Citrus Sinensis ID: 011826

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470------
MTFFFHYLTRNNRFSKRRKSLKSAAAQNSSSSGRDDEQQQLAAYHYSTIIDLPSHILIDILSRLPLKSIFISRCVCKTWHILISDPLFATLHFDRNSGSNPELYLRTDFSTCISRTLHWVDLESFPGYNHAQCQWAKINAQFYLPKRYPKPNPKACTSNGNSNRGNRRAGREYDIVNSCNGFLCLRKPFHRNPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYSLGGAAWRKVGNAPWSPIAGLFPTYLNGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVIPAPPHFAEKPKTRDNLYDMNLGVLGGCLSICDVTYFAPPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDDGSLLLFCKRRALVLYNPVEKNTRYLLIHEDQSMIFEAITHVPSFLSLKDVGGDNLTVQNINSRSDQFEPEESETLFLIEMRKAGELLY
cEEEEEEEEEEccccccHHcHHHHHHcccccccccHHHHHHHHccccccccccHHHHHHHHccccHHHHHHHcccHHHHHHHHccHHHHHHHHHcccccccEEEEEEccccccccccEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEccccEEEEEEccccccEEEEEcccccEEEccccccccccccccEEEEEEEEccccccEEEEEEEEccccccEEEEEEcccccEEEccccccccccccccEEEcccEEEEEEccccccccccEEEEEEccccEEEEEccccccccccccccccEEcEEEEEcccEEEEEEcccccEEEEEEccccccccEEEEEEEccccccccEEEEEEEcccEEEEEEccEEEEEEccccEEEEEEEEEcccccEEEEEEEcccccccccccccEEEEEccccccccccccHHHHHHHHHHHcccccc
ccEEEEEccccccccHHHcccccccccccccccccccccccccccccccccccHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccHHHHHHHHcccccccEEEEEEcEEEEEEcccccEcccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEcccEEEEEEEccccccEEEEccccccEEEcccccccccccccEEEEEEEccccccccEEEEEEEEccccccEEEEEEccccccEEEEccccccccccccEEEEEEEEEEEEEccccccccEEEEEEEccccccccccccccccccccccccEEEEEEEEEccEEEEEEEccccEEEEEEEEcccccccEEEEEEEcccccccccEEEEEEcccEEEEEcccEEEEEEcccccEEEEEEEEcccccEEEEEEcccEEEEcccccccEEEEccccHHHcccHHHHHHHHHHHHHccccccc
mtfffhyltrnNRFSKRRKSLKSAAaqnssssgrddEQQQLAAYHYSTIIDLPSHILIDIlsrlplksiFISRCvcktwhilisdplfatlhfdrnsgsnpelylrtDFSTcisrtlhwvdlesfpgynhaqCQWAKINaqfylpkrypkpnpkactsngnsnrgnrragreydivnscngflclrkpfhrnpciicnpitgeyvtipkpaaeddkKTLRTVISGfgysfrskQYKVLRLVFDDFLNRTAEIYSLGGAAWrkvgnapwspiaglfptylnGVIHWVCddieddqscsdcivgfdfederfcvipapphfaekpktrdnlydmnlgvlggclsicdvtyfappdiwvmKDYGVQESWIKQlsvdngyfgicrpikylddgslllFCKRRALVlynpvekntRYLLIHEDQSMIFEAIThvpsflslkdvggdnltvqninsrsdqfepeesETLFLIEMRKAGELLY
mtfffhyltrnnrfskrRKSLKSaaaqnssssgrddEQQQLAAYHYSTIIDLPSHILIDILSRLPLKSIFISRCVCKTWHILISDPLFATLHFDRNSGSNPELYLRTDFSTCISRTLHWVDLESFPGYNHAQCQWAKINAQFYLPKRYPKpnpkactsngnsnrgnrraGREYDIVNSCNGFLCLRKPFHRNPCIICNPITGEYVTIPKPAAEDDKKTLRTVISgfgysfrskqyKVLRLVFDDFLNRTAEIYSLGGAAWRKVGNAPWSPIAGLFPTYLNGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVIPAPphfaekpktrDNLYDMNLGVLGGCLSICDVTYFAPPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDDGSLLLFCKRRALVLYNPVEKNTRYLLIHEDQSMIFEAITHVPSFLSLKDVGGDNLTVQninsrsdqfepeesetlFLIEMRKAGELLY
MTFFFHYLTRNNRFSKRRKSLKSAAAQNSSSSGRDDEQQQLAAYHYSTIIDLPSHILIDILSRLPLKSIFISRCVCKTWHILISDPLFATLHFDRNSGSNPELYLRTDFSTCISRTLHWVDLESFPGYNHAQCQWAKINAQFYLPKRYPKPNPKACTsngnsnrgnrragrEYDIVNSCNGFLCLRKPFHRNPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYSLGGAAWRKVGNAPWSPIAGLFPTYLNGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVIPAPPHFAEKPKTRDNLYDMNLGVLGGCLSICDVTYFAPPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDDGSLLLFCKRRALVLYNPVEKNTRYLLIHEDQSMIFEAITHVPSFLSLKDVGGDNLTVQNINSRSDQFEPEESETLFLIEMRKAGELLY
****************************************LAAYHYSTIIDLPSHILIDILSRLPLKSIFISRCVCKTWHILISDPLFATLHFDRNSGSNPELYLRTDFSTCISRTLHWVDLESFPGYNHAQCQWAKINAQFYLPKR************************EYDIVNSCNGFLCLRKPFHRNPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYSLGGAAWRKVGNAPWSPIAGLFPTYLNGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVIPAPPHFAEKPKTRDNLYDMNLGVLGGCLSICDVTYFAPPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDDGSLLLFCKRRALVLYNPVEKNTRYLLIHEDQSMIFEAITHVPSFLSLKDVGGDNLTV*******************************
MTFFFHY********************************************LPSHILIDILSRLPLKSIFISRCVCKTWHILISDPLFATLHFDRNSGSNPELYLRTDFSTCISRTLHWVDLESFPGYNHAQCQWAKINAQFYLPKRYPKPNPKACTSNGNSNRGNRRAGREYDIVNSCNGFLCLRKPFHRNPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYSLGGAAWRKVGNAPWSPIAGLFPTYLNGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVIPAPPHFAEKPKTRDNLYDMNLGVLGGCLSICDVTYFAPPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDDGSLLLFCKRRALVLYNPVEKNTRYLLIHEDQSMIFEAITHVPSFLSLKDV*****************************MRK*GELLY
MTFFFHYLTRNNRF************************QQLAAYHYSTIIDLPSHILIDILSRLPLKSIFISRCVCKTWHILISDPLFATLHFDRNSGSNPELYLRTDFSTCISRTLHWVDLESFPGYNHAQCQWAKINAQFYLPKRYPKPNPKACTSNGNSNRGNRRAGREYDIVNSCNGFLCLRKPFHRNPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYSLGGAAWRKVGNAPWSPIAGLFPTYLNGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVIPAPPHFAEKPKTRDNLYDMNLGVLGGCLSICDVTYFAPPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDDGSLLLFCKRRALVLYNPVEKNTRYLLIHEDQSMIFEAITHVPSFLSLKDVGGDNLTVQNINSRSDQFEPEESETLFLIEMRKAGELLY
MTFFFHYLTRNNRF*********************************TIIDLPSHILIDILSRLPLKSIFISRCVCKTWHILISDPLFATLHFDRNSGSNPELYLRTDFSTCISRTLHWVDLESFPGYNHAQCQWAKINAQFYLPKRYPKPNPKACTSNGNSNRGNRRAGREYDIVNSCNGFLCLRKPFHRNPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYSLGGAAWRKVGNAPWSPIAGLFPTYLNGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVIPAPPHFAEKPKTRDNLYDMNLGVLGGCLSICDVTYFAPPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDDGSLLLFCKRRALVLYNPVEKNTRYLLIHEDQSMIFEAITHVPSFLSLKDVGGDNLTVQNINSRSDQFEPEESETLFLIEMRKAG*LLY
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MTFFFHYLTRNNRFSKRRKSLKSAAAQNSSSSGRDDEQQQLAAYHYSTIIDLPSHILIDILSRLPLKSIFISRCVCKTWHILISDPLFATLHFDRNSGSNPELYLRTDFSTCISRTLHWVDLESFPGYNHAQCQWAKINAQFYLPKRYPKPNPKACTSNGNSNRGNRRAGREYDIVNSCNGFLCLRKPFHRNPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYSLGGAAWRKVGNAPWSPIAGLFPTYLNGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVIPAPPHFAEKPKTRDNLYDMNLGVLGGCLSICDVTYFAPPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDDGSLLLFCKRRALVLYNPVEKNTRYLLIHEDQSMIFEAITHVPSFLSLKDVGGDNLTVQNINSRSDQFEPEESETLFLIEMRKAGELLY
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query476 2.2.26 [Sep-21-2011]
Q9SFC7417 F-box protein At3g07870 O yes no 0.661 0.755 0.272 1e-24
Q8GXC7427 F-box/kelch-repeat protei no no 0.768 0.857 0.277 9e-23
Q9LIR8364 F-box/kelch-repeat protei no no 0.655 0.857 0.263 1e-16
Q9SU30413 F-box protein CPR30 OS=Ar no no 0.777 0.895 0.241 1e-12
Q3ECH0454 F-box protein At1g67130 O no no 0.466 0.488 0.275 4e-12
Q9LFW0438 Putative F-box protein At no no 0.626 0.680 0.232 1e-11
Q9LJC0367 Putative F-box protein At no no 0.485 0.629 0.262 7e-10
Q9FIH4395 Putative F-box protein At no no 0.554 0.668 0.254 7e-10
Q0WQM8444 F-box protein At1g53790 O no no 0.5 0.536 0.257 8e-10
Q9LTF6351 Putative F-box protein At no no 0.531 0.720 0.243 8e-10
>sp|Q9SFC7|FB135_ARATH F-box protein At3g07870 OS=Arabidopsis thaliana GN=At3g07870 PE=2 SV=1 Back     alignment and function desciption
 Score =  115 bits (287), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 113/415 (27%), Positives = 174/415 (41%), Gaps = 100/415 (24%)

