHCHHHHHHHHHHTTSCC
T ss_pred HHHHcCCEEEcCCCC----CCHHHHHHHHHHHHc---CHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHhhc
Confidence 999999999998776 899999999999999 8999999999999998888778888877776643
|
| >2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-41 Score=337.86 Aligned_cols=389 Identities=15% Similarity=0.122 Sum_probs=254.7
Q ss_pred CccEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCC-CCCCCCc-ccc--
Q 011765 5 SKLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHV-DNLRENA-EAT-- 80 (478)
Q Consensus 5 ~~~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~-~~l~~~~-~~~-- 80 (478)
.+|||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+...| ++|+.++.... .++.... ...
T Consensus 19 ~~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~~~G------~~~~~i~~~~~~~~~~~~~~~~~~~ 92 (441)
T 2yjn_A 19 SHMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITAAG------LTAVPVGTDVDLVDFMTHAGHDIID 92 (441)
T ss_dssp CCCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHHTTT------CCEEECSCCCCHHHHHHHTTHHHHH
T ss_pred CccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHHHhCC------CceeecCCccchHHHhhhhhccccc
Confidence 3699999999999999999999999999999999999999887777777 99998873110 0000000 000
Q ss_pred ----CC-----C---ChhHH----HHHHHHHh-----h-hhHHHHHHHhhcCCCEEEEcCCcccHHHHHHHhCCCeEEEe
Q 011765 81 ----ID-----L---PYDEV----KYLKQSFD-----C-LEEPMAKLLQSLAPDWLLFDFAAYWLPARARELGIPSGFFS 138 (478)
Q Consensus 81 ----~~-----~---~~~~~----~~~~~~~~-----~-~~~~l~~ll~~~~pD~vI~D~~~~~~~~~A~~lgIP~i~~~ 138 (478)
.+ . ....+ ..+...+. . ....+.+++++.+||+||+|....++..+|+.+|||++.+.
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pDlVv~d~~~~~~~~aA~~lgiP~v~~~ 172 (441)
T 2yjn_A 93 YVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRKWRPDLVIWEPLTFAAPIAAAVTGTPHARLL 172 (441)
T ss_dssp HHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHHHCCSEEEECTTCTHHHHHHHHHTCCEEEEC
T ss_pred ccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHhcCCCEEEecCcchhHHHHHHHcCCCEEEEe
Confidence 00 0 11111 11211111 1 34456667788899999999877788999999999999886
Q ss_pred cchHHHHHhhccccccccccCCCCCCCCcccCCCcccccccccccchhhhhhhhhhhcCCcccchhhhhhhccccCCcEE
Q 011765 139 IFTAATLGYFGPSSVLINDSGDHLKTPEDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIV 218 (478)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (478)
..+........... . ...+.|.. .........+.......... ..... .. ..+.+
T Consensus 173 ~~~~~~~~~~~~~~--~---------------~~~~~~~~---~~~~~~~~~l~~~~~~~g~~-~~~~~---~~-~~~~~ 227 (441)
T 2yjn_A 173 WGPDITTRARQNFL--G---------------LLPDQPEE---HREDPLAEWLTWTLEKYGGP-AFDEE---VV-VGQWT 227 (441)
T ss_dssp SSCCHHHHHHHHHH--H---------------HGGGSCTT---TCCCHHHHHHHHHHHHTTCC-CCCGG---GT-SCSSE
T ss_pred cCCCcchhhhhhhh--h---------------hccccccc---cccchHHHHHHHHHHHcCCC-CCCcc---cc-CCCeE
Confidence 54322111000000 0 00000100 00000001111111111100 00001 11 23445
Q ss_pred EEcCcCccChHHHHHHHhhcCCCeeeeccCCCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccCC---CHHHH
Q 011765 219 AVRSCMEFEPEWLKLLEQLHRKPVIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKP---SQEEL 295 (478)
Q Consensus 219 l~ns~~~le~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~---~~~~~ 295 (478)
+..+.+.++++ ..++. ..+++.... ...++.+|++..+++++|||++||.... ..+.+
T Consensus 228 l~~~~~~~~~~------~~~~~--~~~~~~~~~-----------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~ 288 (441)
T 2yjn_A 228 IDPAPAAIRLD------TGLKT--VGMRYVDYN-----------GPSVVPEWLHDEPERRRVCLTLGISSRENSIGQVSI 288 (441)
T ss_dssp EECSCGGGSCC------CCCCE--EECCCCCCC-----------SSCCCCGGGSSCCSSCEEEEEC----------CCST
T ss_pred EEecCccccCC------CCCCC--CceeeeCCC-----------CCcccchHhhcCCCCCEEEEECCCCcccccChHHHH
Confidence 55544444431 11221 122222111 1123567888766778999999998853 34567
Q ss_pred HHHHHHHHhCCCCEEEEEecCCCCCCCCCCCCChhhhhhcCCCcEEEeccCChhhhhcCCCceeeeeccChhhHHHHHHh
Q 011765 296 TEIALGLELSKLPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQF 375 (478)
Q Consensus 296 ~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~n~~~~~~vpq~~vL~~~~~~~~ItHgG~~s~~eal~~ 375 (478)
..++++++..+.+++|+.++.... ....+| +|+.+.+|+||.++|+++++ ||||||+||++||+++
T Consensus 289 ~~~~~al~~~~~~~v~~~g~~~~~---~l~~~~---------~~v~~~~~~~~~~ll~~ad~--~V~~~G~~t~~Ea~~~ 354 (441)
T 2yjn_A 289 EELLGAVGDVDAEIIATFDAQQLE---GVANIP---------DNVRTVGFVPMHALLPTCAA--TVHHGGPGSWHTAAIH 354 (441)
T ss_dssp TTTHHHHHTSSSEEEECCCTTTTS---SCSSCC---------SSEEECCSCCHHHHGGGCSE--EEECCCHHHHHHHHHT
T ss_pred HHHHHHHHcCCCEEEEEECCcchh---hhccCC---------CCEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHh
Confidence 778899988899999988743210 111233 48999999999999988888 9999999999999999
Q ss_pred CCcEeccccccchhhHHHHHhhcCeEEEeeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhcccCChHHHH
Q 011765 376 GMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYV 455 (478)
Q Consensus 376 GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 455 (478)
|||+|++|+..||+.||+++++.|+|+.++..+ ++.++|.++|+++++ |++++++++++++.+.+.++.++++
T Consensus 355 G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~----~~~~~l~~~i~~ll~---~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (441)
T 2yjn_A 355 GVPQVILPDGWDTGVRAQRTQEFGAGIALPVPE----LTPDQLRESVKRVLD---DPAHRAGAARMRDDMLAEPSPAEVV 427 (441)
T ss_dssp TCCEEECCCSHHHHHHHHHHHHHTSEEECCTTT----CCHHHHHHHHHHHHH---CHHHHHHHHHHHHHHHTSCCHHHHH
T ss_pred CCCEEEeCCcccHHHHHHHHHHcCCEEEccccc----CCHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHcCCCHHHHH
Confidence 999999999999999999999999999998877 899999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHh
Q 011765 456 DNFLNYLKN 464 (478)
Q Consensus 456 ~~i~~~~~~ 464 (478)
+.|++.+..
T Consensus 428 ~~i~~~~~~ 436 (441)
T 2yjn_A 428 GICEELAAG 436 (441)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHHh
Confidence 988887754
|
| >2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-41 Score=330.67 Aligned_cols=367 Identities=13% Similarity=0.116 Sum_probs=258.8
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCCCCCC-C---CccccCC
Q 011765 7 LQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVDNLR-E---NAEATID 82 (478)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~~l~-~---~~~~~~~ 82 (478)
|||++++.++.||++|++.||++|+++||+|++++++...+.+...| +.++.++........ . ......+
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVTGVG------LPAVATTDLPIRHFITTDREGRPEAIP 74 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHTT------CCEEESCSSCHHHHHHBCTTSCBCCCC
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHHhCC------CEEEEeCCcchHHHHhhhcccCccccC
Confidence 79999999999999999999999999999999999988766666666 888887621100000 0 0000000
Q ss_pred CChhHHHH-----HHHHHhhhhHHHHHHHhhcCCCEEEEcCCcccHHHHHHHhCCCeEEEecchHHHHHhhccccccccc
Q 011765 83 LPYDEVKY-----LKQSFDCLEEPMAKLLQSLAPDWLLFDFAAYWLPARARELGIPSGFFSIFTAATLGYFGPSSVLIND 157 (478)
Q Consensus 83 ~~~~~~~~-----~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~~~ 157 (478)
........ +..........+.+++++.+||+||+|.+.+++..+|+.+|||++.++..+..
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~-------------- 140 (384)
T 2p6p_A 75 SDPVAQARFTGRWFARMAASSLPRMLDFSRAWRPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVD-------------- 140 (384)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCC--------------
T ss_pred cchHHHHHHHHHHHHhhHHHHHHHHHHHHhccCCcEEEECcchhhHHHHHHhcCCCEEEeccCCcc--------------
Confidence 00011111 12222334556777788899999999988778889999999999987532100
Q ss_pred cCCCCCCCCcccCCCcccccccccccchhhhhhhhhhhcCCcccchhhhhhhccccCCcEEEEcCcCccChHHHHHHHhh
Q 011765 158 SGDHLKTPEDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQL 237 (478)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~~~~ 237 (478)
... ........+.+....+ ++. ....++.+++++...++++ ..
T Consensus 141 --------------~~~--------~~~~~~~~~~~~~~~~--g~~-------~~~~~~~~l~~~~~~~~~~------~~ 183 (384)
T 2p6p_A 141 --------------ADG--------IHPGADAELRPELSEL--GLE-------RLPAPDLFIDICPPSLRPA------NA 183 (384)
T ss_dssp --------------CTT--------THHHHHHHTHHHHHHT--TCS-------SCCCCSEEEECSCGGGSCT------TS
T ss_pred --------------cch--------hhHHHHHHHHHHHHHc--CCC-------CCCCCCeEEEECCHHHCCC------CC
Confidence 000 0000000000011100 000 0112678888888777754 11
Q ss_pred cC-CCeeeeccCCCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccCC-----CHHHHHHHHHHHHhCCCCEEE
Q 011765 238 HR-KPVIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKP-----SQEELTEIALGLELSKLPFFW 311 (478)
Q Consensus 238 ~~-~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~-----~~~~~~~~~~al~~~~~~~i~ 311 (478)
++ .++.++++ . . ..++.+|++..+++++|||++||.... +.+.+..+++++++.+.+++|
T Consensus 184 ~~~~~~~~~~~-~--~-----------~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~~~~~~~ 249 (384)
T 2p6p_A 184 APARMMRHVAT-S--R-----------QCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDVELIV 249 (384)
T ss_dssp CCCEECCCCCC-C--C-----------CCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTTTCEEEE
T ss_pred CCCCceEecCC-C--C-----------CCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcCCcEEEE
Confidence 22 22344421 1 0 123556887655667999999998864 447788899999988999999
Q ss_pred EEecCCCCCCCCCCCCChhhhhhcCCCcEEEeccCChhhhhcCCCceeeeeccChhhHHHHHHhCCcEeccccccchhhH
Q 011765 312 VLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQGLN 391 (478)
Q Consensus 312 ~~~~~~~~~~~~~~~~p~~~~~~~~~~n~~~~~~vpq~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~n 391 (478)
+.++. . .+.+. . .++|+.+ .|+||.++|+++++ ||||||+||++||+++|+|+|++|...||+.|
T Consensus 250 ~~g~~------~----~~~l~-~-~~~~v~~-~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~dq~~~ 314 (384)
T 2p6p_A 250 AAPDT------V----AEALR-A-EVPQARV-GWTPLDVVAPTCDL--LVHHAGGVSTLTGLSAGVPQLLIPKGSVLEAP 314 (384)
T ss_dssp ECCHH------H----HHHHH-H-HCTTSEE-ECCCHHHHGGGCSE--EEECSCTTHHHHHHHTTCCEEECCCSHHHHHH
T ss_pred EeCCC------C----HHhhC-C-CCCceEE-cCCCHHHHHhhCCE--EEeCCcHHHHHHHHHhCCCEEEccCcccchHH
Confidence 87531 0 01111 1 2458999 99999999988887 99999999999999999999999999999999
Q ss_pred HHHHhhcCeEEEeeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHhcc
Q 011765 392 AKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLKNHR 466 (478)
Q Consensus 392 a~~v~~~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 466 (478)
|.++++.|+|+.++..+ ++.++|.++|+++|+ |++++++++++++.+++.++.+++++.|++.+-.+.
T Consensus 315 a~~~~~~g~g~~~~~~~----~~~~~l~~~i~~ll~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 382 (384)
T 2p6p_A 315 ARRVADYGAAIALLPGE----DSTEAIADSCQELQA---KDTYARRAQDLSREISGMPLPATVVTALEQLAHHHH 382 (384)
T ss_dssp HHHHHHHTSEEECCTTC----CCHHHHHHHHHHHHH---CHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHCCCeEecCcCC----CCHHHHHHHHHHHHc---CHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHhhhcc
Confidence 99999999999998766 899999999999999 899999999999999999999999998888775544
|
| >4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-39 Score=318.97 Aligned_cols=366 Identities=16% Similarity=0.129 Sum_probs=237.9
Q ss_pred CCccEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCC-CCCC----CC-c
Q 011765 4 NSKLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHV-DNLR----EN-A 77 (478)
Q Consensus 4 ~~~~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~-~~l~----~~-~ 77 (478)
..+|||+|++.++.||++|++.|+++|+++||+|++++++.+.+.+...| +.+..++.... ..+. .. .
T Consensus 13 ~~~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~G------~~~~~~~~~~~~~~~~~~~~~~~~ 86 (398)
T 4fzr_A 13 GSHMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTGAG------LPFAPTCPSLDMPEVLSWDREGNR 86 (398)
T ss_dssp --CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHHTT------CCEEEEESSCCHHHHHSBCTTSCB
T ss_pred CCceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHhCC------CeeEecCCccchHhhhhhhccCcc
Confidence 34799999999999999999999999999999999999988888777777 88888862100 0000 00 0
Q ss_pred cccCCCCh----hHHHHHHHHHhhhhHHHHHHHhhcCCCEEEEcCCcccHHHHHHHhCCCeEEEecchHHHHHhhccccc
Q 011765 78 EATIDLPY----DEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAAYWLPARARELGIPSGFFSIFTAATLGYFGPSSV 153 (478)
Q Consensus 78 ~~~~~~~~----~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~ 153 (478)
........ .....+......+...+.+++++++||+||+|...+++..+|+.+|||++.+.........
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~~~~------- 159 (398)
T 4fzr_A 87 TTMPREEKPLLEHIGRGYGRLVLRMRDEALALAERWKPDLVLTETYSLTGPLVAATLGIPWIEQSIRLASPEL------- 159 (398)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCHH-------
T ss_pred cccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECccccHHHHHHHhhCCCEEEeccCCCCchh-------
Confidence 00000011 1112223333345567888889999999999988888899999999999987542210000
Q ss_pred cccccCCCCCCCCcccCCCcccccccccccchhhhhhhhhhhcCCcccchhhhhhhccccCCcEEEEcCcCccChHHHHH
Q 011765 154 LINDSGDHLKTPEDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKL 233 (478)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~ 233 (478)
+.+ .....+......+ ++. .....+..+......++..
T Consensus 160 --------------------~~~---------~~~~~l~~~~~~~--~~~-------~~~~~~~~~~~~~~~~~~~---- 197 (398)
T 4fzr_A 160 --------------------IKS---------AGVGELAPELAEL--GLT-------DFPDPLLSIDVCPPSMEAQ---- 197 (398)
T ss_dssp --------------------HHH---------HHHHHTHHHHHTT--TCS-------SCCCCSEEEECSCGGGC------
T ss_pred --------------------hhH---------HHHHHHHHHHHHc--CCC-------CCCCCCeEEEeCChhhCCC----
Confidence 000 0000011011111 000 0122344555444443332
Q ss_pred HHhhcCCCeeeeccCCCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccCC--------CHHHHHHHHHHHHhC
Q 011765 234 LEQLHRKPVIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKP--------SQEELTEIALGLELS 305 (478)
Q Consensus 234 ~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~--------~~~~~~~~~~al~~~ 305 (478)
......++.++++.. ...++..|+...+++++|||++||.... ..+.+..+++++++.
T Consensus 198 -~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~ 263 (398)
T 4fzr_A 198 -PKPGTTKMRYVPYNG-------------RNDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKL 263 (398)
T ss_dssp ---CCCEECCCCCCCC-------------SSCCCCHHHHSCCSSCEEECC----------------CCSHHHHHHHGGGG
T ss_pred -CCCCCCCeeeeCCCC-------------CCCCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHHHHHhC
Confidence 110001122222110 1223455776656678999999998753 345688899999988
Q ss_pred CCCEEEEEecCCCCCCCCCCCCChhhhhhcCCCcEEEeccCChhhhhcCCCceeeeeccChhhHHHHHHhCCcEeccccc
Q 011765 306 KLPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCY 385 (478)
Q Consensus 306 ~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~n~~~~~~vpq~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~ 385 (478)
+.+++|+.++.... ....+| +|+++.+|+|+.++|+++++ ||||||.||+.||+++|+|+|++|..
T Consensus 264 ~~~~v~~~~~~~~~---~l~~~~---------~~v~~~~~~~~~~ll~~ad~--~v~~gG~~t~~Ea~~~G~P~v~~p~~ 329 (398)
T 4fzr_A 264 GFEVVVAVSDKLAQ---TLQPLP---------EGVLAAGQFPLSAIMPACDV--VVHHGGHGTTLTCLSEGVPQVSVPVI 329 (398)
T ss_dssp TCEEEECCCC-----------CC---------TTEEEESCCCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCS
T ss_pred CCEEEEEeCCcchh---hhccCC---------CcEEEeCcCCHHHHHhhCCE--EEecCCHHHHHHHHHhCCCEEecCCc
Confidence 99999887653210 112233 48999999999999999888 99999999999999999999999999
Q ss_pred cchhhHHHHHhhcCeEEEeeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhcccCChHHHHHHHH
Q 011765 386 ADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFL 459 (478)
Q Consensus 386 ~DQ~~na~~v~~~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~ 459 (478)
.||+.||.++++.|+|+.++..+ ++++.|.++|+++|+ |+++++++++.++.+.+.++.++.++.++
T Consensus 330 ~~q~~~a~~~~~~g~g~~~~~~~----~~~~~l~~ai~~ll~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 396 (398)
T 4fzr_A 330 AEVWDSARLLHAAGAGVEVPWEQ----AGVESVLAACARIRD---DSSYVGNARRLAAEMATLPTPADIVRLIE 396 (398)
T ss_dssp GGGHHHHHHHHHTTSEEECC-----------CHHHHHHHHHH---CTHHHHHHHHHHHHHTTSCCHHHHHHHHT
T ss_pred hhHHHHHHHHHHcCCEEecCccc----CCHHHHHHHHHHHHh---CHHHHHHHHHHHHHHHcCCCHHHHHHHHh
Confidence 99999999999999999998877 899999999999999 89999999999999999998877777654
|
| >3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-37 Score=309.98 Aligned_cols=359 Identities=15% Similarity=0.102 Sum_probs=249.3
Q ss_pred CccEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCCCCCCCCcc------
Q 011765 5 SKLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVDNLRENAE------ 78 (478)
Q Consensus 5 ~~~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~------ 78 (478)
.+|||+|++.++.||++|++.||++|+++||+|+++++ .+.+.+...| +.+..++... .+.....
T Consensus 19 ~~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~~~G------~~~~~~~~~~--~~~~~~~~~~~~~ 89 (398)
T 3oti_A 19 RHMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAAAAG------LEVVDVAPDY--SAVKVFEQVAKDN 89 (398)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHHTTT------CEEEESSTTC--CHHHHHHHHHHHC
T ss_pred hcCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHHhCC------CeeEecCCcc--CHHHHhhhcccCC
Confidence 46999999999999999999999999999999999999 7777777777 8998886210 0000000
Q ss_pred ---------ccCCCChhHHHHHHHHHhhhhHHHHHHHhhcCCCEEEEcCCcccHHHHHHHhCCCeEEEecchHHHHHhhc
Q 011765 79 ---------ATIDLPYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAAYWLPARARELGIPSGFFSIFTAATLGYFG 149 (478)
Q Consensus 79 ---------~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~ 149 (478)
............+......+...+.+++++++||+||+|...+++..+|+.+|||++.+.......
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~~~~~----- 164 (398)
T 3oti_A 90 PRFAETVATRPAIDLEEWGVQIAAVNRPLVDGTMALVDDYRPDLVVYEQGATVGLLAADRAGVPAVQRNQSAWRT----- 164 (398)
T ss_dssp HHHHHTGGGSCCCSGGGGHHHHHHHHGGGHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHTCCEEEECCTTCCC-----
T ss_pred ccccccccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEECchhhHHHHHHHHcCCCEEEEeccCCCc-----
Confidence 001112223334444555567788899999999999999888888999999999999764321000
Q ss_pred cccccccccCCCCCCCCcccCCCcccccccccccchhhhhhhhhhhcCCcccchhhhhhhccccCCcEEEEcCcCccChH
Q 011765 150 PSSVLINDSGDHLKTPEDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPE 229 (478)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~ 229 (478)
..+.+ .....+......+ .......+..+......+..+
T Consensus 165 ----------------------~~~~~---------~~~~~l~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~ 203 (398)
T 3oti_A 165 ----------------------RGMHR---------SIASFLTDLMDKH----------QVSLPEPVATIESFPPSLLLE 203 (398)
T ss_dssp ----------------------TTHHH---------HHHTTCHHHHHHT----------TCCCCCCSEEECSSCGGGGTT
T ss_pred ----------------------cchhh---------HHHHHHHHHHHHc----------CCCCCCCCeEEEeCCHHHCCC
Confidence 00000 0000000000000 000112233443332222211
Q ss_pred HHHHHHhhcCCCeeeeccCCCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccCC--CHHHHHHHHHHHHhCCC
Q 011765 230 WLKLLEQLHRKPVIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKP--SQEELTEIALGLELSKL 307 (478)
Q Consensus 230 ~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~--~~~~~~~~~~al~~~~~ 307 (478)
. ....++ +.++ |. .....+..|+...+++++|||++||.... ..+.+..+++++++.+.
T Consensus 204 ~---~~~~~~--~~~~-~~-------------~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~ 264 (398)
T 3oti_A 204 A---EPEGWF--MRWV-PY-------------GGGAVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGEVDA 264 (398)
T ss_dssp S---CCCSBC--CCCC-CC-------------CCCEECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHHTSSS
T ss_pred C---CCCCCC--cccc-CC-------------CCCcCCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHHcCCC
Confidence 0 000011 1111 00 00122445776666778999999998643 55778889999998899
Q ss_pred CEEEEEecCCCCCCCCCCCCChhhhhhcCCCcEEEeccCChhhhhcCCCceeeeeccChhhHHHHHHhCCcEeccccccc
Q 011765 308 PFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYAD 387 (478)
Q Consensus 308 ~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~n~~~~~~vpq~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~D 387 (478)
+++|+.++.... ....+| +|+.+..|+|+.++|+++++ ||||||.||+.||+++|+|+|++|...|
T Consensus 265 ~~v~~~g~~~~~---~l~~~~---------~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Eal~~G~P~v~~p~~~d 330 (398)
T 3oti_A 265 DFVLALGDLDIS---PLGTLP---------RNVRAVGWTPLHTLLRTCTA--VVHHGGGGTVMTAIDAGIPQLLAPDPRD 330 (398)
T ss_dssp EEEEECTTSCCG---GGCSCC---------TTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCCTTC
T ss_pred EEEEEECCcChh---hhccCC---------CcEEEEccCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEcCCCch
Confidence 999987654210 111223 48999999999999999888 9999999999999999999999999999
Q ss_pred hhhHH--HHHhhcCeEEEeeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhcccCChHHHHHHHHHHH
Q 011765 388 QGLNA--KLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYL 462 (478)
Q Consensus 388 Q~~na--~~v~~~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~ 462 (478)
|+.|| .++++.|+|+.++..+ ++++.|. ++|+ |++++++++++++.+.+.++.+++++.+++.+
T Consensus 331 q~~~a~~~~~~~~g~g~~~~~~~----~~~~~l~----~ll~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 396 (398)
T 3oti_A 331 QFQHTAREAVSRRGIGLVSTSDK----VDADLLR----RLIG---DESLRTAAREVREEMVALPTPAETVRRIVERI 396 (398)
T ss_dssp CSSCTTHHHHHHHTSEEECCGGG----CCHHHHH----HHHH---CHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHCCCEEeeCCCC----CCHHHHH----HHHc---CHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHh
Confidence 99999 9999999999998876 7887776 8898 89999999999999999999999888887754
|
| >3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-37 Score=304.13 Aligned_cols=366 Identities=14% Similarity=0.109 Sum_probs=247.7
Q ss_pred ccEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEe-cCCCC--CC----CCCCcc
Q 011765 6 KLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKI-SLPHV--DN----LRENAE 78 (478)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i-~~~~~--~~----l~~~~~ 78 (478)
+|||+|++.++.||++|++.|+++|+++||+|++++++...+.+...| +.+..+ +.+.. .. ......
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~g------~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAHGAG------LTTAGIRGNDRTGDTGGTTQLRFPNP 74 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHHHHBT------CEEEEC--------------CCSCCG
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHHHhCC------CceeeecCCccchhhhhhhccccccc
Confidence 599999999999999999999999999999999999988877777777 888877 31100 00 000000
Q ss_pred ccC-CCChhHHHHHHHHHhhh-------hHHHHHHHhhcCCCEEEEcCCcccHHHHHHHhCCCeEEEecchHHHHHhhcc
Q 011765 79 ATI-DLPYDEVKYLKQSFDCL-------EEPMAKLLQSLAPDWLLFDFAAYWLPARARELGIPSGFFSIFTAATLGYFGP 150 (478)
Q Consensus 79 ~~~-~~~~~~~~~~~~~~~~~-------~~~l~~ll~~~~pD~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~ 150 (478)
... .........+......+ ...+.+++++++||+||+|...+.+..+|+.+|||++.+.......
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~~~------ 148 (391)
T 3tsa_A 75 AFGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEAWRPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVDPT------ 148 (391)
T ss_dssp GGGCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHTTCCEEEECCSCCCT------
T ss_pred ccccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHhcCCCEEEeCcchhHHHHHHHHhCCCEEEEecCCccc------
Confidence 000 00011222223333334 6677888999999999999877778899999999999875322100
Q ss_pred ccccccccCCCCCCCCcccCCCcccccccccccchhhhhhh-hhhhcCCcccchhhhhhhccccCCcEEEEcCcCccChH
Q 011765 151 SSVLINDSGDHLKTPEDYTRVPNWVSFPTTISYRLFEARKV-FDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPE 229 (478)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~ 229 (478)
.... ......+ ......+ ++. .....+..+.....+++..
T Consensus 149 ---------------------~~~~---------~~~~~~~~~~~~~~~--~~~-------~~~~~~~~~~~~~~~~~~~ 189 (391)
T 3tsa_A 149 ---------------------AGPF---------SDRAHELLDPVCRHH--GLT-------GLPTPELILDPCPPSLQAS 189 (391)
T ss_dssp ---------------------TTHH---------HHHHHHHHHHHHHHT--TSS-------SSCCCSEEEECSCGGGSCT
T ss_pred ---------------------cccc---------cchHHHHHHHHHHHc--CCC-------CCCCCceEEEecChhhcCC
Confidence 0000 0000001 0011111 000 0112244555444333321
Q ss_pred HHHHHHhhcCCCeeeeccCCCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccC--CC-HHHHHHHHHHHHhC-
Q 011765 230 WLKLLEQLHRKPVIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAK--PS-QEELTEIALGLELS- 305 (478)
Q Consensus 230 ~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~--~~-~~~~~~~~~al~~~- 305 (478)
.......+.++ |.. ....+..|+...+++++|++++||... .. .+.+..++++ ++.
T Consensus 190 -----~~~~~~~~~~~-p~~-------------~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p 249 (391)
T 3tsa_A 190 -----DAPQGAPVQYV-PYN-------------GSGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA-TELP 249 (391)
T ss_dssp -----TSCCCEECCCC-CCC-------------CCEECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH-HTST
T ss_pred -----CCCccCCeeee-cCC-------------CCcCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh-ccCC
Confidence 01011112222 111 011234577666667899999999853 23 6778888888 777
Q ss_pred CCCEEEEEecCCCCCCCCCCCCChhhhhhcCCCcEEEeccCChhhhhcCCCceeeeeccChhhHHHHHHhCCcEeccccc
Q 011765 306 KLPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCY 385 (478)
Q Consensus 306 ~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~n~~~~~~vpq~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~ 385 (478)
+.+++|+.++.... ....+ .+|+.+.+|+|+.++|+++++ ||||||.||++||+++|+|+|++|..
T Consensus 250 ~~~~v~~~~~~~~~---~l~~~---------~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~ 315 (391)
T 3tsa_A 250 GVEAVIAVPPEHRA---LLTDL---------PDNARIAESVPLNLFLRTCEL--VICAGGSGTAFTATRLGIPQLVLPQY 315 (391)
T ss_dssp TEEEEEECCGGGGG---GCTTC---------CTTEEECCSCCGGGTGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCS
T ss_pred CeEEEEEECCcchh---hcccC---------CCCEEEeccCCHHHHHhhCCE--EEeCCCHHHHHHHHHhCCCEEecCCc
Confidence 77888887643110 11122 348999999999999988888 99999999999999999999999999
Q ss_pred cchhhHHHHHhhcCeEEEeec--cCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhcccCChHHHHHHHHHHHH
Q 011765 386 ADQGLNAKLLEEKQIVELIPR--DEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLK 463 (478)
Q Consensus 386 ~DQ~~na~~v~~~g~G~~l~~--~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~~ 463 (478)
.||+.|+.++++.|+|..++. .+ .+++.|.++|.++|+ |++++++++++++.+.+.++.+++++.+++.+.
T Consensus 316 ~~q~~~a~~~~~~g~g~~~~~~~~~----~~~~~l~~ai~~ll~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 388 (391)
T 3tsa_A 316 FDQFDYARNLAAAGAGICLPDEQAQ----SDHEQFTDSIATVLG---DTGFAAAAIKLSDEITAMPHPAALVRTLENTAA 388 (391)
T ss_dssp TTHHHHHHHHHHTTSEEECCSHHHH----TCHHHHHHHHHHHHT---CTHHHHHHHHHHHHHHTSCCHHHHHHHHHHC--
T ss_pred ccHHHHHHHHHHcCCEEecCccccc----CCHHHHHHHHHHHHc---CHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHh
Confidence 999999999999999999987 65 799999999999999 899999999999999999999988888877553
|
| >3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-34 Score=287.59 Aligned_cols=376 Identities=17% Similarity=0.185 Sum_probs=257.1
Q ss_pred CCccEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCC-------------CC
Q 011765 4 NSKLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLP-------------HV 70 (478)
Q Consensus 4 ~~~~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~-------------~~ 70 (478)
..+|||+|++.++.||++|++.||++|+++||+|++++++.+.+.+...| +.+..++.. ..
T Consensus 18 ~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~g------~~~~~~~~~~~~~~~~~~~~~~~~ 91 (412)
T 3otg_A 18 GRHMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLRKLG------FEPVATGMPVFDGFLAALRIRFDT 91 (412)
T ss_dssp CCSCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHTT------CEEEECCCCHHHHHHHHHHHHHSC
T ss_pred cceeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHHHhcC------CceeecCcccccchhhhhhhhhcc
Confidence 34799999999999999999999999999999999999987766666666 888888620 00
Q ss_pred CCCCCCccccCCCChhHHHHHHHH-HhhhhHHHHHHHhhcCCCEEEEcCCcccHHHHHHHhCCCeEEEecchHHHHHhhc
Q 011765 71 DNLRENAEATIDLPYDEVKYLKQS-FDCLEEPMAKLLQSLAPDWLLFDFAAYWLPARARELGIPSGFFSIFTAATLGYFG 149 (478)
Q Consensus 71 ~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~ll~~~~pD~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~ 149 (478)
...+.. ............+... ...+...+.+++++.+||+||+|...+++..+|+.+|||+|.+.......
T Consensus 92 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~~~~----- 164 (412)
T 3otg_A 92 DSPEGL--TPEQLSELPQIVFGRVIPQRVFDELQPVIERLRPDLVVQEISNYGAGLAALKAGIPTICHGVGRDTP----- 164 (412)
T ss_dssp SCCTTC--CHHHHTTSHHHHHHTHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHTCCEEEECCSCCCC-----
T ss_pred cCCccC--ChhHhhHHHHHHHhccchHHHHHHHHHHHHhcCCCEEEECchhhHHHHHHHHcCCCEEEecccccCc-----
Confidence 000000 0000011112222222 23344677888899999999999777778899999999999864321100
Q ss_pred cccccccccCCCCCCCCcccCCCcccccccccccchhhhhhhhhhhcCCcccchhhhhhhccccCCcEEEEcCcCccChH
Q 011765 150 PSSVLINDSGDHLKTPEDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPE 229 (478)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~ 229 (478)
+. ........+.+..... ++..... .....++.++..+..+++..
T Consensus 165 --------------------------~~-----~~~~~~~~~~~~~~~~--g~~~~~~--~~~~~~d~~i~~~~~~~~~~ 209 (412)
T 3otg_A 165 --------------------------DD-----LTRSIEEEVRGLAQRL--GLDLPPG--RIDGFGNPFIDIFPPSLQEP 209 (412)
T ss_dssp --------------------------SH-----HHHHHHHHHHHHHHHT--TCCCCSS--CCGGGGCCEEECSCGGGSCH
T ss_pred --------------------------hh-----hhHHHHHHHHHHHHHc--CCCCCcc--cccCCCCeEEeeCCHHhcCC
Confidence 00 0000000011111111 0100000 01234566666665555432
Q ss_pred HHHHHHhhcCCCeeeeccCCCCCCCCCCCCCCCChhhHhhh-cccCCCCceEEEEeCcccCCCHHHHHHHHHHHHhCCCC
Q 011765 230 WLKLLEQLHRKPVIPVGQLPTTTGDGDSDAETDTWRSIKEW-LDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELSKLP 308 (478)
Q Consensus 230 ~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~ 308 (478)
...+..... |+...... ...+..+| ....+++++|++++|+......+.+..+++++++.+.+
T Consensus 210 -----~~~~~~~~~---~~~~~~~~--------~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~l~~~~~~ 273 (412)
T 3otg_A 210 -----EFRARPRRH---ELRPVPFA--------EQGDLPAWLSSRDTARPLVYLTLGTSSGGTVEVLRAAIDGLAGLDAD 273 (412)
T ss_dssp -----HHHTCTTEE---ECCCCCCC--------CCCCCCGGGGGSCTTSCEEEEECTTTTCSCHHHHHHHHHHHHTSSSE
T ss_pred -----cccCCCCcc---eeeccCCC--------CCCCCCCccccccCCCCEEEEEcCCCCcCcHHHHHHHHHHHHcCCCE
Confidence 122221111 22111110 01123345 23344577999999999766678889999999988889
Q ss_pred EEEEEecCCCCCCCCCCCCChhhhhhcCCCcEEEeccCChhhhhcCCCceeeeeccChhhHHHHHHhCCcEeccccccch
Q 011765 309 FFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQ 388 (478)
Q Consensus 309 ~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~n~~~~~~vpq~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ 388 (478)
++|+.++.... +....++ +|+.+..|+|+.++|+++++ ||+|||+||++||+++|+|+|++|...||
T Consensus 274 ~~~~~g~~~~~--~~l~~~~---------~~v~~~~~~~~~~~l~~ad~--~v~~~g~~t~~Ea~a~G~P~v~~p~~~~q 340 (412)
T 3otg_A 274 VLVASGPSLDV--SGLGEVP---------ANVRLESWVPQAALLPHVDL--VVHHGGSGTTLGALGAGVPQLSFPWAGDS 340 (412)
T ss_dssp EEEECCSSCCC--TTCCCCC---------TTEEEESCCCHHHHGGGCSE--EEESCCHHHHHHHHHHTCCEEECCCSTTH
T ss_pred EEEEECCCCCh--hhhccCC---------CcEEEeCCCCHHHHHhcCcE--EEECCchHHHHHHHHhCCCEEecCCchhH
Confidence 99988764311 0122233 48999999999999999998 99999999999999999999999999999
Q ss_pred hhHHHHHhhcCeEEEeeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhcccCChHHHHHHHHHHHH
Q 011765 389 GLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLK 463 (478)
Q Consensus 389 ~~na~~v~~~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~~ 463 (478)
..|+.++++.|+|..++..+ ++++.|.++|.++|+ |+++++++.+.++.+.+..+.++.++.+++.+.
T Consensus 341 ~~~~~~v~~~g~g~~~~~~~----~~~~~l~~ai~~ll~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 408 (412)
T 3otg_A 341 FANAQAVAQAGAGDHLLPDN----ISPDSVSGAAKRLLA---EESYRAGARAVAAEIAAMPGPDEVVRLLPGFAS 408 (412)
T ss_dssp HHHHHHHHHHTSEEECCGGG----CCHHHHHHHHHHHHH---CHHHHHHHHHHHHHHHHSCCHHHHHTTHHHHHC
T ss_pred HHHHHHHHHcCCEEecCccc----CCHHHHHHHHHHHHh---CHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhc
Confidence 99999999999999999876 899999999999999 899999999999999988888888888888764
|
| >3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.9e-30 Score=251.00 Aligned_cols=339 Identities=17% Similarity=0.115 Sum_probs=213.5
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCcc--ccCCCCCCCCCCCeEEEEecCCCCCCCCCCccccCCCC
Q 011765 7 LQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNI--DRLPRLPQNLASMIQFVKISLPHVDNLRENAEATIDLP 84 (478)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~--~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~~~~~~ 84 (478)
.||+|...++-||++|.++||++|+++||+|+|+++.... +.+.+.| +.++.++. .+++... .....
T Consensus 3 ~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~~g------~~~~~i~~---~~~~~~~--~~~~~ 71 (365)
T 3s2u_A 3 GNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPKAG------LPLHLIQV---SGLRGKG--LKSLV 71 (365)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGGGT------CCEEECC------------------
T ss_pred CcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhhcC------CcEEEEEC---CCcCCCC--HHHHH
Confidence 4899888777799999999999999999999999987643 3455656 88888763 1221110 00111
Q ss_pred hhHHHHHHHHHhhhhHHHHHHHhhcCCCEEEEcCCc--ccHHHHHHHhCCCeEEEecchHHHHHhhccccccccccCCCC
Q 011765 85 YDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAA--YWLPARARELGIPSGFFSIFTAATLGYFGPSSVLINDSGDHL 162 (478)
Q Consensus 85 ~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~--~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (478)
...+.. ...+ ....+++++.+||+||++... .++..+|+.+|||++..-.
T Consensus 72 ~~~~~~----~~~~-~~~~~~l~~~~PDvVi~~g~~~s~p~~laA~~~~iP~vihe~----------------------- 123 (365)
T 3s2u_A 72 KAPLEL----LKSL-FQALRVIRQLRPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQ----------------------- 123 (365)
T ss_dssp -CHHHH----HHHH-HHHHHHHHHHCCSEEEECSSSTHHHHHHHHHHTTCCEEEEEC-----------------------
T ss_pred HHHHHH----HHHH-HHHHHHHHhcCCCEEEEcCCcchHHHHHHHHHcCCCEEEEec-----------------------
Confidence 111111 1111 245678889999999998533 3456889999999986411
Q ss_pred CCCCcccCCCcccccccccccchhhhhhhhhhhcCCcccchhhhhhhccccCCcEEEEcCcCccChHHHHHHHhhcCCCe
Q 011765 163 KTPEDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLHRKPV 242 (478)
Q Consensus 163 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~~~~~~~~~ 242 (478)
...|+ .. .++. .+.++.++. ++++..+ ..++.
T Consensus 124 ----------n~~~G-----~~----nr~l-------------------~~~a~~v~~-~~~~~~~---------~~~k~ 155 (365)
T 3s2u_A 124 ----------NAVAG-----TA----NRSL-------------------APIARRVCE-AFPDTFP---------ASDKR 155 (365)
T ss_dssp ----------SSSCC-----HH----HHHH-------------------GGGCSEEEE-SSTTSSC---------C---C
T ss_pred ----------chhhh-----hH----HHhh-------------------ccccceeee-ccccccc---------CcCcE
Confidence 11111 00 0110 011222222 2222111 12346
Q ss_pred eeeccCCCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccCCCHHHHHHHHHHHHhCC----CCEEEEEecCCC
Q 011765 243 IPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELSK----LPFFWVLKKRLG 318 (478)
Q Consensus 243 ~~vGp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~----~~~i~~~~~~~~ 318 (478)
.++|......... . -..+....++++.|+|..||... ......+.++++.+. ..++|+.+..
T Consensus 156 ~~~g~pvr~~~~~-----~-----~~~~~~~~~~~~~ilv~gGs~g~--~~~~~~~~~al~~l~~~~~~~vi~~~G~~-- 221 (365)
T 3s2u_A 156 LTTGNPVRGELFL-----D-----AHARAPLTGRRVNLLVLGGSLGA--EPLNKLLPEALAQVPLEIRPAIRHQAGRQ-- 221 (365)
T ss_dssp EECCCCCCGGGCC-----C-----TTSSCCCTTSCCEEEECCTTTTC--SHHHHHHHHHHHTSCTTTCCEEEEECCTT--
T ss_pred EEECCCCchhhcc-----c-----hhhhcccCCCCcEEEEECCcCCc--cccchhhHHHHHhcccccceEEEEecCcc--
Confidence 6777433221110 0 00111223456789999998774 223334556665443 3455555422
Q ss_pred CCCCCCCCCChhhhhhc--CCCcEEEeccCChh-hhhcCCCceeeeeccChhhHHHHHHhCCcEeccccc----cchhhH
Q 011765 319 QADTEPIELPDGFEERT--RGRGVVYTSWAPQL-AILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCY----ADQGLN 391 (478)
Q Consensus 319 ~~~~~~~~~p~~~~~~~--~~~n~~~~~~vpq~-~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~----~DQ~~n 391 (478)
..+...+.. ...++.+..|+++. ++++.+|+ +|||+|.+|+.|++++|+|+|.+|+. .+|..|
T Consensus 222 --------~~~~~~~~~~~~~~~~~v~~f~~dm~~~l~~aDl--vI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~N 291 (365)
T 3s2u_A 222 --------HAEITAERYRTVAVEADVAPFISDMAAAYAWADL--VICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRN 291 (365)
T ss_dssp --------THHHHHHHHHHTTCCCEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECC-----CCHHHHH
T ss_pred --------ccccccceecccccccccccchhhhhhhhccceE--EEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHH
Confidence 111222222 23477888999985 68988988 99999999999999999999999973 589999
Q ss_pred HHHHhhcCeEEEeeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhcccCChHHHHHHHHHHHH
Q 011765 392 AKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLK 463 (478)
Q Consensus 392 a~~v~~~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~~ 463 (478)
|+.+++.|+|..++..+ +|++.|.++|.++|+ |++.++++.+-++.+...+++++.++.+++..+
T Consensus 292 A~~l~~~G~a~~l~~~~----~~~~~L~~~i~~ll~---d~~~~~~m~~~a~~~~~~~aa~~ia~~i~~lar 356 (365)
T 3s2u_A 292 AEFLVRSGAGRLLPQKS----TGAAELAAQLSEVLM---HPETLRSMADQARSLAKPEATRTVVDACLEVAR 356 (365)
T ss_dssp HHHHHTTTSEEECCTTT----CCHHHHHHHHHHHHH---CTHHHHHHHHHHHHTCCTTHHHHHHHHHHHHC-
T ss_pred HHHHHHCCCEEEeecCC----CCHHHHHHHHHHHHC---CHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHc
Confidence 99999999999999887 899999999999999 888888888888888777766666666666554
|
| >2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=6.4e-28 Score=209.95 Aligned_cols=165 Identities=19% Similarity=0.359 Sum_probs=140.8
Q ss_pred CCChhhHhhhcccCCCCceEEEEeCcccC-CCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCCCCChhhhhhcCCCc
Q 011765 261 TDTWRSIKEWLDEQEKGSVVYVAFGSEAK-PSQEELTEIALGLELSKLPFFWVLKKRLGQADTEPIELPDGFEERTRGRG 339 (478)
Q Consensus 261 ~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~n 339 (478)
.+.++++.+|++..+++++|||++||... ...+.+..+++++++.+.+++|+.++. ....+++ |
T Consensus 5 ~~l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~------~~~~~~~---------~ 69 (170)
T 2o6l_A 5 KPLPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGN------KPDTLGL---------N 69 (170)
T ss_dssp CCCCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSS------CCTTCCT---------T
T ss_pred CCCCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCc------CcccCCC---------c
Confidence 34578899999887777899999999863 466888889999998889999998653 1223333 8
Q ss_pred EEEeccCChhhhhcCCCceeeeeccChhhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeeccCCCCcccHHHHH
Q 011765 340 VVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVA 419 (478)
Q Consensus 340 ~~~~~~vpq~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~~~~~~~~~l~ 419 (478)
+.+..|+|+.+++.++.+++||||||+||++||+++|+|+|++|...||..||+++++.|+|+.++..+ ++.++|.
T Consensus 70 v~~~~~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~g~g~~~~~~~----~~~~~l~ 145 (170)
T 2o6l_A 70 TRLYKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKARGAAVRVDFNT----MSSTDLL 145 (170)
T ss_dssp EEEESSCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTTSEEECCTTT----CCHHHHH
T ss_pred EEEecCCCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHHcCCeEEecccc----CCHHHHH
Confidence 999999999999977777779999999999999999999999999999999999999999999998776 8999999
Q ss_pred HHHHHHhcccchHHHHHHHHHHHHHhcc
Q 011765 420 ESLRLVLVEEKGQIYRDKAKEMKGLFGD 447 (478)
Q Consensus 420 ~~i~~ll~~~~~~~~~~~a~~~~~~~~~ 447 (478)
++|.++++ |++|+++++++++.+++
T Consensus 146 ~~i~~ll~---~~~~~~~a~~~~~~~~~ 170 (170)
T 2o6l_A 146 NALKRVIN---DPSYKENVMKLSRIQHD 170 (170)
T ss_dssp HHHHHHHH---CHHHHHHHHHHC-----
T ss_pred HHHHHHHc---CHHHHHHHHHHHHHhhC
Confidence 99999999 89999999999988753
|
| >1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=8.3e-22 Score=192.85 Aligned_cols=342 Identities=16% Similarity=0.079 Sum_probs=214.6
Q ss_pred ccEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCcc--ccCCCCCCCCCCCeEEEEecCCCCCCCCCCccccCCC
Q 011765 6 KLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNI--DRLPRLPQNLASMIQFVKISLPHVDNLRENAEATIDL 83 (478)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~--~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~~~~~ 83 (478)
+|||++++.+..||..+++.||++|+++||+|++++..... +.+...| +++..++.. .+... .
