Citrus Sinensis ID: 011954
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 474 | 2.2.26 [Sep-21-2011] | |||||||
| D2Q1C4 | 424 | D-inositol 3-phosphate gl | yes | no | 0.369 | 0.412 | 0.288 | 4e-09 | |
| Q9R9N2 | 351 | Lipopolysaccharide core b | yes | no | 0.337 | 0.455 | 0.268 | 8e-09 | |
| A1R8N8 | 408 | D-inositol 3-phosphate gl | yes | no | 0.394 | 0.458 | 0.267 | 7e-08 | |
| P39862 | 380 | Capsular polysaccharide b | yes | no | 0.331 | 0.413 | 0.271 | 8e-08 | |
| O58762 | 415 | Trehalose synthase OS=Pyr | yes | no | 0.531 | 0.607 | 0.255 | 3e-07 | |
| Q8X0H8 | 471 | Alpha-1,3/1,6-mannosyltra | N/A | no | 0.181 | 0.182 | 0.395 | 2e-06 | |
| Q58577 | 351 | Uncharacterized glycosylt | yes | no | 0.242 | 0.327 | 0.303 | 3e-06 | |
| Q9DBE8 | 415 | Alpha-1,3/1,6-mannosyltra | yes | no | 0.738 | 0.843 | 0.221 | 6e-06 | |
| D0L476 | 458 | D-inositol 3-phosphate gl | no | no | 0.362 | 0.375 | 0.267 | 7e-06 | |
| D3Q051 | 443 | D-inositol 3-phosphate gl | no | no | 0.413 | 0.442 | 0.262 | 1e-05 |
| >sp|D2Q1C4|MSHA_KRIFD D-inositol 3-phosphate glycosyltransferase OS=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) GN=mshA PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 82/184 (44%), Gaps = 9/184 (4%)
Query: 261 RESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNA 320
R ++GVR+D ++ A + + K DL + + L+ R+ +L+ + AV+ G N
Sbjct: 223 RRAVGVREDAIVLAFVGRIQPLKAPDLLIRAAARMLE--RQPELRDRLVVAVIGGPSGNG 280
Query: 321 QTKFET--ELRNFVAEKKIQDHVHFVNKTLTVSPYLASIDVLVQNSQARGECFGRITIEA 378
E EL + + V + + Y A+ V V + E FG + +EA
Sbjct: 281 MEHPEAHAELARRLGVDDVTRFVKPMPRPGLADWYRAASVVCVPSYS---ESFGLVALEA 337
Query: 379 MAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGY 438
A PV+ A GG V +G TGLL P GV A+ + +AT R TMGK
Sbjct: 338 QACGTPVVAAAVGGLTTAVTDGVTGLLVP--GHGVDDFADALAAIATDPGTRETMGKAAV 395
Query: 439 ERVK 442
E +
Sbjct: 396 EHAQ 399
|
Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2-acetamido-2-deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway. Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) (taxid: 479435) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 2EC: 5EC: 0 |
| >sp|Q9R9N2|LPSB_RHIME Lipopolysaccharide core biosynthesis mannosyltransferase LpsB OS=Rhizobium meliloti (strain 1021) GN=lpsB PE=3 SV=1 | Back alignment and function description |
|---|
Score = 62.4 bits (150), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 79/179 (44%), Gaps = 19/179 (10%)
Query: 229 MPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLF 288
+P T ++H ++K + + A++ +LG+ V KG DLF
Sbjct: 134 VPNTVILHGIDTKRFQPPFDKTEAKK--------ALGLDPAKKFVGCFGRVRHQKGTDLF 185
Query: 289 LHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTL 348
+ S L P A+V G FE+EL+ VA+ + D + FV +
Sbjct: 186 VDSMIALLPC-------RPDWGAIVAGRATGPHLAFESELKERVAKAGLADRILFVGEHT 238
Query: 349 TVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGT--TGLL 405
+ + ++D+ V + R E FG +EAMA +PV+ T G E+V G+ TGL+
Sbjct: 239 NIPDWYRALDLFV--APQRWEGFGLTPLEAMATGVPVVATDVGAFSELVTGGSEETGLI 295
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Acts at transfer of mannose group to a 3-deoxy-D-mono octulonic acid (KDO) via an alpha-1,5 linkage. Rhizobium meliloti (strain 1021) (taxid: 266834) EC: 2 EC: . EC: 4 EC: . EC: - EC: . EC: - |
| >sp|A1R8N8|MSHA_ARTAT D-inositol 3-phosphate glycosyltransferase OS=Arthrobacter aurescens (strain TC1) GN=mshA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 58.9 bits (141), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 99/217 (45%), Gaps = 30/217 (13%)
Query: 231 ETYVVHLGNSKDLMDIAEDSVARRVL----REHVRESLGVRDDDLLFAIINSVSRGKGQD 286
+ V H G D +D+A V +V R R GVR D + R KG
Sbjct: 176 DELVSHYGADLDRIDVAPPGVDLKVFTPSFRRKSRSLRGVRPDSFHILFAGRIQRLKGPQ 235
Query: 287 LFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNK 346
+F+ ++ ++R+++ + + ++GS A+ + L++F+ + + D V ++
Sbjct: 236 VFV----KAAGILRKRRPDI-DLEMTILGSLSGAK---DFNLQHFIEDAGLADVV--THR 285
Query: 347 TLTVSPYLAS----IDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTT 402
V+P LAS DV+V S + E FG + +EA A PV+ T GG + +G T
Sbjct: 286 PPVVAPELASWFRSADVVVMPSFS--ESFGLVALEAQACGTPVVATNVGGLSRAISDGRT 343
Query: 403 GLL----HPTGKEGVTPLANNIVKLATHVERRLTMGK 435
G+L HP+ A+ + L V+ R MG+
Sbjct: 344 GILVDGHHPSD------WADALEDLYDDVQTREDMGR 374
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Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2-acetamido-2-deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway. Arthrobacter aurescens (strain TC1) (taxid: 290340) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 5 EC: 0 |
| >sp|P39862|CAPM_STAAU Capsular polysaccharide biosynthesis glycosyltransferase CapM OS=Staphylococcus aureus GN=capM PE=3 SV=1 | Back alignment and function description |
|---|
Score = 58.9 bits (141), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 27/184 (14%)
Query: 268 DDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTK---- 323
+D+ + + + + KG +H +S ++I K V + V+GS +
Sbjct: 195 NDNFVIGYVGRIVKDKG----IHELIQSFKIIVSKGYNVKLL---VIGSLETENSIDESD 247
Query: 324 --FETELRNFVAEKKIQDHVHFVNKTLTVSPYLASIDVLVQNSQARGECFGRITIEAMAF 381
F T+ N V K + D + F N +++V V + G FG ++IEA A
Sbjct: 248 YLFLTQNPNVVLIKHVSDPISFYN----------NMNVFVFPTHREG--FGNVSIEAQAL 295
Query: 382 QLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERV 441
++PV+ T G ++ VVNG TG + G +A I KL R T+G G +RV
Sbjct: 296 EVPVITTNVTGAIDTVVNGETGFIVEKGD--FKAIAEKIEKLINDESLRETIGHNGRKRV 353
Query: 442 KDRF 445
+++F
Sbjct: 354 ENKF 357
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Required for the biosynthesis of type 1 capsular polysaccharide. Staphylococcus aureus (taxid: 1280) EC: 2 EC: . EC: 4 EC: . EC: - EC: . EC: - |
| >sp|O58762|TRET_PYRHO Trehalose synthase OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=treT PE=1 SV=2 | Back alignment and function description |
|---|
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 117/278 (42%), Gaps = 26/278 (9%)
Query: 196 YVKHLPFVAGAMID-SYTTAEYWKNRTR-----ERLGIRMPETYVVHLGNSKD-LMDIAE 248
Y K P++ ID S E+W+ R +R +PE L +K +M +
Sbjct: 143 YEKKSPWLWRCHIDLSSPNREFWEFLRRFVEKYDRYIFHLPEYVQPELDRNKAVIMPPSI 202
Query: 249 DSVARRVLREHVRESLGVR---DDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQ 305
D ++ + + E L + D D II VSR ++ +++ R+ K +
Sbjct: 203 DPLSEKNVELKQTEILRILERFDVDPEKPIITQVSRFDP----WKGIFDVIEIYRKVKEK 258
Query: 306 VPSMHAVVVG----SDMNAQTKFETELRNFVAEKKIQDHVHFVN-KTLTVSPYLASIDVL 360
+P + ++VG D FE LR + ++ + + V+ + + DV+
Sbjct: 259 IPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAREVNAFQRASDVI 318
Query: 361 VQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNI 420
+Q S G FG EAM PV+G A GG +V+G TG L E V +
Sbjct: 319 LQMSIREG--FGLTVTEAMWKGKPVIGRAVGGIKFQIVDGETGFLVRDANEAV----EKV 372
Query: 421 VKLATHVERRLTMGKKGYERVKDRF-LEHHMSQRIALV 457
+ L H E MG K ERV+ F + HM + + ++
Sbjct: 373 LYLLKHPEVSKEMGAKAKERVRKNFIITKHMERYLDIL 410
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Synthesizes trehalose from ADP-, UDP- or GDP-glucose and glucose. Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) (taxid: 70601) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 4 EC: 5 |
| >sp|Q8X0H8|ALG2_NEUCR Alpha-1,3/1,6-mannosyltransferase alg-2 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=alg-2 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 42/86 (48%)
Query: 369 ECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVE 428
E FG + +EAM +PVL GG E VV G TG L G + V E
Sbjct: 345 EHFGIVPLEAMLRGVPVLAANNGGPTETVVEGETGWLRDPNDVGEWAKVMDKVLNGMGEE 404
Query: 429 RRLTMGKKGYERVKDRFLEHHMSQRI 454
MGKKG ERVK RF + M++R+
Sbjct: 405 ELKRMGKKGVERVKGRFADTQMAERL 430
|
Mannosylates Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) (taxid: 367110) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 5 EC: 7 |
| >sp|Q58577|Y1178_METJA Uncharacterized glycosyltransferase MJ1178 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ1178 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 7/122 (5%)
Query: 320 AQTKFETELRNFVAEKKIQDHVHFVNKTL--TVSPYLASIDVLVQNSQARGECFGRITIE 377
K ++ NFV + + H+ + + V+ ++ LV S++ G FG + +E
Sbjct: 212 GDGKLYKKIENFVVKNNLS-HIELLGRKSFDEVASFMRKCSFLVVPSRSEG--FGMVAVE 268
Query: 378 AMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKG 437
MA PV+ T GG EIV++G GLL K L I++L + E R T+G+ G
Sbjct: 269 GMACSKPVIATRVGGLGEIVIDGYNGLL--AEKNNPNDLKEKILELINNEELRKTLGENG 326
Query: 438 YE 439
E
Sbjct: 327 KE 328
|
Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (taxid: 243232) EC: 2 EC: . EC: 4 EC: . EC: - EC: . EC: - |
| >sp|Q9DBE8|ALG2_MOUSE Alpha-1,3/1,6-mannosyltransferase ALG2 OS=Mus musculus GN=Alg2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 90/407 (22%), Positives = 157/407 (38%), Gaps = 57/407 (14%)
Query: 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGAEV-VWITNQKPN----EPDEVIYSLEHK 128
S VL + ++ + G L+++ A L+ G +V +W + PN E E+
Sbjct: 14 SPSVLFLHPDMGIGGAERLVLDAALALQEYGCDVKIWTAHYDPNHCFIETRELSVQCAGD 73
Query: 129 MLDRGVQVLSAKGEKAINTALNADLVVLNTAVAGKWLDGVLKDKVSQVLP---------K 179
L R + +G + L + ++G+ D V+ D+VS +P +
Sbjct: 74 WLPRSLG-WGGRGAAICSYVRMVFLALYVLFLSGEEFDVVVCDQVSACIPVFKLARRRKR 132
Query: 180 VLWWIH------EMRGHYFKLEYVKHLPFVAG--------AMIDSYTTAEYWKNRTRERL 225
VL++ H R K Y + ++ +++S TA +K T + L
Sbjct: 133 VLFYCHFPDLLLTQRNSALKKFYRAPIDWIEEYTTGMADRILVNSQYTASVFKE-TFKTL 191
Query: 226 GIRMPETYVVHLG-NSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKG 284
R P+ L S DL ++ ++ + L + LF IN R K
Sbjct: 192 SHRNPDVLYPSLNIGSFDL------AIPEKI------DDLVPKGKQFLFLSINRYERKKN 239
Query: 285 QDLFLHSFYESLQLIREKKLQVPSMHAVVVG---SDMNAQTKFETELRNFVAEKKIQDHV 341
L L S + + ++ +H + G + + EL+ V E ++ HV
Sbjct: 240 LPLALRSLVQLRNRLPSQEWD--KVHLFMAGGYDDRIPENVEHYKELKKMVQESDLERHV 297
Query: 342 HFV---NKTLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVV 398
F+ + +S + VL S E FG + +EAM Q PV+ GG +E +V
Sbjct: 298 TFLRSFSDRQKISLLHGCLCVLYTPSN---EHFGIVPLEAMYMQCPVIAVNNGGPLESIV 354
Query: 399 NGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRF 445
+ TG L + + + K + TMG G RV ++F
Sbjct: 355 HKVTGFL---CEPDPVHFSEAMEKFIHKPSLKATMGLAGKARVAEKF 398
|
Mannosylates Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. Mus musculus (taxid: 10090) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 5 EC: 7 |
| >sp|D0L476|MSHA_GORB4 D-inositol 3-phosphate glycosyltransferase OS=Gordonia bronchialis (strain ATCC 25592 / DSM 43247 / JCM 3198 / NCTC 10667) GN=mshA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 72/183 (39%), Gaps = 11/183 (6%)
Query: 257 REHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGS 316
RE R SLG+ ++ + + + K DL + + + LIR + + ++VG
Sbjct: 215 REMARTSLGLDQNEAIVTFVGRIQPLKAPDLLIEA---AAPLIRRSRTSRRPVRVLIVGG 271
Query: 317 DMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTV---SPYLASIDVLVQNSQARGECFGR 373
+ T L + + I D V F+ Y AS V V + E FG
Sbjct: 272 PSGSGLDRPTALIDLAHDLGIADAVTFLPPQAPARLADVYRASNLVAVPSHS---ESFGL 328
Query: 374 ITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTM 433
+ IEA A PVL GG V G TG+L G V N + K +R M
Sbjct: 329 VAIEAQACGTPVLAADVGGLSVAVAGGRTGVL--VGSHAVGDWTNALEKALAQPDRLAEM 386
Query: 434 GKK 436
G+
Sbjct: 387 GRN 389
|
Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2-acetamido-2-deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway. Gordonia bronchialis (strain ATCC 25592 / DSM 43247 / JCM 3198 / NCTC 10667) (taxid: 526226) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 5 EC: 0 |
| >sp|D3Q051|MSHA_STANL D-inositol 3-phosphate glycosyltransferase OS=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) GN=mshA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 79/206 (38%), Gaps = 10/206 (4%)
Query: 260 VRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMN 319
R LG+ DD L+ + K D+ + + L E P + VVVG
Sbjct: 232 ARRRLGLPDDALVLGFAGRIQPLKAPDVLVRAVARLRALNPE---LAPRLRLVVVGGPSG 288
Query: 320 AQTKFETELRNFVAEKKIQDHVHFVNKTL--TVSPYLASIDVLVQNSQARGECFGRITIE 377
L + AE I D V F+ ++ + DV+ S E FG + +E
Sbjct: 289 NGADNPRWLHDLAAELGIADAVTFLKPRAGHELAEVFRACDVVGVPSY--NETFGLVALE 346
Query: 378 AMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKG 437
A A PV+ A GG V +G +GLL E T AN + KL T RR +
Sbjct: 347 AQACGTPVVAAAVGGLTTAVADGHSGLLIRGHDE--TDWANALDKLVTDAPRRARLAAGA 404
Query: 438 YERVKDRFLEHHMSQRIALVLREVLQ 463
+ RF H + + + +Q
Sbjct: 405 LDHAA-RFTWSHTADDLLGAYGDAIQ 429
|
Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2-acetamido-2-deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway. Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) (taxid: 446470) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 5 EC: 0 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 474 | ||||||
| 255538754 | 477 | glycosyltransferase, putative [Ricinus c | 0.981 | 0.974 | 0.838 | 0.0 | |
| 302142552 | 463 | unnamed protein product [Vitis vinifera] | 0.970 | 0.993 | 0.786 | 0.0 | |
| 225458171 | 479 | PREDICTED: uncharacterized protein LOC10 | 0.983 | 0.972 | 0.778 | 0.0 | |
| 356518559 | 464 | PREDICTED: uncharacterized protein LOC10 | 0.974 | 0.995 | 0.790 | 0.0 | |
| 147771878 | 495 | hypothetical protein VITISV_033235 [Viti | 0.970 | 0.929 | 0.783 | 0.0 | |
| 449436130 | 472 | PREDICTED: uncharacterized protein LOC10 | 0.985 | 0.989 | 0.775 | 0.0 | |
| 224133786 | 481 | predicted protein [Populus trichocarpa] | 0.985 | 0.970 | 0.75 | 0.0 | |
| 356564312 | 833 | PREDICTED: proteasome-activating nucleot | 0.976 | 0.555 | 0.784 | 0.0 | |
| 15222229 | 463 | UDP-glycosyltransferase-like protein [Ar | 0.955 | 0.978 | 0.765 | 0.0 | |
| 297839425 | 458 | glycosyl transferase family 1 protein [A | 0.945 | 0.978 | 0.770 | 0.0 |
| >gi|255538754|ref|XP_002510442.1| glycosyltransferase, putative [Ricinus communis] gi|223551143|gb|EEF52629.1| glycosyltransferase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 742 bits (1915), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/477 (83%), Positives = 426/477 (89%), Gaps = 12/477 (2%)
Query: 1 MGKQSSAWITMQKKKRWQLMILVLFTLSTAMLFFIRSTANSCNTSSITTKTTTTATHFNS 60
M KQSSAWIT + K RW LMIL FTLST ++F IRS ++SC++SS T T TTA
Sbjct: 1 MAKQSSAWIT-KHKNRWPLMILAFFTLSTLIVFSIRSASDSCHSSSNITTTATTANVDRF 59
Query: 61 DEEK-----------ASNPLNFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVW 109
E K A NPL+FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVW
Sbjct: 60 GEPKVDSKPQIHSSVAPNPLDFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVW 119
Query: 110 ITNQKPNEPDEVIYSLEHKMLDRGVQVLSAKGEKAINTALNADLVVLNTAVAGKWLDGVL 169
ITNQKP E DEVIYSLE+KMLDRGVQV SAKG+KAI+TAL ADLVVLNTAVAGKWLD L
Sbjct: 120 ITNQKPTETDEVIYSLENKMLDRGVQVFSAKGQKAIDTALKADLVVLNTAVAGKWLDATL 179
Query: 170 KDKVSQVLPKVLWWIHEMRGHYFKLEYVKHLPFVAGAMIDSYTTAEYWKNRTRERLGIRM 229
K+ V QVLPKVLWWIHEMRGHYFKLEYVKHLPFVAGAMIDS+TTAEYWKNRTRERLGI+M
Sbjct: 180 KESVQQVLPKVLWWIHEMRGHYFKLEYVKHLPFVAGAMIDSHTTAEYWKNRTRERLGIKM 239
Query: 230 PETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFL 289
PETYVVHLGNSKDLM++AEDSVA+RVL EHVRESLGVR+DDLLFAIINSVSRGKGQDLFL
Sbjct: 240 PETYVVHLGNSKDLMEVAEDSVAKRVLCEHVRESLGVRNDDLLFAIINSVSRGKGQDLFL 299
Query: 290 HSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLT 349
SFYESLQLI+EKKL+VPS+HAVVVGSDMNAQTKFE ELR FV EKKIQD VHFVNKTLT
Sbjct: 300 RSFYESLQLIQEKKLKVPSLHAVVVGSDMNAQTKFEMELRKFVQEKKIQDRVHFVNKTLT 359
Query: 350 VSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTG 409
V+PYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHP G
Sbjct: 360 VAPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPAG 419
Query: 410 KEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRFLEHHMSQRIALVLREVLQYAK 466
KEGVTPLANNIVKLATHVERRLTMGK GY+RVK+RFLEHHMS RIALVL+EVL+ AK
Sbjct: 420 KEGVTPLANNIVKLATHVERRLTMGKNGYKRVKERFLEHHMSHRIALVLKEVLRKAK 476
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|302142552|emb|CBI19755.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 728 bits (1878), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/468 (78%), Positives = 417/468 (89%), Gaps = 8/468 (1%)
Query: 1 MGKQSSAWITMQKKKRWQLMILVLFTLSTAMLFFIRSTANSCNTSSITTKTTTTATHFNS 60
M KQS++W+T K RW L+++ L + ST ++ IR+ ++SCNT+S T S
Sbjct: 1 MAKQSTSWLTFHK--RWPLLLVALLSTSTVIVLLIRAASDSCNTNS------NTRIQVTS 52
Query: 61 DEEKASNPLNFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDE 120
E SNPL FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVW+T QKP + DE
Sbjct: 53 QVETPSNPLRFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWLTIQKPTDSDE 112
Query: 121 VIYSLEHKMLDRGVQVLSAKGEKAINTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKV 180
VIYSLEH+MLDRGV+V AKG++AI+TAL ADLVVLNTAVAGKWLD V+K+ V ++LPKV
Sbjct: 113 VIYSLEHRMLDRGVKVFPAKGQEAIDTALKADLVVLNTAVAGKWLDSVVKENVPRILPKV 172
Query: 181 LWWIHEMRGHYFKLEYVKHLPFVAGAMIDSYTTAEYWKNRTRERLGIRMPETYVVHLGNS 240
LWWIHEMRGHYFKLEYVKHLP+VAGAMIDS+TTAEYWKNRTRERLGI+MPETYVVHLGNS
Sbjct: 173 LWWIHEMRGHYFKLEYVKHLPYVAGAMIDSHTTAEYWKNRTRERLGIKMPETYVVHLGNS 232
Query: 241 KDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIR 300
K+LM+IAE++VA+RVLREHVRESLGVR++DLLFA+INSVSRGKGQDLFL SFY+SLQLI+
Sbjct: 233 KELMEIAENNVAKRVLREHVRESLGVRNEDLLFAVINSVSRGKGQDLFLRSFYQSLQLIK 292
Query: 301 EKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYLASIDVL 360
+KLQVPS+HAV+VGSDMNAQTKFETELRNFV E KIQD VHF+NKTLTV+PYLASIDVL
Sbjct: 293 GRKLQVPSIHAVIVGSDMNAQTKFETELRNFVVENKIQDQVHFINKTLTVAPYLASIDVL 352
Query: 361 VQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNI 420
VQNSQARGECFGRITIEAMAFQLPVLGTAAGGT EIVVNGTTGLLH GKEGV PLANNI
Sbjct: 353 VQNSQARGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHNVGKEGVKPLANNI 412
Query: 421 VKLATHVERRLTMGKKGYERVKDRFLEHHMSQRIALVLREVLQYAKIH 468
VKLAT+VERRLTMGK+GYERVK+RFLEHHMS+RIA VL+EVL+ A+ H
Sbjct: 413 VKLATNVERRLTMGKRGYERVKERFLEHHMSERIASVLKEVLKKAENH 460
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225458171|ref|XP_002281084.1| PREDICTED: uncharacterized protein LOC100257473 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 726 bits (1873), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/478 (77%), Positives = 422/478 (88%), Gaps = 12/478 (2%)
Query: 1 MGKQSSAWITMQKKKRWQLMILVLFTLSTAMLFFIRSTANSCNTSSITTKTT-------- 52
M KQS++W+T K RW L+++ L + ST ++ IR+ ++SCNT+S+TT TT
Sbjct: 1 MAKQSTSWLTFHK--RWPLLLVALLSTSTVIVLLIRAASDSCNTNSVTTTTTITTTPHYS 58
Query: 53 --TTATHFNSDEEKASNPLNFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWI 110
T S E SNPL FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVW+
Sbjct: 59 YENTRIQVTSQVETPSNPLRFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWL 118
Query: 111 TNQKPNEPDEVIYSLEHKMLDRGVQVLSAKGEKAINTALNADLVVLNTAVAGKWLDGVLK 170
T QKP + DEVIYSLEH+MLDRGV+V AKG++AI+TAL ADLVVLNTAVAGKWLD V+K
Sbjct: 119 TIQKPTDSDEVIYSLEHRMLDRGVKVFPAKGQEAIDTALKADLVVLNTAVAGKWLDSVVK 178
Query: 171 DKVSQVLPKVLWWIHEMRGHYFKLEYVKHLPFVAGAMIDSYTTAEYWKNRTRERLGIRMP 230
+ V ++LPKVLWWIHEMRGHYFKLEYVKHLP+VAGAMIDS+TTAEYWKNRTRERLGI+MP
Sbjct: 179 ENVPRILPKVLWWIHEMRGHYFKLEYVKHLPYVAGAMIDSHTTAEYWKNRTRERLGIKMP 238
Query: 231 ETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLH 290
ETYVVHLGNSK+LM+IAE++VA+RVLREHVRESLGVR++DLLFA+INSVSRGKGQDLFL
Sbjct: 239 ETYVVHLGNSKELMEIAENNVAKRVLREHVRESLGVRNEDLLFAVINSVSRGKGQDLFLR 298
Query: 291 SFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTV 350
SFY+SLQLI+ +KLQVPS+HAV+VGSDMNAQTKFETELRNFV E KIQD VHF+NKTLTV
Sbjct: 299 SFYQSLQLIKGRKLQVPSIHAVIVGSDMNAQTKFETELRNFVVENKIQDQVHFINKTLTV 358
Query: 351 SPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGK 410
+PYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGT EIVVNGTTGLLH GK
Sbjct: 359 APYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHNVGK 418
Query: 411 EGVTPLANNIVKLATHVERRLTMGKKGYERVKDRFLEHHMSQRIALVLREVLQYAKIH 468
EGV PLANNIVKLAT+VERRLTMGK+GYERVK+RFLEHHMS+RIA VL+EVL+ A+ H
Sbjct: 419 EGVKPLANNIVKLATNVERRLTMGKRGYERVKERFLEHHMSERIASVLKEVLKKAENH 476
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356518559|ref|XP_003527946.1| PREDICTED: uncharacterized protein LOC100791337 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 722 bits (1864), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/467 (79%), Positives = 410/467 (87%), Gaps = 5/467 (1%)
Query: 1 MGKQSSAWITMQKKKRWQLMILVLFTLSTAMLFFIRST-ANSCNTSSITTKTTTTATHFN 59
M K S A KKRW +M+ ++ST + +RS ++SCNT+ T
Sbjct: 1 MAKHSVA----MAKKRWPIMLAAFLSVSTVTVLLMRSNNSDSCNTNHFTVAQDNQIRSPV 56
Query: 60 SDEEKASNPLNFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWITNQKPNEPD 119
AS+PL FMKSKLVL+VSHELSLSGGPLLLMELAFLLRGVG++VVWI+NQKP+E D
Sbjct: 57 QLTNAASSPLIFMKSKLVLMVSHELSLSGGPLLLMELAFLLRGVGSDVVWISNQKPSEHD 116
Query: 120 EVIYSLEHKMLDRGVQVLSAKGEKAINTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPK 179
V+YSLE KMLDRGVQVLSAKGE AI+TAL AD+V+LNTAVAGKWLD +LK+KV+ VLPK
Sbjct: 117 RVVYSLESKMLDRGVQVLSAKGENAIDTALKADMVILNTAVAGKWLDAILKEKVAHVLPK 176
Query: 180 VLWWIHEMRGHYFKLEYVKHLPFVAGAMIDSYTTAEYWKNRTRERLGIRMPETYVVHLGN 239
VLWWIHEMRGHYFK+EYVKHLPFVAGAMIDS+TTAEYWKNRTRERLGI MPETYVVHLGN
Sbjct: 177 VLWWIHEMRGHYFKVEYVKHLPFVAGAMIDSHTTAEYWKNRTRERLGIEMPETYVVHLGN 236
Query: 240 SKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLI 299
SK+LM++AEDSVA+RVLREHVRESLGVR+DDLLFAIINSVSRGKGQDLFL SFYESLQLI
Sbjct: 237 SKELMEVAEDSVAKRVLREHVRESLGVRNDDLLFAIINSVSRGKGQDLFLRSFYESLQLI 296
Query: 300 REKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYLASIDV 359
+EKKLQ+P +HAV+VGSDMNAQTKFE ELR FV EKKIQ+ VHFVNKTL V+PYLA+IDV
Sbjct: 297 QEKKLQLPFLHAVIVGSDMNAQTKFEMELRKFVVEKKIQNRVHFVNKTLAVAPYLAAIDV 356
Query: 360 LVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANN 419
LVQNSQARGECFGRITIEAMAF+LPVLGTAAGGTMEIVVNGTTGLLHP GKEGVTPLA N
Sbjct: 357 LVQNSQARGECFGRITIEAMAFRLPVLGTAAGGTMEIVVNGTTGLLHPVGKEGVTPLAKN 416
Query: 420 IVKLATHVERRLTMGKKGYERVKDRFLEHHMSQRIALVLREVLQYAK 466
IVKLA+HVE+RLTMGKKGYERVK+RFLEHHMSQRIALVL+EVLQ AK
Sbjct: 417 IVKLASHVEKRLTMGKKGYERVKERFLEHHMSQRIALVLKEVLQKAK 463
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147771878|emb|CAN73426.1| hypothetical protein VITISV_033235 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 719 bits (1855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/472 (78%), Positives = 417/472 (88%), Gaps = 12/472 (2%)
Query: 1 MGKQSSAWITMQKKKRWQLMILVLFTLSTAMLFFIRSTANSCNTSSITTKTT-------- 52
M KQS++W+T K RW L+++ L + ST ++ IR+ ++SCNT+S+TT TT
Sbjct: 1 MAKQSTSWLTFHK--RWPLLLVALLSTSTVIVLLIRAASDSCNTNSVTTTTTITTTPHYS 58
Query: 53 --TTATHFNSDEEKASNPLNFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWI 110
T S E SNPL FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVW+
Sbjct: 59 YENTRIQVTSQVETPSNPLRFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWL 118
Query: 111 TNQKPNEPDEVIYSLEHKMLDRGVQVLSAKGEKAINTALNADLVVLNTAVAGKWLDGVLK 170
T QKP + DEVIYSLEH+MLDRGV+V AKG++AI+TAL ADLVVLNTAVAGKWLD V+K
Sbjct: 119 TIQKPTDSDEVIYSLEHRMLDRGVKVFPAKGQEAIDTALKADLVVLNTAVAGKWLDSVVK 178
Query: 171 DKVSQVLPKVLWWIHEMRGHYFKLEYVKHLPFVAGAMIDSYTTAEYWKNRTRERLGIRMP 230
+ V ++LPKVLWWIHEMRGHYFKLEYVKHLP+VAGAMIDS+TTAEYWKNRTRERLGI+MP
Sbjct: 179 ENVPRILPKVLWWIHEMRGHYFKLEYVKHLPYVAGAMIDSHTTAEYWKNRTRERLGIKMP 238
Query: 231 ETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLH 290
ETYVVHLGNSK+LM+IAE++VA+RVLREHVRESLGVR++DLLFAIINSVSRGKGQDLFL
Sbjct: 239 ETYVVHLGNSKELMEIAENNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLR 298
Query: 291 SFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTV 350
SFY+SLQLI+ +KLQVPS+HAV+VGSDMNAQTKFETELRNFV E KIQD VHF+NKTLTV
Sbjct: 299 SFYQSLQLIKGRKLQVPSIHAVIVGSDMNAQTKFETELRNFVVENKIQDQVHFINKTLTV 358
Query: 351 SPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGK 410
+PYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGT EIVVNGTTGLLH GK
Sbjct: 359 APYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHNVGK 418
Query: 411 EGVTPLANNIVKLATHVERRLTMGKKGYERVKDRFLEHHMSQRIALVLREVL 462
EGV PLANNIVKLAT+VERRLTMGK+GYERVK+RFLEHHMS+RIA VL+E L
Sbjct: 419 EGVKPLANNIVKLATNVERRLTMGKRGYERVKERFLEHHMSERIASVLKEEL 470
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449436130|ref|XP_004135847.1| PREDICTED: uncharacterized protein LOC101206589 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 712 bits (1837), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/472 (77%), Positives = 416/472 (88%), Gaps = 5/472 (1%)
Query: 1 MGKQSSAWITMQKKKRWQLMILVLFTLSTAMLFFIRSTANSC----NTSSITTKTTTTAT 56
M K+ +TM KK RW LMIL L ++STAM+FF+R+T +SC N + K +
Sbjct: 1 MMKRPFPSVTMSKK-RWPLMILALVSISTAMVFFMRTTFDSCTGNDNRRFVEEKGIGSKI 59
Query: 57 HFNSDEEKASNPLNFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWITNQKPN 116
+E KA NPL+FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVG +VVWITNQKP
Sbjct: 60 LSPQNERKAPNPLDFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTQVVWITNQKPP 119
Query: 117 EPDEVIYSLEHKMLDRGVQVLSAKGEKAINTALNADLVVLNTAVAGKWLDGVLKDKVSQV 176
EPDEV+YSLE KMLDRGVQVLSAK ++A+ TAL A LVVLNTAVAGKWLD VLK+ V +V
Sbjct: 120 EPDEVVYSLERKMLDRGVQVLSAKEQEAVETALKAHLVVLNTAVAGKWLDAVLKENVPRV 179
Query: 177 LPKVLWWIHEMRGHYFKLEYVKHLPFVAGAMIDSYTTAEYWKNRTRERLGIRMPETYVVH 236
LPKVLWWIHEMRG+YFK+EYVKHLPFVAGAMIDS+TTAEYWKNRT +RLGI+MPETYVVH
Sbjct: 180 LPKVLWWIHEMRGNYFKVEYVKHLPFVAGAMIDSHTTAEYWKNRTWDRLGIQMPETYVVH 239
Query: 237 LGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESL 296
LGNSKDLM++AE++VA+RVLREH+RESLGVR++D+LFAIINSVSRGKGQDLFL +F++SL
Sbjct: 240 LGNSKDLMEVAENNVAKRVLREHIRESLGVRNEDILFAIINSVSRGKGQDLFLRAFHQSL 299
Query: 297 QLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYLAS 356
Q+I++KKL+VP +HAVVVGSDMNA TKFETELRNFV E KIQD VHFVNKTL+V+PYLAS
Sbjct: 300 QMIQDKKLRVPRIHAVVVGSDMNAHTKFETELRNFVNENKIQDRVHFVNKTLSVAPYLAS 359
Query: 357 IDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPL 416
IDVLVQNSQ RGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHP GKEGVTPL
Sbjct: 360 IDVLVQNSQGRGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPAGKEGVTPL 419
Query: 417 ANNIVKLATHVERRLTMGKKGYERVKDRFLEHHMSQRIALVLREVLQYAKIH 468
A+NIVKLATHVERRLTMGKKGYERV+ FLE HM QRIA+VL++V++ AK H
Sbjct: 420 AHNIVKLATHVERRLTMGKKGYERVRQMFLEQHMMQRIAVVLKKVMEKAKSH 471
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224133786|ref|XP_002327680.1| predicted protein [Populus trichocarpa] gi|222836765|gb|EEE75158.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 692 bits (1787), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/472 (75%), Positives = 407/472 (86%), Gaps = 5/472 (1%)
Query: 5 SSAWITMQKKKRWQLMILVLFTLSTAMLFFIRSTANSCNTSSI----TTKTTTTATHFNS 60
++ W +KRW L +L++ ++ST + FFI+S +SC+ + A F++
Sbjct: 11 TAGWAPPSVQKRWLLTLLIMLSVSTLIAFFIKSAFDSCDPPHPHNFDVAASNKPAKVFSN 70
Query: 61 DEEKASNPLNFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDE 120
+ A +PL+FMKSKLVLLVSHELSLSGGPLLLMELAFLLR VG EV WIT QKP+E DE
Sbjct: 71 SIKTAPSPLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRSVGTEVFWITIQKPSETDE 130
Query: 121 VIYSLEHKMLDRGVQVLSAKGEKAINTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKV 180
V+YSLE KML RGVQVLSAKG++AI+TA ADLVVLNTAVAGKWLD VLK+ V +VLPKV
Sbjct: 131 VVYSLEQKMLVRGVQVLSAKGQEAIDTAFKADLVVLNTAVAGKWLDAVLKENVPRVLPKV 190
Query: 181 LWWIHEMRGHYFKLEYVKHLPFVAGAMIDSYTTAEYWKNRTRERLGIRMPETYVVHLGNS 240
LWWIHEMRGHYFKL+YVKHLP V GAMIDS+ TAEYWKNRT+ERL I+MPETYVVHLGNS
Sbjct: 191 LWWIHEMRGHYFKLDYVKHLPLVGGAMIDSHVTAEYWKNRTQERLRIKMPETYVVHLGNS 250
Query: 241 KDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIR 300
K+LM++AEDSVA+RVLREH+RESLGVRD+D+LFAIINSVSRGKGQDLFL SFYESLQ+I+
Sbjct: 251 KELMEVAEDSVAKRVLREHIRESLGVRDEDILFAIINSVSRGKGQDLFLRSFYESLQIIQ 310
Query: 301 EKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYLASIDVL 360
KKL+VPSMHAV+VGSDM+AQTKFETELRN+V +K IQD VHF+NKTLTV+PYLA+IDVL
Sbjct: 311 VKKLKVPSMHAVIVGSDMSAQTKFETELRNYVMQKNIQDRVHFINKTLTVAPYLAAIDVL 370
Query: 361 VQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNI 420
VQNSQARGECFGRITIEAMAFQLPVLGTAAGGT EIVVNGTTGLLH GKEGVTPLA NI
Sbjct: 371 VQNSQARGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHSVGKEGVTPLAKNI 430
Query: 421 VKLATHVERRLTMGKKGYERVKDRFLEHHMSQRIALVLREVLQYAKIHQPQS 472
VKLATHVERRLTMGK+GYERV++ FLEHHM+ RIA VL+EVL+ +K H P S
Sbjct: 431 VKLATHVERRLTMGKRGYERVREMFLEHHMAHRIASVLKEVLRKSKSH-PHS 481
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356564312|ref|XP_003550399.1| PREDICTED: proteasome-activating nucleotidase-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 692 bits (1786), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/468 (78%), Positives = 413/468 (88%), Gaps = 5/468 (1%)
Query: 1 MGKQSSAWITMQKKKRWQLMILVLFTLSTAMLFFIRSTANSCNTSSITTKTTTTATHFNS 60
M K S AW+ M + K L +L L +LST L F+R+T++SC + A +
Sbjct: 1 MVKHSQAWLAM-RSKTCALTLLALLSLSTLTLLFLRTTSDSCTQPQVRN---LDALQPRT 56
Query: 61 DEEKASNPLNFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDE 120
D K NPL FMKSKLVL+VSHELSLSGGPLLLMELAFLLR G++VVWITNQKP +PD+
Sbjct: 57 DS-KLPNPLEFMKSKLVLMVSHELSLSGGPLLLMELAFLLRSAGSDVVWITNQKPPKPDD 115
Query: 121 VIYSLEHKMLDRGVQVLSAKGEKAINTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKV 180
VIY+LE+KMLDRGVQV+ A+GEKA++TA NADLV+LNTAVAGKWLD VLK+KV +VLPKV
Sbjct: 116 VIYTLENKMLDRGVQVVDARGEKAVDTARNADLVILNTAVAGKWLDAVLKEKVLEVLPKV 175
Query: 181 LWWIHEMRGHYFKLEYVKHLPFVAGAMIDSYTTAEYWKNRTRERLGIRMPETYVVHLGNS 240
LWWIHEMRGHYFK+EYVKHLPFVAGAMIDS+TTAEYWKNRTRERLGI+MPETYVVHLGNS
Sbjct: 176 LWWIHEMRGHYFKVEYVKHLPFVAGAMIDSHTTAEYWKNRTRERLGIKMPETYVVHLGNS 235
Query: 241 KDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIR 300
K+LM++AEDSVA+RVLREHVR+SLGVR+DDLLFAIINSVSRGKGQDLFL SFYESL LI+
Sbjct: 236 KELMEVAEDSVAKRVLREHVRQSLGVRNDDLLFAIINSVSRGKGQDLFLRSFYESLMLIQ 295
Query: 301 EKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYLASIDVL 360
EKKLQVPS+HA+VVGSDMNAQTKFETELR FV EKKIQD VHFVNKTL V+PYLASIDVL
Sbjct: 296 EKKLQVPSLHAIVVGSDMNAQTKFETELRQFVMEKKIQDRVHFVNKTLAVAPYLASIDVL 355
Query: 361 VQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNI 420
VQNSQARGECFGRITIEAMAF+LPVLGTAAGGT+EIVVN TTGLLHP GKEGVTPLA NI
Sbjct: 356 VQNSQARGECFGRITIEAMAFRLPVLGTAAGGTVEIVVNRTTGLLHPVGKEGVTPLAKNI 415
Query: 421 VKLATHVERRLTMGKKGYERVKDRFLEHHMSQRIALVLREVLQYAKIH 468
V LATHVERRLTMGKKGYERVK+RFLE HM+QRIALVL+E+LQ+ ++
Sbjct: 416 VNLATHVERRLTMGKKGYERVKERFLEPHMAQRIALVLKELLQHKELE 463
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15222229|ref|NP_177675.1| UDP-glycosyltransferase-like protein [Arabidopsis thaliana] gi|30793985|gb|AAP40442.1| unknown protein [Arabidopsis thaliana] gi|110739259|dbj|BAF01543.1| hypothetical protein [Arabidopsis thaliana] gi|332197597|gb|AEE35718.1| UDP-glycosyltransferase-like protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 688 bits (1776), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/457 (76%), Positives = 403/457 (88%), Gaps = 4/457 (0%)
Query: 10 TMQKKKRWQLMILVLFTLSTAMLFFIRSTANSCNTSSITTKTTTTATHFNSDEEKASNPL 69
TMQ+K RW LM+L+ ++ST + +RS+ +C SI+++ +S + SNPL
Sbjct: 6 TMQRK-RWALMVLLFLSVSTVCMILVRSSFETC---SISSQFVEEKNGESSAAKFQSNPL 61
Query: 70 NFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEHKM 129
+FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGA+VVWITNQKP E DEV+YSLEHKM
Sbjct: 62 DFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGADVVWITNQKPLEDDEVVYSLEHKM 121
Query: 130 LDRGVQVLSAKGEKAINTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRG 189
LDRGVQV+SAKG+KA++T+L ADL+VLNTAVAGKWLD VLK+ V +VLPK+LWWIHEMRG
Sbjct: 122 LDRGVQVISAKGQKAVDTSLKADLIVLNTAVAGKWLDAVLKENVVKVLPKILWWIHEMRG 181
Query: 190 HYFKLEYVKHLPFVAGAMIDSYTTAEYWKNRTRERLGIRMPETYVVHLGNSKDLMDIAED 249
HYF + VKHLPFVAGAMIDS+ TA YWKNRT+ RLGI+MP+TYVVHLGNSK+LM++AED
Sbjct: 182 HYFNADLVKHLPFVAGAMIDSHATAGYWKNRTQARLGIKMPKTYVVHLGNSKELMEVAED 241
Query: 250 SVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSM 309
SVA+RVLREHVRESLGVR++DLLF IINSVSRGKGQDLFL +F+ESL+ I+EKKLQVP+M
Sbjct: 242 SVAKRVLREHVRESLGVRNEDLLFGIINSVSRGKGQDLFLRAFHESLERIKEKKLQVPTM 301
Query: 310 HAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYLASIDVLVQNSQARGE 369
HAVVVGSDM+ QTKFETELRNFV EKK+++ VHFVNKTLTV+PY+A+IDVLVQNSQARGE
Sbjct: 302 HAVVVGSDMSKQTKFETELRNFVREKKLENFVHFVNKTLTVAPYIAAIDVLVQNSQARGE 361
Query: 370 CFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVER 429
CFGRITIEAMAF+LPVLGTAAGGTMEIVVNGTTGLLH GKEGV PLA NIVKLAT VE
Sbjct: 362 CFGRITIEAMAFKLPVLGTAAGGTMEIVVNGTTGLLHSAGKEGVIPLAKNIVKLATQVEL 421
Query: 430 RLTMGKKGYERVKDRFLEHHMSQRIALVLREVLQYAK 466
RL MGK GYERVK+ FLEHHMS RIA VL+EVLQ+AK
Sbjct: 422 RLRMGKNGYERVKEMFLEHHMSHRIASVLKEVLQHAK 458
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297839425|ref|XP_002887594.1| glycosyl transferase family 1 protein [Arabidopsis lyrata subsp. lyrata] gi|297333435|gb|EFH63853.1| glycosyl transferase family 1 protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 688 bits (1775), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/457 (77%), Positives = 399/457 (87%), Gaps = 9/457 (1%)
Query: 10 TMQKKKRWQLMILVLFTLSTAMLFFIRSTANSCNTSSITTKTTTTATHFNSDEEKASNPL 69
TMQKK RW LM+L+ ++ST + +RS+ SC+ ++A F S NPL
Sbjct: 6 TMQKK-RWALMVLLFLSVSTVCVILVRSSFESCSVGG--QFVDSSALRFQS------NPL 56
Query: 70 NFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEHKM 129
FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWITNQKP E DEV+YSLEHKM
Sbjct: 57 AFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWITNQKPLEEDEVVYSLEHKM 116
Query: 130 LDRGVQVLSAKGEKAINTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRG 189
LDRGVQV+SAKG+KA++ AL ADL+VLNTAVAGKWLD VLK+ V +VLPK+LWWIHEMRG
Sbjct: 117 LDRGVQVISAKGQKAVDIALKADLIVLNTAVAGKWLDAVLKENVFKVLPKILWWIHEMRG 176
Query: 190 HYFKLEYVKHLPFVAGAMIDSYTTAEYWKNRTRERLGIRMPETYVVHLGNSKDLMDIAED 249
HYF + VKHLPFVAGAMIDS+ TAEYW+NRT+ RLGI+MP+TYVVHLGNSKDLM++AED
Sbjct: 177 HYFNPDLVKHLPFVAGAMIDSHATAEYWQNRTQARLGIKMPKTYVVHLGNSKDLMEVAED 236
Query: 250 SVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSM 309
SVA+RVLREHVRESLGVR++DLLF IINSVSRGKGQDLFL +F+ESL++I+EKKLQVP+M
Sbjct: 237 SVAKRVLREHVRESLGVRNEDLLFGIINSVSRGKGQDLFLRAFHESLEIIKEKKLQVPTM 296
Query: 310 HAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYLASIDVLVQNSQARGE 369
HAVVVGSDM+ QTKFETELRNFV EKK+++ VHFVNKTLTV+PY+A+IDVLVQNSQARGE
Sbjct: 297 HAVVVGSDMSRQTKFETELRNFVQEKKLENFVHFVNKTLTVAPYIAAIDVLVQNSQARGE 356
Query: 370 CFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVER 429
CFGRITIEAMAF+LPVLGTAAGGTMEIVVNGTTGLLH GKEGV PLA NIVKLA VE
Sbjct: 357 CFGRITIEAMAFKLPVLGTAAGGTMEIVVNGTTGLLHSAGKEGVIPLAKNIVKLAMQVEL 416
Query: 430 RLTMGKKGYERVKDRFLEHHMSQRIALVLREVLQYAK 466
RLTMG GYERVK+ FLEHHMS RIA VL+EVLQ+AK
Sbjct: 417 RLTMGNNGYERVKEMFLEHHMSHRIASVLKEVLQHAK 453
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 474 | ||||||
| TAIR|locus:2018392 | 463 | AT1G75420 [Arabidopsis thalian | 0.955 | 0.978 | 0.728 | 5.9e-176 | |
| TAIR|locus:2013089 | 479 | AT1G19710 [Arabidopsis thalian | 0.991 | 0.981 | 0.715 | 2.9e-174 | |
| TAIR|locus:2093925 | 697 | AT3G15940 [Arabidopsis thalian | 0.303 | 0.206 | 0.424 | 1.7e-37 | |
| TAIR|locus:2018144 | 670 | AT1G52420 [Arabidopsis thalian | 0.303 | 0.214 | 0.390 | 1.1e-34 | |
| TIGR_CMR|CPS_4999 | 367 | CPS_4999 "glycosyl transferase | 0.358 | 0.463 | 0.284 | 1.8e-08 | |
| TIGR_CMR|BA_1558 | 381 | BA_1558 "glycosyl transferase, | 0.286 | 0.356 | 0.304 | 9.4e-08 | |
| TIGR_CMR|CHY_1134 | 378 | CHY_1134 "glycosyl transferase | 0.236 | 0.296 | 0.353 | 1.9e-07 | |
| UNIPROTKB|Q47WI9 | 364 | CPS_4182 "Putative lipopolysac | 0.352 | 0.458 | 0.266 | 3.1e-07 | |
| TIGR_CMR|CPS_4182 | 364 | CPS_4182 "putative lipopolysac | 0.352 | 0.458 | 0.266 | 3.1e-07 | |
| UNIPROTKB|F1NWX1 | 398 | ALG2 "Uncharacterized protein" | 0.748 | 0.891 | 0.238 | 3.7e-07 |
| TAIR|locus:2018392 AT1G75420 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1709 (606.7 bits), Expect = 5.9e-176, P = 5.9e-176
Identities = 333/457 (72%), Positives = 384/457 (84%)
Query: 10 TMQKKKRWQLMILVLFTLSTAMLFFIRSTANSCNXXXXXXXXXXXXXHFNSDEEKASNPL 69
TMQ+K RW LM+L+ ++ST + +RS+ +C+ +S + SNPL
Sbjct: 6 TMQRK-RWALMVLLFLSVSTVCMILVRSSFETCSISSQFVEEKNGE---SSAAKFQSNPL 61
Query: 70 NFMXXXXXXXXXXXXXXXGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEHKM 129
+FM GGPLLLMELAFLLRGVGA+VVWITNQKP E DEV+YSLEHKM
Sbjct: 62 DFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGADVVWITNQKPLEDDEVVYSLEHKM 121
Query: 130 LDRGVQVLSAKGEKAINTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRG 189
LDRGVQV+SAKG+KA++T+L ADL+VLNTAVAGKWLD VLK+ V +VLPK+LWWIHEMRG
Sbjct: 122 LDRGVQVISAKGQKAVDTSLKADLIVLNTAVAGKWLDAVLKENVVKVLPKILWWIHEMRG 181
Query: 190 HYFKLEYVKHLPFVAGAMIDSYTTAEYWKNRTRERLGIRMPETYVVHLGNSKDLMDIAED 249
HYF + VKHLPFVAGAMIDS+ TA YWKNRT+ RLGI+MP+TYVVHLGNSK+LM++AED
Sbjct: 182 HYFNADLVKHLPFVAGAMIDSHATAGYWKNRTQARLGIKMPKTYVVHLGNSKELMEVAED 241
Query: 250 SVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSM 309
SVA+RVLREHVRESLGVR++DLLF IINSVSRGKGQDLFL +F+ESL+ I+EKKLQVP+M
Sbjct: 242 SVAKRVLREHVRESLGVRNEDLLFGIINSVSRGKGQDLFLRAFHESLERIKEKKLQVPTM 301
Query: 310 HAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYLASIDVLVQNSQARGE 369
HAVVVGSDM+ QTKFETELRNFV EKK+++ VHFVNKTLTV+PY+A+IDVLVQNSQARGE
Sbjct: 302 HAVVVGSDMSKQTKFETELRNFVREKKLENFVHFVNKTLTVAPYIAAIDVLVQNSQARGE 361
Query: 370 CFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVER 429
CFGRITIEAMAF+LPVLGTAAGGTMEIVVNGTTGLLH GKEGV PLA NIVKLAT VE
Sbjct: 362 CFGRITIEAMAFKLPVLGTAAGGTMEIVVNGTTGLLHSAGKEGVIPLAKNIVKLATQVEL 421
Query: 430 RLTMGKKGYERVKDRFLEHHMSQRIALVLREVLQYAK 466
RL MGK GYERVK+ FLEHHMS RIA VL+EVLQ+AK
Sbjct: 422 RLRMGKNGYERVKEMFLEHHMSHRIASVLKEVLQHAK 458
|
|
| TAIR|locus:2013089 AT1G19710 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1693 (601.0 bits), Expect = 2.9e-174, P = 2.9e-174
Identities = 344/481 (71%), Positives = 392/481 (81%)
Query: 1 MGKQS-SAWITMQKKKRWQLMILVLFTLSTAMLFFIRSTANSCNXXXXXXXXXXXXXHFN 59
M K S S W T+QKK RW LMIL++ ++ST + +RST +SC+ N
Sbjct: 1 MAKPSTSMWATLQKK-RWPLMILLVLSVSTVGMILVRSTFDSCSVSGKRCSREKED---N 56
Query: 60 SDEEKAS-----NPLNFMXXXXXXXXXXXXXXXGGPLLLMELAFLLRGVGAEVVWITNQK 114
SD + S NPL FM GGPLLLMELAFLLRGV +EVVWITNQK
Sbjct: 57 SDIKIQSVSGSLNPLEFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVESEVVWITNQK 116
Query: 115 PNEPDEVIYSLEHKMLDRGVQVLSAKGEKAINTALNADLVVLNTAVAGKWLDGVLKDKVS 174
P E DEVI LEHKMLDRGVQV+SAK +KAI+TAL +DLVVLNTAVAGKWLD VLKD V
Sbjct: 117 PVEEDEVIKVLEHKMLDRGVQVISAKSQKAIDTALKSDLVVLNTAVAGKWLDAVLKDNVP 176
Query: 175 QVLPKVLWWIHEMRGHYFKLEYVKHLPFVAGAMIDSYTTAEYWKNRTRERLGIRMPETYV 234
+VLPKVLWWIHEMRGHYFK + VKHLPFVAGAMIDS+ TAEYWKNRT +RLGI+MP+TYV
Sbjct: 177 KVLPKVLWWIHEMRGHYFKPDLVKHLPFVAGAMIDSHATAEYWKNRTHDRLGIKMPKTYV 236
Query: 235 VHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYE 294
VHLGNSK+LM++AEDS A+ VLRE VRESLGVR++D+LF IINSVSRGKGQDLFL +F+E
Sbjct: 237 VHLGNSKELMEVAEDSFAKNVLREQVRESLGVRNEDILFGIINSVSRGKGQDLFLRAFHE 296
Query: 295 SLQLIRE-KKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPY 353
SL++I+E KKL+VP+MHAVVVGSDM+AQTKFETELRNFV E K+Q VHFVNKT+ V+PY
Sbjct: 297 SLKVIKETKKLEVPTMHAVVVGSDMSAQTKFETELRNFVQEMKLQKIVHFVNKTMKVAPY 356
Query: 354 LASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGV 413
LA+IDVLVQNSQARGECFGRITIEAMAF+LPVLGTAAGGTMEIVVN TTGLLH TGK+GV
Sbjct: 357 LAAIDVLVQNSQARGECFGRITIEAMAFKLPVLGTAAGGTMEIVVNRTTGLLHNTGKDGV 416
Query: 414 TPLANNIVKLATHVERRLTMGKKGYERVKDRFLEHHMSQRIALVLREVLQYAKIHQPQSH 473
PLA NIVKLAT+V+ R TMGKKGYERVK+ FLEHHMS RIA VLREVLQ+AKIH ++
Sbjct: 417 LPLAKNIVKLATNVKMRNTMGKKGYERVKEMFLEHHMSHRIASVLREVLQHAKIHSRTTN 476
Query: 474 S 474
S
Sbjct: 477 S 477
|
|
| TAIR|locus:2093925 AT3G15940 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 271 (100.5 bits), Expect = 1.7e-37, Sum P(2) = 1.7e-37
Identities = 62/146 (42%), Positives = 88/146 (60%)
Query: 314 VGSDMNAQTKFETELRNFVAEK-KIQDHVHFVNKTLTVSPYLASIDVLVQNSQARGECFG 372
VGS N + + E+ +F++ + + V + T V+ ++ DV V NSQ GE FG
Sbjct: 547 VGSKSN-KVAYVKEMLSFLSNNGNLSNSVLWTPATTRVASLYSAADVYVTNSQGVGETFG 605
Query: 373 RITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLT 432
R+TIEAMA+ LPVLGT AGGT EIV + TGLLHP G+ G LA N++ L + RL
Sbjct: 606 RVTIEAMAYGLPVLGTDAGGTKEIVEHNVTGLLHPVGRAGNKVLAQNLLFLLRNPSTRLQ 665
Query: 433 MGKKGYERVKDRFLEHHMSQRIALVL 458
+G +G E V+ +++ HM +R VL
Sbjct: 666 LGSQGREIVEKMYMKQHMYKRFVDVL 691
|
|
| TAIR|locus:2018144 AT1G52420 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 250 (93.1 bits), Expect = 1.1e-34, Sum P(2) = 1.1e-34
Identities = 57/146 (39%), Positives = 87/146 (59%)
Query: 314 VGSDMNAQTKFETELRNFVAEK-KIQDHVHFVNKTLTVSPYLASIDVLVQNSQARGECFG 372
VGS N + + E+ +F++ + V + T V+ ++ DV V NSQ GE FG
Sbjct: 520 VGSKSN-KVGYVKEMLSFLSNSGNLSKSVMWTPATTRVASLYSAADVYVTNSQGVGETFG 578
Query: 373 RITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLT 432
R+TIEAMA+ L V+GT AGGT E+V + TGLLH G+ G LA+N++ L + + RL
Sbjct: 579 RVTIEAMAYGLAVVGTDAGGTKEMVQHNMTGLLHSMGRSGNKELAHNLLYLLRNPDERLR 638
Query: 433 MGKKGYERVKDRFLEHHMSQRIALVL 458
+G +G + V+ +++ HM +R VL
Sbjct: 639 LGSEGRKMVEKMYMKQHMYKRFVDVL 664
|
|
| TIGR_CMR|CPS_4999 CPS_4999 "glycosyl transferase, group 1 family protein" [Colwellia psychrerythraea 34H (taxid:167879)] | Back alignment and assigned GO terms |
|---|
Score = 157 (60.3 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 53/186 (28%), Positives = 88/186 (47%)
Query: 261 RESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNA 320
R LG+ D L+ I + KG H ++L + + +P++H + G D A
Sbjct: 179 RADLGIPLDQLMLLSIGHLGEIKG-----HQ--DTLVALSKFTKTMPALHLYIAG-DGAA 230
Query: 321 QTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYLASIDVLVQNSQARGECFGRITIEAMA 380
Q K +L V + +I ++V F+ + +L + D+ +Q S E FG + +EA A
Sbjct: 231 QEK--QKLTELVNKLQINENVTFLGQINNAFSWLEACDIFIQPSVE--EAFGLVFVEAGA 286
Query: 381 FQLPVLGTAAGGTMEIVVNGTTGLLH-PTGKEGVTPLANNIVKLATHVERRLTMGKKGYE 439
PV+ T GG EI+V+ TGLL P+ + V + + L R G+ GY+
Sbjct: 287 KAKPVIATTVGGIKEIIVSKETGLLVLPSSPKAVE---HALAILINSPPLRQQYGENGYK 343
Query: 440 RVKDRF 445
R+ + F
Sbjct: 344 RITEHF 349
|
|
| TIGR_CMR|BA_1558 BA_1558 "glycosyl transferase, group 1 family protein" [Bacillus anthracis str. Ames (taxid:198094)] | Back alignment and assigned GO terms |
|---|
Score = 151 (58.2 bits), Expect = 9.4e-08, P = 9.4e-08
Identities = 43/141 (30%), Positives = 72/141 (51%)
Query: 323 KFETELRNFVAEKKIQDHVHFVNKTLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQ 382
+F T L+ V I+D V F+ K V+ LA D+++ S+ E FG + +EAMA
Sbjct: 239 EFCTILQ-LVKNLHIEDRVLFLGKQDNVAELLAMSDLMLLLSEK--ESFGLVLLEAMACG 295
Query: 383 LPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVK 442
+P +GT GG E++ +G TG L G T +A+ ++L E MG++ E V
Sbjct: 296 VPCIGTRVGGIPEVIQHGDTGYLCEVGD--TTGVADQAIQLLKDEELHRNMGERARESVY 353
Query: 443 DRFLEHHMSQRIALVLREVLQ 463
++F + + + +VL+
Sbjct: 354 EQFRSEKIVSQYETIYYDVLR 374
|
|
| TIGR_CMR|CHY_1134 CHY_1134 "glycosyl transferase, group 1 family" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] | Back alignment and assigned GO terms |
|---|
Score = 148 (57.2 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 41/116 (35%), Positives = 60/116 (51%)
Query: 330 NFVAEKKIQDHVHFVNKTLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTA 389
N V +K + + V F+ K VS L+ DVL+ S+ E FG + +EAMA ++PV+
Sbjct: 247 NEVQKKNLTNKVKFLGKMPKVSDVLSISDVLLITSET--ESFGLVALEAMAMEVPVVAYR 304
Query: 390 AGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRF 445
GG E+VV+G TG L + A +VKL + G+ G R K+RF
Sbjct: 305 VGGLPEVVVDGQTGYL--VDYLDLEKAAEAVVKLLKEPWLKRDFGRWGRIRAKERF 358
|
|
| UNIPROTKB|Q47WI9 CPS_4182 "Putative lipopolysaccharide core biosynthesis mannosyltransferase" [Colwellia psychrerythraea 34H (taxid:167879)] | Back alignment and assigned GO terms |
|---|
Score = 146 (56.5 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 49/184 (26%), Positives = 88/184 (47%)
Query: 274 AIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVA 333
AI+ V + KG LF+ S + +++++ P AV+VGS ++ F EL++ +
Sbjct: 185 AILGRVRKQKGVHLFVES---CIDILKDR----PDYTAVIVGSISSSNESFVNELQSKID 237
Query: 334 EKKIQDHVHFVNKT--LTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAG 391
+ + + + F + + +S+ ++V S+ G FG +EAM+ VL + AG
Sbjct: 238 QAGLTERIVFAGEQNFADIPKIFSSLSLVVALSENEG--FGLTILEAMSSGAAVLASEAG 295
Query: 392 GTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRFLEHHMS 451
E+V G G + P + + + L E+ + MG+ G ERV LEH+
Sbjct: 296 AWPEVVRQGVDGYVVPIND--LDAVTEKMSLLLADEEKLMQMGRDGRERV----LEHYSV 349
Query: 452 QRIA 455
+R A
Sbjct: 350 EREA 353
|
|
| TIGR_CMR|CPS_4182 CPS_4182 "putative lipopolysaccharide core biosynthesis mannosyltransferase" [Colwellia psychrerythraea 34H (taxid:167879)] | Back alignment and assigned GO terms |
|---|
Score = 146 (56.5 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 49/184 (26%), Positives = 88/184 (47%)
Query: 274 AIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVA 333
AI+ V + KG LF+ S + +++++ P AV+VGS ++ F EL++ +
Sbjct: 185 AILGRVRKQKGVHLFVES---CIDILKDR----PDYTAVIVGSISSSNESFVNELQSKID 237
Query: 334 EKKIQDHVHFVNKT--LTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAG 391
+ + + + F + + +S+ ++V S+ G FG +EAM+ VL + AG
Sbjct: 238 QAGLTERIVFAGEQNFADIPKIFSSLSLVVALSENEG--FGLTILEAMSSGAAVLASEAG 295
Query: 392 GTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRFLEHHMS 451
E+V G G + P + + + L E+ + MG+ G ERV LEH+
Sbjct: 296 AWPEVVRQGVDGYVVPIND--LDAVTEKMSLLLADEEKLMQMGRDGRERV----LEHYSV 349
Query: 452 QRIA 455
+R A
Sbjct: 350 EREA 353
|
|
| UNIPROTKB|F1NWX1 ALG2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 146 (56.5 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 93/390 (23%), Positives = 161/390 (41%)
Query: 88 GGPLLLMELAFLLRGVGAEV-VWITNQKPNEPDEVIYSLEHKMLDRGV-QVLSAKGEKAI 145
G L+++ A L+ G V VW + P L + + + L +G A+
Sbjct: 12 GAERLVVDAALALQARGCRVQVWTAHYDPGRCFAETRRLALRCAGAWLPRSLWGRGH-AV 70
Query: 146 NTALNADLVVLNTAV-AGKWLDGVLKDKVSQVLP---------KVLWWIHEMRGHYFKLE 195
AL V L + +G+ D + D+VS +P KVL++ H K E
Sbjct: 71 CAALRMAFVALYVLLLSGEHADAFICDQVSACIPILRLARTRKKVLFYCHFPDQLLTKRE 130
Query: 196 -YVKHLPFVAGAMIDSYTT--AEYWKNRTRERLGIRMPETY--VVHLGNSKDLMDIAEDS 250
++K L + ++ YTT A+ ++ + ET+ + H+ N L S
Sbjct: 131 SFLKRLYRMPLDWLEEYTTGMADCIVVNSKFTASV-FKETFKSLSHI-NPDVLYPSLNTS 188
Query: 251 VARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMH 310
V+ + + + + LF IN R K L L + +E R Q +H
Sbjct: 189 SFETVVPVDIADLIP-KKTKFLFLSINRYERKKNLALALEALHELRG--RLDSHQWSEVH 245
Query: 311 AVVVGS-DMNAQTKFE--TELRNFVAEKKIQDHVHFVNKTLTVSPYLASID--VLVQNSQ 365
V+ G D E ELR A+ + DHV F+ ++ T ++ ++ V V +
Sbjct: 246 LVMAGGYDKRVLENVEHYEELRGIAAKLNVSDHVTFL-RSFTDEQKVSLLNNCVCVLYTP 304
Query: 366 ARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLL-HPTGKEGVTPLANNIVKLA 424
+ E FG + +EAM + PV+ +GG +E ++N TG L P T + + K+
Sbjct: 305 SN-EHFGIVPLEAMYMRRPVIAVNSGGPLESILNNVTGFLCDPLP----TQFSEAMEKIV 359
Query: 425 THVERRLTMGKKGYERVKDRFLEHHMSQRI 454
+ +MG G R ++F S+++
Sbjct: 360 RDPLLKDSMGAAGRVRFMEKFSSEAFSEQL 389
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.4.1 | 0.691 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | GSVIVG00014551001 | SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (479 aa) | |||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 474 | |||
| cd03801 | 374 | cd03801, GT1_YqgM_like, This family is most closel | 2e-34 | |
| cd03808 | 359 | cd03808, GT1_cap1E_like, This family is most close | 6e-22 | |
| cd03798 | 377 | cd03798, GT1_wlbH_like, This family is most closel | 1e-20 | |
| COG0438 | 381 | COG0438, RfaG, Glycosyltransferase [Cell envelope | 3e-19 | |
| cd03819 | 355 | cd03819, GT1_WavL_like, This family is most closel | 1e-17 | |
| pfam00534 | 158 | pfam00534, Glycos_transf_1, Glycosyl transferases | 5e-16 | |
| cd03807 | 365 | cd03807, GT1_WbnK_like, This family is most closel | 2e-15 | |
| cd03811 | 353 | cd03811, GT1_WabH_like, This family is most closel | 5e-15 | |
| cd03795 | 357 | cd03795, GT1_like_4, This family is most closely r | 1e-14 | |
| cd04962 | 371 | cd04962, GT1_like_5, This family is most closely r | 4e-14 | |
| cd03805 | 392 | cd03805, GT1_ALG2_like, This family is most closel | 5e-14 | |
| cd03820 | 348 | cd03820, GT1_amsD_like, This family is most closel | 2e-13 | |
| cd03800 | 398 | cd03800, GT1_Sucrose_synthase, This family is most | 3e-13 | |
| TIGR03999 | 374 | TIGR03999, thiol_BshA, N-acetyl-alpha-D-glucosamin | 5e-13 | |
| cd03799 | 355 | cd03799, GT1_amsK_like, This is a family of GT1 gl | 1e-12 | |
| cd05844 | 367 | cd05844, GT1_like_7, Glycosyltransferases catalyze | 2e-11 | |
| cd03814 | 364 | cd03814, GT1_like_2, This family is most closely r | 4e-11 | |
| cd03817 | 374 | cd03817, GT1_UGDG_like, This family is most closel | 5e-11 | |
| cd03822 | 366 | cd03822, GT1_ecORF704_like, This family is most cl | 8e-11 | |
| cd03794 | 394 | cd03794, GT1_wbuB_like, This family is most closel | 2e-10 | |
| cd03813 | 475 | cd03813, GT1_like_3, This family is most closely r | 3e-10 | |
| cd03825 | 365 | cd03825, GT1_wcfI_like, This family is most closel | 4e-10 | |
| TIGR03088 | 374 | TIGR03088, stp2, sugar transferase, PEP-CTERM/EpsH | 9e-10 | |
| cd03823 | 359 | cd03823, GT1_ExpE7_like, This family is most close | 6e-09 | |
| TIGR02149 | 388 | TIGR02149, glgA_Coryne, glycogen synthase, Coryneb | 6e-09 | |
| cd01635 | 229 | cd01635, Glycosyltransferase_GTB_type, Glycosyltra | 7e-09 | |
| cd04951 | 360 | cd04951, GT1_WbdM_like, This family is most closel | 1e-08 | |
| cd03792 | 372 | cd03792, GT1_Trehalose_phosphorylase, Trehalose ph | 4e-08 | |
| PRK15484 | 380 | PRK15484, PRK15484, lipopolysaccharide 1,2-N-acety | 4e-08 | |
| TIGR03449 | 405 | TIGR03449, mycothiol_MshA, D-inositol-3-phosphate | 3e-07 | |
| PLN02871 | 465 | PLN02871, PLN02871, UDP-sulfoquinovose:DAG sulfoqu | 2e-06 | |
| cd04946 | 407 | cd04946, GT1_AmsK_like, This family is most closel | 4e-06 | |
| TIGR04157 | 406 | TIGR04157, glyco_rSAM_CFB, glycosyltransferase, GG | 5e-06 | |
| cd03821 | 375 | cd03821, GT1_Bme6_like, This family is most closel | 2e-05 | |
| cd04949 | 372 | cd04949, GT1_gtfA_like, This family is most closel | 6e-05 | |
| TIGR02470 | 784 | TIGR02470, sucr_synth, sucrose synthase | 9e-05 | |
| pfam13524 | 92 | pfam13524, Glyco_trans_1_2, Glycosyl transferases | 2e-04 | |
| cd03809 | 365 | cd03809, GT1_mtfB_like, This family is most closel | 4e-04 | |
| cd03802 | 335 | cd03802, GT1_AviGT4_like, This family is most clos | 0.001 | |
| PRK15179 | 694 | PRK15179, PRK15179, Vi polysaccharide biosynthesis | 0.002 | |
| TIGR02095 | 473 | TIGR02095, glgA, glycogen/starch synthase, ADP-glu | 0.002 | |
| cd03804 | 351 | cd03804, GT1_wbaZ_like, This family is most closel | 0.003 |
| >gnl|CDD|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Score = 132 bits (334), Expect = 2e-34
Identities = 100/402 (24%), Positives = 155/402 (38%), Gaps = 48/402 (11%)
Query: 77 VLLVSHE--LSLSGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDE--------VIYSLE 126
+LLV+ E S+ G ++ELA L G EV +T PDE V
Sbjct: 2 ILLVTPEYPPSVGGAERHVLELARALAARGHEVTVLTPGDGGLPDEEEVGGIVVVRPPPL 61
Query: 127 HKMLDRGVQVLSAKGEKAINTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHE 186
++ + +L A + + D+V + +A + ++ +H
Sbjct: 62 LRVRRLLLLLLLALRLRRLLRRERFDVVHAHDWLALLAAALAARLLG----IPLVLTVHG 117
Query: 187 MRGHYFKLEYVKHLPF------VAGAMIDSYTT-AEYWKNRTRERLGIRMPETYVVHLGN 239
+ E L A D +E + RE G+ + V+ G
Sbjct: 118 LEFGRPGNELGLLLKLARALERRALRRADRIIAVSEATREELRELGGVPPEKITVIPNG- 176
Query: 240 SKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLI 299
+D A R R LG+ +D+ + + + KG DL L E+L +
Sbjct: 177 ----VDTERFRPAPR----AARRRLGIPEDEPVILFVGRLVPRKGVDLLL----EALAKL 224
Query: 300 REKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTL--TVSPYLASI 357
R++ P + V+VG EL AE + D V F+ + A+
Sbjct: 225 RKE---YPDVRLVIVGDG-----PLREELEALAAELGLGDRVTFLGFVPDEDLPALYAAA 276
Query: 358 DVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLA 417
DV V S E FG + +EAMA LPV+ + GG E+V +G TGLL P G LA
Sbjct: 277 DVFVLPS--LYEGFGLVLLEAMAAGLPVVASDVGGIPEVVEDGETGLLVPPG--DPEALA 332
Query: 418 NNIVKLATHVERRLTMGKKGYERVKDRFLEHHMSQRIALVLR 459
I++L E R +G+ ERV +RF ++ R V
Sbjct: 333 EAILRLLDDPELRRRLGEAARERVAERFSWDRVAARTEEVYY 374
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. Length = 374 |
| >gnl|CDD|99980 cd03808, GT1_cap1E_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 96.5 bits (241), Expect = 6e-22
Identities = 57/232 (24%), Positives = 95/232 (40%), Gaps = 30/232 (12%)
Query: 224 RLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGK 283
+LGI + V+ G+ DL + +DD +F + + + K
Sbjct: 155 KLGIIKKKKTVLIPGSGVDL-------------DRFSPSPEPIPEDDPVFLFVARLLKDK 201
Query: 284 GQDLFLHSFYESLQLIREKKLQVPSMHAVVVGS-DMNAQTKFETELRNFVAEKKIQDHVH 342
G D L E+ ++++ K V ++VG D + + ++ V
Sbjct: 202 GIDELL----EAARILKAKGPNV---RLLLVGDGDEENPAAILE-----IEKLGLEGRVE 249
Query: 343 FVNKTLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTT 402
F+ V LA+ DV V S E R+ +EAMA PV+ T G E V++G
Sbjct: 250 FLGFRDDVPELLAAADVFVLPS--YREGLPRVLLEAMAMGRPVIATDVPGCREAVIDGVN 307
Query: 403 GLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRFLEHHMSQRI 454
G L P G LA+ I +L E R MG+ +R ++ F E + +++
Sbjct: 308 GFLVPPG--DAEALADAIERLIEDPELRARMGQAARKRAEEEFDEEIVVKKL 357
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. Length = 359 |
| >gnl|CDD|99971 cd03798, GT1_wlbH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 92.8 bits (231), Expect = 1e-20
Identities = 61/206 (29%), Positives = 92/206 (44%), Gaps = 26/206 (12%)
Query: 261 RESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNA 320
LG+ +D + + + KG D + E+L + +K+ V H V+VG
Sbjct: 193 ARKLGLPEDKKVILFVGRLVPRKGIDYLI----EALARLLKKRPDV---HLVIVGDG--- 242
Query: 321 QTKFETELRNFVAEKKIQDHVHFVNKTLTVSP-----YLASIDVLVQNSQARGECFGRIT 375
L AE ++D V F+ V Y A+ DV V S E FG +
Sbjct: 243 --PLREALEALAAELGLEDRVTFLGA---VPHEEVPAYYAAADVFVLPS--LREGFGLVL 295
Query: 376 IEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGK 435
+EAMA LPV+ T GG EI+ +G GLL P LA I++L R +G+
Sbjct: 296 LEAMACGLPVVATDVGGIPEIITDGENGLLVP--PGDPEALAEAILRLLADPWLR--LGR 351
Query: 436 KGYERVKDRFLEHHMSQRIALVLREV 461
RV +RF ++++R+ + REV
Sbjct: 352 AARRRVAERFSWENVAERLLELYREV 377
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. Length = 377 |
| >gnl|CDD|223515 COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 88.9 bits (219), Expect = 3e-19
Identities = 79/401 (19%), Positives = 146/401 (36%), Gaps = 35/401 (8%)
Query: 75 KLVLLVSHELSLSGGP---LLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEHKMLD 131
K+++L+ + GG +L + A L G G EV+ I +K + L L
Sbjct: 2 KILILIIYPPPRVGGIERYVLELAKALRLLGRGHEVLVIAPEKLEGLGIEVLRLPSVSLP 61
Query: 132 RGVQVLSAKG---EKAINTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMR 188
+ L + L D++ ++ + L +P V+
Sbjct: 62 LLIVRLRPALLRLLLLLKRLLPYDIIHAHSLLLAPGGLLALLLLKLLGIPLVVTL----- 116
Query: 189 GHYFKLEYVKHLPFVAGAMIDSYTTAEYWKNRTRERLGI----RMPETYVVHLGNSKDLM 244
H + + + K + + + LG ++
Sbjct: 117 -HGLIPRILLLPRLLLLLGLLRLLLKRLKKALRLLADRVIAVSPALKELLEALGVPNKIV 175
Query: 245 DIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKL 304
I + + +L+ + + KG DL + + + + + KL
Sbjct: 176 VIPNGIDTEKFAPARIGLLPEGGKFVVLY--VGRLDPEKGLDLLIEAAAKLKKRGPDIKL 233
Query: 305 QVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVN--KTLTVSPYLASIDVLVQ 362
V+VG + EL + ++D+V F+ ++ LAS DV V
Sbjct: 234 -------VIVGD----GPERREELEKLAKKLGLEDNVKFLGYVPDEELAELLASADVFVL 282
Query: 363 NSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVK 422
S E FG + +EAMA PV+ + GG E+V +G TGLL V LA+ + +
Sbjct: 283 PS--LSEGFGLVLLEAMAAGTPVIASDVGGIPEVVEDGETGLL--VPPGDVEELADALEQ 338
Query: 423 LATHVERRLTMGKKGYERVKDRFLEHHMSQRIALVLREVLQ 463
L E R +G+ ERV++ F +++++ + E+L
Sbjct: 339 LLEDPELREELGEAARERVEEEFSWERIAEQLLELYEELLA 379
|
Length = 381 |
| >gnl|CDD|99989 cd03819, GT1_WavL_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 83.8 bits (208), Expect = 1e-17
Identities = 52/199 (26%), Positives = 81/199 (40%), Gaps = 12/199 (6%)
Query: 252 ARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHA 311
R+L + + + ++R KGQ++F+ E+L +++ P +H
Sbjct: 169 PERILAL--AREWPLPKGKPVILLPGRLTRWKGQEVFI----EALARLKK---DDPDVHL 219
Query: 312 VVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYLASIDVLVQNSQARGECF 371
++VG + + EL + +QD V FV + A D++V S E F
Sbjct: 220 LIVGDA-QGRRFYYAELLELIKRLGLQDRVTFVGHCSDMPAAYALADIVVSAST-EPEAF 277
Query: 372 GRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRL 431
GR +EA A PV+ + GG E V G TGLL P G A + + E R
Sbjct: 278 GRTAVEAQAMGRPVIASDHGGARETVRPGETGLLVPPGDAEALAQALDQILSLL-PEGRA 336
Query: 432 TMGKKGYERVKDRFLEHHM 450
M K V+ F M
Sbjct: 337 KMFAKARMCVETLFSYDRM 355
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. Length = 355 |
| >gnl|CDD|215979 pfam00534, Glycos_transf_1, Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Score = 75.0 bits (185), Expect = 5e-16
Identities = 55/171 (32%), Positives = 80/171 (46%), Gaps = 21/171 (12%)
Query: 275 IINSVSRG---KGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNF 331
II V R KG DL L E+ L++E+ P++ V+VG + E +L+
Sbjct: 4 IILFVGRLVPEKGLDLLL----EAFALLKEQH---PNLKLVIVGDG-----EEEKKLKKL 51
Query: 332 VAEKKIQDHVHFVN--KTLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTA 389
+ ++D+V FV + D+ V S+ G FG + +EAMA +PV+ T
Sbjct: 52 ALKLGLEDNVIFVGFVPDEDLIELYRIADLFVLPSRYEG--FGLVLLEAMAAGVPVIATD 109
Query: 390 AGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYER 440
GG EIV +G TGLL G LA I KL E R +G+ +R
Sbjct: 110 VGGPAEIVKDGETGLLVDPGD--AEALAEAIEKLLKDEELRERLGENARKR 158
|
Mutations in this domain of human PIGA lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family. Length = 158 |
| >gnl|CDD|99979 cd03807, GT1_WbnK_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 77.3 bits (191), Expect = 2e-15
Identities = 73/290 (25%), Positives = 115/290 (39%), Gaps = 37/290 (12%)
Query: 178 PKVLWWIHEMRGH--------YFKLEYVKHLPFVAGAMIDSYTTAEYWKNRTRERLGIRM 229
P V+W I +L + F+ + +S AEY + +G
Sbjct: 105 PPVIWGIRHSDLDLGKKSTRLVARLRRLLS-SFIPLIVANSAAAAEY-----HQAIGY-- 156
Query: 230 PETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFL 289
P +V + N D + D AR LRE LG+ +D L I+ + K L
Sbjct: 157 PPKKIVVIPNGVDTERFSPDLDARARLRE----ELGLPEDTFLIGIVARLHPQKDHATLL 212
Query: 290 HSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLT 349
+ L+ +K P+ ++VG + EL + E ++D V + +
Sbjct: 213 RAA----ALLLKK---FPNARLLLVGDGPDRA---NLELLA-LKELGLEDKVILLGERSD 261
Query: 350 VSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTG 409
V L ++DV V +S E F + +EAMA LPV+ T G E+V + TG L P G
Sbjct: 262 VPALLNALDVFVLSS--LSEGFPNVLLEAMACGLPVVATDVGDNAELVGD--TGFLVPPG 317
Query: 410 KEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRFLEHHMSQRIALVLR 459
LA I L R +G+ ER+++ F M + + R
Sbjct: 318 D--PEALAEAIEALLADPALRQALGEAARERIEENFSIEAMVEAYEELYR 365
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. Length = 365 |
| >gnl|CDD|99982 cd03811, GT1_WabH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 75.8 bits (187), Expect = 5e-15
Identities = 48/169 (28%), Positives = 71/169 (42%), Gaps = 15/169 (8%)
Query: 280 SRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQD 339
S KG D + +F + + +L V++G EL E + D
Sbjct: 199 SPQKGFDTLIRAFALLRKEGPDARL-------VILGDG-----PLREELEALAKELGLAD 246
Query: 340 HVHFVNKTLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVN 399
VHF+ PYL + D+ V +S R E F + +EAMA PV+ T G EI+ +
Sbjct: 247 RVHFLGFQSNPYPYLKAADLFVLSS--RYEGFPNVLLEAMALGTPVVATDCPGPREILED 304
Query: 400 GTTGLLHPTGKEG-VTPLANNIVKLATHVERRLTMGKKGYERVKDRFLE 447
G GLL P G E + A ++ L E R + ERV + +
Sbjct: 305 GENGLLVPVGDEAALAAAALALLDLLLDPELRERLAAAARERVAREYSK 353
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. Length = 353 |
| >gnl|CDD|99969 cd03795, GT1_like_4, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 74.5 bits (184), Expect = 1e-14
Identities = 47/156 (30%), Positives = 67/156 (42%), Gaps = 22/156 (14%)
Query: 305 QVPSMHAVVVGS-DMNAQTKFETELRNFVAEKKIQDHVHFVNKTL--TVSPYLASIDVLV 361
+P V+VG + E EL A + D V F+ + + LA+ DV V
Sbjct: 215 ALPDAPLVIVGEGPL------EAELEALAAALGLLDRVRFLGRLDDEEKAALLAACDVFV 268
Query: 362 QNSQARGECFGRITIEAMAFQLPVLGTA-AGGTMEIVVNGTTGLLHPTGKEGVTP----- 415
S R E FG + +EAMAF PV+ T G + ++G TGL+ V P
Sbjct: 269 FPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNLHGVTGLV-------VPPGDPAA 321
Query: 416 LANNIVKLATHVERRLTMGKKGYERVKDRFLEHHMS 451
LA I +L E R +G+ ER ++ F M
Sbjct: 322 LAEAIRRLLEDPELRERLGEAARERAEEEFTADRMV 357
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes. Length = 357 |
| >gnl|CDD|100002 cd04962, GT1_like_5, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 73.4 bits (181), Expect = 4e-14
Identities = 54/231 (23%), Positives = 86/231 (37%), Gaps = 26/231 (11%)
Query: 215 EYWKNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFA 274
E + T E I V+ N D R E ++ LG + + +
Sbjct: 151 ESLRQETYELFDITKE-IEVIP--NFVDE------DRFRPKPDEALKRRLGAPEGEKVLI 201
Query: 275 IINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAE 334
I++ K D + F + + + + L V G + + E
Sbjct: 202 HISNFRPVKRIDDVIRIFAKVRKEVPARLLLVGD------GPER-------SPAERLARE 248
Query: 335 KKIQDHVHFVNKTLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTM 394
+QD V F+ K V L+ D+ + S+ E FG +EAMA +PV+ + AGG
Sbjct: 249 LGLQDDVLFLGKQDHVEELLSIADLFLLPSEK--ESFGLAALEAMACGVPVVASNAGGIP 306
Query: 395 EIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRF 445
E+V +G TG L G V +A + L E + R +RF
Sbjct: 307 EVVKHGETGFLVDVGD--VEAMAEYALSLLEDDELWQEFSRAARNRAAERF 355
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria, while some of them are also found in Archaea and eukaryotes. Length = 371 |
| >gnl|CDD|99977 cd03805, GT1_ALG2_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 73.0 bits (180), Expect = 5e-14
Identities = 55/196 (28%), Positives = 87/196 (44%), Gaps = 37/196 (18%)
Query: 276 INSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDM-----NAQTKFETELRN 330
IN R K L + +F + E K ++ V+ G N + E EL+
Sbjct: 217 INRFERKKNIALAIEAFAILKDKLAEFK----NVRLVIAGGYDPRVAENVEY-LE-ELQR 270
Query: 331 FVAEKK-IQDHVHFVNKTLTVSPYLASI-----DVLVQNSQA-----RGECFGRITIEAM 379
E ++D V F L SI ++L+ +++A E FG + +EAM
Sbjct: 271 LAEELLLLEDQVIF----------LPSISDSQKELLLSSARALLYTPSNEHFGIVPLEAM 320
Query: 380 AFQLPVLGTAAGGTMEIVVNGTTGLL-HPTGKEGVTPLANNIVKLATHVERRLTMGKKGY 438
PV+ +GG +E VV+G TG L PT +E A ++KLA + MG G
Sbjct: 321 YAGKPVIACNSGGPLETVVDGETGFLCEPTPEE----FAEAMLKLANDPDLADRMGAAGR 376
Query: 439 ERVKDRFLEHHMSQRI 454
+RVK++F ++R+
Sbjct: 377 KRVKEKFSTEAFAERL 392
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. Length = 392 |
| >gnl|CDD|99990 cd03820, GT1_amsD_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 71.1 bits (175), Expect = 2e-13
Identities = 46/162 (28%), Positives = 68/162 (41%), Gaps = 17/162 (10%)
Query: 283 KGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVH 342
KG DL + ++ + + + KL +VG L + E ++D V
Sbjct: 191 KGFDLLIEAWAKIAKKHPDWKL-------RIVGDG-----PEREALEALIKELGLEDRVI 238
Query: 343 FVNKTLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAA-GGTMEIVVNGT 401
+ T + Y A + V S R E F + +EAMAF LPV+ G EI+ +G
Sbjct: 239 LLGFTKNIEEYYAKASIFVLTS--RFEGFPMVLLEAMAFGLPVISFDCPTGPSEIIEDGV 296
Query: 402 TGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKD 443
GLL P G V LA +++L E R MG E +
Sbjct: 297 NGLLVPNGD--VEALAEALLRLMEDEELRKRMGANARESAER 336
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. Length = 348 |
| >gnl|CDD|99973 cd03800, GT1_Sucrose_synthase, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 71.0 bits (175), Expect = 3e-13
Identities = 55/180 (30%), Positives = 75/180 (41%), Gaps = 23/180 (12%)
Query: 275 IINSVSR---GKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFET-ELRN 330
I +V R KG D + ++ E +L L V+VG + + ELR
Sbjct: 222 RILAVGRLDPRKGIDTLIRAYAELPELRERANL-------VIVGGPRDDILAMDEEELRE 274
Query: 331 FVAEKKIQDHVHFVNKTLTVSP-----YLASIDVLVQNSQARGECFGRITIEAMAFQLPV 385
E + D V F VS + DV V A E FG +EAMA LPV
Sbjct: 275 LARELGVIDRVDF---PGRVSREDLPALYRAADVFVN--PALYEPFGLTALEAMACGLPV 329
Query: 386 LGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRF 445
+ TA GG +IVV+G TGLL LA + +L T R + + G R + R+
Sbjct: 330 VATAVGGPRDIVVDGVTGLLVDPRDPEA--LAAALRRLLTDPALRRRLSRAGLRRARARY 387
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. Length = 398 |
| >gnl|CDD|234438 TIGR03999, thiol_BshA, N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA | Back alignment and domain information |
|---|
Score = 69.9 bits (172), Expect = 5e-13
Identities = 38/117 (32%), Positives = 54/117 (46%), Gaps = 4/117 (3%)
Query: 329 RNFVAEKKIQDHVHFVNKTLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGT 388
V E + D V F+ K V+ L+ D+ + S+ E FG +EAMA +PV+ +
Sbjct: 245 EQLVRELGLTDRVLFLGKQDDVAELLSISDLFLLPSEK--ESFGLAALEAMACGVPVIAS 302
Query: 389 AAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRF 445
AGG E+V +G TG L G V +A + L E ER K+RF
Sbjct: 303 NAGGIPEVVEHGVTGFLCDVGD--VETMAEYAISLLEDEELLQRFSAAARERAKERF 357
|
Members of this protein family are BshA, a glycosyltransferase required for bacillithiol biosynthesis. This enzyme combines UDP-GlcNAc and L-malate to form N-acetyl-alpha-D-glucosaminyl L-malate synthase. Bacillithiol is a low-molecular-weight thiol, an analog of glutathione and mycothiol, and is found largely in the Firmicutes [Biosynthesis of cofactors, prosthetic groups, and carriers, Glutathione and analogs]. Length = 374 |
| >gnl|CDD|99972 cd03799, GT1_amsK_like, This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Score = 68.7 bits (169), Expect = 1e-12
Identities = 54/179 (30%), Positives = 79/179 (44%), Gaps = 24/179 (13%)
Query: 283 KGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVH 342
KG D L E+L L++++ + +VG EL +AE ++D V
Sbjct: 192 KGLDYLL----EALALLKDRGIDF---RLDIVGDG-----PLRDELEALIAELGLEDRVT 239
Query: 343 F---VNKTLTVSPYLASIDVLVQNS--QARG--ECFGRITIEAMAFQLPVLGTAAGGTME 395
++ V L + D+ V S A G E + +EAMA LPV+ T G E
Sbjct: 240 LLGAKSQE-EVRELLRAADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIPE 298
Query: 396 IVVNGTTGLLHPTGKEG-VTPLANNIVKLATHVERRLTMGKKGYERVKDRFLEHHMSQR 453
+V +G TGLL P G LA+ I +L E R MG+ G RV++ F + R
Sbjct: 299 LVEDGETGLLVP---PGDPEALADAIERLLDDPELRREMGEAGRARVEEEFDIRKQAAR 354
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. Length = 355 |
| >gnl|CDD|100003 cd05844, GT1_like_7, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Score = 65.0 bits (159), Expect = 2e-11
Identities = 51/176 (28%), Positives = 73/176 (41%), Gaps = 25/176 (14%)
Query: 283 KGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGS-DMNAQTKFETELRNFVAEKKIQDHV 341
KG L L +F +L R +VP + V++G + A L + V
Sbjct: 201 KGPLLLLEAF---ARLAR----RVPEVRLVIIGDGPLLA------ALEALARALGLGGRV 247
Query: 342 HFVNKT--LTVSPYLASIDVLVQNSQ-ARG---ECFGRITIEAMAFQLPVLGTAAGGTME 395
F+ V + + +Q S A E + +EA A +PV+ T GG E
Sbjct: 248 TFLGAQPHAEVRELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPE 307
Query: 396 IVVNGTTGLLHPTGKEG-VTPLANNIVKLATHVERRLTMGKKGYERVKDRF-LEHH 449
V +G TGLL P EG V LA + +L + R MG G RV++RF L
Sbjct: 308 AVEDGETGLLVP---EGDVAALAAALGRLLADPDLRARMGAAGRRRVEERFDLRRQ 360
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 367 |
| >gnl|CDD|99985 cd03814, GT1_like_2, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 63.8 bits (156), Expect = 4e-11
Identities = 33/100 (33%), Positives = 43/100 (43%), Gaps = 4/100 (4%)
Query: 353 YLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEG 412
AS DV V S+ E FG + +EAMA LPV+ AGG +IV +G GLL G
Sbjct: 263 AYASADVFVFPSRT--ETFGLVVLEAMASGLPVVAPDAGGPADIVTDGENGLLVEPGDAE 320
Query: 413 VTPLANNIVKLATHVERRLTMGKKGYERVKDRFLEHHMSQ 452
A + L E R M + + R E +
Sbjct: 321 A--FAAALAALLADPELRRRMAARARAEAERRSWEAFLDN 358
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes. Length = 364 |
| >gnl|CDD|99987 cd03817, GT1_UGDG_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 63.8 bits (156), Expect = 5e-11
Identities = 52/221 (23%), Positives = 88/221 (39%), Gaps = 33/221 (14%)
Query: 248 EDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVP 307
+ V + R LG+ +D+ + + +++ K D + +F L+ + KL
Sbjct: 180 DLDRFEPVDGDDERRKLGIPEDEPVLLYVGRLAKEKNIDFLIRAFARLLKEEPDVKL--- 236
Query: 308 SMHAVVVGS--DMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSP-----YLASIDVL 360
V+VG + EL E + D V F V Y + D+
Sbjct: 237 ----VIVGDGPERE-------ELEELARELGLADRVIFTGF---VPREELPDYYKAADLF 282
Query: 361 VQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNI 420
V S E G + +EAMA LPV+ A G ++V +G G L P G E LA +
Sbjct: 283 VFASTT--ETQGLVLLEAMAAGLPVVAVDAPGLPDLVADGENGFLFPPGDE---ALAEAL 337
Query: 421 VKLATHVERRLTMGKKGYERVKDRFLEHHMSQRIALVLREV 461
++L E R + K E + + ++++ + EV
Sbjct: 338 LRLLQDPELRRRLSKNAEESAE----KFSFAKKVEKLYEEV 374
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. Length = 374 |
| >gnl|CDD|99992 cd03822, GT1_ecORF704_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 63.0 bits (154), Expect = 8e-11
Identities = 42/183 (22%), Positives = 71/183 (38%), Gaps = 25/183 (13%)
Query: 279 VSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQ 338
+ KG +L L E+L L+ + P + +V G ++ E +
Sbjct: 194 LRPYKGLELLL----EALPLLVA---KHPDVRLLVAGETHPDLERYRGEAYALAERLGLA 246
Query: 339 DHVHFVNKTLT---VSPYLASIDVLVQNSQARGECFGRIT----IEAMAFQLPVLGTAAG 391
D V F+N+ L + ++ DV+V ++ + A+ F PV+ T G
Sbjct: 247 DRVIFINRYLPDEELPELFSAADVVVLPYRSAD----QTQSGVLAYAIGFGKPVISTPVG 302
Query: 392 GTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKD----RFLE 447
E V++G TGLL P G LA I +L E + + E + R E
Sbjct: 303 HAEE-VLDGGTGLLVPPG--DPAALAEAIRRLLADPELAQALRARAREYARAMSWERVAE 359
Query: 448 HHM 450
++
Sbjct: 360 RYL 362
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. Length = 366 |
| >gnl|CDD|99968 cd03794, GT1_wbuB_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 61.9 bits (151), Expect = 2e-10
Identities = 38/136 (27%), Positives = 60/136 (44%), Gaps = 12/136 (8%)
Query: 327 ELRNFVAEKKIQDHVHF---VNKTLTVSPYLASIDVLVQNSQARGECFGRIT----IEAM 379
EL+ + D+V F V K + LA+ DV + G F ++ E M
Sbjct: 264 ELKELAKALGL-DNVTFLGRVPKE-ELPELLAAADVGL-VPLKPGPAFEGVSPSKLFEYM 320
Query: 380 AFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYE 439
A PVL + G + E+V GL+ P G LA I++L E R MG+ G
Sbjct: 321 AAGKPVLASVDGESAELVEEAGAGLVVPPGD--PEALAAAILELLDDPEERAEMGENGRR 378
Query: 440 RVKDRFLEHHMSQRIA 455
V+++F +++R+
Sbjct: 379 YVEEKFSREKLAERLL 394
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. Length = 394 |
| >gnl|CDD|99984 cd03813, GT1_like_3, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 61.5 bits (150), Expect = 3e-10
Identities = 65/248 (26%), Positives = 95/248 (38%), Gaps = 40/248 (16%)
Query: 213 TAEYWKNRTRE-RLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDL 271
T Y NR R+ G + V+ G +D + ARR E
Sbjct: 249 TTLYEGNRERQIEDGADPEKIRVIPNG-----IDPERFAPARRARPEKEP---------P 294
Query: 272 LFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNF 331
+ +I V K F+ + ++R+K +P V+G E E R
Sbjct: 295 VVGLIGRVVPIKDIKTFIRAAA----IVRKK---IPDAEGWVIGPTDEDPEYAE-ECREL 346
Query: 332 VAEKKIQDHVHF---VNKTLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGT 388
V ++D+V F N V YL +DVLV S E + +EAMA +PV+ T
Sbjct: 347 VESLGLEDNVKFTGFQN----VKEYLPKLDVLVLTS--ISEGQPLVILEAMAAGIPVVAT 400
Query: 389 AAGGTMEIVVNGTTGLLHPTGKEGVTP------LANNIVKLATHVERRLTMGKKGYERVK 442
G E++ L P G V P LA I++L E R MG+ G +RV+
Sbjct: 401 DVGSCRELIEGADDEALGPAG--EVVPPADPEALARAILRLLKDPELRRAMGEAGRKRVE 458
Query: 443 DRFLEHHM 450
+ M
Sbjct: 459 RYYTLERM 466
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria, while some of them are also found in Archaea and eukaryotes. Length = 475 |
| >gnl|CDD|99994 cd03825, GT1_wcfI_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 60.7 bits (148), Expect = 4e-10
Identities = 48/200 (24%), Positives = 79/200 (39%), Gaps = 23/200 (11%)
Query: 257 REHVRESLGVRDDD--LLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVV 314
+ R+ LG+ D +LF + KG D + E+L+ + E+ + VV
Sbjct: 178 KREARKRLGLPADKKIILFGAVGGTDPRKGFDELI----EALKRLAERWK--DDIELVVF 231
Query: 315 G-SDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYLASIDVLVQNSQARGECFGR 373
G SD + ++ +N +++ ++ DV V S E F
Sbjct: 232 GASDPEIPPDLPFPVH----------YLGSLNDDESLALIYSAADVFVVPSLQ--ENFPN 279
Query: 374 ITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTM 433
IEA+A PV+ GG +IV +G TG L G LA I L + R +
Sbjct: 280 TAIEALACGTPVVAFDVGGIPDIVDHGVTGYLAKPGD--PEDLAEGIEWLLADPDEREEL 337
Query: 434 GKKGYERVKDRFLEHHMSQR 453
G+ E ++ F ++R
Sbjct: 338 GEAARELAENEFDSRVQAKR 357
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. Length = 365 |
| >gnl|CDD|132132 TIGR03088, stp2, sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Score = 60.1 bits (146), Expect = 9e-10
Identities = 61/283 (21%), Positives = 108/283 (38%), Gaps = 24/283 (8%)
Query: 182 WWIHEMRGHYFKLEYVKHL--PFVAGAMIDSYTTAEYWKNRTRERLGIRMPETYVVHLGN 239
+ ++ G +K +++ L P + + S + W +++P + + N
Sbjct: 114 RDVFDLDGSNWKYRWLRRLYRPLIHHYVAVSRDLED-WLRGP-----VKVPPAKIHQIYN 167
Query: 240 SKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLI 299
D E R R + D+ ++ + + K Q + +F L+
Sbjct: 168 GVDT----ERFHPSRGDRSPILPPDFFADESVVVGTVGRLQAVKDQPTLVRAF---ALLV 220
Query: 300 REKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYLASIDV 359
R+ + V+VG D A+ E +R + V + V + ++D+
Sbjct: 221 RQLPEGAERLRLVIVG-DGPARGACEQMVR----AAGLAHLVWLPGERDDVPALMQALDL 275
Query: 360 LVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANN 419
V S A G +EAMA LPV+ TA GG E+V +G TG L P G LA
Sbjct: 276 FVLPSLAEG--ISNTILEAMASGLPVIATAVGGNPELVQHGVTGALVPPGD--AVALARA 331
Query: 420 IVKLATHVERRLTMGKKGYERVKDRFLEHHMSQRIALVLREVL 462
+ + R G G R + +F + M A + ++L
Sbjct: 332 LQPYVSDPAARRAHGAAGRARAEQQFSINAMVAAYAGLYDQLL 374
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. Length = 374 |
| >gnl|CDD|99993 cd03823, GT1_ExpE7_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 57.3 bits (139), Expect = 6e-09
Identities = 31/123 (25%), Positives = 57/123 (46%), Gaps = 16/123 (13%)
Query: 283 KGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVH 342
KG DL L E+ + + +++ V+VG+ + + + + +++
Sbjct: 204 KGVDLLL----EAFKRLPRGDIEL-----VIVGNGLELEEESYEL----EGDPRVEFLGA 250
Query: 343 FVNKTLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTT 402
+ + + + A IDVLV S E F + EA+A +PV+ + GG E+V +G
Sbjct: 251 YPQEE--IDDFYAEIDVLVVPSIW-PENFPLVIREALAAGVPVIASDIGGMAELVRDGVN 307
Query: 403 GLL 405
GLL
Sbjct: 308 GLL 310
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). Length = 359 |
| >gnl|CDD|233748 TIGR02149, glgA_Coryne, glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Score = 57.5 bits (139), Expect = 6e-09
Identities = 43/144 (29%), Positives = 68/144 (47%), Gaps = 10/144 (6%)
Query: 327 ELRNFVAE-KKIQDHVHFVNKTLT---VSPYLASIDVLVQNSQARGECFGRITIEAMAFQ 382
E+R VA + + + ++NK L + L++ +V V S E G + +EAMA
Sbjct: 247 EVRQAVALLDRNRTGIIWINKMLPKEELVELLSNAEVFVCPSIY--EPLGIVNLEAMACG 304
Query: 383 LPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTP----LANNIVKLATHVERRLTMGKKGY 438
PV+ +A GG E+VV+G TG L P LA I L E MG G
Sbjct: 305 TPVVASATGGIPEVVVDGETGFLVPPDNSDADGFQAELAKAINILLADPELAKKMGIAGR 364
Query: 439 ERVKDRFLEHHMSQRIALVLREVL 462
+R ++ F ++++ + R+VL
Sbjct: 365 KRAEEEFSWGSIAKKTVEMYRKVL 388
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 388 |
| >gnl|CDD|99959 cd01635, Glycosyltransferase_GTB_type, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Score = 55.7 bits (134), Expect = 7e-09
Identities = 43/153 (28%), Positives = 66/153 (43%), Gaps = 17/153 (11%)
Query: 256 LREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVG 315
L L + + ++ KG D + +F K + P + V+ G
Sbjct: 90 LEGVPLSLLALSIGLADKVFVGRLAPEKGLDDLIEAF-------ALLKERGPDLKLVIAG 142
Query: 316 SDMNAQTKFETELRNFVAEKKIQDHVHFV---NKTLTVSPYLASIDVLVQNSQARGECFG 372
+ ++ EL +A + D V F+ + ++ LA+ DV V S G FG
Sbjct: 143 DG--PEREYLEEL---LAALLLLDRVIFLGGLDPEELLALLLAAADVFVLPSLREG--FG 195
Query: 373 RITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLL 405
+ +EAMA LPV+ T GG EIV +G TGLL
Sbjct: 196 LVVLEAMACGLPVIATDVGGPPEIVEDGLTGLL 228
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 229 |
| >gnl|CDD|100000 cd04951, GT1_WbdM_like, This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Score = 56.5 bits (137), Expect = 1e-08
Identities = 50/208 (24%), Positives = 84/208 (40%), Gaps = 24/208 (11%)
Query: 239 NSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQL 298
N D +D R +R +LGV++D + + + K L +F + L
Sbjct: 161 NGIDTDRFRKDPARRLKIRN----ALGVKNDTFVILAVGRLVEAKDYPNLLKAFAKLLS- 215
Query: 299 IREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYLASID 358
+ ++ G L + + + V + ++ Y + D
Sbjct: 216 ------DYLDIKLLIAG-----DGPLRATLERLIKALGLSNRVKLLGLRDDIAAYYNAAD 264
Query: 359 VLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLAN 418
+ V +S E FG + EAMA +LPV+ T AGG E+V G +GL+ P LAN
Sbjct: 265 LFVLSS--AWEGFGLVVAEAMACELPVVATDAGGVREVV--GDSGLIVPISD--PEALAN 318
Query: 419 NIVKLATH-VERRLTMGKKGYERVKDRF 445
I ++ E R +G + ER+ +F
Sbjct: 319 KIDEILKMSGEERDIIGARR-ERIVKKF 345
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in bacteria. Length = 360 |
| >gnl|CDD|99966 cd03792, GT1_Trehalose_phosphorylase, Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Score = 54.9 bits (133), Expect = 4e-08
Identities = 29/89 (32%), Positives = 39/89 (43%), Gaps = 6/89 (6%)
Query: 358 DVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLA 417
V++Q S E FG EA+ PV+ GG + +G TG L T +E A
Sbjct: 275 TVVLQKS--IREGFGLTVTEALWKGKPVIAGPVGGIPLQIEDGETGFLVDTVEE----AA 328
Query: 418 NNIVKLATHVERRLTMGKKGYERVKDRFL 446
I+ L E R MG E V++ FL
Sbjct: 329 VRILYLLRDPELRRKMGANAREHVRENFL 357
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. Length = 372 |
| >gnl|CDD|185381 PRK15484, PRK15484, lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Score = 54.8 bits (132), Expect = 4e-08
Identities = 58/251 (23%), Positives = 101/251 (40%), Gaps = 38/251 (15%)
Query: 214 AEYWKNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDD--L 271
+++ K ER +P + + N L + + ++R+ L + D+ L
Sbjct: 147 SQFLKKFYEER----LPNADISIVPNGFCLETYQSN------PQPNLRQQLNISPDETVL 196
Query: 272 LFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNF 331
L+A +S KG L + +F E L ++ VVVG + + +
Sbjct: 197 LYA--GRISPDKGILLLMQAF-EKLATAHS------NLKLVVVGDPTASSKGEKAAYQKK 247
Query: 332 VAE--KKIQDHVHFVNKTLTVSP-----YLASIDVLVQNSQARGECFGRITIEAMAFQLP 384
V E K+I D + P Y D++V SQ E F + +EAMA P
Sbjct: 248 VLEAAKRIGDRCIMLG---GQPPEKMHNYYPLADLVVVPSQVE-EAFCMVAVEAMAAGKP 303
Query: 385 VLGTAAGGTMEIVVNGTTGLLHPTGKEGVTP--LANNIVKLATHVERRLTMGKKGYERVK 442
VL + GG E V+ G TG H E +T + ++I + E + ++ + V
Sbjct: 304 VLASTKGGITEFVLEGITG-YHL--AEPMTSDSIISDINRTLADPE-LTQIAEQAKDFVF 359
Query: 443 DRFLEHHMSQR 453
++ ++QR
Sbjct: 360 SKYSWEGVTQR 370
|
Length = 380 |
| >gnl|CDD|132490 TIGR03449, mycothiol_MshA, D-inositol-3-phosphate glycosyltransferase | Back alignment and domain information |
|---|
Score = 52.4 bits (126), Expect = 3e-07
Identities = 53/188 (28%), Positives = 75/188 (39%), Gaps = 17/188 (9%)
Query: 257 REHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGS 316
R R LG+ D + A + + K D+ L + E L ++ L+V VV G
Sbjct: 206 RATERARLGLPLDTKVVAFVGRIQPLKAPDVLLRAVAELLDRDPDRNLRVI----VVGGP 261
Query: 317 DMNAQTKFETELRNFVAEKKIQDHVHF---VNKTLTVSPYLASIDVLVQNSQARGECFGR 373
+ + L AE I D V F V Y A+ DV+ S E FG
Sbjct: 262 SGSGLATPDA-LIELAAELGIADRVRFLPPRPPEELVHVYRAA-DVVAVPSYN--ESFGL 317
Query: 374 ITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTP--LANNIVKLATHVERRL 431
+ +EA A PV+ GG V +G TGLL +G P A+ + +L R+
Sbjct: 318 VAMEAQACGTPVVAARVGGLPVAVADGETGLL----VDGHDPADWADALARLLDDPRTRI 373
Query: 432 TMGKKGYE 439
MG E
Sbjct: 374 RMGAAAVE 381
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. Length = 405 |
| >gnl|CDD|215469 PLN02871, PLN02871, UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Score = 49.7 bits (119), Expect = 2e-06
Identities = 31/90 (34%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
Query: 355 ASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVN---GTTGLLHPTGKE 411
AS DV V S++ E G + +EAMA +PV+ AGG +I+ G TG L+ G
Sbjct: 330 ASGDVFVMPSES--ETLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEGKTGFLYTPGD- 386
Query: 412 GVTPLANNIVKLATHVERRLTMGKKGYERV 441
V + L E R MG E V
Sbjct: 387 -VDDCVEKLETLLADPELRERMGAAAREEV 415
|
Length = 465 |
| >gnl|CDD|99997 cd04946, GT1_AmsK_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 48.5 bits (116), Expect = 4e-06
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 11/94 (11%)
Query: 356 SIDVLVQNSQARGECFGRITI-EAMAFQLPVLGTAAGGTMEIVVNGTTGLL---HPTGKE 411
+DV V S++ G ++I EAM+F +PV+ T GGT EIV NG GLL PT E
Sbjct: 310 PVDVFVNLSESEGL---PVSIMEAMSFGIPVIATNVGGTPEIVDNGGNGLLLSKDPTPNE 366
Query: 412 GVTPLANNIVKLATHVERRLTMGKKGYERVKDRF 445
L +++ K + E TM +K E+ ++ F
Sbjct: 367 ----LVSSLSKFIDNEEEYQTMREKAREKWEENF 396
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. Length = 407 |
| >gnl|CDD|234487 TIGR04157, glyco_rSAM_CFB, glycosyltransferase, GG-Bacteroidales peptide system | Back alignment and domain information |
|---|
Score = 48.1 bits (115), Expect = 5e-06
Identities = 46/215 (21%), Positives = 87/215 (40%), Gaps = 29/215 (13%)
Query: 254 RVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVV 313
V R+ +R+ LG +D+ + + + KG D + +F ++++ P+ V+
Sbjct: 211 EVERKKLRKKLGFSEDEKIILFVGRLDEIKGVDYLIEAF---KIVLKKD----PNCRLVI 263
Query: 314 VGSDMNAQTKFETELRNFVAEKKIQDHVHF---VNKTLTVSPY-LASIDVLVQNSQARGE 369
VG D + R KKI + F ++K Y +A + VL + E
Sbjct: 264 VG-DGDYS-------RYLQECKKIWSKITFTGKLDKEKLYELYQIADVGVL----PSFHE 311
Query: 370 CFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEG------VTPLANNIVKL 423
+ IE M LP++GT + G E++ +G G P + L ++KL
Sbjct: 312 QCSYVAIEMMMHGLPLIGTTSTGLSEMIEDGLNGYKIPIKEYRDYVELDKKELVQKLLKL 371
Query: 424 ATHVERRLTMGKKGYERVKDRFLEHHMSQRIALVL 458
+ + MGK R +++ M + + +
Sbjct: 372 LSSSDEAKQMGKNARRRYLEKYSLEVMRENMKSLY 406
|
Members of this protein family are predicted glycosyltransferases that occur in conserved gene neighborhoods in various members of the Bacteroidales. These neighborhoods feature a radical SAM enzyme predicted to act in peptide modification (family TIGR04148), peptides from family TIGR04149 with a characteristic GG cleavage motif, and several other proteins. Length = 406 |
| >gnl|CDD|99991 cd03821, GT1_Bme6_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 46.5 bits (111), Expect = 2e-05
Identities = 40/166 (24%), Positives = 67/166 (40%), Gaps = 20/166 (12%)
Query: 283 KGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVH 342
KG DL + +F + + P H V+ G D + + EL+ A ++D V
Sbjct: 216 KGLDLLIEAF-------AKLAERFPDWHLVIAGPD---EGGYRAELKQIAAALGLEDRVT 265
Query: 343 F---VNKTLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVN 399
F + + + D+ V S E FG + EA+A PV+ T E++
Sbjct: 266 FTGMLYGEDKAAALADA-DLFVLPS--HSENFGIVVAEALACGTPVVTTDKVPWQELIEY 322
Query: 400 GTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRF 445
G ++ V LA + + +R MG+ G V++RF
Sbjct: 323 GCGWVVDDD----VDALAAALRRALELPQRLKAMGENGRALVEERF 364
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. Length = 375 |
| >gnl|CDD|99998 cd04949, GT1_gtfA_like, This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Score = 44.9 bits (107), Expect = 6e-05
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 16/129 (12%)
Query: 325 ETELRNFVAEKKIQDHVHFVNKTLTVSPYLASIDVLVQNSQA-----RGECFGRITIEAM 379
E +L+ + E ++D+V Y +D + Q +Q + E FG +EA+
Sbjct: 247 EEKLKELIEELGLEDYVFLKG-------YTRDLDEVYQKAQLSLLTSQSEGFGLSLMEAL 299
Query: 380 AFQLPVLGTAAG-GTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGY 438
+ LPV+ G EI+ +G G L P G + LA I++L + + Y
Sbjct: 300 SHGLPVISYDVNYGPSEIIEDGENGYLVPKGD--IEALAEAIIELLNDPKLLQKFSEAAY 357
Query: 439 ERVKDRFLE 447
E + R+ E
Sbjct: 358 ENAE-RYSE 365
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in bacteria. Length = 372 |
| >gnl|CDD|233881 TIGR02470, sucr_synth, sucrose synthase | Back alignment and domain information |
|---|
Score = 44.7 bits (106), Expect = 9e-05
Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Query: 366 ARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGL-LHPT-GKEGVTPLANNIVKL 423
A E FG +EAM LP T GG +EI+ +G +G + P G+E + + K
Sbjct: 651 ALYEAFGLTVLEAMTCGLPTFATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKC 710
Query: 424 ATHVERRLTMGKKGYERVKDRF 445
+ + G +R+ +++
Sbjct: 711 DEDPSYWQKISQGGLQRIYEKY 732
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 784 |
| >gnl|CDD|222197 pfam13524, Glyco_trans_1_2, Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Score = 39.9 bits (94), Expect = 2e-04
Identities = 22/85 (25%), Positives = 30/85 (35%), Gaps = 7/85 (8%)
Query: 375 TIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMG 434
EA A P+L G E+ G +L+ +E LA + L E R +
Sbjct: 15 VFEAAACGAPLLTDRTPGLEELFEPGEEIVLYRDPEE----LAEKLRYLLADPEERRAIA 70
Query: 435 KKGYERVKDRFLEHHMSQRIALVLR 459
G ERV H R +L
Sbjct: 71 AAGRERVLAE---HTYEHRAEQLLE 92
|
Length = 92 |
| >gnl|CDD|99981 cd03809, GT1_mtfB_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 42.4 bits (100), Expect = 4e-04
Identities = 51/232 (21%), Positives = 80/232 (34%), Gaps = 38/232 (16%)
Query: 218 KNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIIN 277
K LG+ + V+ LG + E +R + L+ +
Sbjct: 152 KRDLLRYLGVPPDKIVVIPLG-------VDPRFRPPPAEAEVLRALYLLPRPYFLY--VG 202
Query: 278 SVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKI 337
++ K + L +F + KL V+VG + LR E +
Sbjct: 203 TIEPRKNLERLLEAFARLPAKGPDPKL-------VIVGKRGWLNEELLARLR----ELGL 251
Query: 338 QDHVHFVNKTLTVS-PYLASIDVLVQNSQA-----RGECFGRITIEAMAFQLPVLGTAAG 391
D V F+ VS LA+ L + ++A E FG +EAMA PV+ +
Sbjct: 252 GDRVRFLGY---VSDEELAA---LYRGARAFVFPSLYEGFGLPVLEAMACGTPVIASNIS 305
Query: 392 GTMEIVVNGTTGLL-HPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVK 442
E+ G L P E LA I +L R + ++G R K
Sbjct: 306 SLPEVA--GDAALYFDPLDPEA---LAAAIERLLEDPALREELRERGLARAK 352
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. Length = 365 |
| >gnl|CDD|99975 cd03802, GT1_AviGT4_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 40.7 bits (96), Expect = 0.001
Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 10/81 (12%)
Query: 369 ECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKL----- 423
E FG + IEAMA PV+ G E+V +G TG L + +E +A +L
Sbjct: 255 EPFGLVMIEAMACGTPVIAFRRGAVPEVVEDGVTGFLVDSVEELAAAVA-RADRLDRAAC 313
Query: 424 ATHVERRLT---MGKKGYERV 441
ERR + M Y +
Sbjct: 314 RRRAERRFSAARMV-DDYLAL 333
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. Length = 335 |
| >gnl|CDD|185101 PRK15179, PRK15179, Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Score = 40.8 bits (95), Expect = 0.002
Identities = 32/132 (24%), Positives = 53/132 (40%), Gaps = 5/132 (3%)
Query: 328 LRNFVAEKKIQDHVHFVNKTLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLG 387
+R F + + + F + V +L + + S R E + IEA +PV+
Sbjct: 563 VREFAQRLGMGERILFTGLSRRVGYWLTQFNAFLLLS--RFEGLPNVLIEAQFSGVPVVT 620
Query: 388 TAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRFLE 447
T AGG E V G TGL P +A + ++ + +K + RF
Sbjct: 621 TLAGGAGEAVQEGVTGLTLPADTVTAPDVAEALARIHDMCAADPGIARKAADWASARF-- 678
Query: 448 HHMSQRIALVLR 459
++Q IA +R
Sbjct: 679 -SLNQMIASTVR 689
|
Length = 694 |
| >gnl|CDD|233724 TIGR02095, glgA, glycogen/starch synthase, ADP-glucose type | Back alignment and domain information |
|---|
Score = 39.9 bits (94), Expect = 0.002
Identities = 48/187 (25%), Positives = 76/187 (40%), Gaps = 31/187 (16%)
Query: 230 PET--YVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDL 287
P T Y+ ++ DL AE+ + L+E + L V DD LF +I+ +++ KG DL
Sbjct: 254 PATDPYLKANYSADDLAGKAEN---KEALQEELG--LPVDDDVPLFGVISRLTQQKGVDL 308
Query: 288 FLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKT 347
L + E L E Q+ VV+G+ + E LR ++ +V
Sbjct: 309 LLAALPELL----ELGGQL-----VVLGT---GDPELEEALREL--AERYPGNVRV---I 351
Query: 348 LTVSPYL-----ASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTT 402
+ L A D ++ S R E G + AM + + GG + VV+G
Sbjct: 352 IGYDEALAHLIYAGADFILMPS--RFEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDP 409
Query: 403 GLLHPTG 409
TG
Sbjct: 410 EAESGTG 416
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 473 |
| >gnl|CDD|99976 cd03804, GT1_wbaZ_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 39.4 bits (93), Expect = 0.003
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 369 ECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLL 405
E FG + +EAMA PV+ GG +E V++G TG+L
Sbjct: 271 EDFGIVPVEAMASGTPVIAYGKGGALETVIDGVTGIL 307
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. Length = 351 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 474 | |||
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system ass | 100.0 | |
| PLN02316 | 1036 | synthase/transferase | 100.0 | |
| PRK14099 | 485 | glycogen synthase; Provisional | 100.0 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 100.0 | |
| PLN02871 | 465 | UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | 100.0 | |
| PRK00654 | 466 | glgA glycogen synthase; Provisional | 100.0 | |
| PRK15427 | 406 | colanic acid biosynthesis glycosyltransferase WcaL | 100.0 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to | 100.0 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related | 100.0 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 100.0 | |
| TIGR02472 | 439 | sucr_P_syn_N sucrose-phosphate synthase, putative, | 100.0 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 100.0 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino | 100.0 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylas | 100.0 | |
| PRK15490 | 578 | Vi polysaccharide biosynthesis protein TviE; Provi | 100.0 | |
| TIGR02095 | 473 | glgA glycogen/starch synthases, ADP-glucose type. | 100.0 | |
| cd04951 | 360 | GT1_WbdM_like This family is most closely related | 100.0 | |
| TIGR02149 | 388 | glgA_Coryne glycogen synthase, Corynebacterium fam | 100.0 | |
| PRK14098 | 489 | glycogen synthase; Provisional | 100.0 | |
| PRK15484 | 380 | lipopolysaccharide 1,2-N-acetylglucosaminetransfer | 100.0 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 100.0 | |
| cd03805 | 392 | GT1_ALG2_like This family is most closely related | 100.0 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related | 100.0 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related | 100.0 | |
| TIGR02470 | 784 | sucr_synth sucrose synthase. This model represents | 100.0 | |
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is mo | 100.0 | |
| PRK09922 | 359 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D | 100.0 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 100.0 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related | 100.0 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related | 100.0 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the trans | 100.0 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely r | 100.0 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely relate | 100.0 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely rela | 100.0 | |
| PLN02949 | 463 | transferase, transferring glycosyl groups | 100.0 | |
| PRK10125 | 405 | putative glycosyl transferase; Provisional | 100.0 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltran | 100.0 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to | 100.0 | |
| PLN02846 | 462 | digalactosyldiacylglycerol synthase | 100.0 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related | 100.0 | |
| KOG1111 | 426 | consensus N-acetylglucosaminyltransferase complex, | 100.0 | |
| PLN00142 | 815 | sucrose synthase | 100.0 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related | 100.0 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to | 100.0 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to | 100.0 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related | 100.0 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related | 100.0 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related | 100.0 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to | 100.0 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related | 100.0 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related | 100.0 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related | 100.0 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related | 100.0 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related | 100.0 | |
| TIGR03087 | 397 | stp1 sugar transferase, PEP-CTERM/EpsH1 system ass | 100.0 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related | 100.0 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related | 100.0 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related | 100.0 | |
| PLN02501 | 794 | digalactosyldiacylglycerol synthase | 100.0 | |
| TIGR02918 | 500 | accessory Sec system glycosylation protein GtfA. M | 100.0 | |
| KOG0853 | 495 | consensus Glycosyltransferase [Cell wall/membrane/ | 100.0 | |
| PHA01630 | 331 | putative group 1 glycosyl transferase | 100.0 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related | 100.0 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related | 100.0 | |
| PHA01633 | 335 | putative glycosyl transferase group 1 | 100.0 | |
| PLN02275 | 371 | transferase, transferring glycosyl groups | 99.98 | |
| COG0297 | 487 | GlgA Glycogen synthase [Carbohydrate transport and | 99.97 | |
| PRK00726 | 357 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.97 | |
| PRK05749 | 425 | 3-deoxy-D-manno-octulosonic-acid transferase; Revi | 99.96 | |
| PRK13609 | 380 | diacylglycerol glucosyltransferase; Provisional | 99.96 | |
| cd03785 | 350 | GT1_MurG MurG is an N-acetylglucosaminyltransferas | 99.96 | |
| cd03788 | 460 | GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a | 99.96 | |
| cd03793 | 590 | GT1_Glycogen_synthase_GSY2_like Glycogen synthase, | 99.96 | |
| TIGR02400 | 456 | trehalose_OtsA alpha,alpha-trehalose-phosphate syn | 99.96 | |
| TIGR01133 | 348 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.96 | |
| PF00534 | 172 | Glycos_transf_1: Glycosyl transferases group 1; In | 99.95 | |
| PLN02605 | 382 | monogalactosyldiacylglycerol synthase | 99.95 | |
| PRK13608 | 391 | diacylglycerol glucosyltransferase; Provisional | 99.95 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 99.94 | |
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases | 99.92 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 99.92 | |
| cd04950 | 373 | GT1_like_1 Glycosyltransferases catalyze the trans | 99.92 | |
| KOG1387 | 465 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.91 | |
| PRK00025 | 380 | lpxB lipid-A-disaccharide synthase; Reviewed | 99.89 | |
| TIGR02398 | 487 | gluc_glyc_Psyn glucosylglycerol-phosphate synthase | 99.89 | |
| COG0438 | 381 | RfaG Glycosyltransferase [Cell envelope biogenesis | 99.88 | |
| TIGR00236 | 365 | wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras | 99.88 | |
| cd03786 | 363 | GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th | 99.86 | |
| PRK09814 | 333 | beta-1,6-galactofuranosyltransferase; Provisional | 99.86 | |
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 99.82 | |
| TIGR02094 | 601 | more_P_ylases alpha-glucan phosphorylases. This fa | 99.81 | |
| KOG2941 | 444 | consensus Beta-1,4-mannosyltransferase [Posttransl | 99.79 | |
| TIGR03713 | 519 | acc_sec_asp1 accessory Sec system protein Asp1. Th | 99.79 | |
| PF13692 | 135 | Glyco_trans_1_4: Glycosyl transferases group 1; PD | 99.77 | |
| TIGR00215 | 385 | lpxB lipid-A-disaccharide synthase. Lipid-A precur | 99.76 | |
| cd04299 | 778 | GT1_Glycogen_Phosphorylase_like This family is mos | 99.69 | |
| PRK12446 | 352 | undecaprenyldiphospho-muramoylpentapeptide beta-N- | 99.58 | |
| PF00982 | 474 | Glyco_transf_20: Glycosyltransferase family 20; In | 99.58 | |
| COG0707 | 357 | MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami | 99.57 | |
| PF05693 | 633 | Glycogen_syn: Glycogen synthase; InterPro: IPR0086 | 99.57 | |
| PF13524 | 92 | Glyco_trans_1_2: Glycosyl transferases group 1 | 99.56 | |
| PRK10117 | 474 | trehalose-6-phosphate synthase; Provisional | 99.55 | |
| TIGR02919 | 438 | accessory Sec system glycosyltransferase GtfB. Mem | 99.49 | |
| PF13439 | 177 | Glyco_transf_4: Glycosyltransferase Family 4; PDB: | 99.49 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 99.44 | |
| COG0380 | 486 | OtsA Trehalose-6-phosphate synthase [Carbohydrate | 99.39 | |
| TIGR03492 | 396 | conserved hypothetical protein. This protein famil | 99.35 | |
| COG3914 | 620 | Spy Predicted O-linked N-acetylglucosamine transfe | 99.34 | |
| TIGR03590 | 279 | PseG pseudaminic acid biosynthesis-associated prot | 99.33 | |
| COG1519 | 419 | KdtA 3-deoxy-D-manno-octulosonic-acid transferase | 99.26 | |
| TIGR03568 | 365 | NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, | 99.22 | |
| PF04007 | 335 | DUF354: Protein of unknown function (DUF354); Inte | 99.21 | |
| cd03784 | 401 | GT1_Gtf_like This family includes the Gtfs, a grou | 99.2 | |
| PF13844 | 468 | Glyco_transf_41: Glycosyl transferase family 41; P | 99.19 | |
| PF13528 | 318 | Glyco_trans_1_3: Glycosyl transferase family 1 | 99.17 | |
| COG0763 | 381 | LpxB Lipid A disaccharide synthetase [Cell envelop | 99.13 | |
| PF02684 | 373 | LpxB: Lipid-A-disaccharide synthetase; InterPro: I | 99.08 | |
| COG0381 | 383 | WecB UDP-N-acetylglucosamine 2-epimerase [Cell env | 99.05 | |
| PF13579 | 160 | Glyco_trans_4_4: Glycosyl transferase 4-like domai | 99.01 | |
| TIGR00661 | 321 | MJ1255 conserved hypothetical protein. This model | 98.84 | |
| PRK01021 | 608 | lpxB lipid-A-disaccharide synthase; Reviewed | 98.8 | |
| COG4641 | 373 | Uncharacterized protein conserved in bacteria [Fun | 98.73 | |
| COG3980 | 318 | spsG Spore coat polysaccharide biosynthesis protei | 98.65 | |
| PF09314 | 185 | DUF1972: Domain of unknown function (DUF1972); Int | 98.65 | |
| PF04464 | 369 | Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate | 98.6 | |
| TIGR01426 | 392 | MGT glycosyltransferase, MGT family. This model de | 98.55 | |
| PRK14089 | 347 | ipid-A-disaccharide synthase; Provisional | 98.54 | |
| COG1819 | 406 | Glycosyl transferases, related to UDP-glucuronosyl | 98.53 | |
| PRK02797 | 322 | 4-alpha-L-fucosyltransferase; Provisional | 98.47 | |
| PF02350 | 346 | Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; | 98.43 | |
| COG1817 | 346 | Uncharacterized protein conserved in archaea [Func | 98.41 | |
| PF13477 | 139 | Glyco_trans_4_2: Glycosyl transferase 4-like | 98.31 | |
| KOG3742 | 692 | consensus Glycogen synthase [Carbohydrate transpor | 98.31 | |
| PRK10017 | 426 | colanic acid biosynthesis protein; Provisional | 98.29 | |
| PF07429 | 360 | Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc | 98.26 | |
| COG0058 | 750 | GlgP Glucan phosphorylase [Carbohydrate transport | 98.21 | |
| COG4671 | 400 | Predicted glycosyl transferase [General function p | 98.19 | |
| KOG4626 | 966 | consensus O-linked N-acetylglucosamine transferase | 98.13 | |
| PF04101 | 167 | Glyco_tran_28_C: Glycosyltransferase family 28 C-t | 97.98 | |
| PRK14986 | 815 | glycogen phosphorylase; Provisional | 97.94 | |
| PF08323 | 245 | Glyco_transf_5: Starch synthase catalytic domain; | 97.93 | |
| PHA03392 | 507 | egt ecdysteroid UDP-glucosyltransferase; Provision | 97.89 | |
| PF00343 | 713 | Phosphorylase: Carbohydrate phosphorylase; InterPr | 97.82 | |
| TIGR02093 | 794 | P_ylase glycogen/starch/alpha-glucan phosphorylase | 97.71 | |
| PRK14985 | 798 | maltodextrin phosphorylase; Provisional | 97.66 | |
| cd04300 | 797 | GT1_Glycogen_Phosphorylase This is a family of oli | 97.63 | |
| COG0859 | 334 | RfaF ADP-heptose:LPS heptosyltransferase [Cell env | 97.34 | |
| KOG1050 | 732 | consensus Trehalose-6-phosphate synthase component | 97.12 | |
| cd03789 | 279 | GT1_LPS_heptosyltransferase Lipopolysaccharide hep | 97.07 | |
| PRK10422 | 352 | lipopolysaccharide core biosynthesis protein; Prov | 97.04 | |
| TIGR02195 | 334 | heptsyl_trn_II lipopolysaccharide heptosyltransfer | 97.04 | |
| PRK10916 | 348 | ADP-heptose:LPS heptosyltransferase II; Provisiona | 96.94 | |
| PF00201 | 500 | UDPGT: UDP-glucoronosyl and UDP-glucosyl transfera | 96.82 | |
| TIGR02193 | 319 | heptsyl_trn_I lipopolysaccharide heptosyltransfera | 96.81 | |
| PRK10964 | 322 | ADP-heptose:LPS heptosyl transferase I; Provisiona | 96.78 | |
| PLN02448 | 459 | UDP-glycosyltransferase family protein | 96.77 | |
| PLN02670 | 472 | transferase, transferring glycosyl groups | 96.74 | |
| PF11440 | 355 | AGT: DNA alpha-glucosyltransferase; InterPro: IPR0 | 96.64 | |
| TIGR03609 | 298 | S_layer_CsaB polysaccharide pyruvyl transferase Cs | 96.58 | |
| PLN03007 | 482 | UDP-glucosyltransferase family protein | 96.56 | |
| PLN02410 | 451 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 96.51 | |
| PLN02562 | 448 | UDP-glycosyltransferase | 96.37 | |
| PLN03004 | 451 | UDP-glycosyltransferase | 96.11 | |
| PF15024 | 559 | Glyco_transf_18: Glycosyltransferase family 18 | 95.92 | |
| PLN02863 | 477 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 95.82 | |
| PLN02167 | 475 | UDP-glycosyltransferase family protein | 95.76 | |
| COG3660 | 329 | Predicted nucleoside-diphosphate-sugar epimerase [ | 95.72 | |
| COG2327 | 385 | WcaK Polysaccharide pyruvyl transferase family pro | 95.62 | |
| PLN02555 | 480 | limonoid glucosyltransferase | 95.49 | |
| PF12038 | 168 | DUF3524: Domain of unknown function (DUF3524); Int | 95.47 | |
| PLN02152 | 455 | indole-3-acetate beta-glucosyltransferase | 95.45 | |
| PLN02210 | 456 | UDP-glucosyl transferase | 95.44 | |
| PLN02173 | 449 | UDP-glucosyl transferase family protein | 95.27 | |
| PLN00414 | 446 | glycosyltransferase family protein | 95.25 | |
| PF01075 | 247 | Glyco_transf_9: Glycosyltransferase family 9 (hept | 95.21 | |
| PLN02208 | 442 | glycosyltransferase family protein | 95.16 | |
| PLN02764 | 453 | glycosyltransferase family protein | 95.02 | |
| PF12000 | 171 | Glyco_trans_4_3: Gkycosyl transferase family 4 gro | 95.0 | |
| PF05159 | 269 | Capsule_synth: Capsule polysaccharide biosynthesis | 95.0 | |
| PF04230 | 286 | PS_pyruv_trans: Polysaccharide pyruvyl transferase | 94.93 | |
| PLN02992 | 481 | coniferyl-alcohol glucosyltransferase | 94.78 | |
| PLN02554 | 481 | UDP-glycosyltransferase family protein | 94.69 | |
| PF06258 | 311 | Mito_fiss_Elm1: Mitochondrial fission ELM1; InterP | 94.65 | |
| PLN00164 | 480 | glucosyltransferase; Provisional | 93.92 | |
| PLN02207 | 468 | UDP-glycosyltransferase | 93.75 | |
| PLN02534 | 491 | UDP-glycosyltransferase | 93.57 | |
| PF01975 | 196 | SurE: Survival protein SurE; InterPro: IPR002828 T | 93.24 | |
| PF10087 | 97 | DUF2325: Uncharacterized protein conserved in bact | 93.02 | |
| TIGR02201 | 344 | heptsyl_trn_III lipopolysaccharide heptosyltransfe | 92.36 | |
| KOG1192 | 496 | consensus UDP-glucuronosyl and UDP-glucosyl transf | 92.3 | |
| KOG3349 | 170 | consensus Predicted glycosyltransferase [General f | 90.98 | |
| PRK09739 | 199 | hypothetical protein; Provisional | 90.4 | |
| PF06925 | 169 | MGDG_synth: Monogalactosyldiacylglycerol (MGDG) sy | 90.39 | |
| COG0496 | 252 | SurE Predicted acid phosphatase [General function | 88.96 | |
| KOG1021 | 464 | consensus Acetylglucosaminyltransferase EXT1/exost | 88.84 | |
| PLN03015 | 470 | UDP-glucosyl transferase | 88.56 | |
| COG1887 | 388 | TagB Putative glycosyl/glycerophosphate transferas | 88.53 | |
| PF00862 | 550 | Sucrose_synth: Sucrose synthase; InterPro: IPR0003 | 87.56 | |
| TIGR02026 | 497 | BchE magnesium-protoporphyrin IX monomethyl ester | 87.49 | |
| PF03016 | 302 | Exostosin: Exostosin family; InterPro: IPR004263 H | 87.32 | |
| PF08288 | 90 | PIGA: PIGA (GPI anchor biosynthesis); InterPro: IP | 84.8 | |
| PF01113 | 124 | DapB_N: Dihydrodipicolinate reductase, N-terminus; | 83.01 | |
| cd03146 | 212 | GAT1_Peptidase_E Type 1 glutamine amidotransferase | 82.77 | |
| PF03853 | 169 | YjeF_N: YjeF-related protein N-terminus; InterPro: | 82.34 | |
| PRK13940 | 414 | glutamyl-tRNA reductase; Provisional | 81.23 | |
| PRK06988 | 312 | putative formyltransferase; Provisional | 80.15 |
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-45 Score=356.71 Aligned_cols=355 Identities=18% Similarity=0.200 Sum_probs=266.2
Q ss_pred CEEEEEecCCCCCChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhcccchhccceeeee-----------hhcHH
Q 011954 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEHKMLDRGVQVLS-----------AKGEK 143 (474)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~ 143 (474)
.||+++.+.+..||+++++.+|+++|.+.|+++.+++...... +...+...++.++. ...+.
T Consensus 2 ~~il~ii~~~~~GG~e~~~~~l~~~l~~~~~~~~v~~~~~~~~-------~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~ 74 (374)
T TIGR03088 2 PLIVHVVYRFDVGGLENGLVNLINHLPADRYRHAVVALTEVSA-------FRKRIQRPDVAFYALHKQPGKDVAVYPQLY 74 (374)
T ss_pred ceEEEEeCCCCCCcHHHHHHHHHhhccccccceEEEEcCCCCh-------hHHHHHhcCceEEEeCCCCCCChHHHHHHH
Confidence 5799999999999999999999999999999998888543221 11222222332221 22344
Q ss_pred HHhhhcCCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccccc-----hhhhh-hc-ccccccccccccccHHH
Q 011954 144 AINTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYF-----KLEYV-KH-LPFVAGAMIDSYTTAEY 216 (474)
Q Consensus 144 ~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~-----~~~~~-~~-~~~~~~~~~~s~~~~~~ 216 (474)
.+.+..+||+||+|+............... +..+++.|....... ...+. +. .+..+.+++.|. .
T Consensus 75 ~~l~~~~~Divh~~~~~~~~~~~~~~~~~~----~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vs~----~ 146 (374)
T TIGR03088 75 RLLRQLRPDIVHTRNLAALEAQLPAALAGV----PARIHGEHGRDVFDLDGSNWKYRWLRRLYRPLIHHYVAVSR----D 146 (374)
T ss_pred HHHHHhCCCEEEEcchhHHHHHHHHHhcCC----CeEEEeecCcccccchhhHHHHHHHHHHHHhcCCeEEEeCH----H
Confidence 556678999999997533221111111111 123344443211110 00111 11 123344444444 4
Q ss_pred HHHhHHHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHHHHHHHHHHH
Q 011954 217 WKNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESL 296 (474)
Q Consensus 217 ~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~ 296 (474)
..+.+.+.++++..++.+||||+|.+.|.+.... +...++....++++++++++||+.+.||++.+++|+.++.
T Consensus 147 ~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~ 220 (374)
T TIGR03088 147 LEDWLRGPVKVPPAKIHQIYNGVDTERFHPSRGD------RSPILPPDFFADESVVVGTVGRLQAVKDQPTLVRAFALLV 220 (374)
T ss_pred HHHHHHHhcCCChhhEEEeccCccccccCCCccc------hhhhhHhhcCCCCCeEEEEEecCCcccCHHHHHHHHHHHH
Confidence 4444555677888899999999999888654321 1222333334567889999999999999999999999887
Q ss_pred HHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCCCChHHHHhcCCEEEEcCCCCCCCCchHHH
Q 011954 297 QLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYLASIDVLVQNSQARGECFGRITI 376 (474)
Q Consensus 297 ~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv~v~ps~~~~E~~~~~~~ 376 (474)
+...+ ..++++|+++|+|+ ..+.+++.++++++.+++.|+|+.+++.++|+.||++|+||. .||||++++
T Consensus 221 ~~~~~---~~~~~~l~i~G~g~-----~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~adi~v~pS~--~Eg~~~~~l 290 (374)
T TIGR03088 221 RQLPE---GAERLRLVIVGDGP-----ARGACEQMVRAAGLAHLVWLPGERDDVPALMQALDLFVLPSL--AEGISNTIL 290 (374)
T ss_pred HhCcc---cccceEEEEecCCc-----hHHHHHHHHHHcCCcceEEEcCCcCCHHHHHHhcCEEEeccc--cccCchHHH
Confidence 64321 12479999999986 678899999999999999999999999999999999999998 899999999
Q ss_pred HHHhcCCCEEEcCCCCcceeeeeCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Q 011954 377 EAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRFLEHHMSQRIAL 456 (474)
Q Consensus 377 EAma~G~PvI~s~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~ 456 (474)
|||+||+|||+|+.||..|++.++.+|++++++| +++++++|.+++++++.+.++++++++++.++|||+.++++|++
T Consensus 291 EAma~G~Pvv~s~~~g~~e~i~~~~~g~~~~~~d--~~~la~~i~~l~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~ 368 (374)
T TIGR03088 291 EAMASGLPVIATAVGGNPELVQHGVTGALVPPGD--AVALARALQPYVSDPAARRAHGAAGRARAEQQFSINAMVAAYAG 368 (374)
T ss_pred HHHHcCCCEEEcCCCCcHHHhcCCCceEEeCCCC--HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 9999999999999999999999999999999988 99999999999999999999999999999999999999999999
Q ss_pred HHHHHH
Q 011954 457 VLREVL 462 (474)
Q Consensus 457 ~~~~~~ 462 (474)
+|++++
T Consensus 369 ~y~~~~ 374 (374)
T TIGR03088 369 LYDQLL 374 (374)
T ss_pred HHHHhC
Confidence 998863
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-44 Score=366.39 Aligned_cols=388 Identities=14% Similarity=0.123 Sum_probs=279.8
Q ss_pred ccccccccCCCCcccCCCcccccccCEEEEEecCCCC----CChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhc
Q 011954 50 KTTTTATHFNSDEEKASNPLNFMKSKLVLLVSHELSL----SGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSL 125 (474)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~kIl~v~~~~~~----gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~ 125 (474)
.+.+.+.+.......+... ..+|||++|+.+..| ||...++..|+++|++.||+|.|+++.++.........+
T Consensus 566 yDn~~~~dyh~~v~g~~~~---~~pM~Il~VSsE~~P~aKvGGLgDVV~sLp~ALa~~Gh~V~VitP~Y~~i~~~~~~~~ 642 (1036)
T PLN02316 566 FDNRNGLDYHIPVFGGIAK---EPPMHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQDLNHNVDIILPKYDCLNLSHVKDL 642 (1036)
T ss_pred cCCCCCcCCcccccCCCCC---CCCcEEEEEEcccCCCCCcCcHHHHHHHHHHHHHHcCCEEEEEecCCcccchhhcccc
Confidence 3444444444443332222 236999999988655 888999999999999999999999987654211100000
Q ss_pred cc--c------------hhccceeeeehh-------------------c-------HHHHh--hhcCCCEEEEcccchhh
Q 011954 126 EH--K------------MLDRGVQVLSAK-------------------G-------EKAIN--TALNADLVVLNTAVAGK 163 (474)
Q Consensus 126 ~~--~------------~~~~~~~~~~~~-------------------~-------~~~~~--~~~~~DiV~~~~~~~~~ 163 (474)
.. . ....|+.++... + ...+. ...+|||||+|+..++.
T Consensus 643 ~~~~~~~~~~~~~~v~~~~~~GV~vyfl~~~~~~F~r~~~Yg~~Dd~~RF~~F~~Aale~l~~~~~~PDIIHaHDW~tal 722 (1036)
T PLN02316 643 HYQRSYSWGGTEIKVWFGKVEGLSVYFLEPQNGMFWAGCVYGCRNDGERFGFFCHAALEFLLQSGFHPDIIHCHDWSSAP 722 (1036)
T ss_pred eEEEEeccCCEEEEEEEEEECCcEEEEEeccccccCCCCCCCchhHHHHHHHHHHHHHHHHHhcCCCCCEEEECCChHHH
Confidence 00 0 000122221100 0 00111 12589999999865544
Q ss_pred HHhHHhhhcc---cccccceeeeeeccccccchhhhhhcccccccccccccccHHHHHHhHHHHhcCC--CCCeEEEeCC
Q 011954 164 WLDGVLKDKV---SQVLPKVLWWIHEMRGHYFKLEYVKHLPFVAGAMIDSYTTAEYWKNRTRERLGIR--MPETYVVHLG 238 (474)
Q Consensus 164 ~~~~~~~~~~---~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~--~~ki~vi~ng 238 (474)
... +++... .....+++.++|+... ........+...+.++++|....+.+.. ...+. ..++.+|+||
T Consensus 723 va~-llk~~~~~~~~~~~p~V~TiHnl~~--~~n~lk~~l~~AD~ViTVS~tya~EI~~----~~~l~~~~~Kl~vI~NG 795 (1036)
T PLN02316 723 VAW-LFKDHYAHYGLSKARVVFTIHNLEF--GANHIGKAMAYADKATTVSPTYSREVSG----NSAIAPHLYKFHGILNG 795 (1036)
T ss_pred HHH-HHHHhhhhhccCCCCEEEEeCCccc--chhHHHHHHHHCCEEEeCCHHHHHHHHh----ccCcccccCCEEEEECC
Confidence 322 222211 1123589999997632 1122334456777777777776655443 22333 4789999999
Q ss_pred CCccccchhhhh------------HHHHHhHHHHHHhcCCCC-CCEEEEEecccccCcchHHHHHHHHHHHHHHHHhccC
Q 011954 239 NSKDLMDIAEDS------------VARRVLREHVRESLGVRD-DDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQ 305 (474)
Q Consensus 239 vd~~~~~~~~~~------------~~~~~~~~~~r~~~~~~~-~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~ 305 (474)
||.+.|.|..+. ..+...+..+++++|++. +.++|+++||+.++||+++|++|+.++.+
T Consensus 796 ID~~~w~P~tD~~lp~~y~~~~~~~gK~~~k~~Lr~~lGL~~~d~plVg~VGRL~~qKGvdlLi~Al~~ll~-------- 867 (1036)
T PLN02316 796 IDPDIWDPYNDNFIPVPYTSENVVEGKRAAKEALQQRLGLKQADLPLVGIITRLTHQKGIHLIKHAIWRTLE-------- 867 (1036)
T ss_pred ccccccCCcccccccccCCchhhhhhhhhhHHHHHHHhCCCcccCeEEEEEeccccccCHHHHHHHHHHHhh--------
Confidence 999988765321 112234567899999974 67899999999999999999999998865
Q ss_pred CCcEEEEEEcCCCCcCchHHHHHHHHHHHcCC--CCeEEEecCCCCh--HHHHhcCCEEEEcCCCCCCCCchHHHHHHhc
Q 011954 306 VPSMHAVVVGSDMNAQTKFETELRNFVAEKKI--QDHVHFVNKTLTV--SPYLASIDVLVQNSQARGECFGRITIEAMAF 381 (474)
Q Consensus 306 ~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l--~~~v~~~g~~~~~--~~~~~~adv~v~ps~~~~E~~~~~~~EAma~ 381 (474)
.+++|+|+|+|+.. .+...++++++++++ +++|.|.|..++. ..+|+.||+||+||+ .|+||++++|||+|
T Consensus 868 -~~~qlVIvG~Gpd~--~~e~~l~~La~~Lg~~~~~rV~f~g~~de~lah~iyaaADiflmPS~--~EP~GLvqLEAMa~ 942 (1036)
T PLN02316 868 -RNGQVVLLGSAPDP--RIQNDFVNLANQLHSSHHDRARLCLTYDEPLSHLIYAGADFILVPSI--FEPCGLTQLTAMRY 942 (1036)
T ss_pred -cCcEEEEEeCCCCH--HHHHHHHHHHHHhCccCCCeEEEEecCCHHHHHHHHHhCcEEEeCCc--ccCccHHHHHHHHc
Confidence 57999999998632 357889999998876 5789998865443 479999999999999 99999999999999
Q ss_pred CCCEEEcCCCCcceeeeeC-------------CceeeecCCCCChHHHHHHHHHHhhC-HHHHHHHHHHHHHHHHHhcCH
Q 011954 382 QLPVLGTAAGGTMEIVVNG-------------TTGLLHPTGKEGVTPLANNIVKLATH-VERRLTMGKKGYERVKDRFLE 447 (474)
Q Consensus 382 G~PvI~s~~~g~~e~v~~~-------------~~G~l~~~~d~~~~~la~~i~~ll~~-~~~~~~~~~~~~~~~~~~fs~ 447 (474)
|+|+|++++||++|+|.++ .+|+++++.| +++|+++|.+++.+ ++....+++.+++.+.+.|||
T Consensus 943 GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~~~d--~~aLa~AL~raL~~~~~~~~~~~~~~r~~m~~dFSW 1020 (1036)
T PLN02316 943 GSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFDGAD--AAGVDYALNRAISAWYDGRDWFNSLCKRVMEQDWSW 1020 (1036)
T ss_pred CCCeEEEcCCCcHhhccccccccccccccccCCceEEeCCCC--HHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhhCCH
Confidence 9999999999999999874 6899999999 99999999999986 466777889999999999999
Q ss_pred HHHHHHHHHHHHHHH
Q 011954 448 HHMSQRIALVLREVL 462 (474)
Q Consensus 448 ~~~~~~~~~~~~~~~ 462 (474)
+.++++|+++|+++.
T Consensus 1021 ~~~A~~Y~~LY~~a~ 1035 (1036)
T PLN02316 1021 NRPALDYMELYHSAR 1035 (1036)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999999875
|
|
| >PRK14099 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-44 Score=352.75 Aligned_cols=371 Identities=20% Similarity=0.180 Sum_probs=268.9
Q ss_pred cccCEEEEEecCCCC----CChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhh-----hhcccch---------hccc
Q 011954 72 MKSKLVLLVSHELSL----SGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVI-----YSLEHKM---------LDRG 133 (474)
Q Consensus 72 ~~~~kIl~v~~~~~~----gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~-----~~~~~~~---------~~~~ 133 (474)
|++|||||++.+..| ||..-++..|.++|+++||+|.|+.+.++.-..... ..+...+ ...+
T Consensus 1 ~~~~~il~v~~E~~p~~k~ggl~dv~~~lp~~l~~~g~~v~v~~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (485)
T PRK14099 1 MTPLRVLSVASEIFPLIKTGGLADVAGALPAALKAHGVEVRTLVPGYPAVLAGIEDAEQVHSFPDLFGGPARLLAARAGG 80 (485)
T ss_pred CCCcEEEEEEeccccccCCCcHHHHHHHHHHHHHHCCCcEEEEeCCCcchhhhhcCceEEEEEeeeCCceEEEEEEEeCC
Confidence 568999999999655 888999999999999999999999987654321100 0000000 0011
Q ss_pred eeeeeh-----------------------h--cHH-------HHh----hhcCCCEEEEcccchhhHHhHHhhhcccccc
Q 011954 134 VQVLSA-----------------------K--GEK-------AIN----TALNADLVVLNTAVAGKWLDGVLKDKVSQVL 177 (474)
Q Consensus 134 ~~~~~~-----------------------~--~~~-------~~~----~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~ 177 (474)
+.++-. . ++- .+. ...+|||||+|+..++.....+ ... ....
T Consensus 81 v~~~~~~~~~~f~r~~~~y~~~~~~~~~d~~~rf~~f~~a~~~~~~~~~~~~~pDIiH~Hdw~~~l~~~~l-~~~-~~~~ 158 (485)
T PRK14099 81 LDLFVLDAPHLYDRPGNPYVGPDGKDWPDNAQRFAALARAAAAIGQGLVPGFVPDIVHAHDWQAGLAPAYL-HYS-GRPA 158 (485)
T ss_pred ceEEEEeChHhhCCCCCCCCCccCCCCCcHHHHHHHHHHHHHHHHhhhccCCCCCEEEECCcHHHHHHHHH-HhC-CCCC
Confidence 211100 0 000 011 1368999999986655543322 211 1123
Q ss_pred cceeeeeecccccc-chh------------------h-------hhhcccccccccccccccHHHHHHh-----HHHHhc
Q 011954 178 PKVLWWIHEMRGHY-FKL------------------E-------YVKHLPFVAGAMIDSYTTAEYWKNR-----TRERLG 226 (474)
Q Consensus 178 ~~~v~~~h~~~~~~-~~~------------------~-------~~~~~~~~~~~~~~s~~~~~~~~~~-----~~~~~~ 226 (474)
.+++.|+|+..... +.. . ....+..++.++++|....+.+... +...++
T Consensus 159 ~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~~ad~vitVS~~~a~ei~~~~~g~gl~~~l~ 238 (485)
T PRK14099 159 PGTVFTIHNLAFQGQFPRELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQLADRITTVSPTYALEIQGPEAGMGLDGLLR 238 (485)
T ss_pred CCEEEeCCCCCCCCcCCHHHHHHcCCChHHcCchhhhhCCCccHHHHHHHhcCeeeecChhHHHHHhcccCCcChHHHHH
Confidence 58999999863221 100 0 1122356667777777776665432 011223
Q ss_pred CCCCCeEEEeCCCCccccchhhhhH-----------HHHHhHHHHHHhcCCCC--CCEEEEEecccccCcchHHHHHHHH
Q 011954 227 IRMPETYVVHLGNSKDLMDIAEDSV-----------ARRVLREHVRESLGVRD--DDLLFAIINSVSRGKGQDLFLHSFY 293 (474)
Q Consensus 227 ~~~~ki~vi~ngvd~~~~~~~~~~~-----------~~~~~~~~~r~~~~~~~--~~~~i~~vgrl~~~Kg~~~ll~a~~ 293 (474)
....++.+|+||||.+.|.|..+.. .+...+..+++++|++. +.++|+++||+.++||++.+++|+.
T Consensus 239 ~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~li~~VgRL~~~KG~d~Li~A~~ 318 (485)
T PRK14099 239 QRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKAALQARFGLDPDPDALLLGVISRLSWQKGLDLLLEALP 318 (485)
T ss_pred hhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHHhHHHHHHHcCCCcccCCcEEEEEecCCccccHHHHHHHHH
Confidence 3567899999999999988764321 12233567899999974 4688999999999999999999999
Q ss_pred HHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCCCChHHHH-hcCCEEEEcCCCCCCCCc
Q 011954 294 ESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYL-ASIDVLVQNSQARGECFG 372 (474)
Q Consensus 294 ~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~-~~adv~v~ps~~~~E~~~ 372 (474)
++.+ .+++|+|+|+|+. ++.+.+++++++++ ...+.|+|+.+++..+| +.||+||+||. .|+||
T Consensus 319 ~l~~---------~~~~lvivG~G~~---~~~~~l~~l~~~~~-~~v~~~~G~~~~l~~~~~a~aDifv~PS~--~E~fG 383 (485)
T PRK14099 319 TLLG---------EGAQLALLGSGDA---ELEARFRAAAQAYP-GQIGVVIGYDEALAHLIQAGADALLVPSR--FEPCG 383 (485)
T ss_pred HHHh---------cCcEEEEEecCCH---HHHHHHHHHHHHCC-CCEEEEeCCCHHHHHHHHhcCCEEEECCc--cCCCc
Confidence 8864 5789999999851 25678888888775 23347999988899887 57999999999 89999
Q ss_pred hHHHHHHhcCCCEEEcCCCCcceeeeeC---------CceeeecCCCCChHHHHHHHHH---HhhCHHHHHHHHHHHHHH
Q 011954 373 RITIEAMAFQLPVLGTAAGGTMEIVVNG---------TTGLLHPTGKEGVTPLANNIVK---LATHVERRLTMGKKGYER 440 (474)
Q Consensus 373 ~~~~EAma~G~PvI~s~~~g~~e~v~~~---------~~G~l~~~~d~~~~~la~~i~~---ll~~~~~~~~~~~~~~~~ 440 (474)
++++|||+||+|+|++++||+.|+|.++ .+|++++++| +++|+++|.+ +++|++.+++|++++++
T Consensus 384 l~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~~d--~~~La~ai~~a~~l~~d~~~~~~l~~~~~~- 460 (485)
T PRK14099 384 LTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQFSPVT--ADALAAALRKTAALFADPVAWRRLQRNGMT- 460 (485)
T ss_pred HHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEeCCCC--HHHHHHHHHHHHHHhcCHHHHHHHHHHhhh-
Confidence 9999999999999999999999998775 5899999999 9999999997 67799999999998863
Q ss_pred HHHhcCHHHHHHHHHHHHHHHHhh
Q 011954 441 VKDRFLEHHMSQRIALVLREVLQY 464 (474)
Q Consensus 441 ~~~~fs~~~~~~~~~~~~~~~~~~ 464 (474)
++|||++++++|+++|+++++.
T Consensus 461 --~~fSw~~~a~~y~~lY~~l~~~ 482 (485)
T PRK14099 461 --TDVSWRNPAQHYAALYRSLVAE 482 (485)
T ss_pred --hcCChHHHHHHHHHHHHHHHhh
Confidence 6799999999999999999865
|
|
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-43 Score=357.96 Aligned_cols=376 Identities=14% Similarity=0.103 Sum_probs=274.2
Q ss_pred ccCEEEEEecCCCC----CChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhcc-----c--ch------------
Q 011954 73 KSKLVLLVSHELSL----SGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLE-----H--KM------------ 129 (474)
Q Consensus 73 ~~~kIl~v~~~~~~----gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~-----~--~~------------ 129 (474)
+.|||+||+.+..| ||..-++..|.++|++.||+|.|+++.++.........+. . .+
T Consensus 480 ~~mkILfVasE~aP~aKtGGLaDVv~sLPkAL~~~GhdV~VIlP~Y~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~ 559 (977)
T PLN02939 480 SGLHIVHIAAEMAPVAKVGGLADVVSGLGKALQKKGHLVEIVLPKYDCMQYDQIRNLKVLDVVVESYFDGNLFKNKIWTG 559 (977)
T ss_pred CCCEEEEEEcccccccccccHHHHHHHHHHHHHHcCCeEEEEeCCCcccChhhhhcccccceEEEEeecCceeEEEEEEE
Confidence 47899999998655 8889999999999999999999999877643311000000 0 00
Q ss_pred hccceeeeehh------------------cH-H---------HHhh--hcCCCEEEEcccchhhHHhHHhhhc--ccccc
Q 011954 130 LDRGVQVLSAK------------------GE-K---------AINT--ALNADLVVLNTAVAGKWLDGVLKDK--VSQVL 177 (474)
Q Consensus 130 ~~~~~~~~~~~------------------~~-~---------~~~~--~~~~DiV~~~~~~~~~~~~~~~~~~--~~~~~ 177 (474)
...|+.++... .. + .+.. ..+|||||+|+..++.+...+.... .....
T Consensus 560 ~~~GV~vyfId~~~~~~fF~R~~iYg~~Dn~~RF~~FsrAaLe~~~~~~~~PDIIH~HDW~TaLV~pll~~~y~~~~~~~ 639 (977)
T PLN02939 560 TVEGLPVYFIEPQHPSKFFWRAQYYGEHDDFKRFSYFSRAALELLYQSGKKPDIIHCHDWQTAFVAPLYWDLYAPKGFNS 639 (977)
T ss_pred EECCeeEEEEecCCchhccCCCCCCCCccHHHHHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHHhhccCCC
Confidence 00122222110 00 0 1111 2689999999987766433322211 01123
Q ss_pred cceeeeeecccccc-chh----------hh------------------hhcccccccccccccccHHHHHHh----HHHH
Q 011954 178 PKVLWWIHEMRGHY-FKL----------EY------------------VKHLPFVAGAMIDSYTTAEYWKNR----TRER 224 (474)
Q Consensus 178 ~~~v~~~h~~~~~~-~~~----------~~------------------~~~~~~~~~~~~~s~~~~~~~~~~----~~~~ 224 (474)
.+++.++|+..... +.. .+ ...+.+.+.++++|....+.+... +...
T Consensus 640 ~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~l~~~d~le~~~~~~iN~LK~GIv~AD~VtTVSptYA~EI~te~G~GL~~~ 719 (977)
T PLN02939 640 ARICFTCHNFEYQGTAPASDLASCGLDVHQLDRPDRMQDNAHGRINVVKGAIVYSNIVTTVSPTYAQEVRSEGGRGLQDT 719 (977)
T ss_pred CcEEEEeCCCcCCCcCCHHHHHHcCCCHHHccChhhhhhccCCchHHHHHHHHhCCeeEeeeHHHHHHHHHHhccchHHH
Confidence 58999999864111 000 00 011224455666666665554431 1123
Q ss_pred hcCCCCCeEEEeCCCCccccchhhhhH-----------HHHHhHHHHHHhcCCCC---CCEEEEEecccccCcchHHHHH
Q 011954 225 LGIRMPETYVVHLGNSKDLMDIAEDSV-----------ARRVLREHVRESLGVRD---DDLLFAIINSVSRGKGQDLFLH 290 (474)
Q Consensus 225 ~~~~~~ki~vi~ngvd~~~~~~~~~~~-----------~~~~~~~~~r~~~~~~~---~~~~i~~vgrl~~~Kg~~~ll~ 290 (474)
++....++.+|+||||.+.|.|..+.. .+...+..+++++|++. +.++|+++||+.++||++.+++
T Consensus 720 L~~~~~Kl~gIlNGID~e~wnPatD~~L~~~Ys~~dl~GK~~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLle 799 (977)
T PLN02939 720 LKFHSKKFVGILNGIDTDTWNPSTDRFLKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRH 799 (977)
T ss_pred hccccCCceEEecceehhhcCCccccccccccChhhhhhhhhhhHHHHHHhCCCcccccceEEEEeecCCcccChHHHHH
Confidence 456678999999999999998765321 22334677999999974 4589999999999999999999
Q ss_pred HHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCCCC--hHHHHhcCCEEEEcCCCCC
Q 011954 291 SFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLT--VSPYLASIDVLVQNSQARG 368 (474)
Q Consensus 291 a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~--~~~~~~~adv~v~ps~~~~ 368 (474)
|+..+.+ ++++|+|+|+|+.. .+...++.+++++++.++|.|+|..++ ...+|+.||+||+||+ .
T Consensus 800 A~~~Ll~---------~dvqLVIvGdGp~~--~~e~eL~~La~~l~l~drV~FlG~~de~lah~IYAaADIFLmPSr--~ 866 (977)
T PLN02939 800 AIYKTAE---------LGGQFVLLGSSPVP--HIQREFEGIADQFQSNNNIRLILKYDEALSHSIYAASDMFIIPSM--F 866 (977)
T ss_pred HHHHHhh---------cCCEEEEEeCCCcH--HHHHHHHHHHHHcCCCCeEEEEeccCHHHHHHHHHhCCEEEECCC--c
Confidence 9988754 57899999999622 256788999999999899999997654 3689999999999999 8
Q ss_pred CCCchHHHHHHhcCCCEEEcCCCCcceeeee---------CCceeeecCCCCChHHHHHHHHHHhh----CHHHHHHHHH
Q 011954 369 ECFGRITIEAMAFQLPVLGTAAGGTMEIVVN---------GTTGLLHPTGKEGVTPLANNIVKLAT----HVERRLTMGK 435 (474)
Q Consensus 369 E~~~~~~~EAma~G~PvI~s~~~g~~e~v~~---------~~~G~l~~~~d~~~~~la~~i~~ll~----~~~~~~~~~~ 435 (474)
|+||++++|||+||+|+|++++||+.|+|.+ +.+|++++++| +++|+++|.++++ |++.+++|++
T Consensus 867 EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D--~eaLa~AL~rAL~~~~~dpe~~~~L~~ 944 (977)
T PLN02939 867 EPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPD--EQGLNSALERAFNYYKRKPEVWKQLVQ 944 (977)
T ss_pred cCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEEecCCC--HHHHHHHHHHHHHHhccCHHHHHHHHH
Confidence 9999999999999999999999999999875 47999999998 9999999998775 7999999988
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHhhhh
Q 011954 436 KGYERVKDRFLEHHMSQRIALVLREVLQYAK 466 (474)
Q Consensus 436 ~~~~~~~~~fs~~~~~~~~~~~~~~~~~~~~ 466 (474)
++. .+.|||+.++++|+++|++++...+
T Consensus 945 ~am---~~dFSWe~~A~qYeeLY~~ll~~~~ 972 (977)
T PLN02939 945 KDM---NIDFSWDSSASQYEELYQRAVARAR 972 (977)
T ss_pred HHH---HhcCCHHHHHHHHHHHHHHHHHhhh
Confidence 664 4679999999999999999987654
|
|
| >PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-44 Score=353.98 Aligned_cols=356 Identities=17% Similarity=0.155 Sum_probs=260.1
Q ss_pred cccCEEEEEecCC---CCCChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhccc-------chhccceeeeehhc
Q 011954 72 MKSKLVLLVSHEL---SLSGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEH-------KMLDRGVQVLSAKG 141 (474)
Q Consensus 72 ~~~~kIl~v~~~~---~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~ 141 (474)
+++|||+++.... ..||++.++.+++++|.++||+|++++...+............ ........+.....
T Consensus 56 ~~~mrI~~~~~~~~~~~~gG~~~~~~~l~~~L~~~G~eV~vlt~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~ 135 (465)
T PLN02871 56 SRPRRIALFVEPSPFSYVSGYKNRFQNFIRYLREMGDEVLVVTTDEGVPQEFHGAKVIGSWSFPCPFYQKVPLSLALSPR 135 (465)
T ss_pred CCCceEEEEECCcCCcccccHHHHHHHHHHHHHHCCCeEEEEecCCCCCccccCceeeccCCcCCccCCCceeeccCCHH
Confidence 6789999997543 3389999999999999999999999996543211000000000 00000001111113
Q ss_pred HHHHhhhcCCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccccchh--------h----hhhccccccccccc
Q 011954 142 EKAINTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYFKL--------E----YVKHLPFVAGAMID 209 (474)
Q Consensus 142 ~~~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~--------~----~~~~~~~~~~~~~~ 209 (474)
...+.+..+||+||+|++....+........ ...|++.+.|+....+... . .....+..+.+++.
T Consensus 136 l~~~i~~~kpDiIh~~~~~~~~~~~~~~ak~---~~ip~V~~~h~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ad~ii~~ 212 (465)
T PLN02871 136 IISEVARFKPDLIHASSPGIMVFGALFYAKL---LCVPLVMSYHTHVPVYIPRYTFSWLVKPMWDIIRFLHRAADLTLVT 212 (465)
T ss_pred HHHHHHhCCCCEEEECCCchhHHHHHHHHHH---hCCCEEEEEecCchhhhhcccchhhHHHHHHHHHHHHhhCCEEEEC
Confidence 4556667899999999864433322222221 2357888888643221110 0 01122344555555
Q ss_pred ccccHHHHHHhHHHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcC-CCCCCEEEEEecccccCcchHHH
Q 011954 210 SYTTAEYWKNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLG-VRDDDLLFAIINSVSRGKGQDLF 288 (474)
Q Consensus 210 s~~~~~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~-~~~~~~~i~~vgrl~~~Kg~~~l 288 (474)
+....+. +......+.+++.+||||+|.+.|.+.... ..++.++. .++++++|+|+||+.+.||++.+
T Consensus 213 S~~~~~~----l~~~~~~~~~kv~vi~nGvd~~~f~p~~~~-------~~~~~~~~~~~~~~~~i~~vGrl~~~K~~~~l 281 (465)
T PLN02871 213 SPALGKE----LEAAGVTAANRIRVWNKGVDSESFHPRFRS-------EEMRARLSGGEPEKPLIVYVGRLGAEKNLDFL 281 (465)
T ss_pred CHHHHHH----HHHcCCCCcCeEEEeCCccCccccCCcccc-------HHHHHHhcCCCCCCeEEEEeCCCchhhhHHHH
Confidence 5554444 333333456789999999999988764321 23444443 23467889999999999999999
Q ss_pred HHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCC--CChHHHHhcCCEEEEcCCC
Q 011954 289 LHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKT--LTVSPYLASIDVLVQNSQA 366 (474)
Q Consensus 289 l~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~--~~~~~~~~~adv~v~ps~~ 366 (474)
+++++++ ++++|+|+|+|+ +.++++++++. .+|+|+|++ +++..+|+.||++|+||.
T Consensus 282 i~a~~~~-----------~~~~l~ivG~G~-----~~~~l~~~~~~----~~V~f~G~v~~~ev~~~~~~aDv~V~pS~- 340 (465)
T PLN02871 282 KRVMERL-----------PGARLAFVGDGP-----YREELEKMFAG----TPTVFTGMLQGDELSQAYASGDVFVMPSE- 340 (465)
T ss_pred HHHHHhC-----------CCcEEEEEeCCh-----HHHHHHHHhcc----CCeEEeccCCHHHHHHHHHHCCEEEECCc-
Confidence 9998755 789999999996 77788887764 379999987 789999999999999998
Q ss_pred CCCCCchHHHHHHhcCCCEEEcCCCCcceeeee---CCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHH
Q 011954 367 RGECFGRITIEAMAFQLPVLGTAAGGTMEIVVN---GTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKD 443 (474)
Q Consensus 367 ~~E~~~~~~~EAma~G~PvI~s~~~g~~e~v~~---~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~ 443 (474)
.|+||++++|||+||+|||+++.||+.|++.+ +++|++++++| +++++++|.++++|++.+++|++++++++.
T Consensus 341 -~E~~g~~vlEAmA~G~PVI~s~~gg~~eiv~~~~~~~~G~lv~~~d--~~~la~~i~~ll~~~~~~~~~~~~a~~~~~- 416 (465)
T PLN02871 341 -SETLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEGKTGFLYTPGD--VDDCVEKLETLLADPELRERMGAAAREEVE- 416 (465)
T ss_pred -ccccCcHHHHHHHcCCCEEEcCCCCcHhhhhcCCCCCceEEeCCCC--HHHHHHHHHHHHhCHHHHHHHHHHHHHHHH-
Confidence 89999999999999999999999999999998 89999999998 999999999999999999999999999885
Q ss_pred hcCHHHHHHHHHH-HHHHHHhhhh
Q 011954 444 RFLEHHMSQRIAL-VLREVLQYAK 466 (474)
Q Consensus 444 ~fs~~~~~~~~~~-~~~~~~~~~~ 466 (474)
+|+|+.+++++++ .|++++...+
T Consensus 417 ~fsw~~~a~~l~~~~Y~~~~~~~~ 440 (465)
T PLN02871 417 KWDWRAATRKLRNEQYSAAIWFWR 440 (465)
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHH
Confidence 5999999999998 7999987543
|
|
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-43 Score=351.78 Aligned_cols=368 Identities=18% Similarity=0.180 Sum_probs=263.2
Q ss_pred CEEEEEecCCCC----CChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhh--ccc---------chhccceeeeeh
Q 011954 75 KLVLLVSHELSL----SGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYS--LEH---------KMLDRGVQVLSA 139 (474)
Q Consensus 75 ~kIl~v~~~~~~----gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~--~~~---------~~~~~~~~~~~~ 139 (474)
|||++++.+..| ||.+.++..|+++|+++||+|.|+++..+......... ... .....|+.++..
T Consensus 1 m~i~~vs~e~~P~~k~GGl~~~v~~L~~~L~~~G~~V~v~~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~v 80 (466)
T PRK00654 1 MKILFVASECAPLIKTGGLGDVVGALPKALAALGHDVRVLLPGYPAIREKLRDAQVVGRLDLFTVLFGHLEGDGVPVYLI 80 (466)
T ss_pred CeEEEEEcccccCcccCcHHHHHHHHHHHHHHCCCcEEEEecCCcchhhhhcCceEEEEeeeEEEEEEeEEcCCceEEEE
Confidence 789999988544 88899999999999999999999997755322110000 000 001122322210
Q ss_pred h----------------c---------HHHHhh--hcCCCEEEEcccchhhHHhHHhhhc-ccccccceeeeeecccccc
Q 011954 140 K----------------G---------EKAINT--ALNADLVVLNTAVAGKWLDGVLKDK-VSQVLPKVLWWIHEMRGHY 191 (474)
Q Consensus 140 ~----------------~---------~~~~~~--~~~~DiV~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~h~~~~~~ 191 (474)
. . ...+.. ..+|||||+|+..++.....+.... ......|++.++|+.....
T Consensus 81 ~~~~~~~~~~~y~~~d~~~r~~~f~~~~~~~~~~~~~~pDiiH~h~w~~~~~~~~l~~~~~~~~~~~~~v~TiH~~~~~g 160 (466)
T PRK00654 81 DAPHLFDRPSGYGYPDNGERFAFFSWAAAEFAEGLDPRPDIVHAHDWHTGLIPALLKEKYWRGYPDIKTVFTIHNLAYQG 160 (466)
T ss_pred eCHHHcCCCCCCCCcChHHHHHHHHHHHHHHHHhcCCCCceEEECCcHHHHHHHHHHHhhhccCCCCCEEEEcCCCcCCC
Confidence 0 0 001111 1489999999866554333322211 1112368999999864211
Q ss_pred -chh---------------h----------hhhcccccccccccccccHHHHHHh-----HHHHhcCCCCCeEEEeCCCC
Q 011954 192 -FKL---------------E----------YVKHLPFVAGAMIDSYTTAEYWKNR-----TRERLGIRMPETYVVHLGNS 240 (474)
Q Consensus 192 -~~~---------------~----------~~~~~~~~~~~~~~s~~~~~~~~~~-----~~~~~~~~~~ki~vi~ngvd 240 (474)
+.. . ....+...+.++++|....+.+... +...++....++.+|+||||
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS~~~~~ei~~~~~~~gl~~~~~~~~~ki~vI~NGid 240 (466)
T PRK00654 161 LFPAEILGELGLPAEAFHLEGLEFYGQISFLKAGLYYADRVTTVSPTYAREITTPEFGYGLEGLLRARSGKLSGILNGID 240 (466)
T ss_pred cCCHHHHHHcCCChHHcCchhhhcCCcccHHHHHHHhcCcCeeeCHHHHHHhccccCCcChHHHHHhcccCceEecCCCC
Confidence 100 0 0112345566666766665554421 11123445678999999999
Q ss_pred ccccchhhhhH-----------HHHHhHHHHHHhcCCCC-CCEEEEEecccccCcchHHHHHHHHHHHHHHHHhccCCCc
Q 011954 241 KDLMDIAEDSV-----------ARRVLREHVRESLGVRD-DDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPS 308 (474)
Q Consensus 241 ~~~~~~~~~~~-----------~~~~~~~~~r~~~~~~~-~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~~ 308 (474)
.+.|.|..+.. .+...+..+++++|+++ +.++|+++||+.++||++.+++|+.++.+ .+
T Consensus 241 ~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~i~~vGRl~~~KG~~~li~a~~~l~~---------~~ 311 (466)
T PRK00654 241 YDIWNPETDPLLAANYSADDLEGKAENKRALQERFGLPDDDAPLFAMVSRLTEQKGLDLVLEALPELLE---------QG 311 (466)
T ss_pred ccccCCccCcccccccChhhhhchHHHHHHHHHHhCCCCCCCcEEEEeeccccccChHHHHHHHHHHHh---------cC
Confidence 99987753211 12233567899999975 67899999999999999999999998865 57
Q ss_pred EEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEE-EecCCCC-hHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEE
Q 011954 309 MHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVH-FVNKTLT-VSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVL 386 (474)
Q Consensus 309 ~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~-~~g~~~~-~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI 386 (474)
++|+|+|+|+. .+.+.+++++++++. ++. +.|+.++ +..+|+.||++|+||. .|+||++++|||+||+|+|
T Consensus 312 ~~lvivG~g~~---~~~~~l~~l~~~~~~--~v~~~~g~~~~~~~~~~~~aDv~v~PS~--~E~~gl~~lEAma~G~p~V 384 (466)
T PRK00654 312 GQLVLLGTGDP---ELEEAFRALAARYPG--KVGVQIGYDEALAHRIYAGADMFLMPSR--FEPCGLTQLYALRYGTLPI 384 (466)
T ss_pred CEEEEEecCcH---HHHHHHHHHHHHCCC--cEEEEEeCCHHHHHHHHhhCCEEEeCCC--CCCchHHHHHHHHCCCCEE
Confidence 99999999842 256788999988873 455 4677644 5689999999999999 8999999999999999999
Q ss_pred EcCCCCcceeeeeC------CceeeecCCCCChHHHHHHHHHHhh---CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 011954 387 GTAAGGTMEIVVNG------TTGLLHPTGKEGVTPLANNIVKLAT---HVERRLTMGKKGYERVKDRFLEHHMSQRIALV 457 (474)
Q Consensus 387 ~s~~~g~~e~v~~~------~~G~l~~~~d~~~~~la~~i~~ll~---~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~ 457 (474)
++++||+.|+|.++ .+|++++++| +++|+++|.++++ +++.+.+|++++++ ++|||++++++|+++
T Consensus 385 ~~~~gG~~e~v~~~~~~~~~~~G~lv~~~d--~~~la~~i~~~l~~~~~~~~~~~~~~~~~~---~~fsw~~~a~~~~~l 459 (466)
T PRK00654 385 VRRTGGLADTVIDYNPEDGEATGFVFDDFN--AEDLLRALRRALELYRQPPLWRALQRQAMA---QDFSWDKSAEEYLEL 459 (466)
T ss_pred EeCCCCccceeecCCCCCCCCceEEeCCCC--HHHHHHHHHHHHHHhcCHHHHHHHHHHHhc---cCCChHHHHHHHHHH
Confidence 99999999999888 8999999999 9999999999876 77778888887753 679999999999999
Q ss_pred HHHHHh
Q 011954 458 LREVLQ 463 (474)
Q Consensus 458 ~~~~~~ 463 (474)
|+++++
T Consensus 460 Y~~~~~ 465 (466)
T PRK00654 460 YRRLLG 465 (466)
T ss_pred HHHHhh
Confidence 999864
|
|
| >PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-43 Score=345.94 Aligned_cols=349 Identities=18% Similarity=0.204 Sum_probs=261.3
Q ss_pred CEEEEEecCCCCCChhHHHHHHHHHHHhcCcEEEEEeCCCCCCch--h--hhhhc-------ccchh----cc-------
Q 011954 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWITNQKPNEPD--E--VIYSL-------EHKML----DR------- 132 (474)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~--~--~~~~~-------~~~~~----~~------- 132 (474)
|||+++.+.++ .-.|+++.+-+.+|.++||+|.+++...+.... . ..+.+ ..... ..
T Consensus 1 m~ia~~~~~~P-~~setFi~~ei~~l~~~G~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (406)
T PRK15427 1 MKVGFFLLKFP-LSSETFVLNQITAFIDMGFEVEIVALQKGDTQNTHAAWTKYNLAAKTRWLQDEPQGKVAKLRHRASQT 79 (406)
T ss_pred CeEEEEeccCC-ccchhhHHHHHHHHHHcCceEEEEEccCCCccccccchhhhccccceeecCcCccchHHHHhhhhhhH
Confidence 68999999877 444899999999999999999999965443210 0 00000 00000 00
Q ss_pred --cee----e--eehh----cH---------HHHhhhcCCCEEEEcccchhhHHhHHhhhcccccccceeeeeecccccc
Q 011954 133 --GVQ----V--LSAK----GE---------KAINTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHY 191 (474)
Q Consensus 133 --~~~----~--~~~~----~~---------~~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~ 191 (474)
... . .... .. ....+..+||+||+|....+.....+... .....+.++++|+.....
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~diihaH~~~~~~~~~~~~~~--~~~~~~~~~t~Hg~d~~~ 157 (406)
T PRK15427 80 LRGIHRKNTWKALNLKRYGAESRNLILSAICAQVATPFVADVFIAHFGPAGVTAAKLREL--GVLRGKIATIFHGIDISS 157 (406)
T ss_pred hhhhcccchhccCChhhhhhhhHHHHHHHHHhhhhccCCCCEEEEcCChHHHHHHHHHHh--CCCCCCeEEEEccccccc
Confidence 000 0 0000 00 11123468999999987655433333221 112235677899753221
Q ss_pred ------chhhhhhcccccccccccccccHHHHHHhHHHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcC
Q 011954 192 ------FKLEYVKHLPFVAGAMIDSYTTAEYWKNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLG 265 (474)
Q Consensus 192 ------~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~ 265 (474)
+...+...+...+.+++.|....+. +. .++++.+++.+||||+|.+.|.+....
T Consensus 158 ~~~~~~~~~~~~~~~~~ad~vv~~S~~~~~~----l~-~~g~~~~ki~vi~nGvd~~~f~~~~~~--------------- 217 (406)
T PRK15427 158 REVLNHYTPEYQQLFRRGDLMLPISDLWAGR----LQ-KMGCPPEKIAVSRMGVDMTRFSPRPVK--------------- 217 (406)
T ss_pred chhhhhhhHHHHHHHHhCCEEEECCHHHHHH----HH-HcCCCHHHEEEcCCCCCHHHcCCCccc---------------
Confidence 1112333445566666665554444 33 357788899999999999988653211
Q ss_pred CCCCCEEEEEecccccCcchHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEec
Q 011954 266 VRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVN 345 (474)
Q Consensus 266 ~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g 345 (474)
.+.+++.|+++||+.+.||++.+++|++.+.+ ++++++|+|+|+|+ ..++++++++++++.++|+|+|
T Consensus 218 ~~~~~~~il~vGrl~~~Kg~~~ll~a~~~l~~-------~~~~~~l~ivG~G~-----~~~~l~~~~~~~~l~~~V~~~G 285 (406)
T PRK15427 218 APATPLEIISVARLTEKKGLHVAIEACRQLKE-------QGVAFRYRILGIGP-----WERRLRTLIEQYQLEDVVEMPG 285 (406)
T ss_pred cCCCCeEEEEEeCcchhcCHHHHHHHHHHHHh-------hCCCEEEEEEECch-----hHHHHHHHHHHcCCCCeEEEeC
Confidence 12456789999999999999999999998865 45899999999996 7889999999999999999999
Q ss_pred CC--CChHHHHhcCCEEEEcCCC----CCCCCchHHHHHHhcCCCEEEcCCCCcceeeeeCCceeeecCCCCChHHHHHH
Q 011954 346 KT--LTVSPYLASIDVLVQNSQA----RGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANN 419 (474)
Q Consensus 346 ~~--~~~~~~~~~adv~v~ps~~----~~E~~~~~~~EAma~G~PvI~s~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~ 419 (474)
+. +++.++|+.||++|+||.. ..||+|++++|||+||+|||+|+.||++|++.++.+|++++++| +++++++
T Consensus 286 ~~~~~el~~~l~~aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~E~v~~~~~G~lv~~~d--~~~la~a 363 (406)
T PRK15427 286 FKPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPELVEADKSGWLVPEND--AQALAQR 363 (406)
T ss_pred CCCHHHHHHHHHhCCEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCchhhhcCCCceEEeCCCC--HHHHHHH
Confidence 85 6899999999999999972 13999999999999999999999999999999999999999999 9999999
Q ss_pred HHHHhh-CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 011954 420 IVKLAT-HVERRLTMGKKGYERVKDRFLEHHMSQRIALVLRE 460 (474)
Q Consensus 420 i~~ll~-~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~ 460 (474)
|.++++ |++.+++|++++++++.++|+|+.+++++.++|++
T Consensus 364 i~~l~~~d~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~~ 405 (406)
T PRK15427 364 LAAFSQLDTDELAPVVKRAREKVETDFNQQVINRELASLLQA 405 (406)
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 999999 99999999999999999999999999999999976
|
|
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-43 Score=343.89 Aligned_cols=356 Identities=21% Similarity=0.219 Sum_probs=267.5
Q ss_pred CEEEEEecCCCCCChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhccc-chhccceee--------eehhcHHHH
Q 011954 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEH-KMLDRGVQV--------LSAKGEKAI 145 (474)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~--------~~~~~~~~~ 145 (474)
|||+++++ ...||.++++.+++++|.+.||+|++++...+............ ......... ........+
T Consensus 1 mki~~~~~-p~~gG~~~~~~~la~~L~~~G~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 79 (371)
T cd04962 1 MKIGIVCY-PTYGGSGVVATELGKALARRGHEVHFITSSRPFRLDEYSPNIFFHEVEVPQYPLFQYPPYDLALASKIAEV 79 (371)
T ss_pred CceeEEEE-eCCCCccchHHHHHHHHHhcCCceEEEecCCCcchhhhccCeEEEEecccccchhhcchhHHHHHHHHHHH
Confidence 68999985 44589899999999999999999999996543211110000000 000000000 001223344
Q ss_pred hhhcCCCEEEEcccchhhHHhHHhhhcccccccceeeeeecccccc------chhhhhhcccccccccccccccHHHHHH
Q 011954 146 NTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHY------FKLEYVKHLPFVAGAMIDSYTTAEYWKN 219 (474)
Q Consensus 146 ~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~------~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 219 (474)
.+..+||+||+|.+....+..............++++++|+..... +.......++.++.+++.+....+.+.
T Consensus 80 i~~~~~divh~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~- 158 (371)
T cd04962 80 AKRYKLDLLHVHYAVPHAVAAYLAREILGKKDLPVVTTLHGTDITLVGQDPSFQPATRFSIEKSDGVTAVSESLRQETY- 158 (371)
T ss_pred HhcCCccEEeecccCCccHHHHHHHHhcCcCCCcEEEEEcCCccccccccccchHHHHHHHhhCCEEEEcCHHHHHHHH-
Confidence 5568999999997544322222222111112468888999653211 111122334556666666665544433
Q ss_pred hHHHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHHHHHHHHHHHHHH
Q 011954 220 RTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLI 299 (474)
Q Consensus 220 ~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~ 299 (474)
+.++ ...++.+||||+|...+.+.. ....+++++.++++++++++||+.+.||++.+++++.++.+
T Consensus 159 ---~~~~-~~~~i~vi~n~~~~~~~~~~~--------~~~~~~~~~~~~~~~~il~~g~l~~~K~~~~li~a~~~l~~-- 224 (371)
T cd04962 159 ---ELFD-ITKEIEVIPNFVDEDRFRPKP--------DEALKRRLGAPEGEKVLIHISNFRPVKRIDDVIRIFAKVRK-- 224 (371)
T ss_pred ---HhcC-CcCCEEEecCCcCHhhcCCCc--------hHHHHHhcCCCCCCeEEEEecccccccCHHHHHHHHHHHHh--
Confidence 3333 457899999999988776543 23456678888888999999999999999999999988754
Q ss_pred HHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCCCChHHHHhcCCEEEEcCCCCCCCCchHHHHHH
Q 011954 300 REKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYLASIDVLVQNSQARGECFGRITIEAM 379 (474)
Q Consensus 300 ~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAm 379 (474)
+ .+++|+++|+|+ ..+.++++++++++.++|.|+|+++++.++|+.||++|+||. .|++|++++|||
T Consensus 225 -----~-~~~~l~i~G~g~-----~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~d~~v~ps~--~E~~~~~~~EAm 291 (371)
T cd04962 225 -----E-VPARLLLVGDGP-----ERSPAERLARELGLQDDVLFLGKQDHVEELLSIADLFLLPSE--KESFGLAALEAM 291 (371)
T ss_pred -----c-CCceEEEEcCCc-----CHHHHHHHHHHcCCCceEEEecCcccHHHHHHhcCEEEeCCC--cCCCccHHHHHH
Confidence 2 568999999996 567889999999999999999999999999999999999998 899999999999
Q ss_pred hcCCCEEEcCCCCcceeeeeCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 011954 380 AFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRFLEHHMSQRIALVLR 459 (474)
Q Consensus 380 a~G~PvI~s~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~ 459 (474)
++|+|||+|+.||..|++.++.+|++++++| +++++++|.+++++++.+.+|++++++.+.++|||+.+++++.++|+
T Consensus 292 a~g~PvI~s~~~~~~e~i~~~~~G~~~~~~~--~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~ 369 (371)
T cd04962 292 ACGVPVVASNAGGIPEVVKHGETGFLVDVGD--VEAMAEYALSLLEDDELWQEFSRAARNRAAERFDSERIVPQYEALYR 369 (371)
T ss_pred HcCCCEEEeCCCCchhhhcCCCceEEcCCCC--HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 9999999999999999999999999999988 99999999999999999999999999998899999999999999998
Q ss_pred HH
Q 011954 460 EV 461 (474)
Q Consensus 460 ~~ 461 (474)
++
T Consensus 370 ~~ 371 (371)
T cd04962 370 RL 371 (371)
T ss_pred hC
Confidence 63
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-43 Score=345.60 Aligned_cols=343 Identities=19% Similarity=0.160 Sum_probs=258.7
Q ss_pred EEEEEecCCCC--CChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhcccchhccceeee----------------
Q 011954 76 LVLLVSHELSL--SGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEHKMLDRGVQVL---------------- 137 (474)
Q Consensus 76 kIl~v~~~~~~--gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------- 137 (474)
||+++++.+.| ||.++++.+|+++|.++||+|+|+|...+..... .....++.+.
