Citrus Sinensis ID: 011782


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------
MSRVGSECFRWRLLAAAFIGLLVVASVSVSAQSNLKPEATSKNKNDHVEPNIVIKVSAPKSRSGYKHVWPDIKFGWRIVVGTIIGFFGTACGSVGGVGGGGIFVPMLNLIVGFDAKSSAAVSKCMVTGGAVSAVVYNLRQRHPTLDIPVIDYDLALLFQPLLVLGISIGVAFNVIFADWMITVLLIVLFLVLSTRAFLKGVETWKKETITKREAAKQLELIGNGYQTEECKCDPEYLSNDTTPEETREPKKSKVSIIENIYWKEFGLLVAVWAIILALQIAKNYTTTCSVLYWVLNLLQIPVAGGVSAYEAVALYKGRRKIASKGDEGTKWRASQLVFYCACGITAGMVGGLLGLGGGFILGPLFLELGIPPQVSSATALFAITFSSSMSVVEYYLLKRFPVPYALYFFALSIIAAFVGQHVLKKLIKILGRASIIIFTLSFIIFVSALSLGGVGLAKMIKRIEHKEYMGFDNICYT
ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccHHHcHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccc
ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHccccHcHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHEEccccccccccHHHEEHHHHHHHHHHHHHHHHcccHHHHHcHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccc
msrvgsecFRWRLLAAAFIGLLVVASVSVsaqsnlkpeatsknkndhvepnivikvsapksrsgykhvwpdikfgWRIVVGTIIGFFGtacgsvggvggggifVPMLNLIVGFDAKSSAAVSKCMVTGGAVSAVVYNLrqrhptldipviDYDLALLFQPLLVLGISIGVAFNVIFADWMITVLLIVLFLVLSTRAFLKGVETWKKETITKREAAKQLELIgngyqteeckcdpeylsndttpeetrepkksKVSIIENIYWKEFGLLVAVWAIILALQIAKNYTTTCSVLYWVLNLLQIPVAGGVSAYEAVALYKGRRKiaskgdegtkWRASQLVFYCACGITAGMVGgllglgggfilgplflelgippqvssaTALFAITFSSSMSVVEYYLLkrfpvpyaLYFFALSIIAAFVGQHVLKKLIKILGRASIIIFTLSFIIFVSALSLGGVGLAKMIKRIEhkeymgfdnicyt
MSRVGSECFRWRLLAAAFIGLLVVASVSVSAQSnlkpeatsknkndhvepnivikvsapksrsgykhVWPDIKFGWRIVVGTIIGFFGTACGSVGGVGGGGIFVPMLNLIVGFDAKSSAAVSKCMVTGGAVSAVVYNLRQRHPTLDIPVIDYDLALLFQPLLVLGISIGVAFNVIFADWMITVLLIVLFLVLSTRAFLKGVETWKKETITKREAAKQLELigngyqteeckcdpeylsndttpeetrepkkskvSIIENIYWKEFGLLVAVWAIILALQIAKNYTTTCSVLYWVLNLLQIPVAGGVSAYEAVALYKGRRKiaskgdegtkwRASQLVFYCACGITAGMVGGLLGLGGGFILGPLFLELGIPPQVSSATALFAITFSSSMSVVEYYLLKRFPVPYALYFFALSIIAAFVGQHVLKKLIKILGRASIIIFTLSFIIFVSALSLGGVGLAKMIKriehkeymgfdnicyt