T Consensus 6 ~mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~g------~~~~~~~~~---~~~~~------~ 70 (364)
T 1f0k_A 6 GKRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKHG------IEIDFIRIS---GLRGK------G 70 (364)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGGGT------CEEEECCCC---CCTTC------C
T ss_pred CcEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhccccC------CceEEecCC---ccCcC------c
Confidence 38999999777799999999999999999999999976532 2233334 777777531 11110 0
Q ss_pred ChhHHHHHHHHHhhhhHHHHHHHhhcCCCEEEEcCCc--ccHHHHHHHhCCCeEEEecchHHHHHhhccccccccccCCC
Q 011765 84 PYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAA--YWLPARARELGIPSGFFSIFTAATLGYFGPSSVLINDSGDH 161 (478)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~--~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (478)
....+....... .....+.+++++.+||+|+++... ..+..+++.+|+|++......
T Consensus 71 ~~~~~~~~~~~~-~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~-------------------- 129 (364)
T 1f0k_A 71 IKALIAAPLRIF-NAWRQARAIMKAYKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNG-------------------- 129 (364)
T ss_dssp HHHHHTCHHHHH-HHHHHHHHHHHHHCCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSS--------------------
T ss_pred cHHHHHHHHHHH-HHHHHHHHHHHhcCCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCC--------------------
Confidence 000000011111 123356677888899999998543 345677889999998642210
Q ss_pred CCCCCcccCCCcccccccccccchhhhhhhhhhhcCCcccchhhhhhhccccCCcEEEEcCcCccChHHHHHHHhhcCCC
Q 011765 162 LKTPEDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLHRKP 241 (478)
Q Consensus 162 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~~~~~~~~ 241 (478)
.+. . ...+ ..+.++.+++.+... ++ +
T Consensus 130 -------------~~~-----~----~~~~-------------------~~~~~d~v~~~~~~~------------~~-~ 155 (364)
T 1f0k_A 130 -------------IAG-----L----TNKW-------------------LAKIATKVMQAFPGA------------FP-N 155 (364)
T ss_dssp -------------SCC-----H----HHHH-------------------HTTTCSEEEESSTTS------------SS-S
T ss_pred -------------CCc-----H----HHHH-------------------HHHhCCEEEecChhh------------cC-C
Confidence 000 0 0000 012345555433211 22 4
Q ss_pred eeeeccCCCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccCCCHHHHHHHHHHHHhC--CCCEEEEEecCCCC
Q 011765 242 VIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELS--KLPFFWVLKKRLGQ 319 (478)
Q Consensus 242 ~~~vGp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~ 319 (478)
+..+|.-..... .... .....+...+++++|+++.|+.. .......++++++.+ +.+++++++..
T Consensus 156 ~~~i~n~v~~~~-------~~~~-~~~~~~~~~~~~~~il~~~g~~~--~~k~~~~li~a~~~l~~~~~~l~i~G~~--- 222 (364)
T 1f0k_A 156 AEVVGNPVRTDV-------LALP-LPQQRLAGREGPVRVLVVGGSQG--ARILNQTMPQVAAKLGDSVTIWHQSGKG--- 222 (364)
T ss_dssp CEECCCCCCHHH-------HTSC-CHHHHHTTCCSSEEEEEECTTTC--CHHHHHHHHHHHHHHGGGEEEEEECCTT---
T ss_pred ceEeCCccchhh-------cccc-hhhhhcccCCCCcEEEEEcCchH--hHHHHHHHHHHHHHhcCCcEEEEEcCCc---
Confidence 556663221100 0000 01112222234557777778875 344444455666543 44555555432
Q ss_pred CCCCCCCCChhhhhh---cCCCcEEEeccCCh-hhhhcCCCceeeeeccChhhHHHHHHhCCcEeccccc---cchhhHH
Q 011765 320 ADTEPIELPDGFEER---TRGRGVVYTSWAPQ-LAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCY---ADQGLNA 392 (478)
Q Consensus 320 ~~~~~~~~p~~~~~~---~~~~n~~~~~~vpq-~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~---~DQ~~na 392 (478)
. .+.+.+. ..-+++.+..|+++ .+++..+++ +|+++|.+++.||+++|+|+|+.|.. .||..|+
T Consensus 223 ---~----~~~l~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~--~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~ 293 (364)
T 1f0k_A 223 ---S----QQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADV--VVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNA 293 (364)
T ss_dssp ---C----HHHHHHHHHHTTCTTSEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHH
T ss_pred ---h----HHHHHHHHhhcCCCceEEecchhhHHHHHHhCCE--EEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHH
Confidence 1 1222221 12247889899954 678888888 99999999999999999999999987 7999999
Q ss_pred HHHhhcCeEEEeeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHhcccc
Q 011765 393 KLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLKNHRCL 468 (478)
Q Consensus 393 ~~v~~~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 468 (478)
..+.+.|.|..++..+ ++.++|+++|.++ + ++.++++.+-++...+..+.++.++.+++.+++.-++
T Consensus 294 ~~~~~~g~g~~~~~~d----~~~~~la~~i~~l-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~ 360 (364)
T 1f0k_A 294 LPLEKAGAAKIIEQPQ----LSVDAVANTLAGW-S----RETLLTMAERARAASIPDATERVANEVSRVARALEHH 360 (364)
T ss_dssp HHHHHTTSEEECCGGG----CCHHHHHHHHHTC-C----HHHHHHHHHHHHHTCCTTHHHHHHHHHHHHHTTC---
T ss_pred HHHHhCCcEEEecccc----CCHHHHHHHHHhc-C----HHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHhh
Confidence 9999999999998765 6799999999998 5 5566677666666666666788889999988766544
|
| >3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=3.5e-16 Score=145.37 Aligned_cols=264 Identities=15% Similarity=0.116 Sum_probs=163.9
Q ss_pred cEEEEecC----CCccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCCCCCCCCccccCC
Q 011765 7 LQIAMFPW----LAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVDNLRENAEATID 82 (478)
Q Consensus 7 ~~il~~~~----~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~~~~ 82 (478)
|||+|-+- -+.||+.+++.||++|+ +|+|++.....+.+...| +.+..++ . . +
T Consensus 1 mki~ir~Da~~~IG~GHvmRcl~LA~~l~----~v~F~~~~~~~~~~~~~g------~~v~~l~----~---~------d 57 (282)
T 3hbm_A 1 MKVLFRSDSSSQIGFGHIKRDLVLAKQYS----DVSFACLPLEGSLIDEIP------YPVYELS----S---E------S 57 (282)
T ss_dssp CCEEEEECCBTTTBSHHHHHHHHHHTTCS----SEEEEECCCTTCCGGGCC------SCEEECS----S---S------C
T ss_pred CEEEEEEecCCCccccHHHHHHHHHHHHH----hCEEEEecCcHhHHHHCC------CeEEEcC----c---c------C
Confidence 67888543 36799999999999999 899999776555555444 5555553 1 0 0
Q ss_pred CChhHHHHHHHHHhhhhHHHHHHHhhcCCCEEEEcCCcccHHHH---HHHhCCCeEEEecchHHHHHhhccccccccccC
Q 011765 83 LPYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAAYWLPAR---ARELGIPSGFFSIFTAATLGYFGPSSVLINDSG 159 (478)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~~~~~~~---A~~lgIP~i~~~~~~~~~~~~~~~~~~~~~~~~ 159 (478)
...+.+++++.+||+||.|.+....... ....+++++.+--..
T Consensus 58 ----------------~~~~~~~l~~~~~d~lIvD~Y~~~~~~~~~lk~~~~~~i~~iDD~~------------------ 103 (282)
T 3hbm_A 58 ----------------IYELINLIKEEKFELLIIDHYGISVDDEKLIKLETGVKILSFDDEI------------------ 103 (282)
T ss_dssp ----------------HHHHHHHHHHHTCSEEEEECTTCCHHHHHHHHHHHCCEEEEECSSC------------------
T ss_pred ----------------HHHHHHHHHhCCCCEEEEECCCCCHHHHHHHHHhcCcEEEEEecCC------------------
Confidence 1234566667799999999887755432 233577877661100
Q ss_pred CCCCCCCcccCCCcccccccccccchhhhhhhhhhhcCCcccchhhhhhhccccCCcEEEEcCcCccChHHHHHHHhhcC
Q 011765 160 DHLKTPEDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLHR 239 (478)
Q Consensus 160 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~~~~~~ 239 (478)
. ...+|+++=.+... +.. .+ ....|
T Consensus 104 --------------------------------------------------~-~~~~Dllin~~~~~-~~~--~Y-~~~~p 128 (282)
T 3hbm_A 104 --------------------------------------------------K-PHHCDILLNVNAYA-KAS--DY-EGLVP 128 (282)
T ss_dssp --------------------------------------------------C-CCCCSEEEECSTTC-CGG--GG-TTTCC
T ss_pred --------------------------------------------------C-cccCCEEEeCCccc-chh--hc-cccCC
Confidence 0 11234333222211 100 00 01112
Q ss_pred C-CeeeeccCCCCCCCCCCCCCCCChhhHhhhcc-cCCCCceEEEEeCcccCCCHHHHHHHHHHHHhCCCCEEEEEecCC
Q 011765 240 K-PVIPVGQLPTTTGDGDSDAETDTWRSIKEWLD-EQEKGSVVYVAFGSEAKPSQEELTEIALGLELSKLPFFWVLKKRL 317 (478)
Q Consensus 240 ~-~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~ 317 (478)
+ .....||=....+ ++..+.-. ..++.+.|+|++|.... ......++++|.... ++.++.+..
T Consensus 129 ~~~~~l~G~~Y~~lR-----------~eF~~~~~~~r~~~~~ILv~~GG~d~--~~l~~~vl~~L~~~~-~i~vv~G~~- 193 (282)
T 3hbm_A 129 FKCEVRCGFSYALIR-----------EEFYQEAKENRKKKYDFFICMGGTDI--KNLSLQIASELPKTK-IISIATSSS- 193 (282)
T ss_dssp -CCEEEESGGGCCCC-----------HHHHHHTTCCCCCCEEEEEECCSCCT--TCHHHHHHHHSCTTS-CEEEEECTT-
T ss_pred CCCeEeeCCcccccC-----------HHHHHhhhhccccCCeEEEEECCCch--hhHHHHHHHHhhcCC-CEEEEECCC-
Confidence 2 2456676222111 11111100 12234589999997543 345666888886544 555555432
Q ss_pred CCCCCCCCCCChhhhhhc-CCCcEEEeccCChh-hhhcCCCceeeeeccChhhHHHHHHhCCcEeccccccchhhHHHHH
Q 011765 318 GQADTEPIELPDGFEERT-RGRGVVYTSWAPQL-AILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQGLNAKLL 395 (478)
Q Consensus 318 ~~~~~~~~~~p~~~~~~~-~~~n~~~~~~vpq~-~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v 395 (478)
....+.+.+.. ...|+.+..|+++. +++..+++ +||+|| +|++|+++.|+|+|++|+..+|..||+.+
T Consensus 194 -------~~~~~~l~~~~~~~~~v~v~~~~~~m~~~m~~aDl--vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l 263 (282)
T 3hbm_A 194 -------NPNLKKLQKFAKLHNNIRLFIDHENIAKLMNESNK--LIISAS-SLVNEALLLKANFKAICYVKNQESTATWL 263 (282)
T ss_dssp -------CTTHHHHHHHHHTCSSEEEEESCSCHHHHHHTEEE--EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHH
T ss_pred -------chHHHHHHHHHhhCCCEEEEeCHHHHHHHHHHCCE--EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHH
Confidence 11223333222 23489999999886 58888888 999999 89999999999999999999999999999
Q ss_pred hhcCeEEEeecc
Q 011765 396 EEKQIVELIPRD 407 (478)
Q Consensus 396 ~~~g~G~~l~~~ 407 (478)
++.|++..+..-
T Consensus 264 ~~~G~~~~~~~~ 275 (282)
T 3hbm_A 264 AKKGYEVEYKYL 275 (282)
T ss_dssp HHTTCEEECGGG
T ss_pred HHCCCEEEcchh
Confidence 999999998763
|
| >2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A | Back alignment and structure |
|---|
Probab=99.62 E-value=9.4e-16 Score=136.60 Aligned_cols=139 Identities=15% Similarity=0.155 Sum_probs=96.2
Q ss_pred ccCCCCceEEEEeCcccCCCHHHHHHH-----HHHHHhCC-CCEEEEEecCCCCCCCCCCC-------------CChhh-
Q 011765 272 DEQEKGSVVYVAFGSEAKPSQEELTEI-----ALGLELSK-LPFFWVLKKRLGQADTEPIE-------------LPDGF- 331 (478)
Q Consensus 272 ~~~~~~~~v~vs~Gs~~~~~~~~~~~~-----~~al~~~~-~~~i~~~~~~~~~~~~~~~~-------------~p~~~- 331 (478)
...+++++|||+.||... -.+.+..+ +++|...+ .+++++++..... .... +|.+.
T Consensus 23 ~~~~~~~~VlVtgGS~~~-~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~~---~~~~~~~~~~~~~~~~l~p~~~~ 98 (224)
T 2jzc_A 23 EGIIEEKALFVTCGATVP-FPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSS---EFEHLVQERGGQRESQKIPIDQF 98 (224)
T ss_dssp -CCCCSCCEEEECCSCCS-CHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSCC---CCCSHHHHHTCEECSCCCSSCTT
T ss_pred CCCCCCCEEEEEcCCchH-HHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCchh---hHHHHHHhhhccccccccccccc
Confidence 333457899999999742 34444443 48887777 7888888754210 0000 11000
Q ss_pred -----hh----hcCCCcEEEeccCChh-hhhc-CCCceeeeeccChhhHHHHHHhCCcEeccccc----cchhhHHHHHh
Q 011765 332 -----EE----RTRGRGVVYTSWAPQL-AILA-HDSVGGFLTHAGWSSVVEALQFGMPLIVLTCY----ADQGLNAKLLE 396 (478)
Q Consensus 332 -----~~----~~~~~n~~~~~~vpq~-~vL~-~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~----~DQ~~na~~v~ 396 (478)
.+ ....-++.+++|+++. ++++ .+++ +|||||+||++|++++|+|+|++|.. .||..||++++
T Consensus 99 ~~~~~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~ 176 (224)
T 2jzc_A 99 GCGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFV 176 (224)
T ss_dssp CTTCSCEEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHH
T ss_pred cccccccccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHH
Confidence 00 0011256678898885 7899 9999 99999999999999999999999974 47999999999
Q ss_pred hcCeEEEeeccCCCCcccHHHHHHHHHHH
Q 011765 397 EKQIVELIPRDEGDGFFTRNSVAESLRLV 425 (478)
Q Consensus 397 ~~g~G~~l~~~~~~~~~~~~~l~~~i~~l 425 (478)
+.|+|+.+ +.+.|.++|+++
T Consensus 177 ~~G~~~~~---------~~~~L~~~i~~l 196 (224)
T 2jzc_A 177 ELGYVWSC---------APTETGLIAGLR 196 (224)
T ss_dssp HHSCCCEE---------CSCTTTHHHHHH
T ss_pred HCCCEEEc---------CHHHHHHHHHHH
Confidence 99998765 345566677666
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=3.1e-12 Score=127.93 Aligned_cols=377 Identities=13% Similarity=0.045 Sum_probs=189.2
Q ss_pred CCccEEEEecC---C--------CccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCCCC
Q 011765 4 NSKLQIAMFPW---L--------AFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVDN 72 (478)
Q Consensus 4 ~~~~~il~~~~---~--------~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~~ 72 (478)
+++|||++++. | .-|+-..+..|++.|.++||+|++++.......... .....++.++.++......
T Consensus 18 ~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~--~~~~~~v~v~~~~~~~~~~ 95 (438)
T 3c48_A 18 GSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEI--VRVAENLRVINIAAGPYEG 95 (438)
T ss_dssp -CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCSE--EEEETTEEEEEECCSCSSS
T ss_pred cchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCccc--ccccCCeEEEEecCCCccc
Confidence 45899999985 2 247788899999999999999999987653221110 0001347777776311111
Q ss_pred CCCCccccCCCChhHHHHHHHHHhhhhHHHHHH-Hhhc-CCCEEEEcCCcc--cHHHHHHHhCCCeEEEecchHHHHHhh
Q 011765 73 LRENAEATIDLPYDEVKYLKQSFDCLEEPMAKL-LQSL-APDWLLFDFAAY--WLPARARELGIPSGFFSIFTAATLGYF 148 (478)
Q Consensus 73 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-l~~~-~pD~vI~D~~~~--~~~~~A~~lgIP~i~~~~~~~~~~~~~ 148 (478)
+. ..... ..+.. +...+.+. ++.. +||+|++..... .+..+++.+++|+|............
T Consensus 96 ~~-----~~~~~----~~~~~----~~~~~~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~- 161 (438)
T 3c48_A 96 LS-----KEELP----TQLAA----FTGGMLSFTRREKVTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAAVKNS- 161 (438)
T ss_dssp CC-----GGGGG----GGHHH----HHHHHHHHHHHHTCCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSSCHHHHSC-
T ss_pred cc-----hhHHH----HHHHH----HHHHHHHHHHhccCCCCEEEeCCccHHHHHHHHHHHcCCCEEEEecCCcccccc-
Confidence 00 00111 11111 11122222 4333 499999875322 34456788899998765533211100
Q ss_pred ccccccccccCCCCCCCCcccCCCcccccccccccchhhhhhhhhhhcCCcccchhhhhhhccccCCcEEEEcCcCccCh
Q 011765 149 GPSSVLINDSGDHLKTPEDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEP 228 (478)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~ 228 (478)
...... .... .+. . .......+.+|.+++.+ .
T Consensus 162 -------------------------~~~~~~--~~~~----~~~----------~--~~~~~~~~~~d~ii~~s-----~ 193 (438)
T 3c48_A 162 -------------------------YRDDSD--TPES----EAR----------R--ICEQQLVDNADVLAVNT-----Q 193 (438)
T ss_dssp -------------------------C----C--CHHH----HHH----------H--HHHHHHHHHCSEEEESS-----H
T ss_pred -------------------------cccccC--Ccch----HHH----------H--HHHHHHHhcCCEEEEcC-----H
Confidence 000000 0000 000 0 00011244678888877 3
Q ss_pred HHHHHHHhhcC---CCeeeeccCCCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccC-CCHHHHHHHHHHHHh
Q 011765 229 EWLKLLEQLHR---KPVIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAK-PSQEELTEIALGLEL 304 (478)
Q Consensus 229 ~~~~~~~~~~~---~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~-~~~~~~~~~~~al~~ 304 (478)
...+.+...++ .++..|..-.....-. . ......+.+++-+.-.. +..+++..|+... ...+.+.+.+..+.+
T Consensus 194 ~~~~~~~~~~g~~~~k~~vi~ngvd~~~~~-~-~~~~~~~~~r~~~~~~~-~~~~i~~~G~~~~~Kg~~~li~a~~~l~~ 270 (438)
T 3c48_A 194 EEMQDLMHHYDADPDRISVVSPGADVELYS-P-GNDRATERSRRELGIPL-HTKVVAFVGRLQPFKGPQVLIKAVAALFD 270 (438)
T ss_dssp HHHHHHHHHHCCCGGGEEECCCCCCTTTSC-C-C----CHHHHHHTTCCS-SSEEEEEESCBSGGGCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCChhheEEecCCccccccC-C-cccchhhhhHHhcCCCC-CCcEEEEEeeecccCCHHHHHHHHHHHHh
Confidence 33444444332 2355555322111100 0 00001111333333222 3366777888763 223444443333332
Q ss_pred C--CCCEEEEEecCCCCCCCCCCCCChhhhhh---cC-CCcEEEeccCChh---hhhcCCCceeeeec----cChhhHHH
Q 011765 305 S--KLPFFWVLKKRLGQADTEPIELPDGFEER---TR-GRGVVYTSWAPQL---AILAHDSVGGFLTH----AGWSSVVE 371 (478)
Q Consensus 305 ~--~~~~i~~~~~~~~~~~~~~~~~p~~~~~~---~~-~~n~~~~~~vpq~---~vL~~~~~~~~ItH----gG~~s~~e 371 (478)
. +..+.+++-+... ..+...+.+.+. .. .+++.+..|+|+. +++..+++ +|.- |..+++.|
T Consensus 271 ~~p~~~~~l~i~G~~~----~~g~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~E 344 (438)
T 3c48_A 271 RDPDRNLRVIICGGPS----GPNATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADI--VAVPSFNESFGLVAME 344 (438)
T ss_dssp HCTTCSEEEEEECCBC----------CHHHHHHHHTTCTTTEEEECCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHH
T ss_pred hCCCcceEEEEEeCCC----CCCcHHHHHHHHHHHcCCCCcEEEcCCCChHHHHHHHHhCCE--EEECccccCCchHHHH
Confidence 2 2233333222100 001111222221 11 3589999999874 56777888 6643 33468999
Q ss_pred HHHhCCcEeccccccchhhHHHHHhhcCeEEEeeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhcccCCh
Q 011765 372 ALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFGDKGRH 451 (478)
Q Consensus 372 al~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~ 451 (478)
|+++|+|+|+.+. ......+.+.+.|..++.. +.++++++|.++++ |++.++++.+-+......-..
T Consensus 345 ama~G~PvI~~~~----~~~~e~i~~~~~g~~~~~~------d~~~la~~i~~l~~---~~~~~~~~~~~~~~~~~~~s~ 411 (438)
T 3c48_A 345 AQASGTPVIAARV----GGLPIAVAEGETGLLVDGH------SPHAWADALATLLD---DDETRIRMGEDAVEHARTFSW 411 (438)
T ss_dssp HHHTTCCEEEESC----TTHHHHSCBTTTEEEESSC------CHHHHHHHHHHHHH---CHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCCEEecCC----CChhHHhhCCCcEEECCCC------CHHHHHHHHHHHHc---CHHHHHHHHHHHHHHHHhCCH
Confidence 9999999999653 4555666666788888653 78999999999999 666655544433333222223
Q ss_pred HHHHHHHHHHHHhcc
Q 011765 452 DRYVDNFLNYLKNHR 466 (478)
Q Consensus 452 ~~~~~~i~~~~~~~~ 466 (478)
+..++.+++.+++..
T Consensus 412 ~~~~~~~~~~~~~~~ 426 (438)
T 3c48_A 412 AATAAQLSSLYNDAI 426 (438)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 455566666665444
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=8.9e-12 Score=123.09 Aligned_cols=351 Identities=12% Similarity=0.028 Sum_probs=191.4
Q ss_pred CCCccEEEEecCC---C-ccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCCCCCCCCcc
Q 011765 3 DNSKLQIAMFPWL---A-FGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVDNLRENAE 78 (478)
Q Consensus 3 ~~~~~~il~~~~~---~-~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~ 78 (478)
..++|||++++.. . .|+-..+..+++.|.++||+|++++............. ....+..++. ..
T Consensus 17 ~~~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~---~~~~~~~~~~--------~~- 84 (406)
T 2gek_A 17 RGSHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDYVV---SGGKAVPIPY--------NG- 84 (406)
T ss_dssp ----CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCCCTTEE---ECCCCC---------------
T ss_pred CCCcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCccccCCcccc---cCCcEEeccc--------cC-
Confidence 3568999998742 2 46668899999999999999999998765431111100 0001111110 00
Q ss_pred ccCCCChhHHHHHHHHHhhhhHHHHHHHhhcCCCEEEEcCCcc--cHHHHHHHhCCCeEEEecchHHHHHhhcccccccc
Q 011765 79 ATIDLPYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAAY--WLPARARELGIPSGFFSIFTAATLGYFGPSSVLIN 156 (478)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~~--~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~~ 156 (478)
..... .........+.+++++.+||+|++..... .+..++..+++|+|.......
T Consensus 85 ~~~~~---------~~~~~~~~~l~~~l~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~-------------- 141 (406)
T 2gek_A 85 SVARL---------RFGPATHRKVKKWIAEGDFDVLHIHEPNAPSLSMLALQAAEGPIVATFHTST-------------- 141 (406)
T ss_dssp ---------------CCHHHHHHHHHHHHHHCCSEEEEECCCSSSHHHHHHHHEESSEEEEECCCC--------------
T ss_pred Ccccc---------cccHHHHHHHHHHHHhcCCCEEEECCccchHHHHHHHHhcCCCEEEEEcCcc--------------
Confidence 00000 00001224566777788999999875433 245667778999997644210
Q ss_pred ccCCCCCCCCcccCCCcccccccccccchhhhhhhhhhhcCCcccchhhhhhhccccCCcEEEEcCcCccChHHHHHHHh
Q 011765 157 DSGDHLKTPEDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQ 236 (478)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~~~ 236 (478)
+. ......+. . .+....+.+|.+++.+ ....+.+..
T Consensus 142 -------------------~~-------~~~~~~~~---~----------~~~~~~~~~d~ii~~s-----~~~~~~~~~ 177 (406)
T 2gek_A 142 -------------------TK-------SLTLSVFQ---G----------ILRPYHEKIIGRIAVS-----DLARRWQME 177 (406)
T ss_dssp -------------------CS-------HHHHHHHH---S----------TTHHHHTTCSEEEESS-----HHHHHHHHH
T ss_pred -------------------hh-------hhhHHHHH---H----------HHHHHHhhCCEEEECC-----HHHHHHHHH
Confidence 00 00000000 0 0112345678888877 333444444
Q ss_pred hcCCCeeeeccCCCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcc-cC-CCHHHHHHHHHHHHhC--CCCEEEE
Q 011765 237 LHRKPVIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSE-AK-PSQEELTEIALGLELS--KLPFFWV 312 (478)
Q Consensus 237 ~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~-~~-~~~~~~~~~~~al~~~--~~~~i~~ 312 (478)
.++.+-..+..-....... . .... ....++..+++..|+. .. ...+.+.+.+..+.+. +.+++++
T Consensus 178 ~~~~~~~vi~~~v~~~~~~-~---~~~~-------~~~~~~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~ 246 (406)
T 2gek_A 178 ALGSDAVEIPNGVDVASFA-D---APLL-------DGYPREGRTVLFLGRYDEPRKGMAVLLAALPKLVARFPDVEILIV 246 (406)
T ss_dssp HHSSCEEECCCCBCHHHHH-T---CCCC-------TTCSCSSCEEEEESCTTSGGGCHHHHHHHHHHHHTTSTTCEEEEE
T ss_pred hcCCCcEEecCCCChhhcC-C---Cchh-------hhccCCCeEEEEEeeeCccccCHHHHHHHHHHHHHHCCCeEEEEE
Confidence 4543322333211100000 0 0000 0001122567778887 42 2334444444444332 3443333
Q ss_pred EecCCCCCCCCCCCCChhhhhhcC--CCcEEEeccCChh---hhhcCCCceeeee----ccCh-hhHHHHHHhCCcEecc
Q 011765 313 LKKRLGQADTEPIELPDGFEERTR--GRGVVYTSWAPQL---AILAHDSVGGFLT----HAGW-SSVVEALQFGMPLIVL 382 (478)
Q Consensus 313 ~~~~~~~~~~~~~~~p~~~~~~~~--~~n~~~~~~vpq~---~vL~~~~~~~~It----HgG~-~s~~eal~~GvP~l~~ 382 (478)
+.. .. +.+.+..+ .+++.+..++++. +++..+++ +|. +.|+ +++.||+++|+|+|+.
T Consensus 247 -G~~---------~~-~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~e~~~~~~~Ea~a~G~PvI~~ 313 (406)
T 2gek_A 247 -GRG---------DE-DELREQAGDLAGHLRFLGQVDDATKASAMRSADV--YCAPHLGGESFGIVLVEAMAAGTAVVAS 313 (406)
T ss_dssp -SCS---------CH-HHHHHHTGGGGGGEEECCSCCHHHHHHHHHHSSE--EEECCCSCCSSCHHHHHHHHHTCEEEEC
T ss_pred -cCC---------cH-HHHHHHHHhccCcEEEEecCCHHHHHHHHHHCCE--EEecCCCCCCCchHHHHHHHcCCCEEEe
Confidence 221 11 23332222 4689999999985 67788888 653 3444 5999999999999996
Q ss_pred ccccchhhHHHHHhhcCeEEEeeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhcccCChHHHHHHHHHHH
Q 011765 383 TCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYL 462 (478)
Q Consensus 383 P~~~DQ~~na~~v~~~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~ 462 (478)
+. ......+.+.+.|...+.. +.+++.++|.++++ +++.++++.+-+......-+.+..++.+++.+
T Consensus 314 ~~----~~~~e~i~~~~~g~~~~~~------d~~~l~~~i~~l~~---~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 380 (406)
T 2gek_A 314 DL----DAFRRVLADGDAGRLVPVD------DADGMAAALIGILE---DDQLRAGYVARASERVHRYDWSVVSAQIMRVY 380 (406)
T ss_dssp CC----HHHHHHHTTTTSSEECCTT------CHHHHHHHHHHHHH---CHHHHHHHHHHHHHHGGGGBHHHHHHHHHHHH
T ss_pred cC----CcHHHHhcCCCceEEeCCC------CHHHHHHHHHHHHc---CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 55 5566667766778877654 78999999999999 77766665554444444555567778888877
Q ss_pred HhccccC
Q 011765 463 KNHRCLR 469 (478)
Q Consensus 463 ~~~~~~~ 469 (478)
++.....
T Consensus 381 ~~~~~~~ 387 (406)
T 2gek_A 381 ETVSGAG 387 (406)
T ss_dssp HHHCCTT
T ss_pred HHHHhhc
Confidence 7655433
|
| >1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3 | Back alignment and structure |
|---|
Probab=99.55 E-value=1.8e-13 Score=134.13 Aligned_cols=108 Identities=17% Similarity=0.160 Sum_probs=76.1
Q ss_pred CcEEEeccCCh---hhhhcCCCceeeeeccChhhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeeccCCCCccc
Q 011765 338 RGVVYTSWAPQ---LAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFT 414 (478)
Q Consensus 338 ~n~~~~~~vpq---~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~~~~~~ 414 (478)
+++.+.++++. .++++.+++ ||+..| |.+.||+++|+|+|+.+...++.. +.+.|.|..++ .+
T Consensus 255 ~~v~~~g~~g~~~~~~~~~~ad~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~----~~~~g~g~lv~-------~d 320 (376)
T 1v4v_A 255 RNFVLLDPLEYGSMAALMRASLL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPE----GLKAGILKLAG-------TD 320 (376)
T ss_dssp TTEEEECCCCHHHHHHHHHTEEE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHH----HHHHTSEEECC-------SC
T ss_pred CCEEEECCCCHHHHHHHHHhCcE--EEECCc-CHHHHHHHcCCCEEeccCCCcchh----hhcCCceEECC-------CC
Confidence 57888866655 468888888 998873 446699999999999886666655 34568887774 27
Q ss_pred HHHHHHHHHHHhcccchHHHHHHHHHHHHHhcccCChHHHHHHHHHHH
Q 011765 415 RNSVAESLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYL 462 (478)
Q Consensus 415 ~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~ 462 (478)
.++|.++|.++++ |++.++++.+.++.+.+...+++.++.+.+.+
T Consensus 321 ~~~la~~i~~ll~---d~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~ 365 (376)
T 1v4v_A 321 PEGVYRVVKGLLE---NPEELSRMRKAKNPYGDGKAGLMVARGVAWRL 365 (376)
T ss_dssp HHHHHHHHHHHHT---CHHHHHHHHHSCCSSCCSCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHh---ChHhhhhhcccCCCCCCChHHHHHHHHHHHHh
Confidence 8999999999999 77777666654444444444445555444433
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=6.6e-12 Score=123.45 Aligned_cols=349 Identities=12% Similarity=0.037 Sum_probs=194.7
Q ss_pred CccEEEEecC--C--CccCHHHHHHHHHHHHhCCCeEEEEeCCCccc----cCCCCCCCCCCCeEEEEecCCCCCCCCCC
Q 011765 5 SKLQIAMFPW--L--AFGHMIPWLELAKLIAQKGHKIFFISTPRNID----RLPRLPQNLASMIQFVKISLPHVDNLREN 76 (478)
Q Consensus 5 ~~~~il~~~~--~--~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~----~~~~~g~~~~~~i~~~~i~~~~~~~l~~~ 76 (478)
++|||++++. + ..|.-..+..|++.| +||+|++++...... ..... ++.+..++. ..
T Consensus 3 ~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~~~~------~~~~~~~~~----~~--- 67 (394)
T 3okp_A 3 ASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYDKTL------DYEVIRWPR----SV--- 67 (394)
T ss_dssp -CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHHTTC------SSEEEEESS----SS---
T ss_pred CCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhcccc------ceEEEEccc----cc---
Confidence 4899999864 3 348888899999999 799999999876543 11222 377777752 10
Q ss_pred ccccCCCChhHHHHHHHHHhhhhHHHHHHHhhcCCCEEEEcCCcc--cHHHHHHHhCCCeEEEecchHHHHHhhcccccc
Q 011765 77 AEATIDLPYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAAY--WLPARARELGIPSGFFSIFTAATLGYFGPSSVL 154 (478)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~~--~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~ 154 (478)
.... ......+.+++++.+||+|++....+ ....+++.+++|.+++.........
T Consensus 68 -----~~~~----------~~~~~~l~~~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~-------- 124 (394)
T 3okp_A 68 -----MLPT----------PTTAHAMAEIIREREIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVGW-------- 124 (394)
T ss_dssp -----CCSC----------HHHHHHHHHHHHHTTCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHHH--------
T ss_pred -----cccc----------hhhHHHHHHHHHhcCCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhhh--------
Confidence 0000 02234667778888999999865433 3455688899995543221110000
Q ss_pred ccccCCCCCCCCcccCCCcccccccccccchhhhhhhhhhhcCCcccchhhhhhhccccCCcEEEEcCcCccChHHHHHH
Q 011765 155 INDSGDHLKTPEDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLL 234 (478)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~ 234 (478)
.. . .+ . ........+.+|.++..| ....+.+
T Consensus 125 --------------------~~------~------~~----------~--~~~~~~~~~~~d~ii~~s-----~~~~~~~ 155 (394)
T 3okp_A 125 --------------------SM------L------PG----------S--RQSLRKIGTEVDVLTYIS-----QYTLRRF 155 (394)
T ss_dssp --------------------TT------S------HH----------H--HHHHHHHHHHCSEEEESC-----HHHHHHH
T ss_pred --------------------hh------c------ch----------h--hHHHHHHHHhCCEEEEcC-----HHHHHHH
Confidence 00 0 00 0 000111234668788877 4444444
Q ss_pred HhhcC--CCeeeeccCCCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccC-CCHHHHHHHHHHHHhC--CCCE
Q 011765 235 EQLHR--KPVIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAK-PSQEELTEIALGLELS--KLPF 309 (478)
Q Consensus 235 ~~~~~--~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~-~~~~~~~~~~~al~~~--~~~~ 309 (478)
...++ .++..+..-.....-. . .......++.+.+.-.+ +..+++..|+... ...+.+.+.+..+.+. +.++
T Consensus 156 ~~~~~~~~~~~vi~ngv~~~~~~-~-~~~~~~~~~~~~~~~~~-~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l 232 (394)
T 3okp_A 156 KSAFGSHPTFEHLPSGVDVKRFT-P-ATPEDKSATRKKLGFTD-TTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQL 232 (394)
T ss_dssp HHHHCSSSEEEECCCCBCTTTSC-C-CCHHHHHHHHHHTTCCT-TCCEEEEESCSCGGGCHHHHHHHHHHHHHHSTTCEE
T ss_pred HHhcCCCCCeEEecCCcCHHHcC-C-CCchhhHHHHHhcCCCc-CceEEEEEeccccccCHHHHHHHHHHHHhhCCCeEE
Confidence 44442 2455555222111100 0 00111233344443333 3367777888653 2234444444444332 4444
Q ss_pred EEEEecCCCCCCCCCCCCChhhhhhc--CCCcEEEeccCChhh---hhcCCCceeeee-----------ccChhhHHHHH
Q 011765 310 FWVLKKRLGQADTEPIELPDGFEERT--RGRGVVYTSWAPQLA---ILAHDSVGGFLT-----------HAGWSSVVEAL 373 (478)
Q Consensus 310 i~~~~~~~~~~~~~~~~~p~~~~~~~--~~~n~~~~~~vpq~~---vL~~~~~~~~It-----------HgG~~s~~eal 373 (478)
+++ +.+ ...+.+.+.. ..+++.+..|+|+.+ ++..+++ +|. -|.-+++.||+
T Consensus 233 ~i~-G~g---------~~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~ps~~~~~~~~~e~~~~~~~Ea~ 300 (394)
T 3okp_A 233 LIV-GSG---------RYESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADI--FAMPARTRGGGLDVEGLGIVYLEAQ 300 (394)
T ss_dssp EEE-CCC---------TTHHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCSE--EEECCCCBGGGTBCCSSCHHHHHHH
T ss_pred EEE-cCc---------hHHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCCE--EEecCccccccccccccCcHHHHHH
Confidence 443 221 1112222211 135899999998644 6777888 665 45567999999
Q ss_pred HhCCcEeccccccchhhHHHHHhhcCeEEEeeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHH-hcccCChH
Q 011765 374 QFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGL-FGDKGRHD 452 (478)
Q Consensus 374 ~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~-~~~~~~~~ 452 (478)
++|+|+|+.+..+ ....+.+ |.|...+.. +.+++.++|.++++ |++.++++.+-+.. ..+.-..+
T Consensus 301 a~G~PvI~~~~~~----~~e~i~~-~~g~~~~~~------d~~~l~~~i~~l~~---~~~~~~~~~~~~~~~~~~~~s~~ 366 (394)
T 3okp_A 301 ACGVPVIAGTSGG----APETVTP-ATGLVVEGS------DVDKLSELLIELLD---DPIRRAAMGAAGRAHVEAEWSWE 366 (394)
T ss_dssp HTTCCEEECSSTT----GGGGCCT-TTEEECCTT------CHHHHHHHHHHHHT---CHHHHHHHHHHHHHHHHHHTBHH
T ss_pred HcCCCEEEeCCCC----hHHHHhc-CCceEeCCC------CHHHHHHHHHHHHh---CHHHHHHHHHHHHHHHHHhCCHH
Confidence 9999999976532 2223333 478777654 89999999999999 66655555444333 33334567
Q ss_pred HHHHHHHHHHHhccccC
Q 011765 453 RYVDNFLNYLKNHRCLR 469 (478)
Q Consensus 453 ~~~~~i~~~~~~~~~~~ 469 (478)
..++.+++.+++..++.
T Consensus 367 ~~~~~~~~~~~~~~r~~ 383 (394)
T 3okp_A 367 IMGERLTNILQSEPRKL 383 (394)
T ss_dssp HHHHHHHHHHHSCCC--
T ss_pred HHHHHHHHHHHHhccCc
Confidence 78888888888776544
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=1.4e-11 Score=121.44 Aligned_cols=356 Identities=16% Similarity=0.117 Sum_probs=188.4
Q ss_pred ccEEEEecCCCc-cCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCCCCCCCCccccCCCC
Q 011765 6 KLQIAMFPWLAF-GHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVDNLRENAEATIDLP 84 (478)
Q Consensus 6 ~~~il~~~~~~~-gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~~~~~~ 84 (478)
++++....+|.. |.-..+..|+++|+++||+|++++....... .. ..+++.+..++... ++. .....
T Consensus 15 ~~~~~~~~~p~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~-~~----~~~~i~~~~~~~~~---~~~----~~~~~ 82 (394)
T 2jjm_A 15 KLKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGLPFRL-NK----VYPNIYFHEVTVNQ---YSV----FQYPP 82 (394)
T ss_dssp CCEEEEECCC--CHHHHHHHHHHHHHHHTTCEEEEECSSCC-----C----CCTTEEEECCCCC-----------CCSCC
T ss_pred eeeeehhcCCCCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCcc-cc----cCCceEEEeccccc---ccc----ccccc
Confidence 568888888765 6677788999999999999999997643221 11 11347766654211 100 00111
Q ss_pred hhHHHHHHHHHhhhhHHHHHHHhhcCCCEEEEcCCccc--HHHHHH-Hh--CCCeEEEecchHHHHHhhccccccccccC
Q 011765 85 YDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAAYW--LPARAR-EL--GIPSGFFSIFTAATLGYFGPSSVLINDSG 159 (478)
Q Consensus 85 ~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~~~--~~~~A~-~l--gIP~i~~~~~~~~~~~~~~~~~~~~~~~~ 159 (478)
. .. .....+.+++++.+||+|++....+. ...++. .+ ++|+|......... ...
T Consensus 83 ~-~~--------~~~~~l~~~l~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~--~~~---------- 141 (394)
T 2jjm_A 83 Y-DL--------ALASKMAEVAQRENLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDIT--VLG---------- 141 (394)
T ss_dssp H-HH--------HHHHHHHHHHHHHTCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHH--TTT----------
T ss_pred c-cH--------HHHHHHHHHHHHcCCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCccc--ccC----------
Confidence 0 00 12235666777889999998743332 233444 33 59988765432110 000
Q ss_pred CCCCCCCcccCCCcccccccccccchhhhhhhhhhhcCCcccchhhhhhhccccCCcEEEEcCcCccChHHHHHHHhhcC
Q 011765 160 DHLKTPEDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLHR 239 (478)
Q Consensus 160 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~~~~~~ 239 (478)
..+. +. . .....++.+|.++..+ ....+.+...++
T Consensus 142 --------------~~~~-----~~-----~----------------~~~~~~~~ad~ii~~s-----~~~~~~~~~~~~ 176 (394)
T 2jjm_A 142 --------------SDPS-----LN-----N----------------LIRFGIEQSDVVTAVS-----HSLINETHELVK 176 (394)
T ss_dssp --------------TCTT-----TH-----H----------------HHHHHHHHSSEEEESC-----HHHHHHHHHHTC
T ss_pred --------------CCHH-----HH-----H----------------HHHHHHhhCCEEEECC-----HHHHHHHHHhhC
Confidence 0000 00 0 0011234567777776 444444444443
Q ss_pred --CCeeeeccCCCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccC-CCHHHHHHHHHHHHh-CCCCEEEEEec
Q 011765 240 --KPVIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAK-PSQEELTEIALGLEL-SKLPFFWVLKK 315 (478)
Q Consensus 240 --~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~-~~~~~~~~~~~al~~-~~~~~i~~~~~ 315 (478)
.++..+..-....... .....++.+-+...+ +..+++..|+... ...+.+.+.+..+.+ .+.+++++ +.
T Consensus 177 ~~~~~~vi~ngv~~~~~~-----~~~~~~~~~~~~~~~-~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~l~i~-G~ 249 (394)
T 2jjm_A 177 PNKDIQTVYNFIDERVYF-----KRDMTQLKKEYGISE-SEKILIHISNFRKVKRVQDVVQAFAKIVTEVDAKLLLV-GD 249 (394)
T ss_dssp CSSCEEECCCCCCTTTCC-----CCCCHHHHHHTTCC----CEEEEECCCCGGGTHHHHHHHHHHHHHSSCCEEEEE-CC
T ss_pred CcccEEEecCCccHHhcC-----CcchHHHHHHcCCCC-CCeEEEEeeccccccCHHHHHHHHHHHHhhCCCEEEEE-CC
Confidence 3566665322211100 111223333332212 2356667788663 223333333333332 24444333 32
Q ss_pred CCCCCCCCCCCCChhhhhhcC----CCcEEEeccCCh-hhhhcCCCceeee----eccChhhHHHHHHhCCcEecccccc
Q 011765 316 RLGQADTEPIELPDGFEERTR----GRGVVYTSWAPQ-LAILAHDSVGGFL----THAGWSSVVEALQFGMPLIVLTCYA 386 (478)
Q Consensus 316 ~~~~~~~~~~~~p~~~~~~~~----~~n~~~~~~vpq-~~vL~~~~~~~~I----tHgG~~s~~eal~~GvP~l~~P~~~ 386 (478)
+ ...+.+.+..+ .+++.+..+..+ .+++..+++ +| .-|..+++.||+++|+|+|+.+..
T Consensus 250 g---------~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~PvI~~~~~- 317 (394)
T 2jjm_A 250 G---------PEFCTILQLVKNLHIEDRVLFLGKQDNVAELLAMSDL--MLLLSEKESFGLVLLEAMACGVPCIGTRVG- 317 (394)
T ss_dssp C---------TTHHHHHHHHHTTTCGGGBCCCBSCSCTHHHHHTCSE--EEECCSCCSCCHHHHHHHHTTCCEEEECCT-
T ss_pred c---------hHHHHHHHHHHHcCCCCeEEEeCchhhHHHHHHhCCE--EEeccccCCCchHHHHHHhcCCCEEEecCC-
Confidence 1 11122222111 246777666544 568888888 77 445567999999999999997653
Q ss_pred chhhHHHHHhhcCeEEEeeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhc-ccCChHHHHHHHHHHHHhc
Q 011765 387 DQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFG-DKGRHDRYVDNFLNYLKNH 465 (478)
Q Consensus 387 DQ~~na~~v~~~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~i~~~~~~~ 465 (478)
.....+.+.+.|...+.. +.++++++|.++++ |++.++++.+-+.... +.-..++.++.+++.+++.
T Consensus 318 ---~~~e~v~~~~~g~~~~~~------d~~~la~~i~~l~~---~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 385 (394)
T 2jjm_A 318 ---GIPEVIQHGDTGYLCEVG------DTTGVADQAIQLLK---DEELHRNMGERARESVYEQFRSEKIVSQYETIYYDV 385 (394)
T ss_dssp ---TSTTTCCBTTTEEEECTT------CHHHHHHHHHHHHH---CHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHT
T ss_pred ---ChHHHhhcCCceEEeCCC------CHHHHHHHHHHHHc---CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 233344445678877653 78999999999999 6665555444433333 4555667788888888776
Q ss_pred cccCC
Q 011765 466 RCLRK 470 (478)
Q Consensus 466 ~~~~~ 470 (478)
..++.
