Citrus Sinensis ID: 011955

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470----
Protein Sequence
MGKKGKWFASVKNAFSPESKEKKDKKSKKKWFGKQKEEGSNSAPLETVKTTLPPPAPPLQPEEVEITVAENELSNHVANEEVITAVPAMAAVSADQSVTEVRIVTNTRFAGKSKEEAAAIRIQTAFRGYLARRALRALRGLVRLKLLMEGPVVKRQAANTLRCMQTLSRLQSQIRSRRVRMSEENQALQRQLLQKHAKELAMQMGEEWDDSIQSKEQVEANLLSKYEATMRRERAMAYSFTHQQTWKNSSKSSNPMFMDPRNPTWGWSWLERWMAARPWESRSATEKEPNNDQSSVKSANRSIVAGEISKSFARYQLNSDKLSPTTNQKISKTPKHQSPSTPTKSASSTVAKKTKPASPRGSVSGLDDDSRSMVSVQSYRRHSIAGSSVRDDESLPTSPSAPRYMVPTESAKAKSRLQSPLGVDKNGTPEKATLASAKKRLAYPPSPARPRRHSGPPKLESSINLEISVTNGSS
Secondary Structure (PSIPRED)
cccccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccHHHHHHHHcccccccccccHHHHHHHcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccccccccHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHcHHHHHcccccccEcccccEcccEEEEcccccccccccccccccccccccccHHHcccEcccccc
Coil and Loop (DISEMBL)
mgkkgkwfasvknafspeskekkdkksKKKWFgkqkeegsnsapletvkttlpppapplqpeeVEITVAENELsnhvaneevitAVPAMAAVSADQSVTEVRIVTntrfagksKEEAAAIRIQTAFRGYLARRALRALRGLVRLKLLMEGPVVKRQAANTLRCMQTLSRLQSQIRSRRVRMSEENQALQRQLLQKHAKELAMQMGEEWDDSIQSKEQVEANLLSKYEATMRRERAMAYSFThqqtwknsskssnpmfmdprnptwgwSWLERWMAarpwesrsatekepnndqssvksanRSIVAGEISKSFARYqlnsdklspttnqkisktpkhqspstptksasstvakktkpasprgsvsgldddsrsmvsvqsyrrhsiagssvrddeslptspsaprymvptesakaksrlqsplgvdkngtpekATLASAKkrlayppsparprrhsgppklessinLEISVTNGSS
Flexible Loop (DISEMBL)
mgkkgkwfasvknafspeskekkdkkskkkwfgkqkeegsnsapletvkTTLPPPAPPLQPEEVEITVAENELSNHVANEEVITAVPAMAAvsadqsvtevRIVTntrfagkskeeaAAIRIQTAFRGYLARRALRALRGLVRLKLlmegpvvkrqaantlrcmqtLSRLQSQIRSRRVRMSEENQALQRQLLQKHAKELAMQMGEEWDDSIQSKEQVEANLLSKYEATMRRERAMAYSFthqqtwknsskssnpmfmDPRNPTWGWSWLERWMAARPWEsrsatekepnndqssvksanrsIVAGEISKSFAryqlnsdklspttnqkisktpkhqspstptksasstvakktkpasprgsvsgldddsrsMVSVQSYRrhsiagssvrddeslptspsaprymvptesakaksrlqsplgvdkngtpekatlasakkrlayppsparprrhsgppklessinleisvtngss
Low Complexity Region (SEG)
MGKKGKWFASVKNAFspeskekkdkkskkkwfgkqkeeGSNSAPLETVKTTlpppapplqpEEVEITVAENELSNHVANEEVITAVPAMAAVSADQSVTEVRIVTNTRFAGKSKEEAAAIRIQTAFRGYlarralralrglvrlkllMEGPVVKRQAANTLRCMqtlsrlqsqirsrrvrMSEENQALQRQLLQKHAKELAMQMGEEWDDSIQSKEQVEANLLSKYEATMRRERAMAYSFTHQQTWKNSSKSSNPMFMDPRNPTWGWSWLERWMAARPWESRSATEKEPNNDQSSVKSANRSIVAGEISKSFARYQLNSDKLSPTTNQKISKTPKHQspstptksasstvakktkpasPRGSVSGLDDDSRSMVSVQSYRRHSIAGSSVRDDESLPTSPSAPRYMVPTESAKAKSRLQSPLGVDKNGTPEKATLASAKKRLAYPPSPARPRRHSGPPKLESSINLEISVTNGSS
Disordered region (IsUnstruct)
****************************************************************************VANEEVITAVPAMAAVSADQSVTEVRIVTNTRFAGKSKEEAAAIRIQTAFRGYLARRALRALRGLVRLKLLMEGPVVKRQAANTLRCMQT************************************************************************************************PTWGWSWLERWMAARP****************************************************************************************************************************************************************************************************
Disordered Region (DISOPRED)
MGKKGKWFA*************************************************************************************************************AIRIQTAFRGYLARRALRALRGLV********************CMQ*****************************************************************************************************WSWLERWMAARPWE**************************************************************************************************************************************************************************************************
Disordered Region (DISEMBL)
********ASVKNAF*****************************LETVKTTLPPPAPPLQPEEVEITVAENELSNHVANEEVITAVPAMAAVSADQSVTEVRIVTNTRFAGKSKEEAAAIRIQTAFRGYLARRALRALRGLVRLKLLMEGPVVKRQAANTLRCMQTLSRLQSQIRSRRVRMSEENQALQRQLLQKHAKELAMQMGEEWDDSIQSKEQVEANLLSKYEATMRRERAMAYSF*************NPMFMDPRNPTWGWSWLERWMAARPW*********************RSIVAGEISKSFARYQLNSDKL*****************************************************************************SAPRYMV*************PLGVDKNGTPEKATLASAKKRLA***************KLESSINLEISVTNGSS
Disordered Region (DISPRO)
*************************************************************************************************************AGKSKEEAAAIRIQTAFRGYLARRALRALRGLVRLKLLMEGPVVKRQAANTLRCMQTLSRLQSQIRSRRVRMSEENQALQRQLLQKHAKELAM****EWDDSIQSKEQVEANLLSKYEATMRRERAMAYSFTHQQTWKN***************TWGWSWLERWMAARPWE******************************************************************************************************************************************************KATLAS**KRLAYP******************************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGKKGKWFASVKNAFSPESKEKKDKKSKKKWFGKQKEEGSNSAPLETVKTTLPPPAPPLQPEEVEITVAENELSNHVANEEVITAVPAMAAVSADQSVTEVRIVTNTRFAGKSKEEAAAIRIQTAFRGYLARRALRALRGLVRLKLLMEGPVVKRQAANTLRCMQTLSRLQSQIRSRRVRMSEENQALQRQLLQKHAKELAMQMGEEWDDSIQSKEQVEANLLSKYEATMRRERAMAYSFTHQQTWKNSSKSSNPMFMDPRNPTWGWSWLERWMAARPWESRSATEKEPNNDQSSVKSANRSIVAGEISKSFARYQLNSDKLSPTTNQKISKTPKHQSPSTPTKSASSTVAKKTKPASPRGSVSGLDDDSRSMVSVQSYRRHSIAGSSVRDDESLPTSPSAPRYMVPTESAKAKSRLQSPLGVDKNGTPEKATLASAKKRLAYPPSPARPRRHSGPPKLESSINLEISVTNGSS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	474	2.2.26 [Sep-21-2011]
Q9SF32	454	Protein IQ-DOMAIN 1 OS=Ar	no	no	0.911	0.951	0.485	3e-95
Q8LPG9	668	Protein IQ-DOMAIN 14 OS=A	no	no	0.597	0.423	0.353	2e-37
Q8L4D8	587	Protein IQ-DOMAIN 31 OS=A	no	no	0.305	0.247	0.321	1e-13
Q9FXI5	794	Protein IQ-DOMAIN 32 OS=A	no	no	0.318	0.190	0.258	6e-11

>sp|Q9SF32|IQD1_ARATH Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana GN=IQD1 PE=1 SV=1

 Score =  349 bits (895), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 232/478 (48%), Positives = 293/478 (61%), Gaps = 46/478 (9%)

Query: 1   MGKKGKWFASVKNAFSPESKEKKDKKSKKKWFGKQKEEGSNSAPLETVKTTLPPPAPPLQ 60
           M KK KW  +VK AFSP+SK+ K +         + ++   S P+    +    P   ++
Sbjct: 1   MVKKAKWLKNVKKAFSPDSKKLKHE-------SVECQDSVISYPVLIATSRSSSPQFEVR 53

Query: 61  PEEVEITVAENELSNHVANEEVITAVPAMAAV----SADQSVTEVRIVTNTRFAGKSKEE 116
            +EV     E + + +  + + +TA  A   V    S+ +SV +  IV N RFAGKSKEE
Sbjct: 54  VDEVNY---EQKKNLYPPSSDSVTATVAHVLVDSPPSSPESVHQA-IVVN-RFAGKSKEE 108

Query: 117 AAAIRIQTAFRGYLARRALRALRGLVRLKLLMEGPVVKRQAANTLRCMQTLSRLQSQIRS 176
           AAAI IQ+ FRG+LARR  + +RG  RLKLLMEG VV+RQAA TL+CMQTLSR+QSQIRS
Sbjct: 109 AAAILIQSTFRGHLARRESQVMRGQERLKLLMEGSVVQRQAAITLKCMQTLSRVQSQIRS 168

Query: 177 RRVRMSEENQALQRQLLQKHAKELA-MQMGEEWDDSIQSKEQVEANLLSKYEATMRRERA 235
           RR+RMSEENQA  +QLLQKHAKEL  ++ G  W+ S QSKEQVEA +L KYEATMRRERA
Sbjct: 169 RRIRMSEENQARHKQLLQKHAKELGGLKNGGNWNYSNQSKEQVEAGMLHKYEATMRRERA 228

Query: 236 MAYSFTHQQTWKNSSKSSNPMFMDPRNPTWGWSWLERWMAARPWESRSATEKEPNNDQSS 295
           +AY+FTHQQ  K+ SK++NPMFMDP NPTWGWSWLERWMA RPWES    +   NND SS
Sbjct: 229 LAYAFTHQQNLKSFSKTANPMFMDPSNPTWGWSWLERWMAGRPWESSEKEQNTTNNDNSS 288

Query: 296 VK-SANRSIVAGEISKSFARYQLNSDKLSPTTNQKISKTPKHQSPSTPTKSASSTVAKKT 354
           VK S NR+   GE +KS  R +LNS                   P+TP  SASST  +  
Sbjct: 289 VKNSTNRNSQGGETAKSSNRNKLNSS----------------TKPNTP--SASSTATRNP 330

Query: 355 KPASPRGSVSGLDDDSRSMVSVQSYRRHSIAGSSVRDDESLPTSPSAPR--YMVPTESA- 411
           +   P  S            S +  RR SIA  SV DDE+L +S +A R   ++PT  + 
Sbjct: 331 RKKRPIPSSIKSKSSDDEAKSSERNRRPSIARPSVSDDETL-SSSTARRSSNLIPTTKSA 389

Query: 412 --KAKSRLQSPLGVDKNGTPEKATL---ASAKKRLAYPPSPA-RPRRHSGPPKLESSI 463
             K KS+  S + V  + T E + L   A AKKRL+   SPA +PRR S PPK+E  +
Sbjct: 390 RGKPKSQTSSRVAVTTSTTEESSILPEKAPAKKRLSTSASPAPKPRRSSAPPKVEKGV 447

Modulates expression of glucosinolate pathway genes. May associate with nucleic acids and regulate gene expression at the transcriptional or post-transcriptional level.
Arabidopsis thaliana (taxid: 3702)

>sp|Q8LPG9|IQD14_ARATH Protein IQ-DOMAIN 14 OS=Arabidopsis thaliana GN=IQD14 PE=1 SV=1

 Score =  157 bits (396), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 118/334 (35%), Positives = 183/334 (54%), Gaps = 51/334 (15%)

Query: 115 EEAAAIRIQTAFRGYLARRALRALRGLVRLKLLMEGPVVKRQAANTLRCMQTLSRLQSQI 174
           + A+A +IQ AFRGY+AR++ RAL+GLVRL+ ++ G  VKRQ  N ++ MQ + R+QSQI
Sbjct: 321 QHASATKIQGAFRGYMARKSFRALKGLVRLQGVVRGYSVKRQTINAMKYMQQVVRVQSQI 380

Query: 175 RSRRVRMSEENQALQRQLLQKHAKELAMQMG-EEWDDSIQSKEQVEANLLSKYEATMRRE 233
           +SRR++M  ENQA   Q+ +  AK  A + G + WDDS+ +KE+ ++    K +A ++RE
Sbjct: 381 QSRRIKM-LENQA---QVEKDEAKWAASEAGNDNWDDSVLTKEERDSRSQRKTDAIIKRE 436

Query: 234 RAMAYSFTHQQTWKNSSKSSNPMFMDPRN-PTWGWSWLERWMAARPWESRSATEKEPNND 292
           R+MAY+++ ++ WKNS KS+     D R+ P W W+W++R     P  S + +  +P  D
Sbjct: 437 RSMAYAYS-RKLWKNSPKSTQ----DNRSFPQW-WNWVDR---QNPLASPAPSYSQPQRD 487

Query: 293 QSSVKSANRSIVAGEISKSFARYQLNSDKLSPTTNQKISKTPKHQSPSTPTKSASSTVAK 352
                S    +    +S+S  ++ +  D    T+  + S++  H +PS P  + +S  + 
Sbjct: 488 FRLTPS---RLCPSPLSQSSKQHHIRLDNHFDTSTPRSSRSTFH-TPSRPIHTGTSRYS- 542

Query: 353 KTKPASPRGSVSGLDDDSRSMVSVQSYRRHSIAGSSVRDDESLPTSPSAPRYMVPTESAK 412
                  RG + G D                   S  +DD+SL + P  P YM PT SAK
Sbjct: 543 -------RGRLRGQD-------------------SPFKDDDSLTSCPPFPSYMAPTVSAK 576

Query: 413 AKSRLQSPLGVDKNGTPEKATLASAKKRLAYPPS 446
           AK R  S       GTP      S K+R++YPP+
Sbjct: 577 AKVRPNSNPKERVMGTP-----VSEKRRMSYPPT 605

May be involved in cooperative interactions with calmodulins or calmodulin-like proteins. May associate with nucleic acids and regulate gene expression at the transcriptional or post-transcriptional level.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8L4D8|IQD31_ARATH Protein IQ-DOMAIN 31 OS=Arabidopsis thaliana GN=IQD31 PE=1 SV=1

 Score = 78.2 bits (191), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/174 (32%), Positives = 82/174 (47%), Gaps = 29/174 (16%)

Query: 110 AGKSKEEAAAIRIQTAFRGYLARRALRALRGLVRLKLLMEGPVVKRQAANTLRCMQTLSR 169
           A + + E AA  +Q AFRGYLARRA  AL+G++RL+ L+ G +V+RQA  TL  +  + R
Sbjct: 107 AERIQREIAATSVQAAFRGYLARRAFWALKGIIRLQALIRGHLVRRQAVATLFSVMGIVR 166

Query: 170 LQSQIRSRRVRMSEENQALQR----QLLQKHAKELAMQMGEEWDDSIQSKEQVEANLLSK 225
           LQ+  R R +R S+    + R    QLLQ +                         L + 
Sbjct: 167 LQAFARGREIRKSDIGVQVYRKCRLQLLQGN------------------------KLANP 202

Query: 226 YEATMRRERAMAYSFTHQQTWKNSSKSSNPMFMDPRNPTWGWSWLERWMAARPW 279
            +A +  ++  A +F  Q+   +S K       D  NP     WLE W A+  W
Sbjct: 203 TDAYLGIKKLTANAFA-QKLLASSPKVLPVHAYDTSNPNSNLIWLENWSASCFW 255

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FXI5|IQD32_ARATH Protein IQ-DOMAIN 32 OS=Arabidopsis thaliana GN=IQD32 PE=1 SV=3

 Score = 69.3 bits (168), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 55/213 (25%), Positives = 90/213 (42%), Gaps = 62/213 (29%)

Query: 80  EEVITAVPAMAAVSADQSVTEVRIVTNTRFAGKSKE---EAAAIRIQTAFRGYLARRALR 136
           E+V + V   + V  ++S ++  I+       K  E   E+  + IQ A RG+LARR L 
Sbjct: 176 EDVTSEVEMASKVEPEESESDDVIIVRKESDEKVDEKLDESVIVVIQAAVRGFLARRELL 235

Query: 137 ALRGLVRLKLLMEGPVVKRQAANTLRCMQTLSRLQSQIRSR-------RVRM----SEEN 185
             + +++L+  + G +V+ QA  +LRC+Q + ++Q+ +R+R       RV      SE N
Sbjct: 236 RSKKVIKLQAAVRGHLVRSQAMGSLRCVQAIVKMQAMVRARHSTKDGSRVSATSDKSEPN 295

Query: 186 QALQRQLLQKHAKELAMQMGEEWDDSIQSKEQVEANLLSKYEATMRRERAMAYSFTHQQT 245
            A Q+ L  K AK L                                             
Sbjct: 296 AAAQKLLENKFAKHLM-------------------------------------------- 311

