Citrus Sinensis ID: 011930
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 474 | ||||||
| 224134334 | 477 | predicted protein [Populus trichocarpa] | 0.997 | 0.991 | 0.776 | 0.0 | |
| 255561190 | 478 | conserved hypothetical protein [Ricinus | 0.993 | 0.985 | 0.775 | 0.0 | |
| 224094753 | 454 | predicted protein [Populus trichocarpa] | 0.951 | 0.993 | 0.784 | 0.0 | |
| 356496755 | 470 | PREDICTED: uncharacterized protein LOC10 | 0.978 | 0.987 | 0.737 | 0.0 | |
| 297735172 | 481 | unnamed protein product [Vitis vinifera] | 0.993 | 0.979 | 0.751 | 0.0 | |
| 225430784 | 476 | PREDICTED: uncharacterized protein LOC10 | 0.985 | 0.981 | 0.748 | 0.0 | |
| 217073872 | 474 | unknown [Medicago truncatula] | 0.932 | 0.932 | 0.730 | 1e-180 | |
| 356518101 | 491 | PREDICTED: uncharacterized protein LOC10 | 0.991 | 0.957 | 0.707 | 1e-179 | |
| 356509743 | 474 | PREDICTED: uncharacterized protein LOC10 | 0.991 | 0.991 | 0.710 | 1e-179 | |
| 357483379 | 470 | Membrane protein-like protein [Medicago | 0.972 | 0.980 | 0.743 | 1e-176 |
| >gi|224134334|ref|XP_002327812.1| predicted protein [Populus trichocarpa] gi|222836897|gb|EEE75290.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 695 bits (1794), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/478 (77%), Positives = 423/478 (88%), Gaps = 5/478 (1%)
Query: 1 MAQIRMNRRSLAA-AVAVWMVFLGLIMMEKLSNAERLLKDKDPQVFADEKETRPGFLCRV 59
MA+I++N+R+LA AV ++FL ++M +++AERLLKDK+P+ A EKE PG++ +V
Sbjct: 1 MAKIKLNQRALATTAVLTCLIFLVQVLMTNMASAERLLKDKEPEASA-EKEMSPGYIVKV 59
Query: 60 AHFLWQSGESSYEPVWP---FGWKVVVGSIVGFFGAALGSVGGVGGGGIFVPMLTLIIGF 116
HFL+Q G+SSYEPVWP F W++VVG+IVGF GAALGSVGGVGGGGIFVPMLTLIIGF
Sbjct: 60 LHFLFQGGKSSYEPVWPDMKFDWRIVVGTIVGFLGAALGSVGGVGGGGIFVPMLTLIIGF 119
Query: 117 DPKSATAISKCMIMGAAGSTVYYNLRLRHPTLDMPLIDYDLALLFQPMLMLGISIGVAFN 176
DPKS+TAISKCMIMGAAG+TVYYNLRLRHPTLDMPLIDYDL LLFQPMLMLGISIGV+F+
Sbjct: 120 DPKSSTAISKCMIMGAAGATVYYNLRLRHPTLDMPLIDYDLTLLFQPMLMLGISIGVSFS 179
Query: 177 VMFADWMVTVLLIILFIGTSTKALFKGIDTWKKETMMKKEAAKVLESESKAADVDGQDYK 236
VMFADWMVTVLLIILFIGTSTKALFKGIDTWKKETMM+K+AAK LESESK D +DYK
Sbjct: 180 VMFADWMVTVLLIILFIGTSTKALFKGIDTWKKETMMRKDAAKQLESESKPEDGAEEDYK 239
Query: 237 QLPSGPSTVHDEEVPIIKNIYWKELSLLLYVWLGFLAVQLAKEYVVPCSITYWILNALQV 296
LPSGP + D+EVP+ +NIYWKE++LL YVW GFL VQ+ + Y CS+TYWILN+LQV
Sbjct: 240 PLPSGPVVLPDDEVPLRENIYWKEVALLFYVWAGFLVVQIVQTYFPTCSVTYWILNSLQV 299
Query: 297 PIAVSVALFEAICLYKGTRVIASKGKEITNWKIHQIVFYCFCGIVAGMVGGLLGLGGGFI 356
PIA SV LFEAICL KGTRVIASKGKEITNWK+HQI+ YC CGI+AGMVGGLLGLGGGFI
Sbjct: 300 PIAASVTLFEAICLCKGTRVIASKGKEITNWKLHQILLYCSCGIIAGMVGGLLGLGGGFI 359
Query: 357 LGPLFLELGIPPQVASATSTFAMTFSSSMSVVQYYLLDRFPVPYAAFFTLVATFAAFAGQ 416