T Consensus 386 ~~~~~ 390 (394)
T 2jjm_A 386 LRDDK 390 (394)
T ss_dssp C----
T ss_pred Hhhhh
Confidence 65543
|
| >3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=3.9e-11 Score=119.67 Aligned_cols=385 Identities=12% Similarity=0.025 Sum_probs=192.2
Q ss_pred CccEEEEecCC----C-ccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCC------CC--------CCCCCCeEEEEe
Q 011765 5 SKLQIAMFPWL----A-FGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPR------LP--------QNLASMIQFVKI 65 (478)
Q Consensus 5 ~~~~il~~~~~----~-~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~------~g--------~~~~~~i~~~~i 65 (478)
++|||++++.. . .|--.-+..||++|+++||+|+++++......-.. .+ .....++.+..+
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~ 80 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRI 80 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEEE
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEEEe
Confidence 47999998743 3 35556689999999999999999996543321100 00 001133677766
Q ss_pred cCCCCCCCCCCccccCCCChhHHHH----HHHHHhhhhHHHHHHHh-hcCCCEEEEcCCcc--cHHHHHHHhCCCeEEEe
Q 011765 66 SLPHVDNLRENAEATIDLPYDEVKY----LKQSFDCLEEPMAKLLQ-SLAPDWLLFDFAAY--WLPARARELGIPSGFFS 138 (478)
Q Consensus 66 ~~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~ll~-~~~pD~vI~D~~~~--~~~~~A~~lgIP~i~~~ 138 (478)
+. .+ ... .......... +......+...+..++. ..+||+|.+..... .+..+++..++|+|...
T Consensus 81 ~~----~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~v~~~ 152 (439)
T 3fro_A 81 GG----GL---LDS-EDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKYFKIPAVFTI 152 (439)
T ss_dssp ES----GG---GGC-SSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESGGGHHHHHHHHHHHCCCEEEEE
T ss_pred cc----hh---ccc-cccccCCcchhhhhhHHHHHHHHHHHHHHhccCCCCeEEEecchhhhhhHHHHhhccCCCEEEEe
Confidence 52 10 000 0111101222 22222223333333332 56999999875433 24566788899999765
Q ss_pred cchHHHHHhhccccccccccCCCCCCCCcccCCCcccccccccccchhhhhhhhhhhcCCcccchhhhhhhccccCCcEE
Q 011765 139 IFTAATLGYFGPSSVLINDSGDHLKTPEDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIV 218 (478)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (478)
..... ..++.. .+.. ..+.. ... ..........+..+|.+
T Consensus 153 h~~~~-----------------------------~~~~~~---~~~~---~~~~~-~~~----~~~~~~~~~~~~~ad~i 192 (439)
T 3fro_A 153 HRLNK-----------------------------SKLPAF---YFHE---AGLSE-LAP----YPDIDPEHTGGYIADIV 192 (439)
T ss_dssp SCCCC-----------------------------CCEEHH---HHHH---TTCGG-GCC----SSEECHHHHHHHHCSEE
T ss_pred ccccc-----------------------------ccCchH---HhCc---ccccc-ccc----cceeeHhhhhhhhccEE
Confidence 42210 000000 0000 00000 000 00001112224467777
Q ss_pred EEcCcCccChHHHHHHHh---hcCCCeeeecc-CCCCCCCCCCC--CCCCChhhHhhhcccCCCCceEEEEeCccc-C-C
Q 011765 219 AVRSCMEFEPEWLKLLEQ---LHRKPVIPVGQ-LPTTTGDGDSD--AETDTWRSIKEWLDEQEKGSVVYVAFGSEA-K-P 290 (478)
Q Consensus 219 l~ns~~~le~~~~~~~~~---~~~~~~~~vGp-~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~-~-~ 290 (478)
+..|.. ..+.... ..+.++..|.. +....-..... .......++.+-+.-. ++ .+++..|+.. . .
T Consensus 193 i~~S~~-----~~~~~~~~~~~~~~~i~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~i~~~G~~~~~~K 265 (439)
T 3fro_A 193 TTVSRG-----YLIDEWGFFRNFEGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFGMD-EG-VTFMFIGRFDRGQK 265 (439)
T ss_dssp EESCHH-----HHHHTHHHHGGGTTSEEECCCCCCTTTSCGGGSCSCHHHHHHHHHHHHTCC-SC-EEEEEECCSSCTTB
T ss_pred EecCHH-----HHHHHhhhhhhcCCceeecCCCCCchhcCcccccchhhhhHHHHHHHcCCC-CC-cEEEEEcccccccc
Confidence 777732 2222111 12334554442 21111000000 0001122333333332 33 7778888877 3 3
Q ss_pred CHHHHHHHHHHHHhCC--CCEEEEEecCCCCCCCCCCCCChhh---hhhcCCCcEEEeccCChhh---hhcCCCceeeee
Q 011765 291 SQEELTEIALGLELSK--LPFFWVLKKRLGQADTEPIELPDGF---EERTRGRGVVYTSWAPQLA---ILAHDSVGGFLT 362 (478)
Q Consensus 291 ~~~~~~~~~~al~~~~--~~~i~~~~~~~~~~~~~~~~~p~~~---~~~~~~~n~~~~~~vpq~~---vL~~~~~~~~It 362 (478)
+.+.+.+.+..+.... ..+-+++-+. ......+.+ .++.. +++.+..|+++.+ ++..+++ +|.
T Consensus 266 g~~~li~a~~~l~~~~~~~~~~l~i~G~------g~~~~~~~l~~~~~~~~-~~~~~~g~~~~~~~~~~~~~adv--~v~ 336 (439)
T 3fro_A 266 GVDVLLKAIEILSSKKEFQEMRFIIIGK------GDPELEGWARSLEEKHG-NVKVITEMLSREFVRELYGSVDF--VII 336 (439)
T ss_dssp CHHHHHHHHHHHHTSGGGGGEEEEEECC------CCHHHHHHHHHHHHHCT-TEEEECSCCCHHHHHHHHTTCSE--EEE
T ss_pred cHHHHHHHHHHHHhcccCCCeEEEEEcC------CChhHHHHHHHHHhhcC-CEEEEcCCCCHHHHHHHHHHCCE--EEe
Confidence 4555555555555422 2333333221 110000111 12222 4566778898854 6777887 662
Q ss_pred ----ccChhhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeeccCCCCcccHHHHHHHHHHHhc-cc-chHHHHH
Q 011765 363 ----HAGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLV-EE-KGQIYRD 436 (478)
Q Consensus 363 ----HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~-~~-~~~~~~~ 436 (478)
-|--+++.||+++|+|+|+... ......+. .|.|..++.. +.++++++|.++++ ++ .-..+.+
T Consensus 337 ps~~e~~~~~~~EAma~G~Pvi~s~~----~~~~e~~~-~~~g~~~~~~------d~~~la~~i~~ll~~~~~~~~~~~~ 405 (439)
T 3fro_A 337 PSYFEPFGLVALEAMCLGAIPIASAV----GGLRDIIT-NETGILVKAG------DPGELANAILKALELSRSDLSKFRE 405 (439)
T ss_dssp CBSCCSSCHHHHHHHHTTCEEEEESS----THHHHHCC-TTTCEEECTT------CHHHHHHHHHHHHHHTTTTTHHHHH
T ss_pred CCCCCCccHHHHHHHHCCCCeEEcCC----CCcceeEE-cCceEEeCCC------CHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 2334799999999999999643 34444443 4688888764 88999999999998 31 1133444
Q ss_pred HHHHHHHHhcccCChHHHHHHHHHHHHhcccc
Q 011765 437 KAKEMKGLFGDKGRHDRYVDNFLNYLKNHRCL 468 (478)
Q Consensus 437 ~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 468 (478)
++++.. +.-..+..++.+++.+++...+
T Consensus 406 ~~~~~~----~~~s~~~~~~~~~~~~~~~~~~ 433 (439)
T 3fro_A 406 NCKKRA----MSFSWEKSAERYVKAYTGSIDR 433 (439)
T ss_dssp HHHHHH----HTSCHHHHHHHHHHHHHTCSCC
T ss_pred HHHHHH----hhCcHHHHHHHHHHHHHHHHHh
Confidence 444433 3344567778888888776554
|
| >3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.48 E-value=2e-13 Score=134.42 Aligned_cols=345 Identities=12% Similarity=0.092 Sum_probs=180.5
Q ss_pred CCCCccEEEEecCCCccCHHHHHHHHHHHHhC-CCeEEEEeCCCcccc----CCCCCCCCCCCeE-EEEecCCCCCCCCC
Q 011765 2 ADNSKLQIAMFPWLAFGHMIPWLELAKLIAQK-GHKIFFISTPRNIDR----LPRLPQNLASMIQ-FVKISLPHVDNLRE 75 (478)
Q Consensus 2 ~~~~~~~il~~~~~~~gH~~p~l~La~~L~~r-Gh~Vt~~~~~~~~~~----~~~~g~~~~~~i~-~~~i~~~~~~~l~~ 75 (478)
.++++|||+++. +......=+..|.++|.++ |+++.++.+....+. .+..+ ++ -+.+ ..
T Consensus 21 ~~~~m~ki~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~tG~h~~~~~~~~~~~~------i~~~~~l--------~~ 85 (396)
T 3dzc_A 21 QSNAMKKVLIVF-GTRPEAIKMAPLVQQLCQDNRFVAKVCVTGQHREMLDQVLELFS------ITPDFDL--------NI 85 (396)
T ss_dssp ---CCEEEEEEE-CSHHHHHHHHHHHHHHHHCTTEEEEEEECCSSSHHHHHHHHHTT------CCCSEEC--------CC
T ss_pred HhCCCCeEEEEE-eccHhHHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhcC------CCCceee--------ec
Confidence 345577887765 4555566668899999987 799987776655421 11111 11 0011 00
Q ss_pred CccccCCCChhHHHHHHHHHhhhhHHHHHHHhhcCCCEEEEc--CCc-ccHHHHHHHhCCCeEEEecchHHHHHhhcccc
Q 011765 76 NAEATIDLPYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFD--FAA-YWLPARARELGIPSGFFSIFTAATLGYFGPSS 152 (478)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D--~~~-~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~ 152 (478)
... ...... ........+.+++++.+||+|++- ... ..+..+|..+|||++.+.... ..+
T Consensus 86 --~~~---~~~~~~----~~~~~~~~l~~~l~~~kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~~ag~-rs~------- 148 (396)
T 3dzc_A 86 --MEP---GQTLNG----VTSKILLGMQQVLSSEQPDVVLVHGDTATTFAASLAAYYQQIPVGHVEAGL-RTG------- 148 (396)
T ss_dssp --CCT---TCCHHH----HHHHHHHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHTTTCCEEEETCCC-CCS-------
T ss_pred --CCC---CCCHHH----HHHHHHHHHHHHHHhcCCCEEEEECCchhHHHHHHHHHHhCCCEEEEECCc-ccc-------
Confidence 000 001111 123334477888889999999863 233 345688999999987542100 000
Q ss_pred ccccccCCCCCCCCcccCCCcccccccccccchhhhhhhhhhhcCCcccchhhhhhhccccCCcEEEEcCcCccChHHHH
Q 011765 153 VLINDSGDHLKTPEDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLK 232 (478)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~ 232 (478)
..+.+++. .+ .+.+ ..+.++.++..+ ....+
T Consensus 149 -------------------~~~~~~~~----------~~-------------~r~~--~~~~a~~~~~~s-----e~~~~ 179 (396)
T 3dzc_A 149 -------------------NIYSPWPE----------EG-------------NRKL--TAALTQYHFAPT-----DTSRA 179 (396)
T ss_dssp -------------------CTTSSTTH----------HH-------------HHHH--HHHTCSEEEESS-----HHHHH
T ss_pred -------------------ccccCCcH----------HH-------------HHHH--HHHhcCEEECCC-----HHHHH
Confidence 00000000 00 0000 012346666655 22222
Q ss_pred HHHh-hcC-CCeeeec-cCCCCCCCCCCCCCCCC-------hhhHhhhccc-CCCCceEEEEeCcccCCCHHHHHHHHHH
Q 011765 233 LLEQ-LHR-KPVIPVG-QLPTTTGDGDSDAETDT-------WRSIKEWLDE-QEKGSVVYVAFGSEAKPSQEELTEIALG 301 (478)
Q Consensus 233 ~~~~-~~~-~~~~~vG-p~~~~~~~~~~~~~~~~-------~~~~~~~l~~-~~~~~~v~vs~Gs~~~~~~~~~~~~~~a 301 (478)
.+.. ..+ .++..+| |........ ... .+++.+.+.. .+++++|+++.+-...... .+..++++
T Consensus 180 ~l~~~G~~~~ki~vvGn~~~d~~~~~-----~~~~~~~~~~~~~~r~~lg~l~~~~~~vlv~~hR~~~~~~-~~~~ll~A 253 (396)
T 3dzc_A 180 NLLQENYNAENIFVTGNTVIDALLAV-----REKIHTDMDLQATLESQFPMLDASKKLILVTGHRRESFGG-GFERICQA 253 (396)
T ss_dssp HHHHTTCCGGGEEECCCHHHHHHHHH-----HHHHHHCHHHHHHHHHTCTTCCTTSEEEEEECSCBCCCTT-HHHHHHHH
T ss_pred HHHHcCCCcCcEEEECCcHHHHHHHh-----hhhcccchhhHHHHHHHhCccCCCCCEEEEEECCcccchh-HHHHHHHH
Confidence 2222 122 3477788 433111000 000 0223333331 2345677776633232222 24566666
Q ss_pred HHhC-----CCCEEEEEecCCCCCCCCCCCCChhhhhhc-CCCcEEEeccCCh---hhhhcCCCceeeeeccChhhHHHH
Q 011765 302 LELS-----KLPFFWVLKKRLGQADTEPIELPDGFEERT-RGRGVVYTSWAPQ---LAILAHDSVGGFLTHAGWSSVVEA 372 (478)
Q Consensus 302 l~~~-----~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~-~~~n~~~~~~vpq---~~vL~~~~~~~~ItHgG~~s~~ea 372 (478)
++.+ +.++++..+.+ ..+-+.+.+.. ..+++.+.+++++ ..+++.+++ +|+-.| |.+.||
T Consensus 254 ~~~l~~~~~~~~~v~~~g~~--------~~~~~~l~~~~~~~~~v~~~~~lg~~~~~~l~~~ad~--vv~~SG-g~~~EA 322 (396)
T 3dzc_A 254 LITTAEQHPECQILYPVHLN--------PNVREPVNKLLKGVSNIVLIEPQQYLPFVYLMDRAHI--ILTDSG-GIQEEA 322 (396)
T ss_dssp HHHHHHHCTTEEEEEECCBC--------HHHHHHHHHHTTTCTTEEEECCCCHHHHHHHHHHCSE--EEESCS-GGGTTG
T ss_pred HHHHHHhCCCceEEEEeCCC--------hHHHHHHHHHHcCCCCEEEeCCCCHHHHHHHHHhcCE--EEECCc-cHHHHH
Confidence 6432 44555543321 00111111111 2358888777754 457778888 999987 656799
Q ss_pred HHhCCcEeccccccchhhHHHHHhhcCeEEEeeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhcccCChH
Q 011765 373 LQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHD 452 (478)
Q Consensus 373 l~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~ 452 (478)
.++|+|+|+..-..+++ .+.+.|.++.+. .+.++|.+++.++++ |++.++++.+-...+.+++
T Consensus 323 ~a~G~PvV~~~~~~~~~----e~v~~G~~~lv~-------~d~~~l~~ai~~ll~---d~~~~~~m~~~~~~~~~~~--- 385 (396)
T 3dzc_A 323 PSLGKPVLVMRETTERP----EAVAAGTVKLVG-------TNQQQICDALSLLLT---DPQAYQAMSQAHNPYGDGK--- 385 (396)
T ss_dssp GGGTCCEEECCSSCSCH----HHHHHTSEEECT-------TCHHHHHHHHHHHHH---CHHHHHHHHTSCCTTCCSC---
T ss_pred HHcCCCEEEccCCCcch----HHHHcCceEEcC-------CCHHHHHHHHHHHHc---CHHHHHHHhhccCCCcCCh---
Confidence 99999999975555543 245678775543 268999999999999 7887777766555555555
Q ss_pred HHHHHHHHHH
Q 011765 453 RYVDNFLNYL 462 (478)
Q Consensus 453 ~~~~~i~~~~ 462 (478)
+++.|++.+
T Consensus 386 -aa~ri~~~l 394 (396)
T 3dzc_A 386 -ACQRIADIL 394 (396)
T ss_dssp -HHHHHHHHH
T ss_pred -HHHHHHHHH
Confidence 444455444
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* | Back alignment and structure |
|---|
Probab=99.45 E-value=2.9e-11 Score=123.01 Aligned_cols=115 Identities=17% Similarity=0.131 Sum_probs=77.3
Q ss_pred CCcEEEeccCChhh---hhcCC----Cceeeee---ccC-hhhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEee
Q 011765 337 GRGVVYTSWAPQLA---ILAHD----SVGGFLT---HAG-WSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIP 405 (478)
Q Consensus 337 ~~n~~~~~~vpq~~---vL~~~----~~~~~It---HgG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~ 405 (478)
.+++.+..++|+.+ ++..+ ++ +|. +-| -+++.||+++|+|+|+... ......+.+...|..++
T Consensus 334 ~~~V~~~G~v~~~~~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~~----~g~~e~v~~~~~g~l~~ 407 (499)
T 2r60_A 334 RGKVSMFPLNSQQELAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTRN----GGPAEILDGGKYGVLVD 407 (499)
T ss_dssp BTTEEEEECCSHHHHHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEESS----BHHHHHTGGGTSSEEEC
T ss_pred CceEEECCCCCHHHHHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEecC----CCHHHHhcCCceEEEeC
Confidence 35799999998744 66677 77 663 223 3689999999999999653 44555566656788887
Q ss_pred ccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHh-cccCChHHHHHHHHHHHHhcc
Q 011765 406 RDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLF-GDKGRHDRYVDNFLNYLKNHR 466 (478)
Q Consensus 406 ~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~-~~~~~~~~~~~~i~~~~~~~~ 466 (478)
.. +.++++++|.++++ |++.++++.+-+... .+.-+.+..++.+++.+++..
T Consensus 408 ~~------d~~~la~~i~~ll~---~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~~ 460 (499)
T 2r60_A 408 PE------DPEDIARGLLKAFE---SEETWSAYQEKGKQRVEERYTWQETARGYLEVIQEIA 460 (499)
T ss_dssp TT------CHHHHHHHHHHHHS---CHHHHHHHHHHHHHHHHHHSBHHHHHHHHHHHHHHHH
T ss_pred CC------CHHHHHHHHHHHHh---CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 63 78999999999999 666555544333332 222344555566666555443
|
| >1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=3e-12 Score=125.60 Aligned_cols=161 Identities=14% Similarity=0.167 Sum_probs=96.6
Q ss_pred CCceEEEEeCcccCCCHHHHHHHHHHHHh----C-CCCEEEEEecCCCCCCCCCCCCChhhhhhcC-CCcEEEeccCCh-
Q 011765 276 KGSVVYVAFGSEAKPSQEELTEIALGLEL----S-KLPFFWVLKKRLGQADTEPIELPDGFEERTR-GRGVVYTSWAPQ- 348 (478)
Q Consensus 276 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~----~-~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~-~~n~~~~~~vpq- 348 (478)
++++++++.|+..... ..+..++++++. . +.++++..+.+ ...-+.+.+... .+++.+.+++++
T Consensus 204 ~~~~vl~~~gr~~~~~-kg~~~li~a~~~l~~~~~~~~l~i~~g~~--------~~~~~~l~~~~~~~~~v~~~g~~~~~ 274 (384)
T 1vgv_A 204 DKKMILVTGHRRESFG-RGFEEICHALADIATTHQDIQIVYPVHLN--------PNVREPVNRILGHVKNVILIDPQEYL 274 (384)
T ss_dssp TSEEEEEECCCBSSCC-HHHHHHHHHHHHHHHHCTTEEEEEECCBC--------HHHHHHHHHHHTTCTTEEEECCCCHH
T ss_pred CCCEEEEEeCCccccc-hHHHHHHHHHHHHHhhCCCeEEEEEcCCC--------HHHHHHHHHHhhcCCCEEEeCCCCHH
Confidence 3557888888765322 234445555432 2 34444432211 001111222111 358888666665
Q ss_pred --hhhhcCCCceeeeeccChhhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeeccCCCCcccHHHHHHHHHHHh
Q 011765 349 --LAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVL 426 (478)
Q Consensus 349 --~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~~~~~~~~~l~~~i~~ll 426 (478)
.++++.+++ ||+..|. .+.||+++|+|+|+.+...+.. .+.+.|.|..++. +.++|.++|.+++
T Consensus 275 ~~~~~~~~ad~--~v~~Sg~-~~lEA~a~G~PvI~~~~~~~~~----e~v~~g~g~lv~~-------d~~~la~~i~~ll 340 (384)
T 1vgv_A 275 PFVWLMNHAWL--ILTDSGG-IQEEAPSLGKPVLVMRDTTERP----EAVTAGTVRLVGT-------DKQRIVEEVTRLL 340 (384)
T ss_dssp HHHHHHHHCSE--EEESSST-GGGTGGGGTCCEEEESSCCSCH----HHHHHTSEEEECS-------SHHHHHHHHHHHH
T ss_pred HHHHHHHhCcE--EEECCcc-hHHHHHHcCCCEEEccCCCCcc----hhhhCCceEEeCC-------CHHHHHHHHHHHH
Confidence 557788888 9988754 4889999999999998744433 2456688888753 6789999999999
Q ss_pred cccchHHHHHHHHHHHHHhcccCChHHHHHHHHHHH
Q 011765 427 VEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYL 462 (478)
Q Consensus 427 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~ 462 (478)
+ |++.++++.+-++.+.+....++.++.+++.+
T Consensus 341 ~---d~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 373 (384)
T 1vgv_A 341 K---DENEYQAMSRAHNPYGDGQACSRILEALKNNR 373 (384)
T ss_dssp H---CHHHHHHHHSSCCTTCCSCHHHHHHHHHHHTC
T ss_pred h---ChHHHhhhhhccCCCcCCCHHHHHHHHHHHHH
Confidence 9 77766655544333434443344444444433
|
| >3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.39 E-value=1.3e-12 Score=128.87 Aligned_cols=110 Identities=16% Similarity=0.162 Sum_probs=81.2
Q ss_pred CCcEEEeccCCh---hhhhcCCCceeeeeccChhhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeeccCCCCcc
Q 011765 337 GRGVVYTSWAPQ---LAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFF 413 (478)
Q Consensus 337 ~~n~~~~~~vpq---~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~~~~~ 413 (478)
.+++.+.+++++ ..+++.+++ +|+-.|..+ .||.++|+|+|++|-..+++. +.+.|.|+.+. .
T Consensus 281 ~~~v~l~~~l~~~~~~~l~~~ad~--vv~~SGg~~-~EA~a~g~PvV~~~~~~~~~e----~v~~g~~~lv~-------~ 346 (403)
T 3ot5_A 281 HERIHLIEPLDAIDFHNFLRKSYL--VFTDSGGVQ-EEAPGMGVPVLVLRDTTERPE----GIEAGTLKLIG-------T 346 (403)
T ss_dssp CTTEEEECCCCHHHHHHHHHHEEE--EEECCHHHH-HHGGGTTCCEEECCSSCSCHH----HHHHTSEEECC-------S
T ss_pred CCCEEEeCCCCHHHHHHHHHhcCE--EEECCccHH-HHHHHhCCCEEEecCCCcchh----heeCCcEEEcC-------C
Confidence 358988898874 456777777 998875322 699999999999976555554 34678777664 2
Q ss_pred cHHHHHHHHHHHhcccchHHHHHHHHHHHHHhcccCChHHHHHHHHHHHH
Q 011765 414 TRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLK 463 (478)
Q Consensus 414 ~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~~ 463 (478)
+.++|.+++.++++ |++.++++.+-...+.+++.+++.++.+.+.+.
T Consensus 347 d~~~l~~ai~~ll~---~~~~~~~m~~~~~~~g~~~aa~rI~~~l~~~l~ 393 (403)
T 3ot5_A 347 NKENLIKEALDLLD---NKESHDKMAQAANPYGDGFAANRILAAIKSHFE 393 (403)
T ss_dssp CHHHHHHHHHHHHH---CHHHHHHHHHSCCTTCCSCHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHc---CHHHHHHHHhhcCcccCCcHHHHHHHHHHHHhC
Confidence 78999999999999 788877776655556667766677776666654
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* | Back alignment and structure |
|---|
Probab=99.37 E-value=3.6e-10 Score=110.14 Aligned_cols=161 Identities=16% Similarity=0.196 Sum_probs=98.9
Q ss_pred CceEEEEeCcccCCCHHHHHHHHHHHHhCCC----CE-EEEEecCCCCCCCCCCCCChhhhhh---cC-CCcEEEeccCC
Q 011765 277 GSVVYVAFGSEAKPSQEELTEIALGLELSKL----PF-FWVLKKRLGQADTEPIELPDGFEER---TR-GRGVVYTSWAP 347 (478)
Q Consensus 277 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~----~~-i~~~~~~~~~~~~~~~~~p~~~~~~---~~-~~n~~~~~~vp 347 (478)
++.+++..|+... ...+..++++++.... .+ ++.++.+ . .+.+.+. .. .+++.+..+..
T Consensus 195 ~~~~i~~~G~~~~--~K~~~~li~a~~~l~~~~~~~~~l~i~G~g------~----~~~~~~~~~~~~~~~~v~~~g~~~ 262 (374)
T 2iw1_A 195 QQNLLLQVGSDFG--RKGVDRSIEALASLPESLRHNTLLFVVGQD------K----PRKFEALAEKLGVRSNVHFFSGRN 262 (374)
T ss_dssp TCEEEEEECSCTT--TTTHHHHHHHHHTSCHHHHHTEEEEEESSS------C----CHHHHHHHHHHTCGGGEEEESCCS
T ss_pred CCeEEEEeccchh--hcCHHHHHHHHHHhHhccCCceEEEEEcCC------C----HHHHHHHHHHcCCCCcEEECCCcc
Confidence 3467777887653 3445556666655432 23 3333321 1 1222221 11 35788888765
Q ss_pred h-hhhhcCCCceeeee----ccChhhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeeccCCCCcccHHHHHHHH
Q 011765 348 Q-LAILAHDSVGGFLT----HAGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESL 422 (478)
Q Consensus 348 q-~~vL~~~~~~~~It----HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~~~~~~~~~l~~~i 422 (478)
+ .+++..+++ +|. -|..+++.||+++|+|+|+.+. ..+...+++.+.|..++.. -+.+++.++|
T Consensus 263 ~~~~~~~~ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i~~~~~g~~~~~~-----~~~~~l~~~i 331 (374)
T 2iw1_A 263 DVSELMAAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAV----CGYAHYIADANCGTVIAEP-----FSQEQLNEVL 331 (374)
T ss_dssp CHHHHHHHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETT----STTTHHHHHHTCEEEECSS-----CCHHHHHHHH
T ss_pred cHHHHHHhcCE--EEeccccCCcccHHHHHHHCCCCEEEecC----CCchhhhccCCceEEeCCC-----CCHHHHHHHH
Confidence 5 557888888 664 4566899999999999999654 4556677778899998743 3899999999
Q ss_pred HHHhcccchHHHHHHHHHHHHHhcccCChHHHHHHHHHHHH
Q 011765 423 RLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLK 463 (478)
Q Consensus 423 ~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~~ 463 (478)
.++++ |++.++++.+-+......-......+.+.+.++
T Consensus 332 ~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 369 (374)
T 2iw1_A 332 RKALT---QSPLRMAWAENARHYADTQDLYSLPEKAADIIT 369 (374)
T ss_dssp HHHHH---CHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHH
T ss_pred HHHHc---ChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 99998 666555444443333222222234444444444
|
| >3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A | Back alignment and structure |
|---|
Probab=99.32 E-value=3.7e-11 Score=117.40 Aligned_cols=163 Identities=14% Similarity=0.128 Sum_probs=94.8
Q ss_pred CCceEEEEeCcccCCCHHHHHHHHHHHHhC---CCCEEEEEecCCCCCCCCCCCCChhhhhhcC-CCcEEEeccCCh---
Q 011765 276 KGSVVYVAFGSEAKPSQEELTEIALGLELS---KLPFFWVLKKRLGQADTEPIELPDGFEERTR-GRGVVYTSWAPQ--- 348 (478)
Q Consensus 276 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~---~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~-~~n~~~~~~vpq--- 348 (478)
++++++++.|...... ..+..++++++.. ...+.+++..+ ....+-+.+.+... .+++.+.+++++
T Consensus 204 ~~~~vl~~~gr~~~~~-K~~~~li~a~~~l~~~~~~~~~i~~~g------~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~ 276 (375)
T 3beo_A 204 NNRLVLMTAHRRENLG-EPMRNMFRAIKRLVDKHEDVQVVYPVH------MNPVVRETANDILGDYGRIHLIEPLDVIDF 276 (375)
T ss_dssp TSEEEEEECCCGGGTT-HHHHHHHHHHHHHHHHCTTEEEEEECC------SCHHHHHHHHHHHTTCTTEEEECCCCHHHH
T ss_pred CCCeEEEEecccccch-hHHHHHHHHHHHHHhhCCCeEEEEeCC------CCHHHHHHHHHHhhccCCEEEeCCCCHHHH
Confidence 3457777888755321 3345556665432 11233333321 00001111111112 258888777765
Q ss_pred hhhhcCCCceeeeeccChhhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeeccCCCCcccHHHHHHHHHHHhcc
Q 011765 349 LAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLVE 428 (478)
Q Consensus 349 ~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~ 428 (478)
.++++.+++ ||+..| +.+.||+++|+|+|+.+..... ..+.+.|.|..++. +.++|+++|.++++
T Consensus 277 ~~~~~~ad~--~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~----~e~v~~g~g~~v~~-------d~~~la~~i~~ll~- 341 (375)
T 3beo_A 277 HNVAARSYL--MLTDSG-GVQEEAPSLGVPVLVLRDTTER----PEGIEAGTLKLAGT-------DEETIFSLADELLS- 341 (375)
T ss_dssp HHHHHTCSE--EEECCH-HHHHHHHHHTCCEEECSSCCSC----HHHHHTTSEEECCS-------CHHHHHHHHHHHHH-
T ss_pred HHHHHhCcE--EEECCC-ChHHHHHhcCCCEEEecCCCCC----ceeecCCceEEcCC-------CHHHHHHHHHHHHh-
Confidence 457777888 888763 4588999999999998543332 22456678887752 67999999999999
Q ss_pred cchHHHHHHHHHHHHHhcccCChHHHHHHHHHHH
Q 011765 429 EKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYL 462 (478)
Q Consensus 429 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~ 462 (478)
|++.++++.+-+..+.+....++.++.+++.+
T Consensus 342 --~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 373 (375)
T 3beo_A 342 --DKEAHDKMSKASNPYGDGRASERIVEAILKHF 373 (375)
T ss_dssp --CHHHHHHHCCCCCTTCCSCHHHHHHHHHHHHT
T ss_pred --ChHhHhhhhhcCCCCCCCcHHHHHHHHHHHHh
Confidence 77766655443333334443445555555443
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* | Back alignment and structure |
|---|
Probab=99.25 E-value=1.5e-10 Score=111.55 Aligned_cols=150 Identities=13% Similarity=0.080 Sum_probs=92.1
Q ss_pred EEEEeCcccCCCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCCCCChh---hhhhcCCCcEEEeccCChh---hhhc
Q 011765 280 VYVAFGSEAKPSQEELTEIALGLELSKLPFFWVLKKRLGQADTEPIELPDG---FEERTRGRGVVYTSWAPQL---AILA 353 (478)
Q Consensus 280 v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~---~~~~~~~~n~~~~~~vpq~---~vL~ 353 (478)
+++..|+.. ....+..++++++..+.+++++-.+. ..+. +.++.. +++.+..|+++. +++.
T Consensus 164 ~i~~vG~~~--~~Kg~~~li~a~~~~~~~l~i~G~g~----------~~~~l~~~~~~~~-~~v~~~g~~~~~~l~~~~~ 230 (342)
T 2iuy_A 164 FLLFMGRVS--PHKGALEAAAFAHACGRRLVLAGPAW----------EPEYFDEITRRYG-STVEPIGEVGGERRLDLLA 230 (342)
T ss_dssp CEEEESCCC--GGGTHHHHHHHHHHHTCCEEEESCCC----------CHHHHHHHHHHHT-TTEEECCCCCHHHHHHHHH
T ss_pred EEEEEeccc--cccCHHHHHHHHHhcCcEEEEEeCcc----------cHHHHHHHHHHhC-CCEEEeccCCHHHHHHHHH
Confidence 455567765 34556667777766677766553221 1111 222223 689999999985 5777
Q ss_pred CCCceeee--ec-----------cCh-hhHHHHHHhCCcEeccccccchhhHHHHHhh--cCeEEEeeccCCCCcccHHH
Q 011765 354 HDSVGGFL--TH-----------AGW-SSVVEALQFGMPLIVLTCYADQGLNAKLLEE--KQIVELIPRDEGDGFFTRNS 417 (478)
Q Consensus 354 ~~~~~~~I--tH-----------gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~--~g~G~~l~~~~~~~~~~~~~ 417 (478)
.+++ +| +. -|. +++.||+++|+|+|+... ......+++ .+.|...+. +.++
T Consensus 231 ~adv--~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~----~~~~e~~~~~~~~~g~~~~~-------d~~~ 297 (342)
T 2iuy_A 231 SAHA--VLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGN----GCLAEIVPSVGEVVGYGTDF-------APDE 297 (342)
T ss_dssp HCSE--EEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCT----TTHHHHGGGGEEECCSSSCC-------CHHH
T ss_pred hCCE--EEECCcccccccccccccCccHHHHHHHhcCCCEEEcCC----CChHHHhcccCCCceEEcCC-------CHHH
Confidence 8888 55 32 343 689999999999999765 446666666 445555432 5788
Q ss_pred HHHHHHHHhcccchHHHHHHHHHHH-HHhcccCChHHHHHHHHHHHHhcc
Q 011765 418 VAESLRLVLVEEKGQIYRDKAKEMK-GLFGDKGRHDRYVDNFLNYLKNHR 466 (478)
Q Consensus 418 l~~~i~~ll~~~~~~~~~~~a~~~~-~~~~~~~~~~~~~~~i~~~~~~~~ 466 (478)
++++|.++++ .+++++.. +.+ ..++.++.+++.+++..
T Consensus 298 l~~~i~~l~~-------~~~~~~~~~~~~----s~~~~~~~~~~~~~~~~ 336 (342)
T 2iuy_A 298 ARRTLAGLPA-------SDEVRRAAVRLW----GHVTIAERYVEQYRRLL 336 (342)
T ss_dssp HHHHHHTSCC-------HHHHHHHHHHHH----BHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-------HHHHHHHHHHhc----CHHHHHHHHHHHHHHHH
Confidence 9999998887 22333322 333 23345566666655443
|
| >4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii} | Back alignment and structure |
|---|
Probab=99.17 E-value=3.2e-10 Score=110.77 Aligned_cols=347 Identities=13% Similarity=0.119 Sum_probs=184.1
Q ss_pred ccEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCccc-cCCCCCCCCCCCeEEEEecCCCCC-CCCCCccccCCC
Q 011765 6 KLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNID-RLPRLPQNLASMIQFVKISLPHVD-NLRENAEATIDL 83 (478)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~-~~~~~g~~~~~~i~~~~i~~~~~~-~l~~~~~~~~~~ 83 (478)
++|++++ .++.--+.-+..|.++|.++ .++.++.+....+ .+.+ +.|..+..+..+ .+..+ ...
T Consensus 9 ~~~~~~v-~GtRpe~~k~~p~~~~l~~~-~~~~~~~tgqh~~~~~~~--------~~~~~~~i~~~~~~l~~~---~~~- 74 (385)
T 4hwg_A 9 MLKVMTI-VGTRPELIKLCCVISEFDKH-TKHILVHTGQNYAYELNQ--------VFFDDMGIRKPDYFLEVA---ADN- 74 (385)
T ss_dssp CCEEEEE-ECSHHHHHHHHHHHHHHHHH-SEEEEEECSCHHHHHHTH--------HHHC-CCCCCCSEECCCC---CCC-
T ss_pred hhheeEE-EEcCHhHHHHHHHHHHHHhc-CCEEEEEeCCCCChhHHH--------HHHhhCCCCCCceecCCC---CCC-
Confidence 4566554 45666666777778888777 9988888887654 2222 111111111001 11111 011
Q ss_pred ChhHHHHHHHHHhhhhHHHHHHHhhcCCCEEEE--cCCcccHHHHHHHhCCCeEEEecchHHHHHhhccccccccccCCC
Q 011765 84 PYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLF--DFAAYWLPARARELGIPSGFFSIFTAATLGYFGPSSVLINDSGDH 161 (478)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~--D~~~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (478)
. ..........+.+++++.+||+|+. |....++..+|.++|||++.+.... ..
T Consensus 75 ---~----~~~~~~~~~~l~~~l~~~kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~eagl-rs----------------- 129 (385)
T 4hwg_A 75 ---T----AKSIGLVIEKVDEVLEKEKPDAVLFYGDTNSCLSAIAAKRRKIPIFHMEAGN-RC----------------- 129 (385)
T ss_dssp ---S----HHHHHHHHHHHHHHHHHHCCSEEEEESCSGGGGGHHHHHHTTCCEEEESCCC-CC-----------------
T ss_pred ---H----HHHHHHHHHHHHHHHHhcCCcEEEEECCchHHHHHHHHHHhCCCEEEEeCCC-cc-----------------
Confidence 1 2222334457778888999999986 3344455889999999976552200 00
Q ss_pred CCCCCcccCCCcccccccccccchhhhhhhhhhhcCCcccchhhhhhhccccCCcEEEEcCcCccChHHHHHHH-hhcC-
Q 011765 162 LKTPEDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLE-QLHR- 239 (478)
Q Consensus 162 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~~-~~~~- 239 (478)
. ....|. . . .+.+. -+.++.++..+ ....+.+. ...+
T Consensus 130 ------~---~~~~pe---------e---~-------------nR~~~--~~~a~~~~~~t-----e~~~~~l~~~G~~~ 168 (385)
T 4hwg_A 130 ------F---DQRVPE---------E---I-------------NRKII--DHISDVNITLT-----EHARRYLIAEGLPA 168 (385)
T ss_dssp ------S---CTTSTH---------H---H-------------HHHHH--HHHCSEEEESS-----HHHHHHHHHTTCCG
T ss_pred ------c---cccCcH---------H---H-------------HHHHH--HhhhceeecCC-----HHHHHHHHHcCCCc
Confidence 0 000010 0 0 00000 11234455544 22222221 1222
Q ss_pred CCeeeec-cCCCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccCCC-HHHHHHHHHHHHhC----CCCEEEEE
Q 011765 240 KPVIPVG-QLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPS-QEELTEIALGLELS----KLPFFWVL 313 (478)
Q Consensus 240 ~~~~~vG-p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~-~~~~~~~~~al~~~----~~~~i~~~ 313 (478)
.++..+| |......... .....+++.+.++-.+ ++.|+++.|...+.+ .+.+..+++++..+ +..+++..
T Consensus 169 ~~I~vtGnp~~D~~~~~~---~~~~~~~~~~~lgl~~-~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~ 244 (385)
T 4hwg_A 169 ELTFKSGSHMPEVLDRFM---PKILKSDILDKLSLTP-KQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFST 244 (385)
T ss_dssp GGEEECCCSHHHHHHHHH---HHHHHCCHHHHTTCCT-TSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEE
T ss_pred CcEEEECCchHHHHHHhh---hhcchhHHHHHcCCCc-CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEEC
Confidence 2477777 3321100000 0001122333343322 568888888765433 25566777776543 56666654
Q ss_pred ecCCCCCCCCCCCCChhhhhh---c-CCCcEEEeccCCh---hhhhcCCCceeeeeccChhhHHHHHHhCCcEecccccc
Q 011765 314 KKRLGQADTEPIELPDGFEER---T-RGRGVVYTSWAPQ---LAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYA 386 (478)
Q Consensus 314 ~~~~~~~~~~~~~~p~~~~~~---~-~~~n~~~~~~vpq---~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~ 386 (478)
... +-..+.+. . ..+++.+.+.+++ ..+++.+++ +||-.|. .+.||.+.|+|+|+++...
T Consensus 245 ~p~----------~~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adl--vvt~SGg-v~~EA~alG~Pvv~~~~~t 311 (385)
T 4hwg_A 245 HPR----------TKKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFC--ILSDSGT-ITEEASILNLPALNIREAH 311 (385)
T ss_dssp CHH----------HHHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCSE--EEECCTT-HHHHHHHTTCCEEECSSSC
T ss_pred ChH----------HHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcE--EEECCcc-HHHHHHHcCCCEEEcCCCc
Confidence 321 00111111 1 1247887666654 467888888 9998775 4699999999999998755
Q ss_pred chhhHHHHHhhcCeEEEeeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHh-cccCChHHHHHHHHHHHH
Q 011765 387 DQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLF-GDKGRHDRYVDNFLNYLK 463 (478)
Q Consensus 387 DQ~~na~~v~~~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~-~~~~~~~~~~~~i~~~~~ 463 (478)
+-+. ..+.|.++.+. .+.+.|.+++.++++ |+..++++..-...+ .+++.+++.++.+.+++.
T Consensus 312 er~e----~v~~G~~~lv~-------~d~~~i~~ai~~ll~---d~~~~~~m~~~~~~~~g~g~aa~rI~~~l~~~~~ 375 (385)
T 4hwg_A 312 ERPE----GMDAGTLIMSG-------FKAERVLQAVKTITE---EHDNNKRTQGLVPDYNEAGLVSKKILRIVLSYVD 375 (385)
T ss_dssp SCTH----HHHHTCCEECC-------SSHHHHHHHHHHHHT---TCBTTBCCSCCCHHHHTCCCHHHHHHHHHHHHHH
T ss_pred cchh----hhhcCceEEcC-------CCHHHHHHHHHHHHh---ChHHHHHhhccCCCCCCCChHHHHHHHHHHHHhh
Confidence 4222 25668776553 378999999999999 544443333333346 777877777777776654
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* | Back alignment and structure |
|---|
Probab=99.16 E-value=3.9e-09 Score=104.53 Aligned_cols=112 Identities=15% Similarity=0.043 Sum_probs=77.0
Q ss_pred CCcEEEeccCC---h---hhhhcCCCceeeeecc----ChhhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeec
Q 011765 337 GRGVVYTSWAP---Q---LAILAHDSVGGFLTHA----GWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPR 406 (478)
Q Consensus 337 ~~n~~~~~~vp---q---~~vL~~~~~~~~ItHg----G~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~ 406 (478)
.+++.+..|++ + .+++..+++ +|.-. .-+++.||+++|+|+|+.+. ..+...+.+.+.|...+
T Consensus 292 ~~~V~~~G~~~~~~~~~~~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i~~~~~g~l~~- 364 (416)
T 2x6q_A 292 DYDVKVLTNLIGVHAREVNAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQIVDGETGFLVR- 364 (416)
T ss_dssp CTTEEEEEGGGTCCHHHHHHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHCCBTTTEEEES-
T ss_pred CCcEEEecccCCCCHHHHHHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhheecCCCeEEEC-
Confidence 45888888775 2 446777887 66433 34789999999999999664 45666666667788774
Q ss_pred cCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHH-hcccCChHHHHHHHHHHHHhc
Q 011765 407 DEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGL-FGDKGRHDRYVDNFLNYLKNH 465 (478)
Q Consensus 407 ~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~-~~~~~~~~~~~~~i~~~~~~~ 465 (478)
+.++++++|.++++ |++.++++.+-+.. ..+.-+.+..++.+++.+++.
T Consensus 365 -------d~~~la~~i~~ll~---~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~l 414 (416)
T 2x6q_A 365 -------DANEAVEVVLYLLK---HPEVSKEMGAKAKERVRKNFIITKHMERYLDILNSL 414 (416)
T ss_dssp -------SHHHHHHHHHHHHH---CHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHTC
T ss_pred -------CHHHHHHHHHHHHh---CHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHh
Confidence 46789999999999 66665554443333 323344566777777777643
|
| >1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A | Back alignment and structure |
|---|
Probab=99.15 E-value=5.5e-09 Score=105.70 Aligned_cols=168 Identities=7% Similarity=-0.009 Sum_probs=98.7
Q ss_pred eEEEEeCcccC-CCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCCCCChhhhhhc--CCCcEE-EeccCCh--hhhh
Q 011765 279 VVYVAFGSEAK-PSQEELTEIALGLELSKLPFFWVLKKRLGQADTEPIELPDGFEERT--RGRGVV-YTSWAPQ--LAIL 352 (478)
Q Consensus 279 ~v~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~--~~~n~~-~~~~vpq--~~vL 352 (478)
.+++..|+... ...+.+.+.+..+.+.+.+++++-.+. ...-+.+.+.. ..+++. +..+... ..++
T Consensus 292 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~--------~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~ 363 (485)
T 1rzu_A 292 PLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGD--------VALEGALLAAASRHHGRVGVAIGYNEPLSHLMQ 363 (485)
T ss_dssp CEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEEECBC--------HHHHHHHHHHHHHTTTTEEEEESCCHHHHHHHH
T ss_pred eEEEEEccCccccCHHHHHHHHHHHHhcCceEEEEeCCc--------hHHHHHHHHHHHhCCCcEEEecCCCHHHHHHHH
Confidence 57778888774 223444444444444456655553321 00111111111 125776 5677333 2567
Q ss_pred cCCCceeeee----ccChhhHHHHHHhCCcEeccccccchhhHHHHHhhc---------CeEEEeeccCCCCcccHHHHH
Q 011765 353 AHDSVGGFLT----HAGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEK---------QIVELIPRDEGDGFFTRNSVA 419 (478)
Q Consensus 353 ~~~~~~~~It----HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~---------g~G~~l~~~~~~~~~~~~~l~ 419 (478)
..+++ +|. -|.-.++.||+++|+|+|+... ......+.+. +.|..++.. +.++++
T Consensus 364 ~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v~~~~~~~~~~~~~~G~l~~~~------d~~~la 431 (485)
T 1rzu_A 364 AGCDA--IIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTVIDANHAALASKAATGVQFSPV------TLDGLK 431 (485)
T ss_dssp HHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCBCCHHHHHTTCCCBEEESSC------SHHHHH
T ss_pred hcCCE--EEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhheecccccccccccCCcceEeCCC------CHHHHH
Confidence 78888 662 2334689999999999999654 3455555544 678887653 789999
Q ss_pred HHHHHHh---cccchHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHhccccCCC
Q 011765 420 ESLRLVL---VEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLKNHRCLRKG 471 (478)
Q Consensus 420 ~~i~~ll---~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 471 (478)
++|.+++ + |++.++++.+-+. .+.-+-+..++.+++.+++.....+.