T Consensus 1 kI~~v~~~~~p~~GG~e~~~~~la~~L~~~G~~V~v~~~~~~~~~~~-------~~~~~~i~v~~~p~~~~~~~~~~~~~ 73 (398)
T cd03796 1 RICMVSDFFYPNLGGVETHIYQLSQCLIKRGHKVVVITHAYGNRVGI-------RYLTNGLKVYYLPFVVFYNQSTLPTF 73 (398)
T ss_pred CeeEEeeccccccccHHHHHHHHHHHHHHcCCeeEEEeccCCcCCCc-------ccccCceeEEEecceeccCCccccch
Confidence 69999997665 8889999999999999999999999653321100 0000111111
Q ss_pred --ehhcHHHHhhhcCCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccccc------hhhhhhccccccccccc
Q 011954 138 --SAKGEKAINTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYF------KLEYVKHLPFVAGAMID 209 (474)
Q Consensus 138 --~~~~~~~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~------~~~~~~~~~~~~~~~~~ 209 (474)
....++......+||+||+|+..........+... ....|++++.|+...... .......++..+.+++.
T Consensus 74 ~~~~~~l~~~~~~~~~DiIh~~~~~~~~~~~~~~~~~--~~~~~~v~t~h~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~ 151 (398)
T cd03796 74 FGTFPLLRNILIRERITIVHGHQAFSALAHEALLHAR--TMGLKTVFTDHSLFGFADASSIHTNKLLRFSLADVDHVICV 151 (398)
T ss_pred hhhHHHHHHHHHhcCCCEEEECCCCchHHHHHHHHhh--hcCCcEEEEecccccccchhhHHhhHHHHHhhccCCEEEEe
Confidence 11223445556899999999865443222211111 123578889997532110 11111223455666665
Q ss_pred ccccHHHHHHhHHHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHHHH
Q 011954 210 SYTTAEYWKNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFL 289 (474)
Q Consensus 210 s~~~~~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~ll 289 (474)
+....+. +....+++..++.+||||+|.+.|.+.... .+++.++++++||+.+.||++.++
T Consensus 152 s~~~~~~----~~~~~~~~~~k~~vi~ngvd~~~f~~~~~~---------------~~~~~~~i~~~grl~~~Kg~~~li 212 (398)
T cd03796 152 SHTSKEN----TVLRASLDPERVSVIPNAVDSSDFTPDPSK---------------RDNDKITIVVISRLVYRKGIDLLV 212 (398)
T ss_pred cHhHhhH----HHHHhCCChhhEEEEcCccCHHHcCCCccc---------------CCCCceEEEEEeccchhcCHHHHH
Confidence 5554443 233456677899999999999888654321 235678999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCC--CChHHHHhcCCEEEEcCCCC
Q 011954 290 HSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKT--LTVSPYLASIDVLVQNSQAR 367 (474)
Q Consensus 290 ~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~--~~~~~~~~~adv~v~ps~~~ 367 (474)
+|+..+.+ +.++++|+|+|+|+ ..+.++++++++++.++|+|+|+. +++..+|+.||++|+||.
T Consensus 213 ~a~~~l~~-------~~~~~~l~i~G~g~-----~~~~l~~~~~~~~l~~~v~~~G~~~~~~~~~~l~~ad~~v~pS~-- 278 (398)
T cd03796 213 GIIPEICK-------KHPNVRFIIGGDGP-----KRILLEEMREKYNLQDRVELLGAVPHERVRDVLVQGHIFLNTSL-- 278 (398)
T ss_pred HHHHHHHh-------hCCCEEEEEEeCCc-----hHHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHHhCCEEEeCCh--
Confidence 99998865 45899999999986 678899999999999999999975 789999999999999998
Q ss_pred CCCCchHHHHHHhcCCCEEEcCCCCcceeeeeCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCH
Q 011954 368 GECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRFLE 447 (474)
Q Consensus 368 ~E~~~~~~~EAma~G~PvI~s~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~fs~ 447 (474)
.|+||++++|||+||+|||+|+.||.+|++.++ .++++++ | +++++++|.+++++......+++++++.+.++|||
T Consensus 279 ~E~~g~~~~EAma~G~PVI~s~~gg~~e~i~~~-~~~~~~~-~--~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~fs~ 354 (398)
T cd03796 279 TEAFCIAIVEAASCGLLVVSTRVGGIPEVLPPD-MILLAEP-D--VESIVRKLEEAISILRTGKHDPWSFHNRVKKMYSW 354 (398)
T ss_pred hhccCHHHHHHHHcCCCEEECCCCCchhheeCC-ceeecCC-C--HHHHHHHHHHHHhChhhhhhHHHHHHHHHHhhCCH
Confidence 899999999999999999999999999999765 4555544 6 89999999999998777777889999999999999
Q ss_pred HHHHHHHHHHHHHHHhh
Q 011954 448 HHMSQRIALVLREVLQY 464 (474)
Q Consensus 448 ~~~~~~~~~~~~~~~~~ 464 (474)
+.++++++++|++++..
T Consensus 355 ~~~~~~~~~~y~~l~~~ 371 (398)
T cd03796 355 EDVAKRTEKVYDRILQT 371 (398)
T ss_pred HHHHHHHHHHHHHHhcC
Confidence 99999999999999864
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. |
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-43 Score=357.11 Aligned_cols=353 Identities=16% Similarity=0.151 Sum_probs=256.3
Q ss_pred EEEEEecCCCCCChhHHHHHHHHHHHhcCc--------------EEEEEeCC--CCCCchhhhhhcccchhccceeeee-
Q 011954 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGA--------------EVVWITNQ--KPNEPDEVIYSLEHKMLDRGVQVLS- 138 (474)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~--------------~V~v~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~- 138 (474)
||+++.+....||+|+++.+|+.+|.+.++ +|.+++.. .+.... ...+...|+.+..
T Consensus 283 rIl~vi~sl~~GGAEr~~~~La~~l~~~~~~~~~~~g~g~~~~~~V~~~~~~~~~g~~~~------~~~L~~~Gv~v~~l 356 (694)
T PRK15179 283 PVLMINGSLGAGGAERQFVNTAVALQSAIQQGQSIAGYGVLGPVQVVCRSLRSREGADFF------AATLADAGIPVSVY 356 (694)
T ss_pred eEEEEeCCCCCCcHHHHHHHHHHHHHhcccCcccccCccCCCCcEEEEEecccccCcchH------HHHHHhCCCeEEEe
Confidence 799999999999999999999999999854 45555321 111111 1111112211111
Q ss_pred --------------------------------hhcHHHHhhhcCCCEEEEcccchhhHHhHHhhhcccccccceee-eee
Q 011954 139 --------------------------------AKGEKAINTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLW-WIH 185 (474)
Q Consensus 139 --------------------------------~~~~~~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~h 185 (474)
...+..+.+..+|||||+|+..+..+...+ .... ..|+++ +.|
T Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~L~~~lk~~kpDIVH~h~~~a~~lg~lA-a~~~---gvPvIv~t~h 432 (694)
T PRK15179 357 SDMQAWGGCEFSSLLAPYREYLRFLPKQIIEGTTKLTDVMRSSVPSVVHIWQDGSIFACALA-ALLA---GVPRIVLSVR 432 (694)
T ss_pred ccCCccCcccccccchhhHHHhhhcchhHHHHHHHHHHHHHHcCCcEEEEeCCcHHHHHHHH-HHHc---CCCEEEEEeC
Confidence 123345566789999999987664432222 2111 234444 456
Q ss_pred ccccccchhhh----h---hcccccccccccccccHHHHHHhHHHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHH
Q 011954 186 EMRGHYFKLEY----V---KHLPFVAGAMIDSYTTAEYWKNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLRE 258 (474)
Q Consensus 186 ~~~~~~~~~~~----~---~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~ 258 (474)
..........+ . ..+...+..+ ....++..++.+.+.++++.+++.|||||||.+.|.+.+.... .+.
T Consensus 433 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~i--~Vs~S~~~~~~l~~~~g~~~~kI~VI~NGVd~~~f~~~~~~~~---~~~ 507 (694)
T PRK15179 433 TMPPVDRPDRYRVEYDIIYSELLKMRGVA--LSSNSQFAAHRYADWLGVDERRIPVVYNGLAPLKSVQDDACTA---MMA 507 (694)
T ss_pred CCccccchhHHHHHHHHHHHHHHhcCCeE--EEeCcHHHHHHHHHHcCCChhHEEEECCCcCHHhcCCCchhhH---HHH
Confidence 53221111111 1 1111122221 1222333444455567888899999999999988764322100 001
Q ss_pred HHHHhcCCCCCCEEEEEecccccCcchHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCC
Q 011954 259 HVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQ 338 (474)
Q Consensus 259 ~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~ 338 (474)
.++ ...+++.++|+++||+.+.||++.+++|++++.+ ++++++|+|+|+|+ ..+.++++++++++.
T Consensus 508 ~~~--~~~~~~~~vIg~VGRL~~~KG~~~LI~A~a~l~~-------~~p~~~LvIvG~G~-----~~~~L~~l~~~lgL~ 573 (694)
T PRK15179 508 QFD--ARTSDARFTVGTVMRVDDNKRPFLWVEAAQRFAA-------SHPKVRFIMVGGGP-----LLESVREFAQRLGMG 573 (694)
T ss_pred hhc--cccCCCCeEEEEEEeCCccCCHHHHHHHHHHHHH-------HCcCeEEEEEccCc-----chHHHHHHHHHcCCC
Confidence 111 2234567899999999999999999999998876 45899999999996 788999999999999
Q ss_pred CeEEEecCCCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCcceeeeeCCceeeecCCCCChHHHHH
Q 011954 339 DHVHFVNKTLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLAN 418 (474)
Q Consensus 339 ~~v~~~g~~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~~e~v~~~~~G~l~~~~d~~~~~la~ 418 (474)
++|+|+|+++++..+|+.+|++|+||. .||||++++|||+||+|||+|++||++|+|.++.+|++++++|.+++++++
T Consensus 574 ~~V~flG~~~dv~~ll~aaDv~VlpS~--~Egfp~vlLEAMA~G~PVVat~~gG~~EiV~dg~~GlLv~~~d~~~~~La~ 651 (694)
T PRK15179 574 ERILFTGLSRRVGYWLTQFNAFLLLSR--FEGLPNVLIEAQFSGVPVVTTLAGGAGEAVQEGVTGLTLPADTVTAPDVAE 651 (694)
T ss_pred CcEEEcCCcchHHHHHHhcCEEEeccc--cccchHHHHHHHHcCCeEEEECCCChHHHccCCCCEEEeCCCCCChHHHHH
Confidence 999999999999999999999999998 899999999999999999999999999999999999999988844579999
Q ss_pred HHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 011954 419 NIVKLATHVERRLTMGKKGYERVKDRFLEHHMSQRIALVLR 459 (474)
Q Consensus 419 ~i~~ll~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~ 459 (474)
+|.+++.+......+++++++++.++|||+.++++++++|+
T Consensus 652 aL~~ll~~l~~~~~l~~~ar~~a~~~FS~~~~~~~~~~lY~ 692 (694)
T PRK15179 652 ALARIHDMCAADPGIARKAADWASARFSLNQMIASTVRCYQ 692 (694)
T ss_pred HHHHHHhChhccHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 99998887766778899999999999999999999999995
|
|
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-43 Score=346.32 Aligned_cols=352 Identities=14% Similarity=0.154 Sum_probs=243.0
Q ss_pred CChhHHHHHHHHHHHhcCc--EEEEEeCCCCCCc--hhhhhhcccchhccceeeeehh---------------------c
Q 011954 87 SGGPLLLMELAFLLRGVGA--EVVWITNQKPNEP--DEVIYSLEHKMLDRGVQVLSAK---------------------G 141 (474)
Q Consensus 87 gG~~~~~~~l~~~L~~~G~--~V~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~---------------------~ 141 (474)
||+++++.+|+++|.++|| +|+|+|...+... ......... ...|+.+.... .
T Consensus 26 GG~~~~v~~La~~L~~~G~~~~V~v~t~~~~~~~~~~~~~~~~~~--~~~gv~v~r~~~~~~~~~~~~~~~~~~~~~~~~ 103 (439)
T TIGR02472 26 GGQTKYVLELARALARRSEVEQVDLVTRLIKDAKVSPDYAQPIER--IAPGARIVRLPFGPRRYLRKELLWPYLDELADN 103 (439)
T ss_pred CCcchHHHHHHHHHHhCCCCcEEEEEeccccCcCCCCccCCCeeE--eCCCcEEEEecCCCCCCcChhhhhhhHHHHHHH
Confidence 8889999999999999997 9999995422110 000000110 11233332211 1
Q ss_pred HHHHhhh--cCCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccccchh---------h-------------hh
Q 011954 142 EKAINTA--LNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYFKL---------E-------------YV 197 (474)
Q Consensus 142 ~~~~~~~--~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~---------~-------------~~ 197 (474)
...+.+. .+|||||+|+..++.. ...+... ...|++.+.|+........ . ..
T Consensus 104 l~~~~~~~~~~~DvIH~h~~~~~~~-~~~~~~~---~~~p~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (439)
T TIGR02472 104 LLQHLRQQGHLPDLIHAHYADAGYV-GARLSRL---LGVPLIFTGHSLGREKRRRLLAAGLKPQQIEKQYNISRRIEAEE 179 (439)
T ss_pred HHHHHHHcCCCCCEEEEcchhHHHH-HHHHHHH---hCCCEEEecccccchhhhhcccCCCChhhhhhhcchHHHHHHHH
Confidence 2222332 3699999997654433 2222222 2358899999742211000 0 01
Q ss_pred hcccccccccccccccHHHHHHhHHHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEec
Q 011954 198 KHLPFVAGAMIDSYTTAEYWKNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIIN 277 (474)
Q Consensus 198 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vg 277 (474)
..+...+.+++.+. ....+.+....+++++++.|||||+|.+.|.+..........+. .++.++.+++.++|+++|
T Consensus 180 ~~~~~ad~ii~~s~---~~~~~~~~~~~~~~~~ki~vIpnGvd~~~f~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~vG 255 (439)
T TIGR02472 180 ETLAHASLVITSTH---QEIEEQYALYDSYQPERMQVIPPGVDLSRFYPPQSSEETSEIDN-LLAPFLKDPEKPPILAIS 255 (439)
T ss_pred HHHHhCCEEEECCH---HHHHHHHHhccCCCccceEEECCCcChhhcCCCCccccchhHHH-HHHhhccccCCcEEEEEc
Confidence 12234444444332 22222222223677889999999999998876532211111112 223345556678999999
Q ss_pred ccccCcchHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCc------hHHHHHHHHHHHcCCCCeEEEecC--CCC
Q 011954 278 SVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQT------KFETELRNFVAEKKIQDHVHFVNK--TLT 349 (474)
Q Consensus 278 rl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~------~~~~~l~~~~~~~~l~~~v~~~g~--~~~ 349 (474)
|+.+.||++.+++|++++.+ ++ ..+++. +|+|+|+.... ++.+++.++++++++.++|+|+|+ .++
T Consensus 256 rl~~~Kg~~~li~A~~~l~~-~~----~~~~l~-li~G~g~~~~~l~~~~~~~~~~~~~~~~~~~l~~~V~f~g~~~~~~ 329 (439)
T TIGR02472 256 RPDRRKNIPSLVEAYGRSPK-LQ----EMANLV-LVLGCRDDIRKMESQQREVLQKVLLLIDRYDLYGKVAYPKHHRPDD 329 (439)
T ss_pred CCcccCCHHHHHHHHHhChh-hh----hhccEE-EEeCCccccccccHHHHHHHHHHHHHHHHcCCCceEEecCCCCHHH
Confidence 99999999999999986522 11 113333 36787753221 123446677889999999999996 478
Q ss_pred hHHHHhcC----CEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCcceeeeeCCceeeecCCCCChHHHHHHHHHHhh
Q 011954 350 VSPYLASI----DVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLAT 425 (474)
Q Consensus 350 ~~~~~~~a----dv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~ 425 (474)
+.++|+.| |+||+||. .|+||++++||||||+|||+|+.||++|++.++.+|++++++| +++|+++|.++++
T Consensus 330 ~~~~~~~a~~~~Dv~v~pS~--~E~fg~~~lEAma~G~PvV~s~~gg~~eiv~~~~~G~lv~~~d--~~~la~~i~~ll~ 405 (439)
T TIGR02472 330 VPELYRLAARSRGIFVNPAL--TEPFGLTLLEAAACGLPIVATDDGGPRDIIANCRNGLLVDVLD--LEAIASALEDALS 405 (439)
T ss_pred HHHHHHHHhhcCCEEecccc--cCCcccHHHHHHHhCCCEEEeCCCCcHHHhcCCCcEEEeCCCC--HHHHHHHHHHHHh
Confidence 99999977 99999999 8999999999999999999999999999999999999999999 9999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 011954 426 HVERRLTMGKKGYERVKDRFLEHHMSQRIALVL 458 (474)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~ 458 (474)
|++.+++|++++++++.++|||+.++++|++++
T Consensus 406 ~~~~~~~~~~~a~~~~~~~fsw~~~~~~~~~l~ 438 (439)
T TIGR02472 406 DSSQWQLWSRNGIEGVRRHYSWDAHVEKYLRIL 438 (439)
T ss_pred CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 999999999999999999999999999999876
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. |
| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-43 Score=344.22 Aligned_cols=357 Identities=15% Similarity=0.079 Sum_probs=263.7
Q ss_pred CEEEEEecCCCC--CChhHHHHHHHHHHHhcCcEEEEEeCCCCCCch----hhhhhcccchhccceeeeehh--------
Q 011954 75 KLVLLVSHELSL--SGGPLLLMELAFLLRGVGAEVVWITNQKPNEPD----EVIYSLEHKMLDRGVQVLSAK-------- 140 (474)
Q Consensus 75 ~kIl~v~~~~~~--gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-------- 140 (474)
|||++++..+.| ||++.++.+|+++|.+.||+|+|+|........ .............++.+...+
T Consensus 1 mkIlii~~~~~P~~~g~~~~~~~l~~~L~~~G~~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~r~~~~~~~~~~ 80 (412)
T PRK10307 1 MKILVYGINYAPELTGIGKYTGEMAEWLAARGHEVRVITAPPYYPQWRVGEGYSAWRYRRESEGGVTVWRCPLYVPKQPS 80 (412)
T ss_pred CeEEEEecCCCCCccchhhhHHHHHHHHHHCCCeEEEEecCCCCCCCCCCcccccccceeeecCCeEEEEccccCCCCcc
Confidence 789999987655 888999999999999999999999965221100 000000000011233332211
Q ss_pred ---c-----------HHHHhh--hcCCCEEEEcccchhh-HHhHHhhhcccccccceeeeeecccccc------ch-h--
Q 011954 141 ---G-----------EKAINT--ALNADLVVLNTAVAGK-WLDGVLKDKVSQVLPKVLWWIHEMRGHY------FK-L-- 194 (474)
Q Consensus 141 ---~-----------~~~~~~--~~~~DiV~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~h~~~~~~------~~-~-- 194 (474)
. ...+.+ ..+||+||+|.+.... .....+... ...|+++++|+..... .. .
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Div~~~~p~~~~~~~~~~~~~~---~~~~~v~~~~d~~~~~~~~~~~~~~~~~ 157 (412)
T PRK10307 81 GLKRLLHLGSFALSSFFPLLAQRRWRPDRVIGVVPTLFCAPGARLLARL---SGARTWLHIQDYEVDAAFGLGLLKGGKV 157 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCCCEEEEeCCcHHHHHHHHHHHHh---hCCCEEEEeccCCHHHHHHhCCccCcHH
Confidence 0 011111 2689999999754321 112222211 2246777787643210 00 0
Q ss_pred ------hhhhcccccccccccccccHHHHHHhHHHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCC
Q 011954 195 ------EYVKHLPFVAGAMIDSYTTAEYWKNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRD 268 (474)
Q Consensus 195 ------~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 268 (474)
.....++.++.+++.|....+.+. .++.+..++.+||||+|.+.|.+.... .+..+++++++++
T Consensus 158 ~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~-----~~~~~~~~i~vi~ngvd~~~~~~~~~~-----~~~~~~~~~~~~~ 227 (412)
T PRK10307 158 ARLATAFERSLLRRFDNVSTISRSMMNKAR-----EKGVAAEKVIFFPNWSEVARFQPVADA-----DVDALRAQLGLPD 227 (412)
T ss_pred HHHHHHHHHHHHhhCCEEEecCHHHHHHHH-----HcCCCcccEEEECCCcCHhhcCCCCcc-----chHHHHHHcCCCC
Confidence 011223456666666666655543 346777899999999999888654321 1345788899988
Q ss_pred CCEEEEEecccccCcchHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCC-
Q 011954 269 DDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKT- 347 (474)
Q Consensus 269 ~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~- 347 (474)
++++++|+|++.+.||++.+++|++++. +.++++|+|+|+|+ ..++++++++++++. +|+|+|++
T Consensus 228 ~~~~i~~~G~l~~~kg~~~li~a~~~l~--------~~~~~~l~ivG~g~-----~~~~l~~~~~~~~l~-~v~f~G~~~ 293 (412)
T PRK10307 228 GKKIVLYSGNIGEKQGLELVIDAARRLR--------DRPDLIFVICGQGG-----GKARLEKMAQCRGLP-NVHFLPLQP 293 (412)
T ss_pred CCEEEEEcCccccccCHHHHHHHHHHhc--------cCCCeEEEEECCCh-----hHHHHHHHHHHcCCC-ceEEeCCCC
Confidence 8899999999999999999999998763 23789999999996 678899999999986 79999975
Q ss_pred -CChHHHHhcCCEEEEcCCCCCCC----CchHHHHHHhcCCCEEEcCCCC--cceeeeeCCceeeecCCCCChHHHHHHH
Q 011954 348 -LTVSPYLASIDVLVQNSQARGEC----FGRITIEAMAFQLPVLGTAAGG--TMEIVVNGTTGLLHPTGKEGVTPLANNI 420 (474)
Q Consensus 348 -~~~~~~~~~adv~v~ps~~~~E~----~~~~~~EAma~G~PvI~s~~~g--~~e~v~~~~~G~l~~~~d~~~~~la~~i 420 (474)
+++.++|+.||++|+||. .|+ +|.+++|||+||+|||+|+.|| ..|++. ++|++++++| +++++++|
T Consensus 294 ~~~~~~~~~~aDi~v~ps~--~e~~~~~~p~kl~eama~G~PVi~s~~~g~~~~~~i~--~~G~~~~~~d--~~~la~~i 367 (412)
T PRK10307 294 YDRLPALLKMADCHLLPQK--AGAADLVLPSKLTNMLASGRNVVATAEPGTELGQLVE--GIGVCVEPES--VEALVAAI 367 (412)
T ss_pred HHHHHHHHHhcCEeEEeec--cCcccccCcHHHHHHHHcCCCEEEEeCCCchHHHHHh--CCcEEeCCCC--HHHHHHHH
Confidence 689999999999999998 677 5778999999999999999887 458885 5999999999 99999999
Q ss_pred HHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhh
Q 011954 421 VKLATHVERRLTMGKKGYERVKDRFLEHHMSQRIALVLREVLQY 464 (474)
Q Consensus 421 ~~ll~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~~ 464 (474)
.++++|++.+++|++++++++.++|||+.++++++++|++++++
T Consensus 368 ~~l~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~ 411 (412)
T PRK10307 368 AALARQALLRPKLGTVAREYAERTLDKENVLRQFIADIRGLVAE 411 (412)
T ss_pred HHHHhCHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999865
|
|
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-42 Score=342.20 Aligned_cols=344 Identities=21% Similarity=0.249 Sum_probs=257.4
Q ss_pred CCChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhcccchhccceeeeeh----------------------hcHH
Q 011954 86 LSGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEHKMLDRGVQVLSA----------------------KGEK 143 (474)
Q Consensus 86 ~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~ 143 (474)
.||+++++.+|+++|.++||+|+|+|........... .. ..++.+... ...+
T Consensus 19 ~GG~e~~v~~la~~L~~~G~~V~v~~~~~~~~~~~~~-~~-----~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (405)
T TIGR03449 19 AGGMNVYILETATELARRGIEVDIFTRATRPSQPPVV-EV-----APGVRVRNVVAGPYEGLDKEDLPTQLCAFTGGVLR 92 (405)
T ss_pred CCCceehHHHHHHHHhhCCCEEEEEecccCCCCCCcc-cc-----CCCcEEEEecCCCcccCCHHHHHHHHHHHHHHHHH
Confidence 4888999999999999999999999964322111000 00 011111110 0011
Q ss_pred HHhh--hcCCCEEEEcccchhhHHhHHhhhcccccccceeeeeecccccc---c------h---hhh--hhccccccccc
Q 011954 144 AINT--ALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHY---F------K---LEY--VKHLPFVAGAM 207 (474)
Q Consensus 144 ~~~~--~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~---~------~---~~~--~~~~~~~~~~~ 207 (474)
.+.+ ..+||+||+|....+. +...+... ...|++.++|+..... + . ..+ ...+..++.++
T Consensus 93 ~~~~~~~~~~Diih~h~~~~~~-~~~~~~~~---~~~p~v~t~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~d~vi 168 (405)
T TIGR03449 93 AEARHEPGYYDLIHSHYWLSGQ-VGWLLRDR---WGVPLVHTAHTLAAVKNAALADGDTPEPEARRIGEQQLVDNADRLI 168 (405)
T ss_pred HHhhccCCCCCeEEechHHHHH-HHHHHHHh---cCCCEEEeccchHHHHHHhccCCCCCchHHHHHHHHHHHHhcCeEE
Confidence 1122 2479999999744432 22222221 2357889999753110 0 0 000 11234455555
Q ss_pred ccccccHHHHHHhHHHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHH
Q 011954 208 IDSYTTAEYWKNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDL 287 (474)
Q Consensus 208 ~~s~~~~~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~ 287 (474)
+.+.... +.+...++.+..++.+||||+|.+.|.+.. +...++++++++++++|+++||+.+.||++.
T Consensus 169 ~~s~~~~----~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~G~l~~~K~~~~ 236 (405)
T TIGR03449 169 ANTDEEA----RDLVRHYDADPDRIDVVAPGADLERFRPGD--------RATERARLGLPLDTKVVAFVGRIQPLKAPDV 236 (405)
T ss_pred ECCHHHH----HHHHHHcCCChhhEEEECCCcCHHHcCCCc--------HHHHHHhcCCCCCCcEEEEecCCCcccCHHH
Confidence 5554433 334445677778999999999998886542 3446778888888899999999999999999
Q ss_pred HHHHHHHHHHHHHHhccCCCc--EEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCC--CChHHHHhcCCEEEEc
Q 011954 288 FLHSFYESLQLIREKKLQVPS--MHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKT--LTVSPYLASIDVLVQN 363 (474)
Q Consensus 288 ll~a~~~l~~~~~~~~~~~~~--~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~--~~~~~~~~~adv~v~p 363 (474)
+++|+.++.+ +.++ ++|+|+|++..+..+..++++++++++++.++|+|+|+. +++.++|+.||++++|
T Consensus 237 li~a~~~l~~-------~~~~~~~~l~ivG~~~~~g~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~ad~~v~p 309 (405)
T TIGR03449 237 LLRAVAELLD-------RDPDRNLRVIVVGGPSGSGLATPDALIELAAELGIADRVRFLPPRPPEELVHVYRAADVVAVP 309 (405)
T ss_pred HHHHHHHHHh-------hCCCcceEEEEEeCCCCCcchHHHHHHHHHHHcCCCceEEECCCCCHHHHHHHHHhCCEEEEC
Confidence 9999998865 3355 999999964322213667899999999999999999975 7899999999999999
Q ss_pred CCCCCCCCchHHHHHHhcCCCEEEcCCCCcceeeeeCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHH
Q 011954 364 SQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKD 443 (474)
Q Consensus 364 s~~~~E~~~~~~~EAma~G~PvI~s~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~ 443 (474)
|. .|+||++++|||++|+|||+++.||..|++.++.+|++++++| +++++++|.+++++++.+++|++++++.+ +
T Consensus 310 s~--~E~~g~~~lEAma~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d--~~~la~~i~~~l~~~~~~~~~~~~~~~~~-~ 384 (405)
T TIGR03449 310 SY--NESFGLVAMEAQACGTPVVAARVGGLPVAVADGETGLLVDGHD--PADWADALARLLDDPRTRIRMGAAAVEHA-A 384 (405)
T ss_pred CC--CCCcChHHHHHHHcCCCEEEecCCCcHhhhccCCceEECCCCC--HHHHHHHHHHHHhCHHHHHHHHHHHHHHH-H
Confidence 98 8999999999999999999999999999999999999999988 99999999999999999999999999987 5
Q ss_pred hcCHHHHHHHHHHHHHHHHh
Q 011954 444 RFLEHHMSQRIALVLREVLQ 463 (474)
Q Consensus 444 ~fs~~~~~~~~~~~~~~~~~ 463 (474)
+|||+.+++++.++|.+++.
T Consensus 385 ~fsw~~~~~~~~~~y~~~~~ 404 (405)
T TIGR03449 385 GFSWAATADGLLSSYRDALA 404 (405)
T ss_pred hCCHHHHHHHHHHHHHHHhh
Confidence 69999999999999998763
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. |
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-42 Score=334.55 Aligned_cols=353 Identities=19% Similarity=0.179 Sum_probs=254.7
Q ss_pred EEEEEecCCCCCChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhcccchhccceeeeehh---cH----HH----
Q 011954 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEHKMLDRGVQVLSAK---GE----KA---- 144 (474)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~----~~---- 144 (474)
||+++++.+..||+++++.+++++|.+.||+|++++.................+....+. .+.. .. ..
T Consensus 1 ki~~~~~~~~~GGv~~~~~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~ 79 (372)
T cd03792 1 KVLHVNSTPYGGGVAEILHSLVPLMRDLGVDTRWEVIKGDPEFFNVTKKFHNALQGADIE-LSEEEKEIYLEWNEENAER 79 (372)
T ss_pred CeEEEeCCCCCCcHHHHHHHHHHHHHHcCCCceEEecCCChhHHHHHHHhhHhhcCCCCC-CCHHHHHHHHHHHHHHhcc
Confidence 599999988889999999999999999999999998754432211111111111111111 1110 00 11
Q ss_pred HhhhcCCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccccchhhh---hhcccccccccccccccHHHHHHhH
Q 011954 145 INTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYFKLEY---VKHLPFVAGAMIDSYTTAEYWKNRT 221 (474)
Q Consensus 145 ~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~---~~~~~~~~~~~~~s~~~~~~~~~~~ 221 (474)
.....+||+||+|++....+ ..... ....|++++.|..........+ ...+..++..++.+ .++..
T Consensus 80 ~~~~~~~Dvv~~h~~~~~~~-~~~~~----~~~~~~i~~~H~~~~~~~~~~~~~~~~~~~~~d~~i~~~---~~~~~--- 148 (372)
T cd03792 80 PLLDLDADVVVIHDPQPLAL-PLFKK----KRGRPWIWRCHIDLSSPNRRVWDFLQPYIEDYDAAVFHL---PEYVP--- 148 (372)
T ss_pred ccccCCCCEEEECCCCchhH-HHhhh----cCCCeEEEEeeeecCCCcHHHHHHHHHHHHhCCEEeecH---HHhcC---
Confidence 12246899999998764322 11111 1135788889975433221111 12223344433333 22221
Q ss_pred HHHhcCCCCCeEEEeCCCCccccc-hhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHHHHHHHHHHHHHHH
Q 011954 222 RERLGIRMPETYVVHLGNSKDLMD-IAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIR 300 (474)
Q Consensus 222 ~~~~~~~~~ki~vi~ngvd~~~~~-~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~ 300 (474)
.+++..++ +||||+|..... .... ......+++++++++++++|+++||+.+.||++.+++|++.+.+
T Consensus 149 ---~~~~~~~~-vipngvd~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~--- 217 (372)
T cd03792 149 ---PQVPPRKV-IIPPSIDPLSGKNRELS----PADIEYILEKYGIDPERPYITQVSRFDPWKDPFGVIDAYRKVKE--- 217 (372)
T ss_pred ---CCCCCceE-EeCCCCCCCccccCCCC----HHHHHHHHHHhCCCCCCcEEEEEeccccccCcHHHHHHHHHHHh---
Confidence 23444555 999999975311 1111 11145678889998889999999999999999999999998865
Q ss_pred HhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCC----CChHHHHhcCCEEEEcCCCCCCCCchHHH
Q 011954 301 EKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKT----LTVSPYLASIDVLVQNSQARGECFGRITI 376 (474)
Q Consensus 301 ~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~----~~~~~~~~~adv~v~ps~~~~E~~~~~~~ 376 (474)
+.++++|+|+|+|+...++..+.++++.+..++.++|.|+|.. +++..+|+.||++++||. .||||++++
T Consensus 218 ----~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ad~~v~~s~--~Eg~g~~~l 291 (372)
T cd03792 218 ----RVPDPQLVLVGSGATDDPEGWIVYEEVLEYAEGDPDIHVLTLPPVSDLEVNALQRASTVVLQKSI--REGFGLTVT 291 (372)
T ss_pred ----hCCCCEEEEEeCCCCCCchhHHHHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHhCeEEEeCCC--ccCCCHHHH
Confidence 3478999999999755444455566666677888899999864 678999999999999998 899999999
Q ss_pred HHHhcCCCEEEcCCCCcceeeeeCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Q 011954 377 EAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRFLEHHMSQRIAL 456 (474)
Q Consensus 377 EAma~G~PvI~s~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~ 456 (474)
|||+||+|||+|+.+|..+++.++.+|+++++ .++++++|.+++++++.+++|++++++.+.++|+|+.++++|++
T Consensus 292 EA~a~G~Pvv~s~~~~~~~~i~~~~~g~~~~~----~~~~a~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~ 367 (372)
T cd03792 292 EALWKGKPVIAGPVGGIPLQIEDGETGFLVDT----VEEAAVRILYLLRDPELRRKMGANAREHVRENFLITRHLKDYLY 367 (372)
T ss_pred HHHHcCCCEEEcCCCCchhhcccCCceEEeCC----cHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHcCHHHHHHHHHH
Confidence 99999999999999999999999999999874 57899999999999999999999999999999999999999999
Q ss_pred HHHHH
Q 011954 457 VLREV 461 (474)
Q Consensus 457 ~~~~~ 461 (474)
+|+++
T Consensus 368 ~~~~~ 372 (372)
T cd03792 368 LISKL 372 (372)
T ss_pred HHHhC
Confidence 99863
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. |
| >PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-42 Score=329.12 Aligned_cols=348 Identities=18% Similarity=0.171 Sum_probs=249.5
Q ss_pred EEEEEecCCCCCChhHHHH----HHHHHHHhcCc--------EEEEEeC----CCCCCchhhhhhcccchhccceeee--
Q 011954 76 LVLLVSHELSLSGGPLLLM----ELAFLLRGVGA--------EVVWITN----QKPNEPDEVIYSLEHKMLDRGVQVL-- 137 (474)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~----~l~~~L~~~G~--------~V~v~~~----~~~~~~~~~~~~~~~~~~~~~~~~~-- 137 (474)
.|++++..+..||+|+.+. +++++.++.|- -|.++|. ..+.+++ ...+...++.+.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 236 (578)
T PRK15490 163 RLALCTGSLGSGGAERQISRLAIEIARKYRQKGKIGGLKVEEPVELIIRSLTPELRQDFF------LKEVLEEQVEVLEI 236 (578)
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHHhcccccccccccceeEEEeecCcccCcchh------HHHHHhcCCceEEe
Confidence 4999999999999999888 55555555543 4777772 2222111 111111111111
Q ss_pred -------------------------------ehhcHHHHhhhcCCCEEEEcccchhhHHhHHhhhcccccccce-eeeee
Q 011954 138 -------------------------------SAKGEKAINTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKV-LWWIH 185 (474)
Q Consensus 138 -------------------------------~~~~~~~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~h 185 (474)
.......+.+..+||+||+|...+..+... ... +. ..|+ +.+.|
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ir~~rpDIVHt~~~~a~l~g~l-aA~-la--gvpviv~~~h 312 (578)
T PRK15490 237 AKITGNLFDDATIESPELRLLLSHLPPVCKYGIKHLVPHLCERKLDYLSVWQDGACLMIAL-AAL-IA--GVPRIQLGLR 312 (578)
T ss_pred eccchhhhhhccccchHHHHHHhcCChHHHHHHHHHHHHHHHcCCCEEEEcCcccHHHHHH-HHH-hc--CCCEEEEeec
Confidence 112344566779999999998654333111 111 11 2344 44455
Q ss_pred ccccccchhhhhh---c-------ccccccccccccccHHHHHHhHHHHhcCCCCCeEEEeCCCCccccchhhhhHHHHH
Q 011954 186 EMRGHYFKLEYVK---H-------LPFVAGAMIDSYTTAEYWKNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRV 255 (474)
Q Consensus 186 ~~~~~~~~~~~~~---~-------~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~ 255 (474)
............. . .+..+ .+..+..+ ++.+.+.++++++|+.|||||+|.+.|.+.....
T Consensus 313 ~~~~~~~~r~~~~e~~~~~~a~~i~~~sd-~v~~s~~v----~~~l~~~lgip~~KI~VIyNGVD~~rf~p~~~~~---- 383 (578)
T PRK15490 313 GLPPVVRKRLFKPEYEPLYQALAVVPGVD-FMSNNHCV----TRHYADWLKLEAKHFQVVYNGVLPPSTEPSSEVP---- 383 (578)
T ss_pred ccCCcchhhHHHHHHHHhhhhceeEecch-hhhccHHH----HHHHHHHhCCCHHHEEEEeCCcchhhcCccchhh----
Confidence 4221111111100 0 11111 33344444 3445556788999999999999999887653211
Q ss_pred hHHHHHH--hcCCCCCCEEEEEecccccCcchHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHH
Q 011954 256 LREHVRE--SLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVA 333 (474)
Q Consensus 256 ~~~~~r~--~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~ 333 (474)
...++ ..+++++.++++++||+.+.||+..+++++.++.+ +.++++|+|+|+|+ ..++++++++
T Consensus 384 --~~~r~~~~~~l~~~~~vIg~VgRl~~~Kg~~~LI~A~a~llk-------~~pdirLvIVGdG~-----~~eeLk~la~ 449 (578)
T PRK15490 384 --HKIWQQFTQKTQDADTTIGGVFRFVGDKNPFAWIDFAARYLQ-------HHPATRFVLVGDGD-----LRAEAQKRAE 449 (578)
T ss_pred --HHHHHHhhhccCCCCcEEEEEEEEehhcCHHHHHHHHHHHHh-------HCCCeEEEEEeCch-----hHHHHHHHHH
Confidence 11222 23345666889999999999999999999988765 34899999999996 7889999999
Q ss_pred HcCCCCeEEEecCCCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCcceeeeeCCceeeecCCCCCh
Q 011954 334 EKKIQDHVHFVNKTLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGV 413 (474)
Q Consensus 334 ~~~l~~~v~~~g~~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~~e~v~~~~~G~l~~~~d~~~ 413 (474)
++++.++|+|+|+.+++..+|+.+|+||+||. .||||++++|||+||+|||+|++||..|+|.++.+|++++++| +
T Consensus 450 elgL~d~V~FlG~~~Dv~~~LaaADVfVlPS~--~EGfp~vlLEAMA~GlPVVATdvGG~~EiV~dG~nG~LVp~~D--~ 525 (578)
T PRK15490 450 QLGILERILFVGASRDVGYWLQKMNVFILFSR--YEGLPNVLIEAQMVGVPVISTPAGGSAECFIEGVSGFILDDAQ--T 525 (578)
T ss_pred HcCCCCcEEECCChhhHHHHHHhCCEEEEccc--ccCccHHHHHHHHhCCCEEEeCCCCcHHHcccCCcEEEECCCC--h
Confidence 99999999999999999999999999999998 8999999999999999999999999999999999999999998 8
Q ss_pred HHHHHHH---HHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 011954 414 TPLANNI---VKLATHVERRLTMGKKGYERVKDRFLEHHMSQRIALVLRE 460 (474)
Q Consensus 414 ~~la~~i---~~ll~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~ 460 (474)
+++++++ ..+.+..+.+..|++++++++.++|||+.++++|.++|.+
T Consensus 526 ~aLa~ai~lA~aL~~ll~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 526 VNLDQACRYAEKLVNLWRSRTGICQQTQSFLQERFTVEHMVGTFVKTIAS 575 (578)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHh
Confidence 8888877 4445555556679999999999999999999999999975
|
|
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-42 Score=341.47 Aligned_cols=365 Identities=20% Similarity=0.190 Sum_probs=261.5
Q ss_pred CEEEEEecCCCC----CChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhh--------cc-------c---chhcc
Q 011954 75 KLVLLVSHELSL----SGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYS--------LE-------H---KMLDR 132 (474)
Q Consensus 75 ~kIl~v~~~~~~----gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~--------~~-------~---~~~~~ 132 (474)
|||++++.+..| ||...++..|+++|+++||+|.|+++.++......... +. . .....
T Consensus 1 m~i~~vs~E~~P~~k~GGl~~~v~~L~~aL~~~G~~v~v~~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (473)
T TIGR02095 1 MRVLFVAAEMAPFAKTGGLADVVGALPKALAALGHDVRVLLPAYGCIEDEVDDQVKVVELVDLSVGPRTLYVKVFEGVVE 80 (473)
T ss_pred CeEEEEEeccccccCcCcHHHHHHHHHHHHHHcCCeEEEEecCCcChhhhhccCeEEEEEEEEeecCceeEEEEEEEEEC
Confidence 789999998544 88899999999999999999999998765432211000 00 0 00001
Q ss_pred ceeeeeh-------------------h---------cHHHHh--hhcCCCEEEEcccchhhHHhHHhhhcccccccceee
Q 011954 133 GVQVLSA-------------------K---------GEKAIN--TALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLW 182 (474)
Q Consensus 133 ~~~~~~~-------------------~---------~~~~~~--~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 182 (474)
++.++.. . ....+. ...+|||||+|+..++.... .++........|+++
T Consensus 81 ~v~~~~i~~~~~~~r~~~~y~~~~~d~~~r~~~f~~a~~~~~~~~~~~~DiiH~hdw~~~~~~~-~l~~~~~~~~~~~v~ 159 (473)
T TIGR02095 81 GVPVYFIDNPSLFDRPGGIYGDDYPDNAERFAFFSRAAAELLSGLGWQPDVVHAHDWHTALVPA-LLKAVYRPNPIKTVF 159 (473)
T ss_pred CceEEEEECHHHcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCEEEECCcHHHHHHH-HHHhhccCCCCCEEE
Confidence 1111100 0 000111 12689999999865554333 232222111268999
Q ss_pred eeeccccc-cchhh-------------------------hhhcccccccccccccccHHHHHHh-----HHHHhcCCCCC
Q 011954 183 WIHEMRGH-YFKLE-------------------------YVKHLPFVAGAMIDSYTTAEYWKNR-----TRERLGIRMPE 231 (474)
Q Consensus 183 ~~h~~~~~-~~~~~-------------------------~~~~~~~~~~~~~~s~~~~~~~~~~-----~~~~~~~~~~k 231 (474)
++|+.... .+... ....+..++.++++|....+.+... +...+.....+
T Consensus 160 TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v~tVS~~~~~ei~~~~~~~~l~~~l~~~~~k 239 (473)
T TIGR02095 160 TIHNLAYQGVFPADDFSELGLPPEYFHMEGLEFYGRVNFLKGGIVYADRVTTVSPTYAREILTPEFGYGLDGVLKARSGK 239 (473)
T ss_pred EcCCCccCCcCCHHHHHHcCCChHHcCchhhhcCCchHHHHHHHHhCCcCeecCHhHHHHhcCCcCCccchhHHHhcCCC
Confidence 99986421 11110 0112345566666666665554321 00011224578
Q ss_pred eEEEeCCCCccccchhhhhH-----------HHHHhHHHHHHhcCCCC--CCEEEEEecccccCcchHHHHHHHHHHHHH
Q 011954 232 TYVVHLGNSKDLMDIAEDSV-----------ARRVLREHVRESLGVRD--DDLLFAIINSVSRGKGQDLFLHSFYESLQL 298 (474)
Q Consensus 232 i~vi~ngvd~~~~~~~~~~~-----------~~~~~~~~~r~~~~~~~--~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~ 298 (474)
+.+|+||+|.+.|.|..+.. .+...+..+++++|++. +.++|+++||+.++||++.+++|+.++.+
T Consensus 240 i~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~- 318 (473)
T TIGR02095 240 LRGILNGIDTEVWNPATDPYLKANYSADDLAGKAENKEALQEELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLE- 318 (473)
T ss_pred eEEEeCCCCccccCCCCCcccccCcCccchhhhhhhHHHHHHHcCCCccCCCCEEEEEecCccccChHHHHHHHHHHHH-
Confidence 99999999999988653311 12233567899999976 67899999999999999999999998865
Q ss_pred HHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCC--CChHHHHhcCCEEEEcCCCCCCCCchHHH
Q 011954 299 IREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKT--LTVSPYLASIDVLVQNSQARGECFGRITI 376 (474)
Q Consensus 299 ~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~--~~~~~~~~~adv~v~ps~~~~E~~~~~~~ 376 (474)
.+++|+|+|+|+ +++.+++++++.+++ +++.+.+.. +++..+|+.||++|+||. .|+||++++
T Consensus 319 --------~~~~lvi~G~g~---~~~~~~l~~~~~~~~--~~v~~~~~~~~~~~~~~~~~aDv~l~pS~--~E~~gl~~l 383 (473)
T TIGR02095 319 --------LGGQLVVLGTGD---PELEEALRELAERYP--GNVRVIIGYDEALAHLIYAGADFILMPSR--FEPCGLTQL 383 (473)
T ss_pred --------cCcEEEEECCCC---HHHHHHHHHHHHHCC--CcEEEEEcCCHHHHHHHHHhCCEEEeCCC--cCCcHHHHH
Confidence 469999999984 236778888887765 567776643 457789999999999999 899999999
Q ss_pred HHHhcCCCEEEcCCCCcceeeeeC------CceeeecCCCCChHHHHHHHHHHhh----CHHHHHHHHHHHHHHHHHhcC
Q 011954 377 EAMAFQLPVLGTAAGGTMEIVVNG------TTGLLHPTGKEGVTPLANNIVKLAT----HVERRLTMGKKGYERVKDRFL 446 (474)
Q Consensus 377 EAma~G~PvI~s~~~g~~e~v~~~------~~G~l~~~~d~~~~~la~~i~~ll~----~~~~~~~~~~~~~~~~~~~fs 446 (474)
|||+||+|||++++||+.|+|.++ .+|++++++| +++++++|.+++. +++.+++|++++++ ++||
T Consensus 384 EAma~G~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~~~~d--~~~la~~i~~~l~~~~~~~~~~~~~~~~~~~---~~fs 458 (473)
T TIGR02095 384 YAMRYGTVPIVRRTGGLADTVVDGDPEAESGTGFLFEEYD--PGALLAALSRALRLYRQDPSLWEALQKNAMS---QDFS 458 (473)
T ss_pred HHHHCCCCeEEccCCCccceEecCCCCCCCCceEEeCCCC--HHHHHHHHHHHHHHHhcCHHHHHHHHHHHhc---cCCC
Confidence 999999999999999999999987 8999999999 9999999999888 89999999988763 6799
Q ss_pred HHHHHHHHHHHHHHH
Q 011954 447 EHHMSQRIALVLREV 461 (474)
Q Consensus 447 ~~~~~~~~~~~~~~~ 461 (474)
|++++++|+++|+++
T Consensus 459 w~~~a~~~~~~Y~~l 473 (473)
T TIGR02095 459 WDKSAKQYVELYRSL 473 (473)
T ss_pred cHHHHHHHHHHHHhC
Confidence 999999999999863
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. |
| >cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-41 Score=328.13 Aligned_cols=354 Identities=20% Similarity=0.247 Sum_probs=262.7
Q ss_pred EEEEEecCCCCCChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhccc-chh-ccc-e-eeeehhcHHHHhhhcCC
Q 011954 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEH-KML-DRG-V-QVLSAKGEKAINTALNA 151 (474)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~-~~~-~~~-~-~~~~~~~~~~~~~~~~~ 151 (474)
|||++++.+..||+++.+.+++++|.+.||+|++++................ .+. ... . .+........+.+..+|
T Consensus 1 ~il~~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 80 (360)
T cd04951 1 KILYVITGLGLGGAEKQVVDLADQFVAKGHQVAIISLTGESEVKPPIDATIILNLNMSKNPLSFLLALWKLRKILRQFKP 80 (360)
T ss_pred CeEEEecCCCCCCHHHHHHHHHHhcccCCceEEEEEEeCCCCccchhhccceEEecccccchhhHHHHHHHHHHHHhcCC
Confidence 4899998888899999999999999999999999985433221111000000 000 000 0 00011123345566899
Q ss_pred CEEEEcccchhhHHhHHhhhcccccccceeeeeeccccccchhhhhhcccccccccccccccHHHHHHhHHHHhcCCCCC
Q 011954 152 DLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYFKLEYVKHLPFVAGAMIDSYTTAEYWKNRTRERLGIRMPE 231 (474)
Q Consensus 152 DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~k 231 (474)
|+||+|...+..+.. +.+.. ...++++.+.|+.........+ ..+...........+++...+.+....+++..+
T Consensus 81 div~~~~~~~~~~~~-l~~~~--~~~~~~v~~~h~~~~~~~~~~~--~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 155 (360)
T cd04951 81 DVVHAHMFHANIFAR-LLRLF--LPSPPLICTAHSKNEGGRLRML--AYRLTDFLSDLTTNVSKEALDYFIASKAFNANK 155 (360)
T ss_pred CEEEEcccchHHHHH-HHHhh--CCCCcEEEEeeccCchhHHHHH--HHHHHhhccCceEEEcHHHHHHHHhccCCCccc
Confidence 999999865543322 22222 1235788888876422111111 111111222222233444455555555567789
Q ss_pred eEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHHHHHHHHHHHHHHHHhccCCCcEEE
Q 011954 232 TYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHA 311 (474)
Q Consensus 232 i~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l 311 (474)
+.+||||+|.+.+.+.... ...+++++++++++++++++|++.+.||++.+++++.++.+ +.++++|
T Consensus 156 ~~~i~ng~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~g~~~~~kg~~~li~a~~~l~~-------~~~~~~l 222 (360)
T cd04951 156 SFVVYNGIDTDRFRKDPAR------RLKIRNALGVKNDTFVILAVGRLVEAKDYPNLLKAFAKLLS-------DYLDIKL 222 (360)
T ss_pred EEEEccccchhhcCcchHH------HHHHHHHcCcCCCCEEEEEEeeCchhcCcHHHHHHHHHHHh-------hCCCeEE
Confidence 9999999998887654322 35678888988888999999999999999999999998865 4478999
Q ss_pred EEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCCCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCC
Q 011954 312 VVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAG 391 (474)
Q Consensus 312 ~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~ 391 (474)
+|+|+|+ ..+++++.++++++.++|.|+|+++++..+|+.||++++||. .|++|++++|||++|+|||+++.|
T Consensus 223 ~i~G~g~-----~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~~v~~s~--~e~~~~~~~Ea~a~G~PvI~~~~~ 295 (360)
T cd04951 223 LIAGDGP-----LRATLERLIKALGLSNRVKLLGLRDDIAAYYNAADLFVLSSA--WEGFGLVVAEAMACELPVVATDAG 295 (360)
T ss_pred EEEcCCC-----cHHHHHHHHHhcCCCCcEEEecccccHHHHHHhhceEEeccc--ccCCChHHHHHHHcCCCEEEecCC
Confidence 9999986 678889999999998999999999999999999999999999 899999999999999999999999
Q ss_pred CcceeeeeCCceeeecCCCCChHHHHHHHHHHhh-CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 011954 392 GTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLAT-HVERRLTMGKKGYERVKDRFLEHHMSQRIALVLR 459 (474)
Q Consensus 392 g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~-~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~ 459 (474)
+..|++.+ +|++++++| +++++++|.++++ +++.++.++++ ++.+.++|||+.++++|.++|+
T Consensus 296 ~~~e~i~~--~g~~~~~~~--~~~~~~~i~~ll~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~y~ 359 (360)
T cd04951 296 GVREVVGD--SGLIVPISD--PEALANKIDEILKMSGEERDIIGAR-RERIVKKFSINSIVQQWLTLYT 359 (360)
T ss_pred ChhhEecC--CceEeCCCC--HHHHHHHHHHHHhCCHHHHHHHHHH-HHHHHHhcCHHHHHHHHHHHhh
Confidence 99999965 899999988 9999999999995 67777777766 8888899999999999999996
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have |
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-41 Score=331.03 Aligned_cols=344 Identities=20% Similarity=0.199 Sum_probs=257.8
Q ss_pred CEEEEEecCCCC---CChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhcccchhccceeeeehh-----------
Q 011954 75 KLVLLVSHELSL---SGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEHKMLDRGVQVLSAK----------- 140 (474)
Q Consensus 75 ~kIl~v~~~~~~---gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 140 (474)
|||++++..++| ||+++++.+|+++|.+. ++|.|++....... ..++.+....
T Consensus 1 mkI~~i~~~~~p~~~GG~~~~v~~l~~~l~~~-~~v~v~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~ 67 (388)
T TIGR02149 1 MKVTVLTREYPPNVYGGAGVHVEELTRELARL-MDVDVRCFGDQRFD------------SEGLTVKGYRPWSELKEANKA 67 (388)
T ss_pred CeeEEEecccCccccccHhHHHHHHHHHHHHh-cCeeEEcCCCchhc------------CCCeEEEEecChhhccchhhh
Confidence 789999998876 77789999999999887 77777775432210 1112221110
Q ss_pred ------cHHHHhhhcCCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccccc-------------hhhhhhccc
Q 011954 141 ------GEKAINTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYF-------------KLEYVKHLP 201 (474)
Q Consensus 141 ------~~~~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~-------------~~~~~~~~~ 201 (474)
.........++|+||+|+....... .... .. ...|++++.|+...... .......+.
T Consensus 68 ~~~~~~~~~~~~~~~~~divh~~~~~~~~~~-~~~~-~~--~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (388)
T TIGR02149 68 LGTFSVDLAMANDPVDADVVHSHTWYTFLAG-HLAK-KL--YDKPLVVTAHSLEPLRPWKEEQLGGGYKLSSWAEKTAIE 143 (388)
T ss_pred hhhhhHHHHHhhCCCCCCeEeecchhhhhHH-HHHH-Hh--cCCCEEEEeecccccccccccccccchhHHHHHHHHHHh
Confidence 0011112247999999986554321 2111 11 23578889998642110 001122234
Q ss_pred ccccccccccccHHHHHHhHHHHh-cCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccc
Q 011954 202 FVAGAMIDSYTTAEYWKNRTRERL-GIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVS 280 (474)
Q Consensus 202 ~~~~~~~~s~~~~~~~~~~~~~~~-~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~ 280 (474)
.++.+++.|....+. +.+.+ ++...++.+||||+|.+.+.+.. +...+++++++++.++|+++||+.
T Consensus 144 ~ad~vi~~S~~~~~~----~~~~~~~~~~~~i~vi~ng~~~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~Grl~ 211 (388)
T TIGR02149 144 AADRVIAVSGGMRED----ILKYYPDLDPEKVHVIYNGIDTKEYKPDD--------GNVVLDRYGIDRSRPYILFVGRIT 211 (388)
T ss_pred hCCEEEEccHHHHHH----HHHHcCCCCcceEEEecCCCChhhcCCCc--------hHHHHHHhCCCCCceEEEEEcccc
Confidence 556666655555444 34444 56678899999999998886542 345678888888889999999999
Q ss_pred cCcchHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCC-CCeEEEec-C--CCChHHHHhc
Q 011954 281 RGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKI-QDHVHFVN-K--TLTVSPYLAS 356 (474)
Q Consensus 281 ~~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l-~~~v~~~g-~--~~~~~~~~~~ 356 (474)
+.||++.+++|++++. ++++++++|+|+.. ++..+.+++.+.+++. .+++.+++ . .+++.++|+.
T Consensus 212 ~~Kg~~~li~a~~~l~----------~~~~l~i~g~g~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 280 (388)
T TIGR02149 212 RQKGVPHLLDAVHYIP----------KDVQVVLCAGAPDT-PEVAEEVRQAVALLDRNRTGIIWINKMLPKEELVELLSN 280 (388)
T ss_pred cccCHHHHHHHHHHHh----------hcCcEEEEeCCCCc-HHHHHHHHHHHHHhccccCceEEecCCCCHHHHHHHHHh
Confidence 9999999999998873 46889998877532 2356777877777765 34577765 3 3789999999
Q ss_pred CCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCcceeeeeCCceeeecCCCCCh------HHHHHHHHHHhhCHHHH
Q 011954 357 IDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGV------TPLANNIVKLATHVERR 430 (474)
Q Consensus 357 adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~~e~v~~~~~G~l~~~~d~~~------~~la~~i~~ll~~~~~~ 430 (474)
||++|+||. .|++|++++|||+||+|||+|+.||.+|++.++.+|++++++| + ++++++|.++++|++.+
T Consensus 281 aDv~v~ps~--~e~~g~~~lEA~a~G~PvI~s~~~~~~e~i~~~~~G~~~~~~~--~~~~~~~~~l~~~i~~l~~~~~~~ 356 (388)
T TIGR02149 281 AEVFVCPSI--YEPLGIVNLEAMACGTPVVASATGGIPEVVVDGETGFLVPPDN--SDADGFQAELAKAINILLADPELA 356 (388)
T ss_pred CCEEEeCCc--cCCCChHHHHHHHcCCCEEEeCCCCHHHHhhCCCceEEcCCCC--CcccchHHHHHHHHHHHHhCHHHH
Confidence 999999998 8999999999999999999999999999999999999999988 7 89999999999999999
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 011954 431 LTMGKKGYERVKDRFLEHHMSQRIALVLREVL 462 (474)
Q Consensus 431 ~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~ 462 (474)
++|++++++.+.++|||+.+++++.++|++++
T Consensus 357 ~~~~~~a~~~~~~~~s~~~~~~~~~~~y~~~~ 388 (388)
T TIGR02149 357 KKMGIAGRKRAEEEFSWGSIAKKTVEMYRKVL 388 (388)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999864
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor. |
| >PRK14098 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-41 Score=333.15 Aligned_cols=368 Identities=17% Similarity=0.163 Sum_probs=263.3
Q ss_pred cCEEEEEecCCCC----CChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchh---h-----hhhcccc-------------
Q 011954 74 SKLVLLVSHELSL----SGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDE---V-----IYSLEHK------------- 128 (474)
Q Consensus 74 ~~kIl~v~~~~~~----gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~---~-----~~~~~~~------------- 128 (474)
||||+|++.+..| ||..-++..|.++|++.||+|.|+.+.+..-... . ...+...
T Consensus 5 ~~~il~v~~E~~p~~k~Ggl~dv~~~Lp~al~~~g~~v~v~~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (489)
T PRK14098 5 NFKVLYVSGEVSPFVRVSALADFMASFPQALEEEGFEARIMMPKYGTINDRKFRLHDVLRLSDIEVPLKEKTDLLHVKVT 84 (489)
T ss_pred CcEEEEEeecchhhcccchHHHHHHHHHHHHHHCCCeEEEEcCCCCchhhhhhccccceEEEEEEEeecCeeEEEEEEEe
Confidence 5999999999655 8889999999999999999999999866443211 0 0000000
Q ss_pred -hhccceeeeehh-------------------------c-------HHHHhh--hcCCCEEEEcccchhhHHhHHhhhcc
Q 011954 129 -MLDRGVQVLSAK-------------------------G-------EKAINT--ALNADLVVLNTAVAGKWLDGVLKDKV 173 (474)
Q Consensus 129 -~~~~~~~~~~~~-------------------------~-------~~~~~~--~~~~DiV~~~~~~~~~~~~~~~~~~~ 173 (474)
....++.++-.. + ...+.. ..+|||||+|+..++.. ...++...
T Consensus 85 ~~~~~~v~~~~~~~~~~f~r~~~y~~~~~g~~~~d~~~rf~~f~~a~l~~~~~~~~~pDiiH~hdw~t~l~-~~~l~~~~ 163 (489)
T PRK14098 85 ALPSSKIQTYFLYNEKYFKRNGLFTDMSLGGDLKGSAEKVIFFNVGVLETLQRLGWKPDIIHCHDWYAGLV-PLLLKTVY 163 (489)
T ss_pred cccCCCceEEEEeCHHHcCCCCcCCCCccCCCCCcHHHHHHHHHHHHHHHHHhcCCCCCEEEecCcHHHHH-HHHHHHHh
Confidence 000112221100 0 001111 25899999998554433 33332211
Q ss_pred ----cccccceeeeeeccccccc-h-h--------h--------------hhhcccccccccccccccHHHHHHhHHHHh
Q 011954 174 ----SQVLPKVLWWIHEMRGHYF-K-L--------E--------------YVKHLPFVAGAMIDSYTTAEYWKNRTRERL 225 (474)
Q Consensus 174 ----~~~~~~~v~~~h~~~~~~~-~-~--------~--------------~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 225 (474)
.....|++.++|+...... . . . ....+..++.++++|....+.+...-...+
T Consensus 164 ~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~n~lk~~i~~ad~VitVS~~~a~ei~~~~~~~~ 243 (489)
T PRK14098 164 ADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLLPEEVCSGLHREGDEVNMLYTGVEHADLLTTTSPRYAEEIAGDGEEAF 243 (489)
T ss_pred hhccccCCCCEEEEcCCCcccCCCCHHHHHHhCCHHhhhhhhhcCCcccHHHHHHHhcCcceeeCHHHHHHhCcCCCCCc
Confidence 1124689999998642210 0 0 0 011224556677777766665443100012
Q ss_pred cC------CCCCeEEEeCCCCccccchhhhhH-----------HHHHhHHHHHHhcCCCC--CCEEEEEecccccCcchH
Q 011954 226 GI------RMPETYVVHLGNSKDLMDIAEDSV-----------ARRVLREHVRESLGVRD--DDLLFAIINSVSRGKGQD 286 (474)
Q Consensus 226 ~~------~~~ki~vi~ngvd~~~~~~~~~~~-----------~~~~~~~~~r~~~~~~~--~~~~i~~vgrl~~~Kg~~ 286 (474)
|+ ...++.+|+||||.+.|.|..+.. .+...+..+++++|++. +.++|+++||+.++||++
T Consensus 244 gl~~~l~~~~~kl~~I~NGID~~~~~p~~d~~~~~~~~~~~~~~k~~~k~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d 323 (489)
T PRK14098 244 GLDKVLEERKMRLHGILNGIDTRQWNPSTDKLIKKRYSIERLDGKLENKKALLEEVGLPFDEETPLVGVIINFDDFQGAE 323 (489)
T ss_pred ChHHHHHhcCCCeeEEeCCccccccCCcccccccccCCcchhhhHHHHHHHHHHHhCCCCccCCCEEEEeccccccCcHH
Confidence 33 367899999999999998754321 12234667888999874 568999999999999999
Q ss_pred HHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCC--CChHHHHhcCCEEEEcC
Q 011954 287 LFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKT--LTVSPYLASIDVLVQNS 364 (474)
Q Consensus 287 ~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~--~~~~~~~~~adv~v~ps 364 (474)
.+++|+.++.+ ++++|+|+|+|+. .+++.+++++++++ ++|.|+|.. +++..+|+.||++|+||
T Consensus 324 ~li~a~~~l~~---------~~~~lvivG~G~~---~~~~~l~~l~~~~~--~~V~~~g~~~~~~~~~~~a~aDi~l~PS 389 (489)
T PRK14098 324 LLAESLEKLVE---------LDIQLVICGSGDK---EYEKRFQDFAEEHP--EQVSVQTEFTDAFFHLAIAGLDMLLMPG 389 (489)
T ss_pred HHHHHHHHHHh---------cCcEEEEEeCCCH---HHHHHHHHHHHHCC--CCEEEEEecCHHHHHHHHHhCCEEEeCC
Confidence 99999998865 5899999999852 25678999988874 689999965 45789999999999999
Q ss_pred CCCCCCCchHHHHHHhcCCCEEEcCCCCcceeeee----CCceeeecCCCCChHHHHHHHHHHh---hCHHHHHHHHHHH
Q 011954 365 QARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVN----GTTGLLHPTGKEGVTPLANNIVKLA---THVERRLTMGKKG 437 (474)
Q Consensus 365 ~~~~E~~~~~~~EAma~G~PvI~s~~~g~~e~v~~----~~~G~l~~~~d~~~~~la~~i~~ll---~~~~~~~~~~~~~ 437 (474)
. .|+||++.+|||+||+|+|++++||+.|.+.+ +.+|++++++| +++|+++|.+++ +|++.++++++++
T Consensus 390 ~--~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~~~~~~G~l~~~~d--~~~la~ai~~~l~~~~~~~~~~~~~~~~ 465 (489)
T PRK14098 390 K--IESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSEDKGSGFIFHDYT--PEALVAKLGEALALYHDEERWEELVLEA 465 (489)
T ss_pred C--CCCchHHHHHHHhCCCCeEEecCCCCceeeecCCCCCCceeEeCCCC--HHHHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence 9 89999999999999999999999999998864 67999999999 999999999865 5888888887665
Q ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHh
Q 011954 438 YERVKDRFLEHHMSQRIALVLREVLQ 463 (474)
Q Consensus 438 ~~~~~~~fs~~~~~~~~~~~~~~~~~ 463 (474)
+.+.|||++++++|+++|+++++
T Consensus 466 ---~~~~fsw~~~a~~y~~lY~~~~~ 488 (489)
T PRK14098 466 ---MERDFSWKNSAEEYAQLYRELLG 488 (489)
T ss_pred ---hcCCCChHHHHHHHHHHHHHHhc
Confidence 34779999999999999999863
|
|
| >PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-41 Score=323.48 Aligned_cols=340 Identities=16% Similarity=0.224 Sum_probs=248.8
Q ss_pred CEEEEEecC-C--CC---CChhHHHHHHHHHHHhcCcEEEEEeCCCCC-Cchhhhhhcccchhccceeeeeh--------
Q 011954 75 KLVLLVSHE-L--SL---SGGPLLLMELAFLLRGVGAEVVWITNQKPN-EPDEVIYSLEHKMLDRGVQVLSA-------- 139 (474)
Q Consensus 75 ~kIl~v~~~-~--~~---gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-------- 139 (474)
.||++++.. + ++ ||+|+++.++++.|.. +|+++|...+. ...+... .+.++..++.
T Consensus 3 ~~~~~~~~~~~~~p~~~~g~ve~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~ 73 (380)
T PRK15484 3 DKIIFTVTPIFSIPPRGAAAVETWIYQVAKRTSI---PNRIACIKNPGYPEYTKVN------DNCDIHYIGFSRIYKRLF 73 (380)
T ss_pred ceEEEEeccCCCCCCccccHHHHHHHHhhhhccC---CeeEEEecCCCCCchhhcc------CCCceEEEEeccccchhh
Confidence 467776655 3 22 6779999999999953 99999954432 1110000 0001111111
Q ss_pred ------------hcHHHHhh---hcCCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccccchhhhhhcccccc
Q 011954 140 ------------KGEKAINT---ALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYFKLEYVKHLPFVA 204 (474)
Q Consensus 140 ------------~~~~~~~~---~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~ 204 (474)
........ ..++|+||+|+..... .. +.... ...+++.++|+... .. .+...+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~v~~~~~~~--~~-~~~~~--~~~~~v~~~h~~~~----~~---~~~~~~ 141 (380)
T PRK15484 74 QKWTRLDPLPYSQRILNIAHKFTITKDSVIVIHNSMKLY--RQ-IRERA--PQAKLVMHMHNAFE----PE---LLDKNA 141 (380)
T ss_pred hhhhccCchhHHHHHHHHHHhcCCCCCcEEEEeCcHHhH--HH-HHhhC--CCCCEEEEEecccC----hh---HhccCC
Confidence 01111121 2569999999844321 11 12222 23478888886521 11 123445
Q ss_pred cccccccccHHHHHHhHHHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcc
Q 011954 205 GAMIDSYTTAEYWKNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKG 284 (474)
Q Consensus 205 ~~~~~s~~~~~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg 284 (474)
.+++.|....+.+. +. .+..++.+||||+|.+.|.+.. ...++++++++.+..+|+++||+.+.||
T Consensus 142 ~ii~~S~~~~~~~~----~~--~~~~~i~vIpngvd~~~~~~~~--------~~~~~~~~~~~~~~~~il~~Grl~~~Kg 207 (380)
T PRK15484 142 KIIVPSQFLKKFYE----ER--LPNADISIVPNGFCLETYQSNP--------QPNLRQQLNISPDETVLLYAGRISPDKG 207 (380)
T ss_pred EEEEcCHHHHHHHH----hh--CCCCCEEEecCCCCHHHcCCcc--------hHHHHHHhCCCCCCeEEEEeccCccccC
Confidence 56666655554433 22 3567899999999998876543 2346778888878899999999999999
Q ss_pred hHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcC----chHHHHHHHHHHHcCCCCeEEEecCC--CChHHHHhcCC
Q 011954 285 QDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQ----TKFETELRNFVAEKKIQDHVHFVNKT--LTVSPYLASID 358 (474)
Q Consensus 285 ~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~----~~~~~~l~~~~~~~~l~~~v~~~g~~--~~~~~~~~~ad 358 (474)
++.+++|+.++.+ ++|+++|+|+|+|+... .++.+.+++++++++ .+++|+|+. +++.++|+.||
T Consensus 208 ~~~Li~A~~~l~~-------~~p~~~lvivG~g~~~~~~~~~~~~~~l~~~~~~l~--~~v~~~G~~~~~~l~~~~~~aD 278 (380)
T PRK15484 208 ILLLMQAFEKLAT-------AHSNLKLVVVGDPTASSKGEKAAYQKKVLEAAKRIG--DRCIMLGGQPPEKMHNYYPLAD 278 (380)
T ss_pred HHHHHHHHHHHHH-------hCCCeEEEEEeCCccccccchhHHHHHHHHHHHhcC--CcEEEeCCCCHHHHHHHHHhCC
Confidence 9999999998865 45899999999986422 235566777777766 589999985 68999999999
Q ss_pred EEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCcceeeeeCCcee-eecCCCCChHHHHHHHHHHhhCHHHHHHHHHHH
Q 011954 359 VLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGL-LHPTGKEGVTPLANNIVKLATHVERRLTMGKKG 437 (474)
Q Consensus 359 v~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~~e~v~~~~~G~-l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~ 437 (474)
++|+||.+ .|+||++++|||+||+|||+|+.||++|++.++.+|+ ++++.| +++++++|.++++|++. .+|++++
T Consensus 279 v~v~pS~~-~E~f~~~~lEAma~G~PVI~s~~gg~~Eiv~~~~~G~~l~~~~d--~~~la~~I~~ll~d~~~-~~~~~~a 354 (380)
T PRK15484 279 LVVVPSQV-EEAFCMVAVEAMAAGKPVLASTKGGITEFVLEGITGYHLAEPMT--SDSIISDINRTLADPEL-TQIAEQA 354 (380)
T ss_pred EEEeCCCC-ccccccHHHHHHHcCCCEEEeCCCCcHhhcccCCceEEEeCCCC--HHHHHHHHHHHHcCHHH-HHHHHHH
Confidence 99999984 6999999999999999999999999999999999999 567778 99999999999999985 7899999
Q ss_pred HHHHHHhcCHHHHHHHHHHHHHHHH
Q 011954 438 YERVKDRFLEHHMSQRIALVLREVL 462 (474)
Q Consensus 438 ~~~~~~~fs~~~~~~~~~~~~~~~~ 462 (474)
++.+.++|||+.++++++++|++.+
T Consensus 355 r~~~~~~fsw~~~a~~~~~~l~~~~ 379 (380)
T PRK15484 355 KDFVFSKYSWEGVTQRFEEQIHNWF 379 (380)
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHhc
Confidence 9999999999999999999998764
|
|
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-40 Score=341.12 Aligned_cols=378 Identities=15% Similarity=0.118 Sum_probs=261.5
Q ss_pred cccCEEEEEecCCC-------------CCChhHHHHHHHHHHHhcC--cEEEEEeCCCCCCchhhhhhcc----------
Q 011954 72 MKSKLVLLVSHELS-------------LSGGPLLLMELAFLLRGVG--AEVVWITNQKPNEPDEVIYSLE---------- 126 (474)
Q Consensus 72 ~~~~kIl~v~~~~~-------------~gG~~~~~~~l~~~L~~~G--~~V~v~~~~~~~~~~~~~~~~~---------- 126 (474)
.++|.|++|+.... .||...++.+|+++|+++| |+|+++|...........+..+
T Consensus 167 ~~~~~I~liS~HG~~~~~~~elg~~~DtGGq~vYV~ELAraLa~~~gv~~Vdl~TR~~~~~~~~~~y~~p~e~~~~~~~~ 246 (1050)
T TIGR02468 167 EKKLYIVLISLHGLVRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDWSYGEPTEMLTPRSSE 246 (1050)
T ss_pred cCceEEEEEccccCccccCcccCCCCCCCChHHHHHHHHHHHHhCCCCCEEEEEeCCcCccccccccCCccccccccccc
Confidence 35788999986521 1455689999999999998 8999999654321100000000
Q ss_pred ----cchhccceeeeehh-----------c-----------HHHHhh--------------hcCCCEEEEcccchhhHHh
Q 011954 127 ----HKMLDRGVQVLSAK-----------G-----------EKAINT--------------ALNADLVVLNTAVAGKWLD 166 (474)
Q Consensus 127 ----~~~~~~~~~~~~~~-----------~-----------~~~~~~--------------~~~~DiV~~~~~~~~~~~~ 166 (474)
..-...|+.+++.+ . ...... ...||+||+|...++....
T Consensus 247 ~~~~~~~~~~g~rIvRip~GP~~~~l~Ke~L~~~l~ef~d~~l~~~~~~~~~~~~~~~~~~~~~pDvIHaHyw~sG~aa~ 326 (1050)
T TIGR02468 247 NDGDEMGESSGAYIIRIPFGPRDKYIPKEELWPYIPEFVDGALSHIVNMSKVLGEQIGSGHPVWPYVIHGHYADAGDSAA 326 (1050)
T ss_pred cccccccCCCCeEEEEeccCCCCCCcCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCEEEECcchHHHHHH
Confidence 00111244443321 0 001111 0149999999765554433
Q ss_pred HHhhhcccccccceeeeeeccccccch--------------------hh---hhhcccccccccccccccHHHHHHhH--
Q 011954 167 GVLKDKVSQVLPKVLWWIHEMRGHYFK--------------------LE---YVKHLPFVAGAMIDSYTTAEYWKNRT-- 221 (474)
Q Consensus 167 ~~~~~~~~~~~~~~v~~~h~~~~~~~~--------------------~~---~~~~~~~~~~~~~~s~~~~~~~~~~~-- 221 (474)
.++.. ...|++.+.|.+...... .. ....+..++.+++.+....+.....+
T Consensus 327 -~L~~~---lgVP~V~T~HSLgr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIasT~qE~~eq~~lY~~ 402 (1050)
T TIGR02468 327 -LLSGA---LNVPMVLTGHSLGRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWGLYDG 402 (1050)
T ss_pred -HHHHh---hCCCEEEECccchhhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEEEEeCHHHHHHHHHHhcc
Confidence 33322 246899999965211100 00 01223455556665554444322111
Q ss_pred ----------------HHHhcCCCCCeEEEeCCCCccccchhhhhHHHH-------------HhHHHHHHhcCCCCCCEE
Q 011954 222 ----------------RERLGIRMPETYVVHLGNSKDLMDIAEDSVARR-------------VLREHVRESLGVRDDDLL 272 (474)
Q Consensus 222 ----------------~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~-------------~~~~~~r~~~~~~~~~~~ 272 (474)
...||...+++.|||||+|.+.|.|........ ....+++. +..++++++
T Consensus 403 ~~~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~~~~~~~~~~~~~l~r-~~~~pdkpv 481 (1050)
T TIGR02468 403 FDVILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPAKPDPPIWSEIMR-FFTNPRKPM 481 (1050)
T ss_pred CCchhhhhhhhhhcccccccccCCCCeEEeCCCCcHHHccCCCccccchhcccccccccccchhhHHHHh-hcccCCCcE
Confidence 000223345999999999999998753221100 00123333 345677789
Q ss_pred EEEecccccCcchHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcC------chHHHHHHHHHHHcCCCCeEEEecC
Q 011954 273 FAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQ------TKFETELRNFVAEKKIQDHVHFVNK 346 (474)
Q Consensus 273 i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~------~~~~~~l~~~~~~~~l~~~v~~~g~ 346 (474)
|+++||+.++||++.||+|+.++.+.. ..+++. +|+|+++... .+....++++++++++.++|.|+|+
T Consensus 482 IL~VGRL~p~KGi~~LIeAf~~L~~l~-----~~~nL~-LIiG~gdd~d~l~~~~~~~l~~L~~li~~lgL~g~V~FlG~ 555 (1050)
T TIGR02468 482 ILALARPDPKKNITTLVKAFGECRPLR-----ELANLT-LIMGNRDDIDEMSSGSSSVLTSVLKLIDKYDLYGQVAYPKH 555 (1050)
T ss_pred EEEEcCCccccCHHHHHHHHHHhHhhc-----cCCCEE-EEEecCchhhhhhccchHHHHHHHHHHHHhCCCCeEEecCC
Confidence 999999999999999999999885421 124665 4678764211 1235678899999999999999997
Q ss_pred --CCChHHHHhcC----CEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCcceeeeeCCceeeecCCCCChHHHHHHH
Q 011954 347 --TLTVSPYLASI----DVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNI 420 (474)
Q Consensus 347 --~~~~~~~~~~a----dv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i 420 (474)
.+++..+|+.| |+||+||. .|+||++++||||||+|||+|++||+.|++.++.+|++++++| +++|+++|
T Consensus 556 v~~edvp~lYr~Ad~s~DVFV~PS~--~EgFGLvlLEAMAcGlPVVASdvGG~~EII~~g~nGlLVdP~D--~eaLA~AL 631 (1050)
T TIGR02468 556 HKQSDVPDIYRLAAKTKGVFINPAF--IEPFGLTLIEAAAHGLPMVATKNGGPVDIHRVLDNGLLVDPHD--QQAIADAL 631 (1050)
T ss_pred CCHHHHHHHHHHhhhcCCeeeCCcc--cCCCCHHHHHHHHhCCCEEEeCCCCcHHHhccCCcEEEECCCC--HHHHHHHH
Confidence 48899999988 69999999 9999999999999999999999999999999999999999999 99999999
Q ss_pred HHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhh
Q 011954 421 VKLATHVERRLTMGKKGYERVKDRFLEHHMSQRIALVLREVLQYA 465 (474)
Q Consensus 421 ~~ll~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~~~ 465 (474)
.++++|++.+++|++++++.+. +|+|+.++++|++.|..+..+.
T Consensus 632 ~~LL~Dpelr~~m~~~gr~~v~-~FSWe~ia~~yl~~i~~~~~~~ 675 (1050)
T TIGR02468 632 LKLVADKQLWAECRQNGLKNIH-LFSWPEHCKTYLSRIASCRPRH 675 (1050)
T ss_pred HHHhhCHHHHHHHHHHHHHHHH-HCCHHHHHHHHHHHHHHHhccC
Confidence 9999999999999999999986 5999999999999999987544
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-41 Score=329.09 Aligned_cols=347 Identities=22% Similarity=0.268 Sum_probs=252.6
Q ss_pred CEEEEEecCCCCCChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhcccchhccce--eeee-------hhc----
Q 011954 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEHKMLDRGV--QVLS-------AKG---- 141 (474)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-------~~~---- 141 (474)
||||++++++..||+++++.+|+++|.++||+|+++|...+.... .......++ .+.. ...
T Consensus 1 mkIl~~~~~~~~gG~e~~~~~la~~L~~~G~~V~v~~~~~~~~~~------~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 74 (392)
T cd03805 1 LRVAFIHPDLGIGGAERLVVDAALALQSRGHEVTIYTSHHDPSHC------FEETKDGTLPVRVRGDWLPRSIFGRFHIL 74 (392)
T ss_pred CeEEEECCCCCCchHHHHHHHHHHHHHhCCCeEEEEcCCCCchhc------chhccCCeeEEEEEeEEEcchhhHhHHHH
Confidence 789999999989999999999999999999999999964322110 000000001 1100 000
Q ss_pred ---HH--------HHhhhcCCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccc------cchhhh--------
Q 011954 142 ---EK--------AINTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGH------YFKLEY-------- 196 (474)
Q Consensus 142 ---~~--------~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~------~~~~~~-------- 196 (474)
.+ .+....++|+||+++...+..+..... . .++++++|..... .....+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~Dvi~~~~~~~~~~~~~~~~----~--~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e 148 (392)
T cd03805 75 CAYLRMLYLALYLLLLPDEKYDVFIVDQVSACVPLLKLFS----P--SKILFYCHFPDQLLAQRGSLLKRLYRKPFDWLE 148 (392)
T ss_pred HHHHHHHHHHHHHHhcccCCCCEEEEcCcchHHHHHHHhc----C--CcEEEEEecChHHhcCCCcHHHHHHHHHHHHHH
Confidence 00 023447999999987554433222111 1 5788888843211 001011
Q ss_pred hhcccccccccccccccHHHHHHhHHHHhcCC-CCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEE
Q 011954 197 VKHLPFVAGAMIDSYTTAEYWKNRTRERLGIR-MPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAI 275 (474)
Q Consensus 197 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~-~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~ 275 (474)
...++.++.+++.|..+.+.+. +.++.. ..++.||+||+|.+.+.+.... ..++....+++.+++++
T Consensus 149 ~~~~~~ad~ii~~s~~~~~~~~----~~~~~~~~~~~~vi~n~vd~~~~~~~~~~--------~~~~~~~~~~~~~~i~~ 216 (392)
T cd03805 149 EFTTGMADKIVVNSNFTASVFK----KTFPSLAKNPREVVYPCVDTDSFESTSED--------PDPGLLIPKSGKKTFLS 216 (392)
T ss_pred HHHhhCceEEEEcChhHHHHHH----HHhcccccCCcceeCCCcCHHHcCccccc--------ccccccccCCCceEEEE
Confidence 1123455666666666655543 334333 3334699999999888654321 12223345567799999
Q ss_pred ecccccCcchHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcC---chHHHHHHHHHHH-cCCCCeEEEecCC--CC
Q 011954 276 INSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQ---TKFETELRNFVAE-KKIQDHVHFVNKT--LT 349 (474)
Q Consensus 276 vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~---~~~~~~l~~~~~~-~~l~~~v~~~g~~--~~ 349 (474)
+||+.+.||++.+++|+.++.+... +.++++|+++|+|+... .++.+++++++++ +++.++|+|+|++ ++
T Consensus 217 ~grl~~~Kg~~~ll~a~~~l~~~~~----~~~~~~l~i~G~~~~~~~~~~~~~~~l~~~~~~~~~l~~~V~f~g~~~~~~ 292 (392)
T cd03805 217 INRFERKKNIALAIEAFAILKDKLA----EFKNVRLVIAGGYDPRVAENVEYLEELQRLAEELLLLEDQVIFLPSISDSQ 292 (392)
T ss_pred EeeecccCChHHHHHHHHHHHhhcc----cccCeEEEEEcCCCCCCchhHHHHHHHHHHHHHhcCCCceEEEeCCCChHH
Confidence 9999999999999999999865210 01689999999986432 2356889999999 9999999999986 56
Q ss_pred hHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCcceeeeeCCceeeecCCCCChHHHHHHHHHHhhCHHH
Q 011954 350 VSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVER 429 (474)
Q Consensus 350 ~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~~~ 429 (474)
+..+|+.||++++||. .|+||++++|||+||+|||+|+.||..|++.++.+|+++++ | +++++++|.+++++++.
T Consensus 293 ~~~~l~~ad~~l~~s~--~E~~g~~~lEAma~G~PvI~s~~~~~~e~i~~~~~g~~~~~-~--~~~~a~~i~~l~~~~~~ 367 (392)
T cd03805 293 KELLLSSARALLYTPS--NEHFGIVPLEAMYAGKPVIACNSGGPLETVVDGETGFLCEP-T--PEEFAEAMLKLANDPDL 367 (392)
T ss_pred HHHHHhhCeEEEECCC--cCCCCchHHHHHHcCCCEEEECCCCcHHHhccCCceEEeCC-C--HHHHHHHHHHHHhChHH
Confidence 7899999999999998 89999999999999999999999999999999999999976 6 89999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHH
Q 011954 430 RLTMGKKGYERVKDRFLEHHMSQRI 454 (474)
Q Consensus 430 ~~~~~~~~~~~~~~~fs~~~~~~~~ 454 (474)
+++|++++++++.++|||+.+++++
T Consensus 368 ~~~~~~~a~~~~~~~~s~~~~~~~~ 392 (392)
T cd03805 368 ADRMGAAGRKRVKEKFSTEAFAERL 392 (392)
T ss_pred HHHHHHHHHHHHHHhcCHHHHhhhC
Confidence 9999999999999999999998764
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. |
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-40 Score=321.13 Aligned_cols=336 Identities=21% Similarity=0.248 Sum_probs=256.5
Q ss_pred cCCCCCChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhcccchhccceeee--------------ehhcHHHHhh
Q 011954 82 HELSLSGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEHKMLDRGVQVL--------------SAKGEKAINT 147 (474)
Q Consensus 82 ~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~ 147 (474)
+.+..||+++++.+++++|.++||+|.+++....... .+...++.+. .......+..
T Consensus 5 ~~~~~gG~e~~~~~l~~~L~~~g~~v~v~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 75 (355)
T cd03819 5 PALESGGVERGTLELARALVERGHRSLVASAGGRLVA---------ELEAEGSRHIKLPFISKNPLRILLNVARLRRLIR 75 (355)
T ss_pred hhhccCcHHHHHHHHHHHHHHcCCEEEEEcCCCchHH---------HHHhcCCeEEEccccccchhhhHHHHHHHHHHHH
Confidence 4566799999999999999999999999986532211 1111111111 1122334556
Q ss_pred hcCCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccccchhhhhhcccccccccccccccHHHHHHhHHHHhcC
Q 011954 148 ALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYFKLEYVKHLPFVAGAMIDSYTTAEYWKNRTRERLGI 227 (474)
Q Consensus 148 ~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 227 (474)
..+||+||+|+............ . ...|+++++|+...... .+...+...+.+++.|....+. +.+.+++
T Consensus 76 ~~~~dii~~~~~~~~~~~~~~~~-~---~~~~~i~~~h~~~~~~~--~~~~~~~~~~~vi~~s~~~~~~----~~~~~~~ 145 (355)
T cd03819 76 EEKVDIVHARSRAPAWSAYLAAR-R---TRPPFVTTVHGFYSVNF--RYNAIMARGDRVIAVSNFIADH----IRENYGV 145 (355)
T ss_pred HcCCCEEEECCCchhHHHHHHHH-h---cCCCEEEEeCCchhhHH--HHHHHHHhcCEEEEeCHHHHHH----HHHhcCC
Confidence 68999999998654332222111 1 24688999997643221 2333345566666655555444 4456788
Q ss_pred CCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHHHHHHHHHHHHHHHHhccCCC
Q 011954 228 RMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVP 307 (474)
Q Consensus 228 ~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~ 307 (474)
+..++.+||||+|.+.+.+..... .....++++++.+++.++++++||+.+.||++.+++++..+.+ +.+
T Consensus 146 ~~~k~~~i~ngi~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~-------~~~ 215 (355)
T cd03819 146 DPDRIRVIPRGVDLDRFDPGAVPP---ERILALAREWPLPKGKPVILLPGRLTRWKGQEVFIEALARLKK-------DDP 215 (355)
T ss_pred ChhhEEEecCCccccccCccccch---HHHHHHHHHcCCCCCceEEEEeeccccccCHHHHHHHHHHHHh-------cCC
Confidence 888999999999999886543221 1122367788888888999999999999999999999998865 347
Q ss_pred cEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCCCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEE
Q 011954 308 SMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLG 387 (474)
Q Consensus 308 ~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~ 387 (474)
+++|+|+|+++... .+.+.+.+.+.++++.++|.|+|+.+++.++|+.||++++||.. .|++|++++|||+||+|||+
T Consensus 216 ~~~l~ivG~~~~~~-~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~l~~ad~~i~ps~~-~e~~~~~l~EA~a~G~PvI~ 293 (355)
T cd03819 216 DVHLLIVGDAQGRR-FYYAELLELIKRLGLQDRVTFVGHCSDMPAAYALADIVVSASTE-PEAFGRTAVEAQAMGRPVIA 293 (355)
T ss_pred CeEEEEEECCcccc-hHHHHHHHHHHHcCCcceEEEcCCcccHHHHHHhCCEEEecCCC-CCCCchHHHHHHhcCCCEEE
Confidence 89999999986432 35566777888999989999999999999999999999999942 89999999999999999999
Q ss_pred cCCCCcceeeeeCCceeeecCCCCChHHHHHHHHHHhh-CHHHHHHHHHHHHHHHHHhcCHHHH
Q 011954 388 TAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLAT-HVERRLTMGKKGYERVKDRFLEHHM 450 (474)
Q Consensus 388 s~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~-~~~~~~~~~~~~~~~~~~~fs~~~~ 450 (474)
++.||..|++.++.+|++++++| +++++++|..++. +++.++++++++++.+.++|+|+.+
T Consensus 294 ~~~~~~~e~i~~~~~g~~~~~~~--~~~l~~~i~~~~~~~~~~~~~~~~~a~~~~~~~f~~~~~ 355 (355)
T cd03819 294 SDHGGARETVRPGETGLLVPPGD--AEALAQALDQILSLLPEGRAKMFAKARMCVETLFSYDRM 355 (355)
T ss_pred cCCCCcHHHHhCCCceEEeCCCC--HHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhhhhccC
Confidence 99999999999988999999988 9999999975555 8999999999999999999999864
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. |
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-40 Score=319.34 Aligned_cols=345 Identities=25% Similarity=0.307 Sum_probs=264.5
Q ss_pred EEEEEecCCCCCChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhcccchhccceeeee------------hhcHH
Q 011954 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEHKMLDRGVQVLS------------AKGEK 143 (474)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~ 143 (474)
||+++.+.+.+||+++++..|+++|.+.|++|.+++........ ..+...++.+.. .....
T Consensus 1 ~i~~i~~~~~~gG~~~~~~~l~~~l~~~~~~v~~~~~~~~~~~~-------~~~~~~~i~v~~~~~~~~~~~~~~~~~~~ 73 (365)
T cd03807 1 KVLHVITGLDVGGAERMLVRLLKGLDRDRFEHVVISLTDRGELG-------EELEEAGVPVYCLGKRPGRPDPGALLRLY 73 (365)
T ss_pred CeEEEEeeccCccHHHHHHHHHHHhhhccceEEEEecCcchhhh-------HHHHhcCCeEEEEecccccccHHHHHHHH
Confidence 69999999999999999999999999999999999865332211 111112222211 12234
Q ss_pred HHhhhcCCCEEEEcccchhhHHhHHhhhcccccccceeeeeecccccc---chhhhh----hcccccccccccccccHHH
Q 011954 144 AINTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHY---FKLEYV----KHLPFVAGAMIDSYTTAEY 216 (474)
Q Consensus 144 ~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~---~~~~~~----~~~~~~~~~~~~s~~~~~~ 216 (474)
.+.+..+||+||++......+...... .. ..++++++.|+..... ...... ......+..++.+....+.
T Consensus 74 ~~~~~~~~div~~~~~~~~~~~~~~~~-~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~ 150 (365)
T cd03807 74 KLIRRLRPDVVHTWMYHADLYGGLAAR-LA--GVPPVIWGIRHSDLDLGKKSTRLVARLRRLLSSFIPLIVANSAAAAEY 150 (365)
T ss_pred HHHHhhCCCEEEeccccccHHHHHHHH-hc--CCCcEEEEecCCcccccchhHhHHHHHHHHhccccCeEEeccHHHHHH
Confidence 455568999999986544332222111 11 2367888899865442 111111 1122333334444433333
Q ss_pred HHHhHHHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHHHHHHHHHHH
Q 011954 217 WKNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESL 296 (474)
Q Consensus 217 ~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~ 296 (474)
+. .++++..++.+++||+|...+.+.... ....+++++++++.++++++|++.+.||++.+++++.++.
T Consensus 151 ----~~-~~~~~~~~~~vi~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~ 219 (365)
T cd03807 151 ----HQ-AIGYPPKKIVVIPNGVDTERFSPDLDA------RARLREELGLPEDTFLIGIVARLHPQKDHATLLRAAALLL 219 (365)
T ss_pred ----HH-HcCCChhheeEeCCCcCHHhcCCcccc------hHHHHHhcCCCCCCeEEEEecccchhcCHHHHHHHHHHHH
Confidence 32 337777899999999999877654332 3456778899888999999999999999999999999886
Q ss_pred HHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHH-HcCCCCeEEEecCCCChHHHHhcCCEEEEcCCCCCCCCchHH
Q 011954 297 QLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVA-EKKIQDHVHFVNKTLTVSPYLASIDVLVQNSQARGECFGRIT 375 (474)
Q Consensus 297 ~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~-~~~l~~~v~~~g~~~~~~~~~~~adv~v~ps~~~~E~~~~~~ 375 (474)
+ +.++++|+++|.++ ....++.... ++++.+++.++|..+++..+|+.||++++||. .|++|+++
T Consensus 220 ~-------~~~~~~l~i~G~~~-----~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~adi~v~ps~--~e~~~~~~ 285 (365)
T cd03807 220 K-------KFPNARLLLVGDGP-----DRANLELLALKELGLEDKVILLGERSDVPALLNALDVFVLSSL--SEGFPNVL 285 (365)
T ss_pred H-------hCCCeEEEEecCCc-----chhHHHHHHHHhcCCCceEEEccccccHHHHHHhCCEEEeCCc--cccCCcHH
Confidence 6 34889999999986 4455566665 88888999999999999999999999999999 79999999
Q ss_pred HHHHhcCCCEEEcCCCCcceeeeeCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 011954 376 IEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRFLEHHMSQRIA 455 (474)
Q Consensus 376 ~EAma~G~PvI~s~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~ 455 (474)
+|||+||+|||+++.|+..|++.+ +|++++++| +++++++|..++++++.+.++++++++++.++|||+.+++++.
T Consensus 286 ~Ea~a~g~PvI~~~~~~~~e~~~~--~g~~~~~~~--~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 361 (365)
T cd03807 286 LEAMACGLPVVATDVGDNAELVGD--TGFLVPPGD--PEALAEAIEALLADPALRQALGEAARERIEENFSIEAMVEAYE 361 (365)
T ss_pred HHHHhcCCCEEEcCCCChHHHhhc--CCEEeCCCC--HHHHHHHHHHHHhChHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 999999999999999999999966 899999988 9999999999999999999999999999999999999999999
Q ss_pred HHHH
Q 011954 456 LVLR 459 (474)
Q Consensus 456 ~~~~ 459 (474)
++|+
T Consensus 362 ~~y~ 365 (365)
T cd03807 362 ELYR 365 (365)
T ss_pred HHhC
Confidence 9984
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. |
| >TIGR02470 sucr_synth sucrose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-40 Score=329.83 Aligned_cols=371 Identities=17% Similarity=0.208 Sum_probs=251.4
Q ss_pred ccCEEEEEecCCC-----------CCChhHHHHHHHHHH--------HhcCc----EEEEEeCCCCCCchh-hhhhcccc
Q 011954 73 KSKLVLLVSHELS-----------LSGGPLLLMELAFLL--------RGVGA----EVVWITNQKPNEPDE-VIYSLEHK 128 (474)
Q Consensus 73 ~~~kIl~v~~~~~-----------~gG~~~~~~~l~~~L--------~~~G~----~V~v~~~~~~~~~~~-~~~~~~~~ 128 (474)
|.|||++++.... .||...++.+++++| +++|| +|+|+|...++.... ....+...
T Consensus 254 ~~~rIa~lS~Hg~~~~~~~lG~~DtGGq~vYV~elaraL~~~~~~~La~~G~~v~~~V~I~TR~~~~~~~~~~~~~~e~~ 333 (784)
T TIGR02470 254 MVFNVVILSPHGYFGQENVLGLPDTGGQVVYILDQVRALENEMLQRIKLQGLEITPKILIVTRLIPDAEGTTCNQRLEKV 333 (784)
T ss_pred ccceEEEEecccccCCccccCCCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCCccccccccccccc
Confidence 5689999997752 155568999999975 68999 778999654322110 00000111
Q ss_pred hhccceeeeehh---------------------------c-HHHHhh--hcCCCEEEEcccchhhHHhHHhhhccccccc
Q 011954 129 MLDRGVQVLSAK---------------------------G-EKAINT--ALNADLVVLNTAVAGKWLDGVLKDKVSQVLP 178 (474)
Q Consensus 129 ~~~~~~~~~~~~---------------------------~-~~~~~~--~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~ 178 (474)
-...++.+.+.+ . ...+.. ..+||+||+|.+..+... ..++.. ...
T Consensus 334 ~~~~~~~I~rvp~g~~~~~~~~~~i~k~~l~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d~glva-~lla~~---lgV 409 (784)
T TIGR02470 334 YGTEHAWILRVPFRTENGIILRNWISRFEIWPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVA-SLLARK---LGV 409 (784)
T ss_pred cCCCceEEEEecCCCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCCchHHHH-HHHHHh---cCC
Confidence 111222221110 0 011111 247999999986665544 333332 245
Q ss_pred ceeeeeecccccc-------ch---hhh---------hhcccccccccccccccHHHHHHhHH-----------HHh---
Q 011954 179 KVLWWIHEMRGHY-------FK---LEY---------VKHLPFVAGAMIDSYTTAEYWKNRTR-----------ERL--- 225 (474)
Q Consensus 179 ~~v~~~h~~~~~~-------~~---~~~---------~~~~~~~~~~~~~s~~~~~~~~~~~~-----------~~~--- 225 (474)
|.+.+.|...... +. ..+ ...+..++.+++.+..-.....+.+. ..+
T Consensus 410 P~v~t~HsL~~~K~~~~g~~~~~~e~~~~~~~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v~qY~s~~~ft~p~Ly~vv 489 (784)
T TIGR02470 410 TQCTIAHALEKTKYPDSDIYWQEFEDKYHFSCQFTADLIAMNAADFIITSTYQEIAGTKDSVGQYESHQAFTMPGLYRVV 489 (784)
T ss_pred CEEEECCcchhhcccccccccccchhHHHhhhhhhHHHHHHhcCCEEEECcHHHhhhhhhhhhhhhhcccccccceeeee
Confidence 7788888642110 00 000 12223445555555311010001100 011
Q ss_pred -cC--CCCCeEEEeCCCCccccchhhhhHHHH-----------HhHHHHHHhcCC--CCCCEEEEEecccccCcchHHHH
Q 011954 226 -GI--RMPETYVVHLGNSKDLMDIAEDSVARR-----------VLREHVRESLGV--RDDDLLFAIINSVSRGKGQDLFL 289 (474)
Q Consensus 226 -~~--~~~ki~vi~ngvd~~~~~~~~~~~~~~-----------~~~~~~r~~~~~--~~~~~~i~~vgrl~~~Kg~~~ll 289 (474)
|+ ..+|+.|||+|+|.+.|.|......+. ..+.+.++.+|+ +.++++|+++||+.+.||++.++
T Consensus 490 nGid~~~~Ki~VVpPGVD~~iF~P~~~~~~r~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LI 569 (784)
T TIGR02470 490 HGIDVFDPKFNIVSPGADESIYFPYSDKEKRLTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLV 569 (784)
T ss_pred cCccCCcCCeEEECCCcChhhcCCCCchhhhhhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHH
Confidence 22 457999999999999887654321110 011234566775 56778999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCCcEEEEEEcCCCCc----Cc---hHHHHHHHHHHHcCCCCeEEEecCC---CChHHHHh----
Q 011954 290 HSFYESLQLIREKKLQVPSMHAVVVGSDMNA----QT---KFETELRNFVAEKKIQDHVHFVNKT---LTVSPYLA---- 355 (474)
Q Consensus 290 ~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~----~~---~~~~~l~~~~~~~~l~~~v~~~g~~---~~~~~~~~---- 355 (474)
+|+.++.+ ..++++|+|+|++... +. +..+++.++++++++.++|.|+|++ .++.++|.
T Consensus 570 eA~~~l~~-------l~~~~~LVIVGGg~~~~~s~d~ee~~~i~~L~~la~~~gL~g~V~flG~~~~~~~~~elyr~iAd 642 (784)
T TIGR02470 570 ECYGRSPK-------LRELVNLVVVAGKLDAKESKDREEQAEIEKMHNLIDQYQLHGQIRWIGAQLNRVRNGELYRYIAD 642 (784)
T ss_pred HHHHHhHh-------hCCCeEEEEEeCCcccccccchhHHHHHHHHHHHHHHhCCCCeEEEccCcCCcccHHHHHHHhhc
Confidence 99987643 1257899999987531 11 1346788899999999999999964 45566664
Q ss_pred cCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCcceeeeeCCceeeecCCCCChHHHHHHHHHHh----hCHHHHH
Q 011954 356 SIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLA----THVERRL 431 (474)
Q Consensus 356 ~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll----~~~~~~~ 431 (474)
.+|+||+||. +|+||++++|||+||+|||+|++||+.|+|.++.+|+++++.| +++++++|.+++ +|++.++
T Consensus 643 ~adVfV~PS~--~EpFGLvvLEAMAcGlPVVAT~~GG~~EiV~dg~tGfLVdp~D--~eaLA~aL~~ll~kll~dp~~~~ 718 (784)
T TIGR02470 643 TKGIFVQPAL--YEAFGLTVLEAMTCGLPTFATRFGGPLEIIQDGVSGFHIDPYH--GEEAAEKIVDFFEKCDEDPSYWQ 718 (784)
T ss_pred cCcEEEECCc--ccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEeCCCC--HHHHHHHHHHHHHHhcCCHHHHH
Confidence 3579999998 9999999999999999999999999999999999999999999 999999999876 5999999
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 011954 432 TMGKKGYERVKDRFLEHHMSQRIALVL 458 (474)
Q Consensus 432 ~~~~~~~~~~~~~fs~~~~~~~~~~~~ 458 (474)
+|+++|++++.++|||+.++++++++.
T Consensus 719 ~ms~~a~~rV~~~FSW~~~A~~ll~l~ 745 (784)
T TIGR02470 719 KISQGGLQRIYEKYTWKIYSERLLTLA 745 (784)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 999999999999999999999998875
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria. |
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-40 Score=330.00 Aligned_cols=364 Identities=19% Similarity=0.170 Sum_probs=259.7
Q ss_pred EEEEEecCCCC----CChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhccc------------------chhccc
Q 011954 76 LVLLVSHELSL----SGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEH------------------KMLDRG 133 (474)
Q Consensus 76 kIl~v~~~~~~----gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~------------------~~~~~~ 133 (474)
|||+++++..| ||.+.++..|+++|+++||+|.|+++.++............ .....+
T Consensus 1 ~Il~v~~E~~p~~k~GGl~~~~~~L~~aL~~~G~~V~Vi~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 80 (476)
T cd03791 1 KVLFVASEVAPFAKTGGLGDVVGALPKALAKLGHDVRVIMPKYGRILDELRGQLLVLRLFGVPVGGRPEYVGVFELPVDG 80 (476)
T ss_pred CEEEEEccccccccCCcHHHHHHHHHHHHHHCCCeEEEEecCCcchhhHhccCeEEEEEEeeccCCceeEEEEEEEEeCC
Confidence 59999998544 88899999999999999999999997665432211000000 001112
Q ss_pred eeeeehh------------------------------cHHHHhh--hcCCCEEEEcccchhhHHhHHhhhcc--cccccc
Q 011954 134 VQVLSAK------------------------------GEKAINT--ALNADLVVLNTAVAGKWLDGVLKDKV--SQVLPK 179 (474)
Q Consensus 134 ~~~~~~~------------------------------~~~~~~~--~~~~DiV~~~~~~~~~~~~~~~~~~~--~~~~~~ 179 (474)
+.++... ....+.. ..+||+||+|+..++.....+..... .....|
T Consensus 81 v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~l~~~~~~pDviH~hd~~t~~~~~~l~~~~~~~~~~~~~ 160 (476)
T cd03791 81 VPVYFLDNPDYFDRPGLYDDSGYDYEDNAERFALFSRAALELLRRLGWKPDIIHCHDWHTGLVPALLKEKYADPFFKNIK 160 (476)
T ss_pred ceEEEEcChHHcCCCCCCCccCCCCccHHHHHHHHHHHHHHHHHhcCCCCcEEEECchHHHHHHHHHHHhhccccCCCCC
Confidence 2222110 0111222 27999999998665544333322210 112468
Q ss_pred eeeeeecccccc-chh--------------------------hhhhcccccccccccccccHHHHHHh-----HHHHhcC
Q 011954 180 VLWWIHEMRGHY-FKL--------------------------EYVKHLPFVAGAMIDSYTTAEYWKNR-----TRERLGI 227 (474)
Q Consensus 180 ~v~~~h~~~~~~-~~~--------------------------~~~~~~~~~~~~~~~s~~~~~~~~~~-----~~~~~~~ 227 (474)
+++++|+..... +.. .....+..++.++++|....+.+... +...+..
T Consensus 161 ~v~tiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~~~~~~i~~~~~~~gl~~~~~~ 240 (476)
T cd03791 161 TVFTIHNLAYQGVFPLEALEDLGLPWEELFHIDGLEFYGQVNFLKAGIVYADAVTTVSPTYAREILTPEFGEGLDGLLRA 240 (476)
T ss_pred EEEEeCCCCCCCCCCHHHHHHcCCCccchhhhcccccCCcccHHHHHHHhcCcCeecCHhHHHHhCCCCCCcchHHHHHh
Confidence 999999863211 000 01112345566667776665554421 1112333
Q ss_pred CCCCeEEEeCCCCccccchhhhhH-----------HHHHhHHHHHHhcCCC--CCCEEEEEecccccCcchHHHHHHHHH
Q 011954 228 RMPETYVVHLGNSKDLMDIAEDSV-----------ARRVLREHVRESLGVR--DDDLLFAIINSVSRGKGQDLFLHSFYE 294 (474)
Q Consensus 228 ~~~ki~vi~ngvd~~~~~~~~~~~-----------~~~~~~~~~r~~~~~~--~~~~~i~~vgrl~~~Kg~~~ll~a~~~ 294 (474)
...++.+|+||+|.+.|.+..+.. .+...+..+++++|++ ++.++|+++||+.++||++.+++++.+
T Consensus 241 ~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~~~~~k~~l~~~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~ 320 (476)
T cd03791 241 RAGKLSGILNGIDYDVWNPATDPHLPANYSADDLEGKAENKAALQEELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPE 320 (476)
T ss_pred ccCCeEEEeCCCcCcccCccccchhhhcCCccccccHHHHHHHHHHHcCCCcCCCCCEEEEEeeccccccHHHHHHHHHH
Confidence 568999999999999988754332 1234467789999985 677999999999999999999999998
Q ss_pred HHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEec-CC-CChHHHHhcCCEEEEcCCCCCCCCc
Q 011954 295 SLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVN-KT-LTVSPYLASIDVLVQNSQARGECFG 372 (474)
Q Consensus 295 l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g-~~-~~~~~~~~~adv~v~ps~~~~E~~~ 372 (474)
+.+ .+++|+|+|+|+. ++.+.++++++++ .+++.+.+ +. +.+..+|+.||++|+||. .|+||
T Consensus 321 l~~---------~~~~lvi~G~g~~---~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~aDv~l~pS~--~E~~g 384 (476)
T cd03791 321 LLE---------LGGQLVILGSGDP---EYEEALRELAARY--PGRVAVLIGYDEALAHLIYAGADFFLMPSR--FEPCG 384 (476)
T ss_pred HHH---------cCcEEEEEecCCH---HHHHHHHHHHHhC--CCcEEEEEeCCHHHHHHHHHhCCEEECCCC--CCCCc
Confidence 865 4599999999842 2567777777776 35777654 44 445789999999999999 89999
Q ss_pred hHHHHHHhcCCCEEEcCCCCcceeeeeCC------ceeeecCCCCChHHHHHHHHHHhh---CHHHHHHHHHHHHHHHHH
Q 011954 373 RITIEAMAFQLPVLGTAAGGTMEIVVNGT------TGLLHPTGKEGVTPLANNIVKLAT---HVERRLTMGKKGYERVKD 443 (474)
Q Consensus 373 ~~~~EAma~G~PvI~s~~~g~~e~v~~~~------~G~l~~~~d~~~~~la~~i~~ll~---~~~~~~~~~~~~~~~~~~ 443 (474)
++++|||+||+|||++++||+.|++.++. +|+++++.| +++++++|.++++ +++.+.+|++++++ +
T Consensus 385 l~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~~--~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~---~ 459 (476)
T cd03791 385 LTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGEGTGFVFEGYN--ADALLAALRRALALYRDPEAWRKLQRNAMA---Q 459 (476)
T ss_pred HHHHHHhhCCCCCEECcCCCccceEeCCcCCCCCCCeEEeCCCC--HHHHHHHHHHHHHHHcCHHHHHHHHHHHhc---c
Confidence 99999999999999999999999999987 999999998 9999999999875 67777887777654 5
Q ss_pred hcCHHHHHHHHHHHHHH
Q 011954 444 RFLEHHMSQRIALVLRE 460 (474)
Q Consensus 444 ~fs~~~~~~~~~~~~~~ 460 (474)
.|||+.++++|+++|++
T Consensus 460 ~fsw~~~a~~~~~~y~~ 476 (476)
T cd03791 460 DFSWDRSAKEYLELYRS 476 (476)
T ss_pred CCChHHHHHHHHHHHhC
Confidence 69999999999999963
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| >PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-40 Score=317.89 Aligned_cols=342 Identities=13% Similarity=0.164 Sum_probs=244.9
Q ss_pred CEEEEEecCCC-CCChhHHHHHHHHHHHhc--CcEEEEEeCCCCCCchhhhhhcc--cchhccceee----eehhcHHHH
Q 011954 75 KLVLLVSHELS-LSGGPLLLMELAFLLRGV--GAEVVWITNQKPNEPDEVIYSLE--HKMLDRGVQV----LSAKGEKAI 145 (474)
Q Consensus 75 ~kIl~v~~~~~-~gG~~~~~~~l~~~L~~~--G~~V~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~----~~~~~~~~~ 145 (474)
|||+++++.++ .||+|+++.+++++|.+. ||+|.+++.......... ..+. .......+.. .....+.++
T Consensus 1 mkI~~~~~~~~~~GG~e~~~~~l~~~L~~~~~g~~v~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 79 (359)
T PRK09922 1 MKIAFIGEAVSGFGGMETVISNVINTFEESKINCEMFFFCRNDKMDKAWL-KEIKYAQSFSNIKLSFLRRAKHVYNFSKW 79 (359)
T ss_pred CeeEEecccccCCCchhHHHHHHHHHhhhcCcceeEEEEecCCCCChHHH-HhcchhcccccchhhhhcccHHHHHHHHH
Confidence 79999998754 499999999999999999 899999986544221110 0011 0000011110 112344566
Q ss_pred hhhcCCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccccchhhhhhcccccccccccccccHHHHHHhHHHHh
Q 011954 146 NTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYFKLEYVKHLPFVAGAMIDSYTTAEYWKNRTRERL 225 (474)
Q Consensus 146 ~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 225 (474)
.+..+||+||+|++.+..+... ..... ....+++.+.|......... ....+...+.+++.|..+.+.+. .+
T Consensus 80 l~~~~~Dii~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~h~~~~~~~~~-~~~~~~~~d~~i~~S~~~~~~~~-----~~ 151 (359)
T PRK09922 80 LKETQPDIVICIDVISCLYANK-ARKKS-GKQFKIFSWPHFSLDHKKHA-ECKKITCADYHLAISSGIKEQMM-----AR 151 (359)
T ss_pred HHhcCCCEEEEcCHHHHHHHHH-HHHHh-CCCCeEEEEecCcccccchh-hhhhhhcCCEEEEcCHHHHHHHH-----Hc
Confidence 7779999999998655433222 22211 11124555666432111111 11223556666666666555443 35
Q ss_pred cCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccc--cCcchHHHHHHHHHHHHHHHHhc
Q 011954 226 GIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVS--RGKGQDLFLHSFYESLQLIREKK 303 (474)
Q Consensus 226 ~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~--~~Kg~~~ll~a~~~l~~~~~~~~ 303 (474)
+++.+++.+||||+|.+.+..... ...++++++++||+. +.||++.+++++.++.
T Consensus 152 ~~~~~ki~vi~N~id~~~~~~~~~----------------~~~~~~~i~~~Grl~~~~~k~~~~l~~a~~~~~------- 208 (359)
T PRK09922 152 GISAQRISVIYNPVEIKTIIIPPP----------------ERDKPAVFLYVGRLKFEGQKNVKELFDGLSQTT------- 208 (359)
T ss_pred CCCHHHEEEEcCCCCHHHccCCCc----------------ccCCCcEEEEEEEEecccCcCHHHHHHHHHhhC-------
Confidence 777789999999999664432110 013467899999996 4699999999998762
Q ss_pred cCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCCC----ChHHHHhcCCEEEEcCCCCCCCCchHHHHHH
Q 011954 304 LQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTL----TVSPYLASIDVLVQNSQARGECFGRITIEAM 379 (474)
Q Consensus 304 ~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~----~~~~~~~~adv~v~ps~~~~E~~~~~~~EAm 379 (474)
++++|+|+|+|+ ..++++++++++++.++|+|+|+++ ++.++|+.+|++|+||. .||||++++|||
T Consensus 209 ---~~~~l~ivG~g~-----~~~~l~~~~~~~~l~~~v~f~G~~~~~~~~~~~~~~~~d~~v~~s~--~Egf~~~~lEAm 278 (359)
T PRK09922 209 ---GEWQLHIIGDGS-----DFEKCKAYSRELGIEQRIIWHGWQSQPWEVVQQKIKNVSALLLTSK--FEGFPMTLLEAM 278 (359)
T ss_pred ---CCeEEEEEeCCc-----cHHHHHHHHHHcCCCCeEEEecccCCcHHHHHHHHhcCcEEEECCc--ccCcChHHHHHH
Confidence 479999999996 6788999999999999999999864 46777889999999999 899999999999
Q ss_pred hcCCCEEEcC-CCCcceeeeeCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 011954 380 AFQLPVLGTA-AGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRFLEHHMSQRIALVL 458 (474)
Q Consensus 380 a~G~PvI~s~-~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~ 458 (474)
|||+|||+|+ .||..|++.++.+|++++++| +++++++|.++++|++.+. .++......+|+.+.+.+++.++|
T Consensus 279 a~G~Pvv~s~~~~g~~eiv~~~~~G~lv~~~d--~~~la~~i~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 353 (359)
T PRK09922 279 SYGIPCISSDCMSGPRDIIKPGLNGELYTPGN--IDEFVGKLNKVISGEVKYQ---HDAIPNSIERFYEVLYFKNLNNAL 353 (359)
T ss_pred HcCCCEEEeCCCCChHHHccCCCceEEECCCC--HHHHHHHHHHHHhCcccCC---HHHHHHHHHHhhHHHHHHHHHHHH
Confidence 9999999999 899999999999999999998 9999999999999987541 223333445588889999999999
Q ss_pred HHHHh
Q 011954 459 REVLQ 463 (474)
Q Consensus 459 ~~~~~ 463 (474)
..+++
T Consensus 354 ~~~~~ 358 (359)
T PRK09922 354 FSKLQ 358 (359)
T ss_pred HHHhc
Confidence 88764
|
|
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-40 Score=321.02 Aligned_cols=347 Identities=18% Similarity=0.188 Sum_probs=236.6
Q ss_pred EEEEEecCCCCCChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchh-hh-hhcccch--hccceeeeehh-----------
Q 011954 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDE-VI-YSLEHKM--LDRGVQVLSAK----------- 140 (474)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~-~~-~~~~~~~--~~~~~~~~~~~----------- 140 (474)
||||++..++. ....|+++|.++||+|+++|......... +. ..+...- ...........
T Consensus 1 ~il~~~~~~p~-----~~~~la~~L~~~G~~v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (396)
T cd03818 1 RILFVHQNFPG-----QFRHLAPALAAQGHEVVFLTEPNAAPPPGGVRVVRYRPPRGPTSGTHPYLREFEEAVLRGQAVA 75 (396)
T ss_pred CEEEECCCCch-----hHHHHHHHHHHCCCEEEEEecCCCCCCCCCeeEEEecCCCCCCCCCCccchhHHHHHHHHHHHH
Confidence 59999987762 46789999999999999999765543221 00 0000000 00000000000
Q ss_pred -cHHHH-hhhcCCCEEEEcccchhhHHhHHhhhcccccccceeeee------eccccccc-----h----hhh-------
Q 011954 141 -GEKAI-NTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWI------HEMRGHYF-----K----LEY------- 196 (474)
Q Consensus 141 -~~~~~-~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~------h~~~~~~~-----~----~~~------- 196 (474)
....+ .+..+||+||+|..+..... ++...+. .+++.++ |+....+. . ...
T Consensus 76 ~~~~~~~~~~~~pdvi~~h~~~~~~~~---l~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (396)
T cd03818 76 RALLALRAKGFRPDVIVAHPGWGETLF---LKDVWPD--APLIGYFEFYYRAEGADVGFDPEFPPSLDDALRLRNRNALI 150 (396)
T ss_pred HHHHHHHhcCCCCCEEEECCccchhhh---HHHhCCC--CCEEEEEeeeecCCCCCCCCCCCCCCchhHHHHHHHhhhHh
Confidence 00111 23368999999986543321 1212211 2444333 22111010 0 111
Q ss_pred hhcccccccccccccccHHHHHHhHHHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEe
Q 011954 197 VKHLPFVAGAMIDSYTTAEYWKNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAII 276 (474)
Q Consensus 197 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~v 276 (474)
...+..++.+++.|....+.+.. .+ ..++.|||||+|.+.|.+.... ....+....++.+.++++|+
T Consensus 151 ~~~~~~ad~vi~~s~~~~~~~~~----~~---~~ki~vI~ngvd~~~f~~~~~~------~~~~~~~~~~~~~~~~i~~v 217 (396)
T cd03818 151 LLALAQADAGVSPTRWQRSTFPA----EL---RSRISVIHDGIDTDRLRPDPQA------RLRLPNGRVLTPGDEVITFV 217 (396)
T ss_pred HHHHHhCCEEECCCHHHHhhCcH----hh---ccceEEeCCCccccccCCCchh------hhcccccccCCCCCeEEEEE
Confidence 12345666667666665554432 22 3689999999999998765422 11223333455677889999
Q ss_pred cc-cccCcchHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCc----hHHHHHHHHHHHcCC---CCeEEEecCC-
Q 011954 277 NS-VSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQT----KFETELRNFVAEKKI---QDHVHFVNKT- 347 (474)
Q Consensus 277 gr-l~~~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~----~~~~~l~~~~~~~~l---~~~v~~~g~~- 347 (474)
|| +.+.||++.+++|+.++.+ +.++++|+|+|++..... ......+++.++++. .++|+|+|++
T Consensus 218 gR~l~~~Kg~~~ll~a~~~l~~-------~~~~~~lvivG~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~V~f~G~v~ 290 (396)
T cd03818 218 ARNLEPYRGFHVFMRALPRLLR-------ARPDARVVIVGGDGVSYGAPPPDGESWKQHMLDELGGRLDLSRVHFLGRVP 290 (396)
T ss_pred CCCcccccCHHHHHHHHHHHHH-------HCCCcEEEEEcCCCcccCCCCCCcccHHHHHHHHhhcccCcceEEEeCCCC
Confidence 98 9999999999999998865 458999999997431100 001112222333331 4789999986
Q ss_pred -CChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCcceeeeeCCceeeecCCCCChHHHHHHHHHHhhC
Q 011954 348 -LTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATH 426 (474)
Q Consensus 348 -~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~ 426 (474)
+++..+|+.||++|+||. .|++|++++||||||+|||+|+.||+.|++.++.+|++++++| +++++++|.++++|
T Consensus 291 ~~~~~~~l~~adv~v~~s~--~e~~~~~llEAmA~G~PVIas~~~g~~e~i~~~~~G~lv~~~d--~~~la~~i~~ll~~ 366 (396)
T cd03818 291 YDQYLALLQVSDVHVYLTY--PFVLSWSLLEAMACGCLVVGSDTAPVREVITDGENGLLVDFFD--PDALAAAVIELLDD 366 (396)
T ss_pred HHHHHHHHHhCcEEEEcCc--ccccchHHHHHHHCCCCEEEcCCCCchhhcccCCceEEcCCCC--HHHHHHHHHHHHhC
Confidence 689999999999999998 8999999999999999999999999999999999999999999 99999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Q 011954 427 VERRLTMGKKGYERVKDRFLEHHMSQRIAL 456 (474)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~ 456 (474)
++.+.+|++++++++.++|||+.++++|++
T Consensus 367 ~~~~~~l~~~ar~~~~~~fs~~~~~~~~~~ 396 (396)
T cd03818 367 PARRARLRRAARRTALRYDLLSVCLPRQLA 396 (396)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHhC
Confidence 999999999999999999999999998863
|
ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). |
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-39 Score=312.43 Aligned_cols=330 Identities=20% Similarity=0.219 Sum_probs=249.8
Q ss_pred CEEEEEecCCCCCChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhcccchhccceeeeehhcHHHHhhhcCCCEE
Q 011954 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEHKMLDRGVQVLSAKGEKAINTALNADLV 154 (474)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DiV 154 (474)
|||++++.....||+++++..++++|.++||+|++++.... .+.......++|+|
T Consensus 1 MkIl~~~~~~~~gG~~~~~~~l~~~l~~~G~~v~v~~~~~~-------------------------~~~~~~~~~~~dii 55 (365)
T cd03825 1 MKVLHLNTSDISGGAARAAYRLHRALQAAGVDSTMLVQEKK-------------------------ALISKIEIINADIV 55 (365)
T ss_pred CeEEEEecCCCCCcHHHHHHHHHHHHHhcCCceeEEEeecc-------------------------hhhhChhcccCCEE
Confidence 78999998777799999999999999999999999996533 12334456899999
Q ss_pred EEcccchhhHHhHHhhhcccccccceeeeeeccccccch------------------------------hhhhhcccccc
Q 011954 155 VLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYFK------------------------------LEYVKHLPFVA 204 (474)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~------------------------------~~~~~~~~~~~ 204 (474)
|+|......+....+.... ...|+++++|+....... ..+........
T Consensus 56 h~~~~~~~~~~~~~~~~~~--~~~~~v~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (365)
T cd03825 56 HLHWIHGGFLSIEDLSKLL--DRKPVVWTLHDMWPFTGGCHYPGGCDRYKTECGNCPQLGSYPEKDLSRWIWRRKRKAWA 133 (365)
T ss_pred EEEccccCccCHHHHHHHH--cCCCEEEEcccCcccccccCCccccccccccCCCCCCCCCCCcccHHHHHHHHHHHHhc
Confidence 9987443332222222111 245889999975321100 00000000010
Q ss_pred cccccccccHHHHHHhHHHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEeccccc--C
Q 011954 205 GAMIDSYTTAEYWKNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSR--G 282 (474)
Q Consensus 205 ~~~~~s~~~~~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~--~ 282 (474)
.........+++..+.+.+.+.++..++.++|||+|.+.+.+.. +...++.++++.+..++++.|+... .
T Consensus 134 ~~~~~~v~~s~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 205 (365)
T cd03825 134 DLNLTIVAPSRWLADCARSSSLFKGIPIEVIPNGIDTTIFRPRD--------KREARKRLGLPADKKIILFGAVGGTDPR 205 (365)
T ss_pred cCCcEEEehhHHHHHHHHhccccCCCceEEeCCCCcccccCCCc--------HHHHHHHhCCCCCCeEEEEEecCCCccc
Confidence 11112233344444444444556778999999999999886543 3456777888888888877777765 8
Q ss_pred cchHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCCC---ChHHHHhcCCE
Q 011954 283 KGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTL---TVSPYLASIDV 359 (474)
Q Consensus 283 Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~---~~~~~~~~adv 359 (474)
||++.+++++..+.+. ..++++++++|+++. ... .++..++.++|+.. ++..+|+.||+
T Consensus 206 K~~~~ll~a~~~l~~~------~~~~~~~~i~G~~~~-----~~~-------~~~~~~v~~~g~~~~~~~~~~~~~~ad~ 267 (365)
T cd03825 206 KGFDELIEALKRLAER------WKDDIELVVFGASDP-----EIP-------PDLPFPVHYLGSLNDDESLALIYSAADV 267 (365)
T ss_pred cCHHHHHHHHHHhhhc------cCCCeEEEEeCCCch-----hhh-------ccCCCceEecCCcCCHHHHHHHHHhCCE
Confidence 9999999999988542 137899999999851 111 14457899999864 68899999999
Q ss_pred EEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCcceeeeeCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHH
Q 011954 360 LVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYE 439 (474)
Q Consensus 360 ~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~ 439 (474)
+++||. .|++|++++|||+||+|||+++.||..|++.++.+|++++..| +++++++|.+++++++.+.+|++++++
T Consensus 268 ~l~ps~--~e~~g~~~~Eam~~g~PvI~~~~~~~~e~~~~~~~g~~~~~~~--~~~~~~~l~~l~~~~~~~~~~~~~~~~ 343 (365)
T cd03825 268 FVVPSL--QENFPNTAIEALACGTPVVAFDVGGIPDIVDHGVTGYLAKPGD--PEDLAEGIEWLLADPDEREELGEAARE 343 (365)
T ss_pred EEeccc--cccccHHHHHHHhcCCCEEEecCCCChhheeCCCceEEeCCCC--HHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 999999 8999999999999999999999999999999988999999988 999999999999999999999999999
Q ss_pred HHHHhcCHHHHHHHHHHHHHHH
Q 011954 440 RVKDRFLEHHMSQRIALVLREV 461 (474)
Q Consensus 440 ~~~~~fs~~~~~~~~~~~~~~~ 461 (474)
.+.++|||+.++++|.++|+++
T Consensus 344 ~~~~~~s~~~~~~~~~~~y~~~ 365 (365)
T cd03825 344 LAENEFDSRVQAKRYLSLYEEL 365 (365)
T ss_pred HHHHhcCHHHHHHHHHHHHhhC
Confidence 9999999999999999999863
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. |
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-39 Score=311.73 Aligned_cols=329 Identities=17% Similarity=0.169 Sum_probs=244.5
Q ss_pred EEEEEecCCCCCChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhcccchhccceeeee-----------hhcHHH
Q 011954 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEHKMLDRGVQVLS-----------AKGEKA 144 (474)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~ 144 (474)
||+++++.+..||+++++.+++++|.+.||+|++++........ .......++.++. ......
T Consensus 1 kIl~~~~~~~~GG~~~~~~~l~~~L~~~~~~v~~i~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (358)
T cd03812 1 KILHIVGTMNRGGIETFIMNYYRNLDRSKIQFDFLVTSKEEGDY------DDEIEKLGGKIYYIPARKKNPLKYFKKLYK 74 (358)
T ss_pred CEEEEeCCCCCccHHHHHHHHHHhcCccceEEEEEEeCCCCcch------HHHHHHcCCeEEEecCCCccHHHHHHHHHH
Confidence 69999998888999999999999999999999999965443211 1111122222221 112333
Q ss_pred HhhhcCCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccccch--hh------hhhcccccccccccccccHHH
Q 011954 145 INTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYFK--LE------YVKHLPFVAGAMIDSYTTAEY 216 (474)
Q Consensus 145 ~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~--~~------~~~~~~~~~~~~~~s~~~~~~ 216 (474)
+....+||+||+|+.....+....... . ..+.++.+.|........ .. ........+..++.+....+.
T Consensus 75 ~~~~~~~Dvv~~~~~~~~~~~~~~~~~-~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~ 151 (358)
T cd03812 75 LIKKNKYDIVHVHGSSASGFILLAAKK-A--GVKVRIAHSHNTSDSHDKKKKILKYKVLRKLINRLATDYLACSEEAGKW 151 (358)
T ss_pred HHhcCCCCEEEEeCcchhHHHHHHHhh-C--CCCeEEEEeccccccccccchhhHHHHHHHHHHhcCCEEEEcCHHHHHH
Confidence 445689999999987643333322221 1 123456667764322111 11 111223445555555554444
Q ss_pred HHHhHHHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHHHHHHHHHHH
Q 011954 217 WKNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESL 296 (474)
Q Consensus 217 ~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~ 296 (474)
+.. . ....++.+||||+|.+.+.+.... +.. ++..+...++++|+++||+.+.||++.+++|+..+.
T Consensus 152 ~~~----~--~~~~~~~vi~ngvd~~~~~~~~~~------~~~-~~~~~~~~~~~~i~~vGr~~~~Kg~~~li~a~~~l~ 218 (358)
T cd03812 152 LFG----K--VKNKKFKVIPNGIDLEKFIFNEEI------RKK-RRELGILEDKFVIGHVGRFSEQKNHEFLIEIFAELL 218 (358)
T ss_pred HHh----C--CCcccEEEEeccCcHHHcCCCchh------hhH-HHHcCCCCCCEEEEEEeccccccChHHHHHHHHHHH
Confidence 332 2 456789999999999887654322 112 556677788899999999999999999999999987
Q ss_pred HHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCCCChHHHHhcCCEEEEcCCCCCCCCchHHH
Q 011954 297 QLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYLASIDVLVQNSQARGECFGRITI 376 (474)
Q Consensus 297 ~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv~v~ps~~~~E~~~~~~~ 376 (474)
+ ++++++++|+|+|+ ....+++.++++++.++|.|+|+.+++.++|+.||++|+||. .|++|++++
T Consensus 219 ~-------~~~~~~l~ivG~g~-----~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~adi~v~ps~--~E~~~~~~l 284 (358)
T cd03812 219 K-------KNPNAKLLLVGDGE-----LEEEIKKKVKELGLEDKVIFLGVRNDVPELLQAMDVFLFPSL--YEGLPLVLI 284 (358)
T ss_pred H-------hCCCeEEEEEeCCc-----hHHHHHHHHHhcCCCCcEEEecccCCHHHHHHhcCEEEeccc--ccCCCHHHH
Confidence 6 45899999999996 678899999999999999999999999999999999999999 899999999
Q ss_pred HHHhcCCCEEEcCCCCcceeeeeCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHH
Q 011954 377 EAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKD 443 (474)
Q Consensus 377 EAma~G~PvI~s~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~ 443 (474)
|||++|+|||+|+.||..|++.+ ..|++..+++ +++++++|.++++|++.++.++..+......
T Consensus 285 EAma~G~PvI~s~~~~~~~~i~~-~~~~~~~~~~--~~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~ 348 (358)
T cd03812 285 EAQASGLPCILSDTITKEVDLTD-LVKFLSLDES--PEIWAEEILKLKSEDRRERSSESIKKKGLDA 348 (358)
T ss_pred HHHHhCCCEEEEcCCchhhhhcc-CccEEeCCCC--HHHHHHHHHHHHhCcchhhhhhhhhhccchh
Confidence 99999999999999999999977 5677776666 8999999999999999999998887766554
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). |
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-39 Score=313.58 Aligned_cols=338 Identities=20% Similarity=0.207 Sum_probs=251.9
Q ss_pred EEEEEecCCCCCChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhh--hhhcccc---hhc-----cceeeeehhcHHHH
Q 011954 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEV--IYSLEHK---MLD-----RGVQVLSAKGEKAI 145 (474)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~--~~~~~~~---~~~-----~~~~~~~~~~~~~~ 145 (474)
||+++.+.+.++ +++++.++++.|. |++|++++.......... ....... ... .............+
T Consensus 1 ~~~~~~~~~~~~-~e~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (367)
T cd05844 1 RVLIFRPLLLAP-SETFVRNQAEALR--RFRPVYVGGRRLGPAPLGALAVRLADLAGGKAGLRLGALRLLTGSAPQLRRL 77 (367)
T ss_pred CEEEEeCCCCCC-chHHHHHHHHhcc--cCCcEEEEeeccCCCCCcccceeeeecccchhHHHHHHHHhccccccHHHHH
Confidence 478888876665 6899999999995 788888875433221110 0000000 000 00001111223345
Q ss_pred hhhcCCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccccch------------hhhhhccccccccccccccc
Q 011954 146 NTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYFK------------LEYVKHLPFVAGAMIDSYTT 213 (474)
Q Consensus 146 ~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~------------~~~~~~~~~~~~~~~~s~~~ 213 (474)
.+..+||+||+|....+.......+. ...|++++.|+....... ......++.++.+++.+...
T Consensus 78 ~~~~~~dvvh~~~~~~~~~~~~~~~~----~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~ 153 (367)
T cd05844 78 LRRHRPDLVHAHFGFDGVYALPLARR----LGVPLVVTFHGFDATTSLALLLRSRWALYARRRRRLARRAALFIAVSQFI 153 (367)
T ss_pred HHhhCCCEEEeccCchHHHHHHHHHH----cCCCEEEEEeCccccccchhhcccchhHHHHHHHHHHHhcCEEEECCHHH
Confidence 66789999999976554443333222 346888888864321111 11122234556666666555
Q ss_pred HHHHHHhHHHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHHHHHHHH
Q 011954 214 AEYWKNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFY 293 (474)
Q Consensus 214 ~~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~ 293 (474)
.+.+. .++++..++.+++||+|.+.+.+... ..++.+++++|++.+.||++.+++|+.
T Consensus 154 ~~~~~-----~~~~~~~~i~vi~~g~d~~~~~~~~~-----------------~~~~~~i~~~G~~~~~K~~~~li~a~~ 211 (367)
T cd05844 154 RDRLL-----ALGFPPEKVHVHPIGVDTAKFTPATP-----------------ARRPPRILFVGRFVEKKGPLLLLEAFA 211 (367)
T ss_pred HHHHH-----HcCCCHHHeEEecCCCCHHhcCCCCC-----------------CCCCcEEEEEEeeccccChHHHHHHHH
Confidence 44443 23777788999999999887764321 245678999999999999999999999
Q ss_pred HHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCC--CChHHHHhcCCEEEEcCCC----C
Q 011954 294 ESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKT--LTVSPYLASIDVLVQNSQA----R 367 (474)
Q Consensus 294 ~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~--~~~~~~~~~adv~v~ps~~----~ 367 (474)
.+.+ ++++++|+|+|+|+ +.++++++++++++.++|+|+|++ +++..+|+.||++|+||.+ .
T Consensus 212 ~l~~-------~~~~~~l~ivG~g~-----~~~~~~~~~~~~~~~~~v~~~g~~~~~~l~~~~~~ad~~v~ps~~~~~~~ 279 (367)
T cd05844 212 RLAR-------RVPEVRLVIIGDGP-----LLAALEALARALGLGGRVTFLGAQPHAEVRELMRRARIFLQPSVTAPSGD 279 (367)
T ss_pred HHHH-------hCCCeEEEEEeCch-----HHHHHHHHHHHcCCCCeEEECCCCCHHHHHHHHHhCCEEEECcccCCCCC
Confidence 8865 44899999999985 778899999999999999999986 6799999999999999963 1
Q ss_pred CCCCchHHHHHHhcCCCEEEcCCCCcceeeeeCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCH
Q 011954 368 GECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRFLE 447 (474)
Q Consensus 368 ~E~~~~~~~EAma~G~PvI~s~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~fs~ 447 (474)
.||+|++++|||+||+|||+++.+|..|++.++.+|++++++| +++++++|.++++|++.+++|++++++++.++|||
T Consensus 280 ~E~~~~~~~EA~a~G~PvI~s~~~~~~e~i~~~~~g~~~~~~d--~~~l~~~i~~l~~~~~~~~~~~~~a~~~~~~~~s~ 357 (367)
T cd05844 280 AEGLPVVLLEAQASGVPVVATRHGGIPEAVEDGETGLLVPEGD--VAALAAALGRLLADPDLRARMGAAGRRRVEERFDL 357 (367)
T ss_pred ccCCchHHHHHHHcCCCEEEeCCCCchhheecCCeeEEECCCC--HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHCCH
Confidence 4999999999999999999999999999999999999999988 99999999999999999999999999999999999
Q ss_pred HHHHHHHHH
Q 011954 448 HHMSQRIAL 456 (474)
Q Consensus 448 ~~~~~~~~~ 456 (474)
+.+++++.+
T Consensus 358 ~~~~~~l~~ 366 (367)
T cd05844 358 RRQTAKLEA 366 (367)
T ss_pred HHHHHHHhc
Confidence 999999875
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=313.17 Aligned_cols=337 Identities=23% Similarity=0.254 Sum_probs=248.8
Q ss_pred CChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhcccchhccceeeeeh---------------------hcHHHH
Q 011954 87 SGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEHKMLDRGVQVLSA---------------------KGEKAI 145 (474)
Q Consensus 87 gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~ 145 (474)
||+++++.+|+++|+++||+|+|++........... ....++.+... ......
T Consensus 21 GG~~~~~~~l~~~L~~~g~~V~v~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (398)
T cd03800 21 GGQNVYVLELARALARLGHEVDIFTRRIDDALPPIV------ELAPGVRVVRVPAGPAEYLPKEELWPYLDEFADDLLRF 94 (398)
T ss_pred CceeehHHHHHHHHhccCceEEEEEecCCcccCCcc------ccccceEEEecccccccCCChhhcchhHHHHHHHHHHH
Confidence 788999999999999999999999954332211100 00111111110 011122
Q ss_pred hhhc--CCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccccchh--------------hhhhccccccccccc
Q 011954 146 NTAL--NADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYFKL--------------EYVKHLPFVAGAMID 209 (474)
Q Consensus 146 ~~~~--~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~--------------~~~~~~~~~~~~~~~ 209 (474)
.... +||+||+|....+........ . ...|++++.|+........ .....+...+.+++.
T Consensus 95 ~~~~~~~~Div~~~~~~~~~~~~~~~~-~---~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~ 170 (398)
T cd03800 95 LRREGGRPDLIHAHYWDSGLVALLLAR-R---LGIPLVHTFHSLGAVKRRHLGAADTYEPARRIEAEERLLRAADRVIAS 170 (398)
T ss_pred HHhcCCCccEEEEecCccchHHHHHHh-h---cCCceEEEeecccccCCcccccccccchhhhhhHHHHHHhhCCEEEEc
Confidence 2334 999999997554433222221 1 2357888888753211110 011223345555555
Q ss_pred ccccHHHHHHhHHHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHHHH
Q 011954 210 SYTTAEYWKNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFL 289 (474)
Q Consensus 210 s~~~~~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~ll 289 (474)
+....+. +.+.++....++.+||||+|.+.+.+.... ...++.++.+.++++|+++||+.+.||++.++
T Consensus 171 s~~~~~~----~~~~~~~~~~~~~vi~ng~~~~~~~~~~~~-------~~~~~~~~~~~~~~~i~~~gr~~~~k~~~~ll 239 (398)
T cd03800 171 TPQEAEE----LYSLYGAYPRRIRVVPPGVDLERFTPYGRA-------EARRARLLRDPDKPRILAVGRLDPRKGIDTLI 239 (398)
T ss_pred CHHHHHH----HHHHccccccccEEECCCCCccceecccch-------hhHHHhhccCCCCcEEEEEcccccccCHHHHH
Confidence 5444333 444455556679999999999888655422 11245556667789999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCch-HHHHHHHHHHHcCCCCeEEEecCC--CChHHHHhcCCEEEEcCCC
Q 011954 290 HSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTK-FETELRNFVAEKKIQDHVHFVNKT--LTVSPYLASIDVLVQNSQA 366 (474)
Q Consensus 290 ~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~-~~~~l~~~~~~~~l~~~v~~~g~~--~~~~~~~~~adv~v~ps~~ 366 (474)
+++..+.+ +.++++|+++|+++..... ....++++++++++.+++.|+|++ +++..+|+.||++++||.
T Consensus 240 ~a~~~l~~-------~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~adi~l~ps~- 311 (398)
T cd03800 240 RAYAELPE-------LRERANLVIVGGPRDDILAMDEEELRELARELGVIDRVDFPGRVSREDLPALYRAADVFVNPAL- 311 (398)
T ss_pred HHHHHHHH-------hCCCeEEEEEECCCCcchhhhhHHHHHHHHhcCCCceEEEeccCCHHHHHHHHHhCCEEEeccc-
Confidence 99998865 3478999999998643322 345678888999999999999985 689999999999999998
Q ss_pred CCCCCchHHHHHHhcCCCEEEcCCCCcceeeeeCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcC
Q 011954 367 RGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRFL 446 (474)
Q Consensus 367 ~~E~~~~~~~EAma~G~PvI~s~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~fs 446 (474)
.|++|++++|||++|+|||+++.+|..|++.++++|++++++| +++++++|.+++++++.+++|++++++++.++||
T Consensus 312 -~e~~~~~l~Ea~a~G~Pvi~s~~~~~~e~i~~~~~g~~~~~~~--~~~l~~~i~~l~~~~~~~~~~~~~a~~~~~~~~s 388 (398)
T cd03800 312 -YEPFGLTALEAMACGLPVVATAVGGPRDIVVDGVTGLLVDPRD--PEALAAALRRLLTDPALRRRLSRAGLRRARARYT 388 (398)
T ss_pred -ccccCcHHHHHHhcCCCEEECCCCCHHHHccCCCCeEEeCCCC--HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCC
Confidence 8999999999999999999999999999999999999999998 9999999999999999999999999999989999
Q ss_pred HHHHHHHHH
Q 011954 447 EHHMSQRIA 455 (474)
Q Consensus 447 ~~~~~~~~~ 455 (474)
|+.++++|+
T Consensus 389 ~~~~~~~~~ 397 (398)
T cd03800 389 WERVAARLL 397 (398)
T ss_pred HHHHHHHHh
Confidence 999999886
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. |
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-39 Score=308.07 Aligned_cols=321 Identities=17% Similarity=0.120 Sum_probs=230.9
Q ss_pred CEEEEEecCC------CCCChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhcccchhc--cce---eeeehhcHH
Q 011954 75 KLVLLVSHEL------SLSGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEHKMLD--RGV---QVLSAKGEK 143 (474)
Q Consensus 75 ~kIl~v~~~~------~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~--~~~---~~~~~~~~~ 143 (474)
|||+++++.+ ..||+++++.+|+++|.+.||+|++++...+................ ... .........
T Consensus 1 MkI~~i~~~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (335)
T cd03802 1 MRIALVAPPREPVPPPAYGGTERVVAALTEGLVARGHEVTLFASGDSKTAAPLVPVVPEPLRLDAPGRDRAEAEALALAE 80 (335)
T ss_pred CeEEEEcCCcccCCCcccCcHHHHHHHHHHHHHhcCceEEEEecCCCCcccceeeccCCCcccccchhhHhhHHHHHHHH
Confidence 7999999876 34888999999999999999999999966543221110000000000 000 001112334
Q ss_pred HHhhhcCCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccccchhhhhhcccccccccccccccHHHHHHhHHH
Q 011954 144 AINTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYFKLEYVKHLPFVAGAMIDSYTTAEYWKNRTRE 223 (474)
Q Consensus 144 ~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 223 (474)
.+.+..+||+||+|+.....+ . . .....|++++.|+........ ........+..++.+....+.+.
T Consensus 81 ~~~~~~~~Divh~~~~~~~~~--~-~----~~~~~~~v~~~h~~~~~~~~~-~~~~~~~~~~~~~~s~~~~~~~~----- 147 (335)
T cd03802 81 RALAAGDFDIVHNHSLHLPLP--F-A----RPLPVPVVTTLHGPPDPELLK-LYYAARPDVPFVSISDAQRRPWP----- 147 (335)
T ss_pred HHHhcCCCCEEEecCcccchh--h-h----cccCCCEEEEecCCCCcccch-HHHhhCcCCeEEEecHHHHhhcc-----
Confidence 555678999999998766554 1 1 113358899999775433322 22222333334444433333221
Q ss_pred HhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHHHHHHHHHHHHHHHHhc
Q 011954 224 RLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKK 303 (474)
Q Consensus 224 ~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~ 303 (474)
...++.+||||+|.+.|.+.. .++..++++||+.+.||++.+++++++
T Consensus 148 ----~~~~~~vi~ngvd~~~~~~~~-------------------~~~~~i~~~Gr~~~~Kg~~~li~~~~~--------- 195 (335)
T cd03802 148 ----PLPWVATVHNGIDLDDYPFRG-------------------PKGDYLLFLGRISPEKGPHLAIRAARR--------- 195 (335)
T ss_pred ----cccccEEecCCcChhhCCCCC-------------------CCCCEEEEEEeeccccCHHHHHHHHHh---------
Confidence 116899999999998876421 345678899999999999999998753
Q ss_pred cCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcC-CCCeEEEecCC--CChHHHHhcCCEEEEcCCCCCCCCchHHHHHHh
Q 011954 304 LQVPSMHAVVVGSDMNAQTKFETELRNFVAEKK-IQDHVHFVNKT--LTVSPYLASIDVLVQNSQARGECFGRITIEAMA 380 (474)
Q Consensus 304 ~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~-l~~~v~~~g~~--~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma 380 (474)
.+++|+|+|+|+ ....+.....+.. +.++|+|+|+. +++..+|+.+|++|+||.+ .|+||++++|||+
T Consensus 196 ---~~~~l~i~G~~~-----~~~~~~~~~~~~~~~~~~v~~~G~~~~~~~~~~~~~~d~~v~ps~~-~E~~~~~~lEAma 266 (335)
T cd03802 196 ---AGIPLKLAGPVS-----DPDYFYREIAPELLDGPDIEYLGEVGGAEKAELLGNARALLFPILW-EEPFGLVMIEAMA 266 (335)
T ss_pred ---cCCeEEEEeCCC-----CHHHHHHHHHHhcccCCcEEEeCCCCHHHHHHHHHhCcEEEeCCcc-cCCcchHHHHHHh
Confidence 578999999986 3444444444443 56899999986 5678999999999999984 6999999999999
Q ss_pred cCCCEEEcCCCCcceeeeeCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 011954 381 FQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRFLEHHMSQRIALVLR 459 (474)
Q Consensus 381 ~G~PvI~s~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~ 459 (474)
||+|||+++.||..|++.++.+|+++++ +++++++|.++.+.+ .+++++.+.++|||+.++++|+++|+
T Consensus 267 ~G~PvI~~~~~~~~e~i~~~~~g~l~~~----~~~l~~~l~~l~~~~------~~~~~~~~~~~~s~~~~~~~~~~~y~ 335 (335)
T cd03802 267 CGTPVIAFRRGAVPEVVEDGVTGFLVDS----VEELAAAVARADRLD------RAACRRRAERRFSAARMVDDYLALYR 335 (335)
T ss_pred cCCCEEEeCCCCchhheeCCCcEEEeCC----HHHHHHHHHHHhccH------HHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 9999999999999999999999999986 799999999986543 35677888899999999999999984
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. |
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-38 Score=306.48 Aligned_cols=354 Identities=19% Similarity=0.164 Sum_probs=252.0
Q ss_pred EEEEEecCCC-CCChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhcccchhccceeeeehhcHHHHhhhcCCCEE
Q 011954 76 LVLLVSHELS-LSGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEHKMLDRGVQVLSAKGEKAINTALNADLV 154 (474)
Q Consensus 76 kIl~v~~~~~-~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DiV 154 (474)
||+|+++..+ .||.++++.+|+++|.+.||+|.+++...................................+..+||+|
T Consensus 1 kI~~v~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dii 80 (366)
T cd03822 1 RIALVSPYPPRKCGIATFTTDLVNALSARGPDVLVVSVAALYPSLLYGGEQEVVRVIVLDNPLDYRRAARAIRLSGPDVV 80 (366)
T ss_pred CeEEecCCCCCCCcHHHHHHHHHHHhhhcCCeEEEEEeecccCcccCCCcccceeeeecCCchhHHHHHHHHhhcCCCEE
Confidence 6999999877 488899999999999999999999985443221111100000000000111122234455667899999
Q ss_pred EEcccch--hhHHhHHhhhcccccccceeeeeeccccccc----hhhhhhcccccccccccccccHHHHHHhHHHHhcCC
Q 011954 155 VLNTAVA--GKWLDGVLKDKVSQVLPKVLWWIHEMRGHYF----KLEYVKHLPFVAGAMIDSYTTAEYWKNRTRERLGIR 228 (474)
Q Consensus 155 ~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~----~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 228 (474)
|++.... +................++++++|+...... .......++.++.+++.| .+..++... .. .
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~d~ii~~s---~~~~~~~~~-~~--~ 154 (366)
T cd03822 81 VIQHEYGIFGGEAGLYLLLLLRGLGIPVVVTLHTVLLHEPRPGDRALLRLLLRRADAVIVMS---SELLRALLL-RA--Y 154 (366)
T ss_pred EEeeccccccchhhHHHHHHHhhcCCCEEEEEecCCccccchhhhHHHHHHHhcCCEEEEee---HHHHHHHHh-hc--C
Confidence 9976211 1111111111111234689999998621111 112233456677777775 233232221 11 1
Q ss_pred CCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHHHHHHHHHHHHHHHHhccCCCc
Q 011954 229 MPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPS 308 (474)
Q Consensus 229 ~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~~ 308 (474)
..++.+||||++...+..... .+....+.+.++++++|++.+.||++.+++|+.++.+ ++++
T Consensus 155 ~~~~~~i~~~~~~~~~~~~~~-----------~~~~~~~~~~~~i~~~G~~~~~K~~~~ll~a~~~~~~-------~~~~ 216 (366)
T cd03822 155 PEKIAVIPHGVPDPPAEPPES-----------LKALGGLDGRPVLLTFGLLRPYKGLELLLEALPLLVA-------KHPD 216 (366)
T ss_pred CCcEEEeCCCCcCcccCCchh-----------hHhhcCCCCCeEEEEEeeccCCCCHHHHHHHHHHHHh-------hCCC
Confidence 478999999999877654321 0233345677899999999999999999999998866 4489
Q ss_pred EEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecC---CCChHHHHhcCCEEEEcCCCCCC--CCchHHHHHHhcCC
Q 011954 309 MHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNK---TLTVSPYLASIDVLVQNSQARGE--CFGRITIEAMAFQL 383 (474)
Q Consensus 309 ~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~---~~~~~~~~~~adv~v~ps~~~~E--~~~~~~~EAma~G~ 383 (474)
++|+|+|++............++++++++.++|.|+|. .+++.++|+.||++++||. .| ++|++++|||+||+
T Consensus 217 ~~l~i~G~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~~~~~~~~~~~~~ad~~v~ps~--~e~~~~~~~~~Ea~a~G~ 294 (366)
T cd03822 217 VRLLVAGETHPDLERYRGEAYALAERLGLADRVIFINRYLPDEELPELFSAADVVVLPYR--SADQTQSGVLAYAIGFGK 294 (366)
T ss_pred eEEEEeccCccchhhhhhhhHhHHHhcCCCCcEEEecCcCCHHHHHHHHhhcCEEEeccc--ccccccchHHHHHHHcCC
Confidence 99999999863221111111134788899999999986 4789999999999999999 78 99999999999999
Q ss_pred CEEEcCCCCcceeeeeCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 011954 384 PVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRFLEHHMSQRIALVLR 459 (474)
Q Consensus 384 PvI~s~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~ 459 (474)
|||+++.|+ .+.+.++.+|++++++| +++++++|..+++|++.+.+|++++++++.+ |||+.+++++.++|+
T Consensus 295 PvI~~~~~~-~~~i~~~~~g~~~~~~d--~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~-~s~~~~~~~~~~~~~ 366 (366)
T cd03822 295 PVISTPVGH-AEEVLDGGTGLLVPPGD--PAALAEAIRRLLADPELAQALRARAREYARA-MSWERVAERYLRLLA 366 (366)
T ss_pred CEEecCCCC-hheeeeCCCcEEEcCCC--HHHHHHHHHHHHcChHHHHHHHHHHHHHHhh-CCHHHHHHHHHHHhC
Confidence 999999999 77777888999999998 9999999999999999999999999999988 999999999999874
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. |
| >PLN02949 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-38 Score=309.85 Aligned_cols=354 Identities=18% Similarity=0.157 Sum_probs=249.0
Q ss_pred cCEEEEEecCCCCC-ChhHHHHHHHHHHHhcCc--EEEEEeCCCCCCchhh----hhhcccchhccceeeeeh-------
Q 011954 74 SKLVLLVSHELSLS-GGPLLLMELAFLLRGVGA--EVVWITNQKPNEPDEV----IYSLEHKMLDRGVQVLSA------- 139 (474)
Q Consensus 74 ~~kIl~v~~~~~~g-G~~~~~~~l~~~L~~~G~--~V~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~------- 139 (474)
+++|+|++++.+.| |+||++.+.+.+|++.|+ +|.+.|.+.+....+. ...+.-.+. ....++..
T Consensus 33 ~~~v~f~HP~~~~ggG~ERvl~~a~~~l~~~~~~~~v~iyt~~~d~~~~~~l~~~~~~~~i~~~-~~~~~v~l~~~~~~~ 111 (463)
T PLN02949 33 KRAVGFFHPYTNDGGGGERVLWCAVRAIQEENPDLDCVIYTGDHDASPDSLAARARDRFGVELL-SPPKVVHLRKRKWIE 111 (463)
T ss_pred CcEEEEECCCCCCCCChhhHHHHHHHHHHhhCCCCeEEEEcCCCCCCHHHHHHHHHhhcceecC-CCceEEEeccccccc
Confidence 46799999999886 889999999999999998 7888886644433331 111111111 01111111
Q ss_pred ----h----------cH---HHHhhhcCCCEEEEcccchhhHHhHHhhhcccccccceeeeeecccccc-----------
Q 011954 140 ----K----------GE---KAINTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHY----------- 191 (474)
Q Consensus 140 ----~----------~~---~~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~----------- 191 (474)
. .. ........|| |++.+.....++.. ++ . ...+++.++|......
T Consensus 112 ~~~~~~~t~~~~~~~~~~l~~~~~~~~~p~-v~vDt~~~~~~~pl-~~-~---~~~~v~~yvH~p~~~~dm~~~v~~~~~ 185 (463)
T PLN02949 112 EETYPRFTMIGQSLGSVYLAWEALCKFTPL-YFFDTSGYAFTYPL-AR-L---FGCKVVCYTHYPTISSDMISRVRDRSS 185 (463)
T ss_pred cccCCceehHHHHHHHHHHHHHHHHhcCCC-EEEeCCCcccHHHH-HH-h---cCCcEEEEEeCCcchHHHHHHHhhccc
Confidence 0 00 0111123454 55555332211111 11 1 1368999999542110
Q ss_pred ----------------chhhhhhc--------ccccccccccccccHHHHHHhHHHHhcCCCCCeEEEeCCCCccccchh
Q 011954 192 ----------------FKLEYVKH--------LPFVAGAMIDSYTTAEYWKNRTRERLGIRMPETYVVHLGNSKDLMDIA 247 (474)
Q Consensus 192 ----------------~~~~~~~~--------~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~ 247 (474)
.+..+.+. ...++.++++|..+.+.+. +.++. ..++.+++||+|.+.+...
T Consensus 186 ~~~~~~~~a~~~~~~~~k~~Y~~~~~~l~~~~~~~ad~ii~nS~~t~~~l~----~~~~~-~~~i~vvyp~vd~~~~~~~ 260 (463)
T PLN02949 186 MYNNDASIARSFWLSTCKILYYRAFAWMYGLVGRCAHLAMVNSSWTKSHIE----ALWRI-PERIKRVYPPCDTSGLQAL 260 (463)
T ss_pred ccCccchhhccchhHHHHHHHHHHHHHHHHHHcCCCCEEEECCHHHHHHHH----HHcCC-CCCeEEEcCCCCHHHcccC
Confidence 00001111 1445566666666655543 33443 3578999999997755321
Q ss_pred hhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCc-CchHHH
Q 011954 248 EDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNA-QTKFET 326 (474)
Q Consensus 248 ~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~-~~~~~~ 326 (474)
+.. .+.+...++++||+.++||++.+|+|++++.+.+.+ +.++++|+|+|+++.. +.++.+
T Consensus 261 ~~~---------------~~~~~~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~---~~~~~~LvIvG~~~~~~~~~~~~ 322 (463)
T PLN02949 261 PLE---------------RSEDPPYIISVAQFRPEKAHALQLEAFALALEKLDA---DVPRPKLQFVGSCRNKEDEERLQ 322 (463)
T ss_pred Ccc---------------ccCCCCEEEEEEeeeccCCHHHHHHHHHHHHHhccc---cCCCcEEEEEeCCCCcccHHHHH
Confidence 100 013456788999999999999999999988664432 2378999999998532 223568
Q ss_pred HHHHHHHHcCCCCeEEEecCC--CChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCc-ceeeee---C
Q 011954 327 ELRNFVAEKKIQDHVHFVNKT--LTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGT-MEIVVN---G 400 (474)
Q Consensus 327 ~l~~~~~~~~l~~~v~~~g~~--~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~-~e~v~~---~ 400 (474)
+++++++++++.++|+|+|+. +++.++|+.||++|+||. .|+||++++|||++|+|||+++.||. .|++.+ +
T Consensus 323 eL~~la~~l~L~~~V~f~g~v~~~el~~ll~~a~~~v~~s~--~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~~~g 400 (463)
T PLN02949 323 KLKDRAKELGLDGDVEFHKNVSYRDLVRLLGGAVAGLHSMI--DEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDEDGQ 400 (463)
T ss_pred HHHHHHHHcCCCCcEEEeCCCCHHHHHHHHHhCcEEEeCCc--cCCCChHHHHHHHcCCcEEEeCCCCCcceeeecCCCC
Confidence 899999999999999999986 789999999999999998 89999999999999999999999997 478765 5
Q ss_pred CceeeecCCCCChHHHHHHHHHHhh-CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhh
Q 011954 401 TTGLLHPTGKEGVTPLANNIVKLAT-HVERRLTMGKKGYERVKDRFLEHHMSQRIALVLREVLQY 464 (474)
Q Consensus 401 ~~G~l~~~~d~~~~~la~~i~~ll~-~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~~ 464 (474)
.+|++++ | +++++++|.++++ +++.+++|++++++++. +|||+++++++.+.|+++++.
T Consensus 401 ~tG~l~~--~--~~~la~ai~~ll~~~~~~r~~m~~~ar~~~~-~FS~e~~~~~~~~~i~~l~~~ 460 (463)
T PLN02949 401 QTGFLAT--T--VEEYADAILEVLRMRETERLEIAAAARKRAN-RFSEQRFNEDFKDAIRPILNS 460 (463)
T ss_pred cccccCC--C--HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH-HcCHHHHHHHHHHHHHHHHhh
Confidence 6899985 5 9999999999998 67889999999999985 599999999999999998865
|
|
| >PRK10125 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-39 Score=311.13 Aligned_cols=338 Identities=12% Similarity=0.070 Sum_probs=224.1
Q ss_pred CEEEEEecCCCCCChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhh-hhhccc-------------chh--cccee-ee
Q 011954 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEV-IYSLEH-------------KML--DRGVQ-VL 137 (474)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~-~~~~~~-------------~~~--~~~~~-~~ 137 (474)
||||++......||+|+.+.+|++.|.++||+|.++........... ...... ... ..+.. +.
T Consensus 1 mkil~i~~~l~~GGaeri~~~L~~~l~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (405)
T PRK10125 1 MNILQFNVRLAEGGAAGVALDLHQRALQQGLASHFVYGYGKGGKESVSHQNYPQVIKHTPRMTAMANIALFRLFNRDLFG 80 (405)
T ss_pred CeEEEEEeeecCCchhHHHHHHHHHHHhcCCeEEEEEecCCCcccccccCCcceEEEecccHHHHHHHHHHHhcchhhcc
Confidence 79999999999999999999999999999999999985543222100 000000 000 00000 01
Q ss_pred ehhcHHH-HhhhcCCCEEEEcccchhhH-HhHHhh----hcccccccceeeeeecccccc-----ch--hhhh-------
Q 011954 138 SAKGEKA-INTALNADLVVLNTAVAGKW-LDGVLK----DKVSQVLPKVLWWIHEMRGHY-----FK--LEYV------- 197 (474)
Q Consensus 138 ~~~~~~~-~~~~~~~DiV~~~~~~~~~~-~~~~~~----~~~~~~~~~~v~~~h~~~~~~-----~~--~~~~------- 197 (474)
......+ +.+..+|||||+|......+ +..++. ..+.....|++|+.|+++... .. ..|.
T Consensus 81 ~~~~~~~~i~~~~~pDviHlH~~~~~~~~~~~l~~~~~~~~~~~~~~piV~TlHd~~~~tg~c~~~~~C~~~~~~c~~Cp 160 (405)
T PRK10125 81 NFNELYRTITRTPGPVVLHFHVLHSYWLNLKSVVRFCEKVKNHKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKTGCQKCP 160 (405)
T ss_pred hHHHHHHHHhhccCCCEEEEecccCceecHHHHHHHHhhhhcccCCCCEEEecccccccCCCcCCCcccccccccCCCCC
Confidence 1112222 32568999999997554221 111111 012223469999999976321 00 0000
Q ss_pred ------------------hc---ccccccccccccccHHHHHHhHHHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHh
Q 011954 198 ------------------KH---LPFVAGAMIDSYTTAEYWKNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVL 256 (474)
Q Consensus 198 ------------------~~---~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~ 256 (474)
.. +..+........+.++++++.+...++ ..++.|||||+|.+.+.+.+..
T Consensus 161 ~l~~~~~~~~d~~~~~~~~k~~~~~~~~~~~~~iV~~S~~l~~~~~~~~~--~~~i~vI~NGid~~~~~~~~~~------ 232 (405)
T PRK10125 161 TLNNYPPVKVDRAHQLVAGKRQLFREMLALGCQFISPSQHVADAFNSLYG--PGRCRIINNGIDMATEAILAEL------ 232 (405)
T ss_pred CccCCCCCccchHHHHHHHHHHHHHHHhhcCcEEEEcCHHHHHHHHHHcC--CCCEEEeCCCcCcccccccccc------
Confidence 00 011000011223445555555444444 4789999999997543322110
Q ss_pred HHHHHHhcCCCCCCEEEEEeccc--ccCcchHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHH
Q 011954 257 REHVRESLGVRDDDLLFAIINSV--SRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAE 334 (474)
Q Consensus 257 ~~~~r~~~~~~~~~~~i~~vgrl--~~~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~ 334 (474)
... ..+.++.+++++|+. .+.||++.+++|+..+. ++++|+|+|+|++. .
T Consensus 233 -~~~----~~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l~----------~~~~L~ivG~g~~~-----~-------- 284 (405)
T PRK10125 233 -PPV----RETQGKPKIAVVAHDLRYDGKTDQQLVREMMALG----------DKIELHTFGKFSPF-----T-------- 284 (405)
T ss_pred -ccc----ccCCCCCEEEEEEeccccCCccHHHHHHHHHhCC----------CCeEEEEEcCCCcc-----c--------
Confidence 000 113466788999994 36899999999998751 57999999987421 0
Q ss_pred cCCCCeEEEecCC---CChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCcceeeeeCCceeeecCCCC
Q 011954 335 KKIQDHVHFVNKT---LTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKE 411 (474)
Q Consensus 335 ~~l~~~v~~~g~~---~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~~e~v~~~~~G~l~~~~d~ 411 (474)
.+++.++|.. +++.++|+.+|+||+||. .|+||++++||||||+|||+|++||++|++.++ +|++++++|
T Consensus 285 ---~~~v~~~g~~~~~~~l~~~y~~aDvfV~pS~--~Egfp~vilEAmA~G~PVVat~~gG~~Eiv~~~-~G~lv~~~d- 357 (405)
T PRK10125 285 ---AGNVVNHGFETDKRKLMSALNQMDALVFSSR--VDNYPLILCEALSIGVPVIATHSDAAREVLQKS-GGKTVSEEE- 357 (405)
T ss_pred ---ccceEEecCcCCHHHHHHHHHhCCEEEECCc--cccCcCHHHHHHHcCCCEEEeCCCChHHhEeCC-cEEEECCCC-
Confidence 1468888864 568899999999999999 899999999999999999999999999999765 999999999
Q ss_pred ChHHHHHHHHHHhhCHHHHHH----HHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Q 011954 412 GVTPLANNIVKLATHVERRLT----MGKKGYERVKDRFLEHHMSQRIALVLREV 461 (474)
Q Consensus 412 ~~~~la~~i~~ll~~~~~~~~----~~~~~~~~~~~~fs~~~~~~~~~~~~~~~ 461 (474)
+++|++++ +++.+++ +.+++++++.++||++.++++|+++|+++
T Consensus 358 -~~~La~~~-----~~~~~~~~~~~~~~~~r~~~~~~fs~~~~~~~y~~lY~~l 405 (405)
T PRK10125 358 -VLQLAQLS-----KPEIAQAVFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQNL 405 (405)
T ss_pred -HHHHHhcc-----CHHHHHHhhhhHHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 99999854 3343333 23568899999999999999999999863
|
|
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-38 Score=306.80 Aligned_cols=339 Identities=20% Similarity=0.176 Sum_probs=256.9
Q ss_pred EEEEEecCCCCCChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhh--hcccchhccceeee---ehhcHHHHhhhcC
Q 011954 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIY--SLEHKMLDRGVQVL---SAKGEKAINTALN 150 (474)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~--~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 150 (474)
|||++++.++++ +++++.+++++|.+.||+|++++............ ............+. .........+..+
T Consensus 1 ki~~~~~~~~~~-~~~~~~~~~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (355)
T cd03799 1 KIAYLVKEFPRL-SETFILREILALEAAGHEVEIFSLRPPEDTLVHPEDRAELARTRYLARSLALLAQALVLARELRRLG 79 (355)
T ss_pred CEEEECCCCCCc-chHHHHHHHHHHHhCCCeEEEEEecCcccccccccccccccchHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 699999988665 78999999999999999999999654432111000 00000000000000 0111223334589
Q ss_pred CCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccccchh--hhhhcccccccccccccccHHHHHHhHHHHhcCC
Q 011954 151 ADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYFKL--EYVKHLPFVAGAMIDSYTTAEYWKNRTRERLGIR 228 (474)
Q Consensus 151 ~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~--~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 228 (474)
+|+||+|.......+........ ..+++++.|+........ .....++.++.+++.+....+.+. ..++..
T Consensus 80 ~Dii~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~s~~~~~~l~----~~~~~~ 152 (355)
T cd03799 80 IDHIHAHFGTTPATVAMLASRLG---GIPYSFTAHGKDIFRSPDAIDLDEKLARADFVVAISEYNRQQLI----RLLGCD 152 (355)
T ss_pred CCEEEECCCCchHHHHHHHHHhc---CCCEEEEEecccccccCchHHHHHHHhhCCEEEECCHHHHHHHH----HhcCCC
Confidence 99999997644433333332221 357888888653322222 344455667777776666655544 345677
Q ss_pred CCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHHHHHHHHHHHHHHHHhccCCCc
Q 011954 229 MPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPS 308 (474)
Q Consensus 229 ~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~~ 308 (474)
..++.++|||+|.+.+.+.. .....+++.|+++|++.+.||++.+++++.++.+ +.++
T Consensus 153 ~~~~~vi~~~~d~~~~~~~~---------------~~~~~~~~~i~~~g~~~~~k~~~~l~~~~~~l~~-------~~~~ 210 (355)
T cd03799 153 PDKIHVVHCGVDLERFPPRP---------------PPPPGEPLRILSVGRLVEKKGLDYLLEALALLKD-------RGID 210 (355)
T ss_pred cccEEEEeCCcCHHHcCCcc---------------ccccCCCeEEEEEeeeccccCHHHHHHHHHHHhh-------cCCC
Confidence 88999999999988876542 0123567889999999999999999999998865 3479
Q ss_pred EEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCC--CChHHHHhcCCEEEEcCCCCC------CCCchHHHHHHh
Q 011954 309 MHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKT--LTVSPYLASIDVLVQNSQARG------ECFGRITIEAMA 380 (474)
Q Consensus 309 ~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~--~~~~~~~~~adv~v~ps~~~~------E~~~~~~~EAma 380 (474)
++|+++|.++ ....+++.++++++.++|++.|+. +++..+|+.||++++||. . |++|++++|||+
T Consensus 211 ~~l~i~G~~~-----~~~~~~~~~~~~~~~~~v~~~g~~~~~~l~~~~~~adi~l~~s~--~~~~~~~e~~~~~~~Ea~a 283 (355)
T cd03799 211 FRLDIVGDGP-----LRDELEALIAELGLEDRVTLLGAKSQEEVRELLRAADLFVLPSV--TAADGDREGLPVVLMEAMA 283 (355)
T ss_pred eEEEEEECCc-----cHHHHHHHHHHcCCCCeEEECCcCChHHHHHHHHhCCEEEecce--ecCCCCccCccHHHHHHHH
Confidence 9999999986 677889999999999999999986 789999999999999998 6 999999999999
Q ss_pred cCCCEEEcCCCCcceeeeeCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHH
Q 011954 381 FQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRFLEHHMSQR 453 (474)
Q Consensus 381 ~G~PvI~s~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~fs~~~~~~~ 453 (474)
+|+|||+++.|+.+|++.++.+|++++++| +++++++|.+++++++.+.+|++++++.+.++|||+.++++
T Consensus 284 ~G~Pvi~~~~~~~~~~i~~~~~g~~~~~~~--~~~l~~~i~~~~~~~~~~~~~~~~a~~~~~~~~s~~~~~~~ 354 (355)
T cd03799 284 MGLPVISTDVSGIPELVEDGETGLLVPPGD--PEALADAIERLLDDPELRREMGEAGRARVEEEFDIRKQAAR 354 (355)
T ss_pred cCCCEEecCCCCcchhhhCCCceEEeCCCC--HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCHHHHhhc
Confidence 999999999999999999988999999988 99999999999999999999999999999999999999875
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. |
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-38 Score=303.81 Aligned_cols=340 Identities=24% Similarity=0.222 Sum_probs=247.6
Q ss_pred EEEEEecCCCC--CChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhcccchhc-cceee----eehhcHH-HHhh
Q 011954 76 LVLLVSHELSL--SGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEHKMLD-RGVQV----LSAKGEK-AINT 147 (474)
Q Consensus 76 kIl~v~~~~~~--gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~-~~~~ 147 (474)
|||++++.++| ||+++++.+++++|.++||+|++++.................... ..... ....... ....
T Consensus 1 kil~i~~~~~p~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (357)
T cd03795 1 RVLHVGKFYPPDRGGIEQVIRDLAEGLAARGIEVAVLCASPEPKGRDEERNGHRVIRAPSLLNVASTPFSPSFFKQLKKL 80 (357)
T ss_pred CeeEecCCCCCCCCcHHHHHHHHHHHHHhCCCceEEEecCCCCcchhhhccCceEEEeecccccccccccHHHHHHHHhc
Confidence 69999988776 888999999999999999999999965443222111100000000 00000 0000111 1134
Q ss_pred hcCCCEEEEcccchhhHHhHHhhhcccccccceeeeeecccccc------chhhhhhcccccccccccccccHHHHHHhH
Q 011954 148 ALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHY------FKLEYVKHLPFVAGAMIDSYTTAEYWKNRT 221 (474)
Q Consensus 148 ~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~------~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 221 (474)
..++|+||+|++............ ...+.+.++|+..... +.......+..++.+++.+....+.+.
T Consensus 81 ~~~~Dii~~~~~~~~~~~~~~~~~----~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~s~~~~~~~~--- 153 (357)
T cd03795 81 AKKADVIHLHFPNPLADLALLLLP----RKKPVVVHWHSDIVKQKLLLKLYRPLQRRFLRRADAIVATSPNYAETSP--- 153 (357)
T ss_pred CCCCCEEEEecCcchHHHHHHHhc----cCceEEEEEcChhhccchhhhhhhHHHHHHHHhcCEEEeCcHHHHHHHH---
Confidence 678999999987654333322221 2357778888532111 111122234455556555555444332
Q ss_pred HHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHHHHHHHHHHHHHHHH
Q 011954 222 RERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIRE 301 (474)
Q Consensus 222 ~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~ 301 (474)
..... ..++.+||||+|.+.+.+.... .. .....+.+.++++++||+.+.||++.+++|+.++
T Consensus 154 -~~~~~-~~~~~~i~~gi~~~~~~~~~~~------~~---~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l------ 216 (357)
T cd03795 154 -VLRRF-RDKVRVIPLGLDPARYPRPDAL------EE---AIWRRAAGRPFFLFVGRLVYYKGLDVLLEAAAAL------ 216 (357)
T ss_pred -HhcCC-ccceEEecCCCChhhcCCcchh------hh---HhhcCCCCCcEEEEecccccccCHHHHHHHHHhc------
Confidence 22333 3789999999999887654321 00 2233446778999999999999999999999876
Q ss_pred hccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCC--CChHHHHhcCCEEEEcCCCCCCCCchHHHHHH
Q 011954 302 KKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKT--LTVSPYLASIDVLVQNSQARGECFGRITIEAM 379 (474)
Q Consensus 302 ~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~--~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAm 379 (474)
.+++|+|+|+|+ ....+++.+++++..++|+|+|++ +++..+|+.||++++||.+..|++|++++|||
T Consensus 217 -----~~~~l~i~G~g~-----~~~~~~~~~~~~~~~~~V~~~g~v~~~~~~~~~~~ad~~i~ps~~~~e~~g~~~~Ea~ 286 (357)
T cd03795 217 -----PDAPLVIVGEGP-----LEAELEALAAALGLLDRVRFLGRLDDEEKAALLAACDVFVFPSVERSEAFGIVLLEAM 286 (357)
T ss_pred -----cCcEEEEEeCCh-----hHHHHHHHHHhcCCcceEEEcCCCCHHHHHHHHHhCCEEEeCCcccccccchHHHHHH
Confidence 379999999986 678889999899999999999986 56899999999999999744699999999999
Q ss_pred hcCCCEEEcCCCCcceeeee-CCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHH
Q 011954 380 AFQLPVLGTAAGGTMEIVVN-GTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRFLEHHMS 451 (474)
Q Consensus 380 a~G~PvI~s~~~g~~e~v~~-~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~fs~~~~~ 451 (474)
++|+|||+++.++..+.+.+ +.+|++++++| +++++++|.++++|++.+++|++++++.+.++|||+.++
T Consensus 287 ~~g~Pvi~~~~~~~~~~i~~~~~~g~~~~~~d--~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 357 (357)
T cd03795 287 AFGKPVISTEIGTGGSYVNLHGVTGLVVPPGD--PAALAEAIRRLLEDPELRERLGEAARERAEEEFTADRMV 357 (357)
T ss_pred HcCCCEEecCCCCchhHHhhCCCceEEeCCCC--HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHhcchHhhC
Confidence 99999999999999998876 89999999998 999999999999999999999999999999999999874
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PLN02846 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-38 Score=300.91 Aligned_cols=337 Identities=14% Similarity=0.101 Sum_probs=234.2
Q ss_pred ccCEEEEEecCCCC--CChhHHHHHHHHHHHhcC-cEEEEEeCCCCCCch----------------h--hhhhcccc-hh
Q 011954 73 KSKLVLLVSHELSL--SGGPLLLMELAFLLRGVG-AEVVWITNQKPNEPD----------------E--VIYSLEHK-ML 130 (474)
Q Consensus 73 ~~~kIl~v~~~~~~--gG~~~~~~~l~~~L~~~G-~~V~v~~~~~~~~~~----------------~--~~~~~~~~-~~ 130 (474)
++|||++++..+.| +|.......++.+|+++| |+|+++.+..+.... + ...+.... ..
T Consensus 3 ~~mrIaivTdt~lP~vnGva~s~~~~a~~L~~~G~heV~vvaP~~~~~~~~~~~~~~~~f~~~~~~e~~~~~~~~~~v~r 82 (462)
T PLN02846 3 KKQHIAIFTTASLPWMTGTAVNPLFRAAYLAKDGDREVTLVIPWLSLKDQKLVYPNKITFSSPSEQEAYVRQWLEERISF 82 (462)
T ss_pred CCCEEEEEEcCCCCCCCCeeccHHHHHHHHHhcCCcEEEEEecCCccccccccccccccccCchhhhhhhhhhccCeEEE
Confidence 46999999998777 888888999999999999 799999976542110 0 00000000 00
Q ss_pred ccceee--------------eehhcHHHHhhhcCCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccccchh--
Q 011954 131 DRGVQV--------------LSAKGEKAINTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYFKL-- 194 (474)
Q Consensus 131 ~~~~~~--------------~~~~~~~~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~-- 194 (474)
-.++.+ .+...+...+...+||+||++++....|......... +. ..++.+.|....+|...
T Consensus 83 ~~s~~~p~yp~r~~~~~r~~~~~~~i~~~l~~~~pDVIHv~tP~~LG~~~~g~~~~~-k~-~~vV~tyHT~y~~Y~~~~~ 160 (462)
T PLN02846 83 LPKFSIKFYPGKFSTDKRSILPVGDISETIPDEEADIAVLEEPEHLTWYHHGKRWKT-KF-RLVIGIVHTNYLEYVKREK 160 (462)
T ss_pred ecccccccCcccccccccccCChHHHHHHHHhcCCCEEEEcCchhhhhHHHHHHHHh-cC-CcEEEEECCChHHHHHHhc
Confidence 011111 1123355666779999999999988777522222111 12 23777888744333211
Q ss_pred -----h-hh----hcc--cccccccccccccHHHHHHhHHHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHH
Q 011954 195 -----E-YV----KHL--PFVAGAMIDSYTTAEYWKNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRE 262 (474)
Q Consensus 195 -----~-~~----~~~--~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~ 262 (474)
. .. .++ ..++.+++.|..+.+ +. ..+.+..+|||.+.|.+.... .++
T Consensus 161 ~g~~~~~l~~~~~~~~~r~~~d~vi~pS~~~~~-l~-----------~~~i~~v~GVd~~~f~~~~~~---------~~~ 219 (462)
T PLN02846 161 NGRVKAFLLKYINSWVVDIYCHKVIRLSAATQD-YP-----------RSIICNVHGVNPKFLEIGKLK---------LEQ 219 (462)
T ss_pred cchHHHHHHHHHHHHHHHHhcCEEEccCHHHHH-Hh-----------hCEEecCceechhhcCCCccc---------Hhh
Confidence 0 11 111 123444455543322 11 124445689999988765321 222
Q ss_pred hcCCCCC--CEEEEEecccccCcchHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCe
Q 011954 263 SLGVRDD--DLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDH 340 (474)
Q Consensus 263 ~~~~~~~--~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~ 340 (474)
... +.+ ..+++|+||+.+.||++.+++|++++.+ ..++++|+|+|+|| .+++++++++++++...
T Consensus 220 ~~~-~~~~~~~~~l~vGRL~~eK~~~~Li~a~~~l~~-------~~~~~~l~ivGdGp-----~~~~L~~~a~~l~l~~~ 286 (462)
T PLN02846 220 QKN-GEQAFTKGAYYIGKMVWSKGYKELLKLLHKHQK-------ELSGLEVDLYGSGE-----DSDEVKAAAEKLELDVR 286 (462)
T ss_pred hcC-CCCCcceEEEEEecCcccCCHHHHHHHHHHHHh-------hCCCeEEEEECCCc-----cHHHHHHHHHhcCCcEE
Confidence 222 233 2468899999999999999999998865 34789999999997 78899999999998644
Q ss_pred EEEecCCCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCcceeeeeCCceeeecCCCCChHHHHHHH
Q 011954 341 VHFVNKTLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNI 420 (474)
Q Consensus 341 v~~~g~~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i 420 (474)
+ |.|. .+..++|..+|+||+||. .|+||++++||||||+|||+++.++ .|++.++.+|++++ | .++++++|
T Consensus 287 v-f~G~-~~~~~~~~~~DvFv~pS~--~Et~g~v~lEAmA~G~PVVa~~~~~-~~~v~~~~ng~~~~--~--~~~~a~ai 357 (462)
T PLN02846 287 V-YPGR-DHADPLFHDYKVFLNPST--TDVVCTTTAEALAMGKIVVCANHPS-NEFFKQFPNCRTYD--D--GKGFVRAT 357 (462)
T ss_pred E-ECCC-CCHHHHHHhCCEEEECCC--cccchHHHHHHHHcCCcEEEecCCC-cceeecCCceEecC--C--HHHHHHHH
Confidence 4 7775 456689999999999999 8999999999999999999999998 59999999999984 4 89999999
Q ss_pred HHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 011954 421 VKLATHVERRLTMGKKGYERVKDRFLEHHMSQRIALVLRE 460 (474)
Q Consensus 421 ~~ll~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~ 460 (474)
..++.++. ..++.+++ +.|||+..+++++++|+-
T Consensus 358 ~~~l~~~~--~~~~~~a~----~~~SWe~~~~~l~~~~~~ 391 (462)
T PLN02846 358 LKALAEEP--APLTDAQR----HELSWEAATERFLRVADL 391 (462)
T ss_pred HHHHccCc--hhHHHHHH----HhCCHHHHHHHHHHHhcc
Confidence 99998532 33333333 479999999999999974
|
|
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-37 Score=302.20 Aligned_cols=349 Identities=20% Similarity=0.180 Sum_probs=249.1
Q ss_pred EEEEEecCCC--CCChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhc-----ccch----h-ccceeeeehhcHH
Q 011954 76 LVLLVSHELS--LSGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSL-----EHKM----L-DRGVQVLSAKGEK 143 (474)
Q Consensus 76 kIl~v~~~~~--~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~-----~~~~----~-~~~~~~~~~~~~~ 143 (474)
||+++++.++ .||+++++.+++++|.+.||+|++++.............. .... . .....+.......
T Consensus 1 kIl~i~~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (375)
T cd03821 1 KILHVIPSFDPKYGGPVRVVLNLSKALAKLGHEVTVATTDAGGDPLLVALNGVPVKLFSINVAYGLNLARYLFPPSLLAW 80 (375)
T ss_pred CeEEEcCCCCcccCCeehHHHHHHHHHHhcCCcEEEEecCCCCccchhhccCceeeecccchhhhhhhhhhccChhHHHH
Confidence 6999999874 4888999999999999999999999965543222111000 0000 0 0000000011122
Q ss_pred HHhhhcCCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccccc--hhhhh----------hccccccccccccc
Q 011954 144 AINTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYF--KLEYV----------KHLPFVAGAMIDSY 211 (474)
Q Consensus 144 ~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~--~~~~~----------~~~~~~~~~~~~s~ 211 (474)
......++|+||+|+............ ......+++++.|+....+. ...+. ..+...+.++..+.
T Consensus 81 ~~~~~~~~dii~~~~~~~~~~~~~~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 158 (375)
T cd03821 81 LRLNIREADIVHVHGLWSYPSLAAARA--ARKYGIPYVVSPHGMLDPWALPHKALKKRLAWFLFERRLLQAAAAVHATSE 158 (375)
T ss_pred HHHhCCCCCEEEEecccchHHHHHHHH--HHHhCCCEEEEccccccccccccchhhhHHHHHHHHHHHHhcCCEEEECCH
Confidence 223347899999997543222111111 11134578888887643332 10111 11122233333331
Q ss_pred ccHHHHHHhHHHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHHHHHH
Q 011954 212 TTAEYWKNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHS 291 (474)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a 291 (474)
. ..... .......++.++|||+|.+.+.+.... .. ++.++.+.++++++++||+.+.||++.++++
T Consensus 159 ~----~~~~~--~~~~~~~~~~vi~~~~~~~~~~~~~~~-------~~-~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a 224 (375)
T cd03821 159 Q----EAAEI--RRLGLKAPIAVIPNGVDIPPFAALPSR-------GR-RRKFPILPDKRIILFLGRLHPKKGLDLLIEA 224 (375)
T ss_pred H----HHHHH--HhhCCcccEEEcCCCcChhccCcchhh-------hh-hhhccCCCCCcEEEEEeCcchhcCHHHHHHH
Confidence 1 12111 123456789999999999888654321 11 6677777888999999999999999999999
Q ss_pred HHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCCC--ChHHHHhcCCEEEEcCCCCCC
Q 011954 292 FYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTL--TVSPYLASIDVLVQNSQARGE 369 (474)
Q Consensus 292 ~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~--~~~~~~~~adv~v~ps~~~~E 369 (474)
+.++.+ ++++++|+++|.++. .+...++.+++++++.++|+|+|+++ ++..+|+.||++|+||. .|
T Consensus 225 ~~~l~~-------~~~~~~l~i~G~~~~---~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv~v~ps~--~e 292 (375)
T cd03821 225 FAKLAE-------RFPDWHLVIAGPDEG---GYRAELKQIAAALGLEDRVTFTGMLYGEDKAAALADADLFVLPSH--SE 292 (375)
T ss_pred HHHhhh-------hcCCeEEEEECCCCc---chHHHHHHHHHhcCccceEEEcCCCChHHHHHHHhhCCEEEeccc--cC
Confidence 998876 448999999998642 24556666678899999999999874 89999999999999999 79
Q ss_pred CCchHHHHHHhcCCCEEEcCCCCcceeeeeCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHH
Q 011954 370 CFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRFLEHH 449 (474)
Q Consensus 370 ~~~~~~~EAma~G~PvI~s~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~fs~~~ 449 (474)
+||++++|||+||+|||+++.+|..|++.+ .+|++++.+ .++++++|.+++++++.++++++++++.+.++|+|+.
T Consensus 293 ~~~~~~~Eama~G~PvI~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~ 368 (375)
T cd03821 293 NFGIVVAEALACGTPVVTTDKVPWQELIEY-GCGWVVDDD---VDALAAALRRALELPQRLKAMGENGRALVEERFSWTA 368 (375)
T ss_pred CCCcHHHHHHhcCCCEEEcCCCCHHHHhhc-CceEEeCCC---hHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCHHH
Confidence 999999999999999999999999999987 789888764 6999999999999999999999999999999999999
Q ss_pred HHHHHHH
Q 011954 450 MSQRIAL 456 (474)
Q Consensus 450 ~~~~~~~ 456 (474)
+++++++
T Consensus 369 ~~~~~~~ 375 (375)
T cd03821 369 IAQQLLE 375 (375)
T ss_pred HHHHhhC
Confidence 9998863
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. |
| >KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-39 Score=283.11 Aligned_cols=341 Identities=19% Similarity=0.187 Sum_probs=262.0
Q ss_pred EEEEEecCCCC--CChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhcccchhccceeeee---------------
Q 011954 76 LVLLVSHELSL--SGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEHKMLDRGVQVLS--------------- 138 (474)
Q Consensus 76 kIl~v~~~~~~--gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 138 (474)
+|+++++.+.| ||.|.++..|++.|.+.||.|.++|..++.... -.....+..++.