LGPLFLELGIPPQVASATSTFAM FSSSMSVV+YYLL+RFPVPYAA+F LVAT +AF GQ
Sbjct: 360 LGPLFLELGIPPQVASATSTFAMAFSSSMSVVEYYLLNRFPVPYAAYFALVATISAFVGQ 419
Query: 417 HVVRKIIAVLGRASIIVFILALTIFVSAISLGGFGIENMVKKLKNQEYMGFENLCQIS 474
HVVRKIIA LGRAS+I+FILALTIFVSA+SLGG GI NMV+KL+N+EYMGFENLCQ S
Sbjct: 420 HVVRKIIAFLGRASLIIFILALTIFVSAVSLGGVGIANMVEKLENEEYMGFENLCQQS 477
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255561190|ref|XP_002521607.1| conserved hypothetical protein [Ricinus communis] gi|223539285|gb|EEF40878.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|224094753|ref|XP_002310222.1| predicted protein [Populus trichocarpa] gi|222853125|gb|EEE90672.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|356496755|ref|XP_003517231.1| PREDICTED: uncharacterized protein LOC100801441 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|297735172|emb|CBI17534.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|225430784|ref|XP_002267318.1| PREDICTED: uncharacterized protein LOC100253061 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|217073872|gb|ACJ85296.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|356518101|ref|XP_003527721.1| PREDICTED: uncharacterized protein LOC100789748 [Glycine max] gi|83853827|gb|ABC47859.1| membrane protein-like protein [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|356509743|ref|XP_003523605.1| PREDICTED: uncharacterized protein LOC100816633 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|357483379|ref|XP_003611976.1| Membrane protein-like protein [Medicago truncatula] gi|358344383|ref|XP_003636269.1| Membrane protein-like protein [Medicago truncatula] gi|355502204|gb|AES83407.1| Membrane protein-like protein [Medicago truncatula] gi|355513311|gb|AES94934.1| Membrane protein-like protein [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 474 | ||||||
| TAIR|locus:504956017 | 476 | AT2G25737 [Arabidopsis thalian | 0.978 | 0.974 | 0.463 | 3.9e-108 | |
| TAIR|locus:2040605 | 459 | AT2G36630 [Arabidopsis thalian | 0.858 | 0.886 | 0.370 | 9.9e-71 | |
| TAIR|locus:2200061 | 367 | AT1G11540 "AT1G11540" [Arabido | 0.736 | 0.950 | 0.260 | 3.5e-27 | |
| TAIR|locus:2195773 | 458 | AT1G61740 [Arabidopsis thalian | 0.405 | 0.419 | 0.293 | 4.4e-24 | |
| TAIR|locus:2127343 | 449 | AT4G21250 "AT4G21250" [Arabido | 0.736 | 0.777 | 0.242 | 3.4e-20 | |
| TAIR|locus:2127348 | 393 | AT4G21260 "AT4G21260" [Arabido | 0.177 | 0.213 | 0.382 | 4.4e-14 | |
| DICTYBASE|DDB_G0269644 | 549 | DDB_G0269644 [Dictyostelium di | 0.206 | 0.178 | 0.377 | 4.9e-14 |
| TAIR|locus:504956017 AT2G25737 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1069 (381.4 bits), Expect = 3.9e-108, P = 3.9e-108
