Citrus Sinensis ID: 011966

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470----
MISEKQADEEMVSSLNESESQEKEEQIKQDDSKFGLKSLLWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGIILQIFYGIMGSWTAYLISVLYVEYRSRKEKENVSFKNHVIQWFEVLDGLLGPYWKAVGLAFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRLWSFLGLGMTTYTAWYLTIAAFVHGQVDGVTHSGPSTLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKSIYLLATLYVFTLTIPSAAAVYWAFGDQLLTHSNAFSLLPRSRWRDVAVILMLIHQFITFGFACTPLYFVWEKVVGMHDTKSICLRALARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPALAHMLTYRSASARQNSAEKLPFFLPSWTAMYVVNTFILVWVLVVGFGLGGWASMTNFIKQVDTFGLFAKCYQCPPPASATAH
cccccccHHHHHcccccccHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccc
cccHHHHHHHEEEccccEcccccccccccccccccHHHEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHEEHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHcccccHHHHHHHcccccHcHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHcccccHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHcHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHcccccccccccHHHHHHHHHHEHHHHHHHHHcHHHHHHHHHHHHHHHcccccHHHcccccccccccc
MISEKQADEEMVSSLNESESQEKEEQIKQDDSKFGLKSLlwhggsvydawFSCASNQVAQVLLTLpysfsqlgmLSGIILQIFYGIMGSWTAYLISVLYVEYRSRKEKENVSFKNHVIQWFEVLDGLLGPYWKAVGLAFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGAccattvfipsfhnyRLWSFLGLGMTTYTAWYLTIAAFVHgqvdgvthsgpsTLVLYFTGATNILYTFGGHAVTVEIMHAmwkpqkfkSIYLLATLYVFTLTIPSAAAVYWAFGDQLlthsnafsllprsrwRDVAVILMLIHQFITfgfactplYFVWEKVVGMHDTKSICLRALarlpvvipIWFLAIifpffgpinSAVGALLVSFTVYIIPALAHMLTYRSasarqnsaeklpfflpswtAMYVVNTFILVWVLVVGFGLGGWASMTNFIKQVDTFGlfakcyqcpppasatah
misekqadeemvsslnesesqekEEQIKQDDSKFGLKSLLWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGIILQIFYGIMGSWTAYLISVLYVEYRSRKEKENVSFKNHVIQWFEVLDGLLGPYWKAVGLAFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRLWSFLGLGMTTYTAWYLTIAAFVHGQVDGVTHSGPSTLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKSIYLLATLYVFTLTIPSAAAVYWAFGDQLLTHSNAFSLLPRSRWRDVAVILMLIHQFITFGFACTPLYFVWEKVVGMHDTKSICLRALARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPALAHMLTYRSASARQNSAEKLPFFLPSWTAMYVVNTFILVWVLVVGFGLGGWASMTNFIKQVDTFGLFAKCYQCPPPASATAH
MISEKQADEEMVSSLNesesqekeeqikqddskFGLKSLLWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGIILQIFYGIMGSWTAYLISVLYVEYRSRKEKENVSFKNHVIQWFEVLDGLLGPYWKAVGLAFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRLWSFLGLGMTTYTAWYLTIAAFVHGQVDGVTHSGPSTLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKSIYLLATLYVFTLTIPSAAAVYWAFGDQLLTHSNAFSLLPRSRWRDVAVILMLIHQFITFGFACTPLYFVWEKVVGMHDTKSICLRALARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPALAHMLTYRSASARQNSAEKLPFFLPSWTAMYVVNTFIlvwvlvvgfglggwASMTNFIKQVDTFGLFAKCYQCPPPASATAH
*********************************FGLKSLLWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGIILQIFYGIMGSWTAYLISVLYVEYRSRKEKENVSFKNHVIQWFEVLDGLLGPYWKAVGLAFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRLWSFLGLGMTTYTAWYLTIAAFVHGQVDGVTHSGPSTLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKSIYLLATLYVFTLTIPSAAAVYWAFGDQLLTHSNAFSLLPRSRWRDVAVILMLIHQFITFGFACTPLYFVWEKVVGMHDTKSICLRALARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPALAHMLTYRSASARQNSAEKLPFFLPSWTAMYVVNTFILVWVLVVGFGLGGWASMTNFIKQVDTFGLFAKCYQC*********
**************************************LLWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGIILQIFYGIMGSWTAYLISVLYVEYRSRKEKENVSFKNHVIQWFEVLDGLLGPYWKAVGLAFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRLWSFLGLGMTTYTAWYLTIAAFVHGQVDGVTHSGPSTLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKSIYLLATLYVFTLTIPSAAAVYWAFGDQLLTHSNAFSLLPRSRWRDVAVILMLIHQFITFGFACTPLYFVWEKVVGMHDTKSICLRALARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPALAHMLTYRSASARQNSAEKLPFFLPSWTAMYVVNTFILVWVLVVGFGLGGWASMTNFIKQVDTFGLFAKCY***********
******************************DSKFGLKSLLWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGIILQIFYGIMGSWTAYLISVLYVEYRSRKEKENVSFKNHVIQWFEVLDGLLGPYWKAVGLAFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRLWSFLGLGMTTYTAWYLTIAAFVHGQVDGVTHSGPSTLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKSIYLLATLYVFTLTIPSAAAVYWAFGDQLLTHSNAFSLLPRSRWRDVAVILMLIHQFITFGFACTPLYFVWEKVVGMHDTKSICLRALARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPALAHMLTYRSASARQNSAEKLPFFLPSWTAMYVVNTFILVWVLVVGFGLGGWASMTNFIKQVDTFGLFAKCYQCPPPASATAH
********************************KFGLKSLLWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGIILQIFYGIMGSWTAYLISVLYVEYRSRKEKENVSFKNHVIQWFEVLDGLLGPYWKAVGLAFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRLWSFLGLGMTTYTAWYLTIAAFVHGQVDGVTHSGPSTLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKSIYLLATLYVFTLTIPSAAAVYWAFGDQLLTHSNAFSLLPRSRWRDVAVILMLIHQFITFGFACTPLYFVWEKVVGMHDTKSICLRALARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPALAHMLTYRSASARQNSAEKLPFFLPSWTAMYVVNTFILVWVLVVGFGLGGWASMTNFIKQVDTFGLFAKCYQCPPP******
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MISEKQADEEMVSSLNESESQEKEEQIKQDDSKFGLKSLLWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGIILQIFYGIMGSWTAYLISVLYVEYRSRKEKENVSFKNHVIQWFEVLDGLLGPYWKAVGLAFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRLWSFLGLGMTTYTAWYLTIAAFVHGQVDGVTHSGPSTLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKSIYLLATLYVFTLTIPSAAAVYWAFGDQLLTHSNAFSLLPRSRWRDVAVILMLIHQFITFGFACTPLYFVWEKVVGMHDTKSICLRALARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPALAHMLTYRSASARQNSAEKLPFFLPSWTAMYVVNTFILVWVLVVGFGLGGWASMTNFIKQVDTFGLFAKCYQCPPPASATAH
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query474 2.2.26 [Sep-21-2011]
Q9FEL7484 Auxin transporter-like pr N/A no 0.976 0.956 0.855 0.0
Q9FEL8479 Auxin transporter-like pr N/A no 1.0 0.989 0.848 0.0
Q5N892492 Auxin transporter-like pr yes no 1.0 0.963 0.820 0.0
Q8L884482 Auxin transporter-like pr N/A no 0.981 0.964 0.843 0.0
Q96247485 Auxin transporter protein yes no 0.985 0.962 0.825 0.0
Q9LFB2488 Auxin transporter-like pr no no 0.981 0.952 0.826 0.0
Q688J2482 Auxin transporter-like pr no no 0.989 0.973 0.837 0.0
Q8L883490 Auxin transporter-like pr N/A no 0.985 0.953 0.783 0.0
Q9S836483 Auxin transporter-like pr no no 0.966 0.948 0.779 0.0
Q7XGU4547 Auxin transporter-like pr no no 0.938 0.813 0.777 0.0
>sp|Q9FEL7|LAX2_MEDTR Auxin transporter-like protein 2 OS=Medicago truncatula GN=LAX2 PE=2 SV=1 Back     alignment and function desciption
 Score =  847 bits (2189), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 401/469 (85%), Positives = 438/469 (93%), Gaps = 6/469 (1%)