Query: 52  LPSHILIDILSRLPLKSIFISRCVCKTWHILISDPLFATLHFDRNSGSNPELYLRTDFST 111
           LP  I+ DI SRLP+ SI     VC++W  +++      L    +S + P L L  D  +
Sbjct: 28  LPEDIIADIFSRLPISSIARLMFVCRSWRSVLTQ--HGRLSSSSSSPTKPCLLLHCD--S 83

Query: 112 CISRTLHWVDLESFPGYNHAQCQWAKINAQFYLPKRYPKPNPKACTSNGNSNRGNRRAGR 171
            I   LH++DL           +  +I  + +   R+    P                  
Sbjct: 84  PIRNGLHFLDLSE---------EEKRIKTKKF-TLRFASSMP------------------ 115

Query: 172 EYDIVNSCNGFLCLRKPFHRNPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFR 231
           E+D+V SCNG LCL    + +   + NP T   + +P+ +   +K   + ++ GFG+   
Sbjct: 116 EFDVVGSCNGLLCLSDSLYNDSLYLYNPFTTNSLELPECS---NKYHDQELVFGFGFHEM 172

Query: 232 SKQYKVLRLVF-----------------DDFLNRTAEIYSLGGA------AWRKVGNAPW 268
           +K+YKVL++V+                   +     +I +L         +WR +G AP+
Sbjct: 173 TKEYKVLKIVYFRGSSSNNNGIYRGRGRIQYKQSEVQILTLSSKTTDQSLSWRSLGKAPY 232

Query: 269 SPIAGLFPTYLNGVIHWVCD---DIEDDQSCSDCIVGFDFEDERFCVIPAPPHFAEKPKT 325
             +       +NG +H+V      + D +      V FD EDE F  IP P         
Sbjct: 233 KFVKRSSEALVNGRLHFVTRPRRHVPDRK-----FVSFDLEDEEFKEIPKPDCGGL---- 283

Query: 326 RDNLYDMNLGVLGGCLSICDVTY--FAPPDIWVMKDYGVQESWIKQLSV----------- 372
             N  +  L  L GCL  C V Y  +   DIWVMK YGV+ESW K+ S+           
Sbjct: 284 --NRTNHRLVNLKGCL--CAVVYGNYGKLDIWVMKTYGVKESWGKEYSIGTYLPKGLKQN 339

Query: 373 -----------DNGYFGICRPIKYLDDGSLLLFCKRRALVLYNPVEKNTRYLLIH 416
                      +NG   + R +  L++G +LL  K R LV Y+P     + LL H
Sbjct: 340 LDRPMWIWKNAENG--KVVRVLCLLENGEILLEYKSRVLVAYDPKLGKFKDLLFH 392