T Consensus 2 ~i~mVsdff~P~~ggveshiy~lSq~li~lghkVvvithayg~r~g-------irylt~glkVyylp~~v~~n~tT~ptv 74 (426)
T KOG1111|consen 2 RILMVSDFFYPSTGGVESHIYALSQCLIRLGHKVVVITHAYGNRVG-------IRYLTNGLKVYYLPAVVGYNQTTFPTV 74 (426)
T ss_pred cceeeCcccccCCCChhhhHHHhhcchhhcCCeEEEEeccccCccc-------eeeecCCceEEEEeeeeeecccchhhh
Confidence 58999998665 999999999999999999999999966554211 111111222211
Q ss_pred ---hhcHHHHhhhcCCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccccch------hhhhhccccccccccc
Q 011954 139 ---AKGEKAINTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYFK------LEYVKHLPFVAGAMID 209 (474)
Q Consensus 139 ---~~~~~~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~------~~~~~~~~~~~~~~~~ 209 (474)
.+.++.+...++..+||.|++++...-..+..... .+-+++++-|...+.... ....-.+...++.+++
T Consensus 75 ~~~~Pllr~i~lrE~I~ivhghs~fS~lahe~l~hart--MGlktVfTdHSlfGfad~~si~~n~ll~~sL~~id~~IcV 152 (426)
T KOG1111|consen 75 FSDFPLLRPILLRERIEIVHGHSPFSYLAHEALMHART--MGLKTVFTDHSLFGFADIGSILTNKLLPLSLANIDRIICV 152 (426)
T ss_pred hccCcccchhhhhhceEEEecCChHHHHHHHHHHHHHh--cCceEEEeccccccccchhhhhhcceeeeeecCCCcEEEE
Confidence 23455666678999999999887765554444333 345889999986543221 1222334566777777
Q ss_pred ccccHHHHHHhHHHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCC-EEEEEecccccCcchHHH
Q 011954 210 SYTTAEYWKNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDD-LLFAIINSVSRGKGQDLF 288 (474)
Q Consensus 210 s~~~~~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~i~~vgrl~~~Kg~~~l 288 (474)
|.+.++- ..-+-.+++.++.+|||.++.+.|.|.+.. .++.+ ..++.++|+.++||+|++
T Consensus 153 shtsken----tvlr~~L~p~kvsvIPnAv~~~~f~P~~~~---------------~~S~~i~~ivv~sRLvyrKGiDll 213 (426)
T KOG1111|consen 153 SHTSKEN----TVLRGALAPAKVSVIPNAVVTHTFTPDAAD---------------KPSADIITIVVASRLVYRKGIDLL 213 (426)
T ss_pred eecCCCc----eEEEeccCHhHeeeccceeeccccccCccc---------------cCCCCeeEEEEEeeeeeccchHHH
Confidence 7776543 233345788999999999999999986432 12333 788899999999999999
Q ss_pred HHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCC--CChHHHHhcCCEEEEcCCC
Q 011954 289 LHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKT--LTVSPYLASIDVLVQNSQA 366 (474)
Q Consensus 289 l~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~--~~~~~~~~~adv~v~ps~~ 366 (474)
++++.++.+ ++|+++|+|+|+|| .+..+++..+++.++++|.++|.. +++.+.|...|+|++||.
T Consensus 214 ~~iIp~vc~-------~~p~vrfii~GDGP-----k~i~lee~lEk~~l~~rV~~lG~v~h~~Vr~vl~~G~IFlntSl- 280 (426)
T KOG1111|consen 214 LEIIPSVCD-------KHPEVRFIIIGDGP-----KRIDLEEMLEKLFLQDRVVMLGTVPHDRVRDVLVRGDIFLNTSL- 280 (426)
T ss_pred HHHHHHHHh-------cCCCeeEEEecCCc-----ccchHHHHHHHhhccCceEEecccchHHHHHHHhcCcEEeccHH-
Confidence 999999987 77999999999998 788899999999999999999964 889999999999999999
Q ss_pred CCCCCchHHHHHHhcCCCEEEcCCCCcceeeeeCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcC
Q 011954 367 RGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRFL 446 (474)
Q Consensus 367 ~~E~~~~~~~EAma~G~PvI~s~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~fs 446 (474)
.|.|+++++|||+||+|||+|++||++|++.++ .-++.+++ ++++++++++.+..-. ..-+...+++.+.|+
T Consensus 281 -TEafc~~ivEAaScGL~VVsTrVGGIpeVLP~d-~i~~~~~~---~~dl~~~v~~ai~~~~---~~p~~~h~~v~~~y~ 352 (426)
T KOG1111|consen 281 -TEAFCMVIVEAASCGLPVVSTRVGGIPEVLPED-MITLGEPG---PDDLVGAVEKAITKLR---TLPLEFHDRVKKMYS 352 (426)
T ss_pred -HHHHHHHHHHHHhCCCEEEEeecCCccccCCcc-ceeccCCC---hHHHHHHHHHHHHHhc---cCchhHHHHHHHhcc
Confidence 999999999999999999999999999999554 23333443 7889988888876321 113445667888899
Q ss_pred HHHHHHHHHHHHHHHHhhh
Q 011954 447 EHHMSQRIALVLREVLQYA 465 (474)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~ 465 (474)
|+.++++.+++|.++...+
T Consensus 353 w~dVa~rTekvy~r~~~t~ 371 (426)
T KOG1111|consen 353 WKDVAERTEKVYDRAATTS 371 (426)
T ss_pred HHHHHHHHHHHHHHHhhcc
Confidence 9999999999999998754
|
|
| >PLN00142 sucrose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-37 Score=313.35 Aligned_cols=219 Identities=18% Similarity=0.257 Sum_probs=176.7
Q ss_pred CCCeEEEeCCCCccccchhhhhHHHH-----------HhHHHHHHhcCC--CCCCEEEEEecccccCcchHHHHHHHHHH
Q 011954 229 MPETYVVHLGNSKDLMDIAEDSVARR-----------VLREHVRESLGV--RDDDLLFAIINSVSRGKGQDLFLHSFYES 295 (474)
Q Consensus 229 ~~ki~vi~ngvd~~~~~~~~~~~~~~-----------~~~~~~r~~~~~--~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l 295 (474)
.+++.||++|+|...|.|......+. ......++.+|+ +.++++|+++||+.+.||++.+++|++++
T Consensus 519 ~~ki~VVppGvD~~~F~P~~~~~~rl~~l~n~I~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l 598 (815)
T PLN00142 519 DPKFNIVSPGADMSIYFPYTEKQKRLTSLHPSIEELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKN 598 (815)
T ss_pred ccCeeEECCCCChhhcCCCChHHhhHHhhcccchhhcCChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHH
Confidence 56899999999999887543211000 001123445665 44567899999999999999999999887
Q ss_pred HHHHHHhccCCCcEEEEEEcCCCC-c---Cch---HHHHHHHHHHHcCCCCeEEEecCC------CChHHHHh-cCCEEE
Q 011954 296 LQLIREKKLQVPSMHAVVVGSDMN-A---QTK---FETELRNFVAEKKIQDHVHFVNKT------LTVSPYLA-SIDVLV 361 (474)
Q Consensus 296 ~~~~~~~~~~~~~~~l~i~G~g~~-~---~~~---~~~~l~~~~~~~~l~~~v~~~g~~------~~~~~~~~-~adv~v 361 (474)
.+ ..++++|+|+|++.+ . ..+ ...++.++++++++.++|.|+|.+ +++..+++ .+|+||
T Consensus 599 ~~-------l~~~~~LVIVGgg~d~~~s~d~ee~~el~~L~~La~~lgL~~~V~flG~~~~~~~~~eLyr~iadaaDVfV 671 (815)
T PLN00142 599 KR-------LRELVNLVVVGGFIDPSKSKDREEIAEIKKMHSLIEKYNLKGQFRWIAAQTNRVRNGELYRYIADTKGAFV 671 (815)
T ss_pred HH-------hCCCcEEEEEECCccccccccHHHHHHHHHHHHHHHHcCCCCcEEEcCCcCCcccHHHHHHHHHhhCCEEE
Confidence 54 236799999998731 1 111 124678889999999999999963 23455555 579999
Q ss_pred EcCCCCCCCCchHHHHHHhcCCCEEEcCCCCcceeeeeCCceeeecCCCCChHHHHHHHHHH----hhCHHHHHHHHHHH
Q 011954 362 QNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKL----ATHVERRLTMGKKG 437 (474)
Q Consensus 362 ~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~l----l~~~~~~~~~~~~~ 437 (474)
+||. +|+||++++||||||+|||+|++||+.|+|.++.+|++++++| +++++++|.++ +.|++.+++|+++|
T Consensus 672 lPS~--~EgFGLvvLEAMA~GlPVVATdvGG~~EIV~dG~tG~LV~P~D--~eaLA~aI~~lLekLl~Dp~lr~~mg~~A 747 (815)
T PLN00142 672 QPAL--YEAFGLTVVEAMTCGLPTFATCQGGPAEIIVDGVSGFHIDPYH--GDEAANKIADFFEKCKEDPSYWNKISDAG 747 (815)
T ss_pred eCCc--ccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEeCCCC--HHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 9999 9999999999999999999999999999999999999999999 99999998765 46999999999999
Q ss_pred HHHHHHhcCHHHHHHHHHHHH
Q 011954 438 YERVKDRFLEHHMSQRIALVL 458 (474)
Q Consensus 438 ~~~~~~~fs~~~~~~~~~~~~ 458 (474)
++++.++|||+.++++++++.
T Consensus 748 r~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 748 LQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred HHHHHHhCCHHHHHHHHHHHH
Confidence 999999999999999998865
|
|
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-37 Score=296.30 Aligned_cols=329 Identities=22% Similarity=0.235 Sum_probs=250.7
Q ss_pred EEEEEecCCC-CCChhHHHHHHHHHHHhcCcEEEEEeCCCCC-Cchhhhhhcccchhccce----------eeeehhcHH
Q 011954 76 LVLLVSHELS-LSGGPLLLMELAFLLRGVGAEVVWITNQKPN-EPDEVIYSLEHKMLDRGV----------QVLSAKGEK 143 (474)
Q Consensus 76 kIl~v~~~~~-~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~-~~~~~~~~~~~~~~~~~~----------~~~~~~~~~ 143 (474)
||+++++.+. .||+++.+.+++++|.+.||+|++++..... .... .......... .........
T Consensus 1 kI~i~~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (348)
T cd03820 1 KILFVIPSLGNAGGAERVLSNLANALAEKGHEVTIISLDKGEPPFYE----LDPKIKVIDLGDKRDSKLLARFKKLRRLR 76 (348)
T ss_pred CeEEEeccccCCCChHHHHHHHHHHHHhCCCeEEEEecCCCCCCccc----cCCccceeecccccccchhccccchHHHH
Confidence 5899999887 6888999999999999999999999965543 1111 1111111111 112223445
Q ss_pred HHhhhcCCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccccchhh-----hhhcccccccccccccccHHHHH
Q 011954 144 AINTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYFKLE-----YVKHLPFVAGAMIDSYTTAEYWK 218 (474)
Q Consensus 144 ~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~-----~~~~~~~~~~~~~~s~~~~~~~~ 218 (474)
.+.+..+||+||++......++..... . ..+++.+.|.......... ....++.++.+++.+....
T Consensus 77 ~~l~~~~~d~i~~~~~~~~~~~~~~~~-~----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~---- 147 (348)
T cd03820 77 KLLKNNKPDVVISFLTSLLTFLASLGL-K----IVKLIVSEHNSPDAYKKRLRRLLLRRLLYRRADAVVVLTEEDR---- 147 (348)
T ss_pred HhhcccCCCEEEEcCchHHHHHHHHhh-c----cccEEEecCCCccchhhhhHHHHHHHHHHhcCCEEEEeCHHHH----
Confidence 566668999999998662222222111 1 1477888887643332221 2233556666666666554
Q ss_pred HhHHHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHHHHHHHHHHHHH
Q 011954 219 NRTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQL 298 (474)
Q Consensus 219 ~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~ 298 (474)
.........++.++|||++.+.+... .+.++..++++|++.+.||++.+++++.++.+
T Consensus 148 ---~~~~~~~~~~~~vi~~~~~~~~~~~~------------------~~~~~~~i~~~g~~~~~K~~~~l~~~~~~l~~- 205 (348)
T cd03820 148 ---ALYYKKFNKNVVVIPNPLPFPPEEPS------------------SDLKSKRILAVGRLVPQKGFDLLIEAWAKIAK- 205 (348)
T ss_pred ---HHhhccCCCCeEEecCCcChhhcccc------------------CCCCCcEEEEEEeeccccCHHHHHHHHHHHHh-
Confidence 11234566889999999998865432 12567889999999999999999999998865
Q ss_pred HHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCCCChHHHHhcCCEEEEcCCCCCCCCchHHHHH
Q 011954 299 IREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYLASIDVLVQNSQARGECFGRITIEA 378 (474)
Q Consensus 299 ~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EA 378 (474)
..++++|+|+|+++ ....++++++++++.++|.+.|+.+++..+|+.||++++||. .|++|++++||
T Consensus 206 ------~~~~~~l~i~G~~~-----~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~~i~ps~--~e~~~~~~~Ea 272 (348)
T cd03820 206 ------KHPDWKLRIVGDGP-----EREALEALIKELGLEDRVILLGFTKNIEEYYAKASIFVLTSR--FEGFPMVLLEA 272 (348)
T ss_pred ------cCCCeEEEEEeCCC-----CHHHHHHHHHHcCCCCeEEEcCCcchHHHHHHhCCEEEeCcc--ccccCHHHHHH
Confidence 45899999999986 677888889999999999999999999999999999999999 89999999999
Q ss_pred HhcCCCEEEcCCC-CcceeeeeCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 011954 379 MAFQLPVLGTAAG-GTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRFLEHHMSQRIA 455 (474)
Q Consensus 379 ma~G~PvI~s~~~-g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~ 455 (474)
|+||+|||+++.+ +..+++.++.+|+++++.| +++++++|.++++|++.+++|++++++.+ ++|+|++++++|.
T Consensus 273 ~a~G~Pvi~~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~i~~ll~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 347 (348)
T cd03820 273 MAFGLPVISFDCPTGPSEIIEDGVNGLLVPNGD--VEALAEALLRLMEDEELRKRMGANARESA-ERFSIENIIKQWE 347 (348)
T ss_pred HHcCCCEEEecCCCchHhhhccCcceEEeCCCC--HHHHHHHHHHHHcCHHHHHHHHHHHHHHH-HHhCHHHHHHHhc
Confidence 9999999999976 4577777777999999988 99999999999999999999999997655 5699999999885
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. |
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-37 Score=299.45 Aligned_cols=342 Identities=20% Similarity=0.221 Sum_probs=248.5
Q ss_pred EEEEEecCCCC--CChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhh--hc--c--cchhccceeeeehhcHHHHhh
Q 011954 76 LVLLVSHELSL--SGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIY--SL--E--HKMLDRGVQVLSAKGEKAINT 147 (474)
Q Consensus 76 kIl~v~~~~~~--gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~--~~--~--~~~~~~~~~~~~~~~~~~~~~ 147 (474)
||+++++.+++ ||++..+.+|+++|.+.||+|.+++............ .+ . .........+..........+
T Consensus 1 kIl~i~~~~~p~~~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (364)
T cd03814 1 RIAIVTDTFLPQVNGVVRTLQRLVEHLRARGHEVLVIAPGPFRESEGPARVVPVPSVPLPGYPEIRLALPPRRRVRRLLD 80 (364)
T ss_pred CeEEEecccCccccceehHHHHHHHHHHHCCCEEEEEeCCchhhccCCCCceeecccccCcccceEecccchhhHHHHHH
Confidence 58999987665 7778999999999999999999999654321110000 00 0 000001111112223444556
Q ss_pred hcCCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccccch------------hhhhhcccccccccccccccHH
Q 011954 148 ALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYFK------------LEYVKHLPFVAGAMIDSYTTAE 215 (474)
Q Consensus 148 ~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~------------~~~~~~~~~~~~~~~~s~~~~~ 215 (474)
..+||+||+++.....+....... ....|++.++|+....+.. ......++.++.+++.+....+
T Consensus 81 ~~~pdii~~~~~~~~~~~~~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~ 157 (364)
T cd03814 81 AFAPDVVHIATPGPLGLAALRAAR---RLGIPVVTSYHTDFPEYLRYYGLGPLSWLAWAYLRWFHNRADRVLVPSPSLAD 157 (364)
T ss_pred hcCCCEEEEeccchhhHHHHHHHH---HcCCCEEEEEecChHHHhhhcccchHhHhhHHHHHHHHHhCCEEEeCCHHHHH
Confidence 789999999875443332222222 1235788888865332211 0111222444555555555444
Q ss_pred HHHHhHHHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHHHHHHHHHH
Q 011954 216 YWKNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYES 295 (474)
Q Consensus 216 ~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l 295 (474)
.+. .....++.+++||+|.+.+.+.... ...++.++ +.+.++++++|++...||++.+++++.++
T Consensus 158 ~~~-------~~~~~~~~~~~~g~~~~~~~~~~~~-------~~~~~~~~-~~~~~~i~~~G~~~~~k~~~~~i~~~~~l 222 (364)
T cd03814 158 ELR-------ARGFRRVRLWPRGVDTELFHPRRRD-------EALRARLG-PPDRPVLLYVGRLAPEKNLEALLDADLPL 222 (364)
T ss_pred HHh-------ccCCCceeecCCCccccccCccccc-------HHHHHHhC-CCCCeEEEEEeccccccCHHHHHHHHHHh
Confidence 221 2234679999999999988654321 22344455 45678899999999999999999999988
Q ss_pred HHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecC--CCChHHHHhcCCEEEEcCCCCCCCCch
Q 011954 296 LQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNK--TLTVSPYLASIDVLVQNSQARGECFGR 373 (474)
Q Consensus 296 ~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~--~~~~~~~~~~adv~v~ps~~~~E~~~~ 373 (474)
.+ + ++++|+|+|+++ ....++ +..++|.|+|+ .+++.++|+.||++++||. .|++|+
T Consensus 223 ~~-------~-~~~~l~i~G~~~-----~~~~~~------~~~~~v~~~g~~~~~~~~~~~~~~d~~l~~s~--~e~~~~ 281 (364)
T cd03814 223 RR-------R-PPVRLVIVGDGP-----ARARLE------ARYPNVHFLGFLDGEELAAAYASADVFVFPSR--TETFGL 281 (364)
T ss_pred hh-------c-CCceEEEEeCCc-----hHHHHh------ccCCcEEEEeccCHHHHHHHHHhCCEEEECcc--cccCCc
Confidence 65 3 689999999985 444443 44578999995 5789999999999999998 899999
Q ss_pred HHHHHHhcCCCEEEcCCCCcceeeeeCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHH
Q 011954 374 ITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRFLEHHMSQR 453 (474)
Q Consensus 374 ~~~EAma~G~PvI~s~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~fs~~~~~~~ 453 (474)
+++|||+||+|||+++.++..|++.++.+|+++++.| .++++++|.++++|++.+++|++++++.+ ++|+|+.++++
T Consensus 282 ~~lEa~a~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~--~~~l~~~i~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 358 (364)
T cd03814 282 VVLEAMASGLPVVAPDAGGPADIVTDGENGLLVEPGD--AEAFAAALAALLADPELRRRMAARARAEA-ERRSWEAFLDN 358 (364)
T ss_pred HHHHHHHcCCCEEEcCCCCchhhhcCCcceEEcCCCC--HHHHHHHHHHHHcCHHHHHHHHHHHHHHH-hhcCHHHHHHH
Confidence 9999999999999999999999999889999999998 99999999999999999999999999998 66999999999
Q ss_pred HHHHHH
Q 011954 454 IALVLR 459 (474)
Q Consensus 454 ~~~~~~ 459 (474)
++++|+
T Consensus 359 ~~~~~~ 364 (364)
T cd03814 359 LLEAYR 364 (364)
T ss_pred HHHhhC
Confidence 999873
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-38 Score=311.74 Aligned_cols=276 Identities=21% Similarity=0.248 Sum_probs=223.3
Q ss_pred cCCCEEEEcccchhhHHhHHhhhcccccccceeeeeecccccc--------------chhhhh--------hcccccccc
Q 011954 149 LNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHY--------------FKLEYV--------KHLPFVAGA 206 (474)
Q Consensus 149 ~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~--------------~~~~~~--------~~~~~~~~~ 206 (474)
.++|+||+|+...+.++....+.. ...|++++.|+..... ....+. ..++.++.+
T Consensus 172 ~~~dviH~~s~~~~g~~~~~~~~~---~~~p~I~t~Hg~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ad~I 248 (475)
T cd03813 172 PKADVYHAVSTGYAGLLGALAKAR---RGTPFLLTEHGIYTRERKIELLQADWEMSYFRRLWIRFFESLGRLAYQAADRI 248 (475)
T ss_pred CCCCEEeccCcchHHHHHHHHHHH---hCCCEEEecCCccHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHhCCEE
Confidence 589999999754433333333322 3468999999753210 011111 122445555
Q ss_pred cccccccHHHHHHhHHHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchH
Q 011954 207 MIDSYTTAEYWKNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQD 286 (474)
Q Consensus 207 ~~~s~~~~~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~ 286 (474)
++.+....+. ...+|.+.+|+.|||||+|.+.|.+.... ..+.+.++|+++||+.+.||++
T Consensus 249 i~~s~~~~~~-----~~~~g~~~~ki~vIpNgid~~~f~~~~~~--------------~~~~~~~~i~~vGrl~~~Kg~~ 309 (475)
T cd03813 249 TTLYEGNRER-----QIEDGADPEKIRVIPNGIDPERFAPARRA--------------RPEKEPPVVGLIGRVVPIKDIK 309 (475)
T ss_pred EecCHHHHHH-----HHHcCCCHHHeEEeCCCcCHHHcCCcccc--------------ccCCCCcEEEEEeccccccCHH
Confidence 5555544332 23568888899999999999988654321 1235678999999999999999
Q ss_pred HHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCCCChHHHHhcCCEEEEcCCC
Q 011954 287 LFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYLASIDVLVQNSQA 366 (474)
Q Consensus 287 ~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv~v~ps~~ 366 (474)
.+++|++.+.+ +.++++|+|+|+++ .++++.++++++++++++.++|+|+| .+++.++|+.+|++|+||.
T Consensus 310 ~li~a~~~l~~-------~~p~~~l~IvG~g~-~~~~~~~e~~~li~~l~l~~~V~f~G-~~~v~~~l~~aDv~vlpS~- 379 (475)
T cd03813 310 TFIRAAAIVRK-------KIPDAEGWVIGPTD-EDPEYAEECRELVESLGLEDNVKFTG-FQNVKEYLPKLDVLVLTSI- 379 (475)
T ss_pred HHHHHHHHHHH-------hCCCeEEEEECCCC-cChHHHHHHHHHHHHhCCCCeEEEcC-CccHHHHHHhCCEEEeCch-
Confidence 99999998876 45899999999985 33357889999999999999999999 7799999999999999999
Q ss_pred CCCCCchHHHHHHhcCCCEEEcCCCCcceeeee------CCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHH
Q 011954 367 RGECFGRITIEAMAFQLPVLGTAAGGTMEIVVN------GTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYER 440 (474)
Q Consensus 367 ~~E~~~~~~~EAma~G~PvI~s~~~g~~e~v~~------~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~ 440 (474)
.||+|++++|||+||+|||+|++||++|++.+ |.+|++++++| +++++++|.++++|++.+++|+++++++
T Consensus 380 -~Eg~p~~vlEAma~G~PVVatd~g~~~elv~~~~~~~~g~~G~lv~~~d--~~~la~ai~~ll~~~~~~~~~~~~a~~~ 456 (475)
T cd03813 380 -SEGQPLVILEAMAAGIPVVATDVGSCRELIEGADDEALGPAGEVVPPAD--PEALARAILRLLKDPELRRAMGEAGRKR 456 (475)
T ss_pred -hhcCChHHHHHHHcCCCEEECCCCChHHHhcCCcccccCCceEEECCCC--HHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999988 56999999999 9999999999999999999999999999
Q ss_pred HHHhcCHHHHHHHHHHHHH
Q 011954 441 VKDRFLEHHMSQRIALVLR 459 (474)
Q Consensus 441 ~~~~fs~~~~~~~~~~~~~ 459 (474)
+.+.|+|+.++++|.++|+
T Consensus 457 v~~~~s~~~~~~~y~~lY~ 475 (475)
T cd03813 457 VERYYTLERMIDSYRRLYL 475 (475)
T ss_pred HHHhCCHHHHHHHHHHHhC
Confidence 9999999999999999984
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-37 Score=296.21 Aligned_cols=351 Identities=26% Similarity=0.281 Sum_probs=265.8
Q ss_pred EEEEEecCCCC--CChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhcccchhc---cc-----eeeeehhcHHHH
Q 011954 76 LVLLVSHELSL--SGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEHKMLD---RG-----VQVLSAKGEKAI 145 (474)
Q Consensus 76 kIl~v~~~~~~--gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~---~~-----~~~~~~~~~~~~ 145 (474)
||+++++.+++ ||+..++..++++|.+.||+|.+++.................... .. ...........+
T Consensus 1 kI~ii~~~~~~~~~G~~~~~~~l~~~L~~~g~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (374)
T cd03801 1 KILLVTPEYPPSVGGAERHVLELARALAARGHEVTVLTPGDGGLPDEEEVGGIVVVRPPPLLRVRRLLLLLLLALRLRRL 80 (374)
T ss_pred CeeEEecccCCccCcHhHHHHHHHHHHHhcCceEEEEecCCCCCCceeeecCcceecCCcccccchhHHHHHHHHHHHHH
Confidence 58999988655 677899999999999999999999966543322111100000000 00 000111223445
Q ss_pred hhhcCCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccccch-----------hhhhhcccccccccccccccH
Q 011954 146 NTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYFK-----------LEYVKHLPFVAGAMIDSYTTA 214 (474)
Q Consensus 146 ~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~-----------~~~~~~~~~~~~~~~~s~~~~ 214 (474)
....++|+||++............ .....++++++|+....... ......+...+.+++.+....
T Consensus 81 ~~~~~~Dii~~~~~~~~~~~~~~~----~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~ 156 (374)
T cd03801 81 LRRERFDVVHAHDWLALLAAALAA----RLLGIPLVLTVHGLEFGRPGNELGLLLKLARALERRALRRADRIIAVSEATR 156 (374)
T ss_pred hhhcCCcEEEEechhHHHHHHHHH----HhcCCcEEEEeccchhhccccchhHHHHHHHHHHHHHHHhCCEEEEecHHHH
Confidence 556899999999866554433111 11345888999986543321 112223345566666655555
Q ss_pred HHHHHhHHHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHHHHHHHHH
Q 011954 215 EYWKNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYE 294 (474)
Q Consensus 215 ~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~ 294 (474)
+.+ .+.++....++.++|||++...+.+.. ...+.......+.++++++|++...||++.+++++..
T Consensus 157 ~~~----~~~~~~~~~~~~~i~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~ 223 (374)
T cd03801 157 EEL----RELGGVPPEKITVIPNGVDTERFRPAP---------RAARRRLGIPEDEPVILFVGRLVPRKGVDLLLEALAK 223 (374)
T ss_pred HHH----HhcCCCCCCcEEEecCcccccccCccc---------hHHHhhcCCcCCCeEEEEecchhhhcCHHHHHHHHHH
Confidence 444 444555457899999999998876432 1223334455677899999999999999999999998
Q ss_pred HHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCC--CChHHHHhcCCEEEEcCCCCCCCCc
Q 011954 295 SLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKT--LTVSPYLASIDVLVQNSQARGECFG 372 (474)
Q Consensus 295 l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~--~~~~~~~~~adv~v~ps~~~~E~~~ 372 (474)
+.+ +.++++|+++|+++ ....+++.+++++..++|.+.|+. +++.++|+.||++++|+. .|++|
T Consensus 224 ~~~-------~~~~~~l~i~G~~~-----~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di~i~~~~--~~~~~ 289 (374)
T cd03801 224 LRK-------EYPDVRLVIVGDGP-----LREELEALAAELGLGDRVTFLGFVPDEDLPALYAAADVFVLPSL--YEGFG 289 (374)
T ss_pred Hhh-------hcCCeEEEEEeCcH-----HHHHHHHHHHHhCCCcceEEEeccChhhHHHHHHhcCEEEecch--hcccc
Confidence 865 34789999999875 788888888899999999999987 899999999999999999 79999
Q ss_pred hHHHHHHhcCCCEEEcCCCCcceeeeeCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHH
Q 011954 373 RITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRFLEHHMSQ 452 (474)
Q Consensus 373 ~~~~EAma~G~PvI~s~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~fs~~~~~~ 452 (474)
++++|||++|+|||+++.++..|++.++.+|+++++.| +++++++|.+++++++.++++++++++.+.+.|+|+.+++
T Consensus 290 ~~~~Ea~~~g~pvI~~~~~~~~~~~~~~~~g~~~~~~~--~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (374)
T cd03801 290 LVLLEAMAAGLPVVASDVGGIPEVVEDGETGLLVPPGD--PEALAEAILRLLDDPELRRRLGEAARERVAERFSWDRVAA 367 (374)
T ss_pred chHHHHHHcCCcEEEeCCCChhHHhcCCcceEEeCCCC--HHHHHHHHHHHHcChHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 99999999999999999999999999899999999998 9999999999999999999999999999999999999999
Q ss_pred HHHHHHH
Q 011954 453 RIALVLR 459 (474)
Q Consensus 453 ~~~~~~~ 459 (474)
++.++|+
T Consensus 368 ~~~~~~~ 374 (374)
T cd03801 368 RTEEVYY 374 (374)
T ss_pred HHHHhhC
Confidence 9999874
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. |
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-36 Score=293.69 Aligned_cols=347 Identities=21% Similarity=0.289 Sum_probs=256.9
Q ss_pred EEEEEecCCCC--CChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhcccc-------hhccceeeeehhcHHHHh
Q 011954 76 LVLLVSHELSL--SGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEHK-------MLDRGVQVLSAKGEKAIN 146 (474)
Q Consensus 76 kIl~v~~~~~~--gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~ 146 (474)
|||+++..++| ||++..+.+++++|.+.||+|++++................. ..................
T Consensus 1 kil~~~~~~~p~~~G~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (374)
T cd03817 1 KIGIFTDTYLPQVNGVATSIRRLAEELEKRGHEVYVVAPSYPGAPEEEEVVVVRPFRVPTFKYPDFRLPLPIPRALIIIL 80 (374)
T ss_pred CeeEeehhccCCCCCeehHHHHHHHHHHHcCCeEEEEeCCCCCCCcccccccccccccccchhhhhhccccHHHHHHHHH
Confidence 58999988765 777899999999999999999999965443222111000000 000001111112233345
Q ss_pred hhcCCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccccch---------------hhhhhccccccccccccc
Q 011954 147 TALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYFK---------------LEYVKHLPFVAGAMIDSY 211 (474)
Q Consensus 147 ~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~---------------~~~~~~~~~~~~~~~~s~ 211 (474)
...+||+||++++............ ....+++++.|.....+.. ......+..++.+++.+.
T Consensus 81 ~~~~~Div~~~~~~~~~~~~~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~ 157 (374)
T cd03817 81 KELGPDIVHTHTPFSLGLLGLRVAR---KLGIPVVATYHTMYEDYTHYVPLGRLLARAVVRRKLSRRFYNRCDAVIAPSE 157 (374)
T ss_pred hhcCCCEEEECCchhhhhHHHHHHH---HcCCCEEEEecCCHHHHHHHHhcccchhHHHHHHHHHHHHhhhCCEEEeccH
Confidence 6689999999987544332222221 2345788888865332110 011223345566666555
Q ss_pred ccHHHHHHhHHHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHHHHHH
Q 011954 212 TTAEYWKNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHS 291 (474)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a 291 (474)
...+.+. .++.. .++.++|||+|.+.+.+... ...++.++.++++++|+++|++.+.||++.++++
T Consensus 158 ~~~~~~~-----~~~~~-~~~~vi~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~~ 223 (374)
T cd03817 158 KIADLLR-----EYGVK-RPIEVIPTGIDLDRFEPVDG--------DDERRKLGIPEDEPVLLYVGRLAKEKNIDFLIRA 223 (374)
T ss_pred HHHHHHH-----hcCCC-CceEEcCCccchhccCccch--------hHHHHhcCCCCCCeEEEEEeeeecccCHHHHHHH
Confidence 5444433 33443 45999999999988766432 2235667777888999999999999999999999
Q ss_pred HHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCC--CChHHHHhcCCEEEEcCCCCCC
Q 011954 292 FYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKT--LTVSPYLASIDVLVQNSQARGE 369 (474)
Q Consensus 292 ~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~--~~~~~~~~~adv~v~ps~~~~E 369 (474)
+..+.+ +.++++|+++|+++ ..+.+++.++++++.++|.|+|+. +++..+|+.||++++||. .|
T Consensus 224 ~~~~~~-------~~~~~~l~i~G~~~-----~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~~s~--~e 289 (374)
T cd03817 224 FARLLK-------EEPDVKLVIVGDGP-----EREELEELARELGLADRVIFTGFVPREELPDYYKAADLFVFAST--TE 289 (374)
T ss_pred HHHHHH-------hCCCeEEEEEeCCc-----hHHHHHHHHHHcCCCCcEEEeccCChHHHHHHHHHcCEEEeccc--cc
Confidence 998865 34789999999986 778899999999999999999976 789999999999999998 89
Q ss_pred CCchHHHHHHhcCCCEEEcCCCCcceeeeeCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHH
Q 011954 370 CFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRFLEHH 449 (474)
Q Consensus 370 ~~~~~~~EAma~G~PvI~s~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~fs~~~ 449 (474)
++|++++|||+||+|||+++.|+..|++.++.+|+++++.+ . +++++|.+++++++.+++|++++++.+.+.+
T Consensus 290 ~~~~~~~Ea~~~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~--~-~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~---- 362 (374)
T cd03817 290 TQGLVLLEAMAAGLPVVAVDAPGLPDLVADGENGFLFPPGD--E-ALAEALLRLLQDPELRRRLSKNAEESAEKFS---- 362 (374)
T ss_pred CcChHHHHHHHcCCcEEEeCCCChhhheecCceeEEeCCCC--H-HHHHHHHHHHhChHHHHHHHHHHHHHHHHHH----
Confidence 99999999999999999999999999999999999999887 5 9999999999999999999999999998744
Q ss_pred HHHHHHHHHHH
Q 011954 450 MSQRIALVLRE 460 (474)
Q Consensus 450 ~~~~~~~~~~~ 460 (474)
+++++.++|++
T Consensus 363 ~~~~~~~~~~~ 373 (374)
T cd03817 363 FAKKVEKLYEE 373 (374)
T ss_pred HHHHHHHHHhc
Confidence 66777777764
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. |
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-36 Score=295.83 Aligned_cols=342 Identities=20% Similarity=0.183 Sum_probs=237.6
Q ss_pred EEEEEecCCCCC-ChhHHHHHHHHHHHhc--CcEEEEEeCCCCCCchhhh----hhcccchhccceeeeeh---------
Q 011954 76 LVLLVSHELSLS-GGPLLLMELAFLLRGV--GAEVVWITNQKPNEPDEVI----YSLEHKMLDRGVQVLSA--------- 139 (474)
Q Consensus 76 kIl~v~~~~~~g-G~~~~~~~l~~~L~~~--G~~V~v~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~--------- 139 (474)
.|.|++|+.+.| |+||++.+.+.+|.+. ||+|+|+|.+......... ..+.... ..++.++..
T Consensus 2 ~~~f~hp~~~~ggg~ervl~~a~~~l~~~~~~~~v~i~t~~~~~~~~~~l~~~~~~f~~~~-~~~~~~~~~~~~~~~~~~ 80 (419)
T cd03806 2 TVGFFHPYCNAGGGGERVLWCAVRALQKRYPNNIVVIYTGDLDATPEEILEKVESRFNIEL-DRPRIVFFLLKYRKLVEA 80 (419)
T ss_pred eEEEECCCCCCCCCchHHHHHHHHHHHHhCCCcEEEEECCCCCCCHHHHHHHHHHhcCeec-CCCceEEEEecceeeecc
Confidence 589999999997 7799999999999998 8999999977655331111 1111111 111111110
Q ss_pred ---h----------cHH---HHhhhcCCCEEEEcccchhhH-HhHHhhhcccccccceeeeeecccc--ccc--------
Q 011954 140 ---K----------GEK---AINTALNADLVVLNTAVAGKW-LDGVLKDKVSQVLPKVLWWIHEMRG--HYF-------- 192 (474)
Q Consensus 140 ---~----------~~~---~~~~~~~~DiV~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~h~~~~--~~~-------- 192 (474)
. ... ......+||+++.++.++..+ +...+. ..|++.++|-... ...
T Consensus 81 ~~~~r~~~~~~~~~~~~~~~~~~~~~~pDv~i~~~g~~~~~~~~~~~~------~~~~i~y~h~P~~~~d~l~~~~~~~~ 154 (419)
T cd03806 81 STYPRFTLLGQALGSMILGLEALLKLVPDIFIDTMGYPFTYPLVRLLG------GCPVGAYVHYPTISTDMLQKVRSREA 154 (419)
T ss_pred ccCCceeeHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccHHHHHHHhc------CCeEEEEecCCcchHHHHHHHhhccc
Confidence 0 000 111135799999887554432 222211 2488999993200 000
Q ss_pred -----------------hh--------hhhhcccccccccccccccHHHHHHhHHHHhcCCCCCeEEEeCCCCccccchh
Q 011954 193 -----------------KL--------EYVKHLPFVAGAMIDSYTTAEYWKNRTRERLGIRMPETYVVHLGNSKDLMDIA 247 (474)
Q Consensus 193 -----------------~~--------~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~ 247 (474)
+. .+...+..++.++++|..+.+.+.+ .++. ..++.|||||+|.+.+.+.
T Consensus 155 ~~~~~~~~~~~~~~~~~k~~y~~~~~~~~~~~~~~aD~ii~~S~~~~~~~~~----~~~~-~~~~~vi~~gvd~~~~~~~ 229 (419)
T cd03806 155 SYNNSATIARSPVLSKAKLLYYRLFAFLYGLAGSFADVVMVNSTWTRNHIRS----LWKR-NTKPSIVYPPCDVEELLKL 229 (419)
T ss_pred cccCccchhccchHHHHHHHHHHHHHHHHHHHhhcCCEEEECCHHHHHHHHH----HhCc-CCCcEEEcCCCCHHHhccc
Confidence 00 1112234556667776666655443 3332 2589999999998876543
Q ss_pred hhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcC-chHHH
Q 011954 248 EDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQ-TKFET 326 (474)
Q Consensus 248 ~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~-~~~~~ 326 (474)
+. ....+..+|+++||+.+.||++.+++|++++.+...+. ..++++|+|+|++.... .++.+
T Consensus 230 ~~---------------~~~~~~~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~--~~~~~~lvivG~~~~~~~~~~~~ 292 (419)
T cd03806 230 PL---------------DEKTRENQILSIAQFRPEKNHPLQLRAFAKLLKRLPEE--IKEKIKLVLIGSCRNEDDEKRVE 292 (419)
T ss_pred cc---------------ccccCCcEEEEEEeecCCCCHHHHHHHHHHHHHhCccc--ccCceEEEEEcCCCCcccHHHHH
Confidence 21 01245678999999999999999999999887632110 01359999999875332 23678
Q ss_pred HHHHHHHHcCCCCeEEEecCC--CChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCc-ceeee---eC
Q 011954 327 ELRNFVAEKKIQDHVHFVNKT--LTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGT-MEIVV---NG 400 (474)
Q Consensus 327 ~l~~~~~~~~l~~~v~~~g~~--~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~-~e~v~---~~ 400 (474)
+++++++++++.++|+|+|+. +++..+|+.||++|+||. .|+||++++||||||+|||+++.||. .|++. ++
T Consensus 293 ~L~~~~~~l~l~~~V~f~g~v~~~~l~~~l~~adv~v~~s~--~E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g 370 (419)
T cd03806 293 DLKLLAKELGLEDKVEFVVNAPFEELLEELSTASIGLHTMW--NEHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDGG 370 (419)
T ss_pred HHHHHHHHhCCCCeEEEecCCCHHHHHHHHHhCeEEEECCc--cCCcccHHHHHHHcCCcEEEEcCCCCchheeeccCCC
Confidence 899999999999999999974 789999999999999998 89999999999999999999999876 67887 78
Q ss_pred CceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHH
Q 011954 401 TTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRFLEHHMSQ 452 (474)
Q Consensus 401 ~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~fs~~~~~~ 452 (474)
.+|++++ | +++++++|.+++++++...++..++++.+.++||++.+.+
T Consensus 371 ~~G~l~~--d--~~~la~ai~~ll~~~~~~~~~~~~~~~~~~~~fs~~~f~~ 418 (419)
T cd03806 371 PTGFLAS--T--AEEYAEAIEKILSLSEEERLRIRRAARSSVKRFSDEEFER 418 (419)
T ss_pred CceEEeC--C--HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhCHHHhcc
Confidence 9999984 5 9999999999999655444434555556778899998764
|
ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. |
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-36 Score=292.37 Aligned_cols=331 Identities=17% Similarity=0.226 Sum_probs=230.5
Q ss_pred EEEEEecC-CCC--CChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhcccchhccceeeeehh------------
Q 011954 76 LVLLVSHE-LSL--SGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEHKMLDRGVQVLSAK------------ 140 (474)
Q Consensus 76 kIl~v~~~-~~~--gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 140 (474)
||++++.. +++ ||+++++.+++++|.++||+|+|++......... ....++.+....
T Consensus 1 ~i~~i~~~~~~~~~gG~~~~~~~la~~L~~~g~~v~v~~~~~~~~~~~--------~~~~~i~~~~~~~~~~~~~~~~~~ 72 (363)
T cd04955 1 KIAIIGTRGIPAKYGGFETFVEELAPRLVARGHEVTVYCRSPYPKQKE--------TEYNGVRLIHIPAPEIGGLGTIIY 72 (363)
T ss_pred CeEEEecCcCCcccCcHHHHHHHHHHHHHhcCCCEEEEEccCCCCCcc--------cccCCceEEEcCCCCccchhhhHH
Confidence 58899765 322 8889999999999999999999999654322110 011122221110
Q ss_pred cHHHHhhh--cCCCEEEEcc--cchhhHHhHHhhhcccccccceeeeeeccccccch-----hhhh-----hcccccccc
Q 011954 141 GEKAINTA--LNADLVVLNT--AVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYFK-----LEYV-----KHLPFVAGA 206 (474)
Q Consensus 141 ~~~~~~~~--~~~DiV~~~~--~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~-----~~~~-----~~~~~~~~~ 206 (474)
....+... .++|++|+|. +....+... ... ...+++++.|+....... ..+. ..+...+.+
T Consensus 73 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~----~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~i 147 (363)
T cd04955 73 DILAILHALFVKRDIDHVHALGPAIAPFLPL-LRL----KGKKVVVNMDGLEWKRAKWGRPAKRYLKFGEKLAVKFADRL 147 (363)
T ss_pred HHHHHHHHHhccCCeEEEEecCccHHHHHHH-HHh----cCCCEEEEccCcceeecccccchhHHHHHHHHHHHhhccEE
Confidence 01111111 2455555544 332222111 111 246888888875311100 0111 122344555
Q ss_pred cccccccHHHHHHhHHHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchH
Q 011954 207 MIDSYTTAEYWKNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQD 286 (474)
Q Consensus 207 ~~~s~~~~~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~ 286 (474)
++.|....+. +...++.+. .+||||+|...+.+. ...++.++.+++. .++++||+.+.||++
T Consensus 148 i~~s~~~~~~----~~~~~~~~~---~~i~ngv~~~~~~~~----------~~~~~~~~~~~~~-~i~~~G~~~~~Kg~~ 209 (363)
T cd04955 148 IADSPGIKEY----LKEKYGRDS---TYIPYGADHVVSSEE----------DEILKKYGLEPGR-YYLLVGRIVPENNID 209 (363)
T ss_pred EeCCHHHHHH----HHHhcCCCC---eeeCCCcChhhcchh----------hhhHHhcCCCCCc-EEEEEecccccCCHH
Confidence 5555555444 434566432 899999998876541 1234455655444 577999999999999
Q ss_pred HHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHH-HcCCCCeEEEecCC--CChHHHHhcCCEEEEc
Q 011954 287 LFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVA-EKKIQDHVHFVNKT--LTVSPYLASIDVLVQN 363 (474)
Q Consensus 287 ~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~-~~~l~~~v~~~g~~--~~~~~~~~~adv~v~p 363 (474)
.+++|++++. .+++|+++|+++. ...+.+.+. .++..++|+|+|++ +++..+|..||++++|
T Consensus 210 ~li~a~~~l~----------~~~~l~ivG~~~~-----~~~~~~~~~~~~~~~~~V~~~g~~~~~~~~~~~~~ad~~v~p 274 (363)
T cd04955 210 DLIEAFSKSN----------SGKKLVIVGNADH-----NTPYGKLLKEKAAADPRIIFVGPIYDQELLELLRYAALFYLH 274 (363)
T ss_pred HHHHHHHhhc----------cCceEEEEcCCCC-----cchHHHHHHHHhCCCCcEEEccccChHHHHHHHHhCCEEEeC
Confidence 9999998762 3799999999852 233333433 67778899999975 6788999999999999
Q ss_pred CCCCCCCCchHHHHHHhcCCCEEEcCCCCcceeeeeCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHH
Q 011954 364 SQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKD 443 (474)
Q Consensus 364 s~~~~E~~~~~~~EAma~G~PvI~s~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~ 443 (474)
|.. .|+||++++|||+||+|||+|+.|+..|++.+ +|+++++++ . ++++|.+++++++.+.++++++++.+.+
T Consensus 275 s~~-~e~~~~~~~EAma~G~PvI~s~~~~~~e~~~~--~g~~~~~~~--~--l~~~i~~l~~~~~~~~~~~~~~~~~~~~ 347 (363)
T cd04955 275 GHS-VGGTNPSLLEAMAYGCPVLASDNPFNREVLGD--KAIYFKVGD--D--LASLLEELEADPEEVSAMAKAARERIRE 347 (363)
T ss_pred Ccc-CCCCChHHHHHHHcCCCEEEecCCccceeecC--CeeEecCch--H--HHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 982 39999999999999999999999999999954 899998866 3 9999999999999999999999999999
Q ss_pred hcCHHHHHHHHHHHHH
Q 011954 444 RFLEHHMSQRIALVLR 459 (474)
Q Consensus 444 ~fs~~~~~~~~~~~~~ 459 (474)
+|||+.++++++++|+
T Consensus 348 ~fs~~~~~~~~~~~y~ 363 (363)
T cd04955 348 KYTWEKIADQYEELYK 363 (363)
T ss_pred hCCHHHHHHHHHHHhC
Confidence 9999999999999984
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=292.59 Aligned_cols=336 Identities=23% Similarity=0.272 Sum_probs=257.0
Q ss_pred EEEEEecCCCCCChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhc------ccchhccceeeeehhcHHHHhhhc
Q 011954 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSL------EHKMLDRGVQVLSAKGEKAINTAL 149 (474)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 149 (474)
||+++++.+..||+++++..++++|.+.||+|.+++.............. ...................+.+..
T Consensus 1 kIl~~~~~~~~gG~~~~~~~l~~~l~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (353)
T cd03811 1 KILFVIPSLGGGGAERVLLNLANGLDKRGYDVTLVVLRDEGDYLELLPSNVKLIPVRVLKLKSLRDLLAILRLRRLLRKE 80 (353)
T ss_pred CeEEEeecccCCCcchhHHHHHHHHHhcCceEEEEEcCCCCccccccccchhhhceeeeecccccchhHHHHHHHHHHhc
Confidence 68999998888999999999999999999999999965443221111100 000000011111223445566678
Q ss_pred CCCEEEEccc-chhhHHhHHhhhcccccccceeeeeeccccccchh------hhhhcccccccccccccccHHHHHHhHH
Q 011954 150 NADLVVLNTA-VAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYFKL------EYVKHLPFVAGAMIDSYTTAEYWKNRTR 222 (474)
Q Consensus 150 ~~DiV~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~------~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 222 (474)
+||+||++.. ....+ .. +.... ..++++++|+........ .....+...+.+++.+....+.+.+
T Consensus 81 ~~dii~~~~~~~~~~~-~~-~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~--- 152 (353)
T cd03811 81 KPDVVISHLTTTPNVL-AL-LAARL---GTKLIVWEHNSLSLELKRKLRLLLLIRKLYRRADKIVAVSEGVKEDLLK--- 152 (353)
T ss_pred CCCEEEEcCccchhHH-HH-HHhhc---CCceEEEEcCcchhhhccchhHHHHHHhhccccceEEEeccchhhhHHH---
Confidence 9999999987 32222 22 22111 468899999875433321 1334456777777777776665544
Q ss_pred HHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHHHHHHHHHHHHHHHHh
Q 011954 223 ERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREK 302 (474)
Q Consensus 223 ~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~ 302 (474)
.++.+..++.+||||+|.+.+.+..... . .++.+.++++++++|++.+.||++.+++++..+.+
T Consensus 153 -~~~~~~~~~~vi~~~~~~~~~~~~~~~~--------~--~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~l~~----- 216 (353)
T cd03811 153 -LLGIPPDKIEVIYNPIDIEEIRALAEEP--------L--ELGIPPDGPVILAVGRLSPQKGFDTLIRAFALLRK----- 216 (353)
T ss_pred -hhcCCccccEEecCCcChhhcCcccchh--------h--hcCCCCCceEEEEEecchhhcChHHHHHHHHHhhh-----
Confidence 4555568899999999998876543210 0 34456778999999999999999999999998865
Q ss_pred ccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCCCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcC
Q 011954 303 KLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQ 382 (474)
Q Consensus 303 ~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G 382 (474)
+.++++|+++|.++ ....++++++++++.++|.+.|+.+++.++|+.||++++||. .|++|++++|||++|
T Consensus 217 --~~~~~~l~i~G~~~-----~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~d~~i~ps~--~e~~~~~~~Ea~~~G 287 (353)
T cd03811 217 --EGPDARLVILGDGP-----LREELEALAKELGLADRVHFLGFQSNPYPYLKAADLFVLSSR--YEGFPNVLLEAMALG 287 (353)
T ss_pred --cCCCceEEEEcCCc-----cHHHHHHHHHhcCCCccEEEecccCCHHHHHHhCCEEEeCcc--cCCCCcHHHHHHHhC
Confidence 34789999999986 677888999999999999999999999999999999999999 899999999999999
Q ss_pred CCEEEcCCCCcceeeeeCCceeeecCCCCChHHH---HHHHHHHhhCHHHHHHHHHHHHHHHHHhcC
Q 011954 383 LPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPL---ANNIVKLATHVERRLTMGKKGYERVKDRFL 446 (474)
Q Consensus 383 ~PvI~s~~~g~~e~v~~~~~G~l~~~~d~~~~~l---a~~i~~ll~~~~~~~~~~~~~~~~~~~~fs 446 (474)
+|||+++.||..|++.++.+|+++++++ .+++ ++++..+.++++.++++++++++.+.++|+
T Consensus 288 ~PvI~~~~~~~~e~i~~~~~g~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (353)
T cd03811 288 TPVVATDCPGPREILEDGENGLLVPVGD--EAALAAAALALLDLLLDPELRERLAAAARERVAREYS 352 (353)
T ss_pred CCEEEcCCCChHHHhcCCCceEEECCCC--HHHHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999988 8888 788888888999999999988998888886
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. |
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-36 Score=289.52 Aligned_cols=331 Identities=21% Similarity=0.256 Sum_probs=246.3
Q ss_pred EEEEEecCCCCCChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhcccchhccceeeee----------------h
Q 011954 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEHKMLDRGVQVLS----------------A 139 (474)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~ 139 (474)
||+++++. .||.+.++..++++|.+.||+|++++........ ....++.+.. .
T Consensus 1 kIl~i~~~--~~g~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (359)
T cd03808 1 KILHIVTV--DGGLYSFRLPLIKALRAAGYEVHVVAPPGDELEE---------LEALGVKVIPIPLDRRGINPFKDLKAL 69 (359)
T ss_pred CeeEEEec--chhHHHHHHHHHHHHHhcCCeeEEEecCCCcccc---------cccCCceEEeccccccccChHhHHHHH
Confidence 58999987 6777899999999999999999999966543210 0111111111 1
Q ss_pred hcHHHHhhhcCCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccccchhh---------hhhcccccccccccc
Q 011954 140 KGEKAINTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYFKLE---------YVKHLPFVAGAMIDS 210 (474)
Q Consensus 140 ~~~~~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~---------~~~~~~~~~~~~~~s 210 (474)
.......+..+||+||+++.....+...... .. ..+++++..|+......... ....+...+.+++.+
T Consensus 70 ~~~~~~~~~~~~dvv~~~~~~~~~~~~~~~~-~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s 146 (359)
T cd03808 70 LRLYRLLRKERPDIVHTHTPKPGILGRLAAR-LA--GVPKVIYTVHGLGFVFTSGGLKRRLYLLLERLALRFTDKVIFQN 146 (359)
T ss_pred HHHHHHHHhcCCCEEEEccccchhHHHHHHH-Hc--CCCCEEEEecCcchhhccchhHHHHHHHHHHHHHhhccEEEEcC
Confidence 1233455568999999997654433222221 11 23467777776532211111 122234445555655
Q ss_pred cccHHHHHHhHHHHhcCC-CCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHHHH
Q 011954 211 YTTAEYWKNRTRERLGIR-MPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFL 289 (474)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~-~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~ll 289 (474)
....+.+.. ....+ ..++.++++|+|.+.+.+.... .+.++++++++|++.+.||++.++
T Consensus 147 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~i~~~G~~~~~k~~~~li 207 (359)
T cd03808 147 EDDRDLALK----LGIIKKKKTVLIPGSGVDLDRFSPSPEP---------------IPEDDPVFLFVARLLKDKGIDELL 207 (359)
T ss_pred HHHHHHHHH----hcCCCcCceEEecCCCCChhhcCccccc---------------cCCCCcEEEEEeccccccCHHHHH
Confidence 555544433 33222 4678888999998877654310 135678999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHH-HHHHcCCCCeEEEecCCCChHHHHhcCCEEEEcCCCCC
Q 011954 290 HSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRN-FVAEKKIQDHVHFVNKTLTVSPYLASIDVLVQNSQARG 368 (474)
Q Consensus 290 ~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~-~~~~~~l~~~v~~~g~~~~~~~~~~~adv~v~ps~~~~ 368 (474)
+++..+.+ ++++++|+|+|.++.. ..... ++.+.+..++|+|+|+.+++.++|+.||++++||. .
T Consensus 208 ~~~~~l~~-------~~~~~~l~i~G~~~~~-----~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~adi~i~ps~--~ 273 (359)
T cd03808 208 EAARILKA-------KGPNVRLLLVGDGDEE-----NPAAILEIEKLGLEGRVEFLGFRDDVPELLAAADVFVLPSY--R 273 (359)
T ss_pred HHHHHHHh-------cCCCeEEEEEcCCCcc-----hhhHHHHHHhcCCcceEEEeeccccHHHHHHhccEEEecCc--c
Confidence 99998865 4589999999998632 22222 36677778899999999999999999999999999 7
Q ss_pred CCCchHHHHHHhcCCCEEEcCCCCcceeeeeCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHH
Q 011954 369 ECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRFLEH 448 (474)
Q Consensus 369 E~~~~~~~EAma~G~PvI~s~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~fs~~ 448 (474)
|++|++++|||+||+|||+|+.++..|++.++.+|++++++| +++++++|.+++.+++.+.++++++++++.++|+|+
T Consensus 274 e~~~~~~~Ea~~~G~Pvi~s~~~~~~~~i~~~~~g~~~~~~~--~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~ 351 (359)
T cd03808 274 EGLPRVLLEAMAMGRPVIATDVPGCREAVIDGVNGFLVPPGD--AEALADAIERLIEDPELRARMGQAARKRAEEEFDEE 351 (359)
T ss_pred cCcchHHHHHHHcCCCEEEecCCCchhhhhcCcceEEECCCC--HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCHH
Confidence 999999999999999999999999999999899999999988 999999999999999999999999999999999999
Q ss_pred HHHHHHH
Q 011954 449 HMSQRIA 455 (474)
Q Consensus 449 ~~~~~~~ 455 (474)
.++++++
T Consensus 352 ~~~~~~~ 358 (359)
T cd03808 352 IVVKKLL 358 (359)
T ss_pred HHHHHhh
Confidence 9999876
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. |
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-36 Score=292.93 Aligned_cols=346 Identities=12% Similarity=0.063 Sum_probs=235.7
Q ss_pred cCEEEEEecCCCCCChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhcccchhccceeeeehh-------------
Q 011954 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEHKMLDRGVQVLSAK------------- 140 (474)
Q Consensus 74 ~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 140 (474)
.++|++++. ...|++..+..++++|.++||+|+|++...+....+. ....++.++...
T Consensus 3 ~~~~~~~~~--~~~~~~~R~~~~a~~L~~~G~~V~ii~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~~~~~~~~~ 73 (415)
T cd03816 3 RKRVCVLVL--GDIGRSPRMQYHALSLAKHGWKVDLVGYLETPPHDEI-------LSNPNITIHPLPPPPQRLNKLPFLL 73 (415)
T ss_pred ccEEEEEEe--cccCCCHHHHHHHHHHHhcCceEEEEEecCCCCCHHH-------hcCCCEEEEECCCCccccccchHHH
Confidence 567888886 3356667778899999999999999996543321110 111222222111
Q ss_pred ------------cHHHHhhhcCCCEEEEcccch--hhHHhHHhhhcccccccceeeeeeccccccc------hh---hh-
Q 011954 141 ------------GEKAINTALNADLVVLNTAVA--GKWLDGVLKDKVSQVLPKVLWWIHEMRGHYF------KL---EY- 196 (474)
Q Consensus 141 ------------~~~~~~~~~~~DiV~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~------~~---~~- 196 (474)
..+.+....+||+||+|++.. ..+...+.+.. ...|++.++|+...... .. .+
T Consensus 74 ~~~~~~~~~~~~~~~~l~~~~~~Dvi~~~~~~~~~~~~~a~~~~~~---~~~~~V~~~h~~~~~~~~~~~~~~~~~~~~~ 150 (415)
T cd03816 74 FAPLKVLWQFFSLLWLLYKLRPADYILIQNPPSIPTLLIAWLYCLL---RRTKLIIDWHNYGYTILALKLGENHPLVRLA 150 (415)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHH---hCCeEEEEcCCchHHHHhcccCCCCHHHHHH
Confidence 011123446899999987443 22222222221 23578888997531100 00 11
Q ss_pred ----hhcccccccccccccccHHHHHHhHHHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHH----------
Q 011954 197 ----VKHLPFVAGAMIDSYTTAEYWKNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRE---------- 262 (474)
Q Consensus 197 ----~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~---------- 262 (474)
...++.++.+++.|..+.+++ .+ ++.+.+++.|||||. .+.|.+...... ...+.+
T Consensus 151 ~~~e~~~~~~ad~ii~vS~~~~~~l----~~-~~~~~~ki~vI~Ng~-~~~f~p~~~~~~----~~~~~~~~~~~~~~~~ 220 (415)
T cd03816 151 KWYEKLFGRLADYNLCVTKAMKEDL----QQ-FNNWKIRATVLYDRP-PEQFRPLPLEEK----HELFLKLAKTFLTREL 220 (415)
T ss_pred HHHHHHHhhcCCEeeecCHHHHHHH----Hh-hhccCCCeeecCCCC-HHHceeCcHHHH----HHHHHhcccccccccc
Confidence 112345566666666665554 33 577889999999994 455655432211 111111
Q ss_pred ---hcCC-CCCCEEEEEecccccCcchHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCC
Q 011954 263 ---SLGV-RDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQ 338 (474)
Q Consensus 263 ---~~~~-~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~ 338 (474)
..++ +++..+++++||+.+.||++.+++|+..+.+...+. .++|+++|+|+|+|+ ..++++++++++++.
T Consensus 221 ~~~~~~~~~~~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~-~~~~~i~l~ivG~G~-----~~~~l~~~~~~~~l~ 294 (415)
T cd03816 221 RIGAVQLSEERPALLVSSTSWTPDEDFGILLDALVAYEKSAATG-PKLPKLLCIITGKGP-----LKEKYLERIKELKLK 294 (415)
T ss_pred ccccceecCCCceEEEEeccccCCCCHHHHHHHHHHHHHhhccc-ccCCCEEEEEEecCc-----cHHHHHHHHHHcCCC
Confidence 1112 244577888999999999999999999886532110 023689999999996 789999999999997
Q ss_pred CeEEEecCC--CChHHHHhcCCEEEEcCCC-CCCCCchHHHHHHhcCCCEEEcCCCCcceeeeeCCceeeecCCCCChHH
Q 011954 339 DHVHFVNKT--LTVSPYLASIDVLVQNSQA-RGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTP 415 (474)
Q Consensus 339 ~~v~~~g~~--~~~~~~~~~adv~v~ps~~-~~E~~~~~~~EAma~G~PvI~s~~~g~~e~v~~~~~G~l~~~~d~~~~~ 415 (474)
+.+.+.|+. +++.++|+.||++|.|+.. ..|++|++++||||||+|||+|+.||..|+++++.+|++++ | +++
T Consensus 295 ~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~~~~eiv~~~~~G~lv~--d--~~~ 370 (415)
T cd03816 295 KVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCIDELVKHGENGLVFG--D--SEE 370 (415)
T ss_pred cEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCCCHHHHhcCCCCEEEEC--C--HHH
Confidence 555555653 8999999999999975321 15789999999999999999999999999999999999994 5 999
Q ss_pred HHHHHHHHhhC---HHHHHHHHHHHHHHHHHhcCHHHHHHH
Q 011954 416 LANNIVKLATH---VERRLTMGKKGYERVKDRFLEHHMSQR 453 (474)
Q Consensus 416 la~~i~~ll~~---~~~~~~~~~~~~~~~~~~fs~~~~~~~ 453 (474)
++++|..+++| ++.+++|++++++..+ ++|+....+
T Consensus 371 la~~i~~ll~~~~~~~~~~~m~~~~~~~~~--~~~~~~~~~ 409 (415)
T cd03816 371 LAEQLIDLLSNFPNRGKLNSLKKGAQEESE--LRWDENWDR 409 (415)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHhhh--cCHHHHHHH
Confidence 99999999999 9999999999999874 555554443
|
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. |
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-36 Score=295.52 Aligned_cols=341 Identities=19% Similarity=0.145 Sum_probs=248.5
Q ss_pred EEEEEecCCCC---CChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhcccch-h-ccce-----eeeehhcHHHH
Q 011954 76 LVLLVSHELSL---SGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEHKM-L-DRGV-----QVLSAKGEKAI 145 (474)
Q Consensus 76 kIl~v~~~~~~---gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~-~-~~~~-----~~~~~~~~~~~ 145 (474)
||++++.++.+ ||+++++.+|+++|.+.|++|++++.................. . .... ...........
T Consensus 1 ~ili~~~~~~~~~~gG~~~~~~~l~~~L~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (365)
T cd03809 1 RILIDARFLASRRPTGIGRYARELLRALLKLDPEEVLLLLPGAPGLLLLPLRAALRLLLRLPRRLLWGLLFLLRAGDRLL 80 (365)
T ss_pred CEEEechhhhcCCCCcHHHHHHHHHHHHHhcCCceEEEEecCccccccccchhccccccccccccccchhhHHHHHHHHH
Confidence 58888888765 8889999999999999999999999654432221111000000 0 0000 00011122233
Q ss_pred hhhcCCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccccch------------hhhhhccccccccccccccc
Q 011954 146 NTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYFK------------LEYVKHLPFVAGAMIDSYTT 213 (474)
Q Consensus 146 ~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~------------~~~~~~~~~~~~~~~~s~~~ 213 (474)
....++|+||+++...... .....+++.++|+....... ......+...+.+++.+...
T Consensus 81 ~~~~~~Dii~~~~~~~~~~---------~~~~~~~i~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~ 151 (365)
T cd03809 81 LLLLGLDLLHSPHNTAPLL---------RLRGVPVVVTIHDLIPLRFPEYFSPGFRRYFRRLLRRALRRADAIITVSEAT 151 (365)
T ss_pred hhhcCCCeeeecccccCcc---------cCCCCCEEEEeccchhhhCcccCCHHHHHHHHHHHHHHHHHcCEEEEccHHH
Confidence 3347899999998655443 12346888999986422211 11222234555555555544
Q ss_pred HHHHHHhHHHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHHHHHHHH
Q 011954 214 AEYWKNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFY 293 (474)
Q Consensus 214 ~~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~ 293 (474)
.+.+.+.++.+..++.++|||+|.+.+...... . +.......++++++++|++.+.||++.+++++.
T Consensus 152 ----~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~--------~-~~~~~~~~~~~~i~~~G~~~~~K~~~~~l~~~~ 218 (365)
T cd03809 152 ----KRDLLRYLGVPPDKIVVIPLGVDPRFRPPPAEA--------E-VLRALYLLPRPYFLYVGTIEPRKNLERLLEAFA 218 (365)
T ss_pred ----HHHHHHHhCcCHHHEEeeccccCccccCCCchH--------H-HHHHhcCCCCCeEEEeCCCccccCHHHHHHHHH
Confidence 444555566677889999999999887654321 1 333344567789999999999999999999999
Q ss_pred HHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCC--CChHHHHhcCCEEEEcCCCCCCCC
Q 011954 294 ESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKT--LTVSPYLASIDVLVQNSQARGECF 371 (474)
Q Consensus 294 ~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~--~~~~~~~~~adv~v~ps~~~~E~~ 371 (474)
.+.+ ..++++|+++|.++.. .....+..++++..++|+++|+. +++.++|+.||++++||. .|++
T Consensus 219 ~~~~-------~~~~~~l~i~G~~~~~----~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~d~~l~ps~--~e~~ 285 (365)
T cd03809 219 RLPA-------KGPDPKLVIVGKRGWL----NEELLARLRELGLGDRVRFLGYVSDEELAALYRGARAFVFPSL--YEGF 285 (365)
T ss_pred HHHH-------hcCCCCEEEecCCccc----cHHHHHHHHHcCCCCeEEECCCCChhHHHHHHhhhhhhcccch--hccC
Confidence 8866 3357999999987532 23333333678888999999986 889999999999999998 8999
Q ss_pred chHHHHHHhcCCCEEEcCCCCcceeeeeCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHH
Q 011954 372 GRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRFLEHHMS 451 (474)
Q Consensus 372 ~~~~~EAma~G~PvI~s~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~fs~~~~~ 451 (474)
|++++|||++|+|||+++.|+..|++ +.+|+++++.| +++++++|.++++|++.+.++++++++.+ ++|+|++++
T Consensus 286 ~~~~~Ea~a~G~pvI~~~~~~~~e~~--~~~~~~~~~~~--~~~~~~~i~~l~~~~~~~~~~~~~~~~~~-~~~sw~~~~ 360 (365)
T cd03809 286 GLPVLEAMACGTPVIASNISSLPEVA--GDAALYFDPLD--PEALAAAIERLLEDPALREELRERGLARA-KRFSWEKTA 360 (365)
T ss_pred CCCHHHHhcCCCcEEecCCCCcccee--cCceeeeCCCC--HHHHHHHHHHHhcCHHHHHHHHHHHHHHH-HhCCHHHHH
Confidence 99999999999999999999999998 45799999988 99999999999999999999999999766 559999999
Q ss_pred HHHHH
Q 011954 452 QRIAL 456 (474)
Q Consensus 452 ~~~~~ 456 (474)
+++.+
T Consensus 361 ~~~~~ 365 (365)
T cd03809 361 RRTLD 365 (365)
T ss_pred HHHhC
Confidence 98863
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. |
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-36 Score=290.95 Aligned_cols=335 Identities=19% Similarity=0.154 Sum_probs=241.0
Q ss_pred EEEEEecCCCC---CChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhcccchhc-------cce--------ee-
Q 011954 76 LVLLVSHELSL---SGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEHKMLD-------RGV--------QV- 136 (474)
Q Consensus 76 kIl~v~~~~~~---gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~-------~~~--------~~- 136 (474)
|||++++.+++ ||+++++.+++++|.++||+|++++.................... ... ..
T Consensus 1 kIl~i~~~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (359)
T cd03823 1 RILVVNHLYPPRSVGGAEVVAHDLAEALAKRGHEVAVLTAGEDPPRQDKEVIGVVVYGRPIDEVLRSALPRDLFHLSDYD 80 (359)
T ss_pred CeeEEcccCCcccccchHHHHHHHHHHHHhcCCceEEEeCCCCCCCcccccccceeeccccccccCCCchhhhhHHHhcc
Confidence 59999988766 678899999999999999999999965433221110000000000 000 00
Q ss_pred --eehhcHHHHhhhcCCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccccchhhhhhcccccccccccccccH
Q 011954 137 --LSAKGEKAINTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYFKLEYVKHLPFVAGAMIDSYTTA 214 (474)
Q Consensus 137 --~~~~~~~~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 214 (474)
........+.+..+||+||+++............ .....|++.++|+........... ....+.+++.+....
T Consensus 81 ~~~~~~~~~~~~~~~~~dii~~~~~~~~~~~~~~~~---~~~~~~~i~~~hd~~~~~~~~~~~--~~~~d~ii~~s~~~~ 155 (359)
T cd03823 81 NPAVVAEFARLLEDFRPDVVHFHHLQGLGVSILRAA---RDRGIPIVLTLHDYWLICPRQGLF--KKGGDAVIAPSRFLL 155 (359)
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCccchHHHHHHHH---HhcCCCEEEEEeeeeeecchhhhh--ccCCCEEEEeCHHHH
Confidence 0012234555668999999998532211111111 112368888899753222111111 122255666665555
Q ss_pred HHHHHhHHHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHHHHHHHHH
Q 011954 215 EYWKNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYE 294 (474)
Q Consensus 215 ~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~ 294 (474)
+.+.+ .+....++.+|+||+|...+.+... +.+.++++++++|++.+.||++.+++++.+
T Consensus 156 ~~~~~-----~~~~~~~~~vi~n~~~~~~~~~~~~---------------~~~~~~~~i~~~G~~~~~k~~~~li~~~~~ 215 (359)
T cd03823 156 DRYVA-----NGLFAEKISVIRNGIDLDRAKRPRR---------------APPGGRLRFGFIGQLTPHKGVDLLLEAFKR 215 (359)
T ss_pred HHHHH-----cCCCccceEEecCCcChhhcccccc---------------CCCCCceEEEEEecCccccCHHHHHHHHHH
Confidence 54432 3334578999999999988754321 234677899999999999999999999998
Q ss_pred HHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCC--CChHHHHhcCCEEEEcCCCCCCCCc
Q 011954 295 SLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKT--LTVSPYLASIDVLVQNSQARGECFG 372 (474)
Q Consensus 295 l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~--~~~~~~~~~adv~v~ps~~~~E~~~ 372 (474)
+.+ ++++|+++|.++ ......... +..++|+++|+. +++.++|+.||++++||.+ .|++|
T Consensus 216 l~~---------~~~~l~i~G~~~-----~~~~~~~~~---~~~~~v~~~g~~~~~~~~~~~~~ad~~i~ps~~-~e~~~ 277 (359)
T cd03823 216 LPR---------GDIELVIVGNGL-----ELEEESYEL---EGDPRVEFLGAYPQEEIDDFYAEIDVLVVPSIW-PENFP 277 (359)
T ss_pred HHh---------cCcEEEEEcCch-----hhhHHHHhh---cCCCeEEEeCCCCHHHHHHHHHhCCEEEEcCcc-cCCCC
Confidence 854 689999999985 222222222 556899999986 8999999999999999974 79999
Q ss_pred hHHHHHHhcCCCEEEcCCCCcceeeeeCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHH
Q 011954 373 RITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRFLEHHMSQ 452 (474)
Q Consensus 373 ~~~~EAma~G~PvI~s~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~fs~~~~~~ 452 (474)
++++|||+||+|||+|+.++..|++.++.+|++++++| +++++++|.++++|++.++.+++++++.... +.+++
T Consensus 278 ~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d--~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~----~~~~~ 351 (359)
T cd03823 278 LVIREALAAGVPVIASDIGGMAELVRDGVNGLLFPPGD--AEDLAAALERLIDDPDLLERLRAGIEPPRSI----EDQAE 351 (359)
T ss_pred hHHHHHHHCCCCEEECCCCCHHHHhcCCCcEEEECCCC--HHHHHHHHHHHHhChHHHHHHHHhHHHhhhH----HHHHH
Confidence 99999999999999999999999999988999999998 9999999999999999999999998876643 89999
Q ss_pred HHHHHHH
Q 011954 453 RIALVLR 459 (474)
Q Consensus 453 ~~~~~~~ 459 (474)
+++++|+
T Consensus 352 ~~~~~~~ 358 (359)
T cd03823 352 EYLKLYR 358 (359)
T ss_pred HHHHHhh
Confidence 9999886
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). |
| >TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-36 Score=293.08 Aligned_cols=342 Identities=16% Similarity=0.123 Sum_probs=232.2
Q ss_pred EEEEecCCC--C-CChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhcccchhc----------------------
Q 011954 77 VLLVSHELS--L-SGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEHKMLD---------------------- 131 (474)
Q Consensus 77 Il~v~~~~~--~-gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~---------------------- 131 (474)
||++++.++ + +|+...+.+++++|++. |+|+++|.............+......
T Consensus 1 iL~~~~~~P~P~~~G~~~r~~~~~~~L~~~-~~v~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 79 (397)
T TIGR03087 1 ILYLVHRIPYPPNKGDKIRSFHLLRHLAAR-HRVHLGTFVDDPEDWQYAAALRPLCEEVCVVPLDPRVARLRSLLGLLTG 79 (397)
T ss_pred CeeecCCCCCCCCCCCcEeHHHHHHHHHhc-CcEEEEEeCCCcccHHHHHHHHHHhheeEEeecCcHHHHHHHHhhhcCC
Confidence 688888743 3 67778899999999775 999999965432211111111000000
Q ss_pred ccee--eeehh----cHHHHhhhcCCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccccch-----------h
Q 011954 132 RGVQ--VLSAK----GEKAINTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYFK-----------L 194 (474)
Q Consensus 132 ~~~~--~~~~~----~~~~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~-----------~ 194 (474)
.... .+... ....+....++|+||+++...+.++.. .. ...|.+.+.|+.....+. .
T Consensus 80 ~p~~~~~~~~~~~~~~l~~~~~~~~~D~v~~~~~~~~~~~~~----~~--~~~p~i~~~~d~~~~~~~~~~~~~~~~~~~ 153 (397)
T TIGR03087 80 EPLSLPYYRSRRLARWVNALLAAEPVDAIVVFSSAMAQYVTP----HV--RGVPRIVDFVDVDSDKWLQYARTKRWPLRW 153 (397)
T ss_pred CCCcchhhCCHHHHHHHHHHHhhCCCCEEEEeccccceeccc----cc--cCCCeEeehhhHHHHHHHHHHhccCcchhH
Confidence 0000 00011 122344458999999997544333221 01 124777778874311110 0
Q ss_pred hh-----------hhcccccccccccccccHHHHHHhHHHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHh
Q 011954 195 EY-----------VKHLPFVAGAMIDSYTTAEYWKNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRES 263 (474)
Q Consensus 195 ~~-----------~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~ 263 (474)
.+ ...++.++.+++.|....+. +.+..+....++.+||||+|.+.|.+.... .
T Consensus 154 ~~~~~~~~~~~~e~~~~~~ad~vi~~S~~~~~~----l~~~~~~~~~~v~vipngvd~~~f~~~~~~----------~-- 217 (397)
T TIGR03087 154 IYRREGRLLLAYERAIAARFDAATFVSRAEAEL----FRRLAPEAAGRITAFPNGVDADFFSPDRDY----------P-- 217 (397)
T ss_pred HHHHHHHHHHHHHHHHHhhCCeEEEcCHHHHHH----HHHhCCCCCCCeEEeecccchhhcCCCccc----------c--
Confidence 00 11223455555555544444 333344456789999999999988654321 0
Q ss_pred cCCCCCCEEEEEecccccCcchHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEE
Q 011954 264 LGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHF 343 (474)
Q Consensus 264 ~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~ 343 (474)
...+.+..+++|+|++.+.||++.++.++.++...+.+ +.|+++|+|+|+|+ . .+++ +++..++|+|
T Consensus 218 ~~~~~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~---~~p~~~l~ivG~g~-----~-~~~~----~l~~~~~V~~ 284 (397)
T TIGR03087 218 NPYPPGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRA---RRPAAEFYIVGAKP-----S-PAVR----ALAALPGVTV 284 (397)
T ss_pred CCCCCCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHH---HCCCcEEEEECCCC-----h-HHHH----HhccCCCeEE
Confidence 01234567899999999999999998655444333332 34899999999986 2 2333 3344568999
Q ss_pred ecCCCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCcceeeeeCCceeeecCCCCChHHHHHHHHHH
Q 011954 344 VNKTLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKL 423 (474)
Q Consensus 344 ~g~~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~l 423 (474)
+|+++++..+|+.||++|+||.+ .||+|++++|||+||+|||+|+.++. .+...+++|++++ +| +++++++|.++
T Consensus 285 ~G~v~~~~~~~~~adv~v~Ps~~-~eG~~~~~lEAma~G~PVV~t~~~~~-~i~~~~~~g~lv~-~~--~~~la~ai~~l 359 (397)
T TIGR03087 285 TGSVADVRPYLAHAAVAVAPLRI-ARGIQNKVLEAMAMAKPVVASPEAAE-GIDALPGAELLVA-AD--PADFAAAILAL 359 (397)
T ss_pred eeecCCHHHHHHhCCEEEecccc-cCCcccHHHHHHHcCCCEEecCcccc-cccccCCcceEeC-CC--HHHHHHHHHHH
Confidence 99999999999999999999974 79999999999999999999997542 2333456799987 67 99999999999
Q ss_pred hhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 011954 424 ATHVERRLTMGKKGYERVKDRFLEHHMSQRIALVLR 459 (474)
Q Consensus 424 l~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~ 459 (474)
++|++.+++|++++++++.++|||+.+++++.++|+
T Consensus 360 l~~~~~~~~~~~~ar~~v~~~fsw~~~~~~~~~~l~ 395 (397)
T TIGR03087 360 LANPAEREELGQAARRRVLQHYHWPRNLARLDALLE 395 (397)
T ss_pred HcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999885
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=288.53 Aligned_cols=350 Identities=25% Similarity=0.325 Sum_probs=264.8
Q ss_pred EEEEecCCCC---CChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhc--------ccchh---ccc---eeeeeh
Q 011954 77 VLLVSHELSL---SGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSL--------EHKML---DRG---VQVLSA 139 (474)
Q Consensus 77 Il~v~~~~~~---gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~--------~~~~~---~~~---~~~~~~ 139 (474)
||++++.+++ ||+++++..++++|.+.||+|++++.............. ..... ... ......
T Consensus 1 iLii~~~~p~~~~~g~~~~~~~~~~~l~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (377)
T cd03798 1 ILVISSLYPPPNNGGGGIFVKELARALAKRGVEVTVLAPGPWGPKLLDLLKGRLVGVERLPVLLPVVPLLKGPLLYLLAA 80 (377)
T ss_pred CeEeccCCCCCCCchHHHHHHHHHHHHHHCCCceEEEecCCCCCCchhhcccccccccccccCcchhhccccchhHHHHH
Confidence 6788888775 788899999999999999999999965443322111000 00000 000 000111
Q ss_pred hcHHHHhh--hcCCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccccchh------hhhhccccccccccccc
Q 011954 140 KGEKAINT--ALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYFKL------EYVKHLPFVAGAMIDSY 211 (474)
Q Consensus 140 ~~~~~~~~--~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~------~~~~~~~~~~~~~~~s~ 211 (474)
.....+.. ..++|+||++......++....... ...+++.+.|+........ .....+..++.+++.+.
T Consensus 81 ~~~~~~l~~~~~~~dii~~~~~~~~~~~~~~~~~~---~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~ 157 (377)
T cd03798 81 RALLKLLKLKRFRPDLIHAHFAYPDGFAAALLKRK---LGIPLVVTLHGSDVNLLPRKRLLRALLRRALRRADAVIAVSE 157 (377)
T ss_pred HHHHHHHhcccCCCCEEEEeccchHHHHHHHHHHh---cCCCEEEEeecchhcccCchhhHHHHHHHHHhcCCeEEeCCH
Confidence 23344555 7899999999765554444333322 2357888899765433222 22334456666666666
Q ss_pred ccHHHHHHhHHHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHHHHHH
Q 011954 212 TTAEYWKNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHS 291 (474)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a 291 (474)
...+.+.+ .+ .+..++.+++||+|.+.+.+..... . ...+...+.++++++|++.+.||++.++++
T Consensus 158 ~~~~~~~~----~~-~~~~~~~~i~~~~~~~~~~~~~~~~-------~--~~~~~~~~~~~i~~~g~~~~~k~~~~li~~ 223 (377)
T cd03798 158 ALADELKA----LG-IDPEKVTVIPNGVDTERFSPADRAE-------A--RKLGLPEDKKVILFVGRLVPRKGIDYLIEA 223 (377)
T ss_pred HHHHHHHH----hc-CCCCceEEcCCCcCcccCCCcchHH-------H--HhccCCCCceEEEEeccCccccCHHHHHHH
Confidence 65555443 22 5678999999999998887654221 1 334455677999999999999999999999
Q ss_pred HHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCC--CChHHHHhcCCEEEEcCCCCCC
Q 011954 292 FYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKT--LTVSPYLASIDVLVQNSQARGE 369 (474)
Q Consensus 292 ~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~--~~~~~~~~~adv~v~ps~~~~E 369 (474)
+..+.+ ++++++|+|+|.++ ....+++.++++++.++|.+.|+. +++.++|+.||++++||. .|
T Consensus 224 ~~~~~~-------~~~~~~l~i~g~~~-----~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~i~~~~--~~ 289 (377)
T cd03798 224 LARLLK-------KRPDVHLVIVGDGP-----LREALEALAAELGLEDRVTFLGAVPHEEVPAYYAAADVFVLPSL--RE 289 (377)
T ss_pred HHHHHh-------cCCCeEEEEEcCCc-----chHHHHHHHHhcCCcceEEEeCCCCHHHHHHHHHhcCeeecchh--hc
Confidence 998865 44789999999986 567788888889998999999986 679999999999999999 89
Q ss_pred CCchHHHHHHhcCCCEEEcCCCCcceeeeeCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHH
Q 011954 370 CFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRFLEHH 449 (474)
Q Consensus 370 ~~~~~~~EAma~G~PvI~s~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~fs~~~ 449 (474)
++|++++|||++|+|||+++.++..|++.++.+|++++++| +++++++|.+++++++. ++++++++.+.+.|+|+.
T Consensus 290 ~~~~~~~Ea~~~G~pvI~~~~~~~~~~~~~~~~g~~~~~~~--~~~l~~~i~~~~~~~~~--~~~~~~~~~~~~~~s~~~ 365 (377)
T cd03798 290 GFGLVLLEAMACGLPVVATDVGGIPEIITDGENGLLVPPGD--PEALAEAILRLLADPWL--RLGRAARRRVAERFSWEN 365 (377)
T ss_pred cCChHHHHHHhcCCCEEEecCCChHHHhcCCcceeEECCCC--HHHHHHHHHHHhcCcHH--HHhHHHHHHHHHHhhHHH
Confidence 99999999999999999999999999999999999999998 99999999999998886 788899999999999999
Q ss_pred HHHHHHHHHHHH
Q 011954 450 MSQRIALVLREV 461 (474)
Q Consensus 450 ~~~~~~~~~~~~ 461 (474)
+++++.++|+++
T Consensus 366 ~~~~~~~~~~~l 377 (377)
T cd03798 366 VAERLLELYREV 377 (377)
T ss_pred HHHHHHHHHhhC
Confidence 999999998763
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. |
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-35 Score=285.66 Aligned_cols=345 Identities=21% Similarity=0.227 Sum_probs=250.9
Q ss_pred EEEEEecCCCC--CChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhcccchhccceeeeeh--------------
Q 011954 76 LVLLVSHELSL--SGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEHKMLDRGVQVLSA-------------- 139 (474)
Q Consensus 76 kIl~v~~~~~~--gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 139 (474)
|||++++.+++ ||++.++..++++|.+.||+|++++............. .......++.+...
T Consensus 1 kIl~i~~~~~~~~~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (394)
T cd03794 1 KILILSQYFPPELGGGAFRTTELAEELVKRGHEVTVITGSPNYPSGKIYKG-YKREEVDGVRVHRVPLPPYKKNGLLKRL 79 (394)
T ss_pred CEEEEecccCCccCCcceeHHHHHHHHHhCCceEEEEecCCCccccccccc-ceEEecCCeEEEEEecCCCCccchHHHH
Confidence 69999998766 78889999999999999999999996543322211000 00000111111110
Q ss_pred --------hcHHHHh-hhcCCCEEEEcccchh-hHHhHHhhhcccccccceeeeeeccccccch----------------
Q 011954 140 --------KGEKAIN-TALNADLVVLNTAVAG-KWLDGVLKDKVSQVLPKVLWWIHEMRGHYFK---------------- 193 (474)
Q Consensus 140 --------~~~~~~~-~~~~~DiV~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~---------------- 193 (474)
....... ...+||+||++++... .......... ...++++++|+.......
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~~~---~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~ 156 (394)
T cd03794 80 LNYLSFALSALLALLKRRRRPDVIIATSPPLLIALAALLLARL---KGAPFVLEVRDLWPESAVALGLLKNGSLLYRLLR 156 (394)
T ss_pred HhhhHHHHHHHHHHHhcccCCCEEEEcCChHHHHHHHHHHHHh---cCCCEEEEehhhcchhHHHccCccccchHHHHHH
Confidence 0011111 3678999999973222 2222222211 245888999975432111
Q ss_pred hhhhhcccccccccccccccHHHHHHhHHHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEE
Q 011954 194 LEYVKHLPFVAGAMIDSYTTAEYWKNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLF 273 (474)
Q Consensus 194 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i 273 (474)
......+...+.+++.+....+.+. ..+.+..++.++|||++...+.+.... .. +.....+.+++++
T Consensus 157 ~~~~~~~~~~d~vi~~s~~~~~~~~-----~~~~~~~~~~~i~~~~~~~~~~~~~~~-------~~-~~~~~~~~~~~~i 223 (394)
T cd03794 157 KLERLIYRRADAIVVISPGMREYLV-----RRGVPPEKISVIPNGVDLELFKPPPAD-------ES-LRKELGLDDKFVV 223 (394)
T ss_pred HHHHHHHhcCCEEEEECHHHHHHHH-----hcCCCcCceEEcCCCCCHHHcCCccch-------hh-hhhccCCCCcEEE
Confidence 0111223455556655555544433 456778899999999998877654321 11 3344555778999
Q ss_pred EEecccccCcchHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCC--CChH
Q 011954 274 AIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKT--LTVS 351 (474)
Q Consensus 274 ~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~--~~~~ 351 (474)
+++|++.+.||++.+++++.++.+ . ++++|+|+|+|+ ....+++.+...++ ++|.++|+. +++.
T Consensus 224 ~~~G~~~~~k~~~~l~~~~~~l~~-------~-~~~~l~i~G~~~-----~~~~~~~~~~~~~~-~~v~~~g~~~~~~~~ 289 (394)
T cd03794 224 LYAGNIGRAQGLDTLLEAAALLKD-------R-PDIRFLIVGDGP-----EKEELKELAKALGL-DNVTFLGRVPKEELP 289 (394)
T ss_pred EEecCcccccCHHHHHHHHHHHhh-------c-CCeEEEEeCCcc-----cHHHHHHHHHHcCC-CcEEEeCCCChHHHH
Confidence 999999999999999999998865 2 689999999986 56677777666666 579999975 7899
Q ss_pred HHHhcCCEEEEcCCCCCCCC-----chHHHHHHhcCCCEEEcCCCCcceeeeeCCceeeecCCCCChHHHHHHHHHHhhC
Q 011954 352 PYLASIDVLVQNSQARGECF-----GRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATH 426 (474)
Q Consensus 352 ~~~~~adv~v~ps~~~~E~~-----~~~~~EAma~G~PvI~s~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~ 426 (474)
++|+.||++++||. .|++ |++++|||++|+|||+++.++..+++.++.+|++++++| +++++++|.++++|
T Consensus 290 ~~~~~~di~i~~~~--~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~~~~~~g~~~~~~~--~~~l~~~i~~~~~~ 365 (394)
T cd03794 290 ELLAAADVGLVPLK--PGPAFEGVSPSKLFEYMAAGKPVLASVDGESAELVEEAGAGLVVPPGD--PEALAAAILELLDD 365 (394)
T ss_pred HHHHhhCeeEEecc--CcccccccCchHHHHHHHCCCcEEEecCCCchhhhccCCcceEeCCCC--HHHHHHHHHHHHhC
Confidence 99999999999998 5654 888999999999999999999999998888999999988 99999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 011954 427 VERRLTMGKKGYERVKDRFLEHHMSQRIA 455 (474)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~fs~~~~~~~~~ 455 (474)
++.+++|++++++++.++|||+.++++|+
T Consensus 366 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 394 (394)
T cd03794 366 PEERAEMGENGRRYVEEKFSREKLAERLL 394 (394)
T ss_pred hHHHHHHHHHHHHHHHHhhcHHHHHHhcC
Confidence 99999999999999998999999998863
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. |
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-34 Score=281.44 Aligned_cols=340 Identities=19% Similarity=0.172 Sum_probs=243.3
Q ss_pred EEEEecCCCCCChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhh----h-----cc---------------------
Q 011954 77 VLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIY----S-----LE--------------------- 126 (474)
Q Consensus 77 Il~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~----~-----~~--------------------- 126 (474)
+++++..++.+-+|.++..-++.|.+.+.+|+++............. . ..
T Consensus 2 ~~l~t~~~p~~~~~~f~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 81 (407)
T cd04946 2 LILLTNTFPGAKGESFIEPEIKYLSKSFDKIIILPTNVGKEREKVRPNGVSNIIISNYRQDKSRAKLIFLALSVFSLPFY 81 (407)
T ss_pred EEEEecCCCCCCcccccHHHHHHHHhcCCEEEEEecccccccccCCCccccceEEeecccchhhHHHHHHHHHhhhHHHH
Confidence 56777778777778999999999999999999987443221111000 0 00
Q ss_pred -cchhccceee---eeh----hcHH------HH--------hhhcCCCEEEEcccchhhHHhHHhhhcccccccceeeee
Q 011954 127 -HKMLDRGVQV---LSA----KGEK------AI--------NTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWI 184 (474)
Q Consensus 127 -~~~~~~~~~~---~~~----~~~~------~~--------~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 184 (474)
......+... ... .... .+ ....++|++|++...........+.... ..++++.+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~sy~~~~~~~~~~~l~~~~--~~~~~i~~~ 159 (407)
T cd04946 82 KELLKKLKRRRKNIKYFLLLLYFIKRSILLKLKYLHLLIYNSIDGQGTVFYSYWLHETAYALALLKKEY--LRKRVISRA 159 (407)
T ss_pred HHHHHhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCceEEEEecCchHHHHHHHHHHhc--CCceEEEEe
Confidence 0000001000 000 0000 00 0124567777765333333223233222 223588999
Q ss_pred ecccccc--ch----hhhhhcccccccccccccccHHHHHHhHHHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHH
Q 011954 185 HEMRGHY--FK----LEYVKHLPFVAGAMIDSYTTAEYWKNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLRE 258 (474)
Q Consensus 185 h~~~~~~--~~----~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~ 258 (474)
|+..... .. ......+..++.+++.|....++ +.+.++....++.+++||++.+.+.+..
T Consensus 160 Hg~d~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~----l~~~~~~~~~ki~vi~~gv~~~~~~~~~---------- 225 (407)
T cd04946 160 HGYDLYEDRYPSGYIPLRRYLLSSLDAVFPCSEQGRNY----LQKRYPAYKEKIKVSYLGVSDPGIISKP---------- 225 (407)
T ss_pred ccchhhhhhccccchHHHHHHHhcCCEEEECCHHHHHH----HHHHCCCccccEEEEECCcccccccCCC----------
Confidence 9653211 11 11122235666666666665554 4456777788999999999987654321
Q ss_pred HHHHhcCCCCCCEEEEEecccccCcchHHHHHHHHHHHHHHHHhccCCC--cEEEEEEcCCCCcCchHHHHHHHHHHHcC
Q 011954 259 HVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVP--SMHAVVVGSDMNAQTKFETELRNFVAEKK 336 (474)
Q Consensus 259 ~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~--~~~l~i~G~g~~~~~~~~~~l~~~~~~~~ 336 (474)
..++.+.++++|++.+.||++.+++|+.++.+ ++| +++++++|+|+ ..+.+++++++++
T Consensus 226 -------~~~~~~~il~~Grl~~~Kg~~~li~a~~~l~~-------~~p~~~l~~~iiG~g~-----~~~~l~~~~~~~~ 286 (407)
T cd04946 226 -------SKDDTLRIVSCSYLVPVKRVDLIIKALAALAK-------ARPSIKIKWTHIGGGP-----LEDTLKELAESKP 286 (407)
T ss_pred -------CCCCCEEEEEeeccccccCHHHHHHHHHHHHH-------hCCCceEEEEEEeCch-----HHHHHHHHHHhcC
Confidence 12567899999999999999999999999876 233 57788999986 7788999998888
Q ss_pred CCCeEEEecCC--CChHHHHhc--CCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCcceeeeeCCceeeecCC-CC
Q 011954 337 IQDHVHFVNKT--LTVSPYLAS--IDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTG-KE 411 (474)
Q Consensus 337 l~~~v~~~g~~--~~~~~~~~~--adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~~e~v~~~~~G~l~~~~-d~ 411 (474)
..++|+|+|++ +++.++|+. +|++++||. .||+|++++|||+||+|||+|++||.+|++.++.+|++++++ |
T Consensus 287 ~~~~V~f~G~v~~~e~~~~~~~~~~~v~v~~S~--~Eg~p~~llEAma~G~PVIas~vgg~~e~i~~~~~G~l~~~~~~- 363 (407)
T cd04946 287 ENISVNFTGELSNSEVYKLYKENPVDVFVNLSE--SEGLPVSIMEAMSFGIPVIATNVGGTPEIVDNGGNGLLLSKDPT- 363 (407)
T ss_pred CCceEEEecCCChHHHHHHHhhcCCCEEEeCCc--cccccHHHHHHHHcCCCEEeCCCCCcHHHhcCCCcEEEeCCCCC-
Confidence 88899999987 578899975 789999998 899999999999999999999999999999999999999875 5
Q ss_pred ChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 011954 412 GVTPLANNIVKLATHVERRLTMGKKGYERVKDRFLEHHMSQRIA 455 (474)
Q Consensus 412 ~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~ 455 (474)
+++++++|.++++|++.+++|+++|++++.++|+|+...+++.
T Consensus 364 -~~~la~~I~~ll~~~~~~~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 364 -PNELVSSLSKFIDNEEEYQTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred -HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 8999999999999999999999999999999999999998875
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. |
| >PLN02501 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-34 Score=278.20 Aligned_cols=334 Identities=14% Similarity=0.119 Sum_probs=229.9
Q ss_pred cCEEEEEecCCCC--CChhHHHHHHHHHHHhc-CcEEEEEeCCCCCCchhhhhh--------------cccch-------
Q 011954 74 SKLVLLVSHELSL--SGGPLLLMELAFLLRGV-GAEVVWITNQKPNEPDEVIYS--------------LEHKM------- 129 (474)
Q Consensus 74 ~~kIl~v~~~~~~--gG~~~~~~~l~~~L~~~-G~~V~v~~~~~~~~~~~~~~~--------------~~~~~------- 129 (474)
+.+|.+++...-| .|...--.--|-+|++. |++|+++.+.-....+...+. +...+
T Consensus 322 ~r~~~ivTtAslPWmTGtavnpL~rAayLa~~~~~~VtlviPWl~~~dq~~vy~~~~~F~~p~eQe~~ir~wl~~r~g~~ 401 (794)
T PLN02501 322 KRHVAIVTTASLPWMTGTAVNPLFRAAYLAKSAKQNVTLLVPWLCKSDQELVYPNNLTFSSPEEQESYIRNWLEERIGFK 401 (794)
T ss_pred CCeEEEEEcccCcccccccccHHHHHHHhcccCCceEEEEEecCCccccccccCCCcccCCHHHHHHHHHHHHHHhcCCC
Confidence 3689999987544 67654444445667776 799999986644332221111 11111
Q ss_pred hccceeee------------ehhcHHHHhhhcCCCEEEEcccchhhHH--hHHhhhcccccccceeeeeeccccccchhh
Q 011954 130 LDRGVQVL------------SAKGEKAINTALNADLVVLNTAVAGKWL--DGVLKDKVSQVLPKVLWWIHEMRGHYFKLE 195 (474)
Q Consensus 130 ~~~~~~~~------------~~~~~~~~~~~~~~DiV~~~~~~~~~~~--~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~ 195 (474)
....+.++ +...+...+...+|||||++++....|. ........ . +++..+|.....|....
T Consensus 402 ~~~~i~fYpg~~~~~~~SI~p~gdI~~~L~~f~PDVVHLatP~~LGw~~~Glr~ArKl---~-PVVasyHTny~eYl~~y 477 (794)
T PLN02501 402 ADFKISFYPGKFSKERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKF---N-HVVGVVHTNYLEYIKRE 477 (794)
T ss_pred CCceEEeecchhccCCccccchHHHHHHhhccCCCEEEECCchhhccHHHHHHHHHHc---C-CeEEEEeCCcHHHHhHh
Confidence 01112222 2224556667799999999998776665 22222222 2 68888887654443311
Q ss_pred h----h--------hcccc--cccccccccccHHHHHHhHHHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHH
Q 011954 196 Y----V--------KHLPF--VAGAMIDSYTTAEYWKNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVR 261 (474)
Q Consensus 196 ~----~--------~~~~~--~~~~~~~s~~~~~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r 261 (474)
. . .++.. ++.+++.|..+.+ + +...+.. .||||.++|.+.... ..+
T Consensus 478 ~~g~L~~~llk~l~~~v~r~hcD~VIaPS~atq~---------L--~~~vI~n-VnGVDte~F~P~~r~--------~~~ 537 (794)
T PLN02501 478 KNGALQAFFVKHINNWVTRAYCHKVLRLSAATQD---------L--PKSVICN-VHGVNPKFLKIGEKV--------AEE 537 (794)
T ss_pred cchhHHHHHHHHHHHHHHHhhCCEEEcCCHHHHH---------h--cccceee-cccccccccCCcchh--------HHH
Confidence 1 1 11111 3444554433321 1 1122222 269999999876432 122
Q ss_pred HhcCCCCCCEEEEEecccccCcchHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeE
Q 011954 262 ESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHV 341 (474)
Q Consensus 262 ~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v 341 (474)
.+++++.....++|+||+.+.||++.|++|++.+.+ +.++++|+|+|+|+ ..+++++++.++++ +|
T Consensus 538 r~lgi~~~~kgiLfVGRLa~EKGld~LLeAla~L~~-------~~pnvrLvIVGDGP-----~reeLe~la~eLgL--~V 603 (794)
T PLN02501 538 RELGQQAFSKGAYFLGKMVWAKGYRELIDLLAKHKN-------ELDGFNLDVFGNGE-----DAHEVQRAAKRLDL--NL 603 (794)
T ss_pred HhcCCccccCceEEEEcccccCCHHHHHHHHHHHHh-------hCCCeEEEEEcCCc-----cHHHHHHHHHHcCC--EE
Confidence 456665544567899999999999999999998765 34789999999997 78899999999887 59
Q ss_pred EEecCCCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCcceeeeeCCceeeecCCCCChHHHHHHHH
Q 011954 342 HFVNKTLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIV 421 (474)
Q Consensus 342 ~~~g~~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~ 421 (474)
.|+|..++..++|+.+|+||+||. .|+||++++||||||+|||+++.+|.. ++.++.+|++. +| +++++++|.
T Consensus 604 ~FLG~~dd~~~lyasaDVFVlPS~--sEgFGlVlLEAMA~GlPVVATd~pG~e-~V~~g~nGll~--~D--~EafAeAI~ 676 (794)
T PLN02501 604 NFLKGRDHADDSLHGYKVFINPSI--SDVLCTATAEALAMGKFVVCADHPSNE-FFRSFPNCLTY--KT--SEDFVAKVK 676 (794)
T ss_pred EecCCCCCHHHHHHhCCEEEECCC--cccchHHHHHHHHcCCCEEEecCCCCc-eEeecCCeEec--CC--HHHHHHHHH
Confidence 999999889999999999999999 899999999999999999999999854 46677788865 55 899999999
Q ss_pred HHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 011954 422 KLATHVERRLTMGKKGYERVKDRFLEHHMSQRIALVL 458 (474)
Q Consensus 422 ~ll~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~ 458 (474)
+++++++.+..+.+ ...|||+.+++++++.-
T Consensus 677 ~LLsd~~~rl~~~a------~~~~SWeAaadrLle~~ 707 (794)
T PLN02501 677 EALANEPQPLTPEQ------RYNLSWEAATQRFMEYS 707 (794)
T ss_pred HHHhCchhhhHHHH------HhhCCHHHHHHHHHHhh
Confidence 99998765443322 23699999999998764
|
|
| >TIGR02918 accessory Sec system glycosylation protein GtfA | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-34 Score=285.39 Aligned_cols=273 Identities=17% Similarity=0.251 Sum_probs=209.4
Q ss_pred hcCCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccccc---------hhhh---hhcccccccccccccccHH
Q 011954 148 ALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYF---------KLEY---VKHLPFVAGAMIDSYTTAE 215 (474)
Q Consensus 148 ~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~---------~~~~---~~~~~~~~~~~~~s~~~~~ 215 (474)
..++||+|++.+....+.. +.. . ...+.+.++|..+.... ...+ ......++.+++.+....+
T Consensus 209 ~~~~di~i~dr~~~~~~~~--~~~-~--~~~~~v~~lH~~h~~~~~~~~~~~~~~~~y~~~~~~~~~~D~iI~~S~~~~~ 283 (500)
T TIGR02918 209 LTKKDIIILDRSTGIGQAV--LEN-K--GPAKLGVVVHAEHFSESATNETYILWNNYYEYQFSNADYIDFFITATDIQNQ 283 (500)
T ss_pred CCCCCEEEEcCCcccchHH--Hhc-C--CCceEEEEEChhhhcCccCcchhHHHHHHHHHHHhchhhCCEEEECCHHHHH
Confidence 4689999997654333221 111 1 12577778886431111 0111 1233455667777766666
Q ss_pred HHHHhHHHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHHHHHHHHHH
Q 011954 216 YWKNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYES 295 (474)
Q Consensus 216 ~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l 295 (474)
.+.+.+.. ++....++.+||||++...+.+.. ..++.+|+++||+.+.||++.+++|+.++
T Consensus 284 ~l~~~~~~-~~~~~~ki~viP~g~~~~~~~~~~------------------~r~~~~il~vGrl~~~Kg~~~li~A~~~l 344 (500)
T TIGR02918 284 ILKNQFKK-YYNIEPRIYTIPVGSLDELQYPEQ------------------ERKPFSIITASRLAKEKHIDWLVKAVVKA 344 (500)
T ss_pred HHHHHhhh-hcCCCCcEEEEcCCCcccccCccc------------------ccCCeEEEEEeccccccCHHHHHHHHHHH
Confidence 55544322 334467899999998765443210 13457899999999999999999999998
Q ss_pred HHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCCCChHHHHhcCCEEEEcCCCCCCCCchHH
Q 011954 296 LQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYLASIDVLVQNSQARGECFGRIT 375 (474)
Q Consensus 296 ~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv~v~ps~~~~E~~~~~~ 375 (474)
.+ +.|+++|+|+|+|+ ..+.++++++++++.++|+|+|+. ++.++|+.||++|+||. .||||+++
T Consensus 345 ~~-------~~p~~~l~i~G~G~-----~~~~l~~~i~~~~l~~~V~f~G~~-~~~~~~~~adv~v~pS~--~Egfgl~~ 409 (500)
T TIGR02918 345 KK-------SVPELTFDIYGEGG-----EKQKLQKIINENQAQDYIHLKGHR-NLSEVYKDYELYLSAST--SEGFGLTL 409 (500)
T ss_pred Hh-------hCCCeEEEEEECch-----hHHHHHHHHHHcCCCCeEEEcCCC-CHHHHHHhCCEEEEcCc--cccccHHH
Confidence 76 45899999999996 678899999999999999999976 89999999999999998 89999999
Q ss_pred HHHHhcCCCEEEcCCC-CcceeeeeCCceeeecCCC--CC----hHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHH
Q 011954 376 IEAMAFQLPVLGTAAG-GTMEIVVNGTTGLLHPTGK--EG----VTPLANNIVKLATHVERRLTMGKKGYERVKDRFLEH 448 (474)
Q Consensus 376 ~EAma~G~PvI~s~~~-g~~e~v~~~~~G~l~~~~d--~~----~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~fs~~ 448 (474)
+||||||+|||+++++ |.+|+|.++.+|+++++++ .| +++||++|.++++ ++.+++|+++|++.++ .|||+
T Consensus 410 lEAma~G~PVI~~dv~~G~~eiI~~g~nG~lv~~~~~~~d~~~~~~~la~~I~~ll~-~~~~~~~~~~a~~~a~-~fs~~ 487 (500)
T TIGR02918 410 MEAVGSGLGMIGFDVNYGNPTFIEDNKNGYLIPIDEEEDDEDQIITALAEKIVEYFN-SNDIDAFHEYSYQIAE-GFLTA 487 (500)
T ss_pred HHHHHhCCCEEEecCCCCCHHHccCCCCEEEEeCCccccchhHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHH-hcCHH
Confidence 9999999999999986 8999999999999998532 12 6789999999994 5679999999999764 59999
Q ss_pred HHHHHHHHHHHHH
Q 011954 449 HMSQRIALVLREV 461 (474)
Q Consensus 449 ~~~~~~~~~~~~~ 461 (474)
.++++|.++++++
T Consensus 488 ~v~~~w~~ll~~~ 500 (500)
T TIGR02918 488 NIIEKWKKLVREV 500 (500)
T ss_pred HHHHHHHHHHhhC
Confidence 9999999998763
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. |
| >KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-33 Score=263.39 Aligned_cols=383 Identities=29% Similarity=0.322 Sum_probs=280.1
Q ss_pred cCEEEEEecCCCCCChhHHHHHHHHHHHh---------cCcEEEEEeCCCCCCchhh------------------hhh--
Q 011954 74 SKLVLLVSHELSLSGGPLLLMELAFLLRG---------VGAEVVWITNQKPNEPDEV------------------IYS-- 124 (474)
Q Consensus 74 ~~kIl~v~~~~~~gG~~~~~~~l~~~L~~---------~G~~V~v~~~~~~~~~~~~------------------~~~-- 124 (474)
.+++++.++....||.++.....+-.+.. .|++|.+++.+......+. .+.
T Consensus 34 ~~~~~~~~~~~~~gg~er~~v~~~~~l~s~~~~lg~~d~G~qV~~l~~h~~al~~~~~~~~~~~~l~~~~~i~vv~~~lP 113 (495)
T KOG0853|consen 34 FEHVTFIHPDLGIGGAERLVVDAAVHLLSGQDVLGLPDTGGQVVYLTSHEDALEMPLLLRCFAETLDGTPPILVVGDWLP 113 (495)
T ss_pred chhheeeccccccCchHHHhHHHHHHHHhcccccCCCCCCceEEEEehhhhhhcchHHHHHHHHHhcCCCceEEEEeecC
Confidence 45699999999999999888888888888 9999999997654431111 011
Q ss_pred ------cccchhccceeeeehhcHHHHhhhcCCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccccchhh---
Q 011954 125 ------LEHKMLDRGVQVLSAKGEKAINTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYFKLE--- 195 (474)
Q Consensus 125 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~--- 195 (474)
+.......+..++............+.|.|++.+..++.++...+.. |...+++++++|.....+.++.
T Consensus 114 ~~~~~~~~~~~~~~~~~il~~~~~~~~k~~~~~d~~i~d~~~~~~~l~~~~~~--p~~~~~i~~~~h~~~~lla~r~g~~ 191 (495)
T KOG0853|consen 114 RAMGQFLEQVAGCAYLRILRIPFGILFKWAEKVDPIIEDFVSACVPLLKQLSG--PDVIIKIYFYCHFPDSLLAKRLGVL 191 (495)
T ss_pred cccchhhhhhhccceeEEEEeccchhhhhhhhhceeecchHHHHHHHHHHhcC--CcccceeEEeccchHHHhccccCcc
Confidence 11122223334443333222222377899999888777777777765 7788999999999876665542
Q ss_pred ---hhhc--------ccccccccccccccHHHHHHhHHHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhc
Q 011954 196 ---YVKH--------LPFVAGAMIDSYTTAEYWKNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESL 264 (474)
Q Consensus 196 ---~~~~--------~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~ 264 (474)
+... ....+..++++..++..++..+. .++..++.+.+.++|.+.+.+..... ..+.+...|...
T Consensus 192 ~~l~~~~l~~~e~e~~~~~~~~~~ns~~~~~~f~~~~~---~L~~~d~~~~y~ei~~s~~~~~~~~~-~~~~~~~~r~~~ 267 (495)
T KOG0853|consen 192 KVLYRHALDKIEEETTGLAWKILVNSYFTKRQFKATFV---SLSNSDITSTYPEIDGSWFTYGQYES-HLELRLPVRLYR 267 (495)
T ss_pred ceeehhhhhhhhhhhhhccceEecchhhhhhhhhhhhh---hcCCCCcceeeccccchhcccccccc-chhcccccceee
Confidence 1111 12344556677777666665533 23445589999999988877532111 111234455666
Q ss_pred CCCCCCEEEEEecccccCcchHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCC-----CCcCchHHHHHHHHHHHcCC-C
Q 011954 265 GVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSD-----MNAQTKFETELRNFVAEKKI-Q 338 (474)
Q Consensus 265 ~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g-----~~~~~~~~~~l~~~~~~~~l-~ 338 (474)
++...+..+..+.++.+.||++++++++..+...+.+. ..++.+++++|+. ..+..++.+++.++++++++ .
T Consensus 268 ~v~~~d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~~--~~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~l~g 345 (495)
T KOG0853|consen 268 GVSGIDRFFPSINRFEPGKDQDLALPAFTLLHDSIPEP--SISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYDLLG 345 (495)
T ss_pred eecccceEeeeeeecCCCCCceeehhhHHhhhcccCCC--CCCceEEEEecCCCccccchhhHHHHHHHHHHHHHhCccC
Confidence 77776888999999999999999999999987765431 3367899999943 23334578899999999998 4
Q ss_pred CeEEEecCCCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCcceeeeeCCceeeecCCCCChHHHHH
Q 011954 339 DHVHFVNKTLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLAN 418 (474)
Q Consensus 339 ~~v~~~g~~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~~e~v~~~~~G~l~~~~d~~~~~la~ 418 (474)
+.+.|+....+...+...+|+.+.-+....|.||++++|||+||+|||+|+.||..|+|.++.+|++++++.+.+..+++
T Consensus 346 ~~v~~~~s~~~~~~yrl~adt~~v~~qPa~E~FGiv~IEAMa~glPvvAt~~GGP~EiV~~~~tG~l~dp~~e~~~~~a~ 425 (495)
T KOG0853|consen 346 QFVWFLPSTTRVAKYRLAADTKGVLYQPANEHFGIVPIEAMACGLPVVATNNGGPAEIVVHGVTGLLIDPGQEAVAELAD 425 (495)
T ss_pred ceEEEecCCchHHHHHHHHhcceEEecCCCCCccceeHHHHhcCCCEEEecCCCceEEEEcCCcceeeCCchHHHHHHHH
Confidence 77788787766666766666644433333799999999999999999999999999999999999999996422236999
Q ss_pred HHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhh
Q 011954 419 NIVKLATHVERRLTMGKKGYERVKDRFLEHHMSQRIALVLREVLQY 464 (474)
Q Consensus 419 ~i~~ll~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~~ 464 (474)
++.++..|++.+.+|+++++++++++|+|..+.+++.++..+.+..
T Consensus 426 ~~~kl~~~p~l~~~~~~~G~~rV~e~fs~~~~~~ri~~~~~~~~~~ 471 (495)
T KOG0853|consen 426 ALLKLRRDPELWARMGKNGLKRVKEMFSWQHYSERIASVLGKYLQW 471 (495)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhHhcCCc
Confidence 9999999999999999999999999999999999999998876543
|
|
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-32 Score=259.59 Aligned_cols=295 Identities=14% Similarity=0.135 Sum_probs=207.1
Q ss_pred HHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhcccchhccceeeeehhcHHHHhhhcCCCEEEEcccchhhHHhHHhh
Q 011954 91 LLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEHKMLDRGVQVLSAKGEKAINTALNADLVVLNTAVAGKWLDGVLK 170 (474)
Q Consensus 91 ~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DiV~~~~~~~~~~~~~~~~ 170 (474)
++-.-+-+.|...|++|+++-...-. +..+.. +++..+.|+.+...+...
T Consensus 14 ~~~~~~~~~l~~~~~~~~~~~~~~~~--------------------------~~~~~~-~~~~~~~~~~~~~~~~~~--- 63 (331)
T PHA01630 14 RQKKLLEEHLKMLGHKVTVFEKPTLT--------------------------KYQLPP-GYPIYIYYTIFNSMLFWK--- 63 (331)
T ss_pred HHHHHHHHHHHHhCCeeEEEeccchh--------------------------hhhcCC-CCceeeehhhhhHHHHHh---
Confidence 56667778999999999998532110 111111 444444555433332222
Q ss_pred hcccccccceeeeeeccccccchhhhhhc--ccccccccccccccHHHHHHhHHHHhcCC-CCCeEEEeCCCCccccchh
Q 011954 171 DKVSQVLPKVLWWIHEMRGHYFKLEYVKH--LPFVAGAMIDSYTTAEYWKNRTRERLGIR-MPETYVVHLGNSKDLMDIA 247 (474)
Q Consensus 171 ~~~~~~~~~~v~~~h~~~~~~~~~~~~~~--~~~~~~~~~~s~~~~~~~~~~~~~~~~~~-~~ki~vi~ngvd~~~~~~~ 247 (474)
.++....++++++|+.. .....+... ...++.+++.|..+.+.+.+ .+++ .+++.|||||+|.+.|.+.
T Consensus 64 -~~~~~~~~~v~e~~~~~--~l~~~~~~~~~~~~ad~ii~~S~~~~~~l~~-----~g~~~~~~i~vIpNGVd~~~f~~~ 135 (331)
T PHA01630 64 -GIPHVGKNIVFEVADTD--AISHTALYFFRNQPVDEIVVPSQWSKNAFYT-----SGLKIPQPIYVIPHNLNPRMFEYK 135 (331)
T ss_pred -hccccCCceEEEEEeec--hhhHHHHHHHhhccCCEEEECCHHHHHHHHH-----cCCCCCCCEEEECCCCCHHHcCCC
Confidence 33445568888888732 222233333 35678888888777666543 3444 4689999999999888654
Q ss_pred hhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHH
Q 011954 248 EDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETE 327 (474)
Q Consensus 248 ~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~ 327 (474)
... ..+.++++++|++.++||++.+++|++++.+ +.++++|+|+|+++ ....
T Consensus 136 ~~~----------------~~~~~vl~~~g~~~~~Kg~d~Li~A~~~l~~-------~~~~~~llivG~~~-----~~~~ 187 (331)
T PHA01630 136 PKE----------------KPHPCVLAILPHSWDRKGGDIVVKIFHELQN-------EGYDFYFLIKSSNM-----LDPR 187 (331)
T ss_pred ccc----------------cCCCEEEEEeccccccCCHHHHHHHHHHHHh-------hCCCEEEEEEeCcc-----cchh
Confidence 211 1345777788899999999999999998865 44799999999764 2221
Q ss_pred HHHHHHHcCCCCeEEEecCCCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCcceeeeeCCceeeec
Q 011954 328 LRNFVAEKKIQDHVHFVNKTLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHP 407 (474)
Q Consensus 328 l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~~e~v~~~~~G~l~~ 407 (474)
+ .++.. +....+.+++..+|+.||++|+||. .|+||++++||||||+|||+|+.||.+|++.++.+|++++
T Consensus 188 l------~~~~~-~~~~v~~~~l~~~y~~aDv~v~pS~--~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~ 258 (331)
T PHA01630 188 L------FGLNG-VKTPLPDDDIYSLFAGCDILFYPVR--GGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIK 258 (331)
T ss_pred h------ccccc-eeccCCHHHHHHHHHhCCEEEECCc--cccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEee
Confidence 1 12222 2112234799999999999999999 8999999999999999999999999999999998887775
Q ss_pred CC-----------------CCChHHHHHHHHHHhhCH--HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 011954 408 TG-----------------KEGVTPLANNIVKLATHV--ERRLTMGKKGYERVKDRFLEHHMSQRIALVLRE 460 (474)
Q Consensus 408 ~~-----------------d~~~~~la~~i~~ll~~~--~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~ 460 (474)
.+ +.|.+++++++.+++.|+ +.++++..++.+.+.++|||++++++++++|++
T Consensus 259 ~~~~~~~~~~~~~~~G~~v~~~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~~ 330 (331)
T PHA01630 259 SGRKPKLWYTNPIHVGYFLDPDIEDAYQKLLEALANWTPEKKKENLEGRAILYRENYSYNAIAKMWEKILEK 330 (331)
T ss_pred ecccccccccCCcccccccCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 32 112788999999988863 445555555566667889999999999999975
|
|
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-33 Score=268.83 Aligned_cols=312 Identities=21% Similarity=0.225 Sum_probs=209.7
Q ss_pred EEEEEecCCC-CCChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhh---------hhhcccchhccceeeee-hhcHHH
Q 011954 76 LVLLVSHELS-LSGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEV---------IYSLEHKMLDRGVQVLS-AKGEKA 144 (474)
Q Consensus 76 kIl~v~~~~~-~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~-~~~~~~ 144 (474)
||+++++++. .||+|+++.+|++.|.+. +|..+........... ...++....... .+.. ......
T Consensus 1 ~i~~~~~~~~~~GG~E~~~~~l~~~l~~~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 77 (351)
T cd03804 1 KVAIVHDWLVNIGGGEKVVEALARLFPDA--DIFTLVDDPDKLPRLLRLKKIRTSFIQKLPFARRRYR-KYLPLMPLAIE 77 (351)
T ss_pred CEEEEEeccccCCCHHHHHHHHHHhCCCC--CEEEEeecCCccchhhcCCceeechhhhchhhHhhHh-hhCchhhHHHH
Confidence 5899998866 599999999999999753 3333222211111000 000000000000 0000 011222
Q ss_pred HhhhcCCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccccc-------------hh------------hhhhc
Q 011954 145 INTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYF-------------KL------------EYVKH 199 (474)
Q Consensus 145 ~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~-------------~~------------~~~~~ 199 (474)
.....++|+||+++......+. .....+.++++|......+ .. ...+.
T Consensus 78 ~~~~~~~D~v~~~~~~~~~~~~-------~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (351)
T cd03804 78 QFDLSGYDLVISSSHAVAKGVI-------TRPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRIWDRRS 150 (351)
T ss_pred hccccCCCEEEEcCcHHhcccc-------CCCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHHHHHHHH
Confidence 3345789999998754333211 1122466677775211000 00 01122
Q ss_pred ccccccccccccccHHHHHHhHHHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEeccc
Q 011954 200 LPFVAGAMIDSYTTAEYWKNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSV 279 (474)
Q Consensus 200 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl 279 (474)
+..++.+++.|..+.+.+.+ .++ .+..+|+||+|.+.+.+.. .....++++|++
T Consensus 151 ~~~~d~ii~~S~~~~~~~~~----~~~---~~~~vi~~~~d~~~~~~~~-------------------~~~~~il~~G~~ 204 (351)
T cd03804 151 AARVDYFIANSRFVARRIKK----YYG---RDATVIYPPVDTDRFTPAE-------------------EKEDYYLSVGRL 204 (351)
T ss_pred hcCCCEEEECCHHHHHHHHH----HhC---CCcEEECCCCCHhhcCcCC-------------------CCCCEEEEEEcC
Confidence 35666667777666665543 333 3468999999988775432 233458899999
Q ss_pred ccCcchHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCC--CChHHHHhcC
Q 011954 280 SRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKT--LTVSPYLASI 357 (474)
Q Consensus 280 ~~~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~--~~~~~~~~~a 357 (474)
.+.||++.+++|+.++ + ++|+|+|+|+ ..+.+++ +..++|+|+|++ +++.++|+.|
T Consensus 205 ~~~K~~~~li~a~~~~-----------~-~~l~ivG~g~-----~~~~l~~-----~~~~~V~~~g~~~~~~~~~~~~~a 262 (351)
T cd03804 205 VPYKRIDLAIEAFNKL-----------G-KRLVVIGDGP-----ELDRLRA-----KAGPNVTFLGRVSDEELRDLYARA 262 (351)
T ss_pred ccccChHHHHHHHHHC-----------C-CcEEEEECCh-----hHHHHHh-----hcCCCEEEecCCCHHHHHHHHHhC
Confidence 9999999999999765 5 8999999986 4555554 445899999987 4599999999
Q ss_pred CEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCcceeeeeCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHH
Q 011954 358 DVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKG 437 (474)
Q Consensus 358 dv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~ 437 (474)
|++++||. |+||++++|||+||+|||+++.||..|++.++.+|++++++| +++++++|..+++|++ .+++++
T Consensus 263 d~~v~ps~---e~~g~~~~Eama~G~Pvi~~~~~~~~e~i~~~~~G~~~~~~~--~~~la~~i~~l~~~~~---~~~~~~ 334 (351)
T cd03804 263 RAFLFPAE---EDFGIVPVEAMASGTPVIAYGKGGALETVIDGVTGILFEEQT--VESLAAAVERFEKNED---FDPQAI 334 (351)
T ss_pred CEEEECCc---CCCCchHHHHHHcCCCEEEeCCCCCcceeeCCCCEEEeCCCC--HHHHHHHHHHHHhCcc---cCHHHH
Confidence 99999994 999999999999999999999999999999999999999988 9999999999999874 233444
Q ss_pred HHHHHHhcCHHHHHHHH
Q 011954 438 YERVKDRFLEHHMSQRI 454 (474)
Q Consensus 438 ~~~~~~~fs~~~~~~~~ 454 (474)
++.+. +|+|+++.+++
T Consensus 335 ~~~~~-~~~~~~~~~~~ 350 (351)
T cd03804 335 RAHAE-RFSESRFREKI 350 (351)
T ss_pred HHHHH-hcCHHHHHHHh
Confidence 44444 49999988765
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. |
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-32 Score=262.37 Aligned_cols=263 Identities=20% Similarity=0.285 Sum_probs=206.5
Q ss_pred cCCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccccch--------h---hhhhcccccccccccccccHHHH
Q 011954 149 LNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYFK--------L---EYVKHLPFVAGAMIDSYTTAEYW 217 (474)
Q Consensus 149 ~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~--------~---~~~~~~~~~~~~~~~s~~~~~~~ 217 (474)
.++|+++++.+....+....... ..+.+.++|+....... . .....+..++.+++.+....+.
T Consensus 98 ~~~diii~~~~~~~~~~~~~~~~-----~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~- 171 (372)
T cd04949 98 TKPDVFILDRPTLDGQALLNMKK-----AAKVVVVLHSNHVSDNNDPVHSLINNFYEYVFENLDKVDGVIVATEQQKQD- 171 (372)
T ss_pred CCCCEEEECCccccchhHHhccC-----CceEEEEEChHHhCCcccccccccchhhHHHHhChhhCCEEEEccHHHHHH-
Confidence 78999999987655541111111 12456777764321111 0 1112234555555555555444
Q ss_pred HHhHHHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHHHHHHHHHHHH
Q 011954 218 KNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQ 297 (474)
Q Consensus 218 ~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~ 297 (474)
+...++.. .++.+||||++.+.+.+... .+.++..++++||+.+.||++.+++++.++.+
T Consensus 172 ---l~~~~~~~-~~v~~ip~g~~~~~~~~~~~----------------~~~~~~~i~~vgrl~~~K~~~~li~a~~~l~~ 231 (372)
T cd04949 172 ---LQKQFGNY-NPIYTIPVGSIDPLKLPAQF----------------KQRKPHKIITVARLAPEKQLDQLIKAFAKVVK 231 (372)
T ss_pred ---HHHHhCCC-CceEEEcccccChhhcccch----------------hhcCCCeEEEEEccCcccCHHHHHHHHHHHHH
Confidence 34445433 44999999999887654310 11455678999999999999999999999876
Q ss_pred HHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCCCChHHHHhcCCEEEEcCCCCCCCCchHHHH
Q 011954 298 LIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYLASIDVLVQNSQARGECFGRITIE 377 (474)
Q Consensus 298 ~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv~v~ps~~~~E~~~~~~~E 377 (474)
+.|+++|+|+|.|+ ....++++++++++.++|.|.|+.+++..+|+.||++|+||. .||||++++|
T Consensus 232 -------~~~~~~l~i~G~g~-----~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~~v~~S~--~Eg~~~~~lE 297 (372)
T cd04949 232 -------QVPDATLDIYGYGD-----EEEKLKELIEELGLEDYVFLKGYTRDLDEVYQKAQLSLLTSQ--SEGFGLSLME 297 (372)
T ss_pred -------hCCCcEEEEEEeCc-----hHHHHHHHHHHcCCcceEEEcCCCCCHHHHHhhhhEEEeccc--ccccChHHHH
Confidence 45899999999986 567788888999999999999999999999999999999999 8999999999
Q ss_pred HHhcCCCEEEcCCC-CcceeeeeCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHH
Q 011954 378 AMAFQLPVLGTAAG-GTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRFLEHHMSQRI 454 (474)
Q Consensus 378 Ama~G~PvI~s~~~-g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~ 454 (474)
||++|+|||+++.+ |..|++.++.+|++++++| +++++++|..+++|++.+++|++++++.+ ++|||+.++++|
T Consensus 298 Ama~G~PvI~~~~~~g~~~~v~~~~~G~lv~~~d--~~~la~~i~~ll~~~~~~~~~~~~a~~~~-~~~s~~~~~~~w 372 (372)
T cd04949 298 ALSHGLPVISYDVNYGPSEIIEDGENGYLVPKGD--IEALAEAIIELLNDPKLLQKFSEAAYENA-ERYSEENVWEKW 372 (372)
T ss_pred HHhCCCCEEEecCCCCcHHHcccCCCceEeCCCc--HHHHHHHHHHHHcCHHHHHHHHHHHHHHH-HHhhHHHHHhcC
Confidence 99999999999988 8899999999999999998 99999999999999999999999999984 669999998865
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra |
| >PHA01633 putative glycosyl transferase group 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-31 Score=245.84 Aligned_cols=241 Identities=19% Similarity=0.182 Sum_probs=177.0
Q ss_pred cceeeeeeccccccchhhhhhcccccccccccccccHHHHHHhHHHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhH
Q 011954 178 PKVLWWIHEMRGHYFKLEYVKHLPFVAGAMIDSYTTAEYWKNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLR 257 (474)
Q Consensus 178 ~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~ 257 (474)
.+++.++|+... ...+.+.+.+-+.++++|..+.+.+. ..|++.+ .+|+||+|.+.|.+.... .
T Consensus 71 ~~~~tt~~g~~~---~~~y~~~m~~~~~vIavS~~t~~~L~-----~~G~~~~--i~I~~GVD~~~f~p~~~~------~ 134 (335)
T PHA01633 71 KYFYTTCDGIPN---IEIVNKYLLQDVKFIPNSKFSAENLQ-----EVGLQVD--LPVFHGINFKIVENAEKL------V 134 (335)
T ss_pred CceEEeeCCcCc---hHHHHHHHhcCCEEEeCCHHHHHHHH-----HhCCCCc--eeeeCCCChhhcCccchh------h
Confidence 467888887643 13444455555566777777666544 2466544 358899999988764321 2
Q ss_pred HHHHHhcCCC-CCCEEEEEecccccCcchHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcC
Q 011954 258 EHVRESLGVR-DDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKK 336 (474)
Q Consensus 258 ~~~r~~~~~~-~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~ 336 (474)
.+++++++.. ++.++++++||+.++||++.+++|++++.+...+. ..+++++++|.+ ..++++
T Consensus 135 ~~~r~~~~~~~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~---~~~i~l~ivG~~-------------~~~~l~ 198 (335)
T PHA01633 135 PQLKQKLDKDFPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDI---AKKIHFFVISHK-------------QFTQLE 198 (335)
T ss_pred HHHHHHhCcCCCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCc---cccEEEEEEcHH-------------HHHHcC
Confidence 3456666643 46688999999999999999999999987622100 014688888742 124567
Q ss_pred CCCeEEEec---C--CCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCcceeeee------------
Q 011954 337 IQDHVHFVN---K--TLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVN------------ 399 (474)
Q Consensus 337 l~~~v~~~g---~--~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~~e~v~~------------ 399 (474)
+.++|+|+| + .+++.++|+.||++|+||. .||||++++|||+||+|||+++.||++|++.+
T Consensus 199 l~~~V~f~g~~G~~~~~dl~~~y~~aDifV~PS~--~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~ 276 (335)
T PHA01633 199 VPANVHFVAEFGHNSREYIFAFYGAMDFTIVPSG--TEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVE 276 (335)
T ss_pred CCCcEEEEecCCCCCHHHHHHHHHhCCEEEECCc--cccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHH
Confidence 788999995 3 3679999999999999999 89999999999999999999999999997542
Q ss_pred ------CCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Q 011954 400 ------GTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRFLEHHMSQRIAL 456 (474)
Q Consensus 400 ------~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~ 456 (474)
+..|+.++..| +++|+++|.++++..+ ...++.++++.+++ |+|++++++|++
T Consensus 277 ~~~~~~~g~g~~~~~~d--~~~la~ai~~~~~~~~-~~~~~~~~~~~a~~-f~~~~~~~~~~~ 335 (335)
T PHA01633 277 EYYDKEHGQKWKIHKFQ--IEDMANAIILAFELQD-REERSMKLKELAKK-YDIRNLYTRFLE 335 (335)
T ss_pred HhcCcccCceeeecCCC--HHHHHHHHHHHHhccC-hhhhhHHHHHHHHh-cCHHHHHHHhhC
Confidence 12466777777 9999999999966322 33336677776655 999999999864
|
|
| >PLN02275 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.98 E-value=9.4e-31 Score=253.02 Aligned_cols=307 Identities=13% Similarity=0.068 Sum_probs=203.6
Q ss_pred EEEEEecCCCCCChhHHHHHHHHHHHhcCc-EEEEEeCCCCCCchhhhhhcccchhccceeeeehh------------c-
Q 011954 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGA-EVVWITNQKPNEPDEVIYSLEHKMLDRGVQVLSAK------------G- 141 (474)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~-~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~- 141 (474)
++.++. .+..|++..+..++..|.++|+ +|++++........+. ....++.+...+ .
T Consensus 6 ~~~~~~--~~~~g~~~r~~~~~~~l~~~~~~~v~vi~~~~~~~~~~~-------~~~~~v~v~r~~~~~~~~~~~~~~~~ 76 (371)
T PLN02275 6 RAAVVV--LGDFGRSPRMQYHALSLARQASFQVDVVAYGGSEPIPAL-------LNHPSIHIHLMVQPRLLQRLPRVLYA 76 (371)
T ss_pred EEEEEE--ecCCCCCHHHHHHHHHHHhcCCceEEEEEecCCCCCHHH-------hcCCcEEEEECCCcccccccccchHH
Confidence 444444 2456777889999999988775 8999996443221111 111112221110 0
Q ss_pred ---H-----------HH-HhhhcCCCEEEEcccchhh--HHhHHhhhcccccccceeeeeeccccccc------hh---h
Q 011954 142 ---E-----------KA-INTALNADLVVLNTAVAGK--WLDGVLKDKVSQVLPKVLWWIHEMRGHYF------KL---E 195 (474)
Q Consensus 142 ---~-----------~~-~~~~~~~DiV~~~~~~~~~--~~~~~~~~~~~~~~~~~v~~~h~~~~~~~------~~---~ 195 (474)
. +. ..+..+||+||+|++.... +........ ...|++.++|+...... .. .
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~DvV~~~~~~~~~~~~~~~~~~~~---~~~p~v~~~h~~~~~~~~~~~~~~~~~~~ 153 (371)
T PLN02275 77 LALLLKVAIQFLMLLWFLCVKIPRPDVFLVQNPPSVPTLAVVKLACWL---RRAKFVIDWHNFGYTLLALSLGRSHPLVR 153 (371)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCCCEEEEeCCCCcHHHHHHHHHHHH---hCCCEEEEcCCccHHHHhcccCCCCHHHH
Confidence 0 00 1345799999998754321 122222211 13578888897531110 00 0
Q ss_pred -----hhhcccccccccccccccHHHHHHhHHHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCC
Q 011954 196 -----YVKHLPFVAGAMIDSYTTAEYWKNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDD 270 (474)
Q Consensus 196 -----~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 270 (474)
....++..+.+++.|..+.+.+ .+.++++ +.+||||. .+.|.+.... ..+. +++.
T Consensus 154 ~~~~~e~~~~~~ad~ii~~S~~~~~~l----~~~~g~~---i~vi~n~~-~~~f~~~~~~-----------~~~~-~~~~ 213 (371)
T PLN02275 154 LYRWYERHYGKMADGHLCVTKAMQHEL----DQNWGIR---ATVLYDQP-PEFFRPASLE-----------IRLR-PNRP 213 (371)
T ss_pred HHHHHHHHHHhhCCEEEECCHHHHHHH----HHhcCCC---eEEECCCC-HHHcCcCCch-----------hccc-CCCc
Confidence 1122345566666666655554 3345553 88999995 4656543211 0011 1344
Q ss_pred EEEEEecccccCcchHHHHHHHHHHHHHHHHhc----------cCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCe
Q 011954 271 LLFAIINSVSRGKGQDLFLHSFYESLQLIREKK----------LQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDH 340 (474)
Q Consensus 271 ~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~----------~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~ 340 (474)
.+++++||+.+.||++.+++|+..+...+...+ ..+|+++|+|+|+|+ ..++++++++++++++
T Consensus 214 ~~i~~~grl~~~k~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~i~l~ivG~G~-----~~~~l~~~~~~~~l~~- 287 (371)
T PLN02275 214 ALVVSSTSWTPDEDFGILLEAAVMYDRRVAARLNESDSASGKQSLYPRLLFIITGKGP-----QKAMYEEKISRLNLRH- 287 (371)
T ss_pred EEEEEeCceeccCCHHHHHHHHHHHHhhhhhccccccccccccccCCCeEEEEEeCCC-----CHHHHHHHHHHcCCCc-
Confidence 678899999999999999999988754322110 024789999999997 7889999999999976
Q ss_pred EEEec-C--CCChHHHHhcCCEEEEcCCC-CCCCCchHHHHHHhcCCCEEEcCCCCcceeeeeCCceeeecCCCCChHHH
Q 011954 341 VHFVN-K--TLTVSPYLASIDVLVQNSQA-RGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPL 416 (474)
Q Consensus 341 v~~~g-~--~~~~~~~~~~adv~v~ps~~-~~E~~~~~~~EAma~G~PvI~s~~~g~~e~v~~~~~G~l~~~~d~~~~~l 416 (474)
++|.+ + .+++..+|+.||++|+|+.. ..|++|++++||||||+|||+++.||.+|++.++.+|++++ | +++|
T Consensus 288 v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~gg~~eiv~~g~~G~lv~--~--~~~l 363 (371)
T PLN02275 288 VAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIGELVKDGKNGLLFS--S--SSEL 363 (371)
T ss_pred eEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHCCCCEEEecCCChHHHccCCCCeEEEC--C--HHHH
Confidence 87765 4 48999999999999986321 15899999999999999999999999999999999999997 4 8999
Q ss_pred HHHHHHHh
Q 011954 417 ANNIVKLA 424 (474)
Q Consensus 417 a~~i~~ll 424 (474)
+++|.+++
T Consensus 364 a~~i~~l~ 371 (371)
T PLN02275 364 ADQLLELL 371 (371)
T ss_pred HHHHHHhC
Confidence 99998874
|
|
| >COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.9e-29 Score=240.23 Aligned_cols=371 Identities=19% Similarity=0.151 Sum_probs=261.9
Q ss_pred CEEEEEecCCCC----CChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhccc------------------chh-c
Q 011954 75 KLVLLVSHELSL----SGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEH------------------KML-D 131 (474)
Q Consensus 75 ~kIl~v~~~~~~----gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~------------------~~~-~ 131 (474)
|||++++.+..| ||..-++..|.++|.+.|++|.|+.+..+.........+.. ... .
T Consensus 1 M~Il~v~~E~~p~vK~GGLaDv~~alpk~L~~~g~~v~v~lP~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (487)
T COG0297 1 MKILFVASEIFPFVKTGGLADVVGALPKALAKRGVDVRVLLPSYPKVQKEWRDLLKVVGKFGVLKGGRAQLFIVKEYGKD 80 (487)
T ss_pred CcceeeeeeecCccccCcHHHHHHHhHHHHHhcCCeEEEEcCCchhhhhhhccccceeeEeeeeecccceEEEEEeeccc
Confidence 789999988555 88889999999999999999999998766322111110000 000 0
Q ss_pred cceee--eeh----h--------------cHHH-------Hh-hh---cCCCEEEEcccchhhHHhHHhhhcccccccce
Q 011954 132 RGVQV--LSA----K--------------GEKA-------IN-TA---LNADLVVLNTAVAGKWLDGVLKDKVSQVLPKV 180 (474)
Q Consensus 132 ~~~~~--~~~----~--------------~~~~-------~~-~~---~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (474)
.++.+ +.. . ++.. .. .- ..|||||+|+..+++....+..........+.
T Consensus 81 ~~v~~~lid~~~~f~r~~~~~~~~~d~~~Rf~~F~~a~~~~~~~~~~~~~pDIvH~hDWqt~L~~~~lk~~~~~~~~i~t 160 (487)
T COG0297 81 GGVDLYLIDNPALFKRPDSTLYGYYDNAERFAFFSLAAAELAPLGLISWLPDIVHAHDWQTGLLPAYLKQRYRSGYIIPT 160 (487)
T ss_pred CCCcEEEecChhhcCccccccCCCCcHHHHHHHHHHHHHHHhhhcCCCCCCCEEEeecHHHHHHHHHHhhcccccccCCe
Confidence 00111 100 0 0000 01 11 36999999987766654443332212234689
Q ss_pred eeeeeccccccch--------------------------hhhhhcccccccccccccccHHHHHHh-----HHHHhcCCC
Q 011954 181 LWWIHEMRGHYFK--------------------------LEYVKHLPFVAGAMIDSYTTAEYWKNR-----TRERLGIRM 229 (474)
Q Consensus 181 v~~~h~~~~~~~~--------------------------~~~~~~~~~~~~~~~~s~~~~~~~~~~-----~~~~~~~~~ 229 (474)
++|+|+..-.... ...+..+..++.+.++|.+.++..... +...+....
T Consensus 161 VfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~~ad~vttVSptYa~Ei~t~~~g~gl~g~l~~~~ 240 (487)
T COG0297 161 VFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLEFYGQISFLKGGLYYADAVTTVSPTYAGEIYTPEYGEGLEGLLSWRS 240 (487)
T ss_pred EEEEeeceeecccchhhHHHhcCCHHHhhhceeeecCcchhhhhhheeccEEEEECHHHHHhhccccccccchhhhhhcc
Confidence 9999975311110 011122345566666666665554411 001111223
Q ss_pred CCeEEEeCCCCccccchhhhhH-----------HHHHhHHHHHHhcCCCC--CCEEEEEecccccCcchHHHHHHHHHHH
Q 011954 230 PETYVVHLGNSKDLMDIAEDSV-----------ARRVLREHVRESLGVRD--DDLLFAIINSVSRGKGQDLFLHSFYESL 296 (474)
Q Consensus 230 ~ki~vi~ngvd~~~~~~~~~~~-----------~~~~~~~~~r~~~~~~~--~~~~i~~vgrl~~~Kg~~~ll~a~~~l~ 296 (474)
.+++-|.||+|.+.+.|..+.. .+...+..+++++|++. +.+.+.++||+..+||+|++++++..+.
T Consensus 241 ~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~~L~~~~gL~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l 320 (487)
T COG0297 241 GKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKVALQERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELL 320 (487)
T ss_pred ccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHHHHHHHhCCCCCCCCcEEEEeeccccccchhHHHHHHHHHH
Confidence 7789999999999998765531 25566788999999984 5589999999999999999999999998
Q ss_pred HHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCCCC-hHHHHhcCCEEEEcCCCCCCCCchHH
Q 011954 297 QLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLT-VSPYLASIDVLVQNSQARGECFGRIT 375 (474)
Q Consensus 297 ~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~-~~~~~~~adv~v~ps~~~~E~~~~~~ 375 (474)
+ ..+++++.|.| ++.+++.+..+++.+.. .-....|+.+. ...+|+.+|++++||+ .|+||++-
T Consensus 321 ~---------~~~~~vilG~g---d~~le~~~~~la~~~~~-~~~~~i~~~~~la~~i~agaD~~lmPSr--fEPcGL~q 385 (487)
T COG0297 321 E---------QGWQLVLLGTG---DPELEEALRALASRHPG-RVLVVIGYDEPLAHLIYAGADVILMPSR--FEPCGLTQ 385 (487)
T ss_pred H---------hCceEEEEecC---cHHHHHHHHHHHHhcCc-eEEEEeeecHHHHHHHHhcCCEEEeCCc--CcCCcHHH
Confidence 7 45999999998 34588999999998865 23344455544 4678999999999999 89999999
Q ss_pred HHHHhcCCCEEEcCCCCcceeeee--------CCceeeecCCCCChHHHHHHHHHHhh---CHHH-HHHHHHHHHHHHHH
Q 011954 376 IEAMAFQLPVLGTAAGGTMEIVVN--------GTTGLLHPTGKEGVTPLANNIVKLAT---HVER-RLTMGKKGYERVKD 443 (474)
Q Consensus 376 ~EAma~G~PvI~s~~~g~~e~v~~--------~~~G~l~~~~d~~~~~la~~i~~ll~---~~~~-~~~~~~~~~~~~~~ 443 (474)
++||..|+++|+..+||..|.|.+ ..+|+++.+.+ +++++.+|.+.+. +++. ++.+..++.. .
T Consensus 386 l~amryGtvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f~~~~--~~~l~~al~rA~~~y~~~~~~w~~~~~~~m~---~ 460 (487)
T COG0297 386 LYAMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLFLQTN--PDHLANALRRALVLYRAPPLLWRKVQPNAMG---A 460 (487)
T ss_pred HHHHHcCCcceEcccCCccceecCccchhccCceeEEEEecCC--HHHHHHHHHHHHHHhhCCHHHHHHHHHhhcc---c
Confidence 999999999999999999998875 47999999988 9999999988775 4444 7776666655 6
Q ss_pred hcCHHHHHHHHHHHHHHHHhhh
Q 011954 444 RFLEHHMSQRIALVLREVLQYA 465 (474)
Q Consensus 444 ~fs~~~~~~~~~~~~~~~~~~~ 465 (474)
.|+|+..+++|.++|+.++...
T Consensus 461 d~sw~~sa~~y~~lY~~~~~~~ 482 (487)
T COG0297 461 DFSWDLSAKEYVELYKPLLSKP 482 (487)
T ss_pred ccCchhHHHHHHHHHHHHhccc
Confidence 7999999999999999998754
|
|
| >PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.7e-29 Score=240.35 Aligned_cols=323 Identities=15% Similarity=0.103 Sum_probs=221.3
Q ss_pred cCEEEEEecCCCCCChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhcccchhccceeeee---------------
Q 011954 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEHKMLDRGVQVLS--------------- 138 (474)
Q Consensus 74 ~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 138 (474)
||||+++.... ||.+++..+|+++|.++||+|++++......... ....++.+..
T Consensus 1 ~~~i~i~~~g~--gG~~~~~~~la~~L~~~g~ev~vv~~~~~~~~~~--------~~~~g~~~~~~~~~~~~~~~~~~~l 70 (357)
T PRK00726 1 MKKILLAGGGT--GGHVFPALALAEELKKRGWEVLYLGTARGMEARL--------VPKAGIEFHFIPSGGLRRKGSLANL 70 (357)
T ss_pred CcEEEEEcCcc--hHhhhHHHHHHHHHHhCCCEEEEEECCCchhhhc--------cccCCCcEEEEeccCcCCCChHHHH
Confidence 48899887544 6888889999999999999999999654211100 0001111111
Q ss_pred ---------hhcHHHHhhhcCCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccccchhhhhhccccccccccc
Q 011954 139 ---------AKGEKAINTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYFKLEYVKHLPFVAGAMID 209 (474)
Q Consensus 139 ---------~~~~~~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~ 209 (474)
....+++.+..+||+||+|+...... ....... ...|++++.|..... ...+..++..+.+++.
T Consensus 71 ~~~~~~~~~~~~~~~~ik~~~pDvv~~~~~~~~~~-~~~~~~~---~~~p~v~~~~~~~~~---~~~r~~~~~~d~ii~~ 143 (357)
T PRK00726 71 KAPFKLLKGVLQARKILKRFKPDVVVGFGGYVSGP-GGLAARL---LGIPLVIHEQNAVPG---LANKLLARFAKKVATA 143 (357)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCEEEECCCcchhH-HHHHHHH---cCCCEEEEcCCCCcc---HHHHHHHHHhchheEC
Confidence 11224455668999999998544332 2222211 234676665543211 1111122344554443
Q ss_pred ccccHHHHHHhHHHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHHHH
Q 011954 210 SYTTAEYWKNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFL 289 (474)
Q Consensus 210 s~~~~~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~ll 289 (474)
+... . . . .+..++++++||++.+.+.+.. .+++++++++.++++++|+....|++..++
T Consensus 144 ~~~~---~----~-~--~~~~~i~vi~n~v~~~~~~~~~-----------~~~~~~~~~~~~~i~~~gg~~~~~~~~~~l 202 (357)
T PRK00726 144 FPGA---F----P-E--FFKPKAVVTGNPVREEILALAA-----------PPARLAGREGKPTLLVVGGSQGARVLNEAV 202 (357)
T ss_pred chhh---h----h-c--cCCCCEEEECCCCChHhhcccc-----------hhhhccCCCCCeEEEEECCcHhHHHHHHHH
Confidence 3311 1 1 1 4678999999999987654321 123456666778888999888888876555
Q ss_pred -HHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCCCChHHHHhcCCEEEEcCCCCC
Q 011954 290 -HSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYLASIDVLVQNSQARG 368 (474)
Q Consensus 290 -~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv~v~ps~~~~ 368 (474)
+|+.++.+ . + ..++++|+|+ .+.+.+..+ +++. |.+.|+.+++.++|+.||+++.+|
T Consensus 203 ~~a~~~~~~-------~-~-~~~~~~G~g~------~~~~~~~~~-~~~~--v~~~g~~~~~~~~~~~~d~~i~~~---- 260 (357)
T PRK00726 203 PEALALLPE-------A-L-QVIHQTGKGD------LEEVRAAYA-AGIN--AEVVPFIDDMAAAYAAADLVICRA---- 260 (357)
T ss_pred HHHHHHhhh-------C-c-EEEEEcCCCc------HHHHHHHhh-cCCc--EEEeehHhhHHHHHHhCCEEEECC----
Confidence 88877733 1 3 5678899984 355555555 7763 999999999999999999999765
Q ss_pred CCCchHHHHHHhcCCCEEEcCCCCc--------ceeeeeCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHH
Q 011954 369 ECFGRITIEAMAFQLPVLGTAAGGT--------MEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYER 440 (474)
Q Consensus 369 E~~~~~~~EAma~G~PvI~s~~~g~--------~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~ 440 (474)
.+.+++|||++|+|+|++..++. .+.+.+..+|++++++|.++++|+++|.++++|++.+++|+++++++
T Consensus 261 --g~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~ 338 (357)
T PRK00726 261 --GASTVAELAAAGLPAILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLLELLSDPERLEAMAEAARAL 338 (357)
T ss_pred --CHHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHHHHcCHHHHHHHHHHHHhc
Confidence 26899999999999999986532 24566778999998765448999999999999999999999999998
Q ss_pred HHHhcCHHHHHHHHHHHHH
Q 011954 441 VKDRFLEHHMSQRIALVLR 459 (474)
Q Consensus 441 ~~~~fs~~~~~~~~~~~~~ 459 (474)
+ +.++.+.+++.++++.+
T Consensus 339 ~-~~~~~~~~~~~~~~~~~ 356 (357)
T PRK00726 339 G-KPDAAERLADLIEELAR 356 (357)
T ss_pred C-CcCHHHHHHHHHHHHhh
Confidence 6 45999999999888764
|
|
| >PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-27 Score=236.08 Aligned_cols=333 Identities=17% Similarity=0.143 Sum_probs=216.6
Q ss_pred hhHHHHHHHHHHHhcCcEEEEE-eCCCCCCchhhhhhcccchhccce--eeeeh---hcHHHHhhhcCCCEEEEcccchh
Q 011954 89 GPLLLMELAFLLRGVGAEVVWI-TNQKPNEPDEVIYSLEHKMLDRGV--QVLSA---KGEKAINTALNADLVVLNTAVAG 162 (474)
Q Consensus 89 ~~~~~~~l~~~L~~~G~~V~v~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~---~~~~~~~~~~~~DiV~~~~~~~~ 162 (474)
-...+..|++.|.+.++++.++ |...+. ..+... .....++ ...+. .....+.+..+||+||++....
T Consensus 62 e~~~~~~l~~~l~~~~~~~~i~~t~~t~~-~~~~~~----~~~~~~~~~~~~P~d~~~~~~~~l~~~~Pd~v~~~~~~~- 135 (425)
T PRK05749 62 ETRAAIPLIRALRKRYPDLPILVTTMTPT-GSERAQ----ALFGDDVEHRYLPYDLPGAVRRFLRFWRPKLVIIMETEL- 135 (425)
T ss_pred HHHHHHHHHHHHHHhCCCCcEEEeCCCcc-HHHHHH----HhcCCCceEEEecCCcHHHHHHHHHhhCCCEEEEEecch-
Confidence 3488999999999987664432 221111 111111 0111122 22222 2455667789999999874322
Q ss_pred hHHhHHhhhcccccccceeeeeecccccc------chhhhhhcccccccccccccccHHHHHHhHHHHhcCCCCCeEEEe
Q 011954 163 KWLDGVLKDKVSQVLPKVLWWIHEMRGHY------FKLEYVKHLPFVAGAMIDSYTTAEYWKNRTRERLGIRMPETYVVH 236 (474)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~v~~~h~~~~~~------~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ki~vi~ 236 (474)
|...+.... ....|++.+.|.+.... +.......++.++.+++.|....+.+. .+|++.+ +.+++
T Consensus 136 -~~~~l~~~~--~~~ip~vl~~~~~~~~s~~~~~~~~~~~r~~~~~~d~ii~~S~~~~~~l~-----~~g~~~~-i~vi~ 206 (425)
T PRK05749 136 -WPNLIAELK--RRGIPLVLANARLSERSFKRYQKFKRFYRLLFKNIDLVLAQSEEDAERFL-----ALGAKNE-VTVTG 206 (425)
T ss_pred -hHHHHHHHH--HCCCCEEEEeccCChhhHHHHHHHHHHHHHHHHhCCEEEECCHHHHHHHH-----HcCCCCC-cEecc
Confidence 211111111 12245554444322111 111222334556666666666655543 3577666 88998
Q ss_pred CCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHHHHHHHHHHHHHHHHhccCCCcEEEEEEcC
Q 011954 237 LGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGS 316 (474)
Q Consensus 237 ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~ 316 (474)
|+ +.+.+.+... ......+++.++ .++.+++++|+. .|+.+.+++|+.++.+ ++|+++|+|+|+
T Consensus 207 n~-~~d~~~~~~~----~~~~~~~r~~~~--~~~~vil~~~~~--~~~~~~ll~A~~~l~~-------~~~~~~liivG~ 270 (425)
T PRK05749 207 NL-KFDIEVPPEL----AARAATLRRQLA--PNRPVWIAASTH--EGEEELVLDAHRALLK-------QFPNLLLILVPR 270 (425)
T ss_pred cc-cccCCCChhh----HHHHHHHHHHhc--CCCcEEEEeCCC--chHHHHHHHHHHHHHH-------hCCCcEEEEcCC
Confidence 85 3333222111 111355677776 355667778763 6889999999998865 458999999999
Q ss_pred CCCcCchHH-HHHHHHHHHcCCCC-------------eEEEecCCCChHHHHhcCCEEEE-cCCCCCCCCchHHHHHHhc
Q 011954 317 DMNAQTKFE-TELRNFVAEKKIQD-------------HVHFVNKTLTVSPYLASIDVLVQ-NSQARGECFGRITIEAMAF 381 (474)
Q Consensus 317 g~~~~~~~~-~~l~~~~~~~~l~~-------------~v~~~g~~~~~~~~~~~adv~v~-ps~~~~E~~~~~~~EAma~ 381 (474)
|+ .+ ++++++++++|+.. +|.+.+...++..+|+.||++++ +|. .|++|.+++|||+|
T Consensus 271 g~-----~r~~~l~~~~~~~gl~~~~~~~~~~~~~~~~v~l~~~~~el~~~y~~aDi~~v~~S~--~e~~g~~~lEAma~ 343 (425)
T PRK05749 271 HP-----ERFKEVEELLKKAGLSYVRRSQGEPPSADTDVLLGDTMGELGLLYAIADIAFVGGSL--VKRGGHNPLEPAAF 343 (425)
T ss_pred Ch-----hhHHHHHHHHHhCCCcEEEccCCCCCCCCCcEEEEecHHHHHHHHHhCCEEEECCCc--CCCCCCCHHHHHHh
Confidence 86 43 78999999988742 34444445689999999999655 666 79999999999999
Q ss_pred CCCEEEcCC-CCcceeeee-CCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 011954 382 QLPVLGTAA-GGTMEIVVN-GTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRFLEHHMSQRIALVLR 459 (474)
Q Consensus 382 G~PvI~s~~-~g~~e~v~~-~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~ 459 (474)
|+|||+++. ++..|+++. .++|.+++++| +++|+++|.++++|++.+++|+++|++++.++ ....+++.+.+.
T Consensus 344 G~PVI~g~~~~~~~e~~~~~~~~g~~~~~~d--~~~La~~l~~ll~~~~~~~~m~~~a~~~~~~~---~~~~~~~~~~l~ 418 (425)
T PRK05749 344 GVPVISGPHTFNFKEIFERLLQAGAAIQVED--AEDLAKAVTYLLTDPDARQAYGEAGVAFLKQN---QGALQRTLQLLE 418 (425)
T ss_pred CCCEEECCCccCHHHHHHHHHHCCCeEEECC--HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhC---ccHHHHHHHHHH
Confidence 999999875 556666544 24688888888 99999999999999999999999999999775 366677777777
Q ss_pred HHHhh
Q 011954 460 EVLQY 464 (474)
Q Consensus 460 ~~~~~ 464 (474)
+.+++
T Consensus 419 ~~l~~ 423 (425)
T PRK05749 419 PYLPP 423 (425)
T ss_pred Hhccc
Confidence 76653
|
|
| >PRK13609 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-27 Score=232.80 Aligned_cols=337 Identities=12% Similarity=0.072 Sum_probs=224.4
Q ss_pred ccCEEEEEecCCCCCCh-hHHHHHHHHHHHhcCcEEEEEeCCCCCCc---hhhh---h--------hcccchhccceee-
Q 011954 73 KSKLVLLVSHELSLSGG-PLLLMELAFLLRGVGAEVVWITNQKPNEP---DEVI---Y--------SLEHKMLDRGVQV- 136 (474)
Q Consensus 73 ~~~kIl~v~~~~~~gG~-~~~~~~l~~~L~~~G~~V~v~~~~~~~~~---~~~~---~--------~~~~~~~~~~~~~- 136 (474)
++||||+++..+ ||| ...+..++++|.++|++|+++++...... .... | .+...........
T Consensus 3 ~~~rili~t~~~--G~GH~~~a~al~~~l~~~g~~~~~~~d~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~ 80 (380)
T PRK13609 3 KNPKVLILTAHY--GNGHVQVAKTLEQTFRQKGIKDVIVCDLFGESHPVITEITKYLYLKSYTIGKELYRLFYYGVEKIY 80 (380)
T ss_pred CCCeEEEEEcCC--CchHHHHHHHHHHHHHhcCCCcEEEEEhHHhcchHHHHHHHHHHHHHHHHhHHHHHHHHhccCccc
Confidence 578999999766 544 57899999999999999777764432211 0100 0 0000000000000
Q ss_pred ----------eehhcHHHHhhhcCCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccccchhhhhhcccccccc
Q 011954 137 ----------LSAKGEKAINTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYFKLEYVKHLPFVAGA 206 (474)
Q Consensus 137 ----------~~~~~~~~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~ 206 (474)
........+.+..+||+||++.+..... .+.... ....|++..+++... ......+.++.+
T Consensus 81 ~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~~~~~~~~~--~~~~~~--~~~ip~~~~~td~~~-----~~~~~~~~ad~i 151 (380)
T PRK13609 81 DKKIFSWYANFGRKRLKLLLQAEKPDIVINTFPIIAVP--ELKKQT--GISIPTYNVLTDFCL-----HKIWVHREVDRY 151 (380)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhCcCEEEEcChHHHHH--HHHHhc--CCCCCeEEEeCCCCC-----CcccccCCCCEE
Confidence 0013445666778999999987654432 222211 123455544443211 111223466777
Q ss_pred cccccccHHHHHHhHHHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCC-EEEEEecccccCcch
Q 011954 207 MIDSYTTAEYWKNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDD-LLFAIINSVSRGKGQ 285 (474)
Q Consensus 207 ~~~s~~~~~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~i~~vgrl~~~Kg~ 285 (474)
++.+....+.+. .+|++.+++.+++++++..+..+.. +..+++++++++++ +++++.|++...|++
T Consensus 152 ~~~s~~~~~~l~-----~~gi~~~ki~v~G~p~~~~f~~~~~--------~~~~~~~~~l~~~~~~il~~~G~~~~~k~~ 218 (380)
T PRK13609 152 FVATDHVKKVLV-----DIGVPPEQVVETGIPIRSSFELKIN--------PDIIYNKYQLCPNKKILLIMAGAHGVLGNV 218 (380)
T ss_pred EECCHHHHHHHH-----HcCCChhHEEEECcccChHHcCcCC--------HHHHHHHcCCCCCCcEEEEEcCCCCCCcCH
Confidence 776666544443 3588888999988777654322211 23468889997665 566667888888999
Q ss_pred HHHHHHHHHHHHHHHHhccCCCcEEEEEEcC-CCCcCchHHHHHHHHHHHcCCCCeEEEecCCCChHHHHhcCCEEEEcC
Q 011954 286 DLFLHSFYESLQLIREKKLQVPSMHAVVVGS-DMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYLASIDVLVQNS 364 (474)
Q Consensus 286 ~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~-g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv~v~ps 364 (474)
+.+++++.+. ++++++++|+ +. ...+.+++++++++ ++|+|+|+++++.++|+.||++|.
T Consensus 219 ~~li~~l~~~-----------~~~~~viv~G~~~----~~~~~l~~~~~~~~--~~v~~~g~~~~~~~l~~~aD~~v~-- 279 (380)
T PRK13609 219 KELCQSLMSV-----------PDLQVVVVCGKNE----ALKQSLEDLQETNP--DALKVFGYVENIDELFRVTSCMIT-- 279 (380)
T ss_pred HHHHHHHhhC-----------CCcEEEEEeCCCH----HHHHHHHHHHhcCC--CcEEEEechhhHHHHHHhccEEEe--
Confidence 9998887532 6789887754 32 25677888777665 689999999999999999999983
Q ss_pred CCCCCCCchHHHHHHhcCCCEEEcC-CCCcc----eeeeeCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHH
Q 011954 365 QARGECFGRITIEAMAFQLPVLGTA-AGGTM----EIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYE 439 (474)
Q Consensus 365 ~~~~E~~~~~~~EAma~G~PvI~s~-~~g~~----e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~ 439 (474)
++.|++++|||+||+|||+++ .+|.. +++. ++|..+...| +++++++|.++++|++.+++|++++++
T Consensus 280 ----~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~--~~G~~~~~~~--~~~l~~~i~~ll~~~~~~~~m~~~~~~ 351 (380)
T PRK13609 280 ----KPGGITLSEAAALGVPVILYKPVPGQEKENAMYFE--RKGAAVVIRD--DEEVFAKTEALLQDDMKLLQMKEAMKS 351 (380)
T ss_pred ----CCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHH--hCCcEEEECC--HHHHHHHHHHHHCCHHHHHHHHHHHHH
Confidence 345899999999999999986 55531 2332 3455555666 999999999999999999999999987
Q ss_pred HHHHhcCHHHHHHHHHHHHHHH
Q 011954 440 RVKDRFLEHHMSQRIALVLREV 461 (474)
Q Consensus 440 ~~~~~fs~~~~~~~~~~~~~~~ 461 (474)
.... ++++.+++.+++.+...
T Consensus 352 ~~~~-~s~~~i~~~i~~~~~~~ 372 (380)
T PRK13609 352 LYLP-EPADHIVDDILAENHVE 372 (380)
T ss_pred hCCC-chHHHHHHHHHHhhhhh
Confidence 6644 89999999998887654
|
|
| >cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-27 Score=230.36 Aligned_cols=317 Identities=15% Similarity=0.132 Sum_probs=210.3
Q ss_pred EEEEecCCCCCChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhcccchhccceeee-------------------
Q 011954 77 VLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEHKMLDRGVQVL------------------- 137 (474)
Q Consensus 77 Il~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------- 137 (474)
|++.+. ..||..+++.+++++|.++||+|++++............ ..+.-..+...
T Consensus 2 ~~~~~~--~~gG~~~~~~~la~~l~~~G~ev~v~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (350)
T cd03785 2 ILIAGG--GTGGHIFPALALAEELRERGAEVLFLGTKRGLEARLVPK---AGIPLHTIPVGGLRRKGSLKKLKAPFKLLK 76 (350)
T ss_pred EEEEec--CchhhhhHHHHHHHHHHhCCCEEEEEECCCcchhhcccc---cCCceEEEEecCcCCCChHHHHHHHHHHHH
Confidence 555553 336778899999999999999999998654321110000 00000011100
Q ss_pred ehhcHHHHhhhcCCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccccchhhhhhcccccccccccccccHHHH
Q 011954 138 SAKGEKAINTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYFKLEYVKHLPFVAGAMIDSYTTAEYW 217 (474)
Q Consensus 138 ~~~~~~~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~ 217 (474)
......++.+..+||+||+|+...+........ . ...|++.+.|..... ..........+.+++.+....++
T Consensus 77 ~~~~~~~~i~~~~pDvI~~~~~~~~~~~~~~a~-~---~~~p~v~~~~~~~~~---~~~~~~~~~~~~vi~~s~~~~~~- 148 (350)
T cd03785 77 GVLQARKILKKFKPDVVVGFGGYVSGPVGLAAK-L---LGIPLVIHEQNAVPG---LANRLLARFADRVALSFPETAKY- 148 (350)
T ss_pred HHHHHHHHHHhcCCCEEEECCCCcchHHHHHHH-H---hCCCEEEEcCCCCcc---HHHHHHHHhhCEEEEcchhhhhc-
Confidence 011233445668999999997554432222111 1 123555544432211 11111123345555544433322
Q ss_pred HHhHHHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHH-HHHHHHHHH
Q 011954 218 KNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDL-FLHSFYESL 296 (474)
Q Consensus 218 ~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~-ll~a~~~l~ 296 (474)
++..++.+|+||+|.+.+.+.. . ++++++++++++++++|+....|+.+. +++++..+.
T Consensus 149 ---------~~~~~~~~i~n~v~~~~~~~~~----------~-~~~~~~~~~~~~i~~~~g~~~~~~~~~~l~~a~~~l~ 208 (350)
T cd03785 149 ---------FPKDKAVVTGNPVREEILALDR----------E-RARLGLRPGKPTLLVFGGSQGARAINEAVPEALAELL 208 (350)
T ss_pred ---------CCCCcEEEECCCCchHHhhhhh----------h-HHhcCCCCCCeEEEEECCcHhHHHHHHHHHHHHHHhh
Confidence 3567899999999988765321 1 667788888888888887777777654 457777663
Q ss_pred HHHHHhccCCCcEE-EEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCCCChHHHHhcCCEEEEcCCCCCCCCchHH
Q 011954 297 QLIREKKLQVPSMH-AVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYLASIDVLVQNSQARGECFGRIT 375 (474)
Q Consensus 297 ~~~~~~~~~~~~~~-l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv~v~ps~~~~E~~~~~~ 375 (474)
+ ++++ ++++|+| ..+++++.++++ .++|+|.|+.+++.++|+.||++|.+|- ++++
T Consensus 209 ~---------~~~~~~~i~G~g------~~~~l~~~~~~~--~~~v~~~g~~~~~~~~l~~ad~~v~~sg------~~t~ 265 (350)
T cd03785 209 R---------KRLQVIHQTGKG------DLEEVKKAYEEL--GVNYEVFPFIDDMAAAYAAADLVISRAG------ASTV 265 (350)
T ss_pred c---------cCeEEEEEcCCc------cHHHHHHHHhcc--CCCeEEeehhhhHHHHHHhcCEEEECCC------HhHH
Confidence 2 4566 4577887 356777777776 4689999999999999999999997551 6899
Q ss_pred HHHHhcCCCEEEcCCCC--------cceeeeeCCceeeecCC--CCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhc
Q 011954 376 IEAMAFQLPVLGTAAGG--------TMEIVVNGTTGLLHPTG--KEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRF 445 (474)
Q Consensus 376 ~EAma~G~PvI~s~~~g--------~~e~v~~~~~G~l~~~~--d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~f 445 (474)
+|||++|+|||+++.++ ..+.+.+..+|++++++ | +++++++|..+++|++.+++|++++++++. .+
T Consensus 266 ~Eam~~G~Pvv~~~~~~~~~~~~~~~~~~l~~~g~g~~v~~~~~~--~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~-~~ 342 (350)
T cd03785 266 AELAALGLPAILIPLPYAADDHQTANARALVKAGAAVLIPQEELT--PERLAAALLELLSDPERLKAMAEAARSLAR-PD 342 (350)
T ss_pred HHHHHhCCCEEEeecCCCCCCcHHHhHHHHHhCCCEEEEecCCCC--HHHHHHHHHHHhcCHHHHHHHHHHHHhcCC-CC
Confidence 99999999999987654 23556667799999986 6 999999999999999999999999998775 36
Q ss_pred CHHHHHH
Q 011954 446 LEHHMSQ 452 (474)
Q Consensus 446 s~~~~~~ 452 (474)
..+++++
T Consensus 343 ~~~~i~~ 349 (350)
T cd03785 343 AAERIAD 349 (350)
T ss_pred HHHHHHh
Confidence 6666553
|
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Probab=99.96 E-value=8e-28 Score=237.28 Aligned_cols=292 Identities=15% Similarity=0.085 Sum_probs=196.2
Q ss_pred cCCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccccch-------hhhhhcccccccccccccccHHHHHHhH
Q 011954 149 LNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYFK-------LEYVKHLPFVAGAMIDSYTTAEYWKNRT 221 (474)
Q Consensus 149 ~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~-------~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 221 (474)
...|+|++|+...... ..+++...+ ..+++++.|...+.... ....+.+-.++.+...+....+.+....
T Consensus 130 ~~~d~iwihDyhl~ll-p~~lr~~~~--~~~i~~f~HipfP~~e~~~~lp~~~~ll~~~l~~D~igF~t~~~~~~Fl~~~ 206 (460)
T cd03788 130 RPGDLVWVHDYHLLLL-PQMLRERGP--DARIGFFLHIPFPSSEIFRCLPWREELLRGLLGADLIGFQTERYARNFLSCC 206 (460)
T ss_pred CCCCEEEEeChhhhHH-HHHHHhhCC--CCeEEEEEeCCCCChHHHhhCCChHHHHHHHhcCCEEEECCHHHHHHHHHHH
Confidence 4679999999754433 333443332 24788888854322211 0111222222332222222222222222
Q ss_pred HHHhcC------------CCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHHHH
Q 011954 222 RERLGI------------RMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFL 289 (474)
Q Consensus 222 ~~~~~~------------~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~ll 289 (474)
...++. ...++.++|||||.+.|.+..... ..++.+++..+...++++|+++||+.+.||++.++
T Consensus 207 ~~~l~~~~~~~~~i~~~g~~~~i~vip~GID~~~f~~~~~~~---~~~~~~~~~~~~~~~~~~il~vgRl~~~Kgi~~ll 283 (460)
T cd03788 207 SRLLGLEVTDDGGVEYGGRRVRVGAFPIGIDPDAFRKLAASP---EVQERAAELRERLGGRKLIVGVDRLDYSKGIPERL 283 (460)
T ss_pred HHHcCCcccCCceEEECCEEEEEEEEeCeEcHHHHHHHhcCc---hhHHHHHHHHHhcCCCEEEEEecCccccCCHHHHH
Confidence 222221 224689999999999987653221 11223334444556788999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCc----hHHHHHHHHHHHcCCC------CeEEEe-cC--CCChHHHHhc
Q 011954 290 HSFYESLQLIREKKLQVPSMHAVVVGSDMNAQT----KFETELRNFVAEKKIQ------DHVHFV-NK--TLTVSPYLAS 356 (474)
Q Consensus 290 ~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~----~~~~~l~~~~~~~~l~------~~v~~~-g~--~~~~~~~~~~ 356 (474)
+|++++.+...+. ..+++|+++|.+...+. ++.+++++++.+++.. ..|+++ |+ .+++..+|+.
T Consensus 284 ~A~~~ll~~~p~~---~~~v~Lv~vg~~~~g~~~~~~~l~~~l~~~v~~in~~~g~~~~~~v~~~~g~v~~~el~~~y~~ 360 (460)
T cd03788 284 LAFERLLERYPEW---RGKVVLVQIAVPSRTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLPREELAALYRA 360 (460)
T ss_pred HHHHHHHHhChhh---cCCEEEEEEccCCCcCcHHHHHHHHHHHHHHHHHHhccCCCCceeEEEEeCCCCHHHHHHHHHh
Confidence 9999887632110 01367898876532221 2344555555444321 235554 54 4899999999
Q ss_pred CCEEEEcCCCCCCCCchHHHHHHhcCCC----EEEcCCCCcceeeeeCCceeeecCCCCChHHHHHHHHHHhh-CHHHHH
Q 011954 357 IDVLVQNSQARGECFGRITIEAMAFQLP----VLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLAT-HVERRL 431 (474)
Q Consensus 357 adv~v~ps~~~~E~~~~~~~EAma~G~P----vI~s~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~-~~~~~~ 431 (474)
||++|+||. .||||++++|||+||+| ||+|+.+|..+. +.+|+++++.| +++++++|.++++ +++.++
T Consensus 361 aDv~v~pS~--~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~---~~~g~lv~p~d--~~~la~ai~~~l~~~~~e~~ 433 (460)
T cd03788 361 ADVALVTPL--RDGMNLVAKEYVACQDDDPGVLILSEFAGAAEE---LSGALLVNPYD--IDEVADAIHRALTMPLEERR 433 (460)
T ss_pred ccEEEeCcc--ccccCcccceeEEEecCCCceEEEeccccchhh---cCCCEEECCCC--HHHHHHHHHHHHcCCHHHHH
Confidence 999999999 89999999999999999 999998888776 46899999999 9999999999998 557888
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHH
Q 011954 432 TMGKKGYERVKDRFLEHHMSQRIALV 457 (474)
Q Consensus 432 ~~~~~~~~~~~~~fs~~~~~~~~~~~ 457 (474)
.+++++++++.+ |+++.+++++++-
T Consensus 434 ~~~~~~~~~v~~-~~~~~w~~~~l~~ 458 (460)
T cd03788 434 ERHRKLREYVRT-HDVQAWANSFLDD 458 (460)
T ss_pred HHHHHHHHHHHh-CCHHHHHHHHHHh
Confidence 889999998855 9999999998754
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. |
| >cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.2e-27 Score=229.37 Aligned_cols=303 Identities=16% Similarity=0.129 Sum_probs=197.2
Q ss_pred cCCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccccc--hh---hh-------------------h-----hc
Q 011954 149 LNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYF--KL---EY-------------------V-----KH 199 (474)
Q Consensus 149 ~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~--~~---~~-------------------~-----~~ 199 (474)
.++|++|+|...++..+..+... . ...++|.|.|....... .. .+ + ..
T Consensus 147 ~~~dViH~HeWm~g~a~~~lK~~-~--~~VptVfTtHAT~~GR~l~~g~~~~y~~l~~~~~d~eA~~~~I~~r~~iE~~a 223 (590)
T cd03793 147 EPAVVAHFHEWQAGVGLPLLRKR-K--VDVSTIFTTHATLLGRYLCAGNVDFYNNLDYFDVDKEAGKRGIYHRYCIERAA 223 (590)
T ss_pred CCCeEEEEcchhHhHHHHHHHHh-C--CCCCEEEEecccccccccccCCcccchhhhhcchhhhhhcccchHHHHHHHHH
Confidence 67999999987766554443332 2 23489999997542221 00 00 0 11
Q ss_pred ccccccccccccccHHHHHHhHHHHhcCCCCCeEEEeCCCCccccchhhhhH---------HHHHhHHHHHHhcCCCCCC
Q 011954 200 LPFVAGAMIDSYTTAEYWKNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSV---------ARRVLREHVRESLGVRDDD 270 (474)
Q Consensus 200 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~---------~~~~~~~~~r~~~~~~~~~ 270 (474)
...++.++ ++++..+......|+.++++ |||||+|.+.|....+.. ..+..+..++..++++.++
T Consensus 224 a~~Ad~ft----tVS~it~~E~~~Ll~~~pd~--ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f~~~~~~~~~~~~~d~ 297 (590)
T cd03793 224 AHCAHVFT----TVSEITAYEAEHLLKRKPDV--VLPNGLNVKKFSALHEFQNLHAQSKEKINEFVRGHFYGHYDFDLDK 297 (590)
T ss_pred HhhCCEEE----ECChHHHHHHHHHhCCCCCE--EeCCCcchhhcccchhhhhhhHHhhhhhhHHHHHHHhhhcCCCCCC
Confidence 12233344 44455555556677888776 999999999987654221 0112234467778887777
Q ss_pred EEEEE-eccccc-CcchHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcC-------chHH----------------
Q 011954 271 LLFAI-INSVSR-GKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQ-------TKFE---------------- 325 (474)
Q Consensus 271 ~~i~~-vgrl~~-~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~-------~~~~---------------- 325 (474)
.++++ +||++. +||+|.+|+|+.++-..++..+.+..=+-|+|+-.+...- ....
T Consensus 298 tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~~~~~~i~~~i~~ 377 (590)
T cd03793 298 TLYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLKGQAVRKQLRDTVNSVKEKIGK 377 (590)
T ss_pred eEEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhhcchHHHHHHHHHHHHHHHHhhh
Confidence 77666 799998 9999999999999988777644222223444443331100 0001
Q ss_pred ---------------------------------------------------HHHHHHHHHcCCC----Ce--EEEecC--
Q 011954 326 ---------------------------------------------------TELRNFVAEKKIQ----DH--VHFVNK-- 346 (474)
Q Consensus 326 ---------------------------------------------------~~l~~~~~~~~l~----~~--v~~~g~-- 346 (474)
+.+-..++++++. ++ |+|++.
T Consensus 378 ~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~drVkvif~P~~L 457 (590)
T cd03793 378 RLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPEDRVKVVFHPEFL 457 (590)
T ss_pred hhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCCCeEEEEEccccc
Confidence 1111222222232 22 555551
Q ss_pred -------CCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCc----ceeeeeC-CceeeecCCC----
Q 011954 347 -------TLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGT----MEIVVNG-TTGLLHPTGK---- 410 (474)
Q Consensus 347 -------~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~----~e~v~~~-~~G~l~~~~d---- 410 (474)
-.+..++|+.||++|+||. +||||++++||||||+|||+|+.+|. .|++.++ ..|+++.+.+
T Consensus 458 ~~~~~~~g~~y~E~~~g~dl~v~PS~--yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~E~v~~~~~~gi~V~~r~~~~~ 535 (590)
T cd03793 458 SSTNPLLGLDYEEFVRGCHLGVFPSY--YEPWGYTPAECTVMGIPSITTNLSGFGCFMEEHIEDPESYGIYIVDRRFKSP 535 (590)
T ss_pred CCCCCcCCcchHHHhhhceEEEeccc--cCCCCcHHHHHHHcCCCEEEccCcchhhhhHHHhccCCCceEEEecCCccch
Confidence 1457889999999999999 89999999999999999999999988 5666544 3577775322
Q ss_pred -CChHHHHHHHHHHhhCHHHHHHHHHHHH-HHHHHhcCHHHHHHHHHHHHHHHHh
Q 011954 411 -EGVTPLANNIVKLATHVERRLTMGKKGY-ERVKDRFLEHHMSQRIALVLREVLQ 463 (474)
Q Consensus 411 -~~~~~la~~i~~ll~~~~~~~~~~~~~~-~~~~~~fs~~~~~~~~~~~~~~~~~ 463 (474)
+++++|+++|.++++. +.++++.++++ +...+.|+|+++++.|.+.|..++.
T Consensus 536 ~e~v~~La~~m~~~~~~-~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~~Al~ 589 (590)
T cd03793 536 DESVQQLTQYMYEFCQL-SRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQLALS 589 (590)
T ss_pred HHHHHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhh
Confidence 1288999999998854 56666666544 3445679999999999999998875
|
GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity. |
| >TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-27 Score=231.69 Aligned_cols=289 Identities=17% Similarity=0.155 Sum_probs=199.7
Q ss_pred cCCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccccc-------hhhhhhcccccccccccccccHHHHHHhH
Q 011954 149 LNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYF-------KLEYVKHLPFVAGAMIDSYTTAEYWKNRT 221 (474)
Q Consensus 149 ~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~-------~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 221 (474)
..-|+|.+|+..... +..+++...+. .++.+..|...+... .....+.+-.+|-+-..+....+.+....
T Consensus 126 ~~~d~vwvhDYhl~l-~p~~lr~~~~~--~~igfFlHipfP~~e~f~~lp~r~~il~gll~~dligF~t~~~~~~Fl~~~ 202 (456)
T TIGR02400 126 QPGDIVWVHDYHLML-LPAMLRELGVQ--NKIGFFLHIPFPSSEIYRTLPWRRELLEGLLAYDLVGFQTYDDARNFLSAV 202 (456)
T ss_pred CCCCEEEEecchhhH-HHHHHHhhCCC--CeEEEEEeCCCCChHHHhhCCcHHHHHHHHhcCCEEEECCHHHHHHHHHHH
Confidence 345899999865433 34444444433 467777885432211 11122223333333333333333333333
Q ss_pred HHHhcC-----------CCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHHHHH
Q 011954 222 RERLGI-----------RMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLH 290 (474)
Q Consensus 222 ~~~~~~-----------~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~ 290 (474)
.+.++. ...++.++|||||.+.|.+.............+|+++ .++.+|+++||+++.||++.+++
T Consensus 203 ~~~l~~~~~~~~~~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vIl~VgRLd~~KGi~~ll~ 279 (456)
T TIGR02400 203 SRELGLETLPNGVESGGRTVRVGAFPIGIDVDRFAEQAKKPSVQKRIAELRESL---KGRKLIIGVDRLDYSKGLPERLL 279 (456)
T ss_pred HHHhCCcccCCceEECCcEEEEEEecCcCCHHHHHHHhcChhHHHHHHHHHHHc---CCCeEEEEccccccccCHHHHHH
Confidence 333332 3456899999999999976543322222234577776 36678999999999999999999
Q ss_pred HHHHHHHHHHHhccCCCc----EEEEEEcCCCCcCchHHHHHHHHHHHc--------CCCC--eEEEec-C--CCChHHH
Q 011954 291 SFYESLQLIREKKLQVPS----MHAVVVGSDMNAQTKFETELRNFVAEK--------KIQD--HVHFVN-K--TLTVSPY 353 (474)
Q Consensus 291 a~~~l~~~~~~~~~~~~~----~~l~i~G~g~~~~~~~~~~l~~~~~~~--------~l~~--~v~~~g-~--~~~~~~~ 353 (474)
|++++.+ ++|+ +.|+++|.....+.+...++++.++++ +..+ .+++++ . .+++.++
T Consensus 280 A~~~ll~-------~~p~~~~~v~Lv~v~~p~rg~~~~~~~l~~~i~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~al 352 (456)
T TIGR02400 280 AFERFLE-------EHPEWRGKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREELMAL 352 (456)
T ss_pred HHHHHHH-------hCccccCceEEEEEecCCccCchHHHHHHHHHHHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHH
Confidence 9999876 3354 668877642222222455555555543 1111 155554 3 4899999
Q ss_pred HhcCCEEEEcCCCCCCCCchHHHHHHhcCCC----EEEcCCCCcceeeeeCCceeeecCCCCChHHHHHHHHHHhh-CHH
Q 011954 354 LASIDVLVQNSQARGECFGRITIEAMAFQLP----VLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLAT-HVE 428 (474)
Q Consensus 354 ~~~adv~v~ps~~~~E~~~~~~~EAma~G~P----vI~s~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~-~~~ 428 (474)
|+.||++|+||. .||||++++||||||+| +|+|+.+|..+.+. +|+++++.| ++++|++|.++++ +++
T Consensus 353 y~aaDv~vv~S~--~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~~~l~---~gllVnP~d--~~~lA~aI~~aL~~~~~ 425 (456)
T TIGR02400 353 YRAADVGLVTPL--RDGMNLVAKEYVAAQDPKDGVLILSEFAGAAQELN---GALLVNPYD--IDGMADAIARALTMPLE 425 (456)
T ss_pred HHhCcEEEECcc--ccccCccHHHHHHhcCCCCceEEEeCCCCChHHhC---CcEEECCCC--HHHHHHHHHHHHcCCHH
Confidence 999999999999 99999999999999999 99999999888773 799999999 9999999999998 778
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 011954 429 RRLTMGKKGYERVKDRFLEHHMSQRIALVL 458 (474)
Q Consensus 429 ~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~ 458 (474)
.++++.++.++++.+ ||+..+++++++-+
T Consensus 426 er~~r~~~~~~~v~~-~~~~~W~~~~l~~l 454 (456)
T TIGR02400 426 EREERHRAMMDKLRK-NDVQRWREDFLSDL 454 (456)
T ss_pred HHHHHHHHHHHHHhh-CCHHHHHHHHHHHh
Confidence 899999999999876 99999999988654
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib |
| >TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.6e-27 Score=228.29 Aligned_cols=313 Identities=14% Similarity=0.127 Sum_probs=204.3
Q ss_pred CEEEEEecCCCCCChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhcccchhccceeee--e--------------
Q 011954 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEHKMLDRGVQVL--S-------------- 138 (474)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-------------- 138 (474)
|||+++.... ||......+|+++|.++||+|++++........ . . ...++.+. +
T Consensus 1 ~~i~~~~g~~--~g~~~~~~~La~~L~~~g~eV~vv~~~~~~~~~-~----~---~~~g~~~~~i~~~~~~~~~~~~~l~ 70 (348)
T TIGR01133 1 KKVVLAAGGT--GGHIFPALAVAEELIKRGVEVLWLGTKRGLEKR-L----V---PKAGIEFYFIPVGGLRRKGSFRLIK 70 (348)
T ss_pred CeEEEEeCcc--HHHHhHHHHHHHHHHhCCCEEEEEeCCCcchhc-c----c---ccCCCceEEEeccCcCCCChHHHHH
Confidence 5788887543 454455679999999999999999854321100 0 0 00111111 0
Q ss_pred --------hhcHHHHhhhcCCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccccchhhhhhcccccccccccc
Q 011954 139 --------AKGEKAINTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYFKLEYVKHLPFVAGAMIDS 210 (474)
Q Consensus 139 --------~~~~~~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~s 210 (474)
.....++.+..+||+||+|.......... ..... ..|++.+.+... .........+.++.+++.+
T Consensus 71 ~~~~~~~~~~~l~~~i~~~~pDvVi~~~~~~~~~~~~-~~~~~---~~p~v~~~~~~~---~~~~~~~~~~~~d~ii~~~ 143 (348)
T TIGR01133 71 TPLKLLKAVFQARRILKKFKPDAVIGFGGYVSGPAGL-AAKLL---GIPLFHHEQNAV---PGLTNKLLSRFAKKVLISF 143 (348)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccHHHHH-HHHHc---CCCEEEECCCCC---ccHHHHHHHHHhCeeEECc
Confidence 11234456678999999997654333221 11111 234543333211 1111122234556666655
Q ss_pred cccHHHHHHhHHHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHH-HH
Q 011954 211 YTTAEYWKNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDL-FL 289 (474)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~-ll 289 (474)
....+++ +..+|+||++...+.+.. .++.++++++.++++++|+....|++.. ++
T Consensus 144 ~~~~~~~-------------~~~~i~n~v~~~~~~~~~-----------~~~~~~~~~~~~~i~~~gg~~~~~~~~~~l~ 199 (348)
T TIGR01133 144 PGAKDHF-------------EAVLVGNPVRQEIRSLPV-----------PRERFGLREGKPTILVLGGSQGAKILNELVP 199 (348)
T ss_pred hhHhhcC-------------CceEEcCCcCHHHhcccc-----------hhhhcCCCCCCeEEEEECCchhHHHHHHHHH
Confidence 5443332 247999999877654321 1234677778888999998877888654 55
Q ss_pred HHHHHHHHHHHHhccCCCcEEEE-EEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCCCChHHHHhcCCEEEEcCCCCC
Q 011954 290 HSFYESLQLIREKKLQVPSMHAV-VVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYLASIDVLVQNSQARG 368 (474)
Q Consensus 290 ~a~~~l~~~~~~~~~~~~~~~l~-i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv~v~ps~~~~ 368 (474)
++++++.+ .+++++ ++|++ ..+.+++.++++++.+.+.|. .. ++.++|+.||++|.+|
T Consensus 200 ~a~~~l~~---------~~~~~~~~~g~~------~~~~l~~~~~~~~l~~~v~~~-~~-~~~~~l~~ad~~v~~~---- 258 (348)
T TIGR01133 200 KALAKLAE---------KGIQIVHQTGKN------DLEKVKNVYQELGIEAIVTFI-DE-NMAAAYAAADLVISRA---- 258 (348)
T ss_pred HHHHHHhh---------cCcEEEEECCcc------hHHHHHHHHhhCCceEEecCc-cc-CHHHHHHhCCEEEECC----
Confidence 78877643 345554 44544 347888888888876666666 33 8999999999999754
Q ss_pred CCCchHHHHHHhcCCCEEEcCCCCc-------ceeeeeCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHH
Q 011954 369 ECFGRITIEAMAFQLPVLGTAAGGT-------MEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERV 441 (474)
Q Consensus 369 E~~~~~~~EAma~G~PvI~s~~~g~-------~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~ 441 (474)
.|++++|||++|+|+|+++.++. .+++.++.+|++++++|.++++++++|.++++|++.+++|++++++++
T Consensus 259 --g~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~ 336 (348)
T TIGR01133 259 --GASTVAELAAAGVPAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLLDPANLEAMAEAARKLA 336 (348)
T ss_pred --ChhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHcCHHHHHHHHHHHHhcC
Confidence 27899999999999999987642 357778889999987643489999999999999999999999998876
Q ss_pred HHhcCHHHHHH
Q 011954 442 KDRFLEHHMSQ 452 (474)
Q Consensus 442 ~~~fs~~~~~~ 452 (474)
.+ +..+++++
T Consensus 337 ~~-~~~~~i~~ 346 (348)
T TIGR01133 337 KP-DAAKRIAE 346 (348)
T ss_pred Cc-cHHHHHHh
Confidence 54 55555543
|
RL J Bacteriol 1993 Mar;175(6):1841-3 |
| >PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.3e-27 Score=204.46 Aligned_cols=169 Identities=29% Similarity=0.505 Sum_probs=153.2
Q ss_pred HHHHHHhcCCCCCCEEEEEecccccCcchHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcC
Q 011954 257 REHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKK 336 (474)
Q Consensus 257 ~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~ 336 (474)
++..+...+.+.++++|+++||+.+.||++.+++++..+.+.. .+++.|+|+|.+. +...++..++.++
T Consensus 2 ~~~~~~~~~~~~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~------~~~~~l~i~G~~~-----~~~~~~~~~~~~~ 70 (172)
T PF00534_consen 2 KDKLREKLKIPDKKKIILFIGRLDPEKGIDLLIEAFKKLKEKK------NPNYKLVIVGDGE-----YKKELKNLIEKLN 70 (172)
T ss_dssp HHHHHHHTTT-TTSEEEEEESESSGGGTHHHHHHHHHHHHHHH------HTTEEEEEESHCC-----HHHHHHHHHHHTT
T ss_pred hHHHHHHcCCCCCCeEEEEEecCccccCHHHHHHHHHHHHhhc------CCCeEEEEEcccc-----ccccccccccccc
Confidence 5677888888899999999999999999999999999986531 2899999999764 7888999999999
Q ss_pred CCCeEEEecCCC--ChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCcceeeeeCCceeeecCCCCChH
Q 011954 337 IQDHVHFVNKTL--TVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVT 414 (474)
Q Consensus 337 l~~~v~~~g~~~--~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~~e~v~~~~~G~l~~~~d~~~~ 414 (474)
+.++++|+|+.. ++..+|+.||++|+||. .|++|++++|||++|+|||+++.|+..|++.++.+|+++++.+ ++
T Consensus 71 ~~~~i~~~~~~~~~~l~~~~~~~di~v~~s~--~e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~~~~g~~~~~~~--~~ 146 (172)
T PF00534_consen 71 LKENIIFLGYVPDDELDELYKSSDIFVSPSR--NEGFGLSLLEAMACGCPVIASDIGGNNEIINDGVNGFLFDPND--IE 146 (172)
T ss_dssp CGTTEEEEESHSHHHHHHHHHHTSEEEE-BS--SBSS-HHHHHHHHTT-EEEEESSTHHHHHSGTTTSEEEESTTS--HH
T ss_pred ccccccccccccccccccccccceecccccc--ccccccccccccccccceeeccccCCceeeccccceEEeCCCC--HH
Confidence 999999999875 99999999999999999 8999999999999999999999999999999999999999998 99
Q ss_pred HHHHHHHHHhhCHHHHHHHHHHHHHH
Q 011954 415 PLANNIVKLATHVERRLTMGKKGYER 440 (474)
Q Consensus 415 ~la~~i~~ll~~~~~~~~~~~~~~~~ 440 (474)
+++++|.+++++++.++.|+++++++
T Consensus 147 ~l~~~i~~~l~~~~~~~~l~~~~~~~ 172 (172)
T PF00534_consen 147 ELADAIEKLLNDPELRQKLGKNARER 172 (172)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCHHHHHHHHHHhcCC
Confidence 99999999999999999999999975
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B .... |
| >PLN02605 monogalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.7e-26 Score=221.18 Aligned_cols=275 Identities=12% Similarity=0.069 Sum_probs=189.5
Q ss_pred HHHHhhhcCCCEEEEcccchhh----HHhHHhhhcccccccceeeeeeccccccchhhhhhcccccccccccccccHHHH
Q 011954 142 EKAINTALNADLVVLNTAVAGK----WLDGVLKDKVSQVLPKVLWWIHEMRGHYFKLEYVKHLPFVAGAMIDSYTTAEYW 217 (474)
Q Consensus 142 ~~~~~~~~~~DiV~~~~~~~~~----~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~ 217 (474)
+.++++..+||+||++.++... .+....... ....|++..+.+.... ......+.++.+++.+....+.+
T Consensus 92 l~~~i~~~~pDvIi~thp~~~~~~~~~l~~~~~~~--~~~~p~~~~~tD~~~~----~~~w~~~~~d~~~~~s~~~~~~l 165 (382)
T PLN02605 92 VAKGLMKYKPDIIVSVHPLMQHVPLRVLRWQGKEL--GKKIPFTTVVTDLGTC----HPTWFHKGVTRCFCPSEEVAKRA 165 (382)
T ss_pred HHHHHHhcCcCEEEEeCcCcccCHHHHHHHHhhcc--CCCCCEEEEECCCCCc----CcccccCCCCEEEECCHHHHHHH
Confidence 3456667899999997766322 222211111 1234666656554211 11222356666666665544433
Q ss_pred HHhHHHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHHHHHHHHHHHH
Q 011954 218 KNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQ 297 (474)
Q Consensus 218 ~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~ 297 (474)
. .+|++.+++.+++++++.+++.+... +..+|+++|++++.++|+++|+....|++..+++++..+..