MSRVGSECFRWRLLAAAFIGLLvvasvsvsaqsNLKPEATSKNKNDHVEPNIVIKVSAPKSRSGYKHVWPDIKFGWRIVVGTIIGFFGTACgsvggvggggIFVPMLNLIVGFDAKSSAAVSKCMVTGGAVSAVVYNLRQRHPTLDIPVIDYDLALLFQPLLVLGISIGVAFNVIFADWMITvllivlflvlSTRAFLKGVETWKKETITKREAAKQLELIGNGYQTEECKCDPEYLSNDTTPEETREPKKSKVSIIENIYWKEFGllvavwaiilalqiaKNYTTTCSVLYWVLNLLQIPVAGGVSAYEAVALYKGRRKIASKGDEGTKWRASQLVFYCACGITAGMVggllglgggfilgplflelgipPQVSSATALFAITFSSSMSVVEYYLLKRFPVPYALYFFALSIIAAFVGQHVLKKLIKILGRAsiiiftlsfiifvsALSLGGVGLAKMIKRIEHKEYMGFDNICYT
******ECFRWRLLAAAFIGLLVVASVSV**********************IVIKVS****RSGYKHVWPDIKFGWRIVVGTIIGFFGTACGSVGGVGGGGIFVPMLNLIVGFDAKSSAAVSKCMVTGGAVSAVVYNLRQRHPTLDIPVIDYDLALLFQPLLVLGISIGVAFNVIFADWMITVLLIVLFLVLSTRAFLKGVETWKKETITKREAAKQLELIGNGYQTEECKC*********************VSIIENIYWKEFGLLVAVWAIILALQIAKNYTTTCSVLYWVLNLLQIPVAGGVSAYEAVALYKGRRKIASKGDEGTKWRASQLVFYCACGITAGMVGGLLGLGGGFILGPLFLELGIPPQVSSATALFAITFSSSMSVVEYYLLKRFPVPYALYFFALSIIAAFVGQHVLKKLIKILGRASIIIFTLSFIIFVSALSLGGVGLAKMIKRIEHKEYMGFDNICY*
******E**RWRLLAAAFIGLLVVASVSVSAQS*********************KVSAPKSRSGYKHVWPDIKFGWRIVVGTIIGFFGTACGSVGGVGGGGIFVPMLNLIVGFDAKSSAAVSKCMVTGGAVSAVVYNLRQRHPTLDIPVIDYDLALLFQPLLVLGISIGVAFNVIFADWMITVLLIVLFLVLSTRAFLKGVETW*****************************************************ENIYWKEFGLLVAVWAIILALQIAKNYTTTCSVLYWVLNLLQIPVAGGVSAYEAVALYKGRRKIASKGDEGTKWRASQLVFYCACGITAGMVGGLLGLGGGFILGPLFLELGIPPQVSSATALFAITFSSSMSVVEYYLLKRFPVPYALYFFALSIIAAFVGQHVLKKLIKILGRASIIIFTLSFIIFVSALSLGGVGLAKMIKRIEHKEYMGFDNIC**
MSRVGSECFRWRLLAAAFIGLLVVASVSVSAQSNLKPEATSKNKNDHVEPNIVIKVSAPKSRSGYKHVWPDIKFGWRIVVGTIIGFFGTACGSVGGVGGGGIFVPMLNLIVGFDAKSSAAVSKCMVTGGAVSAVVYNLRQRHPTLDIPVIDYDLALLFQPLLVLGISIGVAFNVIFADWMITVLLIVLFLVLSTRAFLKGVETWKKETITKREAAKQLELIGNGYQTEECKCDPEYLS**************KVSIIENIYWKEFGLLVAVWAIILALQIAKNYTTTCSVLYWVLNLLQIPVAGGVSAYEAVALYKGRRK*********KWRASQLVFYCACGITAGMVGGLLGLGGGFILGPLFLELGIPPQVSSATALFAITFSSSMSVVEYYLLKRFPVPYALYFFALSIIAAFVGQHVLKKLIKILGRASIIIFTLSFIIFVSALSLGGVGLAKMIKRIEHKEYMGFDNICYT