Query: 246 WKNSSKSSNPMFM--DPRNPTWGWSWLERWMAA 276
              S+  + P+ +  DP  P+  W+WLERWM+ 
Sbjct: 312 --ESTPKTKPINIKCDPTKPSSAWNWLERWMSV 342

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	474
224069348	479	predicted protein [Populus trichocarpa]	0.985	0.974	0.656	1e-171
224140165	472	predicted protein [Populus trichocarpa]	0.976	0.980	0.650	1e-169
225439898	479	PREDICTED: protein IQ-DOMAIN 1-like [Vit	0.976	0.966	0.643	1e-156
356545965	470	PREDICTED: protein IQ-DOMAIN 1-like [Gly	0.968	0.976	0.633	1e-155
255568402	466	calmodulin binding protein, putative [Ri	0.940	0.957	0.675	1e-154
357510601	468	IQ domain-containing protein [Medicago t	0.968	0.980	0.656	1e-150
225449126	482	PREDICTED: protein IQ-DOMAIN 1-like [Vit	0.968	0.952	0.637	1e-147
356537501	474	PREDICTED: protein IQ-DOMAIN 1-like [Gly	0.968	0.968	0.630	1e-147
147809623	482	hypothetical protein VITISV_018782 [Viti	0.968	0.952	0.632	1e-146
356572413	477	PREDICTED: protein IQ-DOMAIN 1-like [Gly	0.976	0.970	0.662	1e-142

>gi|224069348|ref|XP_002326336.1| predicted protein [Populus trichocarpa] gi|222833529|gb|EEE72006.1| predicted protein [Populus trichocarpa]

 Score =  607 bits (1564), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 316/481 (65%), Positives = 378/481 (78%), Gaps = 14/481 (2%)

Query: 1   MGKKGKWFASVKNAFSPESKEKKDKKS---KKKWFGKQKEEGSNSAPLETVKTTLPPPAP 57
           MG+KGKWF+SVK A SP+SKEKKD+KS   KKKWFGKQ+ + S+S  LE V    PPP  
Sbjct: 1   MGRKGKWFSSVKKALSPDSKEKKDQKSNKSKKKWFGKQQLD-SDSTSLENVTMRSPPPP- 58

Query: 58  PLQPEEVEITVAENELSNHVANEEVITAVPAMAAVSADQSVTEVRIVTNT-RFAGKSKEE 116
             QP+EV++    NE + H  +  V+TA  A  A    Q+ TEV   T   ++AGKSKEE
Sbjct: 59  --QPDEVKLIETTNEENQHTYSVPVVTAAVAEHAPITVQTTTEVFQPTKVNKYAGKSKEE 116

Query: 117 AAAIRIQTAFRGYLARRALRALRGLVRLKLLMEGPVVKRQAANTLRCMQTLSRLQSQIRS 176
            AAI+IQTAFRGY+ARRALRALRGL RLK LMEGP +KRQA +TL CMQTL+R+QSQI +
Sbjct: 117 VAAIKIQTAFRGYMARRALRALRGLFRLKSLMEGPTIKRQATHTLHCMQTLARVQSQIHT 176

Query: 177 RRVRMSEENQALQRQLLQKHAKEL-AMQMGEEWDDSIQSKEQVEANLLSKYEATMRRERA 235
           RR+RMSEENQALQRQLL +HAKE  ++Q+GEEWDDS+QSKEQ+EANLL+K+EA +RRERA
Sbjct: 177 RRIRMSEENQALQRQLLHEHAKEFESLQIGEEWDDSLQSKEQIEANLLNKFEAAVRRERA 236

Query: 236 MAYSFTHQQTWKNSSKSSNPMFMDPRNPTWGWSWLERWMAARPWESRSATEKEPNNDQSS 295
           +AYSF+HQQ WK SS++ NPMFM   NP+WGWSWLERWMAA PWESRS TEKE NND SS
Sbjct: 237 LAYSFSHQQAWKISSRAVNPMFMSG-NPSWGWSWLERWMAAHPWESRSMTEKELNNDHSS 295

Query: 296 VKSANRSIVAGEISKSFARYQLNSDKLSPTTNQKISKTPKHQSPSTPTKSASSTVAKKTK 355
           +KSA+RSI  G+ISKS+ARYQLNSDKL+P  +++ +KT   Q  STP K A+STVA+K K
Sbjct: 296 LKSASRSITGGDISKSYARYQLNSDKLTPRESERPTKTANLQFQSTPNKPAASTVARKLK 355

Query: 356 PASPRGSVSGLDDDSRSMVSVQS--YRRHSIAGSSVRDDESLPTSPSAPRYMVPTESAKA 413
            ASPR  + GLDD+S+S+VSVQS   RRHSIAGS VRDDESL +SP  P YMVPTESA+A
Sbjct: 356 SASPRSGIGGLDDESKSVVSVQSDHSRRHSIAGSFVRDDESLGSSPPLPSYMVPTESARA 415

Query: 414 KSRLQSPLGVDKNGTP--EKATLASAKKRLAYPPSPARPRRHSGPPKLESSINLEISVTN 471
           KSRLQ+PLG + NG P  EK +L SAKKRL+YPPSPA+ RR+SGPPKLESS+  E S   
Sbjct: 416 KSRLQNPLGAEMNGAPEKEKGSLGSAKKRLSYPPSPAKARRYSGPPKLESSLKAENSEAA 475

Query: 472 G 472
           G
Sbjct: 476 G 476

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224140165|ref|XP_002323455.1| predicted protein [Populus trichocarpa] gi|222868085|gb|EEF05216.1| predicted protein [Populus trichocarpa]

 Score =  601 bits (1550), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 311/478 (65%), Positives = 377/478 (78%), Gaps = 15/478 (3%)

Query: 1   MGKKGKWFASVKNAFSPESKEKKDKKSKKKWFGKQKEEGSNSAPLETVKTTLPPPAPPLQ 60
           MG+KGKWF+SVK A SP+ KEK D+K   KWFGKQ+ + S+S  LE V    PPP    Q
Sbjct: 1   MGRKGKWFSSVKKALSPDPKEKTDQK---KWFGKQQLD-SDSTSLENVTMLSPPP----Q 52

Query: 61  PEEVEITVAENELSNHVANEEVITA-VPAMAAVSADQSVTEVRIVTNTRFAGKSKEEAAA 119
           PEEV++    +E++ H     V TA VP  A  +   ++  V++    ++AGKSKEE AA
Sbjct: 53  PEEVKLIETTDEVNQHTFPVPVATAAVPEPAPTTVQTNIEVVQLTKVNKYAGKSKEEEAA 112

Query: 120 IRIQTAFRGYLARRALRALRGLVRLKLLMEGPVVKRQAANTLRCMQTLSRLQSQIRSRRV 179
           I+IQT FRGY+ARRALRALRGL RLK LMEGP +KRQA +TLRCMQTL+R+QSQI +RR+
Sbjct: 113 IKIQTTFRGYMARRALRALRGLARLKFLMEGPRIKRQATHTLRCMQTLARVQSQIHTRRI 172

Query: 180 RMSEENQALQRQLLQKHAKELA-MQMGEEWDDSIQSKEQVEANLLSKYEATMRRERAMAY 238
           RMSEENQALQRQLLQKHAKEL  +++GEEWDDS+QSKEQ+EA+LL+K+EA  RRERA+AY
Sbjct: 173 RMSEENQALQRQLLQKHAKELENLRIGEEWDDSLQSKEQIEASLLNKFEAATRRERALAY 232

Query: 239 SFTHQQTWKNSSKSSNPMFMDPRNPTWGWSWLERWMAARPWESRSATEKEPNNDQSSVKS 298
           +F+HQQT KNSS+S+NPMFM+  NP+WGWSWLERWMAA PWESRS  EKE NND SSVKS
Sbjct: 233 AFSHQQTLKNSSRSANPMFMNG-NPSWGWSWLERWMAAHPWESRSLMEKEHNNDHSSVKS 291

Query: 299 ANRSIVAGEISKSFARYQLNSDKLSPTTNQKISKTPKHQSPSTPTKSASSTVAKKTKPAS 358
           A+RSI  GEISKS+ARYQLNSDKL+P  +++ +KT   QSPSTP K A+STVA+K K AS
Sbjct: 292 ASRSITGGEISKSYARYQLNSDKLTPRESERPTKTTNLQSPSTPKKPAASTVARKLKSAS 351

Query: 359 PRGSVSGLDDDSRSMVSVQS--YRRHSIAGSSVRDDESLPTSPSAPRYMVPTESAKAKSR 416
           PR ++ G++DDSRSMVSVQS   RRHSIAGS VRDDESL +SP+ P YMVPT+SA+AKSR
Sbjct: 352 PRSNIGGIEDDSRSMVSVQSDRSRRHSIAGSFVRDDESLGSSPALPSYMVPTQSARAKSR 411

Query: 417 LQSPLGVDKNGTPEKATLASA--KKRLAYPPSPARPRRHSGPPKLESSINLEISVTNG 472
           + S LG +K+GTPEK   +S   KKRL+YPPSPA+ RR+SGPPKLESS N   SV  G
Sbjct: 412 IHSLLGAEKDGTPEKEKGSSGHTKKRLSYPPSPAKGRRYSGPPKLESSFNARNSVAAG 469

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225439898|ref|XP_002279479.1| PREDICTED: protein IQ-DOMAIN 1-like [Vitis vinifera]

 Score =  558 bits (1439), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 311/483 (64%), Positives = 370/483 (76%), Gaps = 20/483 (4%)

Query: 1   MGKKGKWFASVKNAFSPESKEKKDK---KSKKKWFGKQKEEGSNSAPLETVKTTLPPPAP 57
           MG+KG W +SVK A SPE KEKKD+   KSKKKWFGK K    N + LETV      P P
Sbjct: 1   MGRKGNWLSSVKKALSPEPKEKKDQRADKSKKKWFGKHKYPDPNPSSLETV------PGP 54

Query: 58  PLQP-EEVEITVAENELSNHVANEEVITAVPAMAAVSADQSVTEV-RIVTNTRFAGKSKE 115
            L P EEV+    +NE   HV +   + A   MA++   ++  EV  I T T+  GK+KE
Sbjct: 55  SLAPPEEVKTIEPDNEHHKHVYS---VAATTTMASLDVPETDVEVVEITTLTQSTGKAKE 111

Query: 116 EAAAIRIQTAFRGYLARRALRALRGLVRLKLLMEGPVVKRQAANTLRCMQTLSRLQSQIR 175
           EAAAI+IQTAFRGYLARRALRALRGLVRL+ L++G  VKRQAANTLRCMQTL+R+QSQI 
Sbjct: 112 EAAAIKIQTAFRGYLARRALRALRGLVRLQSLIQGTAVKRQAANTLRCMQTLARVQSQIC 171

Query: 176 SRRVRMSEENQALQRQLLQKHAKEL-AMQMGEEWDDSIQSKEQVEANLLSKYEATMRRER 234
            RR+RMSEENQALQRQLLQK AKE   ++MGEEWDDS+QSKEQ+EA LL+K  A MRRER
Sbjct: 172 YRRIRMSEENQALQRQLLQKQAKEFEQLKMGEEWDDSLQSKEQIEAGLLNKQGAAMRRER 231

Query: 235 AMAYSFTHQQTWKNSSKSSNPMFMDPRNPTWGWSWLERWMAARPWESRSATEKEPNNDQS 294
           A+AY+F+HQQ WKNSSKS+N +FMDP NP WGWSWLERWMAARPWESRS T+KE NNDQ 
Sbjct: 232 ALAYAFSHQQAWKNSSKSTNLLFMDPSNPHWGWSWLERWMAARPWESRSTTDKELNNDQL 291

Query: 295 SVKSANRSIVAGEISKSFARYQLNSDKLSPTTNQKISKTPKHQSPSTP--TKSASSTVAK 352
           S+KS +RSI  GEI+K++AR+ L+S K SPT +QK    P  QSPSTP     +SS+ A 
Sbjct: 292 SIKSGSRSITGGEITKAYARHLLDSSKPSPTASQKPYHPPARQSPSTPPSKAVSSSSAAG 351

Query: 353 KTKP-ASPRGSVSGLDDDSRSMVSVQS--YRRHSIAGSSVRDDESLPTSPSAPRYMVPTE 409
           K KP ASPRG++ G DDD++SMVS+QS  +RRHSIAGSSV DDESL +SP+ P YM PT+
Sbjct: 352 KFKPAASPRGNLWGQDDDTKSMVSIQSERFRRHSIAGSSVGDDESLASSPAVPSYMAPTK 411

Query: 410 SAKAKSRLQSPLGVDKNGTPEKATLASAKKRLAYPPSPARPRRHSGPPKLESSINLEISV 469
           SAKAKSRLQSPLG++ NGTPEK +   AKKRL++P SPARPRRHSGPP++ESS   E  V
Sbjct: 412 SAKAKSRLQSPLGLENNGTPEKGSSGIAKKRLSFPASPARPRRHSGPPRVESSSLTEGIV 471

Query: 470 TNG 472
           +NG
Sbjct: 472 SNG 474

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356545965|ref|XP_003541403.1| PREDICTED: protein IQ-DOMAIN 1-like [Glycine max]

 Score =  553 bits (1426), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 304/480 (63%), Positives = 363/480 (75%), Gaps = 21/480 (4%)

Query: 1   MGKKGK-WFASVKNAFSPESKEKKDK---KSKKKWFGKQKEEGSNSAPLETVKTTLPPPA 56
           MG++G  WF++VK A SPE KEK D+   +SKKKWFGKQK + S S       T+    A
Sbjct: 1   MGRRGSSWFSTVKKALSPEPKEKNDQNSSRSKKKWFGKQKLQTSES-------TSQTDNA 53

Query: 57  PPLQPEEVEITVAENELSNHVANEEVITAVPAMAAVSADQ-SVTEVRIVTNTRFAGKSKE 115
           PPL P E+ +T  E+E+S+     EV TAV A+  V A Q +  EV+  T  +F  K  E
Sbjct: 54  PPLPPPEIILTHVESEISHERI--EVATAVDAVEPVPAVQMAAAEVQATTTVQFNSKPTE 111

Query: 116 EAAAIRIQTAFRGYLARRALRALRGLVRLKLLMEGPVVKRQAANTLRCMQTLSRLQSQIR 175
           E AAIRIQ AFRGYLARR LRALRGLVRL+ LMEGPVVKRQA +TLR MQT + LQ+QIR
Sbjct: 112 EVAAIRIQKAFRGYLARRELRALRGLVRLRSLMEGPVVKRQAISTLRSMQTFAHLQTQIR 171

Query: 176 SRRVRMSEENQALQRQLLQKHAKEL-AMQMGEEWDDSIQSKEQVEANLLSKYEATMRRER 234
           SRR+RM EENQ LQ+QLLQKHAKEL ++++GEEWDDSIQSKEQVEA LLSKYEA MRRER
Sbjct: 172 SRRLRMLEENQELQKQLLQKHAKELESIRLGEEWDDSIQSKEQVEAKLLSKYEAAMRRER 231

Query: 235 AMAYSFTHQQTWKNSSKSSNPMFMDPRNPTWGWSWLERWMAARPWESRSATEKEPNNDQS 294
           AMAYSF+HQQ WKN+S+S NPMFMDP NP WGWSWLERWMAARPWES S  EKE  ND  
Sbjct: 232 AMAYSFSHQQNWKNASRSVNPMFMDPTNPAWGWSWLERWMAARPWESHSLMEKE-KNDNK 290

Query: 295 SVKSANRSIVAGEISKSFARYQLNSDKLSPTTNQKISKTPKHQSPSTPTKSASSTVAKKT 354
           S++S++R I + EISKSFA++QLNS+K SPT +Q    +P  +S S P K +S  VA+K 
Sbjct: 291 SLRSSSRGITSAEISKSFAKFQLNSEKHSPTASQNPG-SPNFESHSNPPKPSSPAVARKL 349

Query: 355 KPASPRGSVSGLDDDSRSMVSVQSY--RRHSIAGSSVRDDESLPTSPSAPRYMVPTESAK 412
           K ASP+  +  +DD ++SMVSVQS   RRHSIAGS V DDESL +SPS P YMVPT+SAK
Sbjct: 350 KKASPK-DILAIDDGTKSMVSVQSERPRRHSIAGSIVGDDESLASSPSIPSYMVPTKSAK 408

Query: 413 AKSRLQSPLGVDKNGTPEKATLASAKKRLAYPPSPARPRRHSGPPKLESSINLEISVTNG 472
           AKSR+QSP   + NGTP+K +  +AKKRL++P SPARPRRHSGPPK+ESS N EI+V NG
Sbjct: 409 AKSRMQSPFAAE-NGTPDKGSSGTAKKRLSFPASPARPRRHSGPPKVESSFNAEITVGNG 467

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255568402|ref|XP_002525175.1| calmodulin binding protein, putative [Ricinus communis] gi|223535472|gb|EEF37141.1| calmodulin binding protein, putative [Ricinus communis]