Identities = 223/481 (46%), Positives = 293/481 (60%)
Query: 1 MAQIRMNRRSLAAAVAVWMVFLGLIMMEKLSNAERLLKDKDPQVFADE-KETRPGFLCRV 59
M ++R L + V ++++ L +AER + K ++ DE +E F +
Sbjct: 1 MTKLRSKWLGLRS-VTIFLINFSLAFA--FVSAER--RGKSLRLSTDETRENESSFFLKA 55
Query: 60 AHFLWQSGESSYEPVWP---FGWKVVVGSIXXXXXXXXXXXXXXXXXXXXXPMLTLIIGF 116
+FLW+S + Y VWP F W++V+G++ PML+LIIGF
Sbjct: 56 INFLWESDQIGYRHVWPEFEFNWQIVLGTLVGFFGAAFGSVGGVGGGGIFVPMLSLIIGF 115
Query: 117 DPKSATAISKCMIMGAAGSTVYYNLRLRHPTLDMPLIDYDLALLFQPMLMLGISIGVAFN 176
DPKSATAISKCMIMGA+ STVYYNLRLRHPTLDMP+IDYDLALL QPMLMLGISIGVAFN
Sbjct: 116 DPKSATAISKCMIMGASVSTVYYNLRLRHPTLDMPIIDYDLALLIQPMLMLGISIGVAFN 175
Query: 177 VMFADWMVTVLLIILFIGTSTKALFKGIDXXXXXXXXXXXXXXVLESES-KAADVDGQDY 235
V+F DW+VTVLLI+LF+GTSTKA KG + LES +V+ Y
Sbjct: 176 VIFPDWLVTVLLIVLFLGTSTKAFLKGSETWNKETIEKKEAAKRLESNGVSGTEVE---Y 232
Query: 236 KQLPSGPST----VHDEEVPIIKNIYWKELSLLLYVWLGFLAVQLAKEYVVPCSITYWIL 291
LP+ PST EEV II+N+YWKEL LL++VW+ FLA+Q++K+ + CS+ YW++
Sbjct: 233 VPLPAAPSTNPGNKKKEEVSIIENVYWKELGLLVFVWIVFLALQISKQNLANCSVAYWVI 292
Query: 292 NALQVPIAVSVALFEAICLYKGTRVIASKGKEITNWKIHQIVFYCFCGIVAGMVXXXXXX 351
N LQ+P+AV V+ +EA+ LY+G R+IASKG+ +N+ + Q+V YC GI+AG+V
Sbjct: 293 NLLQIPVAVGVSGYEAVALYQGRRIIASKGQGDSNFTVGQLVMYCTFGIIAGIVGGLLGL 352
Query: 352 XXXXXXXXXXXXXXXXPQXXXXXXXXXXXXXXXXXXXQYYLLDRFPVPYXXXXXXXXXXX 411
PQ +YYLL RFPVPY
Sbjct: 353 GGGFIMGPLFLELGVPPQVSSATATFAMTFSSSMSVVEYYLLKRFPVPYALYLVGVATIA 412
Query: 412 XXXGQHVVRKIIAVLGRASIIVFILALTIFVSAISLGGFGIENMVKKLKNQEYMGFENLC 471
GQHVVR++IA +GRAS+I+FILA IF+SAISLGG GI NM+ K++ EYMGFENLC
Sbjct: 413 AWVGQHVVRRLIAAIGRASLIIFILASMIFISAISLGGVGIVNMIGKIQRHEYMGFENLC 472
Query: 472 Q 472
+
Sbjct: 473 K 473
|
|
| TAIR|locus:2040605 AT2G36630 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2200061 AT1G11540 "AT1G11540" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2195773 AT1G61740 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2127343 AT4G21250 "AT4G21250" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2127348 AT4G21260 "AT4G21260" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| DICTYBASE|DDB_G0269644 DDB_G0269644 [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| eugene3.00570191 | hypothetical protein (477 aa) | |||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 474 | |||
| pfam01925 | 236 | pfam01925, TauE, Sulfite exporter TauE/SafE | 4e-11 | |
| pfam01925 | 236 | pfam01925, TauE, Sulfite exporter TauE/SafE | 2e-09 | |
| COG0730 | 258 | COG0730, COG0730, Predicted permeases [General fun | 5e-09 | |
| COG0730 | 258 | COG0730, COG0730, Predicted permeases [General fun | 2e-07 | |
| pfam01925 | 236 | pfam01925, TauE, Sulfite exporter TauE/SafE | 4e-07 | |