**RVGSECFRWRLLAAAFIGLLVVASVSVSAQSNLKP*********HVEPNIVIKVSAPKSRSGYKHVWPDIKFGWRIVVGTIIGFFGTACGSVGGVGGGGIFVPMLNLIVGFDAKSSAAVSKCMVTGGAVSAVVYNLRQRHPTLDIPVIDYDLALLFQPLLVLGISIGVAFNVIFADWMITVLLIVLFLVLSTRAFLKGVETWKKETITKREAA*****************************ETREPKKSKVSIIENIYWKEFGLLVAVWAIILALQIAKNYTTTCSVLYWVLNLLQIPVAGGVSAYEAVALYKGRRKIASKGDEGTKWRASQLVFYCACGITAGMVGGLLGLGGGFILGPLFLELGIPPQVSSATALFAITFSSSMSVVEYYLLKRFPVPYALYFFALSIIAAFVGQHVLKKLIKILGRASIIIFTLSFIIFVSALSLGGVGLAKMIKRIEHKEYMGFDNICYT
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiii
ooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MSRVGSECFRWRLLAAAFIGLLVVASVSVSAQSNLKPEATSKNKNDHVEPNIVIKVSAPKSRSGYKHVWPDIKFGWRIVVGTIIGFFGTACGSVGGVGGGGIFVPMLNLIVGFDAKSSAAVSKCMVTGGAVSAVVYNLRQRHPTLDIPVIDYDLALLFQPLLVLGISIGVAFNVIFADWMITVLLIVLFLVLSTRAFLKGVETWKKETITKREAAKQLELIGNGYQTEECKCDPEYLSNDTTPEETREPKKSKVSIIENIYWKEFGLLVAVWAIILALQIAKNYTTTCSVLYWVLNLLQIPVAGGVSAYEAVALYKGRRKIASKGDEGTKWRASQLVFYCACGITAGMVGGLLGLGGGFILGPLFLELGIPPQVSSATALFAITFSSSMSVVEYYLLKRFPVPYALYFFALSIIAAFVGQHVLKKLIKILGRASIIIFTLSFIIFVSALSLGGVGLAKMIKRIEHKEYMGFDNICYT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query477
255549968483 conserved hypothetical protein [Ricinus 0.993 0.981 0.683 1e-167
225442593481 PREDICTED: uncharacterized protein LOC10 0.993 0.985 0.684 1e-166
224070901426 predicted protein [Populus trichocarpa] 0.867 0.971 0.750 1e-160
337733644353 hypothetical protein [Citrus trifoliata] 0.733 0.991 0.837 1e-156
225430021478 PREDICTED: uncharacterized protein LOC10 0.949 0.947 0.673 1e-155
224092328479 predicted protein [Populus trichocarpa] 0.966 0.962 0.639 1e-152
356556244476 PREDICTED: uncharacterized protein LOC10 0.966 0.968 0.646 1e-150
255551046476 conserved hypothetical protein [Ricinus 0.962 0.964 0.627 1e-150
356547396487 PREDICTED: uncharacterized protein LOC10 0.937 0.917 0.637 1e-149
224059076424 predicted protein [Populus trichocarpa] 0.867 0.976 0.721 1e-149
>gi|255549968|ref|XP_002516035.1| conserved hypothetical protein [Ricinus communis] gi|223544940|gb|EEF46455.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
 Score =  593 bits (1529), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 328/480 (68%), Positives = 393/480 (81%), Gaps = 6/480 (1%)