 Score =  551 bits (1419), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 306/453 (67%), Positives = 361/453 (79%), Gaps = 7/453 (1%)

Query: 26  KSKKKWFGKQKEEGSNSAPLETVKTTLPPPAPPLQPEEVEITVAENELSNHVANEEVITA 85
           KSKKKWFGKQ +  S+S  +E  +  L PP PP QPEEV+     NE + H A    + A
Sbjct: 13  KSKKKWFGKQHQLYSDSISIENARD-LSPPLPPPQPEEVKTIETTNEQNVHAAYSVPVAA 71

Query: 86  VPAMAAVSADQSVTEV-RIVTNTRFAGKSKEEAAAIRIQTAFRGYLARRALRALRGLVRL 144
             A   +   ++  EV R+V   +FAGKS EE AAI+IQTAF+GYLARRALRALRGL RL
Sbjct: 72  AAAEPVLPPLETTMEVVRVVKVNKFAGKSGEEMAAIKIQTAFKGYLARRALRALRGLGRL 131

Query: 145 KLLMEGPVVKRQAANTLRCMQTLSRLQSQIRSRRVRMSEENQALQRQLLQKHAKELA-MQ 203
           K LMEGP +KRQA +TLRCMQTL+R+QSQI SRR+RMSEENQALQRQLLQKHA+EL  ++
Sbjct: 132 KSLMEGPTIKRQATHTLRCMQTLARVQSQIHSRRIRMSEENQALQRQLLQKHAQELEKLR 191

Query: 204 MGEEWDDSIQSKEQVEANLLSKYEATMRRERAMAYSFTHQQTWKNSSKSSNPMFMDPRNP 263
           MGEEWDDS+QSKEQ+EANLL+KYEA MRRERA+AYSFTHQQTWKNSS+S+NP+FM   NP
Sbjct: 192 MGEEWDDSLQSKEQIEANLLNKYEAAMRRERALAYSFTHQQTWKNSSRSANPIFMSSSNP 251

Query: 264 TWGWSWLERWMAARPWESRSATEKEPNNDQSSVKSANRSIVAGEISKSFARYQLNSDKLS 323
           TWGWSWLERWMAA PWE    TEKE +ND SSVK+A+RS+V GEISKS+ARYQLNSDKLS
Sbjct: 252 TWGWSWLERWMAAHPWEKGGMTEKELSNDHSSVKTASRSMVGGEISKSYARYQLNSDKLS 311

Query: 324 PTTNQKISKTPKHQSPSTPTKSASSTVAKKTKPASPRGSVSGLDDDSRSMVSVQS--YRR 381
           P  ++K+ +    +SP TP+K  SST+A+K K ASPR S+ G DDD+RS++S+QS  YRR
Sbjct: 312 PAESEKVRQAMSPRSPLTPSKPGSSTIARKLKSASPRSSIGGADDDNRSIISMQSDRYRR 371

Query: 382 HSIAGSSVRDDESLPTSPSAPRYMVPTESAKAKSRLQSPLGVDKNGTP--EKATLASAKK 439
           HSIAGSSVRDDESL +S + P YMVPTESA+AKSRLQSPLGVDKNGT   EK  L  AKK
Sbjct: 372 HSIAGSSVRDDESLGSSSAVPSYMVPTESARAKSRLQSPLGVDKNGTSEKEKGPLGPAKK 431

Query: 440 RLAYPPSPARPRRHSGPPKLESSINLEISVTNG 472
           RL+YPPSPARPRR  GP K+ES++N EI+VTNG
Sbjct: 432 RLSYPPSPARPRRQLGPRKMESNLNAEIAVTNG 464

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357510601|ref|XP_003625589.1| IQ domain-containing protein [Medicago truncatula] gi|355500604|gb|AES81807.1| IQ domain-containing protein [Medicago truncatula] gi|388521149|gb|AFK48636.1| unknown [Medicago truncatula]

 Score =  536 bits (1381), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 314/478 (65%), Positives = 373/478 (78%), Gaps = 19/478 (3%)

Query: 1   MGKKGKWFASVKNAFSPESKEKKDKKSKKKWFGKQKEEGSNSAPLETVKTTLPPPAPPLQ 60
           MGKKG WF++VK A SP+SK+    KSKKKWFGKQK + S+  P   + T LP P P   
Sbjct: 1   MGKKGNWFSTVKKALSPDSKKSS--KSKKKWFGKQKLQTSD--PSVEIDTALPLPPP--- 53

Query: 61  PEEVEITVAENELSNHVANEEVITAVPAMAAV-SADQSVTEVRIVTNTRFAGKSKEEAAA 119
            E++++T  EN+ +NH    E+ T V     V S   +V + +  T +RFAGK K+E AA
Sbjct: 54  -EDIKLTDIENQ-NNHHNVAEITTVVDVEEPVRSVQTAVVKTQAATVSRFAGKPKDEVAA 111

Query: 120 IRIQTAFRGYLARRALRALRGLVRLKLLMEGPVVKRQAANTLRCMQTLSRLQSQIRSRRV 179
           I+IQTAFRGYLARRALRALRGLVRLK LMEGP VKRQA +TLR MQTL+R+QSQIRSRRV
Sbjct: 112 IKIQTAFRGYLARRALRALRGLVRLKTLMEGPAVKRQAMSTLRSMQTLARVQSQIRSRRV 171

Query: 180 RMSEENQALQRQLLQKHAKEL-AMQMGEEWDDSIQSKEQVEANLLSKYEATMRRERAMAY 238
           RM EENQALQRQLLQKHAKEL  M++GEEWDDS+QSKEQ+EA LLSKYEATMRRERA+AY
Sbjct: 172 RMLEENQALQRQLLQKHAKELETMRIGEEWDDSLQSKEQIEAKLLSKYEATMRRERALAY 231

Query: 239 SFTHQQTWKNSSKSSNPMFMDPRNPTWGWSWLERWMAARPWESRSATEKEPNNDQSSVKS 298
           +FTHQQ  KNSS+S NPMF+DP NPTWGWSW+ERWMAARPWESR   +KE  ND SSVKS
Sbjct: 232 AFTHQQNSKNSSRSMNPMFVDPTNPTWGWSWIERWMAARPWESRGLVDKE-LNDHSSVKS 290

Query: 299 ANRSIVAGEISKSFARYQLNSDKLSPTTNQKISKTPKHQSPSTPTKSASSTVAKKTKPAS 358
           ++RSI+ GEISKSFAR+QLNS+  SP  +Q    +P  QS STPTK AS++VA+K K AS
Sbjct: 291 SSRSIIGGEISKSFARFQLNSEIHSPVASQN-PGSPSFQSNSTPTKPASASVARKLKKAS 349

Query: 359 PRGSVSGLDDDSRSMVSVQS--YRRHSIAGSSVRDDESLPTSPSAPRYMVPTESAKAKSR 416
           P+GS   +DDDS+SM SVQS  +RRHSIAGSSVRDDESL +SPS P YMVPT+SAKA+ R
Sbjct: 350 PKGSWV-MDDDSKSMASVQSDRFRRHSIAGSSVRDDESLASSPSVPSYMVPTQSAKARLR 408

Query: 417 L--QSPLGVDKNGTPEKATLASAKKRLAYPPSPARPRRHSGPPKLESSINLEISVTNG 472
              QSPL   +NG  EK +  +AKKRL++P SPARPRRHSGPPK+E++IN E+ V NG
Sbjct: 409 TQSQSPLA-KENGKQEKGSFGTAKKRLSFPASPARPRRHSGPPKVETAINAELPVPNG 465

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225449126|ref|XP_002277282.1| PREDICTED: protein IQ-DOMAIN 1-like [Vitis vinifera]

 Score =  529 bits (1362), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 302/474 (63%), Positives = 353/474 (74%), Gaps = 15/474 (3%)

Query: 1   MGKKGKWFASVKNAFSPESKEKKDK---KSKKKWFGKQKEEGSNSAPLETVKTTLPPPAP 57
           MGKKG WF++VK A SPE KEKKDK   KSKKKWFGK K     S+  E         AP
Sbjct: 1   MGKKGNWFSAVKKALSPEPKEKKDKTTPKSKKKWFGKHKNLDPVSSSTENAMPLP---AP 57

Query: 58  PLQPEEVEITVAENELSNHV-ANEEVITAVPAMAAVSADQSVTEVRIVTNTRFAGKSKEE 116
               E+V++T AENE S H  +           A  +A  +   VR+ T TRF+GKSKEE
Sbjct: 58  APPIEDVKLTEAENEQSKHAYSVALATAVAAEAAVAAAHAAAEVVRLTTVTRFSGKSKEE 117

Query: 117 AAAIRIQTAFRGYLARRALRALRGLVRLKLLMEGPVVKRQAANTLRCMQTLSRLQSQIRS 176
            AAI+IQTAFRGYLARRALRALRGLVRLK L++G  VKRQA  TLRCMQTL+R+QSQIR+
Sbjct: 118 VAAIKIQTAFRGYLARRALRALRGLVRLKSLIQGQSVKRQATTTLRCMQTLARVQSQIRA 177

Query: 177 RRVRMSEENQALQRQLLQKHAKELA---MQMGEEWDDSIQSKEQVEANLLSKYEATMRRE 233
           RR+RMSEEN ALQRQL  K  KEL      MG++WDDS+QSKEQ+EANL SK EA +RRE
Sbjct: 178 RRIRMSEENLALQRQLQLKRDKELEKLRASMGDDWDDSVQSKEQIEANLQSKQEAAVRRE 237

Query: 234 RAMAYSFTHQQTWKNSSKSSNPMFMDPRNPTWGWSWLERWMAARPWESRSATEKEPNNDQ 293
           RA+AY+F+HQQTWKNSSK +NP FMDP NP WGWSWLERWMAARPWESRSA EKE N D 
Sbjct: 238 RALAYAFSHQQTWKNSSKPANPTFMDPNNPHWGWSWLERWMAARPWESRSAMEKELNTDH 297

Query: 294 SSVKS-ANRSIVAGEISKSFARYQLNSDKLSPTTNQKISKTPKHQSPSTPTKSA--SSTV 350
           +S+KS  +R+   GEISK++AR  LN DK    T QK S+ P  QSPSTP   A  SS+V
Sbjct: 298 ASLKSTTSRAFSIGEISKAYARRDLNLDKKPSPTAQKPSRPPSRQSPSTPPSKAQSSSSV 357

Query: 351 AKKTKPASPRGSVSGLDDDSRSMVSVQS--YRRHSIAGSSVRDDESLPTSPSAPRYMVPT 408
             KTKPASP+GS  G DDDSRSM+S+QS  YRRHSIAGS VRDDESL +SP+ P YM  T
Sbjct: 358 TGKTKPASPKGSGWGADDDSRSMLSIQSERYRRHSIAGSLVRDDESLASSPAVPSYMAST 417

Query: 409 ESAKAKSRLQSPLGVDKNGTPEKATLASAKKRLAYPPSPARPRRHSGPPKLESS 462
           ES +A+SRL SPLG++KNGTPEKA+ +SAKKRL++P SPA PRRHSGPP++E+S
Sbjct: 418 ESTRARSRLPSPLGLEKNGTPEKASGSSAKKRLSFPASPAGPRRHSGPPRVETS 471

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356537501|ref|XP_003537265.1| PREDICTED: protein IQ-DOMAIN 1-like [Glycine max]

 Score =  528 bits (1360), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 305/484 (63%), Positives = 362/484 (74%), Gaps = 25/484 (5%)

Query: 1   MGKKGK-WFASVKNAFSPESKEKKDK---KSKKKWFGKQKEEGSNSAPLETVKTTLPPPA 56
           MG+KG  WF++VK A SPE KEK D+   +SKKKWF KQK + S S       T+    A
Sbjct: 1   MGRKGNSWFSTVKKALSPEPKEKNDQNSSRSKKKWFQKQKLQTSES-------TSQSDNA 53

Query: 57  PPLQPEEVEITVAENELSNHVANEEVITAVPAMAAVSADQSVT-EVRIVTNTRFAGKSKE 115
           PPL   E+ +T  E+E+ NH    EV TAV A   V A Q+   EV+  T  +F  K  E
Sbjct: 54  PPLPLPEIILTHVESEI-NH-DRVEVATAVDAEEPVLAVQTAAAEVQATTIVQFDNKPTE 111

Query: 116 EAAAIRIQTAFRGYLARRALRALRGLVRLKLLMEGPVVKRQAANTLRCMQTLSRLQSQIR 175
           E AAIRIQ AFRGYLARRALRALRGLVRL+ LMEGPVVKRQA +TLR MQT + LQ+QIR
Sbjct: 112 EMAAIRIQKAFRGYLARRALRALRGLVRLRSLMEGPVVKRQAISTLRSMQTFAHLQTQIR 171

Query: 176 SRRVRMSEENQALQRQLLQKHAKEL-AMQMGEEWDDSIQSKEQVEANLLSKYEATMRRER 234
           SRR+RM EENQALQ+QLLQKHAKEL +M++GEEWDDS+QSKEQVEA LLSKYEA+MRRER
Sbjct: 172 SRRLRMLEENQALQKQLLQKHAKELESMRLGEEWDDSVQSKEQVEAKLLSKYEASMRRER 231

Query: 235 AMAYSFTHQQTWKNSSKSSNPMFMDPRNPTWGWSWLERWMAARPWESRSATEKEPNNDQS 294
           AMAYSF+HQ  WKN+S+S NPMFMDP NP WGWSWLERW AARPWES S  EKE N ++ 
Sbjct: 232 AMAYSFSHQHNWKNASRSINPMFMDPTNPAWGWSWLERWTAARPWESHSQMEKEKNGNK- 290

Query: 295 SVKSANRSIVAGEISKSFARYQLNSDKLSPTTNQKISKTPKH----QSPSTPTKSASSTV 350
           S++S++R I + EISK+FA++QLNS+K SPT +Q    +P      QS S P K  S  V
Sbjct: 291 SLRSSSRGITSAEISKAFAKFQLNSEKHSPTASQNPG-SPNFESHSQSHSNPPKPPSPAV 349

Query: 351 AKKTKPASPRGSVSGLDDDSRSMVSVQSY--RRHSIAGSSVRDDESLPTSPSAPRYMVPT 408
           AKK K ASP+  +  +DDD++SM+SVQS   RRHSIAGS V DDESL +SPS P YMVPT
Sbjct: 350 AKKLKKASPK-DILAIDDDTKSMISVQSERPRRHSIAGSIVGDDESLASSPSIPSYMVPT 408

Query: 409 ESAKAKSRLQSPLGVDKNGTPEKATLASAKKRLAYPPSPARPRRHSGPPKLESSINLEIS 468
           +SAKAKSR+QSPL  +  GTPEK +  +AKKRL++P SPARPRRHSGPPK+ESS N EI+
Sbjct: 409 KSAKAKSRMQSPLAAE-YGTPEKGSSGTAKKRLSFPASPARPRRHSGPPKVESSFNAEIT 467

Query: 469 VTNG 472
           V NG
Sbjct: 468 VGNG 471

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147809623|emb|CAN66644.1| hypothetical protein VITISV_018782 [Vitis vinifera]

 Score =  526 bits (1354), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 300/474 (63%), Positives = 353/474 (74%), Gaps = 15/474 (3%)

Query: 1   MGKKGKWFASVKNAFSPESKEKKDK---KSKKKWFGKQKEEGSNSAPLETVKTTLPPPAP 57
           MGKKG WF++VK A SPE KEKKDK   KSKKKWFGK K     S+  E         AP
Sbjct: 1   MGKKGNWFSAVKKALSPEPKEKKDKTTPKSKKKWFGKHKNLDPVSSSTENAMPLP---AP 57

Query: 58  PLQPEEVEITVAENELSNHV-ANEEVITAVPAMAAVSADQSVTEVRIVTNTRFAGKSKEE 116
               E+V++T AENE S H  +           A  +A  +   VR+ T TRF+GKSKEE
Sbjct: 58  APPIEDVKLTEAENEQSKHAYSVALATAVAAEAAVAAAHAAAEVVRLTTVTRFSGKSKEE 117

Query: 117 AAAIRIQTAFRGYLARRALRALRGLVRLKLLMEGPVVKRQAANTLRCMQTLSRLQSQIRS 176
            AAI+IQTAFRGYLARRALRALRGLVRLK L++G  VKRQA  TLRCMQTL+R+QSQIR+
Sbjct: 118 VAAIKIQTAFRGYLARRALRALRGLVRLKSLIQGQSVKRQATTTLRCMQTLARVQSQIRA 177

Query: 177 RRVRMSEENQALQRQLLQKHAKELA---MQMGEEWDDSIQSKEQVEANLLSKYEATMRRE 233
           RR+RMSEEN ALQRQL  K  KEL      +G++WDDS+QSKEQ+EANL SK EA +RRE
Sbjct: 178 RRIRMSEENLALQRQLQLKRDKELEKLRASIGDDWDDSVQSKEQIEANLQSKQEAAVRRE 237