Query: 1   MISEKQADEEMVSSLNESESQE----KEEQIKQDDSKFGLKSLLWHGGSVYDAWFSCASN 56
           M+ +KQ +E +VSS NE++ QE    +EE++  +D  F +K+ LWHGGSV+DAWFSCASN
Sbjct: 1   MLPQKQGEEAIVSSFNETDQQEGVVGREEEV--EDHSFSVKNFLWHGGSVWDAWFSCASN 58

Query: 57  QVAQVLLTLPYSFSQLGMLSGIILQIFYGIMGSWTAYLISVLYVEYRSRKEKENVSFKNH 116
           QVAQVLLTLPYSFSQLGMLSGI+LQ+FYGI+GSWTAYLISVLYVEYRSRKEKENV+FKNH
Sbjct: 59  QVAQVLLTLPYSFSQLGMLSGILLQVFYGILGSWTAYLISVLYVEYRSRKEKENVNFKNH 118

Query: 117 VIQWFEVLDGLLGPYWKAVGLAFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFG 176
           VIQWFEVLDGLLGPYWKA+GLAFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFG
Sbjct: 119 VIQWFEVLDGLLGPYWKALGLAFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFG 178

Query: 177 ACCATTVFIPSFHNYRLWSFLGLGMTTYTAWYLTIAAFVHGQVDGVTHSGPSTLVLYFTG 236
           ACCATTVFIPSFHNYR+WSFLGLGMTTYTAWYLTIA+ VHGQ + VTH+GP  LVLYFTG
Sbjct: 179 ACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLTIASIVHGQAENVTHTGPKKLVLYFTG 238

Query: 237 ATNILYTFGGHAVTVEIMHAMWKPQKFKSIYLLATLYVFTLTIPSAAAVYWAFGDQLLTH 296
           ATNILYTFGGHAVTVEIMHAMWKPQKFK IYL+ATLYVFTLTIPSA AVYWAFGD+LL H
Sbjct: 239 ATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLMATLYVFTLTIPSATAVYWAFGDELLNH 298

Query: 297 SNAFSLLPRSRWRDVAVILMLIHQFITFGFACTPLYFVWEKVVGMHDTKSICLRALARLP 356
           SNAFSLLP++ WRD AVILMLIHQFITFGFACTPLYFVWEKV+GMHDT+SICLRALARLP
Sbjct: 299 SNAFSLLPKNGWRDGAVILMLIHQFITFGFACTPLYFVWEKVIGMHDTRSICLRALARLP 358

Query: 357 VVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPALAHMLTYRSASARQNSAEKLPFFL 416
           VVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIP+ AHMLTYR ASAR+N+AEK PFF+
Sbjct: 359 VVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPSAAHMLTYRKASARKNAAEKPPFFM 418

Query: 417 PSWTAMYVVNTFILVWVLVVGFGLGGWASMTNFIKQVDTFGLFAKCYQC 465
           PSWTAMY+ N FI++WVLVVGFG GGWASMTNFI+Q+DTFGLFAKCYQC
Sbjct: 419 PSWTAMYIFNAFIVIWVLVVGFGFGGWASMTNFIRQIDTFGLFAKCYQC 467
Carrier protein involved in proton-driven auxin influx. Mediates the formation of auxin gradient from developing leaves (site of auxin biosynthesis) to tips by contributing to the loading of auxin in vascular tissues and facilitating acropetal (base to tip) auxin transport within inner tissues of the root apex, and basipetal (tip to base) auxin transport within outer tissues of the root apex (By similarity). May be involved in lateral roots and nodules formation.
Medicago truncatula (taxid: 3880)
>sp|Q9FEL8|LAX1_MEDTR Auxin transporter-like protein 1 OS=Medicago truncatula GN=LAX1 PE=2 SV=1 Back     alignment and function description
>sp|Q5N892|LAX1_ORYSJ Auxin transporter-like protein 1 OS=Oryza sativa subsp. japonica GN=Os01g0856500 PE=2 SV=2 Back     alignment and function description
>sp|Q8L884|LAX4_MEDTR Auxin transporter-like protein 4 OS=Medicago truncatula GN=LAX4 PE=2 SV=1 Back     alignment and function description
>sp|Q96247|AUX1_ARATH Auxin transporter protein 1 OS=Arabidopsis thaliana GN=AUX1 PE=1 SV=1 Back     alignment and function description
>sp|Q9LFB2|LAX1_ARATH Auxin transporter-like protein 1 OS=Arabidopsis thaliana GN=LAX1 PE=1 SV=1 Back     alignment and function description
>sp|Q688J2|LAX2_ORYSJ Auxin transporter-like protein 2 OS=Oryza sativa subsp. japonica GN=Os05g0447200 PE=2 SV=1 Back     alignment and function description
>sp|Q8L883|LAX5_MEDTR Auxin transporter-like protein 5 OS=Medicago truncatula GN=LAX5 PE=2 SV=1 Back     alignment and function description
>sp|Q9S836|LAX2_ARATH Auxin transporter-like protein 2 OS=Arabidopsis thaliana GN=LAX2 PE=2 SV=1 Back     alignment and function description
>sp|Q7XGU4|LAX3_ORYSJ Auxin transporter-like protein 3 OS=Oryza sativa subsp. japonica GN=Os10g0147400 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query474
224112551473 auxin influx carrier component [Populus 0.997 1.0 0.875 0.0
255571873472 amino acid transporter, putative [Ricinu 0.981 0.985 0.899 0.0
10441742473 putative AUX1-like permease [Populus tre 0.997 1.0 0.873 0.0
224098529471 auxin influx carrier component [Populus 0.993 1.0 0.867 0.0
225448371471 PREDICTED: auxin transporter-like protei 0.987 0.993 0.869 0.0
449529890478 PREDICTED: auxin transporter-like protei 0.995 0.987 0.856 0.0
449439906478 PREDICTED: auxin transporter-like protei 0.995 0.987 0.854 0.0
226235313476 auxin influx carrier protein [Zinnia vio 1.0 0.995 0.861 0.0
56562199483 putative auxin influx carrier protein [P 1.0 0.981 0.840 0.0
356568064491 PREDICTED: auxin transporter-like protei 0.981 0.947 0.864 0.0
>gi|224112551|ref|XP_002316226.1| auxin influx carrier component [Populus trichocarpa] gi|222865266|gb|EEF02397.1| auxin influx carrier component [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  872 bits (2252), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 415/474 (87%), Positives = 444/474 (93%), Gaps = 1/474 (0%)

Query: 1   MISEKQADEEMVSSLNESESQEKEEQIKQDDSKFGLKSLLWHGGSVYDAWFSCASNQVAQ 60
           M ++KQ +E MVS+ N++E +EKEE + +D+S F LKS+LWHGGSVYDAWFSCASNQVAQ
Sbjct: 1   MSNQKQGEEAMVSTFNDTEHEEKEE-VSKDESGFRLKSILWHGGSVYDAWFSCASNQVAQ 59