Arabidopsis thaliana (taxid: 3702)
>sp|Q8GXC7|FBK50_ARATH F-box/kelch-repeat protein At3g06240 OS=Arabidopsis thaliana GN=At3g06240 PE=2 SV=1 Back     alignment and function description
>sp|Q9LIR8|FBK67_ARATH F-box/kelch-repeat protein At3g23880 OS=Arabidopsis thaliana GN=At3g23880 PE=2 SV=1 Back     alignment and function description
>sp|Q9SU30|CPR30_ARATH F-box protein CPR30 OS=Arabidopsis thaliana GN=CPR30 PE=1 SV=2 Back     alignment and function description
>sp|Q3ECH0|FB75_ARATH F-box protein At1g67130 OS=Arabidopsis thaliana GN=At1g67130 PE=2 SV=3 Back     alignment and function description
>sp|Q9LFW0|FB257_ARATH Putative F-box protein At5g15660 OS=Arabidopsis thaliana GN=At5g15660 PE=4 SV=1 Back     alignment and function description
>sp|Q9LJC0|FB170_ARATH Putative F-box protein At3g21120 OS=Arabidopsis thaliana GN=At3g21120 PE=4 SV=1 Back     alignment and function description
>sp|Q9FIH4|FB280_ARATH Putative F-box protein At5g42430 OS=Arabidopsis thaliana GN=At5g42430 PE=4 SV=1 Back     alignment and function description
>sp|Q0WQM8|FB58_ARATH F-box protein At1g53790 OS=Arabidopsis thaliana GN=At1g53790 PE=2 SV=1 Back     alignment and function description
>sp|Q9LTF6|FB291_ARATH Putative F-box protein At5g52610 OS=Arabidopsis thaliana GN=At5g52610 PE=4 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query476
357483765 1154 F-box family protein [Medicago truncatul 0.884 0.364 0.334 4e-57
224118014435 predicted protein [Populus trichocarpa] 0.760 0.832 0.371 4e-56
357483733507 F-box family protein [Medicago truncatul 0.867 0.814 0.331 4e-55
388503998479 unknown [Medicago truncatula] 0.888 0.883 0.326 2e-54
357483915476 F-box protein [Medicago truncatula] gi|3 0.840 0.840 0.338 2e-53
357483729480 F-box [Medicago truncatula] gi|355513486 0.857 0.85 0.325 6e-53
388499430489 unknown [Lotus japonicus] 0.922 0.897 0.317 7e-53
357484725441 F-box family protein [Medicago truncatul 0.855 0.922 0.314 2e-50
357484717441 F-box family protein [Medicago truncatul 0.867 0.936 0.307 7e-50
224138404477 predicted protein [Populus trichocarpa] 0.800 0.798 0.346 7e-49
>gi|357483765|ref|XP_003612169.1| F-box family protein [Medicago truncatula] gi|355513504|gb|AES95127.1| F-box family protein [Medicago truncatula] Back     alignment and taxonomy information
 Score =  228 bits (582), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 165/494 (33%), Positives = 248/494 (50%), Gaps = 73/494 (14%)

Query: 10  RNNRFSKRRKSLKSAAAQNSSSSGRDDEQQQLAAYHYSTIIDLPSHILIDILSRLPLKSI 69
           +N   +  R SL+    +++ + GR DE        Y    +LPSHI+  +L  LP+KS+
Sbjct: 19  KNGSITPARASLR----RSNKAKGRVDEL-------YPYFDNLPSHIIAHMLLHLPIKSL 67

Query: 70  FISRCVCKTWHILISDPLFATLHFDRNSGSNPELYLRTDFSTCISRTLHWV--DLESFPG 127
            I  CVCK W  LIS+P FA L+F+R   S   L +R D    +SRT++ +  D E F  
Sbjct: 68  LICECVCKIWKTLISEPHFAKLNFER---SQVCLMIRIDDCRLVSRTMYLLECDPEKFQI 124

Query: 128 YNHAQCQWAKINAQFYLPKRYPKPNPKACTSNGNSNRGN---------RRAGREYDIVNS 178
            ++++ + A I   F LP R           N NS +           R    ++ +VNS
Sbjct: 125 GSNSRVKLAPI---FKLPLR-----------NANSYKEKIENKPKCPIRPYYDKFGVVNS 170

Query: 179 CNGFLCLRKPFHRNPCIICNPITGEYVTIPKPAA---EDDKKTLRTVISGFGYSFRSKQY 235
           CNG LCLR PF   P +ICNP+TGE++ +PK  A    +D     + I+ FG+  ++ +Y
Sbjct: 171 CNGLLCLRHPFEGRPLVICNPVTGEFIRLPKATANLIHNDIVDKVSGIAAFGFQPKTNEY 230

Query: 236 KVLRLVFDDFLNR---------TAEIYSLGGAAWRKVGNAPWSPI-AGL---FPTYLNGV 282
           KV+  ++D ++ R           EI +LG  +WR     P   I +GL   +PTY+NG 
Sbjct: 231 KVM-YIWDKYVRRGNGWVFDHIVLEINTLGTPSWRNAEVDPQISIGSGLSLHYPTYVNGA 289

Query: 283 IHWVCDDIEDDQSCSDCIVGFDFEDERFCVIPAPPHFAEKPKTRDNLYDMNLGVLGGCLS 342
           +HW+    ED++     I+ F FE ER    P+PP F  +         + +G L G L 
Sbjct: 290 LHWI--RFEDEER---SILCFCFESERLQSFPSPPVFQNQNNGFRRNERIRMGELRGLLY 344

Query: 343 ICDVTYFAPPDIWVMKDYGVQESWIKQLSV----------DNGYFGICRPIKYLDDG-SL 391
           ICD   F    +WVM +Y + ESW K  ++          D+  +G+C P+K  ++G ++
Sbjct: 345 ICDTYSFRDVAMWVMNEYDIGESWTKVYNIDTLISPLGRPDSQRYGLCWPVKNFEEGAAI 404

Query: 392 LLFCKRRALVLYNPVEKNTRYLLIHEDQSMIFEAITHVPSFLSLKD-VGGDNLTVQNINS 450
           LL+     L+ Y P +   +   IH   S   E I HVPS +SLKD V GDN  + NI+S
Sbjct: 405 LLYHSCNCLIYYEPKKHAFKVFRIHGISSEFVEIIPHVPSLISLKDVVKGDNTEMLNIHS 464