Query: 234 RAMAYSFTHQQTWKNSSKSSNPMFMDPRNPTWGWSWLERWMAARPWESRSATEKEPNNDQ 293
           RA+AY+F+HQQTWKNSSK +NP FMDP NP WGWSWLERWMAARPWESRSA EKE N D 
Sbjct: 238 RALAYAFSHQQTWKNSSKPANPTFMDPNNPHWGWSWLERWMAARPWESRSAMEKELNTDH 297

Query: 294 SSVKS-ANRSIVAGEISKSFARYQLNSDKLSPTTNQKISKTPKHQSPSTPTKSA--SSTV 350
           +S+KS  +R+   GEISK++AR  LN DK    T QK S+ P  QSPSTP   A  SS+V
Sbjct: 298 ASLKSTTSRAFSIGEISKAYARRDLNLDKKPSPTAQKPSRPPSRQSPSTPPSKAQSSSSV 357

Query: 351 AKKTKPASPRGSVSGLDDDSRSMVSVQS--YRRHSIAGSSVRDDESLPTSPSAPRYMVPT 408
             KT+PASP+GS  G DDDSRSM+S+QS  YRRHSIAGS VRDDESL +SP+ P YM  T
Sbjct: 358 TGKTRPASPKGSGWGADDDSRSMLSIQSEWYRRHSIAGSLVRDDESLASSPAVPSYMAST 417

Query: 409 ESAKAKSRLQSPLGVDKNGTPEKATLASAKKRLAYPPSPARPRRHSGPPKLESS 462
           ES +A+SRL SPLG++KNGTPEKA+ +SAKKRL++P SPA PRRHSGPP++E+S
Sbjct: 418 ESTRARSRLPSPLGLEKNGTPEKASGSSAKKRLSFPASPAGPRRHSGPPRVETS 471

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356572413|ref|XP_003554363.1| PREDICTED: protein IQ-DOMAIN 1-like [Glycine max]

 Score =  511 bits (1315), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 320/483 (66%), Positives = 376/483 (77%), Gaps = 20/483 (4%)

Query: 1   MGKKGKWFASVKNAFSPESKEKKDKKSKKK---WFGKQKEEGSNSAPLETVKTTLPPPAP 57
           MG+KG WF+SVK A SP+SKEKKD+KS K    WFGKQK E S S          PPP P
Sbjct: 1   MGRKGNWFSSVKKALSPDSKEKKDQKSSKSKKKWFGKQKFETSVS--YSEADKAPPPPPP 58

Query: 58  PLQPEEVEITVAENELS-NHVANEEVITAVPAMAAVSADQSVTEVRI--VTNTRFAGKSK 114
              PEE+++T  E+E+S +H    EV TA+ A   V + Q +  VR+       FAGK K
Sbjct: 59  IPPPEEIKLTDIEHEISHDHDQVVEVATAMDAEELVPSVQ-IEPVRVEAALIAHFAGKPK 117

Query: 115 EEAAAIRIQTAFRGYLARRALRALRGLVRLKLLMEGPVVKRQAANTLRCMQTLSRLQSQI 174
           +E AAI+IQTAFRGYLARRALRALRGLVRLKLLMEGPVVKRQA +TLR MQTLSRLQSQI
Sbjct: 118 DEVAAIKIQTAFRGYLARRALRALRGLVRLKLLMEGPVVKRQATSTLRSMQTLSRLQSQI 177

Query: 175 RSRRVRMSEENQALQRQLLQKHAKEL-AMQMGEEWDDSIQSKEQVEANLLSKYEATMRRE 233
           RSRR+RM EENQALQRQLLQKHA+EL +++MGEEWDDS+QSKEQ+EA LLSKYEATMRRE
Sbjct: 178 RSRRIRMLEENQALQRQLLQKHARELESLRMGEEWDDSLQSKEQIEAKLLSKYEATMRRE 237

Query: 234 RAMAYSFTHQQTWKNSSKSSNPMFMDPRNPTWGWSWLERWMAARPWESRSATEKEPNNDQ 293
           RA+AY+FTHQQ WKNSS+S NPMFMDP NP+WGWSWLERWMAARPWESRS  +KE  ND 
Sbjct: 238 RALAYAFTHQQNWKNSSRSVNPMFMDPTNPSWGWSWLERWMAARPWESRSHMDKE-LNDH 296

Query: 294 SSVKSANRSIVAGEISKSFARYQLNSDKLSPTTNQKISKTPKHQSPSTPTKSASSTVAKK 353
           SS++S++RSI  GEISKSFAR+QLNS+K SPT +Q    +P  Q  STP+K ASS+  K 
Sbjct: 297 SSIRSSSRSITGGEISKSFARFQLNSEKHSPTASQNPG-SPSFQ--STPSKPASSSAKKP 353

Query: 354 TKPA-SPRGSVSGLDDDSRSMVSVQS--YRRHSIAGSSVRDDESLPTSPSAPRYMVPTES 410
            K + SPRGS   +D+DS+S+VSV S  +RRHSIAGSSVRDDESL +SP+ P YMVPT+S
Sbjct: 354 KKVSPSPRGSWV-MDEDSKSLVSVHSDRFRRHSIAGSSVRDDESLASSPAVPSYMVPTQS 412

Query: 411 AKAKSRLQSPLGVDKNGTPEKATLASAKKRLAYPPSPARPRRHSGPPKLE-SSINLEISV 469
           AKAKSR QSPL   +N   EK +  SAKKRL++P SPARPRRHSGPPK+E SS+N E++V
Sbjct: 413 AKAKSRTQSPLA-SENAKAEKGSFGSAKKRLSFPASPARPRRHSGPPKVESSSLNAELAV 471

Query: 470 TNG 472
             G
Sbjct: 472 DKG 474

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	474
TAIR|locus:2143503	461	iqd2 "AT5G03040" [Arabidopsis	0.949	0.976	0.466	7.8e-94
TAIR|locus:2100504	430	IQD3 "AT3G52290" [Arabidopsis	0.563	0.620	0.425	4.2e-69
TAIR|locus:2066226	527	Iqd4 "AT2G26410" [Arabidopsis	0.776	0.698	0.310	1e-36
TAIR|locus:2057459	416	IQD6 "AT2G26180" [Arabidopsis	0.352	0.401	0.357	1.1e-28
TAIR|locus:2090409	422	IQD5 "AT3G22190" [Arabidopsis	0.443	0.497	0.355	3.9e-28
TAIR|locus:2043959	669	IQD14 "AT2G43680" [Arabidopsis	0.434	0.307	0.285	1.1e-24
TAIR|locus:2055430	263	iqd9 "AT2G33990" [Arabidopsis	0.390	0.703	0.329	2.9e-23
TAIR|locus:2097478	517	IQD13 "AT3G59690" [Arabidopsis	0.525	0.481	0.275	4.2e-23
TAIR|locus:2086385	259	IQD10 "AT3G15050" [Arabidopsis	0.390	0.714	0.302	4.1e-19
TAIR|locus:2134628	534	iqd17 "AT4G00820" [Arabidopsis	0.845	0.750	0.230	4.5e-19

TAIR|locus:2143503 iqd2 "AT5G03040" [Arabidopsis thaliana (taxid:3702)]

 Score = 934 (333.8 bits), Expect = 7.8e-94, P = 7.8e-94
 Identities = 225/482 (46%), Positives = 269/482 (55%)

Query:     1 MGKKGKWFASVKNAFXXXXXXXXXXXXXXXXXXXXXXXGSNSAPLETVKTTXXXXXXXXX 60
             MGKK KWF+SVK AF                        SN   ++ V+ +         
Sbjct:     1 MGKKAKWFSSVKKAFSPDSKKSKQKLAEGQNGVI-----SNPPVVDNVRQSSSSPPPALA 55

Query:    61 XEEV---EITVAEN-ELSNHVANEEVITAVPAMAAVSADQSVTEVRIVTNTRFAGKSKEE 116
               EV   E+ V  N +LS     + V      +  V +  +   VR  T TRFAGKS EE
Sbjct:    56 PREVRVAEVIVERNRDLSPPSTADAVNVTATDVPVVPSSSAPGVVRRATPTRFAGKSNEE 115

Query:   117 AAAIRIQTAFRGYXXXXXXXXXXXXXXXXXXMEGPVVKRQAANTLRCMXXXXXXXXXXXX 176
             AAAI IQT FRGY                  MEG VVKRQAANTL+CM            
Sbjct:   116 AAAILIQTIFRGYLARRALRAMRGLVRLKLLMEGSVVKRQAANTLKCMQTLSRVQSQIRA 175

Query:   177 XXXXMSEENQALQRQLLQKHAKELA-MQMGEEWDDSIQSKEQVEANLLSKYEATMRRERA 235
                 MSEENQA Q+QLLQKHAKELA ++ G+ W+DSIQSKE+VEANLLSKYEATMRRERA
Sbjct:   176 RRIRMSEENQARQKQLLQKHAKELAGLKNGDNWNDSIQSKEKVEANLLSKYEATMRRERA 235

Query:   236 MAYSFTHQQTWKNSSKSSNPMFMDPRNPTWGWSWLERWMAARPWESRSATEKEPNNDQSS 295
             +AYS++HQQ WKN+SKS NPMFMDP NPTWGWSWLERWMA RP ES    +   NND ++
Sbjct:   236 LAYSYSHQQNWKNNSKSGNPMFMDPSNPTWGWSWLERWMAGRPLESSEKEQSNSNNDNAA 295

Query:   296 VKSANRSIVAGEISKSFARYQLNSDKLSPTTNQKISKTPKHQXXXXXXXXXXXXXXXXXX 355
               S   SI   E +KS  R    +    P T      TP+++                  
Sbjct:   296 --SVKGSINRNEAAKSLTR----NGSTQPNTPSSARGTPRNKNSFFSPPTPSRLN----- 344

Query:   356 XXXPRGSVSGLDDDSRSMVSVQSYR--RHSIAGSSVRDDESLPTSPSAPRYMVPTESAKA 413
                 + S    DDDS+S +SV S R  RHSIAGSSVRDDESL  SP+ P YMVPT+SA+A
Sbjct:   345 ----QSSRKSNDDDSKSTISVLSERNRRHSIAGSSVRDDESLAGSPALPSYMVPTKSARA 400

Query:   414 KSRLQSPLGVDKNGTPEKATLASAKKRLAYPPSPA--RPRRHSGPPKLESSINLEISVTN 471
             + + QSPLG            ASAKKRL+YP SPA  +PRR S PPK+ES     ++VTN
Sbjct:   401 RLKPQSPLGGTTQENEGFTDKASAKKRLSYPTSPALPKPRRFSAPPKVESG---GVTVTN 457

Query:   472 GS 473
             G+
Sbjct:   458 GA 459

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

GO:0006007 "glucose catabolic process" evidence=RCA

GO:0048767 "root hair elongation" evidence=RCA

TAIR|locus:2100504 IQD3 "AT3G52290" [Arabidopsis thaliana (taxid:3702)]

 Score = 535 (193.4 bits), Expect = 4.2e-69, Sum P(2) = 4.2e-69
 Identities = 117/275 (42%), Positives = 161/275 (58%)

Query:    62 EEVEITVAENELSNHVANEEVITAVPAMAAVSADQSVTEV-RIVTNTRFAGKSKEEAAAI 120
             ++ ++   E + S H  +  + TA  A AAV+A Q+  EV R+   +RF GKS EE AAI
Sbjct:    53 KDAKLKEIEEQQSRHAYSVAIATAAAAEAAVAAAQAAAEVVRLSALSRFPGKSMEEIAAI 112

Query:   121 RIQTAFRGYXXXXXXXXXXXXXXXXXXMEGPVVKRQAANTLRCMXXXXXXXXXXXXXXXX 180
             +IQTAFRGY                  ++G  V+RQA +TL+ M                
Sbjct:   113 KIQTAFRGYMARRALRALRGLVRLKSLVQGKCVRRQATSTLQSMQTLARVQYQIRERRLR 172

Query:   181 MSEENQALQRQLLQKHAKELAMQMGEEWDDSIQSKEQVEANLLSKYEATMRRERAMAYSF 240
             +SE+ QAL RQL QKH K+   + GE W+DS  S+E+VEAN+L+K  ATMRRE+A+AY+F
Sbjct:   173 LSEDKQALTRQLQQKHNKDFD-KTGENWNDSTLSREKVEANMLNKQVATMRREKALAYAF 231

Query:   241 THQQTWKNSSKSSNPMFMDPRNPTWGWSWLERWMAARPWESRSATEKEPNNDQSSVKSAN 300
             +HQ TWKNS+K  +  FMDP NP WGWSWLERWMAARP E+ S T   P+N +    S+ 
Sbjct:   232 SHQNTWKNSTKMGSQTFMDPNNPHWGWSWLERWMAARPNENHSLT---PDNAEKD--SSA 286

Query:   301 RSIVAGEISKSFARYQLNSDKLSPTTNQKISKTPK 335
             RS+ +  +S+   R + N      T N +   +P+
Sbjct:   287 RSVASRAMSEMIPRGK-NLSPRGKTPNSRRGSSPR 320

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2066226 Iqd4 "AT2G26410" [Arabidopsis thaliana (taxid:3702)]

 Score = 395 (144.1 bits), Expect = 1.0e-36, P = 1.0e-36
 Identities = 124/399 (31%), Positives = 185/399 (46%)

Query:    84 TAVPAMAAVSADQSVTEV-RIVT-NTRFAGKSKEEAAAIRIQTAFRGYXXXXXXXXXXXX 141
             +AV A AAV A  +  EV R+ T +T    +SKEE AAI+IQ A+R Y            
Sbjct:   114 SAVAAEAAVVAAHAAAEVIRLTTPSTPQIEESKEETAAIKIQNAYRCYTARRTLRALRGM 173

Query:   142 XXXXXXMEGPVVKRQAANTLRCMXXXXXXXXXXXXXXXXMSEENQALQRQLLQK-HAKEL 200
                   ++G  VKRQ    L  M                +S EN+   R + QK H KE 
Sbjct:   174 ARLKSLLQGKYVKRQMNAMLSSMQTLTRLQTQIQERRNRLSAENKTRHRLIQQKGHQKEN 233

Query:   201 AMQM--GEEWDDSIQSKEQVEANLLSKYEATMRRERAMAYSFTHQQTWKNSSKSSNPMFM 258
                +     +D S +SKEQ+ A  +++ EA++RRERA+AY+++HQQTW+NSSK  +   M
Sbjct:   234 HQNLVTAGNFDSSNKSKEQIVARSVNRKEASVRRERALAYAYSHQQTWRNSSKLPHQTLM 293

Query:   259 DPRNPTWGWSWLERWMAARPWESRSATE----KEPNNDQSSVKSAN-RSIVAGEISKSFA 313
             D     WGWSWLERWMA+RPW++ S  +    K     ++S+KS+  RS      S+S  
Sbjct:   294 DTNTTDWGWSWLERWMASRPWDAESIDDQVSVKSSLKRENSIKSSPARSKTQKSASQSSI 353

Query:   314 RYQLNSDKLSPTTNQKISKTPKHQXXXXXXXXXXXXXXXXXXXXXPRGSVSGLDDDSRSM 373
             ++ +N+D    T ++KI  T +                        R S+       +S 
Sbjct:   354 QWPVNND----TKSRKIEVTNRRHSIGGGSSENAKDDESVGSSSSRRNSLDNTQT-VKSK 408

Query:   374 VSVQSYRRHSIAGS-----SVRDDESLP-TSPSAPRYMVPTESAKAKSR-LQSPLGVDKN 426
             VSV++    S A +     +V    +L  T     +  V T    A +  ++S + V   
Sbjct:   409 VSVETTSNVSNAQTVKPKANVGAKRNLDNTKTLKSKSSVGTTGNLANTEAVKSKVNVGTT 468

Query:   427 GTPEKATLASAKKRLAYPPSPARPRRHSGPPKLESSINL 465
               P+K  +A  KK    PP    P++     +L SS +L
Sbjct:   469 SMPKKEVVADKKK----PPQMVLPKK-----RLSSSTSL 498

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

TAIR|locus:2057459 IQD6 "AT2G26180" [Arabidopsis thaliana (taxid:3702)]

 Score = 279 (103.3 bits), Expect = 1.1e-28, Sum P(3) = 1.1e-28
 Identities = 64/179 (35%), Positives = 96/179 (53%)

Query:   114 KEEAAAIRIQTAFRGYXXXXXXXXXXXXXXXXXXMEGPVVKRQAANTLRCMXXXXXXXXX 173
             +EE AAIRIQTAFRG+                  + G  V++QAA TLRCM         
Sbjct:    82 REEWAAIRIQTAFRGFLARRALRALKGIVRLQALVRGRQVRKQAAVTLRCMQALVRVQAR 141

Query:   174 XXXXXXXMSEENQALQRQLLQKHA--KELAMQMGEEWDDSIQSKEQVEANLLSKYEATMR 231
                    M+ E QA+Q+ LL +H    +L  ++ E W D   + + +++ L  + E   +
Sbjct:   142 VRARRVRMTVEGQAVQK-LLDEHRTKSDLLKEVEEGWCDRKGTVDDIKSKLQQRQEGAFK 200