T Consensus 166 ~-----~~g~~~~ki~v~g~~v~~~f~~~~~~-------~~~~r~~~gl~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~ 233 (382)
T PLN02605 166 L-----KRGLEPSQIRVYGLPIRPSFARAVRP-------KDELRRELGMDEDLPAVLLMGGGEGMGPLEETARALGDSLY 233 (382)
T ss_pred H-----HcCCCHHHEEEECcccCHhhccCCCC-------HHHHHHHcCCCCCCcEEEEECCCcccccHHHHHHHHHHhhc
Confidence 2 45888899999999998776543221 45689999999888999999999999999999999876431
Q ss_pred HHHHhccCCCcEE-EEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCCCChHHHHhcCCEEEEcCCCCCCCCchHHH
Q 011954 298 LIREKKLQVPSMH-AVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYLASIDVLVQNSQARGECFGRITI 376 (474)
Q Consensus 298 ~~~~~~~~~~~~~-l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv~v~ps~~~~E~~~~~~~ 376 (474)
.... ..++.+ ++++|.+. +..+.+++. ....+|+|+|+++++.++|+.||++|.++ .|++++
T Consensus 234 ~~~~---~~~~~~~~vi~G~~~----~~~~~L~~~----~~~~~v~~~G~~~~~~~l~~aaDv~V~~~------g~~ti~ 296 (382)
T PLN02605 234 DKNL---GKPIGQVVVICGRNK----KLQSKLESR----DWKIPVKVRGFVTNMEEWMGACDCIITKA------GPGTIA 296 (382)
T ss_pred cccc---cCCCceEEEEECCCH----HHHHHHHhh----cccCCeEEEeccccHHHHHHhCCEEEECC------CcchHH
Confidence 0000 124565 66778662 234444443 22357999999999999999999999654 478999
Q ss_pred HHHhcCCCEEEcCC------CCcceeeeeCCceeeecCCCCChHHHHHHHHHHhhC-HHHHHHHHHHHHHHHHHhcCHHH
Q 011954 377 EAMAFQLPVLGTAA------GGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATH-VERRLTMGKKGYERVKDRFLEHH 449 (474)
Q Consensus 377 EAma~G~PvI~s~~------~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~-~~~~~~~~~~~~~~~~~~fs~~~ 449 (474)
|||+||+|+|+++. |+...++ ++..|++. +| +++++++|.++++| ++.+++|++++++.... .+.+.
T Consensus 297 EAma~g~PvI~~~~~pgqe~gn~~~i~-~~g~g~~~--~~--~~~la~~i~~ll~~~~~~~~~m~~~~~~~~~~-~a~~~ 370 (382)
T PLN02605 297 EALIRGLPIILNGYIPGQEEGNVPYVV-DNGFGAFS--ES--PKEIARIVAEWFGDKSDELEAMSENALKLARP-EAVFD 370 (382)
T ss_pred HHHHcCCCEEEecCCCccchhhHHHHH-hCCceeec--CC--HHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCC-chHHH
Confidence 99999999999984 4444344 45567654 56 99999999999997 99999999999987755 67777
Q ss_pred HHHHHHHH
Q 011954 450 MSQRIALV 457 (474)
Q Consensus 450 ~~~~~~~~ 457 (474)
+++.+.+.
T Consensus 371 i~~~l~~~ 378 (382)
T PLN02605 371 IVHDLHEL 378 (382)
T ss_pred HHHHHHHH
Confidence 77766654
|
|
| >PRK13608 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-25 Score=217.75 Aligned_cols=341 Identities=11% Similarity=0.104 Sum_probs=214.9
Q ss_pred ccCEEEEEecCCCCCCh-hHHHHHHHHHHHhcC---cEEEEEeCC--CCCCchhhhh--------hccc----chhccce
Q 011954 73 KSKLVLLVSHELSLSGG-PLLLMELAFLLRGVG---AEVVWITNQ--KPNEPDEVIY--------SLEH----KMLDRGV 134 (474)
Q Consensus 73 ~~~kIl~v~~~~~~gG~-~~~~~~l~~~L~~~G---~~V~v~~~~--~~~~~~~~~~--------~~~~----~~~~~~~ 134 (474)
++||||+++..+ ||| -+....|.++|.+.| ++|.++-.- ..+....... ..+. .......
T Consensus 4 ~~~~vlil~~~~--G~GH~~aA~al~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~Y~~~~~~~p~~y~~~y~~~~~ 81 (391)
T PRK13608 4 QNKKILIITGSF--GNGHMQVTQSIVNQLNDMNLDHLSVIEHDLFMEAHPILTSICKKWYINSFKYFRNMYKGFYYSRPD 81 (391)
T ss_pred CCceEEEEECCC--CchHHHHHHHHHHHHHhhCCCCceEEEeehHHhcCchHHHHHHHHHHHHHHHhHHHHHHHHHcCch
Confidence 468999999554 555 477889999998876 455544311 1111111000 0000 0000000
Q ss_pred -------eeeehhcHHHHhhhcCCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccccchhhhhhccccccccc
Q 011954 135 -------QVLSAKGEKAINTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYFKLEYVKHLPFVAGAM 207 (474)
Q Consensus 135 -------~~~~~~~~~~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~ 207 (474)
..........+.+..+||+||++.+.+.. ..+.... ....|++....+... ...| ..+.++.++
T Consensus 82 ~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~p~~~~--~~l~~~~--~~~iP~~~v~td~~~---~~~w--~~~~~d~~~ 152 (391)
T PRK13608 82 KLDKCFYKYYGLNKLINLLIKEKPDLILLTFPTPVM--SVLTEQF--NINIPVATVMTDYRL---HKNW--ITPYSTRYY 152 (391)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhCcCEEEECCcHHHH--HHHHHhc--CCCCCEEEEeCCCCc---cccc--ccCCCCEEE
Confidence 00111344566677999999998665432 2222111 123455443333211 1111 224556666
Q ss_pred ccccccHHHHHHhHHHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCC-EEEEEecccccCcchH
Q 011954 208 IDSYTTAEYWKNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDD-LLFAIINSVSRGKGQD 286 (474)
Q Consensus 208 ~~s~~~~~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~i~~vgrl~~~Kg~~ 286 (474)
+.+....+.+. ..|++.+++.+++++++..+..... +..+++++++++++ .++++.|++...||++
T Consensus 153 v~s~~~~~~l~-----~~gi~~~ki~v~GiPv~~~f~~~~~--------~~~~~~~~~l~~~~~~ilv~~G~lg~~k~~~ 219 (391)
T PRK13608 153 VATKETKQDFI-----DVGIDPSTVKVTGIPIDNKFETPID--------QKQWLIDNNLDPDKQTILMSAGAFGVSKGFD 219 (391)
T ss_pred ECCHHHHHHHH-----HcCCCHHHEEEECeecChHhccccc--------HHHHHHHcCCCCCCCEEEEECCCcccchhHH
Confidence 55555444433 3578888999998888755432221 34567788987655 4566789999889999
Q ss_pred HHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCCCChHHHHhcCCEEEEcCCC
Q 011954 287 LFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYLASIDVLVQNSQA 366 (474)
Q Consensus 287 ~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv~v~ps~~ 366 (474)
.+++++.+ ..+++++++++++.. +..++++ +.++..++|+++|+++++.++|+.||++|.
T Consensus 220 ~li~~~~~----------~~~~~~~vvv~G~~~---~l~~~l~---~~~~~~~~v~~~G~~~~~~~~~~~aDl~I~---- 279 (391)
T PRK13608 220 TMITDILA----------KSANAQVVMICGKSK---ELKRSLT---AKFKSNENVLILGYTKHMNEWMASSQLMIT---- 279 (391)
T ss_pred HHHHHHHh----------cCCCceEEEEcCCCH---HHHHHHH---HHhccCCCeEEEeccchHHHHHHhhhEEEe----
Confidence 99998532 226788876644320 1223333 334445689999999999999999999994
Q ss_pred CCCCCchHHHHHHhcCCCEEEcCC-CCc----ceeeeeCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHH
Q 011954 367 RGECFGRITIEAMAFQLPVLGTAA-GGT----MEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERV 441 (474)
Q Consensus 367 ~~E~~~~~~~EAma~G~PvI~s~~-~g~----~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~ 441 (474)
.+.|+++.|||++|+|+|+++. +|. ..++.+...|+. .+| +++++++|.++++|++.+++|++++++..
T Consensus 280 --k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~G~g~~--~~~--~~~l~~~i~~ll~~~~~~~~m~~~~~~~~ 353 (391)
T PRK13608 280 --KPGGITISEGLARCIPMIFLNPAPGQELENALYFEEKGFGKI--ADT--PEEAIKIVASLTNGNEQLTNMISTMEQDK 353 (391)
T ss_pred --CCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhCCcEEE--eCC--HHHHHHHHHHHhcCHHHHHHHHHHHHHhc
Confidence 3468999999999999999964 331 112223344544 345 89999999999999999999999999976
Q ss_pred HHhcCHHHHHHHHHHHHHHHHhh
Q 011954 442 KDRFLEHHMSQRIALVLREVLQY 464 (474)
Q Consensus 442 ~~~fs~~~~~~~~~~~~~~~~~~ 464 (474)
.. |+++.+++.+++++..+.+.
T Consensus 354 ~~-~s~~~i~~~l~~l~~~~~~~ 375 (391)
T PRK13608 354 IK-YATQTICRDLLDLIGHSSQP 375 (391)
T ss_pred CC-CCHHHHHHHHHHHhhhhhhh
Confidence 65 99999999999988766543
|
|
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.1e-25 Score=226.81 Aligned_cols=295 Identities=16% Similarity=0.163 Sum_probs=204.5
Q ss_pred CCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccccc-------hhhhhhcccccccccccccccHHHHHHhHH
Q 011954 150 NADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYF-------KLEYVKHLPFVAGAMIDSYTTAEYWKNRTR 222 (474)
Q Consensus 150 ~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~-------~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 222 (474)
.-|+|.+|+.... .+..+++...+. .++.+..|...+... ...+.+.+-.++-+-..+....+.+.+...
T Consensus 147 ~~d~vWvhDYhL~-llp~~lR~~~~~--~~igfFlHiPFPs~e~fr~lp~r~~il~gll~aDligF~t~~y~r~Fl~~~~ 223 (797)
T PLN03063 147 EGDVVWCHDYHLM-FLPQYLKEYNNK--MKVGWFLHTPFPSSEIYKTLPSRSELLRAVLTADLIGFHTYDFARHFLSACT 223 (797)
T ss_pred CCCEEEEecchhh-hHHHHHHHhCCC--CcEEEEecCCCCCHHHHhhCCCHHHHHHHHhcCCEEEeCCHHHHHHHHHHHH
Confidence 4479999985443 334455555544 477777886533221 111222232333333333333333333333
Q ss_pred HHhcC-----------CCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHHHHHH
Q 011954 223 ERLGI-----------RMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHS 291 (474)
Q Consensus 223 ~~~~~-----------~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a 291 (474)
..++. ...++.++|||||.+.|.+.............+++.++ ++.+|+++||+++.||++.+++|
T Consensus 224 r~l~~~~~~~~i~~~gr~~~I~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~---~~~lIl~VgRLd~~KGi~~lL~A 300 (797)
T PLN03063 224 RILGVEGTHEGVVDQGKVTRVAVFPIGIDPERFINTCELPEVKQHMKELKRFFA---GRKVILGVDRLDMIKGIPQKYLA 300 (797)
T ss_pred HHhCccccCCceEECCeEEEEEEEecccCHHHHHHHhcChhHHHHHHHHHHhcC---CCeEEEEecccccccCHHHHHHH
Confidence 23332 22568999999999988765332211122335566553 56788999999999999999999
Q ss_pred HHHHHHHHHHhccCCCcE----EEEEEcCCCCcCchHHHHHHHHHHHcC--CCC--------eEEEec-C--CCChHHHH
Q 011954 292 FYESLQLIREKKLQVPSM----HAVVVGSDMNAQTKFETELRNFVAEKK--IQD--------HVHFVN-K--TLTVSPYL 354 (474)
Q Consensus 292 ~~~l~~~~~~~~~~~~~~----~l~i~G~g~~~~~~~~~~l~~~~~~~~--l~~--------~v~~~g-~--~~~~~~~~ 354 (474)
++++.+ ++|++ .|+.++.....+.+..+++++.++++. +.. .|++++ . .+++..+|
T Consensus 301 fe~lL~-------~~P~~~~kvvLvqia~psr~~~~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly 373 (797)
T PLN03063 301 FEKFLE-------ENPEWRDKVMLVQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALY 373 (797)
T ss_pred HHHHHH-------hCccccCcEEEEEEecCCCCchHHHHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHH
Confidence 999876 34554 455444322122235566777776653 222 133343 2 37899999
Q ss_pred hcCCEEEEcCCCCCCCCchHHHHHHhcCCC----EEEcCCCCcceeeeeCCceeeecCCCCChHHHHHHHHHHhh-CHHH
Q 011954 355 ASIDVLVQNSQARGECFGRITIEAMAFQLP----VLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLAT-HVER 429 (474)
Q Consensus 355 ~~adv~v~ps~~~~E~~~~~~~EAma~G~P----vI~s~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~-~~~~ 429 (474)
+.||+||+||. .||+|++++||||||+| +|+|..+|..+.+ +.+|++++|.| ++++|++|.++++ ++++
T Consensus 374 ~~ADvfvvtSl--rEGmnLv~lEamA~g~p~~gvlVlSe~~G~~~~l--~~~allVnP~D--~~~lA~AI~~aL~m~~~e 447 (797)
T PLN03063 374 AITDVMLVTSL--RDGMNLVSYEFVACQKAKKGVLVLSEFAGAGQSL--GAGALLVNPWN--ITEVSSAIKEALNMSDEE 447 (797)
T ss_pred HhCCEEEeCcc--ccccCcchhhHheeecCCCCCEEeeCCcCchhhh--cCCeEEECCCC--HHHHHHHHHHHHhCCHHH
Confidence 99999999999 99999999999999999 9999999998876 66899999999 9999999999999 8888
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhh
Q 011954 430 RLTMGKKGYERVKDRFLEHHMSQRIALVLREVLQY 464 (474)
Q Consensus 430 ~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~~ 464 (474)
++++.+..++++.+ ++|...++.+++.++++..+
T Consensus 448 r~~r~~~~~~~v~~-~~~~~Wa~~fl~~l~~~~~~ 481 (797)
T PLN03063 448 RETRHRHNFQYVKT-HSAQKWADDFMSELNDIIVE 481 (797)
T ss_pred HHHHHHHHHHhhhh-CCHHHHHHHHHHHHHHHhhh
Confidence 88888999998877 99999999999999888654
|
|
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.92 E-value=8e-24 Score=190.89 Aligned_cols=224 Identities=26% Similarity=0.267 Sum_probs=163.2
Q ss_pred EEEEecCCC--CCChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhcccchhccceeeeehhcHHHHhhhcCCCEE
Q 011954 77 VLLVSHELS--LSGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEHKMLDRGVQVLSAKGEKAINTALNADLV 154 (474)
Q Consensus 77 Il~v~~~~~--~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DiV 154 (474)
|+++++... .||.+++...+++.|.++||+|++++ ..........+..+||+|
T Consensus 1 i~~i~~~~~~~~~G~~~~~~~l~~~L~~~g~~v~v~~-------------------------~~~~~~~~~~~~~~~D~i 55 (229)
T cd01635 1 ILLVSTPLLPGGGGVELVLLDLAKALARRGHEVEVVA-------------------------LLLLLLLRILRGFKPDVV 55 (229)
T ss_pred CeeeccccCCCCCCchhHHHHHHHHHHHcCCeEEEEE-------------------------echHHHHHHHhhcCCCEE
Confidence 466666655 47778999999999999999999998 111123334446799999
Q ss_pred EEcccchhhHHhHHhhhcccccccceeeeeeccccccchhhhhhcccccccccccccccHHHHHHhHHHHhcCCCCCeEE
Q 011954 155 VLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYFKLEYVKHLPFVAGAMIDSYTTAEYWKNRTRERLGIRMPETYV 234 (474)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ki~v 234 (474)
|+|+............ .....+++++.|+........... ......
T Consensus 56 ~~~~~~~~~~~~~~~~---~~~~~~~i~~~h~~~~~~~~~~~~-----------------~~~~~~-------------- 101 (229)
T cd01635 56 HAHGYYPAPLALLLAA---RLLGIPLVLTVHGVNRSLLEGVPL-----------------SLLALS-------------- 101 (229)
T ss_pred EEcCCCcHHHHHHHHH---hhCCCCEEEEEcCccHhhcccCcH-----------------HHHHHH--------------
Confidence 9998766554431111 123468889999764332211000 000000
Q ss_pred EeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHHHHHHHHHHHHHHHHhccCCCcEEEEEE
Q 011954 235 VHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVV 314 (474)
Q Consensus 235 i~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~ 314 (474)
. ......++|++.+.||++.+++++.++.+ +.++++++++
T Consensus 102 -------------------------~--------~~~~~~~~g~~~~~k~~~~~~~a~~~l~~-------~~~~~~~~i~ 141 (229)
T cd01635 102 -------------------------I--------GLADKVFVGRLAPEKGLDDLIEAFALLKE-------RGPDLKLVIA 141 (229)
T ss_pred -------------------------H--------hhcceEEEEeecccCCHHHHHHHHHHHHH-------hCCCeEEEEE
Confidence 0 00011189999999999999999999865 3479999999
Q ss_pred cCCCCcCchHHHHHHHHHHHcCCCCeEEEecCC---CChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCC
Q 011954 315 GSDMNAQTKFETELRNFVAEKKIQDHVHFVNKT---LTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAG 391 (474)
Q Consensus 315 G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~---~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~ 391 (474)
|.+. .....+..+.+++..++|.++|+. +++..+++.||++++||. .|++|++++|||++|+|+|+|+.+
T Consensus 142 G~~~-----~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~di~l~~~~--~e~~~~~~~Eam~~g~pvi~s~~~ 214 (229)
T cd01635 142 GDGP-----EREYLEELLAALLLLDRVIFLGGLDPEELLALLLAAADVFVLPSL--REGFGLVVLEAMACGLPVIATDVG 214 (229)
T ss_pred eCCC-----ChHHHHHHHHhcCCcccEEEeCCCCcHHHHHHHhhcCCEEEeccc--ccCcChHHHHHHhCCCCEEEcCCC
Confidence 9985 445555556777888999999983 556667777999999999 899999999999999999999999
Q ss_pred CcceeeeeCCceeee
Q 011954 392 GTMEIVVNGTTGLLH 406 (474)
Q Consensus 392 g~~e~v~~~~~G~l~ 406 (474)
+..|++.++++|+++
T Consensus 215 ~~~e~i~~~~~g~~~ 229 (229)
T cd01635 215 GPPEIVEDGLTGLLV 229 (229)
T ss_pred CcceEEECCCceEEC
Confidence 999999899999875
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.6e-23 Score=218.02 Aligned_cols=294 Identities=16% Similarity=0.165 Sum_probs=195.3
Q ss_pred cCCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccccch-------hhhhhcccccccccccccccHHHHHHhH
Q 011954 149 LNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYFK-------LEYVKHLPFVAGAMIDSYTTAEYWKNRT 221 (474)
Q Consensus 149 ~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~-------~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 221 (474)
..-|+|.+|+...... ..+++...+. .++.+..|-..+.... ....+.+-.+|-+-..+....+.+....
T Consensus 132 ~~~d~vwvhDYhl~l~-p~~lr~~~~~--~~igfFlH~pfP~~~~f~~lp~~~~ll~~ll~~Dligf~t~~~~r~Fl~~~ 208 (726)
T PRK14501 132 RPGDVVWVHDYQLMLL-PAMLRERLPD--ARIGFFLHIPFPSFEVFRLLPWREEILEGLLGADLIGFHTYDYVRHFLSSV 208 (726)
T ss_pred CCCCEEEEeCchhhhH-HHHHHhhCCC--CcEEEEeeCCCCChHHHhhCCChHHHHHHHhcCCeEEeCCHHHHHHHHHHH
Confidence 3458999998654433 3444444433 4677777764332211 1112222222222222222233333333
Q ss_pred HHHhcC-----------CCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHHHHH
Q 011954 222 RERLGI-----------RMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLH 290 (474)
Q Consensus 222 ~~~~~~-----------~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~ 290 (474)
.+.++. ...++.++|||||.+.|.+...........+++|+.+ .++.+|+++||+++.||++.+++
T Consensus 209 ~~~l~~~~~~~~~~~~gr~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~~il~VgRl~~~Kgi~~~l~ 285 (726)
T PRK14501 209 LRVLGYETELGEIRLGGRIVRVDAFPMGIDYDKFHNSAQDPEVQEEIRRLRQDL---RGRKIILSIDRLDYTKGIPRRLL 285 (726)
T ss_pred HHHcCCccCCCeEEECCEEEEEEEEECeEcHHHHHHHhcCchHHHHHHHHHHHc---CCCEEEEEecCcccccCHHHHHH
Confidence 333321 1235899999999999987643222122234456554 46678999999999999999999
Q ss_pred HHHHHHHHHHHhccCCCc----EEEEEEcCCCCcC----chHHHHHHHHHHHcC-------CCCeEEEecC--CCChHHH
Q 011954 291 SFYESLQLIREKKLQVPS----MHAVVVGSDMNAQ----TKFETELRNFVAEKK-------IQDHVHFVNK--TLTVSPY 353 (474)
Q Consensus 291 a~~~l~~~~~~~~~~~~~----~~l~i~G~g~~~~----~~~~~~l~~~~~~~~-------l~~~v~~~g~--~~~~~~~ 353 (474)
|+.++.+ ++|+ ++|+++|.+.... .++..++.+++.+.+ ..+.+.|.|+ .+++..+
T Consensus 286 A~~~ll~-------~~p~~~~~v~lv~v~~~sr~~~~~~~~l~~~~~~~v~~in~~~~~~~~~pv~~~~~~~~~~~l~~l 358 (726)
T PRK14501 286 AFERFLE-------KNPEWRGKVRLVQVAVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYRSLPFEELVAL 358 (726)
T ss_pred HHHHHHH-------hCccccCCEEEEEEecCCCcchHHHHHHHHHHHHHHHHHHhhcCCCCcceEEEEeCCCCHHHHHHH
Confidence 9999876 3354 7899887432221 123344444443322 1123456664 4899999
Q ss_pred HhcCCEEEEcCCCCCCCCchHHHHHHhcC-----CCEEEcCCCCcceeeeeCCceeeecCCCCChHHHHHHHHHHhhC-H
Q 011954 354 LASIDVLVQNSQARGECFGRITIEAMAFQ-----LPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATH-V 427 (474)
Q Consensus 354 ~~~adv~v~ps~~~~E~~~~~~~EAma~G-----~PvI~s~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~-~ 427 (474)
|+.||++|+||. .||||++++|||||| .||++...|+..+++ .|++++|.| +++++++|.+++++ +
T Consensus 359 y~~aDv~v~~S~--~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~~l~----~~llv~P~d--~~~la~ai~~~l~~~~ 430 (726)
T PRK14501 359 YRAADVALVTPL--RDGMNLVAKEYVASRTDGDGVLILSEMAGAAAELA----EALLVNPND--IEGIAAAIKRALEMPE 430 (726)
T ss_pred HHhccEEEeccc--ccccCcccceEEEEcCCCCceEEEecccchhHHhC----cCeEECCCC--HHHHHHHHHHHHcCCH
Confidence 999999999999 999999999999994 567777778888875 489999999 99999999999984 4
Q ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhh
Q 011954 428 ERRLTMGKKGYERVKDRFLEHHMSQRIALVLREVLQY 464 (474)
Q Consensus 428 ~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~~ 464 (474)
+.+.+..+++++++. +|||+.+++++++.|+++..+
T Consensus 431 ~e~~~r~~~~~~~v~-~~~~~~w~~~~l~~l~~~~~~ 466 (726)
T PRK14501 431 EEQRERMQAMQERLR-RYDVHKWASDFLDELREAAEK 466 (726)
T ss_pred HHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHHhh
Confidence 455555677888875 599999999999999998654
|
|
| >cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.9e-23 Score=202.35 Aligned_cols=332 Identities=12% Similarity=0.007 Sum_probs=196.7
Q ss_pred EEEEecCCCCCChhHHHHHHHHHHHhcCcEEEEEeCCCC-CCchhhhhhcccchh---ccce-------eeeehh-----
Q 011954 77 VLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWITNQKP-NEPDEVIYSLEHKML---DRGV-------QVLSAK----- 140 (474)
Q Consensus 77 Il~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~-~~~~~~~~~~~~~~~---~~~~-------~~~~~~----- 140 (474)
++++......++....-..++..|.+.||.|.++..... ............... .... ...+..
T Consensus 6 ~~~~~~~~~w~~~~~~~qhl~~~~a~~~~~vl~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (373)
T cd04950 6 DILVFSADDWDFLWQRPQHLAARLAERGNRVLYVEPPGLSRTPQPRGRDWVRVVLRLRAALRRPRRLDPLIPARRRRLLR 85 (373)
T ss_pred eEEEecccCcCCCCCCHHHHHHHHHhCCCeEEEEeCCCccCCCCCCCcccEEeeecccccccCccccCccccchhhhHHH
Confidence 334433334455556677888889889999999986542 111110000000000 0000 000000
Q ss_pred -cH--HHHh----hhcCCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccccch--h----hhhhccccccccc
Q 011954 141 -GE--KAIN----TALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYFK--L----EYVKHLPFVAGAM 207 (474)
Q Consensus 141 -~~--~~~~----~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~--~----~~~~~~~~~~~~~ 207 (474)
.+ .... ...+..+++.+.+....+... . ...++++++++....... . .....++.++.++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~i~~~~~P~~~~~~~~-----~--~~~~~Vyd~~D~~~~~~~~~~~~~~~e~~~~~~ad~vi 158 (373)
T cd04950 86 LLLNALLFWAQLELGFGRPILWYYTPYTLPVAAL-----L--QASLVVYDCVDDLSAFPGGPPELLEAERRLLKRADLVF 158 (373)
T ss_pred HHHHHHHHHHHHhcCCCCcEEEEeCccHHHHHhh-----c--CCCeEEEEcccchhccCCCCHHHHHHHHHHHHhCCEEE
Confidence 00 0111 134555666666655544333 1 225778888775432221 1 1233445666666
Q ss_pred ccccccHHHHHHhHHHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHH
Q 011954 208 IDSYTTAEYWKNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDL 287 (474)
Q Consensus 208 ~~s~~~~~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~ 287 (474)
+.|....+.+.. ++ .++.+|+||+|.+.|.+...... ..+.. ...++++++|+|++.+.++++.
T Consensus 159 ~~S~~l~~~~~~-----~~---~~i~~i~ngvd~~~f~~~~~~~~------~~~~~--~~~~~~~i~y~G~l~~~~d~~l 222 (373)
T cd04950 159 TTSPSLYEAKRR-----LN---PNVVLVPNGVDYEHFAAARDPPP------PPADL--AALPRPVIGYYGAIAEWLDLEL 222 (373)
T ss_pred ECCHHHHHHHhh-----CC---CCEEEcccccCHHHhhcccccCC------ChhHH--hcCCCCEEEEEeccccccCHHH
Confidence 666555544332 23 68999999999998875432110 00111 1245689999999999888776
Q ss_pred HHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCC--CChHHHHhcCCEEEEcCC
Q 011954 288 FLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKT--LTVSPYLASIDVLVQNSQ 365 (474)
Q Consensus 288 ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~--~~~~~~~~~adv~v~ps~ 365 (474)
+.++++ ..|+++|+|+|++... ..... +...+||+|+|++ +++..+|+.+|++++|+.
T Consensus 223 l~~la~-----------~~p~~~~vliG~~~~~-----~~~~~----~~~~~nV~~~G~~~~~~l~~~l~~~Dv~l~P~~ 282 (373)
T cd04950 223 LEALAK-----------ARPDWSFVLIGPVDVS-----IDPSA----LLRLPNVHYLGPKPYKELPAYLAGFDVAILPFR 282 (373)
T ss_pred HHHHHH-----------HCCCCEEEEECCCcCc-----cChhH----hccCCCEEEeCCCCHHHHHHHHHhCCEEecCCc
Confidence 655443 2389999999997211 11111 1113689999976 889999999999999986
Q ss_pred C---CCCCCchHHHHHHhcCCCEEEcCCCCcceeeeeCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Q 011954 366 A---RGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVK 442 (474)
Q Consensus 366 ~---~~E~~~~~~~EAma~G~PvI~s~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~ 442 (474)
. ..+++|++++||||||+|||+|+.+++.+ ....+++. .+| +++++++|.+++.++..... +.+++ +.
T Consensus 283 ~~~~~~~~~P~Kl~EylA~G~PVVat~~~~~~~---~~~~~~~~-~~d--~~~~~~ai~~~l~~~~~~~~--~~~~~-~~ 353 (373)
T cd04950 283 LNELTRATSPLKLFEYLAAGKPVVATPLPEVRR---YEDEVVLI-ADD--PEEFVAAIEKALLEDGPARE--RRRLR-LA 353 (373)
T ss_pred cchhhhcCCcchHHHHhccCCCEEecCcHHHHh---hcCcEEEe-CCC--HHHHHHHHHHHHhcCCchHH--HHHHH-HH
Confidence 2 13478999999999999999998765544 33334444 456 99999999997653321111 12222 45
Q ss_pred HhcCHHHHHHHHHHHHHH
Q 011954 443 DRFLEHHMSQRIALVLRE 460 (474)
Q Consensus 443 ~~fs~~~~~~~~~~~~~~ 460 (474)
+.|||+..++++++.+.+
T Consensus 354 ~~~sW~~~a~~~~~~l~~ 371 (373)
T cd04950 354 AQNSWDARAAEMLEALQE 371 (373)
T ss_pred HHCCHHHHHHHHHHHHHh
Confidence 669999999999966544
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.3e-22 Score=174.09 Aligned_cols=355 Identities=17% Similarity=0.191 Sum_probs=235.7
Q ss_pred cCEEEEEecCCCC-CChhHHHHHHHHHHHhcCc--EEEEEeCCCCCCchhh----hhhcccchhccceeeeehhcH----
Q 011954 74 SKLVLLVSHELSL-SGGPLLLMELAFLLRGVGA--EVVWITNQKPNEPDEV----IYSLEHKMLDRGVQVLSAKGE---- 142 (474)
Q Consensus 74 ~~kIl~v~~~~~~-gG~~~~~~~l~~~L~~~G~--~V~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~---- 142 (474)
.+.|.|++|+-+. ||||+++..-.+.+++.-- ...|.+.+.+...... ...+.-.+...++.++..+..
T Consensus 43 ~ktvgfFHPYCNAGGGGErVLW~Avr~~q~k~~n~~~viYsGD~n~t~~~IL~k~k~~F~idlDs~nI~Fi~Lk~R~lVe 122 (465)
T KOG1387|consen 43 VKTVGFFHPYCNAGGGGERVLWKAVRITQRKFPNNVIVIYSGDFNVTPENILNKVKNKFDIDLDSDNIFFIYLKLRYLVE 122 (465)
T ss_pred ceEEEEecccccCCCCcceehhHHHHHHHHhCCCceEEEEeCCCCCCHHHHHHHHHHhcCceecccceEEEEEEeeeeee
Confidence 4569999999777 5668999999999887543 3334443323222222 222233344445555433210
Q ss_pred --------------------HHHhhhcCCCEEEEcccchhhHHhHHhhhcccccccceeeeeecccc--ccch-------
Q 011954 143 --------------------KAINTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRG--HYFK------- 193 (474)
Q Consensus 143 --------------------~~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~--~~~~------- 193 (474)
...+-+..|||.+-.-..+..+ .+++. + ...|++.++|-... ..++
T Consensus 123 a~~~~hfTllgQaigsmIl~~Eai~r~~Pdi~IDtMGY~fs~--p~~r~-l--~~~~V~aYvHYP~iS~DML~~l~qrq~ 197 (465)
T KOG1387|consen 123 ASTWKHFTLLGQAIGSMILAFEAIIRFPPDIFIDTMGYPFSY--PIFRR-L--RRIPVVAYVHYPTISTDMLKKLFQRQK 197 (465)
T ss_pred cccccceehHHHHHHHHHHHHHHHHhCCchheEecCCCcchh--HHHHH-H--ccCceEEEEecccccHHHHHHHHhhhh
Confidence 0112237899887654333221 12221 1 13578888884211 0000
Q ss_pred --------hhhhhcc--------cccccccccccccHHHHHHhHHHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhH
Q 011954 194 --------LEYVKHL--------PFVAGAMIDSYTTAEYWKNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLR 257 (474)
Q Consensus 194 --------~~~~~~~--------~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~ 257 (474)
..+++.+ ..++..++++..+.+. +....+. .++.+|+++.+++..+.
T Consensus 198 s~~l~~~KlaY~rlFa~lY~~~G~~ad~vm~NssWT~nH----I~qiW~~--~~~~iVyPPC~~e~lks----------- 260 (465)
T KOG1387|consen 198 SGILVWGKLAYWRLFALLYQSAGSKADIVMTNSSWTNNH----IKQIWQS--NTCSIVYPPCSTEDLKS----------- 260 (465)
T ss_pred cchhhhHHHHHHHHHHHHHHhccccceEEEecchhhHHH----HHHHhhc--cceeEEcCCCCHHHHHH-----------
Confidence 1111111 2233344444444333 3333443 56889999998874332
Q ss_pred HHHHHhcCC-CCCCEEEEEecccccCcchHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCC-CcCchHHHHHHHHHHHc
Q 011954 258 EHVRESLGV-RDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDM-NAQTKFETELRNFVAEK 335 (474)
Q Consensus 258 ~~~r~~~~~-~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~-~~~~~~~~~l~~~~~~~ 335 (474)
..+- ..+...++++|.+.|.|++. +++.++-...+.+... ..++++|+++|+-- +++.+.-+.++++++++
T Consensus 261 -----~~~te~~r~~~ll~l~Q~RPEKnH~-~Lql~Al~~~~~pl~a-~~~~iKL~ivGScRneeD~ervk~Lkd~a~~L 333 (465)
T KOG1387|consen 261 -----KFGTEGERENQLLSLAQFRPEKNHK-ILQLFALYLKNEPLEA-SVSPIKLIIVGSCRNEEDEERVKSLKDLAEEL 333 (465)
T ss_pred -----HhcccCCcceEEEEEeecCcccccH-HHHHHHHHHhcCchhh-ccCCceEEEEeccCChhhHHHHHHHHHHHHhc
Confidence 2222 24568899999999999999 5554443333221110 33679999999843 33445677899999999
Q ss_pred CCCCeEEEecCC--CChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCc-ceeeee---CCceeeecCC
Q 011954 336 KIQDHVHFVNKT--LTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGT-MEIVVN---GTTGLLHPTG 409 (474)
Q Consensus 336 ~l~~~v~~~g~~--~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~-~e~v~~---~~~G~l~~~~ 409 (474)
+++++|.|.-+. +++..+|+.|.+-|+.-. .|.||+.+.|+||+|+-+|+.+.||. -++|.+ ..+|++.+.
T Consensus 334 ~i~~~v~F~~N~Py~~lv~lL~~a~iGvh~Mw--NEHFGIsVVEyMAAGlIpi~h~SgGP~lDIV~~~~G~~tGFla~t- 410 (465)
T KOG1387|consen 334 KIPKHVQFEKNVPYEKLVELLGKATIGVHTMW--NEHFGISVVEYMAAGLIPIVHNSGGPLLDIVTPWDGETTGFLAPT- 410 (465)
T ss_pred CCccceEEEecCCHHHHHHHhccceeehhhhh--hhhcchhHHHHHhcCceEEEeCCCCCceeeeeccCCccceeecCC-
Confidence 999999998864 899999999999999987 89999999999999999999998887 788764 248999964
Q ss_pred CCChHHHHHHHHHHhh-CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhh
Q 011954 410 KEGVTPLANNIVKLAT-HVERRLTMGKKGYERVKDRFLEHHMSQRIALVLREVLQY 464 (474)
Q Consensus 410 d~~~~~la~~i~~ll~-~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~~ 464 (474)
.++.+++|.+++. |++.+..|+++||..+.+ |+..++.+.+...+.+++.+
T Consensus 411 ---~~EYaE~iLkIv~~~~~~r~~~r~~AR~s~~R-FsE~~F~kd~~~~i~kll~e 462 (465)
T KOG1387|consen 411 ---DEEYAEAILKIVKLNYDERNMMRRNARKSLAR-FGELKFDKDWENPICKLLEE 462 (465)
T ss_pred ---hHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH-hhHHHHHHhHhHHHHHhhcc
Confidence 6899999999998 888899999999987755 99999999999999998865
|
|
| >PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.4e-21 Score=185.46 Aligned_cols=339 Identities=16% Similarity=0.105 Sum_probs=202.1
Q ss_pred cCEEEEEecCCCCCChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhcccchhccceee--------------eeh
Q 011954 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEHKMLDRGVQV--------------LSA 139 (474)
Q Consensus 74 ~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~ 139 (474)
+|||+++.... ||-.+...++++|++.++++.++........... +...+....+.+ ...
T Consensus 1 ~~ki~i~~Ggt---~G~i~~a~l~~~L~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~g~~~~~~~~~~~~~~~ 74 (380)
T PRK00025 1 PLRIAIVAGEV---SGDLLGAGLIRALKARAPNLEFVGVGGPRMQAAG---CESLFDMEELAVMGLVEVLPRLPRLLKIR 74 (380)
T ss_pred CceEEEEecCc---CHHHHHHHHHHHHHhcCCCcEEEEEccHHHHhCC---CccccCHHHhhhccHHHHHHHHHHHHHHH
Confidence 46888877422 3334544599999998888888874322110000 000000011111 111
Q ss_pred hcHHHHhhhcCCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccccchhhhhhcccccccccccccccHHHHHH
Q 011954 140 KGEKAINTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYFKLEYVKHLPFVAGAMIDSYTTAEYWKN 219 (474)
Q Consensus 140 ~~~~~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 219 (474)
...+.+.+..+||+||++.. .+.+...+..... ...|++.+.+.....+......+..+..+.+++.+....+.+.
T Consensus 75 ~~~~~~l~~~kPdivi~~~~-~~~~~~~a~~a~~--~~ip~i~~~~~~~~~~~~~~~~~~~~~~d~i~~~~~~~~~~~~- 150 (380)
T PRK00025 75 RRLKRRLLAEPPDVFIGIDA-PDFNLRLEKKLRK--AGIPTIHYVSPSVWAWRQGRAFKIAKATDHVLALFPFEAAFYD- 150 (380)
T ss_pred HHHHHHHHHcCCCEEEEeCC-CCCCHHHHHHHHH--CCCCEEEEeCCchhhcCchHHHHHHHHHhhheeCCccCHHHHH-
Confidence 23445666789999999863 2222111111111 1246665544321111112222334455666666666555543
Q ss_pred hHHHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEE-EEec-ccccC-cchHHHHHHHHHHH
Q 011954 220 RTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLF-AIIN-SVSRG-KGQDLFLHSFYESL 296 (474)
Q Consensus 220 ~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i-~~vg-rl~~~-Kg~~~ll~a~~~l~ 296 (474)
.+|. ++.++.|++....... . .+..++++++++++.+++ ++.| |.... ++++.+++++..+.
T Consensus 151 ----~~g~---~~~~~G~p~~~~~~~~-~-------~~~~~~~~l~~~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~ 215 (380)
T PRK00025 151 ----KLGV---PVTFVGHPLADAIPLL-P-------DRAAARARLGLDPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQ 215 (380)
T ss_pred ----hcCC---CeEEECcCHHHhcccc-c-------ChHHHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHH
Confidence 2343 2556666553322111 1 134577889987776554 4445 33333 45788899998876
Q ss_pred HHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHc-CCCCeEEEecCCCChHHHHhcCCEEEEcCCCCCCCCchHH
Q 011954 297 QLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEK-KIQDHVHFVNKTLTVSPYLASIDVLVQNSQARGECFGRIT 375 (474)
Q Consensus 297 ~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~-~l~~~v~~~g~~~~~~~~~~~adv~v~ps~~~~E~~~~~~ 375 (474)
+ ++++++++++|+++ +..+++++.++++ ++. +.+.. .++..+|+.||++|.+| |.+.
T Consensus 216 ~-------~~~~~~~ii~~~~~----~~~~~~~~~~~~~~~~~--v~~~~--~~~~~~~~~aDl~v~~s-------G~~~ 273 (380)
T PRK00025 216 Q-------RYPDLRFVLPLVNP----KRREQIEEALAEYAGLE--VTLLD--GQKREAMAAADAALAAS-------GTVT 273 (380)
T ss_pred H-------hCCCeEEEEecCCh----hhHHHHHHHHhhcCCCC--eEEEc--ccHHHHHHhCCEEEECc-------cHHH
Confidence 5 34789999998632 2567788887776 553 55543 58999999999999976 6788
Q ss_pred HHHHhcCCCEEEc-----------------CCCCcceeeeeCC--ceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHH
Q 011954 376 IEAMAFQLPVLGT-----------------AAGGTMEIVVNGT--TGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKK 436 (474)
Q Consensus 376 ~EAma~G~PvI~s-----------------~~~g~~e~v~~~~--~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~ 436 (474)
+|||++|+|+|++ +.+++++++.++. .+++.+..| ++++++++.++++|++.+++|+++
T Consensus 274 lEa~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~l~~~i~~ll~~~~~~~~~~~~ 351 (380)
T PRK00025 274 LELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNLLAGRELVPELLQEEAT--PEKLARALLPLLADGARRQALLEG 351 (380)
T ss_pred HHHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHHhcCCCcchhhcCCCCC--HHHHHHHHHHHhcCHHHHHHHHHH
Confidence 8999999999987 4566677776653 456667777 999999999999999999999998
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHh
Q 011954 437 GYERVKDRFLEHHMSQRIALVLREVLQ 463 (474)
Q Consensus 437 ~~~~~~~~fs~~~~~~~~~~~~~~~~~ 463 (474)
+.+..... ....++++.+.+.+++.
T Consensus 352 ~~~~~~~~--~~~a~~~~~~~i~~~~~ 376 (380)
T PRK00025 352 FTELHQQL--RCGADERAAQAVLELLK 376 (380)
T ss_pred HHHHHHHh--CCCHHHHHHHHHHHHhh
Confidence 76554442 22244555555554443
|
|
| >TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.4e-20 Score=182.89 Aligned_cols=211 Identities=14% Similarity=0.116 Sum_probs=167.3
Q ss_pred CeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHHHHHHHHHHHHHHHHhccCCC---
Q 011954 231 ETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVP--- 307 (474)
Q Consensus 231 ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~--- 307 (474)
++.++|.|||++.|.............+++|++++ ++.+|++++|+++.||++..++||.++++ ++|
T Consensus 249 ~v~~~PiGID~~~f~~~~~~~~~~~~~~~lr~~~~---~~kiIl~VDRLDy~KGI~~kl~Afe~~L~-------~~Pe~~ 318 (487)
T TIGR02398 249 KLGAHPVGTDPERIRSALAAASIREMMERIRSELA---GVKLILSAERVDYTKGILEKLNAYERLLE-------RRPELL 318 (487)
T ss_pred EEEEEECEecHHHHHHHhcCchHHHHHHHHHHHcC---CceEEEEecccccccCHHHHHHHHHHHHH-------hCcccc
Confidence 37999999999999765433222333567888886 57789999999999999999999999987 446
Q ss_pred -cEEEEEEcCCCCcCc----hHHHHHHHHHHHc-------CCCCeEEEecCC--CChHHHHhcCCEEEEcCCCCCCCCch
Q 011954 308 -SMHAVVVGSDMNAQT----KFETELRNFVAEK-------KIQDHVHFVNKT--LTVSPYLASIDVLVQNSQARGECFGR 373 (474)
Q Consensus 308 -~~~l~i~G~g~~~~~----~~~~~l~~~~~~~-------~l~~~v~~~g~~--~~~~~~~~~adv~v~ps~~~~E~~~~ 373 (474)
++.|+++|.+..... ++..++++++.+. +..+-+.+.+.. +++..+|+.|||++.||. .||+++
T Consensus 319 gkv~Lvqi~~psr~~v~~y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~l--rDGmNL 396 (487)
T TIGR02398 319 GKVTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPL--RDGLNL 396 (487)
T ss_pred CceEEEEEeCCCcccchHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECcc--ccccCc
Confidence 479999987653322 2455666666554 455567777764 889999999999999999 999999
Q ss_pred HHHHHHhcCC----CEEEcCCCCcceeeeeCCceeeecCCCCChHHHHHHHHHHhh-CHHHHHHHHHHHHHHHHHhcCHH
Q 011954 374 ITIEAMAFQL----PVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLAT-HVERRLTMGKKGYERVKDRFLEH 448 (474)
Q Consensus 374 ~~~EAma~G~----PvI~s~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~-~~~~~~~~~~~~~~~~~~~fs~~ 448 (474)
+..|+++|+. |+|.|..+|..+.+ ..+++++|.| ++++|++|.+.++ ..+.+++.-+..++++.+ ++..
T Consensus 397 Va~Eyva~~~~~~GvLILSefaGaa~~l---~~AllVNP~d--~~~~A~ai~~AL~m~~~Er~~R~~~l~~~v~~-~d~~ 470 (487)
T TIGR02398 397 VAKEYVAAQGLLDGVLVLSEFAGAAVEL---KGALLTNPYD--PVRMDETIYVALAMPKAEQQARMREMFDAVNY-YDVQ 470 (487)
T ss_pred chhhHHhhhcCCCCCEEEeccccchhhc---CCCEEECCCC--HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhh-CCHH
Confidence 9999999998 99999999998666 3589999999 9999999999999 455566656666777765 8988
Q ss_pred HHHHHHHHHHH
Q 011954 449 HMSQRIALVLR 459 (474)
Q Consensus 449 ~~~~~~~~~~~ 459 (474)
..++.+++-+.
T Consensus 471 ~W~~~fl~~l~ 481 (487)
T TIGR02398 471 RWADEFLAAVS 481 (487)
T ss_pred HHHHHHHHHhh
Confidence 88888775543
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. |
| >COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.88 E-value=7.2e-20 Score=176.06 Aligned_cols=203 Identities=28% Similarity=0.453 Sum_probs=171.2
Q ss_pred CeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCC--CEEEEEecccccCcchHHHHHHHHHHHHHHHHhccCCCc
Q 011954 231 ETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDD--DLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPS 308 (474)
Q Consensus 231 ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~~ 308 (474)
++.+++|+++.+.+... ...+..+ ...++++||+.+.||++.+++++..+.+ ..++
T Consensus 173 ~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~-------~~~~ 230 (381)
T COG0438 173 KIVVIPNGIDTEKFAPA---------------RIGLLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKK-------RGPD 230 (381)
T ss_pred CceEecCCcCHHHcCcc---------------ccCCCcccCceEEEEeeccChhcCHHHHHHHHHHhhh-------hcCC
Confidence 78999999999977642 1122233 3789999999999999999999998865 2244
Q ss_pred EEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCCC--ChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEE
Q 011954 309 MHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTL--TVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVL 386 (474)
Q Consensus 309 ~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~--~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI 386 (474)
+.++++|.++.. ...+..++.+++..+++.|+|... ++..+++.+|++++||. .|++|++++|||++|+|||
T Consensus 231 ~~~~~~g~~~~~----~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~v~ps~--~e~~~~~~~Ea~a~g~pvi 304 (381)
T COG0438 231 IKLVIVGDGPER----REELEKLAKKLGLEDNVKFLGYVPDEELAELLASADVFVLPSL--SEGFGLVLLEAMAAGTPVI 304 (381)
T ss_pred eEEEEEcCCCcc----HHHHHHHHHHhCCCCcEEEecccCHHHHHHHHHhCCEEEeccc--cccchHHHHHHHhcCCcEE
Confidence 899999998621 356666888888888999999865 78888999999999998 6999999999999999999
Q ss_pred EcCCCCcceeeeeCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Q 011954 387 GTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRFLEHHMSQRIALVLREVLQ 463 (474)
Q Consensus 387 ~s~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~ 463 (474)
+++.++..|++.++.+|+++++.+ .+++++++..++++++.++.+++.+++.+.+.|+|+.+++++.+++.....
T Consensus 305 ~~~~~~~~e~~~~~~~g~~~~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (381)
T COG0438 305 ASDVGGIPEVVEDGETGLLVPPGD--VEELADALEQLLEDPELREELGEAARERVEEEFSWERIAEQLLELYEELLA 379 (381)
T ss_pred ECCCCChHHHhcCCCceEecCCCC--HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Confidence 999999999998777788777776 899999999999988888888887777777889999999999999988764
|
|
| >TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.8e-21 Score=184.38 Aligned_cols=337 Identities=13% Similarity=0.075 Sum_probs=195.7
Q ss_pred CEEEEEecCCCCCChhHHHHHHHHHHHhc-CcEEEEEeCCCCCCchhhhhhcccchhc-cceeee--e------------
Q 011954 75 KLVLLVSHELSLSGGPLLLMELAFLLRGV-GAEVVWITNQKPNEPDEVIYSLEHKMLD-RGVQVL--S------------ 138 (474)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~-G~~V~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~------------ 138 (474)
|||++++..-+-- ..+.-+.++|++. +.++.++...... .....+.+.+.- ..+.+. .
T Consensus 1 ~~i~~~~gtr~~~---~~~~p~~~~l~~~~~~~~~~~~tg~h~---~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 74 (365)
T TIGR00236 1 LKVSIVLGTRPEA---IKMAPLIRALKKYPEIDSYVIVTAQHR---EMLDQVLDLFHLPPDYDLNIMSPGQTLGEITSNM 74 (365)
T ss_pred CeEEEEEecCHHH---HHHHHHHHHHhhCCCCCEEEEEeCCCH---HHHHHHHHhcCCCCCeeeecCCCCCCHHHHHHHH
Confidence 5888888533221 3577888889875 5565555422111 111111111110 011110 0
Q ss_pred hhcHHHHhhhcCCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccc-c---chhhh-hhccc-ccccccccccc
Q 011954 139 AKGEKAINTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGH-Y---FKLEY-VKHLP-FVAGAMIDSYT 212 (474)
Q Consensus 139 ~~~~~~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~-~---~~~~~-~~~~~-~~~~~~~~s~~ 212 (474)
...+..+.+..+||+||+|......+........ ...|++..-++.... . +.... +..+. ..+..++.+..
T Consensus 75 ~~~l~~~l~~~~pDiv~~~gd~~~~la~a~aa~~---~~ipv~h~~~g~~s~~~~~~~~~~~~r~~~~~~ad~~~~~s~~ 151 (365)
T TIGR00236 75 LEGLEELLLEEKPDIVLVQGDTTTTLAGALAAFY---LQIPVGHVEAGLRTGDRYSPMPEEINRQLTGHIADLHFAPTEQ 151 (365)
T ss_pred HHHHHHHHHHcCCCEEEEeCCchHHHHHHHHHHH---hCCCEEEEeCCCCcCCCCCCCccHHHHHHHHHHHHhccCCCHH
Confidence 1234556677999999999754332222222211 123554332222111 0 11111 11111 22334444443
Q ss_pred cHHHHHHhHHHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccc-cCcchHHHHHH
Q 011954 213 TAEYWKNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVS-RGKGQDLFLHS 291 (474)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~-~~Kg~~~ll~a 291 (474)
.++.+. +.|++++++.+++||+....+...... ....++++++. ++.++++..+|.. ..||++.+++|
T Consensus 152 ----~~~~l~-~~G~~~~~I~vign~~~d~~~~~~~~~-----~~~~~~~~~~~-~~~~vl~~~hr~~~~~k~~~~ll~a 220 (365)
T TIGR00236 152 ----AKDNLL-RENVKADSIFVTGNTVIDALLTNVEIA-----YSSPVLSEFGE-DKRYILLTLHRRENVGEPLENIFKA 220 (365)
T ss_pred ----HHHHHH-HcCCCcccEEEeCChHHHHHHHHHhhc-----cchhHHHhcCC-CCCEEEEecCchhhhhhHHHHHHHH
Confidence 344443 358888999999999733322211100 12445666763 3345554444542 46899999999
Q ss_pred HHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCC--CChHHHHhcCCEEEEcCCCCCC
Q 011954 292 FYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKT--LTVSPYLASIDVLVQNSQARGE 369 (474)
Q Consensus 292 ~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~--~~~~~~~~~adv~v~ps~~~~E 369 (474)
+.++.+ ++++++++++|.+.. ..... +.+.++..++|+|+|+. .++..+|+.||+++.+|
T Consensus 221 ~~~l~~-------~~~~~~~vi~~~~~~---~~~~~---~~~~~~~~~~v~~~~~~~~~~~~~~l~~ad~vv~~S----- 282 (365)
T TIGR00236 221 IREIVE-------EFEDVQIVYPVHLNP---VVREP---LHKHLGDSKRVHLIEPLEYLDFLNLAANSHLILTDS----- 282 (365)
T ss_pred HHHHHH-------HCCCCEEEEECCCCh---HHHHH---HHHHhCCCCCEEEECCCChHHHHHHHHhCCEEEECC-----
Confidence 998865 347889988865421 12222 33445566789999965 46778899999998776
Q ss_pred CCchHHHHHHhcCCCEEEc-CCCCcceeeeeCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHH
Q 011954 370 CFGRITIEAMAFQLPVLGT-AAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRFLEH 448 (474)
Q Consensus 370 ~~~~~~~EAma~G~PvI~s-~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~fs~~ 448 (474)
|..++|||+||+|||++ +.|+.+|++.++ .+++++ .| ++++++++.++++|++.+++|+++...+. +..+++
T Consensus 283 --g~~~~EA~a~g~PvI~~~~~~~~~e~~~~g-~~~lv~-~d--~~~i~~ai~~ll~~~~~~~~~~~~~~~~g-~~~a~~ 355 (365)
T TIGR00236 283 --GGVQEEAPSLGKPVLVLRDTTERPETVEAG-TNKLVG-TD--KENITKAAKRLLTDPDEYKKMSNASNPYG-DGEASE 355 (365)
T ss_pred --hhHHHHHHHcCCCEEECCCCCCChHHHhcC-ceEEeC-CC--HHHHHHHHHHHHhChHHHHHhhhcCCCCc-CchHHH
Confidence 34579999999999996 678888888755 566664 45 89999999999999999998887653322 234555
Q ss_pred HHHHHHHH
Q 011954 449 HMSQRIAL 456 (474)
Q Consensus 449 ~~~~~~~~ 456 (474)
++++.+.+
T Consensus 356 ri~~~l~~ 363 (365)
T TIGR00236 356 RIVEELLN 363 (365)
T ss_pred HHHHHHHh
Confidence 55555544
|
Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other. |
| >cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.7e-20 Score=178.76 Aligned_cols=315 Identities=17% Similarity=0.118 Sum_probs=190.4
Q ss_pred EEEEEecCCCCCChhHHHHHHHHHHHhc-CcEEEEEeCCC--CCCchhhhhhcccchhccceee--ee------------
Q 011954 76 LVLLVSHELSLSGGPLLLMELAFLLRGV-GAEVVWITNQK--PNEPDEVIYSLEHKMLDRGVQV--LS------------ 138 (474)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~-G~~V~v~~~~~--~~~~~~~~~~~~~~~~~~~~~~--~~------------ 138 (474)
||++++..-+-- ..+.-+.++|++. |+++.++.... .........+.. ......+.. ..
T Consensus 1 ~i~~~~gtr~~~---~~~~pl~~~l~~~~~~~~~~~~tg~h~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~ 76 (363)
T cd03786 1 KILVVTGTRPEY---IKLAPLIRALKKDPGFELVLVVTGQHYDMEMGVTFFEIL-FIIKPDYDLLLGSDSQSLGAQTAGL 76 (363)
T ss_pred CEEEEEecCHHH---HHHHHHHHHHhcCCCCCEEEEEeCCCCChhhhHHHHHhh-CCCCCCEEEecCCCCCCHHHHHHHH
Confidence 477777532211 3577788889886 89999766421 111111111000 000111111 00
Q ss_pred hhcHHHHhhhcCCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccc---cchhhhhh-cccccccccccccccH
Q 011954 139 AKGEKAINTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGH---YFKLEYVK-HLPFVAGAMIDSYTTA 214 (474)
Q Consensus 139 ~~~~~~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~---~~~~~~~~-~~~~~~~~~~~s~~~~ 214 (474)
...........+||+||+|......+........ ...|++...|+.... ......+. ..+..+.+++.+....
T Consensus 77 ~~~l~~~l~~~~pDvV~~~g~~~~~~~~~~aa~~---~~iPvv~~~~g~~s~~~~~~~~~~r~~~~~~ad~~~~~s~~~~ 153 (363)
T cd03786 77 LIGLEAVLLEEKPDLVLVLGDTNETLAAALAAFK---LGIPVAHVEAGLRSFDRGMPDEENRHAIDKLSDLHFAPTEEAR 153 (363)
T ss_pred HHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHH---cCCCEEEEecccccCCCCCCchHHHHHHHHHhhhccCCCHHHH
Confidence 1123344556799999999644332222222211 134666544433221 10111111 1223344444444443
Q ss_pred HHHHHhHHHHhcCCCCCeEEEeCCC-CccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEeccccc---CcchHHHHH
Q 011954 215 EYWKNRTRERLGIRMPETYVVHLGN-SKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSR---GKGQDLFLH 290 (474)
Q Consensus 215 ~~~~~~~~~~~~~~~~ki~vi~ngv-d~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~---~Kg~~~ll~ 290 (474)
++ +. ++|++.+++.+++|++ |...+...... ....++.++++++++++++.||... .||++.+++
T Consensus 154 ~~----l~-~~G~~~~kI~vign~v~d~~~~~~~~~~------~~~~~~~~~~~~~~~vlv~~~r~~~~~~~k~~~~l~~ 222 (363)
T cd03786 154 RN----LL-QEGEPPERIFVVGNTMIDALLRLLELAK------KELILELLGLLPKKYILVTLHRVENVDDGEQLEEILE 222 (363)
T ss_pred HH----HH-HcCCCcccEEEECchHHHHHHHHHHhhc------cchhhhhcccCCCCEEEEEeCCccccCChHHHHHHHH
Confidence 33 32 4688999999999996 43322211110 1223456788777788888999875 799999999
Q ss_pred HHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCC-CCeEEEecC--CCChHHHHhcCCEEEEcCCCC
Q 011954 291 SFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKI-QDHVHFVNK--TLTVSPYLASIDVLVQNSQAR 367 (474)
Q Consensus 291 a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l-~~~v~~~g~--~~~~~~~~~~adv~v~ps~~~ 367 (474)
++.++.+ .++.+++.|+++ ....+++.+.++++ .++|+|+|. .+++..+|+.||++|.+|
T Consensus 223 al~~l~~---------~~~~vi~~~~~~-----~~~~l~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~ad~~v~~S--- 285 (363)
T cd03786 223 ALAELAE---------EDVPVVFPNHPR-----TRPRIREAGLEFLGHHPNVLLISPLGYLYFLLLLKNADLVLTDS--- 285 (363)
T ss_pred HHHHHHh---------cCCEEEEECCCC-----hHHHHHHHHHhhccCCCCEEEECCcCHHHHHHHHHcCcEEEEcC---
Confidence 9988743 357777777664 67788888888876 678999975 478999999999999988
Q ss_pred CCCCchHHHHHHhcCCCEEEcCC-CCcceeeeeCCceeeecCC-CCChHHHHHHHHHHhhCHHHHHHHH
Q 011954 368 GECFGRITIEAMAFQLPVLGTAA-GGTMEIVVNGTTGLLHPTG-KEGVTPLANNIVKLATHVERRLTMG 434 (474)
Q Consensus 368 ~E~~~~~~~EAma~G~PvI~s~~-~g~~e~v~~~~~G~l~~~~-d~~~~~la~~i~~ll~~~~~~~~~~ 434 (474)
. | ++.|||++|+|+|+++. +..+|.+.+ |..+..+ | +++++++|..++++++.+..|.
T Consensus 286 g---g-i~~Ea~~~g~PvI~~~~~~~~~~~~~~---g~~~~~~~~--~~~i~~~i~~ll~~~~~~~~~~ 345 (363)
T cd03786 286 G---G-IQEEASFLGVPVLNLRDRTERPETVES---GTNVLVGTD--PEAILAAIEKLLSDEFAYSLMS 345 (363)
T ss_pred c---c-HHhhhhhcCCCEEeeCCCCccchhhhe---eeEEecCCC--HHHHHHHHHHHhcCchhhhcCC
Confidence 2 3 47899999999999974 445666644 3333333 4 8999999999999988777763
|
The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st |
| >PRK09814 beta-1,6-galactofuranosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=7.6e-20 Score=174.10 Aligned_cols=289 Identities=12% Similarity=0.099 Sum_probs=186.7
Q ss_pred CChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhcccchhccceeeeehhcHHHHhhhcCC-CEEEEcccchhh-H
Q 011954 87 SGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEHKMLDRGVQVLSAKGEKAINTALNA-DLVVLNTAVAGK-W 164 (474)
Q Consensus 87 gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-DiV~~~~~~~~~-~ 164 (474)
.|+...-.++.+.+.+.|+++.-+......... +.. .......+....++ |+||.+++.... .
T Consensus 15 ~a~~ka~~d~~~~~~~~g~~~~~~~~~~~~~~~-----~~~----------~~~~~~~~~~~~~~~Dvv~~~~P~~~~~~ 79 (333)
T PRK09814 15 SAALKAKNDVTKIAKQLGFEELGIYFYNIKRDS-----LSE----------RSKRLDGILASLKPGDIVIFQFPTWNGFE 79 (333)
T ss_pred chHHHHHHHHHHHHHHCCCeEeEEEecccccch-----HHH----------HHHHHHHHHhcCCCCCEEEEECCCCchHH
Confidence 566688888899999999988766532211000 000 00012223444566 999999875432 1
Q ss_pred HhHHhhhcccccccceeeeeeccccccch------hhhhhcccccccccccccccHHHHHHhHHHHhcCCCCCeEEEeCC
Q 011954 165 LDGVLKDKVSQVLPKVLWWIHEMRGHYFK------LEYVKHLPFVAGAMIDSYTTAEYWKNRTRERLGIRMPETYVVHLG 238 (474)
Q Consensus 165 ~~~~~~~~~~~~~~~~v~~~h~~~~~~~~------~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ki~vi~ng 238 (474)
+...+...+.+...+++.++|+....... ......++.++.+++.+..+.+++. ..|++..++.++++.
T Consensus 80 ~~~~~~~~~k~~~~k~i~~ihD~~~~~~~~~~~~~~~~~~~~~~aD~iI~~S~~~~~~l~-----~~g~~~~~i~~~~~~ 154 (333)
T PRK09814 80 FDRLFVDKLKKKQVKIIILIHDIEPLRFDSNYYLMKEEIDMLNLADVLIVHSKKMKDRLV-----EEGLTTDKIIVQGIF 154 (333)
T ss_pred HHHHHHHHHHHcCCEEEEEECCcHHHhccccchhhHHHHHHHHhCCEEEECCHHHHHHHH-----HcCCCcCceEecccc
Confidence 22222112222357899999997643321 1223445667777777777766654 347766778777766
Q ss_pred CCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCC
Q 011954 239 NSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDM 318 (474)
Q Consensus 239 vd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~ 318 (474)
.+.....+. . .+...+.|+|+|++...++ + + + ..++++|+|+|+|+
T Consensus 155 ~~~~~~~~~--------------~---~~~~~~~i~yaG~l~k~~~---l-~------~-------~~~~~~l~i~G~g~ 200 (333)
T PRK09814 155 DYLNDIELV--------------K---TPSFQKKINFAGNLEKSPF---L-K------N-------WSQGIKLTVFGPNP 200 (333)
T ss_pred ccccccccc--------------c---cccCCceEEEecChhhchH---H-H------h-------cCCCCeEEEECCCc
Confidence 543211110 0 1134568999999984321 1 1 0 12679999999996
Q ss_pred CcCchHHHHHHHHHHHcCCCCeEEEecCC--CChHHHHhcCCEEEEcCCC---------CCCCCchHHHHHHhcCCCEEE
Q 011954 319 NAQTKFETELRNFVAEKKIQDHVHFVNKT--LTVSPYLASIDVLVQNSQA---------RGECFGRITIEAMAFQLPVLG 387 (474)
Q Consensus 319 ~~~~~~~~~l~~~~~~~~l~~~v~~~g~~--~~~~~~~~~adv~v~ps~~---------~~E~~~~~~~EAma~G~PvI~ 387 (474)
. .. ...++|+|+|+. +++..+|+. |+.+.+... ..-++|.++.|+||||+|||+
T Consensus 201 ~-----~~---------~~~~~V~f~G~~~~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~ 265 (333)
T PRK09814 201 E-----DL---------ENSANISYKGWFDPEELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIV 265 (333)
T ss_pred c-----cc---------ccCCCeEEecCCCHHHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEE
Confidence 2 11 234789999975 788889988 665544320 013578899999999999999
Q ss_pred cCCCCcceeeeeCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHH
Q 011954 388 TAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRFLEHHMS 451 (474)
Q Consensus 388 s~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~fs~~~~~ 451 (474)
++.+++.|+|+++.+|++++ + .++++++|..+ +++.+++|++++++.+.. +.--.+.
T Consensus 266 ~~~~~~~~~V~~~~~G~~v~--~--~~el~~~l~~~--~~~~~~~m~~n~~~~~~~-~~~g~~~ 322 (333)
T PRK09814 266 WSKAAIADFIVENGLGFVVD--S--LEELPEIIDNI--TEEEYQEMVENVKKISKL-LRNGYFT 322 (333)
T ss_pred CCCccHHHHHHhCCceEEeC--C--HHHHHHHHHhc--CHHHHHHHHHHHHHHHHH-HhcchhH
Confidence 99999999999999999998 4 78999999886 457789999999987755 4433333
|
|
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.5e-18 Score=177.58 Aligned_cols=294 Identities=15% Similarity=0.165 Sum_probs=195.6
Q ss_pred CCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccccch-------hhhhhcccccccccccccccHHHHHHhHH
Q 011954 150 NADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYFK-------LEYVKHLPFVAGAMIDSYTTAEYWKNRTR 222 (474)
Q Consensus 150 ~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~-------~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 222 (474)
.-|+|.+|+.... .+..+++...+. .++.+..|...+.... ..+.+.+-.++-+-..+....+.+.....
T Consensus 231 ~gD~VWVHDYHL~-LlP~~LR~~~p~--~~IGfFlHiPFPs~Eifr~LP~r~elL~glL~aDlIGFqT~~y~rhFl~~c~ 307 (934)
T PLN03064 231 EGDVVWCHDYHLM-FLPKCLKEYNSN--MKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACT 307 (934)
T ss_pred CCCEEEEecchhh-HHHHHHHHhCCC--CcEEEEecCCCCChHHHhhCCcHHHHHHHHhcCCeEEeCCHHHHHHHHHHHH
Confidence 3479999985543 344455555443 4677777764332211 11222222223222233333333333333
Q ss_pred HHhcCC-----------CCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHHHHHH
Q 011954 223 ERLGIR-----------MPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHS 291 (474)
Q Consensus 223 ~~~~~~-----------~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a 291 (474)
+.+|.. .-++.+.|-|||.+.|.............++++++++ ++.+|+.++|+++.||+...++|
T Consensus 308 rlLg~~~~~~~v~~~Gr~v~V~~~PiGID~~~f~~~~~~~~v~~~~~~lr~~~~---g~kiIlgVDRLD~~KGI~~kL~A 384 (934)
T PLN03064 308 RILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALETPQVQQHIKELKERFA---GRKVMLGVDRLDMIKGIPQKILA 384 (934)
T ss_pred HHhCccccCCeEEECCEEEEEEEEeCEEcHHHHHHHhcChhHHHHHHHHHHHhC---CceEEEEeeccccccCHHHHHHH
Confidence 333321 1236788999999999765433222233467888774 56789999999999999999999
Q ss_pred HHHHHHHHHHhccCCCcE----EEEEEcCCCCcCchHHHH----HHHHHHHcC----CCC--eEEEecC---CCChHHHH
Q 011954 292 FYESLQLIREKKLQVPSM----HAVVVGSDMNAQTKFETE----LRNFVAEKK----IQD--HVHFVNK---TLTVSPYL 354 (474)
Q Consensus 292 ~~~l~~~~~~~~~~~~~~----~l~i~G~g~~~~~~~~~~----l~~~~~~~~----l~~--~v~~~g~---~~~~~~~~ 354 (474)
|.++++ ++|++ .|+-+......+.+..++ +.+++.+.+ -.+ -|+++.. .+++..+|
T Consensus 385 fE~fL~-------~~Pe~r~kVVLvQIa~psr~~v~eY~~l~~~V~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY 457 (934)
T PLN03064 385 FEKFLE-------ENPEWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALY 457 (934)
T ss_pred HHHHHH-------hCccccCCEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHHhhhccCCCcceEEEeccCCCHHHHHHHH
Confidence 999877 44554 344333222111113333 444443322 111 2444442 38899999
Q ss_pred hcCCEEEEcCCCCCCCCchHHHHHHhcCC----CEEEcCCCCcceeeeeCCceeeecCCCCChHHHHHHHHHHhh-CHHH
Q 011954 355 ASIDVLVQNSQARGECFGRITIEAMAFQL----PVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLAT-HVER 429 (474)
Q Consensus 355 ~~adv~v~ps~~~~E~~~~~~~EAma~G~----PvI~s~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~-~~~~ 429 (474)
+.|||+|+||. .||++++..|||+|+. ++|.|...|..+.+ +..+++++|.| ++++|++|.+.++ +++.
T Consensus 458 ~~ADV~lvTsl--rDGmNLva~Eyva~~~~~~GvLILSEfaGaa~~L--~~~AllVNP~D--~~~vA~AI~~AL~M~~~E 531 (934)
T PLN03064 458 AVTDVALVTSL--RDGMNLVSYEFVACQDSKKGVLILSEFAGAAQSL--GAGAILVNPWN--ITEVAASIAQALNMPEEE 531 (934)
T ss_pred HhCCEEEeCcc--ccccCchHHHHHHhhcCCCCCeEEeCCCchHHHh--CCceEEECCCC--HHHHHHHHHHHHhCCHHH
Confidence 99999999999 9999999999999955 55559988888777 55799999999 9999999999999 8999
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Q 011954 430 RLTMGKKGYERVKDRFLEHHMSQRIALVLREVLQ 463 (474)
Q Consensus 430 ~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~ 463 (474)
++++.++.++++.+ +++...++.+++-+.+...
T Consensus 532 r~~r~~~~~~~V~~-~d~~~Wa~~fl~~L~~~~~ 564 (934)
T PLN03064 532 REKRHRHNFMHVTT-HTAQEWAETFVSELNDTVV 564 (934)
T ss_pred HHHHHHHHHhhccc-CCHHHHHHHHHHHHHHHHh
Confidence 99999999999877 9999999998887777654
|
|
| >TIGR02094 more_P_ylases alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.2e-17 Score=167.29 Aligned_cols=186 Identities=14% Similarity=0.164 Sum_probs=147.6
Q ss_pred CCCCCEEEEEecccccCcchHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCc---hHHHHHHHHHHHcCCCCeEE
Q 011954 266 VRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQT---KFETELRNFVAEKKIQDHVH 342 (474)
Q Consensus 266 ~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~---~~~~~l~~~~~~~~l~~~v~ 342 (474)
++++.+++++++|+..+||+++++.++.++.+.+.+ ...+++|++.|.+.+.+. ++.+.+.+++++....++|.
T Consensus 385 ~dpd~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~---~~~pvq~V~~Gka~p~d~~gk~~i~~i~~la~~~~~~~kv~ 461 (601)
T TIGR02094 385 LDPDVLTIGFARRFATYKRADLIFRDLERLARILNN---PERPVQIVFAGKAHPADGEGKEIIQRIVEFSKRPEFRGRIV 461 (601)
T ss_pred cCCCCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhC---CCCCeEEEEEEecCcccchHHHHHHHHHHHHhcccCCCCEE
Confidence 456778999999999999999999999988654322 114699999999865432 25666677776644567888
Q ss_pred Eec-CCCCh-HHHHhcCCEEEE-cCCCCCCCCchHHHHHHhcCCCEEEcCCCCcceeeeeCCceeeecC-----------
Q 011954 343 FVN-KTLTV-SPYLASIDVLVQ-NSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPT----------- 408 (474)
Q Consensus 343 ~~g-~~~~~-~~~~~~adv~v~-ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~~e~v~~~~~G~l~~~----------- 408 (474)
|+- +...+ ..+++.||++++ ||+. .|++|++-+-||..|.+.+++--|...|.. ++.||+.+.+
T Consensus 462 f~~~Yd~~lA~~i~aG~Dv~L~~Psr~-~EacGtsqMka~~nGgL~~sv~DG~~~E~~-~~~nGf~f~~~~~~~~~~~~d 539 (601)
T TIGR02094 462 FLENYDINLARYLVSGVDVWLNNPRRP-LEASGTSGMKAAMNGVLNLSILDGWWGEGY-DGDNGWAIGDGEEYDDEEEQD 539 (601)
T ss_pred EEcCCCHHHHHHHhhhheeEEeCCCCC-cCCchHHHHHHHHcCCceeecccCcccccC-CCCcEEEECCCcccccccccc
Confidence 876 44444 457899999999 9985 899999999999999999999988888876 6789999984
Q ss_pred -CCCChHHHHHHHHHHh-----hC-----HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 011954 409 -GKEGVTPLANNIVKLA-----TH-----VERRLTMGKKGYERVKDRFLEHHMSQRIALVL 458 (474)
Q Consensus 409 -~d~~~~~la~~i~~ll-----~~-----~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~ 458 (474)
.| +++|.++|++.+ ++ |..+.+|.+++.+.....|||++++++|.+.|
T Consensus 540 ~~d--a~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~y 598 (601)
T TIGR02094 540 RLD--AEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDKF 598 (601)
T ss_pred CCC--HHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHHh
Confidence 44 899999997655 22 55688888888877666899999999999987
|
This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343. |
| >KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.79 E-value=4e-16 Score=138.54 Aligned_cols=340 Identities=15% Similarity=0.136 Sum_probs=220.1
Q ss_pred HHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhcccchhccceeeeehh------------------------cHHHHh
Q 011954 91 LLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEHKMLDRGVQVLSAK------------------------GEKAIN 146 (474)
Q Consensus 91 ~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~ 146 (474)
-.+..-|..|++.|++|.++....+....+. +....+.+.... ..+.+.
T Consensus 27 PRMqYHA~Sla~~gf~VdliGy~~s~p~e~l-------~~hprI~ih~m~~l~~~~~~p~~~~l~lKvf~Qfl~Ll~aL~ 99 (444)
T KOG2941|consen 27 PRMQYHALSLAKLGFQVDLIGYVESIPLEEL-------LNHPRIRIHGMPNLPFLQGGPRVLFLPLKVFWQFLSLLWALF 99 (444)
T ss_pred hHHHHHHHHHHHcCCeEEEEEecCCCChHHH-------hcCCceEEEeCCCCcccCCCchhhhhHHHHHHHHHHHHHHHH
Confidence 3466677889999999999985544322222 222222222111 123334
Q ss_pred hhcCCCEEEEcccchhhHHhHHhhh-cccccccceeeeeeccccccchhh-----------hhhccc-cccccccccccc
Q 011954 147 TALNADLVVLNTAVAGKWLDGVLKD-KVSQVLPKVLWWIHEMRGHYFKLE-----------YVKHLP-FVAGAMIDSYTT 213 (474)
Q Consensus 147 ~~~~~DiV~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~h~~~~~~~~~~-----------~~~~~~-~~~~~~~~s~~~ 213 (474)
....+|++...++..-..+..+... .+ .+.+++...|++... .... ..+.+. ...+....+.++
T Consensus 100 ~~~~~~~ilvQNPP~iPtliv~~~~~~l--~~~KfiIDWHNy~Ys-l~l~~~~g~~h~lV~l~~~~E~~fgk~a~~nLcV 176 (444)
T KOG2941|consen 100 VLRPPDIILVQNPPSIPTLIVCVLYSIL--TGAKFIIDWHNYGYS-LQLKLKLGFQHPLVRLVRWLEKYFGKLADYNLCV 176 (444)
T ss_pred hccCCcEEEEeCCCCCchHHHHHHHHHH--hcceEEEEehhhHHH-HHHHhhcCCCCchHHHHHHHHHHhhcccccchhh
Confidence 4589999999886443322222111 11 246888889986322 1111 111111 112222333455
Q ss_pred HHHHHHhHHHHhcCCCCCeEEEeCCCC-----c----cccchhhh---------hHHHHHhHHHHHHhcC------CCCC
Q 011954 214 AEYWKNRTRERLGIRMPETYVVHLGNS-----K----DLMDIAED---------SVARRVLREHVRESLG------VRDD 269 (474)
Q Consensus 214 ~~~~~~~~~~~~~~~~~ki~vi~ngvd-----~----~~~~~~~~---------~~~~~~~~~~~r~~~~------~~~~ 269 (474)
.+.+++.+.+++|+. +..|+|.--. . +.|.+... ...+..++..+-++.. .++.
T Consensus 177 T~AMr~dL~qnWgi~--ra~v~YDrPps~~~~l~~~H~lf~~l~~d~~~f~ar~~q~~~~~~taf~~k~~s~~v~~~~~~ 254 (444)
T KOG2941|consen 177 TKAMREDLIQNWGIN--RAKVLYDRPPSKPTPLDEQHELFMKLAGDHSPFRAREPQDKALERTAFTKKDASGDVQLLPER 254 (444)
T ss_pred HHHHHHHHHHhcCCc--eeEEEecCCCCCCCchhHHHHHHhhhccccchhhhcccccchhhhhhHhhhcccchhhhccCC
Confidence 556666777788875 4556654322 1 11222211 0001111112222221 3445
Q ss_pred CEEEEEecccccCcchHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEec-C--
Q 011954 270 DLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVN-K-- 346 (474)
Q Consensus 270 ~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g-~-- 346 (474)
+.+++.....++..++..|++|+...-+++.+.+...|.+-.+|.|.|| ..+.+.+.++++++. +|.+.- +
T Consensus 255 pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGKGP-----lkE~Y~~~I~~~~~~-~v~~~tpWL~ 328 (444)
T KOG2941|consen 255 PALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGKGP-----LKEKYSQEIHEKNLQ-HVQVCTPWLE 328 (444)
T ss_pred CeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCCCc-----hhHHHHHHHHHhccc-ceeeeecccc
Confidence 5677788889999999999999986655555555567899999999998 899999999999885 455443 3
Q ss_pred CCChHHHHhcCCEE--EEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCcceeeeeCCceeeecCCCCChHHHHHHHHHHh
Q 011954 347 TLTVSPYLASIDVL--VQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLA 424 (474)
Q Consensus 347 ~~~~~~~~~~adv~--v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll 424 (474)
.+|.+.+++.||+. +.+|.+ +=..|++++....||+||++-+...+.|+|++++||++|.+ .++|++.+..+.
T Consensus 329 aEDYP~ll~saDlGVcLHtSSS-GLDLPMKVVDMFGcglPvcA~~fkcl~ELVkh~eNGlvF~D----s~eLa~ql~~lf 403 (444)
T KOG2941|consen 329 AEDYPKLLASADLGVCLHTSSS-GLDLPMKVVDMFGCGLPVCAVNFKCLDELVKHGENGLVFED----SEELAEQLQMLF 403 (444)
T ss_pred cccchhHhhccccceEeeecCc-ccCcchhHHHhhcCCCceeeecchhHHHHHhcCCCceEecc----HHHHHHHHHHHH
Confidence 48999999999974 456653 56689999999999999999999999999999999999975 799999999999
Q ss_pred h----CHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 011954 425 T----HVERRLTMGKKGYERVKDRFLEHHMSQRIA 455 (474)
Q Consensus 425 ~----~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~ 455 (474)
+ +.+...++.++.++. +...|+...++..
T Consensus 404 ~~fp~~a~~l~~lkkn~~e~--~e~RW~~~W~~~~ 436 (444)
T KOG2941|consen 404 KNFPDNADELNQLKKNLREE--QELRWDESWERTA 436 (444)
T ss_pred hcCCCCHHHHHHHHHhhHHH--HhhhHHHHHHHhh
Confidence 8 888999999999887 3356665554433
|
|
| >TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.7e-17 Score=164.40 Aligned_cols=218 Identities=9% Similarity=0.106 Sum_probs=169.9
Q ss_pred cccccccccccccccHHHHHHhHHHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEec-
Q 011954 199 HLPFVAGAMIDSYTTAEYWKNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIIN- 277 (474)
Q Consensus 199 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vg- 277 (474)
.+..++.+++.+....+.+...+... . ...++..||.+.- ... +.... ..+..+++++
T Consensus 269 ~~~~~d~iIv~T~~q~~~l~~~~~~~-~-~~~~v~~Ip~~~~-~~~-~~~s~-----------------r~~~~~I~v~i 327 (519)
T TIGR03713 269 SLSRADLIIVDREDIERLLEENYREN-Y-VEFDISRITPFDT-RLR-LGQSQ-----------------QLYETEIGFWI 327 (519)
T ss_pred ChhhcCeEEEcCHHHHHHHHHHhhhc-c-cCCcceeeCccce-EEe-cChhh-----------------cccceEEEEEc
Confidence 44555666665555555454443221 0 1245677886554 222 11100 2233566777
Q ss_pred -ccccCcchHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCC------------------
Q 011954 278 -SVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQ------------------ 338 (474)
Q Consensus 278 -rl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~------------------ 338 (474)
|+ +.|.++.+|+++.++.+ ++|+++|.+.|.+.. .+....++++++++++.
T Consensus 328 drL-~ek~~~~~I~av~~~~~-------~~p~~~L~~~gy~~~--~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 397 (519)
T TIGR03713 328 DGL-SDEELQQILQQLLQYIL-------KNPDYELKILTYNND--NDITQLLEDILEQINEEYNQDKNFFSLSEQDENQP 397 (519)
T ss_pred CCC-ChHHHHHHHHHHHHHHh-------hCCCeEEEEEEecCc--hhHHHHHHHHHHHHHhhhchhhhccccchhhhhhh
Confidence 99 99999999999999877 569999999998742 12457777787777666
Q ss_pred -----------CeEEEecCCC--ChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCcceeeeeCCceee
Q 011954 339 -----------DHVHFVNKTL--TVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLL 405 (474)
Q Consensus 339 -----------~~v~~~g~~~--~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~~e~v~~~~~G~l 405 (474)
+.|.|.|++. ++.+.|..+.++|.+|. .|||+ +.+||++.|+|+| .-|..++|.++.||++
T Consensus 398 ~~~~~~~~~~~~~v~f~gy~~e~dl~~~~~~arl~id~s~--~eg~~-~~ieAiS~GiPqI---nyg~~~~V~d~~NG~l 471 (519)
T TIGR03713 398 ILQTDEEQKEKERIAFTTLTNEEDLISALDKLRLIIDLSK--EPDLY-TQISGISAGIPQI---NKVETDYVEHNKNGYI 471 (519)
T ss_pred cccchhhcccccEEEEEecCCHHHHHHHHhhheEEEECCC--CCChH-HHHHHHHcCCCee---ecCCceeeEcCCCcEE
Confidence 7999999886 99999999999999999 99999 9999999999999 4566999999999999
Q ss_pred ecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 011954 406 HPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRFLEHHMSQRIALVL 458 (474)
Q Consensus 406 ~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~ 458 (474)
+ +| .++|+++|..++.+++.++++...+++.+.+ ||.+.+.++|.+++
T Consensus 472 i--~d--~~~l~~al~~~L~~~~~wn~~~~~sy~~~~~-yS~~~i~~kW~~~~ 519 (519)
T TIGR03713 472 I--DD--ISELLKALDYYLDNLKNWNYSLAYSIKLIDD-YSSENIIERLNELI 519 (519)
T ss_pred e--CC--HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH-hhHHHHHHHHHhhC
Confidence 9 55 9999999999999999999999999999866 99999999998753
|
This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A | Back alignment and domain information |
|---|
Probab=99.77 E-value=9.3e-19 Score=144.15 Aligned_cols=133 Identities=23% Similarity=0.322 Sum_probs=98.1
Q ss_pred CEEEEEecccccCcchHHHHH-HHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCCC
Q 011954 270 DLLFAIINSVSRGKGQDLFLH-SFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTL 348 (474)
Q Consensus 270 ~~~i~~vgrl~~~Kg~~~ll~-a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~ 348 (474)
-++|+++|++.+.|+++.+++ ++.++.+ +.|+++|+|+|.++ . +++++ ..++|+|+|+.+
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~-------~~p~~~l~i~G~~~-----~--~l~~~-----~~~~v~~~g~~~ 62 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKE-------KHPDIELIIIGNGP-----D--ELKRL-----RRPNVRFHGFVE 62 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHH-------HSTTEEEEEECESS--------HHCCH-----HHCTEEEE-S-H
T ss_pred cccccccccccccccccchhhhHHHHHHH-------HCcCEEEEEEeCCH-----H--HHHHh-----cCCCEEEcCCHH
Confidence 368899999999999999999 9988876 45899999999976 2 24444 125899999988
Q ss_pred ChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCcceeeeeCCceeeecCCCCChHHHHHHHHHHhhC
Q 011954 349 TVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATH 426 (474)
Q Consensus 349 ~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~ 426 (474)
++.++++.||+++.|+.. .+++|.+++|||++|+|||+++. +..+++.....|.++ .++ +++++++|.++++|
T Consensus 63 e~~~~l~~~dv~l~p~~~-~~~~~~k~~e~~~~G~pvi~~~~-~~~~~~~~~~~~~~~-~~~--~~~l~~~i~~l~~d 135 (135)
T PF13692_consen 63 ELPEILAAADVGLIPSRF-NEGFPNKLLEAMAAGKPVIASDN-GAEGIVEEDGCGVLV-AND--PEELAEAIERLLND 135 (135)
T ss_dssp HHHHHHHC-SEEEE-BSS--SCC-HHHHHHHCTT--EEEEHH-HCHCHS---SEEEE--TT---HHHHHHHHHHHHH-
T ss_pred HHHHHHHhCCEEEEEeeC-CCcCcHHHHHHHHhCCCEEECCc-chhhheeecCCeEEE-CCC--HHHHHHHHHHHhcC
Confidence 999999999999999863 67999999999999999999998 566666656677777 666 99999999999875
|
|
| >TIGR00215 lpxB lipid-A-disaccharide synthase | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.2e-16 Score=151.69 Aligned_cols=323 Identities=19% Similarity=0.134 Sum_probs=186.3
Q ss_pred CEEEEEecCCCCCChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhh---hhhcccchhccce-ee--------eehhcH
Q 011954 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEV---IYSLEHKMLDRGV-QV--------LSAKGE 142 (474)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~---~~~~~~~~~~~~~-~~--------~~~~~~ 142 (474)
.||++.... .||..+--.++++|++.|+++.++...++...... ...+ ..+...|+ .. ......
T Consensus 6 ~ki~i~aGg---tsGhi~paal~~~l~~~~~~~~~~g~gg~~m~~~g~~~~~~~-~~l~v~G~~~~l~~~~~~~~~~~~~ 81 (385)
T TIGR00215 6 PTIALVAGE---ASGDILGAGLRQQLKEHYPNARFIGVAGPRMAAEGCEVLYSM-EELSVMGLREVLGRLGRLLKIRKEV 81 (385)
T ss_pred CeEEEEeCC---ccHHHHHHHHHHHHHhcCCCcEEEEEccHHHHhCcCccccCh-HHhhhccHHHHHHHHHHHHHHHHHH
Confidence 356665532 23346655999999999999999885432110000 0000 00111111 00 011133
Q ss_pred HHHhhhcCCCEEEEcccchhhHHhHHhhhcccccccceeeeee-ccccccchhhhhhcccccccccccccccHHHHHHhH
Q 011954 143 KAINTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIH-EMRGHYFKLEYVKHLPFVAGAMIDSYTTAEYWKNRT 221 (474)
Q Consensus 143 ~~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h-~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 221 (474)
.++.+..+||+|++++. ++.-+........ ...|+++++. +.+. +.....+...+.++.+++.+....+++.+
T Consensus 82 ~~~l~~~kPd~vi~~g~-~~~~~~~a~aa~~--~gip~v~~i~P~~wa-w~~~~~r~l~~~~d~v~~~~~~e~~~~~~-- 155 (385)
T TIGR00215 82 VQLAKQAKPDLLVGIDA-PDFNLTKELKKKD--PGIKIIYYISPQVWA-WRKWRAKKIEKATDFLLAILPFEKAFYQK-- 155 (385)
T ss_pred HHHHHhcCCCEEEEeCC-CCccHHHHHHHhh--CCCCEEEEeCCcHhh-cCcchHHHHHHHHhHhhccCCCcHHHHHh--
Confidence 45566789999999985 3322111111111 2346665432 1111 11112223335666677777666655442
Q ss_pred HHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEe-c-cccc-CcchHHHHHHHHHHHHH
Q 011954 222 RERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAII-N-SVSR-GKGQDLFLHSFYESLQL 298 (474)
Q Consensus 222 ~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~v-g-rl~~-~Kg~~~ll~a~~~l~~~ 298 (474)
.+ .+..++.|++-.+.....+. +.+.|++++++++.++|++. | |..+ .|+++.+++++..+.+
T Consensus 156 ---~g---~~~~~vGnPv~~~~~~~~~~-------~~~~r~~lgl~~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~- 221 (385)
T TIGR00215 156 ---KN---VPCRFVGHPLLDAIPLYKPD-------RKSAREKLGIDHNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQ- 221 (385)
T ss_pred ---cC---CCEEEECCchhhhccccCCC-------HHHHHHHcCCCCCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHH-
Confidence 22 35677888874332211011 34567889998777666554 3 6655 6899999999988865
Q ss_pred HHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCCCChHHHHhcCCEEEEcCCCCCCCCchHHHHH
Q 011954 299 IREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYLASIDVLVQNSQARGECFGRITIEA 378 (474)
Q Consensus 299 ~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EA 378 (474)
++|++++++.+.+. .....+++..+.++....|.+.+. ++..+|+.||++|.+| |.+.+||
T Consensus 222 ------~~p~~~~vi~~~~~----~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~l~aADl~V~~S-------Gt~tlEa 282 (385)
T TIGR00215 222 ------QEPDLRRVLPVVNF----KRRLQFEQIKAEYGPDLQLHLIDG--DARKAMFAADAALLAS-------GTAALEA 282 (385)
T ss_pred ------hCCCeEEEEEeCCc----hhHHHHHHHHHHhCCCCcEEEECc--hHHHHHHhCCEEeecC-------CHHHHHH
Confidence 44788887654332 145566777777766556766654 6788999999999988 5567799
Q ss_pred HhcCCCEEEcC-CC----------------CcceeeeeCCceeeecCCCCChHHHHHHHHHHhhCH----HHHHHHHHHH
Q 011954 379 MAFQLPVLGTA-AG----------------GTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHV----ERRLTMGKKG 437 (474)
Q Consensus 379 ma~G~PvI~s~-~~----------------g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~----~~~~~~~~~~ 437 (474)
|++|+|+|... ++ +.+.++.+......+-.++-+++.+++.+.++++|+ +.++++.+.-
T Consensus 283 ~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~nil~~~~~~pel~q~~~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~ 362 (385)
T TIGR00215 283 ALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNILANRLLVPELLQEECTPHPLAIALLLLLENGLKAYKEMHRERQFF 362 (385)
T ss_pred HHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHHhcCCccchhhcCCCCCHHHHHHHHHHHhcCCcccHHHHHHHHHHH
Confidence 99999988872 11 122223222221222222223899999999999999 8888876655
Q ss_pred HHH
Q 011954 438 YER 440 (474)
Q Consensus 438 ~~~ 440 (474)
.+.
T Consensus 363 ~~~ 365 (385)
T TIGR00215 363 EEL 365 (385)
T ss_pred HHH
Confidence 543
|
Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA |
| >cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences | Back alignment and domain information |
|---|
Probab=99.69 E-value=6e-15 Score=150.61 Aligned_cols=192 Identities=15% Similarity=0.153 Sum_probs=148.9
Q ss_pred CCCCCEEEEEecccccCcchHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCch---HHHHHHHHHHHcCCCCeEE
Q 011954 266 VRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTK---FETELRNFVAEKKIQDHVH 342 (474)
Q Consensus 266 ~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~---~~~~l~~~~~~~~l~~~v~ 342 (474)
++++.++|+++.|+..+|+.++++..+.++.+.+.+. ..+++|+++|.+.+.+.. ..+.+.+++++....++|.
T Consensus 474 ldpd~ltigfarRfa~YKR~~Lil~dl~rl~~il~~~---~~pvQ~IfaGKAhP~d~~gK~iIk~i~~~a~~p~~~~kVv 550 (778)
T cd04299 474 LDPNVLTIGFARRFATYKRATLLLRDPERLKRLLNDP---ERPVQFIFAGKAHPADEPGKELIQEIVEFSRRPEFRGRIV 550 (778)
T ss_pred cCCCccEEeeeecchhhhhHHHHHHHHHHHHHHhhCC---CCCeEEEEEEecCccchHHHHHHHHHHHHHhCcCCCCcEE
Confidence 4566789999999999999999999999887654331 146999999998655432 3345555555445567888
Q ss_pred EecC-CCCh-HHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCcceeeeeCCceeeecCCC----------
Q 011954 343 FVNK-TLTV-SPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGK---------- 410 (474)
Q Consensus 343 ~~g~-~~~~-~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~~e~v~~~~~G~l~~~~d---------- 410 (474)
|+.. ...+ ..+++.||++++||+...|.+|++-+-||..|.+-+++--|...|.. ++.||+.+.++.
T Consensus 551 fle~Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~NG~LnlSvlDGww~E~~-~g~nGwaig~~~~~~~~~~~d~ 629 (778)
T cd04299 551 FLEDYDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAALNGGLNLSVLDGWWDEGY-DGENGWAIGDGDEYEDDEYQDA 629 (778)
T ss_pred EEcCCCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHcCCeeeecccCcccccc-CCCCceEeCCCccccChhhcch
Confidence 8764 4444 45789999999999866899999999999999999999999998887 789999998832
Q ss_pred CChHHHHHHHHHHhh----C------HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH-HHHH
Q 011954 411 EGVTPLANNIVKLAT----H------VERRLTMGKKGYERVKDRFLEHHMSQRIALV-LREV 461 (474)
Q Consensus 411 ~~~~~la~~i~~ll~----~------~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~-~~~~ 461 (474)
.|+++|.+.|++-+- + |..+.+|.+++.+.+...|||++|+++|.+- |..+
T Consensus 630 ~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~Y~p~ 691 (778)
T cd04299 630 EEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERFYLPA 691 (778)
T ss_pred hhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhHHHH
Confidence 137777777754332 2 6678899899988888899999999998764 4443
|
Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea. |
| >PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.5e-12 Score=124.26 Aligned_cols=302 Identities=13% Similarity=0.083 Sum_probs=161.9
Q ss_pred CEEEEEecCCCCCChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhh-hhccc-chhcccee----e----------ee
Q 011954 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVI-YSLEH-KMLDRGVQ----V----------LS 138 (474)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~-~~~~~-~~~~~~~~----~----------~~ 138 (474)
+||++.+. .-||--.=...++++|.+.||+|.+++...+.+..-.. +.+.. .+...++. + ..
T Consensus 2 ~~i~~~~G--GTGGHi~Pala~a~~l~~~g~~v~~vg~~~~~e~~l~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 79 (352)
T PRK12446 2 KKIVFTGG--GSAGHVTPNLAIIPYLKEDNWDISYIGSHQGIEKTIIEKENIPYYSISSGKLRRYFDLKNIKDPFLVMKG 79 (352)
T ss_pred CeEEEEcC--CcHHHHHHHHHHHHHHHhCCCEEEEEECCCccccccCcccCCcEEEEeccCcCCCchHHHHHHHHHHHHH
Confidence 45666552 11221233778899999999999999966543321100 00000 01000110 0 00
Q ss_pred hhcHHHHhhhcCCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccccchhhhhhcccccccccccccccHHHHH
Q 011954 139 AKGEKAINTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYFKLEYVKHLPFVAGAMIDSYTTAEYWK 218 (474)
Q Consensus 139 ~~~~~~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 218 (474)
......+.+..+||+||++....+.....+.. + ...|++ +|+..... ....+...++++.+........
T Consensus 80 ~~~~~~i~~~~kPdvvi~~Ggy~s~p~~~aa~--~--~~~p~~--i~e~n~~~-g~~nr~~~~~a~~v~~~f~~~~---- 148 (352)
T PRK12446 80 VMDAYVRIRKLKPDVIFSKGGFVSVPVVIGGW--L--NRVPVL--LHESDMTP-GLANKIALRFASKIFVTFEEAA---- 148 (352)
T ss_pred HHHHHHHHHhcCCCEEEecCchhhHHHHHHHH--H--cCCCEE--EECCCCCc-cHHHHHHHHhhCEEEEEccchh----
Confidence 11223456679999999987555422111111 1 113443 45543211 1112222233333332221111
Q ss_pred HhHHHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHHHHHHHHHHHHH
Q 011954 219 NRTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQL 298 (474)
Q Consensus 219 ~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~ 298 (474)
.+++.+++.++.|++..+..... ++..++.+++++++++++.+|.=.-.+.+ -+++.++...
T Consensus 149 ------~~~~~~k~~~tG~Pvr~~~~~~~---------~~~~~~~~~l~~~~~~iLv~GGS~Ga~~i---n~~~~~~l~~ 210 (352)
T PRK12446 149 ------KHLPKEKVIYTGSPVREEVLKGN---------REKGLAFLGFSRKKPVITIMGGSLGAKKI---NETVREALPE 210 (352)
T ss_pred ------hhCCCCCeEEECCcCCccccccc---------chHHHHhcCCCCCCcEEEEECCccchHHH---HHHHHHHHHh
Confidence 12345688899999877664322 23456678887777666666543223333 3333333222
Q ss_pred HHHhccCCCcEEEE-EEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCC-CChHHHHhcCCEEEEcCCCCCCCCchHHH
Q 011954 299 IREKKLQVPSMHAV-VVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKT-LTVSPYLASIDVLVQNSQARGECFGRITI 376 (474)
Q Consensus 299 ~~~~~~~~~~~~l~-i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~-~~~~~~~~~adv~v~ps~~~~E~~~~~~~ 376 (474)
+. .+++++ ++|... ..+.+.. . .++...++. +++.++|+.||++| .-+.+.++.
T Consensus 211 l~------~~~~vv~~~G~~~-----~~~~~~~----~---~~~~~~~f~~~~m~~~~~~adlvI------sr~G~~t~~ 266 (352)
T PRK12446 211 LL------LKYQIVHLCGKGN-----LDDSLQN----K---EGYRQFEYVHGELPDILAITDFVI------SRAGSNAIF 266 (352)
T ss_pred hc------cCcEEEEEeCCch-----HHHHHhh----c---CCcEEecchhhhHHHHHHhCCEEE------ECCChhHHH
Confidence 21 235655 455431 2222211 1 234556776 78999999999999 445688999
Q ss_pred HHHhcCCCEEEcCCCC-c--------ceeeeeCCceeeecCCCCChHHHHHHHHHHhhCHHHHH
Q 011954 377 EAMAFQLPVLGTAAGG-T--------MEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRL 431 (474)
Q Consensus 377 EAma~G~PvI~s~~~g-~--------~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~ 431 (474)
|++++|+|.|...... . .+.+.+...|..+...+-+++.+.+++.++++|++.++
T Consensus 267 E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~~g~~~~l~~~~~~~~~l~~~l~~ll~~~~~~~ 330 (352)
T PRK12446 267 EFLTLQKPMLLIPLSKFASRGDQILNAESFERQGYASVLYEEDVTVNSLIKHVEELSHNNEKYK 330 (352)
T ss_pred HHHHcCCCEEEEcCCCCCCCchHHHHHHHHHHCCCEEEcchhcCCHHHHHHHHHHHHcCHHHHH
Confidence 9999999999885431 1 12333445566665544348899999999998877654
|
|
| >PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.1e-12 Score=128.24 Aligned_cols=296 Identities=15% Similarity=0.129 Sum_probs=172.4
Q ss_pred cCCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccccc-------hhhhhhcccccccccccccccHHHHHHhH
Q 011954 149 LNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYF-------KLEYVKHLPFVAGAMIDSYTTAEYWKNRT 221 (474)
Q Consensus 149 ~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~-------~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 221 (474)
..-|+|.+|+.....+ ...++...+. .++.+..|...+... .....+.+-.+|.+-..+....+.+....
T Consensus 140 ~~~D~VWVhDYhL~ll-P~~LR~~~~~--~~IgfFlHiPFPs~e~fr~lP~r~eiL~glL~aDlIgFqt~~~~~nFl~~~ 216 (474)
T PF00982_consen 140 RPGDLVWVHDYHLMLL-PQMLRERGPD--ARIGFFLHIPFPSSEIFRCLPWREEILRGLLGADLIGFQTFEYARNFLSCC 216 (474)
T ss_dssp -TT-EEEEESGGGTTH-HHHHHHTT----SEEEEEE-S----HHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHH
T ss_pred cCCCEEEEeCCcHHHH-HHHHHhhcCC--ceEeeEEecCCCCHHHHhhCCcHHHHHHHhhcCCEEEEecHHHHHHHHHHH
Confidence 5678999998654433 3445554444 477777886432211 11222223333333334444444444444
Q ss_pred HHHhcCC-------------CCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHHH
Q 011954 222 RERLGIR-------------MPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLF 288 (474)
Q Consensus 222 ~~~~~~~-------------~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~l 288 (474)
.+.+|.. .-++.+.|-|||++.+........-.....+++++++ .+..+|+.+.|++..||+..=
T Consensus 217 ~r~lg~~~~~~~~~v~~~Gr~v~v~~~pigId~~~~~~~~~~~~v~~~~~~l~~~~~--~~~~ii~gvDrld~~kGi~~k 294 (474)
T PF00982_consen 217 KRLLGLEVDSDRGTVEYNGRRVRVGVFPIGIDPDAFAQLARSPEVQERAEELREKFK--GKRKIIVGVDRLDYTKGIPEK 294 (474)
T ss_dssp HHHS-EEEEETTE-EEETTEEEEEEE------HHHHHHHHH-S---HHHHHHHHHTT--T-SEEEEEE--B-GGG-HHHH
T ss_pred HHHcCCcccCCCceEEECCEEEEEEEeeccCChHHHHhhccChHHHHHHHHHHHhcC--CCcEEEEEeccchhhcCHHHH
Confidence 4444322 1237888999999988765433222333567788774 234788899999999999999
Q ss_pred HHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCch----HHHHHHHHHHH----cCCCC--eEEEecC---CCChHHHHh
Q 011954 289 LHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTK----FETELRNFVAE----KKIQD--HVHFVNK---TLTVSPYLA 355 (474)
Q Consensus 289 l~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~----~~~~l~~~~~~----~~l~~--~v~~~g~---~~~~~~~~~ 355 (474)
+.||.++++..++. ..++.|+-++.......+ +..++.+++.+ +|-.+ -|.++.. .+++..+|+
T Consensus 295 l~Afe~fL~~~P~~---~~kv~liQi~~psr~~~~~y~~~~~~v~~~v~~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~ 371 (474)
T PF00982_consen 295 LRAFERFLERYPEY---RGKVVLIQIAVPSREDVPEYQELRREVEELVGRINGKYGTPDWTPIIYIYRSLSFEELLALYR 371 (474)
T ss_dssp HHHHHHHHHH-GGG---TTTEEEEEE--B-STTSHHHHHHHHHHHHHHHHHHHHH-BTTB-SEEEE-S---HHHHHHHHH
T ss_pred HHHHHHHHHhCcCc---cCcEEEEEEeeccCccchhHHHHHHHHHHHHHHHHhhcccCCceeEEEEecCCCHHHHHHHHH
Confidence 99999999876653 256888877764433332 34455555543 33222 2455542 378999999
Q ss_pred cCCEEEEcCCCCCCCCchHHHHHHhcCCC----EEEcCCCCcceeeeeCCceeeecCCCCChHHHHHHHHHHhh-CHHHH
Q 011954 356 SIDVLVQNSQARGECFGRITIEAMAFQLP----VLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLAT-HVERR 430 (474)
Q Consensus 356 ~adv~v~ps~~~~E~~~~~~~EAma~G~P----vI~s~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~-~~~~~ 430 (474)
.||+++.+|. .+|.-++..|+.+|..+ +|.|...|..+.+ ++..++++|.| ++++|++|.+.++ .++.+
T Consensus 372 ~aDv~lvTsl--rDGmNLva~Eyva~q~~~~GvLiLSefaGaa~~L--~~~al~VNP~d--~~~~A~ai~~AL~M~~~Er 445 (474)
T PF00982_consen 372 AADVALVTSL--RDGMNLVAKEYVACQDDNPGVLILSEFAGAAEQL--SEAALLVNPWD--IEEVADAIHEALTMPPEER 445 (474)
T ss_dssp H-SEEEE--S--SBS--HHHHHHHHHS-TS--EEEEETTBGGGGT---TTS-EEE-TT---HHHHHHHHHHHHT--HHHH
T ss_pred hhhhEEecch--hhccCCcceEEEEEecCCCCceEeeccCCHHHHc--CCccEEECCCC--hHHHHHHHHHHHcCCHHHH
Confidence 9999999999 99999999999999876 7888888888777 33459999999 9999999999999 66677
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 011954 431 LTMGKKGYERVKDRFLEHHMSQRIALVLR 459 (474)
Q Consensus 431 ~~~~~~~~~~~~~~fs~~~~~~~~~~~~~ 459 (474)
+..-+..++++.+ ++....++.+++-++
T Consensus 446 ~~r~~~~~~~v~~-~~~~~W~~~~l~~L~ 473 (474)
T PF00982_consen 446 KERHARLREYVRE-HDVQWWAESFLRDLK 473 (474)
T ss_dssp HHHHHHHHHHHHH-T-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHh-CCHHHHHHHHHHHhh
Confidence 7777777887766 888888888876654
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B. |
| >COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.57 E-value=4.8e-12 Score=119.42 Aligned_cols=250 Identities=15% Similarity=0.113 Sum_probs=152.7
Q ss_pred HHHhhhcCCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccccchhhhhhcccccccccccccccHHHHHHhHH
Q 011954 143 KAINTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYFKLEYVKHLPFVAGAMIDSYTTAEYWKNRTR 222 (474)
Q Consensus 143 ~~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 222 (474)
+.+++..+||+|++.....+.....+... ...|++ +|+.. ......++...+.++.+.......
T Consensus 84 ~~il~~~kPd~vig~Ggyvs~P~~~Aa~~----~~iPv~--ihEqn-~~~G~ank~~~~~a~~V~~~f~~~--------- 147 (357)
T COG0707 84 RKILKKLKPDVVIGTGGYVSGPVGIAAKL----LGIPVI--IHEQN-AVPGLANKILSKFAKKVASAFPKL--------- 147 (357)
T ss_pred HHHHHHcCCCEEEecCCccccHHHHHHHh----CCCCEE--EEecC-CCcchhHHHhHHhhceeeeccccc---------
Confidence 45667799999999775443322221111 123554 55442 111222222222222222211110
Q ss_pred HHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHHHHHHHHHHHHHHHHh
Q 011954 223 ERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREK 302 (474)
Q Consensus 223 ~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~ 302 (474)
.-+.+..++.+..|++..+++. .+. ...+..... ++++|+++|. -.|...+-+++.++...+.
T Consensus 148 -~~~~~~~~~~~tG~Pvr~~~~~-~~~--------~~~~~~~~~--~~~~ilV~GG---S~Ga~~ln~~v~~~~~~l~-- 210 (357)
T COG0707 148 -EAGVKPENVVVTGIPVRPEFEE-LPA--------AEVRKDGRL--DKKTILVTGG---SQGAKALNDLVPEALAKLA-- 210 (357)
T ss_pred -cccCCCCceEEecCcccHHhhc-cch--------hhhhhhccC--CCcEEEEECC---cchhHHHHHHHHHHHHHhh--
Confidence 1234556799999999888776 321 122222222 5666666653 2344445555555444332
Q ss_pred ccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCCCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcC
Q 011954 303 KLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQ 382 (474)
Q Consensus 303 ~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G 382 (474)
.+++++...+.. ..+++++.-.+++. +.+.++.++|..+|+.||++| .-+.++++.|..++|
T Consensus 211 ----~~~~v~~~~G~~-----~~~~~~~~~~~~~~---~~v~~f~~dm~~~~~~ADLvI------sRaGa~Ti~E~~a~g 272 (357)
T COG0707 211 ----NRIQVIHQTGKN-----DLEELKSAYNELGV---VRVLPFIDDMAALLAAADLVI------SRAGALTIAELLALG 272 (357)
T ss_pred ----hCeEEEEEcCcc-----hHHHHHHHHhhcCc---EEEeeHHhhHHHHHHhccEEE------eCCcccHHHHHHHhC
Confidence 246666554432 35556655555554 889999999999999999999 344679999999999
Q ss_pred CCEEEcCCCCc--------ceeeeeCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHH
Q 011954 383 LPVLGTAAGGT--------MEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKD 443 (474)
Q Consensus 383 ~PvI~s~~~g~--------~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~ 443 (474)
+|+|.-..+.. ...+++...|.+++..+-.++.+.+.|.+++++++..++|.+++++....
T Consensus 273 ~P~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i~~~~lt~~~l~~~i~~l~~~~~~l~~m~~~a~~~~~p 341 (357)
T COG0707 273 VPAILVPYPPGADGHQEYNAKFLEKAGAALVIRQSELTPEKLAELILRLLSNPEKLKAMAENAKKLGKP 341 (357)
T ss_pred CCEEEeCCCCCccchHHHHHHHHHhCCCEEEeccccCCHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC
Confidence 99998765533 22344556777777665458899999999999999999999998875544
|
|
| >PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3 | Back alignment and domain information |
|---|
Probab=99.57 E-value=5.8e-13 Score=129.02 Aligned_cols=254 Identities=18% Similarity=0.166 Sum_probs=141.3
Q ss_pred cccccccccccHHHHHHhHHHHhcCCCCCeEEEeCCCCccccchhhhhH-----HHHHhHHHHHHhc----CCC-CCCEE
Q 011954 203 VAGAMIDSYTTAEYWKNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSV-----ARRVLREHVRESL----GVR-DDDLL 272 (474)
Q Consensus 203 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~-----~~~~~~~~~r~~~----~~~-~~~~~ 272 (474)
++.+.++|..+....+. -++-.+ =.|+|||++.+.|....... .+....+-++..+ .++ ++.+.
T Consensus 222 AdvFTTVSeITa~Ea~~----LL~r~p--DvV~pNGl~v~~~~~~~efqnl~~~~k~ki~~fv~~~f~g~~dfd~d~tl~ 295 (633)
T PF05693_consen 222 ADVFTTVSEITAKEAEH----LLKRKP--DVVTPNGLNVDKFPALHEFQNLHAKAKEKIHEFVRGHFYGHYDFDLDKTLY 295 (633)
T ss_dssp SSEEEESSHHHHHHHHH----HHSS----SEE----B-GGGTSSTTHHHHHHHHHHHHHHHHHHHHSTT---S-GGGEEE
T ss_pred cCeeeehhhhHHHHHHH----HhCCCC--CEEcCCCccccccccchHHHHHHHHHHHHHHHHHHHHhcccCCCCccceEE
Confidence 34444555555444332 333232 36899999999876553211 1111112233332 223 45678
Q ss_pred EEEeccccc-CcchHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCc-----------------------------
Q 011954 273 FAIINSVSR-GKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQT----------------------------- 322 (474)
Q Consensus 273 i~~vgrl~~-~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~----------------------------- 322 (474)
|...||.+. .||+|.+|+|+.+|-..++..+.+..=+-|+|+-.....-.
T Consensus 296 ~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~~~tVVaFii~pa~~~~~~ve~l~~~a~~~~l~~t~~~i~~~~g~~~~ 375 (633)
T PF05693_consen 296 FFTSGRYEFRNKGIDVFIEALARLNHRLKQAGSDKTVVAFIIVPAKTNSFNVESLKGQAVTKQLRDTVDEIQEKIGKRLF 375 (633)
T ss_dssp EEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT-S-EEEEEEE---SEEEE-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeeeceeeecCCccHHHHHHHHHHHHHhhcCCCCeEEEEEEecCccCCcCHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888999985 89999999999999887776432112233444433221000
Q ss_pred ---------------------------------------------hHHHHHHHHHHHcCCC----C--eEEEecC-----
Q 011954 323 ---------------------------------------------KFETELRNFVAEKKIQ----D--HVHFVNK----- 346 (474)
Q Consensus 323 ---------------------------------------------~~~~~l~~~~~~~~l~----~--~v~~~g~----- 346 (474)
...+.+-..++++++. + .|+|++.
T Consensus 376 ~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpILn~irr~~L~N~~~drVKVIF~P~yL~~~ 455 (633)
T PF05693_consen 376 ESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPILNMIRRLGLFNNPEDRVKVIFHPEYLSGT 455 (633)
T ss_dssp HHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HHHHHHHHTT----TT-SEEEEE--S---TT
T ss_pred HHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHHHHHHHhCCCCCCCCCceEEEEeeccccCC
Confidence 0112222333334442 2 3566651
Q ss_pred ----CCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCcceeee-----eCCceeeecC-CCCC----
Q 011954 347 ----TLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVV-----NGTTGLLHPT-GKEG---- 412 (474)
Q Consensus 347 ----~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~~e~v~-----~~~~G~l~~~-~d~~---- 412 (474)
--+..+++..||+.|+||. +|+||.+++|+.++|+|.|+||..|....+. ....|+.+-. .+.+
T Consensus 456 dgif~l~Y~dfv~GcdLgvFPSY--YEPWGYTPlE~~a~gVPsITTnLsGFG~~~~~~~~~~~~~GV~VvdR~~~n~~e~ 533 (633)
T PF05693_consen 456 DGIFNLDYYDFVRGCDLGVFPSY--YEPWGYTPLECTAFGVPSITTNLSGFGCWMQEHIEDPEEYGVYVVDRRDKNYDES 533 (633)
T ss_dssp SSSS-S-HHHHHHHSSEEEE--S--SBSS-HHHHHHHHTT--EEEETTBHHHHHHHTTS-HHGGGTEEEE-SSSS-HHHH
T ss_pred CCCCCCCHHHHhccCceeeeccc--cccccCChHHHhhcCCceeeccchhHHHHHHHhhccCcCCcEEEEeCCCCCHHHH
Confidence 1467889999999999999 9999999999999999999999887654332 1345665533 3322
Q ss_pred hHHHHHHHHHHhh-CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhh
Q 011954 413 VTPLANNIVKLAT-HVERRLTMGKKGYERVKDRFLEHHMSQRIALVLREVLQYA 465 (474)
Q Consensus 413 ~~~la~~i~~ll~-~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~~~ 465 (474)
++++++.|..+.. ++..+..+++++.+ ..+.++|+.+...|.+.|..++++.
T Consensus 534 v~~la~~l~~f~~~~~rqri~~Rn~ae~-LS~~~dW~~~~~yY~~Ay~~AL~~a 586 (633)
T PF05693_consen 534 VNQLADFLYKFCQLSRRQRIIQRNRAER-LSDLADWKNFGKYYEKAYDLALRRA 586 (633)
T ss_dssp HHHHHHHHHHHHT--HHHHHHHHHHHHH-HGGGGBHHHHCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHH-HHHhCCHHHHHHHHHHHHHHHHHhc
Confidence 5566666666666 66666667666654 5566999999999999999888754
|
Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D. |
| >PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.6e-14 Score=109.82 Aligned_cols=92 Identities=26% Similarity=0.264 Sum_probs=85.8
Q ss_pred EEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCcceeeeeCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHH
Q 011954 359 VLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGY 438 (474)
Q Consensus 359 v~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~ 438 (474)
+.++|+. .++++..++|+||||+|+|+++.+++.+++.++..+++++ + ++++.+++..+++|++.+++++++|+
T Consensus 1 i~Ln~~~--~~~~~~r~~E~~a~G~~vi~~~~~~~~~~~~~~~~~~~~~--~--~~el~~~i~~ll~~~~~~~~ia~~a~ 74 (92)
T PF13524_consen 1 INLNPSR--SDGPNMRIFEAMACGTPVISDDSPGLREIFEDGEHIITYN--D--PEELAEKIEYLLENPEERRRIAKNAR 74 (92)
T ss_pred CEeeCCC--CCCCchHHHHHHHCCCeEEECChHHHHHHcCCCCeEEEEC--C--HHHHHHHHHHHHCCHHHHHHHHHHHH
Confidence 4677888 7999999999999999999999999999998988999998 4 89999999999999999999999999
Q ss_pred HHHHHhcCHHHHHHHHHH
Q 011954 439 ERVKDRFLEHHMSQRIAL 456 (474)
Q Consensus 439 ~~~~~~fs~~~~~~~~~~ 456 (474)
+++.++|+|+..++++++
T Consensus 75 ~~v~~~~t~~~~~~~il~ 92 (92)
T PF13524_consen 75 ERVLKRHTWEHRAEQILE 92 (92)
T ss_pred HHHHHhCCHHHHHHHHHC
Confidence 999999999999998863
|
|
| >PRK10117 trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=4.1e-12 Score=122.67 Aligned_cols=298 Identities=9% Similarity=0.031 Sum_probs=195.4
Q ss_pred cCCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccccch-------hhhhhcccccccccccccccHHHHHHhH
Q 011954 149 LNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYFK-------LEYVKHLPFVAGAMIDSYTTAEYWKNRT 221 (474)
Q Consensus 149 ~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~-------~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 221 (474)
..-|+|.+|+..... +...++...+. .++.+..|...+...- ....+.+-.+|-+-..+....+.+....
T Consensus 122 ~~~D~VWVHDYhL~l-lp~~LR~~~~~--~~IgFFlHiPFPs~eifr~LP~r~eil~glL~aDlIGFqt~~y~rnFl~~~ 198 (474)
T PRK10117 122 KDDDIIWIHDYHLLP-FASELRKRGVN--NRIGFFLHIPFPTPEIFNALPPHDELLEQLCDYDLLGFQTENDRLAFLDCL 198 (474)
T ss_pred CCCCEEEEeccHhhH-HHHHHHHhCCC--CcEEEEEeCCCCChHHHhhCCChHHHHHHHHhCccceeCCHHHHHHHHHHH
Confidence 345899999865433 33344444433 4677777864332211 1112222222222222222223333222
Q ss_pred HHHhcCC------------CCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHHHH
Q 011954 222 RERLGIR------------MPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFL 289 (474)
Q Consensus 222 ~~~~~~~------------~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~ll 289 (474)
.+.+|.. .-++.+.|-|||.+.|........ .....++++.++ ++.+|+.+.|++.-||+..=+
T Consensus 199 ~~~lg~~~~~~~~v~~~gr~v~v~~~PigID~~~~~~~a~~~~-~~~~~~lr~~~~---~~~lilgVDRLDytKGi~~rl 274 (474)
T PRK10117 199 SNLTRVTTRSGKSHTAWGKAFRTEVYPIGIEPDEIAKQAAGPL-PPKLAQLKAELK---NVQNIFSVERLDYSKGLPERF 274 (474)
T ss_pred HHHcCCcccCCCeEEECCeEEEEEEEECeEcHHHHHHHhhchH-HHHHHHHHHHcC---CCeEEEEecccccccCHHHHH
Confidence 2222221 124778899999999876543222 222466777774 466788899999999999999
Q ss_pred HHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCc----hHHHHHHHHHHHc----CCCC--eEEEecC---CCChHHHHhc
Q 011954 290 HSFYESLQLIREKKLQVPSMHAVVVGSDMNAQT----KFETELRNFVAEK----KIQD--HVHFVNK---TLTVSPYLAS 356 (474)
Q Consensus 290 ~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~----~~~~~l~~~~~~~----~l~~--~v~~~g~---~~~~~~~~~~ 356 (474)
+||.++++...+. ..++.|+-+........ ++..++++++.+. |-.+ -|+++.. .+++..+|..
T Consensus 275 ~Afe~fL~~~Pe~---~gkvvlvQia~psR~~v~~Y~~l~~~v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~alyr~ 351 (474)
T PRK10117 275 LAYEALLEKYPQH---HGKIRYTQIAPTSRGDVQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRY 351 (474)
T ss_pred HHHHHHHHhChhh---cCCEEEEEEcCCCCCccHHHHHHHHHHHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHHHHh
Confidence 9999999865542 24677776765332221 2344555555442 2222 2455442 3788899999
Q ss_pred CCEEEEcCCCCCCCCchHHHHHHhcCC-----CEEEcCCCCcceeeeeCCceeeecCCCCChHHHHHHHHHHhh-CHHHH
Q 011954 357 IDVLVQNSQARGECFGRITIEAMAFQL-----PVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLAT-HVERR 430 (474)
Q Consensus 357 adv~v~ps~~~~E~~~~~~~EAma~G~-----PvI~s~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~-~~~~~ 430 (474)
|||++.++. .+|+-++..|+.||.. .+|.|...|..+.+. ..++++|.| .+++|++|.+.++ .++.+
T Consensus 352 ADv~lVTpl--RDGMNLVAkEyva~q~~~~~GvLILSefAGaA~~L~---~AllVNP~d--~~~~A~Ai~~AL~Mp~~Er 424 (474)
T PRK10117 352 SDVGLVTPL--RDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELT---SALIVNPYD--RDEVAAALDRALTMPLAER 424 (474)
T ss_pred ccEEEeccc--ccccccccchheeeecCCCCccEEEecccchHHHhC---CCeEECCCC--HHHHHHHHHHHHcCCHHHH
Confidence 999999999 9999999999999976 378888888877772 489999999 9999999999999 66677
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhh
Q 011954 431 LTMGKKGYERVKDRFLEHHMSQRIALVLREVLQY 464 (474)
Q Consensus 431 ~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~~ 464 (474)
++.-+..++.+.+ ++....++.+++-+..+-..
T Consensus 425 ~~R~~~l~~~v~~-~dv~~W~~~fL~~L~~~~~~ 457 (474)
T PRK10117 425 ISRHAEMLDVIVK-NDINHWQECFISDLKQIVPR 457 (474)
T ss_pred HHHHHHHHHHhhh-CCHHHHHHHHHHHHHHhhhc
Confidence 7776777777766 89999999999888776443
|
|
| >TIGR02919 accessory Sec system glycosyltransferase GtfB | Back alignment and domain information |
|---|
Probab=99.49 E-value=4e-12 Score=123.36 Aligned_cols=134 Identities=13% Similarity=0.192 Sum_probs=112.3
Q ss_pred HHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCCC-ChHHHHhcCCEEEEcC
Q 011954 286 DLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTL-TVSPYLASIDVLVQNS 364 (474)
Q Consensus 286 ~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~-~~~~~~~~adv~v~ps 364 (474)
+..|+++.+|.+ +.|+++|.| |.+. +....|+++ .++ ++.+.+.|+.. ++.++|..||+++..|
T Consensus 291 s~~I~~i~~Lv~-------~lPd~~f~I-ga~t----e~s~kL~~L-~~y--~nvvly~~~~~~~l~~ly~~~dlyLdin 355 (438)
T TIGR02919 291 SDQIEHLEEIVQ-------ALPDYHFHI-AALT----EMSSKLMSL-DKY--DNVKLYPNITTQKIQELYQTCDIYLDIN 355 (438)
T ss_pred HHHHHHHHHHHH-------hCCCcEEEE-EecC----cccHHHHHH-Hhc--CCcEEECCcChHHHHHHHHhccEEEEcc
Confidence 889999999988 449999999 7765 245788888 666 56777888765 9999999999999999
Q ss_pred CCCCCCCchHHHHHHhcCCCEEEcCCC-CcceeeeeCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHH
Q 011954 365 QARGECFGRITIEAMAFQLPVLGTAAG-GTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERV 441 (474)
Q Consensus 365 ~~~~E~~~~~~~EAma~G~PvI~s~~~-g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~ 441 (474)
. .|++++++.||+..|+||++.+.. |..+++.+ |.+++.++ +++|+++|..++.+++.+++.-..-++.+
T Consensus 356 ~--~e~~~~al~eA~~~G~pI~afd~t~~~~~~i~~---g~l~~~~~--~~~m~~~i~~lL~d~~~~~~~~~~q~~~a 426 (438)
T TIGR02919 356 H--GNEILNAVRRAFEYNLLILGFEETAHNRDFIAS---ENIFEHNE--VDQLISKLKDLLNDPNQFRELLEQQREHA 426 (438)
T ss_pred c--cccHHHHHHHHHHcCCcEEEEecccCCcccccC---CceecCCC--HHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Confidence 9 999999999999999999999866 56677754 89999999 99999999999999987766555545444
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. |
| >PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A | Back alignment and domain information |
|---|
Probab=99.49 E-value=6.7e-14 Score=120.69 Aligned_cols=158 Identities=15% Similarity=0.047 Sum_probs=80.7
Q ss_pred EEEEecCC-CCCChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhh-hhccc----chhccceeeeehhcHHHHhhhcC
Q 011954 77 VLLVSHEL-SLSGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVI-YSLEH----KMLDRGVQVLSAKGEKAINTALN 150 (474)
Q Consensus 77 Il~v~~~~-~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 150 (474)
|+++...+ ..||+|+++.+|+++|+++||+|++++........... ..... .................+.+..+
T Consensus 1 ili~~~~~~~~GG~e~~~~~l~~~l~~~G~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (177)
T PF13439_consen 1 ILITNIFLPNIGGAERVVLNLARALAKRGHEVTVVSPGVKDPIEEELVKIFVKIPYPIRKRFLRSFFFMRRLRRLIKKEK 80 (177)
T ss_dssp -EEECC-TTSSSHHHHHHHHHHHHHHHTT-EEEEEESS-TTS-SSTEEEE---TT-SSTSS--HHHHHHHHHHHHHHHHT
T ss_pred CEEEEecCCCCChHHHHHHHHHHHHHHCCCEEEEEEcCCCccchhhccceeeeeecccccccchhHHHHHHHHHHHHHcC
Confidence 45555554 44888999999999999999999999966544332210 00000 00000111112234455666789
Q ss_pred CCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccc--------cchhh-hh----hcccccccccccccccHHHH
Q 011954 151 ADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGH--------YFKLE-YV----KHLPFVAGAMIDSYTTAEYW 217 (474)
Q Consensus 151 ~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~--------~~~~~-~~----~~~~~~~~~~~~s~~~~~~~ 217 (474)
||+||+|......+...... ..+.+++.|+.... ..... .. ...+..+.++++|..+
T Consensus 81 ~DiVh~~~~~~~~~~~~~~~------~~~~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~vS~~~---- 150 (177)
T PF13439_consen 81 PDIVHIHGPPAFWIALLACR------KVPIVYTIHGPYFERRFLKSKLSPYSYLNFRIERKLYKKADRIIAVSEST---- 150 (177)
T ss_dssp -SEEECCTTHCCCHHHHHHH------CSCEEEEE-HHH--HHTTTTSCCCHHHHHHCTTHHHHCCSSEEEESSHHH----
T ss_pred CCeEEecccchhHHHHHhcc------CCCEEEEeCCCcccccccccccchhhhhhhhhhhhHHhcCCEEEEECHHH----
Confidence 99999998544332222222 35889999987521 11111 11 1124455555555555
Q ss_pred HHhHHHHhcCCCCCeEEEeCCCCccccc
Q 011954 218 KNRTRERLGIRMPETYVVHLGNSKDLMD 245 (474)
Q Consensus 218 ~~~~~~~~~~~~~ki~vi~ngvd~~~~~ 245 (474)
++.+.+ +|+++.++.|||||||.+.|.
T Consensus 151 ~~~l~~-~~~~~~ki~vI~ngid~~~F~ 177 (177)
T PF13439_consen 151 KDELIK-FGIPPEKIHVIYNGIDTDRFR 177 (177)
T ss_dssp HHHHHH-HT--SS-EEE----B-CCCH-
T ss_pred HHHHHH-hCCcccCCEEEECCccHHHcC
Confidence 455555 788999999999999999873
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=99.44 E-value=8.4e-11 Score=122.95 Aligned_cols=297 Identities=11% Similarity=0.066 Sum_probs=193.9
Q ss_pred CEEEEcccchhhHHhHHhhhcccccccceeeeeeccccccc-------hhhhhhcccccccccccccccHHHHHHhHHHH
Q 011954 152 DLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYF-------KLEYVKHLPFVAGAMIDSYTTAEYWKNRTRER 224 (474)
Q Consensus 152 DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~-------~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 224 (474)
|+|.+|+..... +..+++...+. .++.+..|...+... .....+.+-.+|-+-..+....+.+.....+.
T Consensus 203 d~VWVhDYhL~l-lP~~LR~~~~~--~~IgfFlHiPFPs~eifr~LP~r~eiL~glL~aDlIGFht~~yar~Fl~~~~r~ 279 (854)
T PLN02205 203 DFVWIHDYHLMV-LPTFLRKRFNR--VKLGFFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRM 279 (854)
T ss_pred CEEEEeCchhhH-HHHHHHhhCCC--CcEEEEecCCCCChHHHhhCCcHHHHHHHHhcCCeEEecCHHHHHHHHHHHHHH
Confidence 899999865443 33444544443 467777786433221 11122222233333333333333333333333
Q ss_pred hcCC---------------CCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHHHH
Q 011954 225 LGIR---------------MPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFL 289 (474)
Q Consensus 225 ~~~~---------------~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~ll 289 (474)
+|.. .-++.+.|-|||.+.|..............+++++++- .++.+|+.+.|++.-||+..=+
T Consensus 280 lgl~~~~~~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~ilgVDrlD~~KGi~~kl 358 (854)
T PLN02205 280 LGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPETEAKVKELIKQFCD-QDRIMLLGVDDMDIFKGISLKL 358 (854)
T ss_pred hCCcccCCCcceeEEECCcEEEEEEEeCeEcHHHHHHHhcChhHHHHHHHHHHHhcc-CCCEEEEEccCcccccCHHHHH
Confidence 3332 22477889999999886654333223334667777753 3567888999999999999999
Q ss_pred HHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCc----hHHHHHHHHHHH----cCCC--CeEEEecC---CCChHHHHhc
Q 011954 290 HSFYESLQLIREKKLQVPSMHAVVVGSDMNAQT----KFETELRNFVAE----KKIQ--DHVHFVNK---TLTVSPYLAS 356 (474)
Q Consensus 290 ~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~----~~~~~l~~~~~~----~~l~--~~v~~~g~---~~~~~~~~~~ 356 (474)
.||.++++...+. ..++.|+-+.....+.. +...++.+++.+ +|-. ..|+++.. .+++.++|..
T Consensus 359 ~A~e~~L~~~P~~---~gkvvlvQia~psr~~~~~y~~~~~ev~~~v~rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~ 435 (854)
T PLN02205 359 LAMEQLLMQHPEW---QGKVVLVQIANPARGKGKDVKEVQAETHSTVKRINETFGKPGYDPIVLIDAPLKFYERVAYYVV 435 (854)
T ss_pred HHHHHHHHhCccc---cCCEEEEEEecCCCcccHHHHHHHHHHHHHHHHHHhhcCCCCCceEEEEecCCCHHHHHHHHHh
Confidence 9999998854432 13456776665432222 233444455544 3322 13566642 3789999999
Q ss_pred CCEEEEcCCCCCCCCchHHHHHHhcCC-------------------CEEEcCCCCcceeeeeCCceeeecCCCCChHHHH
Q 011954 357 IDVLVQNSQARGECFGRITIEAMAFQL-------------------PVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLA 417 (474)
Q Consensus 357 adv~v~ps~~~~E~~~~~~~EAma~G~-------------------PvI~s~~~g~~e~v~~~~~G~l~~~~d~~~~~la 417 (474)
||+++.++. .+|+-++..|+.+|.. .+|.|...|+...+. ..++++|.| ++++|
T Consensus 436 ADv~lVT~l--RDGMNLva~Eyia~~~~~~~~~~~~~~~~~~~~~gvLiLSEfaGaa~~L~---~Ai~VNP~d--~~~~a 508 (854)
T PLN02205 436 AECCLVTAV--RDGMNLIPYEYIISRQGNEKLDKLLGLEPSTPKKSMLVVSEFIGCSPSLS---GAIRVNPWN--IDAVA 508 (854)
T ss_pred ccEEEeccc--cccccccchheeEEccCccccccccccccccCCCCceEeeeccchhHHhC---cCeEECCCC--HHHHH
Confidence 999999999 9999999999999864 367777777765552 479999999 99999
Q ss_pred HHHHHHhh-CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Q 011954 418 NNIVKLAT-HVERRLTMGKKGYERVKDRFLEHHMSQRIALVLREVLQ 463 (474)
Q Consensus 418 ~~i~~ll~-~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~ 463 (474)
++|.+.++ .++.++..-+..++++.+ ++....++.++.-++.+.+
T Consensus 509 ~ai~~AL~m~~~Er~~R~~~~~~~v~~-~d~~~W~~~fl~~l~~~~~ 554 (854)
T PLN02205 509 DAMDSALEMAEPEKQLRHEKHYRYVST-HDVGYWARSFLQDLERTCR 554 (854)
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHhh-CCHHHHHHHHHHHHHHHHH
Confidence 99999999 555666656677777765 8999999988887777643
|
|
| >COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.39 E-value=3.6e-10 Score=108.77 Aligned_cols=296 Identities=14% Similarity=0.129 Sum_probs=192.5
Q ss_pred cCCCEEEEcccchhhHHhHHhhhcccccccceeeeeecccccc--c-----hhhhhhcccccccccccccccHHHHHHhH
Q 011954 149 LNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHY--F-----KLEYVKHLPFVAGAMIDSYTTAEYWKNRT 221 (474)
Q Consensus 149 ~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~--~-----~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 221 (474)
..=|+|.+|+.... ++..+++...+.. ++.+..|...+.. + ...+...+-.++-+-.......+.+....
T Consensus 146 ~~gDiIWVhDYhL~-L~P~mlR~~~~~~--~IgfFlHiPfPssEvfr~lP~r~eIl~gll~~dligFqt~~y~~nF~~~~ 222 (486)
T COG0380 146 EPGDIIWVHDYHLL-LVPQMLRERIPDA--KIGFFLHIPFPSSEVFRCLPWREEILEGLLGADLIGFQTESYARNFLDLC 222 (486)
T ss_pred CCCCEEEEEechhh-hhHHHHHHhCCCc--eEEEEEeCCCCCHHHHhhCchHHHHHHHhhcCCeeEecCHHHHHHHHHHH
Confidence 45599999985543 3455566666553 6777777543221 1 11111222122222222222222222222
Q ss_pred HHHhc-------------CCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHHH
Q 011954 222 RERLG-------------IRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLF 288 (474)
Q Consensus 222 ~~~~~-------------~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~l 288 (474)
.+..+ -...++..+|-|||+..|............-.++++.++ .+..+|+.+.|++.-||+..=
T Consensus 223 ~r~~~~~~~~~~~~~~~~~~~v~v~a~PIgID~~~~~~~~~~~~v~~~~~el~~~~~--~~~kiivgvDRlDy~kGi~~r 300 (486)
T COG0380 223 SRLLGVTGDADIRFNGADGRIVKVGAFPIGIDPEEFERALKSPSVQEKVLELKAELG--RNKKLIVGVDRLDYSKGIPQR 300 (486)
T ss_pred HHhccccccccccccccCCceEEEEEEeeecCHHHHHHhhcCCchhhHHHHHHHHhc--CCceEEEEehhcccccCcHHH
Confidence 22221 122467889999999988765433322223456677664 336788889999999999999
Q ss_pred HHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCch----HHHHHHHHHHH----cCCC--CeEEEecC---CCChHHHHh
Q 011954 289 LHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTK----FETELRNFVAE----KKIQ--DHVHFVNK---TLTVSPYLA 355 (474)
Q Consensus 289 l~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~----~~~~l~~~~~~----~~l~--~~v~~~g~---~~~~~~~~~ 355 (474)
+.||.++++...+. ..++.|+-++.....+.+ +..++++++.+ +|.. .-|+|+-. .+++..+|.
T Consensus 301 l~Afe~lL~~~Pe~---~~kvvliQi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~ 377 (486)
T COG0380 301 LLAFERLLEEYPEW---RGKVVLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYR 377 (486)
T ss_pred HHHHHHHHHhChhh---hCceEEEEecCCCccccHHHHHHHHHHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHh
Confidence 99999999866553 246778777765544433 33444444443 2221 23445442 378999999
Q ss_pred cCCEEEEcCCCCCCCCchHHHHHHhcC----CCEEEcCCCCcceeeeeCCceeeecCCCCChHHHHHHHHHHhh-CHHHH
Q 011954 356 SIDVLVQNSQARGECFGRITIEAMAFQ----LPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLAT-HVERR 430 (474)
Q Consensus 356 ~adv~v~ps~~~~E~~~~~~~EAma~G----~PvI~s~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~-~~~~~ 430 (474)
.||+++.++. .+|+-++..|+.+|. =|.|.|...|....+.+ .++++|.| .++++++|.+.++ .++.+
T Consensus 378 ~aDv~lVtpl--rDGMNLvakEyVa~q~~~~G~LiLSeFaGaa~~L~~---AliVNP~d--~~~va~ai~~AL~m~~eEr 450 (486)
T COG0380 378 AADVMLVTPL--RDGMNLVAKEYVAAQRDKPGVLILSEFAGAASELRD---ALIVNPWD--TKEVADAIKRALTMSLEER 450 (486)
T ss_pred hhceeeeccc--cccccHHHHHHHHhhcCCCCcEEEeccccchhhhcc---CEeECCCC--hHHHHHHHHHHhcCCHHHH
Confidence 9999999999 999999999999985 47888888777666632 89999999 9999999999999 66666
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 011954 431 LTMGKKGYERVKDRFLEHHMSQRIALVLRE 460 (474)
Q Consensus 431 ~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~ 460 (474)
++.-+..++.+.+ ++....+..+++-+..
T Consensus 451 ~~r~~~~~~~v~~-~d~~~W~~~fl~~la~ 479 (486)
T COG0380 451 KERHEKLLKQVLT-HDVARWANSFLDDLAQ 479 (486)
T ss_pred HHHHHHHHHHHHh-hhHHHHHHHHHHHHHh
Confidence 6666666766655 8888888887666554
|
|
| >TIGR03492 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.8e-10 Score=111.81 Aligned_cols=189 Identities=12% Similarity=0.059 Sum_probs=120.4
Q ss_pred CeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCC-EEEEEecccc--cCcchHHHHHHHHHHHHHHHHhccCCC
Q 011954 231 ETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDD-LLFAIINSVS--RGKGQDLFLHSFYESLQLIREKKLQVP 307 (474)
Q Consensus 231 ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~i~~vgrl~--~~Kg~~~ll~a~~~l~~~~~~~~~~~~ 307 (474)
++.++.|++-....... + .+++++. .+++..|.-. ..++++.+++++.++.+ + +
T Consensus 181 k~~~vGnPv~d~l~~~~---------~------~~l~~~~~~lllLpGSR~ae~~~~lp~~l~al~~L~~-------~-~ 237 (396)
T TIGR03492 181 RASYLGNPMMDGLEPPE---------R------KPLLTGRFRIALLPGSRPPEAYRNLKLLLRALEALPD-------S-Q 237 (396)
T ss_pred eEEEeCcCHHhcCcccc---------c------cccCCCCCEEEEECCCCHHHHHccHHHHHHHHHHHhh-------C-C
Confidence 68888888744432111 0 0343443 4444555442 25677899999988853 3 5
Q ss_pred cEEEEEEc-CCCCcCchHHHHHHHHHHHcCCC--------------CeEEEecCCCChHHHHhcCCEEEEcCCCCCCCCc
Q 011954 308 SMHAVVVG-SDMNAQTKFETELRNFVAEKKIQ--------------DHVHFVNKTLTVSPYLASIDVLVQNSQARGECFG 372 (474)
Q Consensus 308 ~~~l~i~G-~g~~~~~~~~~~l~~~~~~~~l~--------------~~v~~~g~~~~~~~~~~~adv~v~ps~~~~E~~~ 372 (474)
++++++.- ++. ..+.+++...+.+.. +++.+..+..++.++|+.||++|..| |
T Consensus 238 ~~~~v~~~~~~~-----~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~ADlvI~rS-------G 305 (396)
T TIGR03492 238 PFVFLAAIVPSL-----SLEKLQAILEDLGWQLEGSSEDQTSLFQKGTLEVLLGRGAFAEILHWADLGIAMA-------G 305 (396)
T ss_pred CeEEEEEeCCCC-----CHHHHHHHHHhcCceecCCccccchhhccCceEEEechHhHHHHHHhCCEEEECc-------C
Confidence 77776543 222 455666666655543 23666677788999999999999765 3
Q ss_pred hHHHHHHhcCCCEEEcCCCCcc---eeeeeC----CceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhc
Q 011954 373 RITIEAMAFQLPVLGTAAGGTM---EIVVNG----TTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRF 445 (474)
Q Consensus 373 ~~~~EAma~G~PvI~s~~~g~~---e~v~~~----~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~f 445 (474)
.+..|++++|+|+|....++.. .+.+.. ..+......+ ++.+++++..+++|++.+++|.+++++...+..
T Consensus 306 t~T~E~a~lg~P~Ilip~~~~q~na~~~~~~~~l~g~~~~l~~~~--~~~l~~~l~~ll~d~~~~~~~~~~~~~~lg~~~ 383 (396)
T TIGR03492 306 TATEQAVGLGKPVIQLPGKGPQFTYGFAEAQSRLLGGSVFLASKN--PEQAAQVVRQLLADPELLERCRRNGQERMGPPG 383 (396)
T ss_pred HHHHHHHHhCCCEEEEeCCCCHHHHHHHHhhHhhcCCEEecCCCC--HHHHHHHHHHHHcCHHHHHHHHHHHHHhcCCCC
Confidence 4559999999999998744331 122210 2344444555 899999999999999999888865555444445
Q ss_pred CHHHHHHHHHH
Q 011954 446 LEHHMSQRIAL 456 (474)
Q Consensus 446 s~~~~~~~~~~ 456 (474)
..+++++.+.+
T Consensus 384 a~~~ia~~i~~ 394 (396)
T TIGR03492 384 ASARIAESILK 394 (396)
T ss_pred HHHHHHHHHHH
Confidence 55555554443
|
This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown. |
| >COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.34 E-value=9.6e-10 Score=105.28 Aligned_cols=332 Identities=14% Similarity=0.107 Sum_probs=203.2
Q ss_pred ccCEEEEEecCCCCCChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhcccchhccceeeeehh-----cHHHHhh
Q 011954 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEHKMLDRGVQVLSAK-----GEKAINT 147 (474)
Q Consensus 73 ~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 147 (474)
++.+|.++++.+...-.......+-+++.+.-+||..+... ++..+....++. ..--.+++.. ..-.-+.
T Consensus 258 ~rlRvGylS~dlr~Havg~l~~~v~e~hDRdkfEvfay~~g-~~~~dal~~rI~----a~~~~~~~~~~~dd~e~a~~I~ 332 (620)
T COG3914 258 KRLRVGYLSSDLRSHAVGFLLRWVFEYHDRDKFEVFAYSLG-PPHTDALQERIS----AAVEKWYPIGRMDDAEIANAIR 332 (620)
T ss_pred cceeEEEeccccccchHHHHHHHHHHHhchhheEEEEEecC-CCCchhHHHHHH----HhhhheeccCCcCHHHHHHHHH
Confidence 46789999999887666677888888887777899888755 222222211111 1111122222 2233344
Q ss_pred hcCCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccccchhhhhhccccccccccccc----ccHHHHHHhHHH
Q 011954 148 ALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYFKLEYVKHLPFVAGAMIDSY----TTAEYWKNRTRE 223 (474)
Q Consensus 148 ~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~----~~~~~~~~~~~~ 223 (474)
....||.+--+....-....++.... .|+..++-+..+. ...+.++.++.+-. ....++.+.+.+
T Consensus 333 ~d~IdILvDl~g~T~d~r~~v~A~Rp----APiqvswlGy~aT-------~g~p~~DY~I~D~y~vPp~ae~yysEkl~R 401 (620)
T COG3914 333 TDGIDILVDLDGHTVDTRCQVFAHRP----APIQVSWLGYPAT-------TGSPNMDYFISDPYTVPPTAEEYYSEKLWR 401 (620)
T ss_pred hcCCeEEEeccCceeccchhhhhcCC----CceEEeecccccc-------cCCCcceEEeeCceecCchHHHHHHHHHHh
Confidence 56788876433221111111111111 2333333322111 11234445444433 333444443221
Q ss_pred HhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHHHHHHHHHHHHHHHHhc
Q 011954 224 RLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKK 303 (474)
Q Consensus 224 ~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~ 303 (474)
++ - .-...+.+.+.... --|.++|+|++.++++++++ ..|-...+++.+.++.+
T Consensus 402 ---Lp-----~--cy~p~d~~~~v~p~--------~sR~~lglp~~avVf~c~~n--~~K~~pev~~~wmqIL~------ 455 (620)
T COG3914 402 ---LP-----Q--CYQPVDGFEPVTPP--------PSRAQLGLPEDAVVFCCFNN--YFKITPEVFALWMQILS------ 455 (620)
T ss_pred ---cc-----c--ccCCCCCcccCCCC--------cchhhcCCCCCeEEEEecCC--cccCCHHHHHHHHHHHH------
Confidence 12 1 11222333332221 12778999999999888875 56777778888777766
Q ss_pred cCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCC-CeEEEecCC--CChHHHHhcCCEEEEcCCCCCCCCchHHHHHHh
Q 011954 304 LQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQ-DHVHFVNKT--LTVSPYLASIDVLVQNSQARGECFGRITIEAMA 380 (474)
Q Consensus 304 ~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~-~~v~~~g~~--~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma 380 (474)
..|+-.|++-|+|+ +++..+.+++.+++.|+. ++++|.+.. ++..+.|..+|+++=+. .-|...+.+||+.
T Consensus 456 -~vP~Svl~L~~~~~--~~~~~~~l~~la~~~Gv~~eRL~f~p~~~~~~h~a~~~iADlvLDTy---PY~g~TTa~daLw 529 (620)
T COG3914 456 -AVPNSVLLLKAGGD--DAEINARLRDLAEREGVDSERLRFLPPAPNEDHRARYGIADLVLDTY---PYGGHTTASDALW 529 (620)
T ss_pred -hCCCcEEEEecCCC--cHHHHHHHHHHHHHcCCChhheeecCCCCCHHHHHhhchhheeeecc---cCCCccchHHHHH
Confidence 44899999999874 334788999999999985 789999964 67788899999999766 4556789999999
Q ss_pred cCCCEEEc-------CCC-------CcceeeeeCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHH--h
Q 011954 381 FQLPVLGT-------AAG-------GTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKD--R 444 (474)
Q Consensus 381 ~G~PvI~s-------~~~-------g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~--~ 444 (474)
+|+|||+- ..| |++|.| +.. .++..+.-..+-+|...+++.+..-.+.... -
T Consensus 530 m~vPVlT~~G~~FasR~~~si~~~agi~e~v--------A~s----~~dYV~~av~~g~dral~q~~r~~l~~~r~tspL 597 (620)
T COG3914 530 MGVPVLTRVGEQFASRNGASIATNAGIPELV--------ADS----RADYVEKAVAFGSDRALRQQVRAELKRSRQTSPL 597 (620)
T ss_pred hcCceeeeccHHHHHhhhHHHHHhcCCchhh--------cCC----HHHHHHHHHHhcccHHHHHhhHHHHHhccccCcc
Confidence 99999964 222 333333 322 4566666666766777777766554444433 5
Q ss_pred cCHHHHHHHHHHHHHHHHhh
Q 011954 445 FLEHHMSQRIALVLREVLQY 464 (474)
Q Consensus 445 fs~~~~~~~~~~~~~~~~~~ 464 (474)
|+.+.++++++.+|.....+
T Consensus 598 ~d~~~far~le~~y~~M~~~ 617 (620)
T COG3914 598 FDPKAFARKLETLYWGMWSE 617 (620)
T ss_pred cCHHHHHHHHHHHHHHHHHh
Confidence 99999999999999998764
|
|
| >TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG | Back alignment and domain information |
|---|
Probab=99.33 E-value=3.8e-10 Score=104.28 Aligned_cols=253 Identities=17% Similarity=0.179 Sum_probs=142.9
Q ss_pred EEEEEecCCCC-CChh-HHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhcccchhccceeeeehh----------cHH
Q 011954 76 LVLLVSHELSL-SGGP-LLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEHKMLDRGVQVLSAK----------GEK 143 (474)
Q Consensus 76 kIl~v~~~~~~-gG~~-~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~ 143 (474)
||+|......- |.|- .....||++|+++|++|.+++...+.. +.+.+...++.+.... ...
T Consensus 1 ~i~ir~Da~~~iG~GHv~Rcl~LA~~l~~~g~~v~f~~~~~~~~-------~~~~i~~~g~~v~~~~~~~~~~~d~~~~~ 73 (279)
T TIGR03590 1 KILFRADASSEIGLGHVMRCLTLARALHAQGAEVAFACKPLPGD-------LIDLLLSAGFPVYELPDESSRYDDALELI 73 (279)
T ss_pred CEEEEecCCccccccHHHHHHHHHHHHHHCCCEEEEEeCCCCHH-------HHHHHHHcCCeEEEecCCCchhhhHHHHH
Confidence 47777765443 4443 668899999999999999999764431 1234445555554332 234
Q ss_pred HHhhhcCCCEEEEcccc-hhhHHhHHhhhcccccccceeeeeeccccccchhhhhhcccccccccccccccHHHHHHhHH
Q 011954 144 AINTALNADLVVLNTAV-AGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYFKLEYVKHLPFVAGAMIDSYTTAEYWKNRTR 222 (474)
Q Consensus 144 ~~~~~~~~DiV~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 222 (474)
.+....+||+|++.+.. ...|... ++.. .+.+..+-+...+.+ .++.++..... .+...
T Consensus 74 ~~l~~~~~d~vV~D~y~~~~~~~~~-~k~~-----~~~l~~iDD~~~~~~---------~~D~vin~~~~-~~~~~---- 133 (279)
T TIGR03590 74 NLLEEEKFDILIVDHYGLDADWEKL-IKEF-----GRKILVIDDLADRPH---------DCDLLLDQNLG-ADASD---- 133 (279)
T ss_pred HHHHhcCCCEEEEcCCCCCHHHHHH-HHHh-----CCeEEEEecCCCCCc---------CCCEEEeCCCC-cCHhH----
Confidence 55566799999987643 2333332 2221 122223443321111 22322222221 11111
Q ss_pred HHhc-CCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHHHHHHHHHHHHHHHH
Q 011954 223 ERLG-IRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIRE 301 (474)
Q Consensus 223 ~~~~-~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~ 301 (474)
..+ .+... .+.-|.+.-...+ .+.... .....+ ++.+.++++.|...+.+....+++++.++.
T Consensus 134 -y~~~~~~~~--~~l~G~~Y~~lr~---eF~~~~-~~~~~~----~~~~~iLi~~GG~d~~~~~~~~l~~l~~~~----- 197 (279)
T TIGR03590 134 -YQGLVPANC--RLLLGPSYALLRE---EFYQLA-TANKRR----KPLRRVLVSFGGADPDNLTLKLLSALAESQ----- 197 (279)
T ss_pred -hcccCcCCC--eEEecchHHhhhH---HHHHhh-Hhhhcc----cccCeEEEEeCCcCCcCHHHHHHHHHhccc-----
Confidence 111 23233 3344554222211 111000 000000 122457778888777766677778776542
Q ss_pred hccCCCcEE-EEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCCCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHh
Q 011954 302 KKLQVPSMH-AVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYLASIDVLVQNSQARGECFGRITIEAMA 380 (474)
Q Consensus 302 ~~~~~~~~~-l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma 380 (474)
++++ .+++|.+.+ ..+++++.++.. .++++.++++++.++|..||++|.+ .|.++.|+++
T Consensus 198 -----~~~~i~vv~G~~~~----~~~~l~~~~~~~---~~i~~~~~~~~m~~lm~~aDl~Is~-------~G~T~~E~~a 258 (279)
T TIGR03590 198 -----INISITLVTGSSNP----NLDELKKFAKEY---PNIILFIDVENMAELMNEADLAIGA-------AGSTSWERCC 258 (279)
T ss_pred -----cCceEEEEECCCCc----CHHHHHHHHHhC---CCEEEEeCHHHHHHHHHHCCEEEEC-------CchHHHHHHH
Confidence 2333 337777631 456777777654 4799999999999999999999963 3589999999
Q ss_pred cCCCEEEcCC
Q 011954 381 FQLPVLGTAA 390 (474)
Q Consensus 381 ~G~PvI~s~~ 390 (474)
+|+|+|+...
T Consensus 259 ~g~P~i~i~~ 268 (279)
T TIGR03590 259 LGLPSLAICL 268 (279)
T ss_pred cCCCEEEEEe
Confidence 9999998754
|
This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases. |
| >COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.26 E-value=3.1e-09 Score=99.13 Aligned_cols=310 Identities=14% Similarity=0.132 Sum_probs=184.4
Q ss_pred HHHHHHHHHHHhc--CcEEEEEeCCCCCCchhhhhhcccchhccceeeeeh---hcHHHHhhhcCCCEEEEcc--cchhh
Q 011954 91 LLLMELAFLLRGV--GAEVVWITNQKPNEPDEVIYSLEHKMLDRGVQVLSA---KGEKAINTALNADLVVLNT--AVAGK 163 (474)
Q Consensus 91 ~~~~~l~~~L~~~--G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~DiV~~~~--~~~~~ 163 (474)
..+.-|.++|.+. ++.+.+-|..... .......+.+. .-..+.++ ...+++....+||+++... .|+..
T Consensus 63 ~a~~pLv~~l~~~~P~~~ilvTt~T~Tg-~e~a~~~~~~~---v~h~YlP~D~~~~v~rFl~~~~P~l~Ii~EtElWPnl 138 (419)
T COG1519 63 LAALPLVRALRERFPDLRILVTTMTPTG-AERAAALFGDS---VIHQYLPLDLPIAVRRFLRKWRPKLLIIMETELWPNL 138 (419)
T ss_pred HHHHHHHHHHHHhCCCCCEEEEecCccH-HHHHHHHcCCC---eEEEecCcCchHHHHHHHHhcCCCEEEEEeccccHHH
Confidence 6788999999987 6666665532211 11111111111 11112222 2456777789999887644 23333
Q ss_pred HHhHHhhhcccccccceeeeeecccccc------chhhhhhcccccccccccccccHHHHHHhHHHHhcCCCCCeEEEeC
Q 011954 164 WLDGVLKDKVSQVLPKVLWWIHEMRGHY------FKLEYVKHLPFVAGAMIDSYTTAEYWKNRTRERLGIRMPETYVVHL 237 (474)
Q Consensus 164 ~~~~~~~~~~~~~~~~~v~~~h~~~~~~------~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ki~vi~n 237 (474)
. .-+.+.++ |.+.----..... .+......+..++.+++.+....+.+. .+|..+ +.+..|
T Consensus 139 i-~e~~~~~~-----p~~LvNaRLS~rS~~~y~k~~~~~~~~~~~i~li~aQse~D~~Rf~-----~LGa~~--v~v~GN 205 (419)
T COG1519 139 I-NELKRRGI-----PLVLVNARLSDRSFARYAKLKFLARLLFKNIDLILAQSEEDAQRFR-----SLGAKP--VVVTGN 205 (419)
T ss_pred H-HHHHHcCC-----CEEEEeeeechhhhHHHHHHHHHHHHHHHhcceeeecCHHHHHHHH-----hcCCcc--eEEecc
Confidence 2 22222222 3222111111111 111223334555555555555444433 456554 666554
Q ss_pred CCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCC
Q 011954 238 GNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSD 317 (474)
Q Consensus 238 gvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g 317 (474)
+-.+.-.+.. .......+|..++.+ +.+++..+. ....-+.++++++++.+ ++|+..++++-.-
T Consensus 206 -lKfd~~~~~~----~~~~~~~~r~~l~~~--r~v~iaaST--H~GEeei~l~~~~~l~~-------~~~~~llIlVPRH 269 (419)
T COG1519 206 -LKFDIEPPPQ----LAAELAALRRQLGGH--RPVWVAAST--HEGEEEIILDAHQALKK-------QFPNLLLILVPRH 269 (419)
T ss_pred -eeecCCCChh----hHHHHHHHHHhcCCC--CceEEEecC--CCchHHHHHHHHHHHHh-------hCCCceEEEecCC
Confidence 2222111111 122356788888764 556666664 23334558899998877 6689999998665
Q ss_pred CCcCchHHHHHHHHHHHcCCC------------C-eEEEecCCCChHHHHhcCCEEEE-cCCCCCCCCchHHHHHHhcCC
Q 011954 318 MNAQTKFETELRNFVAEKKIQ------------D-HVHFVNKTLTVSPYLASIDVLVQ-NSQARGECFGRITIEAMAFQL 383 (474)
Q Consensus 318 ~~~~~~~~~~l~~~~~~~~l~------------~-~v~~~g~~~~~~~~~~~adv~v~-ps~~~~E~~~~~~~EAma~G~ 383 (474)
| +-...+.+++++.|+. + +|.+....-+|..+|..+|+.++ -|. .+-.|--++|+.++|+
T Consensus 270 p----ERf~~v~~l~~~~gl~~~~rS~~~~~~~~tdV~l~DtmGEL~l~y~~adiAFVGGSl--v~~GGHN~LEpa~~~~ 343 (419)
T COG1519 270 P----ERFKAVENLLKRKGLSVTRRSQGDPPFSDTDVLLGDTMGELGLLYGIADIAFVGGSL--VPIGGHNPLEPAAFGT 343 (419)
T ss_pred h----hhHHHHHHHHHHcCCeEEeecCCCCCCCCCcEEEEecHhHHHHHHhhccEEEECCcc--cCCCCCChhhHHHcCC
Confidence 4 6778888899888763 1 23332234789999999999666 455 5567889999999999
Q ss_pred CEEEcCCC----CcceeeeeCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHH
Q 011954 384 PVLGTAAG----GTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKD 443 (474)
Q Consensus 384 PvI~s~~~----g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~ 443 (474)
|||....- .+.+-+.+.+.|+.+++ .+.+++++..+++|++.+.+|++++.+.+.+
T Consensus 344 pvi~Gp~~~Nf~ei~~~l~~~ga~~~v~~----~~~l~~~v~~l~~~~~~r~~~~~~~~~~v~~ 403 (419)
T COG1519 344 PVIFGPYTFNFSDIAERLLQAGAGLQVED----ADLLAKAVELLLADEDKREAYGRAGLEFLAQ 403 (419)
T ss_pred CEEeCCccccHHHHHHHHHhcCCeEEECC----HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence 99987532 33333334456777764 6789999999988999999999999998876
|
|
| >TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing | Back alignment and domain information |
|---|
Probab=99.22 E-value=4.5e-09 Score=101.02 Aligned_cols=199 Identities=16% Similarity=0.220 Sum_probs=113.2
Q ss_pred HhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCC-CEEEEEecccc--cCcchHHHHHHHHHHHHHHH
Q 011954 224 RLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDD-DLLFAIINSVS--RGKGQDLFLHSFYESLQLIR 300 (474)
Q Consensus 224 ~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~i~~vgrl~--~~Kg~~~ll~a~~~l~~~~~ 300 (474)
+.|.++.++.++.|..-......... .+..+.++++++.+ +++++.+-+-. .....+.+.+.++.+.+.
T Consensus 161 ~eg~~~~~i~~tG~~~iD~l~~~~~~------~~~~~~~~lgl~~~~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~-- 232 (365)
T TIGR03568 161 QMGEDPDRVFNVGSPGLDNILSLDLL------SKEELEEKLGIDLDKPYALVTFHPVTLEKESAEEQIKELLKALDEL-- 232 (365)
T ss_pred HcCCCCCcEEEECCcHHHHHHhhhcc------CHHHHHHHhCCCCCCCEEEEEeCCCcccccCchHHHHHHHHHHHHh--
Confidence 35777888998887652222211111 13567788888643 55555554432 233333344444333221
Q ss_pred HhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecC--CCChHHHHhcCCEEEEcCCCCCCCCchHHHHH
Q 011954 301 EKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNK--TLTVSPYLASIDVLVQNSQARGECFGRITIEA 378 (474)
Q Consensus 301 ~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~--~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EA 378 (474)
..++.++.-..++ ......+.++++... .+++.+.++ ..++..+++.||++|--|. |.. .||
T Consensus 233 -----~~~~~vi~P~~~p-~~~~i~~~i~~~~~~---~~~v~l~~~l~~~~~l~Ll~~a~~vitdSS------ggi-~EA 296 (365)
T TIGR03568 233 -----NKNYIFTYPNADA-GSRIINEAIEEYVNE---HPNFRLFKSLGQERYLSLLKNADAVIGNSS------SGI-IEA 296 (365)
T ss_pred -----ccCCEEEEeCCCC-CchHHHHHHHHHhcC---CCCEEEECCCChHHHHHHHHhCCEEEEcCh------hHH-Hhh
Confidence 1234332211222 111123344444211 357999996 4889999999999995542 323 899
Q ss_pred HhcCCCEEEcCCCCcceeeeeCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 011954 379 MAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRFLEHHMSQRIALV 457 (474)
Q Consensus 379 ma~G~PvI~s~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~ 457 (474)
.++|+|+|+ .+.-+|.+..+.+.+++.. | ++++.+++.+++ +++.++.+. ....-|.....++++.++
T Consensus 297 ~~lg~Pvv~--l~~R~e~~~~g~nvl~vg~-~--~~~I~~a~~~~~-~~~~~~~~~-----~~~~pygdg~as~rI~~~ 364 (365)
T TIGR03568 297 PSFGVPTIN--IGTRQKGRLRADSVIDVDP-D--KEEIVKAIEKLL-DPAFKKSLK-----NVKNPYGDGNSSERIIEI 364 (365)
T ss_pred hhcCCCEEe--ecCCchhhhhcCeEEEeCC-C--HHHHHHHHHHHh-ChHHHHHHh-----hCCCCCCCChHHHHHHHh
Confidence 999999995 4567888877778887743 4 899999999954 444333321 112335555555655543
|
This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate. |
| >PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length | Back alignment and domain information |
|---|
Probab=99.21 E-value=3.8e-09 Score=98.62 Aligned_cols=280 Identities=14% Similarity=0.105 Sum_probs=158.7
Q ss_pred CEEEEEecCCCCCChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhcccchhccceeeeeh---------------
Q 011954 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEHKMLDRGVQVLSA--------------- 139 (474)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 139 (474)
|||++=....+ --.+...+++.|.++||+|.|.+...+. ..+.+...|+.....
T Consensus 1 MkIwiDi~~p~---hvhfFk~~I~eL~~~GheV~it~R~~~~--------~~~LL~~yg~~y~~iG~~g~~~~~Kl~~~~ 69 (335)
T PF04007_consen 1 MKIWIDITHPA---HVHFFKNIIRELEKRGHEVLITARDKDE--------TEELLDLYGIDYIVIGKHGDSLYGKLLESI 69 (335)
T ss_pred CeEEEECCCch---HHHHHHHHHHHHHhCCCEEEEEEeccch--------HHHHHHHcCCCeEEEcCCCCCHHHHHHHHH
Confidence 56666554322 1257889999999999999999976543 222333333333211
Q ss_pred ---hcHHHHhhhcCCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccccchhhhhhcccccccccccccccHHH
Q 011954 140 ---KGEKAINTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYFKLEYVKHLPFVAGAMIDSYTTAEY 216 (474)
Q Consensus 140 ---~~~~~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~ 216 (474)
..+..+.+..+||+++++.+.........+ +.|.+....+.... ...+-.++.++.+++....-...
T Consensus 70 ~R~~~l~~~~~~~~pDv~is~~s~~a~~va~~l-------giP~I~f~D~e~a~---~~~~Lt~Pla~~i~~P~~~~~~~ 139 (335)
T PF04007_consen 70 ERQYKLLKLIKKFKPDVAISFGSPEAARVAFGL-------GIPSIVFNDTEHAI---AQNRLTLPLADVIITPEAIPKEF 139 (335)
T ss_pred HHHHHHHHHHHhhCCCEEEecCcHHHHHHHHHh-------CCCeEEEecCchhh---ccceeehhcCCeeECCcccCHHH
Confidence 122344455899999988755444333322 24555544432111 11223345666666665554443
Q ss_pred HHHhHHHHhcCCCCCeEEE-eCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCc-----ch-HHHH
Q 011954 217 WKNRTRERLGIRMPETYVV-HLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGK-----GQ-DLFL 289 (474)
Q Consensus 217 ~~~~~~~~~~~~~~ki~vi-~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~K-----g~-~~ll 289 (474)
+. ++|.. -++. +||++...+-....+ ..++.+++|+++++++++ |..+.+ |. ..+-
T Consensus 140 ~~-----~~G~~---~~i~~y~G~~E~ayl~~F~P------d~~vl~~lg~~~~~yIvv---R~~~~~A~y~~~~~~i~~ 202 (335)
T PF04007_consen 140 LK-----RFGAK---NQIRTYNGYKELAYLHPFKP------DPEVLKELGLDDEPYIVV---RPEAWKASYDNGKKSILP 202 (335)
T ss_pred HH-----hcCCc---CCEEEECCeeeEEeecCCCC------ChhHHHHcCCCCCCEEEE---EeccccCeeecCccchHH
Confidence 33 45543 2455 889876443322111 246788899876665554 443322 22 2233
Q ss_pred HHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCCCChHHHHhcCCEEEEcCCCCCC
Q 011954 290 HSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYLASIDVLVQNSQARGE 369 (474)
Q Consensus 290 ~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv~v~ps~~~~E 369 (474)
+.+.++ ++. .+. ++++.... .. ..+.+++ ++.+....-+..+++.-||++| ++
T Consensus 203 ~ii~~L----~~~----~~~-vV~ipr~~-----~~---~~~~~~~----~~~i~~~~vd~~~Ll~~a~l~I------g~ 255 (335)
T PF04007_consen 203 EIIEEL----EKY----GRN-VVIIPRYE-----DQ---RELFEKY----GVIIPPEPVDGLDLLYYADLVI------GG 255 (335)
T ss_pred HHHHHH----Hhh----Cce-EEEecCCc-----ch---hhHHhcc----CccccCCCCCHHHHHHhcCEEE------eC
Confidence 334333 321 333 55665432 11 1223333 2555555556778999999999 44
Q ss_pred CCchHHHHHHhcCCCEEEcCCC---CcceeeeeCCceeeecCCCCChHHHHHHHHHHh
Q 011954 370 CFGRITIEAMAFQLPVLGTAAG---GTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLA 424 (474)
Q Consensus 370 ~~~~~~~EAma~G~PvI~s~~~---g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll 424 (474)
| |....||...|+|.|.+-.| +..+.+ -+.|+++...| ++++.+.+...+
T Consensus 256 g-gTMa~EAA~LGtPaIs~~~g~~~~vd~~L--~~~Gll~~~~~--~~ei~~~v~~~~ 308 (335)
T PF04007_consen 256 G-GTMAREAALLGTPAISCFPGKLLAVDKYL--IEKGLLYHSTD--PDEIVEYVRKNL 308 (335)
T ss_pred C-cHHHHHHHHhCCCEEEecCCcchhHHHHH--HHCCCeEecCC--HHHHHHHHHHhh
Confidence 4 57888999999999997544 233444 24689999888 899888665544
|
They are found in archaea and some bacteria and have no known function. |
| >cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Probab=99.20 E-value=2.6e-09 Score=105.05 Aligned_cols=136 Identities=14% Similarity=0.034 Sum_probs=88.2
Q ss_pred CCCEEEEEecccccC---cchHHHHHHHHHHHHHHHHhccCCCcEE-EEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEE
Q 011954 268 DDDLLFAIINSVSRG---KGQDLFLHSFYESLQLIREKKLQVPSMH-AVVVGSDMNAQTKFETELRNFVAEKKIQDHVHF 343 (474)
Q Consensus 268 ~~~~~i~~vgrl~~~---Kg~~~ll~a~~~l~~~~~~~~~~~~~~~-l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~ 343 (474)
.++.+++..|..... +-...+++++.. .+.+ ++.+|.... .. ..++++|.+
T Consensus 238 ~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~------------~~~~~i~~~g~~~~-----~~--------~~~~~~v~~ 292 (401)
T cd03784 238 GRPPVYVGFGSMVVRDPEALARLDVEAVAT------------LGQRAILSLGWGGL-----GA--------EDLPDNVRV 292 (401)
T ss_pred CCCcEEEeCCCCcccCHHHHHHHHHHHHHH------------cCCeEEEEccCccc-----cc--------cCCCCceEE
Confidence 445677778887542 233444444432 2344 445555421 11 344579999
Q ss_pred ecCCCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCc----ceeeeeCCceeeecCCCCChHHHHHH
Q 011954 344 VNKTLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGT----MEIVVNGTTGLLHPTGKEGVTPLANN 419 (474)
Q Consensus 344 ~g~~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~----~e~v~~~~~G~l~~~~d~~~~~la~~ 419 (474)
.++. ....+|..||++| .-|...++.||+++|+|+|+....+- .+.+.....|......+.+.+++.++
T Consensus 293 ~~~~-p~~~ll~~~d~~I------~hgG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~G~g~~l~~~~~~~~~l~~a 365 (401)
T cd03784 293 VDFV-PHDWLLPRCAAVV------HHGGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAGPALDPRELTAERLAAA 365 (401)
T ss_pred eCCC-CHHHHhhhhheee------ecCCchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHCCCCCCCCcccCCHHHHHHH
Confidence 9997 5788999999999 34456899999999999999876542 33344455777776553238999999
Q ss_pred HHHHhhCHHHHHHHHHH
Q 011954 420 IVKLATHVERRLTMGKK 436 (474)
Q Consensus 420 i~~ll~~~~~~~~~~~~ 436 (474)
+.++++++ .+++..+.
T Consensus 366 l~~~l~~~-~~~~~~~~ 381 (401)
T cd03784 366 LRRLLDPP-SRRRAAAL 381 (401)
T ss_pred HHHHhCHH-HHHHHHHH
Confidence 99999753 34444333
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
| >PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A | Back alignment and domain information |
|---|
Probab=99.19 E-value=1e-09 Score=105.67 Aligned_cols=182 Identities=19% Similarity=0.210 Sum_probs=123.7
Q ss_pred HHhcCCCCCCEEEEEecccccCcchHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCC-C
Q 011954 261 RESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQ-D 339 (474)
Q Consensus 261 r~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~-~ 339 (474)
|+.+|+|++.+++++.+++ .|=.+..++++.++++ +.|+.+|++...+. ..++.+++.+.+.|+. +
T Consensus 276 R~~~gLp~d~vvF~~fn~~--~KI~p~~l~~W~~IL~-------~vP~S~L~L~~~~~----~~~~~l~~~~~~~Gv~~~ 342 (468)
T PF13844_consen 276 RAQYGLPEDAVVFGSFNNL--FKISPETLDLWARILK-------AVPNSRLWLLRFPA----SGEARLRRRFAAHGVDPD 342 (468)
T ss_dssp TGGGT--SSSEEEEE-S-G--GG--HHHHHHHHHHHH-------HSTTEEEEEEETST----THHHHHHHHHHHTTS-GG
T ss_pred HHHcCCCCCceEEEecCcc--ccCCHHHHHHHHHHHH-------hCCCcEEEEeeCCH----HHHHHHHHHHHHcCCChh
Confidence 7899999999999888865 6677889999999888 44999998876543 2567889999999986 7
Q ss_pred eEEEecCC--CChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCcce-----eeee-CCceeeecCCCC
Q 011954 340 HVHFVNKT--LTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTME-----IVVN-GTTGLLHPTGKE 411 (474)
Q Consensus 340 ~v~~~g~~--~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~~e-----~v~~-~~~G~l~~~~d~ 411 (474)
++.|.+.. ++....|+.+|+++=+. .-+.+.+.+||+.+|+|||+-....... ++.. |-.-++.. +
T Consensus 343 Ri~f~~~~~~~ehl~~~~~~DI~LDT~---p~nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~ElIA~--s- 416 (468)
T PF13844_consen 343 RIIFSPVAPREEHLRRYQLADICLDTF---PYNGGTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPELIAD--S- 416 (468)
T ss_dssp GEEEEE---HHHHHHHGGG-SEEE--S---SS--SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGGB-S--S-
T ss_pred hEEEcCCCCHHHHHHHhhhCCEEeeCC---CCCCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchhcCC--C-
Confidence 89998853 45556788999999875 3456899999999999999875322211 1110 21223333 2
Q ss_pred ChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHH
Q 011954 412 GVTPLANNIVKLATHVERRLTMGKKGYERVKD--RFLEHHMSQRIALVLREVL 462 (474)
Q Consensus 412 ~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~--~fs~~~~~~~~~~~~~~~~ 462 (474)
.++..+.-.+|.+|++.++++++.-++...+ -|+...+++.+++.|++++
T Consensus 417 -~~eYv~~Av~La~D~~~l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~~mW 468 (468)
T PF13844_consen 417 -EEEYVEIAVRLATDPERLRALRAKLRDRRSKSPLFDPKRFARNLEAAYRQMW 468 (468)
T ss_dssp -HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHSGGG-HHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHhC
Confidence 7899999999999999999999988877643 4999999999999998763
|
|
| >PF13528 Glyco_trans_1_3: Glycosyl transferase family 1 | Back alignment and domain information |
|---|
Probab=99.17 E-value=8.8e-10 Score=104.74 Aligned_cols=120 Identities=16% Similarity=0.199 Sum_probs=85.0
Q ss_pred CCCEEEEEecccccCcchHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCC
Q 011954 268 DDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKT 347 (474)
Q Consensus 268 ~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~ 347 (474)
+.+.+++++|..... .++++++++ ++.+++++|... .+. ..++|++.++.
T Consensus 191 ~~~~iLv~~gg~~~~----~~~~~l~~~-----------~~~~~~v~g~~~-------~~~--------~~~ni~~~~~~ 240 (318)
T PF13528_consen 191 DEPKILVYFGGGGPG----DLIEALKAL-----------PDYQFIVFGPNA-------ADP--------RPGNIHVRPFS 240 (318)
T ss_pred CCCEEEEEeCCCcHH----HHHHHHHhC-----------CCCeEEEEcCCc-------ccc--------cCCCEEEeecC
Confidence 456788889876554 566666654 778999997652 000 04799999986
Q ss_pred -CChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCcce------eeeeCCceeeecCCCCChHHHHHHH
Q 011954 348 -LTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTME------IVVNGTTGLLHPTGKEGVTPLANNI 420 (474)
Q Consensus 348 -~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~~e------~v~~~~~G~l~~~~d~~~~~la~~i 420 (474)
.++.+++..||++|.. +.-.++.||+++|+|+|.-...+..| .++....|...+..+-+++.|.++|
T Consensus 241 ~~~~~~~m~~ad~vIs~------~G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~~~~~~~~~~l~~~l 314 (318)
T PF13528_consen 241 TPDFAELMAAADLVISK------GGYTTISEALALGKPALVIPRPGQDEQEYNARKLEELGLGIVLSQEDLTPERLAEFL 314 (318)
T ss_pred hHHHHHHHHhCCEEEEC------CCHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCeEEcccccCCHHHHHHHH
Confidence 8999999999999943 33456999999999999988766444 2334456666654443378888888
Q ss_pred HHH
Q 011954 421 VKL 423 (474)
Q Consensus 421 ~~l 423 (474)
+++
T Consensus 315 ~~~ 317 (318)
T PF13528_consen 315 ERL 317 (318)
T ss_pred hcC
Confidence 753
|
|
| >COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.7e-08 Score=93.30 Aligned_cols=319 Identities=17% Similarity=0.149 Sum_probs=173.1
Q ss_pred cCEEEEEecCCCCCChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhc--ccchhcccee-ee-eh-------hcH
Q 011954 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSL--EHKMLDRGVQ-VL-SA-------KGE 142 (474)
Q Consensus 74 ~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~-~~-------~~~ 142 (474)
++||.++..+.+- ..+-..|.++|+++=-+|.++...++....+....+ ...+...|+. +. .. +..
T Consensus 1 ~~ki~i~AGE~SG---DllGa~LikaLk~~~~~~efvGvgG~~m~aeG~~sl~~~~elsvmGf~EVL~~lp~llk~~~~~ 77 (381)
T COG0763 1 MLKIALSAGEASG---DLLGAGLIKALKARYPDVEFVGVGGEKMEAEGLESLFDMEELSVMGFVEVLGRLPRLLKIRREL 77 (381)
T ss_pred CceEEEEecccch---hhHHHHHHHHHHhhCCCeEEEEeccHHHHhccCccccCHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 4678888876532 256778889998753377777654332111110000 0011111110 00 00 111
Q ss_pred HHHhhhcCCCEEEEccc-chhhHHhHHhhhcccccccceeeeeeccccccchhh---hhhcccccccccccccccHHHHH
Q 011954 143 KAINTALNADLVVLNTA-VAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYFKLE---YVKHLPFVAGAMIDSYTTAEYWK 218 (474)
Q Consensus 143 ~~~~~~~~~DiV~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~---~~~~~~~~~~~~~~s~~~~~~~~ 218 (474)
.+.....+||++++-++ ....-+...+++..|. .|+++++- +..+.++ .....+.+|...+...+=.+++.
T Consensus 78 ~~~i~~~kpD~~i~IDsPdFnl~vak~lrk~~p~--i~iihYV~---PsVWAWr~~Ra~~i~~~~D~lLailPFE~~~y~ 152 (381)
T COG0763 78 VRYILANKPDVLILIDSPDFNLRVAKKLRKAGPK--IKIIHYVS---PSVWAWRPKRAVKIAKYVDHLLAILPFEPAFYD 152 (381)
T ss_pred HHHHHhcCCCEEEEeCCCCCchHHHHHHHHhCCC--CCeEEEEC---cceeeechhhHHHHHHHhhHeeeecCCCHHHHH
Confidence 22233589999988763 3344444444444333 25544443 3333222 22333566666666666666655
Q ss_pred HhHHHHhcCCCCCeEEEeCCCCccc-cchhhhhHHHHHhHHHHHHhcCCCCCC-EEEEEecccccCcchHHHHHHHHHHH
Q 011954 219 NRTRERLGIRMPETYVVHLGNSKDL-MDIAEDSVARRVLREHVRESLGVRDDD-LLFAIINSVSRGKGQDLFLHSFYESL 296 (474)
Q Consensus 219 ~~~~~~~~~~~~ki~vi~ngvd~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~i~~vgrl~~~Kg~~~ll~a~~~l~ 296 (474)
++|.+ .+.|.++.-.+. +.++ ++..|++++++.+. .+.+..|+ +.--+..++..|.+..
T Consensus 153 -----k~g~~---~~yVGHpl~d~i~~~~~---------r~~ar~~l~~~~~~~~lalLPGS--R~sEI~rl~~~f~~a~ 213 (381)
T COG0763 153 -----KFGLP---CTYVGHPLADEIPLLPD---------REAAREKLGIDADEKTLALLPGS--RRSEIRRLLPPFVQAA 213 (381)
T ss_pred -----hcCCC---eEEeCChhhhhcccccc---------HHHHHHHhCCCCCCCeEEEecCC--cHHHHHHHHHHHHHHH
Confidence 34543 667777664333 2222 46689999998776 44445563 3333444444444444
Q ss_pred HHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCC-CeEEEecCCCChHHHHhcCCEEEEcCCCCCCCCchHH
Q 011954 297 QLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQ-DHVHFVNKTLTVSPYLASIDVLVQNSQARGECFGRIT 375 (474)
Q Consensus 297 ~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~-~~v~~~g~~~~~~~~~~~adv~v~ps~~~~E~~~~~~ 375 (474)
+.+++ ++|+.++++--... ..+.++....+.... ..+++. ..+-.+.+..||+.+..| |.+.
T Consensus 214 ~~l~~---~~~~~~~vlp~~~~-----~~~~~~~~~~~~~~~~~~~~~~--~~~~~~a~~~aD~al~aS-------GT~t 276 (381)
T COG0763 214 QELKA---RYPDLKFVLPLVNA-----KYRRIIEEALKWEVAGLSLILI--DGEKRKAFAAADAALAAS-------GTAT 276 (381)
T ss_pred HHHHh---hCCCceEEEecCcH-----HHHHHHHHHhhccccCceEEec--CchHHHHHHHhhHHHHhc-------cHHH
Confidence 44443 56999999888763 434444444333221 122222 236678999999999776 7899
Q ss_pred HHHHhcCCCEEEc-----------------CCCCcceeeeeCCc--eeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHH
Q 011954 376 IEAMAFQLPVLGT-----------------AAGGTMEIVVNGTT--GLLHPTGKEGVTPLANNIVKLATHVERRLTMGKK 436 (474)
Q Consensus 376 ~EAma~G~PvI~s-----------------~~~g~~e~v~~~~~--G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~ 436 (474)
+|+|.+|+|.|++ ..-+.+.++.+... -++-+.-. ++.+++++..++.|.+.++++.+.
T Consensus 277 LE~aL~g~P~Vv~Yk~~~it~~iak~lvk~~yisLpNIi~~~~ivPEliq~~~~--pe~la~~l~~ll~~~~~~~~~~~~ 354 (381)
T COG0763 277 LEAALAGTPMVVAYKVKPITYFIAKRLVKLPYVSLPNILAGREIVPELIQEDCT--PENLARALEELLLNGDRREALKEK 354 (381)
T ss_pred HHHHHhCCCEEEEEeccHHHHHHHHHhccCCcccchHHhcCCccchHHHhhhcC--HHHHHHHHHHHhcChHhHHHHHHH
Confidence 9999999999876 12233334322110 01112223 899999999999988666665554
Q ss_pred HH
Q 011954 437 GY 438 (474)
Q Consensus 437 ~~ 438 (474)
..
T Consensus 355 ~~ 356 (381)
T COG0763 355 FR 356 (381)
T ss_pred HH
Confidence 33
|
|
| >PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.08 E-value=3.1e-08 Score=93.86 Aligned_cols=301 Identities=18% Similarity=0.167 Sum_probs=166.3
Q ss_pred hHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhcc--cchhccce-eee-e-------hhcHHHHhhhcCCCEEEEcc
Q 011954 90 PLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLE--HKMLDRGV-QVL-S-------AKGEKAINTALNADLVVLNT 158 (474)
Q Consensus 90 ~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~-~-------~~~~~~~~~~~~~DiV~~~~ 158 (474)
..+...|+++|++.+-++.++...++.........+. ..+...|+ .++ . ...........+||+|+.-+
T Consensus 11 D~~ga~Li~~Lk~~~p~~~~~GvGG~~M~~~G~~~l~d~~~lsvmG~~Evl~~l~~~~~~~~~~~~~~~~~~pd~vIlID 90 (373)
T PF02684_consen 11 DLHGARLIRALKARDPDIEFYGVGGPRMQAAGVESLFDMEELSVMGFVEVLKKLPKLKRLFRKLVERIKEEKPDVVILID 90 (373)
T ss_pred HHHHHHHHHHHHhhCCCcEEEEEechHHHhCCCceecchHHhhhccHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeC
Confidence 4789999999999887888777554322111000000 00001111 000 0 11223344568999998876
Q ss_pred c-chhhHHhHHhhhcccccccceeeeeeccccccchh---hhhhcccccccccccccccHHHHHHhHHHHhcCCCCCeEE
Q 011954 159 A-VAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYFKL---EYVKHLPFVAGAMIDSYTTAEYWKNRTRERLGIRMPETYV 234 (474)
Q Consensus 159 ~-~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~---~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ki~v 234 (474)
. .....+...++... +..|+++++- +..+.+ +....-+.+|...+...+=.+++++ .| -++..