| COG0730 | 258 | COG0730, COG0730, Predicted permeases [General fun | 2e-05 | |
| pfam01925 | 236 | pfam01925, TauE, Sulfite exporter TauE/SafE | 6e-04 | |
| COG0730 | 258 | COG0730, COG0730, Predicted permeases [General fun | 0.001 |
| >gnl|CDD|216790 pfam01925, TauE, Sulfite exporter TauE/SafE | Back alignment and domain information |
|---|
Score = 62.6 bits (153), Expect = 4e-11
Identities = 27/108 (25%), Positives = 42/108 (38%)
Query: 335 YCFCGIVAGMVGGLLGLGGGFILGPLFLELGIPPQVASATSTFAMTFSSSMSVVQYYLLD 394
G++AG + GL G GGG I PL L L PP VA TS A+ +S + +
Sbjct: 1 LLLAGLLAGFLAGLAGFGGGLIAVPLLLLLLGPPHVAVGTSLLAVIATSLSGALAHRRRG 60
Query: 395 RFPVPYAAFFTLVATFAAFAGQHVVRKIIAVLGRASIIVFILALTIFV 442
L A G ++ + + + V +L + +
Sbjct: 61 NVDWRLLLRLLLGGLLGALLGALLLLLLPGAVLKLLFGVLLLLAALLM 108
|
This is a family of integral membrane proteins where the alignment appears to contain two duplicated modules of three transmembrane helices. The proteins are involved in the transport of anions across the cytoplasmic membrane during taurine metabolism as an exporter of sulfoacetate. This family used to be known as DUF81. Length = 236 |
| >gnl|CDD|216790 pfam01925, TauE, Sulfite exporter TauE/SafE | Back alignment and domain information |
|---|
| >gnl|CDD|223802 COG0730, COG0730, Predicted permeases [General function prediction only] | Back alignment and domain information |
|---|
| >gnl|CDD|223802 COG0730, COG0730, Predicted permeases [General function prediction only] | Back alignment and domain information |
|---|
| >gnl|CDD|216790 pfam01925, TauE, Sulfite exporter TauE/SafE | Back alignment and domain information |
|---|
| >gnl|CDD|223802 COG0730, COG0730, Predicted permeases [General function prediction only] | Back alignment and domain information |
|---|
| >gnl|CDD|216790 pfam01925, TauE, Sulfite exporter TauE/SafE | Back alignment and domain information |
|---|
| >gnl|CDD|223802 COG0730, COG0730, Predicted permeases [General function prediction only] | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 474 | |||
| PRK10621 | 266 | hypothetical protein; Provisional | 99.96 | |
| COG0730 | 258 | Predicted permeases [General function prediction o | 99.95 | |
| PF01925 | 240 | TauE: Sulfite exporter TauE/SafE; InterPro: IPR002 | 99.94 | |
| PRK10621 | 266 | hypothetical protein; Provisional | 99.3 | |
| COG0730 | 258 | Predicted permeases [General function prediction o | 99.24 | |
| PF01925 | 240 | TauE: Sulfite exporter TauE/SafE; InterPro: IPR002 | 98.99 | |
| PF04018 | 257 | DUF368: Domain of unknown function (DUF368); Inter | 94.05 |