Query:   232 RERAMAYSFTHQQTWKNSSKS-----SNPMFMDPRN---PTWGWSWLERWMAARPWESR 282
             RERA+AY+   +Q W++++ S     S+  ++  +     +WGWSWLERWMAARPWE+R
Sbjct:   201 RERALAYALAQKQ-WRSTTSSNLKTNSSISYLKSQEFDKNSWGWSWLERWMAARPWETR 258

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

TAIR|locus:2090409 IQD5 "AT3G22190" [Arabidopsis thaliana (taxid:3702)]

 Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
 Identities = 80/225 (35%), Positives = 117/225 (52%)

Query:   112 KSKEEAAAIRIQTAFRGYXXXXXXXXXXXXXXXXXXMEGPVVKRQAANTLRCMXXXXXXX 171
             +S+E  AA RIQTA+RG+                  + G  V++QAA TLRCM       
Sbjct:    84 QSRENRAATRIQTAYRGFLARRALRALKGLVRLQALVRGHAVRKQAAVTLRCMQALVRVQ 143

Query:   172 XXXXXXXXXMS-E-ENQALQRQLLQKHAKELAMQMGEE-WDDSIQSKEQVEANLLSKYEA 228
                      ++ E E++  Q+ L Q+ A E  ++  EE W DSI S EQ++A LL + EA
Sbjct:   144 ARVRARRVRLALELESETSQQTLQQQLADEARVREIEEGWCDSIGSVEQIQAKLLKRQEA 203

Query:   229 TMRRERAMAYSFTHQQTWKNSSK--SSNPMFMDPRNPTWGWSWLERWMAARPWESRSATE 286
               +RERAMAY+ THQ  W+  ++  S++  F   +N  WGW+WLERWMA RPWE+R    
Sbjct:   204 AAKRERAMAYALTHQ--WQAGTRLLSAHSGFQPDKN-NWGWNWLERWMAVRPWENRFLD- 259

Query:   287 KEPNNDQSSVKSANRSIVAGEISKSFARYQLNSDKLSPTTNQKIS 331
                +N +   K     +   E S++  + Q+ S    P T+  +S
Sbjct:   260 ---SNLRDDAKLGENGM---EQSENVPKTQIKSVSKMPNTSNLVS 298

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2043959 IQD14 "AT2G43680" [Arabidopsis thaliana (taxid:3702)]

 Score = 214 (80.4 bits), Expect = 1.1e-24, Sum P(3) = 1.1e-24
 Identities = 64/224 (28%), Positives = 106/224 (47%)

Query:   115 EEAAAIRIQTAFRGYXXXXXXXXXXXXXXXXXXMEGPVVKRQAANTLRCMXXXXXXXXXX 174
             + A+A +IQ AFRGY                  + G  VKRQ  N ++ M          
Sbjct:   322 QHASATKIQGAFRGYMARKSFRALKGLVRLQGVVRGYSVKRQTINAMKYMQQVVRVQSQI 381

Query:   175 XXXXXXMSEENQALQRQLLQKHAKELAMQMGEE-WDDSIQSKEQVEANLLSKYEATMRRE 233
                   M E NQA   Q+ +  AK  A + G + WDDS+ +KE+ ++    K +A ++RE
Sbjct:   382 QSRRIKMLE-NQA---QVEKDEAKWAASEAGNDNWDDSVLTKEERDSRSQRKTDAIIKRE 437

Query:   234 RAMAYSFTHQQTWKNSSKSSNPMFMDPRN-PTWGWSWLERWMAARPWESRSATEKEPNND 292
             R+MAY+++ ++ WKNS KS+     D R+ P W W+W++R     P  S + +  +P  D
Sbjct:   438 RSMAYAYS-RKLWKNSPKSTQ----DNRSFPQW-WNWVDR---QNPLASPAPSYSQPQRD 488

Query:   293 QSSVKSANRSIVAGEISKSFARYQLNSDKLSPTTNQKISKTPKH 336
                  S    +    +S+S  ++ +  D    T+  + S++  H
Sbjct:   489 FRLTPSR---LCPSPLSQSSKQHHIRLDNHFDTSTPRSSRSTFH 529

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2055430 iqd9 "AT2G33990" [Arabidopsis thaliana (taxid:3702)]

 Score = 268 (99.4 bits), Expect = 2.9e-23, P = 2.9e-23
 Identities = 64/194 (32%), Positives = 99/194 (51%)

Query:   115 EEAAAIRIQTAFRGYXXXXXXXXXXXXXXXXXXMEGPVVKRQAANTLRCMXXXXXXXXXX 174
             E+ AA RIQTAF+ Y                   E   VK QA  TLR +          
Sbjct:    46 EDWAATRIQTAFKAYKARKSLRRLKGIARAKLSTEKQSVKNQAVVTLRYLHSWSKIQSEI 105

Query:   175 XXXXXXMSEENQALQRQLLQKHAKELAMQMGE---EWDDSIQSKEQVEANLLSKYEATMR 231
                   M  E +   ++L  +H ++L  ++ +   EW+   ++K+++   +L + EAT++
Sbjct:   106 KARRVCMVTEWRLKNKRL--EHQQKLEAKLHDVEVEWNGGSETKDEILERILQREEATIK 163

Query:   232 RERAMAYSFTHQQTWKNSSKSSNPMFMDPRNPTWGWSWLERWMAARPWESR-SATEKEPN 290
             RERA+AY+F+HQ  WK   K+      +  N  WGWSW ERW++ARPWE R S T K+P 
Sbjct:   164 RERALAYAFSHQ--WKADGKTQWLGSYELGNTNWGWSWKERWISARPWEVRYSVTPKKPK 221

Query:   291 NDQSSVKS-ANRSI 303
             + ++   S A R++
Sbjct:   222 SSKTDSNSPAKRTV 235

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

GO:0000394 "RNA splicing, via endonucleolytic cleavage and ligation" evidence=RCA

GO:0009086 "methionine biosynthetic process" evidence=RCA

GO:0048573 "photoperiodism, flowering" evidence=RCA

TAIR|locus:2097478 IQD13 "AT3G59690" [Arabidopsis thaliana (taxid:3702)]

 Score = 216 (81.1 bits), Expect = 4.2e-23, Sum P(3) = 4.2e-23
 Identities = 74/269 (27%), Positives = 122/269 (45%)

Query:    73 LSNHVANEEVITAVPAMAAVSADQSVTEVRIVTNTRFAGKSK-----EEAAAIRIQTAFR 127
             +S  VA  +V    P      + ++V+  RIV    F  + +     + A AI+IQ AFR
Sbjct:   122 ISPRVAYPQVHYPKPPSPKPPSPRAVSP-RIVQRREFVHRPEPSLLVKNAYAIKIQAAFR 180

Query:   128 GYXXXXXXXXXXXXXXXXXXMEGPVVKRQAANTLRCMXXXXXXXXXXXXXXXXMSEENQA 187
             GY                  + G  VKRQ  N ++ M                M E N+A
Sbjct:   181 GYMARRSFRALKGLVRLQGVVRGHSVKRQTMNAMKYMQLLVRVQTQVQSRRIQMLE-NRA 239

Query:   188 LQRQLLQKHAKELAMQMGEEWDDSIQSKEQVEANLLSKYEATMRRERAMAYSFTHQQTWK 247
                +      K ++ +M ++WDDS+ +KE+ +  L  K +A ++RER+MAY+++HQ  WK
Sbjct:   240 RNDK---DDTKLVSSRMSDDWDDSVLTKEEKDVRLHRKIDAMIKRERSMAYAYSHQ-LWK 295

Query:   248 NSSKSSNPMFMDPRNPTWGWSWLERWMAA-RPWESRSATEKEPNNDQSSVKSANRSIVAG 306
             NS KS+  +      P W W+W++R     +P+     T   P+      +S+N++    
Sbjct:   296 NSPKSAQDI-RTSGFPLW-WNWVDRQKNQNQPFR---LTPTRPSLSPQP-QSSNQNHF-- 347

Query:   307 EISKSFARYQLNSDKLSPTTNQKISKTPK 335
              ++ SF     NS K +  T  +   TP+
Sbjct:   348 RLNNSFDTSTPNSSKSTFVTPSRPIHTPQ 376

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0005886 "plasma membrane" evidence=IDA

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

TAIR|locus:2086385 IQD10 "AT3G15050" [Arabidopsis thaliana (taxid:3702)]

 Score = 232 (86.7 bits), Expect = 4.1e-19, P = 4.1e-19
 Identities = 58/192 (30%), Positives = 93/192 (48%)

Query:    96 QSVTEVRIVTNTRFAG-KSKEEAAAIRIQTAFRGYXXXXXXXXXXXXXXXXXXMEGPVVK 154
             ++   V+ V ++  A  K   E A IRIQ AFR +                  ++G  V 
Sbjct:    29 ETSNRVKPVESSSAASTKLTVEVAVIRIQKAFRAFKARKRLCSLKSARRFNSLIQGHTVM 88

Query:   155 RQAANTLRCMXXXXXXXXXXXXXXXXMSEENQALQRQLLQKHAK-ELAM-QMGEEWDDSI 212
              Q +  L  +                M  + + LQ + L+   K E+ + ++  EW    
Sbjct:    89 NQTSTALNVIHSWYDIQNQIRARRLYMVTQGR-LQHKRLENRLKLEIKLHELEVEWCGGS 147

Query:   213 QSKEQVEANLLSKYEATMRRERAMAYSFTHQQTWK-NSSKSSNPMFMDPRNPTWGWSWLE 271
             ++ E++ A +  K EAT++RERAMAY+F+HQ  W+ N+++       +    +WGWSW E
Sbjct:   148 ETMEEILAKIQQKEEATVKRERAMAYAFSHQ--WRANATQYLGQASFNLGKESWGWSWKE 205

Query:   272 RWMAARPWESRS 283
             RW+AARPWE R+
Sbjct:   206 RWIAARPWEIRA 217

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

TAIR|locus:2134628 iqd17 "AT4G00820" [Arabidopsis thaliana (taxid:3702)]

 Score = 251 (93.4 bits), Expect = 4.5e-19, Sum P(2) = 4.5e-19
 Identities = 99/429 (23%), Positives = 169/429 (39%)

Query:    48 VKTTXXXXXXXXXXEEVEITVAENELSNHVANEEVITAVP--AMAAVSADQSVTEVRIVT 105
             VKT+               T+    + + V  +    + P   ++A S     +  + + 
Sbjct:    61 VKTSGVGKDAPAQKSTETTTIINPTVLSSVTEQRYDASTPPATVSAASETHPPSTTKELP 120

Query:   106 N-TRFAGKSKEEAAAIRIQTAFRGYXXXXXXXXXXXXXXXXXXMEGPVVKRQAANTLRCM 164
             N TR    ++E+ AA+ IQT FRGY                  + G  V++QA  TLRCM
Sbjct:   121 NLTRRTYTAREDYAAVVIQTGFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCM 180

Query:   165 XXXXXXXXXXXXXXXXMSEENQ----------ALQRQLLQKHAKELAMQ-----MGEEWD 209
                             +S +             L+ + LQ+ +   +M      + E+WD
Sbjct:   181 QALVRVQSRVLDQRKRLSHDGSRKSAFSDTQSVLESRYLQEISDRRSMSREGSSIAEDWD 240

Query:   210 DSIQSKEQVEANLLSKYEATMRRERAMAYSFTHQ-QTWKNSSKSSNPMFMDPRNPTWGWS 268
             D   + E+V+A L  + +  +RRE   + S     Q  +     S     +   P     
Sbjct:   241 DRPHTIEEVKAMLQQRRDNALRRESNNSISQAFSHQVRRTRGSYSTGDEYEEERP----K 296

Query:   269 WLERWMAARPWESRSATEKE--PNNDQSSVKSANRSIVAGEISKSFARYQLNSDKLSPTT 326
             WL+RWMA++PW+ R++T++   P      + ++   +  G  S++ A    +    SP+ 
Sbjct:   297 WLDRWMASKPWDKRASTDQRVPPVYKTVEIDTSQPYLTRGN-SRTGASPSRSQRPSSPSR 355

Query:   327 NQKISKTPKHQXXXXXXXXXXXXXXXXXXXXXPRGSVSGLDDDSRSMVSVQSYRRHSIAG 386
                  +                           R   S  +  S +     +Y   + +G
Sbjct:   356 TSHHYQQHNFSSATPSPAKSRPIQIRSASPRIQRDDRSAYNYTSNTPSLRSNYSFTARSG 415

Query:   387 SSVRDDESLPTSPSAPRYMVPTESAKAKSRLQSPLGVDKNGTPEKATLASAKKRLAYPPS 446
              SV    +  T+ + P YM  TESAKA+ R QS     +  TPEK  ++SA+KRL++P  
Sbjct:   416 YSVCTTTTTATNAALPNYMAITESAKARIRSQSAPR-QRPSTPEKERISSARKRLSFPVP 474

Query:   447 PARPRRHSG 455
             P  P++  G
Sbjct:   475 PL-PQQMDG 482

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00280137 hypothetical protein (480 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	474
pfam13178	105	pfam13178, DUF4005, Protein of unknown function (D	4e-08
smart00015	23	smart00015, IQ, Calmodulin-binding motif	1e-04
pfam00612	21	pfam00612, IQ, IQ calmodulin-binding motif	4e-04

>gnl|CDD|221960 pfam13178, DUF4005, Protein of unknown function (DUF4005)

 Score = 51.0 bits (122), Expect = 4e-08
 Identities = 35/86 (40%), Positives = 42/86 (48%), Gaps = 1/86 (1%)

Query: 370 SRSMVSVQSYRRHSIAGSSVRDDESLPTSPSAPRYMVPTESAKAKSRLQSPLGVDKNGTP 429
             S  S  S    S    S RDD S  +SPS P YM  TESAKAK R QS     +  T 
Sbjct: 6   LSSSSSKSSRSSPSNPTKSERDDNSSTSSPSLPNYMAATESAKAKVRSQSAP-RQRPETE 64

Query: 430 EKATLASAKKRLAYPPSPARPRRHSG 455
           E+ + +SA KRL+ P S +     S 
Sbjct: 65  ERESGSSATKRLSLPVSSSSGGSSSS 90

This is a C-terminal region of plant IQ-containing putative calmodulin-binding proteins. Length = 105

>gnl|CDD|197470 smart00015, IQ, Calmodulin-binding motif

 Score = 38.8 bits (92), Expect = 1e-04
 Identities = 12/23 (52%), Positives = 16/23 (69%)

Query: 114 KEEAAAIRIQTAFRGYLARRALR 136
           +   AAI IQ A+RGYLAR+  +
Sbjct: 1   RLTRAAIIIQAAWRGYLARKRYK 23

Short calmodulin-binding motif containing conserved Ile and Gln residues. Length = 23

>gnl|CDD|201341 pfam00612, IQ, IQ calmodulin-binding motif

 Score = 37.3 bits (88), Expect = 4e-04
 Identities = 12/21 (57%), Positives = 16/21 (76%)

Query: 116 EAAAIRIQTAFRGYLARRALR 136
             AAI+IQ A+RGYLAR+  +
Sbjct: 1   RKAAIKIQAAWRGYLARKRYK 21

Calmodulin-binding motif. Length = 21

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	474
PF13178	102	DUF4005: Protein of unknown function (DUF4005)	99.48
PF00612	21	IQ: IQ calmodulin-binding motif; InterPro: IPR0000	97.83
smart00015	26	IQ Short calmodulin-binding motif containing conse	97.29
KOG0160	862	consensus Myosin class V heavy chain [Cytoskeleton	97.25
KOG0520	975	consensus Uncharacterized conserved protein, conta	96.39
PTZ00014	821	myosin-A; Provisional	95.36
KOG0160	862	consensus Myosin class V heavy chain [Cytoskeleton	94.57
COG5022	1463	Myosin heavy chain [Cytoskeleton]	90.87
KOG0520	975	consensus Uncharacterized conserved protein, conta	89.64
KOG2128	1401	consensus Ras GTPase-activating protein family - I	88.36
PF00612	21	IQ: IQ calmodulin-binding motif; InterPro: IPR0000	88.29
KOG0164	1001	consensus Myosin class I heavy chain [Cytoskeleton	87.36

>PF13178 DUF4005: Protein of unknown function (DUF4005)

Probab=99.48  E-value=4.7e-14  Score=122.29  Aligned_cols=57  Identities=47%  Similarity=0.611  Sum_probs=47.4

Q ss_pred             CCCCCccCccccccccccCCCCCCCCCCCCccccccccccccCCCCCCCCCcCCCCCC
Q 011955          401 APRYMVPTESAKAKSRLQSPLGVDKNGTPEKATLASAKKRLAYPPSPARPRRHSGPPK  458 (474)
Q Consensus       401 ~PsYMa~TeSAKAK~R~qs~pr~~~~~~pek~~~~~~kkRlS~p~s~~~~rr~s~~pk  458 (474)
                      +|||||+|||||||+|+||+|++ +++++|......++||||||.+.+.....+..|+
T Consensus        34 ~PsYMa~TeSakAK~RsqSaPrq-R~~~~~~~~~~~~~kR~S~~~~~~~~~~~~~~~~   90 (102)
T PF13178_consen   34 LPSYMAATESAKAKARSQSAPRQ-RPGTPERAEKQSSKKRLSLPGSSNSGSSSSRSPR   90 (102)
T ss_pred             CCCccchhhhhhhhhhccCCccc-CCCccccccccccccccccCCCCCCCcCCCCCCc
Confidence            89999999999999999999997 7777766544567999999987766666666665

>PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K

Probab=97.83  E-value=1.8e-05  Score=50.24  Aligned_cols=21  Identities=52%  Similarity=0.809  Sum_probs=19.0

Q ss_pred             HHHHHHHHHHhhhhHHHHHHH
Q 011955          116 EAAAIRIQTAFRGYLARRALR  136 (474)
Q Consensus       116 e~AAi~IQsafRGylARral~  136 (474)
                      ..|||.||+.||||++|+.|+
T Consensus         1 ~~aai~iQ~~~R~~~~Rk~~k   21 (21)
T PF00612_consen    1 RKAAIIIQSYWRGYLARKRYK   21 (21)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHhcC
Confidence            368999999999999999885

The IQ motif, which can be present in one or more copies, serves as a binding site for different EF-hand proteins including the essential and regulatory myosin light chains, calmodulin (CaM), and CaM-like proteins [, ].Many IQ motifs are protein kinase C (PKC) phosphorylation sites [, ]. Resolution of the 3D structure of scallop myosin has shown that the IQ motif forms a basic amphipathic helix []. Some proteins known to contain an IQ motif are listed below: A number of conventional and unconventional myosins. Neuromodulin (GAP-43). This protein is associated with nerve growth. It is a major component of the motile "growth cones" that form the tips of elongating axons. Neurogranin (NG/p17). Acts as a "third messenger" substrate of protein kinase C-mediated molecular cascades during synaptic development and remodeling. Sperm surface protein Sp17. Ras GTPase-activating-like protein IQGAP1. IQGAP1 contains 4 IQ motifs. This entry covers the entire IQ motif.; GO: 0005515 protein binding; PDB: 2DFS_A 2IX7_C 1OE9_A 1W7J_A 1W7I_A 1KQM_A 1KK7_A 1WDC_A 1DFL_A 1B7T_A ....

>smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues

Probab=97.29  E-value=0.00021  Score=47.48  Aligned_cols=22  Identities=55%  Similarity=0.776  Sum_probs=20.1

Q ss_pred             HHHHHHHHHHHhhhhHHHHHHH
Q 011955          115 EEAAAIRIQTAFRGYLARRALR  136 (474)
Q Consensus       115 ee~AAi~IQsafRGylARral~  136 (474)
                      .+.+|+.||+.||||++|+.|+
T Consensus         2 ~~~aa~~IQa~~Rg~~~r~~y~   23 (26)
T smart00015        2 LTRAAIIIQAAWRGYLARKRYK   23 (26)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhh
Confidence            5789999999999999999884

Calmodulin-binding motif.

>KOG0160 consensus Myosin class V heavy chain [Cytoskeleton]

Probab=97.25  E-value=0.0004  Score=79.35  Aligned_cols=64  Identities=28%  Similarity=0.358  Sum_probs=50.6

Q ss_pred             HHHHHHHHHHHhhhhHHHHHHHHh-hhHHHHhhhccCcccchhhhHHHHHHhHHHHHHHHHHHHHhhhh
Q 011955          115 EEAAAIRIQTAFRGYLARRALRAL-RGLVRLKLLMEGPVVKRQAANTLRCMQTLSRLQSQIRSRRVRMS  182 (474)
Q Consensus       115 ee~AAi~IQsafRGylARral~aL-kgiVrLQalvRG~~vRrqa~~tlr~~qA~vriQs~iR~rr~R~~  182 (474)
                      ...+++.||..||||+.|+.|..+ ++++.+|+++||.++|+.   ++ ...+++.+|..+|+...|+.
T Consensus       672 l~~~~~~iq~~~r~~~~r~~f~~~r~~~~~~Q~~~rG~~~r~~---~~-~~~aai~~q~~~r~~~~r~~  736 (862)
T KOG0160|consen  672 LSAAKVLIQRQIRGYLARKKFLQLRSAVIIIQAYSRGVLARRE---TE-REAAAIGIQKECRSYLNRRR  736 (862)
T ss_pred             HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHh---hH-HHHHHHHhHHHHHHHHHHHH
Confidence            455788899999999999999999 889999999999999981   12 55566666666666655543

>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]

Probab=96.39  E-value=0.0019  Score=74.52  Aligned_cols=72  Identities=25%  Similarity=0.356  Sum_probs=60.4

Q ss_pred             HHHHHHHHHHHHhhhhHHHHHHHHh-hhHHHHhhhccCcccchhhhHHH-------HHHhHHHHHHHHHHHHHhhhhhhh
Q 011955          114 KEEAAAIRIQTAFRGYLARRALRAL-RGLVRLKLLMEGPVVKRQAANTL-------RCMQTLSRLQSQIRSRRVRMSEEN  185 (474)
Q Consensus       114 ~ee~AAi~IQsafRGylARral~aL-kgiVrLQalvRG~~vRrqa~~tl-------r~~qA~vriQs~iR~rr~R~~~~~  185 (474)
                      ....||..||.-||||+.|+.|..+ .=+|+||+-|||+.+|+++....       +-+.++-++|+.+|+++.|...|.
T Consensus       808 ~~~~aa~~iq~~f~~yk~r~~~l~tr~p~v~iqa~~rg~q~r~dy~ki~wSv~~lek~~lrwR~k~~g~Rgfk~~~~~e~  887 (975)
T KOG0520|consen  808 SDPAAASRIQKKFRGYKQRKEFLSTRQPIVKIQAAVRGYQVRKDYRKITWSVGVLEKLILRWRRKGKGFRGFKGRALFEE  887 (975)
T ss_pred             cchhHHHHhhhhhhhHHhhhhhcccCCccccchhhhhchhHhhhhheechhhhHHHHHHHHHHHhhhhhcccccccchhc
Confidence            4567999999999999999999999 77999999999999999997332       245566778999999988876554

>PTZ00014 myosin-A; Provisional

Probab=95.36  E-value=0.011  Score=67.98  Aligned_cols=41  Identities=15%  Similarity=0.203  Sum_probs=36.8

Q ss_pred             HHHHHHHHHhhhhHHHHHHHHh-hhHHHHhhhccCcccchhh
Q 011955          117 AAAIRIQTAFRGYLARRALRAL-RGLVRLKLLMEGPVVKRQA  157 (474)
Q Consensus       117 ~AAi~IQsafRGylARral~aL-kgiVrLQalvRG~~vRrqa  157 (474)
                      ..++.||+++|||++|+.|..+ .++++||+.+||+++++..
T Consensus       778 ~~~~~iq~~~r~~~~r~~~~~~~~~~~~iQ~~~R~~l~~~~~  819 (821)
T PTZ00014        778 PLVSVLEALILKIKKKRKVRKNIKSLVRIQAHLRRHLVIAEI  819 (821)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            3688999999999999999998 8999999999999988764

>KOG0160 consensus Myosin class V heavy chain [Cytoskeleton]

Probab=94.57  E-value=0.051  Score=62.70  Aligned_cols=66  Identities=23%  Similarity=0.207  Sum_probs=55.7

Q ss_pred             HHHHHHHHHHHHhhhhHHHHHHHHhhhHHHHhhhccCcccchhhhHHHHHHhHHHHHHHHHHHHHhhhh
Q 011955          114 KEEAAAIRIQTAFRGYLARRALRALRGLVRLKLLMEGPVVKRQAANTLRCMQTLSRLQSQIRSRRVRMS  182 (474)
Q Consensus       114 ~ee~AAi~IQsafRGylARral~aLkgiVrLQalvRG~~vRrqa~~tlr~~qA~vriQs~iR~rr~R~~  182 (474)
                      ..-.+++.||..+||+++|+........+.+|..+|++..|+++   .....+++.+|+.+|+..+|..
T Consensus       694 ~~r~~~~~~Q~~~rG~~~r~~~~~~~aai~~q~~~r~~~~r~~y---~~~~~~~~~~qs~~r~~~~r~e  759 (862)
T KOG0160|consen  694 QLRSAVIIIQAYSRGVLARRETEREAAAIGIQKECRSYLNRRRY---RALIPASITIQSGVRAMLARNE  759 (862)
T ss_pred             HHHHHHHHHhhhhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHhccc
Confidence            45678999999999999998333337788999999999999999   5567789999999999999983

>COG5022 Myosin heavy chain [Cytoskeleton]

Probab=90.87  E-value=0.45  Score=57.48  Aligned_cols=65  Identities=23%  Similarity=0.332  Sum_probs=48.9

Q ss_pred             HHHHHHHHHHHhhhhHHHHHHHHh-hhHHHHhhhccCcccchhhhHHHHHHhHHHHHHHHHHHHHhh
Q 011955          115 EEAAAIRIQTAFRGYLARRALRAL-RGLVRLKLLMEGPVVKRQAANTLRCMQTLSRLQSQIRSRRVR  180 (474)
Q Consensus       115 ee~AAi~IQsafRGylARral~aL-kgiVrLQalvRG~~vRrqa~~tlr~~qA~vriQs~iR~rr~R  180 (474)
                      -...+++||++||||+.|+.|... +.+..+|.+.+|..+++.+...+. .....++|..++...-|
T Consensus       744 ~~~~~~~iq~aiR~~~~rrr~~~~~k~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~r  809 (1463)
T COG5022         744 LDNIATRIQRAIRGRYLRRRYLQALKRIKKIQVIQHGFRLRRLVDYELK-WRLFIKLQPLLSLLGSR  809 (1463)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccchH-HHhHHHhhHHhHHHhhH
Confidence            355899999999999999888777 888888999999998876643332 44556667666655444

>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]

Probab=89.64  E-value=0.91  Score=53.23  Aligned_cols=63  Identities=25%  Similarity=0.356  Sum_probs=47.2

Q ss_pred             HHHHHHHHhhhhHHHHHHHHh-hhH--H--------HHhhhccCcccchhhh----------------------HHHHHH
Q 011955          118 AAIRIQTAFRGYLARRALRAL-RGL--V--------RLKLLMEGPVVKRQAA----------------------NTLRCM  164 (474)
Q Consensus       118 AAi~IQsafRGylARral~aL-kgi--V--------rLQalvRG~~vRrqa~----------------------~tlr~~  164 (474)
                      =+|+||+++|||-.|+.|+.| -++  .        ++|.-+||+..|+.+.                      ...+--
T Consensus       835 p~v~iqa~~rg~q~r~dy~ki~wSv~~lek~~lrwR~k~~g~Rgfk~~~~~e~~~~a~t~~e~~yd~yKq~~~~~~~r~~  914 (975)
T KOG0520|consen  835 PIVKIQAAVRGYQVRKDYRKITWSVGVLEKLILRWRRKGKGFRGFKGRALFEEQETAATVIEDCYDFYKQLRKQTEERLT  914 (975)
T ss_pred             ccccchhhhhchhHhhhhheechhhhHHHHHHHHHHHhhhhhcccccccchhccccccchHHHHHHHHHHHHHHHHHHHH
Confidence            589999999999999999987 222  1        2377788887765432                      223456


Q ss_pred             hHHHHHHHHHHHHHhh
Q 011955          165 QTLSRLQSQIRSRRVR  180 (474)
Q Consensus       165 qA~vriQs~iR~rr~R  180 (474)
                      +|+++||+.+|....+
T Consensus       915 ~A~~~VQsm~rs~~a~  930 (975)
T KOG0520|consen  915 RAVVRVQSMFRSPKAQ  930 (975)
T ss_pred             HHHHHHHHHhcCHHHH
Confidence            7999999999988777

>KOG2128 consensus Ras GTPase-activating protein family - IQGAP [Signal transduction mechanisms]

Probab=88.36  E-value=0.62  Score=56.08  Aligned_cols=67  Identities=22%  Similarity=0.338  Sum_probs=54.5

Q ss_pred             HHHHHHHHHHHhhhhHH----HHHHHHh-hhHHHHhhhccCcccchhhhH----HHHHHhHHHHHHHHHHHHHhhh
Q 011955          115 EEAAAIRIQTAFRGYLA----RRALRAL-RGLVRLKLLMEGPVVKRQAAN----TLRCMQTLSRLQSQIRSRRVRM  181 (474)
Q Consensus       115 ee~AAi~IQsafRGylA----Rral~aL-kgiVrLQalvRG~~vRrqa~~----tlr~~qA~vriQs~iR~rr~R~  181 (474)
                      ..-..+.||.++|||+.    ...+... +.+|.+|++.||+++|+.+..    ...||...+.||+.+|.+..|.
T Consensus       564 ~~P~~~diq~~vr~~~~~~~~~~~~~~~~~evv~~qs~~R~~lsrk~~~~~~q~~~~~~~~~i~iqs~~r~f~~r~  639 (1401)
T KOG2128|consen  564 QTPFVVDIQALVRGILQYIPRDVYLDSAKKEVVKFQSLTRGALSRKKYSRKLQYFKDNMTKIIKIQSKIRKFPNRK  639 (1401)
T ss_pred             cCchHHHHHHHHHHHhhhchHHHHHHHhhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhhhHHHHHHHHHhcccch
Confidence            34468899999999993    2233333 889999999999999999873    3569999999999999998875

>PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K

Probab=88.29  E-value=0.12  Score=32.59  Aligned_cols=19  Identities=5%  Similarity=0.254  Sum_probs=13.1

Q ss_pred             hhHHHHhhhccCcccchhh
Q 011955          139 RGLVRLKLLMEGPVVKRQA  157 (474)
Q Consensus       139 kgiVrLQalvRG~~vRrqa  157 (474)
                      +++|.||+.+||+++|+++
T Consensus         2 ~aai~iQ~~~R~~~~Rk~~   20 (21)
T PF00612_consen    2 KAAIIIQSYWRGYLARKRY   20 (21)
T ss_dssp             HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhc
Confidence            3566777777777777765

The IQ motif, which can be present in one or more copies, serves as a binding site for different EF-hand proteins including the essential and regulatory myosin light chains, calmodulin (CaM), and CaM-like proteins [, ].Many IQ motifs are protein kinase C (PKC) phosphorylation sites [, ]. Resolution of the 3D structure of scallop myosin has shown that the IQ motif forms a basic amphipathic helix []. Some proteins known to contain an IQ motif are listed below: A number of conventional and unconventional myosins. Neuromodulin (GAP-43). This protein is associated with nerve growth. It is a major component of the motile "growth cones" that form the tips of elongating axons. Neurogranin (NG/p17). Acts as a "third messenger" substrate of protein kinase C-mediated molecular cascades during synaptic development and remodeling. Sperm surface protein Sp17. Ras GTPase-activating-like protein IQGAP1. IQGAP1 contains 4 IQ motifs. This entry covers the entire IQ motif.; GO: 0005515 protein binding; PDB: 2DFS_A 2IX7_C 1OE9_A 1W7J_A 1W7I_A 1KQM_A 1KK7_A 1WDC_A 1DFL_A 1B7T_A ....