T Consensus 91 ~pgFNlrlak~lk~~~--~~~~viyYI~---PqvWAWr~~R~~~i~~~~D~ll~ifPFE~~~y~~-----~g---~~~~~ 157 (373)
T PF02684_consen 91 YPGFNLRLAKKLKKRG--IPIKVIYYIS---PQVWAWRPGRAKKIKKYVDHLLVIFPFEPEFYKK-----HG---VPVTY 157 (373)
T ss_pred CCCccHHHHHHHHHhC--CCceEEEEEC---CceeeeCccHHHHHHHHHhheeECCcccHHHHhc-----cC---CCeEE
Confidence 3 33333333333322 1123555554 222221 1222224556666666666666553 34 34778
Q ss_pred EeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCE-EEEEecc-ccc-CcchHHHHHHHHHHHHHHHHhccCCCcEEE
Q 011954 235 VHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDL-LFAIINS-VSR-GKGQDLFLHSFYESLQLIREKKLQVPSMHA 311 (474)
Q Consensus 235 i~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~-~i~~vgr-l~~-~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l 311 (474)
+.|+.-... .+... +...++.+ ++.++. +.+..|+ -.. .+....++++++++.+ ++|++++
T Consensus 158 VGHPl~d~~-~~~~~-------~~~~~~~~-l~~~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~-------~~p~l~f 221 (373)
T PF02684_consen 158 VGHPLLDEV-KPEPD-------RAEAREKL-LDPDKPIIALLPGSRKSEIKRLLPIFLEAAKLLKK-------QRPDLQF 221 (373)
T ss_pred ECCcchhhh-ccCCC-------HHHHHHhc-CCCCCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHH-------hCCCeEE
Confidence 888763322 22111 24455666 666654 4455553 222 4456777888887766 5699999
Q ss_pred EEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCCCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEc-CC
Q 011954 312 VVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGT-AA 390 (474)
Q Consensus 312 ~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s-~~ 390 (474)
++..... ...+.+++.....+....+.+ ...+-.+.|+.||+.+..| |.+.+|++.+|+|.|+. ..
T Consensus 222 vvp~a~~----~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~m~~ad~al~~S-------GTaTLE~Al~g~P~Vv~Yk~ 288 (373)
T PF02684_consen 222 VVPVAPE----VHEELIEEILAEYPPDVSIVI--IEGESYDAMAAADAALAAS-------GTATLEAALLGVPMVVAYKV 288 (373)
T ss_pred EEecCCH----HHHHHHHHHHHhhCCCCeEEE--cCCchHHHHHhCcchhhcC-------CHHHHHHHHhCCCEEEEEcC
Confidence 9887643 233345556555544323322 2357788999999999777 78999999999998765 21
Q ss_pred C----------------CcceeeeeCC-c-eeeecCCCCChHHHHHHHHHHhhCHHHHHHHH
Q 011954 391 G----------------GTMEIVVNGT-T-GLLHPTGKEGVTPLANNIVKLATHVERRLTMG 434 (474)
Q Consensus 391 ~----------------g~~e~v~~~~-~-G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~ 434 (474)
+ |++.++-+.+ . =++-+..+ ++.+++++..+++|++.++...
T Consensus 289 ~~lt~~iak~lvk~~~isL~Niia~~~v~PEliQ~~~~--~~~i~~~~~~ll~~~~~~~~~~ 348 (373)
T PF02684_consen 289 SPLTYFIAKRLVKVKYISLPNIIAGREVVPELIQEDAT--PENIAAELLELLENPEKRKKQK 348 (373)
T ss_pred cHHHHHHHHHhhcCCEeechhhhcCCCcchhhhcccCC--HHHHHHHHHHHhcCHHHHHHHH
Confidence 1 2333332211 0 11222334 8999999999999987644443
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process |
| >COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.4e-07 Score=87.52 Aligned_cols=347 Identities=17% Similarity=0.152 Sum_probs=191.8
Q ss_pred cccCEEEEEecCCCCCChh-HHHHHHHHHHHhcC-cEEEEEe-CC-CCCCchhh-hhhcccchhccceeee---------
Q 011954 72 MKSKLVLLVSHELSLSGGP-LLLMELAFLLRGVG-AEVVWIT-NQ-KPNEPDEV-IYSLEHKMLDRGVQVL--------- 137 (474)
Q Consensus 72 ~~~~kIl~v~~~~~~gG~~-~~~~~l~~~L~~~G-~~V~v~~-~~-~~~~~~~~-~~~~~~~~~~~~~~~~--------- 137 (474)
|.+|||++|...-+ | .-+.-+++++.+.+ .+..++. .+ .+.+-... ...+.-.-......+.
T Consensus 1 m~~~Kv~~I~GTRP----E~iKmapli~~~~~~~~~~~~vi~TGQH~d~em~~~~le~~~i~~pdy~L~i~~~~~tl~~~ 76 (383)
T COG0381 1 MKMLKVLTIFGTRP----EAIKMAPLVKALEKDPDFELIVIHTGQHRDYEMLDQVLELFGIRKPDYDLNIMKPGQTLGEI 76 (383)
T ss_pred CCceEEEEEEecCH----HHHHHhHHHHHHHhCCCCceEEEEecccccHHHHHHHHHHhCCCCCCcchhccccCCCHHHH
Confidence 56889999985321 2 34778889998876 6666555 32 21111111 0000000001111111
Q ss_pred ---ehhcHHHHhhhcCCCEEEEcccchhhHHhHHhhhcccccccceeeeeecccc--ccchhhhhhcccccccccccccc
Q 011954 138 ---SAKGEKAINTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRG--HYFKLEYVKHLPFVAGAMIDSYT 212 (474)
Q Consensus 138 ---~~~~~~~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~--~~~~~~~~~~~~~~~~~~~~s~~ 212 (474)
.......++...+||+|.+|.-....+...+.. .. ...|+..---+.+. .++.....+ .+...++...+
T Consensus 77 t~~~i~~~~~vl~~~kPD~VlVhGDT~t~lA~alaa-~~--~~IpV~HvEAGlRt~~~~~PEE~NR---~l~~~~S~~hf 150 (383)
T COG0381 77 TGNIIEGLSKVLEEEKPDLVLVHGDTNTTLAGALAA-FY--LKIPVGHVEAGLRTGDLYFPEEINR---RLTSHLSDLHF 150 (383)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCcchHHHHHHHH-HH--hCCceEEEecccccCCCCCcHHHHH---HHHHHhhhhhc
Confidence 112455667789999999987433332222111 11 11233222222211 112222222 22233333333
Q ss_pred cHHHHHHhHHHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHh-cCCCCCCEEEEEeccccc-CcchHHHHH
Q 011954 213 TAEYWKNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRES-LGVRDDDLLFAIINSVSR-GKGQDLFLH 290 (474)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~-~~~~~~~~~i~~vgrl~~-~Kg~~~ll~ 290 (474)
+.....+.-..+-|++.+++.|+.|.+ .+.+........ ........ ++...++++++..-|-+- .+++..+++
T Consensus 151 apte~ar~nLl~EG~~~~~IfvtGnt~-iDal~~~~~~~~---~~~~~~~~~~~~~~~~~iLvT~HRreN~~~~~~~i~~ 226 (383)
T COG0381 151 APTEIARKNLLREGVPEKRIFVTGNTV-IDALLNTRDRVL---EDSKILAKGLDDKDKKYILVTAHRRENVGEPLEEICE 226 (383)
T ss_pred CChHHHHHHHHHcCCCccceEEeCChH-HHHHHHHHhhhc---cchhhHHhhhccccCcEEEEEcchhhcccccHHHHHH
Confidence 333333333345699999999999976 333222211100 01112222 444455677777766554 388889999
Q ss_pred HHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHH-HHcCCCCeEEEecCC--CChHHHHhcCCEEEEcCCCC
Q 011954 291 SFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFV-AEKKIQDHVHFVNKT--LTVSPYLASIDVLVQNSQAR 367 (474)
Q Consensus 291 a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~-~~~~l~~~v~~~g~~--~~~~~~~~~adv~v~ps~~~ 367 (474)
++.++.+ +++++.++.--.. ...+++.. ..++-.++|.++.+. .+...++..|-+.+--|
T Consensus 227 al~~i~~-------~~~~~~viyp~H~-------~~~v~e~~~~~L~~~~~v~li~pl~~~~f~~L~~~a~~iltDS--- 289 (383)
T COG0381 227 ALREIAE-------EYPDVIVIYPVHP-------RPRVRELVLKRLKNVERVKLIDPLGYLDFHNLMKNAFLILTDS--- 289 (383)
T ss_pred HHHHHHH-------hCCCceEEEeCCC-------ChhhhHHHHHHhCCCCcEEEeCCcchHHHHHHHHhceEEEecC---
Confidence 9988877 4467766654432 23344444 556666779998875 67788888886666333
Q ss_pred CCCCchHHHHHHhcCCCEEEcCCC-CcceeeeeCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcC
Q 011954 368 GECFGRITIEAMAFQLPVLGTAAG-GTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRFL 446 (474)
Q Consensus 368 ~E~~~~~~~EAma~G~PvI~s~~~-g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~fs 446 (474)
|...=||-..|+||++-+.+ .-+|.+..| +-.++.. + .+.+.+++..++++++.+++|++.. ..|.
T Consensus 290 ----GgiqEEAp~lg~Pvl~lR~~TERPE~v~ag-t~~lvg~-~--~~~i~~~~~~ll~~~~~~~~m~~~~-----npYg 356 (383)
T COG0381 290 ----GGIQEEAPSLGKPVLVLRDTTERPEGVEAG-TNILVGT-D--EENILDAATELLEDEEFYERMSNAK-----NPYG 356 (383)
T ss_pred ----CchhhhHHhcCCcEEeeccCCCCccceecC-ceEEeCc-c--HHHHHHHHHHHhhChHHHHHHhccc-----CCCc
Confidence 44677999999999987644 557776433 4444443 3 7999999999999999998886643 3355
Q ss_pred HHHHHHHHHHHHHHHH
Q 011954 447 EHHMSQRIALVLREVL 462 (474)
Q Consensus 447 ~~~~~~~~~~~~~~~~ 462 (474)
-....+++.+++..-.
T Consensus 357 dg~as~rIv~~l~~~~ 372 (383)
T COG0381 357 DGNASERIVEILLNYF 372 (383)
T ss_pred CcchHHHHHHHHHHHh
Confidence 5555666666555443
|
|
| >PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A | Back alignment and domain information |
|---|
Probab=99.01 E-value=6.2e-10 Score=93.97 Aligned_cols=135 Identities=21% Similarity=0.145 Sum_probs=66.3
Q ss_pred CChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhcccchhccceeeee---------------hhcHHHHh--hhc
Q 011954 87 SGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEHKMLDRGVQVLS---------------AKGEKAIN--TAL 149 (474)
Q Consensus 87 gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~--~~~ 149 (474)
||+++++.+|+++|.+.||+|++++...+....+ ....++.+.. ...+..+. ...
T Consensus 1 GG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 72 (160)
T PF13579_consen 1 GGIERYVRELARALAARGHEVTVVTPQPDPEDDE--------EEEDGVRVHRLPLPRRPWPLRLLRFLRRLRRLLAARRE 72 (160)
T ss_dssp SHHHHHHHHHHHHHHHTT-EEEEEEE---GGG-S--------EEETTEEEEEE--S-SSSGGGHCCHHHHHHHHCHHCT-
T ss_pred CCHHHHHHHHHHHHHHCCCEEEEEecCCCCcccc--------cccCCceEEeccCCccchhhhhHHHHHHHHHHHhhhcc
Confidence 7889999999999999999999999655443211 1111222211 11233444 668
Q ss_pred CCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccccc---hh-----hhhhcccccccccccccccHHHHHHhH
Q 011954 150 NADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYF---KL-----EYVKHLPFVAGAMIDSYTTAEYWKNRT 221 (474)
Q Consensus 150 ~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~---~~-----~~~~~~~~~~~~~~~s~~~~~~~~~~~ 221 (474)
+||+||+|++..+ ++....+.. ...|++.++|+...... .. .....+..++.+++.|....+ .+
T Consensus 73 ~~Dvv~~~~~~~~-~~~~~~~~~---~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~----~l 144 (160)
T PF13579_consen 73 RPDVVHAHSPTAG-LVAALARRR---RGIPLVVTVHGTLFRRGSRWKRRLYRWLERRLLRRADRVIVVSEAMRR----YL 144 (160)
T ss_dssp --SEEEEEHHHHH-HHHHHHHHH---HT--EEEE-SS-T------HHHHHHHHHHHHHHHH-SEEEESSHHHHH----HH
T ss_pred CCeEEEecccchh-HHHHHHHHc---cCCcEEEEECCCchhhccchhhHHHHHHHHHHHhcCCEEEECCHHHHH----HH
Confidence 9999999985433 223322211 24689999998532211 11 112334555666655555544 44
Q ss_pred HHHhcCCCCCeEEEeCC
Q 011954 222 RERLGIRMPETYVVHLG 238 (474)
Q Consensus 222 ~~~~~~~~~ki~vi~ng 238 (474)
.+ +|++.+++.|||||
T Consensus 145 ~~-~g~~~~ri~vipnG 160 (160)
T PF13579_consen 145 RR-YGVPPDRIHVIPNG 160 (160)
T ss_dssp HH-H---GGGEEE----
T ss_pred HH-hCCCCCcEEEeCcC
Confidence 44 78888999999998
|
|
| >TIGR00661 MJ1255 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=98.84 E-value=7.6e-07 Score=84.52 Aligned_cols=80 Identities=13% Similarity=0.177 Sum_probs=58.8
Q ss_pred CCeEEEecCC-CChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCcce------eeeeCCceeeecCCC
Q 011954 338 QDHVHFVNKT-LTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTME------IVVNGTTGLLHPTGK 410 (474)
Q Consensus 338 ~~~v~~~g~~-~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~~e------~v~~~~~G~l~~~~d 410 (474)
.+++.+.++. +++.++|..||++|.-+ ...++.||+++|+|+|.....+..| .+.+...|...+..+
T Consensus 228 ~~~v~~~~~~~~~~~~~l~~ad~vI~~~------G~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l~~~~ 301 (321)
T TIGR00661 228 NENVEIRRITTDNFKELIKNAELVITHG------GFSLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIALEYKE 301 (321)
T ss_pred CCCEEEEECChHHHHHHHHhCCEEEECC------ChHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEEcChhh
Confidence 4689999987 58999999999999544 3357999999999999988776444 344556788877665
Q ss_pred CChHHHHHHHHHHhhC
Q 011954 411 EGVTPLANNIVKLATH 426 (474)
Q Consensus 411 ~~~~~la~~i~~ll~~ 426 (474)
. ++.+++...+++
T Consensus 302 --~-~~~~~~~~~~~~ 314 (321)
T TIGR00661 302 --L-RLLEAILDIRNM 314 (321)
T ss_pred --H-HHHHHHHhcccc
Confidence 5 555555554444
|
This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases. |
| >PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=98.80 E-value=2.5e-06 Score=84.70 Aligned_cols=318 Identities=12% Similarity=0.086 Sum_probs=169.2
Q ss_pred cCEEEEEecCCCCCChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhcc--cchhccce-ee-ee-------hhcH
Q 011954 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLE--HKMLDRGV-QV-LS-------AKGE 142 (474)
Q Consensus 74 ~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~--~~~~~~~~-~~-~~-------~~~~ 142 (474)
..||.++..+.+ |..+...|+++|+++.-++.+....++.........+. +.+.-.|+ .+ .. ....
T Consensus 226 ~~kIfI~AGE~S---GDlhgA~Li~aLk~~~P~i~~~GvGG~~M~aaG~e~l~d~~eLsVmG~~EVL~~l~~l~~~~~~l 302 (608)
T PRK01021 226 NTSCFISAGEHS---GDTLGGNLLKEIKALYPDIHCFGVGGPQMRAEGFHPLFNMEEFQVSGFWEVLLALFKLWYRYRKL 302 (608)
T ss_pred CCeEEEEecccc---HHHHHHHHHHHHHhcCCCcEEEEEccHHHHhCcCcccCChHHhhhhhHHHHHHHHHHHHHHHHHH
Confidence 457888776543 24778899999998877777776544322111000000 00000010 00 00 1122
Q ss_pred HHHhhhcCCCEEEEccc-chhhHHhHHhhhcccccccceeeeeeccccccchh---hhhhcccccccccccccccHHHHH
Q 011954 143 KAINTALNADLVVLNTA-VAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYFKL---EYVKHLPFVAGAMIDSYTTAEYWK 218 (474)
Q Consensus 143 ~~~~~~~~~DiV~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~---~~~~~~~~~~~~~~~s~~~~~~~~ 218 (474)
.......+||++++-+. .....+...+++. .+..|+++++- +..+.+ +..+.-+.+|...+...+=.++++
T Consensus 303 ~~~i~~~kPD~vIlID~PgFNlrLAK~lkk~--Gi~ipviyYVs---PqVWAWR~~Rikki~k~vD~ll~IfPFE~~~y~ 377 (608)
T PRK01021 303 YKTILKTNPRTVICIDFPDFHFLLIKKLRKR--GYKGKIVHYVC---PSIWAWRPKRKTILEKYLDLLLLILPFEQNLFK 377 (608)
T ss_pred HHHHHhcCCCEEEEeCCCCCCHHHHHHHHhc--CCCCCEEEEEC---ccceeeCcchHHHHHHHhhhheecCccCHHHHH
Confidence 23344589999998663 3333333333322 11136665554 222222 222233455666666666666655
Q ss_pred HhHHHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCC-EEEEEecc-ccc-CcchHHHHHHHHHH
Q 011954 219 NRTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDD-LLFAIINS-VSR-GKGQDLFLHSFYES 295 (474)
Q Consensus 219 ~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~i~~vgr-l~~-~Kg~~~ll~a~~~l 295 (474)
+ .| -+++.+.|+.-.. .....+ +++.++++|++++. .+-+..|. -.. .+..+.+++|++.
T Consensus 378 ~-----~g---v~v~yVGHPL~d~-i~~~~~-------~~~~r~~lgl~~~~~iIaLLPGSR~~EI~rllPv~l~aa~~- 440 (608)
T PRK01021 378 D-----SP---LRTVYLGHPLVET-ISSFSP-------NLSWKEQLHLPSDKPIVAAFPGSRRGDILRNLTIQVQAFLA- 440 (608)
T ss_pred h-----cC---CCeEEECCcHHhh-cccCCC-------HHHHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHH-
Confidence 3 34 3467777776322 211111 35668889997554 55556663 222 4466677777751
Q ss_pred HHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCCCChHHHHhcCCEEEEcCCCCCCCCchHH
Q 011954 296 LQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYLASIDVLVQNSQARGECFGRIT 375 (474)
Q Consensus 296 ~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv~v~ps~~~~E~~~~~~ 375 (474)
+.++ ++.++++....+ ...+.+++..+..+. -.+.+.... +-.+++++||+.+..| |.+.
T Consensus 441 -~~l~------~~l~fvvp~a~~----~~~~~i~~~~~~~~~-~~~~ii~~~-~~~~~m~aaD~aLaaS-------GTaT 500 (608)
T PRK01021 441 -SSLA------STHQLLVSSANP----KYDHLILEVLQQEGC-LHSHIVPSQ-FRYELMRECDCALAKC-------GTIV 500 (608)
T ss_pred -HHhc------cCeEEEEecCch----hhHHHHHHHHhhcCC-CCeEEecCc-chHHHHHhcCeeeecC-------CHHH
Confidence 1111 357887754332 134556666654331 022333221 2379999999999877 7899
Q ss_pred HHHHhcCCCEEEc-CCC------------------CcceeeeeCC-ceeee---cCCCCChHHHHHHHHHHhhCHHHHHH
Q 011954 376 IEAMAFQLPVLGT-AAG------------------GTMEIVVNGT-TGLLH---PTGKEGVTPLANNIVKLATHVERRLT 432 (474)
Q Consensus 376 ~EAma~G~PvI~s-~~~------------------g~~e~v~~~~-~G~l~---~~~d~~~~~la~~i~~ll~~~~~~~~ 432 (474)
+|++.+|+|.|+. ..+ +++.++.+.+ .--+. +.-+ ++.+++++ +++.|++.+++
T Consensus 501 LEaAL~g~PmVV~YK~s~Lty~Iak~Lvki~i~yIsLpNIIagr~VvPEllqgQ~~~t--pe~La~~l-~lL~d~~~r~~ 577 (608)
T PRK01021 501 LETALNQTPTIVTCQLRPFDTFLAKYIFKIILPAYSLPNIILGSTIFPEFIGGKKDFQ--PEEVAAAL-DILKTSQSKEK 577 (608)
T ss_pred HHHHHhCCCEEEEEecCHHHHHHHHHHHhccCCeeehhHHhcCCCcchhhcCCcccCC--HHHHHHHH-HHhcCHHHHHH
Confidence 9999999998874 222 2222222211 01112 2233 89999996 88888887777
Q ss_pred HHHHHHH
Q 011954 433 MGKKGYE 439 (474)
Q Consensus 433 ~~~~~~~ 439 (474)
+.+...+
T Consensus 578 ~~~~l~~ 584 (608)
T PRK01021 578 QKDACRD 584 (608)
T ss_pred HHHHHHH
Confidence 7665554
|
|
| >COG4641 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=98.73 E-value=1.2e-06 Score=80.76 Aligned_cols=326 Identities=12% Similarity=0.071 Sum_probs=184.6
Q ss_pred CChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhcccchhccceee-ee----hhcHHHHhhhcCCCEEEEcccc-
Q 011954 87 SGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEHKMLDRGVQV-LS----AKGEKAINTALNADLVVLNTAV- 160 (474)
Q Consensus 87 gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~DiV~~~~~~- 160 (474)
+|...+..-+.++|...||+|..+-+....... ........+... +. -.......+..++|+|.+....
T Consensus 14 ~~~~~~~~~~~~~l~~~g~kvlflE~~~~~~~k-----~rd~~~~~~~~~~~~~~~~e~~~~~~i~~fk~d~iv~~~~~~ 88 (373)
T COG4641 14 NGSAEYYRGLLRALKMDGMKVLFLESGDFWDYK-----NRDIDAEDGCTEAFYKDQPELESLLYIREFKPDIIVNMSGDD 88 (373)
T ss_pred CCchhhHHHHHHHHHhccceEEEEecccHHhhh-----cccccCccchhheeecCcHHHHHHHHHHhcCCcEEEEecccc
Confidence 455577888899999999999998754321100 011111111111 11 1122345567899999876522
Q ss_pred ------hhhHHhHHhhhcccccccceeeeeecccc--ccchh----hh-hhcccccccccccccccHHHHHHhHHHHhcC
Q 011954 161 ------AGKWLDGVLKDKVSQVLPKVLWWIHEMRG--HYFKL----EY-VKHLPFVAGAMIDSYTTAEYWKNRTRERLGI 227 (474)
Q Consensus 161 ------~~~~~~~~~~~~~~~~~~~~v~~~h~~~~--~~~~~----~~-~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 227 (474)
...+...+... ..|+++|.-+..- ..+.. .. ++.+.-.+.+++..... ....+.+..
T Consensus 89 ~~~~~~~~~~~a~l~~~-----~l~~~~w~te~p~~~~~~~~~~~~~~~~~~l~~fd~v~~~g~~l---~~~~yyq~~-- 158 (373)
T COG4641 89 QPDEESTIDLWAWLKRK-----CLPVIVWYTEDPYDTDIFSQVAEEQLARRPLFIFDNVLSFGGGL---VANKYYQEG-- 158 (373)
T ss_pred cccceehHHHHHHhhcC-----CcceEEEEeccchhhhhhhhhhHHHhhccccchhhhhhhccchH---HHHHHHHhh--
Confidence 12222222222 2244444333210 11111 11 01111111111111111 122222222
Q ss_pred CCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHHHHHHHHHHHHHHHHhccCCC
Q 011954 228 RMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVP 307 (474)
Q Consensus 228 ~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~ 307 (474)
-..+..-++.++|.+.|.+.+... .-..-+.++|+..+. ..+.+-+.+.+-...+ ..
T Consensus 159 ~~~~~~~~~~a~d~~~~~~i~~da----------------~~~~dL~~ign~~pD-r~e~~ke~~~~ps~kl------~v 215 (373)
T COG4641 159 GARNCYYLPWAVDDSLFHPIPPDA----------------SYDVDLNLIGNPYPD-RVEEIKEFFVEPSFKL------MV 215 (373)
T ss_pred cccceeccCccCCchhcccCCccc----------------cceeeeEEecCCCcc-HHHHHHHHhhccchhh------hc
Confidence 245688999999999998776321 122357778876554 2232322222211111 01
Q ss_pred cEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecC---CCChHHHHhcCCEEEEcCCCC-CCC---CchHHHHHHh
Q 011954 308 SMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNK---TLTVSPYLASIDVLVQNSQAR-GEC---FGRITIEAMA 380 (474)
Q Consensus 308 ~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~---~~~~~~~~~~adv~v~ps~~~-~E~---~~~~~~EAma 380 (474)
+-++...|..- ...+.. .--.+++...|+ ...+...+...|+.+.-++.. .++ +.+-+.|+|+
T Consensus 216 ~rr~~~~g~~y------~~~~~~----~~~~~~~~yIg~~~~~~~v~~~~~~~~~~~n~~r~~~~~~l~~~~~RvFeiag 285 (373)
T COG4641 216 DRRFYVLGPRY------PDDIWG----RTWEPNVQYIGYYNPKDGVPNAFKRDDVTLNINRASIANALFSPTNRVFEIAG 285 (373)
T ss_pred cceeeecCCcc------chhhhc----ccccchhhhhhccCccchhhhcccccceeeeecHHHHHhhcCCchhhHHHHhh
Confidence 34566666641 111111 111234555554 266888889999988754421 122 3678999999
Q ss_pred cCCCEEEcCCCCcceeeeeCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 011954 381 FQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRFLEHHMSQRIALVLRE 460 (474)
Q Consensus 381 ~G~PvI~s~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~ 460 (474)
||.|.|+....++.-.+.+|+.-++.. | ..++.+.+..++..++.++++++.+++++...|+.+.-+..+++....
T Consensus 286 c~~~liT~~~~~~e~~f~pgk~~iv~~--d--~kdl~~~~~yll~h~~erkeiae~~ye~V~~~ht~~~r~~~~~~~i~s 361 (373)
T COG4641 286 CGGFLITDYWKDLEKFFKPGKDIIVYQ--D--SKDLKEKLKYLLNHPDERKEIAECAYERVLARHTYEERIFKLLNEIAS 361 (373)
T ss_pred cCCccccccHHHHHHhcCCchheEEec--C--HHHHHHHHHHHhcCcchHHHHHHhhHHHHHHhccHHHHHHHHHHHHHH
Confidence 999999999888888887776555544 3 789999999999999999999999999999999999988888888877
Q ss_pred HHhh
Q 011954 461 VLQY 464 (474)
Q Consensus 461 ~~~~ 464 (474)
+...
T Consensus 362 I~~r 365 (373)
T COG4641 362 INIR 365 (373)
T ss_pred HHHh
Confidence 5443
|
|
| >COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.65 E-value=4.9e-06 Score=73.28 Aligned_cols=295 Identities=17% Similarity=0.136 Sum_probs=154.2
Q ss_pred CEEEEEecCCCC-CChh-HHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhcccchhccceeeeehhcHHHHhhhcCCC
Q 011954 75 KLVLLVSHELSL-SGGP-LLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEHKMLDRGVQVLSAKGEKAINTALNAD 152 (474)
Q Consensus 75 ~kIl~v~~~~~~-gG~~-~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 152 (474)
|||+|++....- |+|. .....||++|.+.|..+..++.+.... . +................ .++..++|
T Consensus 1 M~V~i~~Dgg~~iGmGHV~R~l~LA~~l~k~~~~~~fl~k~~~e~---~---~~~~~~~f~~~~~~~~n---~ik~~k~d 71 (318)
T COG3980 1 MKVLIRCDGGLEIGMGHVMRTLTLARELEKRGFACLFLTKQDIEA---I---IHKVYEGFKVLEGRGNN---LIKEEKFD 71 (318)
T ss_pred CcEEEEecCCcccCcchhhhHHHHHHHHHhcCceEEEecccchhh---h---hhhhhhhccceeeeccc---ccccccCC
Confidence 789999987544 5553 778899999999998888888654221 0 11111111111111111 55678999
Q ss_pred EEEEcccchhhHHhHHhhhcccccccceeeeeeccccccchhhhhhcccccccccccccccHHHHHHhHHHHhcCCCCCe
Q 011954 153 LVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYFKLEYVKHLPFVAGAMIDSYTTAEYWKNRTRERLGIRMPET 232 (474)
Q Consensus 153 iV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ki 232 (474)
+++.-+.....-.....+. ....+.+. +.+.....+. ..+.+ ...... -.+.++.-+.+.
T Consensus 72 ~lI~Dsygl~~dd~k~ik~---e~~~k~l~-fDd~~~~~~~--------d~d~i---vN~~~~-----a~~~y~~v~~k~ 131 (318)
T COG3980 72 LLIFDSYGLNADDFKLIKE---EAGSKILI-FDDENAKSFK--------DNDLI---VNAILN-----ANDYYGLVPNKT 131 (318)
T ss_pred EEEEeccCCCHHHHHHHHH---HhCCcEEE-ecCCCccchh--------hhHhh---hhhhhc-----chhhccccCcce
Confidence 9998763322211111110 01123332 2222121111 11111 111111 111334444443
Q ss_pred EEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHHHHHHHHHHHHHHHHhccCCCcEEEE
Q 011954 233 YVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAV 312 (474)
Q Consensus 233 ~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~ 312 (474)
-++-|.+.-...+..... +++..++ +.+-+++..|. +..|| +.++.++.|.+ .++.+.
T Consensus 132 -~~~lGp~y~~lr~eF~~~-----r~~~~~r----~~r~ilI~lGG-sDpk~--lt~kvl~~L~~---------~~~nl~ 189 (318)
T COG3980 132 -RYYLGPGYAPLRPEFYAL-----REENTER----PKRDILITLGG-SDPKN--LTLKVLAELEQ---------KNVNLH 189 (318)
T ss_pred -EEEecCCceeccHHHHHh-----HHHHhhc----chheEEEEccC-CChhh--hHHHHHHHhhc---------cCeeEE
Confidence 345565544433322111 2222222 22334455664 34454 46677777744 334444
Q ss_pred -EEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCCCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEE----
Q 011954 313 -VVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLG---- 387 (474)
Q Consensus 313 -i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~---- 387 (474)
++|++.+ ....+++.++++ +++.+.-..++|+.++..||..+.. -|.++.||...|+|.++
T Consensus 190 iV~gs~~p----~l~~l~k~~~~~---~~i~~~~~~~dma~LMke~d~aI~A-------aGstlyEa~~lgvP~l~l~~a 255 (318)
T COG3980 190 IVVGSSNP----TLKNLRKRAEKY---PNINLYIDTNDMAELMKEADLAISA-------AGSTLYEALLLGVPSLVLPLA 255 (318)
T ss_pred EEecCCCc----chhHHHHHHhhC---CCeeeEecchhHHHHHHhcchheec-------cchHHHHHHHhcCCceEEeee
Confidence 4454431 345555555554 6899999999999999999999943 37899999999999432
Q ss_pred cCCCCcceeeeeCCceeeecCC--CCChHHHHHHHHHHhhCHHHHHHHHHHH
Q 011954 388 TAAGGTMEIVVNGTTGLLHPTG--KEGVTPLANNIVKLATHVERRLTMGKKG 437 (474)
Q Consensus 388 s~~~g~~e~v~~~~~G~l~~~~--d~~~~~la~~i~~ll~~~~~~~~~~~~~ 437 (474)
.+.-...... ..-|.....+ .. .+.....+.++.+|+..++.+....
T Consensus 256 ~NQ~~~a~~f--~~lg~~~~l~~~l~-~~~~~~~~~~i~~d~~~rk~l~~~~ 304 (318)
T COG3980 256 ENQIATAKEF--EALGIIKQLGYHLK-DLAKDYEILQIQKDYARRKNLSFGS 304 (318)
T ss_pred ccHHHHHHHH--HhcCchhhccCCCc-hHHHHHHHHHhhhCHHHhhhhhhcc
Confidence 2322221111 1122222221 10 4678888888888998887765543
|
|
| >PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases | Back alignment and domain information |
|---|
Probab=98.65 E-value=5.7e-07 Score=76.08 Aligned_cols=152 Identities=16% Similarity=0.161 Sum_probs=90.7
Q ss_pred cCEEEEEecCCC---CCChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhcccchhccceeeeehh----------
Q 011954 74 SKLVLLVSHELS---LSGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEHKMLDRGVQVLSAK---------- 140 (474)
Q Consensus 74 ~~kIl~v~~~~~---~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 140 (474)
|+||+++....- .||-|+++.+|+..|.++|++|+|.|.......... .-.|+.++..+
T Consensus 1 mkkIaIiGtrGIPa~YGGfET~ve~L~~~l~~~g~~v~Vyc~~~~~~~~~~--------~y~gv~l~~i~~~~~g~~~si 72 (185)
T PF09314_consen 1 MKKIAIIGTRGIPARYGGFETFVEELAPRLVSKGIDVTVYCRSDYYPYKEF--------EYNGVRLVYIPAPKNGSAESI 72 (185)
T ss_pred CceEEEEeCCCCCcccCcHHHHHHHHHHHHhcCCceEEEEEccCCCCCCCc--------ccCCeEEEEeCCCCCCchHHH
Confidence 578999998733 388899999999999999999999996543321111 11122221111
Q ss_pred -----cHHHHh---h--hcCCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccccchh-----hh-----hhcc
Q 011954 141 -----GEKAIN---T--ALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYFKL-----EY-----VKHL 200 (474)
Q Consensus 141 -----~~~~~~---~--~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~-----~~-----~~~~ 200 (474)
.+.... + ..+.|+|+++....+.++....+. +.....+++..+|+..-...++ .+ ....
T Consensus 73 ~yd~~sl~~al~~~~~~~~~~~ii~ilg~~~g~~~~~~~r~-~~~~g~~v~vN~DGlEWkR~KW~~~~k~~lk~~E~~av 151 (185)
T PF09314_consen 73 IYDFLSLLHALRFIKQDKIKYDIILILGYGIGPFFLPFLRK-LRKKGGKVVVNMDGLEWKRAKWGRPAKKYLKFSEKLAV 151 (185)
T ss_pred HHHHHHHHHHHHHHhhccccCCEEEEEcCCccHHHHHHHHh-hhhcCCcEEECCCcchhhhhhcCHHHHHHHHHHHHHHH
Confidence 111111 1 136889998876544333333322 2223347777787653222111 11 1223
Q ss_pred cccccccccccccHHHHHHhHHHHhcCCCCCeEEEeCCCC
Q 011954 201 PFVAGAMIDSYTTAEYWKNRTRERLGIRMPETYVVHLGNS 240 (474)
Q Consensus 201 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ki~vi~ngvd 240 (474)
+..+..++++..+.+++++. |+ ..+..+|++|.|
T Consensus 152 k~ad~lIaDs~~I~~y~~~~----y~--~~~s~~IaYGad 185 (185)
T PF09314_consen 152 KYADRLIADSKGIQDYIKER----YG--RKKSTFIAYGAD 185 (185)
T ss_pred HhCCEEEEcCHHHHHHHHHH----cC--CCCcEEecCCCC
Confidence 56777888888888877664 54 467899999976
|
|
| >PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria | Back alignment and domain information |
|---|
Probab=98.60 E-value=3.8e-06 Score=81.51 Aligned_cols=304 Identities=13% Similarity=0.175 Sum_probs=143.2
Q ss_pred cCEEEEEecCC-CCCChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhcccchhccceeeeehhcHHHHhhhcCCC
Q 011954 74 SKLVLLVSHEL-SLSGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEHKMLDRGVQVLSAKGEKAINTALNAD 152 (474)
Q Consensus 74 ~~kIl~v~~~~-~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 152 (474)
+++|++.+... ..++-.+.+.+... -...++++.+++..... .....+..++.....+.+....+..
T Consensus 13 ~~~Ivf~~~~g~~~~dN~~~l~~~l~-~~~~~~~~~~~~~~~~~-----------~~~~~~~~~v~~~s~~~~~~~~~Ak 80 (369)
T PF04464_consen 13 KKKIVFESESGNKFSDNPKALFEYLI-KNYPDYKIYWIINKKSP-----------ELKPKGIKVVKFGSLKHIYYLARAK 80 (369)
T ss_dssp EEEEEEEBTTTTBS-HHHHHHHHHHH-HH-TTSEEEEEESSGGG---------------SS-EEEETTSHHHHHHHHHEE
T ss_pred CCEEEEEECCCCCCCCCHHHHHHHHH-hhCCCcEEEEEEcCchH-----------hhccCCceEEeecHHHHHHHHHhCc
Confidence 56788887532 22333444444333 12456788888865321 2234456666666666666667788
Q ss_pred EEEEcccchhhHHhHHhhhcccccccceeeeeeccccccchh----------hhhhcccccccccccccccHHHHHHhHH
Q 011954 153 LVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYFKL----------EYVKHLPFVAGAMIDSYTTAEYWKNRTR 222 (474)
Q Consensus 153 iV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~----------~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 222 (474)
++++++......... .....+++...|+........ .........+.+++.|... .+.+.
T Consensus 81 ~~i~~~~~~~~~~~~------~~~~~~~i~lwHG~~~K~~g~~~~~~~~~~~~~~~~~~~~d~~~~~s~~~----~~~~~ 150 (369)
T PF04464_consen 81 YIISDSYFPDLIYFK------KRKNQKYIQLWHGIPLKKIGYDSPDNKNYRKNYKRNYRNYDYFIVSSEFE----KEIFK 150 (369)
T ss_dssp EEEESS---T--TS---------TTSEEEE--SS--SB--GGG-S---TS-HHHHHHHTT-SEEEESSHHH----HHHHH
T ss_pred EEEECCCCCcccccc------cCCCcEEEEecCCCcccccchhccccccchhhhhhhccCCcEEEECCHHH----HHHHH
Confidence 888885333211111 112357888889862211111 1222334555555555544 44445
Q ss_pred HHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcch------HHHHHHHHHHH
Q 011954 223 ERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQ------DLFLHSFYESL 296 (474)
Q Consensus 223 ~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~------~~ll~a~~~l~ 296 (474)
+.++.+.+++. ..|......-..... ..++.+++.++++.++.+|+|+-.+...... ...++ +.++.
T Consensus 151 ~~f~~~~~~i~--~~G~PR~D~l~~~~~----~~~~~i~~~~~~~~~~k~ILyaPT~R~~~~~~~~~~~~~~~~-~~~l~ 223 (369)
T PF04464_consen 151 KAFGYPEDKIL--VTGYPRNDYLFNKSK----ENRNRIKKKLGIDKDKKVILYAPTWRDNSSNEYFKFFFSDLD-FEKLN 223 (369)
T ss_dssp HHTT--GGGEE--ES--GGGHHHHHSTT-----HHHHHHHHTT--SS-EEEEEE----GGG--GGSS----TT--HHHHH
T ss_pred HHhccCcceEE--EeCCCeEhHHhccCH----HHHHHHHHHhccCCCCcEEEEeeccccccccccccccccccC-HHHHH
Confidence 56777766544 455533221111111 1156788899999888899998544332211 11222 22221
Q ss_pred HHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCCCChHHHHhcCCEEEEcCCCCCCCCchHHH
Q 011954 297 QLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYLASIDVLVQNSQARGECFGRITI 376 (474)
Q Consensus 297 ~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv~v~ps~~~~E~~~~~~~ 376 (474)
.+ ...++.+++-.-.. ........ ....++|.+.....++.+++..||++|. + ++-++.
T Consensus 224 -~~-----~~~~~~li~k~Hp~-----~~~~~~~~---~~~~~~i~~~~~~~~~~~ll~~aDiLIT------D-ySSi~f 282 (369)
T PF04464_consen 224 -FL-----LKNNYVLIIKPHPN-----MKKKFKDF---KEDNSNIIFVSDNEDIYDLLAAADILIT------D-YSSIIF 282 (369)
T ss_dssp -HH-----HTTTEEEEE--SHH-----HHTT-------TT-TTTEEE-TT-S-HHHHHHT-SEEEE------S-S-THHH
T ss_pred -HH-----hCCCcEEEEEeCch-----hhhchhhh---hccCCcEEECCCCCCHHHHHHhcCEEEE------e-chhHHH
Confidence 11 12688887776531 11111111 3334688888877899999999999993 2 355899
Q ss_pred HHHhcCCCEEEc--CCC-------CcceeeeeCCceeeecCCCCChHHHHHHHHHHhhCHHHHHH
Q 011954 377 EAMAFQLPVLGT--AAG-------GTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLT 432 (474)
Q Consensus 377 EAma~G~PvI~s--~~~-------g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~ 432 (474)
|++.+++|||.. |.. ...+ ..+...|-.+. + .++|.++|..++++++..++
T Consensus 283 D~~~l~KPiify~~D~~~Y~~~rg~~~~-~~~~~pg~~~~--~--~~eL~~~i~~~~~~~~~~~~ 342 (369)
T PF04464_consen 283 DFLLLNKPIIFYQPDLEEYEKERGFYFD-YEEDLPGPIVY--N--FEELIEAIENIIENPDEYKE 342 (369)
T ss_dssp HHGGGT--EEEE-TTTTTTTTTSSBSS--TTTSSSS-EES--S--HHHHHHHHTTHHHHHHHTHH
T ss_pred HHHHhCCCEEEEeccHHHHhhccCCCCc-hHhhCCCceeC--C--HHHHHHHHHhhhhCCHHHHH
Confidence 999999999954 321 1112 11222344443 2 79999999998876654433
|
They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D. |
| >TIGR01426 MGT glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Probab=98.55 E-value=2.1e-06 Score=84.14 Aligned_cols=114 Identities=12% Similarity=0.117 Sum_probs=79.3
Q ss_pred CCCeEEEecCCCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCcc----eeeeeCCceeeecCCCCC
Q 011954 337 IQDHVHFVNKTLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTM----EIVVNGTTGLLHPTGKEG 412 (474)
Q Consensus 337 l~~~v~~~g~~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~~----e~v~~~~~G~l~~~~d~~ 412 (474)
+.+++.+.++... .+++..||++|..+ ...+++||+++|+|+|+....+-. +.+.+...|..+...+.+
T Consensus 273 ~~~~v~~~~~~p~-~~ll~~~~~~I~hg------G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~g~g~~l~~~~~~ 345 (392)
T TIGR01426 273 LPPNVEVRQWVPQ-LEILKKADAFITHG------GMNSTMEALFNGVPMVAVPQGADQPMTARRIAELGLGRHLPPEEVT 345 (392)
T ss_pred CCCCeEEeCCCCH-HHHHhhCCEEEECC------CchHHHHHHHhCCCEEecCCcccHHHHHHHHHHCCCEEEeccccCC
Confidence 3578999998754 58899999999543 245899999999999997654322 234444567776654333
Q ss_pred hHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 011954 413 VTPLANNIVKLATHVERRLTMGKKGYERVKDRFLEHHMSQRIALVL 458 (474)
Q Consensus 413 ~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~ 458 (474)
.++++++|.++++|++.++++.+- ++.+...-..+..++.+++++
T Consensus 346 ~~~l~~ai~~~l~~~~~~~~~~~l-~~~~~~~~~~~~aa~~i~~~~ 390 (392)
T TIGR01426 346 AEKLREAVLAVLSDPRYAERLRKM-RAEIREAGGARRAADEIEGFL 390 (392)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHH-HHHHHHcCCHHHHHHHHHHhh
Confidence 789999999999998866666443 333444456666666665543
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. |
| >PRK14089 ipid-A-disaccharide synthase; Provisional | Back alignment and domain information |
|---|
Probab=98.54 E-value=7.2e-06 Score=77.51 Aligned_cols=247 Identities=14% Similarity=0.046 Sum_probs=123.9
Q ss_pred cCEEEEEecCCCCCChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhcccchhccce-ee-eehhcHHHH-----h
Q 011954 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEHKMLDRGV-QV-LSAKGEKAI-----N 146 (474)
Q Consensus 74 ~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~-----~ 146 (474)
||||.++..+.+ |..+...|+++|++ ++.++...++.. .+...... .+.-.|+ .+ ..+..+++. .
T Consensus 1 ~~~i~i~aGE~S---GD~~ga~l~~~l~~---~~~~~G~GG~~m-~~~~~~~~-~lsv~G~~evl~~~~~~~~~~~~~~~ 72 (347)
T PRK14089 1 MMKILVSALEPS---ANLHLKELLKNLPK---DYELIGIFDKSL-GNPLYDSR-EFSIMGFVDVLPKLFFAKKAIKEMVE 72 (347)
T ss_pred CcEEEEEecccc---HHHHHHHHHHHHhc---CCEEEEEechHH-HHhcCChH-HhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 468988886553 24677888999987 555555433322 11000000 0000010 00 001111111 1
Q ss_pred hhcCCCEEEEccc-chhhHHhHHhhhcccccccceeeeeeccccccchh---hhhhcccccccccccccccHHHHHHhHH
Q 011954 147 TALNADLVVLNTA-VAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYFKL---EYVKHLPFVAGAMIDSYTTAEYWKNRTR 222 (474)
Q Consensus 147 ~~~~~DiV~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~---~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 222 (474)
...+||+++.-+. .....+...++...+ ..|+++++- +..+.+ +.....+.++...+...+=.++
T Consensus 73 ~~~~pd~~i~iD~p~Fnl~lak~~k~~~~--~i~viyyi~---PqvWAWr~~R~~~i~k~~d~vl~ifPFE~~~------ 141 (347)
T PRK14089 73 LAKQADKVLLMDSSSFNIPLAKKIKKAYP--KKEIIYYIL---PQVWAWKKGRAKILEKYCDFLASILPFEVQF------ 141 (347)
T ss_pred HhcCCCEEEEeCCCCCCHHHHHHHHhcCC--CCCEEEEEC---ccceeeCcchHHHHHHHHhhhhccCCCCHHH------
Confidence 1379999988653 334444444443321 246665554 222222 1222223444443333222222
Q ss_pred HHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEeccccc--CcchHHHHHHHHHHHHHHH
Q 011954 223 ERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSR--GKGQDLFLHSFYESLQLIR 300 (474)
Q Consensus 223 ~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~--~Kg~~~ll~a~~~l~~~~~ 300 (474)
|| .++.++.|++-.. .... +.. +++++.+.++.|+-.. .+-+..+++++.++.+
T Consensus 142 --yg---~~~~~VGhPl~d~-~~~~-------------~~~--~~~~~~I~llPGSR~~Ei~~llP~~~~aa~~L~~--- 197 (347)
T PRK14089 142 --YQ---SKATYVGHPLLDE-IKEF-------------KKD--LDKEGTIAFMPGSRKSEIKRLMPIFKELAKKLEG--- 197 (347)
T ss_pred --hC---CCCEEECCcHHHh-hhhh-------------hhh--cCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHhh---
Confidence 22 3466777775322 1110 111 2334556666664321 3445556667666643
Q ss_pred HhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCCCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHh
Q 011954 301 EKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYLASIDVLVQNSQARGECFGRITIEAMA 380 (474)
Q Consensus 301 ~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma 380 (474)
+ ...+++.|... .+.+++...+. ..+.+.+ +..++|+.||+.+..| |.+.+|++.
T Consensus 198 ----~--~~~~~i~~a~~------~~~i~~~~~~~---~~~~~~~---~~~~~m~~aDlal~~S-------GT~TLE~al 252 (347)
T PRK14089 198 ----K--EKILVVPSFFK------GKDLKEIYGDI---SEFEISY---DTHKALLEAEFAFICS-------GTATLEAAL 252 (347)
T ss_pred ----c--CcEEEEeCCCc------HHHHHHHHhcC---CCcEEec---cHHHHHHhhhHHHhcC-------cHHHHHHHH
Confidence 2 26788887652 24555544432 2344443 6688999999999766 678889999
Q ss_pred cCCCEEEc
Q 011954 381 FQLPVLGT 388 (474)
Q Consensus 381 ~G~PvI~s 388 (474)
+|+|.|..
T Consensus 253 ~g~P~Vv~ 260 (347)
T PRK14089 253 IGTPFVLA 260 (347)
T ss_pred hCCCEEEE
Confidence 99999875
|
|
| >COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.53 E-value=9.6e-06 Score=78.98 Aligned_cols=158 Identities=14% Similarity=0.119 Sum_probs=98.7
Q ss_pred CCEEEEEecccccCcchHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCCC
Q 011954 269 DDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTL 348 (474)
Q Consensus 269 ~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~ 348 (474)
.+++.+..|..... ..+++.+-+... .-+.++++...+. .. ..-++++|+...++..
T Consensus 237 ~~~vyvslGt~~~~---~~l~~~~~~a~~--------~l~~~vi~~~~~~------~~------~~~~~p~n~~v~~~~p 293 (406)
T COG1819 237 RPIVYVSLGTVGNA---VELLAIVLEALA--------DLDVRVIVSLGGA------RD------TLVNVPDNVIVADYVP 293 (406)
T ss_pred CCeEEEEcCCcccH---HHHHHHHHHHHh--------cCCcEEEEecccc------cc------ccccCCCceEEecCCC
Confidence 34555556655433 333333333322 1467777777541 00 1235567888888873
Q ss_pred ChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCC----cceeeeeCCceeeecCCCCChHHHHHHHHHHh
Q 011954 349 TVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGG----TMEIVVNGTTGLLHPTGKEGVTPLANNIVKLA 424 (474)
Q Consensus 349 ~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g----~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll 424 (474)
...++..||++|.. |.-.++.||+.+|+|+|+-..+. ..+-+++-..|...+......+.++++|.+++
T Consensus 294 -~~~~l~~ad~vI~h------GG~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~G~G~~l~~~~l~~~~l~~av~~vL 366 (406)
T COG1819 294 -QLELLPRADAVIHH------GGAGTTSEALYAGVPLVVIPDGADQPLNAERVEELGAGIALPFEELTEERLRAAVNEVL 366 (406)
T ss_pred -HHHHhhhcCEEEec------CCcchHHHHHHcCCCEEEecCCcchhHHHHHHHHcCCceecCcccCCHHHHHHHHHHHh
Confidence 35699999999954 34568999999999999886553 23445566788887743323899999999999
Q ss_pred hCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 011954 425 THVERRLTMGKKGYERVKDRFLEHHMSQRIALV 457 (474)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~ 457 (474)
+|+..++...+. .+.+.+.-..+++++.+++.
T Consensus 367 ~~~~~~~~~~~~-~~~~~~~~g~~~~a~~le~~ 398 (406)
T COG1819 367 ADDSYRRAAERL-AEEFKEEDGPAKAADLLEEF 398 (406)
T ss_pred cCHHHHHHHHHH-HHHhhhcccHHHHHHHHHHH
Confidence 988766655443 33344434444444444443
|
|
| >PRK02797 4-alpha-L-fucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.47 E-value=1.2e-05 Score=72.65 Aligned_cols=173 Identities=13% Similarity=0.075 Sum_probs=117.0
Q ss_pred CCCEEEEEecccccCcchHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecC-
Q 011954 268 DDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNK- 346 (474)
Q Consensus 268 ~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~- 346 (474)
.++..|+.-.+-++.-++..+++++.+.. ..++++++-=+-|..+.+|.+++++.++++--.+++..+-.
T Consensus 144 ~~~~tIlvGNSgd~SN~Hie~L~~l~~~~---------~~~v~ii~PlsYp~gn~~Yi~~V~~~~~~lF~~~~~~~L~e~ 214 (322)
T PRK02797 144 AGKMTILVGNSGDRSNRHIEALRALHQQF---------GDNVKIIVPMGYPANNQAYIEEVRQAGLALFGAENFQILTEK 214 (322)
T ss_pred CCceEEEEeCCCCCcccHHHHHHHHHHHh---------CCCeEEEEECCcCCCCHHHHHHHHHHHHHhcCcccEEehhhh
Confidence 34566653344456677888888776653 37888887766655556799999999998876578887764
Q ss_pred --CCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcC-CCCcceeeeeCCceeeecCCCCChHHHHHHHHHH
Q 011954 347 --TLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTA-AGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKL 423 (474)
Q Consensus 347 --~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~-~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~l 423 (474)
-++..++++.||+.++.-. +.+|.|+.++ .+.+|+||+.+. ++-..++.+.+ .-++++.++ |-.++.
T Consensus 215 l~f~eYl~lL~~~Dl~~f~~~-RQQgiGnl~l-Li~~G~~v~l~r~n~fwqdl~e~g-v~Vlf~~d~-----L~~~~v-- 284 (322)
T PRK02797 215 LPFDDYLALLRQCDLGYFIFA-RQQGIGTLCL-LIQLGKPVVLSRDNPFWQDLTEQG-LPVLFTGDD-----LDEDIV-- 284 (322)
T ss_pred CCHHHHHHHHHhCCEEEEeec-hhhHHhHHHH-HHHCCCcEEEecCCchHHHHHhCC-CeEEecCCc-----ccHHHH--
Confidence 3788999999999988765 3788886555 899999998875 55556665433 333344332 222211
Q ss_pred hhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhh
Q 011954 424 ATHVERRLTMGKKGYERVKDRFLEHHMSQRIALVLREVLQY 464 (474)
Q Consensus 424 l~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~~ 464 (474)
.+..+++....++.+. |+.+.+.+.|.++|+....+
T Consensus 285 ---~e~~rql~~~dk~~I~--Ff~pn~~~~W~~~l~~~~g~ 320 (322)
T PRK02797 285 ---REAQRQLASVDKNIIA--FFSPNYLQGWRNALAIAAGE 320 (322)
T ss_pred ---HHHHHHHHhhCcceee--ecCHhHHHHHHHHHHHhhCC
Confidence 1223444444454444 99999999999999877543
|
|
| >PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 | Back alignment and domain information |
|---|
Probab=98.43 E-value=5e-06 Score=79.23 Aligned_cols=272 Identities=13% Similarity=0.082 Sum_probs=132.7
Q ss_pred HHHHhhhcCCCEEEEcccchhhHHhHHhhhcccccccceeeeeecc-ccc-----cchhhhhhcccccccccccccccHH
Q 011954 142 EKAINTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEM-RGH-----YFKLEYVKHLPFVAGAMIDSYTTAE 215 (474)
Q Consensus 142 ~~~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~-~~~-----~~~~~~~~~~~~~~~~~~~s~~~~~ 215 (474)
+..++...+||+|+++.-....+...+.... ...|+ .++|.- +.. ......+..+.++.. ...+..+
T Consensus 59 ~~~~~~~~~Pd~Vlv~GD~~~~la~alaA~~---~~ipv-~HieaGlRs~d~~~g~~de~~R~~i~~la~---lhf~~t~ 131 (346)
T PF02350_consen 59 LADVLEREKPDAVLVLGDRNEALAAALAAFY---LNIPV-AHIEAGLRSGDRTEGMPDEINRHAIDKLAH---LHFAPTE 131 (346)
T ss_dssp HHHHHHHHT-SEEEEETTSHHHHHHHHHHHH---TT-EE-EEES-----S-TTSSTTHHHHHHHHHHH-S---EEEESSH
T ss_pred HHHHHHhcCCCEEEEEcCCchHHHHHHHHHH---hCCCE-EEecCCCCccccCCCCchhhhhhhhhhhhh---hhccCCH
Confidence 4556667899999998744333332222221 12353 334432 111 111222222222211 1222223
Q ss_pred HHHHhHHHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHH-HHhc-CCCCCCEEEEEecccccC---cchHHHHH
Q 011954 216 YWKNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHV-RESL-GVRDDDLLFAIINSVSRG---KGQDLFLH 290 (474)
Q Consensus 216 ~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~-r~~~-~~~~~~~~i~~vgrl~~~---Kg~~~ll~ 290 (474)
..++++. +.|+++.+|+++.|..-... ....... .+.+ ...+ ....++++++..=+.+.. .....+.+
T Consensus 132 ~~~~~L~-~~G~~~~rI~~vG~~~~D~l-~~~~~~~-----~~~~~~~~i~~~~~~~~iLvt~H~~t~~~~~~~~~~i~~ 204 (346)
T PF02350_consen 132 EARERLL-QEGEPPERIFVVGNPGIDAL-LQNKEEI-----EEKYKNSGILQDAPKPYILVTLHPVTNEDNPERLEQILE 204 (346)
T ss_dssp HHHHHHH-HTT--GGGEEE---HHHHHH-HHHHHTT-----CC-HHHHHHHHCTTSEEEEEE-S-CCCCTHH--HHHHHH
T ss_pred HHHHHHH-hcCCCCCeEEEEChHHHHHH-HHhHHHH-----hhhhhhHHHHhccCCCEEEEEeCcchhcCChHHHHHHHH
Confidence 3333333 46999999999988652222 1111000 0011 1111 114556666666444332 34556666
Q ss_pred HHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCC--CChHHHHhcCCEEEEcCCCCC
Q 011954 291 SFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKT--LTVSPYLASIDVLVQNSQARG 368 (474)
Q Consensus 291 a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~--~~~~~~~~~adv~v~ps~~~~ 368 (474)
++..+.+. +++.+++.....+ .....+.+...++ +++++..+. .++..+++.|+++|--|
T Consensus 205 ~l~~L~~~--------~~~~vi~~~hn~p---~~~~~i~~~l~~~---~~v~~~~~l~~~~~l~ll~~a~~vvgdS---- 266 (346)
T PF02350_consen 205 ALKALAER--------QNVPVIFPLHNNP---RGSDIIIEKLKKY---DNVRLIEPLGYEEYLSLLKNADLVVGDS---- 266 (346)
T ss_dssp HHHHHHHH--------TTEEEEEE--S-H---HHHHHHHHHHTT----TTEEEE----HHHHHHHHHHESEEEESS----
T ss_pred HHHHHHhc--------CCCcEEEEecCCc---hHHHHHHHHhccc---CCEEEECCCCHHHHHHHHhcceEEEEcC----
Confidence 66666542 5788888876321 2455665555555 388888864 78899999999999544
Q ss_pred CCCchHHH-HHHhcCCCEEEcCCCC-cceeeeeCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcC
Q 011954 369 ECFGRITI-EAMAFQLPVLGTAAGG-TMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRFL 446 (474)
Q Consensus 369 E~~~~~~~-EAma~G~PvI~s~~~g-~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~fs 446 (474)
| .+. ||..+|+|||.-...| -++.+..+. ..++. .+ .+++.++|.+++++++.+..+.. ...-|.
T Consensus 267 ---s-GI~eEa~~lg~P~v~iR~~geRqe~r~~~~-nvlv~-~~--~~~I~~ai~~~l~~~~~~~~~~~-----~~npYg 333 (346)
T PF02350_consen 267 ---S-GIQEEAPSLGKPVVNIRDSGERQEGRERGS-NVLVG-TD--PEAIIQAIEKALSDKDFYRKLKN-----RPNPYG 333 (346)
T ss_dssp ---H-HHHHHGGGGT--EEECSSS-S-HHHHHTTS-EEEET-SS--HHHHHHHHHHHHH-HHHHHHHHC-----S--TT-
T ss_pred ---c-cHHHHHHHhCCeEEEecCCCCCHHHHhhcc-eEEeC-CC--HHHHHHHHHHHHhChHHHHhhcc-----CCCCCC
Confidence 3 456 9999999999985444 466655554 44466 44 89999999999987555444422 112355
Q ss_pred HHHHHHHHHHHH
Q 011954 447 EHHMSQRIALVL 458 (474)
Q Consensus 447 ~~~~~~~~~~~~ 458 (474)
-...++++.+++
T Consensus 334 dG~as~rI~~~L 345 (346)
T PF02350_consen 334 DGNASERIVEIL 345 (346)
T ss_dssp SS-HHHHHHHHH
T ss_pred CCcHHHHHHHhh
Confidence 555566665554
|
1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C. |
| >COG1817 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=98.41 E-value=0.0001 Score=66.16 Aligned_cols=270 Identities=12% Similarity=0.100 Sum_probs=147.9
Q ss_pred HHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhcccchhccceeeeeh-------------------hcHHHHhhhcCC
Q 011954 91 LLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEHKMLDRGVQVLSA-------------------KGEKAINTALNA 151 (474)
Q Consensus 91 ~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~ 151 (474)
.+..++...|.++||+|.+.|...+. +.+.+...|++.... ..+.++....+|
T Consensus 14 hfFk~lI~elekkG~ev~iT~rd~~~--------v~~LLd~ygf~~~~Igk~g~~tl~~Kl~~~~eR~~~L~ki~~~~kp 85 (346)
T COG1817 14 HFFKNLIWELEKKGHEVLITCRDFGV--------VTELLDLYGFPYKSIGKHGGVTLKEKLLESAERVYKLSKIIAEFKP 85 (346)
T ss_pred hHHHHHHHHHHhCCeEEEEEEeecCc--------HHHHHHHhCCCeEeecccCCccHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 67899999999999999999966554 233333333332211 123355566899
Q ss_pred CEEEE-cccchhhHHhHHhhhcccccccceeeeeeccccccchhhhhhcccccccccccccccHHHHHHhHHHHhcCCCC
Q 011954 152 DLVVL-NTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYFKLEYVKHLPFVAGAMIDSYTTAEYWKNRTRERLGIRMP 230 (474)
Q Consensus 152 DiV~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 230 (474)
|+.+. |++..... .+. ++.+.+....+.+.. ......++.++.++.....-...+. .+|..+.
T Consensus 86 dv~i~~~s~~l~rv---afg-----Lg~psIi~~D~ehA~---~qnkl~~Pla~~ii~P~~~~~~~~~-----~~G~~p~ 149 (346)
T COG1817 86 DVAIGKHSPELPRV---AFG-----LGIPSIIFVDNEHAE---AQNKLTLPLADVIITPEAIDEEELL-----DFGADPN 149 (346)
T ss_pred ceEeecCCcchhhH---Hhh-----cCCceEEecCChhHH---HHhhcchhhhhheecccccchHHHH-----HhCCCcc
Confidence 99987 43322221 111 123433323221111 1123334566666655554443322 4566555
Q ss_pred CeEEEeCCCCc----cccchhhhhHHHHHhHHHHHHhcCCCCC-CEEEEEecc-----cccCcchHHHHHHHHHHHHHHH
Q 011954 231 ETYVVHLGNSK----DLMDIAEDSVARRVLREHVRESLGVRDD-DLLFAIINS-----VSRGKGQDLFLHSFYESLQLIR 300 (474)
Q Consensus 231 ki~vi~ngvd~----~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~i~~vgr-----l~~~Kg~~~ll~a~~~l~~~~~ 300 (474)
++ +-+||+.. ..|.|+ .++-+++|+..+ +++++=.-. ....++.+.+.+++.++.+
T Consensus 150 ~i-~~~~giae~~~v~~f~pd----------~evlkeLgl~~~~~yIVmRpe~~~A~y~~g~~~~~~~~~li~~l~k--- 215 (346)
T COG1817 150 KI-SGYNGIAELANVYGFVPD----------PEVLKELGLEEGETYIVMRPEPWGAHYDNGDRGISVLPDLIKELKK--- 215 (346)
T ss_pred ce-ecccceeEEeecccCCCC----------HHHHHHcCCCCCCceEEEeeccccceeeccccchhhHHHHHHHHHh---
Confidence 43 55566532 224433 456788999875 444432111 1224566566666666532
Q ss_pred HhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCCCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHh
Q 011954 301 EKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYLASIDVLVQNSQARGECFGRITIEAMA 380 (474)
Q Consensus 301 ~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma 380 (474)
.-.+++-.. .+.++..+.. ++++..-...|--+++.-|++++ .+ .|.-.-||..
T Consensus 216 --------~giV~ipr~--------~~~~eife~~---~n~i~pk~~vD~l~Llyya~lvi------g~-ggTMarEaAl 269 (346)
T COG1817 216 --------YGIVLIPRE--------KEQAEIFEGY---RNIIIPKKAVDTLSLLYYATLVI------GA-GGTMAREAAL 269 (346)
T ss_pred --------CcEEEecCc--------hhHHHHHhhh---ccccCCcccccHHHHHhhhheee------cC-CchHHHHHHH
Confidence 224444432 2233333333 23443334445455777888888 33 3566779999
Q ss_pred cCCCEEEcCCC---CcceeeeeCCceeeecCCCCChHHHHHHHHHHhhCHH
Q 011954 381 FQLPVLGTAAG---GTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVE 428 (474)
Q Consensus 381 ~G~PvI~s~~~---g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~~ 428 (474)
.|+|.|++.-| +..+.. -+.|.++...| +.+..+...+++.++.
T Consensus 270 LGtpaIs~~pGkll~vdk~l--ie~G~~~~s~~--~~~~~~~a~~~l~~~~ 316 (346)
T COG1817 270 LGTPAISCYPGKLLAVDKYL--IEKGLLYHSTD--EIAIVEYAVRNLKYRR 316 (346)
T ss_pred hCCceEEecCCccccccHHH--HhcCceeecCC--HHHHHHHHHHHhhchh
Confidence 99999999844 233333 25799999888 6666666666665543
|
|
| >PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like | Back alignment and domain information |
|---|
Probab=98.31 E-value=6.4e-06 Score=67.71 Aligned_cols=105 Identities=18% Similarity=0.171 Sum_probs=62.8
Q ss_pred EEEEEecCCCCCChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhcc--cch-h-ccceeeeehhcHHHHhhhcCC
Q 011954 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLE--HKM-L-DRGVQVLSAKGEKAINTALNA 151 (474)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~--~~~-~-~~~~~~~~~~~~~~~~~~~~~ 151 (474)
|||+++... +.++.++++.|.++|+||++++...+........... ..- . ......+....+.++.+..+|
T Consensus 1 KIl~i~~~~-----~~~~~~~~~~L~~~g~~V~ii~~~~~~~~~~~~~~i~~~~~~~~~k~~~~~~~~~~l~k~ik~~~~ 75 (139)
T PF13477_consen 1 KILLIGNTP-----STFIYNLAKELKKRGYDVHIITPRNDYEKYEIIEGIKVIRLPSPRKSPLNYIKYFRLRKIIKKEKP 75 (139)
T ss_pred CEEEEecCc-----HHHHHHHHHHHHHCCCEEEEEEcCCCchhhhHhCCeEEEEecCCCCccHHHHHHHHHHHHhccCCC
Confidence 588888754 3578999999999999999999855432221111100 000 0 001111112245666778899
Q ss_pred CEEEEcccchhhHHhHHhhhcccccccceeeeeecc
Q 011954 152 DLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEM 187 (474)
Q Consensus 152 DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~ 187 (474)
|+||+|++.+...+..+.+.... ..|++++.|+.
T Consensus 76 DvIh~h~~~~~~~~~~l~~~~~~--~~~~i~~~hg~ 109 (139)
T PF13477_consen 76 DVIHCHTPSPYGLFAMLAKKLLK--NKKVIYTVHGS 109 (139)
T ss_pred CEEEEecCChHHHHHHHHHHHcC--CCCEEEEecCC
Confidence 99999997664443433333221 25889999975
|
|
| >KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.31 E-value=5.3e-05 Score=70.82 Aligned_cols=110 Identities=18% Similarity=0.173 Sum_probs=79.3
Q ss_pred CChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCc----ceeeeeC-CceeeecC-----CCCChHHHH
Q 011954 348 LTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGT----MEIVVNG-TTGLLHPT-----GKEGVTPLA 417 (474)
Q Consensus 348 ~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~----~e~v~~~-~~G~l~~~-----~d~~~~~la 417 (474)
-+..++...|.+-|+||. +|+||.+..|.-.+|+|-|+|+.+|. .|.|++. ..|+.+-. .|+.+++|+
T Consensus 492 lDYeeFVRGCHLGVFPSY--YEPWGYTPAECTVMGiPSvtTNlSGFGcfMeehi~d~~ayGIYIvDRRfks~deSv~qL~ 569 (692)
T KOG3742|consen 492 LDYEEFVRGCHLGVFPSY--YEPWGYTPAECTVMGIPSVTTNLSGFGCFMEEHIEDPQAYGIYIVDRRFKSPDESVQQLA 569 (692)
T ss_pred CCHHHHhccccccccccc--cCCCCCCchheEEeccccccccccchhhhHHHHhcCchhceEEEEecccCChhhHHHHHH
Confidence 467788999999999999 99999999999999999999998875 4445443 34555321 122377888
Q ss_pred HHHHHHhhCHHHHHHHHHH-HHHHHHHhcCHHHHHHHHHHHHHH
Q 011954 418 NNIVKLATHVERRLTMGKK-GYERVKDRFLEHHMSQRIALVLRE 460 (474)
Q Consensus 418 ~~i~~ll~~~~~~~~~~~~-~~~~~~~~fs~~~~~~~~~~~~~~ 460 (474)
+.|..+.. ...|+++.++ .-++.....+|..+...|.+.=.-
T Consensus 570 ~~m~~F~~-qsRRQRIiqRNrtErLSdLLDWk~lG~~Y~~aR~l 612 (692)
T KOG3742|consen 570 SFMYEFCK-QSRRQRIIQRNRTERLSDLLDWKYLGRYYRKARHL 612 (692)
T ss_pred HHHHHHHH-HHHHHHHHHhcchhhHHHHHhHHHHhHHHHHHHHH
Confidence 88877764 4455555544 445666778999888777654333
|
|
| >PRK10017 colanic acid biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=98.29 E-value=0.0034 Score=61.44 Aligned_cols=343 Identities=13% Similarity=0.072 Sum_probs=163.2
Q ss_pred CEEEEEecCC-CCCChhHHHHHHHHHHHhcC--cEEEEEeCCCCCCchhhh------------hhccc----------ch
Q 011954 75 KLVLLVSHEL-SLSGGPLLLMELAFLLRGVG--AEVVWITNQKPNEPDEVI------------YSLEH----------KM 129 (474)
Q Consensus 75 ~kIl~v~~~~-~~gG~~~~~~~l~~~L~~~G--~~V~v~~~~~~~~~~~~~------------~~~~~----------~~ 129 (474)
|||+++..+. ..-|-|-.+..++..|++.. .+++|++........... ..... ..
T Consensus 1 ~~i~i~G~~g~~N~GdeAil~~ii~~l~~~~p~~~i~v~S~~P~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 80 (426)
T PRK10017 1 MKLLILGNHTCGNRGDSAILRGLLDAINILNPHAEVDVMSRYPVSSSWLLNRPVMGDPLFLQMKQHNSAAGVVGRVKKVL 80 (426)
T ss_pred CeEEEEccccCCCccHHHHHHHHHHHHHhhCCCCeEEEEecCccchhhhcccccccchhhhhhhhcccccccchhHHHHH
Confidence 6899988763 34677889999999998865 778888854433210000 00000 00
Q ss_pred -------------hccceee-eeh-hcHHH-HhhhcCCCEEEEcccch-----h-hHHhHHhhhcccccccceeeeeecc
Q 011954 130 -------------LDRGVQV-LSA-KGEKA-INTALNADLVVLNTAVA-----G-KWLDGVLKDKVSQVLPKVLWWIHEM 187 (474)
Q Consensus 130 -------------~~~~~~~-~~~-~~~~~-~~~~~~~DiV~~~~~~~-----~-~~~~~~~~~~~~~~~~~~v~~~h~~ 187 (474)
...|... ... ..... +..-.+.|+++.-.... + ..+...+.... ...|++.+-++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aDlvI~gGG~lfqD~y~~~~~~y~l~A~l--~gkpv~l~gqsi 158 (426)
T PRK10017 81 RRRYQHQVLLSRVTDTGKLRNIAIAQGFTDFVRLLSGYDAIIQVGGSFFVDLYGVPQFEHALCAFM--AKKPLYMIGHSV 158 (426)
T ss_pred HhhhhHHHHHhhhccccccccccchhhHHHHHHHHHhCCEEEECCCCccccCcccHHHHHHHHHHH--cCCCEEEECCcC
Confidence 0000000 000 00111 11236789998764211 0 00001111111 345677766665
Q ss_pred ccccchhhhhhcccccccccccccccHHHHHHhHHHHhcCCCCCeEEEeCCCCccccchhhhhH-HHHHhHHHHHHhcCC
Q 011954 188 RGHYFKLEYVKHLPFVAGAMIDSYTTAEYWKNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSV-ARRVLREHVRESLGV 266 (474)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~-~~~~~~~~~r~~~~~ 266 (474)
+.+.....+...++... -+...++.+.....+.+.+|++.+++.+.+.. .+.-+..... .+ ...+...++.
T Consensus 159 -GPf~~~~~r~l~r~vl~-~~~~ItvRD~~S~~~Lk~lGv~~~~v~~~aDp---AF~L~~~~~~~~~---~~~~~~~~~~ 230 (426)
T PRK10017 159 -GPFQDEQFNQLANYVFG-HCDALILRESVSLDLMKRSNITTAKVEHGVDT---AWLVDHHTEDFTA---SYAVQHWLDV 230 (426)
T ss_pred -CCcCCHHHHHHHHHHHh-cCCEEEEccHHHHHHHHHhCCCccceEEecCh---hhhCCcccccccc---chhhhhhhcc
Confidence 32222222222222111 12334445555555666789988888876543 3322211000 00 0011111122
Q ss_pred CC-CCEEEEEecccccC-c----chHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCc-CchHHHHHHHHHHHcCCCC
Q 011954 267 RD-DDLLFAIINSVSRG-K----GQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNA-QTKFETELRNFVAEKKIQD 339 (474)
Q Consensus 267 ~~-~~~~i~~vgrl~~~-K----g~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~-~~~~~~~l~~~~~~~~l~~ 339 (474)
+. .+.+-+.+..+.+. | ..+...+.++++.+.+.+.| -++.|+-.-.+.+. .++.....+++.+.+.-..
T Consensus 231 ~~~~~~Vgisvr~~~~~~~~~~~~~~~Y~~~la~~i~~Li~~g---~~Vv~lp~~~~~~~~~~dD~~~~~~l~~~~~~~~ 307 (426)
T PRK10017 231 AAQQKTVAITLRELAPFDKRLGTTQQAYEKAFAGVVNRIIDEG---YQVIALSTCTGIDSYNKDDRMVALNLRQHVSDPA 307 (426)
T ss_pred cccCCEEEEEecccccccccccccHHHHHHHHHHHHHHHHHCC---CeEEEEecccCccCCCCchHHHHHHHHHhccccc
Confidence 22 23333334433321 2 12334455555555554422 33443322111110 1123344455555555444
Q ss_pred eEEEec---CCCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCC----CcceeeeeCCceeeecCCCCC
Q 011954 340 HVHFVN---KTLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAG----GTMEIVVNGTTGLLHPTGKEG 412 (474)
Q Consensus 340 ~v~~~g---~~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~----g~~e~v~~~~~G~l~~~~d~~ 412 (474)
+++++. ...++..+++.||++|-.-. -.++=|++.|+|+|+-... |.-+-+ |...++++..+-+
T Consensus 308 ~~~vi~~~~~~~e~~~iIs~~dl~ig~Rl-------Ha~I~a~~~gvP~i~i~Y~~K~~~~~~~l--g~~~~~~~~~~l~ 378 (426)
T PRK10017 308 RYHVVMDELNDLEMGKILGACELTVGTRL-------HSAIISMNFGTPAIAINYEHKSAGIMQQL--GLPEMAIDIRHLL 378 (426)
T ss_pred ceeEecCCCChHHHHHHHhhCCEEEEecc-------hHHHHHHHcCCCEEEeeehHHHHHHHHHc--CCccEEechhhCC
Confidence 444433 23567789999999986543 2677899999999987543 222222 2223434433323
Q ss_pred hHHHHHHHHHHhhCHHHHHHHHHHHHH
Q 011954 413 VTPLANNIVKLATHVERRLTMGKKGYE 439 (474)
Q Consensus 413 ~~~la~~i~~ll~~~~~~~~~~~~~~~ 439 (474)
.++|.+.+.+++++.+..++.-+.+.+
T Consensus 379 ~~~Li~~v~~~~~~r~~~~~~l~~~v~ 405 (426)
T PRK10017 379 DGSLQAMVADTLGQLPALNARLAEAVS 405 (426)
T ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 788999999999987765554333333
|
|
| >PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long) | Back alignment and domain information |
|---|
Probab=98.26 E-value=0.00056 Score=62.94 Aligned_cols=170 Identities=12% Similarity=0.053 Sum_probs=105.1
Q ss_pred CCCEEEEEecccccCcchHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEec-C
Q 011954 268 DDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVN-K 346 (474)
Q Consensus 268 ~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g-~ 346 (474)
.++..|+.-.+-++.-++..+++++++. ...++++++-=+-+....+|.+++.+.++++--.+++..+- +
T Consensus 183 ~~~ltILvGNSgd~sNnHieaL~~L~~~---------~~~~~kIivPLsYg~~n~~Yi~~V~~~~~~lF~~~~~~iL~e~ 253 (360)
T PF07429_consen 183 KGKLTILVGNSGDPSNNHIEALEALKQQ---------FGDDVKIIVPLSYGANNQAYIQQVIQAGKELFGAENFQILTEF 253 (360)
T ss_pred CCceEEEEcCCCCCCccHHHHHHHHHHh---------cCCCeEEEEECCCCCchHHHHHHHHHHHHHhcCccceeEhhhh
Confidence 3456665334445666787777777653 22678877654443333458888888888876556787765 3
Q ss_pred --CCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCc-ceeeeeCCceeeecCCCCChHHHHHHHHHH
Q 011954 347 --TLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGT-MEIVVNGTTGLLHPTGKEGVTPLANNIVKL 423 (474)
Q Consensus 347 --~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~-~e~v~~~~~G~l~~~~d~~~~~la~~i~~l 423 (474)
-+|..++++.||+.++... +.+|.|+.++ .+.+|+||+.+..... .++. +..--+++..++-|...+.++=.++
T Consensus 254 mpf~eYl~lL~~cDl~if~~~-RQQgiGnI~l-Ll~~G~~v~L~~~np~~~~l~-~~~ipVlf~~d~L~~~~v~ea~rql 330 (360)
T PF07429_consen 254 MPFDEYLALLSRCDLGIFNHN-RQQGIGNICL-LLQLGKKVFLSRDNPFWQDLK-EQGIPVLFYGDELDEALVREAQRQL 330 (360)
T ss_pred CCHHHHHHHHHhCCEEEEeec-hhhhHhHHHH-HHHcCCeEEEecCChHHHHHH-hCCCeEEeccccCCHHHHHHHHHHH
Confidence 3889999999999999987 4888886554 9999999998875554 4443 2222334433221244444444434
Q ss_pred hhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Q 011954 424 ATHVERRLTMGKKGYERVKDRFLEHHMSQRIALVLREV 461 (474)
Q Consensus 424 l~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~ 461 (474)
.. .-++.+ .|......+.|.+.+.-+
T Consensus 331 ~~----------~dk~~i--aFf~pny~~~w~~~l~~~ 356 (360)
T PF07429_consen 331 AN----------VDKQQI--AFFAPNYLQGWRQALRLA 356 (360)
T ss_pred hh----------Ccccce--eeeCCchHHHHHHHHHHH
Confidence 32 111111 166666777776666544
|
This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall |
| >COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.21 E-value=5.8e-05 Score=76.60 Aligned_cols=143 Identities=20% Similarity=0.192 Sum_probs=109.7
Q ss_pred CCCCCEEEEEecccccCcchHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCch---HHHHHHHHHHHcCCCCeEE
Q 011954 266 VRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTK---FETELRNFVAEKKIQDHVH 342 (474)
Q Consensus 266 ~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~---~~~~l~~~~~~~~l~~~v~ 342 (474)
++++.+.++++-|++.+|.+.+.+.-...+.+.+++. ..|.+++++.|...+.+.. ....+...++..+...+|.
T Consensus 483 ~~p~~lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~d--~~prv~~iFaGKAhP~y~~aK~iIk~I~~~a~~in~~lkVv 560 (750)
T COG0058 483 VDPNALFDGQARRIHEYKRQLLNLLDIERLYRILKED--WVPRVQIIFAGKAHPADYAAKEIIKLINDVADVINNKLKVV 560 (750)
T ss_pred cCCCcceeeeehhhhhhhhhHHhHhhHHHHHHHHhcC--CCCceEEEEeccCCCcchHHHHHHHHHHHHHHhhcccceEE
Confidence 4566789999999999999999888888887777631 3467787888875544421 2233344444444446788
Q ss_pred EecCC--CChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCcceeee--eCCceeeecCCC
Q 011954 343 FVNKT--LTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVV--NGTTGLLHPTGK 410 (474)
Q Consensus 343 ~~g~~--~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~~e~v~--~~~~G~l~~~~d 410 (474)
|+... +-...++.+|||-.+.|+...|..|.+=|-||.-|.+-|+|--|...|+.+ +++||+++....
T Consensus 561 Fl~nYdvslA~~iipa~Dvweqis~a~~EASGTsnMK~alNGaltigtlDGanvEi~e~vg~~N~~~fG~~~ 632 (750)
T COG0058 561 FLPNYDVSLAELLIPAADVWEQIPTAGKEASGTSNMKAALNGALTLGTLDGANVEIYEHVGGENGWIFGETV 632 (750)
T ss_pred EeCCCChhHHHhhcccccccccCCCCCccccCcCcchHHhcCCceeeccccHHHHHHHhcCCCceEEeCCch
Confidence 88853 444557899999999887778999999999999999999999999999886 889999998765
|
|
| >COG4671 Predicted glycosyl transferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.19 E-value=0.00065 Score=62.24 Aligned_cols=141 Identities=16% Similarity=0.184 Sum_probs=85.5
Q ss_pred CCCCEEEEEecccccCcchHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecC
Q 011954 267 RDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNK 346 (474)
Q Consensus 267 ~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~ 346 (474)
+++..+++.+|. -.-|-+++..++ .....+.+. ...-++|.|...+ ++..+++.....-.++|.+..+
T Consensus 217 pE~~~Ilvs~GG--G~dG~eLi~~~l-~A~~~l~~l----~~~~~ivtGP~MP-----~~~r~~l~~~A~~~p~i~I~~f 284 (400)
T COG4671 217 PEGFDILVSVGG--GADGAELIETAL-AAAQLLAGL----NHKWLIVTGPFMP-----EAQRQKLLASAPKRPHISIFEF 284 (400)
T ss_pred CccceEEEecCC--ChhhHHHHHHHH-HHhhhCCCC----CcceEEEeCCCCC-----HHHHHHHHHhcccCCCeEEEEh
Confidence 355677777874 344544443333 332322110 1124667777653 3333444444433468999999
Q ss_pred CCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCcce-e-ee------eCCceeeecCCCCChHHHHH
Q 011954 347 TLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTME-I-VV------NGTTGLLHPTGKEGVTPLAN 418 (474)
Q Consensus 347 ~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~~e-~-v~------~~~~G~l~~~~d~~~~~la~ 418 (474)
.+++..++..|+..|. -+.=+++.|-+++|||.+.-.....+| - +. =|-...+.+.+ -.++.|++
T Consensus 285 ~~~~~~ll~gA~~vVS------m~GYNTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~LGL~dvL~pe~-lt~~~La~ 357 (400)
T COG4671 285 RNDFESLLAGARLVVS------MGGYNTVCEILSFGKPALIVPRAAPREEQLIRAQRLEELGLVDVLLPEN-LTPQNLAD 357 (400)
T ss_pred hhhHHHHHHhhheeee------cccchhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhcCcceeeCccc-CChHHHHH
Confidence 9999999999999993 333468999999999998776554333 1 10 02223334333 23889999
Q ss_pred HHHHHhhC
Q 011954 419 NIVKLATH 426 (474)
Q Consensus 419 ~i~~ll~~ 426 (474)
+|..+++.
T Consensus 358 al~~~l~~ 365 (400)
T COG4671 358 ALKAALAR 365 (400)
T ss_pred HHHhcccC
Confidence 99988873
|
|
| >KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.13 E-value=0.00063 Score=66.56 Aligned_cols=238 Identities=15% Similarity=0.152 Sum_probs=154.5
Q ss_pred ccccccccccccccHHHHHHhHHHHhcCCCCCeEEEeCCCCc--cccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEec
Q 011954 200 LPFVAGAMIDSYTTAEYWKNRTRERLGIRMPETYVVHLGNSK--DLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIIN 277 (474)
Q Consensus 200 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ki~vi~ngvd~--~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vg 277 (474)
...+|.+++++.+..-.+.....+.+-. .+....|...-.. +...|... ..|..+++|++.+++..+.
T Consensus 697 a~~mDYiITDs~tsPl~~a~~ysEkLv~-lPh~ffi~d~~qk~~~~~dpn~k---------P~r~~y~Lp~d~vvf~~FN 766 (966)
T KOG4626|consen 697 ATFMDYIITDSVTSPLELAQQYSEKLVY-LPHCFFIGDHKQKNQDVLDPNNK---------PTRSQYGLPEDAVVFCNFN 766 (966)
T ss_pred CceeeEEeecccCChHHHHHHHHHHHhh-CCceEEecCcccccccccCCCCC---------CCCCCCCCCCCeEEEeech
Confidence 3567778888877666665555555432 2335555543321 11222211 2477899999988887777
Q ss_pred ccccCcchHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCC-CeEEEecC--CCChHHHH
Q 011954 278 SVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQ-DHVHFVNK--TLTVSPYL 354 (474)
Q Consensus 278 rl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~-~~v~~~g~--~~~~~~~~ 354 (474)
.+ .|=-...++.+.++++ +.|+-.|++.--.. --+..++..+.++|++ ++|.|..- .++=..-+
T Consensus 767 qL--yKidP~~l~~W~~ILk-------~VPnS~LwllrfPa----~ge~rf~ty~~~~Gl~p~riifs~va~k~eHvrr~ 833 (966)
T KOG4626|consen 767 QL--YKIDPSTLQMWANILK-------RVPNSVLWLLRFPA----VGEQRFRTYAEQLGLEPDRIIFSPVAAKEEHVRRG 833 (966)
T ss_pred hh--hcCCHHHHHHHHHHHH-------hCCcceeEEEeccc----cchHHHHHHHHHhCCCccceeeccccchHHHHHhh
Confidence 65 4555678888888877 45888887766432 1357889999999986 56777662 25555667
Q ss_pred hcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCcce-----eeeeCCceeeecCCCCChHHHHHHHHHHhhCHHH
Q 011954 355 ASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTME-----IVVNGTTGLLHPTGKEGVTPLANNIVKLATHVER 429 (474)
Q Consensus 355 ~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~~e-----~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~~~ 429 (474)
+.+||++-+-. ..| -.+-+|.+.+|+|+|+-...-... .+.--..|-++..+ -++..+.-.+|-.|.+.
T Consensus 834 ~LaDv~LDTpl--cnG-hTTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~~Gl~hliak~---~eEY~~iaV~Latd~~~ 907 (966)
T KOG4626|consen 834 QLADVCLDTPL--CNG-HTTGMDVLWAGVPMVTMPGETLASRVAASLLTALGLGHLIAKN---REEYVQIAVRLATDKEY 907 (966)
T ss_pred hhhhhcccCcC--cCC-cccchhhhccCCceeecccHHHHHHHHHHHHHHcccHHHHhhh---HHHHHHHHHHhhcCHHH
Confidence 88999997654 222 346789999999999753221110 00011234344333 57888888888889998
Q ss_pred HHHHHHHHHHHHH--HhcCHHHHHHHHHHHHHHHHhhhh
Q 011954 430 RLTMGKKGYERVK--DRFLEHHMSQRIALVLREVLQYAK 466 (474)
Q Consensus 430 ~~~~~~~~~~~~~--~~fs~~~~~~~~~~~~~~~~~~~~ 466 (474)
.+.++..-+.... .-|+-..++..++++|.+.+++--
T Consensus 908 L~~lr~~l~~~r~~splfd~~q~~~~LE~~y~~MW~~y~ 946 (966)
T KOG4626|consen 908 LKKLRAKLRKARASSPLFDTKQYAKGLERLYLQMWKKYC 946 (966)
T ss_pred HHHHHHHHHHHhcCCCccCchHHHHHHHHHHHHHHHHhc
Confidence 8888776555432 349999999999999999887543
|
|
| >PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.98 E-value=3e-06 Score=72.12 Aligned_cols=93 Identities=16% Similarity=0.198 Sum_probs=65.7
Q ss_pred CeEEEecCCCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCc--------ceeeeeCCceeeecCCC
Q 011954 339 DHVHFVNKTLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGT--------MEIVVNGTTGLLHPTGK 410 (474)
Q Consensus 339 ~~v~~~g~~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~--------~e~v~~~~~G~l~~~~d 410 (474)
.+|.+.++.+++.++|+.||++| .-+.+.++.|++++|+|.|.-...+. ...+.+...|......+
T Consensus 55 ~~v~~~~~~~~m~~~m~~aDlvI------s~aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~~~~~~ 128 (167)
T PF04101_consen 55 PNVKVFGFVDNMAELMAAADLVI------SHAGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIMLDESE 128 (167)
T ss_dssp CCCEEECSSSSHHHHHHHHSEEE------ECS-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCCSECCC
T ss_pred CcEEEEechhhHHHHHHHcCEEE------eCCCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCccccCccc
Confidence 68999999999999999999999 44456899999999999988765551 11233334566665554
Q ss_pred CChHHHHHHHHHHhhCHHHHHHHHHHH
Q 011954 411 EGVTPLANNIVKLATHVERRLTMGKKG 437 (474)
Q Consensus 411 ~~~~~la~~i~~ll~~~~~~~~~~~~~ 437 (474)
.+++.|.++|..++.++.....|.+++
T Consensus 129 ~~~~~L~~~i~~l~~~~~~~~~~~~~~ 155 (167)
T PF04101_consen 129 LNPEELAEAIEELLSDPEKLKEMAKAA 155 (167)
T ss_dssp -SCCCHHHHHHCHCCCHH-SHHHCCCH
T ss_pred CCHHHHHHHHHHHHcCcHHHHHHHHHH
Confidence 347889999999999988777765543
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B. |
| >PRK14986 glycogen phosphorylase; Provisional | Back alignment and domain information |
|---|
Probab=97.94 E-value=0.00019 Score=73.88 Aligned_cols=155 Identities=15% Similarity=0.164 Sum_probs=111.3
Q ss_pred HHhcC--CCCCCEEEEEecccccCcchHH-HHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHc--
Q 011954 261 RESLG--VRDDDLLFAIINSVSRGKGQDL-FLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEK-- 335 (474)
Q Consensus 261 r~~~~--~~~~~~~i~~vgrl~~~Kg~~~-ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~-- 335 (474)
+++.| ++++.+.++++-|+..+|.+.+ ++..+.++.+...+.+.+..+.++++.|...+.+. ..+.+.+++...
T Consensus 532 ~~~~g~~ldp~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP~y~-~aK~iIk~I~~va~ 610 (815)
T PRK14986 532 AQQLNVVVNPKALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAASAYY-MAKHIIHLINDVAK 610 (815)
T ss_pred HHHhCCccCcccceeeeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcH-HHHHHHHHHHHHHH
Confidence 34445 5667788999999999999999 88887777544332111113588888887655543 334444443322
Q ss_pred ------CCCC--eEEEecCC--CChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCcceeeee--CCce
Q 011954 336 ------KIQD--HVHFVNKT--LTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVN--GTTG 403 (474)
Q Consensus 336 ------~l~~--~v~~~g~~--~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~~e~v~~--~~~G 403 (474)
.+.+ +|.|+... +--..++.+||+....|+...|..|..=+=||.-|.+.++|--|...|+.++ ++||
T Consensus 611 ~in~Dp~v~~~lkVVFlenY~vslAe~lipg~Dv~eqis~ag~EASGTsnMK~alNGaLtlgtlDG~nvEi~e~vG~eN~ 690 (815)
T PRK14986 611 VINNDPQIGDKLKVVFIPNYSVSLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMLEHVGEENI 690 (815)
T ss_pred HhccChhhcCceeEEEeCCCCHHHHHHhhhhhhhhhhCCCCCccccCcchhhHHhcCceeeeccCCchhHHHHhcCCCcE
Confidence 2233 68888853 4455678999999998887789999999999999999999999999998865 7899
Q ss_pred eeecCCCCChHHHHHH
Q 011954 404 LLHPTGKEGVTPLANN 419 (474)
Q Consensus 404 ~l~~~~d~~~~~la~~ 419 (474)
+++... ++++.+.
T Consensus 691 ~~fG~~---~~ev~~~ 703 (815)
T PRK14986 691 FIFGNT---AEEVEAL 703 (815)
T ss_pred EEeCCC---HHHHHHH
Confidence 999765 4555443
|
|
| >PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2 | Back alignment and domain information |
|---|
Probab=97.93 E-value=2.5e-05 Score=70.65 Aligned_cols=40 Identities=23% Similarity=0.172 Sum_probs=32.5
Q ss_pred EEEEEecCCCC----CChhHHHHHHHHHHHhcCcEEEEEeCCCC
Q 011954 76 LVLLVSHELSL----SGGPLLLMELAFLLRGVGAEVVWITNQKP 115 (474)
Q Consensus 76 kIl~v~~~~~~----gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 115 (474)
|||+++.+..| ||...++..|+++|+++||+|.|+++..+
T Consensus 1 kIl~vt~E~~P~~k~GGLgdv~~~L~kaL~~~G~~V~Vi~P~y~ 44 (245)
T PF08323_consen 1 KILMVTSEYAPFAKVGGLGDVVGSLPKALAKQGHDVRVIMPKYG 44 (245)
T ss_dssp EEEEE-S-BTTTB-SSHHHHHHHHHHHHHHHTT-EEEEEEE-TH
T ss_pred CEEEEEcccCcccccCcHhHHHHHHHHHHHhcCCeEEEEEccch
Confidence 79999999766 78899999999999999999999998763
|
4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A .... |
| >PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.89 E-value=0.00028 Score=70.94 Aligned_cols=140 Identities=15% Similarity=0.098 Sum_probs=90.8
Q ss_pred CCEEEEEecccccC-----cchHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEE
Q 011954 269 DDLLFAIINSVSRG-----KGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHF 343 (474)
Q Consensus 269 ~~~~i~~vgrl~~~-----Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~ 343 (474)
+..+++..|..... +-...+++|++++ + .++++..++. ... .++++||.+
T Consensus 296 ~g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l-----------~-~~viw~~~~~-----~~~--------~~~p~Nv~i 350 (507)
T PHA03392 296 NGVVYVSFGSSIDTNDMDNEFLQMLLRTFKKL-----------P-YNVLWKYDGE-----VEA--------INLPANVLT 350 (507)
T ss_pred CcEEEEECCCCCcCCCCCHHHHHHHHHHHHhC-----------C-CeEEEEECCC-----cCc--------ccCCCceEE
Confidence 34777778886532 2234445555433 3 4666655432 111 234679999
Q ss_pred ecCCCChHHHH--hcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCC----cceeeeeCCceeeecCCCCChHHHH
Q 011954 344 VNKTLTVSPYL--ASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGG----TMEIVVNGTTGLLHPTGKEGVTPLA 417 (474)
Q Consensus 344 ~g~~~~~~~~~--~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g----~~e~v~~~~~G~l~~~~d~~~~~la 417 (474)
.++.. -.+++ ..+++|| .-|...++.||+.+|+|+|+-...+ ....++..+.|...+..+-+.+++.
T Consensus 351 ~~w~P-q~~lL~hp~v~~fI------tHGG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~G~G~~l~~~~~t~~~l~ 423 (507)
T PHA03392 351 QKWFP-QRAVLKHKNVKAFV------TQGGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIGRALDTVTVSAAQLV 423 (507)
T ss_pred ecCCC-HHHHhcCCCCCEEE------ecCCcccHHHHHHcCCCEEECCCCccHHHHHHHHHHcCcEEEeccCCcCHHHHH
Confidence 99863 35677 5689999 4555679999999999999986543 2223344557877766543479999
Q ss_pred HHHHHHhhCHHHHHHHHHHHHHH
Q 011954 418 NNIVKLATHVERRLTMGKKGYER 440 (474)
Q Consensus 418 ~~i~~ll~~~~~~~~~~~~~~~~ 440 (474)
++|.++++|+..+++..+-+...
T Consensus 424 ~ai~~vl~~~~y~~~a~~ls~~~ 446 (507)
T PHA03392 424 LAIVDVIENPKYRKNLKELRHLI 446 (507)
T ss_pred HHHHHHhCCHHHHHHHHHHHHHH
Confidence 99999999987666655544443
|
|
| >PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.82 E-value=0.0011 Score=67.55 Aligned_cols=148 Identities=16% Similarity=0.190 Sum_probs=90.7
Q ss_pred HHHhcC--CCCCCEEEEEecccccCcchHH-HHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHc-
Q 011954 260 VRESLG--VRDDDLLFAIINSVSRGKGQDL-FLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEK- 335 (474)
Q Consensus 260 ~r~~~~--~~~~~~~i~~vgrl~~~Kg~~~-ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~- 335 (474)
+++..+ ++++.+..+++-|+..+|...+ ++..+..+.+....-+.+..++++++.|...+.+. ..+++.+++...
T Consensus 432 i~~~~~~~ldp~slfdv~~rR~heYKRq~LniL~ii~~y~rik~~p~~~~~Pv~~IFaGKAhP~d~-~gK~iIk~I~~va 510 (713)
T PF00343_consen 432 IKKRTGVELDPDSLFDVQARRFHEYKRQLLNILHIIDRYNRIKNNPNKKIRPVQFIFAGKAHPGDY-MGKEIIKLINNVA 510 (713)
T ss_dssp HHHHHSS---TTSEEEEEES-SCCCCTHHHHHHHHHHHHHHHHHSTTSCCS-EEEEEE----TT-H-HHHHHHHHHHHHH
T ss_pred HHHHhCCCCCcchhhhhhhhhcccccccCcccccHHHHHHHHHhcccCCCCCeEEEEeccCCCCcH-HHHHHHHHHHHHH
Confidence 344444 4677788899999999999888 45555555332222111234688999998654443 344444444322
Q ss_pred -------CCCC--eEEEecCC--CChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCcceeeee--CCc
Q 011954 336 -------KIQD--HVHFVNKT--LTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVN--GTT 402 (474)
Q Consensus 336 -------~l~~--~v~~~g~~--~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~~e~v~~--~~~ 402 (474)
.+.+ +|.|+... +--..++.++||-...|+...|..|..-+=||.-|.+.+++--|...|+.+. ++|
T Consensus 511 ~~in~Dp~v~~~lkVvFlenYdvslA~~lipg~DVwln~p~~p~EASGTSgMK~~~NGaL~lstlDG~niEi~e~vG~eN 590 (713)
T PF00343_consen 511 EVINNDPEVGDRLKVVFLENYDVSLAEKLIPGVDVWLNIPTRPKEASGTSGMKAAMNGALNLSTLDGWNIEIAEAVGEEN 590 (713)
T ss_dssp HHHCT-TTTCCGEEEEEETT-SHHHHHHHGGG-SEEEE---TTSSSS-SHHHHHHHTT-EEEEESSTCHHHHHHHH-GGG
T ss_pred HHHhcChhhccceeEEeecCCcHHHHHHHhhhhhhhhhCCCCCccccCCCcchhhcCCCeEEecccchhHHHHHhcCCCc
Confidence 2333 78999853 4455678999999998877789999999999999999999998988887642 457
Q ss_pred eeeecC
Q 011954 403 GLLHPT 408 (474)
Q Consensus 403 G~l~~~ 408 (474)
.++|-.
T Consensus 591 ~fiFG~ 596 (713)
T PF00343_consen 591 IFIFGL 596 (713)
T ss_dssp SEEES-
T ss_pred EEEcCC
Confidence 777754
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B .... |
| >TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00029 Score=72.43 Aligned_cols=156 Identities=17% Similarity=0.191 Sum_probs=112.5
Q ss_pred HHHhcC--CCCCCEEEEEecccccCcchHH-HHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcC
Q 011954 260 VRESLG--VRDDDLLFAIINSVSRGKGQDL-FLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKK 336 (474)
Q Consensus 260 ~r~~~~--~~~~~~~i~~vgrl~~~Kg~~~-ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~ 336 (474)
++++.| ++++.+..+++-|+..+|.+.+ ++..+.++.+...+......+.++++.|...+... ..+.+.+++....
T Consensus 515 i~~~~g~~ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~-~aK~iIklI~~va 593 (794)
T TIGR02093 515 IKEHTGVEVDPNSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKAAPGYH-MAKLIIKLINSVA 593 (794)
T ss_pred HHHhcCCccCccccchhhheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecCCCCcH-HHHHHHHHHHHHH
Confidence 344555 4567788889999999999999 78877777544332111112568888887655443 4455555554433
Q ss_pred --------CCC--eEEEecC--CCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCcceeeee--CCc
Q 011954 337 --------IQD--HVHFVNK--TLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVN--GTT 402 (474)
Q Consensus 337 --------l~~--~v~~~g~--~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~~e~v~~--~~~ 402 (474)
+.+ +|.|+.. ++--..++.+||+....|+...|..|..=+=+|.-|.+.++|--|...|+.++ ++|
T Consensus 594 ~~iN~Dp~v~~~lkVVFlenY~VslAe~iipaaDvseqistag~EASGTsnMK~alNGaltlgtlDGanvEi~e~vG~eN 673 (794)
T TIGR02093 594 EVVNNDPAVGDKLKVVFVPNYNVSLAELIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIREEVGAEN 673 (794)
T ss_pred HHhccChhhCCceeEEEeCCCChHHHHHhhhhhhhhhhCCCCCccccCcchhHHHhcCcceeecccchhHHHHHHhCccc
Confidence 334 6888885 34556678999999998887789999999999999999999999998888766 789
Q ss_pred eeeecCCCCChHHHHHH
Q 011954 403 GLLHPTGKEGVTPLANN 419 (474)
Q Consensus 403 G~l~~~~d~~~~~la~~ 419 (474)
+++|-.. .+++.+.
T Consensus 674 ~fiFG~~---~~ev~~~ 687 (794)
T TIGR02093 674 IFIFGLT---VEEVEAL 687 (794)
T ss_pred EEEcCCC---HHHHHHH
Confidence 9999765 4555543
|
This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources. |
| >PRK14985 maltodextrin phosphorylase; Provisional | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00046 Score=70.90 Aligned_cols=148 Identities=14% Similarity=0.126 Sum_probs=106.1
Q ss_pred HHhcC--CCCCCEEEEEecccccCcchHH-HHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcC-
Q 011954 261 RESLG--VRDDDLLFAIINSVSRGKGQDL-FLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKK- 336 (474)
Q Consensus 261 r~~~~--~~~~~~~i~~vgrl~~~Kg~~~-ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~- 336 (474)
+++.| ++++.+.++++-|+..+|.+.+ ++..+.++.+...+......+.++++.|...+.+. ..+.+.+++....
T Consensus 518 ~~~~g~~ldp~slfdvq~kR~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~-~aK~iIklI~~va~ 596 (798)
T PRK14985 518 KQRTGIEINPQAIFDVQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYY-LAKNIIFAINKVAE 596 (798)
T ss_pred HHHhCCccCchhcchhhHhhhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcH-HHHHHHHHHHHHHH
Confidence 34444 4667788899999999999999 88887777544322110113478888887655443 3444444443322
Q ss_pred -------CCC--eEEEecCC--CChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCcceeeee--CCce
Q 011954 337 -------IQD--HVHFVNKT--LTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVN--GTTG 403 (474)
Q Consensus 337 -------l~~--~v~~~g~~--~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~~e~v~~--~~~G 403 (474)
+.+ +|.|+... +--..++.+||+....|+...|..|..=+=+|.-|.+.++|--|...|+.++ ++||
T Consensus 597 ~in~Dp~v~~~lkVVFlenY~VslAe~lipaaDvseqis~ag~EASGTsnMK~amNGaLtlgtlDGanvEi~e~vG~eN~ 676 (798)
T PRK14985 597 VINNDPLVGDKLKVVFLPDYCVSAAELLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEQVGEENI 676 (798)
T ss_pred HhcCChhhCCceeEEEeCCCChHHHHHHhhhhhhhhhCCCCCccccCcchhHHHhcCceeeecccchHHHHHHHhCcCcE
Confidence 223 68888853 4456678999999998877789999999999999999999999988888754 6788
Q ss_pred eeecCC
Q 011954 404 LLHPTG 409 (474)
Q Consensus 404 ~l~~~~ 409 (474)
+++-..
T Consensus 677 f~fG~~ 682 (798)
T PRK14985 677 FIFGHT 682 (798)
T ss_pred EEeCCC
Confidence 888654
|
|
| >cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00054 Score=70.71 Aligned_cols=154 Identities=16% Similarity=0.166 Sum_probs=110.2
Q ss_pred HHhcC--CCCCCEEEEEecccccCcchHH-HHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcC-
Q 011954 261 RESLG--VRDDDLLFAIINSVSRGKGQDL-FLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKK- 336 (474)
Q Consensus 261 r~~~~--~~~~~~~i~~vgrl~~~Kg~~~-ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~- 336 (474)
++..| ++++.+..+++-|+..+|.+.+ ++..+.++.+...+......+.++++.|...+... ..+.+.+++....
T Consensus 519 ~~~~g~~ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~-~aK~iIklI~~va~ 597 (797)
T cd04300 519 KKTTGVEVDPDSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAPGYY-MAKLIIKLINAVAD 597 (797)
T ss_pred HHHhCCccCCCccEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCCCcH-HHHHHHHHHHHHHH
Confidence 34445 4677788999999999999999 77777766544322111113478888887655443 3444444443321
Q ss_pred -------CCC--eEEEecC--CCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCcceeeee--CCce
Q 011954 337 -------IQD--HVHFVNK--TLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVN--GTTG 403 (474)
Q Consensus 337 -------l~~--~v~~~g~--~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~~e~v~~--~~~G 403 (474)
+.+ +|.|+.. ++--..++.+||+-...|+...|..|..=|=+|.-|.+.++|--|...|+.++ ++|+
T Consensus 598 ~in~Dp~v~~~lkVVFlenY~VslAe~iipaaDvseqis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vG~eN~ 677 (797)
T cd04300 598 VVNNDPDVGDKLKVVFLPNYNVSLAEKIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIAEEVGEENI 677 (797)
T ss_pred HhccChhcCCceEEEEeCCCChHHHHHhhhhhhhhhhCCCCCccccCCchhhHHhcCceeeecccchhHHHHHHhCcCcE
Confidence 233 6888885 34556678999999998887789999999999999999999999998888765 7899
Q ss_pred eeecCCCCChHHHHH
Q 011954 404 LLHPTGKEGVTPLAN 418 (474)
Q Consensus 404 ~l~~~~d~~~~~la~ 418 (474)
++|-.. ++++.+
T Consensus 678 fiFG~~---~~ev~~ 689 (797)
T cd04300 678 FIFGLT---AEEVEA 689 (797)
T ss_pred EEeCCC---HHHHHH
Confidence 999765 455443
|
It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.041 Score=52.49 Aligned_cols=100 Identities=18% Similarity=0.191 Sum_probs=66.9
Q ss_pred CCEEEEEec-ccccCcchHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCC
Q 011954 269 DDLLFAIIN-SVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKT 347 (474)
Q Consensus 269 ~~~~i~~vg-rl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~ 347 (474)
.+.+++..| .-...|++. .+-++++.+.+.+ ...+++++|+. +..+..+++.+.++. .+.+.|..
T Consensus 175 ~~~i~i~pg~s~~~~K~wp--~e~~~~l~~~l~~-----~~~~Vvl~g~~-----~e~e~~~~i~~~~~~--~~~l~~k~ 240 (334)
T COG0859 175 RPYIVINPGASRGSAKRWP--LEHYAELAELLIA-----KGYQVVLFGGP-----DEEERAEEIAKGLPN--AVILAGKT 240 (334)
T ss_pred CCeEEEeccccccccCCCC--HHHHHHHHHHHHH-----CCCEEEEecCh-----HHHHHHHHHHHhcCC--ccccCCCC
Confidence 467777788 666777664 3344444444444 34889999986 256666666666642 23366753
Q ss_pred --CChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcC
Q 011954 348 --LTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTA 389 (474)
Q Consensus 348 --~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~ 389 (474)
.++..++..||++|.+.. |. +==|.|.|+|+|+--
T Consensus 241 sL~e~~~li~~a~l~I~~DS------g~-~HlAaA~~~P~I~iy 277 (334)
T COG0859 241 SLEELAALIAGADLVIGNDS------GP-MHLAAALGTPTIALY 277 (334)
T ss_pred CHHHHHHHHhcCCEEEccCC------hH-HHHHHHcCCCEEEEE
Confidence 889999999999996654 32 334889999999864
|
|
| >KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.028 Score=58.29 Aligned_cols=192 Identities=14% Similarity=0.056 Sum_probs=132.0
Q ss_pred CeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHHHHHHHHHHHHHHHHhccCCCcEE
Q 011954 231 ETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMH 310 (474)
Q Consensus 231 ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~ 310 (474)
.+..+|-|+|...+..............+++..+ .++.+++.+-|+...||+..=+.++.++++...+. .+.+.
T Consensus 240 ~v~~~pigid~~r~v~~~~~~~~~~~~~ei~~~~---~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~---~~kVv 313 (732)
T KOG1050|consen 240 SVKALPIGIDVQRFVKLLELPYVGSKGMEIKEPF---KGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEW---IDKVV 313 (732)
T ss_pred eeeecccccchHHhhccccchhHHHHHHHHhhhc---cCCceEecccccccccCchHHHHHHHHHHHhChhh---hceEE
Confidence 4566778888887765544433333355666655 46678888999999999999999999988755432 24566
Q ss_pred EEEEcCCCCcCchHHHHHHHHHH----H----cCC--CCeEEEecC---CCChHHHHhcCCEEEEcCCCCCCCCchHHHH
Q 011954 311 AVVVGSDMNAQTKFETELRNFVA----E----KKI--QDHVHFVNK---TLTVSPYLASIDVLVQNSQARGECFGRITIE 377 (474)
Q Consensus 311 l~i~G~g~~~~~~~~~~l~~~~~----~----~~l--~~~v~~~g~---~~~~~~~~~~adv~v~ps~~~~E~~~~~~~E 377 (474)
++.+..+...+.+..++++..+. + .+- ...|+++-. ..++.+++..+|+++..+. .+|..++.+|
T Consensus 314 liqi~~~~~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Vaev~~v~s~--rdGmnl~~~e 391 (732)
T KOG1050|consen 314 LIQIENPKRTDGKEVEELKFCVSVHVRRINEKFGSASYQPVHSLLKDLPFLELLALYKVAEVCPVTSW--RDGMNLVFLE 391 (732)
T ss_pred EEEEecCCcccchHHHHHHHHhHhhhhhhhhccCCcccceEEEeeccCCHHHHhhhHHhhhheeeccc--ccccchhhhH
Confidence 66666554333322223333222 1 111 123444432 3678899999999999998 9999999999
Q ss_pred HHhcC----CCEEEcCCCCcceeeeeCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHH
Q 011954 378 AMAFQ----LPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMG 434 (474)
Q Consensus 378 Ama~G----~PvI~s~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~ 434 (474)
+.+|. .+.|.+..-|..+.. +....++.+.+ .++++.+|...+..++.-.+++
T Consensus 392 ~i~~~~~~~~~lVlsef~G~~~tl--~d~aivvnpw~--~~~~~~~i~~al~~s~~e~~~r 448 (732)
T KOG1050|consen 392 YILCQENKKSVLVLSEFIGDDTTL--EDAAIVVNPWD--GDEFAILISKALTMSDEERELR 448 (732)
T ss_pred HHHhhcccCCceEEeeeccccccc--cccCEEECCcc--hHHHHHHHHHHhhcCHHHHhhc
Confidence 99884 678888888887776 34567888888 8999999999998555444443
|
|
| >cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS) | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.042 Score=51.00 Aligned_cols=97 Identities=18% Similarity=0.148 Sum_probs=58.4
Q ss_pred EEEEecccccCcc--hHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecC--C
Q 011954 272 LFAIINSVSRGKG--QDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNK--T 347 (474)
Q Consensus 272 ~i~~vgrl~~~Kg--~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~--~ 347 (474)
+++..|.-.+.|. .+.+.+.+..+.+ .+++++++|+.. ..+..+++.+..+....+.+.|. .
T Consensus 124 i~i~~~~~~~~k~w~~~~~~~l~~~l~~---------~~~~ivl~g~~~-----e~~~~~~i~~~~~~~~~~~~~~~~~l 189 (279)
T cd03789 124 VVLPPGASGPAKRWPAERFAALADRLLA---------RGARVVLTGGPA-----ERELAEEIAAALGGPRVVNLAGKTSL 189 (279)
T ss_pred EEECCCCCCccccCCHHHHHHHHHHHHH---------CCCEEEEEechh-----hHHHHHHHHHhcCCCccccCcCCCCH
Confidence 3334444344443 3455555555543 368889998753 34445555554432234555664 3
Q ss_pred CChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcC
Q 011954 348 LTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTA 389 (474)
Q Consensus 348 ~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~ 389 (474)
.++..+++.||++|.+.. |..- -|.+.|+|+|+--
T Consensus 190 ~e~~~li~~~~l~I~~Ds------g~~H-lA~a~~~p~i~l~ 224 (279)
T cd03789 190 RELAALLARADLVVTNDS------GPMH-LAAALGTPTVALF 224 (279)
T ss_pred HHHHHHHHhCCEEEeeCC------HHHH-HHHHcCCCEEEEE
Confidence 788999999999996542 3333 3569999998764
|
Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PRK10422 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.083 Score=50.84 Aligned_cols=102 Identities=8% Similarity=-0.014 Sum_probs=61.9
Q ss_pred CCEEEEEecccccCcchH--HHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecC
Q 011954 269 DDLLFAIINSVSRGKGQD--LFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNK 346 (474)
Q Consensus 269 ~~~~i~~vgrl~~~Kg~~--~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~ 346 (474)
++++++..|.-.+.|.+. ...+.++.+.+ .+.+++++|+..+. ..+..++.++.......+.+.|.
T Consensus 183 ~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~---------~~~~vvl~ggp~e~---e~~~~~~i~~~~~~~~~~~l~g~ 250 (352)
T PRK10422 183 QNYVVIQPTARQIFKCWDNDKFSAVIDALQA---------RGYEVVLTSGPDKD---DLACVNEIAQGCQTPPVTALAGK 250 (352)
T ss_pred CCeEEEecCCCccccCCCHHHHHHHHHHHHH---------CCCeEEEEcCCChH---HHHHHHHHHHhcCCCccccccCC
Confidence 467777888766777665 44444444422 46788888764211 12223444443332234556675
Q ss_pred --CCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcC
Q 011954 347 --TLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTA 389 (474)
Q Consensus 347 --~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~ 389 (474)
..++..+++.||++|-.-. | .+==|.|.|+|+|+--
T Consensus 251 ~sL~el~ali~~a~l~v~nDS------G-p~HlAaA~g~P~v~lf 288 (352)
T PRK10422 251 TTFPELGALIDHAQLFIGVDS------A-PAHIAAAVNTPLICLF 288 (352)
T ss_pred CCHHHHHHHHHhCCEEEecCC------H-HHHHHHHcCCCEEEEE
Confidence 3789999999999996543 2 2334778999999753
|
|
| >TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.071 Score=50.93 Aligned_cols=109 Identities=12% Similarity=0.101 Sum_probs=66.4
Q ss_pred HHHHHhcCCCC-CCEEEEEecc-cccCcchH--HHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHH
Q 011954 258 EHVRESLGVRD-DDLLFAIINS-VSRGKGQD--LFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVA 333 (474)
Q Consensus 258 ~~~r~~~~~~~-~~~~i~~vgr-l~~~Kg~~--~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~ 333 (474)
+.+...++++. +.++++..|. ..+.|.+. ...+.+..+.+ .+.+++++|+.. ..+..+++.+
T Consensus 162 ~~~~~~~~~~~~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~---------~~~~ivl~G~~~-----e~~~~~~i~~ 227 (334)
T TIGR02195 162 AAALAKFGLDTERPIIAFCPGAEFGPAKRWPHEHYAELAKRLID---------QGYQVVLFGSAK-----DHPAGNEIEA 227 (334)
T ss_pred HHHHHHcCCCCCCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHH---------CCCEEEEEEChh-----hHHHHHHHHH
Confidence 44566677654 4566666665 34667554 55555544432 357888998753 3333444443
Q ss_pred HcCCCCeEEEecC--CCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEc
Q 011954 334 EKKIQDHVHFVNK--TLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGT 388 (474)
Q Consensus 334 ~~~l~~~v~~~g~--~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s 388 (474)
..+ ...+.+.|. ..++..+++.||++|-.-. | .+==|.|.|+|+|+-
T Consensus 228 ~~~-~~~~~l~g~~sL~el~ali~~a~l~I~~DS------G-p~HlAaA~~~P~i~l 276 (334)
T TIGR02195 228 LLP-GELRNLAGETSLDEAVDLIALAKAVVTNDS------G-LMHVAAALNRPLVAL 276 (334)
T ss_pred hCC-cccccCCCCCCHHHHHHHHHhCCEEEeeCC------H-HHHHHHHcCCCEEEE
Confidence 332 122335674 3789999999999996543 2 233478999999975
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.066 Score=51.47 Aligned_cols=110 Identities=12% Similarity=0.132 Sum_probs=65.1
Q ss_pred HHHHHhcCCC-CCCEEEEEeccc-ccCcchH--HHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHH
Q 011954 258 EHVRESLGVR-DDDLLFAIINSV-SRGKGQD--LFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVA 333 (474)
Q Consensus 258 ~~~r~~~~~~-~~~~~i~~vgrl-~~~Kg~~--~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~ 333 (474)
+.+.+.+++. ++.++++..|.- .+.|.+. .+.+.++.+.+ .+++++++|+.. ..+..++..+
T Consensus 168 ~~~~~~~~~~~~~~~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~---------~~~~vvl~Gg~~-----e~~~~~~i~~ 233 (348)
T PRK10916 168 SETCAAFSLSSERPIIGFCPGAEFGPAKRWPHYHYAELAQQLID---------EGYQVVLFGSAK-----DHEAGNEILA 233 (348)
T ss_pred HHHHHHcCCCCCCCEEEEeCCCCCccccCCCHHHHHHHHHHHHH---------CCCeEEEEeCHH-----hHHHHHHHHH
Confidence 3345555553 445666677653 3567554 34444444422 467888888753 3444444444
Q ss_pred HcCCC--Ce-EEEecCC--CChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEc
Q 011954 334 EKKIQ--DH-VHFVNKT--LTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGT 388 (474)
Q Consensus 334 ~~~l~--~~-v~~~g~~--~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s 388 (474)
..+.. .+ +.+.|.. .++..+++.||++|-.-. | .+==|.|.|+|+|+-
T Consensus 234 ~~~~~~~~~~~~l~g~~sL~el~ali~~a~l~I~nDT------G-p~HlAaA~g~P~val 286 (348)
T PRK10916 234 ALNTEQQAWCRNLAGETQLEQAVILIAACKAIVTNDS------G-LMHVAAALNRPLVAL 286 (348)
T ss_pred hcccccccceeeccCCCCHHHHHHHHHhCCEEEecCC------h-HHHHHHHhCCCEEEE
Confidence 43311 12 4555643 788899999999996543 2 233488999999975
|
|
| >PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.0076 Score=61.15 Aligned_cols=140 Identities=15% Similarity=0.109 Sum_probs=79.4
Q ss_pred CCCEEEEEecccccCcchHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCC
Q 011954 268 DDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKT 347 (474)
Q Consensus 268 ~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~ 347 (474)
.+..+++..|.+.. .-.+..++++.+..+ +.|+ ++++.-.+. ....+ ++|+.+..+.
T Consensus 275 ~~~vv~vsfGs~~~-~~~~~~~~~~~~~~~-------~~~~-~~iW~~~~~-----~~~~l---------~~n~~~~~W~ 331 (500)
T PF00201_consen 275 KKGVVYVSFGSIVS-SMPEEKLKEIAEAFE-------NLPQ-RFIWKYEGE-----PPENL---------PKNVLIVKWL 331 (500)
T ss_dssp TTEEEEEE-TSSST-T-HHHHHHHHHHHHH-------CSTT-EEEEEETCS-----HGCHH---------HTTEEEESS-
T ss_pred CCCEEEEecCcccc-hhHHHHHHHHHHHHh-------hCCC-ccccccccc-----ccccc---------cceEEEeccc
Confidence 44577777888753 233333444443333 2255 566554442 11111 2578888876
Q ss_pred CChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCC----cceeeeeCCceeeecCCCCChHHHHHHHHHH
Q 011954 348 LTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGG----TMEIVVNGTTGLLHPTGKEGVTPLANNIVKL 423 (474)
Q Consensus 348 ~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g----~~e~v~~~~~G~l~~~~d~~~~~la~~i~~l 423 (474)
.+ .++++...+-++=+ -|.-.++.||+.+|+|+|+-..-| ....+++...|...+..+-+.+++.++|.++
T Consensus 332 PQ-~~lL~hp~v~~fit----HgG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~v 406 (500)
T PF00201_consen 332 PQ-NDLLAHPRVKLFIT----HGGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEEKGVGVVLDKNDLTEEELRAAIREV 406 (500)
T ss_dssp -H-HHHHTSTTEEEEEE----S--HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHTTSEEEEGGGC-SHHHHHHHHHHH
T ss_pred cc-hhhhhcccceeeee----ccccchhhhhhhccCCccCCCCcccCCccceEEEEEeeEEEEEecCCcHHHHHHHHHHH
Confidence 44 46776655544334 345679999999999999986543 2333445557777776554479999999999
Q ss_pred hhCHHHHHHHHH
Q 011954 424 ATHVERRLTMGK 435 (474)
Q Consensus 424 l~~~~~~~~~~~ 435 (474)
++|+..+++..+
T Consensus 407 l~~~~y~~~a~~ 418 (500)
T PF00201_consen 407 LENPSYKENAKR 418 (500)
T ss_dssp HHSHHHHHHHHH
T ss_pred HhhhHHHHHHHH
Confidence 999865544433
|
This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A .... |
| >TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.34 Score=45.90 Aligned_cols=98 Identities=13% Similarity=0.004 Sum_probs=60.5
Q ss_pred CCCEEEEEecccccCcchH--HHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEec
Q 011954 268 DDDLLFAIINSVSRGKGQD--LFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVN 345 (474)
Q Consensus 268 ~~~~~i~~vgrl~~~Kg~~--~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g 345 (474)
+++.+++..|.-.+.|.+. ...+.+..+.+ .+.+++++|+++ +..+..+++.+..+ +..+.|
T Consensus 178 ~~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~---------~~~~~vl~~g~~----~e~~~~~~i~~~~~---~~~l~g 241 (319)
T TIGR02193 178 PAPYAVLLHATSRDDKTWPEERWRELARLLLA---------RGLQIVLPWGND----AEKQRAERIAEALP---GAVVLP 241 (319)
T ss_pred CCCEEEEEeCCCcccCCCCHHHHHHHHHHHHH---------CCCeEEEeCCCH----HHHHHHHHHHhhCC---CCeecC
Confidence 3556777777656677663 45555544432 357788876553 23344455544433 234567
Q ss_pred C--CCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEc
Q 011954 346 K--TLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGT 388 (474)
Q Consensus 346 ~--~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s 388 (474)
. ..++..+++.||++|-+-. .+ +==|.|.|+|+|+-
T Consensus 242 ~~sL~el~ali~~a~l~I~~DS-----gp--~HlAaa~g~P~i~l 279 (319)
T TIGR02193 242 KMSLAEVAALLAGADAVVGVDT-----GL--THLAAALDKPTVTL 279 (319)
T ss_pred CCCHHHHHHHHHcCCEEEeCCC-----hH--HHHHHHcCCCEEEE
Confidence 4 3778889999999996543 22 33477889999975
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.29 Score=46.41 Aligned_cols=99 Identities=12% Similarity=0.042 Sum_probs=57.9
Q ss_pred CCCEEEEEecccccCcchH--HHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEec
Q 011954 268 DDDLLFAIINSVSRGKGQD--LFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVN 345 (474)
Q Consensus 268 ~~~~~i~~vgrl~~~Kg~~--~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g 345 (474)
.++++++..|.-...|.+. ...+.+..+.+ .+.++++.|+++ +..+..+++.+.. ..+.+.|
T Consensus 177 ~~~~i~~~~~~s~~~k~Wp~e~~a~li~~l~~---------~~~~ivl~~G~~----~e~~~~~~i~~~~---~~~~l~g 240 (322)
T PRK10964 177 AGPYLVFLHATTRDDKHWPEAHWRELIGLLAP---------SGLRIKLPWGAE----HEEQRAKRLAEGF---PYVEVLP 240 (322)
T ss_pred CCCeEEEEeCCCcccccCCHHHHHHHHHHHHH---------CCCeEEEeCCCH----HHHHHHHHHHccC---CcceecC
Confidence 3455544555444556554 44444444422 356777764343 1333334433322 3466677
Q ss_pred CC--CChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcC
Q 011954 346 KT--LTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTA 389 (474)
Q Consensus 346 ~~--~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~ 389 (474)
.. .++..+++.||++|-... | .+==|.|+|+|+|+-=
T Consensus 241 ~~sL~elaali~~a~l~I~nDS------G-p~HlA~A~g~p~valf 279 (322)
T PRK10964 241 KLSLEQVARVLAGAKAVVSVDT------G-LSHLTAALDRPNITLY 279 (322)
T ss_pred CCCHHHHHHHHHhCCEEEecCC------c-HHHHHHHhCCCEEEEE
Confidence 53 788899999999996543 2 3445889999999863
|
|
| >PLN02448 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.044 Score=54.69 Aligned_cols=96 Identities=18% Similarity=0.065 Sum_probs=58.4
Q ss_pred CeEEEecCCCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCC----cceeeeeC-CceeeecCC----
Q 011954 339 DHVHFVNKTLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGG----TMEIVVNG-TTGLLHPTG---- 409 (474)
Q Consensus 339 ~~v~~~g~~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g----~~e~v~~~-~~G~l~~~~---- 409 (474)
+++.+.++.. -.+++...++-.+-+ -|.-++++||+++|+|+|+-...+ ....+.+. ..|+-+...
T Consensus 323 ~~~~v~~w~p-Q~~iL~h~~v~~fvt----HgG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~~~~~ 397 (459)
T PLN02448 323 DMGLVVPWCD-QLKVLCHSSVGGFWT----HCGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKREVGEE 397 (459)
T ss_pred CCEEEeccCC-HHHHhccCccceEEe----cCchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEecccccC
Confidence 4677777753 345777777633333 344569999999999999976543 22223331 345555311
Q ss_pred -CCChHHHHHHHHHHhhCH-HHHHHHHHHHHH
Q 011954 410 -KEGVTPLANNIVKLATHV-ERRLTMGKKGYE 439 (474)
Q Consensus 410 -d~~~~~la~~i~~ll~~~-~~~~~~~~~~~~ 439 (474)
..+.+++++++.+++.++ +..++|++++.+
T Consensus 398 ~~~~~~~l~~av~~vl~~~~~~~~~~r~~a~~ 429 (459)
T PLN02448 398 TLVGREEIAELVKRFMDLESEEGKEMRRRAKE 429 (459)
T ss_pred CcCcHHHHHHHHHHHhcCCchhHHHHHHHHHH
Confidence 112799999999999864 334445444443
|
|
| >PLN02670 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.044 Score=54.50 Aligned_cols=115 Identities=14% Similarity=0.056 Sum_probs=66.9
Q ss_pred EEEecCCCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCC----cceeeeeCCceeeecCCC----CC
Q 011954 341 VHFVNKTLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGG----TMEIVVNGTTGLLHPTGK----EG 412 (474)
Q Consensus 341 v~~~g~~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g----~~e~v~~~~~G~l~~~~d----~~ 412 (474)
+.+.++..+ .++++...+-.+-++ +.-++++||+++|+|+|+-...+ ....+..-..|+.++..+ -+
T Consensus 341 ~vv~~W~PQ-~~IL~H~~v~~FvtH----cGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~g~Gv~l~~~~~~~~~~ 415 (472)
T PLN02670 341 MIHVGWVPQ-VKILSHESVGGFLTH----CGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLEVPRDERDGSFT 415 (472)
T ss_pred eEEeCcCCH-HHHhcCcccceeeec----CCcchHHHHHHcCCCEEeCcchhccHHHHHHHHHcCeeEEeeccccCCcCc
Confidence 666677643 457766666333343 34469999999999999975432 222333345666664211 12
Q ss_pred hHHHHHHHHHHhhCHHHHHHHHHHHHHH---HHHhcCHHHHHHHHHHHHHHH
Q 011954 413 VTPLANNIVKLATHVERRLTMGKKGYER---VKDRFLEHHMSQRIALVLREV 461 (474)
Q Consensus 413 ~~~la~~i~~ll~~~~~~~~~~~~~~~~---~~~~fs~~~~~~~~~~~~~~~ 461 (474)
.+++.++|.+++.+++ -+++++++++. +.+.=..+.+++.+++.+.+.
T Consensus 416 ~e~i~~av~~vm~~~~-g~~~r~~a~~l~~~~~~~~~~~~~~~~~~~~l~~~ 466 (472)
T PLN02670 416 SDSVAESVRLAMVDDA-GEEIRDKAKEMRNLFGDMDRNNRYVDELVHYLREN 466 (472)
T ss_pred HHHHHHHHHHHhcCcc-hHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHh
Confidence 7999999999997642 23344444433 333334444555554444443
|
|
| >PF11440 AGT: DNA alpha-glucosyltransferase; InterPro: IPR016223 The T4 bacteriophage of E | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.12 Score=46.09 Aligned_cols=312 Identities=12% Similarity=0.063 Sum_probs=140.8
Q ss_pred CChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhcccchhccceeeeehhcH-HHHhhhcCCCEEEEcccchhhHH
Q 011954 87 SGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEHKMLDRGVQVLSAKGE-KAINTALNADLVVLNTAVAGKWL 165 (474)
Q Consensus 87 gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~DiV~~~~~~~~~~~ 165 (474)
.|+.+...++-....++|+++.++.........+ -........+..+..... ..+..-..+||+..++..+...-
T Consensus 1 CGVTr~a~e~~~wf~KNg~~~~i~~a~e~sftR~----dsH~~~~~si~k~~~~e~de~v~~vN~yDI~m~nSvPa~~vq 76 (355)
T PF11440_consen 1 CGVTRNALEMRDWFDKNGVEFTIVSADEKSFTRP----DSHDSKSFSIPKYLAKEYDETVKKVNDYDIVMFNSVPATKVQ 76 (355)
T ss_dssp SHHHHHHHHHHHHHHHTT-EEEEEEETSS--TTT----TSSS-TTTEEEE-TTTHHHHHHHHHTSSSEEEEEE--BTTS-
T ss_pred CCccccHHHHHHHHHhcCCeeEEEEecccccCCc----cccccceeeeehhhHHHHHHHHHHhhccCEEEEecccCchHH
Confidence 3677888888889999999999998543221110 011222233333322222 23334468999999874332211
Q ss_pred hH---Hhhhcccccc--cceeeeeeccccccch--hhhhhcccccccccccccccHHHHHHhHH-HHhcCC---CCCeEE
Q 011954 166 DG---VLKDKVSQVL--PKVLWWIHEMRGHYFK--LEYVKHLPFVAGAMIDSYTTAEYWKNRTR-ERLGIR---MPETYV 234 (474)
Q Consensus 166 ~~---~~~~~~~~~~--~~~v~~~h~~~~~~~~--~~~~~~~~~~~~~~~~s~~~~~~~~~~~~-~~~~~~---~~ki~v 234 (474)
.. .....+..+. .+++...|+....... ..+...++.+|.+.+.+...- +...+. .-++-. .+++.-
T Consensus 77 E~~iNnY~kii~~Ik~~ik~V~~~Hdh~~lsI~rn~~le~~m~~~DvIfshs~~g~--f~kv~m~~l~Ps~~~l~~~i~~ 154 (355)
T PF11440_consen 77 EAIINNYEKIIKKIKPSIKVVGFMHDHNKLSIDRNPYLEGTMNEMDVIFSHSDNGW--FSKVLMKELLPSKVSLFDRIKK 154 (355)
T ss_dssp HHHHHHHHHHHHCS-TTSEEEEEE---SHHHHTTBSSHHHHHHH-SEEEES-TTSH--HHHTHHHHHS-SS--SSS----
T ss_pred HHHHHHHHHHHHhccccceeEEEeeccceeeccccccHHHHHHhhcEEEeccccch--HHHHHHHhhccccCchhhhhhh
Confidence 11 1122222232 2446677765322221 123344556666666554321 111111 111111 123333
Q ss_pred EeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEE---EEecccccCcchHHHHHHHHHHHHHHHHhccCCCcEEE
Q 011954 235 VHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLF---AIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHA 311 (474)
Q Consensus 235 i~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i---~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l 311 (474)
.|... .|++..+ ....|+.+-.+...+.. +|+||.+..||...+++...+.++ .++..-
T Consensus 155 ~p~v~---nfqpp~~-------i~~~Rstywkd~se~nmnv~~yigR~Tt~kG~~~mfD~h~~~lK--------~~~~~t 216 (355)
T PF11440_consen 155 FPMVF---NFQPPMD-------INKYRSTYWKDVSEKNMNVNRYIGRQTTWKGPRRMFDLHEKILK--------PAGFKT 216 (355)
T ss_dssp ---EE---E----B--------HHHHHHHH---GGGSEEEEEEEE--SSGGG-HHHHHHHHHHTTT--------TTT-EE
T ss_pred cceee---ecCCccc-------HHHHHHHHhhhhHhhhcccceeeeeeeeecCcHHHhhhHHHhcC--------CcchhH
Confidence 33221 1222111 23445555544444555 799999999999999998887653 367888
Q ss_pred EEEcCCCCcCchHHHHHHH----------HHHHcCC--CCeEEEecC-C-CChHHHHhcCCEEEEcCCC----CCCCCch
Q 011954 312 VVVGSDMNAQTKFETELRN----------FVAEKKI--QDHVHFVNK-T-LTVSPYLASIDVLVQNSQA----RGECFGR 373 (474)
Q Consensus 312 ~i~G~g~~~~~~~~~~l~~----------~~~~~~l--~~~v~~~g~-~-~~~~~~~~~adv~v~ps~~----~~E~~~~ 373 (474)
++-|-.. ++....-+.. .+.+..+ ...+-++|. + +++.+.++.+-..+.-+.. -.+..-.
T Consensus 217 ~~~Gier--S~A~~~i~d~~~~~~y~~~~~~~~~~~~pN~~~~v~~~Yi~~E~~~~Maks~Fgy~~~k~~~~y~~r~mEY 294 (355)
T PF11440_consen 217 IMEGIER--SPAKISIKDHGIPYEYYPKLDCDEPKPAPNSPVPVYGPYIRSEGLERMAKSLFGYQLSKLQQKYLQRSMEY 294 (355)
T ss_dssp EEE---S--STHHHHHHHTT--EEEE-CTGGGG---SSS--EEEESS--HHHHHHHHHTEEEEEE-----GGG-SS---H
T ss_pred Hhhhhhc--CCceeeeecCCcccccCccccccCcccCCCCcceecchhhhHHHHHHHhhccceeecHHHHHHHHHhhhhh
Confidence 8888531 1211111111 0001111 123666674 3 7788888887776654431 0234667
Q ss_pred HHHHHHhcCC-CEEEcCCCCcce-------eeeeCCceeeecCCCCChHHHHHHHHHHhhC
Q 011954 374 ITIEAMAFQL-PVLGTAAGGTME-------IVVNGTTGLLHPTGKEGVTPLANNIVKLATH 426 (474)
Q Consensus 374 ~~~EAma~G~-PvI~s~~~g~~e-------~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~ 426 (474)
+-+|..|||. ||.-...|..-- ++......+.++..| .++-.+.|.++.++
T Consensus 295 t~iE~~A~GtIPVF~k~~GEN~r~~~D~~~~~~~~~~~I~~De~d--le~T~ekl~E~a~~ 353 (355)
T PF11440_consen 295 TQIELIAVGTIPVFDKSWGENNRFTLDGTRYIDHPYSAIYFDEND--LESTVEKLIEVANN 353 (355)
T ss_dssp HHHHHHHCTSEEEEEHHHHHHSB-TTTSSBGGSS--S-EEE-TTS--HHHHHHHHHHHHT-
T ss_pred heeeeeeeceeeeeeccccccceeeecCceeeccCcceeEeccch--HHHHHHHHHHHhcc
Confidence 8999999996 676665543211 233344566777777 88888888877665
|
coli protects its DNA via two glycosyltransferases which glucosylate 5-hydroxymethyl cytosines (5-HMC) using UDP-glucose. These two proteins are the retaining alpha-glucosyltransferase (AGT) and the inverting beta-glucosyltransferase (BGT). The proteins in this family are AGT. AGT adopts the GT-B fold and binds both the sugar donor and acceptor to the C-terminal domain. There is evidence for a role of AGT in the base-flipping mechanism and for its specific recognition of the acceptor base [].; PDB: 1YA6_B 1Y8Z_B 1Y6F_B 1XV5_A 1Y6G_B. |
| >TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.39 Score=44.98 Aligned_cols=87 Identities=10% Similarity=-0.044 Sum_probs=50.5
Q ss_pred hHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCCCChHHHHhcCCEEEEcC
Q 011954 285 QDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYLASIDVLVQNS 364 (474)
Q Consensus 285 ~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv~v~ps 364 (474)
.+.+.+++..+.+. .+.+++++.-..+ ......+++...+.-...+......+++..+++.||++|-..
T Consensus 190 ~~~l~~~l~~l~~~--------~g~~v~~i~~~~~---~D~~~~~~l~~~~~~~~~i~~~~~~~e~~~~i~~~~~vI~~R 258 (298)
T TIGR03609 190 LLRLLRALDRLQRD--------TGAFVLFLPFQQP---QDLPLARALRDQLLGPAEVLSPLDPEELLGLFASARLVIGMR 258 (298)
T ss_pred HHHHHHHHHHHHHh--------hCCeEEEEeCCcc---hhHHHHHHHHHhcCCCcEEEecCCHHHHHHHHhhCCEEEEec
Confidence 44555555555431 2455555443221 133444555555543334432223467888999999888655
Q ss_pred CCCCCCCchHHHHHHhcCCCEEEcC
Q 011954 365 QARGECFGRITIEAMAFQLPVLGTA 389 (474)
Q Consensus 365 ~~~~E~~~~~~~EAma~G~PvI~s~ 389 (474)
. -.++=|+.+|+|+|+-.
T Consensus 259 l-------H~~I~A~~~gvP~i~i~ 276 (298)
T TIGR03609 259 L-------HALILAAAAGVPFVALS 276 (298)
T ss_pred h-------HHHHHHHHcCCCEEEee
Confidence 4 26777999999999764
|
The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395). |
| >PLN03007 UDP-glucosyltransferase family protein | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.11 Score=52.16 Aligned_cols=84 Identities=12% Similarity=0.029 Sum_probs=52.7
Q ss_pred CeEEEecCCCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCC----cceeeee-CCceeee-------
Q 011954 339 DHVHFVNKTLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGG----TMEIVVN-GTTGLLH------- 406 (474)
Q Consensus 339 ~~v~~~g~~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g----~~e~v~~-~~~G~l~------- 406 (474)
.++++.++..+ .+++..+++-++-++ |.-++++||+++|+|+|+-...+ ....+.+ -..|+-+
T Consensus 345 ~g~~v~~w~PQ-~~iL~h~~v~~fvtH----~G~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~ 419 (482)
T PLN03007 345 KGLIIRGWAPQ-VLILDHQATGGFVTH----CGWNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSVGAKKLVK 419 (482)
T ss_pred CCEEEecCCCH-HHHhccCccceeeec----CcchHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEeccccccc
Confidence 57888888744 578888877333343 33469999999999999976432 1111111 1223222
Q ss_pred -cCCCCChHHHHHHHHHHhhCH
Q 011954 407 -PTGKEGVTPLANNIVKLATHV 427 (474)
Q Consensus 407 -~~~d~~~~~la~~i~~ll~~~ 427 (474)
+.+..+.+++++++++++.++
T Consensus 420 ~~~~~~~~~~l~~av~~~m~~~ 441 (482)
T PLN03007 420 VKGDFISREKVEKAVREVIVGE 441 (482)
T ss_pred cccCcccHHHHHHHHHHHhcCc
Confidence 111112889999999999875
|
|
| >PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.045 Score=54.22 Aligned_cols=91 Identities=15% Similarity=0.141 Sum_probs=56.3
Q ss_pred CeEEEecCCCChHHHHhcCCE--EEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCC----cceeeeeC-CceeeecCCCC
Q 011954 339 DHVHFVNKTLTVSPYLASIDV--LVQNSQARGECFGRITIEAMAFQLPVLGTAAGG----TMEIVVNG-TTGLLHPTGKE 411 (474)
Q Consensus 339 ~~v~~~g~~~~~~~~~~~adv--~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g----~~e~v~~~-~~G~l~~~~d~ 411 (474)
++..+.++..+ .+++...++ || + -+.-++++||+++|+|+|+-...+ ....+.+. +.|+-+. ++.
T Consensus 324 ~~g~v~~w~PQ-~~iL~h~~v~~fv--t----H~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~-~~~ 395 (451)
T PLN02410 324 GRGYIVKWAPQ-KEVLSHPAVGGFW--S----HCGWNSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVE-GDL 395 (451)
T ss_pred CCeEEEccCCH-HHHhCCCccCeee--e----cCchhHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeC-Ccc
Confidence 46666677533 346766555 65 3 233459999999999999875432 22223222 4666553 222
Q ss_pred ChHHHHHHHHHHhhCHHHHHHHHHHHH
Q 011954 412 GVTPLANNIVKLATHVERRLTMGKKGY 438 (474)
Q Consensus 412 ~~~~la~~i~~ll~~~~~~~~~~~~~~ 438 (474)
+.+++++++.+++.+++ -+++.++++
T Consensus 396 ~~~~v~~av~~lm~~~~-~~~~r~~a~ 421 (451)
T PLN02410 396 DRGAVERAVKRLMVEEE-GEEMRKRAI 421 (451)
T ss_pred cHHHHHHHHHHHHcCCc-HHHHHHHHH
Confidence 37899999999998654 334444444
|
|
| >PLN02562 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.064 Score=53.24 Aligned_cols=88 Identities=15% Similarity=0.070 Sum_probs=57.7
Q ss_pred CeEEEecCCCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCC----cceeeee-CCceeeecCCCCCh
Q 011954 339 DHVHFVNKTLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGG----TMEIVVN-GTTGLLHPTGKEGV 413 (474)
Q Consensus 339 ~~v~~~g~~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g----~~e~v~~-~~~G~l~~~~d~~~ 413 (474)
+++.+.++. .-.++++..++-++-++ |.-.+++||+.+|+|+|+-...+ ....+.+ -..|+-+..-+ .
T Consensus 328 ~~~~v~~w~-PQ~~iL~h~~v~~fvtH----~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~--~ 400 (448)
T PLN02562 328 KQGKVVSWA-PQLEVLKHQAVGCYLTH----CGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRISGFG--Q 400 (448)
T ss_pred cCEEEEecC-CHHHHhCCCccceEEec----CcchhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEeCCCC--H
Confidence 577777876 33567777665444343 33469999999999999875432 2233332 24555554344 8
Q ss_pred HHHHHHHHHHhhCHHHHHHH
Q 011954 414 TPLANNIVKLATHVERRLTM 433 (474)
Q Consensus 414 ~~la~~i~~ll~~~~~~~~~ 433 (474)
+++++++.+++.+++.+++.
T Consensus 401 ~~l~~~v~~~l~~~~~r~~a 420 (448)
T PLN02562 401 KEVEEGLRKVMEDSGMGERL 420 (448)
T ss_pred HHHHHHHHHHhCCHHHHHHH
Confidence 99999999999887655443
|
|
| >PLN03004 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.079 Score=52.41 Aligned_cols=85 Identities=11% Similarity=0.024 Sum_probs=57.4
Q ss_pred CeEEEecCCCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCC----Ccceeeee-CCceeeecCC---C
Q 011954 339 DHVHFVNKTLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAG----GTMEIVVN-GTTGLLHPTG---K 410 (474)
Q Consensus 339 ~~v~~~g~~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~----g~~e~v~~-~~~G~l~~~~---d 410 (474)
.++.+.++..+ .++++.+++-.+-++ +.-++++||+++|+|+|+-... .....+.+ -+.|+.++.+ .
T Consensus 334 ~g~~v~~W~PQ-~~iL~H~~v~~FvTH----~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~ 408 (451)
T PLN03004 334 KGMVVKSWAPQ-VPVLNHKAVGGFVTH----CGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISMNESETGF 408 (451)
T ss_pred CcEEEEeeCCH-HHHhCCCccceEecc----CcchHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEecCCcCCc
Confidence 46888887644 458888888444343 3446999999999999997543 22333332 2567666422 1
Q ss_pred CChHHHHHHHHHHhhCHH
Q 011954 411 EGVTPLANNIVKLATHVE 428 (474)
Q Consensus 411 ~~~~~la~~i~~ll~~~~ 428 (474)
.+.++++++|.+++++++
T Consensus 409 ~~~e~l~~av~~vm~~~~ 426 (451)
T PLN03004 409 VSSTEVEKRVQEIIGECP 426 (451)
T ss_pred cCHHHHHHHHHHHhcCHH
Confidence 138999999999998754
|
|
| >PF15024 Glyco_transf_18: Glycosyltransferase family 18 | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.79 Score=45.68 Aligned_cols=146 Identities=13% Similarity=0.077 Sum_probs=93.0
Q ss_pred eccc-ccCcchHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEec--CCCChHH
Q 011954 276 INSV-SRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVN--KTLTVSP 352 (474)
Q Consensus 276 vgrl-~~~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g--~~~~~~~ 352 (474)
-|.- .-+||-+..++++.+. -.++-.|.+... ....+- .-|.=+| ..+++..
T Consensus 283 yGK~~~~w~~k~~~l~~l~~~-----------~eih~tV~~~~~-----~~~~~P---------~~V~NHG~l~~~ef~~ 337 (559)
T PF15024_consen 283 YGKERYMWKGKEKYLDVLHKY-----------MEIHGTVYDEPQ-----RPPNVP---------SFVKNHGILSGDEFQQ 337 (559)
T ss_pred EccchhhhcCcHHHHHHHHhh-----------cEEEEEeccCCC-----CCcccc---------hhhhhcCcCCHHHHHH
Confidence 3443 3367778787777543 456766655432 112222 2333444 3478999
Q ss_pred HHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCc---------------ceeee---------eCCceeeecC
Q 011954 353 YLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGT---------------MEIVV---------NGTTGLLHPT 408 (474)
Q Consensus 353 ~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~---------------~e~v~---------~~~~G~l~~~ 408 (474)
+++.+.|||-.... .| |-+.+||+|.|+|-|-...... +++-. ..-.-+.++-
T Consensus 338 lL~~akvfiGlGfP-~E--gPaPlEAia~G~vFlNp~~~pp~s~~n~~ff~~KPt~r~~~SQhPY~e~~iG~PhVytVd~ 414 (559)
T PF15024_consen 338 LLRKAKVFIGLGFP-YE--GPAPLEAIANGCVFLNPRFNPPHSRLNTEFFKGKPTLREWTSQHPYAEEFIGEPHVYTVDI 414 (559)
T ss_pred HHHhhhEeeecCCC-CC--CCChHHHHHcCCccccccCCCCCcccccccccCCCCcceeccCChHHHhhCCCCeEEEEcC
Confidence 99999999965542 44 4589999999999987653211 12110 1123456677
Q ss_pred CCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 011954 409 GKEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRFLEHHMSQRIALVLRE 460 (474)
Q Consensus 409 ~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~ 460 (474)
+| .+++.+||.+++..+- .-++--.|+-+.|.+++..+++.
T Consensus 415 ~n--~~~v~~Avk~il~~~v---------~Py~P~efT~egmLeRv~~~ie~ 455 (559)
T PF15024_consen 415 NN--STEVEAAVKAILATPV---------EPYLPYEFTCEGMLERVNALIEK 455 (559)
T ss_pred CC--HHHHHHHHHHHHhcCC---------CCcCCcccCHHHHHHHHHHHHHh
Confidence 77 8999999999987542 12444568999998888777764
|
|
| >PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.44 Score=47.74 Aligned_cols=83 Identities=11% Similarity=0.123 Sum_probs=51.6
Q ss_pred CeEEEecCCCChHHHHhc--CCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCC----cceeee-eCCceeeecCC--
Q 011954 339 DHVHFVNKTLTVSPYLAS--IDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGG----TMEIVV-NGTTGLLHPTG-- 409 (474)
Q Consensus 339 ~~v~~~g~~~~~~~~~~~--adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g----~~e~v~-~~~~G~l~~~~-- 409 (474)
.++++.++..+ .+++.. +++|| .-+.-++++||+++|+|+|+-...+ ....+. .-+.|+-+..+
T Consensus 343 ~g~~v~~w~PQ-~~vL~h~~v~~fv------tH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~~~~ 415 (477)
T PLN02863 343 RGLVIRGWAPQ-VAILSHRAVGAFL------THCGWNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCEGAD 415 (477)
T ss_pred CCEEecCCCCH-HHHhcCCCcCeEE------ecCCchHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEeccCCC
Confidence 46777788744 556765 56666 3344569999999999999875432 222222 22456555221
Q ss_pred -CCChHHHHHHHHHHhh-CHH
Q 011954 410 -KEGVTPLANNIVKLAT-HVE 428 (474)
Q Consensus 410 -d~~~~~la~~i~~ll~-~~~ 428 (474)
..+.+++++++.+++. +++
T Consensus 416 ~~~~~~~v~~~v~~~m~~~~~ 436 (477)
T PLN02863 416 TVPDSDELARVFMESVSENQV 436 (477)
T ss_pred CCcCHHHHHHHHHHHhhccHH
Confidence 1126899999999883 444
|
|
| >PLN02167 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.28 Score=49.16 Aligned_cols=81 Identities=14% Similarity=0.030 Sum_probs=49.5
Q ss_pred eEEEecCCCChHHHHhcC--CEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCC----cc-eeeeeCCceeeecCC---
Q 011954 340 HVHFVNKTLTVSPYLASI--DVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGG----TM-EIVVNGTTGLLHPTG--- 409 (474)
Q Consensus 340 ~v~~~g~~~~~~~~~~~a--dv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g----~~-e~v~~~~~G~l~~~~--- 409 (474)
+..+.++.. -..+++.. +.|| + -+.-++++||+++|+|+|+-...+ .. -++..-+.|+.+...
T Consensus 341 rg~v~~w~P-Q~~iL~h~~vg~fv--t----H~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~ 413 (475)
T PLN02167 341 RGLVCGWAP-QVEILAHKAIGGFV--S----HCGWNSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRLDYVS 413 (475)
T ss_pred CeeeeccCC-HHHHhcCcccCeEE--e----eCCcccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeeccccc
Confidence 455667753 34567664 4566 2 233358999999999999875432 11 123233456655321
Q ss_pred ----CCChHHHHHHHHHHhhCH
Q 011954 410 ----KEGVTPLANNIVKLATHV 427 (474)
Q Consensus 410 ----d~~~~~la~~i~~ll~~~ 427 (474)
..+.+++++++.+++.++
T Consensus 414 ~~~~~~~~~~l~~av~~~m~~~ 435 (475)
T PLN02167 414 AYGEIVKADEIAGAVRSLMDGE 435 (475)
T ss_pred ccCCcccHHHHHHHHHHHhcCC
Confidence 112789999999999753
|
|
| >COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=95.72 E-value=1.4 Score=39.27 Aligned_cols=109 Identities=9% Similarity=0.023 Sum_probs=65.6
Q ss_pred CCCEEEEEecccccCcch--HHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHH-cCCCCeEEEe
Q 011954 268 DDDLLFAIINSVSRGKGQ--DLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAE-KKIQDHVHFV 344 (474)
Q Consensus 268 ~~~~~i~~vgrl~~~Kg~--~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~-~~l~~~v~~~ 344 (474)
...++-++||.-.+.=.. |.+.+....+.+.+.+ ....|++--+-- -.+..+..++. +.-..-+.+-
T Consensus 160 ~rq~vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l~~-----~g~~~lisfSRR-----Tp~~~~s~l~~~l~s~~~i~w~ 229 (329)
T COG3660 160 PRQRVAVLVGGNNKAFVFQEDKAHQFASLLVKILEN-----QGGSFLISFSRR-----TPDTVKSILKNNLNSSPGIVWN 229 (329)
T ss_pred CCceEEEEecCCCCCCccCHHHHHHHHHHHHHHHHh-----CCceEEEEeecC-----CcHHHHHHHHhccccCceeEeC
Confidence 345777778865543332 4444545555555543 456677766642 34556666665 4333344444
Q ss_pred cC---CCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCC
Q 011954 345 NK---TLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAG 391 (474)
Q Consensus 345 g~---~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~ 391 (474)
+. .+-..+++++||.++.+.- -=.-..||.+.|+||.+.--.
T Consensus 230 ~~d~g~NPY~~~La~Adyii~TaD-----SinM~sEAasTgkPv~~~~~~ 274 (329)
T COG3660 230 NEDTGYNPYIDMLAAADYIISTAD-----SINMCSEAASTGKPVFILEPP 274 (329)
T ss_pred CCCCCCCchHHHHhhcceEEEecc-----hhhhhHHHhccCCCeEEEecC
Confidence 43 1446788999999998753 123467999999999776433
|
|
| >COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=95.62 E-value=2.2 Score=40.79 Aligned_cols=100 Identities=18% Similarity=0.134 Sum_probs=63.5
Q ss_pred HHHHHHHHHHHcCCCCeEEEecCC--CChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCC----Ccceee
Q 011954 324 FETELRNFVAEKKIQDHVHFVNKT--LTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAG----GTMEIV 397 (474)
Q Consensus 324 ~~~~l~~~~~~~~l~~~v~~~g~~--~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~----g~~e~v 397 (474)
...-.+.++....-..++.+.... +++...++++|+.|-.-. -+++=||+.|+|+|+-... ++.+-+
T Consensus 251 d~~va~~ia~~~~~~~~i~~~~d~~~~~~~~~l~~~dl~Vg~R~-------HsaI~al~~g~p~i~i~Y~~K~~~l~~~~ 323 (385)
T COG2327 251 DLAVADAIAQLVLDSAEILVSSDEYAEELGGILAACDLIVGMRL-------HSAIMALAFGVPAIAIAYDPKVRGLMQDL 323 (385)
T ss_pred hhHHHHHHHhhcCCccceEeecchHHHHHHHHhccCceEEeehh-------HHHHHHHhcCCCeEEEeecHHHHHHHHHc
Confidence 445555555555544677776643 466778999999985443 2567799999999987644 332222
Q ss_pred eeCCceeeecCCCCChHHHHHHHHHHhh-CHHHHHH
Q 011954 398 VNGTTGLLHPTGKEGVTPLANNIVKLAT-HVERRLT 432 (474)
Q Consensus 398 ~~~~~G~l~~~~d~~~~~la~~i~~ll~-~~~~~~~ 432 (474)
+-.++..+..+.|.+.+.+...+.+. .++.+++
T Consensus 324 --gl~~~~~~i~~~~~~~l~~~~~e~~~~~~~~~~~ 357 (385)
T COG2327 324 --GLPGFAIDIDPLDAEILSAVVLERLTKLDELRER 357 (385)
T ss_pred --CCCcccccCCCCchHHHHHHHHHHHhccHHHHhh
Confidence 33445555554447888888877776 4554443
|
|
| >PLN02555 limonoid glucosyltransferase | Back alignment and domain information |
|---|
Probab=95.49 E-value=0.53 Score=47.12 Aligned_cols=94 Identities=17% Similarity=0.155 Sum_probs=57.1
Q ss_pred CeEEEecCCCChHHHH--hcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCC----cceeeeeC-Cceeeec----
Q 011954 339 DHVHFVNKTLTVSPYL--ASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGG----TMEIVVNG-TTGLLHP---- 407 (474)
Q Consensus 339 ~~v~~~g~~~~~~~~~--~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g----~~e~v~~~-~~G~l~~---- 407 (474)
+++.+.++..+ .+++ .++.+|| .-+.-++++||+.+|+|+|+-..-+ ....+.+. +.|+-+.
T Consensus 337 ~~g~v~~W~PQ-~~iL~H~~v~~Fv------tH~G~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~~~~~ 409 (480)
T PLN02555 337 DKGKIVQWCPQ-EKVLAHPSVACFV------THCGWNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLCRGEA 409 (480)
T ss_pred CceEEEecCCH-HHHhCCCccCeEE------ecCCcchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEccCCcc
Confidence 56777787643 4466 4466666 3334569999999999999876432 12222222 4555542
Q ss_pred -CCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHH
Q 011954 408 -TGKEGVTPLANNIVKLATHVERRLTMGKKGYER 440 (474)
Q Consensus 408 -~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~ 440 (474)
.+.-+.+++++++.+++.+++ .++|++++++.
T Consensus 410 ~~~~v~~~~v~~~v~~vm~~~~-g~~~r~ra~~l 442 (480)
T PLN02555 410 ENKLITREEVAECLLEATVGEK-AAELKQNALKW 442 (480)
T ss_pred ccCcCcHHHHHHHHHHHhcCch-HHHHHHHHHHH
Confidence 111127899999999997643 34455554443
|
|
| >PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes | Back alignment and domain information |
|---|
Probab=95.47 E-value=0.23 Score=41.04 Aligned_cols=130 Identities=14% Similarity=0.052 Sum_probs=69.4
Q ss_pred CEEEEEecCCCCCChh-HHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhcccchhccceeeeehhcHHHHhhhcCCCE
Q 011954 75 KLVLLVSHELSLSGGP-LLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEHKMLDRGVQVLSAKGEKAINTALNADL 153 (474)
Q Consensus 75 ~kIl~v~~~~~~gG~~-~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di 153 (474)
||||++.+++ ||.- ..+..|++.+ .|+++++|...... .-.+......+ ...+.....+|+
T Consensus 1 M~ILlle~y~--ggSHk~~~~~L~~~~---~~~~~lltLP~r~w--------~WRmRg~AL~~-----a~~~~~~~~~dl 62 (168)
T PF12038_consen 1 MRILLLEPYY--GGSHKQWADGLAAHS---EHEWTLLTLPARKW--------HWRMRGAALYF-----AQQIPLSHSYDL 62 (168)
T ss_pred CeEEEEcccc--ccCHHHHHHHHHHhc---cCCEEEEEcCCCcc--------ccccCCCHHHH-----hhccccccCCCE
Confidence 7899999865 4543 3344444444 48999999654321 11111111111 133444577899
Q ss_pred EEEcccchhhHHhHHhhhcccccccceeeeeeccccccchhh---------hh--hcccccccccccccccHHHHHHhHH
Q 011954 154 VVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYFKLE---------YV--KHLPFVAGAMIDSYTTAEYWKNRTR 222 (474)
Q Consensus 154 V~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~---------~~--~~~~~~~~~~~~s~~~~~~~~~~~~ 222 (474)
|++.+...-.-+..+.. .+ -.+|.+.++|+..-.|-... +. ...--+|.++.+|....+.+.+.+.
T Consensus 63 l~aTsmldLa~l~gL~p-~l--~~~p~ilYFHENQl~YP~~~~~~rd~~~~~~ni~saLaAD~v~FNS~~nr~sFL~~~~ 139 (168)
T PF12038_consen 63 LFATSMLDLATLRGLRP-DL--ANVPKILYFHENQLAYPVSPGQERDFQYGMNNIYSALAADRVVFNSAFNRDSFLDGIP 139 (168)
T ss_pred EEeeccccHHHHHhhcc-CC--CCCCEEEEEecCcccCCCCCCccccccHHHHHHHHHHhceeeeecchhhHHHHHHHHH
Confidence 99987543332222222 11 23688888998643222111 11 1113456677777777777665544
Q ss_pred HHh
Q 011954 223 ERL 225 (474)
Q Consensus 223 ~~~ 225 (474)
.-+
T Consensus 140 ~fL 142 (168)
T PF12038_consen 140 SFL 142 (168)
T ss_pred HHH
Confidence 433
|
It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important. |
| >PLN02152 indole-3-acetate beta-glucosyltransferase | Back alignment and domain information |
|---|
Probab=95.45 E-value=0.24 Score=49.08 Aligned_cols=84 Identities=11% Similarity=0.042 Sum_probs=52.2
Q ss_pred CeEEEecCCCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCC----cceeeeeC-CceeeecC--CC-
Q 011954 339 DHVHFVNKTLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGG----TMEIVVNG-TTGLLHPT--GK- 410 (474)
Q Consensus 339 ~~v~~~g~~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g----~~e~v~~~-~~G~l~~~--~d- 410 (474)
++..+.++..+ .++++..++-++-++ +..++++||+.+|+|+|+-...+ ....+.+. +.|+-+.. .+
T Consensus 327 ~~g~v~~W~PQ-~~iL~h~~vg~fvtH----~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~ 401 (455)
T PLN02152 327 EVGMIVSWCSQ-IEVLRHRAVGCFVTH----CGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVRENSEGL 401 (455)
T ss_pred CCeEEEeeCCH-HHHhCCcccceEEee----CCcccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEeecCcCCc
Confidence 56677787643 457777776444443 34569999999999999875432 22222221 23444321 11
Q ss_pred CChHHHHHHHHHHhhCH
Q 011954 411 EGVTPLANNIVKLATHV 427 (474)
Q Consensus 411 ~~~~~la~~i~~ll~~~ 427 (474)
.+.+++++++.++++++
T Consensus 402 ~~~e~l~~av~~vm~~~ 418 (455)
T PLN02152 402 VERGEIRRCLEAVMEEK 418 (455)
T ss_pred CcHHHHHHHHHHHHhhh
Confidence 12789999999999754
|
|
| >PLN02210 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=95.44 E-value=0.38 Score=47.87 Aligned_cols=84 Identities=13% Similarity=0.111 Sum_probs=52.5
Q ss_pred eEEEecCCCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCC----cceeeee-CCceeeecCC----C
Q 011954 340 HVHFVNKTLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGG----TMEIVVN-GTTGLLHPTG----K 410 (474)
Q Consensus 340 ~v~~~g~~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g----~~e~v~~-~~~G~l~~~~----d 410 (474)
+..+.++..+ .++++.+++-.+-++ +.-++++||+.+|+|+|+-...+ ....+.+ -+.|+.+... .
T Consensus 325 ~g~v~~w~PQ-~~iL~h~~vg~FitH----~G~nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~ 399 (456)
T PLN02210 325 QGVVLEWSPQ-EKILSHMAISCFVTH----CGWNSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAVDGE 399 (456)
T ss_pred CeEEEecCCH-HHHhcCcCcCeEEee----CCcccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccccCCc
Confidence 4445677644 457888874333332 23358999999999999975432 2223333 3466665321 1
Q ss_pred CChHHHHHHHHHHhhCHH
Q 011954 411 EGVTPLANNIVKLATHVE 428 (474)
Q Consensus 411 ~~~~~la~~i~~ll~~~~ 428 (474)
-+.+++++++++++.+++
T Consensus 400 ~~~~~l~~av~~~m~~~~ 417 (456)
T PLN02210 400 LKVEEVERCIEAVTEGPA 417 (456)
T ss_pred CCHHHHHHHHHHHhcCch
Confidence 127899999999997643
|
|
| >PLN02173 UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=95.27 E-value=0.46 Score=47.11 Aligned_cols=95 Identities=11% Similarity=0.098 Sum_probs=59.1
Q ss_pred CeEEEecCCCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCC----cceeeeeC-CceeeecCCC---
Q 011954 339 DHVHFVNKTLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGG----TMEIVVNG-TTGLLHPTGK--- 410 (474)
Q Consensus 339 ~~v~~~g~~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g----~~e~v~~~-~~G~l~~~~d--- 410 (474)
+++.+.++..+ .++++..++-.+-++ +..++++||+++|+|+|+-..-+ ....+.+. ..|+-+...+
T Consensus 317 ~~~~i~~W~PQ-~~iL~H~~v~~FvtH----cGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~~~~~~ 391 (449)
T PLN02173 317 DKSLVLKWSPQ-LQVLSNKAIGCFMTH----CGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKAEKESG 391 (449)
T ss_pred CceEEeCCCCH-HHHhCCCccceEEec----CccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEeecccCC
Confidence 57888888643 457777775444443 34579999999999999975432 22233322 3555543211
Q ss_pred -CChHHHHHHHHHHhhCHHHHHHHHHHHHH
Q 011954 411 -EGVTPLANNIVKLATHVERRLTMGKKGYE 439 (474)
Q Consensus 411 -~~~~~la~~i~~ll~~~~~~~~~~~~~~~ 439 (474)
.+.+++++++.+++.+++ .+++++++++
T Consensus 392 ~~~~e~v~~av~~vm~~~~-~~~~r~~a~~ 420 (449)
T PLN02173 392 IAKREEIEFSIKEVMEGEK-SKEMKENAGK 420 (449)
T ss_pred cccHHHHHHHHHHHhcCCh-HHHHHHHHHH
Confidence 027999999999997643 2444444443
|
|
| >PLN00414 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=95.25 E-value=1.3 Score=43.96 Aligned_cols=94 Identities=6% Similarity=-0.044 Sum_probs=58.9
Q ss_pred EEEecCCCChHHHHhcC--CEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCC----cceeee-eCCceeeecCC---C
Q 011954 341 VHFVNKTLTVSPYLASI--DVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGG----TMEIVV-NGTTGLLHPTG---K 410 (474)
Q Consensus 341 v~~~g~~~~~~~~~~~a--dv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g----~~e~v~-~~~~G~l~~~~---d 410 (474)
..+.++..+ .+++... +.|| .-+.-++++||+.+|+|+|+-...+ ....+. .-..|+.+..+ .
T Consensus 314 ~vv~~w~PQ-~~vL~h~~v~~fv------tH~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~ 386 (446)
T PLN00414 314 IVWEGWVEQ-PLILSHPSVGCFV------NHCGFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQREDSGW 386 (446)
T ss_pred eEEeccCCH-HHHhcCCccceEE------ecCchhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEeccccCCc
Confidence 455676533 4567666 4466 3344579999999999999975432 222332 23456555321 1
Q ss_pred CChHHHHHHHHHHhhCH-HHHHHHHHHHHHHH
Q 011954 411 EGVTPLANNIVKLATHV-ERRLTMGKKGYERV 441 (474)
Q Consensus 411 ~~~~~la~~i~~ll~~~-~~~~~~~~~~~~~~ 441 (474)
.+.+++++++.+++.++ +..+++.+++++.-
T Consensus 387 ~~~~~i~~~v~~~m~~~~e~g~~~r~~a~~~~ 418 (446)
T PLN00414 387 FSKESLRDTVKSVMDKDSEIGNLVKRNHKKLK 418 (446)
T ss_pred cCHHHHHHHHHHHhcCChhhHHHHHHHHHHHH
Confidence 23899999999999754 45666666666543
|
|
| >PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=95.21 E-value=0.75 Score=41.62 Aligned_cols=101 Identities=17% Similarity=0.216 Sum_probs=56.4
Q ss_pred CCCEEEEEecccccCcchHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchH-HHHH-HHHHHHcCCCCeEEEec
Q 011954 268 DDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKF-ETEL-RNFVAEKKIQDHVHFVN 345 (474)
Q Consensus 268 ~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~-~~~l-~~~~~~~~l~~~v~~~g 345 (474)
++..+++..|.-.+.|.+.. +-+.+|.+.+.+ ...+++++|+.. . ..+. ....+... .+.+.+.|
T Consensus 104 ~~~~i~i~~~a~~~~k~wp~--e~~~~l~~~l~~-----~~~~vvl~g~~~-----~~~~~~~~~~~~~~~-~~~~~~~~ 170 (247)
T PF01075_consen 104 DKPYIGINPGASWPSKRWPA--EKWAELIERLKE-----RGYRVVLLGGPE-----EQEKEIADQIAAGLQ-NPVINLAG 170 (247)
T ss_dssp TSSEEEEE---SSGGGS--H--HHHHHHHHHHCC-----CT-EEEE--SSH-----HHHHHHHHHHHTTHT-TTTEEETT
T ss_pred cCCeEEEeecCCCccccCCH--HHHHHHHHHHHh-----hCceEEEEccch-----HHHHHHHHHHHHhcc-cceEeecC
Confidence 55677777887677776654 444555454433 337888999863 2 2233 23333222 12577777
Q ss_pred CC--CChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEc
Q 011954 346 KT--LTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGT 388 (474)
Q Consensus 346 ~~--~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s 388 (474)
.. .++..+++.||++|-+-. | .+==|.|.|+|+|+-
T Consensus 171 ~~~l~e~~ali~~a~~~I~~Dt------g-~~HlA~a~~~p~v~l 208 (247)
T PF01075_consen 171 KTSLRELAALISRADLVIGNDT------G-PMHLAAALGTPTVAL 208 (247)
T ss_dssp TS-HHHHHHHHHTSSEEEEESS------H-HHHHHHHTT--EEEE
T ss_pred CCCHHHHHHHHhcCCEEEecCC------h-HHHHHHHHhCCEEEE
Confidence 53 778899999999997653 2 334488999999986
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A. |
| >PLN02208 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=95.16 E-value=0.52 Score=46.68 Aligned_cols=96 Identities=8% Similarity=-0.049 Sum_probs=59.6
Q ss_pred CeEEEecCCCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCC----cceeeee-CCceeeecCCC---
Q 011954 339 DHVHFVNKTLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGG----TMEIVVN-GTTGLLHPTGK--- 410 (474)
Q Consensus 339 ~~v~~~g~~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g----~~e~v~~-~~~G~l~~~~d--- 410 (474)
.++.+.++..+ .++++...+-++-++ +.-++++||+++|+|+|+-..-+ ....+.+ -..|+.+...+
T Consensus 311 ~g~~v~~W~PQ-~~iL~H~~v~~FvtH----cG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~~~~ 385 (442)
T PLN02208 311 RGVVWGGWVQQ-PLILDHPSIGCFVNH----CGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREKTGW 385 (442)
T ss_pred CCcEeeccCCH-HHHhcCCccCeEEcc----CCchHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEeccccCCc
Confidence 45667777544 346766766444443 33469999999999999875432 2222222 34565554321
Q ss_pred CChHHHHHHHHHHhhCH-HHHHHHHHHHHH
Q 011954 411 EGVTPLANNIVKLATHV-ERRLTMGKKGYE 439 (474)
Q Consensus 411 ~~~~~la~~i~~ll~~~-~~~~~~~~~~~~ 439 (474)
-+.++++++|.++++++ +..+++++++++
T Consensus 386 ~~~~~l~~ai~~~m~~~~e~g~~~r~~~~~ 415 (442)
T PLN02208 386 FSKESLSNAIKSVMDKDSDLGKLVRSNHTK 415 (442)
T ss_pred CcHHHHHHHHHHHhcCCchhHHHHHHHHHH
Confidence 12799999999999764 445555555554
|
|
| >PLN02764 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=95.02 E-value=0.7 Score=45.78 Aligned_cols=93 Identities=13% Similarity=0.009 Sum_probs=56.2
Q ss_pred eEEEecCCCChHHHHhcCCE--EEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCC----cceeee-eCCceeeecCC---
Q 011954 340 HVHFVNKTLTVSPYLASIDV--LVQNSQARGECFGRITIEAMAFQLPVLGTAAGG----TMEIVV-NGTTGLLHPTG--- 409 (474)
Q Consensus 340 ~v~~~g~~~~~~~~~~~adv--~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g----~~e~v~-~~~~G~l~~~~--- 409 (474)
.+.+.++..+ .++++...+ || + -+.-++++||+.+|+|+|+-...+ ....+. .-..|+-+...
T Consensus 318 G~v~~~W~PQ-~~vL~h~~v~~Fv--t----H~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~~~ 390 (453)
T PLN02764 318 GVVWGGWVQQ-PLILSHPSVGCFV--S----HCGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREETG 390 (453)
T ss_pred CcEEeCCCCH-HHHhcCcccCeEE--e----cCCchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEeccccCC
Confidence 3555566533 346665444 66 3 344569999999999999986542 222332 22345544221
Q ss_pred CCChHHHHHHHHHHhhCH-HHHHHHHHHHHH
Q 011954 410 KEGVTPLANNIVKLATHV-ERRLTMGKKGYE 439 (474)
Q Consensus 410 d~~~~~la~~i~~ll~~~-~~~~~~~~~~~~ 439 (474)
+.+.+++.+++.+++++. +..+++.+++++
T Consensus 391 ~~~~e~i~~av~~vm~~~~~~g~~~r~~a~~ 421 (453)
T PLN02764 391 WFSKESLRDAINSVMKRDSEIGNLVKKNHTK 421 (453)
T ss_pred ccCHHHHHHHHHHHhcCCchhHHHHHHHHHH
Confidence 123899999999999864 445555555543
|
|
| >PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria | Back alignment and domain information |
|---|
Probab=95.00 E-value=0.15 Score=42.80 Aligned_cols=15 Identities=27% Similarity=0.359 Sum_probs=13.4
Q ss_pred CCeEEEeCCCCcccc
Q 011954 230 PETYVVHLGNSKDLM 244 (474)
Q Consensus 230 ~ki~vi~ngvd~~~~ 244 (474)
+|+.||+-|||++.+
T Consensus 156 ~kI~VihdGiDt~~~ 170 (171)
T PF12000_consen 156 SKISVIHDGIDTDRF 170 (171)
T ss_pred cCcEEeecccchhhc
Confidence 689999999999865
|
This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important. |
| >PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT | Back alignment and domain information |
|---|
Probab=95.00 E-value=0.23 Score=45.71 Aligned_cols=106 Identities=15% Similarity=0.156 Sum_probs=63.0
Q ss_pred CCCEEEEEecccccC-------cchHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCe
Q 011954 268 DDDLLFAIINSVSRG-------KGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDH 340 (474)
Q Consensus 268 ~~~~~i~~vgrl~~~-------Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~ 340 (474)
.++..|+++...... .....+++.+..+.+ ..|+.+++|==.......... ....+.....+
T Consensus 115 ~~~~~vlv~lQ~~~D~~i~~~~~~~~~~~~~l~~~~~-------~~p~~~lvvK~HP~~~~~~~~----~~~~~~~~~~~ 183 (269)
T PF05159_consen 115 KNKKYVLVPLQVENDSQIRYHSPSQADFLDMLESFAK-------ENPDAKLVVKPHPDERGGNKY----SYLEELPNLPN 183 (269)
T ss_pred CCCCEEEEEeeCCcCcchhccCCcHhHHHHHHHHHHH-------HCCCCEEEEEECchhhCCCCh----hHhhhhhcCCC
Confidence 344455556555443 244556666666554 347788766543210000011 22222211346
Q ss_pred EEEecCCCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCC
Q 011954 341 VHFVNKTLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAG 391 (474)
Q Consensus 341 v~~~g~~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~ 391 (474)
+.+....-++.+++..||.++.-+ +.+-+||+.+|+||++...+
T Consensus 184 ~~~~~~~~~~~~Ll~~s~~Vvtin-------StvGlEAll~gkpVi~~G~~ 227 (269)
T PF05159_consen 184 VVIIDDDVNLYELLEQSDAVVTIN-------STVGLEALLHGKPVIVFGRA 227 (269)
T ss_pred eEEECCCCCHHHHHHhCCEEEEEC-------CHHHHHHHHcCCceEEecCc
Confidence 667766679999999999988543 35899999999999997543
|
Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport |
| >PF04230 PS_pyruv_trans: Polysaccharide pyruvyl transferase; InterPro: IPR007345 Pyruvyl-transferases are involved in peptidoglycan-associated polymer biosynthesis | Back alignment and domain information |
|---|
Probab=94.93 E-value=1.5 Score=40.19 Aligned_cols=37 Identities=14% Similarity=0.233 Sum_probs=30.3
Q ss_pred CCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCC
Q 011954 347 TLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAA 390 (474)
Q Consensus 347 ~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~ 390 (474)
..++..+++.+|++|-... -..+=|+++|+|+|+-+.
T Consensus 248 ~~~~~~~~~~~~~~Is~Rl-------H~~I~a~~~g~P~i~i~y 284 (286)
T PF04230_consen 248 PDELLELISQADLVISMRL-------HGAILALSLGVPVIAISY 284 (286)
T ss_pred HHHHHHHHhcCCEEEecCC-------HHHHHHHHcCCCEEEEec
Confidence 4788899999999997765 256779999999998653
|
CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora [, ]. |
| >PLN02992 coniferyl-alcohol glucosyltransferase | Back alignment and domain information |
|---|
Probab=94.78 E-value=0.93 Score=45.34 Aligned_cols=84 Identities=10% Similarity=-0.039 Sum_probs=53.8
Q ss_pred CeEEEecCCCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCC----cceee-eeCCceeeecCC--CC
Q 011954 339 DHVHFVNKTLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGG----TMEIV-VNGTTGLLHPTG--KE 411 (474)
Q Consensus 339 ~~v~~~g~~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g----~~e~v-~~~~~G~l~~~~--d~ 411 (474)
.++.+.++..+ .+++....+-.+-+ -+.-++++||+.+|+|+|+-...+ ....+ +.-..|+-++.. .-
T Consensus 338 rg~vv~~W~PQ-~~iL~h~~vg~Fit----H~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~~~~ 412 (481)
T PLN02992 338 RGFVVPSWAPQ-AEILAHQAVGGFLT----HCGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSDDPKEVI 412 (481)
T ss_pred CCEEEeecCCH-HHHhCCcccCeeEe----cCchhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEecCCCCcc
Confidence 35777787643 45777777633333 334569999999999999986442 22233 233456555431 12
Q ss_pred ChHHHHHHHHHHhhCH
Q 011954 412 GVTPLANNIVKLATHV 427 (474)
Q Consensus 412 ~~~~la~~i~~ll~~~ 427 (474)
+.++++++|.+++.++
T Consensus 413 ~~~~l~~av~~vm~~~ 428 (481)
T PLN02992 413 SRSKIEALVRKVMVEE 428 (481)
T ss_pred cHHHHHHHHHHHhcCC
Confidence 3799999999999753
|
|
| >PLN02554 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=94.69 E-value=1.2 Score=44.93 Aligned_cols=87 Identities=15% Similarity=0.097 Sum_probs=53.0
Q ss_pred CeEEEecCCCChHHHH--hcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCC----cc-eeeeeCCceeeecC---
Q 011954 339 DHVHFVNKTLTVSPYL--ASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGG----TM-EIVVNGTTGLLHPT--- 408 (474)
Q Consensus 339 ~~v~~~g~~~~~~~~~--~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g----~~-e~v~~~~~G~l~~~--- 408 (474)
+++.+.++..+ .+++ ..+++|| .-+.-++++||+.+|+|+|+-...+ .. .+++.-..|+.++.
T Consensus 342 ~~g~v~~W~PQ-~~iL~H~~v~~Fv------tH~G~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~~~~ 414 (481)
T PLN02554 342 DIGKVIGWAPQ-VAVLAKPAIGGFV------THCGWNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRKYWR 414 (481)
T ss_pred cCceEEeeCCH-HHHhCCcccCccc------ccCccchHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEeecccc
Confidence 46666777533 4566 4455566 2334469999999999999875432 12 22333345555431
Q ss_pred --------CCCChHHHHHHHHHHhh-CHHHHHH
Q 011954 409 --------GKEGVTPLANNIVKLAT-HVERRLT 432 (474)
Q Consensus 409 --------~d~~~~~la~~i~~ll~-~~~~~~~ 432 (474)
+.-+.++++++|.+++. +++.+++
T Consensus 415 ~~~~~~~~~~~~~e~l~~av~~vm~~~~~~r~~ 447 (481)
T PLN02554 415 GDLLAGEMETVTAEEIERGIRCLMEQDSDVRKR 447 (481)
T ss_pred ccccccccCeEcHHHHHHHHHHHhcCCHHHHHH
Confidence 11127899999999996 5544433
|
|
| >PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins | Back alignment and domain information |
|---|
Probab=94.65 E-value=2 Score=40.34 Aligned_cols=121 Identities=17% Similarity=0.080 Sum_probs=69.8
Q ss_pred HHHHHhcCCCCCCEEEEEecccccCc--chHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHc
Q 011954 258 EHVRESLGVRDDDLLFAIINSVSRGK--GQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEK 335 (474)
Q Consensus 258 ~~~r~~~~~~~~~~~i~~vgrl~~~K--g~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~ 335 (474)
..+..++.-...+.+.+.+|.-+..- +.+...+.+.++.+..++ .+..+.|..+.-+. ++..+.|++..+
T Consensus 135 ~~~~~~~~~l~~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~-----~~~~~~vttSRRTp-~~~~~~L~~~~~-- 206 (311)
T PF06258_consen 135 AAWAPRLAALPRPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAA-----YGGSLLVTTSRRTP-PEAEAALRELLK-- 206 (311)
T ss_pred HhhhhhhccCCCCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHh-----CCCeEEEEcCCCCc-HHHHHHHHHhhc--
Confidence 44555555445566666777543322 333222333333332322 34788999885321 123444444443
Q ss_pred CCCCeEEEec-CC-CChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCC
Q 011954 336 KIQDHVHFVN-KT-LTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGG 392 (474)
Q Consensus 336 ~l~~~v~~~g-~~-~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g 392 (474)
-...+.+.. .. +-+..+|+.||.++.+.- + -.-+.||.+.|+||..-..++
T Consensus 207 -~~~~~~~~~~~~~nPy~~~La~ad~i~VT~D----S-vSMvsEA~~tG~pV~v~~l~~ 259 (311)
T PF06258_consen 207 -DNPGVYIWDGTGENPYLGFLAAADAIVVTED----S-VSMVSEAAATGKPVYVLPLPG 259 (311)
T ss_pred -CCCceEEecCCCCCcHHHHHHhCCEEEEcCc----c-HHHHHHHHHcCCCEEEecCCC
Confidence 234664444 32 447899999999998754 1 235779999999999887766
|
The function of this family is unknown. |
| >PLN00164 glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=93.92 E-value=2.9 Score=42.06 Aligned_cols=95 Identities=12% Similarity=-0.018 Sum_probs=56.4
Q ss_pred eEEEecCCCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCC----cceee-eeCCceeeecCC-----
Q 011954 340 HVHFVNKTLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGG----TMEIV-VNGTTGLLHPTG----- 409 (474)
Q Consensus 340 ~v~~~g~~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g----~~e~v-~~~~~G~l~~~~----- 409 (474)
.+.+.++..+ .+++...++-.+-++ +.-++++||+.+|+|+|+-..-+ ....+ +.-..|+-+...
T Consensus 340 g~~v~~w~PQ-~~iL~h~~vg~fvtH----~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~~~~~ 414 (480)
T PLN00164 340 GLVWPTWAPQ-KEILAHAAVGGFVTH----CGWNSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDRKRDN 414 (480)
T ss_pred CeEEeecCCH-HHHhcCcccCeEEee----cccchHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEeccccccCC
Confidence 3555676533 567777775443343 23459999999999999875332 22222 222456655311
Q ss_pred CCChHHHHHHHHHHhhCHH-HHHHHHHHHHH
Q 011954 410 KEGVTPLANNIVKLATHVE-RRLTMGKKGYE 439 (474)
Q Consensus 410 d~~~~~la~~i~~ll~~~~-~~~~~~~~~~~ 439 (474)
..+.++++++|.+++.+++ ..+.+.+++.+
T Consensus 415 ~~~~e~l~~av~~vm~~~~~~~~~~r~~a~~ 445 (480)
T PLN00164 415 FVEAAELERAVRSLMGGGEEEGRKAREKAAE 445 (480)
T ss_pred cCcHHHHHHHHHHHhcCCchhHHHHHHHHHH
Confidence 0127999999999997643 24444444444
|
|
| >PLN02207 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=93.75 E-value=1.2 Score=44.32 Aligned_cols=82 Identities=12% Similarity=0.026 Sum_probs=47.8
Q ss_pred CeEEEecCCCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCC----cceeeee-CCceeeec------
Q 011954 339 DHVHFVNKTLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGG----TMEIVVN-GTTGLLHP------ 407 (474)
Q Consensus 339 ~~v~~~g~~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g----~~e~v~~-~~~G~l~~------ 407 (474)
++..+.++..+ .++++...+-.+-++ +.-++++||+.+|+|+|+-...+ ....+.+ -+.|+-+.
T Consensus 332 ~~g~i~~W~PQ-~~IL~H~~vg~FvTH----~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~~~~~~ 406 (468)
T PLN02207 332 GRGMICGWSPQ-VEILAHKAVGGFVSH----CGWNSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKLDYRVH 406 (468)
T ss_pred CCeEEEEeCCH-HHHhcccccceeeec----CccccHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEEecccccc
Confidence 45666676533 345555555333332 33458999999999999876432 2222222 23454221
Q ss_pred CC-CCChHHHHHHHHHHhh
Q 011954 408 TG-KEGVTPLANNIVKLAT 425 (474)
Q Consensus 408 ~~-d~~~~~la~~i~~ll~ 425 (474)
.. ..+.+++.++|.+++.
T Consensus 407 ~~~~v~~e~i~~av~~vm~ 425 (468)
T PLN02207 407 SDEIVNANEIETAIRCVMN 425 (468)
T ss_pred cCCcccHHHHHHHHHHHHh
Confidence 00 1127899999999996
|
|
| >PLN02534 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=93.57 E-value=3.2 Score=41.70 Aligned_cols=82 Identities=12% Similarity=0.029 Sum_probs=49.5
Q ss_pred CeEEEecCCCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCc----ceeee-eCCceeeec------
Q 011954 339 DHVHFVNKTLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGT----MEIVV-NGTTGLLHP------ 407 (474)
Q Consensus 339 ~~v~~~g~~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~----~e~v~-~~~~G~l~~------ 407 (474)
.++.+.|+..+ .+++...++-.+-+ -+..++++||+++|+|+|+-...+- ...+. .-+.|+-+.
T Consensus 344 ~g~~v~~w~pq-~~iL~h~~v~~fvt----H~G~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~e~~~vGv~~~~~~~~~ 418 (491)
T PLN02534 344 RGLLIKGWAPQ-VLILSHPAIGGFLT----HCGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIGVRVGVEVPVR 418 (491)
T ss_pred CCeeccCCCCH-HHHhcCCccceEEe----cCccHHHHHHHHcCCCEEeccccccHHHHHHHHHHhhcceEEeccccccc
Confidence 46777787644 56788888733333 3455799999999999998764321 11111 111222110
Q ss_pred ----C--C-CCChHHHHHHHHHHhh
Q 011954 408 ----T--G-KEGVTPLANNIVKLAT 425 (474)
Q Consensus 408 ----~--~-d~~~~~la~~i~~ll~ 425 (474)
. + ..+.+++++++.+++.
T Consensus 419 ~~~~~~~~~~v~~eev~~~v~~~m~ 443 (491)
T PLN02534 419 WGDEERVGVLVKKDEVEKAVKTLMD 443 (491)
T ss_pred ccccccccCccCHHHHHHHHHHHhc
Confidence 0 0 0127899999999996
|
|
| >PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family | Back alignment and domain information |
|---|
Probab=93.24 E-value=0.3 Score=42.31 Aligned_cols=40 Identities=20% Similarity=0.176 Sum_probs=30.0
Q ss_pred CEEEEEecCCCCCChhHHHHHHHHHHHhcCcEEEEEeCCCCCC
Q 011954 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWITNQKPNE 117 (474)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~ 117 (474)
||||+.+.+... ..-+..|.++|++.||+|.|+++.....
T Consensus 1 M~ILlTNDDGi~---a~Gi~aL~~~L~~~g~~V~VvAP~~~~S 40 (196)
T PF01975_consen 1 MRILLTNDDGID---APGIRALAKALSALGHDVVVVAPDSEQS 40 (196)
T ss_dssp SEEEEE-SS-TT---SHHHHHHHHHHTTTSSEEEEEEESSSTT
T ss_pred CeEEEEcCCCCC---CHHHHHHHHHHHhcCCeEEEEeCCCCCc
Confidence 789998875332 2568999999988899999999765543
|
This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A .... |
| >PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=93.02 E-value=0.44 Score=36.05 Aligned_cols=79 Identities=9% Similarity=0.187 Sum_probs=52.7
Q ss_pred EEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEec----CC-C--ChHHHHhcCCEEEEcCCC-CCCCCchHHHHHHhcC
Q 011954 311 AVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVN----KT-L--TVSPYLASIDVLVQNSQA-RGECFGRITIEAMAFQ 382 (474)
Q Consensus 311 l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g----~~-~--~~~~~~~~adv~v~ps~~-~~E~~~~~~~EAma~G 382 (474)
++|+|+-. .....+++.++++|. ...++| .. . .++..+..+|++|++... .....-.+--+|-..|
T Consensus 2 vliVGG~~----~~~~~~~~~~~~~G~--~~~~hg~~~~~~~~~~~l~~~i~~aD~VIv~t~~vsH~~~~~vk~~akk~~ 75 (97)
T PF10087_consen 2 VLIVGGRE----DRERRYKRILEKYGG--KLIHHGRDGGDEKKASRLPSKIKKADLVIVFTDYVSHNAMWKVKKAAKKYG 75 (97)
T ss_pred EEEEcCCc----ccHHHHHHHHHHcCC--EEEEEecCCCCccchhHHHHhcCCCCEEEEEeCCcChHHHHHHHHHHHHcC
Confidence 56788722 278899999999986 344443 22 3 388889999999987652 0112223344778889
Q ss_pred CCEEEcCCCCcce
Q 011954 383 LPVLGTAAGGTME 395 (474)
Q Consensus 383 ~PvI~s~~~g~~e 395 (474)
+|++.++..|...