T Consensus 432 ~~i~~ll~~~~---~~~~~~~~~~~~~--~~~fs~~~~~~~~~~~y~~~~~~~~~ 481 (485)
T 1rzu_A 432 QAIRRTVRYYH---DPKLWTQMQKLGM--KSDVSWEKSAGLYAALYSQLISKGHH 481 (485)
T ss_dssp HHHHHHHHHHT---CHHHHHHHHHHHH--TCCCBHHHHHHHHHHHHHHHTC----
T ss_pred HHHHHHHHHhC---CHHHHHHHHHHHH--HHhCChHHHHHHHHHHHHHhhCCCCC
Confidence 9999999 6 6666555544332 23444567778888888766654443
|
| >2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A | Back alignment and structure |
|---|
Probab=99.10 E-value=3e-08 Score=100.22 Aligned_cols=168 Identities=10% Similarity=0.007 Sum_probs=98.0
Q ss_pred ceEEEEeCcccC-CCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCCCCChhhhhhc--CCCcEE-EeccCCh--hhh
Q 011765 278 SVVYVAFGSEAK-PSQEELTEIALGLELSKLPFFWVLKKRLGQADTEPIELPDGFEERT--RGRGVV-YTSWAPQ--LAI 351 (478)
Q Consensus 278 ~~v~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~--~~~n~~-~~~~vpq--~~v 351 (478)
..+++..|+... .+.+.+.+.+..+.+.+.+++++-.+. ...-+.+.+.. ..+++. +..+... .++
T Consensus 292 ~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~--------~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~ 363 (485)
T 2qzs_A 292 VPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGD--------PVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRI 363 (485)
T ss_dssp SCEEEEEEEESGGGCHHHHHHHHHHHHHTTCEEEEEEEEC--------HHHHHHHHHHHHHSTTTEEEEESCCHHHHHHH
T ss_pred CeEEEEeccCccccCHHHHHHHHHHHhhCCcEEEEEeCCc--------hHHHHHHHHHHHhCCCcEEEeCCCCHHHHHHH
Confidence 366677787653 223444444444433456655554321 00111111111 125675 6677333 257
Q ss_pred hcCCCceeeee----ccChhhHHHHHHhCCcEeccccccchhhHHHHHhhc---------CeEEEeeccCCCCcccHHHH
Q 011765 352 LAHDSVGGFLT----HAGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEK---------QIVELIPRDEGDGFFTRNSV 418 (478)
Q Consensus 352 L~~~~~~~~It----HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~---------g~G~~l~~~~~~~~~~~~~l 418 (478)
++.+++ +|. -|.-+++.||+++|+|+|+... ......+.+. +.|..++.. +.+++
T Consensus 364 ~~~adv--~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v~~~~~~~~~~~~~~G~l~~~~------d~~~l 431 (485)
T 2qzs_A 364 MGGADV--ILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTVSDCSLENLADGVASGFVFEDS------NAWSL 431 (485)
T ss_dssp HHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCBCCHHHHHTTCCCBEEECSS------SHHHH
T ss_pred HHhCCE--EEECCccCCCcHHHHHHHHCCCCEEECCC----CCccceeccCccccccccccceEEECCC------CHHHH
Confidence 788888 662 2334689999999999999654 3455555544 578888754 78999
Q ss_pred HHHHHHHh---cccchHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHhccccCC
Q 011765 419 AESLRLVL---VEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLKNHRCLRK 470 (478)
Q Consensus 419 ~~~i~~ll---~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 470 (478)
+++|.+++ + |++.++++.+-+.. +.-+-+..++.+++.+++.....+
T Consensus 432 a~~i~~ll~~~~---~~~~~~~~~~~~~~--~~fs~~~~~~~~~~ly~~~~~~~~ 481 (485)
T 2qzs_A 432 LRAIRRAFVLWS---RPSLWRFVQRQAMA--MDFSWQVAAKSYRELYYRLKLEHH 481 (485)
T ss_dssp HHHHHHHHHHHT---SHHHHHHHHHHHHH--CCCCHHHHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHcC---CHHHHHHHHHHHHh--hcCCHHHHHHHHHHHHHHhhhhhc
Confidence 99999999 6 66666555443322 344456777888888877665443
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* | Back alignment and structure |
|---|
Probab=99.08 E-value=2.7e-08 Score=98.34 Aligned_cols=114 Identities=11% Similarity=0.097 Sum_probs=76.5
Q ss_pred EEEeccCChh---hhhcCCCceeeee----ccChhhHHHHHHhCCcEeccccccchhhHHHHHhhcCe------------
Q 011765 340 VVYTSWAPQL---AILAHDSVGGFLT----HAGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQI------------ 400 (478)
Q Consensus 340 ~~~~~~vpq~---~vL~~~~~~~~It----HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~------------ 400 (478)
+.+..|+++. +++..+++ +|. -|.-.++.||+++|+|+|+... ......+.+...
T Consensus 256 v~~~g~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----~g~~e~v~~~~~~~i~~~~~~~~~ 329 (413)
T 3oy2_A 256 MINRTVLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISAV----GGADDYFSGDCVYKIKPSAWISVD 329 (413)
T ss_dssp EEECSCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEECC----HHHHHHSCTTTSEEECCCEEEECT
T ss_pred eeccCcCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcCC----CChHHHHccCcccccccccccccc
Confidence 6777899864 46777887 662 2334689999999999999553 344444443322
Q ss_pred ---EE--EeeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhc-ccCChHHHHHHHHHHHHhccccC
Q 011765 401 ---VE--LIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFG-DKGRHDRYVDNFLNYLKNHRCLR 469 (478)
Q Consensus 401 ---G~--~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~ 469 (478)
|. .++.. +.++++++| ++++ |++.++++.+-+.... +.-.-+..++.+++.+++...++
T Consensus 330 ~~~G~~gl~~~~------d~~~la~~i-~l~~---~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~~ 394 (413)
T 3oy2_A 330 DRDGIGGIEGII------DVDDLVEAF-TFFK---DEKNRKEYGKRVQDFVKTKPTWDDISSDIIDFFNSLLRVE 394 (413)
T ss_dssp TTCSSCCEEEEC------CHHHHHHHH-HHTT---SHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHTC--
T ss_pred cccCcceeeCCC------CHHHHHHHH-HHhc---CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhc
Confidence 55 55543 899999999 9999 7777666665555543 44456777788888887665433
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* | Back alignment and structure |
|---|
Probab=98.99 E-value=1.1e-07 Score=100.76 Aligned_cols=113 Identities=16% Similarity=0.070 Sum_probs=73.0
Q ss_pred CCcEEEeccC----Chhhhhc----CCCceeeeec----cChhhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEe
Q 011765 337 GRGVVYTSWA----PQLAILA----HDSVGGFLTH----AGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELI 404 (478)
Q Consensus 337 ~~n~~~~~~v----pq~~vL~----~~~~~~~ItH----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l 404 (478)
.+++.+..+. ++.++.. .+++ ||.- |--.++.||+++|+|+|+. |-......+.+.+.|..+
T Consensus 639 ~~~V~flG~~~~~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIas----d~GG~~EiV~dg~~Gllv 712 (816)
T 3s28_A 639 NGQFRWISSQMDRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVHGKSGFHI 712 (816)
T ss_dssp BBBEEEECCCCCHHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEE----SSBTHHHHCCBTTTBEEE
T ss_pred CCcEEEccCccccCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEe----CCCChHHHHccCCcEEEe
Confidence 3578877744 4444443 4556 6632 2346999999999999995 555566666666788888
Q ss_pred eccCCCCcccHHHHHHHHHHHh----cccchHHHHHHHHHHHHHhc-ccCChHHHHHHHHHHHHh
Q 011765 405 PRDEGDGFFTRNSVAESLRLVL----VEEKGQIYRDKAKEMKGLFG-DKGRHDRYVDNFLNYLKN 464 (478)
Q Consensus 405 ~~~~~~~~~~~~~l~~~i~~ll----~~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~i~~~~~~ 464 (478)
+.. +.++++++|.+++ . |++.++++.+-+.... +.-+-+..++.+++.++.
T Consensus 713 ~p~------D~e~LA~aI~~lL~~Ll~---d~~~~~~m~~~ar~~a~~~fSwe~~a~~ll~lY~~ 768 (816)
T 3s28_A 713 DPY------HGDQAADTLADFFTKCKE---DPSHWDEISKGGLQRIEEKYTWQIYSQRLLTLTGV 768 (816)
T ss_dssp CTT------SHHHHHHHHHHHHHHHHH---CTHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHH
T ss_pred CCC------CHHHHHHHHHHHHHHhcc---CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 764 7889999997776 6 5665555544444433 333445566666665543
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=98.74 E-value=3.6e-06 Score=86.69 Aligned_cols=117 Identities=14% Similarity=0.143 Sum_probs=79.3
Q ss_pred CcEEEeccCChh---hhhcCCCceeee--e-ccChhhHHHHHHhCCcEecccccc-chhhHHHHHhhcCeEEEeeccCCC
Q 011765 338 RGVVYTSWAPQL---AILAHDSVGGFL--T-HAGWSSVVEALQFGMPLIVLTCYA-DQGLNAKLLEEKQIVELIPRDEGD 410 (478)
Q Consensus 338 ~n~~~~~~vpq~---~vL~~~~~~~~I--t-HgG~~s~~eal~~GvP~l~~P~~~-DQ~~na~~v~~~g~G~~l~~~~~~ 410 (478)
+++++..++++. .++..+++ || + .|+.+++.||+++|+|+|+.|-.. --..-+..+...|+...+..
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~g~~e~v~~---- 507 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLNHHLGLDEMNVA---- 507 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHHHTCGGGBCS----
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHHCCChhhhcC----
Confidence 689999999854 46777887 76 2 256689999999999999976321 11122455666677655432
Q ss_pred CcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhc---ccCChHHHHHHHHHHHHhcc
Q 011765 411 GFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFG---DKGRHDRYVDNFLNYLKNHR 466 (478)
Q Consensus 411 ~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~---~~~~~~~~~~~i~~~~~~~~ 466 (478)
+.+++.+++.++++ |++.++++.+-..... +.-..+..++.+++.+++..
T Consensus 508 ---~~~~la~~i~~l~~---~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~y~~~~ 560 (568)
T 2vsy_A 508 ---DDAAFVAKAVALAS---DPAALTALHARVDVLRRASGVFHMDGFADDFGALLQALA 560 (568)
T ss_dssp ---SHHHHHHHHHHHHH---CHHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHH
T ss_pred ---CHHHHHHHHHHHhc---CHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHH
Confidence 78999999999999 7777666654443332 44445666777777666543
|
| >2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* | Back alignment and structure |
|---|
Probab=98.73 E-value=9.2e-07 Score=87.15 Aligned_cols=72 Identities=11% Similarity=0.134 Sum_probs=55.6
Q ss_pred CcEEEeccCChhh---hhcCCCceeeee---ccCh-hhHHHHH-------HhCCcEeccccccchhhHHHHHhhcCeEEE
Q 011765 338 RGVVYTSWAPQLA---ILAHDSVGGFLT---HAGW-SSVVEAL-------QFGMPLIVLTCYADQGLNAKLLEEKQIVEL 403 (478)
Q Consensus 338 ~n~~~~~~vpq~~---vL~~~~~~~~It---HgG~-~s~~eal-------~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~ 403 (478)
+++.+..++|+.+ ++..+++ +|. +-|. +++.||+ ++|+|+|+... +.+...|..
T Consensus 265 ~~V~f~G~~~~~~l~~~~~~adv--~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~~~~G~l 332 (406)
T 2hy7_A 265 DNVIVYGEMKHAQTIGYIKHARF--GIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVGPYKSRF 332 (406)
T ss_dssp TTEEEECCCCHHHHHHHHHTCSE--EECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTCSCSSEE
T ss_pred CCEEEcCCCCHHHHHHHHHhcCE--EEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------cccCcceEE
Confidence 4899999998754 6777888 652 3344 6789999 99999999765 555556776
Q ss_pred -eeccCCCCcccHHHHHHHHHHHhc
Q 011765 404 -IPRDEGDGFFTRNSVAESLRLVLV 427 (478)
Q Consensus 404 -l~~~~~~~~~~~~~l~~~i~~ll~ 427 (478)
++.. +.++|+++|.++++
T Consensus 333 ~v~~~------d~~~la~ai~~ll~ 351 (406)
T 2hy7_A 333 GYTPG------NADSVIAAITQALE 351 (406)
T ss_dssp EECTT------CHHHHHHHHHHHHH
T ss_pred EeCCC------CHHHHHHHHHHHHh
Confidence 6553 88999999999998
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=98.61 E-value=2.8e-07 Score=79.53 Aligned_cols=141 Identities=9% Similarity=0.057 Sum_probs=91.5
Q ss_pred eEEEEeCcccCCCHHHHHHHHHHHHhC-CCCEEEEEecCCCCCCCCCCCCChhhh--hhcCCCcEEEeccCCh---hhhh
Q 011765 279 VVYVAFGSEAKPSQEELTEIALGLELS-KLPFFWVLKKRLGQADTEPIELPDGFE--ERTRGRGVVYTSWAPQ---LAIL 352 (478)
Q Consensus 279 ~v~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~~p~~~~--~~~~~~n~~~~~~vpq---~~vL 352 (478)
.+++..|+.. ....+..++++++.. +.+++++-.+. ....+-.... +..-.+++.+..|+++ ..++
T Consensus 24 ~~i~~~G~~~--~~Kg~~~li~a~~~l~~~~l~i~G~~~------~~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~ 95 (177)
T 2f9f_A 24 DFWLSVNRIY--PEKRIELQLEVFKKLQDEKLYIVGWFS------KGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLY 95 (177)
T ss_dssp SCEEEECCSS--GGGTHHHHHHHHHHCTTSCEEEEBCCC------TTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHH
T ss_pred CEEEEEeccc--cccCHHHHHHHHHhCCCcEEEEEecCc------cHHHHHHHHHhhhcccCCcEEEeCCCCHHHHHHHH
Confidence 4556678765 345566677777765 45655543322 1111111111 1112358999999998 5577
Q ss_pred cCCCceeeee---ccCh-hhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeeccCCCCcccHHHHHHHHHHHhcc
Q 011765 353 AHDSVGGFLT---HAGW-SSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLVE 428 (478)
Q Consensus 353 ~~~~~~~~It---HgG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~ 428 (478)
..+++ +|. +.|+ .++.||+++|+|+|+.. ...+...+.+.+.|..+ . -+.+++.++|.++++
T Consensus 96 ~~adi--~v~ps~~e~~~~~~~Eama~G~PvI~~~----~~~~~e~i~~~~~g~~~--~-----~d~~~l~~~i~~l~~- 161 (177)
T 2f9f_A 96 SRCKG--LLCTAKDEDFGLTPIEAMASGKPVIAVN----EGGFKETVINEKTGYLV--N-----ADVNEIIDAMKKVSK- 161 (177)
T ss_dssp HHCSE--EEECCSSCCSCHHHHHHHHTTCCEEEES----SHHHHHHCCBTTTEEEE--C-----SCHHHHHHHHHHHHH-
T ss_pred HhCCE--EEeCCCcCCCChHHHHHHHcCCcEEEeC----CCCHHHHhcCCCccEEe--C-----CCHHHHHHHHHHHHh-
Confidence 78888 665 3344 59999999999999964 35566666666788888 3 389999999999998
Q ss_pred cchHHH-HHHHHHHHH
Q 011765 429 EKGQIY-RDKAKEMKG 443 (478)
Q Consensus 429 ~~~~~~-~~~a~~~~~ 443 (478)
|++. ++++++.++
T Consensus 162 --~~~~~~~~~~~~a~ 175 (177)
T 2f9f_A 162 --NPDKFKKDCFRRAK 175 (177)
T ss_dssp --CTTTTHHHHHHHHH
T ss_pred --CHHHHHHHHHHHHh
Confidence 4444 566655443
|
| >2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A* | Back alignment and structure |
|---|
Probab=98.51 E-value=5.8e-06 Score=80.41 Aligned_cols=95 Identities=16% Similarity=0.198 Sum_probs=63.9
Q ss_pred cEEEeccCCh-hhhhcCCCceeeee---c--cChhhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeeccCCCCc
Q 011765 339 GVVYTSWAPQ-LAILAHDSVGGFLT---H--AGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGF 412 (478)
Q Consensus 339 n~~~~~~vpq-~~vL~~~~~~~~It---H--gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~~~~ 412 (478)
++.+.++..+ ..+++.+++ ++. . +|..++.||+++|+|+|+-|...+.......+.+.|.++.. .
T Consensus 261 ~v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~G~l~~~---~---- 331 (374)
T 2xci_A 261 DVILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKEGAGFEV---K---- 331 (374)
T ss_dssp SEEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHTTCEEEC---C----
T ss_pred cEEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHCCCEEEe---C----
Confidence 4555555444 557777776 553 2 23478999999999999877777777777666667876654 2
Q ss_pred ccHHHHHHHHHHHhcccchHHHHHHHHHHHH
Q 011765 413 FTRNSVAESLRLVLVEEKGQIYRDKAKEMKG 443 (478)
Q Consensus 413 ~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~ 443 (478)
+.++|+++|.++++++.-..+.+++++..+
T Consensus 332 -d~~~La~ai~~ll~d~~r~~mg~~ar~~~~ 361 (374)
T 2xci_A 332 -NETELVTKLTELLSVKKEIKVEEKSREIKG 361 (374)
T ss_dssp -SHHHHHHHHHHHHHSCCCCCHHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 778999999999982111234455544443
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* | Back alignment and structure |
|---|
Probab=98.38 E-value=8.7e-06 Score=80.23 Aligned_cols=84 Identities=17% Similarity=0.118 Sum_probs=57.4
Q ss_pred CcEEEeccCChhh---hhcCCCceeeee--c-cCh-hhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeeccCCC
Q 011765 338 RGVVYTSWAPQLA---ILAHDSVGGFLT--H-AGW-SSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGD 410 (478)
Q Consensus 338 ~n~~~~~~vpq~~---vL~~~~~~~~It--H-gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~~ 410 (478)
.++.+..++++.+ +++.+++ ||. . =|. .++.||+++|+|+|+ -..+ ....+++-..|..++..
T Consensus 295 ~~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v~~~~~G~lv~~~--- 364 (413)
T 2x0d_A 295 IHLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLSNWHSNIVSLEQL--- 364 (413)
T ss_dssp EEEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGGGTBTTEEEESSC---
T ss_pred CcEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhhhcCCCEEEeCCC---
Confidence 4788889998754 5667887 663 2 133 578999999999998 3222 12234444578877764
Q ss_pred CcccHHHHHHHHHHHhcccchHHHHHH
Q 011765 411 GFFTRNSVAESLRLVLVEEKGQIYRDK 437 (478)
Q Consensus 411 ~~~~~~~l~~~i~~ll~~~~~~~~~~~ 437 (478)
++++|+++|.++++ |++.+++
T Consensus 365 ---d~~~la~ai~~ll~---~~~~~~~ 385 (413)
T 2x0d_A 365 ---NPENIAETLVELCM---SFNNRDV 385 (413)
T ss_dssp ---SHHHHHHHHHHHHH---HTC----
T ss_pred ---CHHHHHHHHHHHHc---CHHHHHH
Confidence 88999999999999 6666655
|
| >3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* | Back alignment and structure |
|---|
Probab=98.26 E-value=0.00058 Score=69.45 Aligned_cols=172 Identities=12% Similarity=0.044 Sum_probs=93.7
Q ss_pred ceEEEEeCcccC-CCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCCCCChhhh--hhcCCCcEEEeccCChh---hh
Q 011765 278 SVVYVAFGSEAK-PSQEELTEIALGLELSKLPFFWVLKKRLGQADTEPIELPDGFE--ERTRGRGVVYTSWAPQL---AI 351 (478)
Q Consensus 278 ~~v~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~--~~~~~~n~~~~~~vpq~---~v 351 (478)
.++++..|.... ...+.+.+.+..+.+.+.+++++..+.. .....+. ......++.+....+.. .+
T Consensus 327 ~p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~~l~l~G~G~~--------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 398 (536)
T 3vue_A 327 IPLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKK--------KFEKLLKSMEEKYPGKVRAVVKFNAPLAHLI 398 (536)
T ss_dssp SCEEEEECCBSGGGCHHHHHHHHHHHTTSSCEEEEECCBCH--------HHHHHHHHHHHHSTTTEEEECSCCHHHHHHH
T ss_pred CcEEEEEeeccccCChHHHHHHHHHhHhhCCeEEEEeccCc--------hHHHHHHHHHhhcCCceEEEEeccHHHHHHH
Confidence 356677787763 2233343433334445566655543321 0001111 11123467766666663 36
Q ss_pred hcCCCceeeeec---cCh-hhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeeccCCCCc----ccHHHHHHHHH
Q 011765 352 LAHDSVGGFLTH---AGW-SSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGF----FTRNSVAESLR 423 (478)
Q Consensus 352 L~~~~~~~~ItH---gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~~~~----~~~~~l~~~i~ 423 (478)
++.+++ ||.= =|. .+++||+++|+|+|+... ......|.+-.-|........+|. .+.+.|+++|+
T Consensus 399 ~~~aD~--~v~PS~~E~fgl~~lEAma~G~PvI~s~~----gG~~e~V~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ 472 (536)
T 3vue_A 399 MAGADV--LAVPSRFEPCGLIQLQGMRYGTPCACAST----GGLVDTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLK 472 (536)
T ss_dssp HHHCSE--EEECCSCCSSCSHHHHHHHTTCCEEECSC----THHHHHCCBTTTEEECCCCCSCTTCCCHHHHHHHHHHHH
T ss_pred HHhhhe--eecccccCCCCHHHHHHHHcCCCEEEcCC----CCchheeeCCCCccccccCCCceeEECCCCHHHHHHHHH
Confidence 677777 6632 233 489999999999999544 455555655556765544332222 25788999999
Q ss_pred HHhcccchHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHhcc
Q 011765 424 LVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLKNHR 466 (478)
Q Consensus 424 ~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 466 (478)
++++--.++.+++.+++ .++..=+=++.++..++.++++.
T Consensus 473 ral~~~~~~~~~~~~~~---am~~~fSW~~~A~~y~~ly~~L~ 512 (536)
T 3vue_A 473 RAIKVVGTPAYEEMVRN---CMNQDLSWKGPAKNWENVLLGLG 512 (536)
T ss_dssp HHHHHTTSHHHHHHHHH---HHHSCCSSHHHHHHHHHHHHTTC
T ss_pred HHHHhcCcHHHHHHHHH---HHHhcCCHHHHHHHHHHHHHHhh
Confidence 88751114544432221 22222233677777788777654
|
| >3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A | Back alignment and structure |
|---|
Probab=98.10 E-value=0.00071 Score=68.63 Aligned_cols=147 Identities=11% Similarity=0.079 Sum_probs=93.8
Q ss_pred ceEEEEeCcccCCCHHHHHHHHHHHHhCCCCEEEEE--ecCCCCCCCCCCCCChhhh-hhcCCCcEEEeccCChhhhh--
Q 011765 278 SVVYVAFGSEAKPSQEELTEIALGLELSKLPFFWVL--KKRLGQADTEPIELPDGFE-ERTRGRGVVYTSWAPQLAIL-- 352 (478)
Q Consensus 278 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~--~~~~~~~~~~~~~~p~~~~-~~~~~~n~~~~~~vpq~~vL-- 352 (478)
.++|.+|++..+..++.+....+-+++.+..++|.. +...+ ....+-..+. ... .+.+++...+|..+.+
T Consensus 441 ~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~g----~~~~~~~~~~~~GI-~~Rv~F~g~~p~~e~la~ 515 (631)
T 3q3e_A 441 VVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSNG----ITHPYVERFIKSYL-GDSATAHPHSPYHQYLRI 515 (631)
T ss_dssp EEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCCG----GGHHHHHHHHHHHH-GGGEEEECCCCHHHHHHH
T ss_pred eEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCch----hhHHHHHHHHHcCC-CccEEEcCCCCHHHHHHH
Confidence 599999999999888888888888888777777754 21110 0000001111 111 2467788888876644
Q ss_pred -cCCCceeee---eccChhhHHHHHHhCCcEeccccc-cchhhHHHHHhhcCeEEEeeccCCCCcccHHHHHHHHHHHhc
Q 011765 353 -AHDSVGGFL---THAGWSSVVEALQFGMPLIVLTCY-ADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLV 427 (478)
Q Consensus 353 -~~~~~~~~I---tHgG~~s~~eal~~GvP~l~~P~~-~DQ~~na~~v~~~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~ 427 (478)
..+++ |+ ..+|.+|++|||++|||+|..+-. .--..-+..+...|+..++-. -+.++..+...++.+
T Consensus 516 y~~aDI--fLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~~GLpE~LIA------~d~eeYv~~Av~La~ 587 (631)
T 3q3e_A 516 LHNCDM--MVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKRLGLPEWLIA------NTVDEYVERAVRLAE 587 (631)
T ss_dssp HHTCSE--EECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHHTTCCGGGEE------SSHHHHHHHHHHHHH
T ss_pred HhcCcE--EEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHhcCCCcceec------CCHHHHHHHHHHHhC
Confidence 56666 66 347789999999999999998732 112233444566787654222 267777777778888
Q ss_pred ccchHHHHHHHHH
Q 011765 428 EEKGQIYRDKAKE 440 (478)
Q Consensus 428 ~~~~~~~~~~a~~ 440 (478)
|++.++++++
T Consensus 588 ---D~~~l~~LR~ 597 (631)
T 3q3e_A 588 ---NHQERLELRR 597 (631)
T ss_dssp ---CHHHHHHHHH
T ss_pred ---CHHHHHHHHH
Confidence 6666555543
|
| >3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula} | Back alignment and structure |
|---|
Probab=97.66 E-value=0.0026 Score=60.84 Aligned_cols=105 Identities=10% Similarity=0.085 Sum_probs=73.6
Q ss_pred CccEEEEecCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCCccccCCCCCCCCCCCeE-EEEecCCCCCCCCCCccccC
Q 011765 5 SKLQIAMFPWLAFGHMIPWLELAKLIAQK--GHKIFFISTPRNIDRLPRLPQNLASMIQ-FVKISLPHVDNLRENAEATI 81 (478)
Q Consensus 5 ~~~~il~~~~~~~gH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~~~~~g~~~~~~i~-~~~i~~~~~~~l~~~~~~~~ 81 (478)
+++|||++-..+.|++.-+..+.++|+++ +.+|++++.+.+.+.++.. +.+. ++.++ ..
T Consensus 7 ~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~~-----p~vd~vi~~~----~~--------- 68 (349)
T 3tov_A 7 DYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEYN-----PNIDELIVVD----KK--------- 68 (349)
T ss_dssp TTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSSC-----TTCSEEEEEC----CS---------
T ss_pred CCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcC-----CCccEEEEeC----cc---------
Confidence 36899999999999999999999999997 9999999999998877653 3343 44443 10
Q ss_pred CCChhHHHHHHHHHhhhhHHHHHHHhhcCC-CEEEEcCCcccHHHHHHHhCCCeEE
Q 011765 82 DLPYDEVKYLKQSFDCLEEPMAKLLQSLAP-DWLLFDFAAYWLPARARELGIPSGF 136 (478)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~l~~ll~~~~p-D~vI~D~~~~~~~~~A~~lgIP~i~ 136 (478)
.. ...+. .+. .+...+++.++ |++|.=....-...++...|+|...
T Consensus 69 --~~--~~~~~----~~~-~l~~~Lr~~~y~D~vidl~~~~rs~~l~~~~~a~~ri 115 (349)
T 3tov_A 69 --GR--HNSIS----GLN-EVAREINAKGKTDIVINLHPNERTSYLAWKIHAPITT 115 (349)
T ss_dssp --SH--HHHHH----HHH-HHHHHHHHHCCCCEEEECCCSHHHHHHHHHHCCSEEE
T ss_pred --cc--cccHH----HHH-HHHHHHhhCCCCeEEEECCCChHHHHHHHHhCCCeEE
Confidence 00 00011 111 23445567799 9999665554556778888999754
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=97.65 E-value=0.00024 Score=59.93 Aligned_cols=136 Identities=13% Similarity=0.207 Sum_probs=77.3
Q ss_pred ceEEEEeCcccCCCHHHHHHHHHHHHhCC--CCEEEEEecCCCCCCCCCCCCChhhhhhcC--CCcEEEeccCChh---h
Q 011765 278 SVVYVAFGSEAKPSQEELTEIALGLELSK--LPFFWVLKKRLGQADTEPIELPDGFEERTR--GRGVVYTSWAPQL---A 350 (478)
Q Consensus 278 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~~--~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~--~~n~~~~~~vpq~---~ 350 (478)
+++++..|+... ...+..+++++..+. .++.+.+-+. +...+.+.+..+ ..++.+ .|+|+. .
T Consensus 2 ~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~l~i~G~--------g~~~~~~~~~~~~~~~~v~~-g~~~~~~~~~ 70 (166)
T 3qhp_A 2 PFKIAMVGRYSN--EKNQSVLIKAVALSKYKQDIVLLLKGK--------GPDEKKIKLLAQKLGVKAEF-GFVNSNELLE 70 (166)
T ss_dssp CEEEEEESCCST--TTTHHHHHHHHHTCTTGGGEEEEEECC--------STTHHHHHHHHHHHTCEEEC-CCCCHHHHHH
T ss_pred ceEEEEEeccch--hcCHHHHHHHHHHhccCCCeEEEEEeC--------CccHHHHHHHHHHcCCeEEE-eecCHHHHHH
Confidence 477888888763 344556666665543 2333333322 111122222221 126777 899874 4
Q ss_pred hhcCCCceeeee----ccChhhHHHHHHhCC-cEeccccccchhhHHHHHhhcCeEEEeeccCCCCcccHHHHHHHHHHH
Q 011765 351 ILAHDSVGGFLT----HAGWSSVVEALQFGM-PLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLV 425 (478)
Q Consensus 351 vL~~~~~~~~It----HgG~~s~~eal~~Gv-P~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~~~~~~~~~l~~~i~~l 425 (478)
++..+++ +|. -|.-.++.||+++|+ |+|+....+ .....+.+.+. .++. -+.+++.++|.++
T Consensus 71 ~~~~adv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~---~~~~~~~~~~~--~~~~------~~~~~l~~~i~~l 137 (166)
T 3qhp_A 71 ILKTCTL--YVHAANVESEAIACLEAISVGIVPVIANSPLS---ATRQFALDERS--LFEP------NNAKDLSAKIDWW 137 (166)
T ss_dssp HHTTCSE--EEECCCSCCCCHHHHHHHHTTCCEEEECCTTC---GGGGGCSSGGG--EECT------TCHHHHHHHHHHH
T ss_pred HHHhCCE--EEECCcccCccHHHHHHHhcCCCcEEeeCCCC---chhhhccCCce--EEcC------CCHHHHHHHHHHH
Confidence 6777887 664 233469999999996 999933211 11111122222 3333 3899999999999
Q ss_pred hcccchHHHHHHHHH
Q 011765 426 LVEEKGQIYRDKAKE 440 (478)
Q Consensus 426 l~~~~~~~~~~~a~~ 440 (478)
++ |++.++++.+
T Consensus 138 ~~---~~~~~~~~~~ 149 (166)
T 3qhp_A 138 LE---NKLERERMQN 149 (166)
T ss_dssp HH---CHHHHHHHHH
T ss_pred Hh---CHHHHHHHHH
Confidence 99 6665544433
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=97.60 E-value=0.00045 Score=72.79 Aligned_cols=184 Identities=15% Similarity=0.154 Sum_probs=110.1
Q ss_pred CCCceEEEEeCcccCCCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCCCCChhhhh-hcCCCcEEEeccCChhhhh-
Q 011765 275 EKGSVVYVAFGSEAKPSQEELTEIALGLELSKLPFFWVLKKRLGQADTEPIELPDGFEE-RTRGRGVVYTSWAPQLAIL- 352 (478)
Q Consensus 275 ~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~-~~~~~n~~~~~~vpq~~vL- 352 (478)
+++.+||.||....+.+++.+..-++-|++.+--.+|....... ....+-..+.+ .+..+.+++.+..|..+-|
T Consensus 520 p~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~----~~~~l~~~~~~~gi~~~r~~f~~~~~~~~~l~ 595 (723)
T 4gyw_A 520 PEDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAV----GEPNIQQYAQNMGLPQNRIIFSPVAPKEEHVR 595 (723)
T ss_dssp CTTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGG----GHHHHHHHHHHTTCCGGGEEEEECCCHHHHHH
T ss_pred CCCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHH----HHHHHHHHHHhcCCCcCeEEECCCCCHHHHHH
Confidence 34569999999999999998888888888888888888764321 01111111111 1224568888888876544
Q ss_pred --cCCCceeee---eccChhhHHHHHHhCCcEecccc-ccchhhHHHHHhhcCeEEEeeccCCCCcccHHHHHHHHHHHh
Q 011765 353 --AHDSVGGFL---THAGWSSVVEALQFGMPLIVLTC-YADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVL 426 (478)
Q Consensus 353 --~~~~~~~~I---tHgG~~s~~eal~~GvP~l~~P~-~~DQ~~na~~v~~~g~G~~l~~~~~~~~~~~~~l~~~i~~ll 426 (478)
..+|+ ++ ..+|.+|++|||++|||+|.++= ..=...-+..+..+|+...+-. |.++-.+...++-
T Consensus 596 ~~~~~Di--~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~gl~e~ia~-------~~~~Y~~~a~~la 666 (723)
T 4gyw_A 596 RGQLADV--CLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLELIAK-------NRQEYEDIAVKLG 666 (723)
T ss_dssp HGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHHTCGGGBCS-------SHHHHHHHHHHHH
T ss_pred HhCCCeE--EeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHcCCcccccC-------CHHHHHHHHHHHh
Confidence 34554 76 47889999999999999999992 2333445666777788765532 4455444444555
Q ss_pred cccchHHHHHHHH-HHHHHhcccC--ChHHHHHHHHHHHH----hccccCCCccc
Q 011765 427 VEEKGQIYRDKAK-EMKGLFGDKG--RHDRYVDNFLNYLK----NHRCLRKGEEI 474 (478)
Q Consensus 427 ~~~~~~~~~~~a~-~~~~~~~~~~--~~~~~~~~i~~~~~----~~~~~~~~~~~ 474 (478)
. |.+.++..+ +|++.+...+ ...+.+..+++.++ +...+..+.||
T Consensus 667 ~---d~~~l~~lr~~l~~~~~~s~l~d~~~~~~~le~a~~~~w~r~~~G~~p~~~ 718 (723)
T 4gyw_A 667 T---DLEYLKKVRGKVWKQRISSPLFNTKQYTMELERLYLQMWEHYAAGNKPDHM 718 (723)
T ss_dssp H---CHHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHHHHHTTCCCCCB
T ss_pred c---CHHHHHHHHHHHHHHHHhCcCcCHHHHHHHHHHHHHHHHHHHHcCCCCCcc
Confidence 5 444444332 3333332211 22334444444443 33455666665
|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=97.47 E-value=0.0019 Score=56.14 Aligned_cols=76 Identities=13% Similarity=0.097 Sum_probs=57.7
Q ss_pred cEEE-eccCCh---hhhhcCCCceeeeec---cC-hhhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeeccCCC
Q 011765 339 GVVY-TSWAPQ---LAILAHDSVGGFLTH---AG-WSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGD 410 (478)
Q Consensus 339 n~~~-~~~vpq---~~vL~~~~~~~~ItH---gG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~~ 410 (478)
++.+ ..++++ ..++..+++ +|.- -| ..++.||+++|+|+|+... ......+ ..+.|..++..
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~~-~~~~g~~~~~~--- 165 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDII-TNETGILVKAG--- 165 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESC----HHHHHHC-CTTTCEEECTT---
T ss_pred CEEEEeccCCHHHHHHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeCC----CChHHHc-CCCceEEecCC---
Confidence 7888 899985 457778888 6632 23 4689999999999999654 3455555 55678777653
Q ss_pred CcccHHHHHHHHHHHhc
Q 011765 411 GFFTRNSVAESLRLVLV 427 (478)
Q Consensus 411 ~~~~~~~l~~~i~~ll~ 427 (478)
+.+++.++|.++++
T Consensus 166 ---~~~~l~~~i~~l~~ 179 (200)
T 2bfw_A 166 ---DPGELANAILKALE 179 (200)
T ss_dssp ---CHHHHHHHHHHHHH
T ss_pred ---CHHHHHHHHHHHHh
Confidence 78999999999997
|
| >1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7 | Back alignment and structure |
|---|
Probab=97.44 E-value=0.0022 Score=61.22 Aligned_cols=104 Identities=13% Similarity=0.057 Sum_probs=68.6
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCCccccCCCCCCCCCCCe-EEEEecCCCCCCCCCCccccCCC
Q 011765 7 LQIAMFPWLAFGHMIPWLELAKLIAQK--GHKIFFISTPRNIDRLPRLPQNLASMI-QFVKISLPHVDNLRENAEATIDL 83 (478)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~~~~~g~~~~~~i-~~~~i~~~~~~~l~~~~~~~~~~ 83 (478)
||||++...+.|++.-+..+.++|+++ +.+|++++.+.+.+.++.. +.+ +++.++. . ..
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~~~-----p~i~~v~~~~~--------~-----~~ 62 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSRM-----PEVNEAIPMPL--------G-----HG 62 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTTC-----TTEEEEEEC------------------
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcC-----CccCEEEEecC--------C-----cc
Confidence 799999999899999999999999987 9999999998877665443 334 3333320 0 00
Q ss_pred ChhHHHHHHHHHhhhhHHHHHHHhhcCCCEEEEcCCcccHHHHHHHhCCCeEEE
Q 011765 84 PYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAAYWLPARARELGIPSGFF 137 (478)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~~~~~~~A~~lgIP~i~~ 137 (478)
.. ... ....+.+.+++.+||++|.-....-...++...|+|....
T Consensus 63 ~~--------~~~-~~~~l~~~l~~~~~D~vid~~~~~~sa~~~~~~~~~~~ig 107 (348)
T 1psw_A 63 AL--------EIG-ERRKLGHSLREKRYDRAYVLPNSFKSALVPLFAGIPHRTG 107 (348)
T ss_dssp ----------CHH-HHHHHHHHTTTTTCSEEEECSCCSGGGHHHHHTTCSEEEE
T ss_pred cc--------chH-HHHHHHHHHHhcCCCEEEECCCChHHHHHHHHhCCCEEec
Confidence 00 000 1124455667789999993222334557788889997433
|
| >3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* | Back alignment and structure |
|---|
Probab=97.26 E-value=0.00057 Score=65.03 Aligned_cols=108 Identities=13% Similarity=0.135 Sum_probs=81.2
Q ss_pred cEEEeccCChhhh---hcCCCceeeeeccCh---------hhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeec
Q 011765 339 GVVYTSWAPQLAI---LAHDSVGGFLTHAGW---------SSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPR 406 (478)
Q Consensus 339 n~~~~~~vpq~~v---L~~~~~~~~ItHgG~---------~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~ 406 (478)
|+.+..|+|..++ |+.++.+++.+-+.+ +-+.|++++|+|+|+. +...++..+++.|+|...+
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~----~~~~~~~~v~~~~~G~~~~- 289 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQ----EGIANQELIENNGLGWIVK- 289 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEE----TTCTTTHHHHHHTCEEEES-
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEc----cChhHHHHHHhCCeEEEeC-
Confidence 8999999999775 445566555533322 4588999999999984 4567888999999999884
Q ss_pred cCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhcccCChHHHHHHHH
Q 011765 407 DEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFL 459 (478)
Q Consensus 407 ~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~ 459 (478)
+.+++.+++..+..++ -.++++|+++.++.++.+-.+.+++...+
T Consensus 290 -------~~~e~~~~i~~l~~~~-~~~m~~na~~~a~~~~~~~f~k~~l~~~~ 334 (339)
T 3rhz_A 290 -------DVEEAIMKVKNVNEDE-YIELVKNVRSFNPILRKGFFTRRLLTESV 334 (339)
T ss_dssp -------SHHHHHHHHHHCCHHH-HHHHHHHHHHHTHHHHTTHHHHHHHHHHH
T ss_pred -------CHHHHHHHHHHhCHHH-HHHHHHHHHHHHHHhhccHHHHHHHHHHH
Confidence 4578888888876532 46789999999999887777766664443
|
| >2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A* | Back alignment and structure |
|---|
Probab=96.61 E-value=0.02 Score=53.96 Aligned_cols=45 Identities=11% Similarity=0.076 Sum_probs=40.6
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCCccccCCC
Q 011765 7 LQIAMFPWLAFGHMIPWLELAKLIAQK--GHKIFFISTPRNIDRLPR 51 (478)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~~~~ 51 (478)
||||++-..+.|++.-+..+.++|+++ +.+|++++.+.+.+.++.
T Consensus 1 ~~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~~~ 47 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIPSW 47 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGGGTHHHHT
T ss_pred CeEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehhhhHHHhc
Confidence 799999999999999999999999997 999999999988776544
|
| >3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0 | Back alignment and structure |
|---|
Probab=93.46 E-value=0.13 Score=46.06 Aligned_cols=117 Identities=18% Similarity=0.194 Sum_probs=62.4
Q ss_pred CCCCCccEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCCCCCCCCcccc
Q 011765 1 MADNSKLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVDNLRENAEAT 80 (478)
Q Consensus 1 ~~~~~~~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~~ 80 (478)
|..+++||||+.-==+. |---+..|+++|.+ +|+|+++.+...+.-+... -.....+.+..+. ++ ....
T Consensus 6 ~~~~~~m~ILlTNDDGi-~apGi~aL~~~l~~-~~~V~VVAP~~~~Sg~g~s-iTl~~pl~~~~~~----~~----~~~v 74 (261)
T 3ty2_A 6 KTATPKLRLLLSNDDGV-YAKGLAILAKTLAD-LGEVDVVAPDRNRSGASNS-LTLNAPLHIKNLE----NG----MISV 74 (261)
T ss_dssp -----CCEEEEECSSCT-TCHHHHHHHHHHTT-TSEEEEEEESSCCTTCTTC-CCCSSCEEEEECT----TS----CEEE
T ss_pred hccCCCCeEEEEcCCCC-CCHHHHHHHHHHHh-cCCEEEEecCCCCcCcccc-eecCCCeEEEEec----CC----eEEE
Confidence 44567899999865554 33447888999987 8999999998876543321 1122334544432 11 1111
Q ss_pred CCCChhHHHHHHHHHhhhhHHHHHHHhhcCCCEEEEcC---------CcccHH----HHHHHhCCCeEEEec
Q 011765 81 IDLPYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDF---------AAYWLP----ARARELGIPSGFFSI 139 (478)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~---------~~~~~~----~~A~~lgIP~i~~~~ 139 (478)
...+. +...-.+..++ ..+||+||+.. ..+.|. +-|..+|||.|.++.
T Consensus 75 ~GTPa----------DCV~lal~~l~-~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 135 (261)
T 3ty2_A 75 EGTPT----------DCVHLAITGVL-PEMPDMVVAGINAGPNLGDDVWYSGTVAAAMEGRFLGLPALAVSL 135 (261)
T ss_dssp SSCHH----------HHHHHHTTTTS-SSCCSEEEEEEEESCCCGGGGGTCHHHHHC-CCSTTSCCEEEEEE
T ss_pred CCCHH----------HHHHHHHHHhc-CCCCCEEEECCcCCCCCCCCcCCchHHHHHHHHHHcCCCeEEEEc
Confidence 11121 11111222333 35899999753 122233 234667999999865
|
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A* | Back alignment and structure |
|---|
Probab=91.16 E-value=13 Score=36.83 Aligned_cols=111 Identities=15% Similarity=0.081 Sum_probs=73.1
Q ss_pred cEEEeccCChhh---hhcCCCceeee---eccChh-hHHHHHHhC---CcEeccccccchhhHHHHHhhcCeEEEeeccC
Q 011765 339 GVVYTSWAPQLA---ILAHDSVGGFL---THAGWS-SVVEALQFG---MPLIVLTCYADQGLNAKLLEEKQIVELIPRDE 408 (478)
Q Consensus 339 n~~~~~~vpq~~---vL~~~~~~~~I---tHgG~~-s~~eal~~G---vP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~ 408 (478)
.+++...+|+.+ ++..+++ || .+=|+| +..||+++| .|+|+--+.+ .+.-+.+ -|+.++..
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv--~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG----a~~~l~~--~allVnP~- 423 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL--LIFNSTVDGQNLSTFEAPLVNERDADVILSETCG----AAEVLGE--YCRSVNPF- 423 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE--EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBT----THHHHGG--GSEEECTT-
T ss_pred CEEEeCCCCHHHHHHHHHhccE--EEECcccccCChhHHHHHHhCCCCCCEEEeCCCC----CHHHhCC--CEEEECCC-
Confidence 466667788744 5556777 55 246887 568999996 6666654433 2222211 36777764
Q ss_pred CCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHhc
Q 011765 409 GDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLKNH 465 (478)
Q Consensus 409 ~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~ 465 (478)
+.+.++++|.++|+.. .++-+++.+++.+.+.+ .....-++.+++.++..
T Consensus 424 -----D~~~lA~AI~~aL~m~-~~er~~r~~~~~~~V~~-~d~~~W~~~fl~~L~~~ 473 (496)
T 3t5t_A 424 -----DLVEQAEAISAALAAG-PRQRAEAAARRRDAARP-WTLEAWVQAQLDGLAAD 473 (496)
T ss_dssp -----BHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHTT-CBHHHHHHHHHHHHHHH
T ss_pred -----CHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHH-CCHHHHHHHHHHHHhhc
Confidence 8999999999999832 24567777888777754 34556667777777543
|
| >2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=90.67 E-value=1.8 Score=38.68 Aligned_cols=114 Identities=18% Similarity=0.210 Sum_probs=63.5
Q ss_pred ccEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCCCCCCCCccccCCCCh
Q 011765 6 KLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVDNLRENAEATIDLPY 85 (478)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~~~~~~~ 85 (478)
|+|||+.-==+. +---+..|+++|.+.| +|+++.+...+.-+...- .....+++..+. .. ........+
T Consensus 1 Mp~ILlTNDDGi-~apGi~~L~~~l~~~g-~V~VvAP~~~~Sg~g~si-T~~~pl~~~~~~----~~---~~~~v~GTP- 69 (251)
T 2wqk_A 1 MPTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVGHSL-TFTEPLKMRKID----TD---FYTVIDGTP- 69 (251)
T ss_dssp -CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCSC-CCSSCEEEEEEE----TT---EEEETTCCH-
T ss_pred CCEEEEEcCCCC-CcHHHHHHHHHHHhCC-CEEEEeeCCCCcccccCc-CCCCCceeEEee----cc---ceeecCCCh-
Confidence 356776643332 2233778899999998 599888877765433211 222335555443 11 000001111
Q ss_pred hHHHHHHHHHhhhhHHHHHHHhhcCCCEEEEcC----------Ccc---cHHHHHHHhCCCeEEEec
Q 011765 86 DEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDF----------AAY---WLPARARELGIPSGFFSI 139 (478)
Q Consensus 86 ~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~----------~~~---~~~~~A~~lgIP~i~~~~ 139 (478)
.+...-.+..++.+.+||+||+.. +.+ .|++-|..+|||.|.++.