>KOG0164 consensus Myosin class I heavy chain [Cytoskeleton]

Probab=87.36  E-value=0.71  Score=52.61  Aligned_cols=55  Identities=22%  Similarity=0.361  Sum_probs=38.3

Q ss_pred             HHHHHHHHHhhhhHHHHHHHHhhh-HHHHhhhccCcccchhhhHHHHHHhHHHHHHHHHHHHHhhhh
Q 011955          117 AAAIRIQTAFRGYLARRALRALRG-LVRLKLLMEGPVVKRQAANTLRCMQTLSRLQSQIRSRRVRMS  182 (474)
Q Consensus       117 ~AAi~IQsafRGylARral~aLkg-iVrLQalvRG~~vRrqa~~tlr~~qA~vriQs~iR~rr~R~~  182 (474)
                      .-++.||.+|||+++|..|+.++. ++.++ ..|.+.++          ..+..||.++|+.+.++.
T Consensus       697 ~lvtllQK~~RG~~~R~ry~rmka~~~ii~-wyR~~K~k----------s~v~el~~~~rg~k~~r~  752 (1001)
T KOG0164|consen  697 SLVTLLQKAWRGWLARQRYRRMKASATIIR-WYRRYKLK----------SYVQELQRRFRGAKQMRD  752 (1001)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH----------HHHHHHHHHHHhhhhccc
Confidence            468999999999999999999944 44445 44522222          234567888888776654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	474
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-06
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	3e-06
2ycu_A	995	Non muscle myosin 2C, alpha-actinin; motor protein	6e-06
1i84_S	1184	Smooth muscle myosin heavy chain; muscle protein,	5e-05
1g8x_A	1010	Myosin II heavy chain fused to alpha-actinin 3; mo	4e-04
2ix7_C	58	Myosin-5A; contractIle protein/metal binding, acti	5e-04
2ix7_C	58	Myosin-5A; contractIle protein/metal binding, acti	6e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 49.9 bits (118), Expect = 2e-06
 Identities = 63/507 (12%), Positives = 130/507 (25%), Gaps = 144/507 (28%)

Query: 1   MGKKGKWF--ASVKNAFSPESKEKKDKKSKKKW--FGKQKEEGSNSAPLETVKTTLPPPA 56
           +   GK +    V  ++  + K       K  W          +    L+ +   + P  
Sbjct: 158 VLGSGKTWVALDVCLSYKVQCK----MDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNW 213

Query: 57  PPL----QPEEVEITVAENELSN---------------HVANEEVITA--------VPAM 89
                     ++ I   + EL                 +V N +   A        +   
Sbjct: 214 TSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILL--- 270

Query: 90  AAVSADQSVTEV-------RIVTNTRFAGKSKEEAAAIRIQTAFRGYLARRA--LR--AL 138
              +  + VT+         I  +      + +E  ++        YL  R   L    L
Sbjct: 271 --TTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSL-----LLKYLDCRPQDLPREVL 323

Query: 139 RG--LVRLKLLMEGPVVKRQAANTLRCMQTLSRLQSQIRSRRVRMSEENQALQRQLLQKH 196
                  L ++ E     R    T         +     +  +  S     L+    +K 
Sbjct: 324 TTNPRR-LSIIAE---SIRDGLATW---DNWKHVNCDKLTTIIESSLNV--LEPAEYRKM 374

Query: 197 AKELAMQMGEE-----------WDDSIQSKEQVEANLLSKYEATMRRERAMAYSFTHQQT 245
              L++                W D I+S   V  N L KY    ++ +    S      
Sbjct: 375 FDRLSV-FPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISI-PSIY 432

Query: 246 WKNSSKSSNPMFMDPRNPTWGWSWLERWMAARPWESRSATEKEPNNDQSSVKSAN----- 300
            +   K  N                E  +     +  +  +   ++D             
Sbjct: 433 LELKVKLEN----------------EYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSH 476

Query: 301 -----RSIVAGEISKSFARYQLNSDKLSPTTNQKISKTPKHQSPSTPTKSASSTVAKKTK 355
                ++I   E    F    L+   L     QKI    +H S                 
Sbjct: 477 IGHHLKNIEHPERMTLFRMVFLDFRFLE----QKI----RHDS----------------- 511

Query: 356 PASPRGSVSGLDDDSRSMVSVQSYRRHSIAGSSVRDDESLPT----SPSAPRYMVPTESA 411
             +   +   + +    +  ++ Y+ + I  +  + +  +       P     ++    +
Sbjct: 512 --TAWNASGSILNT---LQQLKFYKPY-ICDNDPKYERLVNAILDFLPKIEENLI---CS 562

Query: 412 KAKSRLQSPLGVDKNGTPEKATLASAK 438
           K    L+  L  +     E+A     +
Sbjct: 563 KYTDLLRIALMAEDEAIFEEAHKQVQR 589

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080

 Score = 49.0 bits (117), Expect = 3e-06
 Identities = 21/144 (14%), Positives = 49/144 (34%), Gaps = 18/144 (12%)

Query: 108 RFAGKSKEEAAAIRIQTAFRGYLARRALRALR-GLVRLKLLMEGPVVKRQAANTLRCMQT 166
            +A   +   AAI IQ   R Y+ R+  + +R   + L+ L+ G  + R     +     
Sbjct: 808 CYATFLRRTRAAIIIQKFQRMYVVRKRYQCMRDATIALQALLRG-YLVRNKYQMMLREHK 866

Query: 167 LSRLQSQIRSRRVRMSEENQ---------ALQRQLLQKHAKELAMQMGEEWDDSIQSKEQ 217
              +Q  +R    R+                +R + ++  K+L ++     +   +    
Sbjct: 867 SIIIQKHVRGWLARVHYHRTLKAIVYLQCCYRRMMAKRELKKLKIEA-RSVERYKKLHIG 925

Query: 218 VEANL------LSKYEATMRRERA 235
           +E  +      + +     +    
Sbjct: 926 LENKIMQLQRKIDEQNKEYKSLLE 949

>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A* Length = 995

 Score = 48.1 bits (115), Expect = 6e-06
 Identities = 14/129 (10%), Positives = 39/129 (30%), Gaps = 7/129 (5%)

Query: 114 KEEAAAIRIQTAFRGYLARRALRALR---GLVRLKLLMEGPVVKRQAANTLRCMQTLSRL 170
               +   +Q+    +   +          +  L+ +      K +       +      
Sbjct: 785 DFGDSIESVQSFMNAHKEYKKTEKPPKGQEVSELEAIYNSLQTKLRLIKREPFVAPAGLT 844

Query: 171 QSQIRSRRVRMSEENQALQ--RQLLQKHAKELAMQMGEEWDDSIQSKEQVEANLLSKYEA 228
            ++I S    + +  Q      ++  K  K++A+ + +     I  K +  A   S Y  
Sbjct: 845 PNEIDSTWSALEKAEQEHAEALRIELKRQKKIAVLLQKYNR--ILKKLENWATTKSVYLG 902

Query: 229 TMRRERAMA 237
           +     ++ 
Sbjct: 903 SNETGDSIT 911

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184

 Score = 44.8 bits (106), Expect = 5e-05
 Identities = 21/134 (15%), Positives = 51/134 (38%), Gaps = 6/134 (4%)

Query: 108 RFAGKSKEEAAAIRIQTAFRGYLARRALRALRGLVRLKLLMEGPVVKRQAANTLRCMQTL 167
            FA + ++  +   IQ   R ++       +     +  L++    + +       +Q  
Sbjct: 810 AFAKRQQQLESIFCIQYNVRSFMNVXHWPWMXLFFXIXPLLKVTRQEEEMQAKDEELQRT 869

Query: 168 SRLQSQIRSRRVRMSEENQAL--QRQLLQKHAK---ELAMQMGEEWDDSIQSKEQVEANL 222
              Q +  +    + +++  L  ++ LLQ+  +   EL  +  E        K+++E  +
Sbjct: 870 KERQQKAEAELKELEQKHTQLCEEKNLLQEKLQAETELYAEAEEMRVRLAAKKQELEE-I 928

Query: 223 LSKYEATMRRERAM 236
           L + EA +  E   
Sbjct: 929 LHEMEARIEEEEER 942

>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1 Length = 1010

 Score = 42.0 bits (99), Expect = 4e-04
 Identities = 14/135 (10%), Positives = 46/135 (34%), Gaps = 15/135 (11%)

Query: 112 KSKEEAAAIRIQTAFRGYLARRALRALRGLVRLKLLMEGPVV---------KRQAANTLR 162
           + +  +   +     R     + +   +  +  +   +             + +      
Sbjct: 759 EQRLGSEQTKSDYLKRANELVQWINDKQASLESRDFGDSIESVQSFMNAHKEYKKTEKPP 818

Query: 163 CMQTLSRLQSQIRSRRVRMSEENQALQRQLLQKHAKELAMQMGEEWDDSIQSKEQVEANL 222
             Q +S L++   S + ++    + ++R+     A     ++   W  +++  EQ  A  
Sbjct: 819 KGQEVSELEAIYNSLQTKL----RLIKREPFVAPAGLTPNEIDSTW-SALEKAEQEHAEA 873

Query: 223 LSKYEATMRRERAMA 237
           L + E   +++ A+ 
Sbjct: 874 L-RIELKRQKKIAVL 887

>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus} Length = 58

 Score = 37.2 bits (87), Expect = 5e-04
 Identities = 11/23 (47%), Positives = 13/23 (56%)

Query: 117 AAAIRIQTAFRGYLARRALRALR 139
            AAI +Q   RGY AR   + LR
Sbjct: 29  RAAITVQRYVRGYQARCYAKFLR 51

>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus} Length = 58

 Score = 36.8 bits (86), Expect = 6e-04
 Identities = 11/26 (42%), Positives = 15/26 (57%)

Query: 114 KEEAAAIRIQTAFRGYLARRALRALR 139
           K  AA IRIQ   RG+L R+    ++
Sbjct: 3   KLRAACIRIQKTIRGWLLRKRYLCMQ 28

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	474
2ix7_C	58	Myosin-5A; contractIle protein/metal binding, acti	98.94
1n2d_C	48	IQ2 and IQ3 motifs from MYO2P, A class V myosin; p	98.57
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	98.45
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	98.44
2l53_B	31	CAM, voltage-gated sodium channel type V alpha iso	97.96
2kxw_B	27	Sodium channel protein type 2 subunit alpha; actio	97.84
1n2d_C	48	IQ2 and IQ3 motifs from MYO2P, A class V myosin; p	97.39
1wdc_A	64	Scallop myosin; calcium binding protein, muscle pr	96.71
2bl0_A	63	Major plasmodial myosin heavy chain; muscle protei	96.63
2ix7_C	58	Myosin-5A; contractIle protein/metal binding, acti	96.31
1kk8_A	837	Myosin heavy chain, striated muscle; actin-detache	95.93
1wdc_A	64	Scallop myosin; calcium binding protein, muscle pr	95.63
2bl0_A	63	Major plasmodial myosin heavy chain; muscle protei	95.56
3gn4_A	148	Myosin-VI; unconventional myosin, motility, lever	94.75
1i84_S	1184	Smooth muscle myosin heavy chain; muscle protein,	94.75
4dck_A	168	Sodium channel protein type 5 subunit alpha; IQ-mo	91.98
1kk8_A	837	Myosin heavy chain, striated muscle; actin-detache	90.73
1i84_S	1184	Smooth muscle myosin heavy chain; muscle protein,	85.58
1w7j_A	795	Myosin VA; motor protein, unconventional myosin, m	85.22

>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus}

Probab=98.94  E-value=4.9e-10  Score=85.92  Aligned_cols=53  Identities=30%  Similarity=0.421  Sum_probs=46.5

Q ss_pred             HHHHHHHHHHHHhhhhHHHHHHHHh-hhHHHHhhhccCcccchhhhHHHHHHhHH
Q 011955          114 KEEAAAIRIQTAFRGYLARRALRAL-RGLVRLKLLMEGPVVKRQAANTLRCMQTL  167 (474)
Q Consensus       114 ~ee~AAi~IQsafRGylARral~aL-kgiVrLQalvRG~~vRrqa~~tlr~~qA~  167 (474)
                      +.+.|||.||+.||||++|+.|..+ .++|.||+.+||+++|+.+. .++...|+
T Consensus         3 ~~~~aai~IQ~~~Rg~~~Rk~~~~~r~aai~IQ~~~Rg~~aR~~~~-~~r~~~aA   56 (58)
T 2ix7_C            3 KLRAACIRIQKTIRGWLLRKRYLCMQRAAITVQRYVRGYQARCYAK-FLRRTKAA   56 (58)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCc
Confidence            5688999999999999999999999 79999999999999999994 45554544

>1n2d_C IQ2 and IQ3 motifs from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle; 2.00A {Saccharomyces cerevisiae}

Probab=98.57  E-value=2.3e-08  Score=73.66  Aligned_cols=41  Identities=15%  Similarity=0.297  Sum_probs=36.1

Q ss_pred             HHHHHHHHHhhhhHHHHHHHHh-h--hHHHHhhhccCcccchhh
Q 011955          117 AAAIRIQTAFRGYLARRALRAL-R--GLVRLKLLMEGPVVKRQA  157 (474)
Q Consensus       117 ~AAi~IQsafRGylARral~aL-k--giVrLQalvRG~~vRrqa  157 (474)
                      .|||.||+.+|||++|+.|..+ +  ..|.||+.+||+++|+.+
T Consensus         4 ~a~i~iQ~~~Rg~l~R~~~~~~~~~~aai~IQ~~~Rg~~~Rk~y   47 (48)
T 1n2d_C            4 QAIKYLQNNIKGFIIRQRVNDEMKVNCATLLQAAYRGHSIRANV   47 (48)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhh
Confidence            5899999999999999999988 3  788888888888888765

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}

Probab=98.45  E-value=1.2e-07  Score=108.79  Aligned_cols=70  Identities=21%  Similarity=0.289  Sum_probs=54.5

Q ss_pred             hHHHHHHHHHHHHhhhhHHHHHHHHh-hhHHHHhhhccCcccchhhhHHHHHHhHHHHHHHHHHHHHhhhhh
Q 011955          113 SKEEAAAIRIQTAFRGYLARRALRAL-RGLVRLKLLMEGPVVKRQAANTLRCMQTLSRLQSQIRSRRVRMSE  183 (474)
Q Consensus       113 ~~ee~AAi~IQsafRGylARral~aL-kgiVrLQalvRG~~vRrqa~~tlr~~qA~vriQs~iR~rr~R~~~  183 (474)
                      .+++.||++||+.||||++|+.|..+ .++|.||+.+||+++|+++. .++...+++.||+.+|++..|+..
T Consensus       813 lr~~~AAi~IQs~~Rg~~~Rk~y~~lr~aai~IQs~~Rg~laRr~~~-~lr~~~aav~IQ~~~Rg~l~R~~y  883 (1080)
T 2dfs_A          813 LRRTRAAIIIQKFQRMYVVRKRYQCMRDATIALQALLRGYLVRNKYQ-MMLREHKSIIIQKHVRGWLARVHY  883 (1080)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHTTTHHHHHT
T ss_pred             cccchhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence            35677888888888888888888888 78888888888888888874 455566778888888777776543

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}

Probab=98.44  E-value=1.6e-07  Score=107.73  Aligned_cols=67  Identities=28%  Similarity=0.353  Sum_probs=61.9

Q ss_pred             HHHHHHHHHHhhhhHHHHHHHHh-hhHHHHhhhccCcccchhhhHHHHHHhHHHHHHHHHHHHHhhhhh
Q 011955          116 EAAAIRIQTAFRGYLARRALRAL-RGLVRLKLLMEGPVVKRQAANTLRCMQTLSRLQSQIRSRRVRMSE  183 (474)
Q Consensus       116 e~AAi~IQsafRGylARral~aL-kgiVrLQalvRG~~vRrqa~~tlr~~qA~vriQs~iR~rr~R~~~  183 (474)
                      ..||+.||++||||++|+.|+.+ .+++.||+.+||+++|+.+ ..++...|++.||+.+|++.+|+.-
T Consensus       768 ~~aa~~IQa~~Rg~l~Rk~~~~~r~aai~IQ~~~Rg~~aR~~~-~~lr~~~AAi~IQs~~Rg~~~Rk~y  835 (1080)
T 2dfs_A          768 RAACIRIQKTIRGWLMRKKYMRMRRAAITIQRYVRGHQARCYA-TFLRRTRAAIIIQKFQRMYVVRKRY  835 (1080)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhcc-cccccchhHHHHHHHHhhHHHHHHH
Confidence            56999999999999999999999 8999999999999999998 5578899999999999999998753

>2l53_B CAM, voltage-gated sodium channel type V alpha isoform variant; calmodulin, IQ motif, complex, Ca-binding protein; NMR {Homo sapiens}

Probab=97.96  E-value=3.8e-06  Score=57.84  Aligned_cols=24  Identities=46%  Similarity=0.639  Sum_probs=21.7

Q ss_pred             hHHHHHHHHHHHHhhhhHHHHHHH
Q 011955          113 SKEEAAAIRIQTAFRGYLARRALR  136 (474)
Q Consensus       113 ~~ee~AAi~IQsafRGylARral~  136 (474)
                      .+||.||+.||.|||+||.|+.+.
T Consensus         3 k~Ee~aA~vIQrA~R~yl~rr~~~   26 (31)
T 2l53_B            3 GSEEVSAMVIQRAFRRHLLQRSLK   26 (31)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhc
Confidence            579999999999999999998764

>2kxw_B Sodium channel protein type 2 subunit alpha; action potential, amino acid motifs, animals, autism, biomol brain chemistry; NMR {Rattus norvegicus}

Probab=97.84  E-value=5e-06  Score=55.61  Aligned_cols=23  Identities=43%  Similarity=0.700  Sum_probs=20.4

Q ss_pred             hHHHHHHHHHHHHhhhhHHHHHH
Q 011955          113 SKEEAAAIRIQTAFRGYLARRAL  135 (474)
Q Consensus       113 ~~ee~AAi~IQsafRGylARral  135 (474)
                      .+||.||+.||.|||+||.|+.+
T Consensus         3 k~Ee~aA~vIQrA~R~yl~~~~~   25 (27)
T 2kxw_B            3 KQEEVSAIVIQRAYRRYLLKQKV   25 (27)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHSCS
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhh
Confidence            47999999999999999998753

>1n2d_C IQ2 and IQ3 motifs from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle; 2.00A {Saccharomyces cerevisiae}

Probab=97.39  E-value=9.3e-05  Score=54.16  Aligned_cols=43  Identities=16%  Similarity=0.281  Sum_probs=37.9

Q ss_pred             hhHHHHhhhccCcccchhhhHHHHHHhHHHHHHHHHHHHHhhhh
Q 011955          139 RGLVRLKLLMEGPVVKRQAANTLRCMQTLSRLQSQIRSRRVRMS  182 (474)
Q Consensus       139 kgiVrLQalvRG~~vRrqa~~tlr~~qA~vriQs~iR~rr~R~~  182 (474)
                      +.+|.||+.+||.++|+++ ..++...+++.||+.+|++.+|..
T Consensus         4 ~a~i~iQ~~~Rg~l~R~~~-~~~~~~~aai~IQ~~~Rg~~~Rk~   46 (48)
T 1n2d_C            4 QAIKYLQNNIKGFIIRQRV-NDEMKVNCATLLQAAYRGHSIRAN   46 (48)
T ss_dssp             HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhHHHHHh
Confidence            6789999999999999999 556777899999999999988753