T Consensus 76 ip~~~~~~~~~~~ 88 (97)
T PF10087_consen 76 IPIIYSRSRGVSS 88 (97)
T ss_pred CcEEEECCCCHHH
Confidence 9999998666544
|
|
| >TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative | Back alignment and domain information |
|---|
Probab=92.36 E-value=2.6 Score=40.32 Aligned_cols=104 Identities=9% Similarity=0.023 Sum_probs=61.4
Q ss_pred CCCEEEEEecccccCcchHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCC
Q 011954 268 DDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKT 347 (474)
Q Consensus 268 ~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~ 347 (474)
++.++++..|.-.+.|... .+-+.++.+.+.+ .+.+++++|+..+. ..+..++..+..+-...+.+.|..
T Consensus 180 ~~~~i~i~p~a~~~~K~Wp--~e~~~~l~~~l~~-----~~~~ivl~g~p~~~---e~~~~~~i~~~~~~~~~~~l~g~~ 249 (344)
T TIGR02201 180 GQNYIVIQPTSRWFFKCWD--NDRFSALIDALHA-----RGYEVVLTSGPDKD---ELAMVNEIAQGCQTPRVTSLAGKL 249 (344)
T ss_pred CCCEEEEeCCCCccccCCC--HHHHHHHHHHHHh-----CCCeEEEecCCCHH---HHHHHHHHHhhCCCCcccccCCCC
Confidence 3456666777655667554 2333344333322 35788888864210 122234444433322234566753
Q ss_pred --CChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEc
Q 011954 348 --LTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGT 388 (474)
Q Consensus 348 --~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s 388 (474)
.++..+++.||++|-+-. | .+==|.|.|+|+|+-
T Consensus 250 sL~el~ali~~a~l~Vs~DS------G-p~HlAaA~g~p~v~L 285 (344)
T TIGR02201 250 TLPQLAALIDHARLFIGVDS------V-PMHMAAALGTPLVAL 285 (344)
T ss_pred CHHHHHHHHHhCCEEEecCC------H-HHHHHHHcCCCEEEE
Confidence 789999999999996543 2 334488999999975
|
This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II. |
| >KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion] | Back alignment and domain information |
|---|
Probab=92.30 E-value=3.5 Score=41.77 Aligned_cols=94 Identities=15% Similarity=0.138 Sum_probs=54.7
Q ss_pred CeEEEecCCCChHHHHhc--CCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCC-C---Cc-ceeeeeCCceeeecCCCC
Q 011954 339 DHVHFVNKTLTVSPYLAS--IDVLVQNSQARGECFGRITIEAMAFQLPVLGTAA-G---GT-MEIVVNGTTGLLHPTGKE 411 (474)
Q Consensus 339 ~~v~~~g~~~~~~~~~~~--adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~-~---g~-~e~v~~~~~G~l~~~~d~ 411 (474)
.+|.+.++..+..-++.. ..+|| + .-|++ +++||+.+|+|+|+... + -. .-+.+.+..+++...+-.
T Consensus 335 ~nV~~~~W~PQ~~lll~H~~v~~Fv--T---HgG~n-St~E~~~~GvP~v~~Plf~DQ~~Na~~i~~~g~~~v~~~~~~~ 408 (496)
T KOG1192|consen 335 GNVVLSKWAPQNDLLLDHPAVGGFV--T---HGGWN-STLESIYSGVPMVCVPLFGDQPLNARLLVRHGGGGVLDKRDLV 408 (496)
T ss_pred CceEEecCCCcHHHhcCCCcCcEEE--E---CCccc-HHHHHHhcCCceecCCccccchhHHHHHHhCCCEEEEehhhcC
Confidence 478888876555433322 33444 3 23444 55999999999996532 2 22 333344444444433222
Q ss_pred ChHHHHHHHHHHhhCHHHHHHHHHHHHH
Q 011954 412 GVTPLANNIVKLATHVERRLTMGKKGYE 439 (474)
Q Consensus 412 ~~~~la~~i~~ll~~~~~~~~~~~~~~~ 439 (474)
...+.+++..++++++..+...+-+..
T Consensus 409 -~~~~~~~~~~il~~~~y~~~~~~l~~~ 435 (496)
T KOG1192|consen 409 -SEELLEAIKEILENEEYKEAAKRLSEI 435 (496)
T ss_pred -cHHHHHHHHHHHcChHHHHHHHHHHHH
Confidence 234888999998887766655444443
|
|
| >KOG3349 consensus Predicted glycosyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=90.98 E-value=4.3 Score=32.98 Aligned_cols=99 Identities=12% Similarity=0.169 Sum_probs=59.1
Q ss_pred CEEEEEecccccCcchHHHHHHH--HHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEec--
Q 011954 270 DLLFAIINSVSRGKGQDLFLHSF--YESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVN-- 345 (474)
Q Consensus 270 ~~~i~~vgrl~~~Kg~~~ll~a~--~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g-- 345 (474)
..+++.+|.-. +|.|+.+. .+..+.+++.| -+--++=+|.|..- ..+......+. ..+.+.|
T Consensus 4 ~~vFVTVGtT~----Fd~LI~~Vl~~~~~~~L~k~G---~~kLiiQ~Grg~~~---~~d~~~~~~k~----~gl~id~y~ 69 (170)
T KOG3349|consen 4 MTVFVTVGTTS----FDDLISCVLSEEFLQELQKRG---FTKLIIQIGRGQPF---FGDPIDLIRKN----GGLTIDGYD 69 (170)
T ss_pred eEEEEEecccc----HHHHHHHHcCHHHHHHHHHcC---ccEEEEEecCCccC---CCCHHHhhccc----CCeEEEEEe
Confidence 34677788532 77787765 33445555432 33333446766211 11222222222 2344444
Q ss_pred CCCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEc
Q 011954 346 KTLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGT 388 (474)
Q Consensus 346 ~~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s 388 (474)
+...+.++++.||+++. -+..-+++|-+..|+|.|+-
T Consensus 70 f~psl~e~I~~AdlVIs------HAGaGS~letL~l~KPlivV 106 (170)
T KOG3349|consen 70 FSPSLTEDIRSADLVIS------HAGAGSCLETLRLGKPLIVV 106 (170)
T ss_pred cCccHHHHHhhccEEEe------cCCcchHHHHHHcCCCEEEE
Confidence 56899999999999993 33345899999999998764
|
|
| >PRK09739 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=90.40 E-value=1.4 Score=38.47 Aligned_cols=42 Identities=14% Similarity=-0.016 Sum_probs=32.8
Q ss_pred cccCEEEEEecCCCCCCh-hHHHHHHHHHHHhcCcEEEEEeCC
Q 011954 72 MKSKLVLLVSHELSLSGG-PLLLMELAFLLRGVGAEVVWITNQ 113 (474)
Q Consensus 72 ~~~~kIl~v~~~~~~gG~-~~~~~~l~~~L~~~G~~V~v~~~~ 113 (474)
|.|||||+|......+|. ...+..+.+.+.+.|++|.++-..
T Consensus 1 ~~mmkiliI~~sp~~~s~s~~l~~~~~~~~~~~g~~v~~~dL~ 43 (199)
T PRK09739 1 MQSMRIYLVWAHPRHDSLTAKVAEAIHQRAQERGHQVEELDLY 43 (199)
T ss_pred CCCceEEEEEcCCCCCCcHHHHHHHHHHHHHHCCCEEEEEEhh
Confidence 568899999877666554 366778888999999999988743
|
|
| >PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [] | Back alignment and domain information |
|---|
Probab=90.39 E-value=0.91 Score=38.40 Aligned_cols=88 Identities=13% Similarity=0.042 Sum_probs=50.7
Q ss_pred cHHHHhhhcCCCEEEEcccchhhH-HhHHhhhcccccccceeeeeeccccccchhhhhhcccccccccccccccHHHHHH
Q 011954 141 GEKAINTALNADLVVLNTAVAGKW-LDGVLKDKVSQVLPKVLWWIHEMRGHYFKLEYVKHLPFVAGAMIDSYTTAEYWKN 219 (474)
Q Consensus 141 ~~~~~~~~~~~DiV~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 219 (474)
.+..+++..+||+|+|..+.+... +..+...... ...|++..+-++.. ....| .-+..|..++.+..+.+.+.
T Consensus 80 ~l~~~l~~~~PD~IIsThp~~~~~~l~~lk~~~~~-~~~p~~tvvTD~~~--~H~~W--~~~~~D~y~Vase~~~~~l~- 153 (169)
T PF06925_consen 80 RLIRLLREFQPDLIISTHPFPAQVPLSRLKRRGRL-PNIPVVTVVTDFDT--VHPFW--IHPGVDRYFVASEEVKEELI- 153 (169)
T ss_pred HHHHHHhhcCCCEEEECCcchhhhHHHHHHHhhcc-cCCcEEEEEcCCCC--CCcCe--ecCCCCEEEECCHHHHHHHH-
Confidence 345666679999999999887766 5544443321 12355444443311 01111 12456666666666555444
Q ss_pred hHHHHhcCCCCCeEEEeCC
Q 011954 220 RTRERLGIRMPETYVVHLG 238 (474)
Q Consensus 220 ~~~~~~~~~~~ki~vi~ng 238 (474)
..|++++++.+..-+
T Consensus 154 ----~~Gi~~~~I~vtGiP 168 (169)
T PF06925_consen 154 ----ERGIPPERIHVTGIP 168 (169)
T ss_pred ----HcCCChhHEEEeCcc
Confidence 369999998886543
|
; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process |
| >COG0496 SurE Predicted acid phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=88.96 E-value=1.1 Score=40.11 Aligned_cols=40 Identities=23% Similarity=0.207 Sum_probs=29.6
Q ss_pred CEEEEEecCCCCCChhHHHHHHHHHHHhcCcEEEEEeCCCCCCc
Q 011954 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWITNQKPNEP 118 (474)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~ 118 (474)
||||+.+.+.-. ..-+..|+++|+ .++||+|+++......
T Consensus 1 mrILlTNDDGi~---a~Gi~aL~~al~-~~~dV~VVAP~~~qSg 40 (252)
T COG0496 1 MRILLTNDDGIH---APGIRALARALR-EGADVTVVAPDREQSG 40 (252)
T ss_pred CeEEEecCCccC---CHHHHHHHHHHh-hCCCEEEEccCCCCcc
Confidence 789988875322 134888899998 8899999998765543
|
|
| >KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures] | Back alignment and domain information |
|---|
Probab=88.84 E-value=4.5 Score=40.48 Aligned_cols=95 Identities=15% Similarity=0.084 Sum_probs=65.2
Q ss_pred CChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCC-CEEEcCC--CCcceeeeeCCceeeecCCCCChHHHHHHHHHHh
Q 011954 348 LTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQL-PVLGTAA--GGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLA 424 (474)
Q Consensus 348 ~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~-PvI~s~~--~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll 424 (474)
....+.++.|..++.|.- .+...-.+.||+..|| |||.++. ....+++.-.+.+++++..+ +..+ |.+.|
T Consensus 335 ~~y~~~m~~S~FCL~p~G--d~~ts~R~fdai~~gCvPViisd~~~lpf~~~~d~~~fSV~v~~~~--v~~~---~~~iL 407 (464)
T KOG1021|consen 335 LNYMEGMQDSKFCLCPPG--DTPTSPRLFDAIVSGCVPVIISDGIQLPFGDVLDWTEFSVFVPEKD--VPEL---IKNIL 407 (464)
T ss_pred chHHHHhhcCeEEECCCC--CCcccHhHHHHHHhCCccEEEcCCcccCcCCCccceEEEEEEEHHH--hhhH---HHHHH
Confidence 567888999999999987 6777779999999997 9999884 23455554456777777433 4555 33333
Q ss_pred h--CHHHHHHHHHHHHHHHHHhcCHHH
Q 011954 425 T--HVERRLTMGKKGYERVKDRFLEHH 449 (474)
Q Consensus 425 ~--~~~~~~~~~~~~~~~~~~~fs~~~ 449 (474)
. ..+....|.++....+.+.|-+..
T Consensus 408 ~~i~~~~~~~m~~~v~~~v~r~~~~~~ 434 (464)
T KOG1021|consen 408 LSIPEEEVLRMRENVIRLVPRHFLKKP 434 (464)
T ss_pred HhcCHHHHHHHHHHHHHHHHhhEEeCC
Confidence 3 344556676666655666665554
|
|
| >PLN03015 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=88.56 E-value=12 Score=37.43 Aligned_cols=80 Identities=10% Similarity=0.042 Sum_probs=45.8
Q ss_pred EEEecCCCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCC----cceee-eeCCceeeec----CCCC
Q 011954 341 VHFVNKTLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGG----TMEIV-VNGTTGLLHP----TGKE 411 (474)
Q Consensus 341 v~~~g~~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g----~~e~v-~~~~~G~l~~----~~d~ 411 (474)
+.+.++..+ .+++....+-.+-++ +.-++++||+.+|+|+|+-...+ ....+ +.-..|+-+. .+..
T Consensus 337 l~v~~W~PQ-~~vL~h~~vg~fvtH----~GwnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~~~~~~~~~~~v 411 (470)
T PLN03015 337 LVVTQWAPQ-VEILSHRSIGGFLSH----CGWSSVLESLTKGVPIVAWPLYAEQWMNATLLTEEIGVAVRTSELPSEKVI 411 (470)
T ss_pred eEEEecCCH-HHHhccCccCeEEec----CCchhHHHHHHcCCCEEecccccchHHHHHHHHHHhCeeEEecccccCCcc
Confidence 455676533 345555555333332 33458999999999999875432 11111 1223343332 0111
Q ss_pred ChHHHHHHHHHHhh
Q 011954 412 GVTPLANNIVKLAT 425 (474)
Q Consensus 412 ~~~~la~~i~~ll~ 425 (474)
..++++++|.+++.
T Consensus 412 ~~e~i~~~v~~lm~ 425 (470)
T PLN03015 412 GREEVASLVRKIVA 425 (470)
T ss_pred CHHHHHHHHHHHHc
Confidence 27899999999995
|
|
| >COG1887 TagB Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=88.53 E-value=25 Score=34.19 Aligned_cols=180 Identities=12% Similarity=0.084 Sum_probs=96.8
Q ss_pred HHHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCc---c---hHHHHHHHHH
Q 011954 221 TRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGK---G---QDLFLHSFYE 294 (474)
Q Consensus 221 ~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~K---g---~~~ll~a~~~ 294 (474)
..+.+++...++....-+-+...+...... .........++++.++.+|+|.-.+.+.. | ....++. .+
T Consensus 163 f~~~f~~~~~~i~~~G~Pr~D~~~~~~~~~----~~~~~~~~~~~~~~~k~vIlyaPTfr~~~~~~~~~~~~~~~~~-~~ 237 (388)
T COG1887 163 FAEAFNIDKENILETGYPRNDKLFDEAGKT----EDILLIQLALPLPQDKKVILYAPTFRDNDVLIGTQFFNLDIDI-EK 237 (388)
T ss_pred HHHHhcccccceeecCcccchhhhhhccch----hhhHHHhhhcCCcccCceEEecCCccCCccccchhhhhhhhhH-HH
Confidence 455677777766665555443333322211 11223455667778889999987776654 2 2222222 22
Q ss_pred HHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCCCChHHHHhcCCEEEEcCCCCCCCCchH
Q 011954 295 SLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYLASIDVLVQNSQARGECFGRI 374 (474)
Q Consensus 295 l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv~v~ps~~~~E~~~~~ 374 (474)
+.+.+. ..++.+++-=.. ....-..... ...+.+..+....++.++|..+|++|. -++.+
T Consensus 238 ~~~~l~-----~~~~~ii~k~Hp------~is~~~~~~~--~~~~~~~~vs~~~di~dll~~sDiLIT-------DySSv 297 (388)
T COG1887 238 LKEKLG-----ENEYVIIVKPHP------LISDKIDKRY--ALDDFVLDVSDNADINDLLLVSDILIT-------DYSSV 297 (388)
T ss_pred HHHhhc-----cCCeEEEEecCh------hhhhhhhhhh--hccceeEecccchhHHHHHhhhCEEEe-------echHH
Confidence 222221 134555444332 1111111111 112334444456789999999999993 24669
Q ss_pred HHHHHhcCCCEEEcCCCCc-----ceeee---eCCceeeecCCCCChHHHHHHHHHHhhCHHH
Q 011954 375 TIEAMAFQLPVLGTAAGGT-----MEIVV---NGTTGLLHPTGKEGVTPLANNIVKLATHVER 429 (474)
Q Consensus 375 ~~EAma~G~PvI~s~~~g~-----~e~v~---~~~~G~l~~~~d~~~~~la~~i~~ll~~~~~ 429 (474)
..|+|...+|||..-.-+- +.... ...-|-++.. .+++.++|.....+.+.
T Consensus 298 ~fdf~~l~KPiify~~D~~~y~~~rg~~~d~~~~~Pg~~~~~----~~~li~ai~~~~~~~~~ 356 (388)
T COG1887 298 IFDFMLLDKPIIFYTYDLEQYDELRGFYLDYKFEAPGEVVET----QEELIDAIKPYDEDGNY 356 (388)
T ss_pred HHHHHHhcCcEEEEecChHHHHhhhhhhhhHHhcCCcccccc----HHHHHHHHHhhhcccch
Confidence 9999999999997632110 11111 1223444443 67888998888774443
|
|
| >PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2 | Back alignment and domain information |
|---|
Probab=87.56 E-value=14 Score=36.74 Aligned_cols=35 Identities=11% Similarity=0.041 Sum_probs=19.6
Q ss_pred cCCCEEEEcccchhhHHhHHhhhcccccccceeeeeecc
Q 011954 149 LNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEM 187 (474)
Q Consensus 149 ~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~ 187 (474)
.+||+||.|-+..+.....+... ...+...+.|..
T Consensus 400 ~~PdlI~GnYsDgnlvA~LLs~~----lgv~~~~iaHsL 434 (550)
T PF00862_consen 400 GKPDLIIGNYSDGNLVASLLSRK----LGVTQCFIAHSL 434 (550)
T ss_dssp S--SEEEEEHHHHHHHHHHHHHH----HT-EEEEE-SS-
T ss_pred CCCcEEEeccCcchHHHHHHHhh----cCCceehhhhcc
Confidence 78999999976666544443332 345677777864
|
4.1.13 from EC in the following reaction: |
| >TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase | Back alignment and domain information |
|---|
Probab=87.49 E-value=3.1 Score=42.08 Aligned_cols=37 Identities=19% Similarity=0.384 Sum_probs=28.0
Q ss_pred EEEEEecCCCCCCh-------hHHHHHHHHHHHhcC-cEEEEEeC
Q 011954 76 LVLLVSHELSLSGG-------PLLLMELAFLLRGVG-AEVVWITN 112 (474)
Q Consensus 76 kIl~v~~~~~~gG~-------~~~~~~l~~~L~~~G-~~V~v~~~ 112 (474)
||++|++....+|. +.-+..++..|.+.| |+|.++-.
T Consensus 1 ~illi~P~~~~~~~~~~~~~pPlgl~~lAa~L~~~G~~~V~iiD~ 45 (497)
T TIGR02026 1 RILILNPNYHAGGAEIAGQWPPLWVAYIGGALLDAGYHDVTFLDA 45 (497)
T ss_pred CeEEEcCCCCccccccCCCcCCHHHHHHHHHHHhcCCcceEEecc
Confidence 58899887665553 234678888899999 89999954
|
This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase. |
| >PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses [] | Back alignment and domain information |
|---|
Probab=87.32 E-value=0.51 Score=44.22 Aligned_cols=69 Identities=13% Similarity=0.066 Sum_probs=47.4
Q ss_pred CChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCC-CEEEcCCC--CcceeeeeCCceeeecCCCCChHHHHHHH
Q 011954 348 LTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQL-PVLGTAAG--GTMEIVVNGTTGLLHPTGKEGVTPLANNI 420 (474)
Q Consensus 348 ~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~-PvI~s~~~--g~~e~v~~~~~G~l~~~~d~~~~~la~~i 420 (474)
.+..+.|+.|..++.|.- ...+..-+.|||++|| |||.++.- ...|++.=....+.++..+ +.+|.+.|
T Consensus 228 ~~~~~~l~~S~FCL~p~G--~~~~s~Rl~eal~~GcIPVii~d~~~lPf~~~ldw~~fsv~v~~~~--~~~l~~iL 299 (302)
T PF03016_consen 228 SEYMELLRNSKFCLCPRG--DGPWSRRLYEALAAGCIPVIISDDYVLPFEDVLDWSRFSVRVPEAD--LPELPEIL 299 (302)
T ss_pred hHHHHhcccCeEEEECCC--CCcccchHHHHhhhceeeEEecCcccCCcccccCHHHEEEEECHHH--HHHHHHHH
Confidence 357788999999999874 3447889999999996 88887632 3356663345666676554 54444443
|
Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane |
| >PF08288 PIGA: PIGA (GPI anchor biosynthesis); InterPro: IPR013234 This domain is found on phosphatidylinositol N-acetylglucosaminyltransferase proteins | Back alignment and domain information |
|---|
Probab=84.80 E-value=1.6 Score=31.75 Aligned_cols=47 Identities=15% Similarity=0.070 Sum_probs=35.4
Q ss_pred hcHHHHhhhcCCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccc
Q 011954 140 KGEKAINTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMR 188 (474)
Q Consensus 140 ~~~~~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~ 188 (474)
+.++.+...++.||||.|+..+......++.... .+.+.+++-|...
T Consensus 40 pl~R~IlirE~I~IVHgH~a~S~l~hE~i~hA~~--mGlktVfTDHSLf 86 (90)
T PF08288_consen 40 PLLRNILIRERIDIVHGHQAFSTLCHEAILHART--MGLKTVFTDHSLF 86 (90)
T ss_pred HHHHHHHHHcCeeEEEeehhhhHHHHHHHHHHHh--CCCcEEeeccccc
Confidence 3467777889999999999887776666665544 4568899988763
|
These proteins are involved in GPI anchor biosynthesis and are associated with the disease paroxysmal nocturnal haemoglobinuria [].; GO: 0006506 GPI anchor biosynthetic process |
| >PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ] | Back alignment and domain information |
|---|
Probab=83.01 E-value=3.8 Score=32.57 Aligned_cols=44 Identities=14% Similarity=0.131 Sum_probs=31.3
Q ss_pred CChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCc
Q 011954 348 LTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGT 393 (474)
Q Consensus 348 ~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~ 393 (474)
+++.+++..+|++|--|. .+..--.+-.++.+|+|+|..-+|..
T Consensus 59 ~~l~~~~~~~DVvIDfT~--p~~~~~~~~~~~~~g~~~ViGTTG~~ 102 (124)
T PF01113_consen 59 DDLEELLEEADVVIDFTN--PDAVYDNLEYALKHGVPLVIGTTGFS 102 (124)
T ss_dssp S-HHHHTTH-SEEEEES---HHHHHHHHHHHHHHT-EEEEE-SSSH
T ss_pred hhHHHhcccCCEEEEcCC--hHHhHHHHHHHHhCCCCEEEECCCCC
Confidence 678899999999998886 56655566678899999998776654
|
In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A .... |
| >cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E | Back alignment and domain information |
|---|
Probab=82.77 E-value=14 Score=32.54 Aligned_cols=86 Identities=13% Similarity=0.103 Sum_probs=55.7
Q ss_pred CcEEEEEEcCCCCcCchHHHHHHHHHHHc-CCCCeEEEecCCCChHHHHhcCCEEEEcCCC--------CCCCCchHHHH
Q 011954 307 PSMHAVVVGSDMNAQTKFETELRNFVAEK-KIQDHVHFVNKTLTVSPYLASIDVLVQNSQA--------RGECFGRITIE 377 (474)
Q Consensus 307 ~~~~l~i~G~g~~~~~~~~~~l~~~~~~~-~l~~~v~~~g~~~~~~~~~~~adv~v~ps~~--------~~E~~~~~~~E 377 (474)
.+.++.++...+....++...+++..+++ |....+...-..++..+.+..||++++|.-. ..-++.-.+-+
T Consensus 30 ~~~~i~~IptAs~~~~~~~~~~~~a~~~l~G~~~~~~~~~~~~~~~~~l~~ad~I~l~GG~~~~~~~~l~~~~l~~~l~~ 109 (212)
T cd03146 30 ARPKVLFVPTASGDRDEYTARFYAAFESLRGVEVSHLHLFDTEDPLDALLEADVIYVGGGNTFNLLAQWREHGLDAILKA 109 (212)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHHhhccCcEEEEEeccCcccHHHHHhcCCEEEECCchHHHHHHHHHHcCHHHHHHH
Confidence 46788888877654455667777777888 7633322222245778899999999998521 01122334446
Q ss_pred HHhcCCCEEEcCCCC
Q 011954 378 AMAFQLPVLGTAAGG 392 (474)
Q Consensus 378 Ama~G~PvI~s~~~g 392 (474)
+...|+|++.+..|.
T Consensus 110 ~~~~g~~i~G~SAGa 124 (212)
T cd03146 110 ALERGVVYIGWSAGS 124 (212)
T ss_pred HHHCCCEEEEECHhH
Confidence 677899999887663
|
Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption. |
| >PF03853 YjeF_N: YjeF-related protein N-terminus; InterPro: IPR004443 The YjeF N-terminal domains occur either as single proteins or fusions with other domains and are commonly associated with enzymes | Back alignment and domain information |
|---|
Probab=82.34 E-value=2 Score=36.29 Aligned_cols=80 Identities=16% Similarity=0.134 Sum_probs=43.3
Q ss_pred cCEEEEEecCCCCCChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhcccchhccceeeeehhcHHHHh-hhcCCC
Q 011954 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEHKMLDRGVQVLSAKGEKAIN-TALNAD 152 (474)
Q Consensus 74 ~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~D 152 (474)
..+|++++..-+.|| --..+++.|.+.|++|.++.........+......+.+...++.+.......... ....+|
T Consensus 25 ~~~v~il~G~GnNGg---Dgl~~AR~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d 101 (169)
T PF03853_consen 25 GPRVLILCGPGNNGG---DGLVAARHLANRGYNVTVYLVGPPEKLSEDAKQQLEILKKMGIKIIELDSDEDLSEALEPAD 101 (169)
T ss_dssp T-EEEEEE-SSHHHH---HHHHHHHHHHHTTCEEEEEEEESSSSTSHHHHHHHHHHHHTT-EEESSCCGSGGGHHGSCES
T ss_pred CCeEEEEECCCCChH---HHHHHHHHHHHCCCeEEEEEEeccccCCHHHHHHHHHHHhcCCcEeeccccchhhccccccc
Confidence 456988887544444 5677889999999999996643333333333323444455566555433222211 122566
Q ss_pred EEEE
Q 011954 153 LVVL 156 (474)
Q Consensus 153 iV~~ 156 (474)
+|+=
T Consensus 102 lIID 105 (169)
T PF03853_consen 102 LIID 105 (169)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6653
|
In bacteria and archaea, YjeF N-terminal domains are often fused to a YjeF C-terminal domain with high structural homology to the members of a ribokinase-like superfamily (see PDOC00806 from PROSITEDOC)and/or belong to operons that encode enzymes of diverse functions: pyridoxal phosphate biosynthetic protein PdxJ; phosphopanteine-protein transferase; ATP/GTP hydrolase; and pyruvate-formate lyase 1-activating enzyme. In plants, the YjeF N-terminal domain is fused to a C-terminal putative pyridoxamine 5'-phosphate oxidase. In eukaryotes, proteins that consist of (Sm)-FDF-YjeF N-terminal domains may be involved in RNA processing [, ]. The YjeF N-terminal domains represent a novel version of the Rossmann fold, one of the most common protein folds in nature observed in numerous enzyme families, that has acquired a set of catalytic residues and structural features that distinguish them from the conventional dehydrogenases. The YjeF N-terminal domain is comprised of a three-layer alpha-beta-alpha sandwich with a central beta-sheet surrounded by helices. The conservation of the acidic residues in the predicted active site of the YjeF N-terminal domains is reminiscent of the presence of such residues in the active sites of diverse hydrolases [, ].; PDB: 3K5W_A 2O8N_A 2DG2_F 3RNO_A 1JZT_B 3D3K_A 3D3J_A 3RSG_A 3RT9_A 3RRF_A .... |
| >PRK13940 glutamyl-tRNA reductase; Provisional | Back alignment and domain information |
|---|
Probab=81.23 E-value=32 Score=33.85 Aligned_cols=72 Identities=4% Similarity=-0.039 Sum_probs=44.2
Q ss_pred EEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCCCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcC
Q 011954 310 HAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTA 389 (474)
Q Consensus 310 ~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~ 389 (474)
.+.|+... .+..+.++++++- .....+ +++...+..+|+++..+. .+-++.-. .+.-+.|.+.-|
T Consensus 207 ~I~V~nRt-------~~ra~~La~~~~~---~~~~~~-~~l~~~l~~aDiVI~aT~---a~~~vi~~-~~~~~~~~~~iD 271 (414)
T PRK13940 207 QIMLANRT-------IEKAQKITSAFRN---ASAHYL-SELPQLIKKADIIIAAVN---VLEYIVTC-KYVGDKPRVFID 271 (414)
T ss_pred EEEEECCC-------HHHHHHHHHHhcC---CeEecH-HHHHHHhccCCEEEECcC---CCCeeECH-HHhCCCCeEEEE
Confidence 67777764 2344666666541 112222 567888999999999875 23333333 344578998888
Q ss_pred CCCccee
Q 011954 390 AGGTMEI 396 (474)
Q Consensus 390 ~~g~~e~ 396 (474)
.+-.+++
T Consensus 272 LavPRdi 278 (414)
T PRK13940 272 ISIPQAL 278 (414)
T ss_pred eCCCCCC
Confidence 7655555
|
|
| >PRK06988 putative formyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=80.15 E-value=7.3 Score=36.65 Aligned_cols=78 Identities=13% Similarity=0.154 Sum_probs=44.0
Q ss_pred cCEEEEEecCCCCCChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchh-hhhhcccchhccceeeeehh-----cHHHHhh
Q 011954 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDE-VIYSLEHKMLDRGVQVLSAK-----GEKAINT 147 (474)
Q Consensus 74 ~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 147 (474)
||||+|+... .+.....+.|.+.|++|..+..+.+..... ....+.......+++++... ......+
T Consensus 2 ~mkIvf~Gs~-------~~a~~~L~~L~~~~~~i~~Vvt~~d~~~~~~~~~~v~~~A~~~gip~~~~~~~~~~~~~~~l~ 74 (312)
T PRK06988 2 KPRAVVFAYH-------NVGVRCLQVLLARGVDVALVVTHEDNPTENIWFGSVAAVAAEHGIPVITPADPNDPELRAAVA 74 (312)
T ss_pred CcEEEEEeCc-------HHHHHHHHHHHhCCCCEEEEEcCCCCCccCcCCCHHHHHHHHcCCcEEccccCCCHHHHHHHH
Confidence 5799998752 345555666777899977655443221111 11123334455566665421 2234456
Q ss_pred hcCCCEEEEcc
Q 011954 148 ALNADLVVLNT 158 (474)
Q Consensus 148 ~~~~DiV~~~~ 158 (474)
..+||++++-.
T Consensus 75 ~~~~Dliv~~~ 85 (312)
T PRK06988 75 AAAPDFIFSFY 85 (312)
T ss_pred hcCCCEEEEeh
Confidence 78999998753
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 474 | ||||
| 2jjm_A | 394 | Crystal Structure Of A Family Gt4 Glycosyltransfera | 4e-09 | ||
| 3mbo_A | 414 | Crystal Structure Of The Glycosyltransferase Babsha | 5e-09 | ||
| 2x6q_A | 416 | Crystal Structure Of Trehalose Synthase Tret From P | 6e-08 | ||
| 2xmp_A | 416 | Crystal Structure Of Trehalose Synthase Tret Mutant | 9e-08 | ||
| 2xa1_A | 416 | Crystal Structure Of Trehalose Synthase Tret From P | 4e-06 | ||
| 3s28_A | 816 | The Crystal Structure Of Sucrose Synthase-1 In Comp | 1e-05 | ||
| 3s27_A | 816 | The Crystal Structure Of Sucrose Synthase-1 From Ar | 7e-05 |
| >pdb|2JJM|A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. Length = 394 | Back alignment and structure |
|
| >pdb|3MBO|A Chain A, Crystal Structure Of The Glycosyltransferase Babsha Bound With Udp And L-Malate Length = 414 | Back alignment and structure |
|
| >pdb|2X6Q|A Chain A, Crystal Structure Of Trehalose Synthase Tret From P. Horikoshi Length = 416 | Back alignment and structure |
|
| >pdb|2XMP|A Chain A, Crystal Structure Of Trehalose Synthase Tret Mutant E326a From P.Horishiki In Complex With Udp Length = 416 | Back alignment and structure |
|
| >pdb|2XA1|A Chain A, Crystal Structure Of Trehalose Synthase Tret From P. Horikoshii (Seleno Derivative) Length = 416 | Back alignment and structure |
|
| >pdb|3S28|A Chain A, The Crystal Structure Of Sucrose Synthase-1 In Complex With A Breakdown Product Of The Udp-Glucose Length = 816 | Back alignment and structure |
|
| >pdb|3S27|A Chain A, The Crystal Structure Of Sucrose Synthase-1 From Arabidopsis Thaliana And Its Functional Implications. Length = 816 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Length = 416 | Back alignment and structure |
|---|
Score = 137 bits (347), Expect = 3e-36
Identities = 78/407 (19%), Positives = 142/407 (34%), Gaps = 45/407 (11%)
Query: 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEHKMLD 131
+K + + V+ G +L L LLR +G E W + P E V + + +
Sbjct: 38 LKGRSFVHVNSTSFGGGVAEILHSLVPLLRSIGIEARWFVIEGPTEFFNVTKTFHNALQG 97
Query: 132 RGVQVLSAKGEKAINTAL----------NADLVVLNTAVAGKWLDGVLKDKVSQVLPKVL 181
L+ + ++ + D V+++ L + K L
Sbjct: 98 NESLKLTEEMKELYLNVNRENSKFIDLSSFDYVLVHDPQPA-ALIEFYEKKS-----PWL 151
Query: 182 WWIHEMRGHYFKLEYVKHLPFVAGAMIDSYTTAEYWKNRT-RERLGIRMPETYVVHLGNS 240
W H + + FV + EY + R + ++ S
Sbjct: 152 WRCHIDLSSPNREFWEFLRRFVEKYDRYIFHLPEYVQPELDRNKA-------VIMP--PS 202
Query: 241 KDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIR 300
D + + ++ + E V + + ++ KG + + + ++
Sbjct: 203 IDPLSEKNVEL-KQTEILRILERFDVDPEKPIITQVSRFDPWKGIFDVIEIYRK----VK 257
Query: 301 EKKLQVPSMHAVVVGS----DMNAQTKFETELRNFVAEKKIQDHVHFVNK-TLTVSPYLA 355
EK +P + ++VG D FE LR + ++ + + V+ +
Sbjct: 258 EK---IPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAREVNAFQR 314
Query: 356 SIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTP 415
+ DV++Q S E FG EAM PV+G A GG +V+G TG L E
Sbjct: 315 ASDVILQMS--IREGFGLTVTEAMWKGKPVIGRAVGGIKFQIVDGETGFLVRDANE---- 368
Query: 416 LANNIVKLATHVERRLTMGKKGYERVKDRFLEHHMSQRIALVLREVL 462
++ L H E MG K ERV+ F+ +R +L +
Sbjct: 369 AVEVVLYLLKHPEVSKEMGAKAKERVRKNFIITKHMERYLDILNSLG 415
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Length = 394 | Back alignment and structure |
|---|
Score = 120 bits (303), Expect = 3e-30
Identities = 73/416 (17%), Positives = 159/416 (38%), Gaps = 48/416 (11%)
Query: 63 EKASNPLNFMKSKLVLLVSHEL-SLSGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEV 121
+ + + MK + + S+ G ++ EL L G E+ +IT+ P ++V
Sbjct: 5 GSSHHHHHHMK---LKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGLPFRLNKV 61
Query: 122 --------IYSLEHKMLDRGVQVLSA--KGEKAINTALNADLVVLNTAVAGKWLDGVLKD 171
+ ++ + L+ K + N D++ ++ A+ + K
Sbjct: 62 YPNIYFHEVTVNQYSVFQYPPYDLALASKMAEVAQR-ENLDILHVHYAIPHAICAYLAKQ 120
Query: 172 KVSQVLPKVL----WWIHEMRGHYFKLEYVKHLPFVAGAMIDSYTTAEYWKNRTRERLGI 227
+ + + V I + ++ + + + N T E +
Sbjct: 121 MIGERIKIVTTLHGTDITVLGSDPSLNNLIRFGIEQSDVVT---AVSHSLINETHELVKP 177
Query: 228 RMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDL 287
+ V+ +D + +++ G+ + + + I++ + K
Sbjct: 178 N-KDIQTVYNF-----IDERVY---FKRDMTQLKKEYGISESEKILIHISNFRKVKRVQD 228
Query: 288 FLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKT 347
+ +F + ++ E ++ ++VG + V I+D V F+ K
Sbjct: 229 VVQAFAK---IVTEVDAKL-----LLVGD-----GPEFCTILQLVKNLHIEDRVLFLGKQ 275
Query: 348 LTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHP 407
V+ LA D+++ S+ E FG + +EAMA +P +GT GG E++ +G TG L
Sbjct: 276 DNVAELLAMSDLMLLLSEK--ESFGLVLLEAMACGVPCIGTRVGGIPEVIQHGDTGYLCE 333
Query: 408 TGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRFLEHHMSQRIALVLREVLQ 463
G T +A+ ++L E MG++ E V ++F + + + +VL+
Sbjct: 334 VGD--TTGVADQAIQLLKDEELHRNMGERARESVYEQFRSEKIVSQYETIYYDVLR 387
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Length = 374 | Back alignment and structure |
|---|
Score = 117 bits (296), Expect = 2e-29
Identities = 69/401 (17%), Positives = 128/401 (31%), Gaps = 39/401 (9%)
Query: 72 MKSKLVLLVSHELSLSGGPLL---LMELAFLLRGVGAEVVWITNQ-KPNEPDEV-IYSLE 126
M V ++ GG L M +A + G V T + + P + +
Sbjct: 1 MI---VAFCLYKYFPFGG--LQRDFMRIASTVAARGHHVRVYTQSWEGDCPKAFELIQVP 55
Query: 127 HKMLDRGVQVLS-AKGEKAINTALNADLVVLNTAVAGKWL----DGVLKDKVSQVLPKVL 181
K + + AD VV + G + D +KV+Q +
Sbjct: 56 VKSHTNHGRNAEYYAWVQNHLKEHPADRVVGFNKMPGLDVYFAADVCYAEKVAQEKGFLY 115
Query: 182 WWIHEMRGHYFKLEYVKHLPFVAGAMIDSYTTAEYWKNRTRERLGIRMPETYVVHLGNSK 241
R HY E F G + ++ ++ G
Sbjct: 116 RLTSRYR-HYAAFE---RATFEQGKSTKLMMLTDKQIADFQKHYQTEPERFQILPPGIYP 171
Query: 242 DLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIRE 301
D + +R E R+ G+++ L + S KG D + E+L + E
Sbjct: 172 DRKYSEQIPNSR----EIYRQKNGIKEQQNLLLQVGSDFGRKGVDRSI----EALASLPE 223
Query: 302 KKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYLASIDVLV 361
+ + V + + + ++ +VHF + VS +A+ D+L+
Sbjct: 224 ---SLRHNTLLFVVGQDKPR-----KFEALAEKLGVRSNVHFFSGRNDVSELMAAADLLL 275
Query: 362 QNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIV 421
+ E G + +EA+ LPVL TA G + + G + L +
Sbjct: 276 HPA--YQEAAGIVLLEAITAGLPVLTTAVCGYAHYIADANCGTVIAEPFS-QEQLNEVLR 332
Query: 422 KLATHVERRLTMGKKGYERVKDRFLEHHMSQRIALVLREVL 462
K T R+ + D + + ++ A ++ L
Sbjct: 333 KALTQSPLRMAWAENARHYA-DTQDLYSLPEKAADIITGGL 372
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Length = 394 | Back alignment and structure |
|---|
Score = 105 bits (264), Expect = 5e-25
Identities = 59/272 (21%), Positives = 108/272 (39%), Gaps = 33/272 (12%)
Query: 212 TTAEYWKNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDL 271
++Y R + G P + G +D+ + A + R+ LG D
Sbjct: 146 YISQYTLRRFKSAFGSH-PTFEHLPSG-----VDVKRFTPATPEDKSATRKKLGFTDTTP 199
Query: 272 LFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNF 331
+ A + + KGQD + +++ + P ++VGS ++E+ LR
Sbjct: 200 VIACNSRLVPRKGQDSLI----KAMPQVIA---ARPDAQLLIVGSG-----RYESTLRRL 247
Query: 332 VAEKKIQDHVHFVNK--TLTVSPYLASIDVLVQNSQARG-----ECFGRITIEAMAFQLP 384
+ + +V F+ + + LA+ D+ ++ RG E G + +EA A +P
Sbjct: 248 ATD--VSQNVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQACGVP 305
Query: 385 VLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKDR 444
V+ +GG E V TGL+ V L+ +++L RR MG G V+
Sbjct: 306 VIAGTSGGAPETVTPA-TGLVVEGS--DVDKLSELLIELLDDPIRRAAMGAAGRAHVEAE 362
Query: 445 FLEHHMSQRIALVLREVLQ---YAKIHQPQSH 473
+ M +R+ +L+ + A H H
Sbjct: 363 WSWEIMGERLTNILQSEPRKLAAALEHHHHHH 394
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Length = 438 | Back alignment and structure |
|---|
Score = 98.1 bits (245), Expect = 3e-22
Identities = 47/258 (18%), Positives = 84/258 (32%), Gaps = 26/258 (10%)
Query: 222 RERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSR 281
VV G D+ S E R LG+ + A V R
Sbjct: 200 MHHYDADPDRISVVSPG-----ADVELYSPGNDRATERSRRELGIPLHTKVVA---FVGR 251
Query: 282 ---GKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQ 338
KG + + + ++ L+V ++ G + R+ E ++
Sbjct: 252 LQPFKGPQVLIKAVAALFDRDPDRNLRV-----IICGGPSGPNATPD-TYRHMAEELGVE 305
Query: 339 DHVHFVNKTLT---VSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTME 395
+ F+ + + D++ S E FG + +EA A PV+ GG
Sbjct: 306 KRIRFL-DPRPPSELVAVYRAADIVAVPS--FNESFGLVAMEAQASGTPVIAARVGGLPI 362
Query: 396 IVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRFLEHHMSQRIA 455
V G TGLL A+ + L E R+ MG+ E + F + +++
Sbjct: 363 AVAEGETGLLVDGHSPHA--WADALATLLDDDETRIRMGEDAVEHAR-TFSWAATAAQLS 419
Query: 456 LVLREVLQYAKIHQPQSH 473
+ + + + H
Sbjct: 420 SLYNDAIANENVDGETHH 437
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* Length = 816 | Back alignment and structure |
|---|
Score = 90.4 bits (224), Expect = 2e-19
Identities = 45/239 (18%), Positives = 86/239 (35%), Gaps = 25/239 (10%)
Query: 248 EDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVP 307
E+ + V + L + +LF + + R K + + ++ +L L
Sbjct: 551 EELLYSDVENKEHLCVLKDKKKPILFTM-ARLDRVKNLSGLVEWYGKNTRLRELANL--- 606
Query: 308 SMHAVVVG------SDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSP-------YL 354
VVVG S N + ++ + + E K+ +++ +
Sbjct: 607 ----VVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYIC 662
Query: 355 ASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLL--HPTGKEG 412
+ VQ + E FG +EAM LP T GG EI+V+G +G G +
Sbjct: 663 DTKGAFVQPA--LYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVHGKSGFHIDPYHGDQA 720
Query: 413 VTPLANNIVKLATHVERRLTMGKKGYERVKDRFLEHHMSQRIALVLREVLQYAKIHQPQ 471
LA+ K + K G +R+++++ SQR+ + + +
Sbjct: 721 ADTLADFFTKCKEDPSHWDEISKGGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLD 779
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} Length = 166 | Back alignment and structure |
|---|
Score = 84.1 bits (209), Expect = 2e-19
Identities = 25/171 (14%), Positives = 55/171 (32%), Gaps = 20/171 (11%)
Query: 283 KGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVH 342
K Q + + + L + K + ++ G E +++ + ++
Sbjct: 15 KNQSVLIKAV----ALSKYK----QDIVLLLKGKG-----PDEKKIKLLAQKLGVKAEFG 61
Query: 343 FVNKTLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQL-PVLGTAAGGTMEIVVNGT 401
FVN + L + + V + E +EA++ + PV+ +
Sbjct: 62 FVNSN-ELLEILKTCTLYVHAA--NVESEAIACLEAISVGIVPVIANSPLSATRQFALDE 118
Query: 402 TGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRFLEHHMSQ 452
L P L+ I + R M + + + LE+ + Q
Sbjct: 119 RSLFEP---NNAKDLSAKIDWWLENKLERERMQNEYAKSALNYTLENSVIQ 166
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* Length = 499 | Back alignment and structure |
|---|
Score = 84.4 bits (209), Expect = 1e-17
Identities = 43/252 (17%), Positives = 87/252 (34%), Gaps = 19/252 (7%)
Query: 234 VVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSR---GKGQDLFLH 290
V+ G + + D + + +++ LG +L I + SR K +
Sbjct: 225 VIPPGVNTRVFDGEYGDKIKAKITKYLERDLGSERMEL--PAIIASSRLDQKKNHYGLVE 282
Query: 291 SFYESLQLIREKKLQV----PSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHF--- 343
++ ++ +L + L + + + ++ + + V
Sbjct: 283 AYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSMFPL 342
Query: 344 VNKTLTVSPY---LASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNG 400
++ Y + V S E FG +EAMA LP + T GG EI+ G
Sbjct: 343 NSQQELAGCYAYLASKGSVFALTS--FYEPFGLAPVEAMASGLPAVVTRNGGPAEILDGG 400
Query: 401 TTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRFLEHHMSQRIALVLRE 460
G+L +A ++K E +KG +RV++R+ ++ V++E
Sbjct: 401 KYGVLVDPEDPED--IARGLLKAFESEETWSAYQEKGKQRVEERYTWQETARGYLEVIQE 458
Query: 461 VLQYAKIHQPQS 472
+
Sbjct: 459 IADRKDEEDEGG 470
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* Length = 406 | Back alignment and structure |
|---|
Score = 82.7 bits (205), Expect = 2e-17
Identities = 41/186 (22%), Positives = 70/186 (37%), Gaps = 29/186 (15%)
Query: 283 KGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGS-DMNAQTKFETELRNFVAEKKIQDHV 341
KG + L +L + + P + ++VG D E ELR + + H+
Sbjct: 222 KGMAVLL----AALPKLVA---RFPDVEILIVGRGD-------EDELREQAGD--LAGHL 265
Query: 342 HFVNKTLTVSP-----YLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEI 396
F+ + V + S DV GE FG + +EAMA V+ + +
Sbjct: 266 RFLGQ---VDDATKASAMRSADVYCAPHL-GGESFGIVLVEAMAAGTAVVASDLDAFRRV 321
Query: 397 VVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRFLEHHMSQRIAL 456
+ +G G L P +A ++ + + R + ERV R+ +S +I
Sbjct: 322 LADGDAGRLVPVD--DADGMAAALIGILEDDQLRAGYVARASERVH-RYDWSVVSAQIMR 378
Query: 457 VLREVL 462
V V
Sbjct: 379 VYETVS 384
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* Length = 413 | Back alignment and structure |
|---|
Score = 80.2 bits (197), Expect = 2e-16
Identities = 60/431 (13%), Positives = 128/431 (29%), Gaps = 60/431 (13%)
Query: 72 MKSKLVLLVSHELSLSGGP-----LLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLE 126
MK +++V S+ G ++ ++ EV+
Sbjct: 1 MK---LIIVGAHSSVPSGYGRVMRAIVPRIS-----KAHEVIVFGIHAFGRSVHANIEEF 52
Query: 127 HKMLDRGVQVLSAK--GEKAINTALNA---DLVVLNTA--VAGKWLDGVLKDKVSQVLPK 179
V+ L+ + ++ ++ D+V++ V G +L + K +
Sbjct: 53 DAQTAEHVRGLNEQGFYYSGLSEFIDVHKPDIVMIYNDPIVIGNYLLAMGKCSHRTKIVL 112
Query: 180 VL-WWIHEMRGHYFKLEYVKHLPFVAGAMIDSYTTAEYWKNRTRERLGIRMPETYVVHLG 238
+ +R + + + + G ++P V H
Sbjct: 113 YVDLVSKNIRENLWWIFSHPK--------VVGVMAMSKCWISDICNYGCKVPINIVSHFV 164
Query: 239 NSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQL 298
++K + D + L +DD+LF +N + K D+++ + +
Sbjct: 165 DTKTIYDARK------------LVGLSEYNDDVLFLNMNRNTARKRLDIYVLAAARFISK 212
Query: 299 IREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLT---VSPYLA 355
+ K++ D+++ E + + LT V
Sbjct: 213 YPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNKIMINRTVLTDERVDMMYN 272
Query: 356 SIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTP 415
+ DV+V S GE FG + E P++ +A GG + + P+ V
Sbjct: 273 ACDVIVNCS--SGEGFGLCSAEGAVLGKPLIISAVGGADDYFSGDCVYKIKPSAWISVDD 330
Query: 416 LAN--------------NIVKLATHVERRLTMGKKGYERVKDRFLEHHMSQRIALVLREV 461
+ R GK+ + VK + +S I +
Sbjct: 331 RDGIGGIEGIIDVDDLVEAFTFFKDEKNRKEYGKRVQDFVKTKPTWDDISSDIIDFFNSL 390
Query: 462 LQYAKIHQPQS 472
L+ P +
Sbjct: 391 LRVESRETPGN 401
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 Length = 177 | Back alignment and structure |
|---|
Score = 74.1 bits (183), Expect = 1e-15
Identities = 42/192 (21%), Positives = 74/192 (38%), Gaps = 37/192 (19%)
Query: 261 RESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVG--SDM 318
+ D L +N + K +L L F + ++++KL +VG S
Sbjct: 16 KFKFKCYGDFWLS--VNRIYPEKRIELQLEVFKK----LQDEKL-------YIVGWFSKG 62
Query: 319 NAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSP-----YLASIDVLVQNSQARGECFGR 373
+ ++ ++ K D+V F+ VS + L+ ++ E FG
Sbjct: 63 DHAERYARKIM-----KIAPDNVKFLGS---VSEEELIDLYSRCKGLLCTAKD--EDFGL 112
Query: 374 ITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTM 433
IEAMA PV+ GG E V+N TG L + + + K++ + ++
Sbjct: 113 TPIEAMASGKPVIAVNEGGFKETVINEKTGYLVNADVNE---IIDAMKKVSKNPDK---F 166
Query: 434 GKKGYERVKDRF 445
K + R K F
Sbjct: 167 KKDCFRRAK-EF 177
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Length = 413 | Back alignment and structure |
|---|
Score = 72.9 bits (178), Expect = 4e-14
Identities = 50/406 (12%), Positives = 108/406 (26%), Gaps = 66/406 (16%)
Query: 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEHKMLDRG-- 133
L++ ++ + GG ++L + I P ++ K +
Sbjct: 51 LLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTDATPNPKDLQSFKSFKYVMPEED 110
Query: 134 ----VQVLSAKGEKAINTAL-NADLVVLN---TAVAGKWLDGVLKDKVSQVLPKVLWWIH 185
+Q++ + D+ + TA A + + D K+L+ I
Sbjct: 111 KDFALQIVPFNDRYNRTIPVAKHDIFIATAWWTAYAAQRIVSWQSDTYGIPPNKILYIIQ 170
Query: 186 EMRGHYFKLE---------YVKHLPFVAGAMIDSYTTAEYWKNRTRERLGIRMPETYVVH 236
+ +++ Y P +A + G + Y
Sbjct: 171 DFEPGFYQWSSQYVLAESTYKYRGPQIA-------VFNSELLKQYFNNKGYNFTDEYFFQ 223
Query: 237 LGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESL 296
+ L ++ ++ +L SV R L + E+L
Sbjct: 224 PKINTTL--------------KNYINDKRQKEKIILVYGRPSVKR-NAFTLIV----EAL 264
Query: 297 QLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNK--TLTVSPYL 354
++ +K + + VG H++ + K + L
Sbjct: 265 KIFVQKYDRSNEWKIISVGEKHKD------------IALGKGIHLNSLGKLTLEDYADLL 312
Query: 355 ASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVT 414
+ + + +E F L V+ + L E
Sbjct: 313 KRSSIGISLMISPH--PSYPPLEMAHFGLRVITNKYENKDLSNWHSNIVSLEQLNPEN-- 368
Query: 415 PLANNIVKLATHVERRLTMGKKGYERVK--DRFLEHHMSQRIALVL 458
+A +V+L R K+ + + F E + I L
Sbjct: 369 -IAETLVELCMSFNNRDVDKKESSNMMFYINEFNEFSFIKEIEEKL 413
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 64.5 bits (156), Expect = 5e-11
Identities = 45/339 (13%), Positives = 102/339 (30%), Gaps = 81/339 (23%)
Query: 8 WITMQKKKRWQLMILVLFTLSTAMLFFIRSTANSCNTSSITTKTTTTATHFNSDEEKASN 67
W+ ++ + ++ +L L + N +S + ++ +S + +
Sbjct: 186 WLNLKNCNSPETVLEMLQKLLYQI---------DPNWTSRSDHSSNIKLRIHSIQAELRR 236
Query: 68 PLNFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEH 127
+KSK +E L L+L V + +
Sbjct: 237 ---LLKSK-----PYENCL----LVL-------------------------LNV-QNAKA 258
Query: 128 -KMLDRGVQVLSAKGEKAINTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHE 186
+ ++L K + L+A + + D+V +L K L +
Sbjct: 259 WNAFNLSCKILLTTRFKQVTDFLSAATTTHISLD--HHSMTLTPDEVKSLLLKYL----D 312
Query: 187 MRGHYFKLEYVKHLPFV---AGAMI-DSYTTAEYWKNRTRERLGIRMPETYVVHLGNSKD 242
R E + P I D T + WK+ ++L + E+ + L +
Sbjct: 313 CRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKL-TTIIESSLNVL-EPAE 370
Query: 243 LMDIAEDSVARRVLREHVRESLGV----------RDDDLLFAIINSVS----RGKGQDLF 288
+ + V + D ++ ++ S + K +
Sbjct: 371 YRKMFDRLS---VFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTIS 427
Query: 289 LHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETE 327
+ S Y ++ K ++H +V N F+++
Sbjct: 428 IPSIY---LELKVKLENEYALHRSIVDHY-NIPKTFDSD 462
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 56.8 bits (136), Expect = 1e-08
Identities = 67/475 (14%), Positives = 147/475 (30%), Gaps = 137/475 (28%)
Query: 96 LAFLLRGVGAEVV-------------WITNQ---KPNEP--DEVIYSLEHKMLDRGVQVL 137
L + L E+V ++ + + +P +Y + L QV
Sbjct: 67 LFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVF 126
Query: 138 S------AKGEKAINTAL-----NADLVVLNTAVAGK-WLDG-VLKD-KVSQVLPKVLWW 183
+ + + AL ++++ +GK W+ V KV + ++W
Sbjct: 127 AKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFW 186
Query: 184 IHEMRGHYFK----LEYVKHL------PFVAGA--MIDSYTTAEYWKNRTRERLGIRM-P 230
++ + LE ++ L + + + + + R L +
Sbjct: 187 LN--LKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYE 244
Query: 231 ETYVVHLGNSKDLMDIAEDSVAR------RVLREHVRESLGVRDDDLLFAIINSVSRGKG 284
+V L+++ ++L L R + + + +
Sbjct: 245 NCLLV-------LLNVQNAKAWNAFNLSCKIL-------LTTRFKQVTDFLSAATTTHIS 290
Query: 285 QDLFLHSFY--ESLQL------IREKKL--QVPSMHAVVVGSDMNAQTKFETELRNFVAE 334
D + E L R + L +V + + + +R+ +A
Sbjct: 291 LDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSI-------IAESIRDGLAT 343
Query: 335 KKIQDHVHFVNKTLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQ----LP--VLGT 388
HV+ T + +S++VL + ++ R + F R+++ F +P +L
Sbjct: 344 WDNWKHVNCDKLTTIIE---SSLNVL-EPAEYR-KMFDRLSV----FPPSAHIPTILLSL 394
Query: 389 ----AAGGTMEIVVNG--TTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKK---GYE 439
+ +VVN L+ KE + + ++L +E + + Y
Sbjct: 395 IWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYN 454
Query: 440 RVKDR----------------FLEHHM-----SQRIALVLREV------LQYAKI 467
K + HH+ +R+ L R V L+ KI
Sbjct: 455 IPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTL-FRMVFLDFRFLE-QKI 507
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* Length = 342 | Back alignment and structure |
|---|
Score = 48.2 bits (115), Expect = 3e-06
Identities = 24/134 (17%), Positives = 39/134 (29%), Gaps = 19/134 (14%)
Query: 339 DHVHFVNK--TLTVSPYLASIDVLVQNSQARG--------ECFGRITIEAMAFQLPVLGT 388
V + + LAS ++ SQA E + EA PV+GT
Sbjct: 212 STVEPIGEVGGERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGT 271
Query: 389 AAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRFLEH 448
G EIV + + + T A L + +
Sbjct: 272 GNGCLAEIVPSVGEVVGYGTD---------FAPDEARRTLAGLPASDEVRRAAVRLWGHV 322
Query: 449 HMSQRIALVLREVL 462
+++R R +L
Sbjct: 323 TIAERYVEQYRRLL 336
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 474 | |||
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 100.0 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 100.0 | |
| 3fro_A | 439 | GLGA glycogen synthase; glycosyltransferase family | 100.0 | |
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 100.0 | |
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 100.0 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 100.0 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 100.0 | |
| 1rzu_A | 485 | Glycogen synthase 1; glycosyl-transferase, GT-B fo | 100.0 | |
| 2qzs_A | 485 | Glycogen synthase; glycosyl-transferase, GT-B fold | 100.0 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 100.0 | |
| 3vue_A | 536 | GBSS-I, granule-bound starch synthase 1, chloropla | 100.0 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 100.0 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 100.0 | |
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 100.0 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 100.0 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 100.0 | |
| 1f0k_A | 364 | MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe | 100.0 | |
| 2hy7_A | 406 | Glucuronosyltransferase GUMK; glycosyltransferases | 100.0 | |
| 3nb0_A | 725 | Glycogen [starch] synthase isoform 2; glycogen syn | 99.98 | |
| 3beo_A | 375 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a | 99.98 | |
| 1vgv_A | 384 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.97 | |
| 1uqt_A | 482 | Alpha, alpha-trehalose-phosphate synthase; glycosy | 99.97 | |
| 2bfw_A | 200 | GLGA glycogen synthase; glycosyltransferase family | 99.97 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 99.96 | |
| 2xci_A | 374 | KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci | 99.96 | |
| 3t5t_A | 496 | Putative glycosyltransferase; GTB fold, pseudoglyc | 99.96 | |
| 1v4v_A | 376 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t | 99.95 | |
| 2f9f_A | 177 | First mannosyl transferase (WBAZ-1); alpha-beta pr | 99.94 | |
| 3dzc_A | 396 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.89 | |
| 3otg_A | 412 | CALG1; calicheamicin, TDP, structural genomics, PS | 99.88 | |
| 3s2u_A | 365 | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape | 99.88 | |
| 3ot5_A | 403 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.87 | |
| 3rhz_A | 339 | GTF3, nucleotide sugar synthetase-like protein; gl | 99.86 | |
| 2iyf_A | 430 | OLED, oleandomycin glycosyltransferase; antibiotic | 99.84 | |
| 4fzr_A | 398 | SSFS6; structural genomics, PSI-biology, protein s | 99.84 | |
| 3tsa_A | 391 | SPNG, NDP-rhamnosyltransferase; glycosyltransferas | 99.82 | |
| 3oti_A | 398 | CALG3; calicheamicin, TDP, structural genomics, PS | 99.81 | |
| 3ia7_A | 402 | CALG4; glycosysltransferase, calicheamicin, enediy | 99.8 | |
| 3rsc_A | 415 | CALG2; TDP, enediyne, structural genomics, PSI-2, | 99.76 | |
| 2p6p_A | 384 | Glycosyl transferase; X-RAY-diffraction,urdamycina | 99.7 | |
| 3q3e_A | 631 | HMW1C-like glycosyltransferase; N-glycosylation; 2 | 99.63 | |
| 4hwg_A | 385 | UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc | 99.63 | |
| 2yjn_A | 441 | ERYCIII, glycosyltransferase; transferase, cytochr | 99.61 | |
| 2iya_A | 424 | OLEI, oleandomycin glycosyltransferase; carbohydra | 99.53 | |
| 3h4t_A | 404 | Glycosyltransferase GTFA, glycosyltransferase; van | 99.5 | |
| 1l5w_A | 796 | Maltodextrin phosphorylase; enzymatic catalysis, s | 99.49 | |
| 2c4m_A | 796 | Glycogen phosphorylase; allosteric control, phosph | 99.46 | |
| 2gj4_A | 824 | Glycogen phosphorylase, muscle form; transferase; | 99.44 | |
| 4amg_A | 400 | Snogd; transferase, polyketide biosynthesis, GT1 f | 99.43 | |
| 1iir_A | 415 | Glycosyltransferase GTFB; rossmann fold; 1.80A {Am | 99.42 | |
| 2o6l_A | 170 | UDP-glucuronosyltransferase 2B7; drug metabolism, | 99.35 | |
| 1rrv_A | 416 | Glycosyltransferase GTFD; GT-B, glycosyltransferas | 99.33 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 99.32 | |
| 3hbm_A | 282 | UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter je | 98.6 | |
| 3l7i_A | 729 | Teichoic acid biosynthesis protein F; GT-B fold, m | 98.08 | |
| 1ygp_A | 879 | Yeast glycogen phosphorylase; phosphorylated form, | 98.06 | |
| 3tov_A | 349 | Glycosyl transferase family 9; structural genomics | 97.84 | |
| 2c1x_A | 456 | UDP-glucose flavonoid 3-O glycosyltransferase; WIN | 97.73 | |
| 2gt1_A | 326 | Lipopolysaccharide heptosyltransferase-1; GT-B fol | 97.6 | |
| 3hbf_A | 454 | Flavonoid 3-O-glucosyltransferase; glycosyltransfe | 97.53 | |
| 2pq6_A | 482 | UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl | 97.51 | |
| 1psw_A | 348 | ADP-heptose LPS heptosyltransferase II; structural | 97.28 | |
| 2jzc_A | 224 | UDP-N-acetylglucosamine transferase subunit ALG13; | 97.2 | |
| 2acv_A | 463 | Triterpene UDP-glucosyl transferase UGT71G1; glyco | 97.14 | |
| 2vch_A | 480 | Hydroquinone glucosyltransferase; glycosyltransfer | 97.05 | |
| 1xv5_A | 401 | AGT, DNA alpha-glucosyltransferase; HET: DNA CME U | 94.05 | |
| 4gi5_A | 280 | Quinone reductase; protein structure initiative, F | 89.86 | |
| 3kht_A | 144 | Response regulator; PSI-II, 11023K, structural gen | 88.66 | |
| 1k68_A | 140 | Phytochrome response regulator RCPA; phosphorylate | 88.4 | |
| 2phj_A | 251 | 5'-nucleotidase SURE; SURE protein, putative acid | 87.2 | |
| 2bw0_A | 329 | 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase | 87.14 | |
| 3heb_A | 152 | Response regulator receiver domain protein (CHEY); | 86.46 | |
| 3egc_A | 291 | Putative ribose operon repressor; structural genom | 85.78 | |
| 3jte_A | 143 | Response regulator receiver protein; structural ge | 85.74 | |
| 2zay_A | 147 | Response regulator receiver protein; structural ge | 85.04 | |
| 2wqk_A | 251 | 5'-nucleotidase SURE; SURE protein, putative acid | 84.81 | |
| 1qkk_A | 155 | DCTD, C4-dicarboxylate transport transcriptional r | 84.66 | |
| 2a5l_A | 200 | Trp repressor binding protein WRBA; APC5760, PA094 | 84.39 | |
| 3h5i_A | 140 | Response regulator/sensory box protein/ggdef domai | 84.38 | |
| 3ilh_A | 146 | Two component response regulator; NYSGXRC, PSI-II, | 84.01 | |
| 3grc_A | 140 | Sensor protein, kinase; protein structure initiati | 83.89 | |
| 1k66_A | 149 | Phytochrome response regulator RCPB; CHEY homologu | 83.72 | |
| 1i3c_A | 149 | Response regulator RCP1; phytochrome, signaling pr | 83.38 | |
| 3cg4_A | 142 | Response regulator receiver domain protein (CHEY-; | 83.06 | |
| 3h1g_A | 129 | Chemotaxis protein CHEY homolog; sulfate-bound CHE | 82.99 | |
| 2zki_A | 199 | 199AA long hypothetical Trp repressor binding prot | 82.48 | |
| 2pln_A | 137 | HP1043, response regulator; signaling protein; 1.8 | 82.35 | |
| 3q0i_A | 318 | Methionyl-tRNA formyltransferase; structural genom | 81.31 | |
| 2l2q_A | 109 | PTS system, cellobiose-specific IIB component (CE; | 81.15 | |
| 3h75_A | 350 | Periplasmic sugar-binding domain protein; protein | 80.96 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 80.92 | |
| 3gt7_A | 154 | Sensor protein; structural genomics, signal receiv | 80.85 | |
| 3eul_A | 152 | Possible nitrate/nitrite response transcriptional | 80.54 | |
| 2rdm_A | 132 | Response regulator receiver protein; structural ge | 80.26 | |
| 1l5x_A | 280 | SurviVal protein E; structural genomics, putative | 80.14 | |
| 4e7p_A | 150 | Response regulator; DNA binding, cytosol, transcri | 80.12 |
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-46 Score=372.73 Aligned_cols=370 Identities=17% Similarity=0.223 Sum_probs=275.8
Q ss_pred cccccccCEEEEEecCCCC---------CChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhcccchhccceeeee
Q 011954 68 PLNFMKSKLVLLVSHELSL---------SGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEHKMLDRGVQVLS 138 (474)
Q Consensus 68 ~~~~~~~~kIl~v~~~~~~---------gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (474)
+.....|||||+++..+.| ||+++++.+|+++|.+.||+|++++.......... .. ...++.++.
T Consensus 14 ~~~~~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~----~~--~~~~v~v~~ 87 (438)
T 3c48_A 14 LVPRGSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEI----VR--VAENLRVIN 87 (438)
T ss_dssp -----CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCSE----EE--EETTEEEEE
T ss_pred cccCcchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCccc----cc--ccCCeEEEE
Confidence 3344558899999987654 78899999999999999999999996543211000 00 011222111
Q ss_pred hh---------------------cHHHH-hhhc-CCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccccc---
Q 011954 139 AK---------------------GEKAI-NTAL-NADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYF--- 192 (474)
Q Consensus 139 ~~---------------------~~~~~-~~~~-~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~--- 192 (474)
.. ..... .+.. +||+||+|....+... ..+... ...|+++++|+......
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Div~~~~~~~~~~~-~~~~~~---~~~p~v~~~h~~~~~~~~~~ 163 (438)
T 3c48_A 88 IAAGPYEGLSKEELPTQLAAFTGGMLSFTRREKVTYDLIHSHYWLSGQVG-WLLRDL---WRIPLIHTAHTLAAVKNSYR 163 (438)
T ss_dssp ECCSCSSSCCGGGGGGGHHHHHHHHHHHHHHHTCCCSEEEEEHHHHHHHH-HHHHHH---HTCCEEEECSSCHHHHSCC-
T ss_pred ecCCCccccchhHHHHHHHHHHHHHHHHHHhccCCCCEEEeCCccHHHHH-HHHHHH---cCCCEEEEecCCcccccccc
Confidence 00 00111 2222 5999999975433222 212211 23588899998632110
Q ss_pred h------h-----hhhhcccccccccccccccHHHHHHhHHHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHH
Q 011954 193 K------L-----EYVKHLPFVAGAMIDSYTTAEYWKNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVR 261 (474)
Q Consensus 193 ~------~-----~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r 261 (474)
. . .....++.++.+++.+....+. +.+.+|++..++.|||||+|.+.|.+.... .+..++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~----~~~~~g~~~~k~~vi~ngvd~~~~~~~~~~-----~~~~~r 234 (438)
T 3c48_A 164 DDSDTPESEARRICEQQLVDNADVLAVNTQEEMQD----LMHHYDADPDRISVVSPGADVELYSPGNDR-----ATERSR 234 (438)
T ss_dssp ---CCHHHHHHHHHHHHHHHHCSEEEESSHHHHHH----HHHHHCCCGGGEEECCCCCCTTTSCCC---------CHHHH
T ss_pred cccCCcchHHHHHHHHHHHhcCCEEEEcCHHHHHH----HHHHhCCChhheEEecCCccccccCCcccc-----hhhhhH
Confidence 0 0 0112234556666666555444 444578888899999999999988765321 123478
Q ss_pred HhcCCCCCCEEEEEecccccCcchHHHHHHHHHHHHHHHHhccCCC--cEEEEEEcC----CCCcCchHHHHHHHHHHHc
Q 011954 262 ESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVP--SMHAVVVGS----DMNAQTKFETELRNFVAEK 335 (474)
Q Consensus 262 ~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~--~~~l~i~G~----g~~~~~~~~~~l~~~~~~~ 335 (474)
++++++.+.++|+++||+.+.||++.+++|+..+.+ ++| +++|+|+|+ |+ +.+.++++++++
T Consensus 235 ~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~-------~~p~~~~~l~i~G~~~~~g~-----~~~~l~~~~~~~ 302 (438)
T 3c48_A 235 RELGIPLHTKVVAFVGRLQPFKGPQVLIKAVAALFD-------RDPDRNLRVIICGGPSGPNA-----TPDTYRHMAEEL 302 (438)
T ss_dssp HHTTCCSSSEEEEEESCBSGGGCHHHHHHHHHHHHH-------HCTTCSEEEEEECCBC-----------CHHHHHHHHT
T ss_pred HhcCCCCCCcEEEEEeeecccCCHHHHHHHHHHHHh-------hCCCcceEEEEEeCCCCCCc-----HHHHHHHHHHHc
Confidence 899998889999999999999999999999999866 334 899999998 53 678899999999
Q ss_pred CCCCeEEEecCC--CChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCcceeeeeCCceeeecCCCCCh
Q 011954 336 KIQDHVHFVNKT--LTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGV 413 (474)
Q Consensus 336 ~l~~~v~~~g~~--~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~~e~v~~~~~G~l~~~~d~~~ 413 (474)
++.++|+|+|++ +++.++|+.||++|+||. .|+||++++|||+||+|||+++.||..|++.++.+|++++++| +
T Consensus 303 ~l~~~v~~~g~~~~~~~~~~~~~adv~v~ps~--~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~g~~~~~~d--~ 378 (438)
T 3c48_A 303 GVEKRIRFLDPRPPSELVAVYRAADIVAVPSF--NESFGLVAMEAQASGTPVIAARVGGLPIAVAEGETGLLVDGHS--P 378 (438)
T ss_dssp TCTTTEEEECCCCHHHHHHHHHHCSEEEECCS--CCSSCHHHHHHHHTTCCEEEESCTTHHHHSCBTTTEEEESSCC--H
T ss_pred CCCCcEEEcCCCChHHHHHHHHhCCEEEECcc--ccCCchHHHHHHHcCCCEEecCCCChhHHhhCCCcEEECCCCC--H
Confidence 999999999987 789999999999999998 8999999999999999999999999999999999999999988 9
Q ss_pred HHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhhhcCCCCCC
Q 011954 414 TPLANNIVKLATHVERRLTMGKKGYERVKDRFLEHHMSQRIALVLREVLQYAKIHQPQSH 473 (474)
Q Consensus 414 ~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (474)
++++++|.++++|++.+++|++++++++.+ |+|+.+++++.++|++++++.+....+.+
T Consensus 379 ~~la~~i~~l~~~~~~~~~~~~~~~~~~~~-~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (438)
T 3c48_A 379 HAWADALATLLDDDETRIRMGEDAVEHART-FSWAATAAQLSSLYNDAIANENVDGETHH 437 (438)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHTCCCCSCCCC
T ss_pred HHHHHHHHHHHcCHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHhhhcccCCCcCC
Confidence 999999999999999999999999999998 99999999999999999988766555544
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-46 Score=370.77 Aligned_cols=360 Identities=17% Similarity=0.187 Sum_probs=270.5
Q ss_pred ccccCEEEEEecCCCCCChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhcccchhcc-ceeeee--hh-------
Q 011954 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEHKMLDR-GVQVLS--AK------- 140 (474)
Q Consensus 71 ~~~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~------- 140 (474)
.|++|||+++++....||+++++.+++++|.+.||+|++++.............+...+... .+.+.. ..
T Consensus 37 ~~~~mkIl~v~~~~~~GG~~~~~~~l~~~L~~~G~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (416)
T 2x6q_A 37 KLKGRSFVHVNSTSFGGGVAEILHSLVPLLRSIGIEARWFVIEGPTEFFNVTKTFHNALQGNESLKLTEEMKELYLNVNR 116 (416)
T ss_dssp TTTTCEEEEEESCSSSSTHHHHHHHHHHHHHHTTCEEEEEECCCCHHHHHHHHHHHHHHTTCCSCCCCHHHHHHHHHHHH
T ss_pred hhhccEEEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCcchhhhhcccceeecccccccccHHHHHHHHHHHH
Confidence 46789999999987778999999999999999999999998654321111111111111111 111110 00
Q ss_pred cHHHHhhhcCCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccccchhh---hhhccccccccc-ccccccHHH
Q 011954 141 GEKAINTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYFKLE---YVKHLPFVAGAM-IDSYTTAEY 216 (474)
Q Consensus 141 ~~~~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~---~~~~~~~~~~~~-~~s~~~~~~ 216 (474)
....+.+..+||+||+|+.....+... .. . ..|++++.|+......... ..+.+...+..+ +.+...
T Consensus 117 ~~~~~l~~~~~Dvv~~~~~~~~~~~~~-~~----~-~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~--- 187 (416)
T 2x6q_A 117 ENSKFIDLSSFDYVLVHDPQPAALIEF-YE----K-KSPWLWRCHIDLSSPNREFWEFLRRFVEKYDRYIFHLPEYV--- 187 (416)
T ss_dssp HHHHSSCGGGSSEEEEESSTTGGGGGG-SC----C-CSCEEEECCSCCSSCCHHHHHHHHHHHTTSSEEEESSGGGS---
T ss_pred HHHHHHhhcCCCEEEEeccchhhHHHH-HH----h-cCCEEEEEccccCCccHHHHHHHHHHHHhCCEEEEechHHH---
Confidence 112223446899999998665443221 11 1 1688999997643322111 122233444433 333222
Q ss_pred HHHhHHHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHHHHHHHHHHH
Q 011954 217 WKNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESL 296 (474)
Q Consensus 217 ~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~ 296 (474)
.+ +++..++.|||||+|...+.+.... ...+..++++++++++.++|+++||+.+.||++.+++|+..+.
T Consensus 188 -~~------~~~~~~~~vi~ngvd~~~~~~~~~~---~~~~~~~r~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~ 257 (416)
T 2x6q_A 188 -QP------ELDRNKAVIMPPSIDPLSEKNVELK---QTEILRILERFDVDPEKPIITQVSRFDPWKGIFDVIEIYRKVK 257 (416)
T ss_dssp -CT------TSCTTTEEECCCCBCTTSTTTSCCC---HHHHHHHHHHTTCCTTSCEEEEECCCCTTSCHHHHHHHHHHHH
T ss_pred -Hh------hCCccceEEeCCCCChhhhcccccC---hhhHHHHHHHhCCCCCCcEEEEEeccccccCHHHHHHHHHHHH
Confidence 22 2344789999999998766532211 1125678899999888999999999999999999999999886
Q ss_pred HHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCCC-----ChHHHHhcCCEEEEcCCCCCCCC
Q 011954 297 QLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTL-----TVSPYLASIDVLVQNSQARGECF 371 (474)
Q Consensus 297 ~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~-----~~~~~~~~adv~v~ps~~~~E~~ 371 (474)
+ +.|+++|+|+|+|+..++++.+.++++++++++.++|+|+|+.. ++.++|+.||++|+||. .|||
T Consensus 258 ~-------~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~~~~~V~~~G~~~~~~~~~~~~~~~~ad~~v~ps~--~E~~ 328 (416)
T 2x6q_A 258 E-------KIPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAREVNAFQRASDVILQMSI--REGF 328 (416)
T ss_dssp H-------HCTTCEEEEEECCCTTCHHHHHHHHHHHHHHTTCTTEEEEEGGGTCCHHHHHHHHHHCSEEEECCS--SCSS
T ss_pred H-------hCCCeEEEEEecCcccchhHHHHHHHHHHHhCCCCcEEEecccCCCCHHHHHHHHHhCCEEEECCC--cCCC
Confidence 6 44899999999997544456788999999999999999999653 79999999999999999 8999
Q ss_pred chHHHHHHhcCCCEEEcCCCCcceeeeeCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHH
Q 011954 372 GRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRFLEHHMS 451 (474)
Q Consensus 372 ~~~~~EAma~G~PvI~s~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~fs~~~~~ 451 (474)
|++++|||+||+|||+|+.||++|++.++.+|++++ | +++++++|.++++|++.+++|++++++++.++|+|+.++
T Consensus 329 ~~~~lEAma~G~PvI~~~~~g~~e~i~~~~~g~l~~--d--~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~fs~~~~~ 404 (416)
T 2x6q_A 329 GLTVTEAMWKGKPVIGRAVGGIKFQIVDGETGFLVR--D--ANEAVEVVLYLLKHPEVSKEMGAKAKERVRKNFIITKHM 404 (416)
T ss_dssp CHHHHHHHHTTCCEEEESCHHHHHHCCBTTTEEEES--S--HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHTBHHHHH
T ss_pred ccHHHHHHHcCCCEEEccCCCChhheecCCCeEEEC--C--HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHcCHHHHH
Confidence 999999999999999999999999999999999998 6 999999999999999999999999999999899999999
Q ss_pred HHHHHHHHHHH
Q 011954 452 QRIALVLREVL 462 (474)
Q Consensus 452 ~~~~~~~~~~~ 462 (474)
+++.++|++++
T Consensus 405 ~~~~~~~~~l~ 415 (416)
T 2x6q_A 405 ERYLDILNSLG 415 (416)
T ss_dssp HHHHHHHHTC-
T ss_pred HHHHHHHHHhh
Confidence 99999998765
|
| >3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-46 Score=370.86 Aligned_cols=366 Identities=17% Similarity=0.122 Sum_probs=279.1
Q ss_pred ccCEEEEEecCCCC---CChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhcc----------cchhccceeeeeh
Q 011954 73 KSKLVLLVSHELSL---SGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLE----------HKMLDRGVQVLSA 139 (474)
Q Consensus 73 ~~~kIl~v~~~~~~---gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~ 139 (474)
++||||++++.+.+ ||+++++.+|+++|+++||+|+++++..+.........+. ......++.+...
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~ 80 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRI 80 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEEE
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEEEe
Confidence 47999999988655 8889999999999999999999999654433211000000 0001223333321
Q ss_pred hc--------------------------HHHHhh-----hcCCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccc
Q 011954 140 KG--------------------------EKAINT-----ALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMR 188 (474)
Q Consensus 140 ~~--------------------------~~~~~~-----~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~ 188 (474)
.. ...+.+ ..+||+||+|+...+.....+.+ . ...|+++++|+..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~-~---~~~~~v~~~h~~~ 156 (439)
T 3fro_A 81 GGGLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKK-Y---FKIPAVFTIHRLN 156 (439)
T ss_dssp ESGGGGCSSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESGGGHHHHHHHHH-H---HCCCEEEEESCCC
T ss_pred cchhccccccccCCcchhhhhhHHHHHHHHHHHHHHhccCCCCeEEEecchhhhhhHHHHhh-c---cCCCEEEEecccc
Confidence 11 011111 35999999998655433222221 1 3468999999875
Q ss_pred cccchh------------------hhhhcccccccccccccccHHHHHHhHHHHhcCCCCCeEEEeCCCCccccchhhhh
Q 011954 189 GHYFKL------------------EYVKHLPFVAGAMIDSYTTAEYWKNRTRERLGIRMPETYVVHLGNSKDLMDIAEDS 250 (474)
Q Consensus 189 ~~~~~~------------------~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~ 250 (474)
...... .....+..++.+++.|....+. ....++.+..++.|||||+|.+.|.+...+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~----~~~~~~~~~~~i~vi~ngvd~~~~~~~~~~ 232 (439)
T 3fro_A 157 KSKLPAFYFHEAGLSELAPYPDIDPEHTGGYIADIVTTVSRGYLID----EWGFFRNFEGKITYVFNGIDCSFWNESYLT 232 (439)
T ss_dssp CCCEEHHHHHHTTCGGGCCSSEECHHHHHHHHCSEEEESCHHHHHH----THHHHGGGTTSEEECCCCCCTTTSCGGGSC
T ss_pred cccCchHHhCccccccccccceeeHhhhhhhhccEEEecCHHHHHH----HhhhhhhcCCceeecCCCCCchhcCccccc
Confidence 332211 1122234556666666655544 334556788999999999999999876322
Q ss_pred HHHHHhHHHHHHhcCCCCCCEEEEEecccc-cCcchHHHHHHHHHHHHHHHHhccCC--CcEEEEEEcCCCCcCchHHHH
Q 011954 251 VARRVLREHVRESLGVRDDDLLFAIINSVS-RGKGQDLFLHSFYESLQLIREKKLQV--PSMHAVVVGSDMNAQTKFETE 327 (474)
Q Consensus 251 ~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~-~~Kg~~~ll~a~~~l~~~~~~~~~~~--~~~~l~i~G~g~~~~~~~~~~ 327 (474)
......+..++++++++++ ++|+++||+. +.||++.+++|++++.+ +. ++++|+|+|+|+. .+.+.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~-~~i~~~G~~~~~~Kg~~~li~a~~~l~~-------~~~~~~~~l~i~G~g~~---~~~~~ 301 (439)
T 3fro_A 233 GSRDERKKSLLSKFGMDEG-VTFMFIGRFDRGQKGVDVLLKAIEILSS-------KKEFQEMRFIIIGKGDP---ELEGW 301 (439)
T ss_dssp SCHHHHHHHHHHHHTCCSC-EEEEEECCSSCTTBCHHHHHHHHHHHHT-------SGGGGGEEEEEECCCCH---HHHHH
T ss_pred chhhhhHHHHHHHcCCCCC-cEEEEEcccccccccHHHHHHHHHHHHh-------cccCCCeEEEEEcCCCh---hHHHH
Confidence 2233446889999999877 9999999999 99999999999998865 33 7999999999861 24489
Q ss_pred HHHHHHHcCCCCeEEEecC--CCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCcceeeeeCCceee
Q 011954 328 LRNFVAEKKIQDHVHFVNK--TLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLL 405 (474)
Q Consensus 328 l~~~~~~~~l~~~v~~~g~--~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~~e~v~~~~~G~l 405 (474)
+++++++++ +.+.|.|+ .+++.++|+.||++|+||. .|+||++++|||+||+|||+|+.||..|++.++ +|++
T Consensus 302 l~~~~~~~~--~~~~~~g~~~~~~~~~~~~~adv~v~ps~--~e~~~~~~~EAma~G~Pvi~s~~~~~~e~~~~~-~g~~ 376 (439)
T 3fro_A 302 ARSLEEKHG--NVKVITEMLSREFVRELYGSVDFVIIPSY--FEPFGLVALEAMCLGAIPIASAVGGLRDIITNE-TGIL 376 (439)
T ss_dssp HHHHHHHCT--TEEEECSCCCHHHHHHHHTTCSEEEECBS--CCSSCHHHHHHHHTTCEEEEESSTHHHHHCCTT-TCEE
T ss_pred HHHHHhhcC--CEEEEcCCCCHHHHHHHHHHCCEEEeCCC--CCCccHHHHHHHHCCCCeEEcCCCCcceeEEcC-ceEE
Confidence 999999998 78899995 4779999999999999999 899999999999999999999999999999877 9999
Q ss_pred ecCCCCChHHHHHHHHHHhh-CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhh
Q 011954 406 HPTGKEGVTPLANNIVKLAT-HVERRLTMGKKGYERVKDRFLEHHMSQRIALVLREVLQYA 465 (474)
Q Consensus 406 ~~~~d~~~~~la~~i~~ll~-~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~~~ 465 (474)
++++| +++++++|.++++ |++.+++|++++++.+ ++|||+.+++++.++|++++++.
T Consensus 377 ~~~~d--~~~la~~i~~ll~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~ 434 (439)
T 3fro_A 377 VKAGD--PGELANAILKALELSRSDLSKFRENCKKRA-MSFSWEKSAERYVKAYTGSIDRA 434 (439)
T ss_dssp ECTTC--HHHHHHHHHHHHHHTTTTTHHHHHHHHHHH-HTSCHHHHHHHHHHHHHTCSCCB
T ss_pred eCCCC--HHHHHHHHHHHHhcCHHHHHHHHHHHHHHH-hhCcHHHHHHHHHHHHHHHHHhh
Confidence 99999 9999999999999 9999999999999999 56999999999999999998754
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-46 Score=365.58 Aligned_cols=357 Identities=21% Similarity=0.246 Sum_probs=277.2
Q ss_pred ccccCEEEEEecCCCC--CChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhcccchhccceeeee----------
Q 011954 71 FMKSKLVLLVSHELSL--SGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEHKMLDRGVQVLS---------- 138 (474)
Q Consensus 71 ~~~~~kIl~v~~~~~~--gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 138 (474)
+|++|||+++++.+++ ||+++++.+++++| .||+|++++.......... .....++.+..
T Consensus 1 M~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~ 72 (394)
T 3okp_A 1 MSASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHA------YDKTLDYEVIRWPRSVMLPTP 72 (394)
T ss_dssp ---CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHH------HHTTCSSEEEEESSSSCCSCH
T ss_pred CCCCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhh------hccccceEEEEccccccccch
Confidence 4678999999987764 78899999999999 6999999997654321000 00122333322
Q ss_pred --hhcHHHHhhhcCCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccccc-----hhhhhhccccccccccccc
Q 011954 139 --AKGEKAINTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYF-----KLEYVKHLPFVAGAMIDSY 211 (474)
Q Consensus 139 --~~~~~~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~-----~~~~~~~~~~~~~~~~~s~ 211 (474)
...+..+.+..+||+||+|......++....+.. ..+++++++|+....+. .......++.++.+++.|.
T Consensus 73 ~~~~~l~~~~~~~~~Dvv~~~~~~~~~~~~~~~~~~---~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~ 149 (394)
T 3okp_A 73 TTAHAMAEIIREREIDNVWFGAAAPLALMAGTAKQA---GASKVIASTHGHEVGWSMLPGSRQSLRKIGTEVDVLTYISQ 149 (394)
T ss_dssp HHHHHHHHHHHHTTCSEEEESSCTTGGGGHHHHHHT---TCSEEEEECCSTHHHHTTSHHHHHHHHHHHHHCSEEEESCH
T ss_pred hhHHHHHHHHHhcCCCEEEECCcchHHHHHHHHHhc---CCCcEEEEeccchhhhhhcchhhHHHHHHHHhCCEEEEcCH
Confidence 1234566677899999999865554444333221 12458888997532211 1122333456666666666
Q ss_pred ccHHHHHHhHHHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHHHHHH
Q 011954 212 TTAEYWKNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHS 291 (474)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a 291 (474)
...+.+. +.++ ...++.+||||+|.+.+.+.... .+..++++++++++.++|+++||+.+.||++.+++|
T Consensus 150 ~~~~~~~----~~~~-~~~~~~vi~ngv~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a 219 (394)
T 3okp_A 150 YTLRRFK----SAFG-SHPTFEHLPSGVDVKRFTPATPE-----DKSATRKKLGFTDTTPVIACNSRLVPRKGQDSLIKA 219 (394)
T ss_dssp HHHHHHH----HHHC-SSSEEEECCCCBCTTTSCCCCHH-----HHHHHHHHTTCCTTCCEEEEESCSCGGGCHHHHHHH
T ss_pred HHHHHHH----HhcC-CCCCeEEecCCcCHHHcCCCCch-----hhHHHHHhcCCCcCceEEEEEeccccccCHHHHHHH
Confidence 5555444 4455 45789999999999988763221 157789999999888999999999999999999999
Q ss_pred HHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCC--CChHHHHhcCCEEEEcCCCCC-
Q 011954 292 FYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKT--LTVSPYLASIDVLVQNSQARG- 368 (474)
Q Consensus 292 ~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~--~~~~~~~~~adv~v~ps~~~~- 368 (474)
+.++.+ ++++++|+|+|+|+ +.+.+++++ .++.++|+|+|++ +++.++|+.||++|+||. .
T Consensus 220 ~~~l~~-------~~~~~~l~i~G~g~-----~~~~l~~~~--~~~~~~v~~~g~~~~~~~~~~~~~ad~~v~ps~--~~ 283 (394)
T 3okp_A 220 MPQVIA-------ARPDAQLLIVGSGR-----YESTLRRLA--TDVSQNVKFLGRLEYQDMINTLAAADIFAMPAR--TR 283 (394)
T ss_dssp HHHHHH-------HSTTCEEEEECCCT-----THHHHHHHT--GGGGGGEEEEESCCHHHHHHHHHHCSEEEECCC--CB
T ss_pred HHHHHh-------hCCCeEEEEEcCch-----HHHHHHHHH--hcccCeEEEcCCCCHHHHHHHHHhCCEEEecCc--cc
Confidence 998876 45899999999986 778888888 5666899999987 899999999999999999 6
Q ss_pred ------CCCchHHHHHHhcCCCEEEcCCCCcceeeeeCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Q 011954 369 ------ECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVK 442 (474)
Q Consensus 369 ------E~~~~~~~EAma~G~PvI~s~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~ 442 (474)
|++|++++|||++|+|||+++.||..|++.++ +|++++++| +++++++|.++++|++.++++++++++++.
T Consensus 284 ~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~~-~g~~~~~~d--~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~ 360 (394)
T 3okp_A 284 GGGLDVEGLGIVYLEAQACGVPVIAGTSGGAPETVTPA-TGLVVEGSD--VDKLSELLIELLDDPIRRAAMGAAGRAHVE 360 (394)
T ss_dssp GGGTBCCSSCHHHHHHHHTTCCEEECSSTTGGGGCCTT-TEEECCTTC--HHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred cccccccccCcHHHHHHHcCCCEEEeCCCChHHHHhcC-CceEeCCCC--HHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999888 999999998 999999999999999999999999999999
Q ss_pred HhcCHHHHHHHHHHHHHHHHhhhhc
Q 011954 443 DRFLEHHMSQRIALVLREVLQYAKI 467 (474)
Q Consensus 443 ~~fs~~~~~~~~~~~~~~~~~~~~~ 467 (474)
++|+|+.+++++.++|+++..+...
T Consensus 361 ~~~s~~~~~~~~~~~~~~~~r~~~~ 385 (394)
T 3okp_A 361 AEWSWEIMGERLTNILQSEPRKLAA 385 (394)
T ss_dssp HHTBHHHHHHHHHHHHHSCCC----
T ss_pred HhCCHHHHHHHHHHHHHHhccCcch
Confidence 9999999999999999998865543
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-46 Score=377.39 Aligned_cols=373 Identities=15% Similarity=0.150 Sum_probs=275.2
Q ss_pred cCEEEEEecCCC-------------CCChhHHHHHHHHHHHhcCcEEEEEeCCCCCCc-hhhhhhcccchhccceeeeeh
Q 011954 74 SKLVLLVSHELS-------------LSGGPLLLMELAFLLRGVGAEVVWITNQKPNEP-DEVIYSLEHKMLDRGVQVLSA 139 (474)
Q Consensus 74 ~~kIl~v~~~~~-------------~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 139 (474)
+|||+++++.+. .||+++++.+|+++|.+.||+|+|++....... ......+.......++.++..
T Consensus 7 ~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~ 86 (499)
T 2r60_A 7 IKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIKDENWPEFSGEIDYYQETNKVRIVRI 86 (499)
T ss_dssp CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECCCBTTBGGGCCSEEECTTCSSEEEEEE
T ss_pred cceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEEeCCCCcccccchhhhHHhccCCCCeEEEEe
Confidence 589999998653 377789999999999999999999996543211 000000000000123332211
Q ss_pred ---------------------hcHHHHhhh--cCCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccccch---
Q 011954 140 ---------------------KGEKAINTA--LNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYFK--- 193 (474)
Q Consensus 140 ---------------------~~~~~~~~~--~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~--- 193 (474)
..+..+.+. .+||+||+|+...+.... .+... ...|+++++|+.......
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~Divh~~~~~~~~~~~-~~~~~---~~~p~v~~~H~~~~~~~~~~~ 162 (499)
T 2r60_A 87 PFGGDKFLPKEELWPYLHEYVNKIINFYREEGKFPQVVTTHYGDGGLAGV-LLKNI---KGLPFTFTGHSLGAQKMEKLN 162 (499)
T ss_dssp CCSCSSCCCGGGCGGGHHHHHHHHHHHHHHHTCCCSEEEEEHHHHHHHHH-HHHHH---HCCCEEEECSSCHHHHHHTTC
T ss_pred cCCCcCCcCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEcCCcchHHHH-HHHHh---cCCcEEEEccCcccccchhhc
Confidence 112233333 589999999754433222 22211 235889999986321110
Q ss_pred ----------h---------hhhhcccccccccccccccHHHHHHhHHHH--hc-C----CCCCeEEEeCCCCccccchh
Q 011954 194 ----------L---------EYVKHLPFVAGAMIDSYTTAEYWKNRTRER--LG-I----RMPETYVVHLGNSKDLMDIA 247 (474)
Q Consensus 194 ----------~---------~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~--~~-~----~~~ki~vi~ngvd~~~~~~~ 247 (474)
. .....++.++.+++.|....+. +.+. +| + +..++.|||||+|.+.|.+.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~----~~~~~~~g~~~~~~~~~ki~vi~ngvd~~~~~~~ 238 (499)
T 2r60_A 163 VNTSNFKEMDERFKFHRRIIAERLTMSYADKIIVSTSQERFG----QYSHDLYRGAVNVEDDDKFSVIPPGVNTRVFDGE 238 (499)
T ss_dssp CCSTTSHHHHHHHCHHHHHHHHHHHHHHCSEEEESSHHHHHH----TTTSGGGTTTCCTTCGGGEEECCCCBCTTTSSSC
T ss_pred cCCCCcchhhhhHHHHHHHHHHHHHHhcCCEEEECCHHHHHH----HHhhhcccccccccCCCCeEEECCCcChhhcCcc
Confidence 0 0122234556666666555444 3334 56 5 66789999999999988765
Q ss_pred hhhHHHHHhHHHHHHhcC-----CCCCCEEEEEecccccCcchHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCc--
Q 011954 248 EDSVARRVLREHVRESLG-----VRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNA-- 320 (474)
Q Consensus 248 ~~~~~~~~~~~~~r~~~~-----~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~-- 320 (474)
... ..+..+|+++| ++.+.++|+++||+.+.||++.+++|+..+.+... ..++|+|+|+++..
T Consensus 239 ~~~----~~~~~~r~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~------~~~~l~i~G~~~~~~~ 308 (499)
T 2r60_A 239 YGD----KIKAKITKYLERDLGSERMELPAIIASSRLDQKKNHYGLVEAYVQNKELQD------KANLVLTLRGIENPFE 308 (499)
T ss_dssp CCH----HHHHHHHHHHHHHSCGGGTTSCEEEECSCCCGGGCHHHHHHHHHTCHHHHH------HCEEEEEESSCSBTTT
T ss_pred chh----hhHHHHHHHhcccccccCCCCcEEEEeecCccccCHHHHHHHHHHHHHhCC------CceEEEEECCCCCccc
Confidence 321 12456788888 77788899999999999999999999998865321 24689999983211
Q ss_pred --------CchHHHHHHHHHHHcCCCCeEEEecCC--CChHHHHhcC----CEEEEcCCCCCCCCchHHHHHHhcCCCEE
Q 011954 321 --------QTKFETELRNFVAEKKIQDHVHFVNKT--LTVSPYLASI----DVLVQNSQARGECFGRITIEAMAFQLPVL 386 (474)
Q Consensus 321 --------~~~~~~~l~~~~~~~~l~~~v~~~g~~--~~~~~~~~~a----dv~v~ps~~~~E~~~~~~~EAma~G~PvI 386 (474)
..++.++++++++++++.++|+|+|++ +++.++|+.| |++|+||. .||||++++|||+||+|||
T Consensus 309 ~y~~l~~~~~~y~~~l~~~~~~~~l~~~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~--~Eg~~~~~lEAma~G~PvI 386 (499)
T 2r60_A 309 DYSRAGQEEKEILGKIIELIDNNDCRGKVSMFPLNSQQELAGCYAYLASKGSVFALTSF--YEPFGLAPVEAMASGLPAV 386 (499)
T ss_dssp BCTTSCHHHHHHHHHHHHHHHHTTCBTTEEEEECCSHHHHHHHHHHHHHTTCEEEECCS--CBCCCSHHHHHHHTTCCEE
T ss_pred ccccccccchHHHHHHHHHHHhcCCCceEEECCCCCHHHHHHHHHhcCcCCCEEEECcc--cCCCCcHHHHHHHcCCCEE
Confidence 111278999999999999999999986 8899999999 99999999 8999999999999999999
Q ss_pred EcCCCCcceeeeeCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhhh
Q 011954 387 GTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRFLEHHMSQRIALVLREVLQYAK 466 (474)
Q Consensus 387 ~s~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~~~~ 466 (474)
+|+.||+.|++.++.+|++++++| +++++++|.++++|++.+++|++++++++.++|||+.+++++.++|++++.++.
T Consensus 387 ~s~~~g~~e~v~~~~~g~l~~~~d--~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~~~~~~ 464 (499)
T 2r60_A 387 VTRNGGPAEILDGGKYGVLVDPED--PEDIARGLLKAFESEETWSAYQEKGKQRVEERYTWQETARGYLEVIQEIADRKD 464 (499)
T ss_dssp EESSBHHHHHTGGGTSSEEECTTC--HHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHSBHHHHHHHHHHHHHHHHHC--
T ss_pred EecCCCHHHHhcCCceEEEeCCCC--HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhhh
Confidence 999999999999999999999998 999999999999999999999999999999999999999999999999998654
Q ss_pred cC
Q 011954 467 IH 468 (474)
Q Consensus 467 ~~ 468 (474)
..
T Consensus 465 ~~ 466 (499)
T 2r60_A 465 EE 466 (499)
T ss_dssp --
T ss_pred hh
Confidence 43
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-45 Score=358.46 Aligned_cols=350 Identities=20% Similarity=0.231 Sum_probs=263.3
Q ss_pred CCChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhcc-cchhccceeee--------ehhcHHHHhhhcCCCEEEE
Q 011954 86 LSGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLE-HKMLDRGVQVL--------SAKGEKAINTALNADLVVL 156 (474)
Q Consensus 86 ~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--------~~~~~~~~~~~~~~DiV~~ 156 (474)
.||+++++.+|+++|.++||+|++++...+.........+. ..+........ ....+..+.+..+||+||+
T Consensus 26 ~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~Dvv~~ 105 (394)
T 2jjm_A 26 VGGSGVVGTELGKQLAERGHEIHFITSGLPFRLNKVYPNIYFHEVTVNQYSVFQYPPYDLALASKMAEVAQRENLDILHV 105 (394)
T ss_dssp -CHHHHHHHHHHHHHHHTTCEEEEECSSCC----CCCTTEEEECCCCC----CCSCCHHHHHHHHHHHHHHHHTCSEEEE
T ss_pred CCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCcccccCCceEEEecccccccccccccccHHHHHHHHHHHHHcCCCEEEE
Confidence 48889999999999999999999999754321100000000 00000000000 0112344556689999999
Q ss_pred cccchhhHHhHHhhhcccccccceeeeeecccccc------chhhhhhcccccccccccccccHHHHHHhHHHHhcCCCC
Q 011954 157 NTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHY------FKLEYVKHLPFVAGAMIDSYTTAEYWKNRTRERLGIRMP 230 (474)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~------~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 230 (474)
|+.....+...+..... ....|+++++|+..... +.......++.++.+++.|....+.+. +.++. ..
T Consensus 106 ~~~~~~~~~~~~~~~~~-~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~----~~~~~-~~ 179 (394)
T 2jjm_A 106 HYAIPHAICAYLAKQMI-GERIKIVTTLHGTDITVLGSDPSLNNLIRFGIEQSDVVTAVSHSLINETH----ELVKP-NK 179 (394)
T ss_dssp CSSTTHHHHHHHHHHHT-TTCSEEEEECCHHHHHTTTTCTTTHHHHHHHHHHSSEEEESCHHHHHHHH----HHTCC-SS
T ss_pred cchhHHHHHHHHHHHhh-cCCCCEEEEEecCcccccCCCHHHHHHHHHHHhhCCEEEECCHHHHHHHH----HhhCC-cc
Confidence 97654433332222211 11358899999853211 111223334566666666666555443 34444 57
Q ss_pred CeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHHHHHHHHHHHHHHHHhccCCCcEE
Q 011954 231 ETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMH 310 (474)
Q Consensus 231 ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~ 310 (474)
++.+||||+|.+.+.+.. +..++++++++++.++|+++|++.+.||++.+++|+..+.+ + ++++
T Consensus 180 ~~~vi~ngv~~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~-------~-~~~~ 243 (394)
T 2jjm_A 180 DIQTVYNFIDERVYFKRD--------MTQLKKEYGISESEKILIHISNFRKVKRVQDVVQAFAKIVT-------E-VDAK 243 (394)
T ss_dssp CEEECCCCCCTTTCCCCC--------CHHHHHHTTCC---CEEEEECCCCGGGTHHHHHHHHHHHHH-------S-SCCE
T ss_pred cEEEecCCccHHhcCCcc--------hHHHHHHcCCCCCCeEEEEeeccccccCHHHHHHHHHHHHh-------h-CCCE
Confidence 899999999999887653 24577889988888999999999999999999999998865 3 5789
Q ss_pred EEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCCCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCC
Q 011954 311 AVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAA 390 (474)
Q Consensus 311 l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~ 390 (474)
|+|+|+|+ ..++++++++++++.++|.|+|+.+++.++|+.||++|+||. .|+||++++|||+||+|||+++.
T Consensus 244 l~i~G~g~-----~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv~v~ps~--~e~~~~~~~EAma~G~PvI~~~~ 316 (394)
T 2jjm_A 244 LLLVGDGP-----EFCTILQLVKNLHIEDRVLFLGKQDNVAELLAMSDLMLLLSE--KESFGLVLLEAMACGVPCIGTRV 316 (394)
T ss_dssp EEEECCCT-----THHHHHHHHHTTTCGGGBCCCBSCSCTHHHHHTCSEEEECCS--CCSCCHHHHHHHHTTCCEEEECC
T ss_pred EEEECCch-----HHHHHHHHHHHcCCCCeEEEeCchhhHHHHHHhCCEEEeccc--cCCCchHHHHHHhcCCCEEEecC
Confidence 99999986 678999999999999999999999999999999999999999 89999999999999999999999
Q ss_pred CCcceeeeeCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhhh
Q 011954 391 GGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRFLEHHMSQRIALVLREVLQYAK 466 (474)
Q Consensus 391 ~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~~~~ 466 (474)
||..|++.++.+|++++++| +++++++|.++++|++.+++|++++++++.++|+|+.++++++++|++++++.+
T Consensus 317 ~~~~e~v~~~~~g~~~~~~d--~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 390 (394)
T 2jjm_A 317 GGIPEVIQHGDTGYLCEVGD--TTGVADQAIQLLKDEELHRNMGERARESVYEQFRSEKIVSQYETIYYDVLRDDK 390 (394)
T ss_dssp TTSTTTCCBTTTEEEECTTC--HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHTC----
T ss_pred CChHHHhhcCCceEEeCCCC--HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhhh
Confidence 99999999999999999998 999999999999999999999999999998889999999999999999987643
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-44 Score=355.21 Aligned_cols=358 Identities=16% Similarity=0.142 Sum_probs=269.0
Q ss_pred CEEEEEecCCCC-CChhHHHHHHHHHHHhcCcEEEEEeCCCCCCc-hhhhh--hcccchhcccee--eeehhcHHHHhhh
Q 011954 75 KLVLLVSHELSL-SGGPLLLMELAFLLRGVGAEVVWITNQKPNEP-DEVIY--SLEHKMLDRGVQ--VLSAKGEKAINTA 148 (474)
Q Consensus 75 ~kIl~v~~~~~~-gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~-~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~~ 148 (474)
|||+++++.++. ||+++++.+|+++|.+. |+|++++....... ..... ..........+. .+.........+.
T Consensus 1 MkI~~v~~~~p~~gG~~~~~~~l~~~L~~~-~~V~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 79 (413)
T 3oy2_A 1 MKLIIVGAHSSVPSGYGRVMRAIVPRISKA-HEVIVFGIHAFGRSVHANIEEFDAQTAEHVRGLNEQGFYYSGLSEFIDV 79 (413)
T ss_dssp CEEEEEEECTTCCSHHHHHHHHHHHHHTTT-SEEEEEEESCCSCCSCSSSEEEEHHHHHHHTTCCSTTCCHHHHHHHHHH
T ss_pred CeEEEecCCCCCCCCHHHHHHHHHHHHHhc-CCeEEEeecCCCcccccccccCCccccccccccccccchHHHHHHHHHh
Confidence 799999987665 66689999999999999 99999985432111 00000 000000001111 1122233455567
Q ss_pred cCCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccccchhhhhhcccccc--cccccccccHHHHHHhHHHHhc
Q 011954 149 LNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYFKLEYVKHLPFVA--GAMIDSYTTAEYWKNRTRERLG 226 (474)
Q Consensus 149 ~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~--~~~~~s~~~~~~~~~~~~~~~~ 226 (474)
.+||+||+|...............++. ..+.+...|......... ....+...+ .+++.|....+.+.+ ++
T Consensus 80 ~~~Div~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ii~~S~~~~~~~~~-----~~ 152 (413)
T 3oy2_A 80 HKPDIVMIYNDPIVIGNYLLAMGKCSH-RTKIVLYVDLVSKNIREN-LWWIFSHPKVVGVMAMSKCWISDICN-----YG 152 (413)
T ss_dssp HCCSEEEEEECHHHHHHHHHHGGGCCS-CCEEEEEECCCSBSCCGG-GGGGGGCTTEEEEEESSTHHHHHHHH-----TT
T ss_pred cCCCEEEEcchHHHHHHHHHHhccCCC-CCceeeeccccchhhHHH-HHHHHhccCCceEEEcCHHHHHHHHH-----cC
Confidence 899999999543322211222222222 245566666553333222 344556655 777777776665543 56
Q ss_pred CCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCC--CCEEEEEecccccCcchHHHHHHHHHHHHHHHHhcc
Q 011954 227 IRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRD--DDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKL 304 (474)
Q Consensus 227 ~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~--~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~ 304 (474)
. ..++.+||||+|.+.|. ..++++++++ +.++|+++||+.+.||++.+++|+.++.+
T Consensus 153 ~-~~~~~vi~ngvd~~~~~-------------~~~~~~~~~~~~~~~~il~vGr~~~~Kg~~~li~a~~~l~~------- 211 (413)
T 3oy2_A 153 C-KVPINIVSHFVDTKTIY-------------DARKLVGLSEYNDDVLFLNMNRNTARKRLDIYVLAAARFIS------- 211 (413)
T ss_dssp C-CSCEEECCCCCCCCCCT-------------THHHHTTCGGGTTSEEEECCSCSSGGGTHHHHHHHHHHHHH-------
T ss_pred C-CCceEEeCCCCCHHHHH-------------HHHHhcCCCcccCceEEEEcCCCchhcCcHHHHHHHHHHHH-------
Confidence 5 57899999999998872 2356678877 78999999999999999999999999866
Q ss_pred CCCcEEEEEEcCCCCcC-chHHHHHHHHHHHcCCCCe-------EEEecCC--CChHHHHhcCCEEEEcCCCCCCCCchH
Q 011954 305 QVPSMHAVVVGSDMNAQ-TKFETELRNFVAEKKIQDH-------VHFVNKT--LTVSPYLASIDVLVQNSQARGECFGRI 374 (474)
Q Consensus 305 ~~~~~~l~i~G~g~~~~-~~~~~~l~~~~~~~~l~~~-------v~~~g~~--~~~~~~~~~adv~v~ps~~~~E~~~~~ 374 (474)
++++++|+|+|+|+... .+..+.++++++++++.++ +.+.|+. +++.++|+.||++|+||. .|+||++
T Consensus 212 ~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g~~~~~~~~~~~~~adv~v~pS~--~E~~~~~ 289 (413)
T 3oy2_A 212 KYPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNKIMINRTVLTDERVDMMYNACDVIVNCSS--GEGFGLC 289 (413)
T ss_dssp HCTTCCEEEEEECCTTCSCCHHHHHHHHHHHHTCSCHHHHHTTEEEECSCCCHHHHHHHHHHCSEEEECCS--CCSSCHH
T ss_pred hCCCcEEEEEeCCcccchhhHHHHHHHHHHHcCcccccccccceeeccCcCCHHHHHHHHHhCCEEEeCCC--cCCCCcH
Confidence 45899999999987432 1245899999999999886 8888986 589999999999999999 8999999
Q ss_pred HHHHHhcCCCEEEcCCCCcceeeeeCCc---------------ee--eecCCCCChHHHHHHHHHHhhCHHHHHHHHHHH
Q 011954 375 TIEAMAFQLPVLGTAAGGTMEIVVNGTT---------------GL--LHPTGKEGVTPLANNIVKLATHVERRLTMGKKG 437 (474)
Q Consensus 375 ~~EAma~G~PvI~s~~~g~~e~v~~~~~---------------G~--l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~ 437 (474)
++|||+||+|||+|+.||.+|++.++.+ |+ +++++| +++++++| ++++|++.+++|++++
T Consensus 290 ~lEAma~G~PvI~s~~~g~~e~v~~~~~~~i~~~~~~~~~~~~G~~gl~~~~d--~~~la~~i-~l~~~~~~~~~~~~~a 366 (413)
T 3oy2_A 290 SAEGAVLGKPLIISAVGGADDYFSGDCVYKIKPSAWISVDDRDGIGGIEGIID--VDDLVEAF-TFFKDEKNRKEYGKRV 366 (413)
T ss_dssp HHHHHTTTCCEEEECCHHHHHHSCTTTSEEECCCEEEECTTTCSSCCEEEECC--HHHHHHHH-HHTTSHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEcCCCChHHHHccCcccccccccccccccccCcceeeCCCC--HHHHHHHH-HHhcCHHHHHHHHHHH
Confidence 9999999999999999999999988887 99 999998 99999999 9999999999999999
Q ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHhhhh
Q 011954 438 YERVKDRFLEHHMSQRIALVLREVLQYAK 466 (474)
Q Consensus 438 ~~~~~~~fs~~~~~~~~~~~~~~~~~~~~ 466 (474)
++++.++|||+.++++++++|+++++++.
T Consensus 367 ~~~~~~~fs~~~~~~~~~~~~~~~~~~~~ 395 (413)
T 3oy2_A 367 QDFVKTKPTWDDISSDIIDFFNSLLRVES 395 (413)
T ss_dssp HHHHTTSCCHHHHHHHHHHHHHHHTC---
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHhhcC
Confidence 99999899999999999999999997653
|
| >1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-44 Score=360.02 Aligned_cols=367 Identities=18% Similarity=0.139 Sum_probs=265.8
Q ss_pred CEEEEEecCCCC----CChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhh-----hc-------ccc--hhccceee
Q 011954 75 KLVLLVSHELSL----SGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIY-----SL-------EHK--MLDRGVQV 136 (474)
Q Consensus 75 ~kIl~v~~~~~~----gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~-----~~-------~~~--~~~~~~~~ 136 (474)
||||++++.+.| ||+++++.+|+++|.++||+|+|++...+........ .+ ... ....++.+
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v 80 (485)
T 1rzu_A 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPAVKAAVTDPVKCFEFTDLLGEKADLLEVQHERLDL 80 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCHHHHHHCCSCEEEEEESCSSSCCEEEEEEEETTEEE
T ss_pred CeEEEEeeeeccccccccHHHHHHHHHHHHHHcCCeEEEEecccccccccccccceeEEEEEecCCeEEEEEEEecCceE
Confidence 789999987643 7779999999999999999999999653210000000 00 000 00123333
Q ss_pred eehh--------------------------------cHHHHh----hhcCCCEEEEcccchhhHHhHHhhhcccccccce
Q 011954 137 LSAK--------------------------------GEKAIN----TALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKV 180 (474)
Q Consensus 137 ~~~~--------------------------------~~~~~~----~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (474)
+... ....+. +..+||+||+|+...+.+ ...+... .....|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DiIh~~~~~~~~~-~~~~~~~-~~~~~p~ 158 (485)
T 1rzu_A 81 LILDAPAYYERSGGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVLPGWRPDMVHAHDWQAAMT-PVYMRYA-ETPEIPS 158 (485)
T ss_dssp EEEECHHHHCSSSCSSBCTTSSBCTTHHHHHHHHHHHHHHHHTTCSSSCCCSEEEEEHHHHTTH-HHHHHHS-SSCCCCE
T ss_pred EEEeChHHhCCCccccCCcccccccchHHHHHHHHHHHHHHHHHhccCCCCCEEEecccchhHH-HHHHhhc-ccCCCCE
Confidence 2110 011122 256899999998544332 2222211 1134689
Q ss_pred eeeeecccccc-ch-------------------------hhhhhcccccccccccccccHHHHHHhHHHHhc--------
Q 011954 181 LWWIHEMRGHY-FK-------------------------LEYVKHLPFVAGAMIDSYTTAEYWKNRTRERLG-------- 226 (474)
Q Consensus 181 v~~~h~~~~~~-~~-------------------------~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~-------- 226 (474)
++++|+..... .. ......+..++.+++.|....+.+.+. .+|
T Consensus 159 v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~---~~g~~~~~~~~ 235 (485)
T 1rzu_A 159 LLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAEEILTA---EFGMGLEGVIG 235 (485)
T ss_dssp EEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHHCSEEEESCHHHHHHTTSH---HHHTTCHHHHH
T ss_pred EEEecCccccCCCCHHHHhhcCCChhhcccccccccccccHHHHHHhhcCEEEecCHhHHHHHhcc---ccCcchHHHHH
Confidence 99999863211 00 011122345566666666655554331 123
Q ss_pred CCCCCeEEEeCCCCccccchhhhh-----------HHHHHhHHHHHHhcCCCCC-CEEEEEecccccCcchHHHHHHHHH
Q 011954 227 IRMPETYVVHLGNSKDLMDIAEDS-----------VARRVLREHVRESLGVRDD-DLLFAIINSVSRGKGQDLFLHSFYE 294 (474)
Q Consensus 227 ~~~~ki~vi~ngvd~~~~~~~~~~-----------~~~~~~~~~~r~~~~~~~~-~~~i~~vgrl~~~Kg~~~ll~a~~~ 294 (474)
.+..++.|||||+|.+.|.+.... ..+...+..++++++++++ .++|+++||+.+.||++.+++|+.+
T Consensus 236 ~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~ 315 (485)
T 1rzu_A 236 SRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDE 315 (485)
T ss_dssp TTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHTCCCSSSCEEEEESCBSTTTTHHHHHTTHHH
T ss_pred hhcCCceEEcCCCcccccCCcccccccccccccchhhHHHhHHHHHHhcCCCCCCCeEEEEEccCccccCHHHHHHHHHH
Confidence 456889999999999988765321 0112235678999999875 6799999999999999999999998
Q ss_pred HHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEE-EecCCCC-hHHHHhcCCEEEEcCCCCCCCCc
Q 011954 295 SLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVH-FVNKTLT-VSPYLASIDVLVQNSQARGECFG 372 (474)
Q Consensus 295 l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~-~~g~~~~-~~~~~~~adv~v~ps~~~~E~~~ 372 (474)
+.+ ++++|+|+|+|+. ++.+.+++++++++ ++|+ |.|+.++ +..+|+.||++|+||. .|+||
T Consensus 316 l~~---------~~~~l~ivG~g~~---~~~~~l~~~~~~~~--~~v~~~~g~~~~~~~~~~~~adv~v~pS~--~E~~~ 379 (485)
T 1rzu_A 316 IVS---------LGGRLVVLGAGDV---ALEGALLAAASRHH--GRVGVAIGYNEPLSHLMQAGCDAIIIPSR--FEPCG 379 (485)
T ss_dssp HHH---------TTCEEEEEECBCH---HHHHHHHHHHHHTT--TTEEEEESCCHHHHHHHHHHCSEEEECCS--CCSSC
T ss_pred HHh---------cCceEEEEeCCch---HHHHHHHHHHHhCC--CcEEEecCCCHHHHHHHHhcCCEEEECcc--cCCCC
Confidence 865 6899999999851 25788999999886 6787 7898644 5899999999999999 89999
Q ss_pred hHHHHHHhcCCCEEEcCCCCcceeeeeC---------CceeeecCCCCChHHHHHHHHHHh---hCHHHHHHHHHHHHHH
Q 011954 373 RITIEAMAFQLPVLGTAAGGTMEIVVNG---------TTGLLHPTGKEGVTPLANNIVKLA---THVERRLTMGKKGYER 440 (474)
Q Consensus 373 ~~~~EAma~G~PvI~s~~~g~~e~v~~~---------~~G~l~~~~d~~~~~la~~i~~ll---~~~~~~~~~~~~~~~~ 440 (474)
++++|||+||+|||+|+.||+.|++.++ .+|++++++| +++|+++|.+++ +|++.+++|++++++
T Consensus 380 ~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~~~~d--~~~la~~i~~ll~~~~~~~~~~~~~~~~~~- 456 (485)
T 1rzu_A 380 LTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSPVT--LDGLKQAIRRTVRYYHDPKLWTQMQKLGMK- 456 (485)
T ss_dssp SHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSCS--HHHHHHHHHHHHHHHTCHHHHHHHHHHHHT-
T ss_pred HHHHHHHHCCCCEEEeCCCChhheecccccccccccCCcceEeCCCC--HHHHHHHHHHHHHHhCCHHHHHHHHHHHHH-
Confidence 9999999999999999999999999988 8999999998 999999999999 799999999999875
Q ss_pred HHHhcCHHHHHHHHHHHHHHHHhhhhc
Q 011954 441 VKDRFLEHHMSQRIALVLREVLQYAKI 467 (474)
Q Consensus 441 ~~~~fs~~~~~~~~~~~~~~~~~~~~~ 467 (474)
++|||+.++++|+++|++++.....
T Consensus 457 --~~fs~~~~~~~~~~~y~~~~~~~~~ 481 (485)
T 1rzu_A 457 --SDVSWEKSAGLYAALYSQLISKGHH 481 (485)
T ss_dssp --CCCBHHHHHHHHHHHHHHHTC----
T ss_pred --HhCChHHHHHHHHHHHHHhhCCCCC
Confidence 7799999999999999999876543
|
| >2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-43 Score=356.62 Aligned_cols=365 Identities=15% Similarity=0.102 Sum_probs=263.3
Q ss_pred CEEEEEecCCC----CCChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhh--------hc--ccch---hccceeee
Q 011954 75 KLVLLVSHELS----LSGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIY--------SL--EHKM---LDRGVQVL 137 (474)
Q Consensus 75 ~kIl~v~~~~~----~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~--------~~--~~~~---~~~~~~~~ 137 (474)
|||+++++.+. .||+++++.+|+++|.++||+|+|++...+........ .+ ...+ ...++.++
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~ 80 (485)
T 2qzs_A 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFPDIRRGVTDAQVVSRRDTFAGHITLLFGHYNGVGIY 80 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTTCEEEEEEECCHHHHHHCTTCEEEEEECCTTCCEEEEEEEETTEEEE
T ss_pred CeEEEEeeeccccccCCcHHHHHHHHHHHHHHcCCEEEEEecCccccccccccceeEEEecccCCcEEEEEEEECCcEEE
Confidence 78999998754 37789999999999999999999999653211000000 00 0000 01233322
Q ss_pred eh--------------------------------hcHHHHhh----hcCCCEEEEcccchhhHHhHHhhhccccccccee
Q 011954 138 SA--------------------------------KGEKAINT----ALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVL 181 (474)
Q Consensus 138 ~~--------------------------------~~~~~~~~----~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v 181 (474)
.. .....+.+ ..+||+||+|+...+.+ ...+.. .....|++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Divh~~~~~~~~~-~~~~~~--~~~~~p~v 157 (485)
T 2qzs_A 81 LIDAPHLYDRPGSPYHDTNLFAYTDNVLRFALLGWVGAEMASGLDPFWRPDVVHAHDWHAGLA-PAYLAA--RGRPAKSV 157 (485)
T ss_dssp EEECHHHHCCSSCSSBCTTSCBCTTHHHHHHHHHHHHHHHTTTSSTTCCCSEEEEETGGGTTH-HHHHHH--TTCSSEEE
T ss_pred EEeChhhccCCCCccCCcccCCCCchHHHHHHHHHHHHHHHHHhccCCCCCEEEeeccchhHH-HHHHhh--ccCCCCEE
Confidence 11 01112223 26899999998554433 222221 11346899
Q ss_pred eeeecccccc-ch-------------------------hhhhhcccccccccccccccHHHHHHhHHHHhcCC-------
Q 011954 182 WWIHEMRGHY-FK-------------------------LEYVKHLPFVAGAMIDSYTTAEYWKNRTRERLGIR------- 228 (474)
Q Consensus 182 ~~~h~~~~~~-~~-------------------------~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~------- 228 (474)
+++|+..... .. ......+..++.+++.|....+.+.+. .+|..
T Consensus 158 ~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~---~~~~~~~~~~~~ 234 (485)
T 2qzs_A 158 FTVHNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYYADHITAVSPTYAREITEP---QFAYGMEGLLQQ 234 (485)
T ss_dssp EEESCTTCCCEEEGGGGGTTTCCGGGCSTTTTEETTEEEHHHHHHHHCSEEEESSHHHHHHTTSH---HHHTTCHHHHHH
T ss_pred EEecCccccCCCCHHHHHhcCCCchhcccccccccccccHHHHHHHhcCeEEecCHHHHHHHhcc---ccCcchHHHHHh
Confidence 9999863211 00 001112344556666666555544321 13432
Q ss_pred -C--CCeEEEeCCCCccccchhhhh-----------HHHHHhHHHHHHhcCCCC--CCEEEEEecccccCcchHHHHHHH
Q 011954 229 -M--PETYVVHLGNSKDLMDIAEDS-----------VARRVLREHVRESLGVRD--DDLLFAIINSVSRGKGQDLFLHSF 292 (474)
Q Consensus 229 -~--~ki~vi~ngvd~~~~~~~~~~-----------~~~~~~~~~~r~~~~~~~--~~~~i~~vgrl~~~Kg~~~ll~a~ 292 (474)
. .++.|||||+|.+.|.+.... ......+..++++++++. +.++|+++||+.+.||++.+++|+
T Consensus 235 ~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~ 314 (485)
T 2qzs_A 235 RHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQLQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEAL 314 (485)
T ss_dssp HHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHHHHHHHHTCCCCTTSCEEEEEEEESGGGCHHHHHHHH
T ss_pred hccCCceEEEecCCCccccCccccccccccccccchhHHHHhHHHHHHHcCCCCCCCCeEEEEeccCccccCHHHHHHHH
Confidence 2 789999999999988765321 011223567899999986 678999999999999999999999
Q ss_pred HHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEE-EecCCCC-hHHHHhcCCEEEEcCCCCCCC
Q 011954 293 YESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVH-FVNKTLT-VSPYLASIDVLVQNSQARGEC 370 (474)
Q Consensus 293 ~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~-~~g~~~~-~~~~~~~adv~v~ps~~~~E~ 370 (474)
+.+.+ ++++|+|+|+|+. ++.+.+++++++++ ++|+ |.|+.++ +..+|+.||++|+||. .|+
T Consensus 315 ~~l~~---------~~~~l~ivG~g~~---~~~~~l~~~~~~~~--~~v~~~~g~~~~~~~~~~~~adv~v~pS~--~E~ 378 (485)
T 2qzs_A 315 PGLLE---------QGGQLALLGAGDP---VLQEGFLAAAAEYP--GQVGVQIGYHEAFSHRIMGGADVILVPSR--FEP 378 (485)
T ss_dssp HHHHH---------TTCEEEEEEEECH---HHHHHHHHHHHHST--TTEEEEESCCHHHHHHHHHHCSEEEECCS--CCS
T ss_pred HHHhh---------CCcEEEEEeCCch---HHHHHHHHHHHhCC--CcEEEeCCCCHHHHHHHHHhCCEEEECCc--cCC
Confidence 98865 6899999999851 26788999999886 6786 8898644 5899999999999999 899
Q ss_pred CchHHHHHHhcCCCEEEcCCCCcceeeeeC---------CceeeecCCCCChHHHHHHHHHHh---hCHHHHHHHHHHHH
Q 011954 371 FGRITIEAMAFQLPVLGTAAGGTMEIVVNG---------TTGLLHPTGKEGVTPLANNIVKLA---THVERRLTMGKKGY 438 (474)
Q Consensus 371 ~~~~~~EAma~G~PvI~s~~~g~~e~v~~~---------~~G~l~~~~d~~~~~la~~i~~ll---~~~~~~~~~~~~~~ 438 (474)
||++++|||+||+|||+|++||+.|++.++ .+|++++++| +++|+++|.+++ +|++.+++|+++++
T Consensus 379 ~g~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~~~~d--~~~la~~i~~ll~~~~~~~~~~~~~~~~~ 456 (485)
T 2qzs_A 379 CGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASGFVFEDSN--AWSLLRAIRRAFVLWSRPSLWRFVQRQAM 456 (485)
T ss_dssp SCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEECSSS--HHHHHHHHHHHHHHHTSHHHHHHHHHHHH
T ss_pred CcHHHHHHHHCCCCEEECCCCCccceeccCccccccccccceEEECCCC--HHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 999999999999999999999999999988 8999999998 999999999999 79999999999987
Q ss_pred HHHHHhcCHHHHHHHHHHHHHHHHhhhh
Q 011954 439 ERVKDRFLEHHMSQRIALVLREVLQYAK 466 (474)
Q Consensus 439 ~~~~~~fs~~~~~~~~~~~~~~~~~~~~ 466 (474)
+ ++|||+.++++|+++|++++....
T Consensus 457 ~---~~fs~~~~~~~~~~ly~~~~~~~~ 481 (485)
T 2qzs_A 457 A---MDFSWQVAAKSYRELYYRLKLEHH 481 (485)
T ss_dssp H---CCCCHHHHHHHHHHHHHHHC----
T ss_pred h---hcCCHHHHHHHHHHHHHHhhhhhc
Confidence 4 779999999999999999976543
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-44 Score=348.47 Aligned_cols=348 Identities=16% Similarity=0.102 Sum_probs=263.1
Q ss_pred CEEEEEecCCC-CCChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhcccchhccceeeee---------------
Q 011954 75 KLVLLVSHELS-LSGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEHKMLDRGVQVLS--------------- 138 (474)
Q Consensus 75 ~kIl~v~~~~~-~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 138 (474)
|||+++++.+. .||+++++.+++++|+++||+|++++......... ++.+..
T Consensus 1 MkIl~i~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~------------~~~v~~~~~~~~~~~~~~~~~ 68 (374)
T 2iw1_A 1 MIVAFCLYKYFPFGGLQRDFMRIASTVAARGHHVRVYTQSWEGDCPK------------AFELIQVPVKSHTNHGRNAEY 68 (374)
T ss_dssp -CEEEECSEECTTCHHHHHHHHHHHHHHHTTCCEEEEESEECSCCCT------------TCEEEECCCCCSSHHHHHHHH
T ss_pred CeEEEEEeecCCCcchhhHHHHHHHHHHhCCCeEEEEecCCCCCCCC------------CcEEEEEccCcccchhhHHHH
Confidence 68999998754 47889999999999999999999999653221110 111111
Q ss_pred hhcHHHHhhhcCCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccccchh-hhhh-----cc--cccccccccc
Q 011954 139 AKGEKAINTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYFKL-EYVK-----HL--PFVAGAMIDS 210 (474)
Q Consensus 139 ~~~~~~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~-~~~~-----~~--~~~~~~~~~s 210 (474)
......+.+..+||+||+|+...+........ ....+.+++.|......... .... .+ ...+.+++.|
T Consensus 69 ~~~l~~~i~~~~~Dvv~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s 144 (374)
T 2iw1_A 69 YAWVQNHLKEHPADRVVGFNKMPGLDVYFAAD----VCYAEKVAQEKGFLYRLTSRYRHYAAFERATFEQGKSTKLMMLT 144 (374)
T ss_dssp HHHHHHHHHHSCCSEEEESSCCTTCSEEECCS----CCHHHHHHHHCCHHHHTSHHHHHHHHHHHHHHSTTCCCEEEESC
T ss_pred HHHHHHHHhccCCCEEEEecCCCCceeeeccc----cccceeeeecccchhhhcHHHHHHHHHHHHHhhccCCcEEEEcC
Confidence 11234455668999999997544321111000 01122333334322111110 1111 11 1345555555
Q ss_pred cccHHHHHHhHHHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHHHHH
Q 011954 211 YTTAEYWKNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLH 290 (474)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~ 290 (474)
... .+.+.+.+|++..++.+||||+|.+.|.+..... .+..+++++++++++++++++||+.+.||++.+++
T Consensus 145 ~~~----~~~~~~~~~~~~~~~~vi~ngv~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~ 216 (374)
T 2iw1_A 145 DKQ----IADFQKHYQTEPERFQILPPGIYPDRKYSEQIPN----SREIYRQKNGIKEQQNLLLQVGSDFGRKGVDRSIE 216 (374)
T ss_dssp HHH----HHHHHHHHCCCGGGEEECCCCCCGGGSGGGSCTT----HHHHHHHHTTCCTTCEEEEEECSCTTTTTHHHHHH
T ss_pred HHH----HHHHHHHhCCChhheEEecCCcCHHhcCcccchh----HHHHHHHHhCCCCCCeEEEEeccchhhcCHHHHHH
Confidence 544 4445556788888999999999999887654321 14678899999889999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCCCChHHHHhcCCEEEEcCCCCCCC
Q 011954 291 SFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYLASIDVLVQNSQARGEC 370 (474)
Q Consensus 291 a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv~v~ps~~~~E~ 370 (474)
|+..+.+.. .++++|+|+|+|+ .+.++++++++++.++|+|+|+.+++.++|+.||++|+||. .|+
T Consensus 217 a~~~l~~~~------~~~~~l~i~G~g~------~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~~v~ps~--~e~ 282 (374)
T 2iw1_A 217 ALASLPESL------RHNTLLFVVGQDK------PRKFEALAEKLGVRSNVHFFSGRNDVSELMAAADLLLHPAY--QEA 282 (374)
T ss_dssp HHHTSCHHH------HHTEEEEEESSSC------CHHHHHHHHHHTCGGGEEEESCCSCHHHHHHHCSEEEECCS--CCS
T ss_pred HHHHhHhcc------CCceEEEEEcCCC------HHHHHHHHHHcCCCCcEEECCCcccHHHHHHhcCEEEeccc--cCC
Confidence 999875521 2689999999984 36788999999999999999999999999999999999998 899
Q ss_pred CchHHHHHHhcCCCEEEcCCCCcceeeeeCCceeeec-CCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHH
Q 011954 371 FGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHP-TGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRFLEHH 449 (474)
Q Consensus 371 ~~~~~~EAma~G~PvI~s~~~g~~e~v~~~~~G~l~~-~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~fs~~~ 449 (474)
||++++|||+||+|||+++.||..|++.++.+|++++ ++| +++++++|.++++|++.+++|++++++.+.+ |+|+.
T Consensus 283 ~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~~~--~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~-~~~~~ 359 (374)
T 2iw1_A 283 AGIVLLEAITAGLPVLTTAVCGYAHYIADANCGTVIAEPFS--QEQLNEVLRKALTQSPLRMAWAENARHYADT-QDLYS 359 (374)
T ss_dssp SCHHHHHHHHHTCCEEEETTSTTTHHHHHHTCEEEECSSCC--HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH-SCCSC
T ss_pred cccHHHHHHHCCCCEEEecCCCchhhhccCCceEEeCCCCC--HHHHHHHHHHHHcChHHHHHHHHHHHHHHHH-hhHHH
Confidence 9999999999999999999999999999999999998 778 9999999999999999999999999999886 79999
Q ss_pred HHHHHHHHHHHHHh
Q 011954 450 MSQRIALVLREVLQ 463 (474)
Q Consensus 450 ~~~~~~~~~~~~~~ 463 (474)
+++++.++++..++
T Consensus 360 ~~~~~~~~l~~~l~ 373 (374)
T 2iw1_A 360 LPEKAADIITGGLD 373 (374)
T ss_dssp HHHHHHHHHHCC--
T ss_pred HHHHHHHHHHHhhc
Confidence 99999999987553
|
| >3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-43 Score=351.72 Aligned_cols=366 Identities=19% Similarity=0.161 Sum_probs=253.0
Q ss_pred ccCEEEEEecCCCC----CChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhh----hcc-----c-----chhccce
Q 011954 73 KSKLVLLVSHELSL----SGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIY----SLE-----H-----KMLDRGV 134 (474)
Q Consensus 73 ~~~kIl~v~~~~~~----gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~----~~~-----~-----~~~~~~~ 134 (474)
..|||||++.+..| ||...++..|.++|+++||+|.|+++.++........ .+. . .....|+
T Consensus 8 ~~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv 87 (536)
T 3vue_A 8 HHMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPRYDQYKDAWDTSVVAEIKVADRYERVRFFHCYKRGV 87 (536)
T ss_dssp CCCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCSCCTTCEEEEEEEEEEETTEEEEEEEEECEETTE
T ss_pred CCcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeEEEEecCchhhhhhcccceEEEEEecCceEEEEEEEEEECCc
Confidence 36999999988655 7778999999999999999999999765432210000 000 0 0001111
Q ss_pred eeeeh----------------------------hcHH---------HHhh-------------hcCCCEEEEcccchhhH
Q 011954 135 QVLSA----------------------------KGEK---------AINT-------------ALNADLVVLNTAVAGKW 164 (474)
Q Consensus 135 ~~~~~----------------------------~~~~---------~~~~-------------~~~~DiV~~~~~~~~~~ 164 (474)
.++.. ...+ .+.. ...+||+|+|+..++..
T Consensus 88 ~~y~id~~~~~~r~~~~~~~~~Y~~~~~~~~~d~~~rf~~f~~a~l~~~~~l~~~~~~~~~~~~~~ddIiH~hDW~t~l~ 167 (536)
T 3vue_A 88 DRVFIDHPSFLEKVWGKTGEKIYGPDTGVDYKDNQMRFSLLCQAALEAPRILNLNNNPYFKGTYGEDVVFVCNDWHTGPL 167 (536)
T ss_dssp EEEEEECTTTTCC------------------CHHHHHHHHHHHHHHHHHHHCCCCCCTTCCSCCCSCEEEEEESGGGSTH
T ss_pred eEEEecChhhhccccccCCCcccCCCccCccchHHHHHHHHHHHHHHHHHHhccccchhhhccCCCCEEEEECcchHHHH
Confidence 11100 0000 0000 13467888998655543
Q ss_pred HhHHhhhcc---cccccceeeeeeccccccc-h----------h----------------------hhhhcccccccccc
Q 011954 165 LDGVLKDKV---SQVLPKVLWWIHEMRGHYF-K----------L----------------------EYVKHLPFVAGAMI 208 (474)
Q Consensus 165 ~~~~~~~~~---~~~~~~~v~~~h~~~~~~~-~----------~----------------------~~~~~~~~~~~~~~ 208 (474)
...+..... .....++++|+|++..... . . .....+..++.+++
T Consensus 168 ~~~l~~~~~~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~k~~i~~ad~v~t 247 (536)
T 3vue_A 168 ASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVEGRKINWMKAGILEADRVLT 247 (536)
T ss_dssp HHHHHHHTTTTTSSTTCEEEEEESCTTCCCEEEGGGGGGGCCCGGGHHHHEEEETTTSTTCEEEEEHHHHHHHHCSEEEE
T ss_pred HHHHHHhhhhhhhhcccceeeeecCcccccccchhhhhhcCCchhhcchhhhhhcccccccccchhHHHHHHHhccEEEE
Confidence 322221111 1124689999997532110 0 0 00111234455666
Q ss_pred cccccHHHHHHhHHHHhc--------CCCCCeEEEeCCCCccccchhhh------------hHHHHHhHHHHHHhcCCC-
Q 011954 209 DSYTTAEYWKNRTRERLG--------IRMPETYVVHLGNSKDLMDIAED------------SVARRVLREHVRESLGVR- 267 (474)
Q Consensus 209 ~s~~~~~~~~~~~~~~~~--------~~~~ki~vi~ngvd~~~~~~~~~------------~~~~~~~~~~~r~~~~~~- 267 (474)
+|....+.+ ...++ ....++.+|+||||.+.|.|..+ ...+...+..+++.+|++
T Consensus 248 VS~~~a~ei----~~~~~~g~~l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~~~~~~K~~~k~~l~~~~gl~~ 323 (536)
T 3vue_A 248 VSPYYAEEL----ISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNKEALQAEAGLPV 323 (536)
T ss_dssp SCHHHHHHH----HTTCCCCSSSCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTTTHHHHHHHHHHHHHHHTTSCC
T ss_pred cCHHHhhhh----hcccccccccccccccCCeEEEECCcchhhcCCCCccccccccchhhhhhhhHHHHHHHHHhcCCCC
Confidence 665554443 33332 23568999999999999987532 123345567888899886
Q ss_pred -CCCEEEEEecccccCcchHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecC
Q 011954 268 -DDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNK 346 (474)
Q Consensus 268 -~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~ 346 (474)
++.++|+++||+.++||++.+++|+.++.+ .+.+|+|+|.|.. +....++.....++ +++.+.+.
T Consensus 324 d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~---------~~~~l~l~G~G~~---~~~~~~~~~~~~~~--~~v~~~~~ 389 (536)
T 3vue_A 324 DRKIPLIAFIGRLEEQKGPDVMAAAIPELMQ---------EDVQIVLLGTGKK---KFEKLLKSMEEKYP--GKVRAVVK 389 (536)
T ss_dssp CTTSCEEEEECCBSGGGCHHHHHHHHHHHTT---------SSCEEEEECCBCH---HHHHHHHHHHHHST--TTEEEECS
T ss_pred CCCCcEEEEEeeccccCChHHHHHHHHHhHh---------hCCeEEEEeccCc---hHHHHHHHHHhhcC--CceEEEEe
Confidence 455899999999999999999999998854 6789999998852 24555666666654 57888875
Q ss_pred C--CChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCcceeeeeCCcee----------eecCCCCChH
Q 011954 347 T--LTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGL----------LHPTGKEGVT 414 (474)
Q Consensus 347 ~--~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~~e~v~~~~~G~----------l~~~~d~~~~ 414 (474)
. +++..+|+.||++|+||+ .|+||++++|||+||+|||+|++||++|+|.|+++|+ ++++.| ++
T Consensus 390 ~~~~~~~~~~~~aD~~v~PS~--~E~fgl~~lEAma~G~PvI~s~~gG~~e~V~dg~~G~~~~~~~~~g~l~~~~d--~~ 465 (536)
T 3vue_A 390 FNAPLAHLIMAGADVLAVPSR--FEPCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHMGRLSVDCKVVEPSD--VK 465 (536)
T ss_dssp CCHHHHHHHHHHCSEEEECCS--CCSSCSHHHHHHHTTCCEEECSCTHHHHHCCBTTTEEECCCCCSCTTCCCHHH--HH
T ss_pred ccHHHHHHHHHhhheeecccc--cCCCCHHHHHHHHcCCCEEEcCCCCchheeeCCCCccccccCCCceeEECCCC--HH
Confidence 4 668889999999999999 8999999999999999999999999999999999998 666667 99
Q ss_pred HHHHHHHHHhh--CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Q 011954 415 PLANNIVKLAT--HVERRLTMGKKGYERVKDRFLEHHMSQRIALVLREVLQ 463 (474)
Q Consensus 415 ~la~~i~~ll~--~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~ 463 (474)
+|+++|.++++ +.+.+++|.+++ +.++|||++++++|+++|+++..
T Consensus 466 ~la~ai~ral~~~~~~~~~~~~~~a---m~~~fSW~~~A~~y~~ly~~L~~ 513 (536)
T 3vue_A 466 KVAATLKRAIKVVGTPAYEEMVRNC---MNQDLSWKGPAKNWENVLLGLGV 513 (536)
T ss_dssp HHHHHHHHHHHHTTSHHHHHHHHHH---HHSCCSSHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHhcCcHHHHHHHHHH---HHhcCCHHHHHHHHHHHHHHhhh
Confidence 99999998876 545577776665 45789999999999999999743
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-42 Score=338.08 Aligned_cols=351 Identities=18% Similarity=0.176 Sum_probs=261.0
Q ss_pred ccCEEEEEecCCCC--CChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhcccchhc----cce-ee-e---ehhc
Q 011954 73 KSKLVLLVSHELSL--SGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEHKMLD----RGV-QV-L---SAKG 141 (474)
Q Consensus 73 ~~~kIl~v~~~~~~--gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~----~~~-~~-~---~~~~ 141 (474)
+||||+++++.+++ ||+++++.+++++|.+.||+|++++.................+.. ... .. + ....
T Consensus 19 ~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (406)
T 2gek_A 19 SHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDYVVSGGKAVPIPYNGSVARLRFGPATHRK 98 (406)
T ss_dssp --CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCCCTTEEECCCCC------------CCHHHHHH
T ss_pred CcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCccccCCcccccCCcEEeccccCCcccccccHHHHHH
Confidence 47899999987644 777899999999999999999999966543210000000000000 000 00 0 0123
Q ss_pred HHHHhhhcCCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccccch-hhhh----hcccccccccccccccHHH
Q 011954 142 EKAINTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYFK-LEYV----KHLPFVAGAMIDSYTTAEY 216 (474)
Q Consensus 142 ~~~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~-~~~~----~~~~~~~~~~~~s~~~~~~ 216 (474)
+..+.+..+||+||+|......+...+... ...|+++++|+....... ..+. ..++.++.+++.+....+.
T Consensus 99 l~~~l~~~~~Dii~~~~~~~~~~~~~~~~~----~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~ 174 (406)
T 2gek_A 99 VKKWIAEGDFDVLHIHEPNAPSLSMLALQA----AEGPIVATFHTSTTKSLTLSVFQGILRPYHEKIIGRIAVSDLARRW 174 (406)
T ss_dssp HHHHHHHHCCSEEEEECCCSSSHHHHHHHH----EESSEEEEECCCCCSHHHHHHHHSTTHHHHTTCSEEEESSHHHHHH
T ss_pred HHHHHHhcCCCEEEECCccchHHHHHHHHh----cCCCEEEEEcCcchhhhhHHHHHHHHHHHHhhCCEEEECCHHHHHH
Confidence 445566679999999986554432222211 236889999985432211 1111 2335556666666555554
Q ss_pred HHHhHHHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEeccc-ccCcchHHHHHHHHHH
Q 011954 217 WKNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSV-SRGKGQDLFLHSFYES 295 (474)
Q Consensus 217 ~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl-~~~Kg~~~ll~a~~~l 295 (474)
+. +.++ ..++ +||||+|.+.+.+.... .+++.++++++++|++ .+.||++.+++|+.++
T Consensus 175 ~~----~~~~--~~~~-vi~~~v~~~~~~~~~~~-------------~~~~~~~~~i~~~G~~~~~~Kg~~~li~a~~~l 234 (406)
T 2gek_A 175 QM----EALG--SDAV-EIPNGVDVASFADAPLL-------------DGYPREGRTVLFLGRYDEPRKGMAVLLAALPKL 234 (406)
T ss_dssp HH----HHHS--SCEE-ECCCCBCHHHHHTCCCC-------------TTCSCSSCEEEEESCTTSGGGCHHHHHHHHHHH
T ss_pred HH----HhcC--CCcE-EecCCCChhhcCCCchh-------------hhccCCCeEEEEEeeeCccccCHHHHHHHHHHH
Confidence 43 3444 4578 99999998877654311 1233456799999999 9999999999999988
Q ss_pred HHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCC--CChHHHHhcCCEEEEcCCCCCCCCch
Q 011954 296 LQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKT--LTVSPYLASIDVLVQNSQARGECFGR 373 (474)
Q Consensus 296 ~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~--~~~~~~~~~adv~v~ps~~~~E~~~~ 373 (474)
.+ ++++++|+|+|+|+ . +.++++++++ .++|+|+|++ +++.++|+.||++|+||.+ .|++|+
T Consensus 235 ~~-------~~~~~~l~i~G~~~-----~-~~l~~~~~~~--~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~-~e~~~~ 298 (406)
T 2gek_A 235 VA-------RFPDVEILIVGRGD-----E-DELREQAGDL--AGHLRFLGQVDDATKASAMRSADVYCAPHLG-GESFGI 298 (406)
T ss_dssp HT-------TSTTCEEEEESCSC-----H-HHHHHHTGGG--GGGEEECCSCCHHHHHHHHHHSSEEEECCCS-CCSSCH
T ss_pred HH-------HCCCeEEEEEcCCc-----H-HHHHHHHHhc--cCcEEEEecCCHHHHHHHHHHCCEEEecCCC-CCCCch
Confidence 65 55899999999996 5 7888888777 5799999987 5569999999999999853 899999
Q ss_pred HHHHHHhcCCCEEEcCCCCcceeeeeCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHH
Q 011954 374 ITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRFLEHHMSQR 453 (474)
Q Consensus 374 ~~~EAma~G~PvI~s~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~fs~~~~~~~ 453 (474)
+++|||+||+|||+++.||..|++.++.+|++++++| +++++++|.++++|++.+.++++++++++. .|+|+.++++
T Consensus 299 ~~~Ea~a~G~PvI~~~~~~~~e~i~~~~~g~~~~~~d--~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~-~~s~~~~~~~ 375 (406)
T 2gek_A 299 VLVEAMAAGTAVVASDLDAFRRVLADGDAGRLVPVDD--ADGMAAALIGILEDDQLRAGYVARASERVH-RYDWSVVSAQ 375 (406)
T ss_dssp HHHHHHHHTCEEEECCCHHHHHHHTTTTSSEECCTTC--HHHHHHHHHHHHHCHHHHHHHHHHHHHHGG-GGBHHHHHHH
T ss_pred HHHHHHHcCCCEEEecCCcHHHHhcCCCceEEeCCCC--HHHHHHHHHHHHcCHHHHHHHHHHHHHHHH-hCCHHHHHHH
Confidence 9999999999999999999999999899999999988 999999999999999999999999999998 8999999999
Q ss_pred HHHHHHHHHhhhh
Q 011954 454 IALVLREVLQYAK 466 (474)
Q Consensus 454 ~~~~~~~~~~~~~ 466 (474)
+.++|+++++++.
T Consensus 376 ~~~~~~~~~~~~~ 388 (406)
T 2gek_A 376 IMRVYETVSGAGI 388 (406)
T ss_dssp HHHHHHHHCCTTC
T ss_pred HHHHHHHHHhhcc
Confidence 9999999987654
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-42 Score=332.27 Aligned_cols=308 Identities=16% Similarity=0.069 Sum_probs=245.0
Q ss_pred cccCEEEEEecC-----------CC---CCChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhcccchhccceeee
Q 011954 72 MKSKLVLLVSHE-----------LS---LSGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEHKMLDRGVQVL 137 (474)
Q Consensus 72 ~~~~kIl~v~~~-----------~~---~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (474)
|++|||+++++. ++ .||+++++.+++++|.+.||+|++++........ .++.++
T Consensus 1 M~~mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~~G~~v~v~~~~~~~~~~------------~~~~~~ 68 (342)
T 2iuy_A 1 MRPLKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLELGHEVFLLGAPGSPAGR------------PGLTVV 68 (342)
T ss_dssp --CCEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHTTCEEEEESCTTSCCCS------------TTEEEC
T ss_pred CCccEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHHcCCeEEEEecCCCCCCC------------Ccceec
Confidence 667999999987 22 2777899999999999999999999976543221 122222
Q ss_pred eh---hcHHHHhhhcCCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccccchhhhhhcccccccccccccccH
Q 011954 138 SA---KGEKAINTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYFKLEYVKHLPFVAGAMIDSYTTA 214 (474)
Q Consensus 138 ~~---~~~~~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 214 (474)
.. ..+..+.+..+||+||+|+.....+. ......| ++++|+...... ..+.+++.|....
T Consensus 69 ~~~~~~~l~~~l~~~~~Dvi~~~~~~~~~~~-------~~~~~~p-v~~~h~~~~~~~---------~~d~ii~~S~~~~ 131 (342)
T 2iuy_A 69 PAGEPEEIERWLRTADVDVVHDHSGGVIGPA-------GLPPGTA-FISSHHFTTRPV---------NPVGCTYSSRAQR 131 (342)
T ss_dssp SCCSHHHHHHHHHHCCCSEEEECSSSSSCST-------TCCTTCE-EEEEECSSSBCS---------CCTTEEESCHHHH
T ss_pred cCCcHHHHHHHHHhcCCCEEEECCchhhHHH-------HhhcCCC-EEEecCCCCCcc---------cceEEEEcCHHHH
Confidence 21 24556666789999999986654322 1123457 899998744321 1566666666655
Q ss_pred HHHHHhHHHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHHHHHHHHH
Q 011954 215 EYWKNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYE 294 (474)
Q Consensus 215 ~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~ 294 (474)
+.+.+ ..++.+||||+|.+.+.+.... . .+..+|+++||+.+.||++.+++|++.
T Consensus 132 ~~~~~---------~~~~~vi~ngvd~~~~~~~~~~---------------~-~~~~~i~~vG~~~~~Kg~~~li~a~~~ 186 (342)
T 2iuy_A 132 AHCGG---------GDDAPVIPIPVDPARYRSAADQ---------------V-AKEDFLLFMGRVSPHKGALEAAAFAHA 186 (342)
T ss_dssp HHTTC---------CTTSCBCCCCBCGGGSCCSTTC---------------C-CCCSCEEEESCCCGGGTHHHHHHHHHH
T ss_pred HHHhc---------CCceEEEcCCCChhhcCccccc---------------C-CCCCEEEEEeccccccCHHHHHHHHHh
Confidence 54432 5789999999999988765321 1 345678999999999999999999986
Q ss_pred HHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCCC--ChHHHHhcCCEEEEcCC-------
Q 011954 295 SLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTL--TVSPYLASIDVLVQNSQ------- 365 (474)
Q Consensus 295 l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~--~~~~~~~~adv~v~ps~------- 365 (474)
+ +++|+|+|+|+ ..+.+++++++++ ++|+|+|+++ ++.++|+.||++|+||.
T Consensus 187 ~------------~~~l~i~G~g~-----~~~~l~~~~~~~~--~~v~~~g~~~~~~l~~~~~~adv~v~ps~~~~~~~~ 247 (342)
T 2iuy_A 187 C------------GRRLVLAGPAW-----EPEYFDEITRRYG--STVEPIGEVGGERRLDLLASAHAVLAMSQAVTGPWG 247 (342)
T ss_dssp H------------TCCEEEESCCC-----CHHHHHHHHHHHT--TTEEECCCCCHHHHHHHHHHCSEEEECCCCCCCTTC
T ss_pred c------------CcEEEEEeCcc-----cHHHHHHHHHHhC--CCEEEeccCCHHHHHHHHHhCCEEEECCcccccccc
Confidence 5 58999999996 6788888888887 7999999874 56999999999999997
Q ss_pred --CCCCCCchHHHHHHhcCCCEEEcCCCCcceeeee--CCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHH
Q 011954 366 --ARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVN--GTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERV 441 (474)
Q Consensus 366 --~~~E~~~~~~~EAma~G~PvI~s~~~g~~e~v~~--~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~ 441 (474)
| .|+||++++|||+||+|||+|+.||+.|++.+ +.+|+++++ | +++++++|.++++ ++++++++
T Consensus 248 ~~~-~E~~~~~~~EAma~G~PvI~s~~~~~~e~~~~~~~~~g~~~~~-d--~~~l~~~i~~l~~--------~~~~~~~~ 315 (342)
T 2iuy_A 248 GIW-CEPGATVVSEAAVSGTPVVGTGNGCLAEIVPSVGEVVGYGTDF-A--PDEARRTLAGLPA--------SDEVRRAA 315 (342)
T ss_dssp SCC-CCCCCHHHHHHHHTTCCEEECCTTTHHHHGGGGEEECCSSSCC-C--HHHHHHHHHTSCC--------HHHHHHHH
T ss_pred ccc-ccCccHHHHHHHhcCCCEEEcCCCChHHHhcccCCCceEEcCC-C--HHHHHHHHHHHHH--------HHHHHHHH
Confidence 4 79999999999999999999999999999998 889999999 8 9999999999986 67889999
Q ss_pred HHhcCHHHHHHHHHHHHHHHHhh
Q 011954 442 KDRFLEHHMSQRIALVLREVLQY 464 (474)
Q Consensus 442 ~~~fs~~~~~~~~~~~~~~~~~~ 464 (474)
.++|+|+.+++++.++|++++++
T Consensus 316 ~~~~s~~~~~~~~~~~~~~~~~~ 338 (342)
T 2iuy_A 316 VRLWGHVTIAERYVEQYRRLLAG 338 (342)
T ss_dssp HHHHBHHHHHHHHHHHHHHHHTT
T ss_pred HHhcCHHHHHHHHHHHHHHHHcc
Confidence 88899999999999999999875
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-41 Score=352.33 Aligned_cols=375 Identities=16% Similarity=0.196 Sum_probs=261.1
Q ss_pred ccCEEEEEecCCC---------C-CCh-hHHHHH--------HHHHHHhcCcEEE----EEeCCCCCCchh-hhhhcccc
Q 011954 73 KSKLVLLVSHELS---------L-SGG-PLLLME--------LAFLLRGVGAEVV----WITNQKPNEPDE-VIYSLEHK 128 (474)
Q Consensus 73 ~~~kIl~v~~~~~---------~-gG~-~~~~~~--------l~~~L~~~G~~V~----v~~~~~~~~~~~-~~~~~~~~ 128 (474)
|.++|++++.... + .|| ..++.+ |++.|.++||+|+ |+|...+..... ........
T Consensus 277 ~~~~i~~is~hg~~~~~~~lG~~dtGGq~vyV~e~~~al~~ela~~L~~~G~~V~~~V~v~Tr~~~~~~g~~y~~~~e~i 356 (816)
T 3s28_A 277 MVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALEIEMLQRIKQQGLNIKPRILILTRLLPDAVGTTCGERLERV 356 (816)
T ss_dssp CCCEEEEECCSSCCCSSSCTTSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECCTTCTTSSTTSSEEEC
T ss_pred ceeEEEEEcCCcccCccccCCCCCCCCceeeHHHHHHHHHHHHHHHHHHCCCccceeeEEEeCCCCCCCCCccCCcceee
Confidence 4689999998753 3 344 688874 6667778999876 898543322111 00001111
Q ss_pred hhccceeeeehh---------------------------cHHHHhh--hcCCCEEEEcccchhhHHhHHhhhcccccccc
Q 011954 129 MLDRGVQVLSAK---------------------------GEKAINT--ALNADLVVLNTAVAGKWLDGVLKDKVSQVLPK 179 (474)
Q Consensus 129 ~~~~~~~~~~~~---------------------------~~~~~~~--~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (474)
-...++.+++.+ ....+.. ..+||+||+|....+.... .+... ...|
T Consensus 357 ~~~~gv~I~RvP~~~~~g~l~~~l~k~~L~~~L~~F~~~~l~~il~~~~~~PDVIHsH~~~sglva~-llar~---~gvP 432 (816)
T 3s28_A 357 YDSEYCDILRVPFRTEKGIVRKWISRFEVWPYLETYTEDAAVELSKELNGKPDLIIGNYSDGNLVAS-LLAHK---LGVT 432 (816)
T ss_dssp TTCSSEEEEEECEEETTEEECSCCCTTTCGGGHHHHHHHHHHHHHHHCSSCCSEEEEEHHHHHHHHH-HHHHH---HTCC
T ss_pred cCcCCeEEEEecCCCccccccccccHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEeCCchHHHHHH-HHHHH---cCCC
Confidence 001133332111 0111111 2479999999755444322 22221 2458
Q ss_pred eeeeeeccccccch-------h---h---------hhhcccccccccccccccHHHHHHh---HHHH-------------
Q 011954 180 VLWWIHEMRGHYFK-------L---E---------YVKHLPFVAGAMIDSYTTAEYWKNR---TRER------------- 224 (474)
Q Consensus 180 ~v~~~h~~~~~~~~-------~---~---------~~~~~~~~~~~~~~s~~~~~~~~~~---~~~~------------- 224 (474)
++++.|........ . . ....+..++.+++.|....+.+.+. +...
T Consensus 433 ~V~T~Hsl~~~k~~~~~~~~~~~~~~y~~~~r~~aE~~~l~~AD~VIa~S~~~~~~l~~~~~~y~~~~~~~~p~Lyr~~~ 512 (816)
T 3s28_A 433 QCTIAHALEKTKYPDSDIYWKKLDDKYHFSCQFTADIFAMNHTDFIITSTFQEIAGSKETVGQYESHTAFTLPGLYRVVH 512 (816)
T ss_dssp EEEECSCCHHHHSTTTTTTHHHHHHHHCHHHHHHHHHHHHHHSSEEEESCHHHHHCCSSSCCTTGGGSSEEETTTEEEEE
T ss_pred EEEEEecccccccccccchhhhHHHHHHHHHHHHHHHHHHHhCCEEEECCHHHHHHHHHHHHHhhhhhccccchhhhccc
Confidence 89999975321110 0 0 0113456666777666555421110 0000
Q ss_pred -hcCCCCCeEEEeCCCCccccchhhhhHH------HHH-----hHHHHHHhcCC--CCCCEEEEEecccccCcchHHHHH
Q 011954 225 -LGIRMPETYVVHLGNSKDLMDIAEDSVA------RRV-----LREHVRESLGV--RDDDLLFAIINSVSRGKGQDLFLH 290 (474)
Q Consensus 225 -~~~~~~ki~vi~ngvd~~~~~~~~~~~~------~~~-----~~~~~r~~~~~--~~~~~~i~~vgrl~~~Kg~~~ll~ 290 (474)
.+...+++.|||||+|.+.|.+...... ... .....++.+|+ +.++++|+++||+.+.||++.+++
T Consensus 513 gI~~~~~ki~VIpnGVD~~~F~P~~~~~~Rl~~~~~~i~~~l~~p~~~r~~lg~l~~~~~~vIl~vGRl~~~KGid~LIe 592 (816)
T 3s28_A 513 GIDVFDPKFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVENKEHLCVLKDKKKPILFTMARLDRVKNLSGLVE 592 (816)
T ss_dssp SCCTTCTTEEECCCCCCTTTSCCTTCTTTCCGGGHHHHHHHHHCSCCBTTEESCBSCTTSCEEEEECCCCTTTTHHHHHH
T ss_pred ccccCCCCEEEECCCcCHHHcCccchhhhhhhhccccccccccchhhHHHHhcccCCCCCeEEEEEccCcccCCHHHHHH
Confidence 0122348999999999999977542210 000 00123455666 677899999999999999999999
Q ss_pred HHHHHHHHHHHhccCCCcEEEEEEcCCCCc------CchHHHHHHHHHHHcCCCCeEEEecCC------CChHHHHh-cC
Q 011954 291 SFYESLQLIREKKLQVPSMHAVVVGSDMNA------QTKFETELRNFVAEKKIQDHVHFVNKT------LTVSPYLA-SI 357 (474)
Q Consensus 291 a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~------~~~~~~~l~~~~~~~~l~~~v~~~g~~------~~~~~~~~-~a 357 (474)
|+.++.+. .++++|+|+|+|++. ..++.+.++++++++++.++|.|+|++ +++..+|+ .+
T Consensus 593 A~~~L~~~-------~~~v~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~flG~~~~~v~~~eL~~~~~~aa 665 (816)
T 3s28_A 593 WYGKNTRL-------RELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYICDTK 665 (816)
T ss_dssp HHHHCHHH-------HHHCEEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEECCCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHhh-------CCCeEEEEEeCCCcccccchhhHHHHHHHHHHHHHcCCCCcEEEccCccccCCHHHHHHHHHhcC
Confidence 99988652 268999999998621 112578899999999999999999965 44778887 68
Q ss_pred CEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCcceeeeeCCceeeecCCCCChHHHHHHHHHHh----hCHHHHHHH
Q 011954 358 DVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLA----THVERRLTM 433 (474)
Q Consensus 358 dv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll----~~~~~~~~~ 433 (474)
|++|+||. .|+||++++||||||+|||+|+.||+.|++.++.+|++++++| +++++++|.+++ .|++.+++|
T Consensus 666 DvfV~PS~--~EgfglvllEAMA~G~PVIasd~GG~~EiV~dg~~Gllv~p~D--~e~LA~aI~~lL~~Ll~d~~~~~~m 741 (816)
T 3s28_A 666 GAFVQPAL--YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVHGKSGFHIDPYH--GDQAADTLADFFTKCKEDPSHWDEI 741 (816)
T ss_dssp CEEEECCS--CBSSCHHHHHHHHTTCCEEEESSBTHHHHCCBTTTBEEECTTS--HHHHHHHHHHHHHHHHHCTHHHHHH
T ss_pred eEEEECCC--ccCccHHHHHHHHcCCCEEEeCCCChHHHHccCCcEEEeCCCC--HHHHHHHHHHHHHHhccCHHHHHHH
Confidence 99999999 8999999999999999999999999999999999999999999 999999997766 899999999
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 011954 434 GKKGYERVKDRFLEHHMSQRIALVLREVL 462 (474)
Q Consensus 434 ~~~~~~~~~~~fs~~~~~~~~~~~~~~~~ 462 (474)
++++++++.++|||+.++++++++|+..-
T Consensus 742 ~~~ar~~a~~~fSwe~~a~~ll~lY~~~g 770 (816)
T 3s28_A 742 SKGGLQRIEEKYTWQIYSQRLLTLTGVYG 770 (816)
T ss_dssp HHHHHHHHHHSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999764
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-39 Score=312.18 Aligned_cols=340 Identities=11% Similarity=0.088 Sum_probs=222.6
Q ss_pred ccCEEEEEecCCCCC---ChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhccc----chhcc-c--eeeeehh-c
Q 011954 73 KSKLVLLVSHELSLS---GGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEH----KMLDR-G--VQVLSAK-G 141 (474)
Q Consensus 73 ~~~kIl~v~~~~~~g---G~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~----~~~~~-~--~~~~~~~-~ 141 (474)
.+|||+++++.+.++ ||.+.+.+++++|.++||+|+|++....... .....+.. .+... . ..+.... .
T Consensus 45 ~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~GheV~Vvt~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 123 (413)
T 2x0d_A 45 KGKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTDATPNP-KDLQSFKSFKYVMPEEDKDFALQIVPFNDR 123 (413)
T ss_dssp CSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCEEEEEESSCCCCH-HHHGGGTTSEECCTTCCCCCSEEEEECSCC
T ss_pred CCceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCceEEEEecCCCCh-HHHHhhhccceeeccCCccccceeeecccc
Confidence 468999999998885 7777899999999999999999997543211 11110100 00000 0 0111111 0
Q ss_pred HHHHhhhcCCCEEEEcccchhhHHhHHhhh---cccccccceeeeeeccccccchhhh-----hhcccccc--ccccccc
Q 011954 142 EKAINTALNADLVVLNTAVAGKWLDGVLKD---KVSQVLPKVLWWIHEMRGHYFKLEY-----VKHLPFVA--GAMIDSY 211 (474)
Q Consensus 142 ~~~~~~~~~~DiV~~~~~~~~~~~~~~~~~---~~~~~~~~~v~~~h~~~~~~~~~~~-----~~~~~~~~--~~~~~s~ 211 (474)
........++|+||++....+......... .......+.++.+|+....+..... ...+...+ .++++|.
T Consensus 124 ~~~~~~~~~~Dvv~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~S~ 203 (413)
T 2x0d_A 124 YNRTIPVAKHDIFIATAWWTAYAAQRIVSWQSDTYGIPPNKILYIIQDFEPGFYQWSSQYVLAESTYKYRGPQIAVFNSE 203 (413)
T ss_dssp TTCCEEECTTEEEEECSHHHHHHHHHHHHHHHHHHTCCCCCEEEEECSCGGGGSCSSHHHHHHHHTTSCCSCEEEEEESH
T ss_pred ccccccCCCCCEEEEehHHHHHHHHHhhhhhhhhcccccCcEEEEEeechhhcCccChHHHHHHHHhccCCceEEEEcCH
Confidence 111112357999999975444333322110 0000123555666665433221111 11222222 1333444
Q ss_pred ccHHHHHHhHHHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEeccc-ccCcchHHHHH
Q 011954 212 TTAEYWKNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSV-SRGKGQDLFLH 290 (474)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl-~~~Kg~~~ll~ 290 (474)
. .++.+.+ .|++..++.+++||+|.+.|.+.. .+ ..+...++++||+ .+.||++.+++
T Consensus 204 ~----~~~~l~~-~g~~~~~~~~i~~g~d~~~~~~~~---------------~~-~~~~~~il~~gr~~~~~Kg~~~li~ 262 (413)
T 2x0d_A 204 L----LKQYFNN-KGYNFTDEYFFQPKINTTLKNYIN---------------DK-RQKEKIILVYGRPSVKRNAFTLIVE 262 (413)
T ss_dssp H----HHHHHHH-HTCCCSEEEEECCCCCHHHHTTTT---------------SC-CCCCSEEEEEECTTCGGGCHHHHHH
T ss_pred H----HHHHHHH-cCCCCCceEEeCCCcCchhhcccc---------------cc-cCCCCEEEEEecCchhccCHHHHHH
Confidence 4 4444433 466656799999999987654321 11 2345567789996 68899999999
Q ss_pred HHHHHHHHHHHhccCCC---cEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCC--CChHHHHhcCCEEEEcCC
Q 011954 291 SFYESLQLIREKKLQVP---SMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKT--LTVSPYLASIDVLVQNSQ 365 (474)
Q Consensus 291 a~~~l~~~~~~~~~~~~---~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~--~~~~~~~~~adv~v~ps~ 365 (474)
|++.+.+ ++| +++|+|+|+|+.. .++++.++|+|+|++ +++.++|+.||++|+||.
T Consensus 263 A~~~l~~-------~~~~~~~~~l~ivG~~~~~------------~~l~~~~~v~f~G~~~~~~l~~~~~~adv~v~pS~ 323 (413)
T 2x0d_A 263 ALKIFVQ-------KYDRSNEWKIISVGEKHKD------------IALGKGIHLNSLGKLTLEDYADLLKRSSIGISLMI 323 (413)
T ss_dssp HHHHHHH-------HCTTGGGCEEEEEESCCCC------------EEEETTEEEEEEESCCHHHHHHHHHHCCEEECCCS
T ss_pred HHHHHHH-------hCCCCCceEEEEEcCCchh------------hhcCCcCcEEEcCCCCHHHHHHHHHhCCEEEEecC
Confidence 9998865 235 4899999998621 346777899999985 789999999999999998
Q ss_pred CCCCCCchHHHHHHhcCCCEEEcCCCCcceeeeeCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhc
Q 011954 366 ARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRF 445 (474)
Q Consensus 366 ~~~E~~~~~~~EAma~G~PvI~s~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~f 445 (474)
.|+||++++||||||+|||++ .+|..|++.++.+|++++++| +++|+++|.++++|++++++ ++++.+ +.|
T Consensus 324 --~E~~g~~~lEAmA~G~PVV~~-~~g~~e~v~~~~~G~lv~~~d--~~~la~ai~~ll~~~~~~~~---~~~~~~-~~~ 394 (413)
T 2x0d_A 324 --SPHPSYPPLEMAHFGLRVITN-KYENKDLSNWHSNIVSLEQLN--PENIAETLVELCMSFNNRDV---DKKESS-NMM 394 (413)
T ss_dssp --SSSCCSHHHHHHHTTCEEEEE-CBTTBCGGGTBTTEEEESSCS--HHHHHHHHHHHHHHTC----------CCB-SCG
T ss_pred --CCCCCcHHHHHHhCCCcEEEe-CCCcchhhhcCCCEEEeCCCC--HHHHHHHHHHHHcCHHHHHH---hHHHHH-HhC
Confidence 899999999999999999995 567789999999999999999 99999999999998887776 566555 469
Q ss_pred CHHHHHHHHHHHHHHHHh
Q 011954 446 LEHHMSQRIALVLREVLQ 463 (474)
Q Consensus 446 s~~~~~~~~~~~~~~~~~ 463 (474)
+|+...++ .+.|+++++
T Consensus 395 ~W~~~~~~-~~~~~~l~~ 411 (413)
T 2x0d_A 395 FYINEFNE-FSFIKEIEE 411 (413)
T ss_dssp GGCCCC----TTHHHHHT
T ss_pred CHHHHHHH-HHHHHHHHh
Confidence 99999888 777777754
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-35 Score=302.72 Aligned_cols=333 Identities=11% Similarity=0.031 Sum_probs=242.4
Q ss_pred cccCEEEEEecCCCCCChhHHHHHHHHH--HHhcCcEEEEEeCCCCCCchhhhhhcccchhccceeee-----ehhcHHH
Q 011954 72 MKSKLVLLVSHELSLSGGPLLLMELAFL--LRGVGAEVVWITNQKPNEPDEVIYSLEHKMLDRGVQVL-----SAKGEKA 144 (474)
Q Consensus 72 ~~~~kIl~v~~~~~~gG~~~~~~~l~~~--L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 144 (474)
.++|||+++++.+..||+++++.++++. +.+.||+|++++...+... .... .+...+ .+. ....+..
T Consensus 203 ~~~~rI~~~~~~~~~~g~~~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~-~~~~----~~~~~~-~~~~~~~~~~~~l~~ 276 (568)
T 2vsy_A 203 KGPLRVGFVSNGFGAHPTGLLTVALFEALQRRQPDLQMHLFATSGDDGS-TLRT----RLAQAS-TLHDVTALGHLATAK 276 (568)
T ss_dssp SSCEEEEEEESCSSSSHHHHHHHHHHHHHHHHCTTEEEEEEESSCCCSC-HHHH----HHHHTS-EEEECTTCCHHHHHH
T ss_pred CCCeEEEEECcccccChHHHHHHHHHhhccCCcccEEEEEEECCCCCcc-HHHH----HHHhcC-eEEECCCCCHHHHHH
Confidence 3478999999999888889999999999 7889999999996432111 1111 111111 111 2234556
Q ss_pred HhhhcCCCEEEEcccchhh-HHhHHhhhcccccccceeeeeeccccccchhhhhhcccccccccccccccHHHHHHhHHH
Q 011954 145 INTALNADLVVLNTAVAGK-WLDGVLKDKVSQVLPKVLWWIHEMRGHYFKLEYVKHLPFVAGAMIDSYTTAEYWKNRTRE 223 (474)
Q Consensus 145 ~~~~~~~DiV~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 223 (474)
+.+..+|||||.++..... .+...... ..+++.+.|+...... .. ...+...+.+++.+.....
T Consensus 277 ~i~~~~~Div~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~-~~-~~~~~~~d~~i~~s~~~~~-------- 341 (568)
T 2vsy_A 277 HIRHHGIDLLFDLRGWGGGGRPEVFALR-----PAPVQVNWLAYPGTSG-AP-WMDYVLGDAFALPPALEPF-------- 341 (568)
T ss_dssp HHHHTTCSEEEECSSCTTCSSCHHHHTC-----CSSEEEEESSSSSCCC-CT-TCCEEEECTTTSCTTTGGG--------
T ss_pred HHHhCCCCEEEECCCCCCcchHHHHhcC-----CCceeEeeecCCcccC-CC-CceEEEECCCcCCcccccC--------
Confidence 6677899999987543211 11111111 1345555554311111 00 0011223444444443211
Q ss_pred HhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHHHHHHHHHHHHHHHHhc
Q 011954 224 RLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKK 303 (474)
Q Consensus 224 ~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~ 303 (474)
++ +++.+|||........+... +...|+++|++++.+++ ++||+.+ ||++.+++++.++.+
T Consensus 342 -~~---~~i~~ipn~~~~~~~~~~~~-------~~~~r~~~~~~~~~~v~-~~g~~~~-K~~~~li~a~~~l~~------ 402 (568)
T 2vsy_A 342 -YS---EHVLRLQGAFQPSDTSRVVA-------EPPSRTQCGLPEQGVVL-CCFNNSY-KLNPQSMARMLAVLR------ 402 (568)
T ss_dssp -CS---SEEEECSSCSCCCCTTCCCC-------CCCCTGGGTCCTTSCEE-EECCCGG-GCCHHHHHHHHHHHH------
T ss_pred -Cc---ceeEcCCCcCCCCCCCCCCC-------CCCCccccCCCCCCEEE-EeCCccc-cCCHHHHHHHHHHHH------
Confidence 22 67999999654332111100 12357778887776554 8999999 999999999999866
Q ss_pred cCCCcEEEEEEc-CCCCcCchHHHHHHHHHHHcCCC-CeEEEecCC--CChHHHHhcCCEEEEcCCCCCCCCchHHHHHH
Q 011954 304 LQVPSMHAVVVG-SDMNAQTKFETELRNFVAEKKIQ-DHVHFVNKT--LTVSPYLASIDVLVQNSQARGECFGRITIEAM 379 (474)
Q Consensus 304 ~~~~~~~l~i~G-~g~~~~~~~~~~l~~~~~~~~l~-~~v~~~g~~--~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAm 379 (474)
+.|+++|+|+| +|+ ..+.+++.++++|+. ++|+|+|++ +++..+|+.+|++|+||. . |||++++|||
T Consensus 403 -~~~~~~l~i~G~~g~-----~~~~l~~~~~~~~l~~~~v~~~g~~~~~~~~~~~~~adv~v~ps~--~-~~g~~~lEAm 473 (568)
T 2vsy_A 403 -EVPDSVLWLLSGPGE-----ADARLRAFAHAQGVDAQRLVFMPKLPHPQYLARYRHADLFLDTHP--Y-NAHTTASDAL 473 (568)
T ss_dssp -HCTTCEEEEECCSTT-----HHHHHHHHHHHTTCCGGGEEEECCCCHHHHHHHGGGCSEEECCSS--S-CCSHHHHHHH
T ss_pred -hCCCcEEEEecCCHH-----HHHHHHHHHHHcCCChhHEEeeCCCCHHHHHHHHhcCCEEeeCCC--C-CCcHHHHHHH
Confidence 45899999999 775 789999999999998 999999997 489999999999999998 7 9999999999
Q ss_pred hcCCCEEE-------cCCC-------CcceeeeeCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHH--HH
Q 011954 380 AFQLPVLG-------TAAG-------GTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERV--KD 443 (474)
Q Consensus 380 a~G~PvI~-------s~~~-------g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~--~~ 443 (474)
+||+|||+ |++| |++|++.+ | +++++++|.++++|++.+++|++++++.+ .+
T Consensus 474 a~G~Pvv~~~g~~~~s~~~~~~l~~~g~~e~v~~----------~--~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~ 541 (568)
T 2vsy_A 474 WTGCPVLTTPGETFAARVAGSLNHHLGLDEMNVA----------D--DAAFVAKAVALASDPAALTALHARVDVLRRASG 541 (568)
T ss_dssp HTTCCEEBCCCSSGGGSHHHHHHHHHTCGGGBCS----------S--HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHSS
T ss_pred hCCCCEEeccCCCchHHHHHHHHHHCCChhhhcC----------C--HHHHHHHHHHHhcCHHHHHHHHHHHHHhhhcCC
Confidence 99999999 9999 99998844 5 89999999999999999999999999998 67
Q ss_pred hcCHHHHHHHHHHHHHHHHhhh
Q 011954 444 RFLEHHMSQRIALVLREVLQYA 465 (474)
Q Consensus 444 ~fs~~~~~~~~~~~~~~~~~~~ 465 (474)
.|+|+.++++++++|++++++.
T Consensus 542 ~f~~~~~~~~~~~~y~~~~~~~ 563 (568)
T 2vsy_A 542 VFHMDGFADDFGALLQALARRH 563 (568)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999998753
|
| >1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-34 Score=277.64 Aligned_cols=320 Identities=15% Similarity=0.068 Sum_probs=227.1
Q ss_pred CEEEEEecCCCCCChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhcccchhccceeeee----------------
Q 011954 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEHKMLDRGVQVLS---------------- 138 (474)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------- 138 (474)
|||++++. +.||.+..+..|+++|.++||+|++++......... +...++.+..
T Consensus 7 mkIl~~~~--~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~--------~~~~g~~~~~~~~~~~~~~~~~~~~~ 76 (364)
T 1f0k_A 7 KRLMVMAG--GTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADL--------VPKHGIEIDFIRISGLRGKGIKALIA 76 (364)
T ss_dssp CEEEEECC--SSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHH--------GGGGTCEEEECCCCCCTTCCHHHHHT
T ss_pred cEEEEEeC--CCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhh--------ccccCCceEEecCCccCcCccHHHHH
Confidence 89999973 346777889999999999999999999764321110 0111111110
Q ss_pred --------hhcHHHHhhhcCCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccccchhhhhhcccccccccccc
Q 011954 139 --------AKGEKAINTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYFKLEYVKHLPFVAGAMIDS 210 (474)
Q Consensus 139 --------~~~~~~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~s 210 (474)
......+.+..+||+||+++............ . ...|++.+.|+...... .....+..+.+++.+
T Consensus 77 ~~~~~~~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~~-~---~~~p~v~~~~~~~~~~~---~~~~~~~~d~v~~~~ 149 (364)
T 1f0k_A 77 APLRIFNAWRQARAIMKAYKPDVVLGMGGYVSGPGGLAAW-S---LGIPVVLHEQNGIAGLT---NKWLAKIATKVMQAF 149 (364)
T ss_dssp CHHHHHHHHHHHHHHHHHHCCSEEEECSSTTHHHHHHHHH-H---TTCCEEEEECSSSCCHH---HHHHTTTCSEEEESS
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEEeCCcCchHHHHHHH-H---cCCCEEEEecCCCCcHH---HHHHHHhCCEEEecC
Confidence 11233445567999999997653332211111 1 23577777886432211 111223444444433
Q ss_pred cccHHHHHHhHHHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCE-EEEEecccccCcchHHHH
Q 011954 211 YTTAEYWKNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDL-LFAIINSVSRGKGQDLFL 289 (474)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~-~i~~vgrl~~~Kg~~~ll 289 (474)
... ++ ++.+++||++.+.+.+.. .++.++++.+.. ++++.|++.+.||.+.++
T Consensus 150 ~~~-------------~~--~~~~i~n~v~~~~~~~~~-----------~~~~~~~~~~~~~il~~~g~~~~~k~~~~li 203 (364)
T 1f0k_A 150 PGA-------------FP--NAEVVGNPVRTDVLALPL-----------PQQRLAGREGPVRVLVVGGSQGARILNQTMP 203 (364)
T ss_dssp TTS-------------SS--SCEECCCCCCHHHHTSCC-----------HHHHHTTCCSSEEEEEECTTTCCHHHHHHHH
T ss_pred hhh-------------cC--CceEeCCccchhhcccch-----------hhhhcccCCCCcEEEEEcCchHhHHHHHHHH
Confidence 221 12 688999999988765421 134566666655 555667999999999999
Q ss_pred HHHHHHHHHHHHhccCCCcEE-EEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCCCChHHHHhcCCEEEEcCCCCC
Q 011954 290 HSFYESLQLIREKKLQVPSMH-AVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYLASIDVLVQNSQARG 368 (474)
Q Consensus 290 ~a~~~l~~~~~~~~~~~~~~~-l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv~v~ps~~~~ 368 (474)
+|+..+. .+++ ++++|+++ .+.+++++++++++ +|+|+|+++++.++|+.||++|+|| .
T Consensus 204 ~a~~~l~----------~~~~~l~i~G~~~------~~~l~~~~~~~~~~-~v~~~g~~~~~~~~~~~ad~~v~~s---g 263 (364)
T 1f0k_A 204 QVAAKLG----------DSVTIWHQSGKGS------QQSVEQAYAEAGQP-QHKVTEFIDDMAAAYAWADVVVCRS---G 263 (364)
T ss_dssp HHHHHHG----------GGEEEEEECCTTC------HHHHHHHHHHTTCT-TSEEESCCSCHHHHHHHCSEEEECC---C
T ss_pred HHHHHhc----------CCcEEEEEcCCch------HHHHHHHHhhcCCC-ceEEecchhhHHHHHHhCCEEEECC---c
Confidence 9998872 1677 57789884 47788888888874 7999999999999999999999998 3
Q ss_pred CCCchHHHHHHhcCCCEEEcCCCCcc--------eeeeeCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHH
Q 011954 369 ECFGRITIEAMAFQLPVLGTAAGGTM--------EIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYER 440 (474)
Q Consensus 369 E~~~~~~~EAma~G~PvI~s~~~g~~--------e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~ 440 (474)
|++++|||+||+|||+++.+|.+ +++.++ .|++++++|.++++++++|.++ |++.+++|++++++.
T Consensus 264 ---~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~g-~g~~~~~~d~~~~~la~~i~~l--~~~~~~~~~~~~~~~ 337 (364)
T 1f0k_A 264 ---ALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAG-AAKIIEQPQLSVDAVANTLAGW--SRETLLTMAERARAA 337 (364)
T ss_dssp ---HHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTT-SEEECCGGGCCHHHHHHHHHTC--CHHHHHHHHHHHHHT
T ss_pred ---hHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhCC-cEEEeccccCCHHHHHHHHHhc--CHHHHHHHHHHHHHh
Confidence 99999999999999999999874 455444 6999988654479999999998 999999999999988
Q ss_pred HHHhcCHHHHHHHHHHHHHHHHhh
Q 011954 441 VKDRFLEHHMSQRIALVLREVLQY 464 (474)
Q Consensus 441 ~~~~fs~~~~~~~~~~~~~~~~~~ 464 (474)
+. .|+|++++++++++|++.-.+
T Consensus 338 ~~-~~~~~~~~~~~~~~y~~~~~~ 360 (364)
T 1f0k_A 338 SI-PDATERVANEVSRVARALEHH 360 (364)
T ss_dssp CC-TTHHHHHHHHHHHHHTTC---
T ss_pred hc-cCHHHHHHHHHHHHHHHHHhh
Confidence 75 699999999999999876543
|
| >2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-33 Score=273.40 Aligned_cols=239 Identities=15% Similarity=0.154 Sum_probs=178.5
Q ss_pred CCCEEEEcccchhhHHhHHhhhcccccccceeeeeecccc-c------cchhhhhhcccccccccccccccHHHHHHhHH
Q 011954 150 NADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRG-H------YFKLEYVKHLPFVAGAMIDSYTTAEYWKNRTR 222 (474)
Q Consensus 150 ~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~-~------~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 222 (474)
++|+||.++...+.+...... ...|++.+.|+... . .........++.++.+++.|....+.+.+
T Consensus 124 ~~DvIh~~~~~~~~~~~~~~~-----~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~--- 195 (406)
T 2hy7_A 124 ESDVIVFESGIAVAFIELAKR-----VNPAAKLVYRASDGLSTINVASYIEREFDRVAPTLDVIALVSPAMAAEVVS--- 195 (406)
T ss_dssp HCSEEEEESSGGGGGHHHHHH-----HCTTSEEEEEESSCHHHHTCCHHHHHHHHHHGGGCSEEEESCGGGGGGCSC---
T ss_pred CCCEEEECCchHHHHHHHHHH-----hCCCEEEEEeccchhhcccccHHHHHHHHHHHHhCCEEEEcCHHHHHHHHh---
Confidence 799999655443331111111 23577788886432 1 01112334456777788887777665432
Q ss_pred HHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHHHHHHHHHHHHHHHHh
Q 011954 223 ERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREK 302 (474)
Q Consensus 223 ~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~ 302 (474)
++ ++.|||||+|.+.|.+.... -.+++++++|+||+.+.||+ +++ +.+
T Consensus 196 --~~----~i~vipngvd~~~f~~~~~~---------------~~~~~~~i~~vGrl~~~Kg~---~~~---l~~----- 243 (406)
T 2hy7_A 196 --RD----NVFHVGHGVDHNLDQLGDPS---------------PYAEGIHAVAVGSMLFDPEF---FVV---ASK----- 243 (406)
T ss_dssp --ST----TEEECCCCBCTTHHHHHCSC---------------SCCSSEEEEEECCTTBCHHH---HHH---HHH-----
T ss_pred --cC----CEEEEcCCcChHhcCccccc---------------ccCCCcEEEEEeccccccCH---HHH---HHH-----
Confidence 12 89999999999887543210 01233889999999999998 333 322
Q ss_pred ccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCC--CChHHHHhcCCEEEEcCCCCCCCCchHHHHHH-
Q 011954 303 KLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKT--LTVSPYLASIDVLVQNSQARGECFGRITIEAM- 379 (474)
Q Consensus 303 ~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~--~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAm- 379 (474)
+.++++|+|+|+|+ ++++++.++|+|+|++ +++.++|+.||++|+||. .|+||++++|||
T Consensus 244 --~~~~~~l~ivG~g~-------------~~~~~l~~~V~f~G~~~~~~l~~~~~~adv~v~ps~--~E~~~~~~lEAm~ 306 (406)
T 2hy7_A 244 --AFPQVTFHVIGSGM-------------GRHPGYGDNVIVYGEMKHAQTIGYIKHARFGIAPYA--SEQVPVYLADSSM 306 (406)
T ss_dssp --HCTTEEEEEESCSS-------------CCCTTCCTTEEEECCCCHHHHHHHHHTCSEEECCBS--CSCCCTTHHHHCH
T ss_pred --hCCCeEEEEEeCch-------------HHhcCCCCCEEEcCCCCHHHHHHHHHhcCEEEECCC--cccCchHHHHHHH
Confidence 24899999999983 5667888999999986 689999999999999999 899999999999
Q ss_pred ------hcCCCEEEcCCCCcceeeeeCCceee-ecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHH
Q 011954 380 ------AFQLPVLGTAAGGTMEIVVNGTTGLL-HPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRFLEHHMSQ 452 (474)
Q Consensus 380 ------a~G~PvI~s~~~g~~e~v~~~~~G~l-~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~fs~~~~~~ 452 (474)
|||+|||+|+. +.++.+|++ ++++| +++|+++|.++++|++ + ...++|+|+.+++
T Consensus 307 Kl~eYla~G~PVIas~~------v~~~~~G~l~v~~~d--~~~la~ai~~ll~~~~---------~-~~~~~~sw~~~a~ 368 (406)
T 2hy7_A 307 KLLQYDFFGLPAVCPNA------VVGPYKSRFGYTPGN--ADSVIAAITQALEAPR---------V-RYRQCLNWSDTTD 368 (406)
T ss_dssp HHHHHHHHTCCEEEEGG------GTCSCSSEEEECTTC--HHHHHHHHHHHHHCCC---------C-CCSCCCBHHHHHH
T ss_pred HHHHHhhCCCcEEEehh------cccCcceEEEeCCCC--HHHHHHHHHHHHhCcc---------h-hhhhcCCHHHHHH
Confidence 99999999997 567889999 99999 9999999999999876 1 2346799999999
Q ss_pred HHHHH--HHHHHh
Q 011954 453 RIALV--LREVLQ 463 (474)
Q Consensus 453 ~~~~~--~~~~~~ 463 (474)
+++++ |+++..