Query: 1   MSRVGSE--CFRWRLLAAAFIGLLVVASVSVSAQSNLKPEATSKNKNDHVEPNIVIKVSA 58
           M+ +GSE      R + A+ I  + V S+++ +++  + E +S   ++ VE   +++V  
Sbjct: 1   MAMIGSEWKSLSLRYVKASLICFIGVVSMTIVSEARQQQEGSSDRNSEDVESAFLMRVVN 60

Query: 59  ---PKSRSGYKHVWPDIKFGWRIVVGTIIGFFGTACGSVGGVGGGGIFVPMLNLIVGFDA 115
               K + GY HVWPD+KFGW+IVVG+IIGFFG A GSVGGVGGGGIFVPML LI+GFDA
Sbjct: 61  FLWQKGQLGYTHVWPDMKFGWQIVVGSIIGFFGAAFGSVGGVGGGGIFVPMLTLIIGFDA 120

Query: 116 KSSAAVSKCMVTGGAVSAVVYNLRQRHPTLDIPVIDYDLALLFQPLLVLGISIGVAFNVI 175
           KSS A+SKCM+TG A S V YNL+ RHPTLD+P+IDYDLALLFQP+LVLGISIGVAFNVI
Sbjct: 121 KSSTAISKCMITGAAASTVYYNLKLRHPTLDMPIIDYDLALLFQPVLVLGISIGVAFNVI 180

Query: 176 FADWMITVLLIVLFLVLSTRAFLKGVETWKKETITKREAAKQLELIGNGYQTEECKCDPE 235
           FADWMITVLLI+LF+  ST+AFLKGVETWKKETI K+EAA++L   G   +  E K  P 
Sbjct: 181 FADWMITVLLIILFIGTSTKAFLKGVETWKKETIIKKEAARRLASNGGASEEVEYKPLPG 240

Query: 236 YLSNDTTPEETREPKKSKVSIIENIYWKEFGLLVAVWAIILALQIAKNYTTTCSVLYWVL 295
             +N T PE + EPK+ +VSIIEN+ WKE G+L AVW IILAL+I KNYTTTCSV+YWV 
Sbjct: 241 GPTNGTGPE-SNEPKREEVSIIENVRWKELGILFAVWLIILALEITKNYTTTCSVVYWVC 299

Query: 296 NLLQIPVAGGVSAYEAVALYKGRRKIASKGDEGTKWRASQLVFYCACGITAGMVGGLLGL 355
           NLLQIPVA GVS+Y+AV+LYKG+R+IASKG+ GT WR  QLV YCACG+ AGMVGGLLGL
Sbjct: 300 NLLQIPVALGVSSYQAVSLYKGKRRIASKGEAGTNWRVHQLVLYCACGVLAGMVGGLLGL 359

Query: 356 GGGFILGPLFLELGIPPQVSSATALFAITFSSSMSVVEYYLLKRFPVPYALYFFALSIIA 415
           GGGFILGPLFLELG+PPQVSSATA FA+TFS+SMSV+EYYLLKRFPVPYALYF A+S IA
Sbjct: 360 GGGFILGPLFLELGVPPQVSSATATFAMTFSASMSVIEYYLLKRFPVPYALYFVAVSTIA 419

Query: 416 AFVGQHVLKKLIKILGRASIIIFTLSFIIFVSALSLGGVGLAKMIKRIEHKEYMGFDNIC 475
           AFVGQHV+++LI ILGRAS+IIF LSF IFVSA+SLGGVG+A MI++IE+ EYMGFDNIC
Sbjct: 420 AFVGQHVVRRLISILGRASLIIFILSFTIFVSAISLGGVGIANMIEKIENHEYMGFDNIC 479