| >PRK10621 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-26 Score=229.49 Aligned_cols=236 Identities=20% Similarity=0.216 Sum_probs=197.8
Q ss_pred HHHHHHHHHHHHHhhcccccchhchHHHHHHhhCCChhhHHHhHHHHHHHHHHHHHHHHHHhcCCCCCCCcccHHHHHHH
Q 011930 82 VVGSIVGFFGAALGSVGGVGGGGIFVPMLTLIIGFDPKSATAISKCMIMGAAGSTVYYNLRLRHPTLDMPLIDYDLALLF 161 (474)
Q Consensus 82 i~g~iiG~lag~l~~v~GiGGG~i~vP~L~ll~g~~~~~Ava~S~~~i~~~s~~~~~~~~~~~~~~~~~p~id~~l~l~l 161 (474)
+..+++|+++|++++..| |||.+.+|+|.. +++||++|+++|.+.++.+++++.+.|.+++| +||+...++
T Consensus 13 ~~l~~~g~~aG~l~gl~G-GGg~i~vP~L~~-~g~~~~~Av~tsl~~~~~~~~~~~~~~~~~~~-------v~~~~~~~l 83 (266)
T PRK10621 13 GVLFFVAMLAGFIDSIAG-GGGLLTIPALLA-AGMSPAQALATNKLQACGGSFSASLYFIRRKV-------VNLADQKLN 83 (266)
T ss_pred HHHHHHHHHHHHHhhhcc-ccHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCC-------CCHHHHHHH
Confidence 455667888888888889 999999999974 79999999999999999999999998888888 999999999
Q ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhhhhhHhhhhhHHHHHHHhhhhcccccccCcCCCCCCCC
Q 011930 162 QPMLMLGISIGVAFNVMFADWMVTVLLIILFIGTSTKALFKGIDTWKKETMMKKEAAKVLESESKAADVDGQDYKQLPSG 241 (474)
Q Consensus 162 ~~~~ilG~~lGa~l~~~lp~~~l~~ll~i~ll~~~~~~l~~~~~~~k~e~~~kk~~~~~~~~~~~~~~~~~~~~~~l~~~ 241 (474)
.+++++|+.+|+++..++|++.++.+++++++..+.+++.+ ++++ ++ +. .
T Consensus 84 ~~~~l~Ga~~G~~l~~~l~~~~l~~~~~~~ll~~~~~~l~~----~~~~---~~----------------~~-~------ 133 (266)
T PRK10621 84 IAMTFVGSMSGALLVQYVQADILRQILPILVIGIGLYFLLM----PKLG---EE----------------DR-Q------ 133 (266)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHC----Cccc---cc----------------cc-c------
Confidence 99999999999999999999999999998888877666533 0100 00 00 0
Q ss_pred CCCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHhhhhhhHHHHHHHHHHHHHhhccccccccc
Q 011930 242 PSTVHDEEVPIIKNIYWKELSLLLYVWLGFLAVQLAKEYVVPCSITYWILNALQVPIAVSVALFEAICLYKGTRVIASKG 321 (474)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~i~~~~~~~cs~~yw~~~~l~~~i~~~v~~~~~~~~~~~~~~~~~~~ 321 (474)
++ ++
T Consensus 134 ------~~--------~~-------------------------------------------------------------- 137 (266)
T PRK10621 134 ------RR--------LY-------------------------------------------------------------- 137 (266)
T ss_pred ------cc--------cc--------------------------------------------------------------
Confidence 00 00
Q ss_pred cccchhhhHHHHHHHHHHHHHHHHHHhhhccchhhHHHHHH-hcCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCcchhH
Q 011930 322 KEITNWKIHQIVFYCFCGIVAGMVGGLLGLGGGFILGPLFL-ELGIPPQVASATSTFAMTFSSSMSVVQYYLLDRFPVPY 400 (474)
Q Consensus 322 ~~~~~~~~~~~~~~~~~G~laG~vsGllGiGGG~ilvP~Ll-~~gl~~~~A~ATs~~~~~~ss~~s~~~~~~~G~i~~~~ 400 (474)
. .......|+++|+++|++|+|+|.+.+|.++ .++.|++++++|+.+..+.++..+...|...|.+||..