T Consensus 369 ~~~~~~~y~~~~~ 381 (406)
T 2hy7_A 369 RVLDPRAYPETRL 381 (406)
T ss_dssp HHHCGGGSGGGBS
T ss_pred HHHHhhcccccCc
Confidence 99999 887654
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=4e-31 Score=261.16 Aligned_cols=305 Identities=14% Similarity=0.074 Sum_probs=208.1
Q ss_pred cCCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccc--------cccc-hhh---------------------hhh
Q 011954 149 LNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMR--------GHYF-KLE---------------------YVK 198 (474)
Q Consensus 149 ~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~--------~~~~-~~~---------------------~~~ 198 (474)
..|||+|+|+...+..+..+... . ...++++++|... +... ... .+.
T Consensus 180 ~~pdIiH~HDW~tg~~~~~Lk~~-~--~~i~tVfTiH~telGR~lagqg~~~~y~~L~~~~~d~ea~~~~i~~~~~~EKa 256 (725)
T 3nb0_A 180 QHAIVAHFHEWLAGVALPLCRKR-R--IDVVTIFTTHATLLGRYLCASGSFDFYNCLESVDVDHEAGRFGIYHRYCIERA 256 (725)
T ss_dssp SEEEEEEEESGGGCTHHHHHHHT-T--CSCEEEEEESSCHHHHHHTSSSCSCHHHHGGGCCHHHHHHHTTCHHHHHHHHH
T ss_pred CCCcEEEeCchhhhHHHHHHHHh-C--CCCCEEEEEecchhhhhhhhcCCCchhhhhhhcCCChhhhhhchhHHHHHHHH
Confidence 45999999987776654443322 2 2468999999873 2110 000 011
Q ss_pred cccccccccccccccHHHHHHhHHHHhcCCCCCeEEEeCCCCccccchhhhhH-HHHHhHHHH----HH----hcCCC-C
Q 011954 199 HLPFVAGAMIDSYTTAEYWKNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSV-ARRVLREHV----RE----SLGVR-D 268 (474)
Q Consensus 199 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~-~~~~~~~~~----r~----~~~~~-~ 268 (474)
....++.++++|..+.+... ..++.+.+.+ ||||||.+.|.+..... .+...+.++ +. .++++ +
T Consensus 257 ga~~AD~ITTVS~~yA~Ei~----~Ll~r~~d~i--IpNGID~~~f~p~~~~~~~k~~aK~klq~~l~~~~~~~l~l~~d 330 (725)
T 3nb0_A 257 AAHSADVFTTVSQITAFEAE----HLLKRKPDGI--LPNGLNVIKFQAFHEFQNLHALKKEKINDFVRGHFHGCFDFDLD 330 (725)
T ss_dssp HHHHSSEEEESSHHHHHHHH----HHTSSCCSEE--CCCCBCCCCCSSTTHHHHHHHHHHHHHHHHHHHHTTTCCCSCGG
T ss_pred HHHhCCEEEECCHHHHHHHH----HHhcCCCCEE--EcCCccccccCcchhhHHHHHHHHHHHHHHHHhhcccCCCCCCC
Confidence 12345556666666555444 3456555543 99999999998752211 112223333 23 22454 3
Q ss_pred CCEEEEEecccc-cCcchHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCc-------------------------
Q 011954 269 DDLLFAIINSVS-RGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQT------------------------- 322 (474)
Q Consensus 269 ~~~~i~~vgrl~-~~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~------------------------- 322 (474)
+.+++..+||++ .+||+|++++|+.+|...++..+.+..-+.|+|+..+.....
T Consensus 331 k~liifivgRle~~nKGiDl~ieAl~~L~~~l~~~~~~~~vvafii~p~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~ 410 (725)
T 3nb0_A 331 NTLYFFIAGRYEYKNKGADMFIEALARLNYRLKVSGSKKTVVAFIVMPAKNNSFTVEALKGQAEVRALENTVHEVTTSIG 410 (725)
T ss_dssp GEEEEEEESSCCTTTTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceeEEEEEEEeccccCCHHHHHHHHHHHHHHHhhccCCCcEEEEEEeCCCCCCCchhhhcchhHHHHHHHHHHHHHHHHh
Confidence 446676789999 689999999999999888776544445678888887633210
Q ss_pred -----------------------------------------------------------hHHHHHHHHHHHcCCCCe---
Q 011954 323 -----------------------------------------------------------KFETELRNFVAEKKIQDH--- 340 (474)
Q Consensus 323 -----------------------------------------------------------~~~~~l~~~~~~~~l~~~--- 340 (474)
+..+.+...++++++.++
T Consensus 411 ~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~~~~~~~~lpp~~TH~~~~~~~D~Il~~~r~l~L~N~~~d 490 (725)
T 3nb0_A 411 KRIFDHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALRRPEGQLPPIVTHNMVDDANDLILNKIRQVQLFNSPSD 490 (725)
T ss_dssp HHHHHHHHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHHHCCCTTCCCCSBSEEETTGGGCHHHHHHHHHTCCCCTTC
T ss_pred HHHHHHHhcccccccCCCCCCCHHHhcChHHHHHHHHHHHhhccCCCCCCCeeeeecccCCccHHHHHHHhcCCCCCcCC
Confidence 011223344456666655
Q ss_pred ---EEEec-CC--------CChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCcceeeeeC-------C
Q 011954 341 ---VHFVN-KT--------LTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNG-------T 401 (474)
Q Consensus 341 ---v~~~g-~~--------~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~~e~v~~~-------~ 401 (474)
|+|++ +. .++.++|+.||++|+||. +|+||++++||||||+|||+|+.||++|+|.++ .
T Consensus 491 rVKVIf~P~~L~~~d~lf~~d~~~~~~~advfV~PS~--~EgfGl~~LEAmA~G~PvI~s~~gG~~d~V~dg~~~~~~~~ 568 (725)
T 3nb0_A 491 RVKMIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSY--YEPWGYTPAECTVMGVPSITTNVSGFGSYMEDLIETNQAKD 568 (725)
T ss_dssp SEEEEECCSCCCTTCSSSCCCHHHHHHHCSEEECCCS--SBSSCHHHHHHHHTTCCEEEETTBHHHHHHHTTSCHHHHHH
T ss_pred ceeEEEeccccCCCCccchhHHHHHHhhceEEEeccc--cCCCCHHHHHHHHcCCCEEEeCCCChhhhhhccccccCCCC
Confidence 66765 32 368999999999999999 999999999999999999999999999998765 3
Q ss_pred ceeeecCCC-CChHHHHHHHHHHh----h-CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhh
Q 011954 402 TGLLHPTGK-EGVTPLANNIVKLA----T-HVERRLTMGKKGYERVKDRFLEHHMSQRIALVLREVLQYA 465 (474)
Q Consensus 402 ~G~l~~~~d-~~~~~la~~i~~ll----~-~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~~~ 465 (474)
+|+++++.+ .++++++++|.+++ + +++.+..|++++++.+ +.|+|++++++|+++|+.++.+.
T Consensus 569 tG~lV~~rd~~d~ee~aeaLa~aL~~f~~~d~~~r~~mr~~ar~~A-~~FSWe~iA~~Yl~~Ye~aL~~~ 637 (725)
T 3nb0_A 569 YGIYIVDRRFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEALS-DLLDWKRMGLEYVKARQLALRRG 637 (725)
T ss_dssp TTEEEECCSSSCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHGG-GGGBHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEeCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHhhc
Confidence 799885421 12565555555444 3 7888999999988766 46999999999999999998654
|
| >3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A | Back alignment and structure |
|---|
Probab=99.98 E-value=1.9e-32 Score=265.54 Aligned_cols=345 Identities=11% Similarity=0.069 Sum_probs=220.0
Q ss_pred ccccCEEEEEecCCCCCChhHHHHHHHHHHHhc-C-cEEEEEeCCCCCCchhhh---hhccc--chhc--cceeee----
Q 011954 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGV-G-AEVVWITNQKPNEPDEVI---YSLEH--KMLD--RGVQVL---- 137 (474)
Q Consensus 71 ~~~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~-G-~~V~v~~~~~~~~~~~~~---~~~~~--~~~~--~~~~~~---- 137 (474)
++.+|||++++...+.. .....++++|.+. | ++|.+++...+....... ..+.. .+.. .+....
T Consensus 5 m~~~mkIl~v~~~~~~~---~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (375)
T 3beo_A 5 MTERLKVMTIFGTRPEA---IKMAPLVLELQKHPEKIESIVTVTAQHRQMLDQVLSIFGITPDFDLNIMKDRQTLIDITT 81 (375)
T ss_dssp CSSCEEEEEEECSHHHH---HHHHHHHHHHTTCTTTEEEEEEECCSSSHHHHHHHHHHTCCCSEECCCCCTTCCHHHHHH
T ss_pred CCcCceEEEEecCcHHH---HHHHHHHHHHHhCCCCCCeEEEEcCCCHHHHHHHHHHcCCCCccccccCCCcccHHHHHH
Confidence 34568999998643222 2456788888876 4 888777654332111100 00000 0000 000000
Q ss_pred -ehhcHHHHhhhcCCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccccc----hhh-hhhcc-cccccccccc
Q 011954 138 -SAKGEKAINTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYF----KLE-YVKHL-PFVAGAMIDS 210 (474)
Q Consensus 138 -~~~~~~~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~----~~~-~~~~~-~~~~~~~~~s 210 (474)
.......+.+..+||+||+|+.....+........ ...|++.+.|+...... ... ....+ +..+.+++.+
T Consensus 82 ~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~~~~---~~ip~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s 158 (375)
T 3beo_A 82 RGLEGLDKVMKEAKPDIVLVHGDTTTTFIASLAAFY---NQIPVGHVEAGLRTWDKYSPYPEEMNRQLTGVMADLHFSPT 158 (375)
T ss_dssp HHHHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHH---TTCCEEEESCCCCCSCTTSSTTHHHHHHHHHHHCSEEEESS
T ss_pred HHHHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHH---HCCCEEEEecccccccccCCChhHhhhhHHhhhhheeeCCC
Confidence 01124455667899999998753222221111111 23467766665421110 011 11111 2245555555
Q ss_pred cccHHHHHHhHHHHhcCCCCCeEEEeCC-CCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccC-cchHHH
Q 011954 211 YTTAEYWKNRTRERLGIRMPETYVVHLG-NSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRG-KGQDLF 288 (474)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~ki~vi~ng-vd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~-Kg~~~l 288 (474)
....+.+ . .+|++.+++.+|+|| +|...+.+.... +.++++++ ++++++++++||+.+. ||++.+
T Consensus 159 ~~~~~~~----~-~~g~~~~~i~vi~n~~~d~~~~~~~~~~------~~~~~~~~--~~~~~vl~~~gr~~~~~K~~~~l 225 (375)
T 3beo_A 159 AKSATNL----Q-KENKDESRIFITGNTAIDALKTTVKETY------SHPVLEKL--GNNRLVLMTAHRRENLGEPMRNM 225 (375)
T ss_dssp HHHHHHH----H-HTTCCGGGEEECCCHHHHHHHHHCCSSC------CCHHHHTT--TTSEEEEEECCCGGGTTHHHHHH
T ss_pred HHHHHHH----H-HcCCCcccEEEECChhHhhhhhhhhhhh------hHHHHHhc--cCCCeEEEEecccccchhHHHHH
Confidence 5544433 2 357777899999999 777655432100 12344444 3556778899999875 999999
Q ss_pred HHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCC--CChHHHHhcCCEEEEcCCC
Q 011954 289 LHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKT--LTVSPYLASIDVLVQNSQA 366 (474)
Q Consensus 289 l~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~--~~~~~~~~~adv~v~ps~~ 366 (474)
++|+.++.+ ++|++++++ |.|+. .+..+.+++++ +..++|+|+|+. .++..+|+.||++|+||
T Consensus 226 i~a~~~l~~-------~~~~~~~i~-~~g~~--~~~~~~~~~~~---~~~~~v~~~g~~~~~~~~~~~~~ad~~v~~s-- 290 (375)
T 3beo_A 226 FRAIKRLVD-------KHEDVQVVY-PVHMN--PVVRETANDIL---GDYGRIHLIEPLDVIDFHNVAARSYLMLTDS-- 290 (375)
T ss_dssp HHHHHHHHH-------HCTTEEEEE-ECCSC--HHHHHHHHHHH---TTCTTEEEECCCCHHHHHHHHHTCSEEEECC--
T ss_pred HHHHHHHHh-------hCCCeEEEE-eCCCC--HHHHHHHHHHh---hccCCEEEeCCCCHHHHHHHHHhCcEEEECC--
Confidence 999998865 347888655 65541 11233333332 333689998764 48999999999999987
Q ss_pred CCCCCchHHHHHHhcCCCEEEcCC-CCcceeeeeCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhc
Q 011954 367 RGECFGRITIEAMAFQLPVLGTAA-GGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRF 445 (474)
Q Consensus 367 ~~E~~~~~~~EAma~G~PvI~s~~-~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~f 445 (474)
|.+++|||+||+|||+++. ||.+|++.++ +|+++++ | +++|+++|.++++|++.+++|+++++++. +.|
T Consensus 291 -----g~~~lEA~a~G~Pvi~~~~~~~~~e~v~~g-~g~~v~~-d--~~~la~~i~~ll~~~~~~~~~~~~~~~~~-~~~ 360 (375)
T 3beo_A 291 -----GGVQEEAPSLGVPVLVLRDTTERPEGIEAG-TLKLAGT-D--EETIFSLADELLSDKEAHDKMSKASNPYG-DGR 360 (375)
T ss_dssp -----HHHHHHHHHHTCCEEECSSCCSCHHHHHTT-SEEECCS-C--HHHHHHHHHHHHHCHHHHHHHCCCCCTTC-CSC
T ss_pred -----CChHHHHHhcCCCEEEecCCCCCceeecCC-ceEEcCC-C--HHHHHHHHHHHHhChHhHhhhhhcCCCCC-CCc
Confidence 5679999999999999964 8999999777 9999986 6 99999999999999999999999998876 569
Q ss_pred CHHHHHHHHHHHHH
Q 011954 446 LEHHMSQRIALVLR 459 (474)
Q Consensus 446 s~~~~~~~~~~~~~ 459 (474)
+|+++++.+.++++
T Consensus 361 ~~~~i~~~~~~~~~ 374 (375)
T 3beo_A 361 ASERIVEAILKHFN 374 (375)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999988763
|
| >1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=8.1e-32 Score=261.95 Aligned_cols=353 Identities=13% Similarity=0.057 Sum_probs=226.9
Q ss_pred CEEEEEecCCCCCChhHHHHHHHHHHHhcCc-EEEEEeCCCCCCc-hhhhh--hccc--chhc--cceeee-----ehhc
Q 011954 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGA-EVVWITNQKPNEP-DEVIY--SLEH--KMLD--RGVQVL-----SAKG 141 (474)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~-~V~v~~~~~~~~~-~~~~~--~~~~--~~~~--~~~~~~-----~~~~ 141 (474)
|||++++... .+ ......++++|+++|+ ++.++........ ..... .+.. .+.. .+.... ....
T Consensus 1 mkIl~v~~~~--~~-~~~~~~l~~~L~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (384)
T 1vgv_A 1 MKVLTVFGTR--PE-AIKMAPLVHALAKDPFFEAKVCVTAQHREMLDQVLKLFSIVPDYDLNIMQPGQGLTEITCRILEG 77 (384)
T ss_dssp CEEEEEECSH--HH-HHHHHHHHHHHHHSTTCEEEEEECCSSGGGGHHHHHHHTCCCSEECCCCSTTSCHHHHHHHHHHH
T ss_pred CeEEEEeccc--HH-HHHHHHHHHHHHhCCCCceEEEEcCCCHHHHHHHHHHcCCCCCcceecCCCCccHHHHHHHHHHH
Confidence 7899987542 11 1346789999999994 8877654322111 11100 0000 0000 000000 0123
Q ss_pred HHHHhhhcCCCEEEEcccchhhHHhHHhhhcccccccceeeeeecccccc----chhhhh-hc-ccccccccccccccHH
Q 011954 142 EKAINTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHY----FKLEYV-KH-LPFVAGAMIDSYTTAE 215 (474)
Q Consensus 142 ~~~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~----~~~~~~-~~-~~~~~~~~~~s~~~~~ 215 (474)
...+.+..+||+||+|+.....+....... . ...|++++.|+..... +..... .. .+..+.+++.+....+
T Consensus 78 l~~~l~~~~pDvv~~~~~~~~~~~~~~~a~-~--~~ip~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~ 154 (384)
T 1vgv_A 78 LKPILAEFKPDVVLVHGDTTTTLATSLAAF-Y--QRIPVGHVEAGLRTGDLYSPWPEEANRTLTGHLAMYHFSPTETSRQ 154 (384)
T ss_dssp HHHHHHHHCCSEEEEETTCHHHHHHHHHHH-T--TTCCEEEESCCCCCSCTTSSTTHHHHHHHHHTTCSEEEESSHHHHH
T ss_pred HHHHHHHhCCCEEEEeCCchHHHHHHHHHH-H--HCCCEEEEecccccccccCCCchHhhHHHHHhhccEEEcCcHHHHH
Confidence 445566789999999975222222222221 1 2357777777653211 011111 11 1335555555555444
Q ss_pred HHHHhHHHHhcCCCCCeEEEeCCC-CccccchhhhhHHHHHhHHHHHHhcC-CCC-CCEEEEEecccccC-cchHHHHHH
Q 011954 216 YWKNRTRERLGIRMPETYVVHLGN-SKDLMDIAEDSVARRVLREHVRESLG-VRD-DDLLFAIINSVSRG-KGQDLFLHS 291 (474)
Q Consensus 216 ~~~~~~~~~~~~~~~ki~vi~ngv-d~~~~~~~~~~~~~~~~~~~~r~~~~-~~~-~~~~i~~vgrl~~~-Kg~~~ll~a 291 (474)
.+. .+|++.+++.+++||+ |...+.+.... .....+.++++++| ++. ++++++++||+.+. ||++.+++|
T Consensus 155 ~l~-----~~g~~~~~i~vi~n~~~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~vl~~~gr~~~~~kg~~~li~a 228 (384)
T 1vgv_A 155 NLL-----RENVADSRIFITGNTVIDALLWVRDQVM-SSDKLRSELAANYPFIDPDKKMILVTGHRRESFGRGFEEICHA 228 (384)
T ss_dssp HHH-----HTTCCGGGEEECCCHHHHHHHHHHHHTT-TCHHHHHHHHTTCTTCCTTSEEEEEECCCBSSCCHHHHHHHHH
T ss_pred HHH-----HcCCChhhEEEeCChHHHHHHhhhhccc-cchhhhHHHHHhccccCCCCCEEEEEeCCccccchHHHHHHHH
Confidence 332 4677778899999995 33222111000 00001235778888 744 45688899999876 999999999
Q ss_pred HHHHHHHHHHhccCCCcEEEEEE-cCCCCcCchHHHHHHHHHHHcCCCCeEEEecCC--CChHHHHhcCCEEEEcCCCCC
Q 011954 292 FYESLQLIREKKLQVPSMHAVVV-GSDMNAQTKFETELRNFVAEKKIQDHVHFVNKT--LTVSPYLASIDVLVQNSQARG 368 (474)
Q Consensus 292 ~~~l~~~~~~~~~~~~~~~l~i~-G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~--~~~~~~~~~adv~v~ps~~~~ 368 (474)
+.++.+ +.++++|+++ |+++ +..+.+++++.. .++|+|+|+. +++.++|+.||++|+||
T Consensus 229 ~~~l~~-------~~~~~~l~i~~g~~~----~~~~~l~~~~~~---~~~v~~~g~~~~~~~~~~~~~ad~~v~~S---- 290 (384)
T 1vgv_A 229 LADIAT-------THQDIQIVYPVHLNP----NVREPVNRILGH---VKNVILIDPQEYLPFVWLMNHAWLILTDS---- 290 (384)
T ss_dssp HHHHHH-------HCTTEEEEEECCBCH----HHHHHHHHHHTT---CTTEEEECCCCHHHHHHHHHHCSEEEESS----
T ss_pred HHHHHh-------hCCCeEEEEEcCCCH----HHHHHHHHHhhc---CCCEEEeCCCCHHHHHHHHHhCcEEEECC----
Confidence 998865 3478999886 4332 245556555432 3689997643 68999999999999998
Q ss_pred CCCchHHHHHHhcCCCEEEcCC-CCcceeeeeCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCH
Q 011954 369 ECFGRITIEAMAFQLPVLGTAA-GGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRFLE 447 (474)
Q Consensus 369 E~~~~~~~EAma~G~PvI~s~~-~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~fs~ 447 (474)
|.+++|||+||+|||+++. ||.+|++.++ +|+++++ | +++|+++|.++++|++.+++|+++++++. +.|+|
T Consensus 291 ---g~~~lEA~a~G~PvI~~~~~~~~~e~v~~g-~g~lv~~-d--~~~la~~i~~ll~d~~~~~~~~~~~~~~~-~~~~~ 362 (384)
T 1vgv_A 291 ---GGIQEEAPSLGKPVLVMRDTTERPEAVTAG-TVRLVGT-D--KQRIVEEVTRLLKDENEYQAMSRAHNPYG-DGQAC 362 (384)
T ss_dssp ---STGGGTGGGGTCCEEEESSCCSCHHHHHHT-SEEEECS-S--HHHHHHHHHHHHHCHHHHHHHHSSCCTTC-CSCHH
T ss_pred ---cchHHHHHHcCCCEEEccCCCCcchhhhCC-ceEEeCC-C--HHHHHHHHHHHHhChHHHhhhhhccCCCc-CCCHH
Confidence 3348999999999999986 8999999877 9999987 6 99999999999999999999999998775 56999
Q ss_pred HHHHHHHHHHHHHHHhhh
Q 011954 448 HHMSQRIALVLREVLQYA 465 (474)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~ 465 (474)
+++++.+.++|+++....
T Consensus 363 ~~i~~~~~~~~~~~~~~~ 380 (384)
T 1vgv_A 363 SRILEALKNNRISLGSHH 380 (384)
T ss_dssp HHHHHHHHHTCCCC----
T ss_pred HHHHHHHHHHHHhhcccc
Confidence 999999999888876653
|
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-30 Score=256.08 Aligned_cols=218 Identities=10% Similarity=0.049 Sum_probs=171.8
Q ss_pred CCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHHHHHHHHHHHHHHHHhccCCCc
Q 011954 229 MPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPS 308 (474)
Q Consensus 229 ~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~~ 308 (474)
..++.|||||||.+.|.+......... ..++|++++ ++.+|+++||+.+.||++.+++|++++.+...+. ..+
T Consensus 218 ~~~v~vip~GID~~~f~~~~~~~~~~~-~~~lr~~~~---~~~vil~VgRl~~~Kgi~~ll~A~~~ll~~~p~~---~~~ 290 (482)
T 1uqt_A 218 AFRTEVYPIGIEPKEIAKQAAGPLPPK-LAQLKAELK---NVQNIFSVERLDYSKGLPERFLAYEALLEKYPQH---HGK 290 (482)
T ss_dssp EEEEEECCCCCCHHHHHHHHHSCCCHH-HHHHHHHTT---TCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGG---TTT
T ss_pred EEEEEEEeccCCHHHHHHHhcCcchHH-HHHHHHHhC---CCEEEEEEeCCcccCCHHHHHHHHHHHHHhCccc---cCc
Confidence 357999999999998865422111111 356788886 5688999999999999999999999987743221 125
Q ss_pred EEEEEEcCCCCcCch----HHHHHHHHHHHcC----CC--CeEEE-ecC--CCChHHHHhcCCEEEEcCCCCCCCCchHH
Q 011954 309 MHAVVVGSDMNAQTK----FETELRNFVAEKK----IQ--DHVHF-VNK--TLTVSPYLASIDVLVQNSQARGECFGRIT 375 (474)
Q Consensus 309 ~~l~i~G~g~~~~~~----~~~~l~~~~~~~~----l~--~~v~~-~g~--~~~~~~~~~~adv~v~ps~~~~E~~~~~~ 375 (474)
+.|+++|++...+.+ ..+++++++.+++ .. ..|+| .|+ .+++..+|+.||+||+||. .||||+++
T Consensus 291 v~Lv~vG~p~~~~~~~~~~l~~~l~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS~--~EGfgLv~ 368 (482)
T 1uqt_A 291 IRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPL--RDGMNLVA 368 (482)
T ss_dssp EEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCS--SBSCCHHH
T ss_pred EEEEEEECCCccchHHHHHHHHHHHHHHHHHhhhcccCCCceEEEeCCCCCHHHHHHHHHHccEEEECCC--cccCCchH
Confidence 889999974322222 3455666655432 21 13665 464 4789999999999999999 99999999
Q ss_pred HHHHhcCC-----CEEEcCCCCcceeeeeCCceeeecCCCCChHHHHHHHHHHhh-CHHHHHHHHHHHHHHHHHhcCHHH
Q 011954 376 IEAMAFQL-----PVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLAT-HVERRLTMGKKGYERVKDRFLEHH 449 (474)
Q Consensus 376 ~EAma~G~-----PvI~s~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~-~~~~~~~~~~~~~~~~~~~fs~~~ 449 (474)
+||||||+ |+|+|+.+|..+.+ . +|+++++.| +++++++|.++++ +++.++++++++++++.+ |||+.
T Consensus 369 lEAmA~g~~~~~gpvV~S~~~G~~~~l--~-~g~lv~p~d--~~~lA~ai~~lL~~~~~~r~~~~~~~~~~v~~-~s~~~ 442 (482)
T 1uqt_A 369 KEYVAAQDPANPGVLVLSQFAGAANEL--T-SALIVNPYD--RDEVAAALDRALTMSLAERISRHAEMLDVIVK-NDINH 442 (482)
T ss_dssp HHHHHHSCTTSCCEEEEETTBGGGGTC--T-TSEEECTTC--HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHH-TCHHH
T ss_pred HHHHHhCCCCCCCCEEEECCCCCHHHh--C-CeEEECCCC--HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh-CCHHH
Confidence 99999997 89999988887777 2 899999999 9999999999998 577899999999999876 99999
Q ss_pred HHHHHHHHHHHH
Q 011954 450 MSQRIALVLREV 461 (474)
Q Consensus 450 ~~~~~~~~~~~~ 461 (474)
+++++++.|+++
T Consensus 443 ~a~~~l~~l~~~ 454 (482)
T 1uqt_A 443 WQECFISDLKQI 454 (482)
T ss_dssp HHHHHHHHHHHS
T ss_pred HHHHHHHHHHhc
Confidence 999999999887
|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.97 E-value=9.4e-31 Score=230.29 Aligned_cols=190 Identities=22% Similarity=0.303 Sum_probs=164.4
Q ss_pred EeCCCCccccc--hhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccc-cCcchHHHHHHHHHHH--HHHHHhccCCCcE
Q 011954 235 VHLGNSKDLMD--IAEDSVARRVLREHVRESLGVRDDDLLFAIINSVS-RGKGQDLFLHSFYESL--QLIREKKLQVPSM 309 (474)
Q Consensus 235 i~ngvd~~~~~--~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~-~~Kg~~~ll~a~~~l~--~~~~~~~~~~~~~ 309 (474)
||||+|.+.|. +.... ....+..+|++++++++ .+|+++|++. +.||++.+++++..+. + +++++
T Consensus 2 ipngvd~~~f~~~~~~~~--~~~~~~~~r~~~~~~~~-~~i~~~G~~~~~~K~~~~li~a~~~l~~~~-------~~~~~ 71 (200)
T 2bfw_A 2 SHNGIDCSFWNESYLTGS--RDERKKSLLSKFGMDEG-VTFMFIGRFDRGQKGVDVLLKAIEILSSKK-------EFQEM 71 (200)
T ss_dssp ---CCCTTTSSGGGSCSC--HHHHHHHHHHHTTCCSC-EEEEEESCBCSSSSCHHHHHHHHHHHTTSG-------GGGGE
T ss_pred CCCccChhhccccccccc--hhhHHHHHHHHcCCCCC-CEEEEeeccccccCCHHHHHHHHHHHHhhc-------cCCCe
Confidence 79999999998 65321 11124678999999754 5889999999 9999999999999885 4 34799
Q ss_pred EEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEE-ecCCC--ChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEE
Q 011954 310 HAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHF-VNKTL--TVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVL 386 (474)
Q Consensus 310 ~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~-~g~~~--~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI 386 (474)
+|+|+|++++ ++.+.+++++++++ +|+| +|+++ ++..+|+.||++|+||. .|++|++++|||+||+|||
T Consensus 72 ~l~i~G~~~~---~~~~~l~~~~~~~~---~v~~~~g~~~~~~~~~~~~~ad~~l~ps~--~e~~~~~~~Ea~a~G~PvI 143 (200)
T 2bfw_A 72 RFIIIGKGDP---ELEGWARSLEEKHG---NVKVITEMLSREFVRELYGSVDFVIIPSY--FEPFGLVALEAMCLGAIPI 143 (200)
T ss_dssp EEEEECCBCH---HHHHHHHHHHHHCT---TEEEECSCCCHHHHHHHHTTCSEEEECCS--CCSSCHHHHHHHHTTCEEE
T ss_pred EEEEECCCCh---HHHHHHHHHHHhcC---CEEEEeccCCHHHHHHHHHHCCEEEECCC--CCCccHHHHHHHHCCCCEE
Confidence 9999999741 26788899999887 8999 99875 89999999999999999 8999999999999999999
Q ss_pred EcCCCCcceeeeeCCceeeecCCCCChHHHHHHHHHHhh-CHHHHHHHHHHHHHHHHHhcC
Q 011954 387 GTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLAT-HVERRLTMGKKGYERVKDRFL 446 (474)
Q Consensus 387 ~s~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~-~~~~~~~~~~~~~~~~~~~fs 446 (474)
+++.++..|++ ++.+|++++++| +++++++|.++++ |++.+++|++++++++.+ ||
T Consensus 144 ~~~~~~~~e~~-~~~~g~~~~~~~--~~~l~~~i~~l~~~~~~~~~~~~~~a~~~~~~-fs 200 (200)
T 2bfw_A 144 ASAVGGLRDII-TNETGILVKAGD--PGELANAILKALELSRSDLSKFRENCKKRAMS-FS 200 (200)
T ss_dssp EESCHHHHHHC-CTTTCEEECTTC--HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH-TC
T ss_pred EeCCCChHHHc-CCCceEEecCCC--HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh-cC
Confidence 99999999999 999999999988 9999999999999 999999999999999988 86
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.96 E-value=5.5e-29 Score=212.06 Aligned_cols=161 Identities=13% Similarity=0.142 Sum_probs=139.5
Q ss_pred CEEEEEecccccCcchHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCC--
Q 011954 270 DLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKT-- 347 (474)
Q Consensus 270 ~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~-- 347 (474)
+++|+++||+.+.||++.+++|+..+. +.++++|+|+|+|+ ..+.++++++++++ +++| |+.
T Consensus 2 ~~~i~~~G~~~~~Kg~~~li~a~~~l~--------~~~~~~l~i~G~g~-----~~~~~~~~~~~~~~--~v~~-g~~~~ 65 (166)
T 3qhp_A 2 PFKIAMVGRYSNEKNQSVLIKAVALSK--------YKQDIVLLLKGKGP-----DEKKIKLLAQKLGV--KAEF-GFVNS 65 (166)
T ss_dssp CEEEEEESCCSTTTTHHHHHHHHHTCT--------TGGGEEEEEECCST-----THHHHHHHHHHHTC--EEEC-CCCCH
T ss_pred ceEEEEEeccchhcCHHHHHHHHHHhc--------cCCCeEEEEEeCCc-----cHHHHHHHHHHcCC--eEEE-eecCH
Confidence 578999999999999999999998873 23799999999986 67899999999987 8999 985
Q ss_pred CChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCC-CEEE-cCCCCcceeeeeCCceeeecCCCCChHHHHHHHHHHhh
Q 011954 348 LTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQL-PVLG-TAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLAT 425 (474)
Q Consensus 348 ~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~-PvI~-s~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~ 425 (474)
+++..+|+.||++|+||. .|+||++++|||+||+ |||+ ++.|+..|++.++ +.+++++| +++++++|.++++
T Consensus 66 ~~~~~~~~~adv~v~ps~--~e~~~~~~~Eama~G~vPvi~~~~~~~~~~~~~~~--~~~~~~~~--~~~l~~~i~~l~~ 139 (166)
T 3qhp_A 66 NELLEILKTCTLYVHAAN--VESEAIACLEAISVGIVPVIANSPLSATRQFALDE--RSLFEPNN--AKDLSAKIDWWLE 139 (166)
T ss_dssp HHHHHHHTTCSEEEECCC--SCCCCHHHHHHHHTTCCEEEECCTTCGGGGGCSSG--GGEECTTC--HHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCEEEECCc--ccCccHHHHHHHhcCCCcEEeeCCCCchhhhccCC--ceEEcCCC--HHHHHHHHHHHHh
Confidence 789999999999999999 8999999999999998 9999 5688899999664 45888888 9999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHhcCHHHHHHH
Q 011954 426 HVERRLTMGKKGYERVKDRFLEHHMSQR 453 (474)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~fs~~~~~~~ 453 (474)
|++.+++|++++++++ ++|+|+.++++
T Consensus 140 ~~~~~~~~~~~~~~~~-~~~s~~~~~~~ 166 (166)
T 3qhp_A 140 NKLERERMQNEYAKSA-LNYTLENSVIQ 166 (166)
T ss_dssp CHHHHHHHHHHHHHHH-HHHC-------
T ss_pred CHHHHHHHHHHHHHHH-HHCChhhhhcC
Confidence 9999999999999988 67999998764
|
| >2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=7.1e-29 Score=239.12 Aligned_cols=312 Identities=9% Similarity=0.021 Sum_probs=210.4
Q ss_pred CEEEEEecCCCCCChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhcccchh--ccceeeeehhcHHHHhhhcCCC
Q 011954 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEHKML--DRGVQVLSAKGEKAINTALNAD 152 (474)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~D 152 (474)
.+|.+.+.. .|..+.+..|+++|.+.| +|.+.+..... ......+...+. .. .++-......++.+..+||
T Consensus 41 ~~iwih~~s---~G~~~~~~~L~~~L~~~~-~v~v~~~~~~~--~~~~~~~~~~v~~~~~-~p~~~~~~l~~~l~~~~pD 113 (374)
T 2xci_A 41 GALWVHTAS---IGEFNTFLPILKELKREH-RILLTYFSPRA--REYLKTKSDFYDCLHP-LPLDNPFSVKRFEELSKPK 113 (374)
T ss_dssp TCEEEECSS---HHHHHHHHHHHHHHHHHS-CEEEEESCGGG--HHHHHTTGGGCSEEEE-CCCSSHHHHHHHHHHHCCS
T ss_pred CCEEEEcCC---HHHHHHHHHHHHHHHhcC-CEEEEEcCCcH--HHHHHHhcccccceeE-CCCCCHHHHHHHHHHhCCC
Confidence 346655532 355688999999999998 88776653211 111111110010 00 1111123456677788999
Q ss_pred EEEEccc--chhhHHhHHhhhcccccccceeeeeeccccccchhhhhhcccccccccccccccHHHHHHhHHHHhcCCCC
Q 011954 153 LVVLNTA--VAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYFKLEYVKHLPFVAGAMIDSYTTAEYWKNRTRERLGIRMP 230 (474)
Q Consensus 153 iV~~~~~--~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 230 (474)
+||++.. ++.. +.. ... |++...+..... ..+...++.++.+++.|....+.+. .+|++
T Consensus 114 iv~~~~~~~~~~~-~~~-~~~-------p~~~~~~~~~~~---~~~~~~~~~~d~ii~~S~~~~~~l~-----~~g~~-- 174 (374)
T 2xci_A 114 ALIVVEREFWPSL-IIF-TKV-------PKILVNAYAKGS---LIEKILSKKFDLIIMRTQEDVEKFK-----TFGAK-- 174 (374)
T ss_dssp EEEEESCCCCHHH-HHH-CCS-------CEEEEEECCCCC---HHHHHHHTTCSEEEESCHHHHHHHH-----TTTCC--
T ss_pred EEEEECccCcHHH-HHH-HhC-------CEEEEEeecCch---HHHHHHHHhCCEEEECCHHHHHHHH-----HcCCC--
Confidence 9998642 2221 111 111 333332222111 1233445667777777776665543 34665
Q ss_pred CeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHHHHHHHHHHHHHHHHhccCCCcEE
Q 011954 231 ETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMH 310 (474)
Q Consensus 231 ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~ 310 (474)
++.|++|+. |.+.... ++. + +.+++++.|+ ..||++.+++|++++.+ ++|+++
T Consensus 175 ki~vi~n~~----f~~~~~~----------~~~--l--~~~vi~~~~~--~~k~~~~ll~A~~~l~~-------~~p~~~ 227 (374)
T 2xci_A 175 RVFSCGNLK----FICQKGK----------GIK--L--KGEFIVAGSI--HTGEVEIILKAFKEIKK-------TYSSLK 227 (374)
T ss_dssp SEEECCCGG----GCCCCCS----------CCC--C--SSCEEEEEEE--CGGGHHHHHHHHHHHHT-------TCTTCE
T ss_pred eEEEcCCCc----cCCCcCh----------hhh--h--cCCEEEEEeC--CCchHHHHHHHHHHHHh-------hCCCcE
Confidence 899999973 2111100 000 1 1245666664 46899999999998865 568999
Q ss_pred EEEEcCCCCcCchHHHHHHHHHHHcCCC--------CeEEEecCCCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcC
Q 011954 311 AVVVGSDMNAQTKFETELRNFVAEKKIQ--------DHVHFVNKTLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQ 382 (474)
Q Consensus 311 l~i~G~g~~~~~~~~~~l~~~~~~~~l~--------~~v~~~g~~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G 382 (474)
|+|+|+|+ +..++++++++++++. ++|.+.|+.+++..+|+.||++++||.. .|++|++++||||||
T Consensus 228 lvivG~g~----~~~~~l~~~~~~~gl~~~~~~~~~~~v~~~~~~~dl~~~y~~aDv~vl~ss~-~e~gg~~~lEAmA~G 302 (374)
T 2xci_A 228 LILVPRHI----ENAKIFEKKARDFGFKTSFFENLEGDVILVDRFGILKELYPVGKIAIVGGTF-VNIGGHNLLEPTCWG 302 (374)
T ss_dssp EEEEESSG----GGHHHHHHHHHHTTCCEEETTCCCSSEEECCSSSCHHHHGGGEEEEEECSSS-SSSCCCCCHHHHTTT
T ss_pred EEEECCCH----HHHHHHHHHHHHCCCceEEecCCCCcEEEECCHHHHHHHHHhCCEEEECCcc-cCCCCcCHHHHHHhC
Confidence 99999986 2336899999999886 4688889889999999999998888752 578899999999999
Q ss_pred CCEEEc-CCCCcceeeeeC-CceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCH
Q 011954 383 LPVLGT-AAGGTMEIVVNG-TTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRFLE 447 (474)
Q Consensus 383 ~PvI~s-~~~g~~e~v~~~-~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~fs~ 447 (474)
+|||++ ++++++|++.+. .+|++++++| +++|+++|.++++| +.+++|++++++++.+++..
T Consensus 303 ~PVI~~~~~~~~~e~~~~~~~~G~l~~~~d--~~~La~ai~~ll~d-~~r~~mg~~ar~~~~~~~ga 366 (374)
T 2xci_A 303 IPVIYGPYTHKVNDLKEFLEKEGAGFEVKN--ETELVTKLTELLSV-KKEIKVEEKSREIKGCYLEK 366 (374)
T ss_dssp CCEEECSCCTTSHHHHHHHHHTTCEEECCS--HHHHHHHHHHHHHS-CCCCCHHHHHHHHHHHHHHH
T ss_pred CCEEECCCccChHHHHHHHHHCCCEEEeCC--HHHHHHHHHHHHhH-HHHHHHHHHHHHHHHhcccH
Confidence 999975 789999988653 5789999888 99999999999999 99999999999999876554
|
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=7.7e-28 Score=234.21 Aligned_cols=288 Identities=13% Similarity=0.038 Sum_probs=207.5
Q ss_pred CCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccccc---------hhhhhhcccccccccccccccHHHHHHh
Q 011954 150 NADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYF---------KLEYVKHLPFVAGAMIDSYTTAEYWKNR 220 (474)
Q Consensus 150 ~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~---------~~~~~~~~~~~~~~~~~s~~~~~~~~~~ 220 (474)
.-|+|.+|+.....+ ..+++...+. .++.+.+|...+... .....+.+-.+|.+...+....+.+...
T Consensus 149 ~~D~VwVhDYhL~ll-p~~lR~~~~~--~~igfFlHiPfPs~e~f~~Lp~~~r~ell~gll~~DligF~t~~y~~~Fl~~ 225 (496)
T 3t5t_A 149 ADPVYLVHDYQLVGV-PALLREQRPD--APILLFVHIPWPSADYWRILPKEIRTGILHGMLPATTIGFFADRWCRNFLES 225 (496)
T ss_dssp SSCEEEEESGGGTTH-HHHHHHHCTT--SCEEEECCSCCCCHHHHTTSCHHHHHHHHHHHTTSSEEEESSHHHHHHHHHH
T ss_pred CCCEEEEeCccHhHH-HHHHHhhCCC--CeEEEEEcCCCCCHHHHhhCcHhHHHHHHHHHHhCCEEEEecHHHHHHHHHH
Confidence 468999998765433 3444444433 478888886532211 1122233334455555555444444444
Q ss_pred HHHHh-cCC-------------CCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchH
Q 011954 221 TRERL-GIR-------------MPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQD 286 (474)
Q Consensus 221 ~~~~~-~~~-------------~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~ 286 (474)
....+ |.. ..++.++|+|||.+.|.+.... .+.++|++++ ++.+|+++||+++.||++
T Consensus 226 ~~r~l~g~~~~~~~~~v~~~gr~v~v~viP~GID~~~f~~~~~~-----~~~~lr~~~~---~~~lIl~VgRLd~~KGi~ 297 (496)
T 3t5t_A 226 VADLLPDARIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGRNPQ-----LPEGIEEWAD---GHRLVVHSGRTDPIKNAE 297 (496)
T ss_dssp HHHHCTTCEEETTTTEEEETTEEEEEEECCCCBCGGGC----CC-----CCTTHHHHHT---TSEEEEEEEESSGGGCHH
T ss_pred HHHHhcCCcccccCCeEEECCEEEEEEEeccEeCHHHhchhhHH-----HHHHHHHHhC---CceEEEEcccCccccCHH
Confidence 44444 322 1367899999999999765421 1246777776 578899999999999999
Q ss_pred HHHHHHHHHHHHHHHhccCCCc---EEEEEEcCCCCcCch----HHHHHHHHHHHcC----CCCeEEEecCC--CChHHH
Q 011954 287 LFLHSFYESLQLIREKKLQVPS---MHAVVVGSDMNAQTK----FETELRNFVAEKK----IQDHVHFVNKT--LTVSPY 353 (474)
Q Consensus 287 ~ll~a~~~l~~~~~~~~~~~~~---~~l~i~G~g~~~~~~----~~~~l~~~~~~~~----l~~~v~~~g~~--~~~~~~ 353 (474)
.+++|+ ++.+. +|+ +.|+++|.+..++.+ +.+++++++.+++ .. .|+|+|.. +++..+
T Consensus 298 ~lL~Af-~ll~~-------~P~~~~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~g~~-~V~f~g~v~~~el~al 368 (496)
T 3t5t_A 298 RAVRAF-VLAAR-------GGGLEKTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGSD-TVRIDNDNDVNHTIAC 368 (496)
T ss_dssp HHHHHH-HHHHH-------TSSCTTEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHHCTT-SEEEEECCCHHHHHHH
T ss_pred HHHHHH-HHHHh-------CcccceEEEEEEECCCCCCchHHHHHHHHHHHHHHHhccccCCc-CEEEeCCCCHHHHHHH
Confidence 999999 88773 354 678888754322222 3445555555443 22 69999974 789999
Q ss_pred HhcCCEEEEcCCCCCCCCchHHHHHHhcC---CCEEEcCCCCcceeeeeCCceeeecCCCCChHHHHHHHHHHhh-CHHH
Q 011954 354 LASIDVLVQNSQARGECFGRITIEAMAFQ---LPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLAT-HVER 429 (474)
Q Consensus 354 ~~~adv~v~ps~~~~E~~~~~~~EAma~G---~PvI~s~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~-~~~~ 429 (474)
|+.||++|+||. .||||++++|||||| .|+|+|..+|..+.+ +.+|++++|.| ++++|++|.++++ +++.
T Consensus 369 y~~ADv~vv~Sl--rEGfgLv~~EamA~~~~~g~lVlSe~aGa~~~l--~~~allVnP~D--~~~lA~AI~~aL~m~~~e 442 (496)
T 3t5t_A 369 FRRADLLIFNST--VDGQNLSTFEAPLVNERDADVILSETCGAAEVL--GEYCRSVNPFD--LVEQAEAISAALAAGPRQ 442 (496)
T ss_dssp HHHCSEEEECCS--SBSCCSHHHHHHHHCSSCCEEEEETTBTTHHHH--GGGSEEECTTB--HHHHHHHHHHHHHCCHHH
T ss_pred HHhccEEEECcc--cccCChhHHHHHHhCCCCCCEEEeCCCCCHHHh--CCCEEEECCCC--HHHHHHHHHHHHcCCHHH
Confidence 999999999999 999999999999997 899999999998887 45799999999 9999999999998 5678
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhh
Q 011954 430 RLTMGKKGYERVKDRFLEHHMSQRIALVLREVLQY 464 (474)
Q Consensus 430 ~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~~ 464 (474)
++++.++.++++.+ ++....++.+++.++.....
T Consensus 443 r~~r~~~~~~~V~~-~d~~~W~~~fl~~L~~~~~~ 476 (496)
T 3t5t_A 443 RAEAAARRRDAARP-WTLEAWVQAQLDGLAADHAA 476 (496)
T ss_dssp HHHHHHHHHHHHTT-CBHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-CCHHHHHHHHHHHHhhcccc
Confidence 88888999998866 99999999999988877544
|
| >1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3 | Back alignment and structure |
|---|
Probab=99.95 E-value=6.7e-28 Score=233.60 Aligned_cols=338 Identities=12% Similarity=0.025 Sum_probs=208.2
Q ss_pred cCEEEEEecCCCCCChhHHHHHHHHHHHhc-CcEEEEEeCCCCCCc-hhhhhhccc----chh--ccceee-----eehh
Q 011954 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGV-GAEVVWITNQKPNEP-DEVIYSLEH----KML--DRGVQV-----LSAK 140 (474)
Q Consensus 74 ~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~-G~~V~v~~~~~~~~~-~~~~~~~~~----~~~--~~~~~~-----~~~~ 140 (474)
||||++++...+..| ....++++|.+. ||+|.+++....... ......+.. .+. ..+... ....
T Consensus 5 mmkIl~v~~~~~~~~---~~~~l~~~L~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (376)
T 1v4v_A 5 MKRVVLAFGTRPEAT---KMAPVYLALRGIPGLKPLVLLTGQHREQLRQALSLFGIQEDRNLDVMQERQALPDLAARILP 81 (376)
T ss_dssp CEEEEEEECSHHHHH---HHHHHHHHHHTSTTEEEEEEECSSCHHHHHHHHHTTTCCCSEECCCCSSCCCHHHHHHHHHH
T ss_pred ceEEEEEEeccHHHH---HHHHHHHHHHhCCCCceEEEEcCCcHHHHHHHHHHcCCCcccccccCCCCccHHHHHHHHHH
Confidence 489999996532222 356789999988 899887764321110 000000000 000 000000 0011
Q ss_pred cHHHHhhhcCCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccccc----hh-hhhhcc-cccccccccccccH
Q 011954 141 GEKAINTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYF----KL-EYVKHL-PFVAGAMIDSYTTA 214 (474)
Q Consensus 141 ~~~~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~----~~-~~~~~~-~~~~~~~~~s~~~~ 214 (474)
....+.+..+||+||+|+.....+........ ...|++.+.+....... .. ...+.+ ...+.+++.+....
T Consensus 82 ~l~~~l~~~~pDvv~~~~~~~~~~~~~~~a~~---~~ip~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 158 (376)
T 1v4v_A 82 QAARALKEMGADYVLVHGDTLTTFAVAWAAFL---EGIPVGHVEAGLRSGNLKEPFPEEANRRLTDVLTDLDFAPTPLAK 158 (376)
T ss_dssp HHHHHHHHTTCSEEEEESSCHHHHHHHHHHHH---TTCCEEEETCCCCCSCTTSSTTHHHHHHHHHHHCSEEEESSHHHH
T ss_pred HHHHHHHHcCCCEEEEeCChHHHHHHHHHHHH---hCCCEEEEeCCCccccccCCCchHHHHHHHHHHhceeeCCCHHHH
Confidence 34455667899999998754333322222211 12455543333211100 00 111111 22334444444443
Q ss_pred HHHHHhHHHHhcCCCCCeEEEeCCC-CccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHHHHHHHH
Q 011954 215 EYWKNRTRERLGIRMPETYVVHLGN-SKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFY 293 (474)
Q Consensus 215 ~~~~~~~~~~~~~~~~ki~vi~ngv-d~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~ 293 (474)
+. +. .+|++.+++.+++|++ |...+... +.++++++ ++++++++++||+...||++.+++|++
T Consensus 159 ~~----l~-~~g~~~~ki~vi~n~~~d~~~~~~~---------~~~~~~~~--~~~~~vl~~~gr~~~~k~~~~ll~a~~ 222 (376)
T 1v4v_A 159 AN----LL-KEGKREEGILVTGQTGVDAVLLAAK---------LGRLPEGL--PEGPYVTVTMHRRENWPLLSDLAQALK 222 (376)
T ss_dssp HH----HH-TTTCCGGGEEECCCHHHHHHHHHHH---------HCCCCTTC--CSSCEEEECCCCGGGGGGHHHHHHHHH
T ss_pred HH----HH-HcCCCcceEEEECCchHHHHhhhhh---------hhHHHHhc--CCCCEEEEEeCcccchHHHHHHHHHHH
Confidence 33 32 3577778899999975 32211100 11123333 245677888999988889999999999
Q ss_pred HHHHHHHHhccCCCcEEEEEE-cCCCCcCchHHHHHHHHHHHcCCCCeEEEecCC--CChHHHHhcCCEEEEcCCCCCCC
Q 011954 294 ESLQLIREKKLQVPSMHAVVV-GSDMNAQTKFETELRNFVAEKKIQDHVHFVNKT--LTVSPYLASIDVLVQNSQARGEC 370 (474)
Q Consensus 294 ~l~~~~~~~~~~~~~~~l~i~-G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~--~~~~~~~~~adv~v~ps~~~~E~ 370 (474)
++.+ ++++++++++ |+++ ...+.+++++.. .++|+|+|+. .++.++|+.||++|.|| +
T Consensus 223 ~l~~-------~~~~~~lv~~~g~~~----~~~~~l~~~~~~---~~~v~~~g~~g~~~~~~~~~~ad~~v~~S----~- 283 (376)
T 1v4v_A 223 RVAE-------AFPHLTFVYPVHLNP----VVREAVFPVLKG---VRNFVLLDPLEYGSMAALMRASLLLVTDS----G- 283 (376)
T ss_dssp HHHH-------HCTTSEEEEECCSCH----HHHHHHHHHHTT---CTTEEEECCCCHHHHHHHHHTEEEEEESC----H-
T ss_pred HHHh-------hCCCeEEEEECCCCH----HHHHHHHHHhcc---CCCEEEECCCCHHHHHHHHHhCcEEEECC----c-
Confidence 8865 3478898886 7552 245666666532 3589999532 38999999999999987 2
Q ss_pred CchHHHHHHhcCCCEEEc-CCCCcceeeeeCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHH
Q 011954 371 FGRITIEAMAFQLPVLGT-AAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRFLEHH 449 (474)
Q Consensus 371 ~~~~~~EAma~G~PvI~s-~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~fs~~~ 449 (474)
|+ ++|||+||+|||++ +.+|..+++.++ +|++++. | +++|+++|.++++|++.+++|++++ +.|.+..
T Consensus 284 -g~-~lEA~a~G~PvI~~~~~~~~~~~~~~g-~g~lv~~-d--~~~la~~i~~ll~d~~~~~~~~~~~-----~~~~~~~ 352 (376)
T 1v4v_A 284 -GL-QEEGAALGVPVVVLRNVTERPEGLKAG-ILKLAGT-D--PEGVYRVVKGLLENPEELSRMRKAK-----NPYGDGK 352 (376)
T ss_dssp -HH-HHHHHHTTCCEEECSSSCSCHHHHHHT-SEEECCS-C--HHHHHHHHHHHHTCHHHHHHHHHSC-----CSSCCSC
T ss_pred -CH-HHHHHHcCCCEEeccCCCcchhhhcCC-ceEECCC-C--HHHHHHHHHHHHhChHhhhhhcccC-----CCCCCCh
Confidence 44 88999999999987 578888887554 8999963 6 9999999999999999999998643 4477777
Q ss_pred HHHHHHHHHHHHHh
Q 011954 450 MSQRIALVLREVLQ 463 (474)
Q Consensus 450 ~~~~~~~~~~~~~~ 463 (474)
.++++.+.+.+++.
T Consensus 353 ~~~~i~~~i~~~~~ 366 (376)
T 1v4v_A 353 AGLMVARGVAWRLG 366 (376)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhc
Confidence 88888888888775
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.94 E-value=2.3e-27 Score=204.08 Aligned_cols=152 Identities=21% Similarity=0.272 Sum_probs=134.2
Q ss_pred cCCCCCCEEEEEecccccCcchHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHH--HcCCCCeE
Q 011954 264 LGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVA--EKKIQDHV 341 (474)
Q Consensus 264 ~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~--~~~l~~~v 341 (474)
+.++.++++|+|+|++.+.||++.+++++.++ ++++|+|+|+++ ..+.++++++ ++++.++|
T Consensus 17 ~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l-----------~~~~l~i~G~~~-----~~~~l~~~~~~~~~~l~~~v 80 (177)
T 2f9f_A 17 FKFKCYGDFWLSVNRIYPEKRIELQLEVFKKL-----------QDEKLYIVGWFS-----KGDHAERYARKIMKIAPDNV 80 (177)
T ss_dssp CCCCCCCSCEEEECCSSGGGTHHHHHHHHHHC-----------TTSCEEEEBCCC-----TTSTHHHHHHHHHHHSCTTE
T ss_pred cccCCCCCEEEEEeccccccCHHHHHHHHHhC-----------CCcEEEEEecCc-----cHHHHHHHHHhhhcccCCcE
Confidence 45667888999999999999999999999876 689999999986 3456777787 77888999
Q ss_pred EEecCCC--ChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCcceeeeeCCceeeecCCCCChHHHHHH
Q 011954 342 HFVNKTL--TVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANN 419 (474)
Q Consensus 342 ~~~g~~~--~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~ 419 (474)
+|+|+++ ++..+|+.||++|+||. .|++|++++|||+||+|||+++.++..|++.++.+|+++ ++| +++++++
T Consensus 81 ~~~g~~~~~e~~~~~~~adi~v~ps~--~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~g~~~-~~d--~~~l~~~ 155 (177)
T 2f9f_A 81 KFLGSVSEEELIDLYSRCKGLLCTAK--DEDFGLTPIEAMASGKPVIAVNEGGFKETVINEKTGYLV-NAD--VNEIIDA 155 (177)
T ss_dssp EEEESCCHHHHHHHHHHCSEEEECCS--SCCSCHHHHHHHHTTCCEEEESSHHHHHHCCBTTTEEEE-CSC--HHHHHHH
T ss_pred EEeCCCCHHHHHHHHHhCCEEEeCCC--cCCCChHHHHHHHcCCcEEEeCCCCHHHHhcCCCccEEe-CCC--HHHHHHH
Confidence 9999874 49999999999999998 899999999999999999999999999999999999999 777 9999999
Q ss_pred HHHHhhCHHH-HHHHHHH
Q 011954 420 IVKLATHVER-RLTMGKK 436 (474)
Q Consensus 420 i~~ll~~~~~-~~~~~~~ 436 (474)
|.++++|++. +++++++
T Consensus 156 i~~l~~~~~~~~~~~~~~ 173 (177)
T 2f9f_A 156 MKKVSKNPDKFKKDCFRR 173 (177)
T ss_dssp HHHHHHCTTTTHHHHHHH
T ss_pred HHHHHhCHHHHHHHHHHH
Confidence 9999998875 4444333
|
| >3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.1e-22 Score=197.08 Aligned_cols=344 Identities=15% Similarity=0.102 Sum_probs=203.2
Q ss_pred cccCEEEEEecCCCCCChhHHHHHHHHHHHhc-CcEEEEEeCCCCCC-chhhhhhcccchhccceeee------------
Q 011954 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGV-GAEVVWITNQKPNE-PDEVIYSLEHKMLDRGVQVL------------ 137 (474)
Q Consensus 72 ~~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~-G~~V~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~------------ 137 (474)
|+||||+++...-+ + -.....++++|++. |+++.++....... .......+.-. ....+.+.
T Consensus 23 ~~m~ki~~v~Gtr~--~-~~~~a~li~~l~~~~~~~~~~~~tG~h~~~~~~~~~~~~i~-~~~~l~~~~~~~~~~~~~~~ 98 (396)
T 3dzc_A 23 NAMKKVLIVFGTRP--E-AIKMAPLVQQLCQDNRFVAKVCVTGQHREMLDQVLELFSIT-PDFDLNIMEPGQTLNGVTSK 98 (396)
T ss_dssp -CCEEEEEEECSHH--H-HHHHHHHHHHHHHCTTEEEEEEECCSSSHHHHHHHHHTTCC-CSEECCCCCTTCCHHHHHHH
T ss_pred CCCCeEEEEEeccH--h-HHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhcCCC-CceeeecCCCCCCHHHHHHH
Confidence 55789999986432 1 13567889999886 78887555322211 11110000000 00011110
Q ss_pred ehhcHHHHhhhcCCCEEEEcccchhhHHhHHhhhcccccccceeeeeecccccc----chhhhhhcc--ccccccccccc
Q 011954 138 SAKGEKAINTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHY----FKLEYVKHL--PFVAGAMIDSY 211 (474)
Q Consensus 138 ~~~~~~~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~----~~~~~~~~~--~~~~~~~~~s~ 211 (474)
....+..+++..+||+||++......+....... . ...|++...+...... +.....+.+ ...+.+++.+.
T Consensus 99 ~~~~l~~~l~~~kPDvVi~~g~~~~~~~~~~aa~-~--~~IPv~h~~ag~rs~~~~~~~~~~~~r~~~~~~a~~~~~~se 175 (396)
T 3dzc_A 99 ILLGMQQVLSSEQPDVVLVHGDTATTFAASLAAY-Y--QQIPVGHVEAGLRTGNIYSPWPEEGNRKLTAALTQYHFAPTD 175 (396)
T ss_dssp HHHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHH-T--TTCCEEEETCCCCCSCTTSSTTHHHHHHHHHHTCSEEEESSH
T ss_pred HHHHHHHHHHhcCCCEEEEECCchhHHHHHHHHH-H--hCCCEEEEECCccccccccCCcHHHHHHHHHHhcCEEECCCH
Confidence 1123456667799999999875544332222111 1 2346554333221111 111111111 22233334343
Q ss_pred ccHHHHHHhHHHHhcCCCCCeEEEeCCC-CccccchhhhhHHHHHhHHHHHHhcC-CCC-CCEEEEEecccc-cCcchHH
Q 011954 212 TTAEYWKNRTRERLGIRMPETYVVHLGN-SKDLMDIAEDSVARRVLREHVRESLG-VRD-DDLLFAIINSVS-RGKGQDL 287 (474)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~ki~vi~ngv-d~~~~~~~~~~~~~~~~~~~~r~~~~-~~~-~~~~i~~vgrl~-~~Kg~~~ 287 (474)
.. ++.+. ..|++++++.+++|++ |...+.+... ......++++++++| ++. +++++++.+|.. ..|+++.
T Consensus 176 ~~----~~~l~-~~G~~~~ki~vvGn~~~d~~~~~~~~~-~~~~~~~~~~r~~lg~l~~~~~~vlv~~hR~~~~~~~~~~ 249 (396)
T 3dzc_A 176 TS----RANLL-QENYNAENIFVTGNTVIDALLAVREKI-HTDMDLQATLESQFPMLDASKKLILVTGHRRESFGGGFER 249 (396)
T ss_dssp HH----HHHHH-HTTCCGGGEEECCCHHHHHHHHHHHHH-HHCHHHHHHHHHTCTTCCTTSEEEEEECSCBCCCTTHHHH
T ss_pred HH----HHHHH-HcCCCcCcEEEECCcHHHHHHHhhhhc-ccchhhHHHHHHHhCccCCCCCEEEEEECCcccchhHHHH
Confidence 33 33333 4688888999999865 3222211110 000111367889999 444 445555566654 3578999
Q ss_pred HHHHHHHHHHHHHHhccCCCcEEEEEE-cCCCCcCchHHHHHHHHHHHcCCCCeEEEecCC--CChHHHHhcCCEEEEcC
Q 011954 288 FLHSFYESLQLIREKKLQVPSMHAVVV-GSDMNAQTKFETELRNFVAEKKIQDHVHFVNKT--LTVSPYLASIDVLVQNS 364 (474)
Q Consensus 288 ll~a~~~l~~~~~~~~~~~~~~~l~i~-G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~--~~~~~~~~~adv~v~ps 364 (474)
+++|+.++.+ ++|++++++. |.++ ...+.++++ ++..++|+++++. .++..+|+.||++|.+|
T Consensus 250 ll~A~~~l~~-------~~~~~~~v~~~g~~~----~~~~~l~~~---~~~~~~v~~~~~lg~~~~~~l~~~ad~vv~~S 315 (396)
T 3dzc_A 250 ICQALITTAE-------QHPECQILYPVHLNP----NVREPVNKL---LKGVSNIVLIEPQQYLPFVYLMDRAHIILTDS 315 (396)
T ss_dssp HHHHHHHHHH-------HCTTEEEEEECCBCH----HHHHHHHHH---TTTCTTEEEECCCCHHHHHHHHHHCSEEEESC
T ss_pred HHHHHHHHHH-------hCCCceEEEEeCCCh----HHHHHHHHH---HcCCCCEEEeCCCCHHHHHHHHHhcCEEEECC
Confidence 9999998865 4578999886 5442 234444443 3445689998875 57889999999999887
Q ss_pred CCCCCCCchHHHHHHhcCCCEEEc-CCCCcceeeeeCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHH
Q 011954 365 QARGECFGRITIEAMAFQLPVLGT-AAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKD 443 (474)
Q Consensus 365 ~~~~E~~~~~~~EAma~G~PvI~s-~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~ 443 (474)
| |+. +|||++|+|||++ +.++.+|++.+| .+++++. | ++++++++.++++|++.+++|++++..
T Consensus 316 -----G-g~~-~EA~a~G~PvV~~~~~~~~~e~v~~G-~~~lv~~-d--~~~l~~ai~~ll~d~~~~~~m~~~~~~---- 380 (396)
T 3dzc_A 316 -----G-GIQ-EEAPSLGKPVLVMRETTERPEAVAAG-TVKLVGT-N--QQQICDALSLLLTDPQAYQAMSQAHNP---- 380 (396)
T ss_dssp -----S-GGG-TTGGGGTCCEEECCSSCSCHHHHHHT-SEEECTT-C--HHHHHHHHHHHHHCHHHHHHHHTSCCT----
T ss_pred -----c-cHH-HHHHHcCCCEEEccCCCcchHHHHcC-ceEEcCC-C--HHHHHHHHHHHHcCHHHHHHHhhccCC----
Confidence 2 444 8999999999999 788888888776 6777765 5 899999999999999999999886543
Q ss_pred hcCHHHHHHHHHHHH
Q 011954 444 RFLEHHMSQRIALVL 458 (474)
Q Consensus 444 ~fs~~~~~~~~~~~~ 458 (474)
|.....++++.+++
T Consensus 381 -~~~~~aa~ri~~~l 394 (396)
T 3dzc_A 381 -YGDGKACQRIADIL 394 (396)
T ss_dssp -TCCSCHHHHHHHHH
T ss_pred -CcCChHHHHHHHHH
Confidence 44445555555543
|
| >3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=9.5e-22 Score=192.71 Aligned_cols=165 Identities=12% Similarity=0.092 Sum_probs=129.1
Q ss_pred CCCEEEEEecccccCcchHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCC
Q 011954 268 DDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKT 347 (474)
Q Consensus 268 ~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~ 347 (474)
++++++++.|++. .++.+.+.+++..+.+ .+.++++++++... .+.++ ++.++|++.|+.
T Consensus 241 ~~~~vlv~~G~~~-~~~~~~~~~~~~~l~~---------~~~~~~~~~g~~~~----~~~l~------~~~~~v~~~~~~ 300 (412)
T 3otg_A 241 ARPLVYLTLGTSS-GGTVEVLRAAIDGLAG---------LDADVLVASGPSLD----VSGLG------EVPANVRLESWV 300 (412)
T ss_dssp TSCEEEEECTTTT-CSCHHHHHHHHHHHHT---------SSSEEEEECCSSCC----CTTCC------CCCTTEEEESCC
T ss_pred CCCEEEEEcCCCC-cCcHHHHHHHHHHHHc---------CCCEEEEEECCCCC----hhhhc------cCCCcEEEeCCC
Confidence 4567888889986 6777777777766633 35677776665321 11111 245799999999
Q ss_pred CChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCC----cceeeeeCCceeeecCCCCChHHHHHHHHHH
Q 011954 348 LTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGG----TMEIVVNGTTGLLHPTGKEGVTPLANNIVKL 423 (474)
Q Consensus 348 ~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g----~~e~v~~~~~G~l~~~~d~~~~~la~~i~~l 423 (474)
++.++|+.||++|.++ .+.+++|||++|+|+|+.+.++ ..+.+.+..+|+++++++.|+++|+++|.++
T Consensus 301 -~~~~~l~~ad~~v~~~------g~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v~~~g~g~~~~~~~~~~~~l~~ai~~l 373 (412)
T 3otg_A 301 -PQAALLPHVDLVVHHG------GSGTTLGALGAGVPQLSFPWAGDSFANAQAVAQAGAGDHLLPDNISPDSVSGAAKRL 373 (412)
T ss_dssp -CHHHHGGGCSEEEESC------CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECCGGGCCHHHHHHHHHHH
T ss_pred -CHHHHHhcCcEEEECC------chHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEecCcccCCHHHHHHHHHHH
Confidence 8999999999999655 3579999999999999977654 5677778889999988722299999999999
Q ss_pred hhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 011954 424 ATHVERRLTMGKKGYERVKDRFLEHHMSQRIALVLRE 460 (474)
Q Consensus 424 l~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~ 460 (474)
++|++.+++|++.+++.... ++++++++.+++++.+
T Consensus 374 l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~ 409 (412)
T 3otg_A 374 LAEESYRAGARAVAAEIAAM-PGPDEVVRLLPGFASR 409 (412)
T ss_dssp HHCHHHHHHHHHHHHHHHHS-CCHHHHHTTHHHHHC-
T ss_pred HhCHHHHHHHHHHHHHHhcC-CCHHHHHHHHHHHhcc
Confidence 99999999999999887665 8999999999988754
|
| >3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.88 E-value=6.7e-21 Score=182.77 Aligned_cols=320 Identities=13% Similarity=0.052 Sum_probs=189.6
Q ss_pred ccCEEEEEecCCCCCChh-HHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhcccchhccceeeee-------------
Q 011954 73 KSKLVLLVSHELSLSGGP-LLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEHKMLDRGVQVLS------------- 138 (474)
Q Consensus 73 ~~~kIl~v~~~~~~gG~~-~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 138 (474)
|++||++... + .||- .-...++++|+++||+|.+++...+.+... +...++.+..
T Consensus 1 M~~~i~i~~G--G-TgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~--------v~~~g~~~~~i~~~~~~~~~~~~ 69 (365)
T 3s2u_A 1 MKGNVLIMAG--G-TGGHVFPALACAREFQARGYAVHWLGTPRGIENDL--------VPKAGLPLHLIQVSGLRGKGLKS 69 (365)
T ss_dssp --CEEEEECC--S-SHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHH--------TGGGTCCEEECC-----------
T ss_pred CCCcEEEEcC--C-CHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhch--------hhhcCCcEEEEECCCcCCCCHHH
Confidence 4678988652 1 1222 336789999999999999998654321110 1111111100
Q ss_pred -----------hhcHHHHhhhcCCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccccchhhhhhccccccccc
Q 011954 139 -----------AKGEKAINTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYFKLEYVKHLPFVAGAM 207 (474)
Q Consensus 139 -----------~~~~~~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~ 207 (474)
......+++..+||+|+++....+.....+.+ . ...|++ +|+..... ....+...++.+.+.
T Consensus 70 ~~~~~~~~~~~~~~~~~~l~~~~PDvVi~~g~~~s~p~~laA~--~--~~iP~v--ihe~n~~~-G~~nr~l~~~a~~v~ 142 (365)
T 3s2u_A 70 LVKAPLELLKSLFQALRVIRQLRPVCVLGLGGYVTGPGGLAAR--L--NGVPLV--IHEQNAVA-GTANRSLAPIARRVC 142 (365)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHCCSEEEECSSSTHHHHHHHHH--H--TTCCEE--EEECSSSC-CHHHHHHGGGCSEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCCcchHHHHHHHH--H--cCCCEE--EEecchhh-hhHHHhhccccceee
Confidence 01223456678999999987654432222111 1 123555 45432111 111111112222222
Q ss_pred ccccccHHHHHHhHHHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCE-EEEEecccccCcchH
Q 011954 208 IDSYTTAEYWKNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDL-LFAIINSVSRGKGQD 286 (474)
Q Consensus 208 ~~s~~~~~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~-~i~~vgrl~~~Kg~~ 286 (474)
..... .+ ...+++.++.|++..+.+.... ...+++.+++ ++++.|++...+..+
T Consensus 143 ~~~~~-----------~~-~~~~k~~~~g~pvr~~~~~~~~-------------~~~~~~~~~~~ilv~gGs~g~~~~~~ 197 (365)
T 3s2u_A 143 EAFPD-----------TF-PASDKRLTTGNPVRGELFLDAH-------------ARAPLTGRRVNLLVLGGSLGAEPLNK 197 (365)
T ss_dssp ESSTT-----------SS-CC---CEECCCCCCGGGCCCTT-------------SSCCCTTSCCEEEECCTTTTCSHHHH
T ss_pred ecccc-----------cc-cCcCcEEEECCCCchhhccchh-------------hhcccCCCCcEEEEECCcCCccccch
Confidence 21111 01 1345678888998877665332 2244555554 445557777777777
Q ss_pred HHHHHHHHHHHHHHHhccCCCcEEEE-EEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCCCChHHHHhcCCEEEEcCC
Q 011954 287 LFLHSFYESLQLIREKKLQVPSMHAV-VVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYLASIDVLVQNSQ 365 (474)
Q Consensus 287 ~ll~a~~~l~~~~~~~~~~~~~~~l~-i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv~v~ps~ 365 (474)
.+.+++.++.. ..+++++ ++|.+ ..+.+.+..++.+. ++.+.++.+++.++|+.||++|.-+
T Consensus 198 ~~~~al~~l~~--------~~~~~vi~~~G~~------~~~~~~~~~~~~~~--~~~v~~f~~dm~~~l~~aDlvI~ra- 260 (365)
T 3s2u_A 198 LLPEALAQVPL--------EIRPAIRHQAGRQ------HAEITAERYRTVAV--EADVAPFISDMAAAYAWADLVICRA- 260 (365)
T ss_dssp HHHHHHHTSCT--------TTCCEEEEECCTT------THHHHHHHHHHTTC--CCEEESCCSCHHHHHHHCSEEEECC-
T ss_pred hhHHHHHhccc--------ccceEEEEecCcc------ccccccceeccccc--ccccccchhhhhhhhccceEEEecC-
Confidence 78888876532 1344544 44544 45566666666664 6788899999999999999999432
Q ss_pred CCCCCCchHHHHHHhcCCCEEEcCCCCcc--------eeeeeCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHH
Q 011954 366 ARGECFGRITIEAMAFQLPVLGTAAGGTM--------EIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKG 437 (474)
Q Consensus 366 ~~~E~~~~~~~EAma~G~PvI~s~~~g~~--------e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~ 437 (474)
.+.++.|+|++|+|+|..+.+... +.+.+...|++++..+.+++.|+++|.++++|++.+++|++++
T Consensus 261 -----G~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~~G~a~~l~~~~~~~~~L~~~i~~ll~d~~~~~~m~~~a 335 (365)
T 3s2u_A 261 -----GALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRSGAGRLLPQKSTGAAELAAQLSEVLMHPETLRSMADQA 335 (365)
T ss_dssp -----CHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHTTTSEEECCTTTCCHHHHHHHHHHHHHCTHHHHHHHHHH
T ss_pred -----CcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHHCCCEEEeecCCCCHHHHHHHHHHHHCCHHHHHHHHHHH
Confidence 478999999999999988765431 2345566899988766558999999999999999999999999
Q ss_pred HHHHHHhcCHHHHHHHHHHHH
Q 011954 438 YERVKDRFLEHHMSQRIALVL 458 (474)
Q Consensus 438 ~~~~~~~fs~~~~~~~~~~~~ 458 (474)
++.... ...+++++.++++.
T Consensus 336 ~~~~~~-~aa~~ia~~i~~la 355 (365)
T 3s2u_A 336 RSLAKP-EATRTVVDACLEVA 355 (365)
T ss_dssp HHTCCT-THHHHHHHHHHHHC
T ss_pred HhcCCc-cHHHHHHHHHHHHH
Confidence 876543 34445555444443
|
| >3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.87 E-value=4.7e-22 Score=192.95 Aligned_cols=342 Identities=14% Similarity=0.130 Sum_probs=200.5
Q ss_pred cccCEEEEEecCCCCCChhHHHHHHHHHHHhc--CcEEEEEeCCCCC-Cchhhhhhcccchhccceee------------
Q 011954 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGV--GAEVVWITNQKPN-EPDEVIYSLEHKMLDRGVQV------------ 136 (474)
Q Consensus 72 ~~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~--G~~V~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~------------ 136 (474)
|++|||+++...-+ + -.....++++|++. |+++.++...... ........+.-. ....+.+
T Consensus 25 m~~~kI~~v~Gtr~--~-~~~~a~li~~l~~~~~~~~~~~~~tG~h~~m~~~~~~~~~i~-~~~~l~v~~~~~~~~~~~~ 100 (403)
T 3ot5_A 25 MAKIKVMSIFGTRP--E-AIKMAPLVLALEKEPETFESTVVITAQHREMLDQVLEIFDIK-PDIDLDIMKKGQTLAEITS 100 (403)
T ss_dssp -CCEEEEEEECSHH--H-HHHHHHHHHHHHTCTTTEEEEEEECC-----CHHHHHHTTCC-CSEECCCCC-CCCHHHHHH
T ss_pred cccceEEEEEecCh--h-HHHHHHHHHHHHhCCCCCcEEEEEecCcHHHHHHHHHhcCCC-CCcccccCCCCCCHHHHHH
Confidence 55679999985432 1 13467889999887 6887755532211 111111111100 0000111
Q ss_pred eehhcHHHHhhhcCCCEEEEcccchhhHHhHHhhhcccccccceeeeeecccc--cc--chh-hhhhcccc-cccccccc
Q 011954 137 LSAKGEKAINTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRG--HY--FKL-EYVKHLPF-VAGAMIDS 210 (474)
Q Consensus 137 ~~~~~~~~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~--~~--~~~-~~~~~~~~-~~~~~~~s 210 (474)
.....+..+++..+||+||+++.....+....... . ...|++....+... .+ +.. ..+..+.. .+.+++.+
T Consensus 101 ~~~~~l~~~l~~~kPD~Vi~~gd~~~~l~~~laA~-~--~~IPv~h~~aglrs~~~~~~~p~~~~r~~~~~~a~~~~~~s 177 (403)
T 3ot5_A 101 RVMNGINEVIAAENPDIVLVHGDTTTSFAAGLATF-Y--QQKMLGHVEAGLRTWNKYSPFPEEMNRQLTGVMADIHFSPT 177 (403)
T ss_dssp HHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHH-H--TTCEEEEESCCCCCSCTTSSTTHHHHHHHHHHHCSEEEESS
T ss_pred HHHHHHHHHHHHcCCCEEEEECCchhHHHHHHHHH-H--hCCCEEEEECCccccccccCCcHHHHHHHHHHhcCEEECCC
Confidence 01123456667799999999875433332221111 1 22455432222211 10 111 11111111 22233333
Q ss_pred cccHHHHHHhHHHHhcCCCCCeEEEeCCC-CccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEeccccc-CcchHHH
Q 011954 211 YTTAEYWKNRTRERLGIRMPETYVVHLGN-SKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSR-GKGQDLF 288 (474)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~ki~vi~ngv-d~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~-~Kg~~~l 288 (474)
... ++.+. ..|++++++.+++|++ |...+.+.... +.+.++++ +++++++++.||... .|+++.+
T Consensus 178 e~~----~~~l~-~~Gi~~~~i~vvGn~~~D~~~~~~~~~~------~~~~~~~l--~~~~~vlv~~~r~~~~~~~l~~l 244 (403)
T 3ot5_A 178 KQA----KENLL-AEGKDPATIFVTGNTAIDALKTTVQKDY------HHPILENL--GDNRLILMTAHRRENLGEPMQGM 244 (403)
T ss_dssp HHH----HHHHH-HTTCCGGGEEECCCHHHHHHHHHSCTTC------CCHHHHSC--TTCEEEEECCCCHHHHTTHHHHH
T ss_pred HHH----HHHHH-HcCCCcccEEEeCCchHHHHHhhhhhhc------chHHHHhc--cCCCEEEEEeCcccccCcHHHHH
Confidence 333 33332 4688888999999854 43333221100 11334444 455566777777644 4789999
Q ss_pred HHHHHHHHHHHHHhccCCCcEEEEEE-cCCCCcCchHHHHHHHHHHHcCCCCeEEEecCCC--ChHHHHhcCCEEEEcCC
Q 011954 289 LHSFYESLQLIREKKLQVPSMHAVVV-GSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTL--TVSPYLASIDVLVQNSQ 365 (474)
Q Consensus 289 l~a~~~l~~~~~~~~~~~~~~~l~i~-G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~--~~~~~~~~adv~v~ps~ 365 (474)
++|+.++.+ ++|++++++. |.++ ...+.++++ ++..++|+++++.. ++..+|+.||++|.+|
T Consensus 245 l~a~~~l~~-------~~~~~~~v~~~~~~~----~~~~~l~~~---~~~~~~v~l~~~l~~~~~~~l~~~ad~vv~~S- 309 (403)
T 3ot5_A 245 FEAVREIVE-------SREDTELVYPMHLNP----AVREKAMAI---LGGHERIHLIEPLDAIDFHNFLRKSYLVFTDS- 309 (403)
T ss_dssp HHHHHHHHH-------HCTTEEEEEECCSCH----HHHHHHHHH---HTTCTTEEEECCCCHHHHHHHHHHEEEEEECC-
T ss_pred HHHHHHHHH-------hCCCceEEEecCCCH----HHHHHHHHH---hCCCCCEEEeCCCCHHHHHHHHHhcCEEEECC-
Confidence 999998876 4588999887 4432 123334333 34446899999864 8999999999999766
Q ss_pred CCCCCCchHHHHHHhcCCCEEEc-CCCCcceeeeeCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHh
Q 011954 366 ARGECFGRITIEAMAFQLPVLGT-AAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKDR 444 (474)
Q Consensus 366 ~~~E~~~~~~~EAma~G~PvI~s-~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~ 444 (474)
|...+|||++|+|+|++ +.++.+|.+..| +|++++. | ++++++++.++++|++.+++|++++..
T Consensus 310 ------Gg~~~EA~a~g~PvV~~~~~~~~~e~v~~g-~~~lv~~-d--~~~l~~ai~~ll~~~~~~~~m~~~~~~----- 374 (403)
T 3ot5_A 310 ------GGVQEEAPGMGVPVLVLRDTTERPEGIEAG-TLKLIGT-N--KENLIKEALDLLDNKESHDKMAQAANP----- 374 (403)
T ss_dssp ------HHHHHHGGGTTCCEEECCSSCSCHHHHHHT-SEEECCS-C--HHHHHHHHHHHHHCHHHHHHHHHSCCT-----
T ss_pred ------ccHHHHHHHhCCCEEEecCCCcchhheeCC-cEEEcCC-C--HHHHHHHHHHHHcCHHHHHHHHhhcCc-----
Confidence 23348999999999999 678888888655 8888876 5 899999999999999999999876543
Q ss_pred cCHHHHHHHHHHHHHHHHh
Q 011954 445 FLEHHMSQRIALVLREVLQ 463 (474)
Q Consensus 445 fs~~~~~~~~~~~~~~~~~ 463 (474)
|.....++++.+++.+.+.
T Consensus 375 ~g~~~aa~rI~~~l~~~l~ 393 (403)
T 3ot5_A 375 YGDGFAANRILAAIKSHFE 393 (403)
T ss_dssp TCCSCHHHHHHHHHHHHHT
T ss_pred ccCCcHHHHHHHHHHHHhC
Confidence 4444555556666666554
|
| >3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.3e-20 Score=177.29 Aligned_cols=301 Identities=11% Similarity=0.040 Sum_probs=191.6
Q ss_pred CEEEEEecCC--CCCChhHHHHHHHHHHHhcCcEEEEEeCCCC-CCchhhhhhcccchhccceeeeehhcHHHHhhhcCC
Q 011954 75 KLVLLVSHEL--SLSGGPLLLMELAFLLRGVGAEVVWITNQKP-NEPDEVIYSLEHKMLDRGVQVLSAKGEKAINTALNA 151 (474)
Q Consensus 75 ~kIl~v~~~~--~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (474)
|++-+.+.+- ...++...-....+-+.+.|++..-+..... ..... .+...+. ..+....++
T Consensus 11 m~~~i~~~~~~~~~~a~~ka~~dv~~i~~~~G~~~l~~~~~~~~~~~~~---~~~~~~~------------~~~~~~~~~ 75 (339)
T 3rhz_A 11 MRVYITNINGQSIQSTAQLCQNTVTDVAVSLGYRELGIYCYQIHTDSES---ELSKRLD------------GIVAGLRHG 75 (339)
T ss_dssp CCEEEEEEESSCTTCHHHHHHHHHHHHHHHTTCEEEEEECCCGGGSCHH---HHHHHHH------------HHTTTCCTT
T ss_pred hheeeecccCccccchHHHHHHHHHHHHHHCCCeEEEeeccccccccHH---HHHHHHH------------HHHhcCCCC
Confidence 4544444332 2234456566666777788997655542211 11000 0111110 112234789
Q ss_pred CEEEEcccchh-h-HHhHHhhhcccccccceeeeeeccccccchh------hhhhcccccccccccccccHHHHHHhHHH
Q 011954 152 DLVVLNTAVAG-K-WLDGVLKDKVSQVLPKVLWWIHEMRGHYFKL------EYVKHLPFVAGAMIDSYTTAEYWKNRTRE 223 (474)
Q Consensus 152 DiV~~~~~~~~-~-~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~------~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 223 (474)
|+|+.++|... . +....+. .+.....+++..+|++....+.. .....++.+|.+++.|..+.+++.+
T Consensus 76 DvIi~q~P~~~~~~~~~~~~~-~lk~~~~k~i~~ihDl~pl~~~~~~~~~~~E~~~y~~aD~Ii~~S~~~~~~l~~---- 150 (339)
T 3rhz_A 76 DVVIFQTPTWNTTEFDEKLMN-KLKLYDIKIVLFIHDVVPLMFSGNFYLMDRTIAYYNKADVVVAPSQKMIDKLRD---- 150 (339)
T ss_dssp CEEEEEECCSSCHHHHHHHHH-HHTTSSCEEEEEESCCHHHHCGGGGGGHHHHHHHHTTCSEEEESCHHHHHHHHH----
T ss_pred CEEEEeCCCcchhhHHHHHHH-HHHhcCCEEEEEecccHHhhCccchhhHHHHHHHHHHCCEEEECCHHHHHHHHH----
Confidence 99999887531 1 2122222 22223579999999986543221 1234457778888888877766553
Q ss_pred HhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHHHHHHHHHHHHHHHHhc
Q 011954 224 RLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKK 303 (474)
Q Consensus 224 ~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~ 303 (474)
.|++..++.++++. |... +.+ ...+.++++|+|+|++.....+.. +
T Consensus 151 -~G~~~~ki~~~~~~-~~~~--~~~---------------~~~~~~~~~i~yaG~l~k~~~L~~----l----------- 196 (339)
T 3rhz_A 151 -FGMNVSKTVVQGMW-DHPT--QAP---------------MFPAGLKREIHFPGNPERFSFVKE----W----------- 196 (339)
T ss_dssp -TTCCCSEEEECCSC-CCCC--CCC---------------CCCCEEEEEEEECSCTTTCGGGGG----C-----------
T ss_pred -cCCCcCceeecCCC-CccC--ccc---------------ccccCCCcEEEEeCCcchhhHHHh----C-----------
Confidence 47766666444332 2110 000 012245688999999985332221 1
Q ss_pred cCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCC--CChHHHHhcCCEEEEcCCC-----CCCCCchHHH
Q 011954 304 LQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKT--LTVSPYLASIDVLVQNSQA-----RGECFGRITI 376 (474)
Q Consensus 304 ~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~--~~~~~~~~~adv~v~ps~~-----~~E~~~~~~~ 376 (474)
.++++|+|+|+|+.. .++ +|+|+|++ +++..+|+.+|+.++.... ....+|.+++
T Consensus 197 --~~~~~f~ivG~G~~~---------------~l~-nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~ 258 (339)
T 3rhz_A 197 --KYDIPLKVYTWQNVE---------------LPQ-NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLG 258 (339)
T ss_dssp --CCSSCEEEEESCCCC---------------CCT-TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHH
T ss_pred --CCCCeEEEEeCCccc---------------CcC-CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHH
Confidence 178999999999721 244 89999975 8899999888888876210 0135699999
Q ss_pred HHHhcCCCEEEcCCCCcceeeeeCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHH
Q 011954 377 EAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRFLEHHMSQRI 454 (474)
Q Consensus 377 EAma~G~PvI~s~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~ 454 (474)
||||||+|||+++.++..|++.++.+|+++++ .++++++|..+ +++.+++|++++++.+++ +++..+.++.
T Consensus 259 eymA~G~PVI~~~~~~~~~~v~~~~~G~~~~~----~~e~~~~i~~l--~~~~~~~m~~na~~~a~~-~~~~~f~k~~ 329 (339)
T 3rhz_A 259 SFLAAGIPVIVQEGIANQELIENNGLGWIVKD----VEEAIMKVKNV--NEDEYIELVKNVRSFNPI-LRKGFFTRRL 329 (339)
T ss_dssp HHHHHTCCEEEETTCTTTHHHHHHTCEEEESS----HHHHHHHHHHC--CHHHHHHHHHHHHHHTHH-HHTTHHHHHH
T ss_pred HHHHcCCCEEEccChhHHHHHHhCCeEEEeCC----HHHHHHHHHHh--CHHHHHHHHHHHHHHHHH-hhccHHHHHH
Confidence 99999999999999999999999999999973 88999999886 467799999999987655 7777776653
|
| >2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.1e-19 Score=178.97 Aligned_cols=168 Identities=13% Similarity=0.141 Sum_probs=121.5
Q ss_pred CCCEEEEEecccccCcchHHHHHHHHHHHHHHHHhccCCCcEEE-EEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecC
Q 011954 268 DDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHA-VVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNK 346 (474)
Q Consensus 268 ~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l-~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~ 346 (474)
++.++++++|++. .++.+.+.+++..+. +.+++++ +++|+++. .+.++ .+.++|.+.|+
T Consensus 231 ~~~~v~v~~Gs~~-~~~~~~~~~~~~~l~--------~~~~~~~~~~~G~~~~-----~~~l~------~~~~~v~~~~~ 290 (430)
T 2iyf_A 231 AEKVVLVSLGSAF-TKQPAFYRECVRAFG--------NLPGWHLVLQIGRKVT-----PAELG------ELPDNVEVHDW 290 (430)
T ss_dssp CSEEEEEECTTTC-C-CHHHHHHHHHHHT--------TCTTEEEEEECC---C-----GGGGC------SCCTTEEEESS
T ss_pred CCCeEEEEcCCCC-CCcHHHHHHHHHHHh--------cCCCeEEEEEeCCCCC-----hHHhc------cCCCCeEEEec
Confidence 3457888999998 455454444443331 1146787 57887742 22221 24578999999
Q ss_pred CCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCC----cceeeeeCCceeeecCCCCChHHHHHHHHH
Q 011954 347 TLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGG----TMEIVVNGTTGLLHPTGKEGVTPLANNIVK 422 (474)
Q Consensus 347 ~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g----~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ 422 (474)
..+. ++|+.||++|..+ .+.+++|||++|+|+|+++.++ ..+.+.+...|++++.++.++++|+++|.+
T Consensus 291 ~~~~-~~l~~ad~~v~~~------G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~i~~ 363 (430)
T 2iyf_A 291 VPQL-AILRQADLFVTHA------GAGGSQEGLATATPMIAVPQAVDQFGNADMLQGLGVARKLATEEATADLLRETALA 363 (430)
T ss_dssp CCHH-HHHTTCSEEEECC------CHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEECCCC-CCHHHHHHHHHH
T ss_pred CCHH-HHhhccCEEEECC------CccHHHHHHHhCCCEEECCCccchHHHHHHHHHcCCEEEcCCCCCCHHHHHHHHHH
Confidence 8777 8999999999654 2479999999999999998765 355566777899998773238999999999
Q ss_pred HhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Q 011954 423 LATHVERRLTMGKKGYERVKDRFLEHHMSQRIALVLREVLQ 463 (474)
Q Consensus 423 ll~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~ 463 (474)
+++|++.++++++.+++.... ++++++++.+++++++...
T Consensus 364 ll~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~ 403 (430)
T 2iyf_A 364 LVDDPEVARRLRRIQAEMAQE-GGTRRAADLIEAELPARHE 403 (430)
T ss_dssp HHHCHHHHHHHHHHHHHHHHH-CHHHHHHHHHHTTSCC---
T ss_pred HHcCHHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHhhcccc
Confidence 999999999999998887655 8999999999888766543
|
| >4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=7e-21 Score=185.60 Aligned_cols=158 Identities=12% Similarity=0.089 Sum_probs=108.7
Q ss_pred CCCEEEEEecccccCc----------chHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCC
Q 011954 268 DDDLLFAIINSVSRGK----------GQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKI 337 (474)
Q Consensus 268 ~~~~~i~~vgrl~~~K----------g~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l 337 (474)
+++.+++++|++...| .++.+++++.+ .+++++++|++. ..+.+. .+
T Consensus 226 ~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~------------~~~~~v~~~~~~-----~~~~l~------~~ 282 (398)
T 4fzr_A 226 KQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPK------------LGFEVVVAVSDK-----LAQTLQ------PL 282 (398)
T ss_dssp SSCEEECC----------------CCSHHHHHHHGGG------------GTCEEEECCCC-------------------C
T ss_pred CCCEEEEEccCcccccccccccchHHHHHHHHHHHHh------------CCCEEEEEeCCc-----chhhhc------cC
Confidence 4567888889997555 34555555532 367888888774 222222 24
Q ss_pred CCeEEEecCCCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcC----CCCcceeeeeCCceeeecCCCCCh
Q 011954 338 QDHVHFVNKTLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTA----AGGTMEIVVNGTTGLLHPTGKEGV 413 (474)
Q Consensus 338 ~~~v~~~g~~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~----~~g~~e~v~~~~~G~l~~~~d~~~ 413 (474)
.++|++.|+. ++.+++..||++|. .+.+.+++|||++|+|+|+.. ..+..+.+.+...|++++.++.++
T Consensus 283 ~~~v~~~~~~-~~~~ll~~ad~~v~------~gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~ 355 (398)
T 4fzr_A 283 PEGVLAAGQF-PLSAIMPACDVVVH------HGGHGTTLTCLSEGVPQVSVPVIAEVWDSARLLHAAGAGVEVPWEQAGV 355 (398)
T ss_dssp CTTEEEESCC-CHHHHGGGCSEEEE------CCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHTTSEEECC------
T ss_pred CCcEEEeCcC-CHHHHHhhCCEEEe------cCCHHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEecCcccCCH
Confidence 5799999998 68999999999993 445789999999999999954 446677777888999998773238
Q ss_pred HHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Q 011954 414 TPLANNIVKLATHVERRLTMGKKGYERVKDRFLEHHMSQRIAL 456 (474)
Q Consensus 414 ~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~ 456 (474)
++|+++|.++++|++.+++|++.+++.... .+++++++.+++
T Consensus 356 ~~l~~ai~~ll~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~ 397 (398)
T 4fzr_A 356 ESVLAACARIRDDSSYVGNARRLAAEMATL-PTPADIVRLIEQ 397 (398)
T ss_dssp -CHHHHHHHHHHCTHHHHHHHHHHHHHTTS-CCHHHHHHHHTC
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHHcC-CCHHHHHHHHhc
Confidence 999999999999999999999988876544 899988887653
|
| >3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=1.2e-19 Score=176.36 Aligned_cols=163 Identities=9% Similarity=0.094 Sum_probs=124.3
Q ss_pred CCCEEEEEecccccCcch-HHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecC
Q 011954 268 DDDLLFAIINSVSRGKGQ-DLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNK 346 (474)
Q Consensus 268 ~~~~~i~~vgrl~~~Kg~-~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~ 346 (474)
+++.++++.|+....|+. ..+++++.+. + +.|+++++++|+++ ..+.+. ++.++|++.|+
T Consensus 217 ~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~-------~~p~~~~v~~~~~~-----~~~~l~------~~~~~v~~~~~ 277 (391)
T 3tsa_A 217 SARRVCICMGRMVLNATGPAPLLRAVAAA-T-------ELPGVEAVIAVPPE-----HRALLT------DLPDNARIAES 277 (391)
T ss_dssp SSEEEEEECCHHHHHHHCSHHHHHHHHHH-H-------TSTTEEEEEECCGG-----GGGGCT------TCCTTEEECCS
T ss_pred CCCEEEEEcCCCCCcccchHHHHHHHHHh-c-------cCCCeEEEEEECCc-----chhhcc------cCCCCEEEecc
Confidence 345677778998775555 6777777665 4 45789999998874 222221 34578999998
Q ss_pred CCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCC----CCcceeeeeCCceeeecC----CCCChHHHHH
Q 011954 347 TLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAA----GGTMEIVVNGTTGLLHPT----GKEGVTPLAN 418 (474)
Q Consensus 347 ~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~----~g~~e~v~~~~~G~l~~~----~d~~~~~la~ 418 (474)
. +..+++..||++|. ++.+.+++|||++|+|+|+... .+..+.+.+...|+++++ .+ +++|++
T Consensus 278 ~-~~~~ll~~ad~~v~------~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~~--~~~l~~ 348 (391)
T 3tsa_A 278 V-PLNLFLRTCELVIC------AGGSGTAFTATRLGIPQLVLPQYFDQFDYARNLAAAGAGICLPDEQAQSD--HEQFTD 348 (391)
T ss_dssp C-CGGGTGGGCSEEEE------CCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTTSEEECCSHHHHTC--HHHHHH
T ss_pred C-CHHHHHhhCCEEEe------CCCHHHHHHHHHhCCCEEecCCcccHHHHHHHHHHcCCEEecCcccccCC--HHHHHH
Confidence 7 46678899999994 4456799999999999999644 345666777889999988 55 999999
Q ss_pred HHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 011954 419 NIVKLATHVERRLTMGKKGYERVKDRFLEHHMSQRIALVLR 459 (474)
Q Consensus 419 ~i~~ll~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~ 459 (474)
++.++++|++.+++|++.+++.. +..+++++++.++++..
T Consensus 349 ai~~ll~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~ 388 (391)
T 3tsa_A 349 SIATVLGDTGFAAAAIKLSDEIT-AMPHPAALVRTLENTAA 388 (391)
T ss_dssp HHHHHHTCTHHHHHHHHHHHHHH-TSCCHHHHHHHHHHC--
T ss_pred HHHHHHcCHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHh
Confidence 99999999999999988887765 44899888887776543
|
| >3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=2e-18 Score=168.18 Aligned_cols=159 Identities=16% Similarity=0.094 Sum_probs=120.7
Q ss_pred CCCEEEEEecccccC-cchHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecC
Q 011954 268 DDDLLFAIINSVSRG-KGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNK 346 (474)
Q Consensus 268 ~~~~~i~~vgrl~~~-Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~ 346 (474)
+++.+++++|++... ++.+.+.+++..+.+ .+++++++|+++. .+.+. ++.++|.+.|+
T Consensus 231 ~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~---------~~~~~v~~~g~~~-----~~~l~------~~~~~v~~~~~ 290 (398)
T 3oti_A 231 ARPEVAITMGTIELQAFGIGAVEPIIAAAGE---------VDADFVLALGDLD-----ISPLG------TLPRNVRAVGW 290 (398)
T ss_dssp SSCEEEECCTTTHHHHHCGGGHHHHHHHHHT---------SSSEEEEECTTSC-----CGGGC------SCCTTEEEESS
T ss_pred CCCEEEEEcCCCccccCcHHHHHHHHHHHHc---------CCCEEEEEECCcC-----hhhhc------cCCCcEEEEcc
Confidence 455788889999665 466666665555532 4688999988752 11111 34679999999
Q ss_pred CCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEE----cCCCCcc--eeeeeCCceeeecCCCCChHHHHHHH
Q 011954 347 TLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLG----TAAGGTM--EIVVNGTTGLLHPTGKEGVTPLANNI 420 (474)
Q Consensus 347 ~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~----s~~~g~~--e~v~~~~~G~l~~~~d~~~~~la~~i 420 (474)
. ++.++|..||++|. .+.+.+++|||++|+|+|+ .+.++.. +.+.+...|+++++.+.+.+.++
T Consensus 291 ~-~~~~ll~~ad~~v~------~~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~~~g~g~~~~~~~~~~~~l~--- 360 (398)
T 3oti_A 291 T-PLHTLLRTCTAVVH------HGGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSRRGIGLVSTSDKVDADLLR--- 360 (398)
T ss_dssp C-CHHHHHTTCSEEEE------CCCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHHHHHTSEEECCGGGCCHHHHH---
T ss_pred C-CHHHHHhhCCEEEE------CCCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHHHHCCCEEeeCCCCCCHHHHH---
Confidence 9 89999999999994 4456799999999999999 5567777 88888889999987642355555
Q ss_pred HHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 011954 421 VKLATHVERRLTMGKKGYERVKDRFLEHHMSQRIALVL 458 (474)
Q Consensus 421 ~~ll~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~ 458 (474)
++++|++.+++|++.+++.. +..+++.+++.+++++
T Consensus 361 -~ll~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~l~ 396 (398)
T 3oti_A 361 -RLIGDESLRTAAREVREEMV-ALPTPAETVRRIVERI 396 (398)
T ss_dssp -HHHHCHHHHHHHHHHHHHHH-TSCCHHHHHHHHHHHH
T ss_pred -HHHcCHHHHHHHHHHHHHHH-hCCCHHHHHHHHHHHh
Confidence 88899999999988888755 4589999998887764
|
| >3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} | Back alignment and structure |
|---|
Probab=99.80 E-value=2.4e-18 Score=167.89 Aligned_cols=164 Identities=13% Similarity=0.115 Sum_probs=116.8
Q ss_pred CCCEEEEEecccccCcchHHHHHHHHHHHHHHHHhccCCCcEEEEE-EcCCCCcCchHHHHHHHHHHHcCCCCeEEEecC
Q 011954 268 DDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVV-VGSDMNAQTKFETELRNFVAEKKIQDHVHFVNK 346 (474)
Q Consensus 268 ~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~i-~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~ 346 (474)
+.+.++++.|+....+. +.+.+++..+. + .++++++ +|++.. .+.++ .+.++|++.|+
T Consensus 230 ~~~~v~v~~G~~~~~~~-~~~~~~~~~~~--------~-~~~~~~~~~g~~~~-----~~~~~------~~~~~v~~~~~ 288 (402)
T 3ia7_A 230 DAPVLLVSLGNQFNEHP-EFFRACAQAFA--------D-TPWHVVMAIGGFLD-----PAVLG------PLPPNVEAHQW 288 (402)
T ss_dssp TCCEEEEECCSCSSCCH-HHHHHHHHHHT--------T-SSCEEEEECCTTSC-----GGGGC------SCCTTEEEESC
T ss_pred CCCEEEEECCCCCcchH-HHHHHHHHHHh--------c-CCcEEEEEeCCcCC-----hhhhC------CCCCcEEEecC
Confidence 45678888898866542 22322222221 1 2356655 565431 11111 24578999999
Q ss_pred CCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCC-----CCcceeeeeCCceeeecCCCCChHHHHHHHH
Q 011954 347 TLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAA-----GGTMEIVVNGTTGLLHPTGKEGVTPLANNIV 421 (474)
Q Consensus 347 ~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~-----~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~ 421 (474)
..+. ++|..||++|..+ ...+++|||++|+|+|+... .+..+.+.+...|..++.++.+++++++++.
T Consensus 289 ~~~~-~ll~~ad~~v~~~------G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~~~ 361 (402)
T 3ia7_A 289 IPFH-SVLAHARACLTHG------TTGAVLEAFAAGVPLVLVPHFATEAAPSAERVIELGLGSVLRPDQLEPASIREAVE 361 (402)
T ss_dssp CCHH-HHHTTEEEEEECC------CHHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHHTTSEEECCGGGCSHHHHHHHHH
T ss_pred CCHH-HHHhhCCEEEECC------CHHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHHcCCEEEccCCCCCHHHHHHHHH
Confidence 8777 9999999999554 34789999999999996544 3556667778899999876323899999999
Q ss_pred HHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 011954 422 KLATHVERRLTMGKKGYERVKDRFLEHHMSQRIALVLRE 460 (474)
Q Consensus 422 ~ll~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~ 460 (474)
++++|++.++++++.+++.. +..+++++++.+++++.+
T Consensus 362 ~ll~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~ 399 (402)
T 3ia7_A 362 RLAADSAVRERVRRMQRDIL-SSGGPARAADEVEAYLGR 399 (402)
T ss_dssp HHHHCHHHHHHHHHHHHHHH-TSCHHHHHHHHHHHHHHH
T ss_pred HHHcCHHHHHHHHHHHHHHh-hCChHHHHHHHHHHHHhh
Confidence 99999999999988777654 458888888888887754
|
| >3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=4.4e-17 Score=159.59 Aligned_cols=164 Identities=13% Similarity=0.077 Sum_probs=114.7
Q ss_pred CCCEEEEEecccccCcchHHHHHHHHHHHHHHHHhccCCCcEEEEE-EcCCCCcCchHHHHHHHHHHHcCCCCeEEEecC
Q 011954 268 DDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVV-VGSDMNAQTKFETELRNFVAEKKIQDHVHFVNK 346 (474)
Q Consensus 268 ~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~i-~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~ 346 (474)
+.+.++++.|+.....+ +.+...+..+ + + .++++++ +|+++. .+.++ .+.++|++.++
T Consensus 246 ~~~~v~v~~Gs~~~~~~-~~~~~~~~al-~-------~-~~~~~v~~~g~~~~-----~~~l~------~~~~~v~~~~~ 304 (415)
T 3rsc_A 246 DLPVVLVSLGTTFNDRP-GFFRDCARAF-D-------G-QPWHVVMTLGGQVD-----PAALG------DLPPNVEAHRW 304 (415)
T ss_dssp CCCEEEEECTTTSCCCH-HHHHHHHHHH-T-------T-SSCEEEEECTTTSC-----GGGGC------CCCTTEEEESC
T ss_pred CCCEEEEECCCCCCChH-HHHHHHHHHH-h-------c-CCcEEEEEeCCCCC-----hHHhc------CCCCcEEEEec
Confidence 45678888898754432 2222222222 1 1 2377776 665531 11111 34578999999
Q ss_pred CCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCC----CCcceeeeeCCceeeecCCCCChHHHHHHHHH
Q 011954 347 TLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAA----GGTMEIVVNGTTGLLHPTGKEGVTPLANNIVK 422 (474)
Q Consensus 347 ~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~----~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ 422 (474)
..+. +++..||++|..+ ...+++|||++|+|+|+... ....+.+.+...|..++.++-++++++++|.+
T Consensus 305 ~~~~-~ll~~ad~~v~~~------G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~~g~g~~~~~~~~~~~~l~~~i~~ 377 (415)
T 3rsc_A 305 VPHV-KVLEQATVCVTHG------GMGTLMEALYWGRPLVVVPQSFDVQPMARRVDQLGLGAVLPGEKADGDTLLAAVGA 377 (415)
T ss_dssp CCHH-HHHHHEEEEEESC------CHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHHTCEEECCGGGCCHHHHHHHHHH
T ss_pred CCHH-HHHhhCCEEEECC------cHHHHHHHHHhCCCEEEeCCcchHHHHHHHHHHcCCEEEcccCCCCHHHHHHHHHH
Confidence 8766 9999999999544 34689999999999999543 33455666677888887763238999999999
Q ss_pred HhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 011954 423 LATHVERRLTMGKKGYERVKDRFLEHHMSQRIALVLRE 460 (474)
Q Consensus 423 ll~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~ 460 (474)
+++|++.++++.+.+.+... ..+++++++.+++++.+
T Consensus 378 ll~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~ 414 (415)
T 3rsc_A 378 VAADPALLARVEAMRGHVRR-AGGAARAADAVEAYLAR 414 (415)
T ss_dssp HHTCHHHHHHHHHHHHHHHH-SCHHHHHHHHHHHHHHH
T ss_pred HHcCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHhhc
Confidence 99999999999887777554 48888888888777653
|
| >2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.70 E-value=3.6e-15 Score=144.40 Aligned_cols=159 Identities=13% Similarity=0.087 Sum_probs=116.4
Q ss_pred CCCEEEEEecccccC-------cchHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCe
Q 011954 268 DDDLLFAIINSVSRG-------KGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDH 340 (474)
Q Consensus 268 ~~~~~i~~vgrl~~~-------Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~ 340 (474)
+...+++++|++... +.++.+++++.+ .+++++++++++ ..+.++. ++++
T Consensus 209 ~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~------------~~~~~~~~~g~~-----~~~~l~~------~~~~ 265 (384)
T 2p6p_A 209 TRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVR------------WDVELIVAAPDT-----VAEALRA------EVPQ 265 (384)
T ss_dssp SSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHT------------TTCEEEEECCHH-----HHHHHHH------HCTT
T ss_pred CCCEEEEECCCCCccccccccHHHHHHHHHHHhc------------CCcEEEEEeCCC-----CHHhhCC------CCCc
Confidence 345788899999875 566677777643 367888876542 2333332 2468
Q ss_pred EEEecCCCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCC----cceeeeeCCceeeecCCCCChHHH
Q 011954 341 VHFVNKTLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGG----TMEIVVNGTTGLLHPTGKEGVTPL 416 (474)
Q Consensus 341 v~~~g~~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g----~~e~v~~~~~G~l~~~~d~~~~~l 416 (474)
|.+ |+. +..++|..||++|..+ .+.+++|||++|+|+|+.+..+ ..+.+.+...|+.++..+.+++++
T Consensus 266 v~~-~~~-~~~~~l~~~d~~v~~~------G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~~~~g~g~~~~~~~~~~~~l 337 (384)
T 2p6p_A 266 ARV-GWT-PLDVVAPTCDLLVHHA------GGVSTLTGLSAGVPQLLIPKGSVLEAPARRVADYGAAIALLPGEDSTEAI 337 (384)
T ss_dssp SEE-ECC-CHHHHGGGCSEEEECS------CTTHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEECCTTCCCHHHH
T ss_pred eEE-cCC-CHHHHHhhCCEEEeCC------cHHHHHHHHHhCCCEEEccCcccchHHHHHHHHCCCeEecCcCCCCHHHH
Confidence 999 987 5788999999999643 4578999999999999998753 555566667899988653338999
Q ss_pred HHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 011954 417 ANNIVKLATHVERRLTMGKKGYERVKDRFLEHHMSQRIALVL 458 (474)
Q Consensus 417 a~~i~~ll~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~ 458 (474)
+++|.++++|++.++++++.+.+.... -..+++++.+.++.
T Consensus 338 ~~~i~~ll~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~ 378 (384)
T 2p6p_A 338 ADSCQELQAKDTYARRAQDLSREISGM-PLPATVVTALEQLA 378 (384)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHTS-CCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCHHHHHHHHHHHHHHHhC-CCHHHHHHHHHHHh
Confidence 999999999999999998887765543 46666665555544
|
| >3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A | Back alignment and structure |
|---|
Probab=99.63 E-value=1.2e-14 Score=143.77 Aligned_cols=187 Identities=14% Similarity=0.066 Sum_probs=135.4
Q ss_pred HHhcCCCCC--CEEEEEecccccCcchHHHHHHHHHHHHHHHHhccCCCcEEEE--EEcCCCCcCchHHHHHHHHHHHcC
Q 011954 261 RESLGVRDD--DLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAV--VVGSDMNAQTKFETELRNFVAEKK 336 (474)
Q Consensus 261 r~~~~~~~~--~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~--i~G~g~~~~~~~~~~l~~~~~~~~ 336 (474)
+..++++.+ .++++++++ ..|..+.+++++.++.+ +.|+..++ ++|++. .....+.+.+.+.|
T Consensus 430 r~~~~lp~~~G~v~Fg~fn~--~~Ki~p~~l~~WarIL~-------~vP~s~L~l~~~g~~~----g~~~~~~~~~~~~G 496 (631)
T 3q3e_A 430 KVDYLLRENPEVVNIGIAST--TMKLNPYFLEALKAIRD-------RAKVKVHFHFALGQSN----GITHPYVERFIKSY 496 (631)
T ss_dssp SCCCCCCSCCSEEEEEEEEC--STTCCHHHHHHHHHHHH-------HCSSEEEEEEEESSCC----GGGHHHHHHHHHHH
T ss_pred cccccCCcCCCeEEEEECCc--cccCCHHHHHHHHHHHH-------hCCCcEEEEEecCCCc----hhhHHHHHHHHHcC
Confidence 345677765 678888886 47889999999999987 34776654 367432 12334444456778
Q ss_pred CCCeEEEecCC--CChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCcceeee------eCCceeeecC
Q 011954 337 IQDHVHFVNKT--LTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVV------NGTTGLLHPT 408 (474)
Q Consensus 337 l~~~v~~~g~~--~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~~e~v~------~~~~G~l~~~ 408 (474)
+.+++.|.|.. ++....|+.+|+++.|+. + +.|++.+|||+||+|||+...++..+-+. -|-.++++..
T Consensus 497 I~~Rv~F~g~~p~~e~la~y~~aDIfLDpfp--y-~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~~GLpE~LIA~ 573 (631)
T 3q3e_A 497 LGDSATAHPHSPYHQYLRILHNCDMMVNPFP--F-GNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKRLGLPEWLIAN 573 (631)
T ss_dssp HGGGEEEECCCCHHHHHHHHHTCSEEECCSS--S-CCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHHTTCCGGGEES
T ss_pred CCccEEEcCCCCHHHHHHHHhcCcEEEeCCc--c-cCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHhcCCCcceecC
Confidence 88899999975 566788999999999985 4 55999999999999999976554433221 1333332222
Q ss_pred CCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhhh
Q 011954 409 GKEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRFLEHHMSQRIALVLREVLQYAK 466 (474)
Q Consensus 409 ~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~~~~ 466 (474)
+ .+++++...++.+|++.+++++++.++......-++...+++++.|++++++..
T Consensus 574 -d--~eeYv~~Av~La~D~~~l~~LR~~Lr~~~~~spLFd~~~~~~e~~ye~~~~~w~ 628 (631)
T 3q3e_A 574 -T--VDEYVERAVRLAENHQERLELRRYIIENNGLNTLFTGDPRPMGQVFLEKLNAFL 628 (631)
T ss_dssp -S--HHHHHHHHHHHHHCHHHHHHHHHHHHHSCCHHHHTCSCCTHHHHHHHHHHHHHH
T ss_pred -C--HHHHHHHHHHHhCCHHHHHHHHHHHHHHhhhCCCcchhHHHHHHHHHHHHHHHH
Confidence 3 799999999999999999999999988765433333667788888888877643
|
| >4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii} | Back alignment and structure |
|---|
Probab=99.63 E-value=6.3e-16 Score=148.49 Aligned_cols=336 Identities=9% Similarity=0.026 Sum_probs=189.8
Q ss_pred cCEEEEEecCCCCCChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhh-cccchh--ccceee------------ee
Q 011954 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYS-LEHKML--DRGVQV------------LS 138 (474)
Q Consensus 74 ~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~-~~~~~~--~~~~~~------------~~ 138 (474)
|.||+++...-+-- .-+.-+.++|++. +++.++..... .+..... +.+.+. ...+.+ ..
T Consensus 9 ~~~~~~v~GtRpe~---~k~~p~~~~l~~~-~~~~~~~tgqh--~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~ 82 (385)
T 4hwg_A 9 MLKVMTIVGTRPEL---IKLCCVISEFDKH-TKHILVHTGQN--YAYELNQVFFDDMGIRKPDYFLEVAADNTAKSIGLV 82 (385)
T ss_dssp CCEEEEEECSHHHH---HHHHHHHHHHHHH-SEEEEEECSCH--HHHHHTHHHHC-CCCCCCSEECCCCCCCSHHHHHHH
T ss_pred hhheeEEEEcCHhH---HHHHHHHHHHHhc-CCEEEEEeCCC--CChhHHHHHHhhCCCCCCceecCCCCCCHHHHHHHH
Confidence 67888888421100 3467778888877 88776653321 1101110 111110 000000 00
Q ss_pred hhcHHHHhhhcCCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccc--cchhhh-hhcccc-cccccccccccH
Q 011954 139 AKGEKAINTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGH--YFKLEY-VKHLPF-VAGAMIDSYTTA 214 (474)
Q Consensus 139 ~~~~~~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~--~~~~~~-~~~~~~-~~~~~~~s~~~~ 214 (474)
......+++..+||+|+++......+. .... .. ...|++....+.... .+.... +..... .+..++.+...
T Consensus 83 ~~~l~~~l~~~kPD~Vlv~gd~~~~~a-alaA-~~--~~IPv~h~eaglrs~~~~~pee~nR~~~~~~a~~~~~~te~~- 157 (385)
T 4hwg_A 83 IEKVDEVLEKEKPDAVLFYGDTNSCLS-AIAA-KR--RKIPIFHMEAGNRCFDQRVPEEINRKIIDHISDVNITLTEHA- 157 (385)
T ss_dssp HHHHHHHHHHHCCSEEEEESCSGGGGG-HHHH-HH--TTCCEEEESCCCCCSCTTSTHHHHHHHHHHHCSEEEESSHHH-
T ss_pred HHHHHHHHHhcCCcEEEEECCchHHHH-HHHH-HH--hCCCEEEEeCCCccccccCcHHHHHHHHHhhhceeecCCHHH-
Confidence 123456677899999999875443332 1111 11 234654333322111 011111 111111 12222333332
Q ss_pred HHHHHhHHHHhcCCCCCeEEEeCCC-CccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccc---cCcchHHHHH
Q 011954 215 EYWKNRTRERLGIRMPETYVVHLGN-SKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVS---RGKGQDLFLH 290 (474)
Q Consensus 215 ~~~~~~~~~~~~~~~~ki~vi~ngv-d~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~---~~Kg~~~ll~ 290 (474)
++.+ .+.|++++++.++.|++ |...+.. ....+.++++++|++++++++++.+|.+ ..|+++.+++
T Consensus 158 ---~~~l-~~~G~~~~~I~vtGnp~~D~~~~~~------~~~~~~~~~~~lgl~~~~~iLvt~hr~e~~~~~~~l~~ll~ 227 (385)
T 4hwg_A 158 ---RRYL-IAEGLPAELTFKSGSHMPEVLDRFM------PKILKSDILDKLSLTPKQYFLISSHREENVDVKNNLKELLN 227 (385)
T ss_dssp ---HHHH-HHTTCCGGGEEECCCSHHHHHHHHH------HHHHHCCHHHHTTCCTTSEEEEEECCC-----CHHHHHHHH
T ss_pred ---HHHH-HHcCCCcCcEEEECCchHHHHHHhh------hhcchhHHHHHcCCCcCCEEEEEeCCchhcCcHHHHHHHHH
Confidence 3322 35688888999999864 3221110 0112456888999977777777777753 3478999999
Q ss_pred HHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHc-C-C--CCeEEEecCC--CChHHHHhcCCEEEEcC
Q 011954 291 SFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEK-K-I--QDHVHFVNKT--LTVSPYLASIDVLVQNS 364 (474)
Q Consensus 291 a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~-~-l--~~~v~~~g~~--~~~~~~~~~adv~v~ps 364 (474)
|+.++.+ ++ ++++++... + . +++.++++ + + .++|++.++. .++..+|+.||+++.+|
T Consensus 228 al~~l~~-------~~-~~~vv~p~~-p----~----~~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adlvvt~S 290 (385)
T 4hwg_A 228 SLQMLIK-------EY-NFLIIFSTH-P----R----TKKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFCILSDS 290 (385)
T ss_dssp HHHHHHH-------HH-CCEEEEEEC-H----H----HHHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCSEEEECC
T ss_pred HHHHHHh-------cC-CeEEEEECC-h----H----HHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcEEEECC
Confidence 9998865 22 567666543 2 1 34444444 3 2 3689998764 47889999999999555
Q ss_pred CCCCCCCchHHHHHHhcCCCEEEcCCC-CcceeeeeCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHH
Q 011954 365 QARGECFGRITIEAMAFQLPVLGTAAG-GTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKD 443 (474)
Q Consensus 365 ~~~~E~~~~~~~EAma~G~PvI~s~~~-g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~ 443 (474)
|.+..||+++|+|+|+.+.. +.+|.+..| +++++.. | .+++++++.++++|++.++.|++++..+...
T Consensus 291 -------Ggv~~EA~alG~Pvv~~~~~ter~e~v~~G-~~~lv~~-d--~~~i~~ai~~ll~d~~~~~~m~~~~~~~~g~ 359 (385)
T 4hwg_A 291 -------GTITEEASILNLPALNIREAHERPEGMDAG-TLIMSGF-K--AERVLQAVKTITEEHDNNKRTQGLVPDYNEA 359 (385)
T ss_dssp -------TTHHHHHHHTTCCEEECSSSCSCTHHHHHT-CCEECCS-S--HHHHHHHHHHHHTTCBTTBCCSCCCHHHHTC
T ss_pred -------ccHHHHHHHcCCCEEEcCCCccchhhhhcC-ceEEcCC-C--HHHHHHHHHHHHhChHHHHHhhccCCCCCCC
Confidence 33579999999999998654 357777555 6777754 4 8999999999999988777776655443112
Q ss_pred hcCHHHHHHHHHHHH
Q 011954 444 RFLEHHMSQRIALVL 458 (474)
Q Consensus 444 ~fs~~~~~~~~~~~~ 458 (474)
-.+.+++++.+.+.+
T Consensus 360 g~aa~rI~~~l~~~~ 374 (385)
T 4hwg_A 360 GLVSKKILRIVLSYV 374 (385)
T ss_dssp CCHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHh
Confidence 234455555554443
|
| >2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=99.61 E-value=4.6e-15 Score=146.28 Aligned_cols=161 Identities=10% Similarity=0.012 Sum_probs=117.6
Q ss_pred CCCEEEEEecccccC-----cchHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEE
Q 011954 268 DDDLLFAIINSVSRG-----KGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVH 342 (474)
Q Consensus 268 ~~~~~i~~vgrl~~~-----Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~ 342 (474)
+...++++.|++... |.+..+++++.. .++++++++++.. .+.++ +++++|.
T Consensus 266 ~~~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~------------~~~~~v~~~g~~~-----~~~l~------~~~~~v~ 322 (441)
T 2yjn_A 266 ERRRVCLTLGISSRENSIGQVSIEELLGAVGD------------VDAEIIATFDAQQ-----LEGVA------NIPDNVR 322 (441)
T ss_dssp SSCEEEEEC----------CCSTTTTHHHHHT------------SSSEEEECCCTTT-----TSSCS------SCCSSEE
T ss_pred CCCEEEEECCCCcccccChHHHHHHHHHHHHc------------CCCEEEEEECCcc-----hhhhc------cCCCCEE
Confidence 345788889998753 788888888853 3578888776531 11111 3457999
Q ss_pred EecCCCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCC----cceeeeeCCceeeecCCCCChHHHHH
Q 011954 343 FVNKTLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGG----TMEIVVNGTTGLLHPTGKEGVTPLAN 418 (474)
Q Consensus 343 ~~g~~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g----~~e~v~~~~~G~l~~~~d~~~~~la~ 418 (474)
+.++..+ .++|..||++|. .+.+.+++|||++|+|+|+....+ ..+.+.+...|++++..+.+++++++
T Consensus 323 ~~~~~~~-~~ll~~ad~~V~------~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~ 395 (441)
T 2yjn_A 323 TVGFVPM-HALLPTCAATVH------HGGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQEFGAGIALPVPELTPDQLRE 395 (441)
T ss_dssp ECCSCCH-HHHGGGCSEEEE------CCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEECCTTTCCHHHHHH
T ss_pred EecCCCH-HHHHhhCCEEEE------CCCHHHHHHHHHhCCCEEEeCCcccHHHHHHHHHHcCCEEEcccccCCHHHHHH
Confidence 9999865 788999999994 344679999999999999998753 45556667789998876333899999
Q ss_pred HHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 011954 419 NIVKLATHVERRLTMGKKGYERVKDRFLEHHMSQRIALVLR 459 (474)
Q Consensus 419 ~i~~ll~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~ 459 (474)
+|.++++|++.++++++.+++.. +....+.+++.+++++.
T Consensus 396 ~i~~ll~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~ 435 (441)
T 2yjn_A 396 SVKRVLDDPAHRAGAARMRDDML-AEPSPAEVVGICEELAA 435 (441)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHH-TSCCHHHHHHHHHHHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHH
Confidence 99999999999999988877655 45788888877776653
|
| >2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=99.53 E-value=7.6e-13 Score=129.73 Aligned_cols=162 Identities=13% Similarity=0.116 Sum_probs=110.1
Q ss_pred CCCEEEEEecccccCcchHHHHHHHHHHHHHHHHhccCCCcEEE-EEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecC
Q 011954 268 DDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHA-VVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNK 346 (474)
Q Consensus 268 ~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l-~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~ 346 (474)
++..++++.|+.. .+..+.+.+++..+. ..++++ +++|.+.. .+.+. .++++|.+.++
T Consensus 254 ~~~~v~v~~Gs~~-~~~~~~~~~~~~al~---------~~~~~~~~~~g~~~~-----~~~~~------~~~~~v~~~~~ 312 (424)
T 2iya_A 254 GRPVLLIALGSAF-TDHLDFYRTCLSAVD---------GLDWHVVLSVGRFVD-----PADLG------EVPPNVEVHQW 312 (424)
T ss_dssp SCCEEEEECCSSS-CCCHHHHHHHHHHHT---------TCSSEEEEECCTTSC-----GGGGC------SCCTTEEEESS
T ss_pred CCCEEEEEcCCCC-cchHHHHHHHHHHHh---------cCCcEEEEEECCcCC-----hHHhc------cCCCCeEEecC
Confidence 3457778889886 333333333333331 146677 45676531 11111 24578999999
Q ss_pred CCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCC----cceeeeeCCceeeecCCCCChHHHHHHHHH
Q 011954 347 TLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGG----TMEIVVNGTTGLLHPTGKEGVTPLANNIVK 422 (474)
Q Consensus 347 ~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g----~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ 422 (474)
..+. ++|..||++|.. +...+++|||++|+|+|+....+ ..+.+.+...|+.++..+.+.++++++|.+
T Consensus 313 ~~~~-~~l~~~d~~v~~------~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ 385 (424)
T 2iya_A 313 VPQL-DILTKASAFITH------AGMGSTMEALSNAVPMVAVPQIAEQTMNAERIVELGLGRHIPRDQVTAEKLREAVLA 385 (424)
T ss_dssp CCHH-HHHTTCSEEEEC------CCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHH
T ss_pred CCHH-HHHhhCCEEEEC------CchhHHHHHHHcCCCEEEecCccchHHHHHHHHHCCCEEEcCcCCCCHHHHHHHHHH
Confidence 8776 899999999843 34579999999999999997653 234455667888887552238999999999
Q ss_pred HhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 011954 423 LATHVERRLTMGKKGYERVKDRFLEHHMSQRIALVL 458 (474)
Q Consensus 423 ll~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~ 458 (474)
+++|++.++++++.+.+.. +....++.++.+++++
T Consensus 386 ll~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~ 420 (424)
T 2iya_A 386 VASDPGVAERLAAVRQEIR-EAGGARAAADILEGIL 420 (424)
T ss_dssp HHHCHHHHHHHHHHHHHHH-TSCHHHHHHHHHHHHH
T ss_pred HHcCHHHHHHHHHHHHHHH-hcCcHHHHHHHHHHHH
Confidence 9999998888877766543 3456666666666554
|
| >3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=4.3e-13 Score=130.48 Aligned_cols=157 Identities=9% Similarity=-0.006 Sum_probs=106.5
Q ss_pred CCCEEEEEecccc-cCcchHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecC
Q 011954 268 DDDLLFAIINSVS-RGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNK 346 (474)
Q Consensus 268 ~~~~~i~~vgrl~-~~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~ 346 (474)
.++.++++.|++. ..+.+..+++++.+ .++++++.++..... ..+..+++.+.++
T Consensus 220 ~~~~Vlv~~Gs~~~~~~~~~~~~~al~~------------~~~~vv~~~g~~~~~------------~~~~~~~v~~~~~ 275 (404)
T 3h4t_A 220 GSPPVYVGFGSGPAPAEAARVAIEAVRA------------QGRRVVLSSGWAGLG------------RIDEGDDCLVVGE 275 (404)
T ss_dssp SSCCEEECCTTSCCCTTHHHHHHHHHHH------------TTCCEEEECTTTTCC------------CSSCCTTEEEESS
T ss_pred CCCeEEEECCCCCCcHHHHHHHHHHHHh------------CCCEEEEEeCCcccc------------cccCCCCEEEecC
Confidence 4456777889987 56666777777654 356777765532110 1234578999999
Q ss_pred CCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCc----ceeeeeCCceeeecCCCCChHHHHHHHHH
Q 011954 347 TLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGT----MEIVVNGTTGLLHPTGKEGVTPLANNIVK 422 (474)
Q Consensus 347 ~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~----~e~v~~~~~G~l~~~~d~~~~~la~~i~~ 422 (474)
.. ..+++..||++|.. |...++.||+++|+|+|+....+- .+.+.+...|..++..+.+.++++++|.+
T Consensus 276 ~~-~~~ll~~~d~~v~~------gG~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ 348 (404)
T 3h4t_A 276 VN-HQVLFGRVAAVVHH------GGAGTTTAVTRAGAPQVVVPQKADQPYYAGRVADLGVGVAHDGPTPTVESLSAALAT 348 (404)
T ss_dssp CC-HHHHGGGSSEEEEC------CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHHHHHHHHHH
T ss_pred CC-HHHHHhhCcEEEEC------CcHHHHHHHHHcCCCEEEcCCcccHHHHHHHHHHCCCEeccCcCCCCHHHHHHHHHH
Confidence 74 48899999999943 345789999999999999876543 22344556788877554348999999999
Q ss_pred HhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 011954 423 LATHVERRLTMGKKGYERVKDRFLEHHMSQRIALVL 458 (474)
Q Consensus 423 ll~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~ 458 (474)
+++ ++.++++.+.+.+.. + -..+++++.+++++
T Consensus 349 ll~-~~~~~~~~~~~~~~~-~-~~~~~~~~~i~~~~ 381 (404)
T 3h4t_A 349 ALT-PGIRARAAAVAGTIR-T-DGTTVAAKLLLEAI 381 (404)
T ss_dssp HTS-HHHHHHHHHHHTTCC-C-CHHHHHHHHHHHHH
T ss_pred HhC-HHHHHHHHHHHHHHh-h-hHHHHHHHHHHHHH
Confidence 998 877777666554322 2 34455555554444
|
| >1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=8.9e-13 Score=133.06 Aligned_cols=247 Identities=12% Similarity=0.054 Sum_probs=162.9
Q ss_pred ccccccHHHHHHh-HHHHhcCCCCCeEEEeCCCCcccc----chhh--------------------------hh------
Q 011954 208 IDSYTTAEYWKNR-TRERLGIRMPETYVVHLGNSKDLM----DIAE--------------------------DS------ 250 (474)
Q Consensus 208 ~~s~~~~~~~~~~-~~~~~~~~~~ki~vi~ngvd~~~~----~~~~--------------------------~~------ 250 (474)
.+|...++.++.. +..-+..-+.++.-|-||||...+ .|.- +.
T Consensus 419 gVS~lH~e~ik~~~f~~~~~~~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~w~~d~~~l~~l~~~~~d~~~~~~ 498 (796)
T 1l5w_A 419 GVAALHSDLVVKDLFPEYHQLWPNKFHNVTNGITPRRWIKQCNPALAALLDKSLQKEWANDLDQLINLEKFADDAKFRQQ 498 (796)
T ss_dssp ESSHHHHHHHHHTTSHHHHHHCGGGEEECCCCBCHHHHTTTTCHHHHHHHHHHCSSCCTTCGGGGGGGGGGGGCHHHHHH
T ss_pred cccHHHHHHHHhHHhhHHHHhCccccCCCcCCCcHHHhhcccCHhHHHHHHHhcCcccccCHHHHHHHHhcCCCHHHHHH
Confidence 3444444444421 112234455789999999998877 2321 00
Q ss_pred --HHHHHhHHH----HHHhcCCC--CCCEEEEEecccccCcchHH-HHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcC
Q 011954 251 --VARRVLREH----VRESLGVR--DDDLLFAIINSVSRGKGQDL-FLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQ 321 (474)
Q Consensus 251 --~~~~~~~~~----~r~~~~~~--~~~~~i~~vgrl~~~Kg~~~-ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~ 321 (474)
..+...+.. +++++|++ ++.+.++++.|++.+||+++ ++..+.++.+...+......++++++.|.+.+..
T Consensus 499 l~~~K~~nK~~L~~~l~~~~Gl~vdpd~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y 578 (796)
T 1l5w_A 499 YREIKQANKVRLAEFVKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGY 578 (796)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTTC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCcCCCcceEeeeecchhhcccCEeHHHHHHHHHHHhcCCCCCCCCeEEEEEecCChhH
Confidence 122222344 46777864 56799999999999999999 8998887764332211111469999999986554
Q ss_pred chHHHHHHHHHHHc--------CCCC--eEEEecC-C-CChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcC
Q 011954 322 TKFETELRNFVAEK--------KIQD--HVHFVNK-T-LTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTA 389 (474)
Q Consensus 322 ~~~~~~l~~~~~~~--------~l~~--~v~~~g~-~-~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~ 389 (474)
. ..+.+.+++... .+.+ +|.|+.. . +--..++.+||++++||+...|++|+.-|=||..|.+.|++-
T Consensus 579 ~-~aK~iIk~i~~va~~in~Dp~~~~~lKVvfl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtL 657 (796)
T 1l5w_A 579 Y-LAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTL 657 (796)
T ss_dssp H-HHHHHHHHHHHHHHHHHTCTTTGGGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECS
T ss_pred H-HHHHHHHHHHHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeeecCc
Confidence 3 233333333322 3456 7888864 3 444567899999999998668999999999999999999998
Q ss_pred CCCcceeeee--CCceeeecCCCCChHHHHH-------HHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 011954 390 AGGTMEIVVN--GTTGLLHPTGKEGVTPLAN-------NIVKLATHVERRLTMGKKGYERVKDRFLEHHMSQRIALVLRE 460 (474)
Q Consensus 390 ~~g~~e~v~~--~~~G~l~~~~d~~~~~la~-------~i~~ll~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~ 460 (474)
-|...|+.+. .+||++|.. + ++++.+ +....-.+++ ++++-+++ +...|||+.- ..|.++|++
T Consensus 658 DGanvEi~e~vG~~NgF~FG~-~--~~ev~~l~~~~y~a~~~y~~~~~-~~~vvd~~---~~g~fs~~~~-~~y~~Ly~~ 729 (796)
T 1l5w_A 658 DGANVEIAEKVGEENIFIFGH-T--VEQVKAILAKGYDPVKWRKKDKV-LDAVLKEL---ESGKYSDGDK-HAFDQMLHS 729 (796)
T ss_dssp CTTHHHHHHHHCGGGSEECSC-C--HHHHHHHHHHCCCHHHHHHHCHH-HHHHHHHH---HHTTTTTTCT-TTTHHHHHH
T ss_pred CCeeeehhhccCCCcEEEecC-C--HHHHHHHHHcccCHHHHhhcCHH-HHHHHHHH---HcCCCCCCcH-HHHHHHHHH
Confidence 8887777543 469999987 4 677663 2222333553 44443433 3467999875 778899988
Q ss_pred HHh
Q 011954 461 VLQ 463 (474)
Q Consensus 461 ~~~ 463 (474)
++.
T Consensus 730 L~~ 732 (796)
T 1l5w_A 730 IGK 732 (796)
T ss_dssp TST
T ss_pred Hhc
Confidence 764
|
| >2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} | Back alignment and structure |
|---|
Probab=99.46 E-value=4.9e-13 Score=134.93 Aligned_cols=250 Identities=13% Similarity=0.079 Sum_probs=162.8
Q ss_pred ccccccHHHHHH-hHHHHhcCCCCCeEEEeCCCCcccc----chhhh---------------------------h-----
Q 011954 208 IDSYTTAEYWKN-RTRERLGIRMPETYVVHLGNSKDLM----DIAED---------------------------S----- 250 (474)
Q Consensus 208 ~~s~~~~~~~~~-~~~~~~~~~~~ki~vi~ngvd~~~~----~~~~~---------------------------~----- 250 (474)
.+|...++..+. .+...+..-+.++.-|-||||...+ .|.-. .
T Consensus 408 gVS~lHae~ik~~~f~~~~~~~p~kf~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~d~~~l~~l~~~~~d~~~~~ 487 (796)
T 2c4m_A 408 GVAALHTEIIKAETLADWYALWPEKFNNKTNGVTPRRWLRMINPGLSDLLTRLSGSDDWVTDLDELKKLRSYADDKSVLE 487 (796)
T ss_dssp ESSHHHHHHHHHTTTHHHHHHCGGGEEECCCCBCTCCCCCTTCHHHHHHHHHHHSSSGGGGCGGGGGGGGGGGGCHHHHH
T ss_pred eccHHHHHHhhhhhhhhHHHcCccccccccCCcchHHhhcccCHhHHHHHHHhcCchhhhhChHHHHHHHhhCCCHHHHH
Confidence 344444555442 2222234456789999999999888 23210 0
Q ss_pred ---HHHHHhHHH----HHHhcCCC--CCCEEEEEecccccCcchHH-HHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCc
Q 011954 251 ---VARRVLREH----VRESLGVR--DDDLLFAIINSVSRGKGQDL-FLHSFYESLQLIREKKLQVPSMHAVVVGSDMNA 320 (474)
Q Consensus 251 ---~~~~~~~~~----~r~~~~~~--~~~~~i~~vgrl~~~Kg~~~-ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~ 320 (474)
..+...+.. ++++.|++ ++.+.++++.|++.+||+++ ++..+.++.+...+......++++++.|.+.+.
T Consensus 488 ~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~ 567 (796)
T 2c4m_A 488 ELRAIKAANKQDFAEWILERQGIEIDPESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKEDGLTDIPARTVIFGAKAAPG 567 (796)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEECCCCGGGTHHHHHHHHHHHHHHHHTSCCCSSCCEEEEEECCCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCCCCcEEEEeecchhhcccCEeHHHHHHHHHHHhhCCCCCCCCeEEEEEecCCHh
Confidence 112222344 46777764 56799999999999999999 899888775432211001136999999998655
Q ss_pred CchHHHHHHHHHHHc--------CCCC--eEEEecC-C-CChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEc
Q 011954 321 QTKFETELRNFVAEK--------KIQD--HVHFVNK-T-LTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGT 388 (474)
Q Consensus 321 ~~~~~~~l~~~~~~~--------~l~~--~v~~~g~-~-~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s 388 (474)
.. ..+.+.+++... .+.+ +|.|+.. . +-...++.+||++++||+...|++|+.-+=||..|.+.|++
T Consensus 568 y~-~aK~iIk~i~~va~~in~dp~~~~~lKVvFl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGt 646 (796)
T 2c4m_A 568 YV-RAKAIIKLINSIADLVNNDPEVSPLLKVVFVENYNVSPAEHILPASDVSEQISTAGKEASGTSNMKFMMNGALTLGT 646 (796)
T ss_dssp CH-HHHHHHHHHHHHHHHHHTCTTTTTTEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHHTTCEEEEE
T ss_pred HH-HHHHHHHHHHHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeEEec
Confidence 43 233333333222 3556 7888864 3 44556789999999999866899999999999999999999
Q ss_pred CCCCcceeeee--CCceeeecCCCCChHHHHHH---HHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Q 011954 389 AAGGTMEIVVN--GTTGLLHPTGKEGVTPLANN---IVKLATHVERRLTMGKKGYERVKDRFLEHHMSQRIALVLREVLQ 463 (474)
Q Consensus 389 ~~~g~~e~v~~--~~~G~l~~~~d~~~~~la~~---i~~ll~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~ 463 (474)
--|...|+.+. .+||++|....++++++-.. ....-.+++ ++++-+++ +...|||+.- .+|.++|++++.
T Consensus 647 LDGanvEi~e~vG~~NgF~FG~~~~ev~~l~~~y~a~~~y~~~~~-~~~vvd~~---~~g~fs~~~~-~~y~~Ly~~L~~ 721 (796)
T 2c4m_A 647 MDGANVEIVDSVGEENAYIFGARVEELPALRESYKPYELYETVPG-LKRALDAL---DNGTLNDNNS-GLFYDLKHSLIH 721 (796)
T ss_dssp SSTHHHHHHHHHCGGGSEEESCCTTTHHHHHHTCCHHHHHHHSTT-HHHHHHTT---TSSSSCCTTC-CHHHHHHHHHHS
T ss_pred cCCeEeehhhhcCCCcEEEecCchhhHHHHHHhhChHHHhhcCHH-HHHHHHHH---HcCCCCCCCH-HHHHHHHHHHHh
Confidence 88877776543 46999998743226666542 222223442 33332322 2356999776 779999999874
|
| >2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... | Back alignment and structure |
|---|
Probab=99.44 E-value=8.4e-12 Score=126.47 Aligned_cols=201 Identities=13% Similarity=0.069 Sum_probs=134.0
Q ss_pred ccccccHHHHHH-hHHHHhcCCCCCeEEEeCCCCcccc----chhhh----------------------------hH---
Q 011954 208 IDSYTTAEYWKN-RTRERLGIRMPETYVVHLGNSKDLM----DIAED----------------------------SV--- 251 (474)
Q Consensus 208 ~~s~~~~~~~~~-~~~~~~~~~~~ki~vi~ngvd~~~~----~~~~~----------------------------~~--- 251 (474)
.+|...++..+. .+...+...+.++.-|-||||...+ .|.-. ..
T Consensus 443 gVS~lH~e~ik~~~f~~~~~~~p~k~~~iTNGI~~rrWl~~~NP~l~~lI~~~ig~~W~~~~~~l~~L~~y~~d~~~~~~ 522 (824)
T 2gj4_A 443 GVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPGLAEIIAERIGEEYISDLDQLRKLLSYVDDEAFIRD 522 (824)
T ss_dssp ESSHHHHHHHHHTTTHHHHHHCGGGEEECCCCBCTCCCCCCTCHHHHHHHHHHHCSGGGGCGGGGGGGGGGTTCHHHHHH
T ss_pred eEcHHHHHHHhhHHhHHHHHcChhhcccccCCcChhhhcccCCHhHHHHHHHhcCchhhhCHHHHHHHHhccchHHHHHH
Confidence 344444444432 2222334456789999999998887 33211 11
Q ss_pred ---HHHHhHHH----HHHhcCCC--CCCEEEEEecccccCcchHHH-HHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcC
Q 011954 252 ---ARRVLREH----VRESLGVR--DDDLLFAIINSVSRGKGQDLF-LHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQ 321 (474)
Q Consensus 252 ---~~~~~~~~----~r~~~~~~--~~~~~i~~vgrl~~~Kg~~~l-l~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~ 321 (474)
.+...+.. +++..|++ ++.+.++++.|++.+||++++ +..+.++.+...+......+.++++.|.+.+..
T Consensus 523 ~~~~K~~nK~~la~~l~~~~Gl~vdpd~l~~g~vkRl~eYKRq~L~~l~~i~~~~~i~~~~~~~~~p~q~If~GKA~P~y 602 (824)
T 2gj4_A 523 VAKVKQENKLKFAAYLEREYKVHINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGY 602 (824)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEEEECCCCTTC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCcCCCcceEeeeecchhhcchhhHHHHHHHHHHHHHhCCCCCCCCEEEEEEEeCCHhH
Confidence 11222233 56667764 567999999999999999998 888887753332211011168999999986554
Q ss_pred chHHHH----HHHHHHHc----CCCC--eEEEec-CC-CChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcC
Q 011954 322 TKFETE----LRNFVAEK----KIQD--HVHFVN-KT-LTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTA 389 (474)
Q Consensus 322 ~~~~~~----l~~~~~~~----~l~~--~v~~~g-~~-~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~ 389 (474)
. ..+. +.+.++.. .+.+ +|.|+. +. +-...++.+||++++||+...|++|+.-+=||..|.+.|++-
T Consensus 603 ~-~aK~iIkli~~va~~in~Dp~v~~~lKVvFl~nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~MKamlNGaLtigtl 681 (824)
T 2gj4_A 603 H-MAKMIIKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTM 681 (824)
T ss_dssp H-HHHHHHHHHHHHHHHHTTCTTTGGGEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHTTCEEEECS
T ss_pred H-HHHHHHHHHHHHHHHhccCcccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCceEEEEe
Confidence 3 2222 44444433 2245 788886 43 444567899999999998668999999999999999999998
Q ss_pred CCCcceeee--eCCceeeecCC
Q 011954 390 AGGTMEIVV--NGTTGLLHPTG 409 (474)
Q Consensus 390 ~~g~~e~v~--~~~~G~l~~~~ 409 (474)
-|...|+.+ .++||++|...
T Consensus 682 DGanvEi~e~vG~~Ngf~FG~~ 703 (824)
T 2gj4_A 682 DGANVEMAEEAGEENFFIFGMR 703 (824)
T ss_dssp CTTHHHHHHHHCGGGSEECSCC
T ss_pred cCccchhhhccCCCCEEEeCCc
Confidence 787777653 45689999764
|
| >4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=6e-12 Score=122.31 Aligned_cols=158 Identities=12% Similarity=0.077 Sum_probs=101.5
Q ss_pred CCCEEEEEecccccCcc-hHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecC
Q 011954 268 DDDLLFAIINSVSRGKG-QDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNK 346 (474)
Q Consensus 268 ~~~~~i~~vgrl~~~Kg-~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~ 346 (474)
+...++++.|++...++ .+.+.+++..+.+ .+..+++.+.+.... ....+++++.+.++
T Consensus 236 ~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~---------~~~~~v~~~~~~~~~-----------~~~~~~~~v~~~~~ 295 (400)
T 4amg_A 236 GRRRIAVTLGSIDALSGGIAKLAPLFSEVAD---------VDAEFVLTLGGGDLA-----------LLGELPANVRVVEW 295 (400)
T ss_dssp TCCEEEECCCSCC--CCSSSTTHHHHHHGGG---------SSSEEEEECCTTCCC-----------CCCCCCTTEEEECC
T ss_pred CCcEEEEeCCcccccCccHHHHHHHHHHhhc---------cCceEEEEecCcccc-----------ccccCCCCEEEEee
Confidence 44567777888766443 3444444433321 456777666543111 11245678999998
Q ss_pred CCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCC----cceeeeeCCceeeecCCCCChHHHHHHHHH
Q 011954 347 TLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGG----TMEIVVNGTTGLLHPTGKEGVTPLANNIVK 422 (474)
Q Consensus 347 ~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g----~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ 422 (474)
. ...++|..+|++| ..+...+++|||++|+|+|+....+ ..+.+.+...|+.++.. +..+++|.+
T Consensus 296 ~-p~~~lL~~~~~~v------~h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~~G~g~~l~~~----~~~~~al~~ 364 (400)
T 4amg_A 296 I-PLGALLETCDAII------HHGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTGLGIGFDAEAG----SLGAEQCRR 364 (400)
T ss_dssp C-CHHHHHTTCSEEE------ECCCHHHHHHHHHHTCCEEECCC---CHHHHHHHHHHTSEEECCTT----TCSHHHHHH
T ss_pred c-CHHHHhhhhhhee------ccCCccHHHHHHHhCCCEEEecCcccHHHHHHHHHHCCCEEEcCCC----CchHHHHHH
Confidence 7 5778999999998 3445679999999999999976554 33445455577777654 456889999
Q ss_pred HhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 011954 423 LATHVERRLTMGKKGYERVKDRFLEHHMSQRIALV 457 (474)
Q Consensus 423 ll~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~ 457 (474)
+++|++.+++..+.+.+. .+.=+....++.++++
T Consensus 365 lL~d~~~r~~a~~l~~~~-~~~~~~~~~a~~le~l 398 (400)
T 4amg_A 365 LLDDAGLREAALRVRQEM-SEMPPPAETAAXLVAL 398 (400)
T ss_dssp HHHCHHHHHHHHHHHHHH-HTSCCHHHHHHHHHHH
T ss_pred HHcCHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHh
Confidence 999999887776655543 3434666666655543
|
| >1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=99.42 E-value=1.9e-11 Score=119.36 Aligned_cols=158 Identities=8% Similarity=-0.008 Sum_probs=109.2
Q ss_pred CCEEEEEeccc-ccCcchHHHHHHHHHHHHHHHHhccCCCcEEEEEE-cCCCCcCchHHHHHHHHHHHcCCCCeEEEecC
Q 011954 269 DDLLFAIINSV-SRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVV-GSDMNAQTKFETELRNFVAEKKIQDHVHFVNK 346 (474)
Q Consensus 269 ~~~~i~~vgrl-~~~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~-G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~ 346 (474)
+..++++.|++ ...+..+.++++++++ +.+++++ |.+.. . ..++++++.+.++
T Consensus 238 ~~~v~v~~Gs~~~~~~~~~~~~~al~~~------------~~~~v~~~g~~~~-----~--------~~~~~~~v~~~~~ 292 (415)
T 1iir_A 238 PPPVYLGFGSLGAPADAVRVAIDAIRAH------------GRRVILSRGWADL-----V--------LPDDGADCFAIGE 292 (415)
T ss_dssp SCCEEEECC---CCHHHHHHHHHHHHHT------------TCCEEECTTCTTC-----C--------CSSCGGGEEECSS
T ss_pred CCeEEEeCCCCCCcHHHHHHHHHHHHHC------------CCeEEEEeCCCcc-----c--------ccCCCCCEEEeCc
Confidence 35678888998 4777778888888643 3455554 76531 1 0234568999999
Q ss_pred CCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCC----cceeeeeCCceeeecCCCCChHHHHHHHHH
Q 011954 347 TLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGG----TMEIVVNGTTGLLHPTGKEGVTPLANNIVK 422 (474)
Q Consensus 347 ~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g----~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ 422 (474)
..+ .++|..||++|.. +...+++|||++|+|+|+....+ ..+.+.+...|+.++..+.+.++++++|.+
T Consensus 293 ~~~-~~~l~~~d~~v~~------~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ 365 (415)
T 1iir_A 293 VNH-QVLFGRVAAVIHH------GGAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHDGPIPTFDSLSAALAT 365 (415)
T ss_dssp CCH-HHHGGGSSEEEEC------CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHHHHHHHHHH
T ss_pred CCh-HHHHhhCCEEEeC------CChhHHHHHHHcCCCEEECCCCCccHHHHHHHHHCCCcccCCcCCCCHHHHHHHHHH
Confidence 865 5788999999953 33579999999999999997654 344555667888887653348999999999
Q ss_pred HhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhh
Q 011954 423 LATHVERRLTMGKKGYERVKDRFLEHHMSQRIALVLREVLQY 464 (474)
Q Consensus 423 ll~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~~ 464 (474)
+ +|++.++++.+.+++ +....-+++..+.+++++..
T Consensus 366 l-~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~i~~~~~~ 401 (415)
T 1iir_A 366 A-LTPETHARATAVAGT-----IRTDGAAVAARLLLDAVSRE 401 (415)
T ss_dssp H-TSHHHHHHHHHHHHH-----SCSCHHHHHHHHHHHHHHTC
T ss_pred H-cCHHHHHHHHHHHHH-----HhhcChHHHHHHHHHHHHhc
Confidence 9 998877776665554 33345555566666666554
|
| >2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.35 E-value=2.8e-12 Score=108.74 Aligned_cols=135 Identities=7% Similarity=0.055 Sum_probs=100.2
Q ss_pred CCCEEEEEecccc---cCcchHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEe
Q 011954 268 DDDLLFAIINSVS---RGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFV 344 (474)
Q Consensus 268 ~~~~~i~~vgrl~---~~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~ 344 (474)
+...+++++|++. +.|.+..+++++.+ .+.++++++++... + +++++|++.
T Consensus 20 ~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~------------~~~~~~~~~g~~~~-----~---------~~~~~v~~~ 73 (170)
T 2o6l_A 20 ENGVVVFSLGSMVSNMTEERANVIASALAQ------------IPQKVLWRFDGNKP-----D---------TLGLNTRLY 73 (170)
T ss_dssp TTCEEEEECCSCCTTCCHHHHHHHHHHHTT------------SSSEEEEECCSSCC-----T---------TCCTTEEEE
T ss_pred CCCEEEEECCCCcccCCHHHHHHHHHHHHh------------CCCeEEEEECCcCc-----c---------cCCCcEEEe
Confidence 4467888999985 56777777777743 24678777765411 0 245789999
Q ss_pred cCCCChHHHH--hcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCC----cceeeeeCCceeeecCCCCChHHHHH
Q 011954 345 NKTLTVSPYL--ASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGG----TMEIVVNGTTGLLHPTGKEGVTPLAN 418 (474)
Q Consensus 345 g~~~~~~~~~--~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g----~~e~v~~~~~G~l~~~~d~~~~~la~ 418 (474)
|+..+ .+++ ..||++|.. +.+.+++|||++|+|+|+.+..+ ..+.+.+...|++++..+.+++++++
T Consensus 74 ~~~~~-~~~l~~~~ad~~I~~------~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~g~g~~~~~~~~~~~~l~~ 146 (170)
T 2o6l_A 74 KWIPQ-NDLLGHPKTRAFITH------GGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKARGAAVRVDFNTMSSTDLLN 146 (170)
T ss_dssp SSCCH-HHHHTSTTEEEEEEC------CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTTSEEECCTTTCCHHHHHH
T ss_pred cCCCH-HHHhcCCCcCEEEEc------CCccHHHHHHHcCCCEEeccchhhHHHHHHHHHHcCCeEEeccccCCHHHHHH
Confidence 99855 5666 899999953 34689999999999999998753 35566677899999876333899999
Q ss_pred HHHHHhhCHHHHHHHHH
Q 011954 419 NIVKLATHVERRLTMGK 435 (474)
Q Consensus 419 ~i~~ll~~~~~~~~~~~ 435 (474)
+|.++++|++.++++.+
T Consensus 147 ~i~~ll~~~~~~~~a~~ 163 (170)
T 2o6l_A 147 ALKRVINDPSYKENVMK 163 (170)
T ss_dssp HHHHHHHCHHHHHHHHH
T ss_pred HHHHHHcCHHHHHHHHH
Confidence 99999999875554433
|
| >1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=99.33 E-value=1e-10 Score=114.27 Aligned_cols=157 Identities=10% Similarity=0.041 Sum_probs=104.9
Q ss_pred CCEEEEEecccc---cCcchHHHHHHHHHHHHHHHHhccCCCcEEEEEE-cCCCCcCchHHHHHHHHHHHcCCCCeEEEe
Q 011954 269 DDLLFAIINSVS---RGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVV-GSDMNAQTKFETELRNFVAEKKIQDHVHFV 344 (474)
Q Consensus 269 ~~~~i~~vgrl~---~~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~-G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~ 344 (474)
+..++++.|+.. ..+..+.+++++.++ +.+++++ |.+. .. . ..+++++.+.
T Consensus 237 ~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~------------~~~~v~~~g~~~-----~~--~------~~~~~~v~~~ 291 (416)
T 1rrv_A 237 SPPVHIGFGSSSGRGIADAAKVAVEAIRAQ------------GRRVILSRGWTE-----LV--L------PDDRDDCFAI 291 (416)
T ss_dssp SCCEEECCTTCCSHHHHHHHHHHHHHHHHT------------TCCEEEECTTTT-----CC--C------SCCCTTEEEE
T ss_pred CCeEEEecCCCCccChHHHHHHHHHHHHHC------------CCeEEEEeCCcc-----cc--c------cCCCCCEEEe
Confidence 356777889875 355566666666532 3566665 7652 10 0 2345789999
Q ss_pred cCCCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCC----cceeeeeCCceeeecCCCCChHHHHHHH
Q 011954 345 NKTLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGG----TMEIVVNGTTGLLHPTGKEGVTPLANNI 420 (474)
Q Consensus 345 g~~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g----~~e~v~~~~~G~l~~~~d~~~~~la~~i 420 (474)
++.. ..++|..||++|. .+...+++||+++|+|+|+....+ ..+.+.+...|+.++..+.+.++++++|
T Consensus 292 ~~~~-~~~ll~~~d~~v~------~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i 364 (416)
T 1rrv_A 292 DEVN-FQALFRRVAAVIH------HGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTPTFESLSAAL 364 (416)
T ss_dssp SSCC-HHHHGGGSSEEEE------CCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEECSSSCCCHHHHHHHH
T ss_pred ccCC-hHHHhccCCEEEe------cCChhHHHHHHHcCCCEEEccCCCCcHHHHHHHHHCCCccCCCCCCCCHHHHHHHH
Confidence 9985 6889999999994 344679999999999999987643 3334555668888875433389999999
Q ss_pred HHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH-HHHHhh
Q 011954 421 VKLATHVERRLTMGKKGYERVKDRFLEHHMSQRIALVL-REVLQY 464 (474)
Q Consensus 421 ~~ll~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~-~~~~~~ 464 (474)
.++ +|++.++++++.+++.. ...-. +..+.+ ++++..
T Consensus 365 ~~l-~~~~~~~~~~~~~~~~~-----~~~~~-~~~~~i~e~~~~~ 402 (416)
T 1rrv_A 365 TTV-LAPETRARAEAVAGMVL-----TDGAA-AAADLVLAAVGRE 402 (416)
T ss_dssp HHH-TSHHHHHHHHHHTTTCC-----CCHHH-HHHHHHHHHHHC-
T ss_pred HHh-hCHHHHHHHHHHHHHHh-----hcCcH-HHHHHHHHHHhcc
Confidence 999 99887777766554322 22222 444555 555544
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=99.32 E-value=7.2e-10 Score=114.91 Aligned_cols=187 Identities=12% Similarity=0.117 Sum_probs=144.3
Q ss_pred HHhcCCCCCCEEEEEecccccCcchHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCC-C
Q 011954 261 RESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQ-D 339 (474)
Q Consensus 261 r~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~-~ 339 (474)
|+.+|++++.++++++.++ .|=.+.+++++.++++ +.|+.+|++..... .....+++.+++.|+. +
T Consensus 514 R~~~gLp~~~v~f~~fN~~--~Ki~p~~~~~W~~IL~-------~vP~S~L~Ll~~~~----~~~~~l~~~~~~~gi~~~ 580 (723)
T 4gyw_A 514 RSQYGLPEDAIVYCNFNQL--YKIDPSTLQMWANILK-------RVPNSVLWLLRFPA----VGEPNIQQYAQNMGLPQN 580 (723)
T ss_dssp GGGGTCCTTSEEEECCSCG--GGCCHHHHHHHHHHHH-------HCSSEEEEEEETTG----GGHHHHHHHHHHTTCCGG
T ss_pred hhhcCCCCCCEEEEeCCcc--ccCCHHHHHHHHHHHH-------hCCCCeEEEEeCcH----HHHHHHHHHHHhcCCCcC
Confidence 6778999999998888765 5667889999999888 45999999887653 3567889999999985 6
Q ss_pred eEEEecCC--CChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCcce-----eeee-CCceeeecCCCC
Q 011954 340 HVHFVNKT--LTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTME-----IVVN-GTTGLLHPTGKE 411 (474)
Q Consensus 340 ~v~~~g~~--~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~~e-----~v~~-~~~G~l~~~~d~ 411 (474)
+|+|.+.. ++....|..+|+++=|-- -+.+.+..||+.+|+|||+-....... ++.. |-.-+++. +
T Consensus 581 r~~f~~~~~~~~~l~~~~~~Di~LDt~p---~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~gl~e~ia~--~- 654 (723)
T 4gyw_A 581 RIIFSPVAPKEEHVRRGQLADVCLDTPL---CNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLELIAK--N- 654 (723)
T ss_dssp GEEEEECCCHHHHHHHGGGCSEEECCSS---SCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHHTCGGGBCS--S-
T ss_pred eEEECCCCCHHHHHHHhCCCeEEeCCCC---cCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHcCCcccccC--C-
Confidence 79999864 556677899999998764 466899999999999999864221111 1100 11122332 3
Q ss_pred ChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHhhhhc
Q 011954 412 GVTPLANNIVKLATHVERRLTMGKKGYERVKD--RFLEHHMSQRIALVLREVLQYAKI 467 (474)
Q Consensus 412 ~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~--~fs~~~~~~~~~~~~~~~~~~~~~ 467 (474)
.++..+.-.++.+|++.+.++++.-++.... -|+.+.+++.+++.|+++.++...
T Consensus 655 -~~~Y~~~a~~la~d~~~l~~lr~~l~~~~~~s~l~d~~~~~~~le~a~~~~w~r~~~ 711 (723)
T 4gyw_A 655 -RQEYEDIAVKLGTDLEYLKKVRGKVWKQRISSPLFNTKQYTMELERLYLQMWEHYAA 711 (723)
T ss_dssp -HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred -HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhCcCcCHHHHHHHHHHHHHHHHHHHHc
Confidence 7899999999999999999999888777655 599999999999999999886543
|
| >3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A* | Back alignment and structure |
|---|
Probab=98.60 E-value=5.7e-06 Score=75.05 Aligned_cols=94 Identities=7% Similarity=0.068 Sum_probs=65.7
Q ss_pred CEEEEEecccccCcchHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCCCC
Q 011954 270 DLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLT 349 (474)
Q Consensus 270 ~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~ 349 (474)
+.++++.|......-...+++++.. ..+ -.+|.|.+. ...+++++..++. .++.+.++.++
T Consensus 158 ~~ILv~~GG~d~~~l~~~vl~~L~~-----------~~~-i~vv~G~~~----~~~~~l~~~~~~~---~~v~v~~~~~~ 218 (282)
T 3hbm_A 158 YDFFICMGGTDIKNLSLQIASELPK-----------TKI-ISIATSSSN----PNLKKLQKFAKLH---NNIRLFIDHEN 218 (282)
T ss_dssp EEEEEECCSCCTTCHHHHHHHHSCT-----------TSC-EEEEECTTC----TTHHHHHHHHHTC---SSEEEEESCSC
T ss_pred CeEEEEECCCchhhHHHHHHHHhhc-----------CCC-EEEEECCCc----hHHHHHHHHHhhC---CCEEEEeCHHH
Confidence 3566677876544333344444421 123 446778764 2567777766653 47999999999
Q ss_pred hHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcC
Q 011954 350 VSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTA 389 (474)
Q Consensus 350 ~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~ 389 (474)
+.++|+.||++|.+ .|.++.|++++|+|.|.-.
T Consensus 219 m~~~m~~aDlvI~~-------gG~T~~E~~~~g~P~i~ip 251 (282)
T 3hbm_A 219 IAKLMNESNKLIIS-------ASSLVNEALLLKANFKAIC 251 (282)
T ss_dssp HHHHHHTEEEEEEE-------SSHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHCCEEEEC-------CcHHHHHHHHcCCCEEEEe
Confidence 99999999999952 3589999999999998865
|
| >3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A* | Back alignment and structure |
|---|
Probab=98.08 E-value=0.00015 Score=75.60 Aligned_cols=294 Identities=12% Similarity=0.115 Sum_probs=154.3
Q ss_pred cCEEEEEecC-CCCCChhHHHHHHHHHHHhc--CcEEEEEeCCCCCCchhhhhhcccchhccceeeeehhcHHHHhhhcC
Q 011954 74 SKLVLLVSHE-LSLSGGPLLLMELAFLLRGV--GAEVVWITNQKPNEPDEVIYSLEHKMLDRGVQVLSAKGEKAINTALN 150 (474)
Q Consensus 74 ~~kIl~v~~~-~~~gG~~~~~~~l~~~L~~~--G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (474)
..+|+|.+.. -..++-++.+.+ +|.+. ++++.+++...... ....++.++.......+.....
T Consensus 352 ~~~ivf~s~~g~~~~~n~~~i~~---~l~~~~~~~~~~w~~~~~~~~-----------~~~~~~~~v~~~s~~~~~~l~~ 417 (729)
T 3l7i_A 352 PKTIVFESFGGKNYSDSPKYIYE---YMQKYYPNYRYIWSFKNPDKN-----------VVPGSAEKVKRNSAEYYQAYSE 417 (729)
T ss_dssp EEEEEEEBGGGTBSCHHHHHHHH---HHHHHCTTSEEEEEESSGGGC-----------CCCSSCEEEETTSHHHHHHHHH
T ss_pred CCEEEEEECCCCCCCCCHHHHHH---HHHHhCCCceEEEEEcCcccc-----------cCCCCcEEEEECCHHHHHHHhc
Confidence 3456766643 234555555544 44433 47888888543110 0123444444444444444455
Q ss_pred CCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccccchh-------------h----hhhccccccccccccccc
Q 011954 151 ADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYFKL-------------E----YVKHLPFVAGAMIDSYTT 213 (474)
Q Consensus 151 ~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~-------------~----~~~~~~~~~~~~~~s~~~ 213 (474)
.++++.++..+..+ .......++.+.|+........ . ........+..++.+...
T Consensus 418 a~~~v~n~~~~~~~--------~k~~~~~~iq~wHG~~lK~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~s~~~ 489 (729)
T 3l7i_A 418 ASHWVSNARTPLYL--------NKKENQTYIQTWHGTPLKRLANDMKVVRMPGTTTPKYKRNFNRETSRWDYLISPNRYS 489 (729)
T ss_dssp EEEEEESSCCCTTS--------CCCTTCEEEECCSSCCSBCCGGGCSCCCCTTCCHHHHHHHHHHHHTTCSEEEESSHHH
T ss_pred CcEEEECCCCcccc--------ccCCCcEEEECCCCCchhhccccccccccccccCHHHHHHHHHhhccCCEEEeCCHHH
Confidence 66777766443211 1112356778888752111100 0 111123345555555554
Q ss_pred HHHHHHhHHHHhcCCCCCeEEEeCCCCcc--ccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccC----cc---
Q 011954 214 AEYWKNRTRERLGIRMPETYVVHLGNSKD--LMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRG----KG--- 284 (474)
Q Consensus 214 ~~~~~~~~~~~~~~~~~ki~vi~ngvd~~--~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~----Kg--- 284 (474)
.+. +.+.++++..+ ++..|.... .+.... ....++.+++++++++++.+|+|+-.+... +|
T Consensus 490 ~~~----~~~~f~~~~~~--i~~~G~PR~D~l~~~~~----~~~~~~~~~~~~~~~~~kk~ILyaPT~r~~~~~~~~~~~ 559 (729)
T 3l7i_A 490 TEI----FRSAFWMDEER--ILEIGYPRNDVLVNRAN----DQEYLDEIRTHLNLPSDKKVIMYAPTWRDDEFVSKGKYL 559 (729)
T ss_dssp HHH----HHHHTCCCGGG--EEESCCGGGHHHHHSTT----CHHHHHHHHHHTTCCSSCEEEEECCCCCGGGCCGGGSSC
T ss_pred HHH----HHHHhCCCcce--EEEcCCCchHHHhcccc----hHHHHHHHHHHhCCCCCCeEEEEeeeeeCCccccccccc
Confidence 444 44567776555 555565432 221111 112256789999999999999999765442 11
Q ss_pred --hHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCCCChHHHHhcCCEEEE
Q 011954 285 --QDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYLASIDVLVQ 362 (474)
Q Consensus 285 --~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv~v~ 362 (474)
...-++.+.+ .++ +++.+++-.-. .. .+.....+..+.+.-.....++.++|..||++|.
T Consensus 560 ~~~~~~~~~l~~---~l~------~~~~li~r~Hp------~~---~~~~~~~~~~~~~~~~~~~~di~~ll~~aD~lIT 621 (729)
T 3l7i_A 560 FELKIDLDNLYK---ELG------DDYVILLRMHY------LI---SNALDLSGYENFAIDVSNYNDVSELFLISDCLIT 621 (729)
T ss_dssp CCCTTCHHHHHH---HHT------TTEEEEECCCH------HH---HTTCCCTTCTTTEEECTTCSCHHHHHHTCSEEEE
T ss_pred cchhhHHHHHHH---HcC------CCeEEEEecCc------ch---hccccccccCCcEEeCCCCcCHHHHHHHhCEEEe
Confidence 1112233332 221 56776665432 11 1111112234556666666799999999999993
Q ss_pred cCCCCCCCCchHHHHHHhcCCCEEEcCCCCcceeeeeCCceeeecCCC-------CChHHHHHHHHHHhhC
Q 011954 363 NSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGK-------EGVTPLANNIVKLATH 426 (474)
Q Consensus 363 ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~~e~v~~~~~G~l~~~~d-------~~~~~la~~i~~ll~~ 426 (474)
+ ++-++.|++..++|||.... ...+.. ++..|+.++..+ .+.++|.++|......
T Consensus 622 ------D-ySSv~fD~~~l~kPiif~~~-D~~~Y~-~~~rg~y~d~~~~~pg~~~~~~~eL~~~i~~~~~~ 683 (729)
T 3l7i_A 622 ------D-YSSVMFDYGILKRPQFFFAY-DIDKYD-KGLRGFYMNYMEDLPGPIYTEPYGLAKELKNLDKV 683 (729)
T ss_dssp ------S-SCTHHHHHGGGCCCEEEECT-TTTTTT-SSCCSBSSCTTSSSSSCEESSHHHHHHHHTTHHHH
T ss_pred ------e-chHHHHhHHhhCCCEEEecC-CHHHHh-hccCCcccChhHhCCCCeECCHHHHHHHHhhhhcc
Confidence 2 45699999999999997731 111211 112333333211 1278999999877653
|
| >3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula} | Back alignment and structure |
|---|
Probab=97.84 E-value=0.00059 Score=64.27 Aligned_cols=110 Identities=16% Similarity=0.158 Sum_probs=70.9
Q ss_pred HHHHHhcCCCCC-CEEEEEecccccCcch--HHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHH
Q 011954 258 EHVRESLGVRDD-DLLFAIINSVSRGKGQ--DLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAE 334 (474)
Q Consensus 258 ~~~r~~~~~~~~-~~~i~~vgrl~~~Kg~--~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~ 334 (474)
+.+.+..|++.+ +++++..|.-.+.|.+ +.+.+.+..+.+ .+++++++|+.. ..+..++..+.
T Consensus 173 ~~~l~~~g~~~~~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~---------~g~~vvl~g~~~-----e~~~~~~i~~~ 238 (349)
T 3tov_A 173 QEFYSSHGLTDTDILIGFNIGSAVPEKRWPAERFAHVADYFGR---------LGYKTVFFGGPM-----DLEMVQPVVEQ 238 (349)
T ss_dssp HHHHHHTTCCTTCCEEEEECCCSSGGGCCCHHHHHHHHHHHHH---------HTCEEEECCCTT-----THHHHHHHHHT
T ss_pred HHHHHHcCCCCCCCEEEEeCCCCCccCCCCHHHHHHHHHHHHh---------CCCeEEEEeCcc-----hHHHHHHHHHh
Confidence 344556677644 4666667765556655 356666655543 256788888653 44555556555
Q ss_pred cCCCCeEEEecCC--CChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcC
Q 011954 335 KKIQDHVHFVNKT--LTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTA 389 (474)
Q Consensus 335 ~~l~~~v~~~g~~--~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~ 389 (474)
.+. ..+.+.|.. .++..+++.||++|.+- .|..-+ |.++|+|+|+--
T Consensus 239 ~~~-~~~~l~g~~sl~e~~ali~~a~~~i~~D------sG~~Hl-Aaa~g~P~v~lf 287 (349)
T 3tov_A 239 MET-KPIVATGKFQLGPLAAAMNRCNLLITND------SGPMHV-GISQGVPIVALY 287 (349)
T ss_dssp CSS-CCEECTTCCCHHHHHHHHHTCSEEEEES------SHHHHH-HHTTTCCEEEEC
T ss_pred ccc-ccEEeeCCCCHHHHHHHHHhCCEEEECC------CCHHHH-HHhcCCCEEEEE
Confidence 542 345666643 67899999999999653 244555 999999999863
|
| >2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A* | Back alignment and structure |
|---|
Probab=97.73 E-value=8.3e-05 Score=72.87 Aligned_cols=96 Identities=14% Similarity=0.047 Sum_probs=69.5
Q ss_pred CeEEEecCCCChHHHHh--cCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCc----ceeeeeC-CceeeecCCCC
Q 011954 339 DHVHFVNKTLTVSPYLA--SIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGT----MEIVVNG-TTGLLHPTGKE 411 (474)
Q Consensus 339 ~~v~~~g~~~~~~~~~~--~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~----~e~v~~~-~~G~l~~~~d~ 411 (474)
+++.+.++..+. ++|. ++|+|| .-+...+++||+++|+|+|+-...+- ...+.+. ..|+.++.++-
T Consensus 325 ~~~~v~~w~pq~-~vL~h~~~~~fv------th~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~~l~~~~~ 397 (456)
T 2c1x_A 325 GYGMVVPWAPQA-EVLAHEAVGAFV------THCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGGVF 397 (456)
T ss_dssp TTEEEESCCCHH-HHHTSTTEEEEE------ECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECGGGSC
T ss_pred CceEEecCCCHH-HHhcCCcCCEEE------ecCCcchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEEEecCCCc
Confidence 578888987664 6788 678888 44556799999999999999875432 2334445 67877764433
Q ss_pred ChHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Q 011954 412 GVTPLANNIVKLATHVERRLTMGKKGYERVK 442 (474)
Q Consensus 412 ~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~ 442 (474)
+.++++++|.++++|++ .++|++++++..+
T Consensus 398 ~~~~l~~~i~~ll~~~~-~~~~r~~a~~l~~ 427 (456)
T 2c1x_A 398 TKSGLMSCFDQILSQEK-GKKLRENLRALRE 427 (456)
T ss_dssp CHHHHHHHHHHHHHSHH-HHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCc-HHHHHHHHHHHHH
Confidence 38999999999999876 5666666665443
|
| >2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A* | Back alignment and structure |
|---|
Probab=97.60 E-value=0.0028 Score=58.97 Aligned_cols=136 Identities=11% Similarity=0.032 Sum_probs=77.3
Q ss_pred cCCCCCCEEEEEecccccCcchH--HHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeE
Q 011954 264 LGVRDDDLLFAIINSVSRGKGQD--LFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHV 341 (474)
Q Consensus 264 ~~~~~~~~~i~~vgrl~~~Kg~~--~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v 341 (474)
.+...++.+++..|.-.+.|... .+.+.+..+ .+ .++++++.++++ ...+..++..+..+ ++
T Consensus 173 ~~~~~~~~i~l~pga~~~~k~wp~~~~~~l~~~L----~~-----~~~~vvl~~g~~----~e~~~~~~i~~~~~---~~ 236 (326)
T 2gt1_A 173 LPTDAGEYAVFLHATTRDDKHWPEEHWRELIGLL----AD-----SGIRIKLPWGAP----HEEERAKRLAEGFA---YV 236 (326)
T ss_dssp CCTTTTSEEEEECCCSSGGGSCCHHHHHHHHHHT----TT-----TCCEEEECCSSH----HHHHHHHHHHTTCT---TE
T ss_pred ccccCCCEEEEEeCCCCccccCCHHHHHHHHHHH----HH-----CCCcEEEecCCH----HHHHHHHHHHhhCC---cc
Confidence 34445567777777656667665 444444444 22 467888874342 12333344443332 35
Q ss_pred EEecCC--CChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCC----------cceeeeeCCceeeecCC
Q 011954 342 HFVNKT--LTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGG----------TMEIVVNGTTGLLHPTG 409 (474)
Q Consensus 342 ~~~g~~--~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g----------~~e~v~~~~~G~l~~~~ 409 (474)
.+.|.. .++..+++.||++|..-. |..-+ |.|+|+|+|+--.+. ...++. +....+ ..-
T Consensus 237 ~l~g~~sl~el~ali~~a~l~I~~DS------G~~Hl-Aaa~g~P~v~lfg~t~p~~~~P~~~~~~~~~-~~~~cm-~~I 307 (326)
T 2gt1_A 237 EVLPKMSLEGVARVLAGAKFVVSVDT------GLSHL-TAALDRPNITVYGPTDPGLIGGYGKNQMVCR-APGNEL-SQL 307 (326)
T ss_dssp EECCCCCHHHHHHHHHTCSEEEEESS------HHHHH-HHHTTCCEEEEESSSCHHHHCCCSSSEEEEE-CGGGCG-GGC
T ss_pred cccCCCCHHHHHHHHHhCCEEEecCC------cHHHH-HHHcCCCEEEEECCCChhhcCCCCCCceEec-CCcccc-cCC
Confidence 666743 788899999999996532 44555 777999998752111 111221 111111 112
Q ss_pred CCChHHHHHHHHHHhhC
Q 011954 410 KEGVTPLANNIVKLATH 426 (474)
Q Consensus 410 d~~~~~la~~i~~ll~~ 426 (474)
+ +++..+++.++++.
T Consensus 308 ~--~~~V~~~i~~~l~~ 322 (326)
T 2gt1_A 308 T--ANAVKQFIEENAEK 322 (326)
T ss_dssp C--HHHHHHHHHHTTTT
T ss_pred C--HHHHHHHHHHHHHH
Confidence 3 78888888887753
|
| >3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A* | Back alignment and structure |
|---|
Probab=97.53 E-value=0.0011 Score=64.56 Aligned_cols=97 Identities=11% Similarity=-0.019 Sum_probs=67.5
Q ss_pred CeEEEecCCCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCc----ceeeeeC-CceeeecCCCCCh
Q 011954 339 DHVHFVNKTLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGT----MEIVVNG-TTGLLHPTGKEGV 413 (474)
Q Consensus 339 ~~v~~~g~~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~----~e~v~~~-~~G~l~~~~d~~~ 413 (474)
+++.+.++..+ ..++..+++-++-++ +.-.+++||+++|+|+|+-...+- ...+.+. ..|+.++.++-+.
T Consensus 327 ~~~~vv~w~Pq-~~vL~h~~v~~fvtH----~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~l~~~~~~~ 401 (454)
T 3hbf_A 327 TKGKIVAWAPQ-VEILKHSSVGVFLTH----SGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVDNGVLTK 401 (454)
T ss_dssp TTEEEESSCCH-HHHHHSTTEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEECGGGSCCH
T ss_pred CceEEEeeCCH-HHHHhhcCcCeEEec----CCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCeeEEecCCCCCH
Confidence 57888898765 588999995444443 345699999999999999865431 2234443 6777776544348
Q ss_pred HHHHHHHHHHhhCHHHHHHHHHHHHHHH
Q 011954 414 TPLANNIVKLATHVERRLTMGKKGYERV 441 (474)
Q Consensus 414 ~~la~~i~~ll~~~~~~~~~~~~~~~~~ 441 (474)
+++.++|.++++++ ..++|++++++..
T Consensus 402 ~~l~~av~~ll~~~-~~~~~r~~a~~l~ 428 (454)
T 3hbf_A 402 ESIKKALELTMSSE-KGGIMRQKIVKLK 428 (454)
T ss_dssp HHHHHHHHHHHSSH-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCC-hHHHHHHHHHHHH
Confidence 99999999999874 2455555555433
|
| >2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10 | Back alignment and structure |
|---|
Probab=97.51 E-value=0.0013 Score=64.99 Aligned_cols=95 Identities=16% Similarity=0.082 Sum_probs=68.1
Q ss_pred CeEEEecCCCChHHHHhcCCE--EEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCc----ceeee-eCCceeeecCCCC
Q 011954 339 DHVHFVNKTLTVSPYLASIDV--LVQNSQARGECFGRITIEAMAFQLPVLGTAAGGT----MEIVV-NGTTGLLHPTGKE 411 (474)
Q Consensus 339 ~~v~~~g~~~~~~~~~~~adv--~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~----~e~v~-~~~~G~l~~~~d~ 411 (474)
+++.+.++..++ ++|+.+++ || + -|...+++||+++|+|+|+-...+- ...+. +-..|+.++ .+-
T Consensus 353 ~~~~v~~~~pq~-~~L~h~~~~~~v--t----h~G~~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~-~~~ 424 (482)
T 2pq6_A 353 DRGLIASWCPQD-KVLNHPSIGGFL--T----HCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEID-TNV 424 (482)
T ss_dssp TTEEEESCCCHH-HHHTSTTEEEEE--E----CCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECC-SSC
T ss_pred CCEEEEeecCHH-HHhcCCCCCEEE--e----cCCcchHHHHHHcCCCEEecCcccchHHHHHHHHHHhCEEEEEC-CCC
Confidence 588999988665 58877666 66 3 3456799999999999999876532 22232 445777776 333
Q ss_pred ChHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Q 011954 412 GVTPLANNIVKLATHVERRLTMGKKGYERVK 442 (474)
Q Consensus 412 ~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~ 442 (474)
+.+++.++|.++++|++ .++|++++++...
T Consensus 425 ~~~~l~~~i~~ll~~~~-~~~~r~~a~~l~~ 454 (482)
T 2pq6_A 425 KREELAKLINEVIAGDK-GKKMKQKAMELKK 454 (482)
T ss_dssp CHHHHHHHHHHHHTSHH-HHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcCCc-HHHHHHHHHHHHH
Confidence 38999999999999886 4667777665543
|
| >1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7 | Back alignment and structure |
|---|
Probab=97.28 E-value=0.0012 Score=62.13 Aligned_cols=111 Identities=12% Similarity=0.125 Sum_probs=71.8
Q ss_pred HHHHHHhcCCC-CCCEEEEEecc-cccCcchH--HHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHH
Q 011954 257 REHVRESLGVR-DDDLLFAIINS-VSRGKGQD--LFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFV 332 (474)
Q Consensus 257 ~~~~r~~~~~~-~~~~~i~~vgr-l~~~Kg~~--~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~ 332 (474)
.+++++.++++ +++++++..|. ..+.|.+. .+.+++..|.+ .+++++++|+.. ..+..+++.
T Consensus 167 ~~~~~~~~~~~~~~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~---------~~~~vvl~g~~~-----e~~~~~~i~ 232 (348)
T 1psw_A 167 KSYTCNQFSLSSERPMIGFCPGAEFGPAKRWPHYHYAELAKQLID---------EGYQVVLFGSAK-----DHEAGNEIL 232 (348)
T ss_dssp HHHHHHHTTCCSSSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHH---------TTCEEEECCCGG-----GHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcEEEEECCCCccccCCCCHHHHHHHHHHHHH---------CCCeEEEEeChh-----hHHHHHHHH
Confidence 35567778876 44567777776 55667665 66666666644 368889988652 333344443
Q ss_pred HHcCC---CCeEEEecCC--CChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEc
Q 011954 333 AEKKI---QDHVHFVNKT--LTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGT 388 (474)
Q Consensus 333 ~~~~l---~~~v~~~g~~--~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s 388 (474)
+..+- ...+.+.|.. .++..+++.||++|.... |..-+ |.|+|+|+|+-
T Consensus 233 ~~~~~~~~~~~~~l~g~~sl~e~~ali~~a~l~I~~Ds------g~~Hl-Aaa~g~P~v~l 286 (348)
T 1psw_A 233 AALNTEQQAWCRNLAGETQLDQAVILIAACKAIVTNDS------GLMHV-AAALNRPLVAL 286 (348)
T ss_dssp TTSCHHHHTTEEECTTTSCHHHHHHHHHTSSEEEEESS------HHHHH-HHHTTCCEEEE
T ss_pred HhhhhccccceEeccCcCCHHHHHHHHHhCCEEEecCC------HHHHH-HHHcCCCEEEE
Confidence 33220 1234566753 688999999999997653 33333 99999999875
|
| >2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A | Back alignment and structure |
|---|
Probab=97.20 E-value=0.00021 Score=62.03 Aligned_cols=73 Identities=7% Similarity=-0.043 Sum_probs=53.4
Q ss_pred eEEEecCCCChHHHHh-cCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCc--------ceeeeeCCceeeecCCC
Q 011954 340 HVHFVNKTLTVSPYLA-SIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGT--------MEIVVNGTTGLLHPTGK 410 (474)
Q Consensus 340 ~v~~~g~~~~~~~~~~-~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~--------~e~v~~~~~G~l~~~~d 410 (474)
++...++.+++..+|. .||++| .-+...+++|++++|+|.|.-..+.. .+.+.+...++++ +
T Consensus 115 ~v~v~~f~~~m~~~l~~~AdlvI------shaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~~G~~~~~---~ 185 (224)
T 2jzc_A 115 KVIGFDFSTKMQSIIRDYSDLVI------SHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVELGYVWSC---A 185 (224)
T ss_dssp EEEECCSSSSHHHHHHHHCSCEE------ESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHHHSCCCEE---C
T ss_pred eEEEeeccchHHHHHHhcCCEEE------ECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHHCCCEEEc---C
Confidence 6777788899999999 999999 44567899999999999988765431 1123233345554 3
Q ss_pred CChHHHHHHHHHH
Q 011954 411 EGVTPLANNIVKL 423 (474)
Q Consensus 411 ~~~~~la~~i~~l 423 (474)
++.|+++|.++
T Consensus 186 --~~~L~~~i~~l 196 (224)
T 2jzc_A 186 --PTETGLIAGLR 196 (224)
T ss_dssp --SCTTTHHHHHH
T ss_pred --HHHHHHHHHHH
Confidence 56788888776
|
| >2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A* | Back alignment and structure |
|---|
Probab=97.14 E-value=0.0079 Score=58.87 Aligned_cols=87 Identities=18% Similarity=0.114 Sum_probs=60.6
Q ss_pred CeEEEecCCCChHHHHh--cCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCc----cee-eeeCCceeee-c---
Q 011954 339 DHVHFVNKTLTVSPYLA--SIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGT----MEI-VVNGTTGLLH-P--- 407 (474)
Q Consensus 339 ~~v~~~g~~~~~~~~~~--~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~----~e~-v~~~~~G~l~-~--- 407 (474)
+++.+.++..+. .+|. ++|+|| .-+...+++||+++|+|+|+-...+- ... ++.-..|+.+ .
T Consensus 332 ~~~~v~~w~pq~-~vL~h~~~~~fv------th~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv~~~g~g~~l~~~~~ 404 (463)
T 2acv_A 332 GKGMICGWAPQV-EVLAHKAIGGFV------SHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYR 404 (463)
T ss_dssp CSEEEESSCCHH-HHHHSTTEEEEE------ECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCSSCC
T ss_pred CCEEEEccCCHH-HHhCCCccCeEE------ecCCchhHHHHHHcCCCeeeccchhhhHHHHHHHHHHcCeEEEEecccC
Confidence 478888887665 5675 678888 34456799999999999999875432 223 3455678877 2
Q ss_pred CC--CCChHHHHHHHHHHhh-CHHHHHH
Q 011954 408 TG--KEGVTPLANNIVKLAT-HVERRLT 432 (474)
Q Consensus 408 ~~--d~~~~~la~~i~~ll~-~~~~~~~ 432 (474)
.+ ..+.+++.++|.++++ +++.+++
T Consensus 405 ~~~~~~~~~~l~~ai~~ll~~~~~~r~~ 432 (463)
T 2acv_A 405 KGSDVVAAEEIEKGLKDLMDKDSIVHKK 432 (463)
T ss_dssp TTCCCCCHHHHHHHHHHHTCTTCTHHHH
T ss_pred CCCccccHHHHHHHHHHHHhccHHHHHH
Confidence 22 2238999999999997 3444433
|
| >2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A* | Back alignment and structure |
|---|
Probab=97.05 E-value=0.017 Score=56.85 Aligned_cols=80 Identities=13% Similarity=-0.003 Sum_probs=55.5
Q ss_pred EEEecCCCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCc----cee-eeeCCceeeecCC---CCC
Q 011954 341 VHFVNKTLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGT----MEI-VVNGTTGLLHPTG---KEG 412 (474)
Q Consensus 341 v~~~g~~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~----~e~-v~~~~~G~l~~~~---d~~ 412 (474)
+.+.++..+. ++++.+++-++-++ |.-.+++||+++|+|+|+-...+- ... ++.-..|+.++.. ..+
T Consensus 341 ~~v~~w~Pq~-~vL~h~~v~~fvtH----gG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~l~~~~G~g~~l~~~~~~~~~ 415 (480)
T 2vch_A 341 FVIPFWAPQA-QVLAHPSTGGFLTH----CGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDGLVR 415 (480)
T ss_dssp EEEESCCCHH-HHHHSTTEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCCTTSCCC
T ss_pred EEEeCccCHH-HHhCCCCcCeEEec----ccchhHHHHHHcCCCEEeccccccchHHHHHHHHHhCeEEEeecccCCccC
Confidence 4555677554 89999996444343 345699999999999999875431 222 2345577776543 223
Q ss_pred hHHHHHHHHHHhh
Q 011954 413 VTPLANNIVKLAT 425 (474)
Q Consensus 413 ~~~la~~i~~ll~ 425 (474)
.++++++|.++++
T Consensus 416 ~~~l~~av~~vl~ 428 (480)
T 2vch_A 416 REEVARVVKGLME 428 (480)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhc
Confidence 8999999999998
|
| >1xv5_A AGT, DNA alpha-glucosyltransferase; HET: DNA CME UDP; 1.73A {Enterobacteria phage T4} PDB: 1y6f_A* 1y6g_A* 1ya6_A* 1y8z_A* | Back alignment and structure |
|---|
Probab=94.05 E-value=2.2 Score=35.44 Aligned_cols=337 Identities=15% Similarity=0.113 Sum_probs=170.3
Q ss_pred cCEEEEEecCC-CCCChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhcccchhccceeeeehhcH-HHHhhhcCC
Q 011954 74 SKLVLLVSHEL-SLSGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEHKMLDRGVQVLSAKGE-KAINTALNA 151 (474)
Q Consensus 74 ~~kIl~v~~~~-~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 151 (474)
.|+|+++.... ...|...+..+.-..+.++||+|+++......... . -...-+...++++-.+.. +.+..-...
T Consensus 1 smricifmarglegcgvtkfsleqrdwfiknghevtlvyakdksftr-t---sshdhksfsipvilakeydkalklvndc 76 (401)
T 1xv5_A 1 SMRICIFMARGLEGCGVTKFSLEQRDWFIKNGHEVTLVYAKDKSFTR-T---SSHDHKSFSIPVILAKEYDKALKLVNDC 76 (401)
T ss_dssp CCEEEEEETTCCCSSHHHHHHHHHHHHHHHTTCEEEEEEECSSCCTT-T---TSSSCTTTCEEECTTTCHHHHHHHHTSC
T ss_pred CceEEEEeeccccccCceeeehhhhhhhhcCCcEEEEEEeccccccc-c---ccccCccccceeEehhhhHHHhhhhccC
Confidence 37888887653 33566788888888999999999998754332111 0 011123334455433322 233334789
Q ss_pred CEEEEcccchhhHHhH-------Hhhhcccccccceeeeeeccccccch--hhhhhcccccccccccccccHHHHHHhHH
Q 011954 152 DLVVLNTAVAGKWLDG-------VLKDKVSQVLPKVLWWIHEMRGHYFK--LEYVKHLPFVAGAMIDSYTTAEYWKNRTR 222 (474)
Q Consensus 152 DiV~~~~~~~~~~~~~-------~~~~~~~~~~~~~v~~~h~~~~~~~~--~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 222 (474)
|++++++..+...-.. ++....|. .+++.+-|+-...... ...-...++++.++..+.. .++-+-...