Query: 61  VLLTLPYSFSQLGMLSGIILQIFYGIMGSWTAYLISVLYVEYRSRKEKENVSFKNHVIQW 120
           VLLTLPYSFSQ+GMLSGIILQIFYG +GSWTAYLISVLYVEYRSRKEKENV+FKNHVIQW
Sbjct: 60  VLLTLPYSFSQMGMLSGIILQIFYGFLGSWTAYLISVLYVEYRSRKEKENVNFKNHVIQW 119

Query: 121 FEVLDGLLGPYWKAVGLAFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCA 180
           FEVLDGLLGP WKAVGLAFNCTFLLFGSVIQLIACASNIYYI+D  DKRTWTYIFGACCA
Sbjct: 120 FEVLDGLLGPTWKAVGLAFNCTFLLFGSVIQLIACASNIYYIDDKFDKRTWTYIFGACCA 179

Query: 181 TTVFIPSFHNYRLWSFLGLGMTTYTAWYLTIAAFVHGQVDGVTHSGPSTLVLYFTGATNI 240
           TTVFIPSFHNYR+WSFLGLGMTTYTAWY+TIA+ VHGQVDGVTHSGP+  VLYFTGATNI
Sbjct: 180 TTVFIPSFHNYRIWSFLGLGMTTYTAWYMTIASLVHGQVDGVTHSGPAKAVLYFTGATNI 239

Query: 241 LYTFGGHAVTVEIMHAMWKPQKFKSIYLLATLYVFTLTIPSAAAVYWAFGDQLLTHSNAF 300
           LYTFGGHAVTVEIMHAMWKPQ+FK IYLLATLYVFTLT+PSAAA YWAFGDQLLTHSNAF
Sbjct: 240 LYTFGGHAVTVEIMHAMWKPQRFKYIYLLATLYVFTLTLPSAAATYWAFGDQLLTHSNAF 299

Query: 301 SLLPRSRWRDVAVILMLIHQFITFGFACTPLYFVWEKVVGMHDTKSICLRALARLPVVIP 360
           SLLPR+ WRD AVILMLIHQFITFGFACTPLYFVWEKV+GMHDTKSI LRAL RLPVVIP
Sbjct: 300 SLLPRTGWRDAAVILMLIHQFITFGFACTPLYFVWEKVIGMHDTKSILLRALCRLPVVIP 359

Query: 361 IWFLAIIFPFFGPINSAVGALLVSFTVYIIPALAHMLTYRSASARQNSAEKLPFFLPSWT 420
           IWF AIIFPFFGPINSAVGALLV+FTVYIIPALAHMLTYRSASARQN+ EK P FLPSWT
Sbjct: 360 IWFFAIIFPFFGPINSAVGALLVTFTVYIIPALAHMLTYRSASARQNAVEKPPVFLPSWT 419

Query: 421 AMYVVNTFILVWVLVVGFGLGGWASMTNFIKQVDTFGLFAKCYQCPPPASATAH 474
           AMYV+N FI+VWVLVVGFGLGGWASM+NFIKQVDTFGLFAKCYQCPP A+A  H
Sbjct: 420 AMYVLNAFIVVWVLVVGFGLGGWASMSNFIKQVDTFGLFAKCYQCPPSAAAKHH 473

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255571873|ref|XP_002526879.1| amino acid transporter, putative [Ricinus communis] gi|223533778|gb|EEF35510.1| amino acid transporter, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|10441742|gb|AAG17171.1|AF190880_1 putative AUX1-like permease [Populus tremula x Populus tremuloides] Back     alignment and taxonomy information
>gi|224098529|ref|XP_002311208.1| auxin influx carrier component [Populus trichocarpa] gi|222851028|gb|EEE88575.1| auxin influx carrier component [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225448371|ref|XP_002268925.1| PREDICTED: auxin transporter-like protein 2 [Vitis vinifera] gi|297736635|emb|CBI25506.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449529890|ref|XP_004171931.1| PREDICTED: auxin transporter-like protein 2-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449439906|ref|XP_004137726.1| PREDICTED: auxin transporter-like protein 2-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|226235313|dbj|BAH47612.1| auxin influx carrier protein [Zinnia violacea] Back     alignment and taxonomy information
>gi|56562199|emb|CAI05895.1| putative auxin influx carrier protein [Prunus avium] Back     alignment and taxonomy information
>gi|356568064|ref|XP_003552233.1| PREDICTED: auxin transporter-like protein 2-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query474
TAIR|locus:2005496485 AUX1 "AT2G38120" [Arabidopsis 0.924 0.903 0.861 3.4e-212
TAIR|locus:2150089488 LAX1 "AT5G01240" [Arabidopsis 0.930 0.903 0.844 6.3e-211
TAIR|locus:2047102483 LAX2 "AT2G21050" [Arabidopsis 0.913 0.896 0.796 4.8e-197
TAIR|locus:2203226470 LAX3 "AT1G77690" [Arabidopsis 0.911 0.919 0.773 1.6e-191
UNIPROTKB|Q85V22441 ht "Histidine amino acid trans 0.725 0.780 0.233 1.5e-12
WB|WBGene00012529519 Y32F6A.4 [Caenorhabditis elega 0.734 0.670 0.228 2.8e-12
TAIR|locus:2008605441 AT1G67640 "AT1G67640" [Arabido 0.713 0.766 0.228 7.3e-11
WB|WBGene00022012465 Y59H11AR.4 [Caenorhabditis ele 0.729 0.744 0.242 4.9e-10
TAIR|locus:2185143526 AT5G02170 [Arabidopsis thalian 0.679 0.612 0.234 6.2e-10
TAIR|locus:2083549528 AT3G09340 "AT3G09340" [Arabido 0.459 0.412 0.259 1.2e-09
TAIR|locus:2005496 AUX1 "AT2G38120" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2051 (727.0 bits), Expect = 3.4e-212, P = 3.4e-212
 Identities = 378/439 (86%), Positives = 405/439 (92%)

Query:    36 LKSLLWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGIILQIFYGIMGSWTAYLI 95
             L + LWHGGSV+DAWFSCASNQVAQVLLTLPYSFSQLGMLSGI+LQIFYG++GSWTAYLI
Sbjct:    38 LSNFLWHGGSVWDAWFSCASNQVAQVLLTLPYSFSQLGMLSGIVLQIFYGLLGSWTAYLI 97

Query:    96 SVLYVEYRSRKEKENVSFKNHVIQWFEVLDGLLGPYWKAVGLAFNCTFLLFGSVIQLIAC 155
             SVLYVEYR+RKEKE  SFKNHVIQWFEVLDGLLG YWKA+GLAFNCTFLLFGSVIQLIAC
Sbjct:    98 SVLYVEYRARKEKEGKSFKNHVIQWFEVLDGLLGSYWKALGLAFNCTFLLFGSVIQLIAC 157

Query:   156 ASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRLWSFLGLGMTTYTAWYLTIAAFV 215
             ASNIYYIND+LDKRTWTYIFGACCATTVFIPSFHNYR+WSFLGLGMTTYTAWYL IA+ +
Sbjct:   158 ASNIYYINDHLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLAIASII 217

Query:   216 HGQVDGVTHSGPSTLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKSIYLLATLYVF 275
             HGQ +GV HSGP+ LVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFK IYL+ATLYVF
Sbjct:   218 HGQAEGVKHSGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLMATLYVF 277

Query:   276 TLTIPSAAAVYWAFGDQLLTHSNAFSLLPRSRWRDVAVILMLIHQFITFGFACTPLYFVW 335
             TLTIPSAAAVYWAFGD LL HSNAFSL+P++ WRD AVILMLIHQFITFGFACTPLYFVW
Sbjct:   278 TLTIPSAAAVYWAFGDALLDHSNAFSLMPKNAWRDAAVILMLIHQFITFGFACTPLYFVW 337