T Consensus 138 --~-------~~~~~~~G~~~G~lsG~~G~GgG~~~v~~l~~~~~~~~~~a~~ts~~~~~~~~~~~~~~~~~~G~v~~~~ 208 (266)
T PRK10621 138 --G-------LPFALIAGGCVGFYDGFFGPGAGSFYALAFVTLCGFNLAKATAHAKVLNATSNIGGLLLFILGGKVIWAT 208 (266)
T ss_pred --c-------hHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeehHHH
Confidence 0 0012457899999999999999999998775 67999999999999998999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Q 011930 401 AAFFTLVATFAAFAGQHVVRKIIAVLGRASIIVFILALTIF 441 (474)
Q Consensus 401 ~l~l~~gaiiGa~iG~~l~~~l~~~~~r~~lii~Il~~~i~ 441 (474)
++.+.+++++|+++|+++.+|++++.+|+.+..+++...+-
T Consensus 209 ~l~l~~g~~~G~~lG~~l~~~~~~~~lr~~~~~ll~~~~i~ 249 (266)
T PRK10621 209 GFVMLVGQFLGARLGARLVLSKGQKLIRPMIVIVSAVMSAK 249 (266)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCchHhHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999888876654433
|
|
| >COG0730 Predicted permeases [General function prediction only] | Back alignment and domain information |
|---|
| >PF01925 TauE: Sulfite exporter TauE/SafE; InterPro: IPR002781 This family is found in integral membrane proteins of prokaryotes which are uncharacterised | Back alignment and domain information |
|---|
| >PRK10621 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >COG0730 Predicted permeases [General function prediction only] | Back alignment and domain information |
|---|
| >PF01925 TauE: Sulfite exporter TauE/SafE; InterPro: IPR002781 This family is found in integral membrane proteins of prokaryotes which are uncharacterised | Back alignment and domain information |
|---|
| >PF04018 DUF368: Domain of unknown function (DUF368); InterPro: IPR007163 This is a predicted transmembrane family of unknown function | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 474 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 9e-05 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-04 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 44.1 bits (103), Expect = 9e-05
Identities = 63/452 (13%), Positives = 119/452 (26%), Gaps = 160/452 (35%)
Query: 24 LIMMEKLSNAERLLKDKDPQVFADEKETRPGFLCRVAHFLWQSGESSYEPVW-------- 75
++ + +RL D QVFA +R +P
Sbjct: 107 MMTRMYIEQRDRLYND--NQVFAKYNVSRL------------------QPYLKLRQALLE 146
Query: 76 --PFGWKVVVGSIVGFFGAALGSVGGVGGGGIFVPMLTLIIGFDPKSATAISKCM---IM 130
P ++ G V G G K+ A+ C+ +
Sbjct: 147 LRPAKNVLIDG------------VLGSG-----------------KTWVALDVCLSYKVQ 177
Query: 131 GAAGSTVYYNLRLRHPTLDMPLIDYDLALLFQPMLMLGISIGVAFNVMF-ADWMVTVLLI 189
+++ L L++ +++ LL+Q + N+ + L
Sbjct: 178 CKMDFKIFW-LNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRR 236
Query: 190 ILFIGTSTKALFKGI--DTWKKETMMKKEA----AKVL---ESESKAADVDGQDYKQLPS 240
+L L + + + A K+L + + +
Sbjct: 237 LLKSKPYENCLL--VLLNVQNAKAW---NAFNLSCKILLTTRFKQVTDFLSAATTTHISL 291
Query: 241 G--PSTVHDEEVPIIKNIYWKELSLLLYVWLGFLAVQLAKEYVVPCSITYWILNALQV-P 297
T+ +EV SLLL +L L +E L P
Sbjct: 292 DHHSMTLTPDEV----------KSLLL-KYLDCRPQDLPRE-------------VLTTNP 327
Query: 298 IAVSV---ALFEAICLYKGTRVIASKGKEITNWKIHQIVFYCFCGIVAGMVGGLLGLGGG 354
+S+ ++ + + + K + K+ I+
Sbjct: 328 RRLSIIAESIRDGLATWDNW-------KHVNCDKLTTIIESSLN---------------- 364
Query: 355 FILGP-----LFLELG-------IPPQVASATSTF--AMTFSSSMSVVQ----YYLLDRF 396
+L P +F L IP + S + S M VV Y L+++
Sbjct: 365 -VLEPAEYRKMFDRLSVFPPSAHIPTIL---LSLIWFDVIKSDVMVVVNKLHKYSLVEKQ 420
Query: 397 PVP-----YAAFFTLVATFAAFAGQHVVRKII 423
P + + L H R I+
Sbjct: 421 PKESTISIPSIYLELKVKLENEYALH--RSIV 450
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00