Query: 451 RSDQFEPEESETLF 464
           R    E  + E ++
Sbjct: 465 RCPDGEEFDDEPVY 478

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224118014|ref|XP_002331536.1| predicted protein [Populus trichocarpa] gi|222873760|gb|EEF10891.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|357483733|ref|XP_003612153.1| F-box family protein [Medicago truncatula] gi|355513488|gb|AES95111.1| F-box family protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|388503998|gb|AFK40065.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|357483915|ref|XP_003612244.1| F-box protein [Medicago truncatula] gi|355513579|gb|AES95202.1| F-box protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|357483729|ref|XP_003612151.1| F-box [Medicago truncatula] gi|355513486|gb|AES95109.1| F-box [Medicago truncatula] Back     alignment and taxonomy information
>gi|388499430|gb|AFK37781.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|357484725|ref|XP_003612650.1| F-box family protein [Medicago truncatula] gi|355513985|gb|AES95608.1| F-box family protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|357484717|ref|XP_003612646.1| F-box family protein [Medicago truncatula] gi|355513981|gb|AES95604.1| F-box family protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|224138404|ref|XP_002326594.1| predicted protein [Populus trichocarpa] gi|222833916|gb|EEE72393.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query476
TAIR|locus:2082410427 AT3G06240 "AT3G06240" [Arabido 0.529 0.590 0.290 2.6e-24
TAIR|locus:2076196364 AT3G23880 "AT3G23880" [Arabido 0.451 0.590 0.276 1.8e-21
TAIR|locus:2077452417 AT3G07870 "AT3G07870" [Arabido 0.392 0.448 0.299 1.2e-20
TAIR|locus:2143186438 AT5G15660 "AT5G15660" [Arabido 0.338 0.367 0.276 1.4e-12
TAIR|locus:2135615413 CPR1 "AT4G12560" [Arabidopsis 0.514 0.593 0.286 5.4e-12
TAIR|locus:2083450370 AT3G20690 "AT3G20690" [Arabido 0.430 0.554 0.304 6.3e-12
TAIR|locus:2197021461 AT1G53790 [Arabidopsis thalian 0.510 0.527 0.25 8.1e-12
TAIR|locus:2152064392 AT5G65850 "AT5G65850" [Arabido 0.390 0.474 0.284 1.5e-11
TAIR|locus:2015756400 AT1G30920 "AT1G30920" [Arabido 0.455 0.542 0.259 8.1e-11
TAIR|locus:2088985386 AT3G17280 "AT3G17280" [Arabido 0.304 0.375 0.259 3.1e-10
TAIR|locus:2082410 AT3G06240 "AT3G06240" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 240 (89.5 bits), Expect = 2.6e-24, Sum P(2) = 2.6e-24
 Identities = 80/275 (29%), Positives = 132/275 (48%)

Query:   174 DIVNSCNGFLCLRKPFHRNPCIICNPITGEYVTIP---KP-AAEDDKKTLRTVISGFGYS 229
             +IV S NG +C+  P       + NP TG+   +P   +P + E ++   +T   GFG+ 
Sbjct:   164 EIVGSSNGLVCI-SP-GEGAVFLYNPTTGDSKRLPENFRPKSVEYERDNFQTY--GFGFD 219

Query:   230 FRSKQYKVLRLVF--DDFLNRTAEIYSLGGAAWRKVGNAPWSPIAGLFPT--YLNGVIHW 285
               +  YK+++LV   +D L+  A +YSL   +WR++ N  +    G + +  + NG IHW
Sbjct:   220 GLTDDYKLVKLVATSEDILD--ASVYSLKADSWRRICNLNYEHNDGSYTSGVHFNGAIHW 277

Query:   286 VCDDIEDDQSCSDCIVGFDFEDERFCVIPAPPHFAEKPKTRDNLYDMNLGVLGGCLSICD 345
             V  +   +Q     +V FD + E F  +P P   AE    R +  +  +G L G L + +
Sbjct:   278 VFTESRHNQRV---VVAFDIQTEEFREMPVPDE-AEDCSHRFS--NFVVGSLNGRLCVVN 331

Query:   346 VTYFAPPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDDGSLLLFCKRRALVLYN- 404
               Y    DIWVM +YG  +SW  ++ ++  Y  + +P+    +   +L      LVLYN 
Sbjct:   332 SCYDVHDDIWVMSEYGEAKSW-SRIRINLLYRSM-KPLCSTKNDEEVLLELDGDLVLYNF 389

Query:   405 PVEKNTRYLLIHEDQSMIFEAITHVPSFLSLKDVG 439
                 ++   +     S  FEA T+V S +S    G
Sbjct:   390 ETNASSNLGICGVKLSDGFEANTYVESLISPNSYG 424
GO:0003674 "molecular_function" evidence=ND
GO:0005634 "nucleus" evidence=ISM
GO:0008150 "biological_process" evidence=ND
TAIR|locus:2076196 AT3G23880 "AT3G23880" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2077452 AT3G07870 "AT3G07870" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2143186 AT5G15660 "AT5G15660" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2135615 CPR1 "AT4G12560" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2083450 AT3G20690 "AT3G20690" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2197021 AT1G53790 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2152064 AT5G65850 "AT5G65850" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2015756 AT1G30920 "AT1G30920" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2088985 AT3G17280 "AT3G17280" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query476
TIGR01640230 TIGR01640, F_box_assoc_1, F-box protein interactio 5e-30
pfam0064648 pfam00646, F-box, F-box domain 3e-08
pfam1293747 pfam12937, F-box-like, F-box-like 5e-08
smart0025641 smart00256, FBOX, A Receptor for Ubiquitination Ta 1e-07
pfam07734159 pfam07734, FBA_1, F-box associated 6e-05
>gnl|CDD|233502 TIGR01640, F_box_assoc_1, F-box protein interaction domain Back     alignment and domain information 
 Score =  116 bits (292), Expect = 5e-30
 Identities = 59/242 (24%), Positives = 93/242 (38%), Gaps = 25/242 (10%)

Query: 178 SCNGFLCLRKPFHRNPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKV 237
            C+G +C          ++ NP TG+   +P P +    K   T     GY    KQYKV
Sbjct: 3   PCDGLICFSY---GKRLVVWNPSTGQSRWLPTPKSRRSNKESDTY--FLGYDPIEKQYKV 57