Query:   336 EKVVGMHDTKSICLRALARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPALAH 395
             EKV+GMHDTKSICLRALARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIP+LAH
Sbjct:   338 EKVIGMHDTKSICLRALARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPSLAH 397

Query:   396 MLTYRSASARQNSAEKLPFFLPSWTAMYVVNTFIXXXXXXXXXXXXXXASMTNFIKQVDT 455
             MLTYRSASARQN+AEK PFF+PSWTAMYV+N F+              AS+TNF++QVDT
Sbjct:   398 MLTYRSASARQNAAEKPPFFMPSWTAMYVLNAFVVVWVLIVGFGFGGWASVTNFVRQVDT 457

Query:   456 FGLFAKCYQCPPPASATAH 474
             FGLFAKCYQC P A+A AH
Sbjct:   458 FGLFAKCYQCKP-AAAAAH 475
GO:0005215 "transporter activity" evidence=ISS
GO:0005886 "plasma membrane" evidence=ISM;IDA
GO:0006865 "amino acid transport" evidence=ISS
GO:0009723 "response to ethylene stimulus" evidence=NAS
GO:0009733 "response to auxin stimulus" evidence=NAS
GO:0015171 "amino acid transmembrane transporter activity" evidence=ISS
GO:0016020 "membrane" evidence=ISS
GO:0009986 "cell surface" evidence=IDA
GO:0009624 "response to nematode" evidence=IEP
GO:0010328 "auxin influx transmembrane transporter activity" evidence=IDA
GO:0009926 "auxin polar transport" evidence=RCA;TAS
GO:0001736 "establishment of planar polarity" evidence=IGI
GO:0048765 "root hair cell differentiation" evidence=IGI;RCA
GO:0005768 "endosome" evidence=IDA
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0010311 "lateral root formation" evidence=IGI;IMP
GO:0010011 "auxin binding" evidence=IDA
GO:0048829 "root cap development" evidence=IMP
GO:0000271 "polysaccharide biosynthetic process" evidence=RCA
GO:0006949 "syncytium formation" evidence=RCA
GO:0007155 "cell adhesion" evidence=RCA
GO:0007389 "pattern specification process" evidence=RCA
GO:0008361 "regulation of cell size" evidence=RCA
GO:0009825 "multidimensional cell growth" evidence=RCA
GO:0009932 "cell tip growth" evidence=RCA
GO:0010015 "root morphogenesis" evidence=RCA
GO:0010090 "trichome morphogenesis" evidence=RCA
GO:0010218 "response to far red light" evidence=RCA
GO:0010817 "regulation of hormone levels" evidence=RCA
GO:0040007 "growth" evidence=RCA
GO:0043481 "anthocyanin accumulation in tissues in response to UV light" evidence=RCA
GO:0045010 "actin nucleation" evidence=RCA
GO:0048767 "root hair elongation" evidence=RCA
GO:0071555 "cell wall organization" evidence=RCA
GO:0009958 "positive gravitropism" evidence=IMP
TAIR|locus:2150089 LAX1 "AT5G01240" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2047102 LAX2 "AT2G21050" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2203226 LAX3 "AT1G77690" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q85V22 ht "Histidine amino acid transporter" [Oryza sativa Indica Group (taxid:39946)] Back     alignment and assigned GO terms
WB|WBGene00012529 Y32F6A.4 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
TAIR|locus:2008605 AT1G67640 "AT1G67640" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
WB|WBGene00022012 Y59H11AR.4 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
TAIR|locus:2185143 AT5G02170 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2083549 AT3G09340 "AT3G09340" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9LFB2LAX1_ARATHNo assigned EC number0.82660.98100.9528nono
Q5N892LAX1_ORYSJNo assigned EC number0.82021.00.9634yesno
Q53JG7LAX4_ORYSJNo assigned EC number0.76650.91770.9062nono
Q9S836LAX2_ARATHNo assigned EC number0.77960.96620.9482nono
Q96247AUX1_ARATHNo assigned EC number0.82520.98520.9628yesno
Q9FEL7LAX2_MEDTRNo assigned EC number0.85500.97670.9566N/Ano
Q9FEL6LAX3_MEDTRNo assigned EC number0.78580.97460.9935N/Ano
Q688J2LAX2_ORYSJNo assigned EC number0.83790.98940.9730nono
Q9CA25LAX3_ARATHNo assigned EC number0.76780.96620.9744nono
Q8L883LAX5_MEDTRNo assigned EC number0.78340.98520.9530N/Ano
Q8L884LAX4_MEDTRNo assigned EC number0.84360.98100.9647N/Ano
Q7XGU4LAX3_ORYSJNo assigned EC number0.77750.93880.8135nono
Q9FEL8LAX1_MEDTRNo assigned EC number0.84841.00.9895N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
PtrAUX3
auxin influx carrier component (474 aa)
(Populus trichocarpa)
Predicted Functional Partners:
eugene3.16980001
Atp-binding cassette (167 aa)
      • 0.510

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query474
PLN03074473 PLN03074, PLN03074, auxin influx permease; Provisi 0.0
pfam01490406 pfam01490, Aa_trans, Transmembrane amino acid tran 2e-81
>gnl|CDD|215559 PLN03074, PLN03074, auxin influx permease; Provisional Back     alignment and domain information 
 Score =  937 bits (2425), Expect = 0.0
 Identities = 403/473 (85%), Positives = 433/473 (91%), Gaps = 2/473 (0%)

Query: 1   MISEKQADEEMVSSLNESE--SQEKEEQIKQDDSKFGLKSLLWHGGSVYDAWFSCASNQV 58
           M++ KQA+  +V +  E E     ++E+      K  LKSLLWHGGSVYDAWFSCASNQV
Sbjct: 1   MMAGKQAETAIVGNYVEMEVEGGGEKEEGGGGGGKSRLKSLLWHGGSVYDAWFSCASNQV 60

Query: 59  AQVLLTLPYSFSQLGMLSGIILQIFYGIMGSWTAYLISVLYVEYRSRKEKENVSFKNHVI 118
           AQVLLTLPYSFSQLGMLSGI+ QIFYG++GSWTAYLISVLYVEYR+RKE+E V FKNHVI
Sbjct: 61  AQVLLTLPYSFSQLGMLSGILFQIFYGLLGSWTAYLISVLYVEYRARKEREKVDFKNHVI 120

Query: 119 QWFEVLDGLLGPYWKAVGLAFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGAC 178
           QWFEVLDGLLGPYWK VGLAFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGAC
Sbjct: 121 QWFEVLDGLLGPYWKNVGLAFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGAC 180

Query: 179 CATTVFIPSFHNYRLWSFLGLGMTTYTAWYLTIAAFVHGQVDGVTHSGPSTLVLYFTGAT 238
           CATTVFIPSFHNYR+WSFLGL MTTYTAWY+TIAA  HGQV+GV HSGP+ LVLYFTGAT
Sbjct: 181 CATTVFIPSFHNYRIWSFLGLLMTTYTAWYMTIAALSHGQVEGVKHSGPTKLVLYFTGAT 240

Query: 239 NILYTFGGHAVTVEIMHAMWKPQKFKSIYLLATLYVFTLTIPSAAAVYWAFGDQLLTHSN 298
           NILYTFGGHAVTVEIMHAMWKPQKFK IYL ATLYV TLT+PSAAAVYWAFGD+LLTHSN
Sbjct: 241 NILYTFGGHAVTVEIMHAMWKPQKFKYIYLAATLYVLTLTLPSAAAVYWAFGDELLTHSN 300

Query: 299 AFSLLPRSRWRDVAVILMLIHQFITFGFACTPLYFVWEKVVGMHDTKSICLRALARLPVV 358
           AFSLLPRS WRD AVILMLIHQFITFGFACTPLYFVWEK +G+HDTKSICLRALARLPVV
Sbjct: 301 AFSLLPRSGWRDAAVILMLIHQFITFGFACTPLYFVWEKAIGVHDTKSICLRALARLPVV 360