T Consensus 70 ---------aDCV~lal~~~l~~~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S~ 127 (251)
T 2wqk_A 70 ---------ADCVHLGYRVILEEKKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSA 127 (251)
T ss_dssp ---------HHHHHHHHHTTTTTCCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred ---------HHHHhhhhhhhcCCCCCCEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEEc
Confidence 112222455566677999999842 222 345667889999999864
|
| >2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A | Back alignment and structure |
|---|
Probab=89.76 E-value=5.7 Score=33.22 Aligned_cols=134 Identities=12% Similarity=0.009 Sum_probs=67.6
Q ss_pred hhHhhhcccCCCCceEEEEeCc-ccCCCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCCCCChhhhhhcCCCcEEEe
Q 011765 265 RSIKEWLDEQEKGSVVYVAFGS-EAKPSQEELTEIALGLELSKLPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYT 343 (478)
Q Consensus 265 ~~~~~~l~~~~~~~~v~vs~Gs-~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~n~~~~ 343 (478)
.++-++|-..+ ..+||-|. .. ......++..+.+-+.+-++... ....+... -...+++
T Consensus 35 ~~lg~~La~~g---~~lVsGGg~~G-----im~aa~~gAl~~gG~tigVlP~~-------~~~~~~~~-----~~~~i~~ 94 (176)
T 2iz6_A 35 NELGKQIATHG---WILLTGGRSLG-----VMHEAMKGAKEAGGTTIGVLPGP-------DTSEISDA-----VDIPIVT 94 (176)
T ss_dssp HHHHHHHHHTT---CEEEEECSSSS-----HHHHHHHHHHHTTCCEEEEECC------------CCTT-----CSEEEEC
T ss_pred HHHHHHHHHCC---CEEEECCCccC-----HhHHHHHHHHHcCCEEEEEeCch-------hhhhhccC-----CceeEEc
Confidence 44556665543 66677665 33 23334445445566666666421 11111110 0124445
Q ss_pred ccCCh-hhhhcCCCceeeeeccChhhHHHH---HHhCCcEeccccccchhhHHHHHhhcCeEEEeeccCCCCcccHHHHH
Q 011765 344 SWAPQ-LAILAHDSVGGFLTHAGWSSVVEA---LQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVA 419 (478)
Q Consensus 344 ~~vpq-~~vL~~~~~~~~ItHgG~~s~~ea---l~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~~~~~~~~~l~ 419 (478)
.+.+. ..++..-+-..++-=||.||+.|+ +.+++|++.+|.|. .....+.........-. + +++++.
T Consensus 95 ~~~~~Rk~~m~~~sda~IvlpGg~GTL~E~~~al~~~kpV~~l~~~~---~~~gfi~~~~~~~i~~~-~-----~~~e~~ 165 (176)
T 2iz6_A 95 GLGSARDNINALSSNVLVAVGMGPGTAAEVALALKAKKPVVLLGTQP---EAEKFFTSLDAGLVHVA-A-----DVAGAI 165 (176)
T ss_dssp CCCSSSCCCCGGGCSEEEEESCCHHHHHHHHHHHHTTCCEEEESCCH---HHHHHHHHHCTTTEEEE-S-----SHHHHH
T ss_pred CCHHHHHHHHHHhCCEEEEecCCccHHHHHHHHHHhCCcEEEEcCcc---cccccCChhhcCeEEEc-C-----CHHHHH
Confidence 55555 334432222346667888886655 77999999999843 11112222222222222 2 677777
Q ss_pred HHHHHHhc
Q 011765 420 ESLRLVLV 427 (478)
Q Consensus 420 ~~i~~ll~ 427 (478)
+.+++.+.
T Consensus 166 ~~l~~~~~ 173 (176)
T 2iz6_A 166 AAVKQLLA 173 (176)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77766554
|
| >1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1 | Back alignment and structure |
|---|
Probab=89.31 E-value=0.54 Score=37.61 Aligned_cols=50 Identities=12% Similarity=0.109 Sum_probs=35.9
Q ss_pred CCCCCccEEEEe-cCCCc-cCHHHHHHHHHHHHhCCCeEEEEeCCCccccCC
Q 011765 1 MADNSKLQIAMF-PWLAF-GHMIPWLELAKLIAQKGHKIFFISTPRNIDRLP 50 (478)
Q Consensus 1 ~~~~~~~~il~~-~~~~~-gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~ 50 (478)
|...+.||+|++ ..|-. ..+--.+-++..|.++||+|++++++.....++
T Consensus 1 ~~~~~~m~~LilLGCPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~npAAlkLle 52 (157)
T 1kjn_A 1 MKTESTGKALMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTANPAALRLVQ 52 (157)
T ss_dssp -----CCEEEEECCCSCSTTHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHH
T ss_pred CccccceeeeEEecCCCCcchhhHHHHHHHHHHhcCCeeEEecCHHHHhhee
Confidence 566678998775 44544 666668889999999999999999998766554
|
| >4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=87.77 E-value=4.1 Score=33.77 Aligned_cols=140 Identities=14% Similarity=0.084 Sum_probs=78.6
Q ss_pred CceEEEEeCcccCCCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCCCCChhhhhhcCCCcEEEeccCChhhhhcCCC
Q 011765 277 GSVVYVAFGSEAKPSQEELTEIALGLELSKLPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDS 356 (478)
Q Consensus 277 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~n~~~~~~vpq~~vL~~~~ 356 (478)
+|.|-|-+||.+ +....++..+.|++++..+-..+. ..-..|+.+. +|+-..+ ...
T Consensus 22 kp~V~IimGS~S--D~~v~~~a~~~L~~~gI~~e~~V~--------SAHRtp~~l~-----------~~~~~a~---~~g 77 (181)
T 4b4k_A 22 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVV--------SAHRTPDYMF-----------EYAETAR---ERG 77 (181)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEEC--------CTTTSHHHHH-----------HHHHHTT---TTT
T ss_pred CccEEEEECCHh--HHHHHHHHHHHHHHcCCCeeEEEE--------ccccChHHHH-----------HHHHHHH---hcC
Confidence 567888899877 778888899999999988644443 2234554322 1211111 112
Q ss_pred ceeeeeccChh----hHHHHHHhCCcEecccccc---chhhHHHHHhhc--CeEEEe-eccCCCCcccHHHHHHHHHHHh
Q 011765 357 VGGFLTHAGWS----SVVEALQFGMPLIVLTCYA---DQGLNAKLLEEK--QIVELI-PRDEGDGFFTRNSVAESLRLVL 426 (478)
Q Consensus 357 ~~~~ItHgG~~----s~~eal~~GvP~l~~P~~~---DQ~~na~~v~~~--g~G~~l-~~~~~~~~~~~~~l~~~i~~ll 426 (478)
++++|.=+|.- ++..+ ..-+|+|++|... +-.+.-.-+.++ |+.+.- .... .|-.++.-++..|-. +
T Consensus 78 ~~ViIa~AG~aahLpGvvAa-~T~~PVIGVPv~s~~l~G~DsLlSivQMP~GvpVaTvaig~-~ga~NAallA~qILa-~ 154 (181)
T 4b4k_A 78 LKVIIAGAGGAAHLPGMVAA-KTNLPVIGVPVQSKALNGLDSLLSIVQMPGGVPVATVAIGK-AGSTNAGLLAAQILG-S 154 (181)
T ss_dssp CCEEEEEECSSCCHHHHHHT-TCCSCEEEEECCCTTTTTHHHHHHHHTCCTTCCCEECCSSH-HHHHHHHHHHHHHHT-T
T ss_pred ceEEEEeccccccchhhHHh-cCCCCEEEEecCCCCccchhhHHHHHhCCCCCceEEEecCC-ccHHHHHHHHHHHHc-c
Confidence 23377666543 33333 3456999999853 445555566666 554433 2110 000233334433322 2
Q ss_pred cccchHHHHHHHHHHHHHhc
Q 011765 427 VEEKGQIYRDKAKEMKGLFG 446 (478)
Q Consensus 427 ~~~~~~~~~~~a~~~~~~~~ 446 (478)
. |++++++++.+++...
T Consensus 155 ~---d~~l~~kl~~~r~~~~ 171 (181)
T 4b4k_A 155 F---HDDIHDALELRREAIE 171 (181)
T ss_dssp T---CHHHHHHHHHHHHHHH
T ss_pred C---CHHHHHHHHHHHHHHH
Confidence 3 6889999988887754
|
| >1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1 | Back alignment and structure |
|---|
Probab=87.27 E-value=6.2 Score=35.71 Aligned_cols=113 Identities=18% Similarity=0.067 Sum_probs=63.0
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCCCCCCCCccccCCCChh
Q 011765 7 LQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVDNLRENAEATIDLPYD 86 (478)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~~~~~~~~ 86 (478)
||||+.-==+. +---+..|+++|++.| +|+++.+...+.-+...- .+...+++..++.. + .........+.
T Consensus 1 M~ILlTNDDGi-~ApGi~aL~~aL~~~g-~V~VVAP~~~qSg~g~si-Tl~~pl~~~~~~~~---~--~~~~~v~GTPa- 71 (280)
T 1l5x_A 1 MKILVTNDDGV-HSPGLRLLYQFALSLG-DVDVVAPESPKSATGLGI-TLHKPLRMYEVDLC---G--FRAIATSGTPS- 71 (280)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHGGGS-EEEEEEESSCTTTSCSSC-CCSSCBCEEEEECS---S--SEEEEESSCHH-
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccc-cCCCCeEEEEeccC---C--CceEEECCcHH-
Confidence 67777644333 2233788999999888 999999988765443221 22233555555410 0 00111111121
Q ss_pred HHHHHHHHHhhhhHHHHHHHhhcCCCEEEEcC-----------Cc---ccHHHHHHHhCCCeEEEec
Q 011765 87 EVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDF-----------AA---YWLPARARELGIPSGFFSI 139 (478)
Q Consensus 87 ~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~-----------~~---~~~~~~A~~lgIP~i~~~~ 139 (478)
+...-.+..+ ..+||+||+.. +. ..|.+-|..+|||.|.++.
T Consensus 72 ---------DCV~lal~~l--~~~PDLVvSGIN~G~Nlg~d~v~ySGTVgAA~Ea~~~GiPaIA~S~ 127 (280)
T 1l5x_A 72 ---------DTVYLATFGL--GRKYDIVLSGINLGDNTSLQVILSSGTLGAAFQAALLGIPALAYSA 127 (280)
T ss_dssp ---------HHHHHHHHHH--TSCCSEEEEEEEEBCCCSHHHHTTCHHHHHHHHHHHTTCCEEEEEE
T ss_pred ---------HHHHHHHhcC--CCCCCEEEECCccCCcCCccccccchhHHHHHHHHHcCCCeEEEEc
Confidence 1122234444 46899999752 11 1344556789999999965
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* | Back alignment and structure |
|---|
Probab=87.24 E-value=3.7 Score=42.22 Aligned_cols=34 Identities=15% Similarity=0.196 Sum_probs=25.4
Q ss_pred hhhcCCCceeeee---ccCh-hhHHHHHHhCCcEeccccc
Q 011765 350 AILAHDSVGGFLT---HAGW-SSVVEALQFGMPLIVLTCY 385 (478)
Q Consensus 350 ~vL~~~~~~~~It---HgG~-~s~~eal~~GvP~l~~P~~ 385 (478)
++++.+++ ||. +=|+ .+.+||+++|+|+|+.-..
T Consensus 514 ~~~~~adv--fV~PS~~EgfGl~~LEAmA~G~PvI~s~~g 551 (725)
T 3nb0_A 514 EFVRGCHL--GVFPSYYEPWGYTPAECTVMGVPSITTNVS 551 (725)
T ss_dssp HHHHHCSE--EECCCSSBSSCHHHHHHHHTTCCEEEETTB
T ss_pred HHHhhceE--EEeccccCCCCHHHHHHHHcCCCEEEeCCC
Confidence 46777888 663 3344 5899999999999995543
|
| >1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1 | Back alignment and structure |
|---|
Probab=86.71 E-value=6.4 Score=32.35 Aligned_cols=142 Identities=15% Similarity=0.109 Sum_probs=79.7
Q ss_pred CceEEEEeCcccCCCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCCCCChhhhhhcCCCcEEEeccCChhhhhcCCC
Q 011765 277 GSVVYVAFGSEAKPSQEELTEIALGLELSKLPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDS 356 (478)
Q Consensus 277 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~n~~~~~~vpq~~vL~~~~ 356 (478)
+|.|-|-+||.+ +....++....|+.++.++-..+. ..-..|+... .|+.+.+ -...+
T Consensus 11 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~--------SaHR~p~~l~-----------~~~~~a~-~~g~~ 68 (170)
T 1xmp_A 11 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVV--------SAHRTPDYMF-----------EYAETAR-ERGLK 68 (170)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEEC--------CTTTSHHHHH-----------HHHHHTT-TTTCC
T ss_pred CCcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEE--------eccCCHHHHH-----------HHHHHHH-hCCCc
Confidence 567888888877 778888889999999988544333 2334555322 1111111 01133
Q ss_pred ceeeeeccChhhHHHHHH---hCCcEecccccc--chhhH-HHHHhh--cCeEEE-eeccCCCCcccHHHHHHHHHHHhc
Q 011765 357 VGGFLTHAGWSSVVEALQ---FGMPLIVLTCYA--DQGLN-AKLLEE--KQIVEL-IPRDEGDGFFTRNSVAESLRLVLV 427 (478)
Q Consensus 357 ~~~~ItHgG~~s~~eal~---~GvP~l~~P~~~--DQ~~n-a~~v~~--~g~G~~-l~~~~~~~~~~~~~l~~~i~~ll~ 427 (478)
+ +|.=+|...-+-.+- .-+|+|.+|... .+... -.-+.+ .|+.+. +.+.+ -+-.++..++..|- -+.
T Consensus 69 V--iIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~daLlSivqmP~GvpVatV~I~~-a~~~nAallAaqIl-a~~ 144 (170)
T 1xmp_A 69 V--IIAGAGGAAHLPGMVAAKTNLPVIGVPVQSKALNGLDSLLSIVQMPGGVPVATVAIGK-AGSTNAGLLAAQIL-GSF 144 (170)
T ss_dssp E--EEEEEESSCCHHHHHHTTCCSCEEEEEECCTTTTTHHHHHHHHCCCTTCCCEECCSSH-HHHHHHHHHHHHHH-HTT
T ss_pred E--EEEECCchhhhHHHHHhccCCCEEEeeCCCCCCCcHHHHHHHhcCCCCCeeEEEecCC-cchHHHHHHHHHHH-ccC
Confidence 4 777666543333332 346999999853 22222 233555 366432 12210 00145666665554 344
Q ss_pred ccchHHHHHHHHHHHHHhcc
Q 011765 428 EEKGQIYRDKAKEMKGLFGD 447 (478)
Q Consensus 428 ~~~~~~~~~~a~~~~~~~~~ 447 (478)
|++++++++.+++...+
T Consensus 145 ---d~~l~~kl~~~r~~~~~ 161 (170)
T 1xmp_A 145 ---HDDIHDALELRREAIEK 161 (170)
T ss_dssp ---CHHHHHHHHHHHHHHHH
T ss_pred ---CHHHHHHHHHHHHHHHH
Confidence 68999999999887653
|
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* | Back alignment and structure |
|---|
Probab=86.67 E-value=3.7 Score=40.63 Aligned_cols=107 Identities=15% Similarity=0.098 Sum_probs=70.7
Q ss_pred EE-EeccCChhh---hhcCCCceeeee---ccCh-hhHHHHHHhCC-----cEecccccc--chhhHHHHHhhcCeEEEe
Q 011765 340 VV-YTSWAPQLA---ILAHDSVGGFLT---HAGW-SSVVEALQFGM-----PLIVLTCYA--DQGLNAKLLEEKQIVELI 404 (478)
Q Consensus 340 ~~-~~~~vpq~~---vL~~~~~~~~It---HgG~-~s~~eal~~Gv-----P~l~~P~~~--DQ~~na~~v~~~g~G~~l 404 (478)
++ +..++++.+ ++..+++ ||. .=|+ .++.||+++|+ |+|+..+.+ ++. .-|..+
T Consensus 333 v~~~~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~l---------~~g~lv 401 (482)
T 1uqt_A 333 LYYLNQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANEL---------TSALIV 401 (482)
T ss_dssp EEEECSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTC---------TTSEEE
T ss_pred EEEeCCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCCHHHh---------CCeEEE
Confidence 44 457788755 5566777 663 3466 48999999998 677655433 222 135666
Q ss_pred eccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHhc
Q 011765 405 PRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLKNH 465 (478)
Q Consensus 405 ~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~ 465 (478)
+.. +.+.++++|.++|+.. .+.-+++.++..+...+ -.....++.+++.+++.
T Consensus 402 ~p~------d~~~lA~ai~~lL~~~-~~~r~~~~~~~~~~v~~-~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 402 NPY------DRDEVAAALDRALTMS-LAERISRHAEMLDVIVK-NDINHWQECFISDLKQI 454 (482)
T ss_dssp CTT------CHHHHHHHHHHHHTCC-HHHHHHHHHHHHHHHHH-TCHHHHHHHHHHHHHHS
T ss_pred CCC------CHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHhc
Confidence 653 7899999999999831 12344555555555544 45677888888888765
|
| >4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia} | Back alignment and structure |
|---|
Probab=86.54 E-value=2.9 Score=34.40 Aligned_cols=142 Identities=12% Similarity=0.060 Sum_probs=78.9
Q ss_pred CCceEEEEeCcccCCCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCCCCChhhhhhcCCCcEEEeccCChhhhhcCC
Q 011765 276 KGSVVYVAFGSEAKPSQEELTEIALGLELSKLPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHD 355 (478)
Q Consensus 276 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~n~~~~~~vpq~~vL~~~ 355 (478)
+.|.|-|-+||.+ +....++..+.|++++.++-..+. ..-..|+.+. .|+-... -...
T Consensus 11 ~~P~V~IimGS~S--D~~v~~~a~~~l~~~gi~~ev~V~--------saHR~p~~l~-----------~~~~~a~-~~g~ 68 (173)
T 4grd_A 11 SAPLVGVLMGSSS--DWDVMKHAVAILQEFGVPYEAKVV--------SAHRMPDEMF-----------DYAEKAR-ERGL 68 (173)
T ss_dssp SSCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEEC--------CTTTSHHHHH-----------HHHHHHT-TTTC
T ss_pred CCCeEEEEeCcHh--HHHHHHHHHHHHHHcCCCEEEEEE--------ccccCHHHHH-----------HHHHHHH-hcCC
Confidence 3567888889877 778888889999999988544333 2344555322 1221111 1122
Q ss_pred CceeeeeccCh-h---hHHHHHHhCCcEecccccc---chhhHHHHHhhc--CeEEEeeccCCCCcccHHHHHHHHHHHh
Q 011765 356 SVGGFLTHAGW-S---SVVEALQFGMPLIVLTCYA---DQGLNAKLLEEK--QIVELIPRDEGDGFFTRNSVAESLRLVL 426 (478)
Q Consensus 356 ~~~~~ItHgG~-~---s~~eal~~GvP~l~~P~~~---DQ~~na~~v~~~--g~G~~l~~~~~~~~~~~~~l~~~i~~ll 426 (478)
++ +|.=+|. + ++..+ ..-+|+|++|... +..+--.-+.++ ||.+..-.-..++-.++.-++..|- -+
T Consensus 69 ~V--iIa~AG~aahLpgvvA~-~t~~PVIgVPv~~~~l~G~dsLlSivqMP~Gvpvatv~i~~~~a~NAallA~~IL-a~ 144 (173)
T 4grd_A 69 RA--IIAGAGGAAHLPGMLAA-KTTVPVLGVPVASKYLKGVDSLHSIVQMPKGVPVATFAIGEAGAANAALFAVSIL-SG 144 (173)
T ss_dssp SE--EEEEEESSCCHHHHHHH-HCCSCEEEEEECCTTTTTHHHHHHHHCCCTTSCCEECCSSHHHHHHHHHHHHHHH-TT
T ss_pred eE--EEEeccccccchhhhee-cCCCCEEEEEcCCCCCCchhHHHHHHhCCCCCCceEEecCCcchHHHHHHHHHHH-cC
Confidence 33 6665554 2 44443 4578999999743 334434445555 6654432111000134444444432 23
Q ss_pred cccchHHHHHHHHHHHHHhc
Q 011765 427 VEEKGQIYRDKAKEMKGLFG 446 (478)
Q Consensus 427 ~~~~~~~~~~~a~~~~~~~~ 446 (478)
. |++++++++.+++...
T Consensus 145 ~---d~~l~~kl~~~r~~~~ 161 (173)
T 4grd_A 145 N---SVDYANRLAAFRVRQN 161 (173)
T ss_dssp S---CHHHHHHHHHHHHHHH
T ss_pred C---CHHHHHHHHHHHHHHH
Confidence 4 7899999998888764
|
| >1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A* | Back alignment and structure |
|---|
Probab=86.45 E-value=4.4 Score=35.96 Aligned_cols=114 Identities=14% Similarity=0.148 Sum_probs=62.3
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCCCCCCC-CccccCCCCh
Q 011765 7 LQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVDNLRE-NAEATIDLPY 85 (478)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~~l~~-~~~~~~~~~~ 85 (478)
||||+.-==+. |---+..|+++|++.| +|+++.+...+.-+...- .....+++..+.. + +. ........+.
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~si-Tl~~pl~~~~~~~----~-~~~~~~~v~GTPa 72 (247)
T 1j9j_A 1 MRILVTNDDGI-QSKGIIVLAELLSEEH-EVFVVAPDKERSATGHSI-TIHVPLWMKKVFI----S-ERVVAYSTTGTPA 72 (247)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTCTTCC-CCSSCCCEEECCC----S-SSEEEEEESSCHH
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccc-cCCCCeEEEEecc----C-CCCceEEECCcHH
Confidence 67777644333 2233788999999888 899999988765443221 1223344444431 0 00 0011111111
Q ss_pred hHHHHHHHHHhhhhHHHHHHHhhcCCCEEEEcC----------Ccc---cHHHHHHHhCCCeEEEec
Q 011765 86 DEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDF----------AAY---WLPARARELGIPSGFFSI 139 (478)
Q Consensus 86 ~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~----------~~~---~~~~~A~~lgIP~i~~~~ 139 (478)
+...-.+..++ ..+||+||+.. +.+ .|.+-|..+|||.|.++.
T Consensus 73 ----------DCV~lal~~l~-~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 128 (247)
T 1j9j_A 73 ----------DCVKLAYNVVM-DKRVDLIVSGVNRGPNMGMDILHSGTVSGAMEGAMMNIPSIAISS 128 (247)
T ss_dssp ----------HHHHHHHHTTS-TTCCSEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred ----------HHHHHHHHhhc-cCCCCEEEECCccCCCCCcCeecchhHHHHHHHHhcCCCeEEEec
Confidence 11222333444 35899999753 212 344557789999999865
|
| >3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A* | Back alignment and structure |
|---|
Probab=85.22 E-value=7.3 Score=31.71 Aligned_cols=136 Identities=15% Similarity=0.050 Sum_probs=77.4
Q ss_pred ceEEEEeCcccCCCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCCCCChhhhhhcCCCcEEEeccCChhhhhcCCCc
Q 011765 278 SVVYVAFGSEAKPSQEELTEIALGLELSKLPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSV 357 (478)
Q Consensus 278 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~n~~~~~~vpq~~vL~~~~~ 357 (478)
|.|-|-+||.+ +....++....|+..+.++-..+. ..-..|+... .|+...+ ..-.+
T Consensus 3 ~~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~--------saHR~p~~~~-----------~~~~~a~--~~~~~ 59 (159)
T 3rg8_A 3 PLVIILMGSSS--DMGHAEKIASELKTFGIEYAIRIG--------SAHKTAEHVV-----------SMLKEYE--ALDRP 59 (159)
T ss_dssp CEEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEEC--------CTTTCHHHHH-----------HHHHHHH--TSCSC
T ss_pred CeEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEE--------cccCCHHHHH-----------HHHHHhh--hcCCC
Confidence 45667788766 777788888889999987544333 2334555322 2222211 11123
Q ss_pred eeeeeccChh----hHHHHHHhCCcEeccccc---cchhhHHHHHhhc--CeEEEeeccCCCCcccHHHHHHHHHHHhcc
Q 011765 358 GGFLTHAGWS----SVVEALQFGMPLIVLTCY---ADQGLNAKLLEEK--QIVELIPRDEGDGFFTRNSVAESLRLVLVE 428 (478)
Q Consensus 358 ~~~ItHgG~~----s~~eal~~GvP~l~~P~~---~DQ~~na~~v~~~--g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~ 428 (478)
++||.=+|.. ++..++ .-+|+|.+|.. .+..+ -.-+.++ |+.+.--... .++..++..|-. +.
T Consensus 60 ~ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~d-LlS~vqmp~GvpVatv~~~----~nAa~lA~~Il~-~~- 131 (159)
T 3rg8_A 60 KLYITIAGRSNALSGFVDGF-VKGATIACPPPSDSFAGAD-IYSSLRMPSGISPALVLEP----KNAALLAARIFS-LY- 131 (159)
T ss_dssp EEEEEECCSSCCHHHHHHHH-SSSCEEECCCCCCGGGGTH-HHHHHCCCTTCCCEECCSH----HHHHHHHHHHHT-TT-
T ss_pred cEEEEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCcc-HHHHHhCCCCCceEEecCc----hHHHHHHHHHHh-CC-
Confidence 4488777753 344433 56899999963 23344 3334444 5544332111 466666554433 23
Q ss_pred cchHHHHHHHHHHHHHhc
Q 011765 429 EKGQIYRDKAKEMKGLFG 446 (478)
Q Consensus 429 ~~~~~~~~~a~~~~~~~~ 446 (478)
|+.++++++..++...
T Consensus 132 --d~~l~~kl~~~r~~~~ 147 (159)
T 3rg8_A 132 --DKEIADSVKSYMESNA 147 (159)
T ss_dssp --CHHHHHHHHHHHHHHH
T ss_pred --CHHHHHHHHHHHHHHH
Confidence 6889999998888754
|
| >3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A* | Back alignment and structure |
|---|
Probab=85.19 E-value=11 Score=30.88 Aligned_cols=141 Identities=12% Similarity=0.025 Sum_probs=76.4
Q ss_pred ceEEEEeCcccCCCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCCCCChhhhhhcCCCcEEEeccCChhhhhcCCCc
Q 011765 278 SVVYVAFGSEAKPSQEELTEIALGLELSKLPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSV 357 (478)
Q Consensus 278 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~n~~~~~~vpq~~vL~~~~~ 357 (478)
|.|-|-+||.+ +....++..+.|+.++..+-..+. ..-..|+.+. +|+.. +....+
T Consensus 6 p~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~--------SaHRtp~~l~-----------~~~~~---~~~~g~ 61 (166)
T 3oow_A 6 VQVGVIMGSKS--DWSTMKECCDILDNLGIGYECEVV--------SAHRTPDKMF-----------DYAET---AKERGL 61 (166)
T ss_dssp EEEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEEC--------CTTTCHHHHH-----------HHHHH---TTTTTC
T ss_pred CeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEE--------cCcCCHHHHH-----------HHHHH---HHhCCC
Confidence 45777788766 777888888899999986543332 2234555322 22211 111122
Q ss_pred eeeeeccChhhHHHHHH---hCCcEecccccc---chhhHHHHHhhc--CeEEEeeccCCCCcccHHHHHHHHHHHhccc
Q 011765 358 GGFLTHAGWSSVVEALQ---FGMPLIVLTCYA---DQGLNAKLLEEK--QIVELIPRDEGDGFFTRNSVAESLRLVLVEE 429 (478)
Q Consensus 358 ~~~ItHgG~~s~~eal~---~GvP~l~~P~~~---DQ~~na~~v~~~--g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~ 429 (478)
++||.=+|...-+-.+- .-+|+|.+|... +..+--.-+.+. |+++..-.-++.|-.++..++..|-. +.
T Consensus 62 ~ViIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~dsLlS~vqmp~gvpVatV~I~~ag~~nAa~lAa~Il~-~~-- 138 (166)
T 3oow_A 62 KVIIAGAGGAAHLPGMVAAKTTLPVLGVPVKSSTLNGQDSLLSIVQMPAGIPVATFAIGMAGAKNAALFAASILQ-HT-- 138 (166)
T ss_dssp CEEEEEECSSCCHHHHHHHTCSSCEEEEECCCTTTTTHHHHHHHHTCCTTSCCEECCSTHHHHHHHHHHHHHHHG-GG--
T ss_pred cEEEEECCcchhhHHHHHhccCCCEEEeecCcCCCCCHHHHHHHhcCCCCCceEEEecCCccchHHHHHHHHHHc-CC--
Confidence 33887777633222222 346999999743 223333335555 55444321110000355555544433 23
Q ss_pred chHHHHHHHHHHHHHhc
Q 011765 430 KGQIYRDKAKEMKGLFG 446 (478)
Q Consensus 430 ~~~~~~~~a~~~~~~~~ 446 (478)
|+.++++++.+++...
T Consensus 139 -d~~l~~kl~~~r~~~~ 154 (166)
T 3oow_A 139 -DINIAKALAEFRAEQT 154 (166)
T ss_dssp -CHHHHHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHHHH
Confidence 6889999999888764
|
| >1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A* | Back alignment and structure |
|---|
Probab=84.62 E-value=7.5 Score=33.10 Aligned_cols=97 Identities=10% Similarity=0.070 Sum_probs=60.9
Q ss_pred ccEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCcc------ccCCCCCCCCCCCeEEEEecCCCCCCCCCCccc
Q 011765 6 KLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNI------DRLPRLPQNLASMIQFVKISLPHVDNLRENAEA 79 (478)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~------~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~ 79 (478)
+-.|++++..+.|-..-.+.+|-+.+.+|++|.|+..-... +.+...+ +++.... .++. .
T Consensus 28 ~g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF~Kg~~~~gE~~~l~~L~------v~~~~~g----~gf~----~ 93 (196)
T 1g5t_A 28 RGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFIKGTWPNGERNLLEPHG------VEFQVMA----TGFT----W 93 (196)
T ss_dssp CCCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEESSCCSSCCHHHHHHGGGT------CEEEECC----TTCC----C
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEeeCCCCCccHHHHHHhCC------cEEEEcc----cccc----c
Confidence 45788888889999999999999999999999999765531 1222222 6776664 2211 0
Q ss_pred cCCCChhHHHHHHHHHhhhhHHHHHHHhhcCCCEEEEcCCc
Q 011765 80 TIDLPYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAA 120 (478)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~ 120 (478)
. . .....-............+.+.+.++|+||.|-+.
T Consensus 94 --~-~-~~~~~~~~~a~~~l~~a~~~l~~~~yDlvILDEi~ 130 (196)
T 1g5t_A 94 --E-T-QNREADTAACMAVWQHGKRMLADPLLDMVVLDELT 130 (196)
T ss_dssp --C-G-GGHHHHHHHHHHHHHHHHHHTTCTTCSEEEEETHH
T ss_pred --C-C-CCcHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCCC
Confidence 0 0 01111122223333455566667789999999654
|
| >2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A | Back alignment and structure |
|---|
Probab=84.08 E-value=11 Score=33.26 Aligned_cols=115 Identities=16% Similarity=0.115 Sum_probs=62.9
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCC-CCCCCCccccCCCCh
Q 011765 7 LQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHV-DNLRENAEATIDLPY 85 (478)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~-~~l~~~~~~~~~~~~ 85 (478)
||||+.-==+. |---+..|+++|++.| +|+++.+...+.-+...- .+...+++..++.... ++. ........+.
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~si-Tl~~pl~~~~~~~~~~~~~~--~~~~v~GTPa 75 (244)
T 2e6c_A 1 MRILVTNDDGI-YSPGLWALAEAASQFG-EVFVAAPDTEQSAAGHAI-TIAHPVRAYPHPSPLHAPHF--PAYRVRGTPA 75 (244)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEECSSCCCCCSSC-CCSSCBEEEECCCCTTSCCC--CEEEEESCHH
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccc-cCCCCeEEEEeccCcCCCCC--ceEEEcCcHH
Confidence 67777644333 2233788999999888 899999988765443221 2334466666642100 000 0111111121
Q ss_pred hHHHHHHHHHhhhhHHHHHHHhhcCCCEEEEcC----------Ccc---cHHHHHHHhCCCeEEEec
Q 011765 86 DEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDF----------AAY---WLPARARELGIPSGFFSI 139 (478)
Q Consensus 86 ~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~----------~~~---~~~~~A~~lgIP~i~~~~ 139 (478)
+...-.+. + ..+||+||+.. +.+ .|.+-|..+|||.|.++.
T Consensus 76 ----------DCV~lal~--l-~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 129 (244)
T 2e6c_A 76 ----------DCVALGLH--L-FGPVDLVLSGVNLGSNLGHEIWHSGTVAAAKQGYLFGLSAAAFSV 129 (244)
T ss_dssp ----------HHHHHHHH--H-SCSCCEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCEEEEEEE
T ss_pred ----------HHHHHHHc--C-CCCCCEEEECCccCCCCCcCeechHhHHHHHHHHhcCCCeEEEec
Confidence 11111222 2 46899999753 212 344557789999999854
|
| >1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1 | Back alignment and structure |
|---|
Probab=83.82 E-value=7.5 Score=32.35 Aligned_cols=139 Identities=17% Similarity=0.118 Sum_probs=81.5
Q ss_pred CceEEEEeCcccCCCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCCCCChhhhhhcCCCcEEEeccCChhhhhcCCC
Q 011765 277 GSVVYVAFGSEAKPSQEELTEIALGLELSKLPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDS 356 (478)
Q Consensus 277 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~n~~~~~~vpq~~vL~~~~ 356 (478)
-|.|-|-+||.+ +....++....|+.++.++=..+. ..-..|+... .|+.+.+ -...+
T Consensus 13 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~--------SaHR~p~~l~-----------~~~~~a~-~~g~~ 70 (183)
T 1o4v_A 13 VPRVGIIMGSDS--DLPVMKQAAEILEEFGIDYEITIV--------SAHRTPDRMF-----------EYAKNAE-ERGIE 70 (183)
T ss_dssp -CEEEEEESCGG--GHHHHHHHHHHHHHTTCEEEEEEC--------CTTTCHHHHH-----------HHHHHTT-TTTCC
T ss_pred CCeEEEEeccHH--HHHHHHHHHHHHHHcCCCeEEEEE--------cccCCHHHHH-----------HHHHHHH-hCCCc
Confidence 357888888877 778888889999999988544333 2334555322 1211111 01233
Q ss_pred ceeeeeccChh----hHHHHHHhCCcEecccccc--chhhHH-HHHhhc--CeEEEe-eccCCCCcccHHHHHHHHHHHh
Q 011765 357 VGGFLTHAGWS----SVVEALQFGMPLIVLTCYA--DQGLNA-KLLEEK--QIVELI-PRDEGDGFFTRNSVAESLRLVL 426 (478)
Q Consensus 357 ~~~~ItHgG~~----s~~eal~~GvP~l~~P~~~--DQ~~na-~~v~~~--g~G~~l-~~~~~~~~~~~~~l~~~i~~ll 426 (478)
+ +|.=+|.. ++..++ .-+|+|.+|... -....+ .-+.+. |+.+.. .+.. -.++..++..|- -+
T Consensus 71 V--iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSivqmP~GvpVatV~Id~---~~nAa~lAaqIl-a~ 143 (183)
T 1o4v_A 71 V--IIAGAGGAAHLPGMVASI-THLPVIGVPVKTSTLNGLDSLFSIVQMPGGVPVATVAINN---AKNAGILAASIL-GI 143 (183)
T ss_dssp E--EEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHTCCTTCCCEECCTTC---HHHHHHHHHHHH-HT
T ss_pred E--EEEecCcccccHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhcCCCCCeeEEEecCC---chHHHHHHHHHH-hc
Confidence 4 77766643 444444 678999999854 222233 335666 644322 2211 156677776664 34
Q ss_pred cccchHHHHHHHHHHHHHhcc
Q 011765 427 VEEKGQIYRDKAKEMKGLFGD 447 (478)
Q Consensus 427 ~~~~~~~~~~~a~~~~~~~~~ 447 (478)
. |++++++++..++...+
T Consensus 144 ~---d~~l~~kL~~~r~~~~~ 161 (183)
T 1o4v_A 144 K---YPEIARKVKEYKERMKR 161 (183)
T ss_dssp T---CHHHHHHHHHHHHHHHH
T ss_pred C---CHHHHHHHHHHHHHHHH
Confidence 4 68899999998888653
|
| >3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=83.39 E-value=6.2 Score=32.22 Aligned_cols=139 Identities=14% Similarity=0.092 Sum_probs=76.6
Q ss_pred ceEEEEeCcccCCCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCCCCChhhhhhcCCCcEEEeccCChhhhhcCCCc
Q 011765 278 SVVYVAFGSEAKPSQEELTEIALGLELSKLPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSV 357 (478)
Q Consensus 278 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~n~~~~~~vpq~~vL~~~~~ 357 (478)
+.|-|-+||.+ +....++....|+.++.++=..+. .....|+... .|+.... -...++
T Consensus 4 ~~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~--------SaHR~p~~~~-----------~~~~~a~-~~g~~V 61 (163)
T 3ors_A 4 MKVAVIMGSSS--DWKIMQESCNMLDYFEIPYEKQVV--------SAHRTPKMMV-----------QFASEAR-ERGINI 61 (163)
T ss_dssp CCEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEEC--------CTTTSHHHHH-----------HHHHHTT-TTTCCE
T ss_pred CeEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEE--------CCcCCHHHHH-----------HHHHHHH-hCCCcE
Confidence 45667788766 777888888899999988544333 2334555322 1111100 012334
Q ss_pred eeeeeccChh----hHHHHHHhCCcEeccccccc---hhhHHHHHhhc--CeEEEe-eccCCCCcccHHHHHHHHHHHhc
Q 011765 358 GGFLTHAGWS----SVVEALQFGMPLIVLTCYAD---QGLNAKLLEEK--QIVELI-PRDEGDGFFTRNSVAESLRLVLV 427 (478)
Q Consensus 358 ~~~ItHgG~~----s~~eal~~GvP~l~~P~~~D---Q~~na~~v~~~--g~G~~l-~~~~~~~~~~~~~l~~~i~~ll~ 427 (478)
||.=+|.. ++..++ .-+|+|.+|.... ..+--.-+.++ |+.+.. ...+ .+-.++..++..|-.+ .
T Consensus 62 --iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~vqmp~GvPVatV~I~~-a~~~nAa~lAa~Il~~-~ 136 (163)
T 3ors_A 62 --IIAGAGGAAHLPGMVASL-TTLPVIGVPIETKSLKGIDSLLSIVQMPGGIPVATTAIGA-AGAKNAGILAARMLSI-Q 136 (163)
T ss_dssp --EEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHTCCTTSCCEECCSTH-HHHHHHHHHHHHHHHT-T
T ss_pred --EEEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHHhhCCCCCceEEEEcCC-cccHHHHHHHHHHHhC-C
Confidence 77766653 444443 5689999997532 23323334445 552222 1210 0014555565555333 3
Q ss_pred ccchHHHHHHHHHHHHHhc
Q 011765 428 EEKGQIYRDKAKEMKGLFG 446 (478)
Q Consensus 428 ~~~~~~~~~~a~~~~~~~~ 446 (478)
|+.++++++.+++...
T Consensus 137 ---d~~l~~kl~~~r~~~~ 152 (163)
T 3ors_A 137 ---NPSLVEKLNQYESSLI 152 (163)
T ss_dssp ---CTHHHHHHHHHHHHHH
T ss_pred ---CHHHHHHHHHHHHHHH
Confidence 5889999999888764
|
| >3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A* | Back alignment and structure |
|---|
Probab=82.29 E-value=10 Score=31.26 Aligned_cols=140 Identities=13% Similarity=0.062 Sum_probs=75.3
Q ss_pred ceEEEEeCcccCCCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCCCCChhhhhhcCCCcEEEeccCChhhhhcCCCc
Q 011765 278 SVVYVAFGSEAKPSQEELTEIALGLELSKLPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSV 357 (478)
Q Consensus 278 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~n~~~~~~vpq~~vL~~~~~ 357 (478)
+.|-|-+||.+ +....++....|+.++.++-..+. ..-..|+... .|+.... -...++
T Consensus 13 ~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~ev~V~--------SaHR~p~~~~-----------~~~~~a~-~~g~~V 70 (174)
T 3kuu_A 13 VKIAIVMGSKS--DWATMQFAADVLTTLNVPFHVEVV--------SAHRTPDRLF-----------SFAEQAE-ANGLHV 70 (174)
T ss_dssp CCEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEEC--------CTTTCHHHHH-----------HHHHHTT-TTTCSE
T ss_pred CcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEE--------cccCCHHHHH-----------HHHHHHH-hCCCcE
Confidence 45667788766 777888888899999988644433 2334555322 1111110 112344
Q ss_pred eeeeeccChhhHHHHHH---hCCcEecccccc---chhhHHHHHhhc--CeEEEe-eccCCCCcccHHHHHHHHHHHhcc
Q 011765 358 GGFLTHAGWSSVVEALQ---FGMPLIVLTCYA---DQGLNAKLLEEK--QIVELI-PRDEGDGFFTRNSVAESLRLVLVE 428 (478)
Q Consensus 358 ~~~ItHgG~~s~~eal~---~GvP~l~~P~~~---DQ~~na~~v~~~--g~G~~l-~~~~~~~~~~~~~l~~~i~~ll~~ 428 (478)
||.=+|...-+-.+- .-+|+|.+|... +-.+--.-+.++ |+.+.. ...+ .+-.++..++..|-. +.
T Consensus 71 --iIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~dsLlS~vqmP~GvPVatV~I~~-a~~~nAa~lAa~ILa-~~- 145 (174)
T 3kuu_A 71 --IIAGNGGAAHLPGMLAAKTLVPVLGVPVQSAALSGVDSLYSIVQMPRGIPVGTLAIGK-AGAANAALLAAQILA-LH- 145 (174)
T ss_dssp --EEEEEESSCCHHHHHHHTCSSCEEEEEECCTTTTTHHHHHHHHTCCTTSCCEECCSSH-HHHHHHHHHHHHHHH-TT-
T ss_pred --EEEECChhhhhHHHHHhccCCCEEEeeCCCCCCCCHHHHHHhhhCCCCCeeEEEEeCC-ccchHHHHHHHHHHc-CC-
Confidence 777766532222222 346999999743 222323334444 542222 1110 001345555555433 33
Q ss_pred cchHHHHHHHHHHHHHhc
Q 011765 429 EKGQIYRDKAKEMKGLFG 446 (478)
Q Consensus 429 ~~~~~~~~~a~~~~~~~~ 446 (478)
|++++++++.+++...
T Consensus 146 --d~~l~~kl~~~r~~~~ 161 (174)
T 3kuu_A 146 --DTELAGRLAHWRQSQT 161 (174)
T ss_dssp --CHHHHHHHHHHHHHHH
T ss_pred --CHHHHHHHHHHHHHHH
Confidence 6889999999888764
|
| >3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0 | Back alignment and structure |
|---|
Probab=82.05 E-value=6.7 Score=32.38 Aligned_cols=139 Identities=16% Similarity=0.083 Sum_probs=78.9
Q ss_pred CceEEEEeCcccCCCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCCCCChhhhhhcCCCcEEEeccCChhhhhcCCC
Q 011765 277 GSVVYVAFGSEAKPSQEELTEIALGLELSKLPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDS 356 (478)
Q Consensus 277 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~n~~~~~~vpq~~vL~~~~ 356 (478)
++.|-|-+||.+ +....++....|+..+.++=..+. .....|+... .|+-... -...+
T Consensus 7 ~~~V~IimgS~S--D~~v~~~a~~~L~~~gi~~ev~V~--------SaHR~p~~~~-----------~~~~~a~-~~g~~ 64 (174)
T 3lp6_A 7 RPRVGVIMGSDS--DWPVMADAAAALAEFDIPAEVRVV--------SAHRTPEAMF-----------SYARGAA-ARGLE 64 (174)
T ss_dssp CCSEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEEC--------CTTTCHHHHH-----------HHHHHHH-HHTCC
T ss_pred CCeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEE--------CCCCCHHHHH-----------HHHHHHH-hCCCC
Confidence 445777788766 777888888899999988644333 2334555322 2221111 12234
Q ss_pred ceeeeeccChh----hHHHHHHhCCcEecccccc---chhhHHHHHhhc--CeEEEe-eccCCCCcccHHHHHHHHHHHh
Q 011765 357 VGGFLTHAGWS----SVVEALQFGMPLIVLTCYA---DQGLNAKLLEEK--QIVELI-PRDEGDGFFTRNSVAESLRLVL 426 (478)
Q Consensus 357 ~~~~ItHgG~~----s~~eal~~GvP~l~~P~~~---DQ~~na~~v~~~--g~G~~l-~~~~~~~~~~~~~l~~~i~~ll 426 (478)
+ ||.=+|.. ++..++ .-+|+|.+|... +..+--.-+.+. |+.+.. .+.. -.++..++..|-.+
T Consensus 65 V--iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~daLlS~vqmp~GvpVatV~I~~---~~nAa~lAa~Il~~- 137 (174)
T 3lp6_A 65 V--IIAGAGGAAHLPGMVAAA-TPLPVIGVPVPLGRLDGLDSLLSIVQMPAGVPVATVSIGG---AGNAGLLAVRMLGA- 137 (174)
T ss_dssp E--EEEEEESSCCHHHHHHHH-CSSCEEEEEECCSSGGGHHHHHHHHCCCTTCCCEECCTTC---HHHHHHHHHHHHHT-
T ss_pred E--EEEecCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHHhhCCCCCeeEEEEcCc---chHHHHHHHHHHhC-
Confidence 4 78776653 444443 568999999752 222223334444 543322 2111 14666666555433
Q ss_pred cccchHHHHHHHHHHHHHhcc
Q 011765 427 VEEKGQIYRDKAKEMKGLFGD 447 (478)
Q Consensus 427 ~~~~~~~~~~~a~~~~~~~~~ 447 (478)
. |+.++++++.+++...+
T Consensus 138 ~---d~~l~~kl~~~r~~~~~ 155 (174)
T 3lp6_A 138 A---NPQLRARIVAFQDRLAD 155 (174)
T ss_dssp T---CHHHHHHHHHHHHHHHH
T ss_pred C---CHHHHHHHHHHHHHHHH
Confidence 3 68899999999888753
|
| >1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A | Back alignment and structure |
|---|
Probab=81.66 E-value=3.1 Score=38.52 Aligned_cols=36 Identities=17% Similarity=0.144 Sum_probs=25.7
Q ss_pred CCccEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 011765 4 NSKLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPR 44 (478)
Q Consensus 4 ~~~~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~ 44 (478)
|++|||+|+..+.. .....++|.+.||+|..+.+..