Query: 238 LRLVFDDFLNRTA---EIYSLGGAAWRKVGNAPWSPIAGLFPTYLNGVIHWVCDDIEDDQ 294
           L    D   NR     ++Y+LG  +WR +  +P           +NGV++++   ++ + 
Sbjct: 58  LCF-SDRSGNRNQSEHQVYTLGSNSWRTIECSPPHHPLKSRGVCINGVLYYLAYTLKTNP 116

Query: 295 SCSDCIVGFDFEDERFCVIPAPPHFAEKPKTRDNLYDMNLGVLGGCLSICDVTYFAPP-D 353
                IV FD   ERF     P          D++  ++L    G L++          D
Sbjct: 117 --DYFIVSFDVSSERF-KEFIPLPC----GNSDSVDYLSLINYKGKLAVLKQKKDTNNFD 169

Query: 354 IWVMKDYGVQESWIKQLSVDNGYFGICR----PIKYLDDGSLLL---FCKRRALVLYNPV 406
           +WV+ D G QE W K  +V                + D G ++L         +  YN  
Sbjct: 170 LWVLNDAGKQE-WSKLFTVPIPPLPDLVDDNFLSGFTDKGEIVLCCEDENPFYIFYYNVG 228

Query: 407 EK 408
           E 
Sbjct: 229 EN 230

This model describes a large family of plant domains, with several hundred members in Arabidopsis thaliana. Most examples are found C-terminal to an F-box (pfam00646), a 60 amino acid motif involved in ubiquitination of target proteins to mark them for degradation. Two-hybid experiments support the idea that most members are interchangeable F-box subunits of SCF E3 complexes. Some members have two copies of this domain. Length = 230
>gnl|CDD|201368 pfam00646, F-box, F-box domain Back     alignment and domain information
>gnl|CDD|221867 pfam12937, F-box-like, F-box-like Back     alignment and domain information
>gnl|CDD|197608 smart00256, FBOX, A Receptor for Ubiquitination Targets Back     alignment and domain information
>gnl|CDD|219544 pfam07734, FBA_1, F-box associated Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 476
TIGR01640230 F_box_assoc_1 F-box protein interaction domain. Th 100.0
PF07734164 FBA_1: F-box associated; InterPro: IPR006527 This 99.73
PF08268129 FBA_3: F-box associated domain; InterPro: IPR01318 99.62
PLN03215373 ascorbic acid mannose pathway regulator 1; Provisi 99.38
PF1293747 F-box-like: F-box-like; PDB: 1P22_A 2OVP_B 2OVR_B 98.79
PHA02713557 hypothetical protein; Provisional 98.75
PF0064648 F-box: F-box domain; InterPro: IPR001810 The F-box 98.64
PLN02193470 nitrile-specifier protein 98.56
KOG4441571 consensus Proteins containing BTB/POZ and Kelch do 98.54
smart0025641 FBOX A Receptor for Ubiquitination Targets. 98.52
PHA03098534 kelch-like protein; Provisional 98.51
PLN02153341 epithiospecifier protein 98.51
PHA02713557 hypothetical protein; Provisional 98.44
KOG4441571 consensus Proteins containing BTB/POZ and Kelch do 98.39
TIGR03547346 muta_rot_YjhT mutatrotase, YjhT family. Members of 98.36
PHA02790480 Kelch-like protein; Provisional 98.27
PRK14131376 N-acetylneuraminic acid mutarotase; Provisional 98.15
TIGR03548323 mutarot_permut cyclically-permuted mutatrotase fam 98.11
PLN02153341 epithiospecifier protein 98.07
PHA02790480 Kelch-like protein; Provisional 97.99
PHA03098534 kelch-like protein; Provisional 97.87
PLN02193470 nitrile-specifier protein 97.8
TIGR03548323 mutarot_permut cyclically-permuted mutatrotase fam 97.74
PRK14131376 N-acetylneuraminic acid mutarotase; Provisional 97.66
TIGR03547346 muta_rot_YjhT mutatrotase, YjhT family. Members of 97.5
KOG0281499 consensus Beta-TrCP (transducin repeats containing 97.34
KOG4693392 consensus Uncharacterized conserved protein, conta 97.29
KOG2120419 consensus SCF ubiquitin ligase, Skp2 component [Po 97.21
KOG4693392 consensus Uncharacterized conserved protein, conta 97.03
KOG1230 521 consensus Protein containing repeated kelch motifs 96.63
KOG0379482 consensus Kelch repeat-containing proteins [Genera 96.36
KOG0379 482 consensus Kelch repeat-containing proteins [Genera 95.29
KOG2997366 consensus F-box protein FBX9 [General function pre 94.95
KOG1230 521 consensus Protein containing repeated kelch motifs 91.58
PF1396450 Kelch_6: Kelch motif 91.08
COG4257353 Vgb Streptogramin lyase [Defense mechanisms] 90.69
PF02191250 OLF: Olfactomedin-like domain; InterPro: IPR003112 90.53
PF07762131 DUF1618: Protein of unknown function (DUF1618); In 90.25
PF13360238 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 89.97
PF1396450 Kelch_6: Kelch motif 87.9
PF07893342 DUF1668: Protein of unknown function (DUF1668); In 87.78
PF0134447 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is 86.52
PF08450246 SGL: SMP-30/Gluconolaconase/LRE-like region; Inter 85.87
KOG4341483 consensus F-box protein containing LRR [General fu 85.58
PF0764649 Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is 84.45
>TIGR01640 F_box_assoc_1 F-box protein interaction domain Back     alignment and domain information 
Probab=100.00  E-value=5.8e-34  Score=268.30  Aligned_cols=219  Identities=25%  Similarity=0.411  Sum_probs=163.8

Q ss_pred             EecccceEEEeecCCCccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcC--ccccEEEEE
Q 011826          176 VNSCNGFLCLRKPFHRNPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDD--FLNRTAEIY  253 (476)
Q Consensus       176 ~~s~~GLlcl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~--~~~~~~eVy  253 (476)
                      +++||||||+...   ..++||||+||+++.||+++.. .... ....++||||+.+++||||++....  .....++||
T Consensus         1 ~~sCnGLlc~~~~---~~~~V~NP~T~~~~~LP~~~~~-~~~~-~~~~~~~G~d~~~~~YKVv~~~~~~~~~~~~~~~Vy   75 (230)
T TIGR01640         1 VVPCDGLICFSYG---KRLVVWNPSTGQSRWLPTPKSR-RSNK-ESDTYFLGYDPIEKQYKVLCFSDRSGNRNQSEHQVY   75 (230)
T ss_pred             CcccceEEEEecC---CcEEEECCCCCCEEecCCCCCc-cccc-ccceEEEeecccCCcEEEEEEEeecCCCCCccEEEE
Confidence            4799999999864   4699999999999999976531 1111 1126899999999999999996641  235689999