Query: 359 IPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPALAHMLTYRSASARQNSAEKLPFFLPS 418
           +PIWFLAIIFPFFGPINSAVGALLVSFTVYIIP+LAHMLTYRSASARQN+AEK PFFLPS
Sbjct: 361 VPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPSLAHMLTYRSASARQNAAEKPPFFLPS 420

Query: 419 WTAMYVVNTFILVWVLVVGFGLGGWASMTNFIKQVDTFGLFAKCYQCPPPASA 471
           WT MYVVN F++VWVLVVGFG GGWASMTNF++Q+DTFGLFAKCYQCPPP+ A
Sbjct: 421 WTGMYVVNAFVVVWVLVVGFGFGGWASMTNFVRQIDTFGLFAKCYQCPPPSPA 473

Length = 473
>gnl|CDD|216528 pfam01490, Aa_trans, Transmembrane amino acid transporter protein Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 474
PLN03074473 auxin influx permease; Provisional 100.0
KOG1304449 consensus Amino acid transporters [Amino acid tran 100.0
KOG1303437 consensus Amino acid transporters [Amino acid tran 100.0
PTZ00206467 amino acid transporter; Provisional 100.0
PF01490409 Aa_trans: Transmembrane amino acid transporter pro 100.0
KOG4303524 consensus Vesicular inhibitory amino acid transpor 100.0
KOG1305411 consensus Amino acid transporter protein [Amino ac 100.0
COG0814415 SdaC Amino acid permeases [Amino acid transport an 100.0
PRK10483414 tryptophan permease; Provisional 99.93
PF03222394 Trp_Tyr_perm: Tryptophan/tyrosine permease family; 99.92
PRK09664415 tryptophan permease TnaB; Provisional 99.91
PRK15132403 tyrosine transporter TyrP; Provisional 99.9
TIGR00837381 araaP aromatic amino acid transport protein. aroma 99.89
PRK13629443 threonine/serine transporter TdcC; Provisional 99.83
TIGR00814397 stp serine transporter. The HAAAP family includes 99.74
TIGR00912359 2A0309 spore germination protein (amino acid perme 99.38
PRK10249458 phenylalanine transporter; Provisional 99.37
PRK15049499 L-asparagine permease; Provisional 99.29
TIGR00909429 2A0306 amino acid transporter. 99.27
PRK10746461 putative transport protein YifK; Provisional 99.27
TIGR01773452 GABAperm gamma-aminobutyrate permease. GabP is hig 99.25
PRK10655438 potE putrescine transporter; Provisional 99.21
PRK11049469 D-alanine/D-serine/glycine permease; Provisional 99.2
PRK10238456 aromatic amino acid transporter; Provisional 99.2
PRK10580457 proY putative proline-specific permease; Provision 99.15
PRK10644445 arginine:agmatin antiporter; Provisional 99.12
PRK11387471 S-methylmethionine transporter; Provisional 99.11
PRK11021410 putative transporter; Provisional 99.1
PRK10435435 cadB lysine/cadaverine antiporter; Provisional 99.09
TIGR00913478 2A0310 amino acid permease (yeast). 99.09
TIGR00905473 2A0302 transporter, basic amino acid/polyamine ant 99.07
PRK10836489 lysine transporter; Provisional 99.06
KOG3832319 consensus Predicted amino acid transporter [Genera 99.03
TIGR00906557 2A0303 cationic amino acid transport permease. 99.03
PRK10197446 gamma-aminobutyrate transporter; Provisional 99.03
TIGR00930 953 2a30 K-Cl cotransporter. 99.02
TIGR03810468 arg_ornith_anti arginine/ornithine antiporter. Mem 99.0
PF03845320 Spore_permease: Spore germination protein; InterPr 99.0
TIGR00908442 2A0305 ethanolamine permease. The three genes used 98.97
COG1113462 AnsP Gamma-aminobutyrate permease and related perm 98.91
PF13520426 AA_permease_2: Amino acid permease; PDB: 3NCY_A 3G 98.9
TIGR00911501 2A0308 L-type amino acid transporter. 98.85
KOG1287479 consensus Amino acid transporters [Amino acid tran 98.77
TIGR03428475 ureacarb_perm permease, urea carboxylase system. A 98.66
PRK11357445 frlA putative fructoselysine transporter; Provisio 98.6
COG0531466 PotE Amino acid transporters [Amino acid transport 98.57
COG0833541 LysP Amino acid transporters [Amino acid transport 98.49
PRK11375484 allantoin permease; Provisional 98.3
TIGR00907482 2A0304 amino acid permease (GABA permease). 98.3
KOG1286554 consensus Amino acid transporters [Amino acid tran 98.29
PRK15238496 inner membrane transporter YjeM; Provisional 98.29
COG1457442 CodB Purine-cytosine permease and related proteins 98.26
PF00324478 AA_permease: Amino acid permease; InterPro: IPR004 98.15
TIGR03813474 put_Glu_GABA_T putative glutamate/gamma-aminobutyr 98.13
KOG1289550 consensus Amino acid transporters [Amino acid tran 98.12
TIGR00800442 ncs1 NCS1 nucleoside transporter family. The NCS1 98.03
TIGR00910507 2A0307_GadC glutamate:gamma-aminobutyrate antiport 97.79
TIGR02358386 thia_cytX probable hydroxymethylpyrimidine transpo 97.79
COG3949349 Uncharacterized membrane protein [Function unknown 97.55
PRK11017404 codB cytosine permease; Provisional 97.5
TIGR00796378 livcs branched-chain amino acid uptake carrier. tr 96.81
PF00474406 SSF: Sodium:solute symporter family; InterPro: IPR 96.74
PRK12488549 acetate permease; Provisional 96.72
COG0591493 PutP Na+/proline symporter [Amino acid transport a 96.52
TIGR00813407 sss transporter, SSS family. have different number 96.44
PF02133440 Transp_cyt_pur: Permease for cytosine/purines, ura 96.32
COG1953497 FUI1 Cytosine/uracil/thiamine/allantoin permeases 96.07
PRK09442483 panF sodium/panthothenate symporter; Provisional 96.0
TIGR02119471 panF sodium/pantothenate symporter. Pantothenate ( 95.9
TIGR02711549 symport_actP cation/acetate symporter ActP. Member 94.69
PRK15419502 proline:sodium symporter PutP; Provisional 94.68
PF02554376 CstA: Carbon starvation protein CstA; InterPro: IP 94.63
TIGR00835425 agcS amino acid carrier protein. Members of the AG 94.45
PF01566358 Nramp: Natural resistance-associated macrophage pr 93.9
COG0733439 Na+-dependent transporters of the SNF family [Gene 93.78
COG1914416 MntH Mn2+ and Fe2+ transporters of the NRAMP famil 93.14
PRK09395551 actP acetate permease; Provisional 92.49
COG4147529 DhlC Predicted symporter [General function predict 91.23
PF01235416 Na_Ala_symp: Sodium:alanine symporter family; Inte 90.81
TIGR02121487 Na_Pro_sym sodium/proline symporter. This family c 90.1
PRK15015 701 carbon starvation protein A; Provisional 89.74
PRK00701439 manganese transport protein MntH; Reviewed 88.02
TIGR03648552 Na_symport_lg probable sodium:solute symporter, VC 86.91
COG1966 575 CstA Carbon starvation protein, predicted membrane 86.87
>PLN03074 auxin influx permease; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.2e-72  Score=579.69  Aligned_cols=470  Identities=86%  Similarity=1.455  Sum_probs=412.1