T Consensus 77 diliinsvpatsvqeatinnykklldnikps--irvvvyqhdhsvlslrrnlgleetvrradvifshsdn-gdfnkvlmk 153 (401)
T 1xv5_A 77 DILIINSVPATSVQEATINNYKKLLDNIKPS--IRVVVYQHDHSVLSLRRNLGLEETVRRADVIFSHSDN-GDFNKVLMK 153 (401)
T ss_dssp SEEEEEECCBTTSCHHHHHHHHHHHHHSCTT--SEEEEEECCCSHHHHTTBSSHHHHHHHCSEEEESCTT-SHHHHTHHH
T ss_pred cEEEEccCccchhHHHHHhhHHHHHhcCCCc--eEEEEEeccchhhhhhhhcChHHhhhhhceEEecCCC-CcHHHHHHH
Confidence 9999887433221111 11112222 3556666643211111 1122223445555444332 222222222
Q ss_pred HHhcCCC------CCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCC---EEEEEecccccCcchHHHHHHHH
Q 011954 223 ERLGIRM------PETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDD---LLFAIINSVSRGKGQDLFLHSFY 293 (474)
Q Consensus 223 ~~~~~~~------~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~---~~i~~vgrl~~~Kg~~~ll~a~~ 293 (474)
+.|+-.. +..-.++| |.|.-+ .-.+|..+=-+... -+=-++||-..+||.-.+.+.-.
T Consensus 154 ewypetvslfddieeaptvyn------fqppmd-------ivkvrstywkdvseinmninrwigrtttwkgfyqmfdfhe 220 (401)
T 1xv5_A 154 EWYPETVSLFDDIEEAPTVYN------FQPPMD-------IVKVRSTYWKDVSEINMNINRWIGRTTTWKGFYQMFDFHE 220 (401)
T ss_dssp HHSCSSCCSSSCCCCCCCEEE------CCCCBC-------HHHHHHHHCCCGGGCEEEEEEEECCSCGGGCHHHHHHHHH
T ss_pred hhccchhhhhcchhhCCceec------cCCCce-------eeeeehhhhccHHHhhcchhhhhcccchhHhHHHHhhHHH
Confidence 2232110 11112222 222211 11233332211111 23347899999999988888776
Q ss_pred HHHHHHHHhccCCCc-EEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecC--------------------C-CChH
Q 011954 294 ESLQLIREKKLQVPS-MHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNK--------------------T-LTVS 351 (474)
Q Consensus 294 ~l~~~~~~~~~~~~~-~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~--------------------~-~~~~ 351 (474)
++.+ |. -.-++-|-. +.+ .+. .+++-|++ ..+.|. . .++.
T Consensus 221 kflk---------pagkstvmegle--rsp----afi-aikekgip--yeyygnreidkmnlapnqpaqildcyinseml 282 (401)
T 1xv5_A 221 KFLK---------PAGKSTVMEGLE--RSP----AFI-AIKEKGIP--YEYYGNREIDKMNLAPNQPAQILDCYINSEML 282 (401)
T ss_dssp HTTT---------TTTCEEEEECCC--CSH----HHH-HHHHTTCC--EEEECGGGGGGCCCSSSCCEEEESCCCHHHHH
T ss_pred HhcC---------ccchhhhhhhhh--cCC----ceE-EEcccCCc--hhhcCcchhhhhcCCCCCcchhhhheecHHHH
Confidence 6544 32 233444432 222 111 23344442 334442 1 3455
Q ss_pred HHHhcCCEEEEcCCCC----CCCCchHHHHHHhcCC-CEEEcCCCCcc-------eeeeeCCcee-eecCCCCChHHHHH
Q 011954 352 PYLASIDVLVQNSQAR----GECFGRITIEAMAFQL-PVLGTAAGGTM-------EIVVNGTTGL-LHPTGKEGVTPLAN 418 (474)
Q Consensus 352 ~~~~~adv~v~ps~~~----~E~~~~~~~EAma~G~-PvI~s~~~g~~-------e~v~~~~~G~-l~~~~d~~~~~la~ 418 (474)
+-++.+......|.-. ....-.+-+|--|||. ||.--..|..- -+..+ +.|+ .++.+| .++--+
T Consensus 283 ermsksgfgyqlsklnqkylqrsleythlelgacgtipvfwkstgenlkfrvdntpltsh-dsgiiwfdend--mestfe 359 (401)
T 1xv5_A 283 ERMSKSGFGYQLSKLNQKYLQRSLEYTHLELGACGTIPVFWKSTGENLKFRVDNTPLTSH-DSGIIWFDEND--MESTFE 359 (401)
T ss_dssp HHHHTEEEEEECCCCCGGGCSSCCCHHHHHHHHHTSEEEEEHHHHHHSBCTTTCCBGGGS-CCSCEEECTTC--HHHHHH
T ss_pred HHhhhcCcccchHHHHHHHHHhhhhhheeecccccceeeeecccCcceEEEecCCccccc-CCceEEecCCc--hHHHHH
Confidence 5566666655544320 2345678899999997 44433222111 11122 3444 467777 999999
Q ss_pred HHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHH
Q 011954 419 NIVKLATHVERRLTMGKKGYERVKDRFLEHHMS 451 (474)
Q Consensus 419 ~i~~ll~~~~~~~~~~~~~~~~~~~~fs~~~~~ 451 (474)
.|.++.+|..++.+-++.+++..-++-+..-..
T Consensus 360 rikelssdralydrerekayeflyqhqdssfcf 392 (401)
T 1xv5_A 360 RIKELSSDRALYDREREKAYEFLYQHQDSSFCF 392 (401)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHHHHHHBHHHHH
T ss_pred HHHHhccchhhhhHHHHHHHHHHHhcccccchh
Confidence 999999999999999999998876654444333
|
| >4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=89.86 E-value=0.49 Score=42.35 Aligned_cols=43 Identities=21% Similarity=0.033 Sum_probs=31.5
Q ss_pred ccccCEEEEEecCCCCCChh-HHHHHHHHHHHhcCcEEEEEeCC
Q 011954 71 FMKSKLVLLVSHELSLSGGP-LLLMELAFLLRGVGAEVVWITNQ 113 (474)
Q Consensus 71 ~~~~~kIl~v~~~~~~gG~~-~~~~~l~~~L~~~G~~V~v~~~~ 113 (474)
+|++||||+|.....+.+-. ......++.|.+.|++|.++-..
T Consensus 19 ~m~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~G~eV~v~DLy 62 (280)
T 4gi5_A 19 YFQSMKVLLIYAHPEPRSLNGALKNFAIRHLQQAGHEVQVSDLY 62 (280)
T ss_dssp ---CCEEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEEETT
T ss_pred hhhCCeEEEEEeCCCCccHHHHHHHHHHHHHHHCCCeEEEEEcc
Confidence 47789999999766665543 45667788999999999998743
|
| >3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0 | Back alignment and structure |
|---|
Probab=88.66 E-value=3.6 Score=31.96 Aligned_cols=112 Identities=14% Similarity=0.184 Sum_probs=73.3
Q ss_pred CcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCCCChHHHHhc--CCEEEEcCCCCCCCCchHHHHHHhc---
Q 011954 307 PSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYLAS--IDVLVQNSQARGECFGRITIEAMAF--- 381 (474)
Q Consensus 307 ~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~--adv~v~ps~~~~E~~~~~~~EAma~--- 381 (474)
...+++|+.+.+ .....++...++.+....+......++....+.. .|++++-..- .+.-|..+++.+..
T Consensus 4 ~~~~ILivdd~~----~~~~~l~~~L~~~~~~~~v~~~~~~~~a~~~l~~~~~dlii~D~~l-~~~~g~~~~~~lr~~~~ 78 (144)
T 3kht_A 4 RSKRVLVVEDNP----DDIALIRRVLDRKDIHCQLEFVDNGAKALYQVQQAKYDLIILDIGL-PIANGFEVMSAVRKPGA 78 (144)
T ss_dssp -CEEEEEECCCH----HHHHHHHHHHHHTTCCEEEEEESSHHHHHHHHTTCCCSEEEECTTC-GGGCHHHHHHHHHSSST
T ss_pred CCCEEEEEeCCH----HHHHHHHHHHHhcCCCeeEEEECCHHHHHHHhhcCCCCEEEEeCCC-CCCCHHHHHHHHHhccc
Confidence 356788888754 3667788888887764446555554454444433 5787775431 44557777777654
Q ss_pred --CCCEEEcCCCCc----ceeeeeCCceeeecCC-CCChHHHHHHHHHHhh
Q 011954 382 --QLPVLGTAAGGT----MEIVVNGTTGLLHPTG-KEGVTPLANNIVKLAT 425 (474)
Q Consensus 382 --G~PvI~s~~~g~----~e~v~~~~~G~l~~~~-d~~~~~la~~i~~ll~ 425 (474)
++|+|......- .+.+..|..+++..|. + .++|.++|..+++
T Consensus 79 ~~~~pii~~s~~~~~~~~~~~~~~ga~~~l~Kp~~~--~~~l~~~i~~~l~ 127 (144)
T 3kht_A 79 NQHTPIVILTDNVSDDRAKQCMAAGASSVVDKSSNN--VTDFYGRIYAIFS 127 (144)
T ss_dssp TTTCCEEEEETTCCHHHHHHHHHTTCSEEEECCTTS--HHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHcCCCEEEECCCCc--HHHHHHHHHHHHH
Confidence 678876432222 2334567889999998 8 9999999988874
|
| >1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1 | Back alignment and structure |
|---|
Probab=88.40 E-value=3.7 Score=31.46 Aligned_cols=110 Identities=11% Similarity=0.115 Sum_probs=71.9
Q ss_pred EEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCCCChHHHHh---------cCCEEEEcCCCCCCCCchHHHHHH
Q 011954 309 MHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYLA---------SIDVLVQNSQARGECFGRITIEAM 379 (474)
Q Consensus 309 ~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~---------~adv~v~ps~~~~E~~~~~~~EAm 379 (474)
.+++|+.+.+ .....+.+..+..|....+......++....+. ..|++++-... .+.-|..+++.+
T Consensus 3 ~~ilivdd~~----~~~~~l~~~L~~~~~~~~v~~~~~~~~a~~~l~~~~~~~~~~~~dlvi~d~~~-~~~~g~~~~~~l 77 (140)
T 1k68_A 3 KKIFLVEDNK----ADIRLIQEALANSTVPHEVVTVRDGMEAMAYLRQEGEYANASRPDLILLXLNL-PKKDGREVLAEI 77 (140)
T ss_dssp CEEEEECCCH----HHHHHHHHHHHTCSSCCEEEEECSHHHHHHHHTTCGGGGSCCCCSEEEECSSC-SSSCHHHHHHHH
T ss_pred CeEEEEeCCH----HHHHHHHHHHHhcCCCceEEEECCHHHHHHHHHcccccccCCCCcEEEEecCC-CcccHHHHHHHH
Confidence 4677777754 366778888887775446666666555555554 46888875431 344566677665
Q ss_pred h-----cCCCEEEc-CCCC---cceeeeeCCceeeecCCCCChHHHHHHHHHHhh
Q 011954 380 A-----FQLPVLGT-AAGG---TMEIVVNGTTGLLHPTGKEGVTPLANNIVKLAT 425 (474)
Q Consensus 380 a-----~G~PvI~s-~~~g---~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~ 425 (474)
. ..+|+|.- .... ..+....|..+++..|-+ .+++..+|..++.
T Consensus 78 ~~~~~~~~~pii~ls~~~~~~~~~~~~~~g~~~~l~kP~~--~~~l~~~i~~~~~ 130 (140)
T 1k68_A 78 KSDPTLKRIPVVVLSTSINEDDIFHSYDLHVNCYITKSAN--LSQLFQIVKGIEE 130 (140)
T ss_dssp HHSTTGGGSCEEEEESCCCHHHHHHHHHTTCSEEEECCSS--HHHHHHHHHHHHH
T ss_pred HcCcccccccEEEEecCCcHHHHHHHHHhchhheecCCCC--HHHHHHHHHHHHH
Confidence 4 46787654 3222 133344577899999988 9999999988864
|
| >2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A | Back alignment and structure |
|---|
Probab=87.14 E-value=1.4 Score=40.37 Aligned_cols=80 Identities=25% Similarity=0.223 Sum_probs=42.9
Q ss_pred cccccCEEEEEecCCCCCChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhcccchhccceeeeehh---------
Q 011954 70 NFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEHKMLDRGVQVLSAK--------- 140 (474)
Q Consensus 70 ~~~~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 140 (474)
.+|++|||+|+. ...+...+.++|.+.||+|..+..+.+.... ...+...-...+++++...
T Consensus 18 ~~~~~mrIvf~G-------~~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~~--~~~v~~~A~~~gIpv~~~~~~~~~~~~~ 88 (329)
T 2bw0_A 18 LYFQSMKIAVIG-------QSLFGQEVYCHLRKEGHEVVGVFTVPDKDGK--ADPLGLEAEKDGVPVFKYSRWRAKGQAL 88 (329)
T ss_dssp ---CCCEEEEEC-------CHHHHHHHHHHHHHTTCEEEEEEECCCCSSC--CCHHHHHHHHHTCCEEECSCCEETTEEC
T ss_pred ccCCCCEEEEEc-------CcHHHHHHHHHHHHCCCeEEEEEeCCCcCCC--CCHHHHHHHHcCCCEEecCccccccccc
Confidence 346679999982 3455556678888889998754432211100 0011222344455554332
Q ss_pred -cHHHHhhhcCCCEEEEcc
Q 011954 141 -GEKAINTALNADLVVLNT 158 (474)
Q Consensus 141 -~~~~~~~~~~~DiV~~~~ 158 (474)
.....++..++|++++-.
T Consensus 89 ~~~~~~l~~~~~Dliv~a~ 107 (329)
T 2bw0_A 89 PDVVAKYQALGAELNVLPF 107 (329)
T ss_dssp HHHHHHHHTTCCSEEEESS
T ss_pred HHHHHHHHhcCCCEEEEee
Confidence 223445568999999864
|
| >3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0 | Back alignment and structure |
|---|
Probab=86.46 E-value=3.8 Score=32.18 Aligned_cols=110 Identities=12% Similarity=0.139 Sum_probs=72.3
Q ss_pred cEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCCCChHHHHh-----------cCCEEEEcCCCCCCCCchHHH
Q 011954 308 SMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYLA-----------SIDVLVQNSQARGECFGRITI 376 (474)
Q Consensus 308 ~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~-----------~adv~v~ps~~~~E~~~~~~~ 376 (474)
..+++|+.+.+ .....+++..++.+....|......++....+. ..|++++-..- .+.-|..++
T Consensus 4 ~~~ILivddd~----~~~~~l~~~L~~~g~~~~v~~~~~~~~al~~l~~~~~~~~~~~~~~dliilD~~l-~~~~g~~~~ 78 (152)
T 3heb_A 4 SVTIVMIEDDL----GHARLIEKNIRRAGVNNEIIAFTDGTSALNYLFGDDKSGRVSAGRAQLVLLDLNL-PDMTGIDIL 78 (152)
T ss_dssp -CEEEEECCCH----HHHHHHHHHHHHTTCCCCEEEESSHHHHHHHHHCTTSSSGGGTTCBEEEEECSBC-SSSBHHHHH
T ss_pred CceEEEEeCCH----HHHHHHHHHHHhCCCcceEEEeCCHHHHHHHHhccccccccccCCCCEEEEeCCC-CCCcHHHHH
Confidence 45778887764 467778888888876546666665555555552 46777764331 445577777
Q ss_pred HHHhc-----CCCEEEcC-CCC---cceeeeeCCceeeecCCCCChHHHHHHHHHHh
Q 011954 377 EAMAF-----QLPVLGTA-AGG---TMEIVVNGTTGLLHPTGKEGVTPLANNIVKLA 424 (474)
Q Consensus 377 EAma~-----G~PvI~s~-~~g---~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll 424 (474)
+.+.. ++|+|... ... ..+....|..+++..|-+ .++|.++|.++.
T Consensus 79 ~~lr~~~~~~~~pii~~t~~~~~~~~~~~~~~g~~~~l~KP~~--~~~l~~~i~~~~ 133 (152)
T 3heb_A 79 KLVKENPHTRRSPVVILTTTDDQREIQRCYDLGANVYITKPVN--YENFANAIRQLG 133 (152)
T ss_dssp HHHHHSTTTTTSCEEEEESCCCHHHHHHHHHTTCSEEEECCSS--HHHHHHHHHHHH
T ss_pred HHHHhcccccCCCEEEEecCCCHHHHHHHHHCCCcEEEeCCCC--HHHHHHHHHHHH
Confidence 77654 57776543 322 123445577899999988 999999998874
|
| >3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=85.78 E-value=18 Score=31.90 Aligned_cols=214 Identities=11% Similarity=0.004 Sum_probs=100.1
Q ss_pred cccCEEEEEecCCCCCChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhcccchhccceeeeehhcHHHHhhhcCC
Q 011954 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEHKMLDRGVQVLSAKGEKAINTALNA 151 (474)
Q Consensus 72 ~~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (474)
.+..+|.++.+.....-....+..+.+++.+.|+++.++....+.... ..........++
T Consensus 6 ~~~~~Igvv~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~--------------------~~~~~~l~~~~v 65 (291)
T 3egc_A 6 KRSNVVGLIVSDIENVFFAEVASGVESEARHKGYSVLLANTAEDIVRE--------------------REAVGQFFERRV 65 (291)
T ss_dssp -CCCEEEEEESCTTSHHHHHHHHHHHHHHHHTTCEEEEEECTTCHHHH--------------------HHHHHHHHHTTC
T ss_pred CCCcEEEEEECCCcchHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHH--------------------HHHHHHHHHCCC
Confidence 346789999876432222355667777888899999988754321100 001122334689
Q ss_pred CEEEEcccch-hhHHhHHhhhcccccccceeeeeeccccccchhhhhhcccccccccccccccHHHHHHhHHHHhcCCCC
Q 011954 152 DLVVLNTAVA-GKWLDGVLKDKVSQVLPKVLWWIHEMRGHYFKLEYVKHLPFVAGAMIDSYTTAEYWKNRTRERLGIRMP 230 (474)
Q Consensus 152 DiV~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 230 (474)
|.|++..... ...+..+.. ...|++..-..... ..+..+..+.........+.+.+. ...
T Consensus 66 dgiIi~~~~~~~~~~~~~~~-----~~iPvV~~~~~~~~-----------~~~~~V~~D~~~~g~~a~~~L~~~---G~~ 126 (291)
T 3egc_A 66 DGLILAPSEGEHDYLRTELP-----KTFPIVAVNRELRI-----------PGCGAVLSENVRGARTAVEYLIAR---GHT 126 (291)
T ss_dssp SEEEECCCSSCCHHHHHSSC-----TTSCEEEESSCCCC-----------TTCEEEEECHHHHHHHHHHHHHHT---TCC
T ss_pred CEEEEeCCCCChHHHHHhhc-----cCCCEEEEecccCC-----------CCCCEEEECcHHHHHHHHHHHHHc---CCC
Confidence 9888765332 112222111 23455543322211 011222222223333333333322 345
Q ss_pred CeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHHHHHHHHHHHHHHHHhccCCCcEE
Q 011954 231 ETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMH 310 (474)
Q Consensus 231 ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~ 310 (474)
++-++....+..... .+...-.+.-++.+++.+...+ ..+......+...+.+.+ + ++++..
T Consensus 127 ~i~~i~~~~~~~~~~------~R~~gf~~~l~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~l----~-------~~~~~~ 188 (291)
T 3egc_A 127 RIGAIVGSAGLMTSR------ERLKGFRAAMSAAGLPVRQEWI-AAGGVRADNGRDGAIKVL----T-------GADRPT 188 (291)
T ss_dssp SEEEECSCTTSHHHH------HHHHHHHHHHHHTTCCCCGGGE-EC------CCHHHHHHHH----T-------C-CCCS
T ss_pred EEEEEeCCCCCcCHH------HHHHHHHHHHHHcCCCCCHHHe-EeCCCChhHHHHHHHHHH----h-------CCCCCc
Confidence 676665433211110 0000011223345665433222 345566666665544433 2 236677
Q ss_pred EEEEcCCCCcCchHHHHHHHHHHHcCCC--CeEEEecCC
Q 011954 311 AVVVGSDMNAQTKFETELRNFVAEKKIQ--DHVHFVNKT 347 (474)
Q Consensus 311 l~i~G~g~~~~~~~~~~l~~~~~~~~l~--~~v~~~g~~ 347 (474)
.+++.++. ....+.+.+++.|+. +.|.+.|+.
T Consensus 189 ai~~~~d~-----~a~g~~~al~~~g~~vP~di~vvg~d 222 (291)
T 3egc_A 189 ALLTSSHR-----ITEGAMQALNVLGLRYGPDVEIVSFD 222 (291)
T ss_dssp EEEESSHH-----HHHHHHHHHHHHTCCBTTTBEEEEES
T ss_pred EEEECCcH-----HHHHHHHHHHHcCCCCCCceEEEEec
Confidence 78877652 444566777777764 788889875
|
| >3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405} | Back alignment and structure |
|---|
Probab=85.74 E-value=3.8 Score=31.71 Aligned_cols=110 Identities=12% Similarity=0.127 Sum_probs=69.2
Q ss_pred EEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCCCChHHHHh----cCCEEEEcCCCCCCCCchHHHHHHh---c
Q 011954 309 MHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYLA----SIDVLVQNSQARGECFGRITIEAMA---F 381 (474)
Q Consensus 309 ~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~----~adv~v~ps~~~~E~~~~~~~EAma---~ 381 (474)
.+++|+.+.+ .....++....+.+. .+......++....+. ..|++++-... .+.-|..+++.+. .
T Consensus 4 ~~ilivdd~~----~~~~~l~~~l~~~g~--~v~~~~~~~~a~~~~~~~~~~~dlvi~d~~l-~~~~g~~~~~~l~~~~~ 76 (143)
T 3jte_A 4 AKILVIDDES----TILQNIKFLLEIDGN--EVLTASSSTEGLRIFTENCNSIDVVITDMKM-PKLSGMDILREIKKITP 76 (143)
T ss_dssp CEEEEECSCH----HHHHHHHHHHHHTTC--EEEEESSHHHHHHHHHHTTTTCCEEEEESCC-SSSCHHHHHHHHHHHCT
T ss_pred CEEEEEcCCH----HHHHHHHHHHHhCCc--eEEEeCCHHHHHHHHHhCCCCCCEEEEeCCC-CCCcHHHHHHHHHHhCC
Confidence 4677777654 356677777777663 4554444444444443 56887775432 4445666665543 3
Q ss_pred CCCEEEc-CCCC---cceeeeeCCceeeecCCCCChHHHHHHHHHHhhCH
Q 011954 382 QLPVLGT-AAGG---TMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHV 427 (474)
Q Consensus 382 G~PvI~s-~~~g---~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~ 427 (474)
.+|+|.- .... ..+.+..|..+++..|-+ .++|..+|..++...
T Consensus 77 ~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kp~~--~~~l~~~l~~~~~~~ 124 (143)
T 3jte_A 77 HMAVIILTGHGDLDNAILAMKEGAFEYLRKPVT--AQDLSIAINNAINRK 124 (143)
T ss_dssp TCEEEEEECTTCHHHHHHHHHTTCSEEEESSCC--HHHHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCHHHHHHHHHhCcceeEeCCCC--HHHHHHHHHHHHHHH
Confidence 6777654 3222 233455677899999988 999999999988643
|
| >2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans} | Back alignment and structure |
|---|
Probab=85.04 E-value=4.3 Score=31.59 Aligned_cols=110 Identities=7% Similarity=0.138 Sum_probs=70.6
Q ss_pred CcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCCCChHHHHh--cCCEEEEcCCCCCCCCchHHHHHHhc---
Q 011954 307 PSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYLA--SIDVLVQNSQARGECFGRITIEAMAF--- 381 (474)
Q Consensus 307 ~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~--~adv~v~ps~~~~E~~~~~~~EAma~--- 381 (474)
...+++|+.+.+ .....+.......|. .|......++....+. ..|++++-... .+.-|..+++.+..
T Consensus 7 ~~~~iLivd~~~----~~~~~l~~~L~~~g~--~v~~~~~~~~a~~~l~~~~~dlii~d~~l-~~~~g~~~~~~l~~~~~ 79 (147)
T 2zay_A 7 KWWRIMLVDTQL----PALAASISALSQEGF--DIIQCGNAIEAVPVAVKTHPHLIITEANM-PKISGMDLFNSLKKNPQ 79 (147)
T ss_dssp -CEEEEEECTTG----GGGHHHHHHHHHHTE--EEEEESSHHHHHHHHHHHCCSEEEEESCC-SSSCHHHHHHHHHTSTT
T ss_pred CCceEEEEeCCH----HHHHHHHHHHHHcCC--eEEEeCCHHHHHHHHHcCCCCEEEEcCCC-CCCCHHHHHHHHHcCcc
Confidence 457788888764 356677777776664 4554444444444433 36888875431 34456777777664
Q ss_pred --CCCEEEc-CCCCc---ceeeeeCCceeeecCCCCChHHHHHHHHHHhh
Q 011954 382 --QLPVLGT-AAGGT---MEIVVNGTTGLLHPTGKEGVTPLANNIVKLAT 425 (474)
Q Consensus 382 --G~PvI~s-~~~g~---~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~ 425 (474)
.+|+|.- ..... .+.+..|..+++..|-+ .++|..+|..++.
T Consensus 80 ~~~~pii~ls~~~~~~~~~~~~~~g~~~~l~kp~~--~~~L~~~i~~~~~ 127 (147)
T 2zay_A 80 TASIPVIALSGRATAKEEAQLLDMGFIDFIAKPVN--AIRLSARIKRVLK 127 (147)
T ss_dssp TTTSCEEEEESSCCHHHHHHHHHHTCSEEEESSCC--HHHHHHHHHHHHH
T ss_pred cCCCCEEEEeCCCCHHHHHHHHhCCCCEEEeCCCC--HHHHHHHHHHHHH
Confidence 6787654 33322 22345577899999988 9999999998875
|
| >2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=84.81 E-value=1.5 Score=38.48 Aligned_cols=40 Identities=20% Similarity=0.196 Sum_probs=28.5
Q ss_pred cCEEEEEecCCCCCChhHHHHHHHHHHHhcCcEEEEEeCCCCCC
Q 011954 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWITNQKPNE 117 (474)
Q Consensus 74 ~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~ 117 (474)
|+|||+.+.+... ..-+..|+++|.+.| +|+|+++.....
T Consensus 1 Mp~ILlTNDDGi~---apGi~~L~~~l~~~g-~V~VvAP~~~~S 40 (251)
T 2wqk_A 1 MPTFLLVNDDGYF---SPGINALREALKSLG-RVVVVAPDRNLS 40 (251)
T ss_dssp -CEEEEECSSCTT---CHHHHHHHHHHTTTS-EEEEEEESSCCT
T ss_pred CCEEEEEcCCCCC---cHHHHHHHHHHHhCC-CEEEEeeCCCCc
Confidence 5689988875322 145888999999998 699998665443
|
| >1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A | Back alignment and structure |
|---|
Probab=84.66 E-value=8.3 Score=30.23 Aligned_cols=110 Identities=8% Similarity=0.130 Sum_probs=67.6
Q ss_pred cEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCCCChHHHHh--cCCEEEEcCCCCCCCCchHHHHHHh---cC
Q 011954 308 SMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYLA--SIDVLVQNSQARGECFGRITIEAMA---FQ 382 (474)
Q Consensus 308 ~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~--~adv~v~ps~~~~E~~~~~~~EAma---~G 382 (474)
..+++|+.+.+ .....+.......|. .|......++....+. ..|++++-... .+.-|..+++.+. ..
T Consensus 3 ~~~ILivdd~~----~~~~~l~~~L~~~g~--~v~~~~~~~~a~~~l~~~~~dliild~~l-~~~~g~~~~~~l~~~~~~ 75 (155)
T 1qkk_A 3 APSVFLIDDDR----DLRKAMQQTLELAGF--TVSSFASATEALAGLSADFAGIVISDIRM-PGMDGLALFRKILALDPD 75 (155)
T ss_dssp -CEEEEECSCH----HHHHHHHHHHHHTTC--EEEEESCHHHHHHTCCTTCCSEEEEESCC-SSSCHHHHHHHHHHHCTT
T ss_pred CCEEEEEeCCH----HHHHHHHHHHHHcCc--EEEEECCHHHHHHHHHhCCCCEEEEeCCC-CCCCHHHHHHHHHhhCCC
Confidence 45677787764 356677777777664 4554443333333332 35887764431 3344666666553 46
Q ss_pred CCEEEc-CCCC---cceeeeeCCceeeecCCCCChHHHHHHHHHHhhC
Q 011954 383 LPVLGT-AAGG---TMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATH 426 (474)
Q Consensus 383 ~PvI~s-~~~g---~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~ 426 (474)
+|+|.. .... ..+.+..|..+++..|-+ .++|..+|..++..
T Consensus 76 ~pii~ls~~~~~~~~~~~~~~g~~~~l~kP~~--~~~L~~~i~~~~~~ 121 (155)
T 1qkk_A 76 LPMILVTGHGDIPMAVQAIQDGAYDFIAKPFA--ADRLVQSARRAEEK 121 (155)
T ss_dssp SCEEEEECGGGHHHHHHHHHTTCCEEEESSCC--HHHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHhcCCCeEEeCCCC--HHHHHHHHHHHHHH
Confidence 888754 3222 233344577899999988 99999999998764
|
| >2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A* | Back alignment and structure |
|---|
Probab=84.39 E-value=1.2 Score=37.38 Aligned_cols=40 Identities=20% Similarity=0.112 Sum_probs=30.3
Q ss_pred cccCEEEEEecCCCCCCh-hHHHHHHHHHHHhcCcEEEEEeCC
Q 011954 72 MKSKLVLLVSHELSLSGG-PLLLMELAFLLRGVGAEVVWITNQ 113 (474)
Q Consensus 72 ~~~~kIl~v~~~~~~gG~-~~~~~~l~~~L~~~G~~V~v~~~~ 113 (474)
|+||||+++... ++|. ...+..+++.+.+.|++|.++...
T Consensus 3 M~M~kilii~~S--~~g~T~~la~~i~~~l~~~g~~v~~~~l~ 43 (200)
T 2a5l_A 3 MSSPYILVLYYS--RHGATAEMARQIARGVEQGGFEARVRTVP 43 (200)
T ss_dssp --CCEEEEEECC--SSSHHHHHHHHHHHHHHHTTCEEEEEBCC
T ss_pred CCcceEEEEEeC--CCChHHHHHHHHHHHHhhCCCEEEEEEhh
Confidence 557799999865 3454 577888899999999999988754
|
| >3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901} | Back alignment and structure |
|---|
Probab=84.38 E-value=11 Score=28.79 Aligned_cols=109 Identities=14% Similarity=0.085 Sum_probs=69.1
Q ss_pred cEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCCCChHHHHh---cCCEEEEcCCCCCC-CCchHHHHHHh--c
Q 011954 308 SMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYLA---SIDVLVQNSQARGE-CFGRITIEAMA--F 381 (474)
Q Consensus 308 ~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~---~adv~v~ps~~~~E-~~~~~~~EAma--~ 381 (474)
+.+++|+.+.+ .....+....++.|. .|......++....+. ..|++++-..- .+ .-|..+++.+. .
T Consensus 5 ~~~ilivdd~~----~~~~~l~~~L~~~g~--~v~~~~~~~~a~~~l~~~~~~dlvi~D~~l-~~~~~g~~~~~~l~~~~ 77 (140)
T 3h5i_A 5 DKKILIVEDSK----FQAKTIANILNKYGY--TVEIALTGEAAVEKVSGGWYPDLILMDIEL-GEGMDGVQTALAIQQIS 77 (140)
T ss_dssp -CEEEEECSCH----HHHHHHHHHHHHTTC--EEEEESSHHHHHHHHHTTCCCSEEEEESSC-SSSCCHHHHHHHHHHHC
T ss_pred CcEEEEEeCCH----HHHHHHHHHHHHcCC--EEEEecChHHHHHHHhcCCCCCEEEEeccC-CCCCCHHHHHHHHHhCC
Confidence 45778887754 366777777777764 4554444444444443 35888775431 23 45666666554 4
Q ss_pred CCCEEEcC-CCC---cceeeeeCCceeeecCCCCChHHHHHHHHHHhh
Q 011954 382 QLPVLGTA-AGG---TMEIVVNGTTGLLHPTGKEGVTPLANNIVKLAT 425 (474)
Q Consensus 382 G~PvI~s~-~~g---~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~ 425 (474)
.+|+|.-. ... ..+....|..+++..|-+ .++|.++|..++.
T Consensus 78 ~~~ii~ls~~~~~~~~~~~~~~g~~~~l~KP~~--~~~l~~~i~~~l~ 123 (140)
T 3h5i_A 78 ELPVVFLTAHTEPAVVEKIRSVTAYGYVMKSAT--EQVLITIVEMALR 123 (140)
T ss_dssp CCCEEEEESSSSCCCCGGGGGSCEEEEEETTCC--HHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHhCCCcEEEeCCCC--HHHHHHHHHHHHH
Confidence 78887643 222 233444577899999988 9999999998875
|
| >3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=84.01 E-value=6.3 Score=30.38 Aligned_cols=114 Identities=8% Similarity=-0.041 Sum_probs=71.1
Q ss_pred CcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCCCChHHHHhc-------CCEEEEcCCCCCCCCchHHHHHH
Q 011954 307 PSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYLAS-------IDVLVQNSQARGECFGRITIEAM 379 (474)
Q Consensus 307 ~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~-------adv~v~ps~~~~E~~~~~~~EAm 379 (474)
...+++|+.+.+ .....+.......+....+......++....+.. .|++++-..- .+.-|+.+++.+
T Consensus 8 ~~~~iLivdd~~----~~~~~l~~~l~~~~~~~~v~~~~~~~~a~~~l~~~~~~~~~~dlvi~D~~l-~~~~g~~~~~~l 82 (146)
T 3ilh_A 8 KIDSVLLIDDDD----IVNFLNTTIIRMTHRVEEIQSVTSGNAAINKLNELYAAGRWPSIICIDINM-PGINGWELIDLF 82 (146)
T ss_dssp CEEEEEEECSCH----HHHHHHHHHHHTTCCEEEEEEESSHHHHHHHHHHHHTSSCCCSEEEEESSC-SSSCHHHHHHHH
T ss_pred ccceEEEEeCCH----HHHHHHHHHHHhcCCCeeeeecCCHHHHHHHHHHhhccCCCCCEEEEcCCC-CCCCHHHHHHHH
Confidence 456778887753 3556677777766643345555544455555543 6888775432 445567777665
Q ss_pred hc-------CCCEEEcCCCCc----ceeeeeC-CceeeecCCCCChHHHHHHHHHHhhCH
Q 011954 380 AF-------QLPVLGTAAGGT----MEIVVNG-TTGLLHPTGKEGVTPLANNIVKLATHV 427 (474)
Q Consensus 380 a~-------G~PvI~s~~~g~----~e~v~~~-~~G~l~~~~d~~~~~la~~i~~ll~~~ 427 (474)
.. ..|+|......- .+....+ ..+++..|-+ .++|.++|.+.....
T Consensus 83 ~~~~~~~~~~~~ii~~t~~~~~~~~~~~~~~g~~~~~l~KP~~--~~~L~~~i~~~~~~~ 140 (146)
T 3ilh_A 83 KQHFQPMKNKSIVCLLSSSLDPRDQAKAEASDWVDYYVSKPLT--ANALNNLYNKVLNEG 140 (146)
T ss_dssp HHHCGGGTTTCEEEEECSSCCHHHHHHHHHCSSCCEEECSSCC--HHHHHHHHHHHHCC-
T ss_pred HHhhhhccCCCeEEEEeCCCChHHHHHHHhcCCcceeeeCCCC--HHHHHHHHHHHHHhc
Confidence 43 567665432221 2233445 7789999998 999999999988754
|
| >3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=83.89 E-value=8.8 Score=29.35 Aligned_cols=109 Identities=10% Similarity=0.046 Sum_probs=69.0
Q ss_pred cEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCCCChHHHHh--cCCEEEEcCCCCCCCCchHHHHHHhc----
Q 011954 308 SMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYLA--SIDVLVQNSQARGECFGRITIEAMAF---- 381 (474)
Q Consensus 308 ~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~--~adv~v~ps~~~~E~~~~~~~EAma~---- 381 (474)
..+++|+.+.+ .....++....+.|. .+......++....+. ..|++++-..- .+.-|..+++.+..
T Consensus 6 ~~~iLivdd~~----~~~~~l~~~l~~~g~--~v~~~~~~~~a~~~l~~~~~dlvi~d~~l-~~~~g~~~~~~l~~~~~~ 78 (140)
T 3grc_A 6 RPRILICEDDP----DIARLLNLMLEKGGF--DSDMVHSAAQALEQVARRPYAAMTVDLNL-PDQDGVSLIRALRRDSRT 78 (140)
T ss_dssp CSEEEEECSCH----HHHHHHHHHHHHTTC--EEEEECSHHHHHHHHHHSCCSEEEECSCC-SSSCHHHHHHHHHTSGGG
T ss_pred CCCEEEEcCCH----HHHHHHHHHHHHCCC--eEEEECCHHHHHHHHHhCCCCEEEEeCCC-CCCCHHHHHHHHHhCccc
Confidence 45677777653 356667777777664 3544444334334332 35787775432 44557777777654
Q ss_pred -CCCEEEcCCCC----cc-eeeeeCCceeeecCCCCChHHHHHHHHHHhh
Q 011954 382 -QLPVLGTAAGG----TM-EIVVNGTTGLLHPTGKEGVTPLANNIVKLAT 425 (474)
Q Consensus 382 -G~PvI~s~~~g----~~-e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~ 425 (474)
.+|+|.-.... .. +....|..+++..|-+ .++|..+|..+++
T Consensus 79 ~~~~ii~~s~~~~~~~~~~~~~~~g~~~~l~kP~~--~~~l~~~i~~~l~ 126 (140)
T 3grc_A 79 RDLAIVVVSANAREGELEFNSQPLAVSTWLEKPID--ENLLILSLHRAID 126 (140)
T ss_dssp TTCEEEEECTTHHHHHHHHCCTTTCCCEEECSSCC--HHHHHHHHHHHHH
T ss_pred CCCCEEEEecCCChHHHHHHhhhcCCCEEEeCCCC--HHHHHHHHHHHHH
Confidence 67877643222 12 4445577889999988 9999999999875
|
| >1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1 | Back alignment and structure |
|---|
Probab=83.72 E-value=6.6 Score=30.38 Aligned_cols=111 Identities=8% Similarity=0.077 Sum_probs=72.2
Q ss_pred cEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCCCChHHHHh------------cCCEEEEcCCCCCCCCchHH
Q 011954 308 SMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYLA------------SIDVLVQNSQARGECFGRIT 375 (474)
Q Consensus 308 ~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~------------~adv~v~ps~~~~E~~~~~~ 375 (474)
..+++|+.+.+ .....++...++.+....+......++....+. ..|++++-..- .+.-|..+
T Consensus 6 ~~~iLivdd~~----~~~~~l~~~L~~~g~~~~v~~~~~~~~al~~l~~~~~~~~~~~~~~~dlvi~D~~l-~~~~g~~~ 80 (149)
T 1k66_A 6 TQPLLVVEDSD----EDFSTFQRLLQREGVVNPIYRCITGDQALDFLYQTGSYCNPDIAPRPAVILLDLNL-PGTDGREV 80 (149)
T ss_dssp TSCEEEECCCH----HHHHHHHHHHHHTTBCSCEEEECSHHHHHHHHHTCCSSSCGGGCCCCSEEEECSCC-SSSCHHHH
T ss_pred CccEEEEECCH----HHHHHHHHHHHHcCCCceEEEECCHHHHHHHHHhcccccCcccCCCCcEEEEECCC-CCCCHHHH
Confidence 45677787754 366777888887775435666665555555554 46888775431 34456777
Q ss_pred HHHHh-----cCCCEEEc-CCCC---cceeeeeCCceeeecCCCCChHHHHHHHHHHhh
Q 011954 376 IEAMA-----FQLPVLGT-AAGG---TMEIVVNGTTGLLHPTGKEGVTPLANNIVKLAT 425 (474)
Q Consensus 376 ~EAma-----~G~PvI~s-~~~g---~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~ 425 (474)
++.+. ..+|+|.. .... ..+....|..+++..|-+ .++|.++|..+++
T Consensus 81 ~~~l~~~~~~~~~~ii~~t~~~~~~~~~~~~~~g~~~~l~kP~~--~~~l~~~i~~~~~ 137 (149)
T 1k66_A 81 LQEIKQDEVLKKIPVVIMTTSSNPKDIEICYSYSISSYIVKPLE--IDRLTETVQTFIK 137 (149)
T ss_dssp HHHHTTSTTGGGSCEEEEESCCCHHHHHHHHHTTCSEEEECCSS--HHHHHHHHHHHHH
T ss_pred HHHHHhCcccCCCeEEEEeCCCCHHHHHHHHHCCCCEEEeCCCC--HHHHHHHHHHHHH
Confidence 77765 45777654 3322 123344577899999988 9999999988864
|
| >1i3c_A Response regulator RCP1; phytochrome, signaling protein; 1.90A {Synechocystis SP} SCOP: c.23.1.1 PDB: 1jlk_A | Back alignment and structure |
|---|
Probab=83.38 E-value=8.4 Score=30.03 Aligned_cols=111 Identities=10% Similarity=0.148 Sum_probs=67.9
Q ss_pred CcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCCCChHHHHh---------cCCEEEEcCCCCCCCCchHHHH
Q 011954 307 PSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYLA---------SIDVLVQNSQARGECFGRITIE 377 (474)
Q Consensus 307 ~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~---------~adv~v~ps~~~~E~~~~~~~E 377 (474)
...+++|+.+.+ .....++...+..+....|.......+...++. ..|++++=-.- .+.-|..+++
T Consensus 7 ~~~~ILivdd~~----~~~~~l~~~L~~~~~~~~v~~~~~~~~al~~l~~~~~~~~~~~~dlillD~~l-p~~~g~~l~~ 81 (149)
T 1i3c_A 7 PPKVILLVEDSK----ADSRLVQEVLKTSTIDHELIILRDGLAAMAFLQQQGEYENSPRPNLILLDLNL-PKKDGREVLA 81 (149)
T ss_dssp CCEEEEEECCCH----HHHHHHHHHHHSCCSCEEEEEECSHHHHHHHHTTCGGGTTCCCCSEEEECSCC-SSSCHHHHHH
T ss_pred CCCeEEEEECCH----HHHHHHHHHHHhcCCCccEEEeCCHHHHHHHHHhccccccCCCCCEEEEeCCC-CCCcHHHHHH
Confidence 356778887754 356667777776654334544444344444444 36888874331 3334666777
Q ss_pred HHh-----cCCCEEEc-CCCC---cceeeeeCCceeeecCCCCChHHHHHHHHHHh
Q 011954 378 AMA-----FQLPVLGT-AAGG---TMEIVVNGTTGLLHPTGKEGVTPLANNIVKLA 424 (474)
Q Consensus 378 Ama-----~G~PvI~s-~~~g---~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll 424 (474)
.+. ..+|+|.- .... ..+.+..|..|++..|-+ .++|.++|..++
T Consensus 82 ~l~~~~~~~~~piiils~~~~~~~~~~~~~~ga~~~l~KP~~--~~~L~~~i~~~~ 135 (149)
T 1i3c_A 82 EIKQNPDLKRIPVVVLTTSHNEDDVIASYELHVNCYLTKSRN--LKDLFKMVQGIE 135 (149)
T ss_dssp HHHHCTTTTTSCEEEEESCCCHHHHHHHHHTTCSEEEECCSS--HHHHHHHHHHHH
T ss_pred HHHhCcCcCCCeEEEEECCCChHHHHHHHHcCCcEEEECCCC--HHHHHHHHHHHH
Confidence 664 35677654 3332 233345577899999988 999999988774
|
| >3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1} | Back alignment and structure |
|---|
Probab=83.06 E-value=7.3 Score=29.89 Aligned_cols=110 Identities=11% Similarity=0.061 Sum_probs=68.7
Q ss_pred CcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCCCChHHHHhc--CCEEEEcCCCCCCCCchHHHHHHhc---
Q 011954 307 PSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYLAS--IDVLVQNSQARGECFGRITIEAMAF--- 381 (474)
Q Consensus 307 ~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~--adv~v~ps~~~~E~~~~~~~EAma~--- 381 (474)
...+++|+.+.+ .....+....+..|. .|......++....+.. .|++++-... .+.-|..+++.+..
T Consensus 6 ~~~~iLivdd~~----~~~~~l~~~L~~~g~--~v~~~~~~~~a~~~l~~~~~dlii~d~~l-~~~~g~~~~~~l~~~~~ 78 (142)
T 3cg4_A 6 HKGDVMIVDDDA----HVRIAVKTILSDAGF--HIISADSGGQCIDLLKKGFSGVVLLDIMM-PGMDGWDTIRAILDNSL 78 (142)
T ss_dssp CCCEEEEECSCH----HHHHHHHHHHHHTTC--EEEEESSHHHHHHHHHTCCCEEEEEESCC-SSSCHHHHHHHHHHTTC
T ss_pred CCCeEEEEcCCH----HHHHHHHHHHHHCCe--EEEEeCCHHHHHHHHHhcCCCEEEEeCCC-CCCCHHHHHHHHHhhcc
Confidence 456778887754 356677777777764 45555444444444443 5777764331 34456777777653
Q ss_pred --CCCEEEc-CCCC---cceeeeeCCceeeecCCCCChHHHHHHHHHHhh
Q 011954 382 --QLPVLGT-AAGG---TMEIVVNGTTGLLHPTGKEGVTPLANNIVKLAT 425 (474)
Q Consensus 382 --G~PvI~s-~~~g---~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~ 425 (474)
.+|+|.- .... ..+.+..|..+++..|-+ .++|.++|..++.
T Consensus 79 ~~~~pii~~s~~~~~~~~~~~~~~g~~~~l~kp~~--~~~l~~~i~~~~~ 126 (142)
T 3cg4_A 79 EQGIAIVMLTAKNAPDAKMIGLQEYVVDYITKPFD--NEDLIEKTTFFMG 126 (142)
T ss_dssp CTTEEEEEEECTTCCCCSSTTGGGGEEEEEESSCC--HHHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCCHHHHHHHHhcCccEEEeCCCC--HHHHHHHHHHHHH
Confidence 4677653 3222 233344566789999888 9999999988874
|
| >3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A | Back alignment and structure |
|---|
Probab=82.99 E-value=8.4 Score=29.05 Aligned_cols=110 Identities=15% Similarity=0.195 Sum_probs=69.5
Q ss_pred cEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCCCChHHHH-h--cCCEEEEcCCCCCCCCchHHHHHHhc---
Q 011954 308 SMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYL-A--SIDVLVQNSQARGECFGRITIEAMAF--- 381 (474)
Q Consensus 308 ~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~-~--~adv~v~ps~~~~E~~~~~~~EAma~--- 381 (474)
..+++|+.+.+ .....+++..++.|.. .+.......+....+ . ..|++++-..- .+.-|..+++.+..
T Consensus 5 ~~~iLivdd~~----~~~~~l~~~L~~~g~~-~v~~~~~~~~a~~~~~~~~~~dlvi~D~~~-p~~~g~~~~~~lr~~~~ 78 (129)
T 3h1g_A 5 SMKLLVVDDSS----TMRRIIKNTLSRLGYE-DVLEAEHGVEAWEKLDANADTKVLITDWNM-PEMNGLDLVKKVRSDSR 78 (129)
T ss_dssp -CCEEEECSCH----HHHHHHHHHHHHTTCC-CEEEESSHHHHHHHHHHCTTCCEEEECSCC-SSSCHHHHHHHHHTSTT
T ss_pred CcEEEEEeCCH----HHHHHHHHHHHHcCCc-EEEEeCCHHHHHHHHHhCCCCCEEEEeCCC-CCCCHHHHHHHHHhcCC
Confidence 45678887754 4667788888877753 344444333333333 2 36887764331 44457778877653
Q ss_pred --CCCEEEcC-CCCc---ceeeeeCCceeeecCCCCChHHHHHHHHHHhh
Q 011954 382 --QLPVLGTA-AGGT---MEIVVNGTTGLLHPTGKEGVTPLANNIVKLAT 425 (474)
Q Consensus 382 --G~PvI~s~-~~g~---~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~ 425 (474)
.+|+|... .... .+.+..|..+++..|-+ .++|.++|..++.
T Consensus 79 ~~~~pii~~s~~~~~~~~~~~~~~g~~~~l~KP~~--~~~L~~~l~~~l~ 126 (129)
T 3h1g_A 79 FKEIPIIMITAEGGKAEVITALKAGVNNYIVKPFT--PQVLKEKLEVVLG 126 (129)
T ss_dssp CTTCCEEEEESCCSHHHHHHHHHHTCCEEEESCCC--HHHHHHHHHHHHC
T ss_pred CCCCeEEEEeCCCChHHHHHHHHcCccEEEeCCCC--HHHHHHHHHHHhc
Confidence 57876643 3322 23345678899999998 9999999998875
|
| >2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=82.48 E-value=1.4 Score=36.99 Aligned_cols=40 Identities=18% Similarity=0.001 Sum_probs=30.9
Q ss_pred ccCEEEEEecCCCCCChhHHHHHHHHHHHhcCcEEEEEeCCC
Q 011954 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWITNQK 114 (474)
Q Consensus 73 ~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 114 (474)
+||||+++... .|.....+..+++.+.+.|++|.++....
T Consensus 3 ~mmkilii~~S--~g~T~~la~~i~~~l~~~g~~v~~~~l~~ 42 (199)
T 2zki_A 3 CKPNILVLFYG--YGSIVELAKEIGKGAEEAGAEVKIRRVRE 42 (199)
T ss_dssp CCCEEEEEECC--SSHHHHHHHHHHHHHHHHSCEEEEEECCC
T ss_pred CCcEEEEEEeC--ccHHHHHHHHHHHHHHhCCCEEEEEehhH
Confidence 36899999876 34345778888999998999999987543
|
| >2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A | Back alignment and structure |
|---|
Probab=82.35 E-value=5.3 Score=30.56 Aligned_cols=107 Identities=9% Similarity=0.089 Sum_probs=63.2
Q ss_pred CcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCCCChHHHHh--cCCEEEEcCCCCCCCCchHHHHHHh--c-
Q 011954 307 PSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYLA--SIDVLVQNSQARGECFGRITIEAMA--F- 381 (474)
Q Consensus 307 ~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~--~adv~v~ps~~~~E~~~~~~~EAma--~- 381 (474)
...+++|+.+.+ .....++...+..|. .|......++....+. ..|++++| +.-|+.+++.+. .
T Consensus 17 ~~~~ilivdd~~----~~~~~l~~~L~~~g~--~v~~~~~~~~al~~l~~~~~dlvi~~-----~~~g~~~~~~l~~~~~ 85 (137)
T 2pln_A 17 GSMRVLLIEKNS----VLGGEIEKGLNVKGF--MADVTESLEDGEYLMDIRNYDLVMVS-----DKNALSFVSRIKEKHS 85 (137)
T ss_dssp TCSEEEEECSCH----HHHHHHHHHHHHTTC--EEEEESCHHHHHHHHHHSCCSEEEEC-----STTHHHHHHHHHHHST
T ss_pred CCCeEEEEeCCH----HHHHHHHHHHHHcCc--EEEEeCCHHHHHHHHHcCCCCEEEEc-----CccHHHHHHHHHhcCC
Confidence 345667776653 345566666666554 4444443333333333 35777733 334556665554 3
Q ss_pred CCCEEEc-CCCC---cceeeeeCCceeeecCC-CCChHHHHHHHHHHhhC
Q 011954 382 QLPVLGT-AAGG---TMEIVVNGTTGLLHPTG-KEGVTPLANNIVKLATH 426 (474)
Q Consensus 382 G~PvI~s-~~~g---~~e~v~~~~~G~l~~~~-d~~~~~la~~i~~ll~~ 426 (474)
.+|+|.- .... ..+.+..|..+++..|- + .++|..+|..++..
T Consensus 86 ~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kP~~~--~~~l~~~i~~~~~~ 133 (137)
T 2pln_A 86 SIVVLVSSDNPTSEEEVHAFEQGADDYIAKPYRS--IKALVARIEARLRF 133 (137)
T ss_dssp TSEEEEEESSCCHHHHHHHHHTTCSEEEESSCSC--HHHHHHHHHHHTC-
T ss_pred CccEEEEeCCCCHHHHHHHHHcCCceeeeCCCCC--HHHHHHHHHHHHhh
Confidence 6777654 3322 23334557789999988 8 99999999988753
|
| >3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=81.31 E-value=4 Score=37.16 Aligned_cols=81 Identities=20% Similarity=0.216 Sum_probs=44.3
Q ss_pred ccccCEEEEEecCCCCCChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchh----hhhhcccchhccceeeeehh-----c
Q 011954 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDE----VIYSLEHKMLDRGVQVLSAK-----G 141 (474)
Q Consensus 71 ~~~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~-----~ 141 (474)
+|++|||+|+.. ..+.....++|.+.||+|..+..+.+..... ....+...-...+++++... .
T Consensus 4 m~~~mrivf~Gt-------~~fa~~~L~~L~~~~~~v~~Vvt~pd~p~grg~~~~~~~v~~~A~~~gIpv~~~~~~~~~~ 76 (318)
T 3q0i_A 4 MSQSLRIVFAGT-------PDFAARHLAALLSSEHEIIAVYTQPERPAGRGKKLTASPVKTLALEHNVPVYQPENFKSDE 76 (318)
T ss_dssp ---CCEEEEECC-------SHHHHHHHHHHHTSSSEEEEEECCCC---------CCCHHHHHHHHTTCCEECCSCSCSHH
T ss_pred cccCCEEEEEec-------CHHHHHHHHHHHHCCCcEEEEEcCCCCcccccccCCCCHHHHHHHHcCCCEEccCcCCCHH
Confidence 355789999875 2455555677878899987555432221110 01112233345566665332 2
Q ss_pred HHHHhhhcCCCEEEEcc
Q 011954 142 EKAINTALNADLVVLNT 158 (474)
Q Consensus 142 ~~~~~~~~~~DiV~~~~ 158 (474)
....+...++|++++-.
T Consensus 77 ~~~~l~~~~~Dliv~~~ 93 (318)
T 3q0i_A 77 SKQQLAALNADLMVVVA 93 (318)
T ss_dssp HHHHHHTTCCSEEEESS
T ss_pred HHHHHHhcCCCEEEEeC
Confidence 33456678999999864
|
| >2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi} | Back alignment and structure |
|---|
Probab=81.15 E-value=12 Score=27.73 Aligned_cols=74 Identities=16% Similarity=0.330 Sum_probs=49.2
Q ss_pred EEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCCCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHh--cCCCEEEc
Q 011954 311 AVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYLASIDVLVQNSQARGECFGRITIEAMA--FQLPVLGT 388 (474)
Q Consensus 311 l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma--~G~PvI~s 388 (474)
++++|.|..+. -..+.+++.+++.|++-.|.-. ...++...+..+|+++.+.. .. +-..-++..+ .++||+.-
T Consensus 8 lvvC~~G~~TS-ll~~kl~~~~~~~gi~~~i~~~-~~~~~~~~~~~~D~Ii~t~~--l~-~~~~~~~~~~~~~~~pv~~I 82 (109)
T 2l2q_A 8 LLVCGAGMSTS-MLVQRIEKYAKSKNINATIEAI-AETRLSEVVDRFDVVLLAPQ--SR-FNKKRLEEITKPKGIPIEII 82 (109)
T ss_dssp EEESSSSCSSC-HHHHHHHHHHHHHTCSEEEEEE-CSTTHHHHTTTCSEEEECSC--CS-SHHHHHHHHHHHHTCCEEEC
T ss_pred EEECCChHhHH-HHHHHHHHHHHHCCCCeEEEEe-cHHHHHhhcCCCCEEEECCc--cH-HHHHHHHHHhcccCCCEEEE
Confidence 66778887666 5778999999999885444333 34577777889999988765 21 1133334433 58898765
Q ss_pred C
Q 011954 389 A 389 (474)
Q Consensus 389 ~ 389 (474)
+
T Consensus 83 ~ 83 (109)
T 2l2q_A 83 N 83 (109)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5} | Back alignment and structure |
|---|
Probab=80.96 E-value=33 Score=31.25 Aligned_cols=42 Identities=12% Similarity=0.006 Sum_probs=27.9
Q ss_pred cccCEEEEEecCCCC-CChhHHHHHHHHHHHhcCcEEEEEeCC
Q 011954 72 MKSKLVLLVSHELSL-SGGPLLLMELAFLLRGVGAEVVWITNQ 113 (474)
Q Consensus 72 ~~~~kIl~v~~~~~~-gG~~~~~~~l~~~L~~~G~~V~v~~~~ 113 (474)
|.+++|.++.+.... .-.......+.+++.+.|+++.++...
T Consensus 1 ~~~~~Ig~i~p~~~~~~f~~~~~~g~~~~a~~~g~~~~~~~~~ 43 (350)
T 3h75_A 1 MSLTSVVFLNPGNSTETFWVSYSQFMQAAARDLGLDLRILYAE 43 (350)
T ss_dssp --CCEEEEEECSCTTCHHHHHHHHHHHHHHHHHTCEEEEEECT
T ss_pred CCCCEEEEECCCCCCChHHHHHHHHHHHHHHHcCCeEEEEECC
Confidence 346789999987533 112355666667778889999988654
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=80.92 E-value=41 Score=32.33 Aligned_cols=128 Identities=9% Similarity=0.093 Sum_probs=71.1
Q ss_pred CcchHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcC---------------chHHHHHHHHHHHcCCCCeEEEecC
Q 011954 282 GKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQ---------------TKFETELRNFVAEKKIQDHVHFVNK 346 (474)
Q Consensus 282 ~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~---------------~~~~~~l~~~~~~~~l~~~v~~~g~ 346 (474)
.+.+..+.+.+... ..+.-+++|+|+|.-.. ....+.++.+++++. +-+.+.|.
T Consensus 218 ~~~i~~~~~~~g~~---------~~~~~~v~I~GgG~ig~~lA~~L~~~~~v~iIE~d~~r~~~la~~l~--~~~Vi~GD 286 (461)
T 4g65_A 218 SNHIRSVMSELQRL---------EKPYRRIMIVGGGNIGASLAKRLEQTYSVKLIERNLQRAEKLSEELE--NTIVFCGD 286 (461)
T ss_dssp TTTHHHHHHHTTGG---------GSCCCEEEEECCSHHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHCT--TSEEEESC
T ss_pred cchHHHHHHhhccc---------cccccEEEEEcchHHHHHHHHHhhhcCceEEEecCHHHHHHHHHHCC--CceEEecc
Confidence 45666665555322 12344678888773100 002344555555553 45667776
Q ss_pred CCChHHH----HhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCC--CcceeeeeCCceeeecCCCCChHHHHHHH
Q 011954 347 TLTVSPY----LASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAG--GTMEIVVNGTTGLLHPTGKEGVTPLANNI 420 (474)
Q Consensus 347 ~~~~~~~----~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~--g~~e~v~~~~~G~l~~~~d~~~~~la~~i 420 (474)
-.+..-+ +..+|+++..+.. .|.-=++.+-|-.+|.+=+.+.+. ...++++...-..++.| ....+..|
T Consensus 287 ~td~~~L~ee~i~~~D~~ia~T~~-De~Ni~~~llAk~~gv~kvIa~vn~~~~~~l~~~~gid~visp----~~~~a~~I 361 (461)
T 4g65_A 287 AADQELLTEENIDQVDVFIALTNE-DETNIMSAMLAKRMGAKKVMVLIQRGAYVDLVQGGVIDVAISP----QQATISAL 361 (461)
T ss_dssp TTCHHHHHHTTGGGCSEEEECCSC-HHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHCSSSSCEEECH----HHHHHHHH
T ss_pred ccchhhHhhcCchhhcEEEEcccC-cHHHHHHHHHHHHcCCccccccccccchhhhhhccccceeeCH----HHHHHHHH
Confidence 5443322 5779999987763 555555677788899887766543 33444533333344443 34566666
Q ss_pred HHHhh
Q 011954 421 VKLAT 425 (474)
Q Consensus 421 ~~ll~ 425 (474)
.+.+.
T Consensus 362 ~~~i~ 366 (461)
T 4g65_A 362 LTHVR 366 (461)
T ss_dssp HHHHH
T ss_pred HHHhh
Confidence 66653
|
| >3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB} | Back alignment and structure |
|---|
Probab=80.85 E-value=12 Score=29.28 Aligned_cols=110 Identities=14% Similarity=0.185 Sum_probs=70.0
Q ss_pred CcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCCCChHHHHh--cCCEEEEcCCCCCCCCchHHHHHHh----
Q 011954 307 PSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYLA--SIDVLVQNSQARGECFGRITIEAMA---- 380 (474)
Q Consensus 307 ~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~--~adv~v~ps~~~~E~~~~~~~EAma---- 380 (474)
...+++|+.+.+ .....+++..++.|. .|......++....+. ..|++++-..- .+.-|+.+++.+.
T Consensus 6 ~~~~ILivdd~~----~~~~~l~~~L~~~g~--~v~~~~~~~~al~~l~~~~~dlii~D~~l-~~~~g~~~~~~lr~~~~ 78 (154)
T 3gt7_A 6 RAGEILIVEDSP----TQAEHLKHILEETGY--QTEHVRNGREAVRFLSLTRPDLIISDVLM-PEMDGYALCRWLKGQPD 78 (154)
T ss_dssp -CCEEEEECSCH----HHHHHHHHHHHTTTC--EEEEESSHHHHHHHHTTCCCSEEEEESCC-SSSCHHHHHHHHHHSTT
T ss_pred CCCcEEEEeCCH----HHHHHHHHHHHHCCC--EEEEeCCHHHHHHHHHhCCCCEEEEeCCC-CCCCHHHHHHHHHhCCC
Confidence 356778887754 356677777777664 4544444344444443 35887775431 4455777777664
Q ss_pred -cCCCEEEcC-CCC---cceeeeeCCceeeecCCCCChHHHHHHHHHHhh
Q 011954 381 -FQLPVLGTA-AGG---TMEIVVNGTTGLLHPTGKEGVTPLANNIVKLAT 425 (474)
Q Consensus 381 -~G~PvI~s~-~~g---~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~ 425 (474)
..+|+|... ... ..+.+..|..+++..|-+ .++|..+|..++.
T Consensus 79 ~~~~pii~~s~~~~~~~~~~~~~~g~~~~l~KP~~--~~~l~~~i~~~l~ 126 (154)
T 3gt7_A 79 LRTIPVILLTILSDPRDVVRSLECGADDFITKPCK--DVVLASHVKRLLS 126 (154)
T ss_dssp TTTSCEEEEECCCSHHHHHHHHHHCCSEEEESSCC--HHHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCChHHHHHHHHCCCCEEEeCCCC--HHHHHHHHHHHHH
Confidence 467887643 222 123345577899999988 9999999998875
|
| >3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=80.54 E-value=10 Score=29.59 Aligned_cols=113 Identities=14% Similarity=0.091 Sum_probs=67.8
Q ss_pred CcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCCCChHHHH--hcCCEEEEcCCCCCCCCchHHHHHHhc---
Q 011954 307 PSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYL--ASIDVLVQNSQARGECFGRITIEAMAF--- 381 (474)
Q Consensus 307 ~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~--~~adv~v~ps~~~~E~~~~~~~EAma~--- 381 (474)
...+++|+.+.+ .....+++...+.+....+......++....+ ...|++++-... .+.-|..+++.+..
T Consensus 14 ~~~~iLivdd~~----~~~~~l~~~L~~~~~~~~v~~~~~~~~a~~~l~~~~~dlii~d~~l-~~~~g~~~~~~l~~~~~ 88 (152)
T 3eul_A 14 EKVRVVVGDDHP----LFREGVVRALSLSGSVNVVGEADDGAAALELIKAHLPDVALLDYRM-PGMDGAQVAAAVRSYEL 88 (152)
T ss_dssp CCEEEEEECSSH----HHHHHHHHHHHHHSSEEEEEEESSHHHHHHHHHHHCCSEEEEETTC-SSSCHHHHHHHHHHTTC
T ss_pred ceEEEEEEcCCH----HHHHHHHHHHhhCCCeEEEEEeCCHHHHHHHHHhcCCCEEEEeCCC-CCCCHHHHHHHHHhcCC
Confidence 456777777653 35566677776665322232333333333333 346887764431 44456666666543
Q ss_pred CCCEEEc-CCCCc---ceeeeeCCceeeecCCCCChHHHHHHHHHHhhC
Q 011954 382 QLPVLGT-AAGGT---MEIVVNGTTGLLHPTGKEGVTPLANNIVKLATH 426 (474)
Q Consensus 382 G~PvI~s-~~~g~---~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~ 426 (474)
.+|||.. ..... .+.+..|..+++..|.+ .++|.++|..++..
T Consensus 89 ~~~ii~~s~~~~~~~~~~~~~~g~~~~l~Kp~~--~~~l~~~i~~~~~~ 135 (152)
T 3eul_A 89 PTRVLLISAHDEPAIVYQALQQGAAGFLLKDST--RTEIVKAVLDCAKG 135 (152)
T ss_dssp SCEEEEEESCCCHHHHHHHHHTTCSEEEETTCC--HHHHHHHHHHHHHC
T ss_pred CCeEEEEEccCCHHHHHHHHHcCCCEEEecCCC--HHHHHHHHHHHHcC
Confidence 5666653 33221 23445678899999988 99999999999874
|
| >2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae} | Back alignment and structure |
|---|
Probab=80.26 E-value=15 Score=27.56 Aligned_cols=108 Identities=11% Similarity=0.103 Sum_probs=64.5
Q ss_pred cEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCCCChHHHHh---cCCEEEEcCCCCCC-CCchHHHHHHh---
Q 011954 308 SMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYLA---SIDVLVQNSQARGE-CFGRITIEAMA--- 380 (474)
Q Consensus 308 ~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~---~adv~v~ps~~~~E-~~~~~~~EAma--- 380 (474)
..+++|+.+.+ .....++......|. .+......++....+. ..|++++-... .+ .-|..+++.+.
T Consensus 5 ~~~ilivdd~~----~~~~~l~~~L~~~g~--~v~~~~~~~~a~~~l~~~~~~dlvi~d~~l-~~~~~g~~~~~~l~~~~ 77 (132)
T 2rdm_A 5 AVTILLADDEA----ILLLDFESTLTDAGF--LVTAVSSGAKAIEMLKSGAAIDGVVTDIRF-CQPPDGWQVARVAREID 77 (132)
T ss_dssp SCEEEEECSSH----HHHHHHHHHHHHTTC--EEEEESSHHHHHHHHHTTCCCCEEEEESCC-SSSSCHHHHHHHHHHHC
T ss_pred CceEEEEcCcH----HHHHHHHHHHHHcCC--EEEEECCHHHHHHHHHcCCCCCEEEEeeeC-CCCCCHHHHHHHHHhcC
Confidence 45777887754 356667777776664 4554444344444443 36887764431 33 45666666554
Q ss_pred cCCCEEEc-CCCCc---ceeeeeCCceeeecCCCCChHHHHHHHHHHhhC
Q 011954 381 FQLPVLGT-AAGGT---MEIVVNGTTGLLHPTGKEGVTPLANNIVKLATH 426 (474)
Q Consensus 381 ~G~PvI~s-~~~g~---~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~ 426 (474)
..+|+|.. ..... .+.+.. .+++..|-+ .++|..+|.+++..
T Consensus 78 ~~~~ii~~s~~~~~~~~~~~~~~--~~~l~kP~~--~~~l~~~i~~~~~~ 123 (132)
T 2rdm_A 78 PNMPIVYISGHAALEWASNGVPD--SIILEKPFT--SAQLITAVSQLLNA 123 (132)
T ss_dssp TTCCEEEEESSCCTTHHHHSCTT--CEEEESSCC--HHHHHHHHHHHHHT
T ss_pred CCCCEEEEeCCccHHHHHhhcCC--cceEeCCCC--HHHHHHHHHHHHhc
Confidence 36787654 32222 122222 368888888 99999999888763
|
| >1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1 | Back alignment and structure |
|---|
Probab=80.14 E-value=6.1 Score=35.11 Aligned_cols=39 Identities=15% Similarity=0.136 Sum_probs=28.8
Q ss_pred CEEEEEecCCCCCChhHHHHHHHHHHHhcCcEEEEEeCCCCCC
Q 011954 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWITNQKPNE 117 (474)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~ 117 (474)
||||+.+.+... ..-+..|+++|++.| +|.|+.+.....
T Consensus 1 M~ILlTNDDGi~---ApGi~aL~~aL~~~g-~V~VVAP~~~qS 39 (280)
T 1l5x_A 1 MKILVTNDDGVH---SPGLRLLYQFALSLG-DVDVVAPESPKS 39 (280)
T ss_dssp CEEEEECSSCTT---CHHHHHHHHHHGGGS-EEEEEEESSCTT
T ss_pred CeEEEEcCCCCC---cHhHHHHHHHHHhCC-CEEEEecCCCCc
Confidence 689888775322 245889999999988 999999765443
|
| >4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A | Back alignment and structure |
|---|
Probab=80.12 E-value=9.7 Score=29.66 Aligned_cols=112 Identities=11% Similarity=0.090 Sum_probs=62.0
Q ss_pred cEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCCCChHHHHh--cCCEEEEcCCCCCCCCchHHHHHHhc---C
Q 011954 308 SMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYLA--SIDVLVQNSQARGECFGRITIEAMAF---Q 382 (474)
Q Consensus 308 ~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~--~adv~v~ps~~~~E~~~~~~~EAma~---G 382 (474)
..+++|+.+.+ .....+.......+....+......++....+. ..|++++-..- .+.-|..+++.+.. .
T Consensus 20 m~~iLivdd~~----~~~~~l~~~L~~~~~~~~v~~~~~~~~al~~l~~~~~dlii~D~~l-~~~~g~~~~~~l~~~~~~ 94 (150)
T 4e7p_A 20 HMKVLVAEDQS----MLRDAMCQLLTLQPDVESVLQAKNGQEAIQLLEKESVDIAILDVEM-PVKTGLEVLEWIRSEKLE 94 (150)
T ss_dssp CEEEEEECSCH----HHHHHHHHHHHTSTTEEEEEEESSHHHHHHHHTTSCCSEEEECSSC-SSSCHHHHHHHHHHTTCS
T ss_pred ccEEEEEcCCH----HHHHHHHHHHHhCCCcEEEEEECCHHHHHHHhhccCCCEEEEeCCC-CCCcHHHHHHHHHHhCCC
Confidence 35566665542 234445555554432122333333333333332 25777764331 34456666666543 5
Q ss_pred CCEEEc-CCCC---cceeeeeCCceeeecCCCCChHHHHHHHHHHhhC
Q 011954 383 LPVLGT-AAGG---TMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATH 426 (474)
Q Consensus 383 ~PvI~s-~~~g---~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~ 426 (474)
+|+|.- .... ..+.+..|..+++..+-+ .++|.++|..++..
T Consensus 95 ~~ii~ls~~~~~~~~~~~~~~g~~~~l~Kp~~--~~~l~~~i~~~~~~ 140 (150)
T 4e7p_A 95 TKVVVVTTFKRAGYFERAVKAGVDAYVLKERS--IADLMQTLHTVLEG 140 (150)
T ss_dssp CEEEEEESCCCHHHHHHHHHTTCSEEEETTSC--HHHHHHHHHHHHTT
T ss_pred CeEEEEeCCCCHHHHHHHHHCCCcEEEecCCC--HHHHHHHHHHHHcC
Confidence 666553 3222 233445677899999988 99999999998863
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 474 | ||||
| d2bisa1 | 437 | c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyro | 1e-11 | |
| d1rzua_ | 477 | c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacte | 4e-11 | |
| d2iw1a1 | 370 | c.87.1.8 (A:2-371) Lipopolysaccharide core biosynt | 2e-09 | |
| d1uqta_ | 456 | c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA | 1e-06 |
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 437 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Score = 64.5 bits (155), Expect = 1e-11
Identities = 48/283 (16%), Positives = 87/283 (30%), Gaps = 16/283 (5%)
Query: 182 WWIHEMRGHYFKLEYVKHLPFVAGAMIDSYTTA-EYWKNRTRERLGIRMPETYVVHLGNS 240
++ HE G + D TT + + V G
Sbjct: 161 FYFHEAGLSELAPYPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNGID 220
Query: 241 KDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIR 300
+ + + +R ++ + G+ + I KG D+ L + I
Sbjct: 221 CSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIE-----IL 275
Query: 301 EKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYLASIDVL 360
K + M +++G + L K+ + V S+D +
Sbjct: 276 SSKKEFQEMRFIIIGKGDPELEGWARSLEEKHGNVKVITEMLSREF---VRELYGSVDFV 332
Query: 361 VQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNI 420
+ S FG + +EAM + +A GG +I+ N TG+L G LAN I
Sbjct: 333 IIPSYFE--PFGLVALEAMCLGAIPIASAVGGLRDIITNE-TGILVKAGD--PGELANAI 387
Query: 421 VK-LATHVERRLTMGKKGYERVKDRFLEHHMSQRIALVLREVL 462
+K L + +R F ++R +
Sbjct: 388 LKALELSRSDLSKFRENCKKRAM-SFSWEKSAERYVKAYTGSI 429
|
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Length = 477 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Score = 62.4 bits (150), Expect = 4e-11
Identities = 32/203 (15%), Positives = 60/203 (29%), Gaps = 21/203 (10%)
Query: 267 RDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFET 326
D LF +I+ ++ KG DL + E + L VV+G+ E
Sbjct: 288 DDGSPLFCVISRLTWQKGIDLMAEAVDEIVSL---------GGRLVVLGAGD---VALEG 335
Query: 327 ELRNFVAEKKIQDHVHFVNKTLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVL 386
L + + V A D +R E G + A+ + +
Sbjct: 336 ALLAAASRHHGRVGVAIGYNEPLSHLMQAGCDA--IIIPSRFEPCGLTQLYALRYGCIPV 393
Query: 387 GTAAGGTMEIVVNGTTGLLHPTGKEG--VTP-----LANNIVKLATHVERRLTMGKKGYE 439
GG + V++ L G +P L I + + +
Sbjct: 394 VARTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKL 453
Query: 440 RVKDRFLEHHMSQRIALVLREVL 462
+K + A + +++
Sbjct: 454 GMKSDVSWEKSAGLYAALYSQLI 476
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} Length = 370 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Score = 56.8 bits (135), Expect = 2e-09
Identities = 48/384 (12%), Positives = 109/384 (28%), Gaps = 24/384 (6%)
Query: 76 LVLLVSHELSLSGGP-LLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEHKMLDRGV 134
+V ++ GG M +A + G V T + + ++ +
Sbjct: 1 IVAFCLYKYFPFGGLQRDFMRIASTVAARGHHVRVYTQSWEGDCPKAFELIQVPVKSHTN 60
Query: 135 QVLSAKGEKAINTALNA---DLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHY 191
+A+ + L D VV + G + ++ + + +++ + Y
Sbjct: 61 HGRNAEYYAWVQNHLKEHPADRVVGFNKMPGLDVYFAADVCYAEKVAQEKGFLYRLTSRY 120
Query: 192 FKLEYVKHLPFVAGAMIDSYTTAEYWKNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSV 251
+ F G + ++ ++ G D +
Sbjct: 121 RHYAAFERATFEQGKSTKLMMLTDKQIADFQKHYQTEPERFQILPPGIYPDRKYSEQIPN 180
Query: 252 ARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHA 311
+R E R+ G+++ L + S KG D + + + +R L
Sbjct: 181 SR----EIYRQKNGIKEQQNLLLQVGSDFGRKGVDRSIEALASLPESLRHNTLLFVVGQD 236
Query: 312 VVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYLASIDVLVQNSQARGECF 371
+ A+ +F + + + L Y + +++ + G
Sbjct: 237 KPRKFEALAEKLGVRSNVHFFSGRNDVSELMAAADLLLHPAYQEAAGIVLLEAITAG--- 293
Query: 372 GRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRL 431
LPVL TA G + + G + L + K T R+
Sbjct: 294 -----------LPVLTTAVCGYAHYIADANCGTVIAEPFS-QEQLNEVLRKALTQSPLRM 341
Query: 432 TMGKKGYERVKDRFLEHHMSQRIA 455
+ + + ++ A
Sbjct: 342 AWAENARHYAD-TQDLYSLPEKAA 364
|
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} Length = 456 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Score = 48.3 bits (114), Expect = 1e-06
Identities = 34/302 (11%), Positives = 89/302 (29%), Gaps = 35/302 (11%)
Query: 181 LWWIHEMRGHYFKLEYV-KHLPFVAGAMIDS---YTTAEYWKNRTRERLGIRMPETYVVH 236
L + + + A +D T ++ G + T V
Sbjct: 166 LPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTAWG-KAFRTEVYP 224
Query: 237 LGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRG---KGQDLFLHSFY 293
+G + L + E V+ I SV R KG ++
Sbjct: 225 IGIEPKEIAKQAAGPLPPKLAQLKAELKNVQ-------NIFSVERLDYSKGLPERFLAYE 277
Query: 294 ESLQLIREKKLQVP-SMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSP 352
L+ + ++ + A D+ A +L N + ++
Sbjct: 278 ALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQ 337
Query: 353 YLASIDVLVQNSQARG-------ECFGRITIEAMAFQLP-----VLGTAAGGTMEIVVNG 400
+ ++ + + + E +A Q P ++ + G + +
Sbjct: 338 HFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELTSA 397
Query: 401 TTGLLHPTGKEGVTPLANNIVKLATH-VERRLTMGKKGYERVKDRFLEHHMSQRIALVLR 459
+++P ++ +A + + T + R++ + + + + +H + L+
Sbjct: 398 L--IVNPYDRDE---VAAALDRALTMSLAERISRHAEMLDVIV-KNDINHWQECFISDLK 451
Query: 460 EV 461
++
Sbjct: 452 QI 453
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 474 | |||
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 100.0 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 100.0 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 100.0 | |
| d2bfwa1 | 196 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.96 | |
| d1uqta_ | 456 | Trehalose-6-phosphate synthase, OtsA {Escherichia | 99.94 | |
| d2f9fa1 | 166 | First mannosyl transferase WbaZ {Archaeoglobus ful | 99.93 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 99.49 | |
| d1rrva_ | 401 | TDP-vancosaminyltransferase GftD {Amycolatopsis or | 99.26 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 99.15 | |
| d1iira_ | 401 | UDP-glucosyltransferase GtfB {Amycolatopsis orient | 99.08 | |
| d1v4va_ | 373 | UDP-N-acetylglucosamine 2-epimerase {Thermus therm | 98.94 | |
| d1o6ca_ | 377 | UDP-N-acetylglucosamine 2-epimerase {Bacillus subt | 98.56 | |
| d1l5wa_ | 796 | Maltodextrin phosphorylase (MALP) {Escherichia col | 98.45 | |
| d2acva1 | 461 | Triterpene UDP-glucosyl transferase UGT71G1 {Medic | 98.37 | |
| d1f6da_ | 376 | UDP-N-acetylglucosamine 2-epimerase {Escherichia c | 98.35 | |
| d2gj4a1 | 824 | Glycogen phosphorylase {Rabbit (Oryctolagus cunicu | 98.35 | |
| d2pq6a1 | 473 | (Iso)flavonoid glycosyltransferase {Medicago trunc | 98.14 | |
| d2c1xa1 | 450 | UDP glucose:flavonoid 3-o-glucosyltransferase {Gra | 98.13 | |
| d2vcha1 | 471 | Hydroquinone glucosyltransferase {Thale cress (Ara | 97.81 | |
| d1ygpa_ | 876 | Glycogen phosphorylase {Baker's yeast (Saccharomyc | 97.77 | |
| d1pswa_ | 348 | ADP-heptose LPS heptosyltransferase II {Escherichi | 97.58 | |
| d1uana_ | 227 | Hypothetical protein TT1542 {Thermus thermophilus | 87.37 | |
| d1i3ca_ | 144 | Response regulator for cyanobacterial phytochrome | 85.88 | |
| d1mvoa_ | 121 | PhoP receiver domain {Bacillus subtilis [TaxId: 14 | 85.42 | |
| d1j6ua1 | 89 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 85.14 | |
| d1a9xa4 | 121 | Carbamoyl phosphate synthetase (CPS), large subuni | 84.86 | |
| d2blna2 | 203 | Polymyxin resistance protein ArnA, N-terminal doma | 84.8 | |
| d2hy5b1 | 132 | Intracellular sulfur oxidation protein DsrF {Chrom | 83.41 | |
| d1a9xa3 | 127 | Carbamoyl phosphate synthetase (CPS), large subuni | 83.02 | |
| d2d1pb1 | 119 | tRNA 2-thiouridine synthesizing protein C, TusC {E | 82.48 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 81.53 | |
| d2hy5a1 | 130 | Sulfurtransferase DsrE {Chromatium vinosum [TaxId: | 81.47 | |
| d1ydwa1 | 184 | Probable oxidoreductase At4g09670 {Thale cress (Ar | 81.45 | |
| d1d4aa_ | 273 | NAD(P)H:quinone reductase {Human (Homo sapiens) [T | 81.05 | |
| d1j9ja_ | 247 | SurE homolog TM1662 {Thermotoga maritima [TaxId: 2 | 80.85 | |
| d1zgza1 | 120 | TorCAD operon transcriptional regulator TorD, N-te | 80.42 | |
| d2d1pa1 | 128 | tRNA 2-thiouridine synthesizing protein D, TusD {E | 80.36 |
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=100.00 E-value=5.3e-44 Score=355.34 Aligned_cols=366 Identities=18% Similarity=0.123 Sum_probs=246.0
Q ss_pred CEEEEEecCCCC----CChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhc---------c-----cchhccceee
Q 011954 75 KLVLLVSHELSL----SGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSL---------E-----HKMLDRGVQV 136 (474)
Q Consensus 75 ~kIl~v~~~~~~----gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~---------~-----~~~~~~~~~~ 136 (474)
||||+|+.++.| ||.+.++..|+++|+++||+|+|+++.++.........+ . ......++.+
T Consensus 1 M~i~~v~~e~~P~~~~GGl~~vv~~La~~L~~~Gh~V~Vi~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 80 (477)
T d1rzua_ 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPAVKAAVTDPVKCFEFTDLLGEKADLLEVQHERLDL 80 (477)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCHHHHHHCCSCEEEEEESCSSSCCEEEEEEEETTEEE
T ss_pred CEEEEEEEeeecccccCcHHHHHHHHHHHHHHcCCeEEEEecCCcchhhhcccceEEEEEeccCCceEEEEEEEECCeeE
Confidence 789999987554 776789999999999999999999864321000000000 0 0000111111
Q ss_pred eeh---------------------h-----------cHHHH----hhhcCCCEEEEcccchhhHHhHHhhhcccccccce
Q 011954 137 LSA---------------------K-----------GEKAI----NTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKV 180 (474)
Q Consensus 137 ~~~---------------------~-----------~~~~~----~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (474)
+.. . ....+ ....+|||||+|+...+......... .....|+
T Consensus 81 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pDIvH~h~~~~~l~~~~~~~~--~~~~ip~ 158 (477)
T d1rzua_ 81 LILDAPAYYERSGGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVLPGWRPDMVHAHDWQAAMTPVYMRYA--ETPEIPS 158 (477)
T ss_dssp EEEECHHHHCSSSCSSBCTTSSBCTTHHHHHHHHHHHHHHHHTTCSSSCCCSEEEEEHHHHTTHHHHHHHS--SSCCCCE
T ss_pred EEecChhhcccCCCcccCcccccccccHHHHHHHHHHHHhhhhhcccCCCCCEEEecchhHHHHHHHHHHh--hCCCCCE
Confidence 100 0 00011 11258999999975544332222222 2234589
Q ss_pred eeeeeccccccc-hhhh-------------------------hhcccccccccccccccHHHHHHh-----HHHHhcCCC
Q 011954 181 LWWIHEMRGHYF-KLEY-------------------------VKHLPFVAGAMIDSYTTAEYWKNR-----TRERLGIRM 229 (474)
Q Consensus 181 v~~~h~~~~~~~-~~~~-------------------------~~~~~~~~~~~~~s~~~~~~~~~~-----~~~~~~~~~ 229 (474)
+.++|+...... .... ...+...+...+.+....+..... .........
T Consensus 159 V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~~~~vs~~~~~~~~~~~~~~~~~~~~~~~~ 238 (477)
T d1rzua_ 159 LLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAEEILTAEFGMGLEGVIGSRA 238 (477)
T ss_dssp EEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHHCSEEEESCHHHHHHTTSHHHHTTCHHHHHTTG
T ss_pred EEEEecccccccCCHHHHHHhhcchhhcccccccccchhHHHHHHHHhhhhhhhccHHHHHHHHHHhcCcchhhhhhhcc
Confidence 999997531110 0000 001122333444443332221110 001122334
Q ss_pred CCeEEEeCCCCccccchhhhhH-----------HHHHhHHHHHHhcCCCCC-CEEEEEecccccCcchHHHHHHHHHHHH
Q 011954 230 PETYVVHLGNSKDLMDIAEDSV-----------ARRVLREHVRESLGVRDD-DLLFAIINSVSRGKGQDLFLHSFYESLQ 297 (474)
Q Consensus 230 ~ki~vi~ngvd~~~~~~~~~~~-----------~~~~~~~~~r~~~~~~~~-~~~i~~vgrl~~~Kg~~~ll~a~~~l~~ 297 (474)
.++.+|+||+|.+.|.|..... ........++...+++++ .++|+++||+.++||++.|++|+.++.+
T Consensus 239 ~~~~vi~ngv~~~~~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vgrl~~~KG~~~Ll~a~~~~~~ 318 (477)
T d1rzua_ 239 HVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVS 318 (477)
T ss_dssp GGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHH
T ss_pred ccEEEEECCcchhhccccccccccccchhhhHHHhhhhHHHHHHhcccccCCccEEEEEeeeeecCCcHHHHHHHHHHHh
Confidence 6899999999999887642211 122334567777777554 5789999999999999999999998866
Q ss_pred HHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCC--CChHHHHhcCCEEEEcCCCCCCCCchHH
Q 011954 298 LIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKT--LTVSPYLASIDVLVQNSQARGECFGRIT 375 (474)
Q Consensus 298 ~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~--~~~~~~~~~adv~v~ps~~~~E~~~~~~ 375 (474)
.+.+|+++|.|+. ....++++....+ .+++.+.+.. +++..+|+.||++|+||. .|+||+++
T Consensus 319 ---------~~~~l~~~G~G~~---~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~aD~~v~PS~--~E~fglv~ 382 (477)
T d1rzua_ 319 ---------LGGRLVVLGAGDV---ALEGALLAAASRH--HGRVGVAIGYNEPLSHLMQAGCDAIIIPSR--FEPCGLTQ 382 (477)
T ss_dssp ---------TTCEEEEEECBCH---HHHHHHHHHHHHT--TTTEEEEESCCHHHHHHHHHHCSEEEECCS--CCSSCSHH
T ss_pred ---------hCCeEEEEecCCc---hHHHHHHHHHhhc--CCeEEEEcccChhHHHHHHHhCccccCCcc--ccCCCHHH
Confidence 5788999998852 1334444444444 4789888864 456678999999999999 79999999
Q ss_pred HHHHhcCCCEEEcCCCCcceeeeeCC---------ceeeecCCCCChHHHHHHHHHHhh---CHHHHHHHHHHHHHHHHH
Q 011954 376 IEAMAFQLPVLGTAAGGTMEIVVNGT---------TGLLHPTGKEGVTPLANNIVKLAT---HVERRLTMGKKGYERVKD 443 (474)
Q Consensus 376 ~EAma~G~PvI~s~~~g~~e~v~~~~---------~G~l~~~~d~~~~~la~~i~~ll~---~~~~~~~~~~~~~~~~~~ 443 (474)
+|||+||+|||+|++||++|+|.|++ +|++++++| +++|+++|.++++ |++.+++|+++|. ++
T Consensus 383 lEAma~G~PvVas~~GG~~E~v~d~~~~~~~~~~~~G~l~~~~d--~~~la~ai~~~l~~~~~~~~~~~~~~~a~---~~ 457 (477)
T d1rzua_ 383 LYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSPVT--LDGLKQAIRRTVRYYHDPKLWTQMQKLGM---KS 457 (477)
T ss_dssp HHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSCS--HHHHHHHHHHHHHHHTCHHHHHHHHHHHH---TC
T ss_pred HHHHHcCCCEEEcCCCCCcceeecCCccccccCCCceEEeCCCC--HHHHHHHHHHHHhhhCCHHHHHHHHHHHH---Hh
Confidence 99999999999999999999998865 899999999 9999999988775 8999999988874 46
Q ss_pred hcCHHHHHHHHHHHHHHHHh
Q 011954 444 RFLEHHMSQRIALVLREVLQ 463 (474)
Q Consensus 444 ~fs~~~~~~~~~~~~~~~~~ 463 (474)
+|||++++++|+++|+++++
T Consensus 458 ~fsw~~~a~~~~~lY~~ll~ 477 (477)
T d1rzua_ 458 DVSWEKSAGLYAALYSQLIS 477 (477)
T ss_dssp CCBHHHHHHHHHHHHHHHTC
T ss_pred hCCHHHHHHHHHHHHHHHhC
Confidence 79999999999999999873
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=100.00 E-value=1.3e-42 Score=341.65 Aligned_cols=371 Identities=18% Similarity=0.144 Sum_probs=257.4
Q ss_pred CEEEEEecCCCC---CChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhccc----------chhccceeeeehh-
Q 011954 75 KLVLLVSHELSL---SGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEH----------KMLDRGVQVLSAK- 140 (474)
Q Consensus 75 ~kIl~v~~~~~~---gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~- 140 (474)
||||+++..++| ||.++++..|+++|+++||+|+|+|+..+....+....+.. .....++.++...
T Consensus 1 MkIl~~~~~~pP~~~GG~~~~~~~La~~L~~~Gh~V~Vvtp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (437)
T d2bisa1 1 MKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRIGG 80 (437)
T ss_dssp CEEEEECSCCTTCCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTSSCCEEEEEEECSSSEEEEEEEEEEETTEEEEEEES
T ss_pred CEEEEECCccCCcccCCHHHHHHHHHHHHHHcCCEEEEEecCCCccchhhccceeecccccceeeeeeccCCeEEEecCc
Confidence 899999988766 88899999999999999999999996543322111110000 0001111111100
Q ss_pred -----------c------------------HHHHh-hhcCCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccc
Q 011954 141 -----------G------------------EKAIN-TALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGH 190 (474)
Q Consensus 141 -----------~------------------~~~~~-~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~ 190 (474)
. ...+. ....||+||+|+...+.. ...+... ...|+++++|+....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pDiIh~~~~~~~~~-~~~~~~~---~~~~~v~~~h~~~~~ 156 (437)
T d2bisa1 81 GLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTVFA-GALIKKY---FKIPAVFTIHRLNKS 156 (437)
T ss_dssp SGGGCSCTTCSHHHHHHHHHHHHHHHHHHHHHHHTTSSCCCSEEEEETGGGHHH-HHHHHHH---HCCCEEEEESSCCCC
T ss_pred cccccccccccchhhHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECChhhhhH-hhhhhcc---ccCceeEEEeecccc
Confidence 0 00111 124689999998655443 2222221 235889999986543
Q ss_pred cchhhhhh--cccc------------cccccccccccHHHHHHhHHHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHh
Q 011954 191 YFKLEYVK--HLPF------------VAGAMIDSYTTAEYWKNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVL 256 (474)
Q Consensus 191 ~~~~~~~~--~~~~------------~~~~~~~s~~~~~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~ 256 (474)
.+...... .+.. ......................++....++.+|+||+|.+.+.+..........
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~~~~~~ki~vi~~g~d~~~~~~~~~~~~~~~~ 236 (437)
T d2bisa1 157 KLPAFYFHEAGLSELAPYPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNGIDCSFWNESYLTGSRDER 236 (437)
T ss_dssp CEEHHHHHHTTCGGGCCSSEECHHHHHHHHSSEEEESCHHHHHHTHHHHGGGTTTEEECCCCCCTTTSCGGGCCSCHHHH
T ss_pred ccchhhhhhccchhhhhHHHHHHHHHHHHhhhhhcccchhhhhhhhhhhccccCceEEEecccccccccccccchhhHHH
Confidence 22211100 0000 000011111222223333344566677899999999999998876544444444
Q ss_pred HHHHHHhcCCCCCCEEEEEeccccc-CcchHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHc
Q 011954 257 REHVRESLGVRDDDLLFAIINSVSR-GKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEK 335 (474)
Q Consensus 257 ~~~~r~~~~~~~~~~~i~~vgrl~~-~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~ 335 (474)
+..++++++.. ++++++++||+.. .||++.+++|+..+.... +.++++|+|+|.|++ .....++.+.+..
T Consensus 237 ~~~~~~~~~~~-~~~~i~~~G~~~~~~Kg~~~ll~a~~~~~~~~-----~~~~~~lvi~G~~~~---~~~~~~~~~~~~~ 307 (437)
T d2bisa1 237 KKSLLSKFGMD-EGVTFMFIGRFDRGQKGVDVLLKAIEILSSKK-----EFQEMRFIIIGKGDP---ELEGWARSLEEKH 307 (437)
T ss_dssp HHHHHHHTTCC-SCEEEEEESCBCSSSSCHHHHHHHHHHHTTSG-----GGGGEEEEEECCBCH---HHHHHHHHHHHTC
T ss_pred HHhhhhhhhcc-CCceEEEeecccccchhHHHHHhhhccccccc-----ccccceeeeeccccc---ccccchhhhcccc
Confidence 67788889884 4578899999975 799999999998874321 237899999999852 1233334443333
Q ss_pred CCCCeEEEecCC--CChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCcceeeeeCCceeeecCCCCCh
Q 011954 336 KIQDHVHFVNKT--LTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGV 413 (474)
Q Consensus 336 ~l~~~v~~~g~~--~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~~e~v~~~~~G~l~~~~d~~~ 413 (474)
.+.+.+.|.. +++..+|+.||++++||. .|++|++++|||+||+|||+|+.||..|++.+ ++|++++++| +
T Consensus 308 --~~~~~~~~~~~~~~~~~~~~~adi~v~~s~--~e~~~~~~~Eama~G~Pvi~~~~g~~~e~i~~-~~G~~~~~~d--~ 380 (437)
T d2bisa1 308 --GNVKVITEMLSREFVRELYGSVDFVIIPSY--FEPFGLVALEAMCLGAIPIASAVGGLRDIITN-ETGILVKAGD--P 380 (437)
T ss_dssp --TTEEEECSCCCHHHHHHHHTTCSEEEECCS--CCSSCHHHHHHHTTTCEEEEESCTTHHHHCCT-TTCEEECTTC--H
T ss_pred --ccceeccccCcHHHHHHHHhhhcccccccc--ccccchHHHHHHHCCCCEEEeCCCCcHHhEEC-CcEEEECCCC--H
Confidence 3567777754 679999999999999998 89999999999999999999999999999865 5899999999 9
Q ss_pred HHHHHHHHHHhh-CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhhh
Q 011954 414 TPLANNIVKLAT-HVERRLTMGKKGYERVKDRFLEHHMSQRIALVLREVLQYAK 466 (474)
Q Consensus 414 ~~la~~i~~ll~-~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~~~~ 466 (474)
++|+++|.++++ |++.+++|++++++.++ +|||++++++|+++|++++++..
T Consensus 381 ~~la~~i~~ll~~~~~~~~~~~~~~~~~~~-~~s~~~~a~~~~~iY~~~i~r~~ 433 (437)
T d2bisa1 381 GELANAILKALELSRSDLSKFRENCKKRAM-SFSWEKSAERYVKAYTGSIDRAF 433 (437)
T ss_dssp HHHHHHHHHHHTTTTSCTHHHHHHHHHHHH-HSCHHHHHHHHHHHHHTCSCCBC
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHHHhHh
Confidence 999999999987 78899999999999875 59999999999999999987653
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.2e-43 Score=340.48 Aligned_cols=351 Identities=16% Similarity=0.097 Sum_probs=246.2
Q ss_pred EEEEec-CCCCCChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhcccchhccceee--e--------ehhcHHHH
Q 011954 77 VLLVSH-ELSLSGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEHKMLDRGVQV--L--------SAKGEKAI 145 (474)
Q Consensus 77 Il~v~~-~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--------~~~~~~~~ 145 (474)
|+|+.. +++.||+++++.+|+++|.++||+|+|+|......... .+....+.. . ........
T Consensus 2 i~f~~~~y~p~GG~e~~~~~la~~L~~~G~~V~v~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (370)
T d2iw1a1 2 VAFCLYKYFPFGGLQRDFMRIASTVAARGHHVRVYTQSWEGDCPK-------AFELIQVPVKSHTNHGRNAEYYAWVQNH 74 (370)
T ss_dssp EEEECSEECTTCHHHHHHHHHHHHHHHTTCCEEEEESEECSCCCT-------TCEEEECCCCCSSHHHHHHHHHHHHHHH
T ss_pred EEEEecCCCCCCCHHHHHHHHHHHHHHCCCEEEEEecCCCCCCCC-------ceEEEEcCccccccchhhHHHHHHHHHH
Confidence 677775 45669999999999999999999999998542221110 000000000 0 01122334
Q ss_pred hhhcCCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccc----cccchhhhhhcccccccccccccccHHHHHHhH
Q 011954 146 NTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMR----GHYFKLEYVKHLPFVAGAMIDSYTTAEYWKNRT 221 (474)
Q Consensus 146 ~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~----~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 221 (474)
....++|+||.+...++....... .. .....+...+... ..+.......................+.....+
T Consensus 75 ~~~~~~d~v~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (370)
T d2iw1a1 75 LKEHPADRVVGFNKMPGLDVYFAA--DV--CYAEKVAQEKGFLYRLTSRYRHYAAFERATFEQGKSTKLMMLTDKQIADF 150 (370)
T ss_dssp HHHSCCSEEEESSCCTTCSEEECC--SC--CHHHHHHHHCCHHHHTSHHHHHHHHHHHHHHSTTCCCEEEESCHHHHHHH
T ss_pred HHhcccceeeecccCchHHHHHHh--hc--ccceeeeeecCccccccchhchhHHHHHHHHhhccCceEEEecHHHHHHH
Confidence 556899999988654322100000 00 0000000000000 000000000000000111122233344445556
Q ss_pred HHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHHHHHHHHHHHHHHHH
Q 011954 222 RERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIRE 301 (474)
Q Consensus 222 ~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~ 301 (474)
...++.+..++.+++||+|.+.+.+...+. .++.+|..++++++.++++++||+.++||++.+++|++++.+..
T Consensus 151 ~~~~~~~~~~i~vi~~gv~~~~~~~~~~~~----~~~~~r~~~~~~~~~~~i~~~gr~~~~Kg~~~li~a~~~l~~~~-- 224 (370)
T d2iw1a1 151 QKHYQTEPERFQILPPGIYPDRKYSEQIPN----SREIYRQKNGIKEQQNLLLQVGSDFGRKGVDRSIEALASLPESL-- 224 (370)
T ss_dssp HHHHCCCGGGEEECCCCCCGGGSGGGSCTT----HHHHHHHHTTCCTTCEEEEEECSCTTTTTHHHHHHHHHTSCHHH--
T ss_pred HHhcCCCcceEEEEEeecccccccccCchh----hhhhhhhccCCCccceEEEEEeccccccchhhhccccccccccc--
Confidence 667888889999999999998765543321 25678899999999999999999999999999999999886643
Q ss_pred hccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCCCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhc
Q 011954 302 KKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYLASIDVLVQNSQARGECFGRITIEAMAF 381 (474)
Q Consensus 302 ~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~ 381 (474)
++..++++|+++ ....+++++++++..++++|+|+++++.++|+.||++|+||. .|+||++++|||+|
T Consensus 225 -----~~~~~~ii~g~~-----~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~adv~v~ps~--~E~~~~~~~EAma~ 292 (370)
T d2iw1a1 225 -----RHNTLLFVVGQD-----KPRKFEALAEKLGVRSNVHFFSGRNDVSELMAAADLLLHPAY--QEAAGIVLLEAITA 292 (370)
T ss_dssp -----HHTEEEEEESSS-----CCHHHHHHHHHHTCGGGEEEESCCSCHHHHHHHCSEEEECCS--CCSSCHHHHHHHHH
T ss_pred -----ccceeeeccccc-----cccccccccccccccccccccccccccccccccccccccccc--cccccceeeecccC
Confidence 455666666553 456788999999999999999999999999999999999998 89999999999999
Q ss_pred CCCEEEcCCCCcceeeeeCCceeee-cCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 011954 382 QLPVLGTAAGGTMEIVVNGTTGLLH-PTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRFLEHHMSQRIALVLR 459 (474)
Q Consensus 382 G~PvI~s~~~g~~e~v~~~~~G~l~-~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~ 459 (474)
|+|||+|+.||.+|++.++.+|+++ +++| +++|+++|.++++|++++++|+++|++++++ |++..+.+++.++|+
T Consensus 293 G~PvI~s~~~g~~e~i~~~~~G~l~~~~~d--~~~la~~i~~ll~d~~~~~~~~~~ar~~~~~-~~~~~~~~~~~~ii~ 368 (370)
T d2iw1a1 293 GLPVLTTAVCGYAHYIADANCGTVIAEPFS--QEQLNEVLRKALTQSPLRMAWAENARHYADT-QDLYSLPEKAADIIT 368 (370)
T ss_dssp TCCEEEETTSTTTHHHHHHTCEEEECSSCC--HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH-SCCSCHHHHHHHHHH
T ss_pred CeeEEEeCCCChHHHhcCCCceEEEcCCCC--HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH-hChhHHHHHHHHHHh
Confidence 9999999999999999999999765 6677 9999999999999999999999999999865 777777777777764
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.96 E-value=1.1e-29 Score=220.27 Aligned_cols=192 Identities=20% Similarity=0.256 Sum_probs=158.5
Q ss_pred CCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccc-cCcchHHHHHHHHHHHHHHHHhccCCCcEEEEEEcC
Q 011954 238 GNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVS-RGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGS 316 (474)
Q Consensus 238 gvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~-~~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~ 316 (474)
|||.+.|.+......+...+..++++++++ ++.+|+|+||+. ++||++.+++|++.+.+.. .+++++|+|+|.
T Consensus 1 gid~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~il~~Grl~~~~Kg~~~li~a~~~l~~~~-----~~~~~~l~i~G~ 74 (196)
T d2bfwa1 1 GIDCSFWNESYLTGSRDERKKSLLSKFGMD-EGVTFMFIGRFDRGQKGVDVLLKAIEILSSKK-----EFQEMRFIIIGK 74 (196)
T ss_dssp CCCTTTSSGGGSCSCHHHHHHHHHHHTTCC-SCEEEEEESCBCSSSSCHHHHHHHHHHHTTSG-----GGGGEEEEEECC
T ss_pred CcChhhcCCCCCCchhHHHHHHHHHHhCCC-CCCEEEEEcCCCccccCHHHHHHHHHhhhccc-----CCCCeEEEEEee
Confidence 799999987754444445578899999995 666788999997 5899999999999885421 247899999998
Q ss_pred CCCcCchHHHHHHHHHHHcCCCCeEEEecCC--CChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCcc
Q 011954 317 DMNAQTKFETELRNFVAEKKIQDHVHFVNKT--LTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTM 394 (474)
Q Consensus 317 g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~--~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~~ 394 (474)
|.+ ++...++.+.+.+ .+.+.+.|.. +++..+|+.||++|+||. .|++|.+++|||+||+|||+++.|++.
T Consensus 75 g~~---~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~di~v~ps~--~e~~~~~~~Eam~~G~pvI~~~~~~~~ 147 (196)
T d2bfwa1 75 GDP---ELEGWARSLEEKH--GNVKVITEMLSREFVRELYGSVDFVIIPSY--FEPFGLVALEAMCLGAIPIASAVGGLR 147 (196)
T ss_dssp BCH---HHHHHHHHHHHHC--TTEEEECSCCCHHHHHHHHTTCSEEEECCS--CCSSCHHHHHHHHTTCEEEEESCHHHH
T ss_pred ccc---chhhhhhhhhhcc--ceeEEeeeccccccchhccccccccccccc--cccccccchhhhhcCceeeecCCCccc
Confidence 752 2334444554444 3466677764 689999999999999998 899999999999999999999999999
Q ss_pred eeeeeCCceeeecCCCCChHHHHHHHHHHhh-CHHHHHHHHHHHHHHHHHhcC
Q 011954 395 EIVVNGTTGLLHPTGKEGVTPLANNIVKLAT-HVERRLTMGKKGYERVKDRFL 446 (474)
Q Consensus 395 e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~-~~~~~~~~~~~~~~~~~~~fs 446 (474)
|++. +.+|++++++| +++++++|.++++ +++.+++|+++|++++.+ ||
T Consensus 148 e~i~-~~~g~~~~~~~--~~~l~~~i~~~l~~~~~~~~~~~~~a~~~a~~-fs 196 (196)
T d2bfwa1 148 DIIT-NETGILVKAGD--PGELANAILKALELSRSDLSKFRENCKKRAMS-FS 196 (196)
T ss_dssp HHCC-TTTCEEECTTC--HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH-TC
T ss_pred eeec-CCceeeECCCC--HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh-CC
Confidence 9885 46999999999 9999999999888 899999999999999866 76
|
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Probab=99.94 E-value=5e-26 Score=221.45 Aligned_cols=295 Identities=9% Similarity=0.023 Sum_probs=205.6
Q ss_pred cCCCEEEEcccchhhHHhHHhhhcccccccceeeeeeccccccch-------hhhhhcccccccccccccccHHHHHHhH
Q 011954 149 LNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEMRGHYFK-------LEYVKHLPFVAGAMIDSYTTAEYWKNRT 221 (474)
Q Consensus 149 ~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~-------~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 221 (474)
..-|+|++|+...... ...++...+. .++.+++|........ ......+-.++.+........+.+....
T Consensus 121 ~~~d~iwvhDyhl~ll-p~~lR~~~~~--~~i~~flH~pfP~~~~fr~lp~~~~il~~ll~~d~igf~~~~~~~~fl~~~ 197 (456)
T d1uqta_ 121 QDDDIIWIHDYHLLPF-AHELRKRGVN--NRIGFFLHIPFPTPEIFNALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCL 197 (456)
T ss_dssp CTTCEEEEESGGGTTH-HHHHHHTTCC--SCEEEECCSCCCCHHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHH
T ss_pred cCCCeEEEeccchhhh-HHHHHHhCCC--CcEEEEeCCCCCChHHhccCcchHHHHHHhhccccccccCHHHHHHHHHHH
Confidence 4459999998654443 3444444433 4777888865322111 1112222222333222222222222222
Q ss_pred HHHhcC------------CCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHHHH
Q 011954 222 RERLGI------------RMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFL 289 (474)
Q Consensus 222 ~~~~~~------------~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~ll 289 (474)
...++. ...++.++|+|||.+.|......... ....+++..+ .++.+|+++||+++.||++.++
T Consensus 198 ~~ll~~~~~~~~~i~~~gr~v~v~~~p~GID~~~~~~~~~~~~~-~~~~~l~~~~---~~~~~il~V~Rld~~KGi~~~l 273 (456)
T d1uqta_ 198 SNLTRVTTRSAKSHTAWGKAFRTEVYPIGIEPKEIAKQAAGPLP-PKLAQLKAEL---KNVQNIFSVERLDYSKGLPERF 273 (456)
T ss_dssp HHHSCEEEETTTEEEETTEEEEEEECCCCCCHHHHHHHHHSCCC-HHHHHHHHHT---TTCEEEEEECCBCGGGCHHHHH
T ss_pred HHHhCcccccCCeEEecCceeeeeeecCcccchhhhhhcccHHH-HHHHHHHHhc---CCCeEEEEeCCCchhhchHHHH
Confidence 222221 12368899999999988664332211 1134555555 4778999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchH----HHHHHHHHHH-------cCCCCeEEEecCC--CChHHHHhc
Q 011954 290 HSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKF----ETELRNFVAE-------KKIQDHVHFVNKT--LTVSPYLAS 356 (474)
Q Consensus 290 ~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~----~~~l~~~~~~-------~~l~~~v~~~g~~--~~~~~~~~~ 356 (474)
+|+.++++...+. ..++.|+.+|.++..+... ..++.+++.+ .+..+.+.+.+.. +++..+|+.
T Consensus 274 ~A~~~~l~~~p~~---~~~v~lv~~~~~~~~~~~~~~~~~~ev~~lv~~in~~~~~~~~~~~v~~~~~~~~~~l~a~~~~ 350 (456)
T d1uqta_ 274 LAYEALLEKYPQH---HGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRY 350 (456)
T ss_dssp HHHHHHHHHCGGG---TTTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHH
T ss_pred HHHHHHHHhCccc---cccEEEEEEcCCcccchHHHHHHHHHHHHHHHHHHhhhccCCCCceeeccCCcCHHHHhHHHhh
Confidence 9999998754331 1357888888776544332 2333334333 3566778888853 789999999
Q ss_pred CCEEEEcCCCCCCCCchHHHHHHhcCCC-----EEEcCCCCcceeeeeCCceeeecCCCCChHHHHHHHHHHhh-CHHHH
Q 011954 357 IDVLVQNSQARGECFGRITIEAMAFQLP-----VLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLAT-HVERR 430 (474)
Q Consensus 357 adv~v~ps~~~~E~~~~~~~EAma~G~P-----vI~s~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~-~~~~~ 430 (474)
||++++||. .||||++++|||+||+| +|+|+.+|+.+.+. .|++++|.| ++++|++|.++++ +++.+
T Consensus 351 Adv~v~~s~--~EG~~lv~~Ea~a~~~p~~~g~lIlS~~~G~~~~l~---~g~lVnP~d--~~~~A~ai~~aL~~~~~er 423 (456)
T d1uqta_ 351 SDVGLVTPL--RDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELT---SALIVNPYD--RDEVAAALDRALTMSLAER 423 (456)
T ss_dssp CSEEEECCS--SBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTCT---TSEEECTTC--HHHHHHHHHHHHTCCHHHH
T ss_pred hceeecCCc--cCCCCcHHHHHHHhCCCCCCCcEEEeCCCCCHHHhC---CeEEECcCC--HHHHHHHHHHHHcCCHHHH
Confidence 999999999 89999999999999999 89999999999883 489999999 9999999999998 77889
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Q 011954 431 LTMGKKGYERVKDRFLEHHMSQRIALVLREV 461 (474)
Q Consensus 431 ~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~ 461 (474)
+++.+++++++.+ |+++..++.+++-++++
T Consensus 424 ~~~~~~~~~~v~~-~~~~~W~~~fl~~l~~~ 453 (456)
T d1uqta_ 424 ISRHAEMLDVIVK-NDINHWQECFISDLKQI 453 (456)
T ss_dssp HHHHHHHHHHHHH-TCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHH-CCHHHHHHHHHHHHHhh
Confidence 9999999999976 99999999988887764
|
| >d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: First mannosyl transferase WbaZ species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.93 E-value=6.8e-26 Score=190.37 Aligned_cols=140 Identities=23% Similarity=0.313 Sum_probs=120.1
Q ss_pred CCEEEEEecccccCcchHHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCC-
Q 011954 269 DDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKT- 347 (474)
Q Consensus 269 ~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~- 347 (474)
+.+ ++|+||+.++||++.+++|++++ ++.+++|+|.++... ..+.+.+.+.+.. .++|+|+|++
T Consensus 12 ~~~-~l~iGrl~~~K~~~~~i~a~~~l-----------~~~~l~ivg~~~~~~--~~~~~~~~~~~~~-~~~v~~~g~~~ 76 (166)
T d2f9fa1 12 GDF-WLSVNRIYPEKRIELQLEVFKKL-----------QDEKLYIVGWFSKGD--HAERYARKIMKIA-PDNVKFLGSVS 76 (166)
T ss_dssp CSC-EEEECCSSGGGTHHHHHHHHHHC-----------TTSCEEEEBCCCTTS--THHHHHHHHHHHS-CTTEEEEESCC
T ss_pred CCE-EEEEecCccccCHHHHHHHHHHh-----------cCCeEEEEEeccccc--chhhhhhhhcccc-cCcEEEeeccc
Confidence 344 66999999999999999999876 678999999876432 3444555555543 3689999986
Q ss_pred -CChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCcceeeeeCCceeeecCCCCChHHHHHHHHHHhhC
Q 011954 348 -LTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATH 426 (474)
Q Consensus 348 -~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~ 426 (474)
+++.++|+.||++|+||. .|++|++++|||++|+|||+++.++..|++.++.+|+++++ | +++++++|.+++++
T Consensus 77 ~~~~~~~~~~ad~~i~ps~--~e~~~~~~~Ea~~~g~pvi~s~~~~~~e~i~~~~~g~~~~~-d--~~~~~~~i~~l~~~ 151 (166)
T d2f9fa1 77 EEELIDLYSRCKGLLCTAK--DEDFGLTPIEAMASGKPVIAVNEGGFKETVINEKTGYLVNA-D--VNEIIDAMKKVSKN 151 (166)
T ss_dssp HHHHHHHHHHCSEEEECCS--SCCSCHHHHHHHHTTCCEEEESSHHHHHHCCBTTTEEEECS-C--HHHHHHHHHHHHHC
T ss_pred ccccccccccccccccccc--cccccccccccccccccceeecCCcceeeecCCcccccCCC-C--HHHHHHHHHHHHhC
Confidence 679999999999999999 89999999999999999999999999999999999998765 6 99999999999998
Q ss_pred HH
Q 011954 427 VE 428 (474)
Q Consensus 427 ~~ 428 (474)
++
T Consensus 152 ~~ 153 (166)
T d2f9fa1 152 PD 153 (166)
T ss_dssp TT
T ss_pred HH
Confidence 75
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=99.49 E-value=2.6e-12 Score=120.12 Aligned_cols=111 Identities=16% Similarity=0.064 Sum_probs=79.6
Q ss_pred CCeEEEecCCCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCc-------ceeeeeCCceeeecCCC
Q 011954 338 QDHVHFVNKTLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGT-------MEIVVNGTTGLLHPTGK 410 (474)
Q Consensus 338 ~~~v~~~g~~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~-------~e~v~~~~~G~l~~~~d 410 (474)
..++...++.+++.++|+.||++| .-+.+.++.||+++|+|+|....+.. .+.+++...|+.++..+
T Consensus 230 ~~~~~v~~f~~~~~~lm~~adl~I------t~~G~~T~~Eal~~g~P~I~iP~~~~~~~Q~~NA~~l~~~G~~~~~~~~~ 303 (351)
T d1f0ka_ 230 QPQHKVTEFIDDMAAAYAWADVVV------CRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQ 303 (351)
T ss_dssp CTTSEEESCCSCHHHHHHHCSEEE------ECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTTSEEECCGGG
T ss_pred cccceeeeehhhHHHHHHhCchhh------ccccchHHHHHHHhCCceeeeecccCCchHHHHHHHHHHCCCEEEechhh
Confidence 357888899999999999999999 44567899999999999998754321 23455556888887554
Q ss_pred CChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 011954 411 EGVTPLANNIVKLATHVERRLTMGKKGYERVKDRFLEHHMSQRIALV 457 (474)
Q Consensus 411 ~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~ 457 (474)
.+.+.+.++|..+ +++.+.+|++++++.... -.++++++.++++
T Consensus 304 ~~~e~l~~~l~~l--~~~~~~~~~~~~~~~~~~-~~a~~i~~~i~~l 347 (351)
T d1f0ka_ 304 LSVDAVANTLAGW--SRETLLTMAERARAASIP-DATERVANEVSRV 347 (351)
T ss_dssp CCHHHHHHHHHTC--CHHHHHHHHHHHHHTCCT-THHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhh--CHHHHHHHHHHHHccCCc-cHHHHHHHHHHHH
Confidence 3467888887765 677888999888864322 3345555555444
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Probab=99.26 E-value=3.9e-11 Score=113.95 Aligned_cols=89 Identities=11% Similarity=0.094 Sum_probs=70.3
Q ss_pred CCCCeEEEecCCCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCC----cceeeeeCCceeeecCCCC
Q 011954 336 KIQDHVHFVNKTLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGG----TMEIVVNGTTGLLHPTGKE 411 (474)
Q Consensus 336 ~l~~~v~~~g~~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g----~~e~v~~~~~G~l~~~~d~ 411 (474)
.+++++++.++. ...+++..+|++| ..|...++.||+++|+|+|+....+ ..+.+++...|+..+..+-
T Consensus 283 ~~~~~v~~~~~~-p~~~ll~~~~~~I------~hgG~~t~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~G~g~~l~~~~~ 355 (401)
T d1rrva_ 283 DDRDDCFAIDEV-NFQALFRRVAAVI------HHGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTP 355 (401)
T ss_dssp CCCTTEEEESSC-CHHHHGGGSSEEE------ECCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEECSSSCC
T ss_pred cCCCCEEEEecc-CcHHHhhhccEEE------ecCCchHHHHHHHhCCCEEEecccccHHHHHHHHHHCCCEEEcCcCCC
Confidence 346789999997 4788899999999 5667789999999999999987665 3444555668998887665
Q ss_pred ChHHHHHHHHHHhhCHHHHHH
Q 011954 412 GVTPLANNIVKLATHVERRLT 432 (474)
Q Consensus 412 ~~~~la~~i~~ll~~~~~~~~ 432 (474)
+++.|+++|.++++ ++.+++
T Consensus 356 ~~~~L~~ai~~vl~-~~~r~~ 375 (401)
T d1rrva_ 356 TFESLSAALTTVLA-PETRAR 375 (401)
T ss_dssp CHHHHHHHHHHHTS-HHHHHH
T ss_pred CHHHHHHHHHHHhC-HHHHHH
Confidence 58999999999994 554433
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=99.15 E-value=9.7e-11 Score=110.75 Aligned_cols=83 Identities=10% Similarity=0.068 Sum_probs=66.1
Q ss_pred CCCeEEEecCCCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCc--------ceeeeeCCceeeecC
Q 011954 337 IQDHVHFVNKTLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGT--------MEIVVNGTTGLLHPT 408 (474)
Q Consensus 337 l~~~v~~~g~~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~--------~e~v~~~~~G~l~~~ 408 (474)
..+++.+.++. +...++..+|++|..+ ...++.|||++|+|+|+....+- .+.+.+...|+.++.
T Consensus 268 ~~~~v~i~~~~-p~~~ll~~a~~~v~hg------G~~t~~Eal~~G~P~v~~P~~~d~~~eQ~~nA~~l~~~G~g~~l~~ 340 (391)
T d1pn3a_ 268 DGADCFVVGEV-NLQELFGRVAAAIHHD------SAGTTLLAMRAGIPQIVVRRVVDNVVEQAYHADRVAELGVGVAVDG 340 (391)
T ss_dssp CCTTCCEESSC-CHHHHHTTSSCEEEES------CHHHHHHHHHHTCCEEEECSSCCBTTBCCHHHHHHHHHTSEEEECC
T ss_pred CCCCEEEeccc-CHHHHHhhccEEEecC------chHHHHHHHHhCCcEEEeccccCCcchHHHHHHHHHHCCCEEEcCc
Confidence 45789999998 5788999999999654 35689999999999999876542 334555668988877
Q ss_pred CCCChHHHHHHHHHHhhC
Q 011954 409 GKEGVTPLANNIVKLATH 426 (474)
Q Consensus 409 ~d~~~~~la~~i~~ll~~ 426 (474)
.+-++++|+++|.+++++
T Consensus 341 ~~~~~~~l~~~i~~~l~~ 358 (391)
T d1pn3a_ 341 PVPTIDSLSAALDTALAP 358 (391)
T ss_dssp SSCCHHHHHHHHHHHTST
T ss_pred CCCCHHHHHHHHHHHhCH
Confidence 664589999999999964
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=99.08 E-value=5.4e-09 Score=98.56 Aligned_cols=83 Identities=10% Similarity=-0.010 Sum_probs=66.5
Q ss_pred CCCeEEEecCCCChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCC----cceeeeeCCceeeecCCCCC
Q 011954 337 IQDHVHFVNKTLTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGG----TMEIVVNGTTGLLHPTGKEG 412 (474)
Q Consensus 337 l~~~v~~~g~~~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g----~~e~v~~~~~G~l~~~~d~~ 412 (474)
.++|+++.++. ...++|..+|++| ..|...++.||+++|+|+|+....+ ..+.+++...|..++..+-+
T Consensus 283 ~~~nv~~~~~~-p~~~~l~~~~~~V------~hgG~~t~~Eal~~GvP~v~~P~~~DQ~~na~~l~~~G~g~~l~~~~~~ 355 (401)
T d1iira_ 283 DGADCFAIGEV-NHQVLFGRVAAVI------HHGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHDGPIPT 355 (401)
T ss_dssp CGGGEEECSSC-CHHHHGGGSSEEE------ECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCC
T ss_pred CCCCEEEEecc-CHHHHHhhcCEEE------ecCCchHHHHHHHhCCCEEEccccccHHHHHHHHHHCCCEEEcCcCCCC
Confidence 45789999998 4678999999999 5677889999999999999976544 33345555688888776545
Q ss_pred hHHHHHHHHHHhhC
Q 011954 413 VTPLANNIVKLATH 426 (474)
Q Consensus 413 ~~~la~~i~~ll~~ 426 (474)
+++|+++|.+++++
T Consensus 356 ~~~l~~ai~~~l~~ 369 (401)
T d1iira_ 356 FDSLSAALATALTP 369 (401)
T ss_dssp HHHHHHHHHHHTSH
T ss_pred HHHHHHHHHHHhCH
Confidence 89999999999953
|
| >d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Thermus thermophilus [TaxId: 274]
Probab=98.94 E-value=9.6e-09 Score=95.79 Aligned_cols=337 Identities=14% Similarity=0.059 Sum_probs=179.7
Q ss_pred cCEEEEEecCCCCCChhHHHHHHHHHHHh-cCcEEEEEeCCCCCCchhhhhhccc-chh-ccceeeee------------
Q 011954 74 SKLVLLVSHELSLSGGPLLLMELAFLLRG-VGAEVVWITNQKPNEPDEVIYSLEH-KML-DRGVQVLS------------ 138 (474)
Q Consensus 74 ~~kIl~v~~~~~~gG~~~~~~~l~~~L~~-~G~~V~v~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~------------ 138 (474)
||||++++..-+-- ..+.-+.++|++ .++++.++...... +.....+.. .+. ...+.+..
T Consensus 2 MkkI~~v~GtR~e~---~kl~pli~~l~~~~~~~~~li~tG~H~--~~~~~~~~~~~i~~d~~l~~~~~~~s~~~~~~~~ 76 (373)
T d1v4va_ 2 MKRVVLAFGTRPEA---TKMAPVYLALRGIPGLKPLVLLTGQHR--EQLRQALSLFGIQEDRNLDVMQERQALPDLAARI 76 (373)
T ss_dssp CEEEEEEECSHHHH---HHHHHHHHHHHTSTTEEEEEEECSSCH--HHHHHHHHTTTCCCSEECCCCSSCCCHHHHHHHH
T ss_pred CCeEEEEEEhhHHH---HHHHHHHHHHHhCCCCCEEEEEccCCh--hhhhCcchhcCCCccccCCCCCCCCCHHHHHHHH
Confidence 56899998531111 246678899977 57898877743221 111110000 000 00011100
Q ss_pred hhcHHHHhhhcCCCEEEEcccchhhHHhHHhhhcccccccceeeeeec-ccccc-----chhhhhhcccccccccccccc
Q 011954 139 AKGEKAINTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHE-MRGHY-----FKLEYVKHLPFVAGAMIDSYT 212 (474)
Q Consensus 139 ~~~~~~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~-~~~~~-----~~~~~~~~~~~~~~~~~~s~~ 212 (474)
...+..++...+||+|+++.-....+....... . ...|++. +|. ..... .....+.... .+++..+
T Consensus 77 ~~~~~~~l~~~kPD~vlv~GDr~e~la~a~aa~-~--~~ipi~H-iegG~rsg~~~~~~~de~~R~~is----kls~~hf 148 (373)
T d1v4va_ 77 LPQAARALKEMGADYVLVHGDTLTTFAVAWAAF-L--EGIPVGH-VEAGLRSGNLKEPFPEEANRRLTD----VLTDLDF 148 (373)
T ss_dssp HHHHHHHHHHTTCSEEEEESSCHHHHHHHHHHH-H--TTCCEEE-ETCCCCCSCTTSSTTHHHHHHHHH----HHCSEEE
T ss_pred HHHHhhhhhhcCcccccccccCccchhHHHHHH-H--hhhhhee-ecccccccccccCcchhhhhhhhc----cccceee
Confidence 113345566799999998864333322222221 1 1234433 333 11111 1112222222 2222222
Q ss_pred cH-HHHHHhHHHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcCCCCCCEEEEEecccccCcchHHHHHH
Q 011954 213 TA-EYWKNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLGVRDDDLLFAIINSVSRGKGQDLFLHS 291 (474)
Q Consensus 213 ~~-~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a 291 (474)
++ +..+++ ..+.|.++.++.++.+.. .+.+... ....+.....+.++++++..-|....++...+.++
T Consensus 149 ~~t~~~~~~-L~~~Ge~~~~I~~vG~p~-~D~i~~~---------~~~~~~~~~~~~~~~~lvt~hr~~n~~~~~~~~~~ 217 (373)
T d1v4va_ 149 APTPLAKAN-LLKEGKREEGILVTGQTG-VDAVLLA---------AKLGRLPEGLPEGPYVTVTMHRRENWPLLSDLAQA 217 (373)
T ss_dssp ESSHHHHHH-HHTTTCCGGGEEECCCHH-HHHHHHH---------HHHCCCCTTCCSSCEEEECCCCGGGGGGHHHHHHH
T ss_pred ecchhhhhh-hhhhcccccceeecccch-hhHHHhh---------hhhcccccccccccceeEEeccccccchHHHHHHH
Confidence 22 222222 335688888998888763 1111100 01111223345667888878877766777777777
Q ss_pred HHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCC--CChHHHHhcCCEEEEcCCCCCC
Q 011954 292 FYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKT--LTVSPYLASIDVLVQNSQARGE 369 (474)
Q Consensus 292 ~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~--~~~~~~~~~adv~v~ps~~~~E 369 (474)
+..+.+ ...++.+++..... ........ +......++.++.+. .+...++..|++++--|
T Consensus 218 ~~~~~~-------~~~~~~~i~p~~~~---~~~~~~~~---~~~~~~~n~~~~~~l~~~~~l~ll~~s~~vignS----- 279 (373)
T d1v4va_ 218 LKRVAE-------AFPHLTFVYPVHLN---PVVREAVF---PVLKGVRNFVLLDPLEYGSMAALMRASLLLVTDS----- 279 (373)
T ss_dssp HHHHHH-------HCTTSEEEEECCSC---HHHHHHHH---HHHTTCTTEEEECCCCHHHHHHHHHTEEEEEESC-----
T ss_pred HHHHhh-------hcccceeeeeeccc---ccchhhhh---hhhcccccceeeccchHHHHHHHhhhceeEeccc-----
Confidence 776655 23566666554321 11222222 333444688888864 67778899999999555
Q ss_pred CCchHHHHHHhcCCCEEEc-CCCCcceeeeeCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHH
Q 011954 370 CFGRITIEAMAFQLPVLGT-AAGGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRFLEH 448 (474)
Q Consensus 370 ~~~~~~~EAma~G~PvI~s-~~~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~fs~~ 448 (474)
|..+.||..+|+|+|.- +.|.-+|-++.+. -+++.. | .+++.+++..++++++.+..+.+. ..-|.--
T Consensus 280 --ssgi~Ea~~lg~P~Inir~~~eRqeg~~~g~-nvlv~~-d--~~~I~~~i~~~l~~~~~~~~~~~~-----~npYGdG 348 (373)
T d1v4va_ 280 --GGLQEEGAALGVPVVVLRNVTERPEGLKAGI-LKLAGT-D--PEGVYRVVKGLLENPEELSRMRKA-----KNPYGDG 348 (373)
T ss_dssp --HHHHHHHHHTTCCEEECSSSCSCHHHHHHTS-EEECCS-C--HHHHHHHHHHHHTCHHHHHHHHHS-----CCSSCCS
T ss_pred --chhhhcchhhcCcEEEeCCCccCHHHHhcCe-eEEcCC-C--HHHHHHHHHHHHcCHHHHhhcccC-----CCCCCCC
Confidence 45778999999999988 4465566655443 344444 4 899999999999998877766431 1124333
Q ss_pred HHHHHHHHHHHHHHh
Q 011954 449 HMSQRIALVLREVLQ 463 (474)
Q Consensus 449 ~~~~~~~~~~~~~~~ 463 (474)
..++++.+.+.+-+.
T Consensus 349 ~as~rI~~~L~~~~~ 363 (373)
T d1v4va_ 349 KAGLMVARGVAWRLG 363 (373)
T ss_dssp CHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhC
Confidence 444555555555543
|
| >d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Bacillus subtilis [TaxId: 1423]
Probab=98.56 E-value=5.4e-07 Score=83.76 Aligned_cols=337 Identities=13% Similarity=0.075 Sum_probs=161.4
Q ss_pred ccCEEEEEecCCCCCChh-HHHHHHHHHHHhc-CcEEEEEeCCCCCC-chhhhhhcccchhccceeee--e---------
Q 011954 73 KSKLVLLVSHELSLSGGP-LLLMELAFLLRGV-GAEVVWITNQKPNE-PDEVIYSLEHKMLDRGVQVL--S--------- 138 (474)
Q Consensus 73 ~~~kIl~v~~~~~~gG~~-~~~~~l~~~L~~~-G~~V~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~--------- 138 (474)
++|||++|+..-+ + ..+.-+.++|.+. ++++.++....... .......+.- ...+.+. .
T Consensus 1 ~k~Ki~~v~GtR~----e~~kl~pli~~l~~~~~~~~~li~tG~H~~~~~~~~~~~~i---~~~~~~~~~~~~~~~~~~~ 73 (377)
T d1o6ca_ 1 KKLKVMTVFGTRP----EAIKMAPLVLELKKYPEIDSYVTVTAQHRQMLDQVLDAFHI---KPDFDLNIMKERQTLAEIT 73 (377)
T ss_dssp CCEEEEEEECSHH----HHHHHHHHHHHGGGCTTEEEEEEECCSCGGGTHHHHHHTTC---CCSEECCCCCTTCCHHHHH
T ss_pred CCceEEEEEEchH----hHHHHHHHHHHHHhCCCCCEEEEEeCCCHHHHHHHHhhcCC---CCceeeecCCCCCCHHHHH
Confidence 3689999984211 1 2467788999875 67888777432211 1111111100 0011110 0
Q ss_pred ---hhcHHHHhhhcCCCEEEEcccchhhHHhHHhhhcccccccceeeeeecc-ccc-----cchhhhhhccccccccccc
Q 011954 139 ---AKGEKAINTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEM-RGH-----YFKLEYVKHLPFVAGAMID 209 (474)
Q Consensus 139 ---~~~~~~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~-~~~-----~~~~~~~~~~~~~~~~~~~ 209 (474)
...+..++...+||+|+++.-....+........ ...|++ ++|+- ... ......+.....+ ++
T Consensus 74 ~~~i~~~~~~~~~~kpD~v~v~GDr~e~la~a~aa~~---~~Ipi~-HiegG~~s~~~~~~~~de~~R~~iskl----s~ 145 (377)
T d1o6ca_ 74 SNALVRLDELFKDIKPDIVLVHGDTTTTFAGSLAAFY---HQIAVG-HVEAGLRTGNKYSPFPEELNRQMTGAI----AD 145 (377)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHH---TTCEEE-EESCCCCCSCTTTTTTHHHHHHHHHHH----CS
T ss_pred HHHHHhhhhhhhhcccceeEeeecccccchhhhhhhh---ccceEE-EEecccccccccccCchhhhccccccc----ee
Confidence 0123455667899999998743333222222211 123443 34432 111 1122223232222 22
Q ss_pred cccc-HHHHHHhHHHHhcCCCCCeEEEeCCCCccccchhhhhHHHHHhHHHHHHhcC-CCCCCEEEEEecccccC-cchH
Q 011954 210 SYTT-AEYWKNRTRERLGIRMPETYVVHLGNSKDLMDIAEDSVARRVLREHVRESLG-VRDDDLLFAIINSVSRG-KGQD 286 (474)
Q Consensus 210 s~~~-~~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~r~~~~-~~~~~~~i~~vgrl~~~-Kg~~ 286 (474)
..++ .+..+++ ..+.|.++.++.++.|..-.. +..... +......+. ...+.++++..-|.+.. +...
T Consensus 146 ~hf~~t~~~~~~-L~~~G~~~~~I~~vG~~~~D~-i~~~~~-------~~~~~~~~~~~~~~~~ilvt~Hr~~~~~~~~~ 216 (377)
T d1o6ca_ 146 LHFAPTGQAKDN-LLKENKKADSIFVTGNTAIDA-LNTTVR-------DGYSHPVLDQVGEDKMILLTAHRRENLGEPME 216 (377)
T ss_dssp EEEESSHHHHHH-HHHTTCCGGGEEECCCHHHHH-HHHHCC-------SSCCCSTTTTTTTSEEEEECC----------H
T ss_pred EEeecchhhhhh-hhhhccccceEeeccchhHHH-HHHHHH-------HHHhhhhhhhccCCceEEEEeccccccccchH
Confidence 2222 2222333 235688888999998764221 110000 000000111 12345666666555432 2233
Q ss_pred HHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHH-HHHcCCCCeEEEecCC--CChHHHHhcCCEEEEc
Q 011954 287 LFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNF-VAEKKIQDHVHFVNKT--LTVSPYLASIDVLVQN 363 (474)
Q Consensus 287 ~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~-~~~~~l~~~v~~~g~~--~~~~~~~~~adv~v~p 363 (474)
..+.++..+.. ...++.+++..... ...... .+.+...+++.++.+. .+...++..|++++--
T Consensus 217 ~~~~~~~~~~~-------~~~~~~~i~~~~~~-------~~~~~~~~~~~~~~~ni~~~~~l~~~~fl~llk~s~~vIgn 282 (377)
T d1o6ca_ 217 NMFKAIRRIVG-------EFEDVQVVYPVHLN-------PVVREAAHKHFGDSDRVHLIEPLEVIDFHNFAAKSHFILTD 282 (377)
T ss_dssp HHHHHHHHHHH-------HCTTEEEEEC-----------CHHHHHHHHC--CCSSEEECCCCCHHHHHHHHHHCSEEEEC
T ss_pred HHHHHHHhhcc-------cccccccccccccc-------cccchhhhhccccccceEeccccchHHHHHHHhhhheeecc
Confidence 44444443333 22556655443321 112222 2334445789999875 6788899999999954
Q ss_pred CCCCCCCCchHHHHHHhcCCCEEEcCC-CCcceeeeeCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Q 011954 364 SQARGECFGRITIEAMAFQLPVLGTAA-GGTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVK 442 (474)
Q Consensus 364 s~~~~E~~~~~~~EAma~G~PvI~s~~-~g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~ 442 (474)
| |-.+.||-.+|+|+|.-.. +.-+|-+..| +-++++. | .+++.+++..+++++..++.+.+ ..
T Consensus 283 S-------ss~i~Ea~~lg~P~Inir~~tERqe~~~~g-~nilv~~-~--~~~I~~~i~~~l~~~~~~~~~~~-----~~ 346 (377)
T d1o6ca_ 283 S-------GGVQEEAPSLGKPVLVLRDTTERPEGVEAG-TLKLAGT-D--EENIYQLAKQLLTDPDEYKKMSQ-----AS 346 (377)
T ss_dssp ---------CHHHHGGGGTCCEEEECSCCC---CTTTT-SSEEECS-C--HHHHHHHHHHHHHCHHHHHHHHH-----CC
T ss_pred c-------chhHHhhhhhhceEEEeCCCCcCcchhhcC-eeEECCC-C--HHHHHHHHHHHHhChHHHhhhcc-----CC
Confidence 4 2347899999999997744 3334554334 4455555 4 79999999999998876665532 11
Q ss_pred HhcCHHHHHHHHHHHHHHHHh
Q 011954 443 DRFLEHHMSQRIALVLREVLQ 463 (474)
Q Consensus 443 ~~fs~~~~~~~~~~~~~~~~~ 463 (474)
.-|.--..++++.+++.+-+.
T Consensus 347 npYGdG~as~rI~~~L~~~~~ 367 (377)
T d1o6ca_ 347 NPYGDGEASRRIVEELLFHYG 367 (377)
T ss_dssp CTTCCSCHHHHHHHHHHHHTT
T ss_pred CCCCCChHHHHHHHHHHHhhC
Confidence 124333445555555544443
|
| >d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Maltodextrin phosphorylase (MALP) species: Escherichia coli [TaxId: 562]
Probab=98.45 E-value=7.8e-06 Score=81.17 Aligned_cols=142 Identities=15% Similarity=0.105 Sum_probs=104.9
Q ss_pred CCCCCEEEEEecccccCcchHHHHHHHHHHHHHHHHhc-cCCCcEEEEEEcCCCCcCchHHHHHHHHHHHc----C----
Q 011954 266 VRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREKK-LQVPSMHAVVVGSDMNAQTKFETELRNFVAEK----K---- 336 (474)
Q Consensus 266 ~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~-~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~----~---- 336 (474)
++++.+.++++-|+..+|..++++.-..++.+.+++.. ....++++++.|...+.+. ..+++.+++.+. +
T Consensus 522 ldp~~LtigfaRRfa~YKR~~L~~~~i~~l~~~l~~~~~~~~~Pvq~IfaGKAhP~d~-~gK~iIk~I~~va~~in~dp~ 600 (796)
T d1l5wa_ 522 INPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYY-LAKNIIFAINKVADVINNDPL 600 (796)
T ss_dssp CCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTTCH-HHHHHHHHHHHHHHHHHTCTT
T ss_pred cChhhccchhhhhhhhhhcccchhhhHHHHHHHHhcCcccCCCceEEEEcCCCCCchH-HHHHHHHHHHHHHHHhcCChh
Confidence 56788999999999999999997777777666665421 0112589999998655543 333443333221 1
Q ss_pred C--CCeEEEecCC--CChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCcceeeee--CCceeeecC
Q 011954 337 I--QDHVHFVNKT--LTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVN--GTTGLLHPT 408 (474)
Q Consensus 337 l--~~~v~~~g~~--~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~~e~v~~--~~~G~l~~~ 408 (474)
+ ..+|.|+... +--..++..|||.++.++...|..|.+-+=||.-|.+.+++--|...|+..+ ++||+++-.
T Consensus 601 ~~~~~kVVFlenYdv~lA~~lv~g~DVwln~p~~p~EASGTSgMKaalNG~lnlstlDGw~vE~~~~vg~eN~f~fG~ 678 (796)
T d1l5wa_ 601 VGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEKVGEENIFIFGH 678 (796)
T ss_dssp TGGGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECSC
T ss_pred hccceeEEEeCCCchHHHHHHhcccchhhhCCCCCcccCCchHHHHHHcCCeeeecccchHHHHHHhcCccceEEecC
Confidence 1 1278998854 4445678999999998877789999999999999999999999998888753 789998853
|
| >d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Triterpene UDP-glucosyl transferase UGT71G1 species: Medicago truncatula [TaxId: 3880]
Probab=98.37 E-value=2.1e-05 Score=74.69 Aligned_cols=87 Identities=14% Similarity=0.045 Sum_probs=58.0
Q ss_pred CeEEEecCCCC-hHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCC----cce-eeeeCCceeeecCCC--
Q 011954 339 DHVHFVNKTLT-VSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGG----TME-IVVNGTTGLLHPTGK-- 410 (474)
Q Consensus 339 ~~v~~~g~~~~-~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g----~~e-~v~~~~~G~l~~~~d-- 410 (474)
+++.+..+... -...+..+|+|| .-|.-.++.||+++|+|+|+....+ ... +++....|+..+...
T Consensus 330 ~n~~v~~~~pq~~~l~~p~~~~fI------tHGG~gs~~eAl~~GVP~l~~P~~~DQ~~nA~rlve~~G~G~~l~~~~~~ 403 (461)
T d2acva1 330 GKGMICGWAPQVEVLAHKAIGGFV------SHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRK 403 (461)
T ss_dssp CSEEEESSCCHHHHHHSTTEEEEE------ECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCSSCCT
T ss_pred CCeEEEecCCHHHHHhcccCCEEE------ecCCccHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceEEeeccccc
Confidence 46666665422 222457889999 5566779999999999999986543 222 234445777765431
Q ss_pred ----CChHHHHHHHHHHhhC-HHHHH
Q 011954 411 ----EGVTPLANNIVKLATH-VERRL 431 (474)
Q Consensus 411 ----~~~~~la~~i~~ll~~-~~~~~ 431 (474)
.++++++++|.+++++ +..++
T Consensus 404 ~~~~~t~~~l~~a~~~vl~~d~~~r~ 429 (461)
T d2acva1 404 GSDVVAAEEIEKGLKDLMDKDSIVHK 429 (461)
T ss_dssp TCCCCCHHHHHHHHHHHTCTTCTHHH
T ss_pred cCCccCHHHHHHHHHHHhhCCHHHHH
Confidence 1279999999999964 43433
|
| >d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Escherichia coli [TaxId: 562]
Probab=98.35 E-value=1.2e-05 Score=74.36 Aligned_cols=344 Identities=13% Similarity=0.073 Sum_probs=168.9
Q ss_pred CEEEEEecCCCCCChhHHHHHHHHHHHhc-CcEEEEEeCCCCCC-chhhhhhcccchhccceeee----e--------hh
Q 011954 75 KLVLLVSHELSLSGGPLLLMELAFLLRGV-GAEVVWITNQKPNE-PDEVIYSLEHKMLDRGVQVL----S--------AK 140 (474)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~-G~~V~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~----~--------~~ 140 (474)
|||++|+..-+-- -.+.-+.++|.+. +.++.++......+ .......+.. .....+.+. . ..
T Consensus 1 MKi~~v~GtR~e~---~kl~pli~~l~~~~~~~~~li~tG~H~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~ 76 (376)
T d1f6da_ 1 MKVLTVFGTRPEA---IKMAPLVHALAKDPFFEAKVCVTAQHREMLDQVLKLFSI-VPDYDLNIMQPGQGLTEITCRILE 76 (376)
T ss_dssp CEEEEEECSHHHH---HHHHHHHHHHHHCTTCEEEEEECCTTGGGGHHHHHHTTC-CCSEECCCCSSSSCHHHHHHHHHH
T ss_pred CeEEEEEEhhHhH---HHHHHHHHHHHhCCCCCEEEEEcCCCHHHHHHHHHhcCC-CCCcccccCCCCCCHHHHHHHHHH
Confidence 7899998421100 2467788888774 68999887432211 1111010000 000000000 0 01
Q ss_pred cHHHHhhhcCCCEEEEcccchhhHHhHHhhhcccccccceeeeeecc-cccc-----chhhhhhcccccccccccccccH
Q 011954 141 GEKAINTALNADLVVLNTAVAGKWLDGVLKDKVSQVLPKVLWWIHEM-RGHY-----FKLEYVKHLPFVAGAMIDSYTTA 214 (474)
Q Consensus 141 ~~~~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~-~~~~-----~~~~~~~~~~~~~~~~~~s~~~~ 214 (474)
.+..++...+||+|+++.-....+........ ...|++ ++|+- .... .....+..... +++..+++
T Consensus 77 ~~~~~~~~~kPD~v~v~GDr~e~la~a~aa~~---~~ipi~-HiegG~~s~~~~~~~pde~~R~~isk----ls~~hf~~ 148 (376)
T d1f6da_ 77 GLKPILAEFKPDVVLVHGDTTTTLATSLAAFY---QRIPVG-HVEAGLRTGDLYSPWPEEANRTLTGH----LAMYHFSP 148 (376)
T ss_dssp HHHHHHHHHCCSEEEEETTCHHHHHHHHHHHT---TTCCEE-EESCCCCCSCTTSSTTHHHHHHHHHH----TCSEEEES
T ss_pred hhHHHHHhccCcceeeeccccchhhHHHHHHh---hCceEE-EEecccccccccccCchhhhhhhhcc----ceeEEEec
Confidence 23455667899999998643333322222211 123443 34442 1111 12223333322 22222222
Q ss_pred HHHHHhHHHHhcCCCCCeEEEeCCCCccccchhhhh--HHHHHhHHHHHHhcCCCC-CCEEEEEeccccc-CcchHHHHH
Q 011954 215 EYWKNRTRERLGIRMPETYVVHLGNSKDLMDIAEDS--VARRVLREHVRESLGVRD-DDLLFAIINSVSR-GKGQDLFLH 290 (474)
Q Consensus 215 ~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~--~~~~~~~~~~r~~~~~~~-~~~~i~~vgrl~~-~Kg~~~ll~ 290 (474)
......-..+.|..+.+++++.+.. .+.+...... .........+.....++. ++++++..=|.+. .+....++.
T Consensus 149 ~~~~~~~L~~~G~~~~~I~~vG~~~-~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ilvt~H~~~~~~~~~~~i~~ 227 (376)
T d1f6da_ 149 TETSRQNLLRENVADSRIFITGNTV-IDALLWVRDQVMSSDKLRSELAANYPFIDPDKKMILVTGHRRESFGRGFEEICH 227 (376)
T ss_dssp SHHHHHHHHHTTCCGGGEEECCCHH-HHHHHHHHHHTTTCHHHHHHHHTTCTTCCTTSEEEEECCCCBSSCCHHHHHHHH
T ss_pred cHHHHhHHHhcCCCccccceecCch-HHHHHHHHhhhhccchhhhhhhccccccCCCCceEEEecccchhhhhhHHHHHH
Confidence 2222222335788889999998764 2221111000 000001122222223333 3455555444432 345566666
Q ss_pred HHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCC--CChHHHHhcCCEEEEcCCCCC
Q 011954 291 SFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKT--LTVSPYLASIDVLVQNSQARG 368 (474)
Q Consensus 291 a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~--~~~~~~~~~adv~v~ps~~~~ 368 (474)
++..+.+ ...++.+++--... +....... +.+...+++.+..+. .+...+++.|++++--|.
T Consensus 228 ~l~~~~~-------~~~~~~ii~p~~~~---~~~~~~~~---~~~~~~~ni~~~~~l~~~~fl~ll~~a~~vignSs--- 291 (376)
T d1f6da_ 228 ALADIAT-------THQDIQIVYPVHLN---PNVREPVN---RILGHVKNVILIDPQEYLPFVWLMNHAWLILTDSG--- 291 (376)
T ss_dssp HHHHHHH-------HCTTEEEEEECCBC---HHHHHHHH---HHHTTCTTEEEECCCCHHHHHHHHHHCSEEEESSS---
T ss_pred HHhhhhh-------hcceeEEecccccc---hhhhhhHh---hhhcccccceeeccccHHHHHHHHhhceEEEecCc---
Confidence 6665544 23566666554321 01222222 223444688888864 567788999999996663
Q ss_pred CCCchHHHHHHhcCCCEEEcCCC-CcceeeeeCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCH
Q 011954 369 ECFGRITIEAMAFQLPVLGTAAG-GTMEIVVNGTTGLLHPTGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKDRFLE 447 (474)
Q Consensus 369 E~~~~~~~EAma~G~PvI~s~~~-g~~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~fs~ 447 (474)
..+.||-.+|+|+|.-..+ .-++-+..+ +-++++. | .+++.+++.+++.++.....+.. ...-|--
T Consensus 292 ----sgi~Ea~~lg~P~Inir~~ter~~~~~~g-~~i~v~~-~--~~~I~~ai~~~l~~~~~~~~~~~-----~~npYGd 358 (376)
T d1f6da_ 292 ----GIQEEAPSLGKPVLVMRDTTERPEAVTAG-TVRLVGT-D--KQRIVEEVTRLLKDENEYQAMSR-----AHNPYGD 358 (376)
T ss_dssp ----GGGGTGGGGTCCEEECSSCCSCHHHHHHT-SEEECCS-S--HHHHHHHHHHHHHCHHHHHHHHH-----SCCTTCC
T ss_pred ----chHhhHHHhCCCEEEcCCCccCccceecC-eeEECCC-C--HHHHHHHHHHHHhChHhhhhhcc-----CCCCCCC
Confidence 4677999999999865322 234444333 4455554 4 89999999999988765444321 1111333
Q ss_pred HHHHHHHHHHHHH
Q 011954 448 HHMSQRIALVLRE 460 (474)
Q Consensus 448 ~~~~~~~~~~~~~ 460 (474)
-..++++.+++++
T Consensus 359 G~as~rI~~iLk~ 371 (376)
T d1f6da_ 359 GQACSRILEALKN 371 (376)
T ss_dssp SCHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHh
Confidence 3445555555543
|
| >d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Glycogen phosphorylase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=98.35 E-value=7.7e-06 Score=81.25 Aligned_cols=194 Identities=12% Similarity=0.087 Sum_probs=133.2
Q ss_pred CCCCCCEEEEEecccccCcchHHHHHHHHHHHHHHHHh-ccCCCcEEEEEEcCCCCcCchHHHHHHHHHHHc----CC--
Q 011954 265 GVRDDDLLFAIINSVSRGKGQDLFLHSFYESLQLIREK-KLQVPSMHAVVVGSDMNAQTKFETELRNFVAEK----KI-- 337 (474)
Q Consensus 265 ~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~-~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~----~l-- 337 (474)
.++++.+.++++-|+..+|...+.+.-.-.+.+++++. .....+.++++.|...+.+. ..+++.+++.+. +.
T Consensus 545 ~ldp~~lfd~~arRfheYKRq~Ln~~~i~~ly~rlk~~~~~~~~P~q~IFaGKAhP~d~-~gK~iIk~I~~va~~in~dp 623 (824)
T d2gj4a1 545 HINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGYH-MAKMIIKLITAIGDVVNHDP 623 (824)
T ss_dssp CCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEEEECCCCTTCH-HHHHHHHHHHHHHHHHTTCT
T ss_pred CCCcchhhhhheeechhhhhhhhhHhhHHHHHHHhhhcccCCCCCeEEEEeCCCCCccH-HHHHHHHHHHHHHHHHhcCh
Confidence 36778899999999999999988444433333333321 11223689999998655543 344444433322 11
Q ss_pred ----CCeEEEecCC--CChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCcceeeee--CCceeeecCC
Q 011954 338 ----QDHVHFVNKT--LTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVN--GTTGLLHPTG 409 (474)
Q Consensus 338 ----~~~v~~~g~~--~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~~e~v~~--~~~G~l~~~~ 409 (474)
..+|.|+... +--..++.+|||..+.|+...|..|.+=+=||.-|.+.++|--|...|+.++ ++||+++-..
T Consensus 624 ~~~~~lkVvFlenY~v~lA~~li~g~Dvwln~p~~~~EASGTSgMK~alNGal~lstlDGwnvEi~~~vg~~N~~~fG~~ 703 (824)
T d2gj4a1 624 VVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMR 703 (824)
T ss_dssp TTGGGEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECSCC
T ss_pred hhccceeEEEcCCCchHHHHHhhhhhhhhhcCCCCCcccCCcchhHHHHcCCeeeccccchHHHHHHhcCcccEEEeCCC
Confidence 1268898854 4455678999999998887789999999999999999999999998887653 6789988543
Q ss_pred C----------CChHHHHHH----------------------------------------------------HHHHhhCH
Q 011954 410 K----------EGVTPLANN----------------------------------------------------IVKLATHV 427 (474)
Q Consensus 410 d----------~~~~~la~~----------------------------------------------------i~~ll~~~ 427 (474)
. .|+.++.+. +.....|+
T Consensus 704 ~~ev~~~~~~~y~~~~~y~~~~~l~~v~d~i~~~~~~~~~~~~f~~l~~~l~~~D~y~v~~Df~~y~~~q~~v~~~Y~d~ 783 (824)
T d2gj4a1 704 VEDVDRLDQRGYNAQEYYDRIPELRQIIEQLSSGFFSPKQPDLFKDIVNMLMHHDRFKVFADYEEYVKCQERVSALYKNP 783 (824)
T ss_dssp HHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHTTTCTTSTTTTHHHHHHHHHCCTTCTGGGHHHHHHHHHHHHHHHTCH
T ss_pred hhhhhHHhhcCCCHHHHHhhCHHHHHHHHHhccccCCCCCchhHHHHHHHHhcCChhhhhccHHHHHHHHHHHHHhhcCH
Confidence 2 013333221 22233458
Q ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 011954 428 ERRLTMGKKGYERVKDRFLEHHMSQRIALVLRE 460 (474)
Q Consensus 428 ~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~ 460 (474)
+.+.+|...+...+ -.||.++++++|.+-+-.
T Consensus 784 ~~W~~~~~~nia~~-g~FssdR~i~eY~~~iw~ 815 (824)
T d2gj4a1 784 REWTRMVIRNIATS-GKFSSDRTIAQYAREIWG 815 (824)
T ss_dssp HHHHHHHHHHHTTC-GGGBHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhcC-CCcChHHHHHHHHHHccC
Confidence 88888888777665 469999999999875543
|
| >d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: (Iso)flavonoid glycosyltransferase species: Medicago truncatula [TaxId: 3880]
Probab=98.14 E-value=0.0002 Score=67.83 Aligned_cols=94 Identities=18% Similarity=0.084 Sum_probs=66.8
Q ss_pred CeEEEecCCCChHHHH--hcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCC----cceee-eeCCceeeecCCCC
Q 011954 339 DHVHFVNKTLTVSPYL--ASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGG----TMEIV-VNGTTGLLHPTGKE 411 (474)
Q Consensus 339 ~~v~~~g~~~~~~~~~--~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g----~~e~v-~~~~~G~l~~~~d~ 411 (474)
+||.+..+.. ..+++ ..+++|| .-|...++.||+.+|+|+|+....+ ...-+ +....|+..+. +-
T Consensus 346 ~Nv~~~~~~P-q~~lL~hp~~~~fI------tHGG~~s~~Eal~~GVP~lv~P~~~DQ~~na~rv~~~~G~G~~l~~-~~ 417 (473)
T d2pq6a1 346 DRGLIASWCP-QDKVLNHPSIGGFL------THCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEIDT-NV 417 (473)
T ss_dssp TTEEEESCCC-HHHHHTSTTEEEEE------ECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECCS-SC
T ss_pred CceEEeeeCC-HHHHhcCCcCcEEE------ecCCccHHHHHHHcCCCEEeccchhhhHHHHHHHHHHcCeEEeeCC-Cc
Confidence 6898888864 35566 5778888 4566779999999999999987543 22223 33357888774 33
Q ss_pred ChHHHHHHHHHHhhCHHHHHHHHHHHHHHH
Q 011954 412 GVTPLANNIVKLATHVERRLTMGKKGYERV 441 (474)
Q Consensus 412 ~~~~la~~i~~ll~~~~~~~~~~~~~~~~~ 441 (474)
+.++++++|.++++|+.. ++++++|.+..
T Consensus 418 t~~~l~~ai~~vl~d~~~-~~~r~~a~~l~ 446 (473)
T d2pq6a1 418 KREELAKLINEVIAGDKG-KKMKQKAMELK 446 (473)
T ss_dssp CHHHHHHHHHHHHTSHHH-HHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcCChH-HHHHHHHHHHH
Confidence 489999999999999762 34555555533
|
| >d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: UDP glucose:flavonoid 3-o-glucosyltransferase species: Grape (Vitis vinifera) [TaxId: 29760]
Probab=98.13 E-value=7.7e-05 Score=70.56 Aligned_cols=83 Identities=14% Similarity=0.078 Sum_probs=61.8
Q ss_pred CeEEEecCCCChHHHH--hcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCCc----ceeeee-CCceeeecCCCC
Q 011954 339 DHVHFVNKTLTVSPYL--ASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGT----MEIVVN-GTTGLLHPTGKE 411 (474)
Q Consensus 339 ~~v~~~g~~~~~~~~~--~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g~----~e~v~~-~~~G~l~~~~d~ 411 (474)
.++.+..+... .+++ ..+|+|| .-|...++.||+.+|+|+|+....+= ..-+.+ ...|+..+.++-
T Consensus 319 ~nv~~~~~~pq-~~lL~hp~~~~fI------tHGG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~ 391 (450)
T d2c1xa1 319 GYGMVVPWAPQ-AEVLAHEAVGAFV------THCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGGVF 391 (450)
T ss_dssp TTEEEESCCCH-HHHHTSTTEEEEE------ECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECGGGSC
T ss_pred ccccccccCCh-HhhhccCceeEEE------ccCCccHHHHHHHcCCCEEecccccchHHHHHHHHHHcCcEEEecCCCc
Confidence 57888887633 3455 6678888 45567799999999999999876542 222433 468888876654
Q ss_pred ChHHHHHHHHHHhhCHH
Q 011954 412 GVTPLANNIVKLATHVE 428 (474)
Q Consensus 412 ~~~~la~~i~~ll~~~~ 428 (474)
+.+++.++|.++++|+.
T Consensus 392 t~~~l~~ai~~vL~d~~ 408 (450)
T d2c1xa1 392 TKSGLMSCFDQILSQEK 408 (450)
T ss_dssp CHHHHHHHHHHHHHSHH
T ss_pred CHHHHHHHHHHHhcCcH
Confidence 58999999999999975
|
| >d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Hydroquinone glucosyltransferase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=97.81 E-value=0.01 Score=55.48 Aligned_cols=84 Identities=13% Similarity=0.074 Sum_probs=59.7
Q ss_pred CCeEEEecCCCChHHHH--hcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEcCCCC----cceee-eeCCceeeecCCC
Q 011954 338 QDHVHFVNKTLTVSPYL--ASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGG----TMEIV-VNGTTGLLHPTGK 410 (474)
Q Consensus 338 ~~~v~~~g~~~~~~~~~--~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s~~~g----~~e~v-~~~~~G~l~~~~d 410 (474)
++||.+.++..+ .+++ ..+++|| .-|...++.||+.+|+|+|+....+ ....+ +.-..|+.....+
T Consensus 333 ~~nv~~~~w~Pq-~~lL~hp~~~~fV------tHGG~gS~~EAl~~GvP~v~~P~~~DQ~~nA~rv~e~lG~Gv~l~~~~ 405 (471)
T d2vcha1 333 KRGFVIPFWAPQ-AQVLAHPSTGGFL------THCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGD 405 (471)
T ss_dssp TTEEEEESCCCH-HHHHHSTTEEEEE------ECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCCT
T ss_pred CCCeeecccCCH-HHHhcCccCCEEE------ecCCccHHHHHHHcCCCEEEcccccccHHHHHHHHHHheeEEEEecCC
Confidence 578999998744 4577 5788888 4556779999999999999986543 12223 2234666554432
Q ss_pred ---CChHHHHHHHHHHhhCHH
Q 011954 411 ---EGVTPLANNIVKLATHVE 428 (474)
Q Consensus 411 ---~~~~~la~~i~~ll~~~~ 428 (474)
-+.++++++|.++++|++
T Consensus 406 ~~~~t~~~l~~ai~~vl~~~~ 426 (471)
T d2vcha1 406 DGLVRREEVARVVKGLMEGEE 426 (471)
T ss_dssp TSCCCHHHHHHHHHHHHTSTH
T ss_pred CCcCCHHHHHHHHHHHhCCcH
Confidence 237999999999999864
|
| >d1pswa_ c.87.1.7 (A:) ADP-heptose LPS heptosyltransferase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: ADP-heptose LPS heptosyltransferase II domain: ADP-heptose LPS heptosyltransferase II species: Escherichia coli [TaxId: 562]
Probab=97.58 E-value=0.0015 Score=58.99 Aligned_cols=111 Identities=12% Similarity=0.104 Sum_probs=65.3
Q ss_pred HHHHHHhcCCCCCCEEE-EEec-ccccCcch--HHHHHHHHHHHHHHHHhccCCCcEEEEEEcCCCCcCchHHHHHHHHH
Q 011954 257 REHVRESLGVRDDDLLF-AIIN-SVSRGKGQ--DLFLHSFYESLQLIREKKLQVPSMHAVVVGSDMNAQTKFETELRNFV 332 (474)
Q Consensus 257 ~~~~r~~~~~~~~~~~i-~~vg-rl~~~Kg~--~~ll~a~~~l~~~~~~~~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~ 332 (474)
+....+.++...++..+ +..| +....|.+ +...+.+..+.+ .+.+++++|+.. ..+..+...
T Consensus 167 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~k~wp~~~~~~L~~~l~~---------~~~~ivl~g~~~-----e~~~~~~~~ 232 (348)
T d1pswa_ 167 KSYTCNQFSLSSERPMIGFCPGAEFGPAKRWPHYHYAELAKQLID---------EGYQVVLFGSAK-----DHEAGNEIL 232 (348)
T ss_dssp HHHHHHHTTCCSSSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHH---------TTCEEEECCCGG-----GHHHHHHHH
T ss_pred HHHHHHHhccccCCCeEEeccccchhhccccchHHHhhhHHHHhh---------cCCccccccccc-----hHHHHHHHH
Confidence 44566677776655444 4444 33344644 335555555433 456788888653 233333332
Q ss_pred HHcC---CCCeEEEecCC--CChHHHHhcCCEEEEcCCCCCCCCchHHHHHHhcCCCEEEc
Q 011954 333 AEKK---IQDHVHFVNKT--LTVSPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGT 388 (474)
Q Consensus 333 ~~~~---l~~~v~~~g~~--~~~~~~~~~adv~v~ps~~~~E~~~~~~~EAma~G~PvI~s 388 (474)
+... ...-+.+.|.. .++..+++.||++|.+.. | .+=-|.++|+|+|+-
T Consensus 233 ~~~~~~~~~~~~~l~g~~sl~el~~li~~a~l~I~~Dt------g-~~HlAaa~g~p~i~l 286 (348)
T d1pswa_ 233 AALNTEQQAWCRNLAGETQLDQAVILIAACKAIVTNDS------G-LMHVAAALNRPLVAL 286 (348)
T ss_dssp TTSCHHHHTTEEECTTTSCHHHHHHHHHTSSEEEEESS------H-HHHHHHHTTCCEEEE
T ss_pred HhhhcccccccccccCCccHHHHHHHHhcceeEeecCc------c-HHHHHHHcCCCEEEE
Confidence 2221 12234455643 678889999999997764 2 456799999999986
|
| >d1uana_ c.134.1.1 (A:) Hypothetical protein TT1542 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: LmbE-like superfamily: LmbE-like family: LmbE-like domain: Hypothetical protein TT1542 species: Thermus thermophilus [TaxId: 274]
Probab=87.37 E-value=0.59 Score=38.37 Aligned_cols=38 Identities=13% Similarity=-0.073 Sum_probs=22.1
Q ss_pred cCEEEEEecCCCCCChhHHHHHHHHHHHhcCcEEEEEeCC
Q 011954 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWITNQ 113 (474)
Q Consensus 74 ~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 113 (474)
|||||+|.+...- .+.-.--....+.+.|++|.+++..
T Consensus 1 m~~VLvi~aHPDD--e~lg~GGtiak~~~~G~~V~vv~~T 38 (227)
T d1uana_ 1 MLDLLVVAPHPDD--GELGCGGTLARAKAEGLSTGILDLT 38 (227)
T ss_dssp CEEEEEEESSTTH--HHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CceEEEEEeCCCh--HHHHHHHHHHHHHHcCCeEEEEEEe
Confidence 6789999865322 1111111223356789999988843
|
| >d1i3ca_ c.23.1.1 (A:) Response regulator for cyanobacterial phytochrome {Synechocystis sp. PCC 6803, RCP1 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: CheY-like family: CheY-related domain: Response regulator for cyanobacterial phytochrome species: Synechocystis sp. PCC 6803, RCP1 [TaxId: 1148]
Probab=85.88 E-value=3.6 Score=30.51 Aligned_cols=112 Identities=11% Similarity=0.163 Sum_probs=69.0
Q ss_pred CcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCCCChHHHHhc---------CCEEEEcCCCCCCCCchHHHH
Q 011954 307 PSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYLAS---------IDVLVQNSQARGECFGRITIE 377 (474)
Q Consensus 307 ~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~---------adv~v~ps~~~~E~~~~~~~E 377 (474)
|..+++|+=+.+ .....+++..++.+....|.....-++..++++. -|++++=-.- .+.-|+.+++
T Consensus 2 ppk~ILiVdD~~----~~~~~l~~~L~~~g~~~~v~~a~~g~~Al~~l~~~~~~~~~~~pdlIllD~~m-P~~~G~el~~ 76 (144)
T d1i3ca_ 2 PPKVILLVEDSK----ADSRLVQEVLKTSTIDHELIILRDGLAAMAFLQQQGEYENSPRPNLILLDLNL-PKKDGREVLA 76 (144)
T ss_dssp CCEEEEEECCCH----HHHHHHHHHHHSCCSCEEEEEECSHHHHHHHHTTCGGGTTCCCCSEEEECSCC-SSSCHHHHHH
T ss_pred CCCEEEEEECCH----HHHHHHHHHHHHcCCCeEEEEECCHHHHHHHHHhchhhhccCCCCEEEEECcc-ccccchHHHH
Confidence 556677775543 3556666777777765556655544444444432 4677653321 3446777887
Q ss_pred HHh-----cCCCEEE-cCCCCc---ceeeeeCCceeeecCCCCChHHHHHHHHHHhh
Q 011954 378 AMA-----FQLPVLG-TAAGGT---MEIVVNGTTGLLHPTGKEGVTPLANNIVKLAT 425 (474)
Q Consensus 378 Ama-----~G~PvI~-s~~~g~---~e~v~~~~~G~l~~~~d~~~~~la~~i~~ll~ 425 (474)
.+- ..+|||. |..+.. .+..+-|.++++..|-+ .++|.+.|..+..
T Consensus 77 ~ir~~~~~~~iPvi~lT~~~~~~~~~~a~~~Ga~~yl~KP~~--~~~L~~~i~~l~~ 131 (144)
T d1i3ca_ 77 EIKQNPDLKRIPVVVLTTSHNEDDVIASYELHVNCYLTKSRN--LKDLFKMVQGIES 131 (144)
T ss_dssp HHHHCTTTTTSCEEEEESCCCHHHHHHHHHTTCSEEEECCSS--HHHHHHHHHHHHH
T ss_pred HHHhCcccCCCeEEEEECCCCHHHHHHHHHCCCCEEEECCCC--HHHHHHHHHHHHH
Confidence 763 3578775 433322 33344578899999988 9999998877653
|
| >d1mvoa_ c.23.1.1 (A:) PhoP receiver domain {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: CheY-like family: CheY-related domain: PhoP receiver domain species: Bacillus subtilis [TaxId: 1423]
Probab=85.42 E-value=0.5 Score=34.34 Aligned_cols=34 Identities=24% Similarity=0.345 Sum_probs=26.6
Q ss_pred ccCEEEEEecCCCCCChhHHHHHHHHHHHhcCcEEEEEeC
Q 011954 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWITN 112 (474)
Q Consensus 73 ~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~ 112 (474)
|++|||++-.+. .....+...|.+.||+|.....
T Consensus 1 M~krILiVDDd~------~~~~~l~~~L~~~g~~v~~a~~ 34 (121)
T d1mvoa_ 1 MNKKILVVDDEE------SIVTLLQYNLERSGYDVITASD 34 (121)
T ss_dssp CCCEEEEECSCH------HHHHHHHHHHHHTTCEEEEESS
T ss_pred CCCCEEEEECCH------HHHHHHHHHHHHCCCEEEEECC
Confidence 357899998743 5677788899999999987654
|
| >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Thermotoga maritima [TaxId: 2336]
Probab=85.14 E-value=1.7 Score=29.40 Aligned_cols=68 Identities=15% Similarity=0.170 Sum_probs=43.7
Q ss_pred CEEEEEecCCCCCChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhcccchhccceeeeehhcHHHHhhhcCCCEE
Q 011954 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEHKMLDRGVQVLSAKGEKAINTALNADLV 154 (474)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DiV 154 (474)
|||-|+ ..||. -+..||+.|.++|++|.---.... .....+...|+.+..-.....+ .++|+|
T Consensus 2 ~~ihfi----GIgG~--GMs~LA~~L~~~G~~VsGSD~~~~--------~~t~~L~~~Gi~i~~gh~~~~i---~~~d~v 64 (89)
T d1j6ua1 2 MKIHFV----GIGGI--GMSAVALHEFSNGNDVYGSNIEET--------ERTAYLRKLGIPIFVPHSADNW---YDPDLV 64 (89)
T ss_dssp CEEEEE----TTTSH--HHHHHHHHHHHTTCEEEEECSSCC--------HHHHHHHHTTCCEESSCCTTSC---CCCSEE
T ss_pred cEEEEE----eECHH--HHHHHHHHHHhCCCeEEEEeCCCC--------hhHHHHHHCCCeEEeeeccccc---CCCCEE
Confidence 667666 45665 355579999999999988753321 1344567778777543222222 468999
Q ss_pred EEccc
Q 011954 155 VLNTA 159 (474)
Q Consensus 155 ~~~~~ 159 (474)
+..+.
T Consensus 65 V~SsA 69 (89)
T d1j6ua1 65 IKTPA 69 (89)
T ss_dssp EECTT
T ss_pred EEecC
Confidence 88764
|
| >d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=84.86 E-value=1.8 Score=31.04 Aligned_cols=80 Identities=10% Similarity=0.082 Sum_probs=48.8
Q ss_pred cCEEEEEecCCCC-C-Chh--HHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhcccchhccceeeeehhcHHHHhhhc
Q 011954 74 SKLVLLVSHELSL-S-GGP--LLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEHKMLDRGVQVLSAKGEKAINTAL 149 (474)
Q Consensus 74 ~~kIl~v~~~~~~-g-G~~--~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (474)
.+|||++...... | |+| -...+.+++|++.|+++.++.+....-. ..+.+.+ ...+.-+.......+...+
T Consensus 4 ~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVs--td~d~aD---~lYfeplt~e~v~~Ii~~E 78 (121)
T d1a9xa4 4 REKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVS--TDYDTSD---RLYFEPVTLEDVLEIVRIE 78 (121)
T ss_dssp SCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSST--TSTTSSS---EEECCCCSHHHHHHHHHHH
T ss_pred CCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhh--cChhhcC---ceEEccCCHHHHHHHHHHh
Confidence 5689999875333 3 334 4577889999999999999985533211 1111111 1111112334456777789
Q ss_pred CCCEEEEcc
Q 011954 150 NADLVVLNT 158 (474)
Q Consensus 150 ~~DiV~~~~ 158 (474)
+||-|+...
T Consensus 79 ~p~~ii~~~ 87 (121)
T d1a9xa4 79 KPKGVIVQY 87 (121)
T ss_dssp CCSEEECSS
T ss_pred CCCEEEeeh
Confidence 999998864
|
| >d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: Polymyxin resistance protein ArnA, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=84.80 E-value=1.2 Score=35.71 Aligned_cols=77 Identities=14% Similarity=0.018 Sum_probs=41.6
Q ss_pred CEEEEEecCCCCCChhHHHHHHHHHHHhcCcEEEEEeCCCCCCc-hhhhhhcccchhccceeeeeh-----hcHHHHhhh
Q 011954 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWITNQKPNEP-DEVIYSLEHKMLDRGVQVLSA-----KGEKAINTA 148 (474)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 148 (474)
|||+++... ..-....++|.+.||+|..+....+... ......+.......++.++.. .........
T Consensus 1 Mkiv~~~~~-------~~g~~~l~~L~~~g~~I~~Vvt~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~~i~~ 73 (203)
T d2blna2 1 MKTVVFAYH-------DMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAAERGIPVYAPDNVNHPLWVERIAQ 73 (203)
T ss_dssp CEEEEEECH-------HHHHHHHHHHHHTTCEEEEEECCCC------CCCCHHHHHHHHTCCEECCSCCCSHHHHHHHHH
T ss_pred CeEEEEecC-------HHHHHHHHHHHHCCCCEEEEEcCCCCCCcccccCHHHHHHHHcCCcceecccccchhhhhhhhh
Confidence 677777641 2455667788889999975543222111 111112233334455655432 223345567
Q ss_pred cCCCEEEEcc
Q 011954 149 LNADLVVLNT 158 (474)
Q Consensus 149 ~~~DiV~~~~ 158 (474)
.++|++++..
T Consensus 74 ~~~Dlii~~g 83 (203)
T d2blna2 74 LSPDVIFSFY 83 (203)
T ss_dssp TCCSEEEEES
T ss_pred hcccceeeee
Confidence 8999998864
|
| >d2hy5b1 c.114.1.1 (B:205-336) Intracellular sulfur oxidation protein DsrF {Chromatium vinosum [TaxId: 1049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: DsrEFH-like superfamily: DsrEFH-like family: DsrEF-like domain: Intracellular sulfur oxidation protein DsrF species: Chromatium vinosum [TaxId: 1049]
Probab=83.41 E-value=1 Score=33.27 Aligned_cols=41 Identities=7% Similarity=0.069 Sum_probs=33.5
Q ss_pred cCEEEEEecCCCCCCh-hHHHHHHHHHHHhcCcEEEEEeCCC
Q 011954 74 SKLVLLVSHELSLSGG-PLLLMELAFLLRGVGAEVVWITNQK 114 (474)
Q Consensus 74 ~~kIl~v~~~~~~gG~-~~~~~~l~~~L~~~G~~V~v~~~~~ 114 (474)
|||++++....+.|+. .+-..+++.++...||+|.|+....
T Consensus 1 Mkk~l~ii~~aPy~s~~a~~al~~A~aa~~~~~~v~vff~~d 42 (132)
T d2hy5b1 1 VKKFMYLNRKAPYGTIYAWEALEVVLIGAAFDQDVCVLFLDD 42 (132)
T ss_dssp CCEEEEEECSCTTTSSHHHHHHHHHHHHGGGCCEEEEEECGG
T ss_pred CcEEEEEecCCCCCcHHHHHHHHHHHHHHcCCCCEEEEEech
Confidence 6789999987777654 3778899999999999999988553
|
| >d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=83.02 E-value=2 Score=31.16 Aligned_cols=80 Identities=11% Similarity=0.030 Sum_probs=49.5
Q ss_pred cCEEEEEecCCCC-C-Chh--HHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhcccchhccceeeeehhcHHHHhhhc
Q 011954 74 SKLVLLVSHELSL-S-GGP--LLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEHKMLDRGVQVLSAKGEKAINTAL 149 (474)
Q Consensus 74 ~~kIl~v~~~~~~-g-G~~--~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (474)
.+|||++...... | |+| -...+.+++|++.|+++.++.+....- ...+...+ ...+.-........+...+
T Consensus 7 ~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TV--std~d~aD---~lYfePlt~e~v~~Ii~~E 81 (127)
T d1a9xa3 7 IKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATI--MTDPEMAD---ATYIEPIHWEVVRKIIEKE 81 (127)
T ss_dssp CCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCG--GGCGGGSS---EEECSCCCHHHHHHHHHHH
T ss_pred CCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhh--hcChhhcc---eeeeecCCHHHHHHHHHHh
Confidence 5789999875333 3 334 457788999999999999987653321 11111111 1111123344566778889
Q ss_pred CCCEEEEcc
Q 011954 150 NADLVVLNT 158 (474)
Q Consensus 150 ~~DiV~~~~ 158 (474)
+||.|+..-
T Consensus 82 ~pd~il~~~ 90 (127)
T d1a9xa3 82 RPDAVLPTM 90 (127)
T ss_dssp CCSEEECSS
T ss_pred CcCCeEEEe
Confidence 999998764
|
| >d2d1pb1 c.114.1.1 (B:1-119) tRNA 2-thiouridine synthesizing protein C, TusC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: DsrEFH-like superfamily: DsrEFH-like family: DsrEF-like domain: tRNA 2-thiouridine synthesizing protein C, TusC species: Escherichia coli [TaxId: 562]
Probab=82.48 E-value=0.95 Score=32.67 Aligned_cols=41 Identities=5% Similarity=-0.066 Sum_probs=32.8
Q ss_pred cCEEEEEecCCCCCCh-hHHHHHHHHHHHhcCcEEEEEeCCC
Q 011954 74 SKLVLLVSHELSLSGG-PLLLMELAFLLRGVGAEVVWITNQK 114 (474)
Q Consensus 74 ~~kIl~v~~~~~~gG~-~~~~~~l~~~L~~~G~~V~v~~~~~ 114 (474)
|+||+++....+.|+. .+-..+++.++...|++|.++....
T Consensus 1 Mkkv~ii~~~~P~~~~~~~~al~~Ala~a~~~~~V~iff~~d 42 (119)
T d2d1pb1 1 MKRIAFVFSTAPHGTAAGREGLDALLATSALTDDLAVFFIAD 42 (119)
T ss_dssp CCCEEEEECSCTTTSTHHHHHHHHHHHHHTTCSCEEEEECGG
T ss_pred CcEEEEEEcCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEech
Confidence 5679999987776554 4678899999999999999987543
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=81.53 E-value=2.7 Score=36.41 Aligned_cols=73 Identities=14% Similarity=0.103 Sum_probs=40.7
Q ss_pred CEEEEEecCCCCCChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhcccchhccceeeee-----hhcHHHHhhhc
Q 011954 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEHKMLDRGVQVLS-----AKGEKAINTAL 149 (474)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 149 (474)
||||++. |.+..=..|++.|.++||+|+++.......... .. ........++.++. ...+....+..
T Consensus 1 MKiLItG------~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~-~~-~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~ 72 (338)
T d1udca_ 1 MRVLVTG------GSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSV-LP-VIERLGGKHPTFVEGDIRNEALMTEILHDH 72 (338)
T ss_dssp CEEEEET------TTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTH-HH-HHHHHHTSCCEEEECCTTCHHHHHHHHHHT
T ss_pred CEEEEEC------CCCHHHHHHHHHHHHCcCEEEEEECCCCcchhh-HH-HHHhhcCCCCEEEEeecCCHHHHHHHHhcc
Confidence 6777664 444677888999999999999985321111110 00 01112223444432 23445556667
Q ss_pred CCCEEE
Q 011954 150 NADLVV 155 (474)
Q Consensus 150 ~~DiV~ 155 (474)
+||+|+
T Consensus 73 ~~d~Vi 78 (338)
T d1udca_ 73 AIDTVI 78 (338)
T ss_dssp TCSEEE
T ss_pred CCCEEE
Confidence 899874
|
| >d2hy5a1 c.114.1.1 (A:1-130) Sulfurtransferase DsrE {Chromatium vinosum [TaxId: 1049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: DsrEFH-like superfamily: DsrEFH-like family: DsrEF-like domain: Sulfurtransferase DsrE species: Chromatium vinosum [TaxId: 1049]
Probab=81.47 E-value=1.4 Score=32.34 Aligned_cols=39 Identities=13% Similarity=-0.084 Sum_probs=29.8
Q ss_pred CEEEEEecCCCCCCh-hHHHHHHHHHHHhcCcEE-EEEeCC
Q 011954 75 KLVLLVSHELSLSGG-PLLLMELAFLLRGVGAEV-VWITNQ 113 (474)
Q Consensus 75 ~kIl~v~~~~~~gG~-~~~~~~l~~~L~~~G~~V-~v~~~~ 113 (474)
||++++....+.+.. .+....+++++.+.||+| .|+...
T Consensus 1 Mk~~i~v~~~P~~~~~a~~al~fA~aal~~gh~V~~vFf~~ 41 (130)
T d2hy5a1 1 MKFALQINEGPYQHQASDSAYQFAKAALEKGHEIFRVFFYH 41 (130)
T ss_dssp CEEEEEECSCTTTSTHHHHHHHHHHHHHHTTCEEEEEEECG
T ss_pred CEEEEEEcCCCCCcHHHHHHHHHHHHHHHCCCeEEEEEEec
Confidence 678888876555443 477899999999999999 477644
|
| >d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Probable oxidoreductase At4g09670 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=81.45 E-value=1.9 Score=33.71 Aligned_cols=72 Identities=15% Similarity=0.109 Sum_probs=48.8
Q ss_pred CcEEEEEEcCCCCcCchHHHHHHHHHHHcCCCCeEEEecCCCChHHHHh--cCCEEEEcCCCCCCCCchHHHHHHhcCCC
Q 011954 307 PSMHAVVVGSDMNAQTKFETELRNFVAEKKIQDHVHFVNKTLTVSPYLA--SIDVLVQNSQARGECFGRITIEAMAFQLP 384 (474)
Q Consensus 307 ~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~--~adv~v~ps~~~~E~~~~~~~EAma~G~P 384 (474)
++++++-+.+. ..+..+..+++.+++....+.. ++.++++ ..|+++..+. ...-.-.+.+|+..|++
T Consensus 24 ~~~~i~ai~d~------~~~~~~~~~~~~~~~~~~~~~~---~~~~ll~~~~iD~v~I~tp--~~~h~~~~~~~l~~g~~ 92 (184)
T d1ydwa1 24 PNATISGVASR------SLEKAKAFATANNYPESTKIHG---SYESLLEDPEIDALYVPLP--TSLHVEWAIKAAEKGKH 92 (184)
T ss_dssp TTEEEEEEECS------SHHHHHHHHHHTTCCTTCEEES---SHHHHHHCTTCCEEEECCC--GGGHHHHHHHHHTTTCE
T ss_pred CCCEEEEEEeC------CccccccchhccccccceeecC---cHHHhhhccccceeeeccc--chhhcchhhhhhhccce
Confidence 67887755554 3456677788888766555544 4555553 4688888775 33334467899999999
Q ss_pred EEEcC
Q 011954 385 VLGTA 389 (474)
Q Consensus 385 vI~s~ 389 (474)
|++-.
T Consensus 93 v~~EK 97 (184)
T d1ydwa1 93 ILLEK 97 (184)
T ss_dssp EEECS
T ss_pred eeccc
Confidence 98764
|
| >d1d4aa_ c.23.5.3 (A:) NAD(P)H:quinone reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Flavoproteins family: Quinone reductase domain: NAD(P)H:quinone reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=81.05 E-value=1.2 Score=37.54 Aligned_cols=41 Identities=20% Similarity=0.006 Sum_probs=31.9
Q ss_pred ccCEEEEEecCCCCCChh-HHHHHHHHHHHhcCcEEEEEeCC
Q 011954 73 KSKLVLLVSHELSLSGGP-LLLMELAFLLRGVGAEVVWITNQ 113 (474)
Q Consensus 73 ~~~kIl~v~~~~~~gG~~-~~~~~l~~~L~~~G~~V~v~~~~ 113 (474)
|.||||+|.....+.+.. ......+++|.+.||+|.++-..
T Consensus 1 m~KKiLiI~ahP~~~S~~~aL~~~~~~~l~~~G~eV~~~DLy 42 (273)
T d1d4aa_ 1 VGRRALIVLAHSERTSFNYAMKEAAAAALKKKGWEVVESDLY 42 (273)
T ss_dssp CCCEEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEEETT
T ss_pred CCCeEEEEEcCCCCccHHHHHHHHHHHHHHHCCCEEEEEECc
Confidence 478999998766666654 55667788899999999998753
|
| >d1j9ja_ c.106.1.1 (A:) SurE homolog TM1662 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: SurE-like superfamily: SurE-like family: SurE-like domain: SurE homolog TM1662 species: Thermotoga maritima [TaxId: 2336]
Probab=80.85 E-value=1.4 Score=36.55 Aligned_cols=39 Identities=23% Similarity=0.172 Sum_probs=28.1
Q ss_pred CEEEEEecCCCCCChhHHHHHHHHHHHhcCcEEEEEeCCCCCC
Q 011954 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWITNQKPNE 117 (474)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~ 117 (474)
||||+...+.... .-+..|+++|++ +|+|.|+.+.....
T Consensus 1 M~ILltNDDGi~s---~gl~~L~~~l~~-~~~V~vvAP~~~~S 39 (247)
T d1j9ja_ 1 MRILVTNDDGIQS---KGIIVLAELLSE-EHEVFVVAPDKERS 39 (247)
T ss_dssp CEEEEECSSCTTC---HHHHHHHHHHTT-TSEEEEEEESSCCT
T ss_pred CeEEEEcCCCCCC---hHHHHHHHHHhc-CCeEEEEecCCCCc
Confidence 7899988754332 346788888865 89999999765543
|
| >d1zgza1 c.23.1.1 (A:2-121) TorCAD operon transcriptional regulator TorD, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: CheY-like family: CheY-related domain: TorCAD operon transcriptional regulator TorD, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=80.42 E-value=1.7 Score=31.13 Aligned_cols=54 Identities=17% Similarity=0.201 Sum_probs=38.2
Q ss_pred cCEEEEEecCCCCCChhHHHHHHHHHHHhcCcEEEEEeCCCCCCchhhhhhcccchhccceeeeehhcHHHHhhhcCCCE
Q 011954 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWITNQKPNEPDEVIYSLEHKMLDRGVQVLSAKGEKAINTALNADL 153 (474)
Q Consensus 74 ~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di 153 (474)
++|||++-.+. .....+...|.+.||+|........ .........||+
T Consensus 1 P~rILiVDDd~------~~~~~l~~~L~~~g~~v~~a~~~~~--------------------------a~~~~~~~~~dl 48 (120)
T d1zgza1 1 PHHIVIVEDEP------VTQARLQSYFTQEGYTVSVTASGAG--------------------------LREIMQNQSVDL 48 (120)
T ss_dssp CCEEEEECSSH------HHHHHHHHHHHHTTCEEEEESSHHH--------------------------HHHHHHHSCCSE
T ss_pred CCEEEEEeCCH------HHHHHHHHHHHHCCCEEEEECCHHH--------------------------HHHHHHhcCCCE
Confidence 36899998753 5677888899999999987753210 223445678999
Q ss_pred EEEccc
Q 011954 154 VVLNTA 159 (474)
Q Consensus 154 V~~~~~ 159 (474)
|++-..
T Consensus 49 iilD~~ 54 (120)
T d1zgza1 49 ILLDIN 54 (120)
T ss_dssp EEEESC
T ss_pred Eeeehh
Confidence 998653
|
| >d2d1pa1 c.114.1.1 (A:1-128) tRNA 2-thiouridine synthesizing protein D, TusD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: DsrEFH-like superfamily: DsrEFH-like family: DsrEF-like domain: tRNA 2-thiouridine synthesizing protein D, TusD species: Escherichia coli [TaxId: 562]
Probab=80.36 E-value=1.4 Score=32.28 Aligned_cols=40 Identities=13% Similarity=0.021 Sum_probs=29.4
Q ss_pred CEEEEEecCCCCCC-hhHHHHHHHHHHHhcCcEE-EEEeCCC
Q 011954 75 KLVLLVSHELSLSG-GPLLLMELAFLLRGVGAEV-VWITNQK 114 (474)
Q Consensus 75 ~kIl~v~~~~~~gG-~~~~~~~l~~~L~~~G~~V-~v~~~~~ 114 (474)
||++++....+.++ .......+++++.++||+| .|+....
T Consensus 1 Mk~~i~v~~~P~~~~~a~~A~~fA~aal~~Gh~V~~vF~~~d 42 (128)
T d2d1pa1 1 MRFAIVVTGPAYGTQQASSAFQFAQALIADGHELSSVFFYRE 42 (128)
T ss_dssp CEEEEEECSCSSSSSHHHHHHHHHHHHHHTTCEEEEEEECGG
T ss_pred CEEEEEEecCCCCcHHHHHHHHHHHHHHhCCCceeEEEEech
Confidence 67777777555543 2466789999999999999 4876543
|