Q ss_pred             EeCCCceEEccCCCCCCccCccceEEcceEEEEEeeccCCCCCcceEEEEECCCceEE-EEcCCCCCCCCCCccCCccee
Q 011826          254 SLGGAAWRKVGNAPWSPIAGLFPTYLNGVIHWVCDDIEDDQSCSDCIVGFDFEDERFC-VIPAPPHFAEKPKTRDNLYDM  332 (476)
Q Consensus       254 ss~t~~Wr~~~~~p~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~-~i~lP~~~~~~~~~~~~~~~~  332 (476)
                      ++++++||.+...+........+|++||++||++.....  .....|++||+.+|+|+ .+++|......      ....
T Consensus        76 s~~~~~Wr~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~--~~~~~IvsFDl~~E~f~~~i~~P~~~~~~------~~~~  147 (230)
T TIGR01640        76 TLGSNSWRTIECSPPHHPLKSRGVCINGVLYYLAYTLKT--NPDYFIVSFDVSSERFKEFIPLPCGNSDS------VDYL  147 (230)
T ss_pred             EeCCCCccccccCCCCccccCCeEEECCEEEEEEEECCC--CCcEEEEEEEcccceEeeeeecCcccccc------ccce
Confidence            999999999985432222222599999999999976211  11127999999999999 59999764321      1146


Q ss_pred             eEEeeCCeEEEEecCC-CCCeEEEeeccCCCCcceEEEEEEeCCCc----ceeeEEEEecCCcEEEEecC---CEEEEEe
Q 011826          333 NLGVLGGCLSICDVTY-FAPPDIWVMKDYGVQESWIKQLSVDNGYF----GICRPIKYLDDGSLLLFCKR---RALVLYN  404 (476)
Q Consensus       333 ~L~~~~G~L~~~~~~~-~~~l~IWvl~~~~~~~~W~~~~~I~~~~~----~~~~p~~~~~~g~il~~~~~---~~l~~yd  404 (476)
                      .|++++|+||++.... ...++||+|++++. ..|+|.++|+....    ....|+++.++|+|++...+   ..++.||
T Consensus       148 ~L~~~~G~L~~v~~~~~~~~~~IWvl~d~~~-~~W~k~~~i~~~~~~~~~~~~~~~~~~~~g~I~~~~~~~~~~~~~~y~  226 (230)
T TIGR01640       148 SLINYKGKLAVLKQKKDTNNFDLWVLNDAGK-QEWSKLFTVPIPPLPDLVDDNFLSGFTDKGEIVLCCEDENPFYIFYYN  226 (230)
T ss_pred             EEEEECCEEEEEEecCCCCcEEEEEECCCCC-CceeEEEEEcCcchhhhhhheeEeEEeeCCEEEEEeCCCCceEEEEEe
Confidence            7999999999987643 25699999999974 56999999985211    11358889999999998764   3499999


Q ss_pred             CCCC
Q 011826          405 PVEK  408 (476)
Q Consensus       405 l~t~  408 (476)
                      ++++
T Consensus       227 ~~~~  230 (230)
T TIGR01640       227 VGEN  230 (230)
T ss_pred             ccCC
Confidence            9875

This model describes a large family of plant domains, with several hundred members in Arabidopsis thaliana. Most examples are found C-terminal to an F-box (pfam00646), a 60 amino acid motif involved in ubiquitination of target proteins to mark them for degradation. Two-hybid experiments support the idea that most members are interchangeable F-box subunits of SCF E3 complexes. Some members have two copies of this domain.
>PF07734 FBA_1: F-box associated; InterPro: IPR006527 This domain occurs in a diverse superfamily of genes in plants Back     alignment and domain information
>PF08268 FBA_3: F-box associated domain; InterPro: IPR013187 This domain occurs in a diverse superfamily of genes in plants Back     alignment and domain information
>PLN03215 ascorbic acid mannose pathway regulator 1; Provisional Back     alignment and domain information
>PF12937 F-box-like: F-box-like; PDB: 1P22_A 2OVP_B 2OVR_B 2OVQ_B 1FS1_A 1FS2_C 1FQV_I 1LDK_E 2AST_B 2ASS_B Back     alignment and domain information
>PHA02713 hypothetical protein; Provisional Back     alignment and domain information
>PF00646 F-box: F-box domain; InterPro: IPR001810 The F-box domain was first described as a sequence motif found in cyclin-F that interacts with the protein SKP1 [, ] Back     alignment and domain information
>PLN02193 nitrile-specifier protein Back     alignment and domain information
>KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only] Back     alignment and domain information
>smart00256 FBOX A Receptor for Ubiquitination Targets Back     alignment and domain information
>PHA03098 kelch-like protein; Provisional Back     alignment and domain information
>PLN02153 epithiospecifier protein Back     alignment and domain information
>PHA02713 hypothetical protein; Provisional Back     alignment and domain information
>KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only] Back     alignment and domain information
>TIGR03547 muta_rot_YjhT mutatrotase, YjhT family Back     alignment and domain information
>PHA02790 Kelch-like protein; Provisional Back     alignment and domain information
>PRK14131 N-acetylneuraminic acid mutarotase; Provisional Back     alignment and domain information
>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein Back     alignment and domain information
>PLN02153 epithiospecifier protein Back     alignment and domain information
>PHA02790 Kelch-like protein; Provisional Back     alignment and domain information
>PHA03098 kelch-like protein; Provisional Back     alignment and domain information
>PLN02193 nitrile-specifier protein Back     alignment and domain information
>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein Back     alignment and domain information
>PRK14131 N-acetylneuraminic acid mutarotase; Provisional Back     alignment and domain information
>TIGR03547 muta_rot_YjhT mutatrotase, YjhT family Back     alignment and domain information
>KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown] Back     alignment and domain information
>KOG4693 consensus Uncharacterized conserved protein, contains kelch repeat [General function prediction only] Back     alignment and domain information
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG4693 consensus Uncharacterized conserved protein, contains kelch repeat [General function prediction only] Back     alignment and domain information
>KOG1230 consensus Protein containing repeated kelch motifs [General function prediction only] Back     alignment and domain information
>KOG0379 consensus Kelch repeat-containing proteins [General function prediction only] Back     alignment and domain information
>KOG0379 consensus Kelch repeat-containing proteins [General function prediction only] Back     alignment and domain information
>KOG2997 consensus F-box protein FBX9 [General function prediction only] Back     alignment and domain information
>KOG1230 consensus Protein containing repeated kelch motifs [General function prediction only] Back     alignment and domain information
>PF13964 Kelch_6: Kelch motif Back     alignment and domain information
>COG4257 Vgb Streptogramin lyase [Defense mechanisms] Back     alignment and domain information
>PF02191 OLF: Olfactomedin-like domain; InterPro: IPR003112 The olfactomedin-domain was first identified in olfactomedin, an extracellular matrix protein of the olfactory neuroepithelium [] Back     alignment and domain information
>PF07762 DUF1618: Protein of unknown function (DUF1618); InterPro: IPR011676 The proteins of this entry are mainly hypothetical proteins expressed by Oryza sativa Back     alignment and domain information
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A Back     alignment and domain information
>PF13964 Kelch_6: Kelch motif Back     alignment and domain information
>PF07893 DUF1668: Protein of unknown function (DUF1668); InterPro: IPR012871 The hypothetical proteins found in this family are expressed by Oryza sativa (Rice) and are of unknown function Back     alignment and domain information
>PF01344 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] Back     alignment and domain information
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species Back     alignment and domain information
>KOG4341 consensus F-box protein containing LRR [General function prediction only] Back     alignment and domain information
>PF07646 Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query476
2e31_A297 FBS1, F-box only protein 2; ubiquitin, SCF, ubiqui 1e-07
1fs1_A53 SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, L 2e-07
3l2o_B312 F-box only protein 4; small G protein fold, UBL co 7e-06
2ast_B336 S-phase kinase-associated protein 2; SCF-substrate 1e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-05
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A Length = 297 Back     alignment and structure
 Score = 52.2 bits (124), Expect = 1e-07
 Identities = 15/83 (18%), Positives = 33/83 (39%), Gaps = 1/83 (1%)