Q ss_pred             CccccchhhHHHhhhccccch--hhhhhhcccccccccccccccCCchHHHHHHHHHhhhhhhhchhHHHHHhcchhHHH
Q 011966            1 MISEKQADEEMVSSLNESESQ--EKEEQIKQDDSKFGLKSLLWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGI   78 (474)
Q Consensus         1 m~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~s~~~a~~~l~~~~iG~GiLsLP~af~~~G~~~g~   78 (474)
                      |.+++++++....+.+|.|.+  .+.+....++.+.++|+..||++|.+++++|+++..+|+|+|+||+||+++||++|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~vG~GILaLP~Af~~~G~v~Gi   80 (473)
T PLN03074          1 MMAGKQAETAIVGNYVEMEVEGGGEKEEGGGGGGKSRLKSLLWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGI   80 (473)
T ss_pred             CCCccccchhHhhccchhccccccccccCCCCCCceeeeecccCCchHHHHHHHHHHHHHhHHHHhHHHHHHHccHHHHH
Confidence            456666666655444444432  112222235667788999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccccccccHHHHHHhhcCccchhhhHhhHHHHHHHHHHHHHHhhccc
Q 011966           79 ILQIFYGIMGSWTAYLISVLYVEYRSRKEKENVSFKNHVIQWFEVLDGLLGPYWKAVGLAFNCTFLLFGSVIQLIACASN  158 (474)
Q Consensus        79 i~l~~~~~~s~~s~~ll~~~~~~~~~~~~~~~~~~~~~~~~y~~l~~~~~G~~~~~~~~~~~~~~~~g~~~~yli~~~~~  158 (474)
                      ++++++++++.||++++.+++.+++++++.++.++++++.+|.|+++..+||+++.+..+++++++++.++.|++.++++
T Consensus        81 i~lv~~~~l~~Yt~~lL~~~~~~~~~r~~~~~~~~~~~~~~~~e~~~~~~G~~~~~~~~~~~~v~l~~~~v~~li~~~~~  160 (473)
T PLN03074         81 LFQIFYGLLGSWTAYLISVLYVEYRARKEREKVDFKNHVIQWFEVLDGLLGPYWKNVGLAFNCTFLLFGSVIQLIACASN  160 (473)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhccCcCCCchhHHHHHHHHHHHHhcChhHHHHHHHHHhhhhHHHHHHHHHHHhhh
Confidence            99999999999999999999888887766666778887778999999999999999999999999999999999988888


Q ss_pred             ccccccccCcchhhhhhhHHHhhhcccCCCCCchHHHHHHHHHHHHHHHHhhhhhhhcCCCCCCCcCCCchHHHHHHHHH
Q 011966          159 IYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRLWSFLGLGMTTYTAWYLTIAAFVHGQVDGVTHSGPSTLVLYFTGAT  238 (474)
Q Consensus       159 ~~~~~~~~~~~~~~~i~~~i~~pl~~~~~l~~l~~~s~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  238 (474)
                      ++.+++..+.+.|+++++++++|++++|++++++++|.+|+.++++.++++++.++.++..++.++..+.++..++.+++
T Consensus       161 ~~~l~~~~~~~~~~~i~~~v~~~~~~i~sl~~l~~~S~ig~~~tl~~av~i~i~~i~~~~~~~~~~~~~~~~~~~f~~~~  240 (473)
T PLN03074        161 IYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLLMTTYTAWYMTIAALSHGQVEGVKHSGPTKLVLYFTGAT  240 (473)
T ss_pred             hhhhCCCcCCCeEEeehHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCchhHHHHHHHHH
Confidence            87788888999999999999999999999999999999999987776666666666666656665555567788888899


Q ss_pred             HHHHHhcCceehhhhhhhccCCccchHHHHHHHHHHHHHHHhhHhHHHHhhccccccccccccCCCCchHHHHHHHHHHH
Q 011966          239 NILYTFGGHAVTVEIMHAMWKPQKFKSIYLLATLYVFTLTIPSAAAVYWAFGDQLLTHSNAFSLLPRSRWRDVAVILMLI  318 (474)
Q Consensus       239 i~~faf~~h~~~~~i~~~mk~p~~~~~~~~~s~~~~~~~y~~~gi~Gy~~fG~~~~~~~~il~~l~~~~~~~i~~i~~~i  318 (474)
                      +++|||++|.++|+++++||+|++|+++..+++.+++++|+.+|+.||++|||++.+++++++|+|++.+..++++++++
T Consensus       241 ~i~faf~g~~v~~~I~~~M~~P~~F~~~~~l~~~~v~~~y~~~~~~gY~~fG~~~~~~s~~l~~lp~~~~~~~~~~~~~i  320 (473)
T PLN03074        241 NILYTFGGHAVTVEIMHAMWKPQKFKYIYLAATLYVLTLTLPSAAAVYWAFGDELLTHSNAFSLLPRSGWRDAAVILMLI  320 (473)
T ss_pred             HHHHHhcccccHHHHHHhccChhcccchHHHHHHHHHHHHHHHHHeeeeeechhhhhchhHHhcCCCchHHHHHHHHHHH
Confidence            99999999999999999999999999998899999999999999999999999985456788889977778999999999


Q ss_pred             HHHHhhhhhhhhHHHHHHHHHcCCCCccchhhhhhhHhHHHHHHHHHHhcCCchhHHHhhhhHHHhhHHHhhhHHHHHHH
Q 011966          319 HQFITFGFACTPLYFVWEKVVGMHDTKSICLRALARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPALAHMLT  398 (474)
Q Consensus       319 ~l~~s~pl~~~p~~~~~~~~~~~~~~~~~~~~~~~r~~~v~~~~~iA~~ip~~~~i~~lvGa~~~~~l~filP~l~~l~~  398 (474)
                      +++.+||+++.|+.+.+|+..+.++++....|+.+|+.+++.++++|+.+|+|+++++++||++++.++|++|+++|+++
T Consensus       321 ~~~~sy~l~~~p~~~~~e~~~~~~~~k~~~~r~~~R~~lv~~~~~iA~~IP~fg~llsLvGs~~~s~l~~i~P~l~~l~~  400 (473)
T PLN03074        321 HQFITFGFACTPLYFVWEKAIGVHDTKSICLRALARLPVVVPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPSLAHMLT  400 (473)
T ss_pred             HHHHHHHHHHhhHHHHHHHHhcccccccHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999998875555566779999999999999999999999999999999999999999999999999


Q ss_pred             hcchhhhccccCCCCcccccchhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhccccccccccCCCCCCC
Q 011966          399 YRSASARQNSAEKLPFFLPSWTAMYVVNTFILVWVLVVGFGLGGWASMTNFIKQVDTFGLFAKCYQCPPPAS  470 (474)
Q Consensus       399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~g~~~~v~Gt~~si~~ii~~~~~~~~~~~~~~~~~~~~  470 (474)
                      ++++..|++..|+|++..++|.++.++|+++++++++++++.|+|+|+++|+++++++++|++||+||+|+-
T Consensus       401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~iiv~~~~~g~~~G~~asi~~ii~~~~~~~~f~~~~~c~~~~~  472 (473)
T PLN03074        401 YRSASARQNAAEKPPFFLPSWTGMYVVNAFVVVWVLVVGFGFGGWASMTNFVRQIDTFGLFAKCYQCPPPSP  472 (473)
T ss_pred             hcchhhhhhcccCCcccCCccceehhhhhHHHHhhhhHhhccchHHHHHHHHHhhhhhhhhhhhccCCCCCC
Confidence            888777777888888766677777899999999889998889999999999999999999999999999864