T Consensus 1 s~~mrIvf~Gt~~f-----a~~~L~~L~~~~~~i~~Vvt~p 36 (314)
T 1fmt_A 1 SESLRIIFAGTPDF-----AARHLDALLSSGHNVVGVFTQP 36 (314)
T ss_dssp CCCCEEEEEECSHH-----HHHHHHHHHHTTCEEEEEECCC
T ss_pred CCCCEEEEEecCHH-----HHHHHHHHHHCCCcEEEEEeCC
Confidence 46899999987643 2445577777899998666643
|
| >2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A | Back alignment and structure |
|---|
Probab=81.54 E-value=5.5 Score=35.44 Aligned_cols=112 Identities=19% Similarity=0.200 Sum_probs=61.1
Q ss_pred ccEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCCCCCCCCccccC-CCC
Q 011765 6 KLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVDNLRENAEATI-DLP 84 (478)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~~~-~~~ 84 (478)
.||||+.-==+. |---+..|+++|++.| +|+++.+...+.-+...- .+...+.+..+. . ...... ..+
T Consensus 1 ~M~ILlTNDDGi-~apGi~aL~~~L~~~g-~V~VVAP~~~~Sg~g~ai-Tl~~Pl~~~~~~----~----~~~~v~~GTP 69 (254)
T 2v4n_A 1 SMRILLSNDDGV-HAPGIQTLAKALREFA-DVQVVAPDRNRSGASNSL-TLESSLRTFTFD----N----GDIAVQMGTP 69 (254)
T ss_dssp CCEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTCTTCC-CCSSCCEEEECT----T----SCEEEETCCH
T ss_pred CCeEEEEcCCCC-CCHHHHHHHHHHHhCC-cEEEEeeCCCCcCccCCc-CCCCCeEEEEeC----C----CCeEECCCCH
Confidence 478887754444 3344778899998876 999999988765443321 112224443331 0 001111 111
Q ss_pred hhHHHHHHHHHhhhhHHHHHHHhhcCCCEEEEcC----------Ccc---cHHHHHHHhCCCeEEEec
Q 011765 85 YDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDF----------AAY---WLPARARELGIPSGFFSI 139 (478)
Q Consensus 85 ~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~----------~~~---~~~~~A~~lgIP~i~~~~ 139 (478)
. +...-.+..++ ..+||+||+.. +.+ .|++-|..+|||.|.++.
T Consensus 70 a----------DCV~lal~~ll-~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 126 (254)
T 2v4n_A 70 T----------DCVYLGVNALM-RPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSL 126 (254)
T ss_dssp H----------HHHHHHHHTTS-SSCCSEEEEEEEESCCCGGGGGGCHHHHHHHTTTTSSSCEEEEEE
T ss_pred H----------HHHHHHHhhcc-CCCCCEeeeCCcCCCCCCCCeeccHHHHHHHHHHhcCCCeEEEec
Confidence 1 11222333444 45899999753 222 233334668999999865
|
| >1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A* | Back alignment and structure |
|---|
Probab=81.17 E-value=2 Score=37.08 Aligned_cols=45 Identities=11% Similarity=0.122 Sum_probs=38.7
Q ss_pred ccEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCC
Q 011765 6 KLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRL 52 (478)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~ 52 (478)
++||++.-.++.+-+. ...|.+.|+++| +|.++.++...+++...
T Consensus 19 ~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~V~vv~T~~A~~fv~~~ 63 (209)
T 1mvl_A 19 KPRVLLAASGSVAAIK-FGNLCHCFTEWA-EVRAVVTKSSLHFLDKL 63 (209)
T ss_dssp CCEEEEEECSSGGGGG-HHHHHHHHHTTS-EEEEEECTGGGGTCCGG
T ss_pred CCEEEEEEeCcHHHHH-HHHHHHHHhcCC-CEEEEEcchHHHhcCHH
Confidence 5789998888887666 899999999999 99999999888777654
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 478 | ||||
| d2vcha1 | 471 | c.87.1.10 (A:6-476) Hydroquinone glucosyltransfera | 6e-74 | |
| d2pq6a1 | 473 | c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransfe | 2e-65 | |
| d2c1xa1 | 450 | c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-gluc | 3e-61 | |
| d2acva1 | 461 | c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transf | 2e-58 | |
| d1rrva_ | 401 | c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Am | 2e-35 | |
| d1iira_ | 401 | c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycol | 5e-31 | |
| d1pn3a_ | 391 | c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA | 1e-21 |
| >d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 471 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Hydroquinone glucosyltransferase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 238 bits (607), Expect = 6e-74
Identities = 132/476 (27%), Positives = 199/476 (41%), Gaps = 31/476 (6%)
Query: 9 IAMFPWLAFGHMIPWLELAK-LIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISL 67
+A+ P GH+IP +E AK L+ G + F+ + + + L
Sbjct: 4 VAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLDSLPSSISSVFL 63
Query: 68 PHVDNLRENAEATIDLPYDEVKYLKQSFDCLEEPMAKLLQSLA-PDWLLFDFAAYWLPAR 126
P VD + ++ + + +S L + ++ P L+ D
Sbjct: 64 PPVDL--TDLSSSTRIESRISLTVTRSNPELRKVFDSFVEGGRLPTALVVDLFGTDAFDV 121
Query: 127 ARELGIPSGFFSIFTAATLGYFGPSSVLINDSGDHLKTPEDYTRVPNWVSFPTTISYRLF 186
A E +P F TA L +F L + + +P V
Sbjct: 122 AVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSCEFRELTEPLMLPGCVPVAGKDFLDPA 181
Query: 187 EARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQ--LHRKPVIP 244
+ R + + K + + V + E EP +K L++ L + PV P
Sbjct: 182 QDR--------KDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPGLDKPPVYP 233
Query: 245 VGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLEL 304
VG L E +WLD Q GSV+YV+FGS + E+L E+ALGL
Sbjct: 234 VGPLVNIGKQEAKQTEESECL---KWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLAD 290
Query: 305 SKLPFFWVLKKRLGQADTEPIE----------LPDGFEERTRGRGVVYTSWAPQLAILAH 354
S+ F WV++ G A++ + LP GF ERT+ RG V WAPQ +LAH
Sbjct: 291 SEQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAH 350
Query: 355 DSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFT 414
S GGFLTH GW+S +E++ G+PLI YA+Q +NA LL E L PR DG
Sbjct: 351 PSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDGLVR 410
Query: 415 RNSVAESLRLVLVEEKGQIYRDKAKEMKGLF----GDKGRHDRYVDNFLNYLKNHR 466
R VA ++ ++ E+G+ R+K KE+K D G + + K H+
Sbjct: 411 REEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVALKWKAHK 466
|
| >d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]} Length = 473 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: (Iso)flavonoid glycosyltransferase species: Medicago truncatula [TaxId: 3880]
Score = 216 bits (550), Expect = 2e-65
Identities = 99/477 (20%), Positives = 180/477 (37%), Gaps = 33/477 (6%)
Query: 9 IAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLP 68
+ M P+ GH+ P +LAKL+ +G I F++T N RL + + + F +
Sbjct: 4 VVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLK-SRGPKAFDGFTDFNFE 62
Query: 69 HVDNLRENAEATIDLPYDEVKYLKQSFDCLEEPMAKLL-------QSLAPDWLLFDFAAY 121
+ + E D+ D + +P +LL L+ D
Sbjct: 63 SIPDGLTPMEGDGDVSQDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMS 122
Query: 122 WLPARARELGIPSGFFSIFTAATLGYFGPSSVLINDSGDHLKTPEDYTRVPNW---VSFP 178
+ A E +P+ + +A +L + K T P
Sbjct: 123 FTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVERGIIPFKDESYLTNGCLETKVDWIP 182
Query: 179 TTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLH 238
++RL + ++ + + + + + E E + + L
Sbjct: 183 GLKNFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESDVINALSSTI 242
Query: 239 RK---------PVIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAK 289
+ Q+ + + DT +WL+ +E GSVVYV FGS
Sbjct: 243 PSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTE--CLDWLESKEPGSVVYVNFGSTTV 300
Query: 290 PSQEELTEIALGLELSKLPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQL 349
+ E+L E A GL K F W+++ L + F RG++ + W PQ
Sbjct: 301 MTPEQLLEFAWGLANCKKSFLWIIRPDLVIGG--SVIFSSEFTNEIADRGLIAS-WCPQD 357
Query: 350 AILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEG 409
+L H S+GGFLTH GW+S E++ G+P++ +ADQ + + + + + + E
Sbjct: 358 KVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGM----EI 413
Query: 410 DGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLF----GDKGRHDRYVDNFLNYL 462
D R +A+ + V+ +KG+ + KA E+K G ++ + +
Sbjct: 414 DTNVKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKVIKDV 470
|
| >d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]} Length = 450 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: UDP glucose:flavonoid 3-o-glucosyltransferase species: Grape (Vitis vinifera) [TaxId: 29760]
Score = 204 bits (520), Expect = 3e-61
Identities = 99/467 (21%), Positives = 181/467 (38%), Gaps = 31/467 (6%)
Query: 9 IAMFPWLAFGHMIPWLELAKLIAQKGHKI---FFISTPRNIDRLPRLPQNLASMIQFVKI 65
+A+ + H P L + + +A FF ++ N + I+ I
Sbjct: 4 VAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMHTMQCNIKSYDI 63
Query: 66 SLPHVDNLRENAEATIDLPYDEVKYLKQSFDCLEEPMAKLLQSLA--PDWLLFDFAAYWL 123
S D + E D + + + + + M + L+ D ++
Sbjct: 64 S----DGVPEGYVFAGRPQEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFA 119
Query: 124 PARARELGIPSGFFSIFTAATLGYFGPSSVLINDSGDHLKTPEDYTRVPNWVSFPTTISY 183
A E+G+ F +L + G + + P
Sbjct: 120 ADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIGVSGIQGREDELLNFI---PGMSKV 176
Query: 184 RLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLHRKPVI 243
R + ++ + +R GQ L V + S E + L+ + +
Sbjct: 177 RFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLKSKLKTYLN 236
Query: 244 PVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLE 303
T + WL E++ SVVY++FG+ P E+ ++ LE
Sbjct: 237 IGPFNLITPPPVVPNTTGCLQ-----WLKERKPTSVVYISFGTVTTPPPAEVVALSEALE 291
Query: 304 LSKLPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTH 363
S++PF W L+ D + LP+GF E+TRG G+V WAPQ +LAH++VG F+TH
Sbjct: 292 ASRVPFIWSLR------DKARVHLPEGFLEKTRGYGMVVP-WAPQAEVLAHEAVGAFVTH 344
Query: 364 AGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLR 423
GW+S+ E++ G+PLI + DQ LN +++E+ + + G FT++ +
Sbjct: 345 CGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIE---GGVFTKSGLMSCFD 401
Query: 424 LVLVEEKGQIYRDKAKEMKGLF----GDKGRHDRYVDNFLNYLKNHR 466
+L +EKG+ R+ + ++ G KG ++ + +
Sbjct: 402 QILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVSKPK 448
|
| >d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]} Length = 461 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Triterpene UDP-glucosyl transferase UGT71G1 species: Medicago truncatula [TaxId: 3880]
Score = 197 bits (501), Expect = 2e-58
Identities = 108/480 (22%), Positives = 181/480 (37%), Gaps = 37/480 (7%)
Query: 1 MAD-NSKLQIAMFPWLAFGHMIPWLELAKLIAQKGH--KIFFISTPRNIDRLPR--LPQN 55
M+D N ++ P GH+ LE AKL+ I +
Sbjct: 1 MSDINKNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSV 60
Query: 56 LASMIQFVKISLPHVDNLRENAEATIDLPYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLL 115
LAS Q I LP + E + + +L+ ++ + +L + L+
Sbjct: 61 LASQPQIQLIDLP--EVEPPPQELLKSPEFYILTFLESLIPHVKATIKTILSN-KVVGLV 117
Query: 116 FDFAAYWLPARARELGIPSGFFSIFTAATLG-YFGPSSVLINDSGDHLKTPEDYTRVPNW 174
DF + E GIPS F L + I + D +P
Sbjct: 118 LDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIEEVFDDSDRDHQLLNIPGI 177
Query: 175 VSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLL 234
+ + D + + Y+ + + + V + + E + L
Sbjct: 178 --------SNQVPSNVLPDACFNKDGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDAL 229
Query: 235 EQLHRK--PVIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVA-FGSEAKPS 291
K P+ VG L G + + I +WLDEQ SVV++
Sbjct: 230 YDHDEKIPPIYAVGPLLDLKGQPNPKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFG 289
Query: 292 QEELTEIALGLELSKLPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTS-WAPQLA 350
++ EIALGL+ S + F W E P+GF E G WAPQ+
Sbjct: 290 PSQIREIALGLKHSGVRFLWSNSA-------EKKVFPEGFLEWMELEGKGMICGWAPQVE 342
Query: 351 ILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVEL---IPRD 407
+LAH ++GGF++H GW+S++E++ FG+P++ YA+Q LNA L ++ V L +
Sbjct: 343 VLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYR 402
Query: 408 EGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLF----GDKGRHDRYVDNFLNYLK 463
+G + + L+ ++ +K I K +EMK + D G V ++ +
Sbjct: 403 KGSDVVAAEEIEKGLKDLM--DKDSIVHKKVQEMKEMSRNAVVDGGSSLISVGKLIDDIT 460
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} Length = 401 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Score = 134 bits (336), Expect = 2e-35
Identities = 55/440 (12%), Positives = 118/440 (26%), Gaps = 58/440 (13%)
Query: 7 LQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKIS 66
+++ + G + + LA + G + + P +RL + + V +
Sbjct: 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAEVG------VPHVPVG 54
Query: 67 LPHVDNLRENAEATIDLPYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFD-FAAYWLPA 125
LP L+E P +E + + + + + + A + D AA + +
Sbjct: 55 LPQHMMLQEGMPP--PPPEEEQRLAAMTVEMQFDAVPGAAEGCAAVVAVGDLAAATGVRS 112
Query: 126 RARELGIPSGFFSIFTAATLGYFGPSSVLINDSGDHLKTPEDYTRVPNWVSFPTTISYRL 185
A +LG+P + P + + + F L
Sbjct: 113 VAEKLGLPFFYSVPSPVYLASPHLPPAYDEPTTPGVTDIRVLWEERAAR--FADRYGPTL 170
Query: 186 FEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLHRKPVIPV 245
R + ++ L +
Sbjct: 171 NRRRAEIGLPPVEDVFGYG----------------HGERPLLAADPVLAPLQPDVDAVQT 214
Query: 246 GQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELS 305
G + V++ FGS + + ++A+ +
Sbjct: 215 GAWL-----LSDERPLPPEL----EAFLAAGSPPVHIGFGSSSGRGIADAAKVAVEAIRA 265
Query: 306 KLPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAG 365
+ + + G + + D A+ V + H
Sbjct: 266 QGRRVILSR---GWTELVLPDDRDD---------CFAIDEVNFQALFRR--VAAVIHHGS 311
Query: 366 WSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLV 425
+ A + G+P +V+ DQ A + I T S++ +L V
Sbjct: 312 AGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPT----PTFESLSAALTTV 367
Query: 426 LVEEKGQIYRDKAKEMKGLF 445
L E R +A+ + G+
Sbjct: 368 LAPE----TRARAEAVAGMV 383
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} Length = 401 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Score = 121 bits (304), Expect = 5e-31
Identities = 52/434 (11%), Positives = 104/434 (23%), Gaps = 59/434 (13%)
Query: 9 IAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLP 68
+ + + G P + LA + G + + P +RL + V +
Sbjct: 3 VLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLA------EVGVPHVPVGPS 56
Query: 69 HVDNLRENAEATIDLPYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLL-FDFAAYWLPARA 127
++ D ++ ++ + + + A AA + + A
Sbjct: 57 ARAPIQRAKP---LTAEDVRRFTTEAIATQFDEIPAAAEGCAAVVTTGLLAAAIGVRSVA 113
Query: 128 RELGIPSGFFSIFTAATLGYFGPSSVLINDSGDHLKTPEDYTRVPNWVSFPTTISYRLFE 187
+LGIP + + + P L P + +
Sbjct: 114 EKLGIPYFYAFHCPSYVPSPYYPP--------PPLGEPSTQDTIDIPAQWERNNQSAYQR 165
Query: 188 ARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLHRKPVIPVGQ 247
+ + ++ + D V + P
Sbjct: 166 YGGLLNSH--RDAIGLPPVEDIFTFGYTDHPWVAADPVLAP---------------LQPT 208
Query: 248 LPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELSKL 307
G + S + VY+ FGS P+ + +
Sbjct: 209 DLDAVQTGAWILPDERPLSPELAAFLDAGPPPVYLGFGSLGAPADA-VRVAIDAIRAHGR 267
Query: 308 PFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWS 367
G + V + H G
Sbjct: 268 RVILSRG-------------WADLVLPDDGADCFAIGEVNHQVLFGR--VAAVIHHGGAG 312
Query: 368 SVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLV 427
+ A + G P I+L ADQ A + E + T +S++ +L L
Sbjct: 313 TTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHDGPI----PTFDSLSAALATALT 368
Query: 428 EEKGQIYRDKAKEM 441
E +A +
Sbjct: 369 PE----THARATAV 378
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} Length = 391 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Score = 94.3 bits (233), Expect = 1e-21
Identities = 60/463 (12%), Positives = 127/463 (27%), Gaps = 79/463 (17%)
Query: 9 IAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLP 68
+ + + G P + LA + + G P ++R + + V +
Sbjct: 3 VLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAEVG------VPMVPVGRA 56
Query: 69 HVDNLRENAEATIDLPYDEVKYLKQSFDCLEEPMAKLLQSLAPDWL-LFDFAAYWLPARA 127
RE +LP + + + + + ++ AA + + A
Sbjct: 57 VRAGAREPG----ELPPGAAEVVTEVVAEWFDKVPAAIEGCDAVVTTGLLPAAVAVRSMA 112
Query: 128 RELGIPSGFFSIFTAATLGYFGPSSVLINDSGDHLKTPEDYTRVPNWVSFPTTISYRLFE 187
+LGIP + + +P+ S Y
Sbjct: 113 EKLGIPYRYTVLSPDH---------------------------LPSEQSQAERDMYNQGA 145
Query: 188 ARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLHRKPVIPVGQ 247
R D + S+ + + + WL L +G
Sbjct: 146 DRLFGDAV----------NSHRASIGLPPVEHLYDYGYTDQPWLAADPVLSPLRPTDLGT 195
Query: 248 LPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELSKL 307
+ T + + VYV FGS ++P+ + ++A+ +
Sbjct: 196 VQTGAWILPDERPLSAEL----EAFLAAGSTPVYVGFGSSSRPATADAAKMAIKAVRASG 251
Query: 308 PFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWS 367
+ + G AD + + V + H
Sbjct: 252 RRIVLSR---GWADLVLPDDGA---------DCFVVGEVNLQELFGR--VAAAIHHDSAG 297
Query: 368 SVVEALQFGMPLIVLTCYAD----QGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLR 423
+ + A++ G+P IV+ D Q +A + E + + T +S++ +L
Sbjct: 298 TTLLAMRAGIPQIVVRRVVDNVVEQAYHADRVAELGVGVAVDGPV----PTIDSLSAALD 353
Query: 424 LVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLKNHR 466
L E R +A + G + + +
Sbjct: 354 TALAPE----IRARATTVADTIRADG-TTVAAQLLFDAVSLEK 391
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 478 | |||
| d2c1xa1 | 450 | UDP glucose:flavonoid 3-o-glucosyltransferase {Gra | 100.0 | |
| d2pq6a1 | 473 | (Iso)flavonoid glycosyltransferase {Medicago trunc | 100.0 | |
| d2vcha1 | 471 | Hydroquinone glucosyltransferase {Thale cress (Ara | 100.0 | |
| d2acva1 | 461 | Triterpene UDP-glucosyl transferase UGT71G1 {Medic | 100.0 | |
| d1rrva_ | 401 | TDP-vancosaminyltransferase GftD {Amycolatopsis or | 100.0 | |
| d1iira_ | 401 | UDP-glucosyltransferase GtfB {Amycolatopsis orient | 100.0 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 100.0 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 99.94 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.32 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 99.1 | |
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 98.97 | |
| d1o6ca_ | 377 | UDP-N-acetylglucosamine 2-epimerase {Bacillus subt | 98.9 | |
| d1v4va_ | 373 | UDP-N-acetylglucosamine 2-epimerase {Thermus therm | 98.76 | |
| d1f6da_ | 376 | UDP-N-acetylglucosamine 2-epimerase {Escherichia c | 98.69 | |
| d2f9fa1 | 166 | First mannosyl transferase WbaZ {Archaeoglobus ful | 97.95 | |
| d1pswa_ | 348 | ADP-heptose LPS heptosyltransferase II {Escherichi | 97.35 | |
| d2bfwa1 | 196 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 96.88 | |
| d1xmpa_ | 155 | N5-CAIR mutase (phosphoribosylaminoimidazole carbo | 92.94 | |
| d1j9ja_ | 247 | SurE homolog TM1662 {Thermotoga maritima [TaxId: 2 | 92.3 | |
| d1u11a_ | 159 | N5-CAIR mutase (phosphoribosylaminoimidazole carbo | 91.94 | |
| d1o4va_ | 169 | N5-CAIR mutase (phosphoribosylaminoimidazole carbo | 90.79 | |
| d1gsoa2 | 105 | Glycinamide ribonucleotide synthetase (GAR-syn), N | 88.86 | |
| d1uqta_ | 456 | Trehalose-6-phosphate synthase, OtsA {Escherichia | 85.0 | |
| d1j6ua1 | 89 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 84.53 | |
| d1qcza_ | 163 | N5-CAIR mutase (phosphoribosylaminoimidazole carbo | 84.28 | |
| d1ccwa_ | 137 | Glutamate mutase, small subunit {Clostridium cochl | 83.17 | |
| d1u7za_ | 223 | Coenzyme A biosynthesis bifunctional protein CoaBC | 81.26 | |
| d1gsaa1 | 122 | Prokaryotic glutathione synthetase, N-terminal dom | 80.03 |
| >d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: UDP glucose:flavonoid 3-o-glucosyltransferase species: Grape (Vitis vinifera) [TaxId: 29760]
Probab=100.00 E-value=1.1e-52 Score=422.23 Aligned_cols=433 Identities=21% Similarity=0.313 Sum_probs=300.7
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCccc---cCCCCCCCCCCCeEEEEecCCCCCCCCCCccccCCC
Q 011765 7 LQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNID---RLPRLPQNLASMIQFVKISLPHVDNLRENAEATIDL 83 (478)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~---~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~~~~~ 83 (478)
.||+|+|+|++||++|++.||++|++|||+|||++...... ............+.+..++ ++++.+.....+.
T Consensus 2 ~hvl~~p~P~~gH~~p~l~la~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 77 (450)
T d2c1xa1 2 PHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMHTMQCNIKSYDIS----DGVPEGYVFAGRP 77 (450)
T ss_dssp CEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC-------CTTEEEEECC----CCCCTTCCCCCCT
T ss_pred CEEEEECchhHhHHHHHHHHHHHHHHCCCcEEEEEccCccchhhhhcccccccCCCceeeecC----CCCCcchhhccch
Confidence 49999999999999999999999999999999987543211 1111111122457777776 5665555444444
Q ss_pred ChhHHHHHHHHHhhhhHHHHHHHhh--cCCCEEEEcCCcccHHHHHHHhCCCeEEEecchHHHHHhhccccccccccCCC
Q 011765 84 PYDEVKYLKQSFDCLEEPMAKLLQS--LAPDWLLFDFAAYWLPARARELGIPSGFFSIFTAATLGYFGPSSVLINDSGDH 161 (478)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~l~~ll~~--~~pD~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (478)
......++......+.+.+.+++.. .+||+||+|.+..++..+|+++|+|++.++++++..................+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~~~~p~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (450)
T d2c1xa1 78 QEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIGVS 157 (450)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHHHHHCSS
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHhCCCCCeEEEECCccHHHHHHHHHhCCCEEEEecCchhhhhhhhcccccccccCCC
Confidence 4444445555555555556555543 58999999999999999999999999999988887665433221110000010
Q ss_pred CCCCCcccCCCcccccccccccchhhhhhhhhhhcCCccc-chhhhhhhccccCCcEEEEcCcCccChHHHHHHHhhcCC
Q 011765 162 LKTPEDYTRVPNWVSFPTTISYRLFEARKVFDILISDESN-VSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLHRK 240 (478)
Q Consensus 162 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~~~~~~~ 240 (478)
.. .........+.+.... .......... ........ ........+.....+....+++.++....+...+..++
T Consensus 158 ~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p- 232 (450)
T d2c1xa1 158 GI-QGREDELLNFIPGMSK--VRFRDLQEGI-VFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLKSKLK- 232 (450)
T ss_dssp CC-TTCTTCBCTTSTTCTT--CBGGGSCTTT-SSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHHHSS-
T ss_pred cc-ccccccccccCCcccc--hhHhhhhhhh-hcccchHHHHHHHHHHHhhhhcccccccccHHhhhhhhhhhccccCC-
Confidence 00 0000001111111100 0000000000 01111111 12333444556677888999999999888888777665
Q ss_pred CeeeeccCCCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccCCCHHHHHHHHHHHHhCCCCEEEEEecCCCCC
Q 011765 241 PVIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELSKLPFFWVLKKRLGQA 320 (478)
Q Consensus 241 ~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~ 320 (478)
++.++||+....... ..+..+++..|+...+.+++||+|+||......+++.+++.++++.+.+|+|+....
T Consensus 233 ~~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~v~~s~gs~~~~~~~~~~~~~~~~~~~~~~vl~~~~~~---- 304 (450)
T d2c1xa1 233 TYLNIGPFNLITPPP----VVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSLRDK---- 304 (450)
T ss_dssp CEEECCCHHHHC-------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEEECCGG----
T ss_pred ceeecCCccccCCCC----CCcchhhhccccccCCccceeeecccccccCCHHHHHHHHHHHHhcCCeEEEEECCC----
Confidence 577778765432211 033456688899998888899999999998889999999999999999999998754
Q ss_pred CCCCCCCChhhhhhcCCCcEEEeccCChhhhhcCCCceeeeeccChhhHHHHHHhCCcEeccccccchhhHHHHHhh-cC
Q 011765 321 DTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEE-KQ 399 (478)
Q Consensus 321 ~~~~~~~p~~~~~~~~~~n~~~~~~vpq~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~-~g 399 (478)
....+|+++..+. ..|+.+.+|+||.++|.|+++++||||||+||++||+++|||||++|++.||+.||+|+++ +|
T Consensus 305 --~~~~l~~~~~~~~-~~nv~~~~~~pq~~lL~hp~~~~fItHGG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G 381 (450)
T d2c1xa1 305 --ARVHLPEGFLEKT-RGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLE 381 (450)
T ss_dssp --GGGGSCTTHHHHH-TTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSC
T ss_pred --ccccCChhhhhhc-cccccccccCChHhhhccCceeEEEccCCccHHHHHHHcCCCEEecccccchHHHHHHHHHHcC
Confidence 3345665544332 3588999999999999999999999999999999999999999999999999999999987 59
Q ss_pred eEEEeeccCCCCcccHHHHHHHHHHHhcccchHHHH---HHHHHHHHHh----cccCChHHHHHHHHHHHHhcc
Q 011765 400 IVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYR---DKAKEMKGLF----GDKGRHDRYVDNFLNYLKNHR 466 (478)
Q Consensus 400 ~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~---~~a~~~~~~~----~~~~~~~~~~~~i~~~~~~~~ 466 (478)
+|+.++..+ +|+++|.++|+++|+ |++|+ +|+++|++.. .++|++.+++..++|++.++|
T Consensus 382 ~G~~l~~~~----~t~~~l~~ai~~vL~---d~~y~~~~~r~~~l~~~~~~a~~~~gss~~~~~~~~e~v~r~~ 448 (450)
T d2c1xa1 382 IGVRIEGGV----FTKSGLMSCFDQILS---QEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVSKPK 448 (450)
T ss_dssp CEEECGGGS----CCHHHHHHHHHHHHH---SHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHTSCC
T ss_pred cEEEecCCC----cCHHHHHHHHHHHhc---CcHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhhhc
Confidence 999999988 999999999999999 77665 6777776654 356667888999999997765
|
| >d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: (Iso)flavonoid glycosyltransferase species: Medicago truncatula [TaxId: 3880]
Probab=100.00 E-value=3.6e-50 Score=405.51 Aligned_cols=441 Identities=23% Similarity=0.338 Sum_probs=293.0
Q ss_pred ccEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCC----CCCCeEEEEecCCCCCCCCCCccccC
Q 011765 6 KLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQN----LASMIQFVKISLPHVDNLRENAEATI 81 (478)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~----~~~~i~~~~i~~~~~~~l~~~~~~~~ 81 (478)
|.||+++|+|++||++|+++||++|++|||+|||++++.+...+.+.+.. ....+.+..++ +.+...... .
T Consensus 1 ~~hvl~~p~p~~gH~~P~~~lA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~-~ 75 (473)
T d2pq6a1 1 KPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIP----DGLTPMEGD-G 75 (473)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEEC----CCCC-------
T ss_pred CCEEEEECchhhhHHHHHHHHHHHHHHCCCeEEEEeCcchHhHHhhccCcccccCCCCcceeecC----CCCcccccc-c
Confidence 57999999999999999999999999999999999998777766655421 12346666665 333322111 1
Q ss_pred CCChhHHHHHHHHHhhh-------hHHHHHHHhhcCCCEEEEcCCcccHHHHHHHhCCCeEEEecchHHHHHhhcccccc
Q 011765 82 DLPYDEVKYLKQSFDCL-------EEPMAKLLQSLAPDWLLFDFAAYWLPARARELGIPSGFFSIFTAATLGYFGPSSVL 154 (478)
Q Consensus 82 ~~~~~~~~~~~~~~~~~-------~~~l~~ll~~~~pD~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~ 154 (478)
.........+......+ ...+....+...+|+||.|.+..++..+|+++++|++.+++..+.....+.+....
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~a~~~~~p~~~~~~~~~~~~~~~~~~~~~ 155 (473)
T d2pq6a1 76 DVSQDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSF 155 (473)
T ss_dssp ---CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHHH
T ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeEEEecCcchhhHHHHHHhCCCceeeccccchhhhhhhccccc
Confidence 11222223333322222 22233334455789999999999999999999999999988877665544333211
Q ss_pred ccccCCCCC-----CCCcccCCCcccccccccccchhhhhhhhhhhcCCcccchhhhhhhccccCCcEEEEcCcCccChH
Q 011765 155 INDSGDHLK-----TPEDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPE 229 (478)
Q Consensus 155 ~~~~~~~~~-----~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~ 229 (478)
......+.. .......+..++|.... ....+...+..................+..+..+..+.+++.+.+..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (473)
T d2pq6a1 156 VERGIIPFKDESYLTNGCLETKVDWIPGLKN--FRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESD 233 (473)
T ss_dssp HHTTCSSCSSGGGGTSSGGGCBCCSSTTCCS--CBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESSCGGGGHH
T ss_pred ccccCCCccccccccccccccccccCCCccc--cchhhhhhhhhhcchhHHHHHHHHHHHHHHHhhhcccccchhhhhHh
Confidence 111111111 01111122223332111 11111112221112222233555566667778889999999999888
Q ss_pred HHHHHHhhcCCCeeeeccCCCCCCCC--------CCCCCCCChhhHhhhcccCCCCceEEEEeCcccCCCHHHHHHHHHH
Q 011765 230 WLKLLEQLHRKPVIPVGQLPTTTGDG--------DSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALG 301 (478)
Q Consensus 230 ~~~~~~~~~~~~~~~vGp~~~~~~~~--------~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a 301 (478)
....+....+ ...+.++........ ..........+...|+.......++|+++||......+....++.+
T Consensus 234 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~gs~~~~~~~~~~~~~~~ 312 (473)
T d2pq6a1 234 VINALSSTIP-SIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPEQLLEFAWG 312 (473)
T ss_dssp HHHHHHTTCT-TEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCCHHHHHHHHHH
T ss_pred HHHHHHhcCC-cccccCCccccCCCCCCccccccCCcccccccHHHHHHhhhcCCCceeeeccCccccccHHHHHHHHHH
Confidence 7776655544 344444333210000 0000023345677788888778899999999999899999999999
Q ss_pred HHhCCCCEEEEEecCCCCCCCCCCCCChhhhhhcCCCcEEEeccCChhhhhcCCCceeeeeccChhhHHHHHHhCCcEec
Q 011765 302 LELSKLPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIV 381 (478)
Q Consensus 302 l~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~n~~~~~~vpq~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~ 381 (478)
+++++.+++|+++..... .....+|+++... ...|+++.+|+||.++|.|+++++||||||+||++||+++|||||+
T Consensus 313 ~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~-~~~Nv~~~~~~Pq~~lL~hp~~~~fItHGG~~s~~Eal~~GVP~lv 389 (473)
T d2pq6a1 313 LANCKKSFLWIIRPDLVI--GGSVIFSSEFTNE-IADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLC 389 (473)
T ss_dssp HHHTTCEEEEECCGGGST--TTGGGSCHHHHHH-HTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEE
T ss_pred HHhcCCeEEEEEccCCcc--cccccCcccchhh-ccCceEEeeeCCHHHHhcCCcCcEEEecCCccHHHHHHHcCCCEEe
Confidence 999999999998754321 0222344443322 3469999999999999999999999999999999999999999999
Q ss_pred cccccchhhHHHHHh-hcCeEEEeeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhcc----cCChHHHHH
Q 011765 382 LTCYADQGLNAKLLE-EKQIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFGD----KGRHDRYVD 456 (478)
Q Consensus 382 ~P~~~DQ~~na~~v~-~~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~----~~~~~~~~~ 456 (478)
+|++.||+.||+||+ ++|+|+.++. + +|.++|+++|+++|++++.++||+||++|++++++ +|++.++++
T Consensus 390 ~P~~~DQ~~na~rv~~~~G~G~~l~~-~----~t~~~l~~ai~~vl~d~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~~~ 464 (473)
T d2pq6a1 390 WPFFADQPTDCRFICNEWEIGMEIDT-N----VKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLN 464 (473)
T ss_dssp CCCSTTHHHHHHHHHHTSCCEEECCS-S----CCHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHH
T ss_pred ccchhhhHHHHHHHHHHcCeEEeeCC-C----cCHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 999999999999995 4699999985 4 89999999999999943334599999999999863 455688888
Q ss_pred HHHHHH
Q 011765 457 NFLNYL 462 (478)
Q Consensus 457 ~i~~~~ 462 (478)
.|++.+
T Consensus 465 ~~i~~~ 470 (473)
T d2pq6a1 465 KVIKDV 470 (473)
T ss_dssp HHHHHT
T ss_pred HHHHHH
Confidence 888865
|
| >d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Hydroquinone glucosyltransferase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=5.7e-49 Score=396.66 Aligned_cols=444 Identities=28% Similarity=0.370 Sum_probs=295.1
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHh-CCCeEEEEeCCCccccCCCCCC--CCCCCeEEEEecCCCCCCCCCCccccCCC
Q 011765 7 LQIAMFPWLAFGHMIPWLELAKLIAQ-KGHKIFFISTPRNIDRLPRLPQ--NLASMIQFVKISLPHVDNLRENAEATIDL 83 (478)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~La~~L~~-rGh~Vt~~~~~~~~~~~~~~g~--~~~~~i~~~~i~~~~~~~l~~~~~~~~~~ 83 (478)
.||+++|+|++||++|+++||++|++ |||+|||++++.+......... .....+....++. ..........+
T Consensus 2 ~hil~~p~p~~GH~~P~l~La~~L~~~rGH~Vt~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~- 76 (471)
T d2vcha1 2 PHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLDSLPSSISSVFLPP----VDLTDLSSSTR- 76 (471)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC-CCTTEEEEECCC----CCCTTSCTTCC-
T ss_pred CEEEEECchhHhHHHHHHHHHHHHHHccCCEEEEEeCCCcchhhhhhcccccCCCCcceeecCc----ccccccccccc-
Confidence 49999999999999999999999965 8999999998765543322111 1112344444431 11111111111
Q ss_pred ChhHHHHHHH-HHhhhhHHHHHHHhh-cCCCEEEEcCCcccHHHHHHHhCCCeEEEecchHHHHHhhccccccccccCCC
Q 011765 84 PYDEVKYLKQ-SFDCLEEPMAKLLQS-LAPDWLLFDFAAYWLPARARELGIPSGFFSIFTAATLGYFGPSSVLINDSGDH 161 (478)
Q Consensus 84 ~~~~~~~~~~-~~~~~~~~l~~ll~~-~~pD~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (478)
....+..+.. ....+......+.+. ..+|+||.|.+..++..+++.+|+|++.+++.+......+.+....... .+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~ 154 (471)
T d2vcha1 77 IESRISLTVTRSNPELRKVFDSFVEGGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDET--VS 154 (471)
T ss_dssp HHHHHHHHHHTTHHHHHHHHHHHHHTTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHHH--CC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeccchHHHHHHHHhCCCcccccccchhhHHHhhcCcccccc--cC
Confidence 1112222222 222233333444433 4689999999999999999999999999988776655433322100000 00
Q ss_pred CCCCCcccCCCcccccccccccchhhhhhhhhhhcCCcccchhhhhhhccccCCcEEEEcCcCccChHHHHHHHhhc--C
Q 011765 162 LKTPEDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLH--R 239 (478)
Q Consensus 162 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~~~~~--~ 239 (478)
....... .+..++... ...... ..........................+..+.+.+...+...+....... +
T Consensus 155 -~~~~~~~-~~~~~~~~~--~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (471)
T d2vcha1 155 -CEFRELT-EPLMLPGCV--PVAGKD--FLDPAQDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPGLDK 228 (471)
T ss_dssp -SCGGGCS-SCBCCTTCC--CBCGGG--SCGGGSCTTSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHHSCCTTC
T ss_pred -ccccccc-ccccccccc--cccccc--ccccccccchHHHHHHHHHHHhhcccccccchhHHHHHHHHHhhcccccCCC
Confidence 0000000 001111100 000000 0000111111122333344445556677788888888877655544433 2
Q ss_pred CCeeeeccCCCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccCCCHHHHHHHHHHHHhCCCCEEEEEecCCCC
Q 011765 240 KPVIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELSKLPFFWVLKKRLGQ 319 (478)
Q Consensus 240 ~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~ 319 (478)
+++.+++++....... .....++++..|++.....+++|+++|+........+..+..+++.++.+++|.+......
T Consensus 229 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (471)
T d2vcha1 229 PPVYPVGPLVNIGKQE---AKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRSPSGI 305 (471)
T ss_dssp CCEEECCCCCCCSCSC---C-----CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEECCCCSS
T ss_pred CCccCcccccccCccc---cccccchhHHHHHHhcCCccccccccccccCCCHHHHHHHHHHHHhhcCCeEEEecccccc
Confidence 3466666665432211 1145567899999999888999999999998888999999999999999999998765321
Q ss_pred C----------CCCCCCCChhhhhhcCCCcEEEeccCChhhhhcCCCceeeeeccChhhHHHHHHhCCcEeccccccchh
Q 011765 320 A----------DTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQG 389 (478)
Q Consensus 320 ~----------~~~~~~~p~~~~~~~~~~n~~~~~~vpq~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~ 389 (478)
. .+....+|+++......+|+++.+|+||.+||.|+++++||||||+||++||+++|||||++|+++||+
T Consensus 306 ~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~w~Pq~~lL~hp~~~~fVtHGG~gS~~EAl~~GvP~v~~P~~~DQ~ 385 (471)
T d2vcha1 306 ANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQK 385 (471)
T ss_dssp TTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHH
T ss_pred ccccccccccccchhhhCCchhhhhccCCCeeecccCCHHHHhcCccCCEEEecCCccHHHHHHHcCCCEEEcccccccH
Confidence 0 123445788888777889999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHhh-cCeEEEeeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhcc----cCChHHHHHHHHHHHHh
Q 011765 390 LNAKLLEE-KQIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFGD----KGRHDRYVDNFLNYLKN 464 (478)
Q Consensus 390 ~na~~v~~-~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~----~~~~~~~~~~i~~~~~~ 464 (478)
.||+||++ +|+|+.+...+ .+.+|+++|+++|+++|++++...||+||++|++++++ +|+|.++++.+++..++
T Consensus 386 ~nA~rv~e~lG~Gv~l~~~~-~~~~t~~~l~~ai~~vl~~~~~~~~r~ra~~l~e~~~~a~~~gG~s~~~~~~~~~~~~~ 464 (471)
T d2vcha1 386 MNAVLLSEDIRAALRPRAGD-DGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVALKWKA 464 (471)
T ss_dssp HHHHHHHHTTCCEECCCCCT-TSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHheeEEEEecCC-CCcCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Confidence 99999855 79999997654 34489999999999999944335699999999998874 66679999999998877
Q ss_pred ccc
Q 011765 465 HRC 467 (478)
Q Consensus 465 ~~~ 467 (478)
.+.
T Consensus 465 ~~~ 467 (471)
T d2vcha1 465 HKK 467 (471)
T ss_dssp HHH
T ss_pred hhH
Confidence 654
|
| >d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Triterpene UDP-glucosyl transferase UGT71G1 species: Medicago truncatula [TaxId: 3880]
Probab=100.00 E-value=5.1e-49 Score=395.95 Aligned_cols=439 Identities=23% Similarity=0.332 Sum_probs=295.8
Q ss_pred CCC-CCccEEEEecCCCccCHHHHHHHHHHHHhCCCeEE--EEeCCCccccCCCCC-C---CCCCCeEEEEecCCCCCCC
Q 011765 1 MAD-NSKLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIF--FISTPRNIDRLPRLP-Q---NLASMIQFVKISLPHVDNL 73 (478)
Q Consensus 1 ~~~-~~~~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt--~~~~~~~~~~~~~~g-~---~~~~~i~~~~i~~~~~~~l 73 (478)
|.+ ++..||+|+|+|++||++|++.||++|++|||+|| +++++.......+.+ . ...+++++..++ +..
T Consensus 1 ~~~~~~~~hil~~p~P~~GH~~P~l~lA~~L~~rGH~V~vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 76 (461)
T d2acva1 1 MSDINKNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQPQIQLIDLP----EVE 76 (461)
T ss_dssp CHHHHHCEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHHCSCTTEEEEECC----CCC
T ss_pred CCCCCCCCeEEEecChhhhHHHHHHHHHHHHHHCCCCeEEEEEeCCccchhhhhhcccccccCCCCeeEEECC----CCC
Confidence 444 33569999999999999999999999999999876 455554433332211 1 233568888887 444
Q ss_pred CCCccccCCCChhHHHHHHHHHhhhhHHHHHH---HhhcCCCEEEEcCCcccHHHHHHHhCCCeEEEecchHHHHHhhcc
Q 011765 74 RENAEATIDLPYDEVKYLKQSFDCLEEPMAKL---LQSLAPDWLLFDFAAYWLPARARELGIPSGFFSIFTAATLGYFGP 150 (478)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l---l~~~~pD~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~ 150 (478)
......... ....+....+.+.+.+.++ +...++|+||.|.+..++..+|+++++|++.+++..+.......+
T Consensus 77 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~d~~~~~~~~~a~~~~~p~~~~~~~~~~~~~~~~~ 152 (461)
T d2acva1 77 PPPQELLKS----PEFYILTFLESLIPHVKATIKTILSNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLS 152 (461)
T ss_dssp CCCGGGGGS----HHHHHHHHHHHTHHHHHHHHHHHCCTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHH
T ss_pred Cchhhhhhc----HHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEeccchHHHHHHHHhCCCeEEEecccchhhHHhhc
Confidence 333322222 1122223333333333333 344578999999999999999999999999999988776655443
Q ss_pred ccccccccCCCCCCCCcccCCCcccccccccccchhhhhhhhhhhcCCcccchhhhhhhccccCCcEEEEcCcCccChHH
Q 011765 151 SSVLINDSGDHLKTPEDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEW 230 (478)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~ 230 (478)
+... . ..+.............++....... .. .+...............+........+..+.+++..++...
T Consensus 153 ~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (461)
T d2acva1 153 LKNR--Q-IEEVFDDSDRDHQLLNIPGISNQVP--SN--VLPDACFNKDGGYIAYYKLAERFRDTKGIIVNTFSDLEQSS 225 (461)
T ss_dssp GGGS--C-TTCCCCCSSGGGCEECCTTCSSCEE--GG--GSCHHHHCTTTHHHHHHHHHHHHTTSSEEEESCCHHHHHHH
T ss_pred cccc--c-ccccccccccccccccccccccchh--hh--hhhhhhhccchhHHHHHHHHHhhhccccccccccccccchh
Confidence 3200 0 0111111111111111111100000 00 00001111111223333444555677888889988888776
Q ss_pred HHHHHhhc--CCCeeeeccCCCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccC-CCHHHHHHHHHHHHhCCC
Q 011765 231 LKLLEQLH--RKPVIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAK-PSQEELTEIALGLELSKL 307 (478)
Q Consensus 231 ~~~~~~~~--~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~-~~~~~~~~~~~al~~~~~ 307 (478)
...+.... .+++.++||.................+++..|++..+...++++++|+... ...+.+..++.+++..++
T Consensus 226 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (461)
T d2acva1 226 IDALYDHDEKIPPIYAVGPLLDLKGQPNPKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGV 305 (461)
T ss_dssp HHHHHHHCTTSCCEEECCCCCCSSCCCBTTBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTC
T ss_pred hhhhhhcccCCCCceeeccccccCCccCCCccccCcHHHHHHHhhCCccceeeeeccccccCCCHHHHHHHHHHHHhcCc
Confidence 66555543 357999999886543221111234566788999988877788888888765 567889999999999999
Q ss_pred CEEEEEecCCCCCCCCCCCCChhhhhh-cCCCcEEEeccCChhhhhcCCCceeeeeccChhhHHHHHHhCCcEecccccc
Q 011765 308 PFFWVLKKRLGQADTEPIELPDGFEER-TRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYA 386 (478)
Q Consensus 308 ~~i~~~~~~~~~~~~~~~~~p~~~~~~-~~~~n~~~~~~vpq~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~ 386 (478)
+++|+.... ....|+++.+. ..+.|..+..|.||.++|.|+.+++||||||+||++||+++|||||++|++.