>1wdc_A Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} PDB: 3jvt_A 3jtd_A 3pn7_A 3ts5_A 3tuy_A* 1scm_A

Probab=96.71  E-value=0.001  Score=51.66  Aligned_cols=40  Identities=30%  Similarity=0.389  Sum_probs=24.8

Q ss_pred             HHHHHHHHHHhhhhHHHHHHHHh----hhHHHHhhhccCcccch
Q 011955          116 EAAAIRIQTAFRGYLARRALRAL----RGLVRLKLLMEGPVVKR  155 (474)
Q Consensus       116 e~AAi~IQsafRGylARral~aL----kgiVrLQalvRG~~vRr  155 (474)
                      ...++.||+..||||+|+.|..+    .++..||.-+|+++.++
T Consensus         6 ~~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~l~   49 (64)
T 1wdc_A            6 SKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLR   49 (64)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            45678888888888888887765    23334444444444433

>2bl0_A Major plasmodial myosin heavy chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=96.63  E-value=0.00081  Score=52.20  Aligned_cols=22  Identities=27%  Similarity=0.468  Sum_probs=15.9

Q ss_pred             HHHHHHHHHhhhhHHHHHHHHh
Q 011955          117 AAAIRIQTAFRGYLARRALRAL  138 (474)
Q Consensus       117 ~AAi~IQsafRGylARral~aL  138 (474)
                      ..++.||+..||||+|+.|..+
T Consensus         5 ~i~t~~Qa~~RG~l~R~~~~k~   26 (63)
T 2bl0_A            5 EIVKVVQAAARGWVERKHFRQA   26 (63)
T ss_dssp             HHTHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH
Confidence            4567777777777777777754

>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus}

Probab=96.31  E-value=0.0021  Score=48.80  Aligned_cols=42  Identities=14%  Similarity=0.249  Sum_probs=36.5

Q ss_pred             hhHHHHhhhccCcccchhhhHHHHHHhHHHHHHHHHHHHHhhhhh
Q 011955          139 RGLVRLKLLMEGPVVKRQAANTLRCMQTLSRLQSQIRSRRVRMSE  183 (474)
Q Consensus       139 kgiVrLQalvRG~~vRrqa~~tlr~~qA~vriQs~iR~rr~R~~~  183 (474)
                      ..+|.||+.+||+++|+.+   ++...+++.||+.+|++.+|+.-
T Consensus         6 ~aai~IQ~~~Rg~~~Rk~~---~~~r~aai~IQ~~~Rg~~aR~~~   47 (58)
T 2ix7_C            6 AACIRIQKTIRGWLLRKRY---LCMQRAAITVQRYVRGYQARCYA   47 (58)
T ss_dssp             HHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHH
Confidence            6789999999999999999   34457999999999999988763

>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...

Probab=95.93  E-value=0.0034  Score=70.65  Aligned_cols=42  Identities=29%  Similarity=0.347  Sum_probs=33.4

Q ss_pred             HHHHHHHHHHhhhhHHHHHHHHh----hhHHHHhhhccCcccchhh
Q 011955          116 EAAAIRIQTAFRGYLARRALRAL----RGLVRLKLLMEGPVVKRQA  157 (474)
Q Consensus       116 e~AAi~IQsafRGylARral~aL----kgiVrLQalvRG~~vRrqa  157 (474)
                      ..+|+.||+++||||+|+.|+.+    .+++.||..+||+++||..
T Consensus       779 ~~~~~~iQa~~Rg~l~R~~~~k~~~~r~a~~~IQ~~~R~~~~~r~~  824 (837)
T 1kk8_A          779 SKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNW  824 (837)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcch
Confidence            34789999999999999999887    4567777777777776665

>1wdc_A Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} PDB: 3jvt_A 3jtd_A 3pn7_A 3ts5_A 3tuy_A* 1scm_A

Probab=95.63  E-value=0.0088  Score=46.34  Aligned_cols=44  Identities=16%  Similarity=0.144  Sum_probs=39.3

Q ss_pred             hhHHHHhhhccCcccchhhhHHHHHHhHHHHHHHHHHHHHhhhh
Q 011955          139 RGLVRLKLLMEGPVVKRQAANTLRCMQTLSRLQSQIRSRRVRMS  182 (474)
Q Consensus       139 kgiVrLQalvRG~~vRrqa~~tlr~~qA~vriQs~iR~rr~R~~  182 (474)
                      .-++.||+.+||+++|+.+...+...+|+..||..+|++..++.
T Consensus         7 ~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~l~~   50 (64)
T 1wdc_A            7 KIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRN   50 (64)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence            56888999999999999999888889999999999999877654

>2bl0_A Major plasmodial myosin heavy chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=95.56  E-value=0.0078  Score=46.56  Aligned_cols=44  Identities=11%  Similarity=0.001  Sum_probs=39.3

Q ss_pred             hhHHHHhhhccCcccchhhhHHHHHHhHHHHHHHHHHHHHhhhh
Q 011955          139 RGLVRLKLLMEGPVVKRQAANTLRCMQTLSRLQSQIRSRRVRMS  182 (474)
Q Consensus       139 kgiVrLQalvRG~~vRrqa~~tlr~~qA~vriQs~iR~rr~R~~  182 (474)
                      .-++.||+.+||+++|+.+...+...+|+..||..+|++..++.
T Consensus         5 ~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~lr~   48 (63)
T 2bl0_A            5 EIVKVVQAAARGWVERKHFRQAREKSVSARIIQDNIRAYLEFKN   48 (63)
T ss_dssp             HHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            45788999999999999999888889999999999999887764

>3gn4_A Myosin-VI; unconventional myosin, motility, lever ARM, 3-helix bundle, actin-binding, ATP-binding, calmodulin-binding, coiled coil; 2.70A {Sus scrofa}

Probab=94.75  E-value=0.027  Score=51.30  Aligned_cols=34  Identities=29%  Similarity=0.499  Sum_probs=29.3

Q ss_pred             HHHHHHHHHHHhhhhHHHHHHHHh-hhHHHHhhhc
Q 011955          115 EEAAAIRIQTAFRGYLARRALRAL-RGLVRLKLLM  148 (474)
Q Consensus       115 ee~AAi~IQsafRGylARral~aL-kgiVrLQalv  148 (474)
                      ...|+|+||+..||||+|+.++-= .|++++.+|.
T Consensus        44 R~~~~i~iQktvR~~L~rkkhkPRi~g~~kv~~L~   78 (148)
T 3gn4_A           44 RAEACIKMQKTIRMWLCKRRHKPRIDGLVKVGTLK   78 (148)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence            677999999999999999988765 8888887764

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A

Probab=94.75  E-value=0.04  Score=63.85  Aligned_cols=41  Identities=22%  Similarity=0.296  Sum_probs=37.2

Q ss_pred             HHHHHHHHHhhhhHHHHHHHHh----hhHHHHhhhccCcccchhh
Q 011955          117 AAAIRIQTAFRGYLARRALRAL----RGLVRLKLLMEGPVVKRQA  157 (474)
Q Consensus       117 ~AAi~IQsafRGylARral~aL----kgiVrLQalvRG~~vRrqa  157 (474)
                      .+|+.||+.+|||++|+.|..+    .+++.||..+||++.++.+
T Consensus       793 ~~~~~iQ~~~Rg~l~R~~~~k~~~~~~a~~~iQ~~~r~~~~~k~~  837 (1184)
T 1i84_S          793 DVIIAFQAQCRGYLARKAFAKRQQQLESIFCIQYNVRSFMNVXHW  837 (1184)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            5899999999999999999987    4899999999999998864

>4dck_A Sodium channel protein type 5 subunit alpha; IQ-motif, EF-hand, voltage-gated sodium channel regulation, CTD binds to FGF13 and CAM. CAM binds to Ca2+.; 2.20A {Homo sapiens} PDB: 2kbi_A

Probab=91.98  E-value=0.1  Score=48.43  Aligned_cols=25  Identities=44%  Similarity=0.606  Sum_probs=22.6

Q ss_pred             hHHHHHHHHHHHHhhhhHHHHHHHH
Q 011955          113 SKEEAAAIRIQTAFRGYLARRALRA  137 (474)
Q Consensus       113 ~~ee~AAi~IQsafRGylARral~a  137 (474)
                      ..|+.||+.||.+||.|+.|+.+..
T Consensus       127 ~~e~~aA~~IQra~R~~~~r~~~~~  151 (168)
T 4dck_A          127 KHEEVSAMVIQRAFRRHLLQRSLKH  151 (168)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhccccc
Confidence            5789999999999999999988775

>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...

Probab=90.73  E-value=0.19  Score=56.68  Aligned_cols=44  Identities=16%  Similarity=0.144  Sum_probs=38.8

Q ss_pred             hhHHHHhhhccCcccchhhhHHHHHHhHHHHHHHHHHHHHhhhh
Q 011955          139 RGLVRLKLLMEGPVVKRQAANTLRCMQTLSRLQSQIRSRRVRMS  182 (474)
Q Consensus       139 kgiVrLQalvRG~~vRrqa~~tlr~~qA~vriQs~iR~rr~R~~  182 (474)
                      +-++.||+.+||++.|+++...+....|++.||..+|++..|+.
T Consensus       780 ~~~~~iQa~~Rg~l~R~~~~k~~~~r~a~~~IQ~~~R~~~~~r~  823 (837)
T 1kk8_A          780 KIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRN  823 (837)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence            56788999999999999997766777899999999999988764

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A

Probab=85.58  E-value=0.58  Score=54.24  Aligned_cols=46  Identities=11%  Similarity=0.130  Sum_probs=39.7

Q ss_pred             HHh-hhHHHHhhhccCcccchhhhHHHHHHhHHHHHHHHHHHHHhhh
Q 011955          136 RAL-RGLVRLKLLMEGPVVKRQAANTLRCMQTLSRLQSQIRSRRVRM  181 (474)
Q Consensus       136 ~aL-kgiVrLQalvRG~~vRrqa~~tlr~~qA~vriQs~iR~rr~R~  181 (474)
                      ..| .-++.||+.+||++.|+.+...+....+++.||..+|++..++
T Consensus       789 ~~l~~~~~~iQ~~~Rg~l~R~~~~k~~~~~~a~~~iQ~~~r~~~~~k  835 (1184)
T 1i84_S          789 LKITDVIIAFQAQCRGYLARKAFAKRQQQLESIFCIQYNVRSFMNVX  835 (1184)
T ss_dssp             HHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            345 5678899999999999999877777899999999999998775

>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A

Probab=85.22  E-value=0.5  Score=52.98  Aligned_cols=24  Identities=46%  Similarity=0.746  Sum_probs=21.8

Q ss_pred             HHHHHHHHHHhhhhHHHHHHHHhh
Q 011955          116 EAAAIRIQTAFRGYLARRALRALR  139 (474)
Q Consensus       116 e~AAi~IQsafRGylARral~aLk  139 (474)
                      ..+|+.||+++||||+|+.|+.++
T Consensus       768 ~~~~~~iQ~~~Rg~l~R~~~~~~r  791 (795)
T 1w7j_A          768 RAACIRIQKTIRGWLMRKKYMRMR  791 (795)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH
Confidence            358999999999999999999884

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	474
d2mysa2	794	c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain	8e-04

>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 794

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]

 Score = 39.7 bits (92), Expect = 8e-04
 Identities = 5/42 (11%), Positives = 17/42 (40%)

Query: 108 RFAGKSKEEAAAIRIQTAFRGYLARRALRALRGLVRLKLLME 149
            +    +   +   IQ   R ++  +    ++   ++K L++
Sbjct: 753 EYRAMVERRESIFCIQYNVRSFMNVKHWPWMKLFFKIKPLLK 794

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	474
d1kk8a2	789	Myosin S1, motor domain {Bay scallop (Aequipecten	96.6
d2mysa2	794	Myosin S1, motor domain {Chicken (Gallus gallus),	96.51
d2mysa2	794	Myosin S1, motor domain {Chicken (Gallus gallus),	92.83
d1kk8a2	789	Myosin S1, motor domain {Bay scallop (Aequipecten	90.0
d1w7ja2	730	Myosin S1, motor domain {Chicken (Gallus gallus),	88.68

>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=96.60  E-value=0.00041  Score=74.73  Aligned_cols=43  Identities=28%  Similarity=0.348  Sum_probs=36.1

Q ss_pred             HHHHHHHHHHHhhhhHHHHHHHHhh----hHHHHhhhccCcccchhh
Q 011955          115 EEAAAIRIQTAFRGYLARRALRALR----GLVRLKLLMEGPVVKRQA  157 (474)
Q Consensus       115 ee~AAi~IQsafRGylARral~aLk----giVrLQalvRG~~vRrqa  157 (474)
                      ...+|+.||+.||||++|+.|+.+|    .++.||..+||+++||.+
T Consensus       730 l~~~~~~IQ~~~R~~~~Rk~y~k~r~~~~ai~~iQ~~~R~~~~rr~~  776 (789)
T d1kk8a2         730 LSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNW  776 (789)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence            3558999999999999999999884    577778888888887776

>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]

Probab=96.51  E-value=0.00049  Score=74.17  Aligned_cols=42  Identities=17%  Similarity=0.241  Sum_probs=36.3

Q ss_pred             HHHHHHHHHHhhhhHHHHHHHHh----hhHHHHhhhccCcccchhh
Q 011955          116 EAAAIRIQTAFRGYLARRALRAL----RGLVRLKLLMEGPVVKRQA  157 (474)
Q Consensus       116 e~AAi~IQsafRGylARral~aL----kgiVrLQalvRG~~vRrqa  157 (474)
                      ..+|+.||+.+|||++|+.|+.+    .+++.||+.+||+++||.+
T Consensus       735 ~~~~~~IQ~~~Rg~l~Rk~~~~~~~~r~a~~~IQ~~~R~~~~~r~~  780 (794)
T d2mysa2         735 AEIITATQARCRGFLMRVEYRAMVERRESIFCIQYNVRSFMNVKHW  780 (794)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            45899999999999999999876    4688888888888888876

>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]

Probab=92.83  E-value=0.037  Score=59.22  Aligned_cols=54  Identities=11%  Similarity=0.025  Sum_probs=43.2

Q ss_pred             hHHHHHHHHh-hhHHHHhhhccCcccchhhhHHHHHHhHHHHHHHHHHHHHhhhh
Q 011955          129 YLARRALRAL-RGLVRLKLLMEGPVVKRQAANTLRCMQTLSRLQSQIRSRRVRMS  182 (474)
Q Consensus       129 ylARral~aL-kgiVrLQalvRG~~vRrqa~~tlr~~qA~vriQs~iR~rr~R~~  182 (474)
                      +|....-..+ +.++.||+.+||+++|+++...++...|++.||+.+|++..|+.
T Consensus       725 ~LE~~r~~~l~~~~~~IQ~~~Rg~l~Rk~~~~~~~~r~a~~~IQ~~~R~~~~~r~  779 (794)
T d2mysa2         725 LLEEMRDDKLAEIITATQARCRGFLMRVEYRAMVERRESIFCIQYNVRSFMNVKH  779 (794)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            3333333344 67889999999999999998777778899999999999988764

>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=90.00  E-value=0.11  Score=55.40  Aligned_cols=44  Identities=16%  Similarity=0.144  Sum_probs=37.3

Q ss_pred             hhHHHHhhhccCcccchhhhHHHHHHhHHHHHHHHHHHHHhhhh
Q 011955          139 RGLVRLKLLMEGPVVKRQAANTLRCMQTLSRLQSQIRSRRVRMS  182 (474)
Q Consensus       139 kgiVrLQalvRG~~vRrqa~~tlr~~qA~vriQs~iR~rr~R~~  182 (474)
                      +.++.||+.+||+++|+++........+++.||+.+|++..|+.
T Consensus       732 ~~~~~IQ~~~R~~~~Rk~y~k~r~~~~ai~~iQ~~~R~~~~rr~  775 (789)
T d1kk8a2         732 KIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRN  775 (789)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence            66788899999999999997555556689999999999988865

>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), Va isoform [TaxId: 9031]

Probab=88.68  E-value=0.12  Score=54.37  Aligned_cols=25  Identities=44%  Similarity=0.679  Sum_probs=21.7

Q ss_pred             HHHHHHHHHHHhhhhHHHHHHHHhh
Q 011955          115 EEAAAIRIQTAFRGYLARRALRALR  139 (474)
Q Consensus       115 ee~AAi~IQsafRGylARral~aLk  139 (474)
                      ...+||+||+.||||++||.|..+|
T Consensus       705 l~~~~~~iQ~~~R~~l~Rk~~~r~r  729 (730)
T d1w7ja2         705 LRAACIRIQKTIRGWLMRKKYMRMR  729 (730)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            3458999999999999999998764