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225442593|ref|XP_002284423.1| PREDICTED: uncharacterized protein LOC100266912 [Vitis vinifera] gi|297743252|emb|CBI36119.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224070901|ref|XP_002303288.1| predicted protein [Populus trichocarpa] gi|222840720|gb|EEE78267.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|337733644|gb|AEI72271.1| hypothetical protein [Citrus trifoliata] Back     alignment and taxonomy information
>gi|225430021|ref|XP_002284175.1| PREDICTED: uncharacterized protein LOC100267889 [Vitis vinifera] gi|296081886|emb|CBI20891.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224092328|ref|XP_002309560.1| predicted protein [Populus trichocarpa] gi|222855536|gb|EEE93083.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356556244|ref|XP_003546436.1| PREDICTED: uncharacterized protein LOC100816528 [Glycine max] Back     alignment and taxonomy information
>gi|255551046|ref|XP_002516571.1| conserved hypothetical protein [Ricinus communis] gi|223544391|gb|EEF45912.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|356547396|ref|XP_003542098.1| PREDICTED: uncharacterized protein LOC100789733 [Glycine max] Back     alignment and taxonomy information
>gi|224059076|ref|XP_002299704.1| predicted protein [Populus trichocarpa] gi|222846962|gb|EEE84509.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query477
TAIR|locus:504956017476 AT2G25737 [Arabidopsis thalian 0.853 0.855 0.543 3.6e-112
TAIR|locus:2040605459 AT2G36630 [Arabidopsis thalian 0.853 0.886 0.412 5.8e-82
TAIR|locus:2127343449 AT4G21250 "AT4G21250" [Arabido 0.735 0.781 0.268 6.2e-30
TAIR|locus:2195773458 AT1G61740 [Arabidopsis thalian 0.821 0.855 0.227 1e-24
DICTYBASE|DDB_G0269644549 DDB_G0269644 [Dictyostelium di 0.821 0.714 0.217 2.9e-23
TAIR|locus:2200061367 AT1G11540 "AT1G11540" [Arabido 0.213 0.277 0.359 8.8e-20
TAIR|locus:2127348393 AT4G21260 "AT4G21260" [Arabido 0.203 0.246 0.352 3.8e-15
TAIR|locus:504956017 AT2G25737 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1107 (394.7 bits), Expect = 3.6e-112, P = 3.6e-112
 Identities = 224/412 (54%), Positives = 269/412 (65%)

Query:    64 GYKHVWPDIKFGWRIVVGTIIGFFGTACXXXXXXXXXXIFVPMLNLIVGFDAKSSAAVSK 123
             GY+HVWP+ +F W+IV+GT++GFFG A           IFVPML+LI+GFD KS+ A+SK
Sbjct:    66 GYRHVWPEFEFNWQIVLGTLVGFFGAAFGSVGGVGGGGIFVPMLSLIIGFDPKSATAISK 125

Query:   124 CMVTGGAVSAVVYNLRQRHPTLDIPVIDYDLALLFQPLLVLGISIGVAFNVIFADWMITX 183
             CM+ G +VS V YNLR RHPTLD+P+IDYDLALL QP+L+LGISIGVAFNVIF DW++T 
Sbjct:   126 CMIMGASVSTVYYNLRLRHPTLDMPIIDYDLALLIQPMLMLGISIGVAFNVIFPDWLVTV 185

Query:   184 XXXXXXXXXSTRAFLKGVETWKKETITKREAAKQLELIGNGYQTEECKCDPEYLSNDTTP 243
                      ST+AFLKG ETW KETI K+EAAK+LE   NG    E +  P   +  T P
Sbjct:   186 LLIVLFLGTSTKAFLKGSETWNKETIEKKEAAKRLE--SNGVSGTEVEYVPLPAAPSTNP 243

Query:   244 EETREPKKSKVSIIENIYWKEFGXXXXXXXXXXXXXXXKNYTTTCSVLYWVLNLLQIPVA 303
                   KK +VSIIEN+YWKE G               K     CSV YWV+NLLQIPVA
Sbjct:   244 GNK---KKEEVSIIENVYWKELGLLVFVWIVFLALQISKQNLANCSVAYWVINLLQIPVA 300

Query:   304 GGVSAYEAVALYKGRRKIASKGDEGTKWRASQLVFYCACGITAGMVXXXXXXXXXXXXXX 363
              GVS YEAVALY+GRR IASKG   + +   QLV YC  GI AG+V              
Sbjct:   301 VGVSGYEAVALYQGRRIIASKGQGDSNFTVGQLVMYCTFGIIAGIVGGLLGLGGGFIMGP 360

Query:   364 XXXXXXXXPQVSSATALFAITFSSSMSVVEYYLLKRFPVPYALYFFALSIIAAFVGQHVL 423
                     PQVSSATA FA+TFSSSMSVVEYYLLKRFPVPYALY   ++ IAA+VGQHV+
Sbjct:   361 LFLELGVPPQVSSATATFAMTFSSSMSVVEYYLLKRFPVPYALYLVGVATIAAWVGQHVV 420

Query:   424 KKLIKILGRAXXXXXXXXXXXXXXALSLGGVGLAKMIKRIEHKEYMGFDNIC 475
             ++LI  +GRA              A+SLGGVG+  MI +I+  EYMGF+N+C
Sbjct:   421 RRLIAAIGRASLIIFILASMIFISAISLGGVGIVNMIGKIQRHEYMGFENLC 472




GO:0009507 "chloroplast" evidence=ISM
GO:0016021 "integral to membrane" evidence=IEA
TAIR|locus:2040605 AT2G36630 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2127343 AT4G21250 "AT4G21250" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2195773 AT1G61740 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0269644 DDB_G0269644 [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
TAIR|locus:2200061 AT1G11540 "AT1G11540" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2127348 AT4G21260 "AT4G21260" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query477
pfam01925236 pfam01925, TauE, Sulfite exporter TauE/SafE 2e-10
COG0730 258 COG0730, COG0730, Predicted permeases [General fun 1e-08
pfam01925236 pfam01925, TauE, Sulfite exporter TauE/SafE 3e-08
pfam01925236 pfam01925, TauE, Sulfite exporter TauE/SafE 4e-07
COG0730258 COG0730, COG0730, Predicted permeases [General fun 1e-06
COG0730258 COG0730, COG0730, Predicted permeases [General fun 9e-06
pfam01925236 pfam01925, TauE, Sulfite exporter TauE/SafE 7e-05
>gnl|CDD|216790 pfam01925, TauE, Sulfite exporter TauE/SafE Back     alignment and domain information
 Score = 60.7 bits (148), Expect = 2e-10
 Identities = 27/108 (25%), Positives = 44/108 (40%)

Query: 339 YCACGITAGMVGGLLGLGGGFILGPLFLELGIPPQVSSATALFAITFSSSMSVVEYYLLK 398
               G+ AG + GL G GGG I  PL L L  PP V+  T+L A+  +S    + +    
Sbjct: 1   LLLAGLLAGFLAGLAGFGGGLIAVPLLLLLLGPPHVAVGTSLLAVIATSLSGALAHRRRG 60

Query: 399 RFPVPYALYFFALSIIAAFVGQHVLKKLIKILGRASIIIFTLSFIIFV 446
                  L      ++ A +G  +L  L   + +    +  L   + +
Sbjct: 61  NVDWRLLLRLLLGGLLGALLGALLLLLLPGAVLKLLFGVLLLLAALLM 108


This is a family of integral membrane proteins where the alignment appears to contain two duplicated modules of three transmembrane helices. The proteins are involved in the transport of anions across the cytoplasmic membrane during taurine metabolism as an exporter of sulfoacetate. This family used to be known as DUF81. Length = 236

>gnl|CDD|223802 COG0730, COG0730, Predicted permeases [General function prediction only] Back     alignment and domain information
>gnl|CDD|216790 pfam01925, TauE, Sulfite exporter TauE/SafE Back     alignment and domain information
>gnl|CDD|216790 pfam01925, TauE, Sulfite exporter TauE/SafE Back     alignment and domain information
>gnl|CDD|223802 COG0730, COG0730, Predicted permeases [General function prediction only] Back     alignment and domain information
>gnl|CDD|223802 COG0730, COG0730, Predicted permeases [General function prediction only] Back     alignment and domain information
>gnl|CDD|216790 pfam01925, TauE, Sulfite exporter TauE/SafE Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 477
PRK10621266 hypothetical protein; Provisional 99.96
COG0730258 Predicted permeases [General function prediction o 99.96
PF01925240 TauE: Sulfite exporter TauE/SafE; InterPro: IPR002 99.94
PRK10621266 hypothetical protein; Provisional 99.32
COG0730258 Predicted permeases [General function prediction o 99.24
PF01925240 TauE: Sulfite exporter TauE/SafE; InterPro: IPR002 99.01
PF02673259 BacA: Bacitracin resistance protein BacA; InterPro 91.4
PF04018257 DUF368: Domain of unknown function (DUF368); Inter 91.33
PRK00281268 undecaprenyl pyrophosphate phosphatase; Reviewed 87.09
COG1968270 BacA Undecaprenyl pyrophosphate phosphatase [Lipid 85.92
>PRK10621 hypothetical protein; Provisional Back     alignment and domain information
Probab=99.96  E-value=1.7e-27  Score=236.44  Aligned_cols=234  Identities=18%  Similarity=0.229  Sum_probs=197.4

Q ss_pred             HHHHHHHHHHHHHHhhccCcccchhhHHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccHHHHH
Q 011782           77 RIVVGTIIGFFGTACGSVGGVGGGGIFVPMLNLIVGFDAKSSAAVSKCMVTGGAVSAVVYNLRQRHPTLDIPVIDYDLAL  156 (477)
Q Consensus        77 ~~~i~~~ig~l~g~i~~~~GiGGG~i~vP~L~~~~g~p~~~Av~ts~~~i~~~s~~~~~~~~~~~~p~~~~p~id~~l~l  156 (477)
                      ..+..+++|+++|+++++.| |||.+.+|+|. .+|+||++|++||++.++.+++++.+.|.|+++       +||+...
T Consensus        11 ~~~~l~~~g~~aG~l~gl~G-GGg~i~vP~L~-~~g~~~~~Av~tsl~~~~~~~~~~~~~~~~~~~-------v~~~~~~   81 (266)
T PRK10621         11 LLGVLFFVAMLAGFIDSIAG-GGGLLTIPALL-AAGMSPAQALATNKLQACGGSFSASLYFIRRKV-------VNLADQK   81 (266)
T ss_pred             HHHHHHHHHHHHHHHhhhcc-ccHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCC-------CCHHHHH
Confidence            34566678888999999999 99999999998 579999999999999999999999999889898       9999999


Q ss_pred             HHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHHHHhHHHhHhhhhhHHHHHHHHhhhcCCCCCccccCCCCC
Q 011782          157 LFQPLLVLGISIGVAFNVIFADWMITVLLIVLFLVLSTRAFLKGVETWKKETITKREAAKQLELIGNGYQTEECKCDPEY  236 (477)
Q Consensus       157 ~~~~~~~~G~~iGa~l~~~lp~~~l~~l~~illl~~~~~~~~k~~~~~kke~~~~~e~~~~~~~~~~~~~~~~~~~~~~~  236 (477)
                      .+.+++++|+.+|+++..++|++.++.+++++++..+.+++.+      ++.  ++                    +  +
T Consensus        82 ~l~~~~l~Ga~~G~~l~~~l~~~~l~~~~~~~ll~~~~~~l~~------~~~--~~--------------------~--~  131 (266)
T PRK10621         82 LNIAMTFVGSMSGALLVQYVQADILRQILPILVIGIGLYFLLM------PKL--GE--------------------E--D  131 (266)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHC------Ccc--cc--------------------c--c
Confidence            9999999999999999999999999999999888887765432      100  00                    0  0


Q ss_pred             CCCCCCCccccCccccchhHHhhhhHHHHHHHHHHHHHHHHHHHhhccccccchhHHHHhhhhccccchhhHHHHHHHHh
Q 011782          237 LSNDTTPEETREPKKSKVSIIENIYWKEFGLLVAVWAIILALQIAKNYTTTCSVLYWVLNLLQIPVAGGVSAYEAVALYK  316 (477)
Q Consensus       237 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~i~k~~~~~cs~~yw~l~~~~~pv~~~~~~~~~~~l~~  316 (477)
                      +             +++                                                               
T Consensus       132 ~-------------~~~---------------------------------------------------------------  135 (266)
T PRK10621        132 R-------------QRR---------------------------------------------------------------  135 (266)
T ss_pred             c-------------ccc---------------------------------------------------------------
Confidence            0             000                                                               


Q ss_pred             hhhccccCCCCCcccchhhHHHHHHHHHHHHHHHhhhccccchhhHHHH-hhcCCChHHHHHHHHHHHHHHHHHHHHHHH
Q 011782          317 GRRKIASKGDEGTKWRASQLVFYCACGITAGMVGGLLGLGGGFILGPLF-LELGIPPQVSSATALFAITFSSSMSVVEYY  395 (477)
Q Consensus       317 ~~~~~~~~g~~~~~~~~~~~~~~~l~G~~aG~isGllGiGGG~i~~Pll-l~~Gi~p~vAsATs~~~~~fss~~s~~~y~  395 (477)
                                    ++.  .......|+.+|+++|++|+|||++++|.+ ..++.|++++.+|+++..++++..++..|.
T Consensus       136 --------------~~~--~~~~~~~G~~~G~lsG~~G~GgG~~~v~~l~~~~~~~~~~a~~ts~~~~~~~~~~~~~~~~  199 (266)
T PRK10621        136 --------------LYG--LPFALIAGGCVGFYDGFFGPGAGSFYALAFVTLCGFNLAKATAHAKVLNATSNIGGLLLFI  199 (266)
T ss_pred             --------------ccc--hHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                          000  001234689999999999999999999877 577999999999999999999999999999


Q ss_pred             HhcCcchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Q 011782          396 LLKRFPVPYALYFFALSIIAAFVGQHVLKKLIKILGRASIIIFTLS  441 (477)
Q Consensus       396 ~~G~i~~~~al~l~~~a~iga~lG~~l~~kl~~~~~r~~lii~ll~  441 (477)
                      ..|.+||..++.+.+++++|+++|.++.+|++++..|+.+..+++.
T Consensus       200 ~~G~v~~~~~l~l~~g~~~G~~lG~~l~~~~~~~~lr~~~~~ll~~  245 (266)
T PRK10621        200 LGGKVIWATGFVMLVGQFLGARLGARLVLSKGQKLIRPMIVIVSAV  245 (266)
T ss_pred             hCCeehHHHHHHHHHHHHHHHHHHHHHHHHcCchHhHHHHHHHHHH
Confidence            9999999999999999999999999999999999999988775543



>COG0730 Predicted permeases [General function prediction only] Back     alignment and domain information
>PF01925 TauE: Sulfite exporter TauE/SafE; InterPro: IPR002781 This family is found in integral membrane proteins of prokaryotes which are uncharacterised Back     alignment and domain information
>PRK10621 hypothetical protein; Provisional Back     alignment and domain information
>COG0730 Predicted permeases [General function prediction only] Back     alignment and domain information
>PF01925 TauE: Sulfite exporter TauE/SafE; InterPro: IPR002781 This family is found in integral membrane proteins of prokaryotes which are uncharacterised Back     alignment and domain information
>PF02673 BacA: Bacitracin resistance protein BacA; InterPro: IPR003824 This is a family of small, highly hydrophobic proteins Back     alignment and domain information
>PF04018 DUF368: Domain of unknown function (DUF368); InterPro: IPR007163 This is a predicted transmembrane family of unknown function Back     alignment and domain information
>PRK00281 undecaprenyl pyrophosphate phosphatase; Reviewed Back     alignment and domain information
>COG1968 BacA Undecaprenyl pyrophosphate phosphatase [Lipid transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00