T Consensus 306 ~~~~~~~~~-------~~~~~~~~~~~~~~~~n~~v~~~~pq~~~l~~p~~~~fItHGG~gs~~eAl~~GVP~l~~P~~~ 378 (461)
T d2acva1 306 RFLWSNSAE-------KKVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYA 378 (461)
T ss_dssp EEEEECCCC-------GGGSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCST
T ss_pred cEEEEeecc-------cccCCccchhhhccCCCeEEEecCCHHHHHhcccCCEEEecCCccHHHHHHHcCCCEEeCCccc
Confidence 999998753 22334443322 2356899999999999999999999999999999999999999999999999
Q ss_pred chhhHHHHH-hhcCeEEEeeccCC--CCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhc----ccCChHHHHHHHH
Q 011765 387 DQGLNAKLL-EEKQIVELIPRDEG--DGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFG----DKGRHDRYVDNFL 459 (478)
Q Consensus 387 DQ~~na~~v-~~~g~G~~l~~~~~--~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~----~~~~~~~~~~~i~ 459 (478)
||+.||+|+ +++|+|+.++.... .+.+|+++|+++|+++|++ ++.||+||++|+++++ ++|++.++++.++
T Consensus 379 DQ~~nA~rlve~~G~G~~l~~~~~~~~~~~t~~~l~~a~~~vl~~--d~~~r~~a~~l~~~~r~a~~~gg~s~~~~~~~~ 456 (461)
T d2acva1 379 EQQLNAFRLVKEWGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDK--DSIVHKKVQEMKEMSRNAVVDGGSSLISVGKLI 456 (461)
T ss_dssp THHHHHHHHHHTSCCEEESCSSCCTTCCCCCHHHHHHHHHHHTCT--TCTHHHHHHHHHHHHHHHTSTTSHHHHHHHHHH
T ss_pred chHHHHHHHHHHhCceEEeeccccccCCccCHHHHHHHHHHHhhC--CHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHH
Confidence 999999997 66799999976532 3348999999999999972 3569999999999876 3555788988888
Q ss_pred HHHH
Q 011765 460 NYLK 463 (478)
Q Consensus 460 ~~~~ 463 (478)
+.+.
T Consensus 457 ~~~~ 460 (461)
T d2acva1 457 DDIT 460 (461)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 8763
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Probab=100.00 E-value=4.8e-46 Score=367.37 Aligned_cols=385 Identities=14% Similarity=0.048 Sum_probs=271.1
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCCCCCCCCccccCCCChh
Q 011765 7 LQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVDNLRENAEATIDLPYD 86 (478)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~~~~~~~~ 86 (478)
|||+|+++|+.||++|+++||++|++|||+|||++++.+.+.+++.| +++++++.+........ ........
T Consensus 1 mrIl~~~~gt~Ghv~P~l~lA~~L~~rGh~V~~~t~~~~~~~v~~~g------~~~~~~~~~~~~~~~~~--~~~~~~~~ 72 (401)
T d1rrva_ 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAEVG------VPHVPVGLPQHMMLQEG--MPPPPPEE 72 (401)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHT------CCEEECSCCGGGCCCTT--SCCCCHHH
T ss_pred CeEEEECCCChhHHHHHHHHHHHHHHCCCEEEEEEChhhHHHHHHCC------CeEEEcCCcHHhhhccc--cccccHHH
Confidence 89999999999999999999999999999999999999999888887 88988864322111111 11122223
Q ss_pred HHHHHHHHHhhhhHHHHHHHhhcCCCEEEEcCCc-ccHHHHHHHhCCCeEEEecchHHHHHhhccccccccccCCCCCCC
Q 011765 87 EVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAA-YWLPARARELGIPSGFFSIFTAATLGYFGPSSVLINDSGDHLKTP 165 (478)
Q Consensus 87 ~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~-~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (478)
...........+.+.+.+.++..+||++|.|... .++..+|+.+++|++...+.+.........
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~a~~~~~p~~~~~~~~~~~~~~~~~--------------- 137 (401)
T d1rrva_ 73 EQRLAAMTVEMQFDAVPGAAEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLASPHLP--------------- 137 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSCCSSSC---------------
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcCchhhHHHHHHHHhCCCcccccccchhhcccccc---------------
Confidence 3334444445566677788888899999998644 456789999999999887765442111110
Q ss_pred CcccCCCccccccc-ccccchhhhh----hh--------hhhhcCCcccchhhhhhhccccCCcEEEEcCcCccChHHHH
Q 011765 166 EDYTRVPNWVSFPT-TISYRLFEAR----KV--------FDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLK 232 (478)
Q Consensus 166 ~~~~~~~~~~p~~~-~~~~~~~~~~----~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~ 232 (478)
+.+.+... .......... .+ ..+...+ +........... ......++....+.+.
T Consensus 138 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--- 205 (401)
T d1rrva_ 138 ------PAYDEPTTPGVTDIRVLWEERAARFADRYGPTLNRRRAEI--GLPPVEDVFGYG-HGERPLLAADPVLAPL--- 205 (401)
T ss_dssp ------CCBCSCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHT--TCCCCSCHHHHT-TCSSCEECSCTTTSCC---
T ss_pred ------cccccccccccchhhhhHHHHHHHHHhhhHHHHHHHHHHh--CCcccchhhhhc-cccchhhcchhhhccc---
Confidence 01111000 0000000000 00 0011111 111111222222 2222333444433321
Q ss_pred HHHhhcCCCeeeeccCCCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccCCCH-HHHHHHHHHHHhCCCCEEE
Q 011765 233 LLEQLHRKPVIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQ-EELTEIALGLELSKLPFFW 311 (478)
Q Consensus 233 ~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~-~~~~~~~~al~~~~~~~i~ 311 (478)
....++.++||+..+.. .+.+.++..|++... ++||+++||...... +....++++++..+..++|
T Consensus 206 ----~~~~~~~~~g~~~~~~~-------~~~~~~~~~~l~~~~--~~v~~~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (401)
T d1rrva_ 206 ----QPDVDAVQTGAWLLSDE-------RPLPPELEAFLAAGS--PPVHIGFGSSSGRGIADAAKVAVEAIRAQGRRVIL 272 (401)
T ss_dssp ----CSSCCCEECCCCCCCCC-------CCCCHHHHHHHHSSS--CCEEECCTTCCSHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred ----CCCCCeEEECCCccccc-------ccCCHHHHHhhccCC--CeEEEECCccccCCHHHHHHHHHHHHhhcCCeEEE
Confidence 23346889999886544 445677899998764 499999999886444 5566688899999999888
Q ss_pred EEecCCCCCCCCCCCCChhhhhhcCCCcEEEeccCChhhhhcCCCceeeeeccChhhHHHHHHhCCcEeccccccchhhH
Q 011765 312 VLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQGLN 391 (478)
Q Consensus 312 ~~~~~~~~~~~~~~~~p~~~~~~~~~~n~~~~~~vpq~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~n 391 (478)
+...... ....+|+ |+++.+|+||.++|+|+++ ||||||+||++||+++|||+|++|++.||+.|
T Consensus 273 ~~~~~~~----~~~~~~~---------~v~~~~~~p~~~ll~~~~~--~I~hgG~~t~~Eal~~GvP~l~~P~~~DQ~~n 337 (401)
T d1rrva_ 273 SRGWTEL----VLPDDRD---------DCFAIDEVNFQALFRRVAA--VIHHGSAGTEHVATRAGVPQLVIPRNTDQPYF 337 (401)
T ss_dssp ECTTTTC----CCSCCCT---------TEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSBTHHHH
T ss_pred ecccccc----ccccCCC---------CEEEEeccCcHHHhhhccE--EEecCCchHHHHHHHhCCCEEEecccccHHHH
Confidence 7664422 3344554 9999999999999999777 99999999999999999999999999999999
Q ss_pred HHHHhhcCeEEEeeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhcccCChHHHHHHHHHHHH
Q 011765 392 AKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLK 463 (478)
Q Consensus 392 a~~v~~~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~~ 463 (478)
|++++++|+|+.++..+ +|+++|+++|+++|+ + +|+++|+++++.++ .+|..++++.|++.++
T Consensus 338 a~~v~~~G~g~~l~~~~----~~~~~L~~ai~~vl~---~-~~r~~a~~~~~~~~-~~g~~~aa~~ie~~~~ 400 (401)
T d1rrva_ 338 AGRVAALGIGVAHDGPT----PTFESLSAALTTVLA---P-ETRARAEAVAGMVL-TDGAAAAADLVLAAVG 400 (401)
T ss_dssp HHHHHHHTSEEECSSSC----CCHHHHHHHHHHHTS---H-HHHHHHHHHTTTCC-CCHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCEEEcCcCC----CCHHHHHHHHHHHhC---H-HHHHHHHHHHHHHh-hcCHHHHHHHHHHHhC
Confidence 99999999999999987 999999999999997 4 69999999999886 4678889999988765
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=100.00 E-value=1.9e-44 Score=355.33 Aligned_cols=382 Identities=14% Similarity=0.063 Sum_probs=258.2
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCCCCCCCCccccCCC-Ch
Q 011765 7 LQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVDNLRENAEATIDL-PY 85 (478)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~~~~~-~~ 85 (478)
|||||+++|++||++|+++||++|+++||+|||++++...+.+.+.| ++|++++. ............ ..
T Consensus 1 mkil~~~~gt~Gh~~P~lala~~L~~~Gh~V~~~~~~~~~~~v~~~g------~~~~~i~~----~~~~~~~~~~~~~~~ 70 (401)
T d1iira_ 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAEVG------VPHVPVGP----SARAPIQRAKPLTAE 70 (401)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHTT------CCEEECCC-----------CCSCCCHH
T ss_pred CEEEEECCCChhHHHHHHHHHHHHHHCCCEEEEEeCcchHHHHHHcC------CeEEECCc----chhhhhhccccchHH
Confidence 89999999999999999999999999999999999999999998888 99998872 222211111111 11
Q ss_pred hHHHHHHHHHhhhhHHHHHHHhhcCCCEEEEcCCcc---cHHHHHHHhCCCeEEEecchHHHHHhhccccccccccCCCC
Q 011765 86 DEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAAY---WLPARARELGIPSGFFSIFTAATLGYFGPSSVLINDSGDHL 162 (478)
Q Consensus 86 ~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~~---~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (478)
............+...+.+..+ ..|.++.+.+.. ++..++..+++|+....+.+.........
T Consensus 71 ~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~------------ 136 (401)
T d1iira_ 71 DVRRFTTEAIATQFDEIPAAAE--GCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVPSPYYP------------ 136 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTT--TCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSCCSSSC------------
T ss_pred HHHHHHHHHHHHHHHHHHHHhh--cCcceEEeecchhHHHHHHHHHHhcccccccccccccccccccc------------
Confidence 2222222233333333333332 346666665443 45578999999999887654432111111
Q ss_pred CCCCcccCCCcccccccccccch-------hhhh---hhhh----hhcCCcccchhhhhhhccccCCcEEEEcCcCccCh
Q 011765 163 KTPEDYTRVPNWVSFPTTISYRL-------FEAR---KVFD----ILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEP 228 (478)
Q Consensus 163 ~~~~~~~~~~~~~p~~~~~~~~~-------~~~~---~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~ 228 (478)
....+.+....... .... .+.. ....+. .... .........+..++++...+++
T Consensus 137 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~ 204 (401)
T d1iira_ 137 ---------PPPLGEPSTQDTIDIPAQWERNNQSAYQRYGGLLNSHRDAIG--LPPV-EDIFTFGYTDHPWVAADPVLAP 204 (401)
T ss_dssp ---------CCC---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTT--CCCC-CCHHHHHHCSSCEECSCTTTSC
T ss_pred ---------ccccccccccchhcchhhhhhhhhHHHHHHHHHHHHHHHHhc--Cccc-hhhhhhcccchhhhcccccccC
Confidence 11111111000000 0000 0000 111110 0000 1111122355677888888776
Q ss_pred HHHHHHHhhcCCCeeeeccCCCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccCCCHHHHHHHHHHHHhCCCC
Q 011765 229 EWLKLLEQLHRKPVIPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELSKLP 308 (478)
Q Consensus 229 ~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~ 308 (478)
+ ...++....+|++..... .....+...|++... ++||+++|+.. .....+..++++++..+.+
T Consensus 205 ~------~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~--~~i~~~~~~~~-~~~~~~~~~~~al~~~~~~ 268 (401)
T d1iira_ 205 L------QPTDLDAVQTGAWILPDE-------RPLSPELAAFLDAGP--PPVYLGFGSLG-APADAVRVAIDAIRAHGRR 268 (401)
T ss_dssp C------CCCSSCCEECCCCCCCCC-------CCCCHHHHHHHHTSS--CCEEEECC----CCHHHHHHHHHHHHHTTCC
T ss_pred C------CCcccccccccCcccCcc-------cccCHHHHHhhccCC--CeEEEccCccc-cchHHHHHHHHHHHHcCCe
Confidence 5 445556777777665433 334555667777654 48999999987 4778889999999999999
Q ss_pred EEEEEecCCCCCCCCCCCCChhhhhhcCCCcEEEeccCChhhhhcCCCceeeeeccChhhHHHHHHhCCcEeccccccch
Q 011765 309 FFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQ 388 (478)
Q Consensus 309 ~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~n~~~~~~vpq~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ 388 (478)
++|+.+.... .....|+ |+++.+|+||.++|.|+++ ||||||+||++||+++|||+|++|++.||
T Consensus 269 ~~~~~~~~~~----~~~~~~~---------nv~~~~~~p~~~~l~~~~~--~V~hgG~~t~~Eal~~GvP~v~~P~~~DQ 333 (401)
T d1iira_ 269 VILSRGWADL----VLPDDGA---------DCFAIGEVNHQVLFGRVAA--VIHHGGAGTTHVAARAGAPQILLPQMADQ 333 (401)
T ss_dssp EEECTTCTTC----CCSSCGG---------GEEECSSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTH
T ss_pred EEEeccCCcc----ccccCCC---------CEEEEeccCHHHHHhhcCE--EEecCCchHHHHHHHhCCCEEEccccccH
Confidence 9998765422 3334444 9999999999999999887 99999999999999999999999999999
Q ss_pred hhHHHHHhhcCeEEEeeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHh
Q 011765 389 GLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLKN 464 (478)
Q Consensus 389 ~~na~~v~~~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~ 464 (478)
+.||++++++|+|+.++..+ +|+++|+++|+++|+ + +|++||+++++.++.. +..++++.|++.+.+
T Consensus 334 ~~na~~l~~~G~g~~l~~~~----~~~~~l~~ai~~~l~---~-~~~~~a~~~~~~~~~~-~~~~aa~~i~~~i~r 400 (401)
T d1iira_ 334 PYYAGRVAELGVGVAHDGPI----PTFDSLSAALATALT---P-ETHARATAVAGTIRTD-GAAVAARLLLDAVSR 400 (401)
T ss_dssp HHHHHHHHHHTSEEECSSSS----CCHHHHHHHHHHHTS---H-HHHHHHHHHHHHSCSC-HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCCEEEcCcCC----CCHHHHHHHHHHHhC---H-HHHHHHHHHHHHHHhc-ChHHHHHHHHHHHhc
Confidence 99999999999999999987 999999999999998 5 5999999999999864 556788888888753
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=100.00 E-value=4.5e-45 Score=359.14 Aligned_cols=381 Identities=13% Similarity=0.057 Sum_probs=261.4
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCCCCCCCCccccCCCChh
Q 011765 7 LQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVDNLRENAEATIDLPYD 86 (478)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~~~~~~~~ 86 (478)
|||+|.++++.||++|+++||++|++|||+|||++++.+.+.+++.| +.+++++... .............
T Consensus 1 mril~~~~gt~Ghi~P~laLA~~L~~rGh~V~~~~~~~~~~~v~~~g------~~~~~~~~~~----~~~~~~~~~~~~~ 70 (391)
T d1pn3a_ 1 MRVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAEVG------VPMVPVGRAV----RAGAREPGELPPG 70 (391)
T ss_dssp CEEEEEEESSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHT------CCEEECSSCS----SGGGSCTTCCCTT
T ss_pred CEEEEEcCCChhHHHHHHHHHHHHHHCCCEEEEEEChhhHhHHHHCC------CeEEECCccH----HHHhhChhhhhHH
Confidence 89999999999999999999999999999999999999999888887 9999887322 1111111111111
Q ss_pred HHHHHHHHHhhhhHHHHHHHhhcCCCEEEEcCCccc---HHHHHHHhCCCeEEEecchHHHHHhhccccccccccCCCCC
Q 011765 87 EVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAAYW---LPARARELGIPSGFFSIFTAATLGYFGPSSVLINDSGDHLK 163 (478)
Q Consensus 87 ~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~~~---~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (478)
....+......+.+.+.+.++ +||+||+|.+.++ +..+|+.+++|++.+..++........
T Consensus 71 ~~~~~~~~~~~~~~~l~~~~~--~~D~vi~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~~~-------------- 134 (391)
T d1pn3a_ 71 AAEVVTEVVAEWFDKVPAAIE--GCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSEQS-------------- 134 (391)
T ss_dssp CGGGHHHHHHHHHHHHHHHHT--TCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGGSC--------------
T ss_pred HHHHHHHHHHHHHHHHHHHhc--CCCeEEEcccCchHHHHHHHHHHcCCceEEeeccccccccccc--------------
Confidence 122222233333333444432 6999999976553 456899999999988765432111000
Q ss_pred CCCcccCCCcccccccccccchhhhh-hhhhhhcCCcccchhhhhhhccccCCcEEEEcCcCccChHHHHHHHhhcCCCe
Q 011765 164 TPEDYTRVPNWVSFPTTISYRLFEAR-KVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLHRKPV 242 (478)
Q Consensus 164 ~~~~~~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~~~~~~~~~ 242 (478)
................ .+........ ........... ..+...+...+.++.. ...+++.
T Consensus 135 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~l~~~~~~~~~------~~~~~~~ 195 (391)
T d1pn3a_ 135 ----------QAERDMYNQGADRLFGDAVNSHRASIG--LPPVEHLYDYG-YTDQPWLAADPVLSPL------RPTDLGT 195 (391)
T ss_dssp ----------HHHHHHHHHHHHHHTHHHHHHHHHTTS--CCCCCCHHHHH-HCSSCEECSCTTTSCC------CTTCCSC
T ss_pred ----------cchhhHHHHHHHHHHHHHHHHHHHHhc--Ccccccccccc-cccceeeccchhhhcc------CCCCCCe
Confidence 0000000000000000 0001111110 00011111111 1222344444444432 3455678
Q ss_pred eeeccCCCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccCCCH-HHHHHHHHHHHhCCCCEEEEEecCCCCCC
Q 011765 243 IPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQ-EELTEIALGLELSKLPFFWVLKKRLGQAD 321 (478)
Q Consensus 243 ~~vGp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~-~~~~~~~~al~~~~~~~i~~~~~~~~~~~ 321 (478)
+++||+..... ...+.++..|+...+ ++||+++|+...... +....++.++...+.+++|.......
T Consensus 196 ~~~g~~~~~~~-------~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--- 263 (391)
T d1pn3a_ 196 VQTGAWILPDE-------RPLSAELEAFLAAGS--TPVYVGFGSSSRPATADAAKMAIKAVRASGRRIVLSRGWADL--- 263 (391)
T ss_dssp CBCCCCCCCCC-------CCCCHHHHHHTTSSS--CCEEEECTTCCSTHHHHHHHHHHHHHHHTTCCEEEECTTTTC---
T ss_pred eeecCcccCcc-------ccCCHHHhhhhccCC--CeEEEeccccccccHHHHHHHHHHHHHhcCCEEEEecccccc---
Confidence 89999876543 344566777876654 489999999887554 55566889999999998887654321
Q ss_pred CCCCCCChhhhhhcCCCcEEEeccCChhhhhcCCCceeeeeccChhhHHHHHHhCCcEeccccccc----hhhHHHHHhh
Q 011765 322 TEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYAD----QGLNAKLLEE 397 (478)
Q Consensus 322 ~~~~~~p~~~~~~~~~~n~~~~~~vpq~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~D----Q~~na~~v~~ 397 (478)
.....+ +|+++.+|+||.++|+++++ ||||||+||++||+++|||+|++|+.+| |+.||+++++
T Consensus 264 -~~~~~~---------~~v~i~~~~p~~~ll~~a~~--~v~hgG~~t~~Eal~~G~P~v~~P~~~d~~~eQ~~nA~~l~~ 331 (391)
T d1pn3a_ 264 -VLPDDG---------ADCFVVGEVNLQELFGRVAA--AIHHDSAGTTLLAMRAGIPQIVVRRVVDNVVEQAYHADRVAE 331 (391)
T ss_dssp -CCSSCC---------TTCCEESSCCHHHHHTTSSC--EEEESCHHHHHHHHHHTCCEEEECSSCCBTTBCCHHHHHHHH
T ss_pred -ccccCC---------CCEEEecccCHHHHHhhccE--EEecCchHHHHHHHHhCCcEEEeccccCCcchHHHHHHHHHH
Confidence 223333 48999999999999999888 9999999999999999999999999888 9999999999
Q ss_pred cCeEEEeeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHhc
Q 011765 398 KQIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLKNH 465 (478)
Q Consensus 398 ~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~ 465 (478)
.|+|+.++..+ +|+++|+++|+++|+ + +|++||+++++.++. .|..++++.|++.+.+.
T Consensus 332 ~G~g~~l~~~~----~~~~~l~~~i~~~l~---~-~~r~~a~~~a~~~~~-~g~~~aa~~i~~~l~~~ 390 (391)
T d1pn3a_ 332 LGVGVAVDGPV----PTIDSLSAALDTALA---P-EIRARATTVADTIRA-DGTTVAAQLLFDAVSLE 390 (391)
T ss_dssp HTSEEEECCSS----CCHHHHHHHHHHHTS---T-THHHHHHHHGGGSCS-CHHHHHHHHHHHHHHHH
T ss_pred CCCEEEcCcCC----CCHHHHHHHHHHHhC---H-HHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHhc
Confidence 99999999887 999999999999998 4 599999999999864 68899999999998764
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=99.94 E-value=2.3e-25 Score=214.42 Aligned_cols=337 Identities=16% Similarity=0.063 Sum_probs=192.2
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCcc--ccCCCCCCCCCCCeEEEEecCCCCCCCCCCccccCCCC
Q 011765 7 LQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNI--DRLPRLPQNLASMIQFVKISLPHVDNLRENAEATIDLP 84 (478)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~--~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~~~~~~~~ 84 (478)
.||++++.++-||+.|+++|+++|.++||+|+|+++.... +.+...+ +++..++. ..+... ..
T Consensus 1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~~~~~~~~~~~~~------~~~~~~~~---~~~~~~------~~ 65 (351)
T d1f0ka_ 1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKHG------IEIDFIRI---SGLRGK------GI 65 (351)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGGGT------CEEEECCC---CCCTTC------CH
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeCCcchhhcccccC------CcEEEEEC---CCcCCC------CH
Confidence 3899988653399999999999999999999999876532 3455555 77666653 111111 11
Q ss_pred hhHHHHHHHHHhhhhHHHHHHHhhcCCCEEEEcC--CcccHHHHHHHhCCCeEEEecchHHHHHhhccccccccccCCCC
Q 011765 85 YDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDF--AAYWLPARARELGIPSGFFSIFTAATLGYFGPSSVLINDSGDHL 162 (478)
Q Consensus 85 ~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~--~~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (478)
........ ...........++++.+||.++... ....+...|..+++|++.+.....
T Consensus 66 ~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~a~~~~ip~~~~~~~~~-------------------- 124 (351)
T d1f0ka_ 66 KALIAAPL-RIFNAWRQARAIMKAYKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNGI-------------------- 124 (351)
T ss_dssp HHHHTCHH-HHHHHHHHHHHHHHHHCCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSSS--------------------
T ss_pred HHHHHHHH-HHHHhHHHHHHHhhccccceeeecccchhhhhhhhhhhcccceeecccccc--------------------
Confidence 11111111 1122333566788889999998763 444567789999999987633110
Q ss_pred CCCCcccCCCcccccccccccchhhhhhhhhhhcCCcccchhhhhhhccccCCcEEEEcCcCccChHHHHHHHhhcCCCe
Q 011765 163 KTPEDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQLHRKPV 242 (478)
Q Consensus 163 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~~~~~~~~~ 242 (478)
+. .. .++. ....+.+.... . ......
T Consensus 125 -------------~~-----~~----~~~~-------------------~~~~~~~~~~~-~------------~~~~~~ 150 (351)
T d1f0ka_ 125 -------------AG-----LT----NKWL-------------------AKIATKVMQAF-P------------GAFPNA 150 (351)
T ss_dssp -------------CC-----HH----HHHH-------------------TTTCSEEEESS-T------------TSSSSC
T ss_pred -------------cc-----hh----HHHh-------------------hhhcceeeccc-c------------ccccce
Confidence 00 00 0000 00111111111 0 001112
Q ss_pred eeeccCCCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccCCCHHHHHHHHHHHHhCCCCE-EEEEecCCCCCC
Q 011765 243 IPVGQLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELSKLPF-FWVLKKRLGQAD 321 (478)
Q Consensus 243 ~~vGp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~-i~~~~~~~~~~~ 321 (478)
..+|+....... . ...... ......++..+++.+||.+. ......+.+.+....... .+.....
T Consensus 151 ~~~~~~~~~~~~------~-~~~~~~-~~~~~~~~~~i~~~~gs~g~--~~~~~~~~~~~~~l~~~~~~i~~~~~----- 215 (351)
T d1f0ka_ 151 EVVGNPVRTDVL------A-LPLPQQ-RLAGREGPVRVLVVGGSQGA--RILNQTMPQVAAKLGDSVTIWHQSGK----- 215 (351)
T ss_dssp EECCCCCCHHHH------T-SCCHHH-HHTTCCSSEEEEEECTTTCC--HHHHHHHHHHHHHHGGGEEEEEECCT-----
T ss_pred eEEcCCcccccc------c-chhHHh-hhhcccCCcccccccccchh--hhhHHHHHHhhhhhcccceeeeeccc-----
Confidence 333321111000 0 000011 11222334477788888763 222233344444333332 2333221
Q ss_pred CCCCCCC--hhhhhhcCCCcEEEeccCCh-hhhhcCCCceeeeeccChhhHHHHHHhCCcEeccccc---cchhhHHHHH
Q 011765 322 TEPIELP--DGFEERTRGRGVVYTSWAPQ-LAILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCY---ADQGLNAKLL 395 (478)
Q Consensus 322 ~~~~~~p--~~~~~~~~~~n~~~~~~vpq-~~vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~---~DQ~~na~~v 395 (478)
.... ..........++.+..|.++ .++|..+++ +|||||.||++|++++|+|+|++|+. .||..||+++
T Consensus 216 ---~~~~~~~~~~~~~~~~~~~v~~f~~~~~~lm~~adl--~It~~G~~T~~Eal~~g~P~I~iP~~~~~~~Q~~NA~~l 290 (351)
T d1f0ka_ 216 ---GSQQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADV--VVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPL 290 (351)
T ss_dssp ---TCHHHHHHHHHHTTCTTSEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHH
T ss_pred ---cchhhhhhhhcccccccceeeeehhhHHHHHHhCch--hhccccchHHHHHHHhCCceeeeecccCCchHHHHHHHH
Confidence 1111 11111223457778888876 458888888 99999999999999999999999975 4899999999
Q ss_pred hhcCeEEEeeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhcccCChHHHHHHHHHHH
Q 011765 396 EEKQIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYL 462 (478)
Q Consensus 396 ~~~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~ 462 (478)
+++|+|+.++..+ ++.+.|.++|.++.. +...+ +.+-.+.+...+++.+.++.|++..
T Consensus 291 ~~~G~~~~~~~~~----~~~e~l~~~l~~l~~----~~~~~-~~~~~~~~~~~~~a~~i~~~i~~l~ 348 (351)
T d1f0ka_ 291 EKAGAAKIIEQPQ----LSVDAVANTLAGWSR----ETLLT-MAERARAASIPDATERVANEVSRVA 348 (351)
T ss_dssp HHTTSEEECCGGG----CCHHHHHHHHHTCCH----HHHHH-HHHHHHHTCCTTHHHHHHHHHHHHH
T ss_pred HHCCCEEEechhh----CCHHHHHHHHHhhCH----HHHHH-HHHHHHccCCccHHHHHHHHHHHHH
Confidence 9999999998887 899999999988633 22222 2222223455565666666665543
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.32 E-value=3.3e-11 Score=117.70 Aligned_cols=114 Identities=11% Similarity=0.077 Sum_probs=75.3
Q ss_pred CCcEEEeccCChh---hhhcCCCceeeeec----cChhhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeeccCC
Q 011765 337 GRGVVYTSWAPQL---AILAHDSVGGFLTH----AGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEG 409 (478)
Q Consensus 337 ~~n~~~~~~vpq~---~vL~~~~~~~~ItH----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~ 409 (478)
..++.+..++|+. .++..+++ ++.- +..+++.||+++|+|+|+.... .....+. .+.|..++..
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~~adi--~v~~s~~e~~~~~~~Eama~G~Pvi~~~~g----~~~e~i~-~~~G~~~~~~-- 378 (437)
T d2bisa1 308 GNVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAVG----GLRDIIT-NETGILVKAG-- 378 (437)
T ss_dssp TTEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHTTTCEEEEESCT----THHHHCC-TTTCEEECTT--
T ss_pred ccceeccccCcHHHHHHHHhhhcc--ccccccccccchHHHHHHHCCCCEEEeCCC----CcHHhEE-CCcEEEECCC--
Confidence 3456676778874 45667777 5532 3346999999999999986543 3444344 4678777654
Q ss_pred CCcccHHHHHHHHHHHhcc--cchHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHhccc
Q 011765 410 DGFFTRNSVAESLRLVLVE--EKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLKNHRC 467 (478)
Q Consensus 410 ~~~~~~~~l~~~i~~ll~~--~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 467 (478)
+.++|+++|.++|+. +.-..+.+++++.++.+ .-++.++.+++.+++...
T Consensus 379 ----d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~----s~~~~a~~~~~iY~~~i~ 430 (437)
T d2bisa1 379 ----DPGELANAILKALELSRSDLSKFRENCKKRAMSF----SWEKSAERYVKAYTGSID 430 (437)
T ss_dssp ----CHHHHHHHHHHHHTTTTSCTHHHHHHHHHHHHHS----CHHHHHHHHHHHHHTCSC
T ss_pred ----CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhC----CHHHHHHHHHHHHHHHHH
Confidence 789999999999862 22244666666655432 346677878887765543
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Probab=99.10 E-value=3.4e-08 Score=92.99 Aligned_cols=152 Identities=15% Similarity=0.143 Sum_probs=91.5
Q ss_pred HhhhcccCCCCceEEEEeCcccCCCHHHHHHHHHHHHhCCC----CEEEEEecCCCCCCCCCCCCChhhhhhc-CCCcEE
Q 011765 267 IKEWLDEQEKGSVVYVAFGSEAKPSQEELTEIALGLELSKL----PFFWVLKKRLGQADTEPIELPDGFEERT-RGRGVV 341 (478)
Q Consensus 267 ~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~----~~i~~~~~~~~~~~~~~~~~p~~~~~~~-~~~n~~ 341 (478)
.+..+.-.. +..+++..|+... ...+..++++++.+.. ..+..+.+.. ....+- ...++. ..+++.
T Consensus 185 ~r~~~~~~~-~~~~i~~~gr~~~--~Kg~~~li~a~~~l~~~~~~~~~~ii~g~~-----~~~~~~-~~~~~~~~~~~v~ 255 (370)
T d2iw1a1 185 YRQKNGIKE-QQNLLLQVGSDFG--RKGVDRSIEALASLPESLRHNTLLFVVGQD-----KPRKFE-ALAEKLGVRSNVH 255 (370)
T ss_dssp HHHHTTCCT-TCEEEEEECSCTT--TTTHHHHHHHHHTSCHHHHHTEEEEEESSS-----CCHHHH-HHHHHHTCGGGEE
T ss_pred hhhccCCCc-cceEEEEEecccc--ccchhhhcccccccccccccceeeeccccc-----cccccc-ccccccccccccc
Confidence 344443333 4477778888763 3445566666654432 2233333221 111111 111222 234677
Q ss_pred EeccCCh-hhhhcCCCceeee--ec--cChhhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeeccCCCCcccHH
Q 011765 342 YTSWAPQ-LAILAHDSVGGFL--TH--AGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRN 416 (478)
Q Consensus 342 ~~~~vpq-~~vL~~~~~~~~I--tH--gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~~~~~~~~ 416 (478)
+..+..+ .++++.+++ +| ++ |-.+++.||+++|+|+|+.. .......+.+.+.|..+.... +.+
T Consensus 256 ~~g~~~~~~~~~~~adv--~v~ps~~E~~~~~~~EAma~G~PvI~s~----~~g~~e~i~~~~~G~l~~~~~-----d~~ 324 (370)
T d2iw1a1 256 FFSGRNDVSELMAAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTA----VCGYAHYIADANCGTVIAEPF-----SQE 324 (370)
T ss_dssp EESCCSCHHHHHHHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEET----TSTTTHHHHHHTCEEEECSSC-----CHH
T ss_pred ccccccccccccccccc--cccccccccccceeeecccCCeeEEEeC----CCChHHHhcCCCceEEEcCCC-----CHH
Confidence 7666655 468888888 55 33 33479999999999999854 444566677778898775543 899
Q ss_pred HHHHHHHHHhcccchHHHHHHHHHH
Q 011765 417 SVAESLRLVLVEEKGQIYRDKAKEM 441 (478)
Q Consensus 417 ~l~~~i~~ll~~~~~~~~~~~a~~~ 441 (478)
+++++|.++++ |++.++++.+-
T Consensus 325 ~la~~i~~ll~---d~~~~~~~~~~ 346 (370)
T d2iw1a1 325 QLNEVLRKALT---QSPLRMAWAEN 346 (370)
T ss_dssp HHHHHHHHHHH---CHHHHHHHHHH
T ss_pred HHHHHHHHHHc---CHHHHHHHHHH
Confidence 99999999999 66665544433
|
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=98.97 E-value=6.2e-08 Score=95.33 Aligned_cols=172 Identities=8% Similarity=-0.001 Sum_probs=96.0
Q ss_pred CCceEEEEeCcccC-CCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCCCCChhhh--hhcCCCcEEEeccCChhh--
Q 011765 276 KGSVVYVAFGSEAK-PSQEELTEIALGLELSKLPFFWVLKKRLGQADTEPIELPDGFE--ERTRGRGVVYTSWAPQLA-- 350 (478)
Q Consensus 276 ~~~~v~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~--~~~~~~n~~~~~~vpq~~-- 350 (478)
++..+++..|.... -..+.+.+.+..+.+.+.+++++..+.. .....+. ......++.+..+.++..
T Consensus 289 ~~~~~i~~vgrl~~~KG~~~Ll~a~~~~~~~~~~l~~~G~G~~--------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 360 (477)
T d1rzua_ 289 DGSPLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGDV--------ALEGALLAAASRHHGRVGVAIGYNEPLSH 360 (477)
T ss_dssp SSSCEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEEECBCH--------HHHHHHHHHHHHTTTTEEEEESCCHHHHH
T ss_pred CCccEEEEEeeeeecCCcHHHHHHHHHHHhhCCeEEEEecCCc--------hHHHHHHHHHhhcCCeEEEEcccChhHHH
Confidence 34467778888775 2234444444444445777766654321 0001111 111245677666665532
Q ss_pred -hhcCCCceeeeecc---Ch-hhHHHHHHhCCcEecccccc-----chhhHHHHHhhcCeEEEeeccCCCCcccHHHHHH
Q 011765 351 -ILAHDSVGGFLTHA---GW-SSVVEALQFGMPLIVLTCYA-----DQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAE 420 (478)
Q Consensus 351 -vL~~~~~~~~ItHg---G~-~s~~eal~~GvP~l~~P~~~-----DQ~~na~~v~~~g~G~~l~~~~~~~~~~~~~l~~ 420 (478)
+++.+++ ||.-. |. .+++||+++|+|+|+.-..+ ....+...+...+.|...+.. +.++|++
T Consensus 361 ~~~~~aD~--~v~PS~~E~fglv~lEAma~G~PvVas~~GG~~E~v~d~~~~~~~~~~~~G~l~~~~------d~~~la~ 432 (477)
T d1rzua_ 361 LMQAGCDA--IIIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSPV------TLDGLKQ 432 (477)
T ss_dssp HHHHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSC------SHHHHHH
T ss_pred HHHHhCcc--ccCCccccCCCHHHHHHHHcCCCEEEcCCCCCcceeecCCccccccCCCceEEeCCC------CHHHHHH
Confidence 4455666 77554 33 48899999999999844321 112233334444678887764 8999999
Q ss_pred HHHHHhcccchHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHhc
Q 011765 421 SLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLKNH 465 (478)
Q Consensus 421 ~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~ 465 (478)
+|+++++...|++.++++.+-+ +++.=+-++.++..++.+++.
T Consensus 433 ai~~~l~~~~~~~~~~~~~~~a--~~~~fsw~~~a~~~~~lY~~l 475 (477)
T d1rzua_ 433 AIRRTVRYYHDPKLWTQMQKLG--MKSDVSWEKSAGLYAALYSQL 475 (477)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHH--HTCCCBHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhCCHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHH
Confidence 9998876211455444443211 222223366777777766553
|
| >d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Bacillus subtilis [TaxId: 1423]
Probab=98.90 E-value=6e-09 Score=99.18 Aligned_cols=351 Identities=13% Similarity=0.092 Sum_probs=184.7
Q ss_pred CccEEEEecCCCccCHHHHHHHHHHHHhC-CCeEEEEeCCCccccCCCCCC--CCCCCeEEEEecCCCCCCCCCCccccC
Q 011765 5 SKLQIAMFPWLAFGHMIPWLELAKLIAQK-GHKIFFISTPRNIDRLPRLPQ--NLASMIQFVKISLPHVDNLRENAEATI 81 (478)
Q Consensus 5 ~~~~il~~~~~~~gH~~p~l~La~~L~~r-Gh~Vt~~~~~~~~~~~~~~g~--~~~~~i~~~~i~~~~~~~l~~~~~~~~ 81 (478)
+||||++++ +.+..+.-+..|.++|.++ +.++.++.++...+......+ ...+++. + .+..
T Consensus 1 ~k~Ki~~v~-GtR~e~~kl~pli~~l~~~~~~~~~li~tG~H~~~~~~~~~~~~i~~~~~---~------~~~~------ 64 (377)
T d1o6ca_ 1 KKLKVMTVF-GTRPEAIKMAPLVLELKKYPEIDSYVTVTAQHRQMLDQVLDAFHIKPDFD---L------NIMK------ 64 (377)
T ss_dssp CCEEEEEEE-CSHHHHHHHHHHHHHGGGCTTEEEEEEECCSCGGGTHHHHHHTTCCCSEE---C------CCCC------
T ss_pred CCceEEEEE-EchHhHHHHHHHHHHHHhCCCCCEEEEEeCCCHHHHHHHHhhcCCCCcee---e------ecCC------
Confidence 589988887 8889999999999999987 679998888876542221110 0001100 0 0000
Q ss_pred CCChhHHHHHHHHHhhhhHHHHHHHhhcCCCEEE--EcCCcc-cHHHHHHHhCCCeEEEecchHHHHHhhcccccccccc
Q 011765 82 DLPYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLL--FDFAAY-WLPARARELGIPSGFFSIFTAATLGYFGPSSVLINDS 158 (478)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI--~D~~~~-~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~~~~ 158 (478)
+ ..+ +..........+.+.+.+.+||+|| .|.+.. .++.+|..++||++-+..+--+
T Consensus 65 ~-~~~----~~~~~~~~i~~~~~~~~~~kpD~v~v~GDr~e~la~a~aa~~~~Ipi~HiegG~~s--------------- 124 (377)
T d1o6ca_ 65 E-RQT----LAEITSNALVRLDELFKDIKPDIVLVHGDTTTTFAGSLAAFYHQIAVGHVEAGLRT--------------- 124 (377)
T ss_dssp T-TCC----HHHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHHTTCEEEEESCCCCC---------------
T ss_pred C-CCC----HHHHHHHHHHhhhhhhhhcccceeEeeecccccchhhhhhhhccceEEEEeccccc---------------
Confidence 0 011 2223344455677888889999986 454544 4678999999999977331100
Q ss_pred CCCCCCCCcccCCCcccccccccccchhhhhhhhhhhcCCcccchhhhhhhccccCCcEEEEcCcCccChHHHHHHHhh-
Q 011765 159 GDHLKTPEDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQL- 237 (478)
Q Consensus 159 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~~~~- 237 (478)
-..+.+.+.+ ..+.. .-+-++..++.+ ....+.+...
T Consensus 125 ------------~~~~~~~~de------~~R~~-------------------iskls~~hf~~t-----~~~~~~L~~~G 162 (377)
T d1o6ca_ 125 ------------GNKYSPFPEE------LNRQM-------------------TGAIADLHFAPT-----GQAKDNLLKEN 162 (377)
T ss_dssp ------------SCTTTTTTHH------HHHHH-------------------HHHHCSEEEESS-----HHHHHHHHHTT
T ss_pred ------------ccccccCchh------hhccc-------------------cccceeEEeecc-----hhhhhhhhhhc
Confidence 0000011000 00000 011234445544 2222222221
Q ss_pred c-CCCeeeec-cCCCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccCCC---HHHHHHHHHHHHhCCCCEEEE
Q 011765 238 H-RKPVIPVG-QLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPS---QEELTEIALGLELSKLPFFWV 312 (478)
Q Consensus 238 ~-~~~~~~vG-p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~---~~~~~~~~~al~~~~~~~i~~ 312 (478)
. +.++..|| |....-..... .....+. +....+++.+++++-...... ...+..+...+..... +.|.
T Consensus 163 ~~~~~I~~vG~~~~D~i~~~~~---~~~~~~~---~~~~~~~~~ilvt~Hr~~~~~~~~~~~~~~~~~~~~~~~~-~~~i 235 (377)
T d1o6ca_ 163 KKADSIFVTGNTAIDALNTTVR---DGYSHPV---LDQVGEDKMILLTAHRRENLGEPMENMFKAIRRIVGEFED-VQVV 235 (377)
T ss_dssp CCGGGEEECCCHHHHHHHHHCC---SSCCCST---TTTTTTSEEEEECC----------HHHHHHHHHHHHHCTT-EEEE
T ss_pred cccceEeeccchhHHHHHHHHH---HHHhhhh---hhhccCCceEEEEeccccccccchHHHHHHHHhhcccccc-cccc
Confidence 1 22466677 32211000000 0001111 112223457887776544422 2333445555544432 2333
Q ss_pred EecCCCCCCCCCCCCChhhhh-hcCCCcEEEeccCChhh---hhcCCCceeeeeccChhhHHHHHHhCCcEeccccccch
Q 011765 313 LKKRLGQADTEPIELPDGFEE-RTRGRGVVYTSWAPQLA---ILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQ 388 (478)
Q Consensus 313 ~~~~~~~~~~~~~~~p~~~~~-~~~~~n~~~~~~vpq~~---vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ 388 (478)
...... ...-....+ ....+|+.+.+.++..+ +|.++++ +|+..|.+ +.||-..|+|+|.+-...|+
T Consensus 236 ~~~~~~------~~~~~~~~~~~~~~~ni~~~~~l~~~~fl~llk~s~~--vIgnSss~-i~Ea~~lg~P~Inir~~tER 306 (377)
T d1o6ca_ 236 YPVHLN------PVVREAAHKHFGDSDRVHLIEPLEVIDFHNFAAKSHF--ILTDSGGV-QEEAPSLGKPVLVLRDTTER 306 (377)
T ss_dssp EC----------CHHHHHHHHC--CCSSEEECCCCCHHHHHHHHHHCSE--EEEC--CH-HHHGGGGTCCEEEECSCCC-
T ss_pred cccccc------cccchhhhhccccccceEeccccchHHHHHHHhhhhe--eecccchh-HHhhhhhhceEEEeCCCCcC
Confidence 221100 000011111 11356899989888755 6788888 99999988 77999999999998765555
Q ss_pred hhHHHHHhhcCeEEEeeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhcccCChHHHHHHHHHHHH
Q 011765 389 GLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLK 463 (478)
Q Consensus 389 ~~na~~v~~~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~~ 463 (478)
+.- .+.|.-+.. . .+.+++.+++.+++. ++.+.+++.....-..++..+.+.++.++.++.
T Consensus 307 qe~----~~~g~nilv--~-----~~~~~I~~~i~~~l~---~~~~~~~~~~~~npYGdG~as~rI~~~L~~~~~ 367 (377)
T d1o6ca_ 307 PEG----VEAGTLKLA--G-----TDEENIYQLAKQLLT---DPDEYKKMSQASNPYGDGEASRRIVEELLFHYG 367 (377)
T ss_dssp --C----TTTTSSEEE--C-----SCHHHHHHHHHHHHH---CHHHHHHHHHCCCTTCCSCHHHHHHHHHHHHTT
T ss_pred cch----hhcCeeEEC--C-----CCHHHHHHHHHHHHh---ChHHHhhhccCCCCCCCChHHHHHHHHHHHhhC
Confidence 431 134544332 2 478999999999999 778888777766666777766777776666554
|
| >d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Thermus thermophilus [TaxId: 274]
Probab=98.76 E-value=5.6e-08 Score=92.14 Aligned_cols=347 Identities=14% Similarity=0.078 Sum_probs=186.0
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhC-CCeEEEEeCCCccccCCCCCCCCCCCeEE-EEecCCCCCCCCCCccccCCCC
Q 011765 7 LQIAMFPWLAFGHMIPWLELAKLIAQK-GHKIFFISTPRNIDRLPRLPQNLASMIQF-VKISLPHVDNLRENAEATIDLP 84 (478)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~La~~L~~r-Gh~Vt~~~~~~~~~~~~~~g~~~~~~i~~-~~i~~~~~~~l~~~~~~~~~~~ 84 (478)
.||+ +-.+++..+.-+..|.++|.+. +.++.++.+....+...+... . .+++. ..+ .+.. + .