>KOG1304 consensus Amino acid transporters [Amino acid transport and metabolism] Back     alignment and domain information
>KOG1303 consensus Amino acid transporters [Amino acid transport and metabolism] Back     alignment and domain information
>PTZ00206 amino acid transporter; Provisional Back     alignment and domain information
>PF01490 Aa_trans: Transmembrane amino acid transporter protein; InterPro: IPR013057 This transmembrane region is found in many amino acid transporters including P34579 from SWISSPROT (UNC-47) and P40501 from SWISSPROT (MTR) Back     alignment and domain information
>KOG4303 consensus Vesicular inhibitory amino acid transporter [Amino acid transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>KOG1305 consensus Amino acid transporter protein [Amino acid transport and metabolism] Back     alignment and domain information
>COG0814 SdaC Amino acid permeases [Amino acid transport and metabolism] Back     alignment and domain information
>PRK10483 tryptophan permease; Provisional Back     alignment and domain information
>PF03222 Trp_Tyr_perm: Tryptophan/tyrosine permease family; InterPro: IPR018227 Amino acid permeases are integral membrane proteins involved in the transport of amino acids into the cell Back     alignment and domain information
>PRK09664 tryptophan permease TnaB; Provisional Back     alignment and domain information
>PRK15132 tyrosine transporter TyrP; Provisional Back     alignment and domain information
>TIGR00837 araaP aromatic amino acid transport protein Back     alignment and domain information
>PRK13629 threonine/serine transporter TdcC; Provisional Back     alignment and domain information
>TIGR00814 stp serine transporter Back     alignment and domain information
>TIGR00912 2A0309 spore germination protein (amino acid permease) Back     alignment and domain information
>PRK10249 phenylalanine transporter; Provisional Back     alignment and domain information
>PRK15049 L-asparagine permease; Provisional Back     alignment and domain information
>TIGR00909 2A0306 amino acid transporter Back     alignment and domain information
>PRK10746 putative transport protein YifK; Provisional Back     alignment and domain information
>TIGR01773 GABAperm gamma-aminobutyrate permease Back     alignment and domain information
>PRK10655 potE putrescine transporter; Provisional Back     alignment and domain information
>PRK11049 D-alanine/D-serine/glycine permease; Provisional Back     alignment and domain information
>PRK10238 aromatic amino acid transporter; Provisional Back     alignment and domain information
>PRK10580 proY putative proline-specific permease; Provisional Back     alignment and domain information
>PRK10644 arginine:agmatin antiporter; Provisional Back     alignment and domain information
>PRK11387 S-methylmethionine transporter; Provisional Back     alignment and domain information
>PRK11021 putative transporter; Provisional Back     alignment and domain information
>PRK10435 cadB lysine/cadaverine antiporter; Provisional Back     alignment and domain information
>TIGR00913 2A0310 amino acid permease (yeast) Back     alignment and domain information
>TIGR00905 2A0302 transporter, basic amino acid/polyamine antiporter (APA) family Back     alignment and domain information
>PRK10836 lysine transporter; Provisional Back     alignment and domain information
>KOG3832 consensus Predicted amino acid transporter [General function prediction only] Back     alignment and domain information
>TIGR00906 2A0303 cationic amino acid transport permease Back     alignment and domain information
>PRK10197 gamma-aminobutyrate transporter; Provisional Back     alignment and domain information
>TIGR00930 2a30 K-Cl cotransporter Back     alignment and domain information
>TIGR03810 arg_ornith_anti arginine/ornithine antiporter Back     alignment and domain information
>PF03845 Spore_permease: Spore germination protein; InterPro: IPR004761 Amino acid permeases are integral membrane proteins involved in the transport of amino acids into the cell Back     alignment and domain information
>TIGR00908 2A0305 ethanolamine permease Back     alignment and domain information
>COG1113 AnsP Gamma-aminobutyrate permease and related permeases [Amino acid transport and metabolism] Back     alignment and domain information
>PF13520 AA_permease_2: Amino acid permease; PDB: 3NCY_A 3GI8_C 3GIA_A 3GI9_C 3OB6_A 3L1L_A 3LRC_D 3LRB_B 4DJK_A 4DJI_A Back     alignment and domain information
>TIGR00911 2A0308 L-type amino acid transporter Back     alignment and domain information
>KOG1287 consensus Amino acid transporters [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR03428 ureacarb_perm permease, urea carboxylase system Back     alignment and domain information
>PRK11357 frlA putative fructoselysine transporter; Provisional Back     alignment and domain information
>COG0531 PotE Amino acid transporters [Amino acid transport and metabolism] Back     alignment and domain information
>COG0833 LysP Amino acid transporters [Amino acid transport and metabolism] Back     alignment and domain information
>PRK11375 allantoin permease; Provisional Back     alignment and domain information
>TIGR00907 2A0304 amino acid permease (GABA permease) Back     alignment and domain information
>KOG1286 consensus Amino acid transporters [Amino acid transport and metabolism] Back     alignment and domain information
>PRK15238 inner membrane transporter YjeM; Provisional Back     alignment and domain information
>COG1457 CodB Purine-cytosine permease and related proteins [Nucleotide transport and metabolism] Back     alignment and domain information
>PF00324 AA_permease: Amino acid permease; InterPro: IPR004841 Amino acid permeases are integral membrane proteins involved in the transport of amino acids into the cell Back     alignment and domain information
>TIGR03813 put_Glu_GABA_T putative glutamate/gamma-aminobutyrate antiporter Back     alignment and domain information
>KOG1289 consensus Amino acid transporters [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR00800 ncs1 NCS1 nucleoside transporter family Back     alignment and domain information
>TIGR00910 2A0307_GadC glutamate:gamma-aminobutyrate antiporter Back     alignment and domain information
>TIGR02358 thia_cytX probable hydroxymethylpyrimidine transporter CytX Back     alignment and domain information
>COG3949 Uncharacterized membrane protein [Function unknown] Back     alignment and domain information
>PRK11017 codB cytosine permease; Provisional Back     alignment and domain information
>TIGR00796 livcs branched-chain amino acid uptake carrier Back     alignment and domain information
>PF00474 SSF: Sodium:solute symporter family; InterPro: IPR001734 Sodium/substrate symport (or co-transport) is a widespread mechanism of solute transport across cytoplasmic membranes of pro- and eukaryotic cells Back     alignment and domain information
>PRK12488 acetate permease; Provisional Back     alignment and domain information
>COG0591 PutP Na+/proline symporter [Amino acid transport and metabolism / General function prediction only] Back     alignment and domain information
>TIGR00813 sss transporter, SSS family Back     alignment and domain information
>PF02133 Transp_cyt_pur: Permease for cytosine/purines, uracil, thiamine, allantoin; InterPro: IPR001248 The Nucleobase Cation Symporter-1 (NCS1) family consists of bacterial and yeast transporters for nucleobases including purines and pyrimidines Back     alignment and domain information
>COG1953 FUI1 Cytosine/uracil/thiamine/allantoin permeases [Nucleotide transport and metabolism / Coenzyme metabolism] Back     alignment and domain information
>PRK09442 panF sodium/panthothenate symporter; Provisional Back     alignment and domain information
>TIGR02119 panF sodium/pantothenate symporter Back     alignment and domain information
>TIGR02711 symport_actP cation/acetate symporter ActP Back     alignment and domain information
>PRK15419 proline:sodium symporter PutP; Provisional Back     alignment and domain information
>PF02554 CstA: Carbon starvation protein CstA; InterPro: IPR003706 Escherichia coli induces the synthesis of at least 30 proteins at the onset of carbon starvation, two-thirds of which are positively regulated by the cyclic AMP (cAMP) and cAMP receptor protein (CRP) complex Back     alignment and domain information
>TIGR00835 agcS amino acid carrier protein Back     alignment and domain information
>PF01566 Nramp: Natural resistance-associated macrophage protein; InterPro: IPR001046 The natural resistance-associated macrophage protein (NRAMP) family consists of Nramp1, Nramp2, and yeast proteins Smf1 and Smf2 Back     alignment and domain information
>COG0733 Na+-dependent transporters of the SNF family [General function prediction only] Back     alignment and domain information
>COG1914 MntH Mn2+ and Fe2+ transporters of the NRAMP family [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK09395 actP acetate permease; Provisional Back     alignment and domain information
>COG4147 DhlC Predicted symporter [General function prediction only] Back     alignment and domain information
>PF01235 Na_Ala_symp: Sodium:alanine symporter family; InterPro: IPR001463 Sodium symporters can be divided by sequence and functional similarity into various groups Back     alignment and domain information
>TIGR02121 Na_Pro_sym sodium/proline symporter Back     alignment and domain information
>PRK15015 carbon starvation protein A; Provisional Back     alignment and domain information
>PRK00701 manganese transport protein MntH; Reviewed Back     alignment and domain information
>TIGR03648 Na_symport_lg probable sodium:solute symporter, VC_2705 subfamily Back     alignment and domain information
>COG1966 CstA Carbon starvation protein, predicted membrane protein [Signal transduction mechanisms] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query474
3l1l_A445 Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC 99.46
3gia_A444 Uncharacterized protein MJ0609; membrane protein, 99.2
4djk_A511 Probable glutamate/gamma-aminobutyrate antiporter; 98.89
2jln_A501 MHP1; hydantoin, transporter, membrane protein, nu 98.26
3dh4_A530 Sodium/glucose cotransporter; membrane protein, sy 97.16
2xq2_A 593 Sodium/glucose cotransporter; transport protein, i 94.16
>3l1l_A Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC, Arg-bound, amino-acid transport, cell inner membrane, cell membrane, membrane; HET: ARG BNG; 3.00A {Escherichia coli} PDB: 3h5m_A* 3h6b_A 3lrb_A 3lrc_A 3ob6_A* 3hqk_A 3ncy_A Back     alignment and structure
Probab=99.46  E-value=6.8e-11  Score=120.96  Aligned_cols=238  Identities=10%  Similarity=0.010  Sum_probs=134.2