Query: 15 SKRRKSLKSAAAQNSSSSGRDDEQQQLAAYHYSTIIDLPSHILIDILSRLPLKS-IFISR 73
          S   +  ++ A  ++      + +++  A     + +LP  +L+ +L+ LP    +   R
Sbjct: 17 SPEEQPEEAGAEASAEEEQLREAEEEEEAEAVEYLAELPEPLLLRVLAELPATELVQACR 76

Query: 74 CVCKTWHILISDPLFATLHFDRN 96
           VC  W  L+       L   + 
Sbjct: 77 LVCLRWKELVDGAPLWLLKCQQE 99
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E Length = 53 Back     alignment and structure
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens} Length = 312 Back     alignment and structure
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A Length = 336 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query476
2e31_A297 FBS1, F-box only protein 2; ubiquitin, SCF, ubiqui 99.03
1fs1_A53 SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, L 99.02
3ii7_A306 Kelch-like protein 7; protein-binding, kelch-repea 98.9
1zgk_A308 Kelch-like ECH-associated protein 1; beta-propelle 98.89
2xn4_A302 Kelch-like protein 2; structural protein, cytoskel 98.89
2vpj_A301 Kelch-like protein 12; adaptor protein, WNT signal 98.88
4asc_A315 Kelch repeat and BTB domain-containing protein 5; 98.85
2woz_A318 Kelch repeat and BTB domain-containing protein 10; 98.84
3ii7_A306 Kelch-like protein 7; protein-binding, kelch-repea 98.71
2vpj_A301 Kelch-like protein 12; adaptor protein, WNT signal 98.68
2uvk_A357 YJHT; unknown function, hypothetical protein, sial 98.62
2xn4_A302 Kelch-like protein 2; structural protein, cytoskel 98.61
1zgk_A308 Kelch-like ECH-associated protein 1; beta-propelle 98.61
2ovr_B445 FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 98.61
3v7d_B464 Cell division control protein 4; WD 40 domain, pho 98.47
4asc_A315 Kelch repeat and BTB domain-containing protein 5; 98.45
2uvk_A357 YJHT; unknown function, hypothetical protein, sial 98.41
1p22_A435 F-BOX/WD-repeat protein 1A; ubiquitination, degrad 98.34
2woz_A318 Kelch repeat and BTB domain-containing protein 10; 98.24
2zwa_A695 Leucine carboxyl methyltransferase 2; HET: SAH CIT 98.13
3l2o_B312 F-box only protein 4; small G protein fold, UBL co 97.79
1k3i_A656 Galactose oxidase precursor; blade beta propeller, 97.51
1k3i_A 656 Galactose oxidase precursor; blade beta propeller, 97.45
2ast_B336 S-phase kinase-associated protein 2; SCF-substrate 97.38
2zwa_A695 Leucine carboxyl methyltransferase 2; HET: SAH CIT 97.35
2p1m_B 594 Transport inhibitor response 1 protein; F-BOX, leu 96.82
2z2n_A299 Virginiamycin B lyase; seven-bladed beta-propeller 96.02
3ogk_B 592 Coronatine-insensitive protein 1; leucine rich rep 95.35
4gga_A420 P55CDC, cell division cycle protein 20 homolog; ce 91.51
1q7f_A286 NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL 87.44
2qc5_A300 Streptogramin B lactonase; beta propeller, lyase; 87.33
3dsm_A328 Uncharacterized protein bacuni_02894; seven_blated 86.88
3e5z_A296 Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco 86.39
1q7f_A286 NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL 86.35
1ri6_A343 Putative isomerase YBHE; 7-bladed propeller, enzym 86.22
1l0q_A391 Surface layer protein; SLP, S-layer, 7-bladed beta 86.12
3jrp_A379 Fusion protein of protein transport protein SEC13 85.47
3jro_A 753 Fusion protein of protein transport protein SEC13 84.83
3q7m_A376 Lipoprotein YFGL, BAMB; beta-propeller, BAM comple 84.37
3u4y_A331 Uncharacterized protein; structural genomics, PSI- 84.37
4e54_B435 DNA damage-binding protein 2; beta barrel, double 82.57
2z2n_A299 Virginiamycin B lyase; seven-bladed beta-propeller 82.47
2ojh_A297 Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 81.18
3dsm_A328 Uncharacterized protein bacuni_02894; seven_blated 80.73
3dwl_C377 Actin-related protein 2/3 complex subunit 1; prope 80.59
3q7m_A376 Lipoprotein YFGL, BAMB; beta-propeller, BAM comple 80.39
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A Back     alignment and structure
Probab=99.03  E-value=9e-11  Score=111.44  Aligned_cols=54  Identities=24%  Similarity=0.495  Sum_probs=49.0