T Consensus 3 kkI~-~v~GtR~e~~kl~pli~~l~~~~~~~~~li~tG~H~~~~~~~~~-~-~~i~~d~~l------~~~~------~-~ 66 (373)
T d1v4va_ 3 KRVV-LAFGTRPEATKMAPVYLALRGIPGLKPLVLLTGQHREQLRQALS-L-FGIQEDRNL------DVMQ------E-R 66 (373)
T ss_dssp EEEE-EEECSHHHHHHHHHHHHHHHTSTTEEEEEEECSSCHHHHHHHHH-T-TTCCCSEEC------CCCS------S-C
T ss_pred CeEE-EEEEhhHHHHHHHHHHHHHHhCCCCCEEEEEccCChhhhhCcch-h-cCCCccccC------CCCC------C-C
Confidence 4554 4456778888888899999875 899998888876543211000 0 00110 001 0000 0 0
Q ss_pred hhHHHHHHHHHhhhhHHHHHHHhhcCCCEEE--EcCCcc-cHHHHHHHhCCCeEEEecchHHHHHhhccccccccccCCC
Q 011765 85 YDEVKYLKQSFDCLEEPMAKLLQSLAPDWLL--FDFAAY-WLPARARELGIPSGFFSIFTAATLGYFGPSSVLINDSGDH 161 (478)
Q Consensus 85 ~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI--~D~~~~-~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (478)
.+ +......+...+.+++.+.+||+|+ .|.+.. ++..+|..++||++-+..+.-+
T Consensus 67 ~s----~~~~~~~~~~~~~~~l~~~kPD~vlv~GDr~e~la~a~aa~~~~ipi~HiegG~rs------------------ 124 (373)
T d1v4va_ 67 QA----LPDLAARILPQAARALKEMGADYVLVHGDTLTTFAVAWAAFLEGIPVGHVEAGLRS------------------ 124 (373)
T ss_dssp CC----HHHHHHHHHHHHHHHHHHTTCSEEEEESSCHHHHHHHHHHHHTTCCEEEETCCCCC------------------
T ss_pred CC----HHHHHHHHHHHHhhhhhhcCcccccccccCccchhHHHHHHHhhhhheeecccccc------------------
Confidence 11 1122334455777889999999997 465554 4567889999999977321100
Q ss_pred CCCCCcccCCCcc-cccccccccchhhhhhhhhhhcCCcccchhhhhhhccccCCcEEEEcCcCccChHHHHHHHhh-c-
Q 011765 162 LKTPEDYTRVPNW-VSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQL-H- 238 (478)
Q Consensus 162 ~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~~~~-~- 238 (478)
..+ .+. ..-..+... -+-++..++.+ ....+.+... .
T Consensus 125 ----------g~~~~~~------~de~~R~~i-------------------skls~~hf~~t-----~~~~~~L~~~Ge~ 164 (373)
T d1v4va_ 125 ----------GNLKEPF------PEEANRRLT-------------------DVLTDLDFAPT-----PLAKANLLKEGKR 164 (373)
T ss_dssp ----------SCTTSST------THHHHHHHH-------------------HHHCSEEEESS-----HHHHHHHHTTTCC
T ss_pred ----------cccccCc------chhhhhhhh-------------------ccccceeeecc-----hhhhhhhhhhccc
Confidence 000 000 000000010 11123333333 1111111111 1
Q ss_pred CCCeeeec-cCCCCCCCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccCCC-HHHHHHHHHHHHhCCCCEEEEEecC
Q 011765 239 RKPVIPVG-QLPTTTGDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPS-QEELTEIALGLELSKLPFFWVLKKR 316 (478)
Q Consensus 239 ~~~~~~vG-p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~-~~~~~~~~~al~~~~~~~i~~~~~~ 316 (478)
+.++..|| |...... ....+........+++.+++++-...+.+ .+.+..++..+......+.+++...
T Consensus 165 ~~~I~~vG~p~~D~i~---------~~~~~~~~~~~~~~~~~~lvt~hr~~n~~~~~~~~~~~~~~~~~~~~~~~i~p~~ 235 (373)
T d1v4va_ 165 EEGILVTGQTGVDAVL---------LAAKLGRLPEGLPEGPYVTVTMHRRENWPLLSDLAQALKRVAEAFPHLTFVYPVH 235 (373)
T ss_dssp GGGEEECCCHHHHHHH---------HHHHHCCCCTTCCSSCEEEECCCCGGGGGGHHHHHHHHHHHHHHCTTSEEEEECC
T ss_pred ccceeecccchhhHHH---------hhhhhcccccccccccceeEEeccccccchHHHHHHHHHHHhhhcccceeeeeec
Confidence 12455556 2221000 00011111122234568888887655433 3445556666655544444443321
Q ss_pred CCCCCCCCCCCChhh-hhhcCCCcEEEeccCChhh---hhcCCCceeeeeccChhhHHHHHHhCCcEeccccccchhhHH
Q 011765 317 LGQADTEPIELPDGF-EERTRGRGVVYTSWAPQLA---ILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTCYADQGLNA 392 (478)
Q Consensus 317 ~~~~~~~~~~~p~~~-~~~~~~~n~~~~~~vpq~~---vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na 392 (478)
.. ...-... ......+|+.+.+.+++.+ +|.++.+ +|+..|.+ +.||-+.|+|+|.+....+.+.-
T Consensus 236 ~~------~~~~~~~~~~~~~~~n~~~~~~l~~~~~l~ll~~s~~--vignSssg-i~Ea~~lg~P~Inir~~~eRqeg- 305 (373)
T d1v4va_ 236 LN------PVVREAVFPVLKGVRNFVLLDPLEYGSMAALMRASLL--LVTDSGGL-QEEGAALGVPVVVLRNVTERPEG- 305 (373)
T ss_dssp SC------HHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTEEE--EEESCHHH-HHHHHHTTCCEEECSSSCSCHHH-
T ss_pred cc------ccchhhhhhhhcccccceeeccchHHHHHHHhhhcee--Eecccchh-hhcchhhcCcEEEeCCCccCHHH-
Confidence 10 0000001 1112346888888887755 4666776 99997654 77999999999999764443332
Q ss_pred HHHhhcCeEEEeeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhcccCChHHHHHHHHHHHH
Q 011765 393 KLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLK 463 (478)
Q Consensus 393 ~~v~~~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~~ 463 (478)
+ +.|.-+. .. .+.+++.+++..+++ ++.+++++.....-..++..+.+.++.+.+++.
T Consensus 306 ~---~~g~nvl--v~-----~d~~~I~~~i~~~l~---~~~~~~~~~~~~npYGdG~as~rI~~~L~~~~~ 363 (373)
T d1v4va_ 306 L---KAGILKL--AG-----TDPEGVYRVVKGLLE---NPEELSRMRKAKNPYGDGKAGLMVARGVAWRLG 363 (373)
T ss_dssp H---HHTSEEE--CC-----SCHHHHHHHHHHHHT---CHHHHHHHHHSCCSSCCSCHHHHHHHHHHHHTT
T ss_pred H---hcCeeEE--cC-----CCHHHHHHHHHHHHc---CHHHHhhcccCCCCCCCCHHHHHHHHHHHHHhC
Confidence 2 3454443 32 588999999999999 888888888776667777766777776666554
|
| >d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Escherichia coli [TaxId: 562]
Probab=98.69 E-value=3.2e-07 Score=86.72 Aligned_cols=349 Identities=13% Similarity=0.081 Sum_probs=186.2
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhC-CCeEEEEeCCCccccCCCCCC--CCCCCeEEEEecCCCCCCCCCCccccCCC
Q 011765 7 LQIAMFPWLAFGHMIPWLELAKLIAQK-GHKIFFISTPRNIDRLPRLPQ--NLASMIQFVKISLPHVDNLRENAEATIDL 83 (478)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~La~~L~~r-Gh~Vt~~~~~~~~~~~~~~g~--~~~~~i~~~~i~~~~~~~l~~~~~~~~~~ 83 (478)
|||++++ +++..+.-+..|.++|.++ +.++.++.+....+....... ...+++ .+ .+...
T Consensus 1 MKi~~v~-GtR~e~~kl~pli~~l~~~~~~~~~li~tG~H~~~~~~~~~~~~~~~~~---~~------~~~~~------- 63 (376)
T d1f6da_ 1 MKVLTVF-GTRPEAIKMAPLVHALAKDPFFEAKVCVTAQHREMLDQVLKLFSIVPDY---DL------NIMQP------- 63 (376)
T ss_dssp CEEEEEE-CSHHHHHHHHHHHHHHHHCTTCEEEEEECCTTGGGGHHHHHHTTCCCSE---EC------CCCSS-------
T ss_pred CeEEEEE-EhhHhHHHHHHHHHHHHhCCCCCEEEEEcCCCHHHHHHHHHhcCCCCCc---cc------ccCCC-------
Confidence 8988888 8899999999999999886 689999998877543221100 000000 01 00000
Q ss_pred ChhHHHHHHHHHhhhhHHHHHHHhhcCCCEEE--EcCCcc-cHHHHHHHhCCCeEEEecchHHHHHhhccccccccccCC
Q 011765 84 PYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLL--FDFAAY-WLPARARELGIPSGFFSIFTAATLGYFGPSSVLINDSGD 160 (478)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI--~D~~~~-~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (478)
..+ +..........+.+.+.+.+||+|+ .|.+.. +++.+|..++||++-+..+--+
T Consensus 64 ~~~----~~~~~~~~i~~~~~~~~~~kPD~v~v~GDr~e~la~a~aa~~~~ipi~HiegG~~s----------------- 122 (376)
T d1f6da_ 64 GQG----LTEITCRILEGLKPILAEFKPDVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGLRT----------------- 122 (376)
T ss_dssp SSC----HHHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHTTTCCEEEESCCCCC-----------------
T ss_pred CCC----HHHHHHHHHHhhHHHHHhccCcceeeeccccchhhHHHHHHhhCceEEEEeccccc-----------------
Confidence 001 1222333445677788889999986 455544 4567899999999987331100
Q ss_pred CCCCCCcccCCCcccccccccccchhhhhhhhhhhcCCcccchhhhhhhccccCCcEEEEcCcCccChHHHHHHHhh-c-
Q 011765 161 HLKTPEDYTRVPNWVSFPTTISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRSCMEFEPEWLKLLEQL-H- 238 (478)
Q Consensus 161 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~~~~-~- 238 (478)
-...-+.+. -..+.. .-+-++..++.+ ......+... .
T Consensus 123 ----------~~~~~~~pd------e~~R~~-------------------iskls~~hf~~~-----~~~~~~L~~~G~~ 162 (376)
T d1f6da_ 123 ----------GDLYSPWPE------EANRTL-------------------TGHLAMYHFSPT-----ETSRQNLLRENVA 162 (376)
T ss_dssp ----------SCTTSSTTH------HHHHHH-------------------HHHTCSEEEESS-----HHHHHHHHHTTCC
T ss_pred ----------ccccccCch------hhhhhh-------------------hccceeEEEecc-----HHHHhHHHhcCCC
Confidence 000001100 000000 112345555544 2222222111 1
Q ss_pred CCCeeeeccCCCCC-------CCCCCCCCCCChhhHhhhcccCCCCceEEEEeCcccCCCHHHHHHH---HHHHHhCCCC
Q 011765 239 RKPVIPVGQLPTTT-------GDGDSDAETDTWRSIKEWLDEQEKGSVVYVAFGSEAKPSQEELTEI---ALGLELSKLP 308 (478)
Q Consensus 239 ~~~~~~vGp~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~---~~al~~~~~~ 308 (478)
+.++..||-...+. .... .......+........+++.++|++=...... +.+..+ +..+.+....
T Consensus 163 ~~~I~~vG~~~~D~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ilvt~H~~~~~~-~~~~~i~~~l~~~~~~~~~ 238 (376)
T d1f6da_ 163 DSRIFITGNTVIDALLWVRDQVMSS---DKLRSELAANYPFIDPDKKMILVTGHRRESFG-RGFEEICHALADIATTHQD 238 (376)
T ss_dssp GGGEEECCCHHHHHHHHHHHHTTTC---HHHHHHHHTTCTTCCTTSEEEEECCCCBSSCC-HHHHHHHHHHHHHHHHCTT
T ss_pred ccccceecCchHHHHHHHHhhhhcc---chhhhhhhccccccCCCCceEEEecccchhhh-hhHHHHHHHHhhhhhhcce
Confidence 23467777322110 0000 00001111111112234568888876555433 333343 4444444555
Q ss_pred EEEEEecCCCCCCCCCCCCChhhhhh-cCCCcEEEeccCChhh---hhcCCCceeeeeccChhhHHHHHHhCCcEecccc
Q 011765 309 FFWVLKKRLGQADTEPIELPDGFEER-TRGRGVVYTSWAPQLA---ILAHDSVGGFLTHAGWSSVVEALQFGMPLIVLTC 384 (478)
Q Consensus 309 ~i~~~~~~~~~~~~~~~~~p~~~~~~-~~~~n~~~~~~vpq~~---vL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~ 384 (478)
+.+.+..... ...-....+. ...+|+.+.+-+++.+ +|.++.+ +|+..|.+ +.||-+.|+|+|.+-.
T Consensus 239 ~~ii~p~~~~------~~~~~~~~~~~~~~~ni~~~~~l~~~~fl~ll~~a~~--vignSssg-i~Ea~~lg~P~Inir~ 309 (376)
T d1f6da_ 239 IQIVYPVHLN------PNVREPVNRILGHVKNVILIDPQEYLPFVWLMNHAWL--ILTDSGGI-QEEAPSLGKPVLVMRD 309 (376)
T ss_dssp EEEEEECCBC------HHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHCSE--EEESSSGG-GGTGGGGTCCEEECSS
T ss_pred eEEecccccc------hhhhhhHhhhhcccccceeeccccHHHHHHHHhhceE--EEecCcch-HhhHHHhCCCEEEcCC
Confidence 5554432210 0000011111 1346888877777654 6788888 99998654 6799999999998866
Q ss_pred ccchhhHHHHHhhcCeEEEeeccCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHh
Q 011765 385 YADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLKN 464 (478)
Q Consensus 385 ~~DQ~~na~~v~~~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~ 464 (478)
..+|+. ++ +.|.- +... .+.+++.+++.++++ ++.+++.+.+...-..++.. .+.|++.|++
T Consensus 310 ~ter~~---~~-~~g~~--i~v~-----~~~~~I~~ai~~~l~---~~~~~~~~~~~~npYGdG~a----s~rI~~iLk~ 371 (376)
T d1f6da_ 310 TTERPE---AV-TAGTV--RLVG-----TDKQRIVEEVTRLLK---DENEYQAMSRAHNPYGDGQA----CSRILEALKN 371 (376)
T ss_dssp CCSCHH---HH-HHTSE--EECC-----SSHHHHHHHHHHHHH---CHHHHHHHHHSCCTTCCSCH----HHHHHHHHHH
T ss_pred CccCcc---ce-ecCee--EECC-----CCHHHHHHHHHHHHh---ChHhhhhhccCCCCCCCChH----HHHHHHHHHh
Confidence 666664 33 23433 3333 488999999999999 77777777666665666664 4445554443
|
| >d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: First mannosyl transferase WbaZ species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.95 E-value=3.3e-05 Score=63.50 Aligned_cols=140 Identities=6% Similarity=0.024 Sum_probs=84.4
Q ss_pred EEEeCcccCCCHHHHHHHHHHHHhCC-CCEEEEEecCCCCCCCCCCCCChhhh---hhcCCCcEEEeccCChhh---hhc
Q 011765 281 YVAFGSEAKPSQEELTEIALGLELSK-LPFFWVLKKRLGQADTEPIELPDGFE---ERTRGRGVVYTSWAPQLA---ILA 353 (478)
Q Consensus 281 ~vs~Gs~~~~~~~~~~~~~~al~~~~-~~~i~~~~~~~~~~~~~~~~~p~~~~---~~~~~~n~~~~~~vpq~~---vL~ 353 (478)
++..|.+. +...+..++++++++. .++++ ++... ..+.-..+. .+...+|+++..|+|..+ ++.
T Consensus 15 ~l~iGrl~--~~K~~~~~i~a~~~l~~~~l~i-vg~~~------~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~ 85 (166)
T d2f9fa1 15 WLSVNRIY--PEKRIELQLEVFKKLQDEKLYI-VGWFS------KGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYS 85 (166)
T ss_dssp EEEECCSS--GGGTHHHHHHHHHHCTTSCEEE-EBCCC------TTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHH
T ss_pred EEEEecCc--cccCHHHHHHHHHHhcCCeEEE-EEecc------cccchhhhhhhhcccccCcEEEeecccccccccccc
Confidence 45667765 3445556666666554 44444 44221 111111222 222356899999999844 666
Q ss_pred CCCceeeeecc-C-hhhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeeccCCCCcccHHHHHHHHHHHhcccch
Q 011765 354 HDSVGGFLTHA-G-WSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDGFFTRNSVAESLRLVLVEEKG 431 (478)
Q Consensus 354 ~~~~~~~ItHg-G-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~ 431 (478)
.+++-++-+.. | .+++.||+++|+|+|+.+..+ ....+.....|...+ .+.+++.++|.+++++ .
T Consensus 86 ~ad~~i~ps~~e~~~~~~~Ea~~~g~pvi~s~~~~----~~e~i~~~~~g~~~~-------~d~~~~~~~i~~l~~~--~ 152 (166)
T d2f9fa1 86 RCKGLLCTAKDEDFGLTPIEAMASGKPVIAVNEGG----FKETVINEKTGYLVN-------ADVNEIIDAMKKVSKN--P 152 (166)
T ss_dssp HCSEEEECCSSCCSCHHHHHHHHTTCCEEEESSHH----HHHHCCBTTTEEEEC-------SCHHHHHHHHHHHHHC--T
T ss_pred cccccccccccccccccccccccccccceeecCCc----ceeeecCCcccccCC-------CCHHHHHHHHHHHHhC--H
Confidence 78873333322 2 359999999999999976543 333455556676543 3789999999999993 1
Q ss_pred HHHHHHHHHHH
Q 011765 432 QIYRDKAKEMK 442 (478)
Q Consensus 432 ~~~~~~a~~~~ 442 (478)
+.+++++.+-+
T Consensus 153 ~~~~~~~~~~a 163 (166)
T d2f9fa1 153 DKFKKDCFRRA 163 (166)
T ss_dssp TTTHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 34666655433
|
| >d1pswa_ c.87.1.7 (A:) ADP-heptose LPS heptosyltransferase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: ADP-heptose LPS heptosyltransferase II domain: ADP-heptose LPS heptosyltransferase II species: Escherichia coli [TaxId: 562]
Probab=97.35 E-value=0.0063 Score=55.60 Aligned_cols=105 Identities=12% Similarity=0.057 Sum_probs=72.0
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCCccccCCCCCCCCCCCeE-EEEecCCCCCCCCCCccccCCC
Q 011765 7 LQIAMFPWLAFGHMIPWLELAKLIAQK--GHKIFFISTPRNIDRLPRLPQNLASMIQ-FVKISLPHVDNLRENAEATIDL 83 (478)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~~~~~g~~~~~~i~-~~~i~~~~~~~l~~~~~~~~~~ 83 (478)
||||++-..+-|++.-+..+.++|+++ +.+|++++.+.+.+.++.. +.+. +..++. . ..
T Consensus 1 MkILii~~~~iGD~il~~p~i~~Lk~~~P~~~I~~l~~~~~~~l~~~~-----p~id~v~~~~~----~--~~------- 62 (348)
T d1pswa_ 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSRM-----PEVNEAIPMPL----G--HG------- 62 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTTC-----TTEEEEEEC------------------
T ss_pred CeEEEEcCCChHHHHHHHHHHHHHHHHCCCCEEEEEEChhHHHHHhhC-----CCcCEEEEecC----c--cc-------
Confidence 899999999999999999999999997 8999999998888766543 3343 332320 0 00
Q ss_pred ChhHHHHHHHHHhhhhHHHHHHHhhcCCCEEEEcCCcccHHHHHHHhCCCeEEEe
Q 011765 84 PYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAAYWLPARARELGIPSGFFS 138 (478)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~~~~~~~A~~lgIP~i~~~ 138 (478)
... .... ..+...++..++|++|.-........++...+++....+
T Consensus 63 ~~~--------~~~~-~~l~~~l~~~~~D~~i~~~~~~~~~~~~~~~~~~~~~~~ 108 (348)
T d1pswa_ 63 ALE--------IGER-RKLGHSLREKRYDRAYVLPNSFKSALVPLFAGIPHRTGW 108 (348)
T ss_dssp --C--------HHHH-HHHHHHTTTTTCSEEEECSCCSGGGHHHHHTTCSEEEEE
T ss_pred cch--------hhhh-hhHHHHhhhcccceEeecccccchhhHHHhhcccccccc
Confidence 000 0011 134444666799999976555556677888899987654
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=96.88 E-value=0.0033 Score=52.49 Aligned_cols=76 Identities=13% Similarity=0.048 Sum_probs=53.6
Q ss_pred cEEEeccCChh---hhhcCCCceeeee----ccChhhHHHHHHhCCcEeccccccchhhHHHHHhhcCeEEEeeccCCCC
Q 011765 339 GVVYTSWAPQL---AILAHDSVGGFLT----HAGWSSVVEALQFGMPLIVLTCYADQGLNAKLLEEKQIVELIPRDEGDG 411 (478)
Q Consensus 339 n~~~~~~vpq~---~vL~~~~~~~~It----HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~g~G~~l~~~~~~~ 411 (478)
...+..+++.. .++..+++ +|. .|-.+++.||+++|+|+|+--. ..... +...+.|..++..
T Consensus 93 ~~~~~~~~~~~~l~~~~~~~di--~v~ps~~e~~~~~~~Eam~~G~pvI~~~~----~~~~e-~i~~~~g~~~~~~---- 161 (196)
T d2bfwa1 93 VKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRD-IITNETGILVKAG---- 161 (196)
T ss_dssp EEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESC----HHHHH-HCCTTTCEEECTT----
T ss_pred eEEeeeccccccchhccccccc--cccccccccccccchhhhhcCceeeecCC----Cccce-eecCCceeeECCC----
Confidence 45566778764 46677887 663 3335899999999999998533 22222 3344678777753
Q ss_pred cccHHHHHHHHHHHhc
Q 011765 412 FFTRNSVAESLRLVLV 427 (478)
Q Consensus 412 ~~~~~~l~~~i~~ll~ 427 (478)
+.+++.++|.++++
T Consensus 162 --~~~~l~~~i~~~l~ 175 (196)
T d2bfwa1 162 --DPGELANAILKALE 175 (196)
T ss_dssp --CHHHHHHHHHHHHH
T ss_pred --CHHHHHHHHHHHHh
Confidence 78999999999886
|
| >d1xmpa_ c.23.8.1 (A:) N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) {Bacillus anthracis [TaxId: 1392]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) family: N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) domain: N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) species: Bacillus anthracis [TaxId: 1392]
Probab=92.94 E-value=0.32 Score=37.69 Aligned_cols=141 Identities=15% Similarity=0.060 Sum_probs=80.9
Q ss_pred CceEEEEeCcccCCCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCCCCChhhhhhcCCCcEEEeccCChhhhhcCCC
Q 011765 277 GSVVYVAFGSEAKPSQEELTEIALGLELSKLPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDS 356 (478)
Q Consensus 277 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~n~~~~~~vpq~~vL~~~~ 356 (478)
||.|-|=+||.+ +....+++.+.|+.++..+-..+.. .-..|+.+. +|+....- .+
T Consensus 1 K~~V~IimGS~S--D~~~~~~a~~~L~~~gi~~~~~v~S--------AHrtp~rl~-----------~~~~~~~~---~~ 56 (155)
T d1xmpa_ 1 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVS--------AHRTPDYMF-----------EYAETARE---RG 56 (155)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECC--------TTTSHHHHH-----------HHHHHTTT---TT
T ss_pred CCEEEEEECcHh--hHHHHHHHHHHHHHcCCcEEEEEec--------hhcChHHHH-----------HHHHHHHh---hc
Confidence 467888899877 7888999999999999987655532 233444322 23333221 22
Q ss_pred ceeeeeccCh-h---hHHHHHHhCCcEecccccc---chhhHHHHHhhc--CeEEEeeccCCCCcccHHHHHHHHHHHhc
Q 011765 357 VGGFLTHAGW-S---SVVEALQFGMPLIVLTCYA---DQGLNAKLLEEK--QIVELIPRDEGDGFFTRNSVAESLRLVLV 427 (478)
Q Consensus 357 ~~~~ItHgG~-~---s~~eal~~GvP~l~~P~~~---DQ~~na~~v~~~--g~G~~l~~~~~~~~~~~~~l~~~i~~ll~ 427 (478)
++++|.=+|+ + ++..++ .-.|+|++|... +-.+.-.-+.++ |+.+..-.-..++-.++.-++. ++|.
T Consensus 57 ~~viIa~AG~aa~Lpgvva~~-t~~PVIgVP~~~~~~~G~d~llS~vqMP~Gipv~tv~v~~~~~~nAa~~A~---~Il~ 132 (155)
T d1xmpa_ 57 LKVIIAGAGGAAHLPGMVAAK-TNLPVIGVPVQSKALNGLDSLLSIVQMPGGVPVATVAIGKAGSTNAGLLAA---QILG 132 (155)
T ss_dssp CCEEEEEEESSCCHHHHHHTT-CCSCEEEEEECCTTTTTHHHHHHHHCCCTTCCCEECCSSHHHHHHHHHHHH---HHHH
T ss_pred ceEEEeecccCCCchhHHHHh-ccceEEEEEeecccCcCcccHHHHHhCccCCCceEEEecCcchHHHHHHHH---HHHc
Confidence 3337776664 3 333332 446999999863 445555555566 5544332211000023333433 3443
Q ss_pred ccchHHHHHHHHHHHHHhc
Q 011765 428 EEKGQIYRDKAKEMKGLFG 446 (478)
Q Consensus 428 ~~~~~~~~~~a~~~~~~~~ 446 (478)
.. |++++++.+..++.+.
T Consensus 133 ~~-d~~l~~~l~~~r~~~~ 150 (155)
T d1xmpa_ 133 SF-HDDIHDALELRREAIE 150 (155)
T ss_dssp TT-CHHHHHHHHHHHHHHH
T ss_pred cC-CHHHHHHHHHHHHHHH
Confidence 11 6889999998887764
|
| >d1j9ja_ c.106.1.1 (A:) SurE homolog TM1662 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: SurE-like superfamily: SurE-like family: SurE-like domain: SurE homolog TM1662 species: Thermotoga maritima [TaxId: 2336]
Probab=92.30 E-value=0.5 Score=40.14 Aligned_cols=113 Identities=15% Similarity=0.158 Sum_probs=60.2
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCCCCCeEEEEecCCCCCCCCCCc--cccCCCC
Q 011765 7 LQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVDNLRENA--EATIDLP 84 (478)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~g~~~~~~i~~~~i~~~~~~~l~~~~--~~~~~~~ 84 (478)
||||+.-==+. |---+..|+++|. +||+|+++.+...+.-....- .....+++..+.. ..+. ......+
T Consensus 1 M~ILltNDDGi-~s~gl~~L~~~l~-~~~~V~vvAP~~~~S~~g~ai-t~~~~l~~~~~~~------~~~~~~~~v~GTP 71 (247)
T d1j9ja_ 1 MRILVTNDDGI-QSKGIIVLAELLS-EEHEVFVVAPDKERSATGHSI-TIHVPLWMKKVFI------SERVVAYSTTGTP 71 (247)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHT-TTSEEEEEEESSCCTTCTTCC-CCSSCCCEEECCC------SSSEEEEEESSCH
T ss_pred CeEEEEcCCCC-CChHHHHHHHHHh-cCCeEEEEecCCCCcCCcccc-cCCCCcceEEeec------CCCceEEEeCCch
Confidence 78877654444 2222567788874 689999999988765443221 1112344444321 0111 1111112
Q ss_pred hhHHHHHHHHHhhhhHHHHHHHhhcCCCEEEEcC----------Ccc---cHHHHHHHhCCCeEEEec
Q 011765 85 YDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDF----------AAY---WLPARARELGIPSGFFSI 139 (478)
Q Consensus 85 ~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~----------~~~---~~~~~A~~lgIP~i~~~~ 139 (478)
. +...-.+..+ -..+||+||+.. +.+ .|++-|..+|||.|.++-
T Consensus 72 a----------Dcv~~al~~l-~~~~pDlVvSGIN~G~N~g~dv~ySGTVgAA~ea~~~gipsiA~S~ 128 (247)
T d1j9ja_ 72 A----------DCVKLAYNVV-MDKRVDLIVSGVNRGPNMGMDILHSGTVSGAMEGAMMNIPSIAISS 128 (247)
T ss_dssp H----------HHHHHHHHTT-STTCCSEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred H----------HHHHHhhhhc-ccCcccEEEecccCCCccchhhhhHHHHHHHHHHHhcCCCcceehh
Confidence 1 1111123223 345899999753 222 345667889999999864
|
| >d1u11a_ c.23.8.1 (A:) N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) {Acetobacter aceti [TaxId: 435]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) family: N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) domain: N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) species: Acetobacter aceti [TaxId: 435]
Probab=91.94 E-value=0.3 Score=38.02 Aligned_cols=142 Identities=14% Similarity=0.098 Sum_probs=81.0
Q ss_pred CceEEEEeCcccCCCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCCCCChhhhhhcCCCcEEEeccCChhhhhcCCC
Q 011765 277 GSVVYVAFGSEAKPSQEELTEIALGLELSKLPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDS 356 (478)
Q Consensus 277 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~n~~~~~~vpq~~vL~~~~ 356 (478)
+|.|-|=+||.+ +....++..+.|++++.++-..+.. .-..|+.+. +|+...+ ...
T Consensus 2 ~P~V~IimGS~S--D~~v~~~a~~~L~~~gI~~e~~v~S--------AHR~p~~l~-----------~~~~~~e---~~~ 57 (159)
T d1u11a_ 2 APVVGIIMGSQS--DWETMRHADALLTELEIPHETLIVS--------AHRTPDRLA-----------DYARTAA---ERG 57 (159)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECC--------TTTCHHHHH-----------HHHHHTT---TTT
T ss_pred cCeEEEEeCCHh--hHHHHHHHHHHHHHhCCceEEEEeh--------HhhChHHHH-----------HHHHHHH---hcC
Confidence 345777788877 7778888999999999886554432 233444322 2222211 112
Q ss_pred ceeeeeccCh-hhHHH--HHHhCCcEeccccc---cchhhHHHHHhhc--CeEEEeeccCCCCcccHHHHHHHHHHHhcc
Q 011765 357 VGGFLTHAGW-SSVVE--ALQFGMPLIVLTCY---ADQGLNAKLLEEK--QIVELIPRDEGDGFFTRNSVAESLRLVLVE 428 (478)
Q Consensus 357 ~~~~ItHgG~-~s~~e--al~~GvP~l~~P~~---~DQ~~na~~v~~~--g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~ 428 (478)
++++|.=+|+ +.+-- |-..-.|+|++|.. .+..+.-.-+.++ |+.+..-.-..++-.++.-++..|- -+.
T Consensus 58 ~~viIa~AG~aaaLpgvva~~t~~PVIgvP~~~~~~~g~d~l~S~~qMP~g~pv~tv~vg~~~~~nAa~~A~~IL-~~~- 135 (159)
T d1u11a_ 58 LNVIIAGAGGAAHLPGMCAAWTRLPVLGVPVESRALKGMDSLLSIVQMPGGVPVGTLAIGASGAKNAALLAASIL-ALY- 135 (159)
T ss_dssp CCEEEEEEESSCCHHHHHHHHCSSCEEEEEECCTTTTTHHHHHHHHCCCTTSCCEECCSSHHHHHHHHHHHHHHH-GGG-
T ss_pred CeEEEEEecCCCCCccceeeecceeEEEeccccccccccccHHHHhhCcCCCCceEEEecCCchHHHHHHHHHHH-hcC-
Confidence 3337766665 32222 23345699999964 4667777777777 6654432110000023344443332 223
Q ss_pred cchHHHHHHHHHHHHHhc
Q 011765 429 EKGQIYRDKAKEMKGLFG 446 (478)
Q Consensus 429 ~~~~~~~~~a~~~~~~~~ 446 (478)
|++++++++++++.++
T Consensus 136 --d~~l~~kl~~~r~~~~ 151 (159)
T d1u11a_ 136 --NPALAARLETWRALQT 151 (159)
T ss_dssp --CHHHHHHHHHHHHHHH
T ss_pred --CHHHHHHHHHHHHHHH
Confidence 6899999999888765
|
| >d1o4va_ c.23.8.1 (A:) N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) family: N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) domain: N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) species: Thermotoga maritima [TaxId: 2336]
Probab=90.79 E-value=1.3 Score=34.71 Aligned_cols=140 Identities=14% Similarity=0.048 Sum_probs=79.1
Q ss_pred ceEEEEeCcccCCCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCCCCChhhhhhcCCCcEEEeccCChhhhhcCCCc
Q 011765 278 SVVYVAFGSEAKPSQEELTEIALGLELSKLPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSV 357 (478)
Q Consensus 278 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~n~~~~~~vpq~~vL~~~~~ 357 (478)
|.|.|-+||.+ +....+++.+.|+..+..+-..+.. .-..|+.+. +|+.... ...+
T Consensus 1 PkV~Ii~Gs~S--D~~~~~~a~~~L~~~gi~~~~~v~s--------aHr~p~rl~-----------~~~~~~~---~~~~ 56 (169)
T d1o4va_ 1 PRVGIIMGSDS--DLPVMKQAAEILEEFGIDYEITIVS--------AHRTPDRMF-----------EYAKNAE---ERGI 56 (169)
T ss_dssp CEEEEEESCGG--GHHHHHHHHHHHHHTTCEEEEEECC--------TTTCHHHHH-----------HHHHHTT---TTTC
T ss_pred CeEEEEECcHh--hHHHHHHHHHHHHHcCCcEEEEEee--------eecCHHHHH-----------HHHHHHH---hcCC
Confidence 35666778766 7888899999999999887655532 223444222 1221111 1122
Q ss_pred eeeeeccCh-hhHHH--HHHhCCcEecccccc---chhhHHHHHhhc--CeEEEeeccCCCCcccHHHHHHHHHHHhccc
Q 011765 358 GGFLTHAGW-SSVVE--ALQFGMPLIVLTCYA---DQGLNAKLLEEK--QIVELIPRDEGDGFFTRNSVAESLRLVLVEE 429 (478)
Q Consensus 358 ~~~ItHgG~-~s~~e--al~~GvP~l~~P~~~---DQ~~na~~v~~~--g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~ 429 (478)
+.+|.=+|+ +.+-- |-..-+|+|++|... +..+.-.-+.++ |+++..-.-+ +-.++.-++..|-. +.
T Consensus 57 ~viIa~AG~aa~LpgvvA~~t~~PVIgvP~~~~~~~G~daLlS~lqmp~gvpVatV~Id--~~~nAA~~A~~Il~-l~-- 131 (169)
T d1o4va_ 57 EVIIAGAGGAAHLPGMVASITHLPVIGVPVKTSTLNGLDSLFSIVQMPGGVPVATVAIN--NAKNAGILAASILG-IK-- 131 (169)
T ss_dssp CEEEEEEESSCCHHHHHHHHCSSCEEEEEECCTTTTTHHHHHHHHTCCTTCCCEECCTT--CHHHHHHHHHHHHH-TT--
T ss_pred eEEEEeecCCcCchHHHHHhcceeEEecccccccCccHHHHHHhccCCccCCceeeecC--chHHHHHHHHHHHh-CC--
Confidence 336655554 22222 223357999999853 445554555555 6555442211 01345555544433 24
Q ss_pred chHHHHHHHHHHHHHhcc
Q 011765 430 KGQIYRDKAKEMKGLFGD 447 (478)
Q Consensus 430 ~~~~~~~~a~~~~~~~~~ 447 (478)
|++++++.+++++.+.+
T Consensus 132 -d~~i~~kl~~~r~~~~~ 148 (169)
T d1o4va_ 132 -YPEIARKVKEYKERMKR 148 (169)
T ss_dssp -CHHHHHHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHHHHH
Confidence 68999999999988753
|
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Probab=85.00 E-value=2.8 Score=38.84 Aligned_cols=111 Identities=17% Similarity=0.143 Sum_probs=70.3
Q ss_pred cEEEeccCChhh---hhcCCCceeeee---ccChh-hHHHHHHhCCc-----EeccccccchhhHHHHHhhcCeEEEeec
Q 011765 339 GVVYTSWAPQLA---ILAHDSVGGFLT---HAGWS-SVVEALQFGMP-----LIVLTCYADQGLNAKLLEEKQIVELIPR 406 (478)
Q Consensus 339 n~~~~~~vpq~~---vL~~~~~~~~It---HgG~~-s~~eal~~GvP-----~l~~P~~~DQ~~na~~v~~~g~G~~l~~ 406 (478)
.+.+...+++.+ ++..+++ ++. .-|+| +..|++++|+| +|+-.+.+ -+. .++-|+.++.
T Consensus 332 ~v~~~~~~~~~~l~a~~~~Adv--~v~~s~~EG~~lv~~Ea~a~~~p~~~g~lIlS~~~G----~~~---~l~~g~lVnP 402 (456)
T d1uqta_ 332 LYYLNQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAG----AAN---ELTSALIVNP 402 (456)
T ss_dssp EEEECSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBG----GGG---TCTTSEEECT
T ss_pred eeeccCCcCHHHHhHHHhhhce--eecCCccCCCCcHHHHHHHhCCCCCCCcEEEeCCCC----CHH---HhCCeEEECc
Confidence 455666677754 4455666 553 45664 78999999999 44443332 111 1223667766
Q ss_pred cCCCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHhcc
Q 011765 407 DEGDGFFTRNSVAESLRLVLVEEKGQIYRDKAKEMKGLFGDKGRHDRYVDNFLNYLKNHR 466 (478)
Q Consensus 407 ~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 466 (478)
.+.+.++++|.++|+.. .++-+++.+++.+.+.+ .....=++.+++.+++..
T Consensus 403 ------~d~~~~A~ai~~aL~~~-~~er~~~~~~~~~~v~~-~~~~~W~~~fl~~l~~~~ 454 (456)
T d1uqta_ 403 ------YDRDEVAAALDRALTMS-LAERISRHAEMLDVIVK-NDINHWQECFISDLKQIV 454 (456)
T ss_dssp ------TCHHHHHHHHHHHHTCC-HHHHHHHHHHHHHHHHH-TCHHHHHHHHHHHHHHSC
T ss_pred ------CCHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHH-CCHHHHHHHHHHHHHhhc
Confidence 38999999999999731 23456666777777754 344555677777776543
|
| >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Thermotoga maritima [TaxId: 2336]
Probab=84.53 E-value=0.47 Score=33.05 Aligned_cols=31 Identities=13% Similarity=0.142 Sum_probs=27.4
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 011765 7 LQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFIS 41 (478)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~ 41 (478)
|||-|+-.++.| |.+||+.|+++||+|+-.-
T Consensus 2 ~~ihfiGIgG~G----Ms~LA~~L~~~G~~VsGSD 32 (89)
T d1j6ua1 2 MKIHFVGIGGIG----MSAVALHEFSNGNDVYGSN 32 (89)
T ss_dssp CEEEEETTTSHH----HHHHHHHHHHTTCEEEEEC
T ss_pred cEEEEEeECHHH----HHHHHHHHHhCCCeEEEEe
Confidence 799999888877 8889999999999998754
|
| >d1qcza_ c.23.8.1 (A:) N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) family: N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) domain: N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) species: Escherichia coli [TaxId: 562]
Probab=84.28 E-value=2.6 Score=32.63 Aligned_cols=139 Identities=12% Similarity=0.058 Sum_probs=75.7
Q ss_pred EEEEeCcccCCCHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCCCCChhhhhhcCCCcEEEeccCChhhhhcCCCcee
Q 011765 280 VYVAFGSEAKPSQEELTEIALGLELSKLPFFWVLKKRLGQADTEPIELPDGFEERTRGRGVVYTSWAPQLAILAHDSVGG 359 (478)
Q Consensus 280 v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~n~~~~~~vpq~~vL~~~~~~~ 359 (478)
|.|=+||.+ +....+++.+.|+.++..+-..+.. .-..|+.+. .|+.... ...+++
T Consensus 4 V~IImGS~S--D~~~~~~a~~~L~~~gI~~e~~v~S--------AHRtp~~l~-----------~~~~~~~---~~~~~V 59 (163)
T d1qcza_ 4 VAIVMGSKS--DWATMQFAAEIFEILNVPHHVEVVS--------AHRTPDKLF-----------SFAESAE---ENGYQV 59 (163)
T ss_dssp EEEEESSGG--GHHHHHHHHHHHHHHTCCEEEEECC--------TTTCHHHHH-----------HHHHHTT---TTTCSE
T ss_pred EEEEECcHh--hHHHHHHHHHHHHHcCCCeEEEEec--------cccCHHHHH-----------HHHHHHH---HcCCeE
Confidence 455578776 7888999999999999886555432 233454322 2222211 112233
Q ss_pred eeeccChh-hHHHHH--HhCCcEecccccc---chhhHHHHHhhc--CeEEEeeccCCCCcccHHHHHHHHHHHhcccch
Q 011765 360 FLTHAGWS-SVVEAL--QFGMPLIVLTCYA---DQGLNAKLLEEK--QIVELIPRDEGDGFFTRNSVAESLRLVLVEEKG 431 (478)
Q Consensus 360 ~ItHgG~~-s~~eal--~~GvP~l~~P~~~---DQ~~na~~v~~~--g~G~~l~~~~~~~~~~~~~l~~~i~~ll~~~~~ 431 (478)
||.=+|.- -+--.+ ..-+|+|++|... +-.+.-.-+.++ |+.+..-.-..++-.++.-++..|-. +. |
T Consensus 60 iIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~~~g~d~lls~~qMp~g~pv~tv~v~~~~~~nAal~A~~IL~-~~---d 135 (163)
T d1qcza_ 60 IIAGAGGAAHLPGMIAAKTLVPVLGVPVQSAALSGVDSLYSIVQMPRGIPVGTLAIGKAGAANAALLAAQILA-TH---D 135 (163)
T ss_dssp EEEEECSSCCHHHHHHHSCSSCEEEEECCCTTTTTHHHHHHHHTCCTTCCCEECCSSHHHHHHHHHHHHHHHH-TT---C
T ss_pred EEEeccCCCcccchhhHhccceeeeccccccccCCcchhhHHhhccCCCCceEEEEecCchHHHHHHHHHHHc-CC---C
Confidence 77766653 222222 2457999999854 444444555555 66544321110000234444443322 23 6
Q ss_pred HHHHHHHHHHHHHhc
Q 011765 432 QIYRDKAKEMKGLFG 446 (478)
Q Consensus 432 ~~~~~~a~~~~~~~~ 446 (478)
++++++++++++...
T Consensus 136 ~~l~~kl~~~r~~~~ 150 (163)
T d1qcza_ 136 KELHQRLNDWRKAQT 150 (163)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 899999998887654
|
| >d1ccwa_ c.23.6.1 (A:) Glutamate mutase, small subunit {Clostridium cochlearium [TaxId: 1494]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Cobalamin (vitamin B12)-binding domain family: Cobalamin (vitamin B12)-binding domain domain: Glutamate mutase, small subunit species: Clostridium cochlearium [TaxId: 1494]
Probab=83.17 E-value=0.74 Score=34.99 Aligned_cols=38 Identities=16% Similarity=0.023 Sum_probs=35.4
Q ss_pred ccEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 011765 6 KLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTP 43 (478)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~La~~L~~rGh~Vt~~~~~ 43 (478)
+.||++.+.++..|.....-++..|..+|++|++++..
T Consensus 3 k~kVvi~~~~gD~H~lG~~mva~~l~~~G~~V~~LG~~ 40 (137)
T d1ccwa_ 3 KKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVL 40 (137)
T ss_dssp CCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCEEEEEecCCChhHHHHHHHHHHHHHCCCeEEecccc
Confidence 56999999999999999999999999999999998864
|
| >d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) species: Escherichia coli [TaxId: 562]
Probab=81.26 E-value=0.67 Score=38.58 Aligned_cols=46 Identities=20% Similarity=0.280 Sum_probs=36.6
Q ss_pred CCCCCccEEEEecCCCccCHHH------------HHHHHHHHHhCCCeEEEEeCCCcc
Q 011765 1 MADNSKLQIAMFPWLAFGHMIP------------WLELAKLIAQKGHKIFFISTPRNI 46 (478)
Q Consensus 1 ~~~~~~~~il~~~~~~~gH~~p------------~l~La~~L~~rGh~Vt~~~~~~~~ 46 (478)
|.+=+.+|||+...|..-++.| -..||+++..+||+||+++.+...
T Consensus 1 ~~dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~ 58 (223)
T d1u7za_ 1 VNDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL 58 (223)
T ss_dssp CCTTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC
T ss_pred CcccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhccccc
Confidence 3444567888888777777666 578999999999999999988754
|
| >d1gsaa1 c.30.1.3 (A:1-122) Prokaryotic glutathione synthetase, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: Prokaryotic glutathione synthetase, N-terminal domain domain: Prokaryotic glutathione synthetase, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=80.03 E-value=0.94 Score=33.57 Aligned_cols=41 Identities=2% Similarity=-0.033 Sum_probs=33.0
Q ss_pred ccEEEEecCCCc---cCHHHHHHHHHHHHhCCCeEEEEeCCCcc
Q 011765 6 KLQIAMFPWLAF---GHMIPWLELAKLIAQKGHKIFFISTPRNI 46 (478)
Q Consensus 6 ~~~il~~~~~~~---gH~~p~l~La~~L~~rGh~Vt~~~~~~~~ 46 (478)
+|||+|+.=|-. =.-.-++.|+++.++|||+|.++.+....
T Consensus 1 mmkI~FimDpie~l~~~kDTT~~Lm~eAq~Rg~~v~~~~~~dL~ 44 (122)
T d1gsaa1 1 MIKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMGDLY 44 (122)
T ss_dssp CCEEEEECSCGGGCCTTTCHHHHHHHHHHHTTCEEEEECGGGEE
T ss_pred CcEEEEEeCCHHHCCCCCChHHHHHHHHHHCCCeEEEEecCceE
Confidence 589999866533 45667899999999999999999877653
|