Q ss_pred             cCCchHHHHHHHHHhhhhhhhchhHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccccccccHH
Q 011966           42 HGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGIILQIFYGIMGSWTAYLISVLYVEYRSRKEKENVSFKNHVIQWF  121 (474)
Q Consensus        42 ~~~s~~~a~~~l~~~~iG~GiLsLP~af~~~G~~~g~i~l~~~~~~s~~s~~ll~~~~~~~~~~~~~~~~~~~~~~~~y~  121 (474)
                      ++-+.++.+...+.+++|+|++.+|....+.|.. +++..++.++..........+...++++.         .   ...
T Consensus         8 r~l~~~~~~~l~ig~~iG~Gif~~~~~~~~~G~~-~~~~~li~~~~~~~~a~~~~el~~~~p~~---------G---g~y   74 (445)
T 3l1l_A            8 HKVGLIPVTLMVSGAIMGSGVFLLPANLASTGGI-AIYGWLVTIIGALGLSMVYAKMSFLDPSP---------G---GSY   74 (445)
T ss_dssp             CCBCHHHHHHHHHHHHCSSHHHHHHHHHHHHCTH-HHHHHHHHHHHHHHHHHHHHHHHHHCCCT---------T---THH
T ss_pred             CcccHHHHHHHHHHhHHhhhHHhhHHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHccCCCC---------C---Cch
Confidence            3457889999999999999999999999888864 67777777777666665555443333211         0   244


Q ss_pred             HHHHhhcCccchhhhHhhHHHHHHHHHHHHHHhhcccccccccccCcchhhhhhhH-HHhh--hcccCCCCCchHHHHHH
Q 011966          122 EVLDGLLGPYWKAVGLAFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGA-CCAT--TVFIPSFHNYRLWSFLG  198 (474)
Q Consensus       122 ~l~~~~~G~~~~~~~~~~~~~~~~g~~~~yli~~~~~~~~~~~~~~~~~~~~i~~~-i~~p--l~~~~~l~~l~~~s~~~  198 (474)
                      +..++.+||....+...............+....++.+....+..+......+.+. +++.  ..-.+..+...++..+.
T Consensus        75 ~~~~~~~G~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~g~~~~~~~~~~~  154 (445)
T 3l1l_A           75 AYARRCFGPFLGYQTNVLYWLACWIGNIAMVVIGVGYLSYFFPILKDPWVLTITCVVVLWIFVLLNIVGPKMITRVQAVA  154 (445)
T ss_dssp             HHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCGGGGSHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred             hhHHhHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccccccHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHH
Confidence            55677899988776655544443333333433333333222222222211111111 1111  11122333333333332


Q ss_pred             HHHHHHHHHHhhhhhhhcCCCCCC----CcCCCchHHHHHHHHHHHHHHhcCceehhhhhhhccCCcc-chHHHHHHHHH
Q 011966          199 LGMTTYTAWYLTIAAFVHGQVDGV----THSGPSTLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQK-FKSIYLLATLY  273 (474)
Q Consensus       199 ~~~~~~~~~~i~~~~~~~g~~~~~----~~~~~~~~~~~~~~~~i~~faf~~h~~~~~i~~~mk~p~~-~~~~~~~s~~~  273 (474)
                      ....+...+.+++......+.++.    +.....++.+++.++....|+|.|........+|+|||+| .++....+..+
T Consensus       155 ~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~af~G~e~~~~~~~e~k~p~r~ip~a~~~~~~~  234 (445)
T 3l1l_A          155 TVLALIPIVGIAVFGWFWFRGETYMAAWNVSGLGTFGAIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLI  234 (445)
T ss_dssp             HHHHHHHHHHHHHTTSTTCCCCCCCCC-----------HHHHHHHHHHTTTTTTHHHHGGGGBSSHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhChhhcccccCccCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCccccccHHHHHHHHH
Confidence            222221111122222222111111    1111123557788889999999999999999999999966 58889999999


Q ss_pred             HHHHHHhhHhHHHHhhccc
Q 011966          274 VFTLTIPSAAAVYWAFGDQ  292 (474)
Q Consensus       274 ~~~~y~~~gi~Gy~~fG~~  292 (474)
                      +.++|+...+......+.+
T Consensus       235 ~~~~y~~~~~~~~~~~~~~  253 (445)
T 3l1l_A          235 AAVCYVLSTTAIMGMIPNA  253 (445)
T ss_dssp             HHHHHHHHHHHHHHHSCTT
T ss_pred             HHHHHHHHHHHHHhcCCHH
Confidence            9999988877766666543
>3gia_A Uncharacterized protein MJ0609; membrane protein, transporter, cell membrane, membrane, transmembrane, transport protein; HET: D10 BCN; 2.32A {Methanocaldococcus jannaschii} PDB: 3gi9_C* 3gi8_C Back     alignment and structure
>4djk_A Probable glutamate/gamma-aminobutyrate antiporter; LEUT, glutamate-GABA antiporter, transport protein; 3.10A {Escherichia coli} PDB: 4dji_A Back     alignment and structure
>2jln_A MHP1; hydantoin, transporter, membrane protein, nucleobase-cation-symport-1 family; 2.85A {Microbacterium liquefaciens} PDB: 2jlo_A* 2x79_A Back     alignment and structure
>3dh4_A Sodium/glucose cotransporter; membrane protein, symporter, sugar transport, SGLT, ION TRAN membrane, sodium transport, symport; HET: GAL; 2.70A {Vibrio parahaemolyticus} Back     alignment and structure
>2xq2_A Sodium/glucose cotransporter; transport protein, inverted repeats, LEUT-fold, galactose; 2.73A {Vibrio parahaemolyticus} PDB: 2xq2_B 2kpe_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00