Q ss_pred             hccCCCCCCCCHHHHHHHHhcCCccccc-eeeccchhhhhhhCChHHHHHHhhcC
Q 011826           43 AYHYSTIIDLPSHILIDILSRLPLKSIF-ISRCVCKTWHILISDPLFATLHFDRN   96 (476)
Q Consensus        43 ~~~~~~~~~LP~Dll~eIL~RLP~ksL~-R~r~VCK~W~~lissp~F~~~~~~~~   96 (476)
                      +|++..+..||+||+.+||+|||+++|+ ||++|||+|++|++++.|.+.++.+.
T Consensus        45 ~~~~~~~~~LP~ell~~Il~~Lp~~~L~~r~~~VCk~Wr~l~~~~~~w~~~~~~~   99 (297)
T 2e31_A           45 AEAVEYLAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPLWLLKCQQE   99 (297)
T ss_dssp             --CCCCTTSSCHHHHHHHHHTSCHHHHHHTGGGTCHHHHHHHTSHHHHHHHHHHT
T ss_pred             cccccChhhCCHHHHHHHHHcCCHHHHHHHHHHHhHHHHHHhcChHHHHHHhhcc
Confidence            3446688899999999999999999999 99999999999999999999998776
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E Back     alignment and structure
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} Back     alignment and structure
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A Back     alignment and structure
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} Back     alignment and structure
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} Back     alignment and structure
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} Back     alignment and structure
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} Back     alignment and structure
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} Back     alignment and structure
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} Back     alignment and structure
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} Back     alignment and structure
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} Back     alignment and structure
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A Back     alignment and structure
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* Back     alignment and structure
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* Back     alignment and structure
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} Back     alignment and structure
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} Back     alignment and structure
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 Back     alignment and structure
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} Back     alignment and structure
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* Back     alignment and structure
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens} Back     alignment and structure
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A Back     alignment and structure
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A Back     alignment and structure
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A Back     alignment and structure
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* Back     alignment and structure
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* Back     alignment and structure
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* Back     alignment and structure
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* Back     alignment and structure
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A Back     alignment and structure
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 Back     alignment and structure
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} Back     alignment and structure
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} Back     alignment and structure
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} Back     alignment and structure
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 Back     alignment and structure
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 Back     alignment and structure
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 Back     alignment and structure
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} Back     alignment and structure
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} Back     alignment and structure
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A Back     alignment and structure
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} Back     alignment and structure
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* Back     alignment and structure
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* Back     alignment and structure
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} Back     alignment and structure
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} Back     alignment and structure
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} Back     alignment and structure
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 476
d1fs1a141 a.158.1.1 (A:109-149) Skp2 {Human (Homo sapiens) [ 1e-08
d2ovrb1102 a.158.1.1 (B:2263-2364) F-box/WD repeat-containing 9e-07
d1p22a1118 a.158.1.1 (A:135-252) F-box/WD-repeat protein 1 (b 2e-05
d1nexb1100 a.158.1.1 (B:270-369) Cdc4 F-box and linker domain 7e-04
>d1fs1a1 a.158.1.1 (A:109-149) Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 41 Back     information, alignment and structure

class: All alpha proteins
fold: F-box domain
superfamily: F-box domain
family: F-box domain
domain: Skp2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.5 bits (116), Expect = 1e-08
 Identities = 14/38 (36%), Positives = 18/38 (47%)

Query: 51 DLPSHILIDILSRLPLKSIFISRCVCKTWHILISDPLF 88
           LP  +L+ I S L L  +     VCK W+ L SD   
Sbjct: 3  SLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESL 40
>d2ovrb1 a.158.1.1 (B:2263-2364) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 102 Back     information, alignment and structure
>d1p22a1 a.158.1.1 (A:135-252) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 118 Back     information, alignment and structure
>d1nexb1 a.158.1.1 (B:270-369) Cdc4 F-box and linker domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 100 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query476
d1fs1a141 Skp2 {Human (Homo sapiens) [TaxId: 9606]} 99.19
d2ovrb1102 F-box/WD repeat-containing protein 7, FBXW7 {Human 98.54
d1nexb1100 Cdc4 F-box and linker domains {Baker's yeast (Sacc 98.37
d1p22a1118 F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom 98.07
d1zgka1288 Kelch-like ECH-associated protein 1, KEAP1 {Human 98.05
d1zgka1288 Kelch-like ECH-associated protein 1, KEAP1 {Human 97.91
d1k3ia3387 Galactose oxidase, central domain {Fungi (Fusarium 97.27
d1k3ia3387 Galactose oxidase, central domain {Fungi (Fusarium 97.09
d2ghsa1295 Regucalcin {Agrobacterium tumefaciens [TaxId: 358] 86.47
d2dg1a1319 Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 84.38
>d1fs1a1 a.158.1.1 (A:109-149) Skp2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: All alpha proteins
fold: F-box domain
superfamily: F-box domain
family: F-box domain
domain: Skp2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.19  E-value=3.3e-12  Score=82.31  Aligned_cols=40  Identities=35%  Similarity=0.535  Sum_probs=37.7

Q ss_pred             CCCCCHHHHHHHHhcCCccccceeeccchhhhhhhCChHH
Q 011826           49 IIDLPSHILIDILSRLPLKSIFISRCVCKTWHILISDPLF   88 (476)
Q Consensus        49 ~~~LP~Dll~eIL~RLP~ksL~R~r~VCK~W~~lissp~F   88 (476)
                      |..||+|++.+||++||+++|+|+++|||+|+.+++++.+
T Consensus         1 f~~LP~eil~~If~~L~~~dl~~~~~Vcr~w~~l~~~~~l   40 (41)
T d1fs1a1           1 WDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESL   40 (41)
T ss_dssp             CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCGGG
T ss_pred             CCcCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCccc
Confidence            5689999999999999999999999999999999999864
>d2ovrb1 a.158.1.1 (B:2263-2364) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1nexb1 a.158.1.1 (B:270-369) Cdc4 F-box and linker domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1p22a1 a.158.1.1 (A:135-252) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} Back     information, alignment and structure
>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} Back     information, alignment and structure
>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} Back     information, alignment and structure
>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure