Citrus Sinensis ID: 011969
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 474 | 2.2.26 [Sep-21-2011] | |||||||
| Q9BT22 | 464 | Chitobiosyldiphosphodolic | yes | no | 0.909 | 0.928 | 0.424 | 4e-92 | |
| Q921Q3 | 482 | Chitobiosyldiphosphodolic | yes | no | 0.915 | 0.900 | 0.422 | 5e-92 | |
| Q5R7A2 | 464 | Chitobiosyldiphosphodolic | yes | no | 0.915 | 0.935 | 0.421 | 3e-91 | |
| P90522 | 493 | Chitobiosyldiphosphodolic | yes | no | 0.845 | 0.813 | 0.392 | 1e-80 | |
| O13933 | 424 | Chitobiosyldiphosphodolic | yes | no | 0.824 | 0.922 | 0.376 | 6e-71 | |
| Q6C3K2 | 463 | Chitobiosyldiphosphodolic | yes | no | 0.843 | 0.863 | 0.366 | 1e-67 | |
| Q59Q79 | 456 | Chitobiosyldiphosphodolic | N/A | no | 0.820 | 0.853 | 0.326 | 9e-59 | |
| P16661 | 449 | Chitobiosyldiphosphodolic | yes | no | 0.848 | 0.895 | 0.340 | 4e-58 | |
| Q6CVU2 | 447 | Chitobiosyldiphosphodolic | yes | no | 0.820 | 0.870 | 0.331 | 2e-56 | |
| Q75BA5 | 471 | Chitobiosyldiphosphodolic | yes | no | 0.824 | 0.830 | 0.339 | 1e-55 |
| >sp|Q9BT22|ALG1_HUMAN Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Homo sapiens GN=ALG1 PE=1 SV=2 | Back alignment and function desciption |
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Score = 338 bits (868), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 201/473 (42%), Positives = 273/473 (57%), Gaps = 42/473 (8%)
Query: 3 RRGRAC----VVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHI 58
RRGRA VVLGD+GRSPRMQY ALSLA V ++ + SKPH +L++ I I
Sbjct: 27 RRGRAARHVVAVVLGDVGRSPRMQYHALSLAMH-GFSVTLLGFCNSKPHDELLQNNRIQI 85
Query: 59 HTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVA 118
+T+ ++ G P+V + +K ++Q LLW L + +FL QNPP +P++
Sbjct: 86 VGLTELQSLAVG-PRVFQ---YGVKVVLQAMYLLWKLMWREPGAYIFL-QNPPGLPSIAV 140
Query: 119 VKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178
+ L S ++DWHN+GY+++ L G V + +W EK++G++++ LCVT AM+
Sbjct: 141 CWFVGCLCGSKLVIDWHNYGYSIMGLVHGPNHPLVLLAKWYEKFFGRLSHLNLCVTNAMR 200
Query: 179 HELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQK 238
+LA NW I+A +YD+P FF T L+ +H LF +L +H P + + E
Sbjct: 201 EDLADNWHIRAVTVYDKPASFFKETPLDLQHRLFMKLGS-MHSPFRAR-----SEPEDPV 254
Query: 239 ADETIFT---SLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNED 295
+ + FT + +G+ L+ RPAL+VSSTSWT DEDF ILL A
Sbjct: 255 TERSAFTERDAGSGLVTRLR-ERPALLVSSTSWTEDEDFSILLAAL-------------- 299
Query: 296 DSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAED 355
E F + DG P L+ +ITGKGP +E Y I + + + T WL AED
Sbjct: 300 -----EKFEQLTLDGHNL--PSLVCVITGKGPLREYYSRLIHQKHFQHIQVCTPWLEAED 352
Query: 356 YPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSS 415
YPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGC LPVCAV++ C+ ELVK ++NGL+F
Sbjct: 353 YPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCCLPVCAVNFKCLHELVKHEENGLVFED 412
Query: 416 SSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEV 468
S ELA QL MLF FPD + L + R L RW W + PL+ +
Sbjct: 413 SEELAAQLQMLFSNFPDPAGKLNQFRK-NLRESQQLRWDESWVQTVLPLVMDT 464
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Participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. Involved in assembling the dolichol-pyrophosphate-GlcNAc(2)-Man(5) intermediate on the cytoplasmic surface of the ER. Homo sapiens (taxid: 9606) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 4EC: 2 |
| >sp|Q921Q3|ALG1_MOUSE Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Mus musculus GN=Alg1 PE=2 SV=3 | Back alignment and function description |
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Score = 338 bits (867), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 197/466 (42%), Positives = 270/466 (57%), Gaps = 32/466 (6%)
Query: 2 GRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTM 61
GR VVVLGD+GRSPRMQY ALSLA Q V ++ + SKP +L++ I I +
Sbjct: 30 GRARHMVVVVLGDVGRSPRMQYHALSLA-QSGFSVTLLGFYNSKPRDELLQNDRIRIVKL 88
Query: 62 TQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKW 121
T + G P++L+ +K + Q LLW + + +FL QNPP +P + +
Sbjct: 89 TDLRGLGAG-PRILQ---YGVKVVFQAVYLLWKMMRMDPAAYIFL-QNPPGLPAIAVCWF 143
Query: 122 ASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHEL 181
+ S ++DWHN+GY+++ L G R V + +W EK++G++++ LCVT AM+ +L
Sbjct: 144 VGCICGSKLVIDWHNYGYSIMGLVHGPRHPIVLLAKWYEKFFGRLSHLNLCVTNAMREDL 203
Query: 182 AQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADE 241
A+NW ++A LYD+P FF T L+ +HELF +L+ H Q C + + +++
Sbjct: 204 AENWCVRAVTLYDKPASFFKETPLDLQHELFMKLS---HTYSPFQSCSDPSHPDTERSAF 260
Query: 242 TIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEE 301
T +G+ L RPAL+VSSTSWT DEDF ILL A ++++ L D
Sbjct: 261 TERDCQSGVVRRLH-GRPALLVSSTSWTEDEDFSILLRALEKFEQQA---LTGDS----- 311
Query: 302 VFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLG 361
P L+ +ITGKGP +E Y I + L+ V F T WL AEDYPLLLG
Sbjct: 312 -------------LPSLVCVITGKGPLREHYRHLISQKHLQHVRFCTPWLEAEDYPLLLG 358
Query: 362 SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELAD 421
SADLGVCLH SSSGLDLPMKVVDMFGC LPVCAV++ C+ ELV+ +NGL+F + ELA
Sbjct: 359 SADLGVCLHMSSSGLDLPMKVVDMFGCHLPVCAVNFKCLHELVRHGENGLVFKDAEELAA 418
Query: 422 QLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITE 467
QL MLF FPD + L + R E G RW W+ PL+
Sbjct: 419 QLQMLFSKFPDPAGKLSQFRKKLQESG-QQRWDESWQHTVLPLLAH 463
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Participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. Involved in assembling the dolichol-pyrophosphate-GlcNAc(2)-Man(5) intermediate on the cytoplasmic surface of the ER. Mus musculus (taxid: 10090) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 EC: 2 |
| >sp|Q5R7A2|ALG1_PONAB Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Pongo abelii GN=ALG1 PE=2 SV=1 | Back alignment and function description |
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Score = 335 bits (860), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 198/470 (42%), Positives = 267/470 (56%), Gaps = 36/470 (7%)
Query: 3 RRGRAC----VVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHI 58
RRGR VVLGD+GRSPRMQY ALSLA V ++ + SKPH +L++ I I
Sbjct: 27 RRGRTARHVVAVVLGDVGRSPRMQYHALSLAMH-GFSVTLLGFCNSKPHDELLQNNRIQI 85
Query: 59 HTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVA 118
+T+ ++ G P+V + +K + Q LLW L + +FL QNPP +P++
Sbjct: 86 VGLTELQSLAVG-PRVFQ---YGVKVVFQAMYLLWKLMWREPGAYIFL-QNPPGLPSIAV 140
Query: 119 VKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178
+ L S ++DWHN+GY+++ L G V + +W E+++G++++ LCVT AM+
Sbjct: 141 CWFVGCLCGSKLVIDWHNYGYSIMGLVHGPNHPLVLLAKWYERFFGRLSHLNLCVTNAMR 200
Query: 179 HELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQK 238
+LA+NW I+A +YD+P FF T L+ +H LF +L H P + + E
Sbjct: 201 EDLAENWHIRAVTVYDKPASFFKETPLDLQHRLFMKLGGT-HSPFRARSEPEDPATERSA 259
Query: 239 ADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDST 298
E + +G+ L RPAL+VSSTSWT DEDF ILL A
Sbjct: 260 FTER--DAGSGLVTRLH-ERPALLVSSTSWTEDEDFSILLAAL----------------- 299
Query: 299 NEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPL 358
E F + DG P L+ +ITGKGP +E Y I + + + T WL AEDYPL
Sbjct: 300 --EKFEQLTLDGHSL--PSLVCVITGKGPLREYYSHLIHQKHFQHIQVCTPWLEAEDYPL 355
Query: 359 LLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSE 418
LLGSADLGVCLHTSSSGLDLPMKVVDMFGC LPVCAV++ C+ ELVK ++NGL+F S E
Sbjct: 356 LLGSADLGVCLHTSSSGLDLPMKVVDMFGCHLPVCAVNFKCLHELVKHEENGLVFEDSEE 415
Query: 419 LADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEV 468
LA QL MLF FPD + L + R L RW W + PL+ +
Sbjct: 416 LAAQLQMLFSNFPDPAGKLNQFRK-NLRESQQLRWDESWVQTVLPLVMDT 464
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Participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. Involved in assembling the dolichol-pyrophosphate-GlcNAc(2)-Man(5) intermediate on the cytoplasmic surface of the ER. Pongo abelii (taxid: 9601) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 EC: 2 |
| >sp|P90522|ALG1_DICDI Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Dictyostelium discoideum GN=alg1 PE=2 SV=1 | Back alignment and function description |
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Score = 300 bits (769), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 171/436 (39%), Positives = 251/436 (57%), Gaps = 35/436 (8%)
Query: 5 GRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQW 64
R VVVLGD+GRSPRMQY ++SL++ + +V ++ Y S+PH I+ + SI I + +
Sbjct: 2 NRVAVVVLGDIGRSPRMQYHSMSLSKLENTKVTLIGYRESEPHPQIVNNDSITIEPLKPF 61
Query: 65 P-TIPRGLPKV------LKPVLLLLKPLIQFFMLLWFLCVKIASP-DVFLVQNPPSVPTL 116
P ++ K+ + P+L + K L Q L++ L VK+ SP + LVQ+PP++PT+
Sbjct: 62 PISMSNSFKKIPLISIFMWPLLAICKVLFQIIQLMYVLLVKVPSPLNTILVQSPPAIPTI 121
Query: 117 VAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSH--FVSIYRWIEKYYGKMANGCLCVT 174
++ +R ++DWHN GYTLL LSL + + + + ++IE+Y+ K A L VT
Sbjct: 122 FVMQIVCWIRGVHLVIDWHNLGYTLLKLSLSKSDNHPIIRLAKFIERYFAKNAYAHLFVT 181
Query: 175 QAMQHELAQNWGIKAT--VLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNA 232
M+ +L ++W +K V +D+ F + E+ E ++ ++
Sbjct: 182 NEMKIQLVRDWNLKGKTFVFHDKASPIFKSLTDREQEEF-------------LKTFINKY 228
Query: 233 GMEGQKADETIFTSLAGIDVFLKP-NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAI 291
++G+ D+ S+ P + ++++SSTSWT DEDF ILL+A + YD +
Sbjct: 229 SIKGE--DKVYIESVISKKSIRNPKQQTSIIISSTSWTQDEDFSILLDAIVKYD--IEHA 284
Query: 292 LNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWL 351
+N +++ EE D L LLFIITGKGP KE Y+EKI L LK+ T+WL
Sbjct: 285 INNNNNKVEEA-----QDESVVLAENLLFIITGKGPQKEYYQEKINSLSLKKSRIITVWL 339
Query: 352 SAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGL 411
+EDYP LL DLGV LH SSSG+DLPMKVVDMFGC LPV A+ + CI ELVKV+ NG
Sbjct: 340 DSEDYPKLLACCDLGVSLHNSSSGIDLPMKVVDMFGCCLPVLAIDFKCIGELVKVNYNGF 399
Query: 412 LFSSSSELADQLLMLF 427
LF S +L L LF
Sbjct: 400 LFKDSDQLHQLLNQLF 415
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Participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. Involved in assembling the dolichol-pyrophosphate-GlcNAc(2)-Man(5) intermediate on the cytoplasmic surface of the ER. Dictyostelium discoideum (taxid: 44689) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 EC: 2 |
| >sp|O13933|ALG1_SCHPO Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=alg1 PE=3 SV=2 | Back alignment and function description |
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Score = 268 bits (686), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 176/468 (37%), Positives = 246/468 (52%), Gaps = 77/468 (16%)
Query: 4 RGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILE-HPSIHIHTMT 62
+ R V+VLGD+ RSPRMQY A+S A+ + +VD++ Y + E H +I + +
Sbjct: 24 KKRIIVLVLGDIARSPRMQYHAVSFAK-LGWKVDLLGYQHPGSSVGLFESHENIRFYPI- 81
Query: 63 QWPTIPRGL-PKVLKPVLLL--LKPLIQFFMLLWFLCVKIASPDVFL-VQNPPSVPTLVA 118
P++P L PK L L LK L QF L W L V+ P FL +QNPP +P
Sbjct: 82 --PSLPAYLQPKNRLQFLFLGPLKVLHQFLALNWALFVR--KPASFLFIQNPPCIPVFFI 137
Query: 119 VKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178
+ LR + FI+DWHNFGY++L+L LG++ FV + + EKY + A L V++ M+
Sbjct: 138 AQCLHILRGTKFIIDWHNFGYSILALKLGKQHTFVKLLKIYEKYMARGAYAHLTVSKRMK 197
Query: 179 HELAQNWGIK-ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQ 237
++ Q WG+ V YD+PP F P E+K ++
Sbjct: 198 -DVLQTWGMNPCYVCYDRPPNHFTPIKNEQKKQM-------------------------- 230
Query: 238 KADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDS 297
S+ I P+ L+++STSWTPDED IL EA LNE D
Sbjct: 231 --------SIKKIPCEYNPSSTKLLITSTSWTPDEDIYILWEA-----------LNEYDK 271
Query: 298 TNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYP 357
T + P+LL +ITGKGP KE + + I++ L +V F WLS EDYP
Sbjct: 272 TLDT--------------PKLLVLITGKGPMKEEFSQYIKKHPLHKVRFCMPWLSIEDYP 317
Query: 358 LLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSS 417
++ ADLGVCLHTSSSGLDLPMKVVD+FGCG+PV A+SY I ELV +NGL+ + S
Sbjct: 318 QVMACADLGVCLHTSSSGLDLPMKVVDLFGCGVPVIALSYPTISELVHDGENGLIVNDSK 377
Query: 418 ELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLI 465
L+ ++ L ++ L L+ G L+ RW EW + P++
Sbjct: 378 ALSKKMQYLL----THANELNSLKLGALKES-EYRWDDEWNKVIPPIV 420
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Participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. Involved in assembling the dolichol-pyrophosphate-GlcNAc(2)-Man(5) intermediate on the cytoplasmic surface of the ER. Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 EC: 2 |
| >sp|Q6C3K2|ALG1_YARLI Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=ALG1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 257 bits (657), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 175/478 (36%), Positives = 242/478 (50%), Gaps = 78/478 (16%)
Query: 3 RRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMT 62
+R R V+VLGDLGRSPRM Y A SLAR +VD+ Y G+KP IL + I IH +
Sbjct: 38 KRKRTIVLVLGDLGRSPRMLYHARSLARS-GHKVDLCGYDGAKPFDEILNNDLIKIHHI- 95
Query: 63 QWPTI--PRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVK 120
P I R LP V V +LK + Q ++L+ L K+ D LVQNPPS+PTL V+
Sbjct: 96 --PLILNTRKLPFV---VFGILKVIRQHWLLISLLY-KLRGADYLLVQNPPSIPTLGVVR 149
Query: 121 WASSL--RRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178
+ + R+ ++DWHNFGYT+L+L L V ++ E ++G A LCVT M
Sbjct: 150 FYNLFLSTRTKVVLDWHNFGYTILALKLPETHPMVKFAKFYEGFFGGRAFVHLCVTVLMG 209
Query: 179 HELAQNWGI---KATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGME 235
+ + +G+ + L+D+P F P S EK ++ + L+ +
Sbjct: 210 QAMRKTFGMSGRRIVPLHDRPAFHFKPLSESEKLDVLRDFKETLY--------------D 255
Query: 236 GQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNED 295
AD I +VSSTS+TPDE+F ILL+A +YD +
Sbjct: 256 DMTADHKI------------------IVSSTSYTPDENFNILLDALALYDESKLDL---- 293
Query: 296 DSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAED 355
P L IITGKGP + K+ +L+LKRV+ RT WL D
Sbjct: 294 --------------------PPLRVIITGKGPMMPEFLAKVEKLQLKRVSIRTAWLEFAD 333
Query: 356 YPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSS 415
YP +LG+A LGV LH SSSG DLPMKVVDMFGCG+PV +V Y+ + ELVK + NG+
Sbjct: 334 YPRILGAAHLGVSLHESSSGYDLPMKVVDMFGCGIPVVSVDYAALSELVKTNTNGVAVKG 393
Query: 416 SSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPL--ITEVISQ 471
E+ + + LF + L ++ G + + W W + PL I E + Q
Sbjct: 394 HVEMGNTFMSLF----SNRGKLDNIKRGAMIESRNT-WDQTWVKTVGPLFDIGEYVQQ 446
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Participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. Involved in assembling the dolichol-pyrophosphate-GlcNAc(2)-Man(5) intermediate on the cytoplasmic surface of the ER. Yarrowia lipolytica (strain CLIB 122 / E 150) (taxid: 284591) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 EC: 2 |
| >sp|Q59Q79|ALG1_CANAL Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=ALG1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 228 bits (580), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 151/463 (32%), Positives = 234/463 (50%), Gaps = 74/463 (15%)
Query: 2 GRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTM 61
+R + VLGDLG SPRM Y A S ++ + V++ Y ++P I++ +I I +
Sbjct: 49 NKRKTISIFVLGDLGHSPRMCYHASSFSK-LDYYVNLCGYVETEPSHQIVDDVNIDIIPI 107
Query: 62 TQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKW 121
LP ++ +L +++ + + +LW D ++QNPPS+P L+ V
Sbjct: 108 EAIKNT-NNLPYIMFAILKVVRQCGKIWSILW----DTRGSDYIMIQNPPSIPILLIVIL 162
Query: 122 ASSL--RRSAFIVDWHNFGYTLLSLSLGRRSH-FVSIYRWIEKYYGKMANGCLCVTQAMQ 178
++ R + I+DWHN YT+L+L +H FV + + EK G+ AN + VT++M+
Sbjct: 163 FKTVFSRETKLIIDWHNLNYTILNLRYNNLNHPFVKLVKLYEKILGQFANLNITVTKSMK 222
Query: 179 HELAQNWGI---KATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGME 235
L + +G K LYD+P F P L K E M
Sbjct: 223 KYLVKEFGFQKSKIVTLYDRPGVQFQP--LSNKREF----------------------MS 258
Query: 236 GQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNED 295
K E ID+ + +++SSTS+TPDEDF ILL+A + N +
Sbjct: 259 EHKLFE-------DIDI----EKYKVLISSTSFTPDEDFNILLDA----------LKNYE 297
Query: 296 DSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAE 354
++ N P +L I+TGKGP K + E + +L +V ++ WLS+E
Sbjct: 298 NTPNT---------------PPILLIVTGKGPLKGKFLETVDKLEFTNKVCVKSAWLSSE 342
Query: 355 DYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFS 414
DYP +L ADLG+ LHTSSSG+DLPMK+VD FGCG+PV ++ + I+ELVK NGL+ +
Sbjct: 343 DYPKVLACADLGISLHTSSSGIDLPMKIVDFFGCGVPVVSLDFPAIDELVKNKVNGLITN 402
Query: 415 SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEW 457
S S+ ++ L D +L+ ++ G LE ++RW W
Sbjct: 403 SKSDQTKEVARLVTEVFTDDALLRSIKEGALEES-NSRWDENW 444
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Participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. Involved in assembling the dolichol-pyrophosphate-GlcNAc(2)-Man(5) intermediate on the cytoplasmic surface of the ER. Candida albicans (strain SC5314 / ATCC MYA-2876) (taxid: 237561) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 EC: 2 |
| >sp|P16661|ALG1_YEAST Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ALG1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 226 bits (575), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 159/467 (34%), Positives = 236/467 (50%), Gaps = 65/467 (13%)
Query: 4 RGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQ 63
+ R + VLGD+G SPR+ Y A+S ++ + +V++ Y I P+I +H M+
Sbjct: 38 KKRIIIFVLGDVGHSPRICYHAISFSK-LGWQVELCGYVEDTLPKIISSDPNITVHHMSN 96
Query: 64 WPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTL-VAVKWA 122
G V+ V +L ++ F LLW ++ D LVQNPPS+P L +AV +
Sbjct: 97 LKR-KGGGTSVIFMVKKVLFQVLSIFKLLW----ELRGSDYILVQNPPSIPILPIAVLY- 150
Query: 123 SSLRRSAFIVDWHNFGYTLLSLSL-GRRSH-FVSIYRWIEKYYGKMANGCLCVTQAMQHE 180
L I+DWHN Y++L L G H V I +E + K A+ L VT+AM+
Sbjct: 151 -KLTGCKLIIDWHNLAYSILQLKFKGNFYHPLVLISYMVEMIFSKFADYNLTVTEAMRKY 209
Query: 181 LAQNWGI---KATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQ 237
L Q++ + + VLYD+P F P + + + K L +++ + + + +
Sbjct: 210 LIQSFHLNPKRCAVLYDRPASQFQPLAGDISRQ------KALTTKAFIKNYIRD-DFDTE 262
Query: 238 KADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDS 297
K D+ ++V+STS+TPDED GILL A +Y+ DS
Sbjct: 263 KGDK-------------------IIVTSTSFTPDEDIGILLGALKIYENSYVKF----DS 299
Query: 298 TNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYP 357
+ P++L ITGKGP KE Y +++ KR +WLSAEDYP
Sbjct: 300 S----------------LPKILCFITGKGPLKEKYMKQVEEYDWKRCQIEFVWLSAEDYP 343
Query: 358 LLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSS 417
LL D GV LHTSSSGLDLPMK++DMFG GLPV A++Y ++ELV+ + NGL F
Sbjct: 344 KLLQLCDYGVSLHTSSSGLDLPMKILDMFGSGLPVIAMNYPVLDELVQHNVNGLKFVDRR 403
Query: 418 ELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPL 464
EL + L+ K D+D+ +KL+ + RW + WE + L
Sbjct: 404 ELHESLIFAMK----DADLYQKLKKNVTQEA-ENRWQSNWERTMRDL 445
|
Participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. Involved in assembling the dolichol-pyrophosphate-GlcNAc(2)-Man(5) intermediate on the cytoplasmic surface of the ER. Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 EC: 2 |
| >sp|Q6CVU2|ALG1_KLULA Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=ALG1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 220 bits (560), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 153/461 (33%), Positives = 225/461 (48%), Gaps = 72/461 (15%)
Query: 4 RGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQ 63
+ R +VVLGDLG SPR+ Y A S ++ +V++ Y S IL+ +I IH + +
Sbjct: 42 KTRILIVVLGDLGHSPRILYHARSFSKA-GFQVELSGYVDSDIPTDILDDDNIEIHGLKK 100
Query: 64 WPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWAS 123
+ + L K LK L Q + W K+ + D L+QNPP++P L
Sbjct: 101 YGSEKGLLVKALKQGL-------QLCSMFW----KLRAVDYILLQNPPTIPILPIAVVVK 149
Query: 124 SLRRSAFIVDWHNFGYTLLSLSLGRR--SHFVSIYRWIEKYYGKMANGCLCVTQAMQHEL 181
+ R+ I+DWHN GYT+L + + V + IE + K AN L VT+AM+ L
Sbjct: 150 TFSRAKLIIDWHNLGYTILQMKFKDQFLHPLVLLAYLIEWIFAKFANYHLTVTKAMKTYL 209
Query: 182 AQNWGI---KATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSN-AGMEGQ 237
+ +GI K VLYD+P + F P + E + Q+ ++ E
Sbjct: 210 VEKFGIDGKKIAVLYDRPGKQFSPLKEADDREALLK-----------QEFIAKYIPKEFD 258
Query: 238 KADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDS 297
+ + IF V+STS+TPDED +L+ + +Y+ D
Sbjct: 259 ISKDKIF------------------VTSTSFTPDEDISVLIGSFKIYENSFQKF----DQ 296
Query: 298 TNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYP 357
T PR+L ITGKGP +E ++++ + RV +WLS+EDYP
Sbjct: 297 T----------------LPRILCFITGKGPLQEKIVKQVQDFKWDRVQVEFLWLSSEDYP 340
Query: 358 LLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSS 417
LL D GV LHTSSSGLDLPMK++DMFG GLPV ++Y ++ELV+ + NGL F+
Sbjct: 341 KLLRLCDYGVSLHTSSSGLDLPMKILDMFGSGLPVICMNYPVLDELVQQNVNGLKFADRR 400
Query: 418 ELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWE 458
EL + L+ K D V ++++ G L RW WE
Sbjct: 401 ELHEALIFSVK----DEQVHQEIKRGALRES-KNRWNESWE 436
|
Participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. Involved in assembling the dolichol-pyrophosphate-GlcNAc(2)-Man(5) intermediate on the cytoplasmic surface of the ER. Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) (taxid: 284590) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 EC: 2 |
| >sp|Q75BA5|ALG1_ASHGO Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=ALG1 PE=3 SV=2 | Back alignment and function description |
|---|
Score = 217 bits (553), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 155/456 (33%), Positives = 223/456 (48%), Gaps = 65/456 (14%)
Query: 6 RACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWP 65
R + VLGDLG SPR+ Y A S + EV++ Y +P +L+ P + I +
Sbjct: 64 RIAIYVLGDLGHSPRICYHARSFS-AAGWEVELCGYLEEQPPKDLLDDPRVTIRALPGAS 122
Query: 66 TIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSL 125
+ L + + V+L +++ LW ++ D L+QNPPS+P L V L
Sbjct: 123 NAGKSLGQTARKVVLQTCHIVR---QLW----ELRGCDYILIQNPPSIPLLPIVAIFKVL 175
Query: 126 RRSAFIVDWHNFGYTLLSLSLGRRSH-FVSIYRWIEKYYGKMANGCLCVTQAMQHELAQN 184
R+ I+DWHNF YT+L L +GR H V + +E + +MA+ + VT AM+ L Q+
Sbjct: 176 TRTRLILDWHNFAYTVLQLRVGRFLHPLVLVSYAVEFLFSRMADYHITVTAAMKDYLVQS 235
Query: 185 WGIKA---TVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADE 241
+ + A V+YD+P E F P E+ L +P ++ + AG + Q+ D
Sbjct: 236 FLLPARRIAVMYDRPGEQFRPLPAGER-------GAALAEPF-IRGYIP-AGFDVQRGD- 285
Query: 242 TIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEE 301
++V+STS+T DED +L A +Y+ A D+T
Sbjct: 286 ------------------TILVTSTSFTLDEDINVLFGALKIYESAAAKF----DTT--- 320
Query: 302 VFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLG 361
PR+L +TGKGP K Y E++R + +R +WLSAEDYP LL
Sbjct: 321 -------------LPRILLFVTGKGPLKGKYMEEVRNYKWERCTIHFLWLSAEDYPRLLQ 367
Query: 362 SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELAD 421
D GV LHTS+SGLDLPMKV+DMFG GLP + Y I ELV+ NGL F++ EL
Sbjct: 368 LCDFGVSLHTSTSGLDLPMKVLDMFGSGLPAFVMDYPAIGELVQDRVNGLRFTTRRELEQ 427
Query: 422 QLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEW 457
L+ K D K L+ L + RW W
Sbjct: 428 CLIFAIK----DEHTRKVLKENAL-LESKNRWHQSW 458
|
Participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. Involved in assembling the dolichol-pyrophosphate-GlcNAc(2)-Man(5) intermediate on the cytoplasmic surface of the ER. Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) (taxid: 284811) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 EC: 2 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 474 | ||||||
| 302142187 | 484 | unnamed protein product [Vitis vinifera] | 0.993 | 0.973 | 0.797 | 0.0 | |
| 225458860 | 598 | PREDICTED: chitobiosyldiphosphodolichol | 0.991 | 0.785 | 0.794 | 0.0 | |
| 388521579 | 484 | unknown [Medicago truncatula] | 0.993 | 0.973 | 0.782 | 0.0 | |
| 356555181 | 521 | PREDICTED: chitobiosyldiphosphodolichol | 0.993 | 0.904 | 0.775 | 0.0 | |
| 357451823 | 498 | Chitobiosyldiphosphodolichol beta-mannos | 0.989 | 0.941 | 0.779 | 0.0 | |
| 224121616 | 481 | predicted protein [Populus trichocarpa] | 0.983 | 0.968 | 0.791 | 0.0 | |
| 255582792 | 476 | beta1,4 mannosyltransferase, putative [R | 0.983 | 0.978 | 0.775 | 0.0 | |
| 449445120 | 480 | PREDICTED: chitobiosyldiphosphodolichol | 0.993 | 0.981 | 0.753 | 0.0 | |
| 297850068 | 465 | predicted protein [Arabidopsis lyrata su | 0.978 | 0.997 | 0.721 | 0.0 | |
| 15219285 | 465 | beta-1,4-mannosyltransferase [Arabidopsi | 0.978 | 0.997 | 0.719 | 0.0 |
| >gi|302142187|emb|CBI19390.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 788 bits (2034), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/473 (79%), Positives = 414/473 (87%), Gaps = 2/473 (0%)
Query: 1 MGRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHT 60
+GRRGRA VVVLGD+GRSPRMQY ALSLARQ SLEVD+VAYGGS PH+A+LE+PSIHIHT
Sbjct: 9 IGRRGRAAVVVLGDIGRSPRMQYHALSLARQASLEVDIVAYGGSTPHSAVLENPSIHIHT 68
Query: 61 MTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVK 120
M QWPTIPR + K+ P++LL K L QFF L WFLCVKI SPDVF+VQNPPSVPTLVAVK
Sbjct: 69 MKQWPTIPRIVSKIFYPLVLLFKALFQFFTLFWFLCVKIPSPDVFIVQNPPSVPTLVAVK 128
Query: 121 WASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHE 180
WAS LR SAFIVDWHNFGYTLL LSLGR S FV++Y W EKYYGK ANG LCVT+AMQHE
Sbjct: 129 WASWLRNSAFIVDWHNFGYTLLGLSLGRSSRFVALYHWFEKYYGKAANGSLCVTRAMQHE 188
Query: 181 LAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGME--GQK 238
LAQNWGIKATVLYDQPPEFF PT +EEKH+LFCRL+K L P G QDCV+ ME Q
Sbjct: 189 LAQNWGIKATVLYDQPPEFFRPTPMEEKHKLFCRLHKDLCHPRGGQDCVTAGTMELWNQD 248
Query: 239 ADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDST 298
DET+FT+ D+FLK NRPALVVSSTSWTPDEDFG+LLEAA+MYDRRVAAILNEDDST
Sbjct: 249 TDETLFTAKMDTDIFLKSNRPALVVSSTSWTPDEDFGMLLEAAVMYDRRVAAILNEDDST 308
Query: 299 NEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPL 358
EEV KE + GKQ+LYPRLLFIITGKGP+KE YEEKIR+L+L RVAFRTMWLSAEDYPL
Sbjct: 309 KEEVLWKETNSGKQFLYPRLLFIITGKGPNKEKYEEKIRQLKLNRVAFRTMWLSAEDYPL 368
Query: 359 LLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSE 418
LLGSADLG+CLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKV+KNGLLFSSSSE
Sbjct: 369 LLGSADLGICLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVEKNGLLFSSSSE 428
Query: 419 LADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEVISQ 471
LA++LLMLFKGFPD+ D LK LRNG +E G SARW TEWE HAKPLI++VIS+
Sbjct: 429 LANELLMLFKGFPDNCDALKLLRNGVVEAGFSARWDTEWERHAKPLISKVISE 481
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225458860|ref|XP_002283369.1| PREDICTED: chitobiosyldiphosphodolichol beta-mannosyltransferase-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 784 bits (2024), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/472 (79%), Positives = 411/472 (87%), Gaps = 2/472 (0%)
Query: 1 MGRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHT 60
+GRRGRA VVVLGD+GRSPRMQY ALSLARQ SLEVD+VAYGGS PH+A+LE+PSIHIHT
Sbjct: 124 IGRRGRAAVVVLGDIGRSPRMQYHALSLARQASLEVDIVAYGGSTPHSAVLENPSIHIHT 183
Query: 61 MTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVK 120
M QWPTIPR + K+ P++LL K L QFF L WFLCVKI SPDVF+VQNPPSVPTLVAVK
Sbjct: 184 MKQWPTIPRIVSKIFYPLVLLFKALFQFFTLFWFLCVKIPSPDVFIVQNPPSVPTLVAVK 243
Query: 121 WASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHE 180
WAS LR SAFIVDWHNFGYTLL LSLGR S FV++Y W EKYYGK ANG LCVT+AMQHE
Sbjct: 244 WASWLRNSAFIVDWHNFGYTLLGLSLGRSSRFVALYHWFEKYYGKAANGSLCVTRAMQHE 303
Query: 181 LAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGME--GQK 238
LAQNWGIKATVLYDQPPEFF PT +EEKH+LFCRL+K L P G QDCV+ ME Q
Sbjct: 304 LAQNWGIKATVLYDQPPEFFRPTPMEEKHKLFCRLHKDLCHPRGGQDCVTAGTMELWNQD 363
Query: 239 ADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDST 298
DET+FT+ D+FLK NRPALVVSSTSWTPDEDFG+LLEAA+MYDRRVAAILNEDDST
Sbjct: 364 TDETLFTAKMDTDIFLKSNRPALVVSSTSWTPDEDFGMLLEAAVMYDRRVAAILNEDDST 423
Query: 299 NEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPL 358
EEV KE + GKQ+LYPRLLFIITGKGP+KE YEEKIR+L+L RVAFRTMWLSAEDYPL
Sbjct: 424 KEEVLWKETNSGKQFLYPRLLFIITGKGPNKEKYEEKIRQLKLNRVAFRTMWLSAEDYPL 483
Query: 359 LLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSE 418
LLGSADLG+CLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKV+KNGLLFSSSSE
Sbjct: 484 LLGSADLGICLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVEKNGLLFSSSSE 543
Query: 419 LADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEVIS 470
LA++LLMLFKGFPD+ D LK LRNG +E G SARW TEWE HAKPLI++ S
Sbjct: 544 LANELLMLFKGFPDNCDALKLLRNGVVEAGFSARWDTEWERHAKPLISKASS 595
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388521579|gb|AFK48851.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 781 bits (2016), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/473 (78%), Positives = 417/473 (88%), Gaps = 2/473 (0%)
Query: 2 GRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTM 61
GRRGRACVVVLGD+GRSPRMQY ALSL+ Q LEVD+VAYGGS+PH ++L +PSIHIH M
Sbjct: 12 GRRGRACVVVLGDIGRSPRMQYHALSLSNQAFLEVDIVAYGGSEPHTSLLANPSIHIHLM 71
Query: 62 TQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKW 121
QWPT + LPK+L+P +LLLKPLIQF MLLW+LCVKI SPD+F+VQNPPSVPTLVAVKW
Sbjct: 72 KQWPTARQNLPKILQPFMLLLKPLIQFVMLLWYLCVKIPSPDIFIVQNPPSVPTLVAVKW 131
Query: 122 ASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHEL 181
AS LR S+F++DWHNFGYTLL +SLGR S FVS+Y+W EK+YGKMA+ LCVT+AMQHEL
Sbjct: 132 ASWLRNSSFVIDWHNFGYTLLGMSLGRNSRFVSLYKWFEKHYGKMADTSLCVTKAMQHEL 191
Query: 182 AQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAG--MEGQKA 239
AQNWGI ATVLYDQPP+FFHP SLEE+H+LFCRLN+ + PLGV DCVSN M Q
Sbjct: 192 AQNWGINATVLYDQPPDFFHPASLEERHKLFCRLNEHFYHPLGVGDCVSNGTSLMSSQIQ 251
Query: 240 DETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTN 299
+ET+FT+ AG +V LKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDS +
Sbjct: 252 NETLFTTEAGSNVSLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSLD 311
Query: 300 EEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLL 359
EEV KEISDGKQ LYPRLLF+ITGKGP+K YE KI+ L+LKRVAFRTMWLSA+DYPLL
Sbjct: 312 EEVIWKEISDGKQCLYPRLLFVITGKGPEKAKYEAKIKSLKLKRVAFRTMWLSADDYPLL 371
Query: 360 LGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSEL 419
LGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI+ELV VDKNGLLFSSSSEL
Sbjct: 372 LGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIKELVSVDKNGLLFSSSSEL 431
Query: 420 ADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEVISQF 472
AD+LL LFKGFP++ D LK L++G L+ G S+RW TEWEEHAKPLITEVIS+F
Sbjct: 432 ADELLTLFKGFPNECDSLKVLKSGALDTGASSRWVTEWEEHAKPLITEVISRF 484
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356555181|ref|XP_003545914.1| PREDICTED: chitobiosyldiphosphodolichol beta-mannosyltransferase-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 778 bits (2010), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/476 (77%), Positives = 417/476 (87%), Gaps = 5/476 (1%)
Query: 2 GRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTM 61
GRRGRACVVVLGD+GRSPRMQY ALSLA Q SLEVD+VAYGGS+PH A+L +PSIHI+ M
Sbjct: 11 GRRGRACVVVLGDIGRSPRMQYHALSLANQASLEVDIVAYGGSEPHTALLANPSIHIYIM 70
Query: 62 TQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKW 121
QW T + LPK+L+P++LLLKPL+QF MLLWFLCVKI SPD+F+VQNPPSVPTLVAVKW
Sbjct: 71 KQWLTASQSLPKILRPIMLLLKPLVQFCMLLWFLCVKIPSPDIFIVQNPPSVPTLVAVKW 130
Query: 122 ASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHEL 181
AS LR S+F++DWHNFGYTLL+LSLGR SHFVS+Y+W EK+YGKMA+ LCVT+AMQHEL
Sbjct: 131 ASWLRNSSFVIDWHNFGYTLLALSLGRNSHFVSLYKWFEKHYGKMADASLCVTKAMQHEL 190
Query: 182 AQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQ---- 237
AQNWGI ATVLYDQPP+ FHP SLEE+H+LFCRLN+ L + LGV+DCVSN +
Sbjct: 191 AQNWGINATVLYDQPPDIFHPASLEERHKLFCRLNEDLFRSLGVRDCVSNGKIGNSLVAS 250
Query: 238 -KADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDD 296
+ET+F + G +++LKPNRPALVVSSTSWTPDEDFGILLEAA+MYDRRVAAIL EDD
Sbjct: 251 CHQNETLFATEVGSNIYLKPNRPALVVSSTSWTPDEDFGILLEAAVMYDRRVAAILGEDD 310
Query: 297 STNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDY 356
S +EEV KEISDGKQ LYPRLLFIITGKGP+KE YE KI+R++LKRVAFRTMWLSA+DY
Sbjct: 311 SVDEEVIWKEISDGKQCLYPRLLFIITGKGPEKEKYEVKIKRMKLKRVAFRTMWLSADDY 370
Query: 357 PLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSS 416
PLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI ELV+VDKNGLLFSSS
Sbjct: 371 PLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIRELVRVDKNGLLFSSS 430
Query: 417 SELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEVISQF 472
SELAD+LL+LFKGFPDD D LK L+ G LE G S+RWATEWEEHAKPLITE S F
Sbjct: 431 SELADELLLLFKGFPDDCDALKVLKYGALETGSSSRWATEWEEHAKPLITEASSFF 486
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357451823|ref|XP_003596188.1| Chitobiosyldiphosphodolichol beta-mannosyltransferase [Medicago truncatula] gi|355485236|gb|AES66439.1| Chitobiosyldiphosphodolichol beta-mannosyltransferase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 773 bits (1997), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/471 (77%), Positives = 413/471 (87%), Gaps = 2/471 (0%)
Query: 2 GRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTM 61
GRRGRACVVVLGD+GRSPRMQY ALSL+ Q LEVD+VAYGGS+PH ++L +PSIHIH M
Sbjct: 12 GRRGRACVVVLGDIGRSPRMQYHALSLSNQAFLEVDIVAYGGSEPHTSLLANPSIHIHLM 71
Query: 62 TQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKW 121
QWPT + LPK+L+P +LLLKPLIQF MLLW+LCVKI SPD+F+VQNPPSVPTLVAVKW
Sbjct: 72 KQWPTARQNLPKILQPFMLLLKPLIQFVMLLWYLCVKIPSPDIFIVQNPPSVPTLVAVKW 131
Query: 122 ASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHEL 181
AS LR S+F++DWHNFGYTLL +SLGR S FVS+Y+W EK+YGKMA+ LCVT+AMQHEL
Sbjct: 132 ASWLRNSSFVIDWHNFGYTLLGMSLGRNSRFVSLYKWFEKHYGKMADTSLCVTKAMQHEL 191
Query: 182 AQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAG--MEGQKA 239
AQNWGI ATVLYDQPP+FFHP SLEE+H+LFCRLN+ + PLGV DCVSN M Q
Sbjct: 192 AQNWGINATVLYDQPPDFFHPASLEERHKLFCRLNEHFYHPLGVGDCVSNGTSLMSSQIQ 251
Query: 240 DETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTN 299
+ET+FT+ AG +V LKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDS +
Sbjct: 252 NETLFTTEAGSNVSLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSLD 311
Query: 300 EEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLL 359
EEV KEISDGKQ LYPRLLF+ITGKGP+K YE KI+ L+LKRVAFRTMWLSA+DYPLL
Sbjct: 312 EEVIWKEISDGKQCLYPRLLFVITGKGPEKAKYEAKIKSLKLKRVAFRTMWLSADDYPLL 371
Query: 360 LGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSEL 419
LGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI+ELV VDKNGLLFSSSSEL
Sbjct: 372 LGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIKELVSVDKNGLLFSSSSEL 431
Query: 420 ADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEVIS 470
AD+LL LFKGFP++ D LK L++G L+ G S+RW TEWEEHAKPLITE S
Sbjct: 432 ADELLTLFKGFPNECDSLKVLKSGALDTGASSRWVTEWEEHAKPLITEASS 482
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224121616|ref|XP_002330745.1| predicted protein [Populus trichocarpa] gi|222872521|gb|EEF09652.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 773 bits (1996), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/470 (79%), Positives = 412/470 (87%), Gaps = 4/470 (0%)
Query: 1 MGRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHT 60
MG+RGRACVVVLGD+GRSPRMQY ALSLARQ SL+VD+VAYGGS+PH A+ E+ SIHIH
Sbjct: 1 MGKRGRACVVVLGDIGRSPRMQYHALSLARQASLQVDIVAYGGSEPHMALRENQSIHIHK 60
Query: 61 MTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVK 120
M QWP IP+GLPK+ KP +LLLKPL QF MLLW+LCVKI PDVFLVQNPPSVPTLVAVK
Sbjct: 61 MKQWPAIPQGLPKMFKPFMLLLKPLFQFLMLLWYLCVKIPPPDVFLVQNPPSVPTLVAVK 120
Query: 121 WASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHE 180
WAS LR + FIVDWHNFGYTLL+LSLGR S FV++YRW E++YGKMA+G LCVT+AMQHE
Sbjct: 121 WASWLRNAKFIVDWHNFGYTLLALSLGRNSRFVTVYRWFERHYGKMAHGSLCVTRAMQHE 180
Query: 181 LAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNA--GMEGQK 238
L QNWGIKA VLYDQPPEFFHP SLEEKH+LFCRL K + + GV DC S+ GM
Sbjct: 181 LTQNWGIKAAVLYDQPPEFFHPASLEEKHKLFCRLGKHISESQGVHDCASHGAVGMGSPN 240
Query: 239 ADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDST 298
+ET+FT++ D+FLKPNRPALVVSSTSWT DEDFGILLEAA+MYDRRVAAILNEDDST
Sbjct: 241 LNETLFTTMVADDIFLKPNRPALVVSSTSWTADEDFGILLEAAVMYDRRVAAILNEDDST 300
Query: 299 NEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPL 358
EV E+S GK+ LYPRLLFIITGKGP+KE YEEKIRRL LKRVAFRTMWLSAEDYPL
Sbjct: 301 -VEVLWNEMSAGKECLYPRLLFIITGKGPEKEKYEEKIRRLHLKRVAFRTMWLSAEDYPL 359
Query: 359 LLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSE 418
LLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV+YSCI+ELVKV+KNGLLFSSSSE
Sbjct: 360 LLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVAYSCIKELVKVEKNGLLFSSSSE 419
Query: 419 LADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEV 468
LAD+LLMLFKGFP++ D LK LRNG LEMG S+RWATEWEEHAKPLI+E
Sbjct: 420 LADELLMLFKGFPEECDALKLLRNGALEMG-SSRWATEWEEHAKPLISEA 468
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255582792|ref|XP_002532170.1| beta1,4 mannosyltransferase, putative [Ricinus communis] gi|223528138|gb|EEF30207.1| beta1,4 mannosyltransferase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 745 bits (1923), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/468 (77%), Positives = 412/468 (88%), Gaps = 2/468 (0%)
Query: 4 RGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQ 63
RGRACVVVLGD+GRSPRMQY ALSLA Q SL+VD+VAYGGS+PH A+L++ SIHIH M Q
Sbjct: 8 RGRACVVVLGDIGRSPRMQYHALSLALQASLQVDIVAYGGSEPHMALLQNQSIHIHKMKQ 67
Query: 64 WPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWAS 123
WP +P+ LPK+LK ++L+LKPL QFF+LLW LC K+ +PDVF+VQNPPSVPTLVAVKWAS
Sbjct: 68 WPVLPQSLPKLLKALVLVLKPLFQFFVLLWHLCFKVPAPDVFIVQNPPSVPTLVAVKWAS 127
Query: 124 SLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQ 183
LR SAFIVDWHNFGYTLL+LSLGR S FV++YRW E++YG+MANG LCVT+AMQHELAQ
Sbjct: 128 WLRNSAFIVDWHNFGYTLLALSLGRNSRFVAVYRWFERHYGRMANGSLCVTKAMQHELAQ 187
Query: 184 NWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETI 243
NWGI ATVLYDQPPEFF+PTSLEEKH+LFCRL+K + QP + DC S GM +ET+
Sbjct: 188 NWGINATVLYDQPPEFFNPTSLEEKHKLFCRLDKYIIQPGSIHDCAS-YGMGNHNVNETM 246
Query: 244 FTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVF 303
FT+ D LKPNRPALVVSSTSWTPDEDFGILLEAA+MYDRRVAAILNE+DS+ +EV
Sbjct: 247 FTTSVDGDTILKPNRPALVVSSTSWTPDEDFGILLEAAVMYDRRVAAILNENDSSLDEVL 306
Query: 304 LKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSA 363
KE++ GKQ LYPRLLF+ITGKGP+KE YEEKIRRL LKRVAFRTMWLSAEDYPLLLGSA
Sbjct: 307 WKELTKGKQCLYPRLLFVITGKGPEKEKYEEKIRRLHLKRVAFRTMWLSAEDYPLLLGSA 366
Query: 364 DLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELADQL 423
DLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV+YSCI+ELV+VDKNGLLFSSSSELAD+L
Sbjct: 367 DLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVAYSCIKELVEVDKNGLLFSSSSELADEL 426
Query: 424 LMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEVISQ 471
LMLFK +PD+ + LK LRNG LE S+RWATEWE HAKPLITEVIS+
Sbjct: 427 LMLFKSYPDECNALKLLRNGALEKS-SSRWATEWEAHAKPLITEVISK 473
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449445120|ref|XP_004140321.1| PREDICTED: chitobiosyldiphosphodolichol beta-mannosyltransferase-like [Cucumis sativus] gi|449507727|ref|XP_004163113.1| PREDICTED: chitobiosyldiphosphodolichol beta-mannosyltransferase-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 737 bits (1902), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/474 (75%), Positives = 406/474 (85%), Gaps = 3/474 (0%)
Query: 2 GRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTM 61
G+ GRACVVVLGDLGRSPRMQY ALSLARQ +LEVD+VAYGGS+PH+A+LEH SIHIHTM
Sbjct: 9 GKGGRACVVVLGDLGRSPRMQYHALSLARQANLEVDIVAYGGSQPHSALLEHRSIHIHTM 68
Query: 62 TQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKW 121
T WP + LP + +PV LL+KPL+QF MLLWFL V+I SP F+VQNPPSVPTL+AVKW
Sbjct: 69 TPWPKFLQNLPWIFRPVTLLVKPLVQFLMLLWFL-VRICSPAFFIVQNPPSVPTLIAVKW 127
Query: 122 ASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHEL 181
S L+RSAFI+DWHNFG+TLL+LSLGR S FV++YRWIEKY+GKMA+ CVT+AMQHEL
Sbjct: 128 VSVLKRSAFIIDWHNFGHTLLALSLGRNSSFVAVYRWIEKYFGKMADDSFCVTKAMQHEL 187
Query: 182 AQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVS-NAGMEGQKAD 240
A+NW IKATV YDQPPEFFH SL EKHELF RL+ + QPLG+QDCVS AGM G +
Sbjct: 188 AENWDIKATVFYDQPPEFFHVASLLEKHELFYRLHSNIIQPLGLQDCVSYGAGMLGHEHQ 247
Query: 241 ETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNE 300
ET T L G D+FLK NRPA+VVSSTSWTPDEDF ILLEAA+MYDRRVAA+LNEDDS +
Sbjct: 248 ETFSTRLVGKDIFLKQNRPAVVVSSTSWTPDEDFNILLEAAVMYDRRVAALLNEDDSIPD 307
Query: 301 EVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLL 360
E KEI D KQ L+PRLLFIITGKGPDK+ YE+KI +L LKRVAFRTMWLSAEDYPLLL
Sbjct: 308 EFVWKEIYDEKQCLFPRLLFIITGKGPDKQEYEDKISKLHLKRVAFRTMWLSAEDYPLLL 367
Query: 361 GSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELA 420
GSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI ELVKV KNGLLFSSSSELA
Sbjct: 368 GSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCINELVKVGKNGLLFSSSSELA 427
Query: 421 DQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEVISQFDD 474
D+LLMLF+GFP++ + L L+ T+EMG S RW+TEWEEHAKPLI++VI+Q+ D
Sbjct: 428 DELLMLFRGFPNECNDLHSLKKSTVEMG-SRRWSTEWEEHAKPLISQVITQYQD 480
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297850068|ref|XP_002892915.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297338757|gb|EFH69174.1| predicted protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 699 bits (1803), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/474 (72%), Positives = 390/474 (82%), Gaps = 10/474 (2%)
Query: 1 MGRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHT 60
MG+RGRACVVVLGDLGRSPRMQY ALSLARQ S +VD+VAYGGS PH A+L HPSIHIHT
Sbjct: 1 MGKRGRACVVVLGDLGRSPRMQYHALSLARQASFQVDIVAYGGSIPHEAVLNHPSIHIHT 60
Query: 61 MTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVK 120
M Q P + PK+L PV LLLK IQF MLLWFL VK+ +PD+FLVQNPPSVPTL+AVK
Sbjct: 61 MAQ-PRFLQLFPKILYPVTLLLKAFIQFTMLLWFLFVKVPAPDIFLVQNPPSVPTLIAVK 119
Query: 121 WASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHE 180
WASS RR+AF+VDWHNFGYTLL+LSLGR + FVS+YRW E +YGKMA G LCVT+AMQHE
Sbjct: 120 WASSWRRAAFVVDWHNFGYTLLALSLGRNNLFVSLYRWFENHYGKMATGSLCVTKAMQHE 179
Query: 181 LAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKAD 240
L QNWG++A VLYDQPPEFF P LEE+HELFCR+ K L P+GV D +S +E Q+ +
Sbjct: 180 LDQNWGVRAQVLYDQPPEFFRPALLEERHELFCRVKKDLCHPIGVYDIIS-IELENQELN 238
Query: 241 ETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNE 300
ET+FT+ D+ LK NRPALVVSSTSWTPDE+FGILLEAA+MYDRRVAA ++
Sbjct: 239 ETLFTTKINTDISLKQNRPALVVSSTSWTPDENFGILLEAAVMYDRRVAARSKGSETA-- 296
Query: 301 EVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLL 360
EIS+ Q+LYP LLFIITGKGP+KE YE KI+RL L+ VAFRTMWL+AEDYPLLL
Sbjct: 297 -----EISE-DQHLYPNLLFIITGKGPEKEMYEGKIKRLNLRHVAFRTMWLAAEDYPLLL 350
Query: 361 GSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELA 420
GSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVC+VSYSCI+ELVK KNGLLFSSSSELA
Sbjct: 351 GSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCSVSYSCIQELVKDGKNGLLFSSSSELA 410
Query: 421 DQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEVISQFDD 474
DQLL+LFKGFP + D L L+ G +E G S RWATEWE+ AKPLIT+V+SQ D
Sbjct: 411 DQLLILFKGFPGNCDALMSLKAGAMETGSSGRWATEWEDCAKPLITQVVSQIAD 464
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15219285|ref|NP_173105.1| beta-1,4-mannosyltransferase [Arabidopsis thaliana] gi|22136000|gb|AAM91582.1| unknown protein [Arabidopsis thaliana] gi|31376395|gb|AAP49524.1| At1g16570 [Arabidopsis thaliana] gi|332191351|gb|AEE29472.1| beta-1,4-mannosyltransferase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 696 bits (1795), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/474 (71%), Positives = 390/474 (82%), Gaps = 10/474 (2%)
Query: 1 MGRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHT 60
MG+RGRACVVVLGDLGRSPRMQY ALSLARQ S +VD+VAYGGS PH A+L HPSIHIHT
Sbjct: 1 MGKRGRACVVVLGDLGRSPRMQYHALSLARQASFQVDIVAYGGSIPHEAVLNHPSIHIHT 60
Query: 61 MTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVK 120
M Q P + PK+L PV LLLK IQF MLLWFL VK+ +PD+FLVQNPPSVPTL+AVK
Sbjct: 61 MAQ-PRFIQYFPKILYPVTLLLKAFIQFTMLLWFLFVKVPAPDIFLVQNPPSVPTLIAVK 119
Query: 121 WASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHE 180
WASS RR+AF+VDWHNFGYTLL+LSLGR + VS+YRW E +YGKMA G LCVT+AMQHE
Sbjct: 120 WASSWRRAAFVVDWHNFGYTLLALSLGRNNLLVSLYRWSENHYGKMATGSLCVTKAMQHE 179
Query: 181 LAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKAD 240
L QNWG++A VLYDQPPEFF P LEE+HELFCR+ K L P+GV D +S +E Q+ +
Sbjct: 180 LDQNWGVRAKVLYDQPPEFFRPALLEERHELFCRVRKDLCHPIGVYDFISRE-LENQELN 238
Query: 241 ETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNE 300
ET+FT+ D+ LK NRPALVVSSTSWTPDE+FGILLEAA+MYDRRVAA ++
Sbjct: 239 ETLFTTKFNADISLKQNRPALVVSSTSWTPDENFGILLEAAVMYDRRVAARSKGSETA-- 296
Query: 301 EVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLL 360
EIS+ +Q+ YP LLFIITGKGP+KE YEEKI+RL L+ VAFRTMWL+AEDYPLLL
Sbjct: 297 -----EISE-EQHHYPNLLFIITGKGPEKEMYEEKIKRLNLRHVAFRTMWLAAEDYPLLL 350
Query: 361 GSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELA 420
GSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVC+VSYSCI+ELVK KNGLLFSSSSELA
Sbjct: 351 GSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCSVSYSCIQELVKDGKNGLLFSSSSELA 410
Query: 421 DQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEVISQFDD 474
DQLL+LFKGFP + D L L+ G +E G S RWATEWE+ AKPLIT+V+SQ D
Sbjct: 411 DQLLILFKGFPGNCDALMSLKAGAMETGSSGRWATEWEDCAKPLITQVVSQIAD 464
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 474 | ||||||
| TAIR|locus:2017963 | 496 | AT1G16570 [Arabidopsis thalian | 0.886 | 0.846 | 0.709 | 4.6e-174 | |
| ZFIN|ZDB-GENE-030131-6093 | 488 | alg1 "asparagine-linked glycos | 0.569 | 0.553 | 0.407 | 4.3e-94 | |
| UNIPROTKB|E1BRK4 | 462 | ALG1 "Uncharacterized protein" | 0.575 | 0.590 | 0.389 | 4.9e-91 | |
| MGI|MGI:2384774 | 482 | Alg1 "asparagine-linked glycos | 0.580 | 0.570 | 0.383 | 6.3e-89 | |
| UNIPROTKB|Q9BT22 | 464 | ALG1 "Chitobiosyldiphosphodoli | 0.571 | 0.584 | 0.384 | 2.7e-88 | |
| FB|FBgn0038552 | 446 | CG18012 [Drosophila melanogast | 0.582 | 0.618 | 0.388 | 3.5e-88 | |
| RGD|1310700 | 481 | Alg1 "ALG1, chitobiosyldiphosp | 0.580 | 0.571 | 0.383 | 4.4e-88 | |
| UNIPROTKB|D4A5S6 | 465 | Alg1 "Protein Alg1" [Rattus no | 0.580 | 0.591 | 0.383 | 4.4e-88 | |
| UNIPROTKB|F1N2J7 | 464 | ALG1 "Uncharacterized protein" | 0.582 | 0.594 | 0.394 | 5.6e-88 | |
| UNIPROTKB|F1RKX2 | 468 | LOC100524193 "Uncharacterized | 0.592 | 0.600 | 0.382 | 3.9e-87 |
| TAIR|locus:2017963 AT1G16570 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1549 (550.3 bits), Expect = 4.6e-174, Sum P(2) = 4.6e-174
Identities = 305/430 (70%), Positives = 345/430 (80%)
Query: 1 MGRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHT 60
MG+RGRACVVVLGDLGRSPRMQY ALSLARQ S +VD+VAYGGS PH A+L HPSIHIHT
Sbjct: 1 MGKRGRACVVVLGDLGRSPRMQYHALSLARQASFQVDIVAYGGSIPHEAVLNHPSIHIHT 60
Query: 61 MTQWPTIPRGXXXXXXXXXXXXXXXIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVK 120
M Q P + IQF MLLWFL VK+ +PD+FLVQNPPSVPTL+AVK
Sbjct: 61 MAQ-PRFIQYFPKILYPVTLLLKAFIQFTMLLWFLFVKVPAPDIFLVQNPPSVPTLIAVK 119
Query: 121 WASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHE 180
WASS RR+AF+VDWHNFGYTLL+LSLGR + VS+YRW E +YGKMA G LCVT+AMQHE
Sbjct: 120 WASSWRRAAFVVDWHNFGYTLLALSLGRNNLLVSLYRWSENHYGKMATGSLCVTKAMQHE 179
Query: 181 LAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKAD 240
L QNWG++A VLYDQPPEFF P LEE+HELFCR+ K L P+GV D +S +E Q+ +
Sbjct: 180 LDQNWGVRAKVLYDQPPEFFRPALLEERHELFCRVRKDLCHPIGVYDFISRE-LENQELN 238
Query: 241 ETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNE 300
ET+FT+ D+ LK NRPALVVSSTSWTPDE+FGILLEAA+MYDRRVAA S
Sbjct: 239 ETLFTTKFNADISLKQNRPALVVSSTSWTPDENFGILLEAAVMYDRRVAA-----RSKGS 293
Query: 301 EVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLL 360
E EIS+ +Q+ YP LLFIITGKGP+KE YEEKI+RL L+ VAFRTMWL+AEDYPLLL
Sbjct: 294 ET--AEISE-EQHHYPNLLFIITGKGPEKEMYEEKIKRLNLRHVAFRTMWLAAEDYPLLL 350
Query: 361 GSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELA 420
GSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVC+VSYSCI+ELVK KNGLLFSSSSELA
Sbjct: 351 GSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCSVSYSCIQELVKDGKNGLLFSSSSELA 410
Query: 421 DQLLMLFKGF 430
DQLL+ F
Sbjct: 411 DQLLVSNSSF 420
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| ZFIN|ZDB-GENE-030131-6093 alg1 "asparagine-linked glycosylation 1 homolog (yeast, beta-1,4-mannosyltransferase)" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 517 (187.1 bits), Expect = 4.3e-94, Sum P(2) = 4.3e-94
Identities = 115/282 (40%), Positives = 163/282 (57%)
Query: 8 CVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTI 67
CV+VLGD+GRSPRMQY ALSL++ V ++ + G+KPH ILE I I +++
Sbjct: 58 CVLVLGDIGRSPRMQYHALSLSKH-GYNVTIIGFLGTKPHQDILEDDRIDILPISEL--- 113
Query: 68 PRGXXXXXXXXXXXXXXXIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKW-ASSLR 126
+G +Q F LL+ L + I L+QNPP +P +AV W AS +R
Sbjct: 114 -KGLTVGPRIFRYISKVTLQSFQLLYVL-MTIEDQGYILMQNPPGLPA-IAVTWMASRIR 170
Query: 127 RSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQNWG 186
+ FI+DWHN+GYT+++LS G V + +W EK +G +++ LCVT AM+ +L +NW
Sbjct: 171 GNQFIIDWHNYGYTIMALSHGENHLIVRLAKWYEKIFGCLSDHNLCVTSAMREDLCKNWN 230
Query: 187 IKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTS 246
I+AT LYD+PP F T L+ +HELF R+ + P V+ ME E +
Sbjct: 231 IEATTLYDKPPSIFRETPLKLQHELFVRMGSA-YLPFRPSSAVTKEYMELTAFTER--NT 287
Query: 247 LAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRV 288
G V RPAL++SSTSWT DEDF +LL+A Y++ V
Sbjct: 288 QTGA-VTRSAGRPALLISSTSWTEDEDFSVLLQALEEYEKFV 328
|
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| UNIPROTKB|E1BRK4 ALG1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 481 (174.4 bits), Expect = 4.9e-91, Sum P(2) = 4.9e-91
Identities = 111/285 (38%), Positives = 164/285 (57%)
Query: 5 GRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQW 64
GR CV VLGDLGRSPRMQY ALSLAR V ++ Y ++PH +L I + +++
Sbjct: 30 GRVCVAVLGDLGRSPRMQYHALSLARH-GRGVALLGYFQTRPHRDVLSSGEIRVVPLSEL 88
Query: 65 PTIPRGXXXXXXXXXXXXXXXIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASS 124
+ G Q LL+ + +++ P L+QNPP +P+ +AV W +
Sbjct: 89 RCLRVGPKLFQYVVKVVA----QTVQLLYTM-LRMDPPSYVLLQNPPGLPS-IAVAWVAC 142
Query: 125 LR-RSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQ 183
L RS I+DWHN+GYT++SL+ GR V I +W EK +G++++ LCVT AM+ +L
Sbjct: 143 LFWRSKLIIDWHNYGYTIMSLNHGRNHPLVLIAKWYEKLFGRLSDYNLCVTDAMKEDLWV 202
Query: 184 NWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETI 243
N IKA LYD+P +F T LE +H+L+ +L K ++P + + +++ T
Sbjct: 203 NCNIKAVTLYDRPASYFKETPLELQHQLYLKLAKD-YEPF--KPHTESVSWNAERSAFTE 259
Query: 244 FTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRV 288
+G DV RPAL++SSTSWT DEDF +LL+A Y++ V
Sbjct: 260 RDEKSG-DVIKSRGRPALLISSTSWTEDEDFSVLLKALEDYEQYV 303
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| MGI|MGI:2384774 Alg1 "asparagine-linked glycosylation 1 (beta-1,4-mannosyltransferase)" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 472 (171.2 bits), Expect = 6.3e-89, Sum P(2) = 6.3e-89
Identities = 110/287 (38%), Positives = 161/287 (56%)
Query: 2 GRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTM 61
GR VVVLGD+GRSPRMQY ALSLA Q V ++ + SKP +L++ I I +
Sbjct: 30 GRARHMVVVVLGDVGRSPRMQYHALSLA-QSGFSVTLLGFYNSKPRDELLQNDRIRIVKL 88
Query: 62 TQWPTIPRGXXXXXXXXXXXXXXXIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKW 121
T RG Q LLW + + +FL QNPP +P +AV W
Sbjct: 89 TDL----RGLGAGPRILQYGVKVVFQAVYLLWKMMRMDPAAYIFL-QNPPGLPA-IAVCW 142
Query: 122 -ASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHE 180
+ S ++DWHN+GY+++ L G R V + +W EK++G++++ LCVT AM+ +
Sbjct: 143 FVGCICGSKLVIDWHNYGYSIMGLVHGPRHPIVLLAKWYEKFFGRLSHLNLCVTNAMRED 202
Query: 181 LAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKAD 240
LA+NW ++A LYD+P FF T L+ +HELF +L+ + P Q C + + +++
Sbjct: 203 LAENWCVRAVTLYDKPASFFKETPLDLQHELFMKLSHT-YSPF--QSCSDPSHPDTERSA 259
Query: 241 ETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRR 287
T +G+ V RPAL+VSSTSWT DEDF ILL A ++++
Sbjct: 260 FTERDCQSGV-VRRLHGRPALLVSSTSWTEDEDFSILLRALEKFEQQ 305
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| UNIPROTKB|Q9BT22 ALG1 "Chitobiosyldiphosphodolichol beta-mannosyltransferase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 467 (169.5 bits), Expect = 2.7e-88, Sum P(2) = 2.7e-88
Identities = 112/291 (38%), Positives = 162/291 (55%)
Query: 3 RRGRAC----VVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHI 58
RRGRA VVLGD+GRSPRMQY ALSLA V ++ + SKPH +L++ I I
Sbjct: 27 RRGRAARHVVAVVLGDVGRSPRMQYHALSLAMH-GFSVTLLGFCNSKPHDELLQNNRIQI 85
Query: 59 HTMTQWPTIPRGXXXXXXXXXXXXXXXIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVA 118
+T+ ++ G +Q LLW L + +FL QNPP +P+ +A
Sbjct: 86 VGLTELQSLAVGPRVFQYGVKVV----LQAMYLLWKLMWREPGAYIFL-QNPPGLPS-IA 139
Query: 119 VKW-ASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAM 177
V W L S ++DWHN+GY+++ L G V + +W EK++G++++ LCVT AM
Sbjct: 140 VCWFVGCLCGSKLVIDWHNYGYSIMGLVHGPNHPLVLLAKWYEKFFGRLSHLNLCVTNAM 199
Query: 178 QHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQ 237
+ +LA NW I+A +YD+P FF T L+ +H LF +L +H P + + E
Sbjct: 200 REDLADNWHIRAVTVYDKPASFFKETPLDLQHRLFMKLGS-MHSPFRAR-----SEPEDP 253
Query: 238 KADETIFTSL-AGIDVFLK-PNRPALVVSSTSWTPDEDFGILLEAALMYDR 286
+ + FT AG + + RPAL+VSSTSWT DEDF ILL A +++
Sbjct: 254 VTERSAFTERDAGSGLVTRLRERPALLVSSTSWTEDEDFSILLAALEKFEQ 304
|
|
| FB|FBgn0038552 CG18012 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 504 (182.5 bits), Expect = 3.5e-88, Sum P(2) = 3.5e-88
Identities = 113/291 (38%), Positives = 161/291 (55%)
Query: 3 RRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMT 62
++ ACV+VLGD+GRSPRMQY A SL + + VD++ Y ++P + +HP IH +T
Sbjct: 7 KKRNACVIVLGDIGRSPRMQYHAQSLLEE-NYHVDMIGYLETRPLEELTQHPRCRIHELT 65
Query: 63 QWPTIPRGXXXXXXXXXXXXXXXIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWA 122
P Q LL L + I P LVQNPP +PTL+
Sbjct: 66 AVPV-----TNLTPKLRLLFKAFWQTLSLLMAL-ISIGRPSFLLVQNPPGIPTLIVCYLY 119
Query: 123 SSLRRSAFIVDWHNFGYTLLSLSL--GRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHE 180
++ R+ +DWHN+ YT+L+L + G +S + + R +E+Y+G A+ CVT+AMQ +
Sbjct: 120 CAVTRTKLAIDWHNYTYTVLALGMSKGEQSPLIRLVRRLERYFGSKAHTHFCVTRAMQED 179
Query: 181 LAQNWGI-KATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKA 239
L QNWGI VLYD+ P FHP L KHEL+ +L K Q +D + +E
Sbjct: 180 LQQNWGIGPVKVLYDRAPAQFHPIDLTHKHELYLKLAKDYPQ-FQAKDAEQSDVLEATAL 238
Query: 240 DETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAA 290
+ + +G+ V +P R A++VSSTSWTPDEDFGILL+A Y+ A
Sbjct: 239 TQKL---ASGV-VQYRPQRQAVLVSSTSWTPDEDFGILLKALQAYEETAQA 285
|
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| RGD|1310700 Alg1 "ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 470 (170.5 bits), Expect = 4.4e-88, Sum P(2) = 4.4e-88
Identities = 110/287 (38%), Positives = 161/287 (56%)
Query: 2 GRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTM 61
GR VVVLGD+GRSPRMQY ALSLA Q V ++ + SKP +L+ I I +
Sbjct: 30 GRARHVVVVVLGDVGRSPRMQYHALSLA-QSGFSVTLLGFYNSKPRDELLQSDRIQIVKL 88
Query: 62 TQWPTIPRGXXXXXXXXXXXXXXXIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKW 121
T RG Q LLW + + +FL QNPP +P +AV W
Sbjct: 89 TDL----RGLGAGPRILQYGVKVVFQAVYLLWKMMRTDPAAYIFL-QNPPGLPA-IAVCW 142
Query: 122 -ASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHE 180
+ S ++DWHN+GY+++ L G R V + +W EK++G++++ LCVT AM+ +
Sbjct: 143 FVCCICGSKLVIDWHNYGYSIMGLVHGPRHPIVLLAKWYEKFFGRLSHLNLCVTHAMRED 202
Query: 181 LAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKAD 240
LA+NW ++A LYD+P FF T L+ +HELF +L++ + P Q C + + +++
Sbjct: 203 LAENWCLRAVTLYDKPASFFKETPLDLQHELFMKLSRT-YSPF--QSCSEPSDPDTERSA 259
Query: 241 ETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRR 287
T S + + V RPAL+VSSTSWT DEDF ILL A ++++
Sbjct: 260 FTERDSQSRV-VRRLHGRPALLVSSTSWTEDEDFSILLRALEKFEQQ 305
|
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| UNIPROTKB|D4A5S6 Alg1 "Protein Alg1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 470 (170.5 bits), Expect = 4.4e-88, Sum P(2) = 4.4e-88
Identities = 110/287 (38%), Positives = 161/287 (56%)
Query: 2 GRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTM 61
GR VVVLGD+GRSPRMQY ALSLA Q V ++ + SKP +L+ I I +
Sbjct: 30 GRARHVVVVVLGDVGRSPRMQYHALSLA-QSGFSVTLLGFYNSKPRDELLQSDRIQIVKL 88
Query: 62 TQWPTIPRGXXXXXXXXXXXXXXXIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKW 121
T RG Q LLW + + +FL QNPP +P +AV W
Sbjct: 89 TDL----RGLGAGPRILQYGVKVVFQAVYLLWKMMRTDPAAYIFL-QNPPGLPA-IAVCW 142
Query: 122 -ASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHE 180
+ S ++DWHN+GY+++ L G R V + +W EK++G++++ LCVT AM+ +
Sbjct: 143 FVCCICGSKLVIDWHNYGYSIMGLVHGPRHPIVLLAKWYEKFFGRLSHLNLCVTHAMRED 202
Query: 181 LAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKAD 240
LA+NW ++A LYD+P FF T L+ +HELF +L++ + P Q C + + +++
Sbjct: 203 LAENWCLRAVTLYDKPASFFKETPLDLQHELFMKLSRT-YSPF--QSCSEPSDPDTERSA 259
Query: 241 ETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRR 287
T S + + V RPAL+VSSTSWT DEDF ILL A ++++
Sbjct: 260 FTERDSQSRV-VRRLHGRPALLVSSTSWTEDEDFSILLRALEKFEQQ 305
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| UNIPROTKB|F1N2J7 ALG1 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 477 (173.0 bits), Expect = 5.6e-88, Sum P(2) = 5.6e-88
Identities = 114/289 (39%), Positives = 164/289 (56%)
Query: 2 GRRGR-ACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHT 60
GR R VVVLGD+GRSPRMQY ALSLA+ V ++ + SKPH +L+ I I
Sbjct: 29 GRTARHVIVVVLGDVGRSPRMQYHALSLAKS-GFSVTLLGFCNSKPHDELLQSDKIQIVG 87
Query: 61 MTQWPTIPRGXXXXXXXXXXXXXXXIQFFMLLW-FLCVKIASPDVFLVQNPPSVPTLVAV 119
+T + G Q LLW +C + A+ +FL QNPP +P +V
Sbjct: 88 LTDLQRLAVGPHVLQYGVKVV----FQAVHLLWKLMCTEPAAY-IFL-QNPPGLPAIVVC 141
Query: 120 KWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179
+A LR S +VDWHN+GY+++ L G V + +W EK G++++ LCVT AM+
Sbjct: 142 WFAGCLRGSKLVVDWHNYGYSIMGLVHGPSHPLVLLAKWYEKLCGRLSHLNLCVTNAMRD 201
Query: 180 ELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKA 239
+LA+NWGIKA +YD+P FF T L+ +H+LF +L+ P+ + C ++ +++
Sbjct: 202 DLAENWGIKAVTVYDKPASFFKETPLDLQHQLFVKLSHTY--PV-FRACSESSDPGTERS 258
Query: 240 DETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRV 288
T +L+G L RPAL+VSSTSWT DEDF ILL A ++ +
Sbjct: 259 AFTERDALSGAVTHLC-GRPALLVSSTSWTEDEDFSILLAALEKFEHLI 306
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| UNIPROTKB|F1RKX2 LOC100524193 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 476 (172.6 bits), Expect = 3.9e-87, Sum P(2) = 3.9e-87
Identities = 114/298 (38%), Positives = 169/298 (56%)
Query: 2 GRRGR-ACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHT 60
GR R VVVLGDLGRSPRMQY ALSLA+ V ++ + S+P +L+ I I +
Sbjct: 33 GRASRHVMVVVLGDLGRSPRMQYHALSLAKN-GFSVTLLGFCNSRPREELLQSDRIQIVS 91
Query: 61 MTQWPTIPRGXXXXXXXXXXXXXXXIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVK 120
+T+ P + G Q LLW L + + +FL QNPP +P +AV
Sbjct: 92 LTELPRLTVGPHILQYGVKVV----FQAVHLLWKLMCRDPAAYIFL-QNPPGLPA-IAVC 145
Query: 121 W-ASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179
W A+ L S ++DWHN+GY+++ L G V + +W EK G++++ LCVT AM+
Sbjct: 146 WFAACLCGSKLVIDWHNYGYSIMGLVHGPGHRLVLLAKWYEKLCGRLSHLNLCVTNAMRE 205
Query: 180 ELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKA 239
+LA+NWGIKA +YD+P FF T L+ +H+LF +L++I + + S+ ME
Sbjct: 206 DLAENWGIKAVTVYDKPASFFKETPLDLQHQLFMKLSRI-YSVFRARSEPSDLDMERSAF 264
Query: 240 DETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDS 297
E + + + L RPAL+VSSTSWT DEDF +LL A +++ ++N+ +S
Sbjct: 265 TER--DAQSAVVTHLH-GRPALLVSSTSWTEDEDFSVLLAALEKFEQ----LINDGES 315
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| P16661 | ALG1_YEAST | 2, ., 4, ., 1, ., 1, 4, 2 | 0.3404 | 0.8481 | 0.8953 | yes | no |
| Q9BT22 | ALG1_HUMAN | 2, ., 4, ., 1, ., 1, 4, 2 | 0.4249 | 0.9092 | 0.9288 | yes | no |
| Q6FLZ2 | ALG1_CANGA | 2, ., 4, ., 1, ., 1, 4, 2 | 0.3305 | 0.8354 | 0.88 | yes | no |
| Q75BA5 | ALG1_ASHGO | 2, ., 4, ., 1, ., 1, 4, 2 | 0.3399 | 0.8248 | 0.8301 | yes | no |
| O13933 | ALG1_SCHPO | 2, ., 4, ., 1, ., 1, 4, 2 | 0.3760 | 0.8248 | 0.9221 | yes | no |
| Q6BS98 | ALG1_DEBHA | 2, ., 4, ., 1, ., 1, 4, 2 | 0.3326 | 0.8354 | 0.8389 | yes | no |
| P90522 | ALG1_DICDI | 2, ., 4, ., 1, ., 1, 4, 2 | 0.3922 | 0.8459 | 0.8133 | yes | no |
| Q5R7A2 | ALG1_PONAB | 2, ., 4, ., 1, ., 1, 4, 2 | 0.4212 | 0.9156 | 0.9353 | yes | no |
| Q6CVU2 | ALG1_KLULA | 2, ., 4, ., 1, ., 1, 4, 2 | 0.3318 | 0.8206 | 0.8702 | yes | no |
| Q6C3K2 | ALG1_YARLI | 2, ., 4, ., 1, ., 1, 4, 2 | 0.3661 | 0.8438 | 0.8639 | yes | no |
| Q921Q3 | ALG1_MOUSE | 2, ., 4, ., 1, ., 1, 4, 2 | 0.4227 | 0.9156 | 0.9004 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.4.1 | 0.921 |
| 4th Layer | 2.4.1.142 | 0.914 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | eugene3.01460030 | transferase, transferring glycosyl groups (EC-2.4.1.142) (481 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
 | estExt_fgenesh4_pg.C_LG_I2082 | hypothetical protein (233 aa) | • | • | 0.953 | ||||||
 | eugene3.00110811 | hypothetical protein (413 aa) | • | • | • | 0.950 | |||||
 | estExt_fgenesh4_pg.C_290241 | hypothetical protein (80 aa) | • | • | 0.931 | ||||||
 | fgenesh4_pg.C_scaffold_70000216 | hypothetical protein (179 aa) | • | • | 0.924 | ||||||
 | eugene3.00130240 | hypothetical protein (179 aa) | • | • | 0.921 | ||||||
 | fgenesh4_pm.C_LG_V000700 | dolichyl-phosphate beta-D-mannosyltransferase (EC-2.4.1.83) (238 aa) | • | • | 0.913 | ||||||
 | estExt_Genewise1_v1.C_LG_II0203 | dolichyl-phosphate beta-D-mannosyltransferase (EC-2.4.1.83) (240 aa) | • | • | 0.913 | ||||||
 | fgenesh4_pg.C_LG_II002473 | hypothetical protein (89 aa) | • | 0.899 | |||||||
 | grail3.0049024601 | hypothetical protein (361 aa) | • | • | • | 0.813 | |||||
 | estExt_fgenesh4_pg.C_LG_VI0713 | hypothetical protein (362 aa) | • | • | • | 0.813 | |||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 474 | |||
| PLN02275 | 371 | PLN02275, PLN02275, transferase, transferring glyc | 0.0 | |
| cd03816 | 415 | cd03816, GT1_ALG1_like, This family is most closel | 0.0 | |
| cd03794 | 394 | cd03794, GT1_wbuB_like, This family is most closel | 4e-13 | |
| pfam13692 | 134 | pfam13692, Glyco_trans_1_4, Glycosyl transferases | 3e-10 | |
| cd03817 | 374 | cd03817, GT1_UGDG_like, This family is most closel | 3e-10 | |
| COG0438 | 381 | COG0438, RfaG, Glycosyltransferase [Cell envelope | 7e-10 | |
| cd01635 | 229 | cd01635, Glycosyltransferase_GTB_type, Glycosyltra | 8e-10 | |
| cd03801 | 374 | cd03801, GT1_YqgM_like, This family is most closel | 1e-08 | |
| cd03798 | 377 | cd03798, GT1_wlbH_like, This family is most closel | 5e-07 | |
| cd03822 | 366 | cd03822, GT1_ecORF704_like, This family is most cl | 7e-07 | |
| cd03801 | 374 | cd03801, GT1_YqgM_like, This family is most closel | 1e-06 | |
| pfam00534 | 158 | pfam00534, Glycos_transf_1, Glycosyl transferases | 5e-05 | |
| pfam13579 | 158 | pfam13579, Glyco_trans_4_4, Glycosyl transferase 4 | 1e-04 | |
| cd03820 | 348 | cd03820, GT1_amsD_like, This family is most closel | 3e-04 | |
| cd03798 | 377 | cd03798, GT1_wlbH_like, This family is most closel | 4e-04 | |
| cd05844 | 367 | cd05844, GT1_like_7, Glycosyltransferases catalyze | 4e-04 | |
| TIGR03088 | 374 | TIGR03088, stp2, sugar transferase, PEP-CTERM/EpsH | 4e-04 | |
| cd03799 | 355 | cd03799, GT1_amsK_like, This is a family of GT1 gl | 0.002 | |
| pfam13524 | 92 | pfam13524, Glyco_trans_1_2, Glycosyl transferases | 0.003 |
| >gnl|CDD|215155 PLN02275, PLN02275, transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Score = 695 bits (1795), Expect = 0.0
Identities = 294/427 (68%), Positives = 316/427 (74%), Gaps = 56/427 (13%)
Query: 1 MGRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHT 60
MGRRGRA VVVLGD GRSPRMQY ALSLARQ S +VDVVAYGGS+P A+L HPSIHIH
Sbjct: 1 MGRRGRAAVVVLGDFGRSPRMQYHALSLARQASFQVDVVAYGGSEPIPALLNHPSIHIHL 60
Query: 61 MTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVK 120
M Q P + + LP+VL + LLLK IQF MLLWFLCVKI PDVFLVQNPPSVPTL VK
Sbjct: 61 MVQ-PRLLQRLPRVLYALALLLKVAIQFLMLLWFLCVKIPRPDVFLVQNPPSVPTLAVVK 119
Query: 121 WASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHE 180
A LRR+ F++DWHNFGYTLL+LSLGR V +YRW E++YGKMA+G LCVT+AMQHE
Sbjct: 120 LACWLRRAKFVIDWHNFGYTLLALSLGRSHPLVRLYRWYERHYGKMADGHLCVTKAMQHE 179
Query: 181 LAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKAD 240
L QNWGI+ATVLYDQPPEFF P SLE
Sbjct: 180 LDQNWGIRATVLYDQPPEFFRPASLE---------------------------------- 205
Query: 241 ETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNE 300
+ L+PNRPALVVSSTSWTPDEDFGILLEAA+MYDRRVAA LNE DS
Sbjct: 206 -----------IRLRPNRPALVVSSTSWTPDEDFGILLEAAVMYDRRVAARLNESDS--- 251
Query: 301 EVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLL 360
+ GKQ LYPRLLFIITGKGP K YEEKI RL L+ VAFRTMWL AEDYPLLL
Sbjct: 252 -------ASGKQSLYPRLLFIITGKGPQKAMYEEKISRLNLRHVAFRTMWLEAEDYPLLL 304
Query: 361 GSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELA 420
GSADLGV LHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI ELVK KNGLLFSSSSELA
Sbjct: 305 GSADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIGELVKDGKNGLLFSSSSELA 364
Query: 421 DQLLMLF 427
DQLL L
Sbjct: 365 DQLLELL 371
|
Length = 371 |
| >gnl|CDD|99986 cd03816, GT1_ALG1_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 573 bits (1480), Expect = 0.0
Identities = 228/464 (49%), Positives = 282/464 (60%), Gaps = 53/464 (11%)
Query: 4 RGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQ 63
R R CV+VLGD+GRSPRMQY ALSLA+ +VD+V Y + PH IL +P+I IH +
Sbjct: 3 RKRVCVLVLGDIGRSPRMQYHALSLAK-HGWKVDLVGYLETPPHDEILSNPNITIHPL-- 59
Query: 64 WPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWAS 123
P P+ L K+ + LK L QFF LLW L K+ D L+QNPPS+PTL+
Sbjct: 60 -PPPPQRLNKLPFLLFAPLKVLWQFFSLLWLL-YKLRPADYILIQNPPSIPTLLIAWLYC 117
Query: 124 SLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQ 183
LRR+ I+DWHN+GYT+L+L LG V + +W EK +G++A+ LCVT+AM+ +L Q
Sbjct: 118 LLRRTKLIIDWHNYGYTILALKLGENHPLVRLAKWYEKLFGRLADYNLCVTKAMKEDLQQ 177
Query: 184 --NWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADE 241
NW I+ATVLYD+PPE F P LEEKHELF +L K
Sbjct: 178 FNNWKIRATVLYDRPPEQFRPLPLEEKHELFLKLAK-----------------------T 214
Query: 242 TIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEE 301
+ L V L RPAL+VSSTSWTPDEDFGILL+A + Y++ A
Sbjct: 215 FLTRELRIGAVQLSEERPALLVSSTSWTPDEDFGILLDALVAYEKSAA---TGPKL---- 267
Query: 302 VFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLG 361
P+LL IITGKGP KE Y E+I+ L+LK+V RT WLSAEDYP LL
Sbjct: 268 --------------PKLLCIITGKGPLKEKYLERIKELKLKKVTIRTPWLSAEDYPKLLA 313
Query: 362 SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELAD 421
SADLGV LHTSSSGLDLPMKVVDMFGCGLPVCA+ + CI+ELVK +NGL+F S ELA+
Sbjct: 314 SADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCIDELVKHGENGLVFGDSEELAE 373
Query: 422 QLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLI 465
QL+ L FP+ L L+ G E RW W+ PL
Sbjct: 374 QLIDLLSNFPNR-GKLNSLKKGAQEESEL-RWDENWDRVVGPLF 415
|
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. Length = 415 |
| >gnl|CDD|99968 cd03794, GT1_wbuB_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 70.4 bits (173), Expect = 4e-13
Identities = 89/447 (19%), Positives = 154/447 (34%), Gaps = 100/447 (22%)
Query: 14 DLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPS------IHIHTMTQW-PT 66
G + R A L ++ EV V+ + P I + + +H P
Sbjct: 13 LGGGAFRTTELAEELVKR-GHEVTVITGSPNYPSGKIYKGYKREEVDGVRVH----RVPL 67
Query: 67 IPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLR 126
P +LK +L L L L + PDV + +PP + +A + L+
Sbjct: 68 PPYKKNGLLKRLLNYLS---FALSALLALLKRRRRPDVIIATSPP-LLIALAALLLARLK 123
Query: 127 RSAFIVDWHN-FGYTLLSLSLGRRSHF-VSIYRWIEKYYGKMANGCLCVTQAMQHELAQN 184
+ F+++ + + + ++L L + + R +E+ + A+ + ++ M+ E
Sbjct: 124 GAPFVLEVRDLWPESAVALGLLKNGSLLYRLLRKLERLIYRRADAIVVISPGMR-EYLVR 182
Query: 185 WGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIF 244
G+ KI P GV D +F
Sbjct: 183 RGVPP--------------------------EKISVIPNGV--------------DLELF 202
Query: 245 TSLAGIDVFLKPNRPA---LVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEE 301
+ K +V+ + + + LLEAA A+L +
Sbjct: 203 KPPPADESLRKELGLDDKFVVLYAGNIGRAQGLDTLLEAA--------ALLKD------- 247
Query: 302 VFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLG 361
P + F+I G GP+KE +E + L L V F + E+ P LL
Sbjct: 248 -------------RPDIRFLIVGDGPEKEELKELAKALGLDNVTF-LGRVPKEELPELLA 293
Query: 362 SADLGVC--LHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSS--SS 417
+AD+G+ + P K+ + G PV A ELV+ GL+
Sbjct: 294 AADVGLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAELVEEAGAGLVVPPGDPE 353
Query: 418 ELADQLLMLFKGFPDDSDVLKKL-RNG 443
LA +L L DD + ++ NG
Sbjct: 354 ALAAAILELL----DDPEERAEMGENG 376
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. Length = 394 |
| >gnl|CDD|222322 pfam13692, Glyco_trans_1_4, Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Score = 57.7 bits (140), Expect = 3e-10
Identities = 30/128 (23%), Positives = 48/128 (37%), Gaps = 12/128 (9%)
Query: 301 EVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLL 360
L+E + P + I G GP++ + RL V F ED LL
Sbjct: 18 LWLLEEALPLLRKALPDVELHIIGSGPEE------LARL-APNVHFLGFV---EDLAALL 67
Query: 361 GSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELA 420
SAD+ + +G P+K+++ GLPV A + L+ E A
Sbjct: 68 ASADVALAPLRFGAGS--PLKLLEALAAGLPVVATDIGAEGLPEDLGWGVLVADDPEEFA 125
Query: 421 DQLLMLFK 428
+ ++ L
Sbjct: 126 EAIVRLLA 133
|
Length = 134 |
| >gnl|CDD|99987 cd03817, GT1_UGDG_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 61.1 bits (149), Expect = 3e-10
Identities = 41/145 (28%), Positives = 64/145 (44%), Gaps = 6/145 (4%)
Query: 313 YLYPRLLFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHT 371
P + +I G GP++E EE R L L RV F T ++ E+ P +ADL V
Sbjct: 229 KEEPDVKLVIVGDGPEREELEELARELGLADRVIF-TGFVPREELPDYYKAADLFV--FA 285
Query: 372 SSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSE-LADQLLMLFKGF 430
S++ + +++ GLPV AV + +LV +NG LF E LA+ LL L +
Sbjct: 286 STTET-QGLVLLEAMAAGLPVVAVDAPGLPDLVADGENGFLFPPGDEALAEALLRLLQDP 344
Query: 431 PDDSDVLKKLRNGTLEMGLSARWAT 455
+ K + + +
Sbjct: 345 ELRRRLSKNAEESAEKFSFAKKVEK 369
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. Length = 374 |
| >gnl|CDD|223515 COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 60.3 bits (145), Expect = 7e-10
Identities = 79/428 (18%), Positives = 141/428 (32%), Gaps = 97/428 (22%)
Query: 47 HAAILEHPSIHIHTMTQWPTIPRGLPKV---LKPVLLLLKPLIQFFMLLWFLCVKIASPD 103
A L + + G+ + + LL+ L + L L ++ D
Sbjct: 26 KALRLLGRGHEVLVIAPEKLEGLGIEVLRLPSVSLPLLIVRLRPALLRLLLLLKRLLPYD 85
Query: 104 VFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVS--IYRWIEK 161
+ + P + L +V H +L L + + + ++K
Sbjct: 86 IIHAHSLLLAPGGLLALLLLKLLGIPLVVTLHGLIPRILLLPRLLLLLGLLRLLLKRLKK 145
Query: 162 YYGKMANGCLCVTQAMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQ 221
+A+ + V+ A++ L NKI+
Sbjct: 146 ALRLLADRVIAVSPALKELLEALGVP----------------------------NKIVVI 177
Query: 222 PLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAA 281
P G+ D F + A I + + + ++ P++ +L+EAA
Sbjct: 178 PNGI--------------DTEKF-APARIGLLPEGGKFVVLYVGR-LDPEKGLDLLIEAA 221
Query: 282 LMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK-ESYEEKIRRLR 340
+R P + +I G GP++ E E+ ++L
Sbjct: 222 AKLKKR---------------------------GPDIKLVIVGDGPERREELEKLAKKLG 254
Query: 341 LKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI 400
L+ ++ E+ LL SAD V + S S + +++ G PV A I
Sbjct: 255 LEDNVKFLGYVPDEELAELLASAD--VFVLPSLSE-GFGLVLLEAMAAGTPVIASDVGGI 311
Query: 401 EELVKVDKNGLLF--SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATE-- 456
E+V+ + GLL ELAD L L + +LR E+G +AR E
Sbjct: 312 PEVVEDGETGLLVPPGDVEELADALEQLLE--------DPELRE---ELGEAARERVEEE 360
Query: 457 --WEEHAK 462
WE A+
Sbjct: 361 FSWERIAE 368
|
Length = 381 |
| >gnl|CDD|99959 cd01635, Glycosyltransferase_GTB_type, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Score = 58.8 bits (142), Expect = 8e-10
Identities = 34/100 (34%), Positives = 45/100 (45%), Gaps = 4/100 (4%)
Query: 315 YPRLLFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSS 373
P L +I G GP++E EE + L L RV F E LLL +AD V + S
Sbjct: 133 GPDLKLVIAGDGPEREYLEELLAALLLLDRVIFLGGLDPEELLALLLAAAD--VFVLPSL 190
Query: 374 SGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF 413
+ V++ CGLPV A E+V+ GLL
Sbjct: 191 RE-GFGLVVLEAMACGLPVIATDVGGPPEIVEDGLTGLLV 229
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 229 |
| >gnl|CDD|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Score = 56.6 bits (137), Expect = 1e-08
Identities = 47/158 (29%), Positives = 68/158 (43%), Gaps = 28/158 (17%)
Query: 315 YPRLLFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSS 373
YP + +I G GP +E E L L RV F ++ ED P L +AD V + S
Sbjct: 228 YPDVRLVIVGDGPLREELEALAAELGLGDRVTF-LGFVPDEDLPALYAAAD--VFVLPSL 284
Query: 374 S-GLDLPMKVVDMFGCGLPVCAVSYSC--IEELVKVDKNGLLF--SSSSELADQLLMLFK 428
G + +++ GLPV V+ I E+V+ + GLL LA+ +L L
Sbjct: 285 YEG--FGLVLLEAMAAGLPV--VASDVGGIPEVVEDGETGLLVPPGDPEALAEAILRLL- 339
Query: 429 GFPDDSDVLKKLRNGTLEMGLSAR-WATE---WEEHAK 462
DD + LR +G +AR E W+ A
Sbjct: 340 ---DDPE----LRR---RLGEAARERVAERFSWDRVAA 367
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. Length = 374 |
| >gnl|CDD|99971 cd03798, GT1_wlbH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 51.6 bits (124), Expect = 5e-07
Identities = 38/153 (24%), Positives = 60/153 (39%), Gaps = 16/153 (10%)
Query: 315 YPRLLFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSS 373
P + +I G GP +E+ E L L RV F + E+ P +AD+ L +
Sbjct: 231 RPDVHLVIVGDGPLREALEALAAELGLEDRVTF-LGAVPHEEVPAYYAAADV-FVLPSLR 288
Query: 374 SGLDLPMKVVDMFGCGLPVCAVSYSC--IEELVKVDKNGLLF--SSSSELADQLLMLFKG 429
G + +++ CGLPV V+ I E++ +NGLL LA+ +L L
Sbjct: 289 EG--FGLVLLEAMACGLPV--VATDVGGIPEIITDGENGLLVPPGDPEALAEAILRLL-- 342
Query: 430 FPDDSDVLKKLRNGTLEMGLSARWATEWEEHAK 462
L+ R + W E +
Sbjct: 343 ---ADPWLRLGRAARRRVAERFSWENVAERLLE 372
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. Length = 377 |
| >gnl|CDD|99992 cd03822, GT1_ecORF704_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 51.1 bits (123), Expect = 7e-07
Identities = 40/153 (26%), Positives = 61/153 (39%), Gaps = 26/153 (16%)
Query: 315 YPRLLFIITGKG-PDKESYE----EKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVC 368
+P + ++ G+ PD E Y RL L RV F +L E+ P L +AD+ V
Sbjct: 214 HPDVRLLVAGETHPDLERYRGEAYALAERLGLADRVIFINRYLPDEELPELFSAADV-VV 272
Query: 369 L-----HTSSSGLDLPMKVVDM-FGCGLPVCAVSYSCIEELVKVDKNGLL--FSSSSELA 420
L + SG V+ G G PV + EE++ GLL + LA
Sbjct: 273 LPYRSADQTQSG------VLAYAIGFGKPVISTPVGHAEEVLD-GGTGLLVPPGDPAALA 325
Query: 421 DQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARW 453
+ + L D ++ + LR E + W
Sbjct: 326 EAIRRLL----ADPELAQALRARAREYARAMSW 354
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. Length = 366 |
| >gnl|CDD|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Score = 49.7 bits (119), Expect = 1e-06
Identities = 32/201 (15%), Positives = 61/201 (30%), Gaps = 31/201 (15%)
Query: 21 MQYQALSLARQMSL---EVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKP 77
+ L LAR ++ EV V+ G + +
Sbjct: 16 AERHVLELARALAARGHEVTVLTPGDGGLPDEEEVGGIVVVR--------------PPPL 61
Query: 78 VLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNF 137
+ + L+ L ++ DV + ++ L ++ H
Sbjct: 62 LRVRRLLLLLLLALRLRRLLRRERFDVVHAHDWLALLAAALAAR---LLGIPLVLTVHGL 118
Query: 138 GYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQNWGI---KATVLY- 193
+ LG R +E+ + A+ + V++A + EL + G+ K TV+
Sbjct: 119 EFGRPGNELGLLLKL---ARALERRALRRADRIIAVSEATREELRELGGVPPEKITVIPN 175
Query: 194 --DQPPEFFHPTSLEEKHELF 212
D E F P + L
Sbjct: 176 GVD--TERFRPAPRAARRRLG 194
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. Length = 374 |
| >gnl|CDD|215979 pfam00534, Glycos_transf_1, Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Score = 43.4 bits (103), Expect = 5e-05
Identities = 29/116 (25%), Positives = 49/116 (42%), Gaps = 5/116 (4%)
Query: 315 YPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS 374
+P L +I G G +++ ++ +L L+ ++ ED L ADL V S
Sbjct: 31 HPNLKLVIVGDGEEEKKLKKLALKLGLEDNVIFVGFVPDEDLIELYRIADLFV--LPSRY 88
Query: 375 GLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSS--ELADQLLMLFK 428
+ +++ G+PV A E+VK + GLL LA+ + L K
Sbjct: 89 E-GFGLVLLEAMAAGVPVIATDVGGPAEIVKDGETGLLVDPGDAEALAEAIEKLLK 143
|
Mutations in this domain of human PIGA lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family. Length = 158 |
| >gnl|CDD|222237 pfam13579, Glyco_trans_4_4, Glycosyl transferase 4-like domain | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 1e-04
Identities = 37/172 (21%), Positives = 60/172 (34%), Gaps = 28/172 (16%)
Query: 21 MQYQALSLARQMS---LEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKP 77
+ L LAR ++ EV VV G P LE + +H + P R
Sbjct: 3 AERYVLELARALAARGHEVTVVTPRGP-PGRPELEEDGVRVHRL---PVPRRPSL----- 53
Query: 78 VLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNF 137
L+ L + LL + PDV P + + + A+ R +V H
Sbjct: 54 -PGDLRALRRLRRLL-----RRERPDVVHAHGPLA---GLLARLAARRRGVPVVVTPHGL 104
Query: 138 GYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQNWGIKA 189
S R + R +E+ + A+ + V++A L G+ A
Sbjct: 105 ALRQGSGLKRR------LARALERRLLRRADAVVAVSEAEAELLRA-LGVPA 149
|
Length = 158 |
| >gnl|CDD|99990 cd03820, GT1_amsD_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 42.6 bits (101), Expect = 3e-04
Identities = 38/128 (29%), Positives = 59/128 (46%), Gaps = 20/128 (15%)
Query: 320 FIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS-GLD 377
I G GP++E+ E I+ L L RV + E+Y A + L TS G
Sbjct: 212 LRIVGDGPEREALEALIKELGLEDRVILLGFTKNIEEY---YAKASI-FVL-TSRFEG-- 264
Query: 378 LPMKVVDMFGCGLPVCAVSYSC---IEELVKVDKNGLLF--SSSSELADQLLMLFKGFPD 432
PM +++ GLPV +S+ C E+++ NGLL LA+ LL L +
Sbjct: 265 FPMVLLEAMAFGLPV--ISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRLME---- 318
Query: 433 DSDVLKKL 440
D ++ K++
Sbjct: 319 DEELRKRM 326
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. Length = 348 |
| >gnl|CDD|99971 cd03798, GT1_wlbH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 4e-04
Identities = 42/209 (20%), Positives = 69/209 (33%), Gaps = 24/209 (11%)
Query: 16 GRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVL 75
G ++ A +LA++ +EV V+A G P L + L K
Sbjct: 15 GGGIFVKELARALAKR-GVEVTVLAPGPWGPKLLDLLKGRLVGVERLPVLLPVVPLLKGP 73
Query: 76 KPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWH 135
LL + L++ L F PD+ + P A +V H
Sbjct: 74 LLYLLAARALLKLLKLKRF------RPDLIHAHF--AYPDGFAAALLKRKLGIPLVVTLH 125
Query: 136 NFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQNWGI--KATVLY 193
LL + R + + + A+ + V++A+ EL K TV+
Sbjct: 126 GSDVNLLP--------RKRLLRALLRRALRRADAVIAVSEALADELKALGIDPEKVTVIP 177
Query: 194 ---DQPPEFFHPTSLEEKHELFCRLNKIL 219
D E F P E +L +K +
Sbjct: 178 NGVD--TERFSPADRAEARKLGLPEDKKV 204
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. Length = 377 |
| >gnl|CDD|100003 cd05844, GT1_like_7, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Score = 42.2 bits (100), Expect = 4e-04
Identities = 40/147 (27%), Positives = 57/147 (38%), Gaps = 28/147 (19%)
Query: 316 PRLLFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLH--TS 372
RL+ I G GP + E R L L RV F + L+ A + T+
Sbjct: 220 VRLVII--GDGPLLAALEALARALGLGGRVTFLG-AQPHAEVRELMRRARI-FLQPSVTA 275
Query: 373 SSGLD---LPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF--SSSSELADQLLMLF 427
SG D LP+ +++ G+PV A + I E V+ + GLL + LA L L
Sbjct: 276 PSG-DAEGLPVVLLEAQASGVPVVATRHGGIPEAVEDGETGLLVPEGDVAALAAALGRL- 333
Query: 428 KGFPDDSDVLKKLRNGTL--EMGLSAR 452
L + L MG + R
Sbjct: 334 ------------LADPDLRARMGAAGR 348
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 367 |
| >gnl|CDD|132132 TIGR03088, stp2, sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 4e-04
Identities = 32/113 (28%), Positives = 46/113 (40%), Gaps = 11/113 (9%)
Query: 316 PRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAE--DYPLLLGSADLGVCLHTSS 373
RL +I G GP + + E+ +R L + WL E D P L+ + DL V S
Sbjct: 228 ERLRLVIVGDGPARGACEQMVRAAGLAHLV----WLPGERDDVPALMQALDLFV---LPS 280
Query: 374 SGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSS--ELADQLL 424
+ +++ GLPV A + ELV+ G L LA L
Sbjct: 281 LAEGISNTILEAMASGLPVIATAVGGNPELVQHGVTGALVPPGDAVALARALQ 333
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. Length = 374 |
| >gnl|CDD|99972 cd03799, GT1_amsK_like, This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Score = 40.2 bits (95), Expect = 0.002
Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 5/95 (5%)
Query: 322 ITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGV--CLHTSSSGLD- 377
I G GP ++ E I L L RV S E+ LL +ADL V + + +
Sbjct: 215 IVGDGPLRDELEALIAELGLEDRVTL-LGAKSQEEVRELLRAADLFVLPSVTAADGDREG 273
Query: 378 LPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLL 412
LP+ +++ GLPV + S I ELV+ + GLL
Sbjct: 274 LPVVLMEAMAMGLPVISTDVSGIPELVEDGETGLL 308
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. Length = 355 |
| >gnl|CDD|222197 pfam13524, Glyco_trans_1_2, Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Score = 36.8 bits (86), Expect = 0.003
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 367 VCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELADQL 423
+ L+ S M+V + CG P+ +EEL + + +L+ ELA++L
Sbjct: 1 IVLNPSRRD-SPNMRVFEAAACGAPLLTDRTPGLEELFEPGEEIVLYRDPEELAEKL 56
|
Length = 92 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 474 | |||
| KOG2941 | 444 | consensus Beta-1,4-mannosyltransferase [Posttransl | 100.0 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related | 100.0 | |
| PLN02275 | 371 | transferase, transferring glycosyl groups | 100.0 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 100.0 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino | 100.0 | |
| PLN02871 | 465 | UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | 100.0 | |
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system ass | 100.0 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related | 100.0 | |
| cd03805 | 392 | GT1_ALG2_like This family is most closely related | 100.0 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to | 100.0 | |
| TIGR02472 | 439 | sucr_P_syn_N sucrose-phosphate synthase, putative, | 100.0 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely r | 100.0 | |
| PRK15427 | 406 | colanic acid biosynthesis glycosyltransferase WcaL | 100.0 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related | 100.0 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 100.0 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related | 100.0 | |
| TIGR02149 | 388 | glgA_Coryne glycogen synthase, Corynebacterium fam | 100.0 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the trans | 100.0 | |
| PRK00654 | 466 | glgA glycogen synthase; Provisional | 100.0 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related | 100.0 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 100.0 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to | 100.0 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to | 100.0 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related | 100.0 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related | 100.0 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related | 100.0 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related | 100.0 | |
| TIGR02095 | 473 | glgA glycogen/starch synthases, ADP-glucose type. | 100.0 | |
| cd04951 | 360 | GT1_WbdM_like This family is most closely related | 100.0 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to | 100.0 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltran | 100.0 | |
| PRK15484 | 380 | lipopolysaccharide 1,2-N-acetylglucosaminetransfer | 100.0 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 100.0 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related | 100.0 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related | 100.0 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely rela | 100.0 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related | 100.0 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 100.0 | |
| TIGR02470 | 784 | sucr_synth sucrose synthase. This model represents | 100.0 | |
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is mo | 100.0 | |
| PRK14099 | 485 | glycogen synthase; Provisional | 100.0 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylas | 100.0 | |
| PLN02846 | 462 | digalactosyldiacylglycerol synthase | 99.98 | |
| PLN02949 | 463 | transferase, transferring glycosyl groups | 99.98 | |
| PLN02316 | 1036 | synthase/transferase | 99.98 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related | 99.97 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely relate | 99.97 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to | 99.97 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related | 99.97 | |
| PRK14098 | 489 | glycogen synthase; Provisional | 99.97 | |
| PLN00142 | 815 | sucrose synthase | 99.97 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related | 99.97 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related | 99.97 | |
| PRK15490 | 578 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.97 | |
| PRK09922 | 359 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D | 99.97 | |
| TIGR03087 | 397 | stp1 sugar transferase, PEP-CTERM/EpsH1 system ass | 99.97 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related | 99.97 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related | 99.97 | |
| TIGR02918 | 500 | accessory Sec system glycosylation protein GtfA. M | 99.97 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related | 99.96 | |
| PRK10125 | 405 | putative glycosyl transferase; Provisional | 99.96 | |
| PLN02501 | 794 | digalactosyldiacylglycerol synthase | 99.96 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related | 99.96 | |
| cd04950 | 373 | GT1_like_1 Glycosyltransferases catalyze the trans | 99.94 | |
| KOG1111 | 426 | consensus N-acetylglucosaminyltransferase complex, | 99.94 | |
| PHA01630 | 331 | putative group 1 glycosyl transferase | 99.94 | |
| cd03785 | 350 | GT1_MurG MurG is an N-acetylglucosaminyltransferas | 99.93 | |
| PRK00726 | 357 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.93 | |
| PRK05749 | 425 | 3-deoxy-D-manno-octulosonic-acid transferase; Revi | 99.93 | |
| TIGR01133 | 348 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.92 | |
| PHA01633 | 335 | putative glycosyl transferase group 1 | 99.91 | |
| PRK09814 | 333 | beta-1,6-galactofuranosyltransferase; Provisional | 99.89 | |
| cd03793 | 590 | GT1_Glycogen_synthase_GSY2_like Glycogen synthase, | 99.89 | |
| PRK13609 | 380 | diacylglycerol glucosyltransferase; Provisional | 99.89 | |
| PF00534 | 172 | Glycos_transf_1: Glycosyl transferases group 1; In | 99.87 | |
| cd03788 | 460 | GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a | 99.86 | |
| PLN02605 | 382 | monogalactosyldiacylglycerol synthase | 99.85 | |
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases | 99.84 | |
| TIGR02400 | 456 | trehalose_OtsA alpha,alpha-trehalose-phosphate syn | 99.84 | |
| PRK00025 | 380 | lpxB lipid-A-disaccharide synthase; Reviewed | 99.83 | |
| PRK13608 | 391 | diacylglycerol glucosyltransferase; Provisional | 99.83 | |
| KOG1387 | 465 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.81 | |
| COG0297 | 487 | GlgA Glycogen synthase [Carbohydrate transport and | 99.8 | |
| TIGR00236 | 365 | wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras | 99.79 | |
| cd03786 | 363 | GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th | 99.78 | |
| KOG0853 | 495 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.78 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 99.78 | |
| COG0438 | 381 | RfaG Glycosyltransferase [Cell envelope biogenesis | 99.74 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 99.69 | |
| PF13692 | 135 | Glyco_trans_1_4: Glycosyl transferases group 1; PD | 99.68 | |
| TIGR00215 | 385 | lpxB lipid-A-disaccharide synthase. Lipid-A precur | 99.65 | |
| TIGR03713 | 519 | acc_sec_asp1 accessory Sec system protein Asp1. Th | 99.57 | |
| TIGR02398 | 487 | gluc_glyc_Psyn glucosylglycerol-phosphate synthase | 99.53 | |
| COG0707 | 357 | MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami | 99.5 | |
| PRK12446 | 352 | undecaprenyldiphospho-muramoylpentapeptide beta-N- | 99.49 | |
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 99.37 | |
| PF13579 | 160 | Glyco_trans_4_4: Glycosyl transferase 4-like domai | 99.36 | |
| TIGR02094 | 601 | more_P_ylases alpha-glucan phosphorylases. This fa | 99.3 | |
| TIGR03492 | 396 | conserved hypothetical protein. This protein famil | 99.27 | |
| COG1519 | 419 | KdtA 3-deoxy-D-manno-octulosonic-acid transferase | 99.2 | |
| TIGR03568 | 365 | NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, | 99.19 | |
| PF13524 | 92 | Glyco_trans_1_2: Glycosyl transferases group 1 | 99.17 | |
| PF13439 | 177 | Glyco_transf_4: Glycosyltransferase Family 4; PDB: | 99.15 | |
| PF05693 | 633 | Glycogen_syn: Glycogen synthase; InterPro: IPR0086 | 99.13 | |
| TIGR02919 | 438 | accessory Sec system glycosyltransferase GtfB. Mem | 99.1 | |
| PF13528 | 318 | Glyco_trans_1_3: Glycosyl transferase family 1 | 99.09 | |
| cd03784 | 401 | GT1_Gtf_like This family includes the Gtfs, a grou | 99.02 | |
| PF13477 | 139 | Glyco_trans_4_2: Glycosyl transferase 4-like | 98.99 | |
| PF09314 | 185 | DUF1972: Domain of unknown function (DUF1972); Int | 98.97 | |
| TIGR01426 | 392 | MGT glycosyltransferase, MGT family. This model de | 98.91 | |
| cd04299 | 778 | GT1_Glycogen_Phosphorylase_like This family is mos | 98.9 | |
| TIGR03590 | 279 | PseG pseudaminic acid biosynthesis-associated prot | 98.83 | |
| TIGR00661 | 321 | MJ1255 conserved hypothetical protein. This model | 98.65 | |
| PF02350 | 346 | Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; | 98.59 | |
| COG0763 | 381 | LpxB Lipid A disaccharide synthetase [Cell envelop | 98.57 | |
| COG0381 | 383 | WecB UDP-N-acetylglucosamine 2-epimerase [Cell env | 98.55 | |
| PF04464 | 369 | Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate | 98.52 | |
| PF00982 | 474 | Glyco_transf_20: Glycosyltransferase family 20; In | 98.43 | |
| PRK10117 | 474 | trehalose-6-phosphate synthase; Provisional | 98.4 | |
| PF02684 | 373 | LpxB: Lipid-A-disaccharide synthetase; InterPro: I | 98.37 | |
| PRK01021 | 608 | lpxB lipid-A-disaccharide synthase; Reviewed | 98.24 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 98.23 | |
| PF04007 | 335 | DUF354: Protein of unknown function (DUF354); Inte | 98.16 | |
| COG4641 | 373 | Uncharacterized protein conserved in bacteria [Fun | 98.13 | |
| COG1819 | 406 | Glycosyl transferases, related to UDP-glucuronosyl | 98.13 | |
| COG4671 | 400 | Predicted glycosyl transferase [General function p | 98.13 | |
| PF13844 | 468 | Glyco_transf_41: Glycosyl transferase family 41; P | 98.13 | |
| PHA03392 | 507 | egt ecdysteroid UDP-glucosyltransferase; Provision | 98.11 | |
| PLN02448 | 459 | UDP-glycosyltransferase family protein | 98.1 | |
| COG0380 | 486 | OtsA Trehalose-6-phosphate synthase [Carbohydrate | 98.1 | |
| PRK02797 | 322 | 4-alpha-L-fucosyltransferase; Provisional | 98.08 | |
| COG3914 | 620 | Spy Predicted O-linked N-acetylglucosamine transfe | 98.04 | |
| PF07429 | 360 | Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc | 97.95 | |
| PRK10017 | 426 | colanic acid biosynthesis protein; Provisional | 97.94 | |
| PLN02208 | 442 | glycosyltransferase family protein | 97.91 | |
| PLN02173 | 449 | UDP-glucosyl transferase family protein | 97.84 | |
| TIGR02195 | 334 | heptsyl_trn_II lipopolysaccharide heptosyltransfer | 97.75 | |
| PLN02562 | 448 | UDP-glycosyltransferase | 97.7 | |
| PRK10422 | 352 | lipopolysaccharide core biosynthesis protein; Prov | 97.61 | |
| PLN00414 | 446 | glycosyltransferase family protein | 97.57 | |
| PF08323 | 245 | Glyco_transf_5: Starch synthase catalytic domain; | 97.53 | |
| PLN02410 | 451 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 97.51 | |
| COG3660 | 329 | Predicted nucleoside-diphosphate-sugar epimerase [ | 97.23 | |
| TIGR02201 | 344 | heptsyl_trn_III lipopolysaccharide heptosyltransfe | 97.21 | |
| TIGR03609 | 298 | S_layer_CsaB polysaccharide pyruvyl transferase Cs | 97.17 | |
| PLN02210 | 456 | UDP-glucosyl transferase | 97.1 | |
| PF04101 | 167 | Glyco_tran_28_C: Glycosyltransferase family 28 C-t | 97.1 | |
| PRK10916 | 348 | ADP-heptose:LPS heptosyltransferase II; Provisiona | 97.1 | |
| COG1817 | 346 | Uncharacterized protein conserved in archaea [Func | 97.07 | |
| TIGR02193 | 319 | heptsyl_trn_I lipopolysaccharide heptosyltransfera | 96.99 | |
| PLN03007 | 482 | UDP-glucosyltransferase family protein | 96.98 | |
| PRK14089 | 347 | ipid-A-disaccharide synthase; Provisional | 96.96 | |
| PLN02534 | 491 | UDP-glycosyltransferase | 96.96 | |
| cd03789 | 279 | GT1_LPS_heptosyltransferase Lipopolysaccharide hep | 96.91 | |
| COG0859 | 334 | RfaF ADP-heptose:LPS heptosyltransferase [Cell env | 96.66 | |
| PF12000 | 171 | Glyco_trans_4_3: Gkycosyl transferase family 4 gro | 96.51 | |
| PF06258 | 311 | Mito_fiss_Elm1: Mitochondrial fission ELM1; InterP | 96.46 | |
| PF00201 | 500 | UDPGT: UDP-glucoronosyl and UDP-glucosyl transfera | 96.43 | |
| PLN02670 | 472 | transferase, transferring glycosyl groups | 96.22 | |
| PLN02152 | 455 | indole-3-acetate beta-glucosyltransferase | 95.93 | |
| COG0058 | 750 | GlgP Glucan phosphorylase [Carbohydrate transport | 95.92 | |
| PLN02764 | 453 | glycosyltransferase family protein | 95.64 | |
| PLN02555 | 480 | limonoid glucosyltransferase | 95.61 | |
| KOG3742 | 692 | consensus Glycogen synthase [Carbohydrate transpor | 95.49 | |
| PLN00164 | 480 | glucosyltransferase; Provisional | 95.45 | |
| PLN03004 | 451 | UDP-glycosyltransferase | 95.27 | |
| PLN02167 | 475 | UDP-glycosyltransferase family protein | 95.16 | |
| COG3980 | 318 | spsG Spore coat polysaccharide biosynthesis protei | 94.93 | |
| PF04230 | 286 | PS_pyruv_trans: Polysaccharide pyruvyl transferase | 94.86 | |
| PLN02554 | 481 | UDP-glycosyltransferase family protein | 94.81 | |
| PF10087 | 97 | DUF2325: Uncharacterized protein conserved in bact | 94.7 | |
| PF01075 | 247 | Glyco_transf_9: Glycosyltransferase family 9 (hept | 94.36 | |
| PF11997 | 268 | DUF3492: Domain of unknown function (DUF3492); Int | 94.2 | |
| PLN02863 | 477 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 94.09 | |
| PRK14986 | 815 | glycogen phosphorylase; Provisional | 93.98 | |
| PRK10964 | 322 | ADP-heptose:LPS heptosyl transferase I; Provisiona | 93.58 | |
| cd04300 | 797 | GT1_Glycogen_Phosphorylase This is a family of oli | 92.84 | |
| PLN02207 | 468 | UDP-glycosyltransferase | 92.67 | |
| PF00862 | 550 | Sucrose_synth: Sucrose synthase; InterPro: IPR0003 | 92.27 | |
| PF00343 | 713 | Phosphorylase: Carbohydrate phosphorylase; InterPr | 92.24 | |
| TIGR02093 | 794 | P_ylase glycogen/starch/alpha-glucan phosphorylase | 92.04 | |
| PLN03015 | 470 | UDP-glucosyl transferase | 91.72 | |
| PF05159 | 269 | Capsule_synth: Capsule polysaccharide biosynthesis | 90.78 | |
| PRK14985 | 798 | maltodextrin phosphorylase; Provisional | 90.75 | |
| COG2327 | 385 | WcaK Polysaccharide pyruvyl transferase family pro | 90.56 | |
| PF08660 | 170 | Alg14: Oligosaccharide biosynthesis protein Alg14 | 90.17 | |
| PLN02992 | 481 | coniferyl-alcohol glucosyltransferase | 89.88 | |
| KOG1192 | 496 | consensus UDP-glucuronosyl and UDP-glucosyl transf | 89.77 | |
| PF10093 | 374 | DUF2331: Uncharacterized protein conserved in bact | 89.17 | |
| PF08288 | 90 | PIGA: PIGA (GPI anchor biosynthesis); InterPro: IP | 86.46 | |
| PF06925 | 169 | MGDG_synth: Monogalactosyldiacylglycerol (MGDG) sy | 81.55 |
| >KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-67 Score=515.10 Aligned_cols=431 Identities=54% Similarity=0.913 Sum_probs=386.4
Q ss_pred CCCCceEEEEEeCCCCCCchHHHHHHHHHhhCCCeEEEEecCCCCCCcceeccCCeEEEEeecCCCCCCCCCchhHHHHH
Q 011969 1 MGRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLL 80 (474)
Q Consensus 1 m~~~~~~~i~~~~~~g~~~r~~~~a~~l~~~~g~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~ 80 (474)
|++++++||+++||+|+||||+|+|.+||++ |++|++++|.++.++.++.++++|+||.++..+ .....++.+..
T Consensus 9 ~~~k~ra~vvVLGDvGRSPRMqYHA~Sla~~-gf~VdliGy~~s~p~e~l~~hprI~ih~m~~l~----~~~~~p~~~~l 83 (444)
T KOG2941|consen 9 KSKKKRAIVVVLGDVGRSPRMQYHALSLAKL-GFQVDLIGYVESIPLEELLNHPRIRIHGMPNLP----FLQGGPRVLFL 83 (444)
T ss_pred ccccceEEEEEecccCCChHHHHHHHHHHHc-CCeEEEEEecCCCChHHHhcCCceEEEeCCCCc----ccCCCchhhhh
Confidence 5678999999999999999999999999997 999999999999999999999999999999433 23334556668
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhh-hhhhccCCCchHHHHHHHH
Q 011969 81 LLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYT-LLSLSLGRRSHFVSIYRWI 159 (474)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~-~~~~~~~~~~~~~~~~~~~ 159 (474)
..+.++|+.+++|.+.. ...+|+|+++|||++|++.++++++.++|.++++||||++|+ .+....+..++++++.+|+
T Consensus 84 ~lKvf~Qfl~Ll~aL~~-~~~~~~ilvQNPP~iPtliv~~~~~~l~~~KfiIDWHNy~Ysl~l~~~~g~~h~lV~l~~~~ 162 (444)
T KOG2941|consen 84 PLKVFWQFLSLLWALFV-LRPPDIILVQNPPSIPTLIVCVLYSILTGAKFIIDWHNYGYSLQLKLKLGFQHPLVRLVRWL 162 (444)
T ss_pred HHHHHHHHHHHHHHHHh-ccCCcEEEEeCCCCCchHHHHHHHHHHhcceEEEEehhhHHHHHHHhhcCCCCchHHHHHHH
Confidence 89999999999999988 589999999999999999999999999999999999999997 7788889999999999999
Q ss_pred HHHHhhhcCEEEEeCHHHHHHHHHHhCC-ceEEEeCCCCCCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcC
Q 011969 160 EKYYGKMANGCLCVTQAMQHELAQNWGI-KATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQK 238 (474)
Q Consensus 160 e~~~~~~ad~vi~vS~~~~~~l~~~~~~-~~~vi~n~~~~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 238 (474)
|+++.+.||.-+|||++|++++.++||+ ++.++|+.|++ +|++.+++++++.+++...+ +|... .-+.+.
T Consensus 163 E~~fgk~a~~nLcVT~AMr~dL~qnWgi~ra~v~YDrPps--~~~~l~~~H~lf~~l~~d~~------~f~ar-~~q~~~ 233 (444)
T KOG2941|consen 163 EKYFGKLADYNLCVTKAMREDLIQNWGINRAKVLYDRPPS--KPTPLDEQHELFMKLAGDHS------PFRAR-EPQDKA 233 (444)
T ss_pred HHHhhcccccchhhHHHHHHHHHHhcCCceeEEEecCCCC--CCCchhHHHHHHhhhccccc------hhhhc-ccccch
Confidence 9999999999999999999999999997 69999999887 78888899999999874211 22222 123333
Q ss_pred cchhhhhccc-ccccccCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCC
Q 011969 239 ADETIFTSLA-GIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPR 317 (474)
Q Consensus 239 ~~~~~~~~~~-~~~~~~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (474)
-+++.|+... .+++...+++|.+++.+++|++++++.+|++|+..+.++ --+++-.+|.
T Consensus 234 ~~~taf~~k~~s~~v~~~~~~pallvsSTswTpDEdf~ILL~AL~~y~~~--------------------~~~~~~~lP~ 293 (444)
T KOG2941|consen 234 LERTAFTKKDASGDVQLLPERPALLVSSTSWTPDEDFGILLEALVIYEEQ--------------------LYDKTHNLPS 293 (444)
T ss_pred hhhhhHhhhcccchhhhccCCCeEEEecCCCCCcccHHHHHHHHHhhhhh--------------------hhhccCCCCc
Confidence 3447787554 488889999999999999999999999999999987553 1122346899
Q ss_pred EEEEEEeCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecc
Q 011969 318 LLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY 397 (474)
Q Consensus 318 ~~l~ivG~g~~~~~~~~~~~~l~l~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~ 397 (474)
+..+|+|+||.++.+.+.++++.+++|.+...|++.||++.+++.||++||+|++|+|.++|||+++++.||+||||.++
T Consensus 294 llciITGKGPlkE~Y~~~I~~~~~~~v~~~tpWL~aEDYP~ll~saDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~f 373 (444)
T KOG2941|consen 294 LLCIITGKGPLKEKYSQEIHEKNLQHVQVCTPWLEAEDYPKLLASADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNF 373 (444)
T ss_pred EEEEEcCCCchhHHHHHHHHHhcccceeeeecccccccchhHhhccccceEeeecCcccCcchhHHHhhcCCCceeeecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccCCcEEEeCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHH
Q 011969 398 SCIEELVKVDKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITE 467 (474)
Q Consensus 398 ~~~~e~v~~~~~G~l~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 467 (474)
.|+.|+|++++||++++|.++|++++..++++||++...++++++|++|. ++.+|+++|++.+.|++..
T Consensus 374 kcl~ELVkh~eNGlvF~Ds~eLa~ql~~lf~~fp~~a~~l~~lkkn~~e~-~e~RW~~~W~~~~~P~~~~ 442 (444)
T KOG2941|consen 374 KCLDELVKHGENGLVFEDSEELAEQLQMLFKNFPDNADELNQLKKNLREE-QELRWDESWERTALPLVMD 442 (444)
T ss_pred hhHHHHHhcCCCceEeccHHHHHHHHHHHHhcCCCCHHHHHHHHHhhHHH-HhhhHHHHHHHhhhhhhhh
Confidence 99999999999999999999999999999999999999999999999996 5999999999999987654
|
|
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-48 Score=403.68 Aligned_cols=411 Identities=54% Similarity=0.928 Sum_probs=316.0
Q ss_pred CCCceEEEEEeCCCCCCchHHHHHHHHHhhCCCeEEEEecCCCCCCcceeccCCeEEEEeecCCCCCCCCCchhHHHHHH
Q 011969 2 GRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLL 81 (474)
Q Consensus 2 ~~~~~~~i~~~~~~g~~~r~~~~a~~l~~~~g~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~~ 81 (474)
.++||+|++...++|..+|+.+++.+|+++ ||+|+|+++.+..+..+.....||+++.++ ... ....+....+..+
T Consensus 1 ~~~~~~~~~~~~~~~~~~R~~~~a~~L~~~-G~~V~ii~~~~~~~~~~~~~~~~v~~~~~~--~~~-~~~~~~~~~~~~~ 76 (415)
T cd03816 1 PKRKRVCVLVLGDIGRSPRMQYHALSLAKH-GWKVDLVGYLETPPHDEILSNPNITIHPLP--PPP-QRLNKLPFLLFAP 76 (415)
T ss_pred CCccEEEEEEecccCCCHHHHHHHHHHHhc-CceEEEEEecCCCCCHHHhcCCCEEEEECC--CCc-cccccchHHHHHH
Confidence 378999999999999999999999999997 999999998865544343556799999988 221 1123334444444
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHH
Q 011969 82 LKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEK 161 (474)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~ 161 (474)
.+.+.+++.+++.++.+ .+||+||+++++.+++..++++++++.+.|+|+++|+.+++......+..+++.+++.++|+
T Consensus 77 ~~~~~~~~~~~~~l~~~-~~~Dvi~~~~~~~~~~~~~a~~~~~~~~~~~V~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~ 155 (415)
T cd03816 77 LKVLWQFFSLLWLLYKL-RPADYILIQNPPSIPTLLIAWLYCLLRRTKLIIDWHNYGYTILALKLGENHPLVRLAKWYEK 155 (415)
T ss_pred HHHHHHHHHHHHHHHhc-CCCCEEEEeCCCCchHHHHHHHHHHHhCCeEEEEcCCchHHHHhcccCCCCHHHHHHHHHHH
Confidence 55555555566655544 68999999998888877778888888899999999998655443333445556678889999
Q ss_pred HHhhhcCEEEEeCHHHHHHHHHHhC---CceEEEeCCCCCCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcC
Q 011969 162 YYGKMANGCLCVTQAMQHELAQNWG---IKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQK 238 (474)
Q Consensus 162 ~~~~~ad~vi~vS~~~~~~l~~~~~---~~~~vi~n~~~~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 238 (474)
.+++.||.++|+|+.+++++.+ ++ .++.++||++.+.|.|.+..........++.. .+
T Consensus 156 ~~~~~ad~ii~vS~~~~~~l~~-~~~~~~ki~vI~Ng~~~~f~p~~~~~~~~~~~~~~~~------------------~~ 216 (415)
T cd03816 156 LFGRLADYNLCVTKAMKEDLQQ-FNNWKIRATVLYDRPPEQFRPLPLEEKHELFLKLAKT------------------FL 216 (415)
T ss_pred HHhhcCCEeeecCHHHHHHHHh-hhccCCCeeecCCCCHHHceeCcHHHHHHHHHhcccc------------------cc
Confidence 9999999999999999999977 44 34899999977777776432221111110000 00
Q ss_pred cchhhhhcccccccccCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCE
Q 011969 239 ADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRL 318 (474)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (474)
. ...........++++.+++++|++.+.||++.|++|+..+.+.. ......|++
T Consensus 217 ~-----~~~~~~~~~~~~~~~~vi~~~grl~~~K~~~~li~A~~~l~~~~---------------------~~~~~~~~i 270 (415)
T cd03816 217 T-----RELRIGAVQLSEERPALLVSSTSWTPDEDFGILLDALVAYEKSA---------------------ATGPKLPKL 270 (415)
T ss_pred c-----cccccccceecCCCceEEEEeccccCCCCHHHHHHHHHHHHHhh---------------------cccccCCCE
Confidence 0 00000000122445568889999999999999999999986520 000124789
Q ss_pred EEEEEeCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEeccc
Q 011969 319 LFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS 398 (474)
Q Consensus 319 ~l~ivG~g~~~~~~~~~~~~l~l~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~ 398 (474)
+|+|+|+|+..+++++.+++++++++.|.++|++.++++.+|+.||++++|..++.++++|++++||||||+|||+++.+
T Consensus 271 ~l~ivG~G~~~~~l~~~~~~~~l~~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~ 350 (415)
T cd03816 271 LCIITGKGPLKEKYLERIKELKLKKVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFK 350 (415)
T ss_pred EEEEEecCccHHHHHHHHHHcCCCcEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCC
Confidence 99999999999999999999999888888766999999999999999998655556788999999999999999999999
Q ss_pred ccccccccCCcEEEeCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHHHHH
Q 011969 399 CIEELVKVDKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPL 464 (474)
Q Consensus 399 ~~~e~v~~~~~G~l~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 464 (474)
+..|+++++.+|++++|+++++++|..++++.+ +++.+++|++++++.. +.+|+..|++++-|+
T Consensus 351 ~~~eiv~~~~~G~lv~d~~~la~~i~~ll~~~~-~~~~~~~m~~~~~~~~-~~~~~~~~~~~~~~~ 414 (415)
T cd03816 351 CIDELVKHGENGLVFGDSEELAEQLIDLLSNFP-NRGKLNSLKKGAQEES-ELRWDENWDRVVGPL 414 (415)
T ss_pred CHHHHhcCCCCEEEECCHHHHHHHHHHHHhcCC-CHHHHHHHHHHHHHhh-hcCHHHHHHHHhhhh
Confidence 999999999999999999999999999998410 2789999999999977 999999999998776
|
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. |
| >PLN02275 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-46 Score=383.93 Aligned_cols=371 Identities=79% Similarity=1.259 Sum_probs=292.7
Q ss_pred CCCCceEEEEEeCCCCCCchHHHHHHHHHhhCCCeEEEEecCCCCCCcceeccCCeEEEEeecCCCCCCCCCchhHHHHH
Q 011969 1 MGRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLL 80 (474)
Q Consensus 1 m~~~~~~~i~~~~~~g~~~r~~~~a~~l~~~~g~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~ 80 (474)
|+++.++.|++++++|.++||..++..++++.+++|+|+++.+.....+.....|+++++++. +......++....+..
T Consensus 1 ~~~~~~~~~~~~~~~g~~~r~~~~~~~l~~~~~~~v~vi~~~~~~~~~~~~~~~~v~v~r~~~-~~~~~~~~~~~~~~~~ 79 (371)
T PLN02275 1 MGRRGRAAVVVLGDFGRSPRMQYHALSLARQASFQVDVVAYGGSEPIPALLNHPSIHIHLMVQ-PRLLQRLPRVLYALAL 79 (371)
T ss_pred CCCccEEEEEEecCCCCCHHHHHHHHHHHhcCCceEEEEEecCCCCCHHHhcCCcEEEEECCC-cccccccccchHHHHH
Confidence 899999999999999999999999999999734589999998766655666777899999984 2222234444444445
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCchHHHHHHHHH
Q 011969 81 LLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIE 160 (474)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e 160 (474)
+....+.+..++|.+..+..+||+||+++|+.+....++++++++.+.|+|+++|+.++............+.+++.+++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~e 159 (371)
T PLN02275 80 LLKVAIQFLMLLWFLCVKIPRPDVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGYTLLALSLGRSHPLVRLYRWYE 159 (371)
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccHHHHhcccCCCCHHHHHHHHHH
Confidence 55555666667777655568999999999887776667888888889999999999864333222333455567888999
Q ss_pred HHHhhhcCEEEEeCHHHHHHHHHHhCCceEEEeCCCCCCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcc
Q 011969 161 KYYGKMANGCLCVTQAMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKAD 240 (474)
Q Consensus 161 ~~~~~~ad~vi~vS~~~~~~l~~~~~~~~~vi~n~~~~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (474)
+.+++.||.++++|+.+++.+.+.++.++.+++|++.+.|.|.....
T Consensus 160 ~~~~~~ad~ii~~S~~~~~~l~~~~g~~i~vi~n~~~~~f~~~~~~~--------------------------------- 206 (371)
T PLN02275 160 RHYGKMADGHLCVTKAMQHELDQNWGIRATVLYDQPPEFFRPASLEI--------------------------------- 206 (371)
T ss_pred HHHHhhCCEEEECCHHHHHHHHHhcCCCeEEECCCCHHHcCcCCchh---------------------------------
Confidence 99999999999999999999988777778899998666665542110
Q ss_pred hhhhhcccccccccCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEE
Q 011969 241 ETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLF 320 (474)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 320 (474)
....+.+.+++++|++.+.||++.+++|+..+..++....+.++ +.+......|+++|
T Consensus 207 ------------~~~~~~~~~i~~~grl~~~k~~~~li~a~~~l~~~~~~~~~~~~----------~~~~~~~~~~~i~l 264 (371)
T PLN02275 207 ------------RLRPNRPALVVSSTSWTPDEDFGILLEAAVMYDRRVAARLNESD----------SASGKQSLYPRLLF 264 (371)
T ss_pred ------------cccCCCcEEEEEeCceeccCCHHHHHHHHHHHHhhhhhcccccc----------ccccccccCCCeEE
Confidence 01123344788999999999999999999988654333222111 11111123578999
Q ss_pred EEEeCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEeccccc
Q 011969 321 IITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI 400 (474)
Q Consensus 321 ~ivG~g~~~~~~~~~~~~l~l~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~~~ 400 (474)
+|+|+|++++++++.++++++++|.|.++|++.++++.+|+.||++|+|..++.+|++|++++||||||+|||+++.++.
T Consensus 265 ~ivG~G~~~~~l~~~~~~~~l~~v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~gg~ 344 (371)
T PLN02275 265 IITGKGPQKAMYEEKISRLNLRHVAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI 344 (371)
T ss_pred EEEeCCCCHHHHHHHHHHcCCCceEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHCCCCEEEecCCCh
Confidence 99999999999999999999988999887799999999999999999865445678999999999999999999999999
Q ss_pred ccccccCCcEEEeCCHHHHHHHHHHHH
Q 011969 401 EELVKVDKNGLLFSSSSELADQLLMLF 427 (474)
Q Consensus 401 ~e~v~~~~~G~l~~~~~~la~~i~~l~ 427 (474)
+|+|+++.+|++++++++|+++|.+++
T Consensus 345 ~eiv~~g~~G~lv~~~~~la~~i~~l~ 371 (371)
T PLN02275 345 GELVKDGKNGLLFSSSSELADQLLELL 371 (371)
T ss_pred HHHccCCCCeEEECCHHHHHHHHHHhC
Confidence 999999999999999999999998864
|
|
| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=317.73 Aligned_cols=378 Identities=17% Similarity=0.198 Sum_probs=265.9
Q ss_pred eEEEEEe---CCCCCC-chHHHHHHHHHhhCCCeEEEEecCCCCCC-----------cceeccCCeEEEEeecCCCCCCC
Q 011969 6 RACVVVL---GDLGRS-PRMQYQALSLARQMSLEVDVVAYGGSKPH-----------AAILEHPSIHIHTMTQWPTIPRG 70 (474)
Q Consensus 6 ~~~i~~~---~~~g~~-~r~~~~a~~l~~~~g~eV~Vv~~~~~~~~-----------~~~~~~~gi~i~~~~~~~~~~~~ 70 (474)
+++++.. .++||. .++...+..|.++ ||+|+|+|.....+. ......+|+++++++.+.. ..
T Consensus 2 kIlii~~~~~P~~~g~~~~~~~l~~~L~~~-G~~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~r~~~~~~--~~ 78 (412)
T PRK10307 2 KILVYGINYAPELTGIGKYTGEMAEWLAAR-GHEVRVITAPPYYPQWRVGEGYSAWRYRRESEGGVTVWRCPLYVP--KQ 78 (412)
T ss_pred eEEEEecCCCCCccchhhhHHHHHHHHHHC-CCeEEEEecCCCCCCCCCCcccccccceeeecCCeEEEEccccCC--CC
Confidence 3555543 444543 4566778899996 999999996532111 0122356999999984321 11
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHhhhcCCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhh-hhccCCC
Q 011969 71 LPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLL-SLSLGRR 149 (474)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~-~~~~~~~ 149 (474)
...+.+.+.... +.......+ ......+||+||+++|+... ..++.+++++.+.|+++++||++.... .....+.
T Consensus 79 ~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~Div~~~~p~~~~-~~~~~~~~~~~~~~~v~~~~d~~~~~~~~~~~~~~ 154 (412)
T PRK10307 79 PSGLKRLLHLGS-FALSSFFPL--LAQRRWRPDRVIGVVPTLFC-APGARLLARLSGARTWLHIQDYEVDAAFGLGLLKG 154 (412)
T ss_pred ccHHHHHHHHHH-HHHHHHHHH--hhccCCCCCEEEEeCCcHHH-HHHHHHHHHhhCCCEEEEeccCCHHHHHHhCCccC
Confidence 111111111111 111100011 11112689999999865443 335667788888999999999753221 1111133
Q ss_pred chHHHHHHHHHHHHhhhcCEEEEeCHHHHHHHHHHhCC---ceEEEeCCCC-CCCCCCChHHHHHHHHhhhhccCCCCCc
Q 011969 150 SHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQNWGI---KATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGV 225 (474)
Q Consensus 150 ~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~~l~~~~~~---~~~vi~n~~~-~~f~~~~~~~~~~~~~~l~~~~~~~~~~ 225 (474)
+.+.++..++++.+++.||.++++|+.+++.+.+. +. ++.+++|+.+ +.|.+........++++++
T Consensus 155 ~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~~~-~~~~~~i~vi~ngvd~~~~~~~~~~~~~~~~~~~~--------- 224 (412)
T PRK10307 155 GKVARLATAFERSLLRRFDNVSTISRSMMNKAREK-GVAAEKVIFFPNWSEVARFQPVADADVDALRAQLG--------- 224 (412)
T ss_pred cHHHHHHHHHHHHHHhhCCEEEecCHHHHHHHHHc-CCCcccEEEECCCcCHhhcCCCCccchHHHHHHcC---------
Confidence 44556677889999999999999999999998764 43 3889999954 5565543222233444544
Q ss_pred cccccccccCCcCcchhhhhcccccccccCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHh
Q 011969 226 QDCVSNAGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLK 305 (474)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~ 305 (474)
+ ++.+.+++|+|++.+.||++.|++|++.+.+
T Consensus 225 ----------------------------~-~~~~~~i~~~G~l~~~kg~~~li~a~~~l~~------------------- 256 (412)
T PRK10307 225 ----------------------------L-PDGKKIVLYSGNIGEKQGLELVIDAARRLRD------------------- 256 (412)
T ss_pred ----------------------------C-CCCCEEEEEcCccccccCHHHHHHHHHHhcc-------------------
Confidence 2 2233489999999999999999999988744
Q ss_pred hhcCCccccCCCEEEEEEeCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcccEEEeeccCC-CCCCCchHHHH
Q 011969 306 EISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSS-SGLDLPMKVVD 384 (474)
Q Consensus 306 ~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~~~l~l~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s-~~e~~p~kv~E 384 (474)
.++++|+|+|+|+..+++++.++++++++|.|+|. ++.+++..+|+.||++++|.... .+..+|++++|
T Consensus 257 ---------~~~~~l~ivG~g~~~~~l~~~~~~~~l~~v~f~G~-~~~~~~~~~~~~aDi~v~ps~~e~~~~~~p~kl~e 326 (412)
T PRK10307 257 ---------RPDLIFVICGQGGGKARLEKMAQCRGLPNVHFLPL-QPYDRLPALLKMADCHLLPQKAGAADLVLPSKLTN 326 (412)
T ss_pred ---------CCCeEEEEECCChhHHHHHHHHHHcCCCceEEeCC-CCHHHHHHHHHhcCEeEEeeccCcccccCcHHHHH
Confidence 47899999999999999999999999988999997 99999999999999999953221 11227999999
Q ss_pred HHhcCCcEEEecccc--cccccccCCcEEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc-cccchHHHHHH
Q 011969 385 MFGCGLPVCAVSYSC--IEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARWATEWEE 459 (474)
Q Consensus 385 ama~G~PVia~~~~~--~~e~v~~~~~G~l~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~~~ 459 (474)
|||||+|||+++.++ +.+++. ++|++++ |+++++++|.+++++ ++.+++|++++++.. +.++|+...++
T Consensus 327 ama~G~PVi~s~~~g~~~~~~i~--~~G~~~~~~d~~~la~~i~~l~~~----~~~~~~~~~~a~~~~~~~fs~~~~~~~ 400 (412)
T PRK10307 327 MLASGRNVVATAEPGTELGQLVE--GIGVCVEPESVEALVAAIAALARQ----ALLRPKLGTVAREYAERTLDKENVLRQ 400 (412)
T ss_pred HHHcCCCEEEEeCCCchHHHHHh--CCcEEeCCCCHHHHHHHHHHHHhC----HHHHHHHHHHHHHHHHHHcCHHHHHHH
Confidence 999999999998765 457776 6899985 799999999999984 889999999999876 46899887766
Q ss_pred HHHHH
Q 011969 460 HAKPL 464 (474)
Q Consensus 460 ~~~~~ 464 (474)
..+.+
T Consensus 401 ~~~~~ 405 (412)
T PRK10307 401 FIADI 405 (412)
T ss_pred HHHHH
Confidence 54433
|
|
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-35 Score=306.88 Aligned_cols=367 Identities=17% Similarity=0.167 Sum_probs=262.1
Q ss_pred CCCCCch-HHHHHHHHHhhCCCeEEEEecCCCCCC-cceeccCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHHHH
Q 011969 14 DLGRSPR-MQYQALSLARQMSLEVDVVAYGGSKPH-AAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFML 91 (474)
Q Consensus 14 ~~g~~~r-~~~~a~~l~~~~g~eV~Vv~~~~~~~~-~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (474)
+.||..+ +...+..|.++ ||+|+|+|....... ......+|+++++++..+.......+++..+. .+... +
T Consensus 18 ~~GG~e~~v~~la~~L~~~-G~~V~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~---~ 90 (405)
T TIGR03449 18 DAGGMNVYILETATELARR-GIEVDIFTRATRPSQPPVVEVAPGVRVRNVVAGPYEGLDKEDLPTQLC---AFTGG---V 90 (405)
T ss_pred CCCCceehHHHHHHHHhhC-CCEEEEEecccCCCCCCccccCCCcEEEEecCCCcccCCHHHHHHHHH---HHHHH---H
Confidence 3566544 55667888886 999999997643211 12223469999988722211111111111111 11111 1
Q ss_pred HHHHhhh-cCCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccC-CCchHHHHHHHHHHHHhhhcCE
Q 011969 92 LWFLCVK-IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLG-RRSHFVSIYRWIEKYYGKMANG 169 (474)
Q Consensus 92 ~~~~~~~-~~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~-~~~~~~~~~~~~e~~~~~~ad~ 169 (474)
+...+.+ ..+||+||+|. .....+++++++..++|+|+++|+.+.... .... ...+.....+++++.+.+.+|.
T Consensus 91 ~~~~~~~~~~~~Diih~h~---~~~~~~~~~~~~~~~~p~v~t~h~~~~~~~-~~~~~~~~~~~~~~~~~e~~~~~~~d~ 166 (405)
T TIGR03449 91 LRAEARHEPGYYDLIHSHY---WLSGQVGWLLRDRWGVPLVHTAHTLAAVKN-AALADGDTPEPEARRIGEQQLVDNADR 166 (405)
T ss_pred HHHHhhccCCCCCeEEech---HHHHHHHHHHHHhcCCCEEEeccchHHHHH-HhccCCCCCchHHHHHHHHHHHHhcCe
Confidence 1122221 24799999998 333445677777889999999998742111 0111 1112223445678888899999
Q ss_pred EEEeCHHHHHHHHHHhCC---ceEEEeCCCC-CCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhh
Q 011969 170 CLCVTQAMQHELAQNWGI---KATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFT 245 (474)
Q Consensus 170 vi~vS~~~~~~l~~~~~~---~~~vi~n~~~-~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (474)
++++|+..++.+.+.++. ++.+++||.+ +.|.+.. +...+.+++
T Consensus 167 vi~~s~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~---~~~~~~~~~----------------------------- 214 (405)
T TIGR03449 167 LIANTDEEARDLVRHYDADPDRIDVVAPGADLERFRPGD---RATERARLG----------------------------- 214 (405)
T ss_pred EEECCHHHHHHHHHHcCCChhhEEEECCCcCHHHcCCCc---HHHHHHhcC-----------------------------
Confidence 999999988888776664 3789999954 5565442 222333443
Q ss_pred cccccccccCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCC--EEEEEE
Q 011969 246 SLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPR--LLFIIT 323 (474)
Q Consensus 246 ~~~~~~~~~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~iv 323 (474)
++++. .+++|+|++.+.||++.+++|+..+.++ .|+ ++|+|+
T Consensus 215 --------~~~~~-~~i~~~G~l~~~K~~~~li~a~~~l~~~---------------------------~~~~~~~l~iv 258 (405)
T TIGR03449 215 --------LPLDT-KVVAFVGRIQPLKAPDVLLRAVAELLDR---------------------------DPDRNLRVIVV 258 (405)
T ss_pred --------CCCCC-cEEEEecCCCcccCHHHHHHHHHHHHhh---------------------------CCCcceEEEEE
Confidence 22333 3899999999999999999999988663 455 999999
Q ss_pred eC----C-CChHHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecc
Q 011969 324 GK----G-PDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY 397 (474)
Q Consensus 324 G~----g-~~~~~~~~~~~~l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~ 397 (474)
|+ | +..+++++.++++++ ++|.|+|. ++.+++..+|+.||++++ ||..|++|++++|||+||+|||+++.
T Consensus 259 G~~~~~g~~~~~~l~~~~~~~~l~~~v~~~g~-~~~~~~~~~l~~ad~~v~---ps~~E~~g~~~lEAma~G~Pvi~~~~ 334 (405)
T TIGR03449 259 GGPSGSGLATPDALIELAAELGIADRVRFLPP-RPPEELVHVYRAADVVAV---PSYNESFGLVAMEAQACGTPVVAARV 334 (405)
T ss_pred eCCCCCcchHHHHHHHHHHHcCCCceEEECCC-CCHHHHHHHHHhCCEEEE---CCCCCCcChHHHHHHHcCCCEEEecC
Confidence 96 3 455778899999998 68999998 999999999999999999 57789999999999999999999999
Q ss_pred cccccccccCCcEEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHH
Q 011969 398 SCIEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEV 468 (474)
Q Consensus 398 ~~~~e~v~~~~~G~l~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 468 (474)
++..|++.++.+|++++ |+++++++|.+++++ ++.+++|++++++..++++|+..-+++. .+++++
T Consensus 335 ~~~~e~i~~~~~g~~~~~~d~~~la~~i~~~l~~----~~~~~~~~~~~~~~~~~fsw~~~~~~~~-~~y~~~ 402 (405)
T TIGR03449 335 GGLPVAVADGETGLLVDGHDPADWADALARLLDD----PRTRIRMGAAAVEHAAGFSWAATADGLL-SSYRDA 402 (405)
T ss_pred CCcHhhhccCCceEECCCCCHHHHHHHHHHHHhC----HHHHHHHHHHHHHHHHhCCHHHHHHHHH-HHHHHH
Confidence 99999999999999996 799999999999984 8889999999998877899987766544 344443
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. |
| >PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-36 Score=317.42 Aligned_cols=353 Identities=19% Similarity=0.239 Sum_probs=254.4
Q ss_pred CchHHHHHHHHHhhCCCeEEEEecCCCCCCcceeccCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhh
Q 011969 18 SPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCV 97 (474)
Q Consensus 18 ~~r~~~~a~~l~~~~g~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (474)
..|+...+..|.++ ||+|+|++.....+. ...+++++....++.+. .......+....+ ++..+
T Consensus 77 ~~~~~~l~~~L~~~-G~eV~vlt~~~~~~~----~~~g~~v~~~~~~~~~~--~~~~~~~~~~~~~--------l~~~i- 140 (465)
T PLN02871 77 KNRFQNFIRYLREM-GDEVLVVTTDEGVPQ----EFHGAKVIGSWSFPCPF--YQKVPLSLALSPR--------IISEV- 140 (465)
T ss_pred HHHHHHHHHHHHHC-CCeEEEEecCCCCCc----cccCceeeccCCcCCcc--CCCceeeccCCHH--------HHHHH-
Confidence 45677777888886 999999997654321 22366665544221111 1111100000000 11112
Q ss_pred hcCCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhhhcCEEEEeCHHH
Q 011969 98 KIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAM 177 (474)
Q Consensus 98 ~~~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~ 177 (474)
+..+||+||+|++... ...+.++++..++|+|++.|+....... .. ....+.+....+++.+.+.+|.++++|+.+
T Consensus 141 ~~~kpDiIh~~~~~~~--~~~~~~~ak~~~ip~V~~~h~~~~~~~~-~~-~~~~~~~~~~~~~r~~~~~ad~ii~~S~~~ 216 (465)
T PLN02871 141 ARFKPDLIHASSPGIM--VFGALFYAKLLCVPLVMSYHTHVPVYIP-RY-TFSWLVKPMWDIIRFLHRAADLTLVTSPAL 216 (465)
T ss_pred HhCCCCEEEECCCchh--HHHHHHHHHHhCCCEEEEEecCchhhhh-cc-cchhhHHHHHHHHHHHHhhCCEEEECCHHH
Confidence 2278999999986432 2234455667789999999976322111 01 112222223456788889999999999999
Q ss_pred HHHHHHHh---CCceEEEeCCCC-CCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhcccccccc
Q 011969 178 QHELAQNW---GIKATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVF 253 (474)
Q Consensus 178 ~~~l~~~~---~~~~~vi~n~~~-~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (474)
++.+.+.. ..++.+++||.+ +.|.|... ....+.++. .
T Consensus 217 ~~~l~~~~~~~~~kv~vi~nGvd~~~f~p~~~--~~~~~~~~~------------------------------------~ 258 (465)
T PLN02871 217 GKELEAAGVTAANRIRVWNKGVDSESFHPRFR--SEEMRARLS------------------------------------G 258 (465)
T ss_pred HHHHHHcCCCCcCeEEEeCCccCccccCCccc--cHHHHHHhc------------------------------------C
Confidence 99998764 234889999954 66766432 122233322 0
Q ss_pred cCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCChHHHH
Q 011969 254 LKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYE 333 (474)
Q Consensus 254 ~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~~~ 333 (474)
..++++ +++|+|++.+.||++.++++++.+ ++++|+|+|+|+..++++
T Consensus 259 ~~~~~~-~i~~vGrl~~~K~~~~li~a~~~~-------------------------------~~~~l~ivG~G~~~~~l~ 306 (465)
T PLN02871 259 GEPEKP-LIVYVGRLGAEKNLDFLKRVMERL-------------------------------PGARLAFVGDGPYREELE 306 (465)
T ss_pred CCCCCe-EEEEeCCCchhhhHHHHHHHHHhC-------------------------------CCcEEEEEeCChHHHHHH
Confidence 112333 789999999999999999988763 679999999999888887
Q ss_pred HHHHHcCCCcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEeccccccccccc---CCcE
Q 011969 334 EKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKV---DKNG 410 (474)
Q Consensus 334 ~~~~~l~l~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~~~~e~v~~---~~~G 410 (474)
+.++. .+|.|+|. ++.+++..+|+.||++|+ +|..|++|++++||||||+|||+++.+++.|++.+ +.+|
T Consensus 307 ~~~~~---~~V~f~G~-v~~~ev~~~~~~aDv~V~---pS~~E~~g~~vlEAmA~G~PVI~s~~gg~~eiv~~~~~~~~G 379 (465)
T PLN02871 307 KMFAG---TPTVFTGM-LQGDELSQAYASGDVFVM---PSESETLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEGKTG 379 (465)
T ss_pred HHhcc---CCeEEecc-CCHHHHHHHHHHCCEEEE---CCcccccCcHHHHHHHcCCCEEEcCCCCcHhhhhcCCCCCce
Confidence 77664 37999998 999999999999999999 67789999999999999999999999999999998 9999
Q ss_pred EEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHhhc
Q 011969 411 LLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEVISQ 471 (474)
Q Consensus 411 ~l~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~ 471 (474)
++++ |+++++++|..++++ ++.+++|++++++...+++|+...+++.+.++.+++..
T Consensus 380 ~lv~~~d~~~la~~i~~ll~~----~~~~~~~~~~a~~~~~~fsw~~~a~~l~~~~Y~~~~~~ 438 (465)
T PLN02871 380 FLYTPGDVDDCVEKLETLLAD----PELRERMGAAAREEVEKWDWRAATRKLRNEQYSAAIWF 438 (465)
T ss_pred EEeCCCCHHHHHHHHHHHHhC----HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 9996 799999999999984 88999999999998888999998888777666766554
|
|
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-35 Score=300.84 Aligned_cols=357 Identities=18% Similarity=0.192 Sum_probs=256.9
Q ss_pred CCceEEEEEeCCCCCCchHHHH-HHHHHhhCCCeEEEEecCCCCCCcceeccCCeEEEEeecCCCCCCCCCchhHHHHHH
Q 011969 3 RRGRACVVVLGDLGRSPRMQYQ-ALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLL 81 (474)
Q Consensus 3 ~~~~~~i~~~~~~g~~~r~~~~-a~~l~~~~g~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~~ 81 (474)
++++++|+...+.||..++... +..|.++ |+++.|++..............|+++++++. . .. .....+..+
T Consensus 1 ~~~il~ii~~~~~GG~e~~~~~l~~~l~~~-~~~~~v~~~~~~~~~~~~~~~~~i~~~~~~~--~---~~-~~~~~~~~l 73 (374)
T TIGR03088 1 RPLIVHVVYRFDVGGLENGLVNLINHLPAD-RYRHAVVALTEVSAFRKRIQRPDVAFYALHK--Q---PG-KDVAVYPQL 73 (374)
T ss_pred CceEEEEeCCCCCCcHHHHHHHHHhhcccc-ccceEEEEcCCCChhHHHHHhcCceEEEeCC--C---CC-CChHHHHHH
Confidence 3567778888888998887755 4556665 9999999865433333334456899988872 1 11 111222222
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCEEEEeCCCChhHHHHHHHHHhhCCCcE-EEEecCchhhhhhhccCCCchHHHHHHHHH
Q 011969 82 LKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAF-IVDWHNFGYTLLSLSLGRRSHFVSIYRWIE 160 (474)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e 160 (474)
.+.+ +..+||+||+|++... .+.+++++.+.|. +++.|+... .........+.+++
T Consensus 74 ~~~l------------~~~~~Divh~~~~~~~----~~~~~~~~~~~~~~i~~~h~~~~-------~~~~~~~~~~~~~~ 130 (374)
T TIGR03088 74 YRLL------------RQLRPDIVHTRNLAAL----EAQLPAALAGVPARIHGEHGRDV-------FDLDGSNWKYRWLR 130 (374)
T ss_pred HHHH------------HHhCCCEEEEcchhHH----HHHHHHHhcCCCeEEEeecCccc-------ccchhhHHHHHHHH
Confidence 2222 2278999999984322 2334455556664 445564311 01111112345677
Q ss_pred HHHhhhcCEEEEeCHHHHHHHHHHhCCc---eEEEeCCCC-CCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCC
Q 011969 161 KYYGKMANGCLCVTQAMQHELAQNWGIK---ATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEG 236 (474)
Q Consensus 161 ~~~~~~ad~vi~vS~~~~~~l~~~~~~~---~~vi~n~~~-~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 236 (474)
+.+.+.+|.++++|+.+++++.+.++.+ +.+++|+.+ +.|.+..... ...+...
T Consensus 131 ~~~~~~~~~~i~vs~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~-~~~~~~~--------------------- 188 (374)
T TIGR03088 131 RLYRPLIHHYVAVSRDLEDWLRGPVKVPPAKIHQIYNGVDTERFHPSRGDR-SPILPPD--------------------- 188 (374)
T ss_pred HHHHhcCCeEEEeCHHHHHHHHHhcCCChhhEEEeccCccccccCCCccch-hhhhHhh---------------------
Confidence 7777889999999999999998876643 789999954 5565542111 1111111
Q ss_pred cCcchhhhhcccccccccCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCC
Q 011969 237 QKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYP 316 (474)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (474)
..++.+.+++|+|++.+.||++.+++|+..+.++. +...+
T Consensus 189 -----------------~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~-----------------------~~~~~ 228 (374)
T TIGR03088 189 -----------------FFADESVVVGTVGRLQAVKDQPTLVRAFALLVRQL-----------------------PEGAE 228 (374)
T ss_pred -----------------cCCCCCeEEEEEecCCcccCHHHHHHHHHHHHHhC-----------------------ccccc
Confidence 11233458999999999999999999999886630 00124
Q ss_pred CEEEEEEeCCCChHHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEe
Q 011969 317 RLLFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV 395 (474)
Q Consensus 317 ~~~l~ivG~g~~~~~~~~~~~~l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~ 395 (474)
+++|+++|+|+..+++++.++++++ ++|.|.|. .+|+..+|+.||++++ ||..|++|++++|||+||+|||++
T Consensus 229 ~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~---~~~~~~~~~~adi~v~---pS~~Eg~~~~~lEAma~G~Pvv~s 302 (374)
T TIGR03088 229 RLRLVIVGDGPARGACEQMVRAAGLAHLVWLPGE---RDDVPALMQALDLFVL---PSLAEGISNTILEAMASGLPVIAT 302 (374)
T ss_pred ceEEEEecCCchHHHHHHHHHHcCCcceEEEcCC---cCCHHHHHHhcCEEEe---ccccccCchHHHHHHHcCCCEEEc
Confidence 7999999999998999999999998 57888886 7899999999999999 688899999999999999999999
Q ss_pred cccccccccccCCcEEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc-cccchHHHHHHHH
Q 011969 396 SYSCIEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARWATEWEEHA 461 (474)
Q Consensus 396 ~~~~~~e~v~~~~~G~l~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~~~~~ 461 (474)
+.++..|++.++.+|++++ |+++++++|..++++ ++.++++++++++.. ..++|+...+++.
T Consensus 303 ~~~g~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~----~~~~~~~~~~a~~~~~~~fs~~~~~~~~~ 367 (374)
T TIGR03088 303 AVGGNPELVQHGVTGALVPPGDAVALARALQPYVSD----PAARRAHGAAGRARAEQQFSINAMVAAYA 367 (374)
T ss_pred CCCCcHHHhcCCCceEEeCCCCHHHHHHHHHHHHhC----HHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 9999999999999999995 799999999999884 888899999998875 5788988765543
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=301.71 Aligned_cols=352 Identities=13% Similarity=0.075 Sum_probs=247.0
Q ss_pred CCCCCCch-HHHHHHHHHhhCCCeEEEEecCCCCCCcceeccCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHHHH
Q 011969 13 GDLGRSPR-MQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFML 91 (474)
Q Consensus 13 ~~~g~~~r-~~~~a~~l~~~~g~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (474)
...||..| +...+..|+++ ||+|+|++..............|+++++++.... .....+...+... ..+.
T Consensus 11 p~~GG~e~~~~~la~~L~~~-G~~V~v~~~~~~~~~~~~~~~~~i~v~~~p~~~~--~~~~~~~~~~~~~-~~l~----- 81 (398)
T cd03796 11 PNLGGVETHIYQLSQCLIKR-GHKVVVITHAYGNRVGIRYLTNGLKVYYLPFVVF--YNQSTLPTFFGTF-PLLR----- 81 (398)
T ss_pred cccccHHHHHHHHHHHHHHc-CCeeEEEeccCCcCCCcccccCceeEEEecceec--cCCccccchhhhH-HHHH-----
Confidence 34566555 55667888886 9999999965332221223345899988873221 1111111111111 1111
Q ss_pred HHHHhhhcCCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhhhcCEEE
Q 011969 92 LWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCL 171 (474)
Q Consensus 92 ~~~~~~~~~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi 171 (474)
..+ +..+||+||+|++..... ..+.++++..++|+|++.|+... ..........++.+...+.+|.++
T Consensus 82 --~~~-~~~~~DiIh~~~~~~~~~-~~~~~~~~~~~~~~v~t~h~~~~--------~~~~~~~~~~~~~~~~~~~~d~ii 149 (398)
T cd03796 82 --NIL-IRERITIVHGHQAFSALA-HEALLHARTMGLKTVFTDHSLFG--------FADASSIHTNKLLRFSLADVDHVI 149 (398)
T ss_pred --HHH-HhcCCCEEEECCCCchHH-HHHHHHhhhcCCcEEEEeccccc--------ccchhhHHhhHHHHHhhccCCEEE
Confidence 111 227899999998644322 23555667788999999998621 111111223456677788999999
Q ss_pred EeCHHHHHHHHHHhCC---ceEEEeCCCC-CCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhcc
Q 011969 172 CVTQAMQHELAQNWGI---KATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSL 247 (474)
Q Consensus 172 ~vS~~~~~~l~~~~~~---~~~vi~n~~~-~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (474)
++|+..++.+....+. ++.++|||.+ +.|.+....
T Consensus 150 ~~s~~~~~~~~~~~~~~~~k~~vi~ngvd~~~f~~~~~~----------------------------------------- 188 (398)
T cd03796 150 CVSHTSKENTVLRASLDPERVSVIPNAVDSSDFTPDPSK----------------------------------------- 188 (398)
T ss_pred EecHhHhhHHHHHhCCChhhEEEEcCccCHHHcCCCccc-----------------------------------------
Confidence 9999998765443333 3789999854 445443210
Q ss_pred cccccccCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCC
Q 011969 248 AGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP 327 (474)
Q Consensus 248 ~~~~~~~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~ 327 (474)
..+...+++|+|++.+.||++.|++|++.+.+. .|+++|+|+|+|+
T Consensus 189 -------~~~~~~~i~~~grl~~~Kg~~~li~a~~~l~~~---------------------------~~~~~l~i~G~g~ 234 (398)
T cd03796 189 -------RDNDKITIVVISRLVYRKGIDLLVGIIPEICKK---------------------------HPNVRFIIGGDGP 234 (398)
T ss_pred -------CCCCceEEEEEeccchhcCHHHHHHHHHHHHhh---------------------------CCCEEEEEEeCCc
Confidence 012334899999999999999999999988763 6899999999999
Q ss_pred ChHHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEeccccccccccc
Q 011969 328 DKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKV 406 (474)
Q Consensus 328 ~~~~~~~~~~~l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~~~~e~v~~ 406 (474)
..+.+++.++++++ ++|.|.|. ++.+++..+|+.||++++ +|..|++|++++||||||+|||+++.++..|++.+
T Consensus 235 ~~~~l~~~~~~~~l~~~v~~~G~-~~~~~~~~~l~~ad~~v~---pS~~E~~g~~~~EAma~G~PVI~s~~gg~~e~i~~ 310 (398)
T cd03796 235 KRILLEEMREKYNLQDRVELLGA-VPHERVRDVLVQGHIFLN---TSLTEAFCIAIVEAASCGLLVVSTRVGGIPEVLPP 310 (398)
T ss_pred hHHHHHHHHHHhCCCCeEEEeCC-CCHHHHHHHHHhCCEEEe---CChhhccCHHHHHHHHcCCCEEECCCCCchhheeC
Confidence 99999999999999 68999998 999999999999999999 67789999999999999999999999999999977
Q ss_pred CCcEEEeCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH-hccccchHHHHHHHHHHHHHHHh
Q 011969 407 DKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLE-MGLSARWATEWEEHAKPLITEVI 469 (474)
Q Consensus 407 ~~~G~l~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~w~~~~~~~~~~~~~~~~ 469 (474)
+..++..+|+++++++|.+++++ ......+++++.+ ..++++|+...+++.+ ++++++
T Consensus 311 ~~~~~~~~~~~~l~~~l~~~l~~----~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~-~y~~l~ 369 (398)
T cd03796 311 DMILLAEPDVESIVRKLEEAISI----LRTGKHDPWSFHNRVKKMYSWEDVAKRTEK-VYDRIL 369 (398)
T ss_pred CceeecCCCHHHHHHHHHHHHhC----hhhhhhHHHHHHHHHHhhCCHHHHHHHHHH-HHHHHh
Confidence 65444445899999999999985 3333345555544 3457999888777553 334433
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. |
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=298.29 Aligned_cols=364 Identities=18% Similarity=0.228 Sum_probs=251.9
Q ss_pred ceEEEEEeCCCCCCchH-HHHHHHHHhhCCCeEEEEecCCCCCCc-ceeccCCeEEEEeecCCCCCCCCCchhHHHHHHH
Q 011969 5 GRACVVVLGDLGRSPRM-QYQALSLARQMSLEVDVVAYGGSKPHA-AILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLL 82 (474)
Q Consensus 5 ~~~~i~~~~~~g~~~r~-~~~a~~l~~~~g~eV~Vv~~~~~~~~~-~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~ 82 (474)
|++++...-..||+.|+ ...|.+|+++ ||+|+|+|........ ......++.++....+. +.. ....+..+.
T Consensus 2 kIl~~~~~~~~gG~e~~~~~la~~L~~~-G~~V~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~---~~~~~~~~~ 75 (392)
T cd03805 2 RVAFIHPDLGIGGAERLVVDAALALQSR-GHEVTIYTSHHDPSHCFEETKDGTLPVRVRGDWL--PRS---IFGRFHILC 75 (392)
T ss_pred eEEEECCCCCCchHHHHHHHHHHHHHhC-CCeEEEEcCCCCchhcchhccCCeeEEEEEeEEE--cch---hhHhHHHHH
Confidence 44555444456887776 5678889886 9999999965332111 11122236665554211 111 111111111
Q ss_pred HHHHHHHHHHHHHhhhcCCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCchH----HHHHHH
Q 011969 83 KPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHF----VSIYRW 158 (474)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~----~~~~~~ 158 (474)
..+.......+....+..++|+||+++.. .. ..++....+.|+++++|.... .. ..+.+.. .....+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~Dvi~~~~~~---~~--~~~~~~~~~~~~i~~~h~~~~-~~---~~~~~~~~~~~~~~~~~ 146 (392)
T cd03805 76 AYLRMLYLALYLLLLPDEKYDVFIVDQVS---AC--VPLLKLFSPSKILFYCHFPDQ-LL---AQRGSLLKRLYRKPFDW 146 (392)
T ss_pred HHHHHHHHHHHHHhcccCCCCEEEEcCcc---hH--HHHHHHhcCCcEEEEEecChH-Hh---cCCCcHHHHHHHHHHHH
Confidence 11221111111112344799999998732 22 122233444889999995421 11 1122222 234567
Q ss_pred HHHHHhhhcCEEEEeCHHHHHHHHHHhCC---c-eEEEeCCCC-CCCCCCChHHHHHHHHhhhhccCCCCCccccccccc
Q 011969 159 IEKYYGKMANGCLCVTQAMQHELAQNWGI---K-ATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAG 233 (474)
Q Consensus 159 ~e~~~~~~ad~vi~vS~~~~~~l~~~~~~---~-~~vi~n~~~-~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 233 (474)
+|+..++.||.++++|+.+++.+.+.++. + ..+++|+.+ +.|.+..... ....
T Consensus 147 ~e~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~~~~vi~n~vd~~~~~~~~~~~---~~~~------------------- 204 (392)
T cd03805 147 LEEFTTGMADKIVVNSNFTASVFKKTFPSLAKNPREVVYPCVDTDSFESTSEDP---DPGL------------------- 204 (392)
T ss_pred HHHHHhhCceEEEEcChhHHHHHHHHhcccccCCcceeCCCcCHHHcCcccccc---cccc-------------------
Confidence 89999999999999999999988876542 2 358999844 4554432110 0000
Q ss_pred cCCcCcchhhhhcccccccccCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccc
Q 011969 234 MEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQY 313 (474)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (474)
....+...+++|+|++.+.||++.+++|+..+.++
T Consensus 205 -------------------~~~~~~~~~i~~~grl~~~Kg~~~ll~a~~~l~~~-------------------------- 239 (392)
T cd03805 205 -------------------LIPKSGKKTFLSINRFERKKNIALAIEAFAILKDK-------------------------- 239 (392)
T ss_pred -------------------cccCCCceEEEEEeeecccCChHHHHHHHHHHHhh--------------------------
Confidence 01123334899999999999999999999998773
Q ss_pred cC---CCEEEEEEeCCCCh--------HHHHHHHHH-cCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCch
Q 011969 314 LY---PRLLFIITGKGPDK--------ESYEEKIRR-LRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPM 380 (474)
Q Consensus 314 ~~---~~~~l~ivG~g~~~--------~~~~~~~~~-l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~ 380 (474)
. |+++|+|+|+|+.. +++++.+++ +++ ++|.|+|. ++.+++..+|+.||++++ +|..|+||+
T Consensus 240 -~~~~~~~~l~i~G~~~~~~~~~~~~~~~l~~~~~~~~~l~~~V~f~g~-~~~~~~~~~l~~ad~~l~---~s~~E~~g~ 314 (392)
T cd03805 240 -LAEFKNVRLVIAGGYDPRVAENVEYLEELQRLAEELLLLEDQVIFLPS-ISDSQKELLLSSARALLY---TPSNEHFGI 314 (392)
T ss_pred -cccccCeEEEEEcCCCCCCchhHHHHHHHHHHHHHhcCCCceEEEeCC-CChHHHHHHHhhCeEEEE---CCCcCCCCc
Confidence 3 78999999998753 678888888 888 79999998 999999999999999999 677899999
Q ss_pred HHHHHHhcCCcEEEecccccccccccCCcEEEeC-CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc-cccchHHHHH
Q 011969 381 KVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFS-SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARWATEWE 458 (474)
Q Consensus 381 kv~Eama~G~PVia~~~~~~~e~v~~~~~G~l~~-~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~~ 458 (474)
+++||||||+|||+++.++..|++.++.+|++++ |+++++++|..++++ ++.+++|++++++.. ..++|+...+
T Consensus 315 ~~lEAma~G~PvI~s~~~~~~e~i~~~~~g~~~~~~~~~~a~~i~~l~~~----~~~~~~~~~~a~~~~~~~~s~~~~~~ 390 (392)
T cd03805 315 VPLEAMYAGKPVIACNSGGPLETVVDGETGFLCEPTPEEFAEAMLKLAND----PDLADRMGAAGRKRVKEKFSTEAFAE 390 (392)
T ss_pred hHHHHHHcCCCEEEECCCCcHHHhccCCceEEeCCCHHHHHHHHHHHHhC----hHHHHHHHHHHHHHHHHhcCHHHHhh
Confidence 9999999999999999999999999999999986 799999999999985 778899999998865 5688877554
Q ss_pred H
Q 011969 459 E 459 (474)
Q Consensus 459 ~ 459 (474)
+
T Consensus 391 ~ 391 (392)
T cd03805 391 R 391 (392)
T ss_pred h
Confidence 3
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. |
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=287.24 Aligned_cols=353 Identities=18% Similarity=0.221 Sum_probs=250.5
Q ss_pred eEEEEEeCCCCCCchHHH-HHHHHHhhCCCeEEEEecCCCCCCcceeccCCeEEEEeecCCCCCCCCCchhHHHHHHHHH
Q 011969 6 RACVVVLGDLGRSPRMQY-QALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKP 84 (474)
Q Consensus 6 ~~~i~~~~~~g~~~r~~~-~a~~l~~~~g~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (474)
+++++....+||.+++.. .+..|.++ ||+|+|++...... .....+++.++.++.... ........... ..+
T Consensus 2 ki~~~~~p~~gG~~~~~~~la~~L~~~-G~~v~v~~~~~~~~--~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~- 74 (371)
T cd04962 2 KIGIVCYPTYGGSGVVATELGKALARR-GHEVHFITSSRPFR--LDEYSPNIFFHEVEVPQY--PLFQYPPYDLA-LAS- 74 (371)
T ss_pred ceeEEEEeCCCCccchHHHHHHHHHhc-CCceEEEecCCCcc--hhhhccCeEEEEeccccc--chhhcchhHHH-HHH-
Confidence 356666777888888665 45777776 99999999764221 112234666655441110 00000001010 011
Q ss_pred HHHHHHHHHHHhhhcCCCCEEEEeCCCChhHHHHHHHHHhh---CCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHH
Q 011969 85 LIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSL---RRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEK 161 (474)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~Dvi~~~~~~~~~~~~~~~~~~~~---~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~ 161 (474)
.+...+ +..+||+||+|.+. +....+.++.++ .++|+|++.|+...... ... ..++++++
T Consensus 75 ------~l~~~i-~~~~~divh~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~----~~~----~~~~~~~~ 137 (371)
T cd04962 75 ------KIAEVA-KRYKLDLLHVHYAV--PHAVAAYLAREILGKKDLPVVTTLHGTDITLV----GQD----PSFQPATR 137 (371)
T ss_pred ------HHHHHH-hcCCccEEeecccC--CccHHHHHHHHhcCcCCCcEEEEEcCCccccc----ccc----ccchHHHH
Confidence 111222 23799999998742 222223333332 37899999997632111 111 11235667
Q ss_pred HHhhhcCEEEEeCHHHHHHHHHHhC--CceEEEeCCCC-CCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcC
Q 011969 162 YYGKMANGCLCVTQAMQHELAQNWG--IKATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQK 238 (474)
Q Consensus 162 ~~~~~ad~vi~vS~~~~~~l~~~~~--~~~~vi~n~~~-~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 238 (474)
...+.+|.++++|+.+++.+.+.++ .++.+++|+.+ ..|.+... ...+.+++
T Consensus 138 ~~~~~~d~ii~~s~~~~~~~~~~~~~~~~i~vi~n~~~~~~~~~~~~---~~~~~~~~---------------------- 192 (371)
T cd04962 138 FSIEKSDGVTAVSESLRQETYELFDITKEIEVIPNFVDEDRFRPKPD---EALKRRLG---------------------- 192 (371)
T ss_pred HHHhhCCEEEEcCHHHHHHHHHhcCCcCCEEEecCCcCHhhcCCCch---HHHHHhcC----------------------
Confidence 7788999999999999998887653 34889999854 33433321 12222332
Q ss_pred cchhhhhcccccccccCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCE
Q 011969 239 ADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRL 318 (474)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (474)
..++ ..+++|+|++.+.||++.+++++..+.+ .+++
T Consensus 193 ---------------~~~~-~~~il~~g~l~~~K~~~~li~a~~~l~~----------------------------~~~~ 228 (371)
T cd04962 193 ---------------APEG-EKVLIHISNFRPVKRIDDVIRIFAKVRK----------------------------EVPA 228 (371)
T ss_pred ---------------CCCC-CeEEEEecccccccCHHHHHHHHHHHHh----------------------------cCCc
Confidence 2233 3489999999999999999999998866 2468
Q ss_pred EEEEEeCCCChHHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecc
Q 011969 319 LFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY 397 (474)
Q Consensus 319 ~l~ivG~g~~~~~~~~~~~~l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~ 397 (474)
+|+|+|.|++.+.+++.++++++ ++|.|.|. .+++..+|+.||++++ ||..|++|++++|||+||+|||+++.
T Consensus 229 ~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~---~~~~~~~~~~~d~~v~---ps~~E~~~~~~~EAma~g~PvI~s~~ 302 (371)
T cd04962 229 RLLLVGDGPERSPAERLARELGLQDDVLFLGK---QDHVEELLSIADLFLL---PSEKESFGLAALEAMACGVPVVASNA 302 (371)
T ss_pred eEEEEcCCcCHHHHHHHHHHcCCCceEEEecC---cccHHHHHHhcCEEEe---CCCcCCCccHHHHHHHcCCCEEEeCC
Confidence 99999999999999999999988 68999997 5789999999999999 57789999999999999999999999
Q ss_pred cccccccccCCcEEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHh-ccccchHHHHHHHH
Q 011969 398 SCIEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEM-GLSARWATEWEEHA 461 (474)
Q Consensus 398 ~~~~e~v~~~~~G~l~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~w~~~~~~~~ 461 (474)
++..|++.++.+|++++ |++++++++..++++ ++.+++|++++++. .+.++|+...+++.
T Consensus 303 ~~~~e~i~~~~~G~~~~~~~~~~l~~~i~~l~~~----~~~~~~~~~~~~~~~~~~fs~~~~~~~~~ 365 (371)
T cd04962 303 GGIPEVVKHGETGFLVDVGDVEAMAEYALSLLED----DELWQEFSRAARNRAAERFDSERIVPQYE 365 (371)
T ss_pred CCchhhhcCCCceEEcCCCCHHHHHHHHHHHHhC----HHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 99999999999999996 799999999999984 88999999999987 46788887665533
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-33 Score=296.36 Aligned_cols=366 Identities=19% Similarity=0.142 Sum_probs=239.8
Q ss_pred CCCCc-hHHHHHHHHHhhCCC--eEEEEecCCCC-------CCcceeccCCeEEEEeecCCCCCCCCCchhHHHHHHHHH
Q 011969 15 LGRSP-RMQYQALSLARQMSL--EVDVVAYGGSK-------PHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKP 84 (474)
Q Consensus 15 ~g~~~-r~~~~a~~l~~~~g~--eV~Vv~~~~~~-------~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (474)
.||.. ++...+..|+++ || +|+|+|..... ........+|+++++++..+ ..... .......+..+
T Consensus 25 ~GG~~~~v~~La~~L~~~-G~~~~V~v~t~~~~~~~~~~~~~~~~~~~~~gv~v~r~~~~~--~~~~~-~~~~~~~~~~~ 100 (439)
T TIGR02472 25 TGGQTKYVLELARALARR-SEVEQVDLVTRLIKDAKVSPDYAQPIERIAPGARIVRLPFGP--RRYLR-KELLWPYLDEL 100 (439)
T ss_pred CCCcchHHHHHHHHHHhC-CCCcEEEEEeccccCcCCCCccCCCeeEeCCCcEEEEecCCC--CCCcC-hhhhhhhHHHH
Confidence 34433 455667888886 97 99999953211 11122235799999998322 11111 11111111111
Q ss_pred HHHHHHHHHHHhhh-cCCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhcc--C-CCchHHHHH----
Q 011969 85 LIQFFMLLWFLCVK-IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSL--G-RRSHFVSIY---- 156 (474)
Q Consensus 85 ~~~~~~~~~~~~~~-~~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~--~-~~~~~~~~~---- 156 (474)
... +.. .+.+ ..+||+||+|++ ....++.++++..++|+|++.|+.+........ + ....+...+
T Consensus 101 ~~~---l~~-~~~~~~~~~DvIH~h~~---~~~~~~~~~~~~~~~p~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (439)
T TIGR02472 101 ADN---LLQ-HLRQQGHLPDLIHAHYA---DAGYVGARLSRLLGVPLIFTGHSLGREKRRRLLAAGLKPQQIEKQYNISR 173 (439)
T ss_pred HHH---HHH-HHHHcCCCCCEEEEcch---hHHHHHHHHHHHhCCCEEEecccccchhhhhcccCCCChhhhhhhcchHH
Confidence 111 111 1222 247999999983 344456777778889999999986421110000 0 001111111
Q ss_pred -HHHHHHHhhhcCEEEEeCHHHHHHHHHHh-C---CceEEEeCCC-CCCCCCCChH-HHHHHHHhhhhccCCCCCccccc
Q 011969 157 -RWIEKYYGKMANGCLCVTQAMQHELAQNW-G---IKATVLYDQP-PEFFHPTSLE-EKHELFCRLNKILHQPLGVQDCV 229 (474)
Q Consensus 157 -~~~e~~~~~~ad~vi~vS~~~~~~l~~~~-~---~~~~vi~n~~-~~~f~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~ 229 (474)
...++..++.+|.++++|..........+ + .++.+||||. .+.|.|.... ....++..+..
T Consensus 174 ~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~ki~vIpnGvd~~~f~~~~~~~~~~~~~~~~~~------------ 241 (439)
T TIGR02472 174 RIEAEEETLAHASLVITSTHQEIEEQYALYDSYQPERMQVIPPGVDLSRFYPPQSSEETSEIDNLLAP------------ 241 (439)
T ss_pred HHHHHHHHHHhCCEEEECCHHHHHHHHHhccCCCccceEEECCCcChhhcCCCCccccchhHHHHHHh------------
Confidence 12477888999999999976544333222 2 3488999994 4667664321 11112111110
Q ss_pred cccccCCcCcchhhhhcccccccccCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcC
Q 011969 230 SNAGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISD 309 (474)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (474)
....++.+ +++|+|++.+.||++.|++|++.+.+.
T Consensus 242 ----------------------~~~~~~~~-~i~~vGrl~~~Kg~~~li~A~~~l~~~---------------------- 276 (439)
T TIGR02472 242 ----------------------FLKDPEKP-PILAISRPDRRKNIPSLVEAYGRSPKL---------------------- 276 (439)
T ss_pred ----------------------hccccCCc-EEEEEcCCcccCCHHHHHHHHHhChhh----------------------
Confidence 00123334 899999999999999999999875321
Q ss_pred CccccCCCEEEEEEeCCCChHH-----------HHHHHHHcCC-CcEEEecCCCCcccHHHHHhcc----cEEEeeccCC
Q 011969 310 GKQYLYPRLLFIITGKGPDKES-----------YEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSA----DLGVCLHTSS 373 (474)
Q Consensus 310 ~~~~~~~~~~l~ivG~g~~~~~-----------~~~~~~~l~l-~~V~f~g~~v~~~~~~~~l~~a----dv~v~~~~~s 373 (474)
+ ..+++. +|+|+|++.+. +.+.++++++ ++|.|.|. ++.++++.+|+.| |++|+ ||
T Consensus 277 -~--~~~~l~-li~G~g~~~~~l~~~~~~~~~~~~~~~~~~~l~~~V~f~g~-~~~~~~~~~~~~a~~~~Dv~v~---pS 348 (439)
T TIGR02472 277 -Q--EMANLV-LVLGCRDDIRKMESQQREVLQKVLLLIDRYDLYGKVAYPKH-HRPDDVPELYRLAARSRGIFVN---PA 348 (439)
T ss_pred -h--hhccEE-EEeCCccccccccHHHHHHHHHHHHHHHHcCCCceEEecCC-CCHHHHHHHHHHHhhcCCEEec---cc
Confidence 0 023443 36788775322 3445677888 78999998 8999999999987 99999 68
Q ss_pred CCCCCchHHHHHHhcCCcEEEecccccccccccCCcEEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc-cc
Q 011969 374 SGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LS 450 (474)
Q Consensus 374 ~~e~~p~kv~Eama~G~PVia~~~~~~~e~v~~~~~G~l~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~-~~ 450 (474)
..|+||++++||||||+|||+|+.+++.|++.++.+|++++ |+++++++|..++++ ++.+++|++++++.. +.
T Consensus 349 ~~E~fg~~~lEAma~G~PvV~s~~gg~~eiv~~~~~G~lv~~~d~~~la~~i~~ll~~----~~~~~~~~~~a~~~~~~~ 424 (439)
T TIGR02472 349 LTEPFGLTLLEAAACGLPIVATDDGGPRDIIANCRNGLLVDVLDLEAIASALEDALSD----SSQWQLWSRNGIEGVRRH 424 (439)
T ss_pred ccCCcccHHHHHHHhCCCEEEeCCCCcHHHhcCCCcEEEeCCCCHHHHHHHHHHHHhC----HHHHHHHHHHHHHHHHHh
Confidence 88999999999999999999999999999999999999986 799999999999984 888999999998754 57
Q ss_pred cchHHHHHHH
Q 011969 451 ARWATEWEEH 460 (474)
Q Consensus 451 ~~w~~~~~~~ 460 (474)
++|+...+++
T Consensus 425 fsw~~~~~~~ 434 (439)
T TIGR02472 425 YSWDAHVEKY 434 (439)
T ss_pred CCHHHHHHHH
Confidence 8887766554
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. |
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-33 Score=283.13 Aligned_cols=360 Identities=20% Similarity=0.203 Sum_probs=253.2
Q ss_pred CCCCch-HHHHHHHHHhhCCCeEEEEecCCCCCCcc-eeccCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHHHHH
Q 011969 15 LGRSPR-MQYQALSLARQMSLEVDVVAYGGSKPHAA-ILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLL 92 (474)
Q Consensus 15 ~g~~~r-~~~~a~~l~~~~g~eV~Vv~~~~~~~~~~-~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (474)
.||..+ +...+..|+++ ||+|+|++......... .....++.+++++..+ .....+. ............ +
T Consensus 20 ~GG~~~~~~~l~~~L~~~-g~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~----~ 91 (398)
T cd03800 20 TGGQNVYVLELARALARL-GHEVDIFTRRIDDALPPIVELAPGVRVVRVPAGP--AEYLPKE-ELWPYLDEFADD----L 91 (398)
T ss_pred CCceeehHHHHHHHHhcc-CceEEEEEecCCcccCCccccccceEEEeccccc--ccCCChh-hcchhHHHHHHH----H
Confidence 566664 45677888886 99999999654432211 3345689988887211 1111110 000111111111 1
Q ss_pred HHHhhhc-CCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhhhcCEEE
Q 011969 93 WFLCVKI-ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCL 171 (474)
Q Consensus 93 ~~~~~~~-~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi 171 (474)
...+.+. .+||+||++.+. +..++..+++..++|+|++.|+.+.....................++.+++.||.++
T Consensus 92 ~~~~~~~~~~~Div~~~~~~---~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii 168 (398)
T cd03800 92 LRFLRREGGRPDLIHAHYWD---SGLVALLLARRLGIPLVHTFHSLGAVKRRHLGAADTYEPARRIEAEERLLRAADRVI 168 (398)
T ss_pred HHHHHhcCCCccEEEEecCc---cchHHHHHHhhcCCceEEEeecccccCCcccccccccchhhhhhHHHHHHhhCCEEE
Confidence 1112221 289999998742 333456667778899999999874211100000111012233466788889999999
Q ss_pred EeCHHHHHHHHHHhCC---ceEEEeCCCC-CCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhcc
Q 011969 172 CVTQAMQHELAQNWGI---KATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSL 247 (474)
Q Consensus 172 ~vS~~~~~~l~~~~~~---~~~vi~n~~~-~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (474)
++|+.+++.+.+.++. ++.+++|+.+ +.|.+..... ..+..++
T Consensus 169 ~~s~~~~~~~~~~~~~~~~~~~vi~ng~~~~~~~~~~~~~--~~~~~~~------------------------------- 215 (398)
T cd03800 169 ASTPQEAEELYSLYGAYPRRIRVVPPGVDLERFTPYGRAE--ARRARLL------------------------------- 215 (398)
T ss_pred EcCHHHHHHHHHHccccccccEEECCCCCccceecccchh--hHHHhhc-------------------------------
Confidence 9999999988876543 2789999854 4454432111 1011111
Q ss_pred cccccccCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCC
Q 011969 248 AGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP 327 (474)
Q Consensus 248 ~~~~~~~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~ 327 (474)
.+.++ .+++|+|++.+.||++.+++|+..+.++ .++++|+|+|+++
T Consensus 216 ------~~~~~-~~i~~~gr~~~~k~~~~ll~a~~~l~~~---------------------------~~~~~l~i~G~~~ 261 (398)
T cd03800 216 ------RDPDK-PRILAVGRLDPRKGIDTLIRAYAELPEL---------------------------RERANLVIVGGPR 261 (398)
T ss_pred ------cCCCC-cEEEEEcccccccCHHHHHHHHHHHHHh---------------------------CCCeEEEEEECCC
Confidence 12333 3899999999999999999999998763 6789999999886
Q ss_pred Ch------HHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEeccccc
Q 011969 328 DK------ESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI 400 (474)
Q Consensus 328 ~~------~~~~~~~~~l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~~~ 400 (474)
.. +.+++.++.+++ ++|.|+|. ++.+++..+++.||++++ ||..|++|++++|||+||+|||+++.++.
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~v~~~g~-~~~~~~~~~~~~adi~l~---ps~~e~~~~~l~Ea~a~G~Pvi~s~~~~~ 337 (398)
T cd03800 262 DDILAMDEEELRELARELGVIDRVDFPGR-VSREDLPALYRAADVFVN---PALYEPFGLTALEAMACGLPVVATAVGGP 337 (398)
T ss_pred CcchhhhhHHHHHHHHhcCCCceEEEecc-CCHHHHHHHHHhCCEEEe---cccccccCcHHHHHHhcCCCEEECCCCCH
Confidence 53 335667788888 79999998 999999999999999999 67789999999999999999999999999
Q ss_pred ccccccCCcEEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc-cccchHHHHHHH
Q 011969 401 EELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARWATEWEEH 460 (474)
Q Consensus 401 ~e~v~~~~~G~l~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~~~~ 460 (474)
.|++.++++|++++ |+++++++|.+++++ ++.++++++++++.. +.++|+...++.
T Consensus 338 ~e~i~~~~~g~~~~~~~~~~l~~~i~~l~~~----~~~~~~~~~~a~~~~~~~~s~~~~~~~~ 396 (398)
T cd03800 338 RDIVVDGVTGLLVDPRDPEALAAALRRLLTD----PALRRRLSRAGLRRARARYTWERVAARL 396 (398)
T ss_pred HHHccCCCCeEEeCCCCHHHHHHHHHHHHhC----HHHHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 99999999999996 699999999999984 889999999999876 778887665543
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. |
| >PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-32 Score=287.84 Aligned_cols=273 Identities=19% Similarity=0.221 Sum_probs=211.8
Q ss_pred hcCCCCEEEEeCCCChhHHHHHHHHHh--hCCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhhhcCEEEEeCH
Q 011969 98 KIASPDVFLVQNPPSVPTLVAVKWASS--LRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQ 175 (474)
Q Consensus 98 ~~~~~Dvi~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~ 175 (474)
+..+||+||+|..+. ...+..++. ..+.++++++|+... .... ....++...+..++.||.++++|+
T Consensus 115 ~~~~~diihaH~~~~---~~~~~~~~~~~~~~~~~~~t~Hg~d~-------~~~~-~~~~~~~~~~~~~~~ad~vv~~S~ 183 (406)
T PRK15427 115 TPFVADVFIAHFGPA---GVTAAKLRELGVLRGKIATIFHGIDI-------SSRE-VLNHYTPEYQQLFRRGDLMLPISD 183 (406)
T ss_pred ccCCCCEEEEcCChH---HHHHHHHHHhCCCCCCeEEEEccccc-------ccch-hhhhhhHHHHHHHHhCCEEEECCH
Confidence 346899999998532 222333433 234466889997621 1111 111112234455688999999999
Q ss_pred HHHHHHHHHhCCc---eEEEeCCCC-CCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhcccccc
Q 011969 176 AMQHELAQNWGIK---ATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGID 251 (474)
Q Consensus 176 ~~~~~l~~~~~~~---~~vi~n~~~-~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (474)
.+++.+.+. +.+ +.+++||.+ +.|.+...
T Consensus 184 ~~~~~l~~~-g~~~~ki~vi~nGvd~~~f~~~~~---------------------------------------------- 216 (406)
T PRK15427 184 LWAGRLQKM-GCPPEKIAVSRMGVDMTRFSPRPV---------------------------------------------- 216 (406)
T ss_pred HHHHHHHHc-CCCHHHEEEcCCCCCHHHcCCCcc----------------------------------------------
Confidence 999998764 543 789999954 44533210
Q ss_pred cccCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCChHH
Q 011969 252 VFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKES 331 (474)
Q Consensus 252 ~~~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~ 331 (474)
...+.++.++|+|++.+.||++.+++|++.+.++ .++++|+|+|+|+..++
T Consensus 217 --~~~~~~~~il~vGrl~~~Kg~~~ll~a~~~l~~~---------------------------~~~~~l~ivG~G~~~~~ 267 (406)
T PRK15427 217 --KAPATPLEIISVARLTEKKGLHVAIEACRQLKEQ---------------------------GVAFRYRILGIGPWERR 267 (406)
T ss_pred --ccCCCCeEEEEEeCcchhcCHHHHHHHHHHHHhh---------------------------CCCEEEEEEECchhHHH
Confidence 0123445899999999999999999999998773 68899999999999999
Q ss_pred HHHHHHHcCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCC-C--CCCCchHHHHHHhcCCcEEEecccccccccccC
Q 011969 332 YEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSS-S--GLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVD 407 (474)
Q Consensus 332 ~~~~~~~l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s-~--~e~~p~kv~Eama~G~PVia~~~~~~~e~v~~~ 407 (474)
+++.++++++ ++|.|.|. ++.+++..+|+.||++|+|.... . .|++|++++||||||+|||+|+.+++.|++.++
T Consensus 268 l~~~~~~~~l~~~V~~~G~-~~~~el~~~l~~aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~E~v~~~ 346 (406)
T PRK15427 268 LRTLIEQYQLEDVVEMPGF-KPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPELVEAD 346 (406)
T ss_pred HHHHHHHcCCCCeEEEeCC-CCHHHHHHHHHhCCEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCchhhhcCC
Confidence 9999999999 78999987 99999999999999999963221 1 399999999999999999999999999999999
Q ss_pred CcEEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc-cccchHHHHHHHH
Q 011969 408 KNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARWATEWEEHA 461 (474)
Q Consensus 408 ~~G~l~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~~~~~ 461 (474)
.+|++++ |+++++++|.++++. |++.+++|++++++.. +.++|+...++..
T Consensus 347 ~~G~lv~~~d~~~la~ai~~l~~~---d~~~~~~~~~~ar~~v~~~f~~~~~~~~l~ 400 (406)
T PRK15427 347 KSGWLVPENDAQALAQRLAAFSQL---DTDELAPVVKRAREKVETDFNQQVINRELA 400 (406)
T ss_pred CceEEeCCCCHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 9999996 799999999999983 4888999999998865 5688877665543
|
|
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-32 Score=272.68 Aligned_cols=360 Identities=23% Similarity=0.306 Sum_probs=258.5
Q ss_pred CCCchHHHHHHHHHhhCCCeEEEEecCCCCCCcce------eccCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHH
Q 011969 16 GRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAI------LEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFF 89 (474)
Q Consensus 16 g~~~r~~~~a~~l~~~~g~eV~Vv~~~~~~~~~~~------~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (474)
|...++...+..|+++ ||+|++++.......... ....+++++.++...... ......+.........
T Consensus 15 G~~~~~~~l~~~L~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~-- 88 (394)
T cd03794 15 GGAFRTTELAEELVKR-GHEVTVITGSPNYPSGKIYKGYKREEVDGVRVHRVPLPPYKK---NGLLKRLLNYLSFALS-- 88 (394)
T ss_pred CcceeHHHHHHHHHhC-CceEEEEecCCCcccccccccceEEecCCeEEEEEecCCCCc---cchHHHHHhhhHHHHH--
Confidence 4566677788899986 999999997654433222 345689998888332211 1111111111111111
Q ss_pred HHHHHHhhhcCCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhc-cCCCchH-HHHHHHHHHHHhhhc
Q 011969 90 MLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLS-LGRRSHF-VSIYRWIEKYYGKMA 167 (474)
Q Consensus 90 ~~~~~~~~~~~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~-~~~~~~~-~~~~~~~e~~~~~~a 167 (474)
....+..+..+||+||++++.. .....+...++..++|+++++|+......... ....... ....+++++...+.+
T Consensus 89 -~~~~~~~~~~~~D~v~~~~~~~-~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (394)
T cd03794 89 -ALLALLKRRRRPDVIIATSPPL-LIALAALLLARLKGAPFVLEVRDLWPESAVALGLLKNGSLLYRLLRKLERLIYRRA 166 (394)
T ss_pred -HHHHHHhcccCCCEEEEcCChH-HHHHHHHHHHHhcCCCEEEEehhhcchhHHHccCccccchHHHHHHHHHHHHHhcC
Confidence 1122221358899999998433 33334566666678999999999743222111 1112222 266778899999999
Q ss_pred CEEEEeCHHHHHHHHHHhC---CceEEEeCCCC-CCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhh
Q 011969 168 NGCLCVTQAMQHELAQNWG---IKATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETI 243 (474)
Q Consensus 168 d~vi~vS~~~~~~l~~~~~---~~~~vi~n~~~-~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (474)
|.++++|+.+++.+.. .+ .++.+++|+.+ ..+.+...... +.++
T Consensus 167 d~vi~~s~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~---~~~~---------------------------- 214 (394)
T cd03794 167 DAIVVISPGMREYLVR-RGVPPEKISVIPNGVDLELFKPPPADES---LRKE---------------------------- 214 (394)
T ss_pred CEEEEECHHHHHHHHh-cCCCcCceEEcCCCCCHHHcCCccchhh---hhhc----------------------------
Confidence 9999999999998873 33 34889999854 33333321110 1111
Q ss_pred hhcccccccccCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEE
Q 011969 244 FTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIIT 323 (474)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iv 323 (474)
.....+..++++|++.+.||++.+++++..+.+ . ++++|+|+
T Consensus 215 ----------~~~~~~~~i~~~G~~~~~k~~~~l~~~~~~l~~---------------------------~-~~~~l~i~ 256 (394)
T cd03794 215 ----------LGLDDKFVVLYAGNIGRAQGLDTLLEAAALLKD---------------------------R-PDIRFLIV 256 (394)
T ss_pred ----------cCCCCcEEEEEecCcccccCHHHHHHHHHHHhh---------------------------c-CCeEEEEe
Confidence 113345589999999999999999999999876 2 68999999
Q ss_pred eCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcccEEEeeccCCC--CCCCchHHHHHHhcCCcEEEecccccc
Q 011969 324 GKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS--GLDLPMKVVDMFGCGLPVCAVSYSCIE 401 (474)
Q Consensus 324 G~g~~~~~~~~~~~~l~l~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~--~e~~p~kv~Eama~G~PVia~~~~~~~ 401 (474)
|+|+..+.+++.+...++++|.|.|. ++.+++..+|+.||++++|..... +.++|++++|||+||+|||+++.++..
T Consensus 257 G~~~~~~~~~~~~~~~~~~~v~~~g~-~~~~~~~~~~~~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~ 335 (394)
T cd03794 257 GDGPEKEELKELAKALGLDNVTFLGR-VPKEELPELLAAADVGLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESA 335 (394)
T ss_pred CCcccHHHHHHHHHHcCCCcEEEeCC-CChHHHHHHHHhhCeeEEeccCcccccccCchHHHHHHHCCCcEEEecCCCch
Confidence 99999888888877778889999996 999999999999999999644432 566799999999999999999999999
Q ss_pred cccccCCcEEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhcc-ccchHHHHH
Q 011969 402 ELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGL-SARWATEWE 458 (474)
Q Consensus 402 e~v~~~~~G~l~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~w~~~~~ 458 (474)
+.+.++.+|++++ |+++++++|..+++ |++.++++++++++... .++|+..-+
T Consensus 336 ~~~~~~~~g~~~~~~~~~~l~~~i~~~~~----~~~~~~~~~~~~~~~~~~~~s~~~~~~ 391 (394)
T cd03794 336 ELVEEAGAGLVVPPGDPEALAAAILELLD----DPEERAEMGENGRRYVEEKFSREKLAE 391 (394)
T ss_pred hhhccCCcceEeCCCCHHHHHHHHHHHHh----ChHHHHHHHHHHHHHHHHhhcHHHHHH
Confidence 9999889999986 79999999999997 48899999999998764 677765443
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. |
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-32 Score=285.14 Aligned_cols=354 Identities=17% Similarity=0.161 Sum_probs=238.0
Q ss_pred hHHHHHHHHHhhCCCeEEEEecCCCCCCcceeccCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhc
Q 011969 20 RMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKI 99 (474)
Q Consensus 20 r~~~~a~~l~~~~g~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (474)
.....|..|+++ ||+|+|+|..+...... |+++++++...............+.........++..+..+..+.
T Consensus 12 ~~~~la~~L~~~-G~~v~~~~~~~~~~~~~-----~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (396)
T cd03818 12 QFRHLAPALAAQ-GHEVVFLTEPNAAPPPG-----GVRVVRYRPPRGPTSGTHPYLREFEEAVLRGQAVARALLALRAKG 85 (396)
T ss_pred hHHHHHHHHHHC-CCEEEEEecCCCCCCCC-----CeeEEEecCCCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHhcC
Confidence 355678999997 99999999876542211 799999884322111111111111111111112222333333344
Q ss_pred CCCCEEEEeCCCChhHHHHHHHHHh-hCCCcEEEEecCchhhhhhhc--cC---CCch--HH--HHHHHHHHHHhhhcCE
Q 011969 100 ASPDVFLVQNPPSVPTLVAVKWASS-LRRSAFIVDWHNFGYTLLSLS--LG---RRSH--FV--SIYRWIEKYYGKMANG 169 (474)
Q Consensus 100 ~~~Dvi~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~h~~~~~~~~~~--~~---~~~~--~~--~~~~~~e~~~~~~ad~ 169 (474)
.+||+||+|.... .. ..++. ..+.|+|...|-+ +...... +. .... .. +....+....++.||.
T Consensus 86 ~~pdvi~~h~~~~--~~---~~l~~~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ 159 (396)
T cd03818 86 FRPDVIVAHPGWG--ET---LFLKDVWPDAPLIGYFEFY-YRAEGADVGFDPEFPPSLDDALRLRNRNALILLALAQADA 159 (396)
T ss_pred CCCCEEEECCccc--hh---hhHHHhCCCCCEEEEEeee-ecCCCCCCCCCCCCCCchhHHHHHHHhhhHhHHHHHhCCE
Confidence 6899999997422 12 22233 3567877655422 1110000 01 1111 01 1112234566789999
Q ss_pred EEEeCHHHHHHHHHHhCCceEEEeCCCC-CCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhccc
Q 011969 170 CLCVTQAMQHELAQNWGIKATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLA 248 (474)
Q Consensus 170 vi~vS~~~~~~l~~~~~~~~~vi~n~~~-~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (474)
+|++|+.+++.+.+.++.++.+|+||.+ +.|.|..... .......
T Consensus 160 vi~~s~~~~~~~~~~~~~ki~vI~ngvd~~~f~~~~~~~-~~~~~~~--------------------------------- 205 (396)
T cd03818 160 GVSPTRWQRSTFPAELRSRISVIHDGIDTDRLRPDPQAR-LRLPNGR--------------------------------- 205 (396)
T ss_pred EECCCHHHHhhCcHhhccceEEeCCCccccccCCCchhh-hcccccc---------------------------------
Confidence 9999999999888777777999999954 6666543211 0100000
Q ss_pred ccccccCCCCCeEEEEEee-cccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCC
Q 011969 249 GIDVFLKPNRPALVVSSTS-WTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP 327 (474)
Q Consensus 249 ~~~~~~~~~~~~~i~~~G~-l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~ 327 (474)
.+.++.+ +++|+|+ +.+.||++.+++|+..+.++ .|+++|+|+|++.
T Consensus 206 ----~~~~~~~-~i~~vgR~l~~~Kg~~~ll~a~~~l~~~---------------------------~~~~~lvivG~~~ 253 (396)
T cd03818 206 ----VLTPGDE-VITFVARNLEPYRGFHVFMRALPRLLRA---------------------------RPDARVVIVGGDG 253 (396)
T ss_pred ----cCCCCCe-EEEEECCCcccccCHHHHHHHHHHHHHH---------------------------CCCcEEEEEcCCC
Confidence 0123333 8899997 99999999999999998763 6899999999742
Q ss_pred C--------hH-HHHHHHHHcC----CCcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEE
Q 011969 328 D--------KE-SYEEKIRRLR----LKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCA 394 (474)
Q Consensus 328 ~--------~~-~~~~~~~~l~----l~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia 394 (474)
. .+ ..++..++++ .++|.|+|. +|.+++..+|+.||++++ +|..+++|++++||||||+|||+
T Consensus 254 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~V~f~G~-v~~~~~~~~l~~adv~v~---~s~~e~~~~~llEAmA~G~PVIa 329 (396)
T cd03818 254 VSYGAPPPDGESWKQHMLDELGGRLDLSRVHFLGR-VPYDQYLALLQVSDVHVY---LTYPFVLSWSLLEAMACGCLVVG 329 (396)
T ss_pred cccCCCCCCcccHHHHHHHHhhcccCcceEEEeCC-CCHHHHHHHHHhCcEEEE---cCcccccchHHHHHHHCCCCEEE
Confidence 1 11 1223334433 479999998 999999999999999999 67888999999999999999999
Q ss_pred ecccccccccccCCcEEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccc-cchHHHHHH
Q 011969 395 VSYSCIEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLS-ARWATEWEE 459 (474)
Q Consensus 395 ~~~~~~~e~v~~~~~G~l~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~w~~~~~~ 459 (474)
++.+++.|++.++.+|++++ |+++++++|..++++ ++.+++|++++++.+.+ ++|+...++
T Consensus 330 s~~~g~~e~i~~~~~G~lv~~~d~~~la~~i~~ll~~----~~~~~~l~~~ar~~~~~~fs~~~~~~~ 393 (396)
T cd03818 330 SDTAPVREVITDGENGLLVDFFDPDALAAAVIELLDD----PARRARLRRAARRTALRYDLLSVCLPR 393 (396)
T ss_pred cCCCCchhhcccCCceEEcCCCCHHHHHHHHHHHHhC----HHHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 99999999999999999996 799999999999984 88999999999987744 777655444
|
ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). |
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-32 Score=271.58 Aligned_cols=351 Identities=20% Similarity=0.265 Sum_probs=248.2
Q ss_pred CCchHHHHHHHHHhhCCCeEEEEecCCCCCCcceeccCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHh
Q 011969 17 RSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLC 96 (474)
Q Consensus 17 ~~~r~~~~a~~l~~~~g~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (474)
.+.++...+..|.++ ||+|++++......... ....++...... .....+. .... .....+.. .
T Consensus 16 ~~~~~~~l~~~L~~~-g~~v~v~~~~~~~~~~~-~~~~~~~~~~~~-----~~~~~~~----~~~~----~~~~~~~~-~ 79 (374)
T cd03817 16 VATSIRRLAEELEKR-GHEVYVVAPSYPGAPEE-EEVVVVRPFRVP-----TFKYPDF----RLPL----PIPRALII-I 79 (374)
T ss_pred eehHHHHHHHHHHHc-CCeEEEEeCCCCCCCcc-cccccccccccc-----cchhhhh----hccc----cHHHHHHH-H
Confidence 345677778888886 99999999765432211 111112111111 0000000 0000 00001111 1
Q ss_pred hhcCCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCchHHHHHH-HHHHHHhhhcCEEEEeCH
Q 011969 97 VKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYR-WIEKYYGKMANGCLCVTQ 175 (474)
Q Consensus 97 ~~~~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~-~~e~~~~~~ad~vi~vS~ 175 (474)
.+..+||+||++++.. ....+..+++..++|+++++|+..................... ++++.+.+.||.++++|+
T Consensus 80 ~~~~~~Div~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~ 157 (374)
T cd03817 80 LKELGPDIVHTHTPFS--LGLLGLRVARKLGIPVVATYHTMYEDYTHYVPLGRLLARAVVRRKLSRRFYNRCDAVIAPSE 157 (374)
T ss_pred HhhcCCCEEEECCchh--hhhHHHHHHHHcCCCEEEEecCCHHHHHHHHhcccchhHHHHHHHHHHHHhhhCCEEEeccH
Confidence 2337899999998633 3334556666778999999998853222111111222222233 678888999999999999
Q ss_pred HHHHHHHHHhCC--ceEEEeCCCC-CCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhccccccc
Q 011969 176 AMQHELAQNWGI--KATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDV 252 (474)
Q Consensus 176 ~~~~~l~~~~~~--~~~vi~n~~~-~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (474)
.+++.+.+. +. ++.+++++.+ ..+.+.... ..+..++
T Consensus 158 ~~~~~~~~~-~~~~~~~vi~~~~~~~~~~~~~~~---~~~~~~~------------------------------------ 197 (374)
T cd03817 158 KIADLLREY-GVKRPIEVIPTGIDLDRFEPVDGD---DERRKLG------------------------------------ 197 (374)
T ss_pred HHHHHHHhc-CCCCceEEcCCccchhccCccchh---HHHHhcC------------------------------------
Confidence 999888764 43 3788898844 444443221 1122222
Q ss_pred ccCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCChHHH
Q 011969 253 FLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESY 332 (474)
Q Consensus 253 ~~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~~ 332 (474)
. .+.+..++|+|++.+.||++.+++++..+.++ .++++|+++|+|+..+++
T Consensus 198 -~-~~~~~~i~~~G~~~~~k~~~~l~~~~~~~~~~---------------------------~~~~~l~i~G~~~~~~~~ 248 (374)
T cd03817 198 -I-PEDEPVLLYVGRLAKEKNIDFLIRAFARLLKE---------------------------EPDVKLVIVGDGPEREEL 248 (374)
T ss_pred -C-CCCCeEEEEEeeeecccCHHHHHHHHHHHHHh---------------------------CCCeEEEEEeCCchHHHH
Confidence 1 23344899999999999999999999998773 578999999999998999
Q ss_pred HHHHHHcCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecccccccccccCCcEE
Q 011969 333 EEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGL 411 (474)
Q Consensus 333 ~~~~~~l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~~~~e~v~~~~~G~ 411 (474)
++.++++++ ++|.|.|. ++.+++..+|+.||++++ ++..+++|++++|||+||+|||+++.++..+++.++.+|+
T Consensus 249 ~~~~~~~~~~~~v~~~g~-~~~~~~~~~~~~ad~~l~---~s~~e~~~~~~~Ea~~~g~PvI~~~~~~~~~~i~~~~~g~ 324 (374)
T cd03817 249 EELARELGLADRVIFTGF-VPREELPDYYKAADLFVF---ASTTETQGLVLLEAMAAGLPVVAVDAPGLPDLVADGENGF 324 (374)
T ss_pred HHHHHHcCCCCcEEEecc-CChHHHHHHHHHcCEEEe---cccccCcChHHHHHHHcCCcEEEeCCCChhhheecCceeE
Confidence 999998888 69999998 999999999999999999 5777889999999999999999999999999999999999
Q ss_pred EeCC-HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHHH
Q 011969 412 LFSS-SSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAK 462 (474)
Q Consensus 412 l~~~-~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~ 462 (474)
++++ .++++++|..++++ ++.+++|++++++...++.|...++++++
T Consensus 325 ~~~~~~~~~~~~i~~l~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (374)
T cd03817 325 LFPPGDEALAEALLRLLQD----PELRRRLSKNAEESAEKFSFAKKVEKLYE 372 (374)
T ss_pred EeCCCCHHHHHHHHHHHhC----hHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9974 33999999999985 78889999999998766666666666554
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. |
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-32 Score=279.83 Aligned_cols=346 Identities=19% Similarity=0.288 Sum_probs=244.2
Q ss_pred CCCch-HHHHHHHHHhhCCCeEEEEecCCCCCCcceeccCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHHHHHHH
Q 011969 16 GRSPR-MQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWF 94 (474)
Q Consensus 16 g~~~r-~~~~a~~l~~~~g~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (474)
||.++ +...+..|.++ ++|+|++..... ....++++++++.+.. .......+... . ..+.
T Consensus 16 GG~~~~v~~l~~~l~~~--~~v~v~~~~~~~-----~~~~~~~~~~~~~~~~----~~~~~~~~~~~-------~-~~~~ 76 (388)
T TIGR02149 16 GGAGVHVEELTRELARL--MDVDVRCFGDQR-----FDSEGLTVKGYRPWSE----LKEANKALGTF-------S-VDLA 76 (388)
T ss_pred ccHhHHHHHHHHHHHHh--cCeeEEcCCCch-----hcCCCeEEEEecChhh----ccchhhhhhhh-------h-HHHH
Confidence 44433 44455666654 788888876432 2345888887762211 11111111111 0 0111
Q ss_pred HhhhcCCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhhhcCEEEEeC
Q 011969 95 LCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVT 174 (474)
Q Consensus 95 ~~~~~~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS 174 (474)
...+..++|+||+|++. ..+++.+++++.++|+|+++|+...... ...........+..++++...+.||.++++|
T Consensus 77 ~~~~~~~~divh~~~~~---~~~~~~~~~~~~~~p~v~~~h~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S 152 (388)
T TIGR02149 77 MANDPVDADVVHSHTWY---TFLAGHLAKKLYDKPLVVTAHSLEPLRP-WKEEQLGGGYKLSSWAEKTAIEAADRVIAVS 152 (388)
T ss_pred HhhCCCCCCeEeecchh---hhhHHHHHHHhcCCCEEEEeeccccccc-ccccccccchhHHHHHHHHHHhhCCEEEEcc
Confidence 22233579999999842 2335666777889999999998731100 0000001112345688899999999999999
Q ss_pred HHHHHHHHHHh-CC---ceEEEeCCCC-CCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhcccc
Q 011969 175 QAMQHELAQNW-GI---KATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAG 249 (474)
Q Consensus 175 ~~~~~~l~~~~-~~---~~~vi~n~~~-~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (474)
+.+++.+.+.+ +. ++.+++|+.+ +.|.+.. ....+.+++
T Consensus 153 ~~~~~~~~~~~~~~~~~~i~vi~ng~~~~~~~~~~---~~~~~~~~~--------------------------------- 196 (388)
T TIGR02149 153 GGMREDILKYYPDLDPEKVHVIYNGIDTKEYKPDD---GNVVLDRYG--------------------------------- 196 (388)
T ss_pred HHHHHHHHHHcCCCCcceEEEecCCCChhhcCCCc---hHHHHHHhC---------------------------------
Confidence 99999988766 32 3789999954 5555432 233444544
Q ss_pred cccccCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCCh
Q 011969 250 IDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK 329 (474)
Q Consensus 250 ~~~~~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~ 329 (474)
++++.+ +++|+|++.+.||++.|++|++.+. ++++++++|+|++.
T Consensus 197 ----~~~~~~-~i~~~Grl~~~Kg~~~li~a~~~l~------------------------------~~~~l~i~g~g~~~ 241 (388)
T TIGR02149 197 ----IDRSRP-YILFVGRITRQKGVPHLLDAVHYIP------------------------------KDVQVVLCAGAPDT 241 (388)
T ss_pred ----CCCCce-EEEEEcccccccCHHHHHHHHHHHh------------------------------hcCcEEEEeCCCCc
Confidence 223344 8999999999999999999998863 35788998887664
Q ss_pred ----HHHHHHHHHcCC--CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecccccccc
Q 011969 330 ----ESYEEKIRRLRL--KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEEL 403 (474)
Q Consensus 330 ----~~~~~~~~~l~l--~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~~~~e~ 403 (474)
+++++.+++++. ++|.|.+++++.+++..+|+.||++|+ ||..|++|++++|||+||+|||+++.++..|+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~aDv~v~---ps~~e~~g~~~lEA~a~G~PvI~s~~~~~~e~ 318 (388)
T TIGR02149 242 PEVAEEVRQAVALLDRNRTGIIWINKMLPKEELVELLSNAEVFVC---PSIYEPLGIVNLEAMACGTPVVASATGGIPEV 318 (388)
T ss_pred HHHHHHHHHHHHHhccccCceEEecCCCCHHHHHHHHHhCCEEEe---CCccCCCChHHHHHHHcCCCEEEeCCCCHHHH
Confidence 345555566655 358887766999999999999999999 68889999999999999999999999999999
Q ss_pred cccCCcEEEeC--CH------HHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc-cccchHHHHHHHHH
Q 011969 404 VKVDKNGLLFS--SS------SELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARWATEWEEHAK 462 (474)
Q Consensus 404 v~~~~~G~l~~--~~------~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~~~~~~ 462 (474)
+.++.+|++++ +. ++++++|.+++++ ++.+++|++++++.. ++++|+...+++.+
T Consensus 319 i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~l~~~----~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~ 382 (388)
T TIGR02149 319 VVDGETGFLVPPDNSDADGFQAELAKAINILLAD----PELAKKMGIAGRKRAEEEFSWGSIAKKTVE 382 (388)
T ss_pred hhCCCceEEcCCCCCcccchHHHHHHHHHHHHhC----HHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 99999999996 56 8999999999984 889999999998865 57888877666443
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor. |
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-32 Score=279.35 Aligned_cols=274 Identities=21% Similarity=0.231 Sum_probs=215.1
Q ss_pred hcCCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhhhcCEEEEeCHHH
Q 011969 98 KIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAM 177 (474)
Q Consensus 98 ~~~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~ 177 (474)
+..+||+||++... ... .+..+++..++|+++++|+....... ....... .+.+..+++.+.+.+|.++++|+.+
T Consensus 79 ~~~~~dvvh~~~~~--~~~-~~~~~~~~~~~p~i~~~h~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~d~ii~~s~~~ 153 (367)
T cd05844 79 RRHRPDLVHAHFGF--DGV-YALPLARRLGVPLVVTFHGFDATTSL-ALLLRSR-WALYARRRRRLARRAALFIAVSQFI 153 (367)
T ss_pred HhhCCCEEEeccCc--hHH-HHHHHHHHcCCCEEEEEeCccccccc-hhhcccc-hhHHHHHHHHHHHhcCEEEECCHHH
Confidence 34789999998743 222 34445667789999999976321110 0000011 2345567788889999999999999
Q ss_pred HHHHHHHhCC---ceEEEeCCCC-CCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhcccccccc
Q 011969 178 QHELAQNWGI---KATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVF 253 (474)
Q Consensus 178 ~~~l~~~~~~---~~~vi~n~~~-~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (474)
++.+.+. +. ++.+++|+.+ +.|.+..
T Consensus 154 ~~~~~~~-~~~~~~i~vi~~g~d~~~~~~~~------------------------------------------------- 183 (367)
T cd05844 154 RDRLLAL-GFPPEKVHVHPIGVDTAKFTPAT------------------------------------------------- 183 (367)
T ss_pred HHHHHHc-CCCHHHeEEecCCCCHHhcCCCC-------------------------------------------------
Confidence 9988874 44 3788999854 3343321
Q ss_pred cCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCChHHHH
Q 011969 254 LKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYE 333 (474)
Q Consensus 254 ~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~~~ 333 (474)
....+..++|+|++.+.||++.+++|+..+.++ .++++|+|+|+|+..++++
T Consensus 184 -~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~---------------------------~~~~~l~ivG~g~~~~~~~ 235 (367)
T cd05844 184 -PARRPPRILFVGRFVEKKGPLLLLEAFARLARR---------------------------VPEVRLVIIGDGPLLAALE 235 (367)
T ss_pred -CCCCCcEEEEEEeeccccChHHHHHHHHHHHHh---------------------------CCCeEEEEEeCchHHHHHH
Confidence 012233899999999999999999999998773 6899999999999888899
Q ss_pred HHHHHcCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCC---CCCCCchHHHHHHhcCCcEEEecccccccccccCCc
Q 011969 334 EKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSS---SGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKN 409 (474)
Q Consensus 334 ~~~~~l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s---~~e~~p~kv~Eama~G~PVia~~~~~~~e~v~~~~~ 409 (474)
+.++++++ ++|.|.|. ++.+++..+|+.||++++|...+ ..|++|++++|||+||+|||+++.++..|++.++.+
T Consensus 236 ~~~~~~~~~~~v~~~g~-~~~~~l~~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~~~e~i~~~~~ 314 (367)
T cd05844 236 ALARALGLGGRVTFLGA-QPHAEVRELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVEDGET 314 (367)
T ss_pred HHHHHcCCCCeEEECCC-CCHHHHHHHHHhCCEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCCchhheecCCe
Confidence 99999888 79999998 99999999999999999963322 258999999999999999999999999999999999
Q ss_pred EEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc-cccchHHHHHH
Q 011969 410 GLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARWATEWEE 459 (474)
Q Consensus 410 G~l~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~~~ 459 (474)
|++++ |+++++++|.+++++ ++.++++++++++.+ +.++|+..-++
T Consensus 315 g~~~~~~d~~~l~~~i~~l~~~----~~~~~~~~~~a~~~~~~~~s~~~~~~~ 363 (367)
T cd05844 315 GLLVPEGDVAALAAALGRLLAD----PDLRARMGAAGRRRVEERFDLRRQTAK 363 (367)
T ss_pred eEEECCCCHHHHHHHHHHHHcC----HHHHHHHHHHHHHHHHHHCCHHHHHHH
Confidence 99996 799999999999984 888999999998865 56777765444
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-31 Score=285.91 Aligned_cols=373 Identities=15% Similarity=0.115 Sum_probs=244.4
Q ss_pred CCCCchH-HHHHHHHHhhCCCeEEEEecCCCCCCcc------------------eeccCCeEEEEeecCCCCCCCCCchh
Q 011969 15 LGRSPRM-QYQALSLARQMSLEVDVVAYGGSKPHAA------------------ILEHPSIHIHTMTQWPTIPRGLPKVL 75 (474)
Q Consensus 15 ~g~~~r~-~~~a~~l~~~~g~eV~Vv~~~~~~~~~~------------------~~~~~gi~i~~~~~~~~~~~~~~~~~ 75 (474)
.||...+ ...+.+|+++ ||+|+|+++........ ....+|++++.+.......+ ..+.
T Consensus 16 ~GGl~~~v~~L~~~L~~~-G~~V~v~~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~v~~~~~~~~--~~~y 92 (466)
T PRK00654 16 TGGLGDVVGALPKALAAL-GHDVRVLLPGYPAIREKLRDAQVVGRLDLFTVLFGHLEGDGVPVYLIDAPHLFDR--PSGY 92 (466)
T ss_pred cCcHHHHHHHHHHHHHHC-CCcEEEEecCCcchhhhhcCceEEEEeeeEEEEEEeEEcCCceEEEEeCHHHcCC--CCCC
Confidence 3444443 3456777775 99999999663321100 01236899888873211000 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCCCEEEEeCCCChhHHHHHHHHHhh-----CCCcEEEEecCchhhhhh-----hc
Q 011969 76 KPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSL-----RRSAFIVDWHNFGYTLLS-----LS 145 (474)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~~~~~~~~~~~~~~~~~-----~~~~~i~~~h~~~~~~~~-----~~ 145 (474)
.......++.......+..+.....+||+||+|. ..+.+++.+++.. .++|+|+++|+..+.-.. ..
T Consensus 93 ~~~d~~~r~~~f~~~~~~~~~~~~~~pDiiH~h~---w~~~~~~~~l~~~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~ 169 (466)
T PRK00654 93 GYPDNGERFAFFSWAAAEFAEGLDPRPDIVHAHD---WHTGLIPALLKEKYWRGYPDIKTVFTIHNLAYQGLFPAEILGE 169 (466)
T ss_pred CCcChHHHHHHHHHHHHHHHHhcCCCCceEEECC---cHHHHHHHHHHHhhhccCCCCCEEEEcCCCcCCCcCCHHHHHH
Confidence 0000111111000001111111125899999998 4444455555533 378999999998531100 00
Q ss_pred cCCC-ch--HHHH--H--HHHHHHHhhhcCEEEEeCHHHHHHHHHH-h-----------CCceEEEeCCCC-CCCCCCCh
Q 011969 146 LGRR-SH--FVSI--Y--RWIEKYYGKMANGCLCVTQAMQHELAQN-W-----------GIKATVLYDQPP-EFFHPTSL 205 (474)
Q Consensus 146 ~~~~-~~--~~~~--~--~~~e~~~~~~ad~vi~vS~~~~~~l~~~-~-----------~~~~~vi~n~~~-~~f~~~~~ 205 (474)
.+.. .. ...+ + ..+.+...+.||.++++|+.+++++.+. + ..++.+|+||.+ +.|.|...
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS~~~~~ei~~~~~~~gl~~~~~~~~~ki~vI~NGid~~~~~p~~~ 249 (466)
T PRK00654 170 LGLPAEAFHLEGLEFYGQISFLKAGLYYADRVTTVSPTYAREITTPEFGYGLEGLLRARSGKLSGILNGIDYDIWNPETD 249 (466)
T ss_pred cCCChHHcCchhhhcCCcccHHHHHHHhcCcCeeeCHHHHHHhccccCCcChHHHHHhcccCceEecCCCCccccCCccC
Confidence 0000 00 0000 0 1234556789999999999999888642 1 235899999944 66766422
Q ss_pred ----------------HHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhcccccccccCC-CCCeEEEEEeec
Q 011969 206 ----------------EEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKP-NRPALVVSSTSW 268 (474)
Q Consensus 206 ----------------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~G~l 268 (474)
..+..+++++| +++ +.+ +++++||+
T Consensus 250 ~~~~~~~~~~~~~~k~~~k~~l~~~~g-------------------------------------l~~~~~~-~i~~vGRl 291 (466)
T PRK00654 250 PLLAANYSADDLEGKAENKRALQERFG-------------------------------------LPDDDAP-LFAMVSRL 291 (466)
T ss_pred cccccccChhhhhchHHHHHHHHHHhC-------------------------------------CCCCCCc-EEEEeecc
Confidence 12334555555 222 344 89999999
Q ss_pred ccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCC--hHHHHHHHHHcCCCcEEE
Q 011969 269 TPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD--KESYEEKIRRLRLKRVAF 346 (474)
Q Consensus 269 ~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~--~~~~~~~~~~l~l~~V~f 346 (474)
.+.||++.|++|++.+.+ ++++|+|+|+|+. .+++++.+++++. ++.+
T Consensus 292 ~~~KG~~~li~a~~~l~~-----------------------------~~~~lvivG~g~~~~~~~l~~l~~~~~~-~v~~ 341 (466)
T PRK00654 292 TEQKGLDLVLEALPELLE-----------------------------QGGQLVLLGTGDPELEEAFRALAARYPG-KVGV 341 (466)
T ss_pred ccccChHHHHHHHHHHHh-----------------------------cCCEEEEEecCcHHHHHHHHHHHHHCCC-cEEE
Confidence 999999999999998865 3689999999864 3678888888864 5666
Q ss_pred ecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecccccccccccC------CcEEEeC--CHHH
Q 011969 347 RTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVD------KNGLLFS--SSSE 418 (474)
Q Consensus 347 ~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~~~~e~v~~~------~~G~l~~--~~~~ 418 (474)
.+. .+.+.++.+|+.||++|+ ||..|+||++++|||+||+|+|+++.+|+.|+|.++ .+|++++ |+++
T Consensus 342 ~~g-~~~~~~~~~~~~aDv~v~---PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv~~~d~~~ 417 (466)
T PRK00654 342 QIG-YDEALAHRIYAGADMFLM---PSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGEATGFVFDDFNAED 417 (466)
T ss_pred EEe-CCHHHHHHHHhhCCEEEe---CCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCCCceEEeCCCCHHH
Confidence 555 356667899999999999 788999999999999999999999999999999888 8999996 7999
Q ss_pred HHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHh
Q 011969 419 LADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEVI 469 (474)
Q Consensus 419 la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 469 (474)
|+++|..+++.+. +++.+++|++++.+ +.++|+...+++ ..+++++.
T Consensus 418 la~~i~~~l~~~~-~~~~~~~~~~~~~~--~~fsw~~~a~~~-~~lY~~~~ 464 (466)
T PRK00654 418 LLRALRRALELYR-QPPLWRALQRQAMA--QDFSWDKSAEEY-LELYRRLL 464 (466)
T ss_pred HHHHHHHHHHHhc-CHHHHHHHHHHHhc--cCCChHHHHHHH-HHHHHHHh
Confidence 9999999887432 46668888888864 478898877664 44555554
|
|
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-32 Score=273.51 Aligned_cols=331 Identities=20% Similarity=0.203 Sum_probs=238.1
Q ss_pred CCCCCCchHHH-HHHHHHhhCCCeEEEEecCCCCCCcceeccCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHHHH
Q 011969 13 GDLGRSPRMQY-QALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFML 91 (474)
Q Consensus 13 ~~~g~~~r~~~-~a~~l~~~~g~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (474)
-+.||.+++.. .+..|+++ ||+|.+++..+.. .......+++++.++ ..... ....+.. ...
T Consensus 7 ~~~gG~e~~~~~l~~~L~~~-g~~v~v~~~~~~~--~~~~~~~~~~~~~~~--~~~~~----~~~~~~~----~~~---- 69 (355)
T cd03819 7 LESGGVERGTLELARALVER-GHRSLVASAGGRL--VAELEAEGSRHIKLP--FISKN----PLRILLN----VAR---- 69 (355)
T ss_pred hccCcHHHHHHHHHHHHHHc-CCEEEEEcCCCch--HHHHHhcCCeEEEcc--ccccc----hhhhHHH----HHH----
Confidence 33577777665 46777775 9999999865432 233445578877776 21111 1111111 111
Q ss_pred HHHHhhhcCCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhhhcCEEE
Q 011969 92 LWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCL 171 (474)
Q Consensus 92 ~~~~~~~~~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi 171 (474)
+...+. ..+||+||++++.. .. .+.++.+..++|+++++|+..... . ..+.+.+.+|.++
T Consensus 70 l~~~~~-~~~~dii~~~~~~~--~~-~~~~~~~~~~~~~i~~~h~~~~~~--------~--------~~~~~~~~~~~vi 129 (355)
T cd03819 70 LRRLIR-EEKVDIVHARSRAP--AW-SAYLAARRTRPPFVTTVHGFYSVN--------F--------RYNAIMARGDRVI 129 (355)
T ss_pred HHHHHH-HcCCCEEEECCCch--hH-HHHHHHHhcCCCEEEEeCCchhhH--------H--------HHHHHHHhcCEEE
Confidence 111222 27899999998532 22 344555667899999999883210 0 2234456899999
Q ss_pred EeCHHHHHHHHHHhCC---ceEEEeCCCC-CCCCCCCh--HHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhh
Q 011969 172 CVTQAMQHELAQNWGI---KATVLYDQPP-EFFHPTSL--EEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFT 245 (474)
Q Consensus 172 ~vS~~~~~~l~~~~~~---~~~vi~n~~~-~~f~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (474)
++|+.+++.+.+.++. ++.+++|+.+ +.|.+... .....++.+++
T Consensus 130 ~~s~~~~~~~~~~~~~~~~k~~~i~ngi~~~~~~~~~~~~~~~~~~~~~~~----------------------------- 180 (355)
T cd03819 130 AVSNFIADHIRENYGVDPDRIRVIPRGVDLDRFDPGAVPPERILALAREWP----------------------------- 180 (355)
T ss_pred EeCHHHHHHHHHhcCCChhhEEEecCCccccccCccccchHHHHHHHHHcC-----------------------------
Confidence 9999999999876765 3789999844 45544321 11111333332
Q ss_pred cccccccccCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeC
Q 011969 246 SLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGK 325 (474)
Q Consensus 246 ~~~~~~~~~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~ 325 (474)
. ++...+++|+|++.+.||++.+++++..+.++ .++++++|+|.
T Consensus 181 --------~-~~~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~---------------------------~~~~~l~ivG~ 224 (355)
T cd03819 181 --------L-PKGKPVILLPGRLTRWKGQEVFIEALARLKKD---------------------------DPDVHLLIVGD 224 (355)
T ss_pred --------C-CCCceEEEEeeccccccCHHHHHHHHHHHHhc---------------------------CCCeEEEEEEC
Confidence 1 22334899999999999999999999998772 57899999999
Q ss_pred CCChHHH----HHHHHHcCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCC-CCCCCchHHHHHHhcCCcEEEecccc
Q 011969 326 GPDKESY----EEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSS-SGLDLPMKVVDMFGCGLPVCAVSYSC 399 (474)
Q Consensus 326 g~~~~~~----~~~~~~l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s-~~e~~p~kv~Eama~G~PVia~~~~~ 399 (474)
++..+.+ .+.++++++ ++|.|.|. .+++..+|+.||++++ +| ..|++|++++||||||+|||+++.++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~v~~~g~---~~~~~~~l~~ad~~i~---ps~~~e~~~~~l~EA~a~G~PvI~~~~~~ 298 (355)
T cd03819 225 AQGRRFYYAELLELIKRLGLQDRVTFVGH---CSDMPAAYALADIVVS---ASTEPEAFGRTAVEAQAMGRPVIASDHGG 298 (355)
T ss_pred CcccchHHHHHHHHHHHcCCcceEEEcCC---cccHHHHHHhCCEEEe---cCCCCCCCchHHHHHHhcCCCEEEcCCCC
Confidence 8765433 456677787 68999998 8899999999999999 56 78999999999999999999999999
Q ss_pred cccccccCCcEEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc-cccchH
Q 011969 400 IEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARWA 454 (474)
Q Consensus 400 ~~e~v~~~~~G~l~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~ 454 (474)
..|++.++.+|++++ |+++++++|..++.. +++.++++++++++.+ ..++|+
T Consensus 299 ~~e~i~~~~~g~~~~~~~~~~l~~~i~~~~~~---~~~~~~~~~~~a~~~~~~~f~~~ 353 (355)
T cd03819 299 ARETVRPGETGLLVPPGDAEALAQALDQILSL---LPEGRAKMFAKARMCVETLFSYD 353 (355)
T ss_pred cHHHHhCCCceEEeCCCCHHHHHHHHHHHHhh---CHHHHHHHHHHHHHHHHHhhhhc
Confidence 999999999999985 799999999776664 6889999999999866 455554
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. |
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-31 Score=301.84 Aligned_cols=307 Identities=17% Similarity=0.179 Sum_probs=222.1
Q ss_pred CCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhh--ccCC------CchHH-HHHHHHHHHHhhhcCEEE
Q 011969 101 SPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSL--SLGR------RSHFV-SIYRWIEKYYGKMANGCL 171 (474)
Q Consensus 101 ~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~--~~~~------~~~~~-~~~~~~e~~~~~~ad~vi 171 (474)
.||+||.|. ..+..++..++...++|+|+|.|..+-..... .-+. ...+. ......|+...+.||.||
T Consensus 310 ~pDvIHaHy---w~sG~aa~~L~~~lgVP~V~T~HSLgr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VI 386 (1050)
T TIGR02468 310 WPYVIHGHY---ADAGDSAALLSGALNVPMVLTGHSLGRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVI 386 (1050)
T ss_pred CCCEEEECc---chHHHHHHHHHHhhCCCEEEECccchhhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEEE
Confidence 499999997 56666788888899999999999885322110 0010 00011 111246889999999999
Q ss_pred EeCHHHHHHHHHHhC-------------------------CceEEEeCCC-CCCCCCCChHHHHHHHHhhhhccCCCCCc
Q 011969 172 CVTQAMQHELAQNWG-------------------------IKATVLYDQP-PEFFHPTSLEEKHELFCRLNKILHQPLGV 225 (474)
Q Consensus 172 ~vS~~~~~~l~~~~~-------------------------~~~~vi~n~~-~~~f~~~~~~~~~~~~~~l~~~~~~~~~~ 225 (474)
|+|...++++...|+ .++.|||+|. .+.|.|....... ..++.
T Consensus 387 asT~qE~~eq~~lY~~~~~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~---~~~~~-------- 455 (1050)
T TIGR02468 387 TSTRQEIEEQWGLYDGFDVILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDG---ETEGN-------- 455 (1050)
T ss_pred EeCHHHHHHHHHHhccCCchhhhhhhhhhcccccccccCCCCeEEeCCCCcHHHccCCCccccc---hhccc--------
Confidence 999999987766553 1579999994 4778775321110 00000
Q ss_pred cccccccccCCcCcchhhhhcccccccccCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHh
Q 011969 226 QDCVSNAGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLK 305 (474)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~ 305 (474)
.+ .+...++.+.... ......++.| +|+++|++.+.||++.||+|+..+.+.
T Consensus 456 ~~-------~~~~~~~~~~~~l--~r~~~~pdkp-vIL~VGRL~p~KGi~~LIeAf~~L~~l------------------ 507 (1050)
T TIGR02468 456 EE-------HPAKPDPPIWSEI--MRFFTNPRKP-MILALARPDPKKNITTLVKAFGECRPL------------------ 507 (1050)
T ss_pred cc-------ccccccchhhHHH--HhhcccCCCc-EEEEEcCCccccCHHHHHHHHHHhHhh------------------
Confidence 00 0000000000000 0001234555 899999999999999999999988641
Q ss_pred hhcCCccccCCCEEEEEEeCCCCh-----------HHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcc----cEEEee
Q 011969 306 EISDGKQYLYPRLLFIITGKGPDK-----------ESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSA----DLGVCL 369 (474)
Q Consensus 306 ~~~~~~~~~~~~~~l~ivG~g~~~-----------~~~~~~~~~l~l-~~V~f~g~~v~~~~~~~~l~~a----dv~v~~ 369 (474)
...+++. +|+|+|++. .++++.++++++ ++|.|.|. ++.++++.+|+.| |+||+
T Consensus 508 -------~~~~nL~-LIiG~gdd~d~l~~~~~~~l~~L~~li~~lgL~g~V~FlG~-v~~edvp~lYr~Ad~s~DVFV~- 577 (1050)
T TIGR02468 508 -------RELANLT-LIMGNRDDIDEMSSGSSSVLTSVLKLIDKYDLYGQVAYPKH-HKQSDVPDIYRLAAKTKGVFIN- 577 (1050)
T ss_pred -------ccCCCEE-EEEecCchhhhhhccchHHHHHHHHHHHHhCCCCeEEecCC-CCHHHHHHHHHHhhhcCCeeeC-
Confidence 0124666 467876542 356778899999 79999998 9999999999988 69999
Q ss_pred ccCCCCCCCchHHHHHHhcCCcEEEecccccccccccCCcEEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHh
Q 011969 370 HTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEM 447 (474)
Q Consensus 370 ~~~s~~e~~p~kv~Eama~G~PVia~~~~~~~e~v~~~~~G~l~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~ 447 (474)
||..|+||++++||||||+|||+|+.+++.|++.++.+|++++ |+++|+++|..++++ ++.+++|++++++.
T Consensus 578 --PS~~EgFGLvlLEAMAcGlPVVASdvGG~~EII~~g~nGlLVdP~D~eaLA~AL~~LL~D----pelr~~m~~~gr~~ 651 (1050)
T TIGR02468 578 --PAFIEPFGLTLIEAAAHGLPMVATKNGGPVDIHRVLDNGLLVDPHDQQAIADALLKLVAD----KQLWAECRQNGLKN 651 (1050)
T ss_pred --CcccCCCCHHHHHHHHhCCCEEEeCCCCcHHHhccCCcEEEECCCCHHHHHHHHHHHhhC----HHHHHHHHHHHHHH
Confidence 7899999999999999999999999999999999999999996 799999999999984 89999999999988
Q ss_pred ccccchHHHHHHHHHHHH
Q 011969 448 GLSARWATEWEEHAKPLI 465 (474)
Q Consensus 448 ~~~~~w~~~~~~~~~~~~ 465 (474)
+.+|+|+...+++++.+.
T Consensus 652 v~~FSWe~ia~~yl~~i~ 669 (1050)
T TIGR02468 652 IHLFSWPEHCKTYLSRIA 669 (1050)
T ss_pred HHHCCHHHHHHHHHHHHH
Confidence 777888877766654443
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-31 Score=268.23 Aligned_cols=348 Identities=14% Similarity=0.124 Sum_probs=242.6
Q ss_pred EEEEEeC----CCCCCchHH-HHHHHHHhhCCCeEEEEecCCCCCCcceeccCCeEEEEeecCCCCCCCCCchhHHHHHH
Q 011969 7 ACVVVLG----DLGRSPRMQ-YQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLL 81 (474)
Q Consensus 7 ~~i~~~~----~~g~~~r~~-~~a~~l~~~~g~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~~ 81 (474)
++|+... ..||..+.. ..+..|.++ ||+|+|++....... ......|+++++++... ..... .....+
T Consensus 2 i~~i~~~~~~~~~gG~~~~~~~la~~L~~~-g~~v~v~~~~~~~~~-~~~~~~~i~~~~~~~~~--~~~~~---~~~~~~ 74 (363)
T cd04955 2 IAIIGTRGIPAKYGGFETFVEELAPRLVAR-GHEVTVYCRSPYPKQ-KETEYNGVRLIHIPAPE--IGGLG---TIIYDI 74 (363)
T ss_pred eEEEecCcCCcccCcHHHHHHHHHHHHHhc-CCCEEEEEccCCCCC-cccccCCceEEEcCCCC--ccchh---hhHHHH
Confidence 4555442 346655544 456777775 999999997654332 13445689998887211 11111 111111
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHH
Q 011969 82 LKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEK 161 (474)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~ 161 (474)
. .++....+..++|++|...+.. ..+..++ +..+.|++++.|+..+.. .........++++.++
T Consensus 75 -~-------~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~-~~~~~~~v~~~h~~~~~~----~~~~~~~~~~~~~~~~ 138 (363)
T cd04955 75 -L-------AILHALFVKRDIDHVHALGPAI---APFLPLL-RLKGKKVVVNMDGLEWKR----AKWGRPAKRYLKFGEK 138 (363)
T ss_pred -H-------HHHHHHhccCCeEEEEecCccH---HHHHHHH-HhcCCCEEEEccCcceee----cccccchhHHHHHHHH
Confidence 0 1112221235666666665432 2223333 344889999999874311 1122333556778888
Q ss_pred HHhhhcCEEEEeCHHHHHHHHHHhCCceEEEeCCCCC-CCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcc
Q 011969 162 YYGKMANGCLCVTQAMQHELAQNWGIKATVLYDQPPE-FFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKAD 240 (474)
Q Consensus 162 ~~~~~ad~vi~vS~~~~~~l~~~~~~~~~vi~n~~~~-~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (474)
...+.||.++++|+.+++.+.+.++.+..+++|+.+. .+.+ ....+..++
T Consensus 139 ~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~ngv~~~~~~~-----~~~~~~~~~------------------------ 189 (363)
T cd04955 139 LAVKFADRLIADSPGIKEYLKEKYGRDSTYIPYGADHVVSSE-----EDEILKKYG------------------------ 189 (363)
T ss_pred HHHhhccEEEeCCHHHHHHHHHhcCCCCeeeCCCcChhhcch-----hhhhHHhcC------------------------
Confidence 9999999999999999999988788777899998542 2222 111122222
Q ss_pred hhhhhcccccccccCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEE
Q 011969 241 ETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLF 320 (474)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 320 (474)
. .+.+ .++|+|++.+.||++.+++|++.+. ++++|
T Consensus 190 -------------~-~~~~-~i~~~G~~~~~Kg~~~li~a~~~l~------------------------------~~~~l 224 (363)
T cd04955 190 -------------L-EPGR-YYLLVGRIVPENNIDDLIEAFSKSN------------------------------SGKKL 224 (363)
T ss_pred -------------C-CCCc-EEEEEecccccCCHHHHHHHHHhhc------------------------------cCceE
Confidence 1 1223 5789999999999999999998762 36899
Q ss_pred EEEeCCCChHHHHHHHH-HcCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCCC-CCCchHHHHHHhcCCcEEEecc
Q 011969 321 IITGKGPDKESYEEKIR-RLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSG-LDLPMKVVDMFGCGLPVCAVSY 397 (474)
Q Consensus 321 ~ivG~g~~~~~~~~~~~-~l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~-e~~p~kv~Eama~G~PVia~~~ 397 (474)
+|+|+|+....+.+.++ +++. ++|.|+|. ++.+++..+|..||++++ ++.. |++|++++|||+||+|||+++.
T Consensus 225 ~ivG~~~~~~~~~~~~~~~~~~~~~V~~~g~-~~~~~~~~~~~~ad~~v~---ps~~~e~~~~~~~EAma~G~PvI~s~~ 300 (363)
T cd04955 225 VIVGNADHNTPYGKLLKEKAAADPRIIFVGP-IYDQELLELLRYAALFYL---HGHSVGGTNPSLLEAMAYGCPVLASDN 300 (363)
T ss_pred EEEcCCCCcchHHHHHHHHhCCCCcEEEccc-cChHHHHHHHHhCCEEEe---CCccCCCCChHHHHHHHcCCCEEEecC
Confidence 99999977666766665 5666 79999998 999999999999999999 4655 9999999999999999999999
Q ss_pred cccccccccCCcEEEeCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhcc-ccchHHHHHHHH
Q 011969 398 SCIEELVKVDKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGL-SARWATEWEEHA 461 (474)
Q Consensus 398 ~~~~e~v~~~~~G~l~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~w~~~~~~~~ 461 (474)
++..|++.+ +|.++++.+.++++|..++++ ++.+.++++++++... .++|+..-++..
T Consensus 301 ~~~~e~~~~--~g~~~~~~~~l~~~i~~l~~~----~~~~~~~~~~~~~~~~~~fs~~~~~~~~~ 359 (363)
T cd04955 301 PFNREVLGD--KAIYFKVGDDLASLLEELEAD----PEEVSAMAKAARERIREKYTWEKIADQYE 359 (363)
T ss_pred CccceeecC--CeeEecCchHHHHHHHHHHhC----HHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 999999865 788887655599999999985 7888999999988763 478777555533
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-31 Score=267.27 Aligned_cols=342 Identities=19% Similarity=0.248 Sum_probs=241.3
Q ss_pred CchHHHHHHHHHhhCCCeEEEEecCCCCCCcceeccCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhh
Q 011969 18 SPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCV 97 (474)
Q Consensus 18 ~~r~~~~a~~l~~~~g~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (474)
..++...+..|+++ ||+|++++........... ..+.+..... ...............+.+. +
T Consensus 17 ~~~~~~l~~~L~~~-g~~v~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-----------~- 79 (364)
T cd03814 17 VRTLQRLVEHLRAR-GHEVLVIAPGPFRESEGPA--RVVPVPSVPL--PGYPEIRLALPPRRRVRRL-----------L- 79 (364)
T ss_pred ehHHHHHHHHHHHC-CCEEEEEeCCchhhccCCC--Cceeeccccc--CcccceEecccchhhHHHH-----------H-
Confidence 44566777888886 9999999977543221111 2233322220 0001111111111111111 1
Q ss_pred hcCCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhhhcCEEEEeCHHH
Q 011969 98 KIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAM 177 (474)
Q Consensus 98 ~~~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~ 177 (474)
+..+||+||++.+.... ..+..+++..++|+++++|+....... .............+++.+.+.+|.++++|+.+
T Consensus 80 ~~~~pdii~~~~~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~ 155 (364)
T cd03814 80 DAFAPDVVHIATPGPLG--LAALRAARRLGIPVVTSYHTDFPEYLR--YYGLGPLSWLAWAYLRWFHNRADRVLVPSPSL 155 (364)
T ss_pred HhcCCCEEEEeccchhh--HHHHHHHHHcCCCEEEEEecChHHHhh--hcccchHhHhhHHHHHHHHHhCCEEEeCCHHH
Confidence 23789999999754332 234555667889999999987432221 11223334444677788889999999999999
Q ss_pred HHHHHHHhCCceEEEeCCCC-CCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhcccccccccCC
Q 011969 178 QHELAQNWGIKATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKP 256 (474)
Q Consensus 178 ~~~l~~~~~~~~~vi~n~~~-~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (474)
++.+.+....++.+++++.+ +.|.+.... ...+.+++ .
T Consensus 156 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~---------------------------------------~ 194 (364)
T cd03814 156 ADELRARGFRRVRLWPRGVDTELFHPRRRD--EALRARLG---------------------------------------P 194 (364)
T ss_pred HHHHhccCCCceeecCCCccccccCccccc--HHHHHHhC---------------------------------------C
Confidence 98666543445888888844 555544211 11111111 2
Q ss_pred CCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCChHHHHHHH
Q 011969 257 NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKI 336 (474)
Q Consensus 257 ~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~ 336 (474)
+.+..++|+|++.+.||++.++++++.+.+ . ++++|+|+|+|++.+.++
T Consensus 195 ~~~~~i~~~G~~~~~k~~~~~i~~~~~l~~---------------------------~-~~~~l~i~G~~~~~~~~~--- 243 (364)
T cd03814 195 PDRPVLLYVGRLAPEKNLEALLDADLPLRR---------------------------R-PPVRLVIVGDGPARARLE--- 243 (364)
T ss_pred CCCeEEEEEeccccccCHHHHHHHHHHhhh---------------------------c-CCceEEEEeCCchHHHHh---
Confidence 233489999999999999999999999866 3 789999999998766554
Q ss_pred HHcCCCcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecccccccccccCCcEEEeC--
Q 011969 337 RRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFS-- 414 (474)
Q Consensus 337 ~~l~l~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~~~~e~v~~~~~G~l~~-- 414 (474)
...++|.|.|. ++.+++..+|+.||++++ ++..|++|++++||||||+|||+++.++..|++.++++|++++
T Consensus 244 --~~~~~v~~~g~-~~~~~~~~~~~~~d~~l~---~s~~e~~~~~~lEa~a~g~PvI~~~~~~~~~~i~~~~~g~~~~~~ 317 (364)
T cd03814 244 --ARYPNVHFLGF-LDGEELAAAYASADVFVF---PSRTETFGLVVLEAMASGLPVVAPDAGGPADIVTDGENGLLVEPG 317 (364)
T ss_pred --ccCCcEEEEec-cCHHHHHHHHHhCCEEEE---CcccccCCcHHHHHHHcCCCEEEcCCCCchhhhcCCcceEEcCCC
Confidence 11268999998 999999999999999999 6777899999999999999999999999999999999999986
Q ss_pred CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHHH
Q 011969 415 SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAK 462 (474)
Q Consensus 415 ~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~ 462 (474)
+.++++++|..++++ ++.++++++++.+.+.+++|+...+++.+
T Consensus 318 ~~~~l~~~i~~l~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (364)
T cd03814 318 DAEAFAAALAALLAD----PELRRRMAARARAEAERRSWEAFLDNLLE 361 (364)
T ss_pred CHHHHHHHHHHHHcC----HHHHHHHHHHHHHHHhhcCHHHHHHHHHH
Confidence 588899999999984 88999999999998778888877766543
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-31 Score=262.35 Aligned_cols=345 Identities=20% Similarity=0.227 Sum_probs=245.6
Q ss_pred EEEEEeCCCCCCchHHHHHHHHHhhCCCeEEEEecCCCCCCcceeccCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHH
Q 011969 7 ACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLI 86 (474)
Q Consensus 7 ~~i~~~~~~g~~~r~~~~a~~l~~~~g~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (474)
++++.....|....+...+..|.++ ||+|++++....... .....+++++.++.... ... ....+.....+
T Consensus 2 Il~i~~~~~g~~~~~~~l~~~L~~~-g~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~-- 72 (359)
T cd03808 2 ILHIVTVDGGLYSFRLPLIKALRAA-GYEVHVVAPPGDELE--ELEALGVKVIPIPLDRR---GIN-PFKDLKALLRL-- 72 (359)
T ss_pred eeEEEecchhHHHHHHHHHHHHHhc-CCeeEEEecCCCccc--ccccCCceEEecccccc---ccC-hHhHHHHHHHH--
Confidence 3444444334445566677888776 999999997755432 34566888888872111 111 11111111111
Q ss_pred HHHHHHHHHhhhcCCCCEEEEeCCCChhHHHHHHHHHh-hCCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhh
Q 011969 87 QFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASS-LRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGK 165 (474)
Q Consensus 87 ~~~~~~~~~~~~~~~~Dvi~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 165 (474)
. ..+ +..+||+||++... +.. ...+.++ ..+.+++++.|+.++.. .........+..+++...+
T Consensus 73 -----~-~~~-~~~~~dvv~~~~~~--~~~-~~~~~~~~~~~~~~i~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 137 (359)
T cd03808 73 -----Y-RLL-RKERPDIVHTHTPK--PGI-LGRLAARLAGVPKVIYTVHGLGFVF-----TSGGLKRRLYLLLERLALR 137 (359)
T ss_pred -----H-HHH-HhcCCCEEEEcccc--chh-HHHHHHHHcCCCCEEEEecCcchhh-----ccchhHHHHHHHHHHHHHh
Confidence 0 111 23789999998742 222 3444444 56677888899875321 1112244566788899999
Q ss_pred hcCEEEEeCHHHHHHHHHHhCC----ceEEEeCCCC-CCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcc
Q 011969 166 MANGCLCVTQAMQHELAQNWGI----KATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKAD 240 (474)
Q Consensus 166 ~ad~vi~vS~~~~~~l~~~~~~----~~~vi~n~~~-~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (474)
.+|.++++|+.+++.+.+.... .+.+.+++.+ +.+.+....
T Consensus 138 ~~d~ii~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------------- 183 (359)
T cd03808 138 FTDKVIFQNEDDRDLALKLGIIKKKKTVLIPGSGVDLDRFSPSPEP---------------------------------- 183 (359)
T ss_pred hccEEEEcCHHHHHHHHHhcCCCcCceEEecCCCCChhhcCccccc----------------------------------
Confidence 9999999999999998886543 2444444433 222221100
Q ss_pred hhhhhcccccccccCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEE
Q 011969 241 ETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLF 320 (474)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 320 (474)
..+++..++|+|++.+.||++.+++++..+.++ .++++|
T Consensus 184 --------------~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~~~---------------------------~~~~~l 222 (359)
T cd03808 184 --------------IPEDDPVFLFVARLLKDKGIDELLEAARILKAK---------------------------GPNVRL 222 (359)
T ss_pred --------------cCCCCcEEEEEeccccccCHHHHHHHHHHHHhc---------------------------CCCeEE
Confidence 023345999999999999999999999998762 688999
Q ss_pred EEEeCCCChHHHHHH-HHHcCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEeccc
Q 011969 321 IITGKGPDKESYEEK-IRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS 398 (474)
Q Consensus 321 ~ivG~g~~~~~~~~~-~~~l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~ 398 (474)
+|+|.++........ +.+++. ++|.|.|. .+++..+|+.||++++ ++..|++|++++|||+||+|||+++.+
T Consensus 223 ~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~---~~~~~~~~~~adi~i~---ps~~e~~~~~~~Ea~~~G~Pvi~s~~~ 296 (359)
T cd03808 223 LLVGDGDEENPAAILEIEKLGLEGRVEFLGF---RDDVPELLAAADVFVL---PSYREGLPRVLLEAMAMGRPVIATDVP 296 (359)
T ss_pred EEEcCCCcchhhHHHHHHhcCCcceEEEeec---cccHHHHHHhccEEEe---cCcccCcchHHHHHHHcCCCEEEecCC
Confidence 999999876655543 566666 69999997 7899999999999999 577799999999999999999999999
Q ss_pred ccccccccCCcEEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHh-ccccchHHHHHHH
Q 011969 399 CIEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEM-GLSARWATEWEEH 460 (474)
Q Consensus 399 ~~~e~v~~~~~G~l~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~w~~~~~~~ 460 (474)
+..+++.++.+|++++ |+++++++|..++++ ++.++++++++++. .+.++|+...++.
T Consensus 297 ~~~~~i~~~~~g~~~~~~~~~~~~~~i~~l~~~----~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 357 (359)
T cd03808 297 GCREAVIDGVNGFLVPPGDAEALADAIERLIED----PELRARMGQAARKRAEEEFDEEIVVKKL 357 (359)
T ss_pred CchhhhhcCcceEEECCCCHHHHHHHHHHHHhC----HHHHHHHHHHHHHHHHHhcCHHHHHHHh
Confidence 9999999899999996 699999999999884 88899999999887 5778877665543
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. |
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-31 Score=269.63 Aligned_cols=328 Identities=17% Similarity=0.139 Sum_probs=230.4
Q ss_pred CCCCCchHHH-HHHHHHhhCCCeEEEEecCCCC-CCcceeccCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHHHH
Q 011969 14 DLGRSPRMQY-QALSLARQMSLEVDVVAYGGSK-PHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFML 91 (474)
Q Consensus 14 ~~g~~~r~~~-~a~~l~~~~g~eV~Vv~~~~~~-~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (474)
+.||..+... .+..|.+. ||+|++++..... .........++.++.++ .. .......+..+.+.
T Consensus 10 ~~GG~~~~~~~l~~~L~~~-~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~--~~----~~~~~~~~~~~~~~------- 75 (358)
T cd03812 10 NRGGIETFIMNYYRNLDRS-KIQFDFLVTSKEEGDYDDEIEKLGGKIYYIP--AR----KKNPLKYFKKLYKL------- 75 (358)
T ss_pred CCccHHHHHHHHHHhcCcc-ceEEEEEEeCCCCcchHHHHHHcCCeEEEec--CC----CccHHHHHHHHHHH-------
Confidence 5666666554 45666655 9999999977543 12223334577777755 11 11122222222111
Q ss_pred HHHHhhhcCCCCEEEEeCCCChhHHHHHHHHHhhCCCc-EEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhhhcCEE
Q 011969 92 LWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSA-FIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGC 170 (474)
Q Consensus 92 ~~~~~~~~~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~v 170 (474)
+ +..+||+||++++. ...+...+.+ ..+.+ ++++.|+..+... .........++++.+.+.+|.+
T Consensus 76 ----~-~~~~~Dvv~~~~~~--~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 141 (358)
T cd03812 76 ----I-KKNKYDIVHVHGSS--ASGFILLAAK-KAGVKVRIAHSHNTSDSHD------KKKKILKYKVLRKLINRLATDY 141 (358)
T ss_pred ----H-hcCCCCEEEEeCcc--hhHHHHHHHh-hCCCCeEEEEecccccccc------ccchhhHHHHHHHHHHhcCCEE
Confidence 1 23799999999865 2232333333 34444 5678888742111 1111111146677888899999
Q ss_pred EEeCHHHHHHHHHHh-CCceEEEeCCCC-CCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhccc
Q 011969 171 LCVTQAMQHELAQNW-GIKATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLA 248 (474)
Q Consensus 171 i~vS~~~~~~l~~~~-~~~~~vi~n~~~-~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (474)
+++|+...+.+.+.. ..++.+++|+.+ ..|.+.+.. +.. +...+
T Consensus 142 i~~s~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~-~~~-~~~~~-------------------------------- 187 (358)
T cd03812 142 LACSEEAGKWLFGKVKNKKFKVIPNGIDLEKFIFNEEI-RKK-RRELG-------------------------------- 187 (358)
T ss_pred EEcCHHHHHHHHhCCCcccEEEEeccCcHHHcCCCchh-hhH-HHHcC--------------------------------
Confidence 999999998886642 345899999954 444333211 111 12211
Q ss_pred ccccccCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCC
Q 011969 249 GIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD 328 (474)
Q Consensus 249 ~~~~~~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~ 328 (474)
. .+.+..++|+|++.+.||++.+++|+..+.++ .++++++|+|+|+.
T Consensus 188 -----~-~~~~~~i~~vGr~~~~Kg~~~li~a~~~l~~~---------------------------~~~~~l~ivG~g~~ 234 (358)
T cd03812 188 -----I-LEDKFVIGHVGRFSEQKNHEFLIEIFAELLKK---------------------------NPNAKLLLVGDGEL 234 (358)
T ss_pred -----C-CCCCEEEEEEeccccccChHHHHHHHHHHHHh---------------------------CCCeEEEEEeCCch
Confidence 1 22344899999999999999999999999873 68999999999999
Q ss_pred hHHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecccccccccccC
Q 011969 329 KESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVD 407 (474)
Q Consensus 329 ~~~~~~~~~~l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~~~~e~v~~~ 407 (474)
.+.+++.++++++ ++|.|.|. .+++..+|+.||++|+ ||..|++|++++||||||+|||+++.++..+++.++
T Consensus 235 ~~~~~~~~~~~~~~~~v~~~g~---~~~~~~~~~~adi~v~---ps~~E~~~~~~lEAma~G~PvI~s~~~~~~~~i~~~ 308 (358)
T cd03812 235 EEEIKKKVKELGLEDKVIFLGV---RNDVPELLQAMDVFLF---PSLYEGLPLVLIEAQASGLPCILSDTITKEVDLTDL 308 (358)
T ss_pred HHHHHHHHHhcCCCCcEEEecc---cCCHHHHHHhcCEEEe---cccccCCCHHHHHHHHhCCCEEEEcCCchhhhhccC
Confidence 9999999999988 69999997 7899999999999999 677899999999999999999999999999999884
Q ss_pred CcEEEeC-CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Q 011969 408 KNGLLFS-SSSELADQLLMLFKGFPDDSDVLKKLRNGTLE 446 (474)
Q Consensus 408 ~~G~l~~-~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~ 446 (474)
..++..+ ++++++++|.+++++ ++.++++++.+..
T Consensus 309 ~~~~~~~~~~~~~a~~i~~l~~~----~~~~~~~~~~~~~ 344 (358)
T cd03812 309 VKFLSLDESPEIWAEEILKLKSE----DRRERSSESIKKK 344 (358)
T ss_pred ccEEeCCCCHHHHHHHHHHHHhC----cchhhhhhhhhhc
Confidence 4444444 479999999999995 7777777777765
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). |
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-31 Score=261.18 Aligned_cols=350 Identities=21% Similarity=0.221 Sum_probs=253.0
Q ss_pred eEEEEEeCCCCCCchHHH-HHHHHHhhCCCeEEEEecCCCCCCcceeccCCeEEEEeecCCCCCCCCCchhHHHHHHHHH
Q 011969 6 RACVVVLGDLGRSPRMQY-QALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKP 84 (474)
Q Consensus 6 ~~~i~~~~~~g~~~r~~~-~a~~l~~~~g~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (474)
++.++.....||..++.. .+..|.++ |++|.+++..............+++++.++. ... .........+.+.
T Consensus 2 i~~i~~~~~~gG~~~~~~~l~~~l~~~-~~~v~~~~~~~~~~~~~~~~~~~i~v~~~~~--~~~---~~~~~~~~~~~~~ 75 (365)
T cd03807 2 VLHVITGLDVGGAERMLVRLLKGLDRD-RFEHVVISLTDRGELGEELEEAGVPVYCLGK--RPG---RPDPGALLRLYKL 75 (365)
T ss_pred eEEEEeeccCccHHHHHHHHHHHhhhc-cceEEEEecCcchhhhHHHHhcCCeEEEEec--ccc---cccHHHHHHHHHH
Confidence 455566556688777654 45666675 9999999976543333334456888888872 111 1111122222222
Q ss_pred HHHHHHHHHHHhhhcCCCCEEEEeCCCChhHHHHHHHHHhh-CCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHH
Q 011969 85 LIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSL-RRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYY 163 (474)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~Dvi~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 163 (474)
+ +..+||+||++.+... .......+. .+.+++++.|+..... .........++++.+
T Consensus 76 ~------------~~~~~div~~~~~~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~-------~~~~~~~~~~~~~~~ 133 (365)
T cd03807 76 I------------RRLRPDVVHTWMYHAD---LYGGLAARLAGVPPVIWGIRHSDLDL-------GKKSTRLVARLRRLL 133 (365)
T ss_pred H------------HhhCCCEEEecccccc---HHHHHHHHhcCCCcEEEEecCCcccc-------cchhHhHHHHHHHHh
Confidence 2 2278999999875322 223333444 6889999999984311 123334556778888
Q ss_pred hhhcCEEEEeCHHHHHHHHHHhCC---ceEEEeCCCC-CCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCc
Q 011969 164 GKMANGCLCVTQAMQHELAQNWGI---KATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKA 239 (474)
Q Consensus 164 ~~~ad~vi~vS~~~~~~l~~~~~~---~~~vi~n~~~-~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 239 (474)
.+.+|.++++|+..++.+.+. +. ++.+++|+.+ ..|.+... .....+++++
T Consensus 134 ~~~~~~~i~~s~~~~~~~~~~-~~~~~~~~vi~~~~~~~~~~~~~~-~~~~~~~~~~----------------------- 188 (365)
T cd03807 134 SSFIPLIVANSAAAAEYHQAI-GYPPKKIVVIPNGVDTERFSPDLD-ARARLREELG----------------------- 188 (365)
T ss_pred ccccCeEEeccHHHHHHHHHc-CCChhheeEeCCCcCHHhcCCccc-chHHHHHhcC-----------------------
Confidence 889999999999999888774 43 3788999844 34433321 2222333333
Q ss_pred chhhhhcccccccccCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEE
Q 011969 240 DETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLL 319 (474)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (474)
++ +....++|+|++.+.||++.+++++..+.++ .++++
T Consensus 189 --------------~~-~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~---------------------------~~~~~ 226 (365)
T cd03807 189 --------------LP-EDTFLIGIVARLHPQKDHATLLRAAALLLKK---------------------------FPNAR 226 (365)
T ss_pred --------------CC-CCCeEEEEecccchhcCHHHHHHHHHHHHHh---------------------------CCCeE
Confidence 22 2334889999999999999999999998773 68899
Q ss_pred EEEEeCCCChHHHHHHHH-HcCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecc
Q 011969 320 FIITGKGPDKESYEEKIR-RLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY 397 (474)
Q Consensus 320 l~ivG~g~~~~~~~~~~~-~l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~ 397 (474)
|+|+|.++..+..++... ++++ ++|.|.|. .+++..+|+.||++++ |+..|++|++++|||+||+|||+++.
T Consensus 227 l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~---~~~~~~~~~~adi~v~---ps~~e~~~~~~~Ea~a~g~PvI~~~~ 300 (365)
T cd03807 227 LLLVGDGPDRANLELLALKELGLEDKVILLGE---RSDVPALLNALDVFVL---SSLSEGFPNVLLEAMACGLPVVATDV 300 (365)
T ss_pred EEEecCCcchhHHHHHHHHhcCCCceEEEccc---cccHHHHHHhCCEEEe---CCccccCCcHHHHHHhcCCCEEEcCC
Confidence 999999988887777776 7787 68999987 6889999999999999 67779999999999999999999999
Q ss_pred cccccccccCCcEEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc-cccchHHHHHHHHH
Q 011969 398 SCIEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARWATEWEEHAK 462 (474)
Q Consensus 398 ~~~~e~v~~~~~G~l~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~~~~~~ 462 (474)
++..|++.+ +|++++ |+++++++|..++++ ++.++++++++.+.+ +.++|+...++..+
T Consensus 301 ~~~~e~~~~--~g~~~~~~~~~~l~~~i~~l~~~----~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~ 362 (365)
T cd03807 301 GDNAELVGD--TGFLVPPGDPEALAEAIEALLAD----PALRQALGEAARERIEENFSIEAMVEAYEE 362 (365)
T ss_pred CChHHHhhc--CCEEeCCCCHHHHHHHHHHHHhC----hHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 999999976 888885 799999999999995 788889999998865 45788776655443
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. |
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-31 Score=277.22 Aligned_cols=358 Identities=15% Similarity=0.131 Sum_probs=242.5
Q ss_pred EeCCCC-CCchHHHHHH-HHHhh-CCCeEEEEecCCCCC----------CcceeccCCeEEEEee-c-CCCCCCCCCchh
Q 011969 11 VLGDLG-RSPRMQYQAL-SLARQ-MSLEVDVVAYGGSKP----------HAAILEHPSIHIHTMT-Q-WPTIPRGLPKVL 75 (474)
Q Consensus 11 ~~~~~g-~~~r~~~~a~-~l~~~-~g~eV~Vv~~~~~~~----------~~~~~~~~gi~i~~~~-~-~~~~~~~~~~~~ 75 (474)
...+.| |+.|+.-.|. ++.+. .+++|+|+|.+.... ...+...+++++.++. . .......++++.
T Consensus 8 p~~~~ggg~ervl~~a~~~l~~~~~~~~v~i~t~~~~~~~~~~l~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 87 (419)
T cd03806 8 PYCNAGGGGERVLWCAVRALQKRYPNNIVVIYTGDLDATPEEILEKVESRFNIELDRPRIVFFLLKYRKLVEASTYPRFT 87 (419)
T ss_pred CCCCCCCCchHHHHHHHHHHHHhCCCcEEEEECCCCCCCHHHHHHHHHHhcCeecCCCceEEEEecceeeeccccCCcee
Confidence 334455 8999888764 44443 278999999664432 1233445677766652 1 122233344433
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCch---hhhhhhccC-----
Q 011969 76 KPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFG---YTLLSLSLG----- 147 (474)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~---~~~~~~~~~----- 147 (474)
.....+...+. .+....+ .+|||++.+.+...... +. +.+.+.|+|+.+|-.. ........+
T Consensus 88 ~~~~~~~~~~~-----~~~~~~~-~~pDv~i~~~g~~~~~~-~~---~~~~~~~~i~y~h~P~~~~d~l~~~~~~~~~~~ 157 (419)
T cd03806 88 LLGQALGSMIL-----GLEALLK-LVPDIFIDTMGYPFTYP-LV---RLLGGCPVGAYVHYPTISTDMLQKVRSREASYN 157 (419)
T ss_pred eHHHHHHHHHH-----HHHHHHh-cCCCEEEEcCCcccHHH-HH---HHhcCCeEEEEecCCcchHHHHHHHhhcccccc
Confidence 22222222211 1122212 57999988874333222 22 2334789999999221 111111111
Q ss_pred ------CCc---hHH----HHHHHHHHHHhhhcCEEEEeCHHHHHHHHHHhCC--ceEEEeCCCC-CCCCCCChHHHHHH
Q 011969 148 ------RRS---HFV----SIYRWIEKYYGKMANGCLCVTQAMQHELAQNWGI--KATVLYDQPP-EFFHPTSLEEKHEL 211 (474)
Q Consensus 148 ------~~~---~~~----~~~~~~e~~~~~~ad~vi~vS~~~~~~l~~~~~~--~~~vi~n~~~-~~f~~~~~~~~~~~ 211 (474)
+.+ ..+ +++.++++...+.||.++++|+.+++.+.+.++. ++.++|++.+ +.|.+...
T Consensus 158 ~~~~~~~~~~~~~~k~~y~~~~~~~~~~~~~~aD~ii~~S~~~~~~~~~~~~~~~~~~vi~~gvd~~~~~~~~~------ 231 (419)
T cd03806 158 NSATIARSPVLSKAKLLYYRLFAFLYGLAGSFADVVMVNSTWTRNHIRSLWKRNTKPSIVYPPCDVEELLKLPL------ 231 (419)
T ss_pred CccchhccchHHHHHHHHHHHHHHHHHHHhhcCCEEEECCHHHHHHHHHHhCcCCCcEEEcCCCCHHHhccccc------
Confidence 111 112 2334678888999999999999999999887765 5889998744 33322210
Q ss_pred HHhhhhccCCCCCccccccccccCCcCcchhhhhcccccccccCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhh
Q 011969 212 FCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAI 291 (474)
Q Consensus 212 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~ 291 (474)
....+...++|+|++.+.||++.+++|++.+.++.
T Consensus 232 ------------------------------------------~~~~~~~~il~vgr~~~~K~~~~li~A~~~l~~~~--- 266 (419)
T cd03806 232 ------------------------------------------DEKTRENQILSIAQFRPEKNHPLQLRAFAKLLKRL--- 266 (419)
T ss_pred ------------------------------------------ccccCCcEEEEEEeecCCCCHHHHHHHHHHHHHhC---
Confidence 00122338999999999999999999999987630
Q ss_pred hccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCC------hHHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhccc
Q 011969 292 LNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD------KESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSAD 364 (474)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~------~~~~~~~~~~l~l-~~V~f~g~~v~~~~~~~~l~~ad 364 (474)
+....++++|+|+|++.. .+++++.++++++ ++|.|+|. +|.+++..+|+.||
T Consensus 267 -------------------~~~~~~~~~lvivG~~~~~~~~~~~~~L~~~~~~l~l~~~V~f~g~-v~~~~l~~~l~~ad 326 (419)
T cd03806 267 -------------------PEEIKEKIKLVLIGSCRNEDDEKRVEDLKLLAKELGLEDKVEFVVN-APFEELLEELSTAS 326 (419)
T ss_pred -------------------cccccCceEEEEEcCCCCcccHHHHHHHHHHHHHhCCCCeEEEecC-CCHHHHHHHHHhCe
Confidence 000014699999998742 3567788899999 79999998 99999999999999
Q ss_pred EEEeeccCCCCCCCchHHHHHHhcCCcEEEecccc-cccccc---cCCcEEEeCCHHHHHHHHHHHHhCCCCCHHHHHHH
Q 011969 365 LGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC-IEELVK---VDKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKL 440 (474)
Q Consensus 365 v~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~~-~~e~v~---~~~~G~l~~~~~~la~~i~~l~~~~~~~~~~~~~~ 440 (474)
+++. ++..|+||++++||||||+|||+++.++ ..+++. ++.+|++++|+++++++|.+++++ +++.++.+
T Consensus 327 v~v~---~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g~~G~l~~d~~~la~ai~~ll~~---~~~~~~~~ 400 (419)
T cd03806 327 IGLH---TMWNEHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGFLASTAEEYAEAIEKILSL---SEEERLRI 400 (419)
T ss_pred EEEE---CCccCCcccHHHHHHHcCCcEEEEcCCCCchheeeccCCCCceEEeCCHHHHHHHHHHHHhC---CHHHHHHH
Confidence 9999 6778999999999999999999999765 567887 799999999999999999999986 45566667
Q ss_pred HHHHHHhccccchHH
Q 011969 441 RNGTLEMGLSARWAT 455 (474)
Q Consensus 441 ~~~~~~~~~~~~w~~ 455 (474)
++++++...+++|+.
T Consensus 401 ~~~~~~~~~~fs~~~ 415 (419)
T cd03806 401 RRAARSSVKRFSDEE 415 (419)
T ss_pred HHHHHHHHHhhCHHH
Confidence 777776666777765
|
ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. |
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-31 Score=281.56 Aligned_cols=287 Identities=17% Similarity=0.143 Sum_probs=212.6
Q ss_pred CCCCEEEEeCCCChhHHHHHHHHHhhCC---CcEEEEecCchhhhh-h----hccCCC-chHH-HH-----HHHHHHHHh
Q 011969 100 ASPDVFLVQNPPSVPTLVAVKWASSLRR---SAFIVDWHNFGYTLL-S----LSLGRR-SHFV-SI-----YRWIEKYYG 164 (474)
Q Consensus 100 ~~~Dvi~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~h~~~~~~~-~----~~~~~~-~~~~-~~-----~~~~e~~~~ 164 (474)
.+||+||+|. ..+.+++.+++...+ +|+|+++|++.+.-. . ...+.. ..+. .. ...+.+...
T Consensus 127 ~~~DiiH~hd---w~~~~~~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~ 203 (473)
T TIGR02095 127 WQPDVVHAHD---WHTALVPALLKAVYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGLEFYGRVNFLKGGI 203 (473)
T ss_pred CCCCEEEECC---cHHHHHHHHHHhhccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCchhhhcCCchHHHHHHH
Confidence 6899999999 445555556655544 899999999853110 0 000000 0000 00 012356677
Q ss_pred hhcCEEEEeCHHHHHHHHHH-h-----------CCceEEEeCCCC-CCCCCCCh----------------HHHHHHHHhh
Q 011969 165 KMANGCLCVTQAMQHELAQN-W-----------GIKATVLYDQPP-EFFHPTSL----------------EEKHELFCRL 215 (474)
Q Consensus 165 ~~ad~vi~vS~~~~~~l~~~-~-----------~~~~~vi~n~~~-~~f~~~~~----------------~~~~~~~~~l 215 (474)
+.||.+++||+.+++++.+. + ..++.+|+||.+ +.|.|... ..+..+++++
T Consensus 204 ~~ad~v~tVS~~~~~ei~~~~~~~~l~~~l~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~ 283 (473)
T TIGR02095 204 VYADRVTTVSPTYAREILTPEFGYGLDGVLKARSGKLRGILNGIDTEVWNPATDPYLKANYSADDLAGKAENKEALQEEL 283 (473)
T ss_pred HhCCcCeecCHhHHHHhcCCcCCccchhHHHhcCCCeEEEeCCCCccccCCCCCcccccCcCccchhhhhhhHHHHHHHc
Confidence 89999999999999887642 1 235889999954 66766421 1233445555
Q ss_pred hhccCCCCCccccccccccCCcCcchhhhhcccccccccCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccC
Q 011969 216 NKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNED 295 (474)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~ 295 (474)
|. ...++.+ +++|+|++.+.||++.+++|+..+.+
T Consensus 284 gl-----------------------------------~~~~~~~-~i~~vGrl~~~Kg~~~li~a~~~l~~--------- 318 (473)
T TIGR02095 284 GL-----------------------------------PVDDDVP-LFGVISRLTQQKGVDLLLAALPELLE--------- 318 (473)
T ss_pred CC-----------------------------------CccCCCC-EEEEEecCccccChHHHHHHHHHHHH---------
Confidence 51 0012344 89999999999999999999999876
Q ss_pred CCchhhHhHhhhcCCccccCCCEEEEEEeCCC--ChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcccEEEeeccCC
Q 011969 296 DSTNEEVFLKEISDGKQYLYPRLLFIITGKGP--DKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSS 373 (474)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~--~~~~~~~~~~~l~l~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s 373 (474)
.+++|+|+|+|+ ..+++++.+++++ .++.|.+. .+.+++..+|+.||++++ ||
T Consensus 319 --------------------~~~~lvi~G~g~~~~~~~l~~~~~~~~-~~v~~~~~-~~~~~~~~~~~~aDv~l~---pS 373 (473)
T TIGR02095 319 --------------------LGGQLVVLGTGDPELEEALRELAERYP-GNVRVIIG-YDEALAHLIYAGADFILM---PS 373 (473)
T ss_pred --------------------cCcEEEEECCCCHHHHHHHHHHHHHCC-CcEEEEEc-CCHHHHHHHHHhCCEEEe---CC
Confidence 359999999995 3456777776654 57888887 788889999999999999 78
Q ss_pred CCCCCchHHHHHHhcCCcEEEecccccccccccC------CcEEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Q 011969 374 SGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVD------KNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTL 445 (474)
Q Consensus 374 ~~e~~p~kv~Eama~G~PVia~~~~~~~e~v~~~------~~G~l~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~ 445 (474)
..|+||++++|||+||+|||+++.+++.|+|.++ .+|++++ |+++++++|.++++.+..+++.+++|++++.
T Consensus 374 ~~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~ 453 (473)
T TIGR02095 374 RFEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPEAESGTGFLFEEYDPGALLAALSRALRLYRQDPSLWEALQKNAM 453 (473)
T ss_pred CcCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHh
Confidence 8999999999999999999999999999999988 8999996 7999999999988744445888999999886
Q ss_pred HhccccchHHHHHHHH
Q 011969 446 EMGLSARWATEWEEHA 461 (474)
Q Consensus 446 ~~~~~~~w~~~~~~~~ 461 (474)
+ +.++|+...++..
T Consensus 454 ~--~~fsw~~~a~~~~ 467 (473)
T TIGR02095 454 S--QDFSWDKSAKQYV 467 (473)
T ss_pred c--cCCCcHHHHHHHH
Confidence 4 4788887776643
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. |
| >cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-30 Score=261.28 Aligned_cols=345 Identities=16% Similarity=0.180 Sum_probs=238.0
Q ss_pred eEEEEEeCCCCCCchHHHH-HHHHHhhCCCeEEEEecCCCCCCcceeccCCeEEEEeecCCCCCCCCCchhHHHHHHHHH
Q 011969 6 RACVVVLGDLGRSPRMQYQ-ALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKP 84 (474)
Q Consensus 6 ~~~i~~~~~~g~~~r~~~~-a~~l~~~~g~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (474)
++++......||..|.... +..|.++ ||+|++++..+.... ..... ....+.++ . ..........+..+.
T Consensus 2 il~~~~~~~~gG~~~~~~~l~~~L~~~-g~~v~v~~~~~~~~~-~~~~~-~~~~~~~~---~-~~~~~~~~~~~~~~~-- 72 (360)
T cd04951 2 ILYVITGLGLGGAEKQVVDLADQFVAK-GHQVAIISLTGESEV-KPPID-ATIILNLN---M-SKNPLSFLLALWKLR-- 72 (360)
T ss_pred eEEEecCCCCCCHHHHHHHHHHhcccC-CceEEEEEEeCCCCc-cchhh-ccceEEec---c-cccchhhHHHHHHHH--
Confidence 4455554557787776654 5666665 999999996543321 11111 11122232 1 111111111111111
Q ss_pred HHHHHHHHHHHhhhcCCCCEEEEeCCCChhHHHHHHHHHhh-CCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHH
Q 011969 85 LIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSL-RRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYY 163 (474)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~Dvi~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 163 (474)
.++ +..+||+||+|.+.. ..+..++++. .+.+++++.|+... ... ...++.+..
T Consensus 73 ---------~~~-~~~~pdiv~~~~~~~---~~~~~l~~~~~~~~~~v~~~h~~~~---------~~~---~~~~~~~~~ 127 (360)
T cd04951 73 ---------KIL-RQFKPDVVHAHMFHA---NIFARLLRLFLPSPPLICTAHSKNE---------GGR---LRMLAYRLT 127 (360)
T ss_pred ---------HHH-HhcCCCEEEEcccch---HHHHHHHHhhCCCCcEEEEeeccCc---------hhH---HHHHHHHHH
Confidence 112 227899999998532 2234444443 46789999998721 111 223445556
Q ss_pred hhhcCEEEEeCHHHHHHHHHHhC---CceEEEeCCCC-CCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCc
Q 011969 164 GKMANGCLCVTQAMQHELAQNWG---IKATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKA 239 (474)
Q Consensus 164 ~~~ad~vi~vS~~~~~~l~~~~~---~~~~vi~n~~~-~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 239 (474)
.+.++.++++|+...+++.+..+ .++.+++|+.+ ..|.+.. .....+++.++
T Consensus 128 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~i~ng~~~~~~~~~~-~~~~~~~~~~~----------------------- 183 (360)
T cd04951 128 DFLSDLTTNVSKEALDYFIASKAFNANKSFVVYNGIDTDRFRKDP-ARRLKIRNALG----------------------- 183 (360)
T ss_pred hhccCceEEEcHHHHHHHHhccCCCcccEEEEccccchhhcCcch-HHHHHHHHHcC-----------------------
Confidence 66788999999999998887643 24889999854 4454432 22333444444
Q ss_pred chhhhhcccccccccCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEE
Q 011969 240 DETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLL 319 (474)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (474)
+.+++ .+++|+|++.+.||++.+++++..+.++ .|+++
T Consensus 184 --------------~~~~~-~~~l~~g~~~~~kg~~~li~a~~~l~~~---------------------------~~~~~ 221 (360)
T cd04951 184 --------------VKNDT-FVILAVGRLVEAKDYPNLLKAFAKLLSD---------------------------YLDIK 221 (360)
T ss_pred --------------cCCCC-EEEEEEeeCchhcCcHHHHHHHHHHHhh---------------------------CCCeE
Confidence 22333 4899999999999999999999988763 58899
Q ss_pred EEEEeCCCChHHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEeccc
Q 011969 320 FIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS 398 (474)
Q Consensus 320 l~ivG~g~~~~~~~~~~~~l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~ 398 (474)
|+|+|+|+..+++++.++++++ ++|.|.|. .+++..+|+.||++++ +|..|++|++++|||+||+|||+++.+
T Consensus 222 l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~---~~~~~~~~~~ad~~v~---~s~~e~~~~~~~Ea~a~G~PvI~~~~~ 295 (360)
T cd04951 222 LLIAGDGPLRATLERLIKALGLSNRVKLLGL---RDDIAAYYNAADLFVL---SSAWEGFGLVVAEAMACELPVVATDAG 295 (360)
T ss_pred EEEEcCCCcHHHHHHHHHhcCCCCcEEEecc---cccHHHHHHhhceEEe---cccccCCChHHHHHHHcCCCEEEecCC
Confidence 9999999999999999999988 68999997 6899999999999999 677799999999999999999999999
Q ss_pred ccccccccCCcEEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHH
Q 011969 399 CIEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHA 461 (474)
Q Consensus 399 ~~~e~v~~~~~G~l~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ 461 (474)
+..|++.+ +|+++. |+++++++|..++++ +++.++.++++.....+.++|+...++..
T Consensus 296 ~~~e~i~~--~g~~~~~~~~~~~~~~i~~ll~~---~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 355 (360)
T cd04951 296 GVREVVGD--SGLIVPISDPEALANKIDEILKM---SGEERDIIGARRERIVKKFSINSIVQQWL 355 (360)
T ss_pred ChhhEecC--CceEeCCCCHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 99999976 677764 799999999999965 46666777666333446788876655544
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have |
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-30 Score=263.58 Aligned_cols=335 Identities=16% Similarity=0.185 Sum_probs=241.8
Q ss_pred CCCCCchHHHH-HHHHHhhCCCeEEEEecCCCCCCcceeccCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHHHHH
Q 011969 14 DLGRSPRMQYQ-ALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLL 92 (474)
Q Consensus 14 ~~g~~~r~~~~-a~~l~~~~g~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (474)
+.||..++... +..|.++ ||+|+|++....... ......++++++++.... ... ..........
T Consensus 12 ~~gG~~~~~~~l~~~L~~~-g~~v~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~--------- 76 (357)
T cd03795 12 DRGGIEQVIRDLAEGLAAR-GIEVAVLCASPEPKG-RDEERNGHRVIRAPSLLN--VAS--TPFSPSFFKQ--------- 76 (357)
T ss_pred CCCcHHHHHHHHHHHHHhC-CCceEEEecCCCCcc-hhhhccCceEEEeecccc--ccc--ccccHHHHHH---------
Confidence 35666666544 5677775 999999997754432 222344667777662211 100 0000111000
Q ss_pred HHHhhhcCCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhhhcCEEEE
Q 011969 93 WFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLC 172 (474)
Q Consensus 93 ~~~~~~~~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~ 172 (474)
.. .+..+||+||++.+...... ..+.. ..+.|.++++|+... ....+...+.++++.+.+.||.+++
T Consensus 77 -~~-~~~~~~Dii~~~~~~~~~~~--~~~~~-~~~~~~i~~~h~~~~--------~~~~~~~~~~~~~~~~~~~~d~vi~ 143 (357)
T cd03795 77 -LK-KLAKKADVIHLHFPNPLADL--ALLLL-PRKKPVVVHWHSDIV--------KQKLLLKLYRPLQRRFLRRADAIVA 143 (357)
T ss_pred -HH-hcCCCCCEEEEecCcchHHH--HHHHh-ccCceEEEEEcChhh--------ccchhhhhhhHHHHHHHHhcCEEEe
Confidence 00 23378999999986544332 22222 257899999997621 1223445667888889999999999
Q ss_pred eCHHHHHHHHHHhC--CceEEEeCCCC-CCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhcccc
Q 011969 173 VTQAMQHELAQNWG--IKATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAG 249 (474)
Q Consensus 173 vS~~~~~~l~~~~~--~~~~vi~n~~~-~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (474)
+|+.+++.+....+ .++.+++|+.+ ..+.+.... .. ...
T Consensus 144 ~s~~~~~~~~~~~~~~~~~~~i~~gi~~~~~~~~~~~-~~---~~~---------------------------------- 185 (357)
T cd03795 144 TSPNYAETSPVLRRFRDKVRVIPLGLDPARYPRPDAL-EE---AIW---------------------------------- 185 (357)
T ss_pred CcHHHHHHHHHhcCCccceEEecCCCChhhcCCcchh-hh---Hhh----------------------------------
Confidence 99999987766543 45889999855 344333211 10 000
Q ss_pred cccccCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCCh
Q 011969 250 IDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK 329 (474)
Q Consensus 250 ~~~~~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~ 329 (474)
..+..+..++|+|++.+.||++.+++|++.+ .+++|+|+|+|+..
T Consensus 186 ----~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l-------------------------------~~~~l~i~G~g~~~ 230 (357)
T cd03795 186 ----RRAAGRPFFLFVGRLVYYKGLDVLLEAAAAL-------------------------------PDAPLVIVGEGPLE 230 (357)
T ss_pred ----cCCCCCcEEEEecccccccCHHHHHHHHHhc-------------------------------cCcEEEEEeCChhH
Confidence 1123334899999999999999999999886 26999999999998
Q ss_pred HHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEeccccccccccc-C
Q 011969 330 ESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKV-D 407 (474)
Q Consensus 330 ~~~~~~~~~l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~~~~e~v~~-~ 407 (474)
+.+++.+++++. ++|.|.|. ++.+++..+|+.||++++|.. ...|++|++++|||+||+|||+++.++..+.+.+ +
T Consensus 231 ~~~~~~~~~~~~~~~V~~~g~-v~~~~~~~~~~~ad~~i~ps~-~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~~~ 308 (357)
T cd03795 231 AELEALAAALGLLDRVRFLGR-LDDEEKAALLAACDVFVFPSV-ERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNLHG 308 (357)
T ss_pred HHHHHHHHhcCCcceEEEcCC-CCHHHHHHHHHhCCEEEeCCc-ccccccchHHHHHHHcCCCEEecCCCCchhHHhhCC
Confidence 889999988888 79999998 999999999999999999511 1468999999999999999999999999998886 8
Q ss_pred CcEEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc-cccchHH
Q 011969 408 KNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARWAT 455 (474)
Q Consensus 408 ~~G~l~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~ 455 (474)
.+|++++ |+++++++|..++++ ++.+++|++++++.. +.++|+.
T Consensus 309 ~~g~~~~~~d~~~~~~~i~~l~~~----~~~~~~~~~~~~~~~~~~~s~~~ 355 (357)
T cd03795 309 VTGLVVPPGDPAALAEAIRRLLED----PELRERLGEAARERAEEEFTADR 355 (357)
T ss_pred CceEEeCCCCHHHHHHHHHHHHHC----HHHHHHHHHHHHHHHHHhcchHh
Confidence 9999985 699999999999994 899999999999876 5566653
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-31 Score=265.97 Aligned_cols=328 Identities=20% Similarity=0.174 Sum_probs=238.9
Q ss_pred CCchHHHHHHHHHhhCCCeEEEEecCCCCCCcceeccCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHh
Q 011969 17 RSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLC 96 (474)
Q Consensus 17 ~~~r~~~~a~~l~~~~g~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (474)
....+..++.+|.++ ||+|+|++.......... . . ..... .........+.. +.... .+...+
T Consensus 13 ~~~~~~~~~~~L~~~-g~~v~v~~~~~~~~~~~~-~--~--~~~~~------~~~~~~~~~~~~----~~~~~-~~~~~~ 75 (355)
T cd03799 13 SETFILREILALEAA-GHEVEIFSLRPPEDTLVH-P--E--DRAEL------ARTRYLARSLAL----LAQAL-VLAREL 75 (355)
T ss_pred chHHHHHHHHHHHhC-CCeEEEEEecCccccccc-c--c--ccccc------cchHHHHHHHHH----HHHHH-HHHHHH
Confidence 445567778888886 999999997654321110 0 0 00000 000000111111 11100 111111
Q ss_pred hhcCCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhhhcCEEEEeCHH
Q 011969 97 VKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQA 176 (474)
Q Consensus 97 ~~~~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~ 176 (474)
+..++|+||+|.+.. ...+..+.++..+.|++++.|+... ...... +.++...+.+|.++++|+.
T Consensus 76 -~~~~~Dii~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~-----~~~~~~~~~~~~vi~~s~~ 140 (355)
T cd03799 76 -RRLGIDHIHAHFGTT--PATVAMLASRLGGIPYSFTAHGKDI-------FRSPDA-----IDLDEKLARADFVVAISEY 140 (355)
T ss_pred -HhcCCCEEEECCCCc--hHHHHHHHHHhcCCCEEEEEecccc-------cccCch-----HHHHHHHhhCCEEEECCHH
Confidence 237899999998642 2334566666678999999997631 111110 4566677899999999999
Q ss_pred HHHHHHHHhCC---ceEEEeCCCC-CCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhccccccc
Q 011969 177 MQHELAQNWGI---KATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDV 252 (474)
Q Consensus 177 ~~~~l~~~~~~---~~~vi~n~~~-~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (474)
+++++.+.++. ++.+++|+.+ +.|.+..
T Consensus 141 ~~~~l~~~~~~~~~~~~vi~~~~d~~~~~~~~------------------------------------------------ 172 (355)
T cd03799 141 NRQQLIRLLGCDPDKIHVVHCGVDLERFPPRP------------------------------------------------ 172 (355)
T ss_pred HHHHHHHhcCCCcccEEEEeCCcCHHHcCCcc------------------------------------------------
Confidence 99999886433 4889999855 3333221
Q ss_pred ccCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCChHHH
Q 011969 253 FLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESY 332 (474)
Q Consensus 253 ~~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~~ 332 (474)
....+.+..++|+|++.+.||++.+++++..+.+ ..++++|+|+|.|+..+.+
T Consensus 173 ~~~~~~~~~i~~~g~~~~~k~~~~l~~~~~~l~~---------------------------~~~~~~l~i~G~~~~~~~~ 225 (355)
T cd03799 173 PPPPGEPLRILSVGRLVEKKGLDYLLEALALLKD---------------------------RGIDFRLDIVGDGPLRDEL 225 (355)
T ss_pred ccccCCCeEEEEEeeeccccCHHHHHHHHHHHhh---------------------------cCCCeEEEEEECCccHHHH
Confidence 0012334589999999999999999999999876 2578999999999999999
Q ss_pred HHHHHHcCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCCC------CCCchHHHHHHhcCCcEEEecccccccccc
Q 011969 333 EEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSG------LDLPMKVVDMFGCGLPVCAVSYSCIEELVK 405 (474)
Q Consensus 333 ~~~~~~l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~------e~~p~kv~Eama~G~PVia~~~~~~~e~v~ 405 (474)
++.++++++ ++|.|.|. ++.+++..+|+.||++++| +.. |++|++++|||+||+|||+++.++..+++.
T Consensus 226 ~~~~~~~~~~~~v~~~g~-~~~~~l~~~~~~adi~l~~---s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~i~ 301 (355)
T cd03799 226 EALIAELGLEDRVTLLGA-KSQEEVRELLRAADLFVLP---SVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIPELVE 301 (355)
T ss_pred HHHHHHcCCCCeEEECCc-CChHHHHHHHHhCCEEEec---ceecCCCCccCccHHHHHHHHcCCCEEecCCCCcchhhh
Confidence 999999988 69999998 9999999999999999994 544 999999999999999999999999999999
Q ss_pred cCCcEEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc-cccchHHHHHH
Q 011969 406 VDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARWATEWEE 459 (474)
Q Consensus 406 ~~~~G~l~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~~~ 459 (474)
++.+|++++ |+++++++|..++++ ++.+.++++++++.. ..++|+...++
T Consensus 302 ~~~~g~~~~~~~~~~l~~~i~~~~~~----~~~~~~~~~~a~~~~~~~~s~~~~~~~ 354 (355)
T cd03799 302 DGETGLLVPPGDPEALADAIERLLDD----PELRREMGEAGRARVEEEFDIRKQAAR 354 (355)
T ss_pred CCCceEEeCCCCHHHHHHHHHHHHhC----HHHHHHHHHHHHHHHHHhcCHHHHhhc
Confidence 998999996 799999999999985 788999999998765 56888876643
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. |
| >PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-30 Score=269.79 Aligned_cols=331 Identities=15% Similarity=0.159 Sum_probs=230.4
Q ss_pred chHHHHHHHHHhhCCCeEEEEecCCCCCCcceeccCCeEEEEeecCCCCCCCCCch--hHHHHHHHHHHHHHHHHHHHHh
Q 011969 19 PRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKV--LKPVLLLLKPLIQFFMLLWFLC 96 (474)
Q Consensus 19 ~r~~~~a~~l~~~~g~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 96 (474)
+..+.....+++...++|+++|.............+|+.+|+++..........++ ...+..... ++..+
T Consensus 21 g~ve~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~ 92 (380)
T PRK15484 21 AAVETWIYQVAKRTSIPNRIACIKNPGYPEYTKVNDNCDIHYIGFSRIYKRLFQKWTRLDPLPYSQR--------ILNIA 92 (380)
T ss_pred cHHHHHHHHhhhhccCCeeEEEecCCCCCchhhccCCCceEEEEeccccchhhhhhhccCchhHHHH--------HHHHH
Confidence 44555555555544579999998766522232556678888886111100000110 001111111 11111
Q ss_pred --hhcCCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhhhcCEEEEeC
Q 011969 97 --VKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVT 174 (474)
Q Consensus 97 --~~~~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS 174 (474)
....++|+||+|+.+ .+ ...+..+..+.|+++++|+... ....+.++.++++|
T Consensus 93 ~~~~~~~~~vi~v~~~~---~~-~~~~~~~~~~~~~v~~~h~~~~---------------------~~~~~~~~~ii~~S 147 (380)
T PRK15484 93 HKFTITKDSVIVIHNSM---KL-YRQIRERAPQAKLVMHMHNAFE---------------------PELLDKNAKIIVPS 147 (380)
T ss_pred HhcCCCCCcEEEEeCcH---Hh-HHHHHhhCCCCCEEEEEecccC---------------------hhHhccCCEEEEcC
Confidence 123569999999942 22 2444556677899999998721 01124579999999
Q ss_pred HHHHHHHHHHhCC-ceEEEeCCCC-CCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhccccccc
Q 011969 175 QAMQHELAQNWGI-KATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDV 252 (474)
Q Consensus 175 ~~~~~~l~~~~~~-~~~vi~n~~~-~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (474)
+.+++.+.+.++. ++.++|||.+ +.|.+.. ...++++++
T Consensus 148 ~~~~~~~~~~~~~~~i~vIpngvd~~~~~~~~---~~~~~~~~~------------------------------------ 188 (380)
T PRK15484 148 QFLKKFYEERLPNADISIVPNGFCLETYQSNP---QPNLRQQLN------------------------------------ 188 (380)
T ss_pred HHHHHHHHhhCCCCCEEEecCCCCHHHcCCcc---hHHHHHHhC------------------------------------
Confidence 9999988876543 4899999954 4565432 222333444
Q ss_pred ccCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCCh---
Q 011969 253 FLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK--- 329 (474)
Q Consensus 253 ~~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~--- 329 (474)
+..+. .+++|+|++.+.||++.|++|+..+.++ .|+++|+|+|+|+..
T Consensus 189 -~~~~~-~~il~~Grl~~~Kg~~~Li~A~~~l~~~---------------------------~p~~~lvivG~g~~~~~~ 239 (380)
T PRK15484 189 -ISPDE-TVLLYAGRISPDKGILLLMQAFEKLATA---------------------------HSNLKLVVVGDPTASSKG 239 (380)
T ss_pred -CCCCC-eEEEEeccCccccCHHHHHHHHHHHHHh---------------------------CCCeEEEEEeCCcccccc
Confidence 22233 3899999999999999999999998763 789999999988642
Q ss_pred --H----HHHHHHHHcCCCcEEEecCCCCcccHHHHHhcccEEEeeccCCC-CCCCchHHHHHHhcCCcEEEeccccccc
Q 011969 330 --E----SYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS-GLDLPMKVVDMFGCGLPVCAVSYSCIEE 402 (474)
Q Consensus 330 --~----~~~~~~~~l~l~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~-~e~~p~kv~Eama~G~PVia~~~~~~~e 402 (474)
. .+++.+++++ .+|.|+|. ++.+++..+|+.||++|+ ||. .|+||++++||||||+|||+++.+++.|
T Consensus 240 ~~~~~~~~l~~~~~~l~-~~v~~~G~-~~~~~l~~~~~~aDv~v~---pS~~~E~f~~~~lEAma~G~PVI~s~~gg~~E 314 (380)
T PRK15484 240 EKAAYQKKVLEAAKRIG-DRCIMLGG-QPPEKMHNYYPLADLVVV---PSQVEEAFCMVAVEAMAAGKPVLASTKGGITE 314 (380)
T ss_pred chhHHHHHHHHHHHhcC-CcEEEeCC-CCHHHHHHHHHhCCEEEe---CCCCccccccHHHHHHHcCCCEEEeCCCCcHh
Confidence 2 3444455555 58999998 999999999999999999 564 6999999999999999999999999999
Q ss_pred ccccCCcEEE-eC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc-cccchHHHHHHH
Q 011969 403 LVKVDKNGLL-FS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARWATEWEEH 460 (474)
Q Consensus 403 ~v~~~~~G~l-~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~~~~ 460 (474)
++.++.+|++ ++ |+++++++|..++++ ++ +.++++++++.. +.++|+..-+++
T Consensus 315 iv~~~~~G~~l~~~~d~~~la~~I~~ll~d----~~-~~~~~~~ar~~~~~~fsw~~~a~~~ 371 (380)
T PRK15484 315 FVLEGITGYHLAEPMTSDSIISDINRTLAD----PE-LTQIAEQAKDFVFSKYSWEGVTQRF 371 (380)
T ss_pred hcccCCceEEEeCCCCHHHHHHHHHHHHcC----HH-HHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 9999999984 43 799999999999985 65 467899988754 578777655543
|
|
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-30 Score=286.84 Aligned_cols=370 Identities=18% Similarity=0.154 Sum_probs=241.7
Q ss_pred ceEEEEEeCCCCCCchHHH-HHHHHHhhCCC------------eEEEEec-----CCCCCCcceeccCCeEEEEeecCCC
Q 011969 5 GRACVVVLGDLGRSPRMQY-QALSLARQMSL------------EVDVVAY-----GGSKPHAAILEHPSIHIHTMTQWPT 66 (474)
Q Consensus 5 ~~~~i~~~~~~g~~~r~~~-~a~~l~~~~g~------------eV~Vv~~-----~~~~~~~~~~~~~gi~i~~~~~~~~ 66 (474)
++++++.....||++|... .+..+.+. ++ ++.|++. .+.......+...|+.++.++...
T Consensus 283 rIl~vi~sl~~GGAEr~~~~La~~l~~~-~~~~~~~~g~g~~~~~~V~~~~~~~~~g~~~~~~~L~~~Gv~v~~l~~~~- 360 (694)
T PRK15179 283 PVLMINGSLGAGGAERQFVNTAVALQSA-IQQGQSIAGYGVLGPVQVVCRSLRSREGADFFAATLADAGIPVSVYSDMQ- 360 (694)
T ss_pred eEEEEeCCCCCCcHHHHHHHHHHHHHhc-ccCcccccCccCCCCcEEEEEecccccCcchHHHHHHhCCCeEEEeccCC-
Confidence 3566777777899998664 45666664 43 3445542 111222234446799999997221
Q ss_pred CCCCCCc---hhHHHHHHH----HHHHHHHHHHHHHhhhcCCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEE-EecCch
Q 011969 67 IPRGLPK---VLKPVLLLL----KPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIV-DWHNFG 138 (474)
Q Consensus 67 ~~~~~~~---~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~h~~~ 138 (474)
..+... ....+..++ ........-+..++ +..+||+||+|++ ...+++.+++++.++|+|+ +.|++.
T Consensus 361 -~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~L~~~l-k~~kpDIVH~h~~---~a~~lg~lAa~~~gvPvIv~t~h~~~ 435 (694)
T PRK15179 361 -AWGGCEFSSLLAPYREYLRFLPKQIIEGTTKLTDVM-RSSVPSVVHIWQD---GSIFACALAALLAGVPRIVLSVRTMP 435 (694)
T ss_pred -ccCcccccccchhhHHHhhhcchhHHHHHHHHHHHH-HHcCCcEEEEeCC---cHHHHHHHHHHHcCCCEEEEEeCCCc
Confidence 111110 000111000 00001011111222 2378999999984 3344566777778889876 567652
Q ss_pred hhhhhhccCCCchHHHHHHHHHHHHh-hhcCEEEEeCHHHHHHHHHHhCCc---eEEEeCCCC-CCCCCCChHHHHHHHH
Q 011969 139 YTLLSLSLGRRSHFVSIYRWIEKYYG-KMANGCLCVTQAMQHELAQNWGIK---ATVLYDQPP-EFFHPTSLEEKHELFC 213 (474)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~e~~~~-~~ad~vi~vS~~~~~~l~~~~~~~---~~vi~n~~~-~~f~~~~~~~~~~~~~ 213 (474)
.. .....+...+..+.+.+. ..++.+++.|+..++.+.+.++.+ +.+||||.+ +.|.+.+... ..+.
T Consensus 436 ~~------~~~~~~~~~~~~l~~~l~~~~~~i~Vs~S~~~~~~l~~~~g~~~~kI~VI~NGVd~~~f~~~~~~~--~~~~ 507 (694)
T PRK15179 436 PV------DRPDRYRVEYDIIYSELLKMRGVALSSNSQFAAHRYADWLGVDERRIPVVYNGLAPLKSVQDDACT--AMMA 507 (694)
T ss_pred cc------cchhHHHHHHHHHHHHHHhcCCeEEEeCcHHHHHHHHHHcCCChhHEEEECCCcCHHhcCCCchhh--HHHH
Confidence 11 011112222222222222 234566777788887777766653 899999954 5565432111 1111
Q ss_pred hhhhccCCCCCccccccccccCCcCcchhhhhcccccccccCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhc
Q 011969 214 RLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILN 293 (474)
Q Consensus 214 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~ 293 (474)
.+.. .. ++...+|+++|++.+.||++.+++|+..+.++
T Consensus 508 ~~~~-----------------------------------~~-~~~~~vIg~VGRL~~~KG~~~LI~A~a~l~~~------ 545 (694)
T PRK15179 508 QFDA-----------------------------------RT-SDARFTVGTVMRVDDNKRPFLWVEAAQRFAAS------ 545 (694)
T ss_pred hhcc-----------------------------------cc-CCCCeEEEEEEeCCccCCHHHHHHHHHHHHHH------
Confidence 1110 01 22234889999999999999999999988763
Q ss_pred cCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCChHHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcccEEEeeccC
Q 011969 294 EDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTS 372 (474)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~~~l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~ 372 (474)
.|+++|+|+|+|+..+++++.++++++ ++|.|+|. .+++..+|+.||++|+ +
T Consensus 546 ---------------------~p~~~LvIvG~G~~~~~L~~l~~~lgL~~~V~flG~---~~dv~~ll~aaDv~Vl---p 598 (694)
T PRK15179 546 ---------------------HPKVRFIMVGGGPLLESVREFAQRLGMGERILFTGL---SRRVGYWLTQFNAFLL---L 598 (694)
T ss_pred ---------------------CcCeEEEEEccCcchHHHHHHHHHcCCCCcEEEcCC---cchHHHHHHhcCEEEe---c
Confidence 689999999999999999999999999 79999998 5689999999999999 6
Q ss_pred CCCCCCchHHHHHHhcCCcEEEecccccccccccCCcEEEeC--C--HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc
Q 011969 373 SSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFS--S--SSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG 448 (474)
Q Consensus 373 s~~e~~p~kv~Eama~G~PVia~~~~~~~e~v~~~~~G~l~~--~--~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~ 448 (474)
|..|+||++++|||+||+|||+|+.+++.|+|.++.+|++++ | +++++++|..+++....++ .+++++++.+
T Consensus 599 S~~Egfp~vlLEAMA~G~PVVat~~gG~~EiV~dg~~GlLv~~~d~~~~~La~aL~~ll~~l~~~~----~l~~~ar~~a 674 (694)
T PRK15179 599 SRFEGLPNVLIEAQFSGVPVVTTLAGGAGEAVQEGVTGLTLPADTVTAPDVAEALARIHDMCAADP----GIARKAADWA 674 (694)
T ss_pred cccccchHHHHHHHHcCCeEEEECCCChHHHccCCCCEEEeCCCCCChHHHHHHHHHHHhChhccH----HHHHHHHHHH
Confidence 888999999999999999999999999999999999999996 4 4689999999887533334 4455555544
Q ss_pred -cccchHHHHHHHHH
Q 011969 449 -LSARWATEWEEHAK 462 (474)
Q Consensus 449 -~~~~w~~~~~~~~~ 462 (474)
..++|+...+++.+
T Consensus 675 ~~~FS~~~~~~~~~~ 689 (694)
T PRK15179 675 SARFSLNQMIASTVR 689 (694)
T ss_pred HHhCCHHHHHHHHHH
Confidence 37888887766543
|
|
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-30 Score=256.06 Aligned_cols=347 Identities=22% Similarity=0.290 Sum_probs=246.9
Q ss_pred CCCchHHHHHHHHHhhCCCeEEEEecCCCCCCcceeccCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHH
Q 011969 16 GRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFL 95 (474)
Q Consensus 16 g~~~r~~~~a~~l~~~~g~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (474)
|+..++...+..|.+. ||+|++++............. ........ . ........... .... .+..
T Consensus 15 G~~~~~~~l~~~L~~~-g~~v~i~~~~~~~~~~~~~~~-~~~~~~~~--~--~~~~~~~~~~~----~~~~----~~~~- 79 (374)
T cd03801 15 GAERHVLELARALAAR-GHEVTVLTPGDGGLPDEEEVG-GIVVVRPP--P--LLRVRRLLLLL----LLAL----RLRR- 79 (374)
T ss_pred cHhHHHHHHHHHHHhc-CceEEEEecCCCCCCceeeec-CcceecCC--c--ccccchhHHHH----HHHH----HHHH-
Confidence 3455677778888886 999999997754432221111 11111000 0 00000000000 0000 1111
Q ss_pred hhhcCCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhhhcCEEEEeCH
Q 011969 96 CVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQ 175 (474)
Q Consensus 96 ~~~~~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~ 175 (474)
..+..+||+||++++...... ...++..+.|+++++|+..+..... ............++...+.+|.++++|+
T Consensus 80 ~~~~~~~Dii~~~~~~~~~~~---~~~~~~~~~~~i~~~h~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~d~~i~~s~ 153 (374)
T cd03801 80 LLRRERFDVVHAHDWLALLAA---ALAARLLGIPLVLTVHGLEFGRPGN---ELGLLLKLARALERRALRRADRIIAVSE 153 (374)
T ss_pred HhhhcCCcEEEEechhHHHHH---HHHHHhcCCcEEEEeccchhhcccc---chhHHHHHHHHHHHHHHHhCCEEEEecH
Confidence 122368999999996443332 2556678899999999985322110 1122235556778888899999999999
Q ss_pred HHHHHHHHHhCC---ceEEEeCCCC-CCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhcccccc
Q 011969 176 AMQHELAQNWGI---KATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGID 251 (474)
Q Consensus 176 ~~~~~l~~~~~~---~~~vi~n~~~-~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (474)
.+++.+.+.++. ++.+++++.+ ..+.+.. ...+...
T Consensus 154 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~----~~~~~~~------------------------------------ 193 (374)
T cd03801 154 ATREELRELGGVPPEKITVIPNGVDTERFRPAP----RAARRRL------------------------------------ 193 (374)
T ss_pred HHHHHHHhcCCCCCCcEEEecCcccccccCccc----hHHHhhc------------------------------------
Confidence 999999988765 5899999843 3443322 1111111
Q ss_pred cccCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCChHH
Q 011969 252 VFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKES 331 (474)
Q Consensus 252 ~~~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~ 331 (474)
...+....++|+|++.+.||++.+++++..+.++ .++++|+++|.++..+.
T Consensus 194 --~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~---------------------------~~~~~l~i~G~~~~~~~ 244 (374)
T cd03801 194 --GIPEDEPVILFVGRLVPRKGVDLLLEALAKLRKE---------------------------YPDVRLVIVGDGPLREE 244 (374)
T ss_pred --CCcCCCeEEEEecchhhhcCHHHHHHHHHHHhhh---------------------------cCCeEEEEEeCcHHHHH
Confidence 1123344899999999999999999999998773 57899999999988888
Q ss_pred HHHHHHHcCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecccccccccccCCcE
Q 011969 332 YEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNG 410 (474)
Q Consensus 332 ~~~~~~~l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~~~~e~v~~~~~G 410 (474)
+++.+++++. ++|.+.|. ++.+++..+|+.||++++ ++..+++|++++|||+||+|||+++.++..+++.++.+|
T Consensus 245 ~~~~~~~~~~~~~v~~~g~-~~~~~~~~~~~~~di~i~---~~~~~~~~~~~~Ea~~~g~pvI~~~~~~~~~~~~~~~~g 320 (374)
T cd03801 245 LEALAAELGLGDRVTFLGF-VPDEDLPALYAAADVFVL---PSLYEGFGLVLLEAMAAGLPVVASDVGGIPEVVEDGETG 320 (374)
T ss_pred HHHHHHHhCCCcceEEEec-cChhhHHHHHHhcCEEEe---cchhccccchHHHHHHcCCcEEEeCCCChhHHhcCCcce
Confidence 8888888888 79999998 999999999999999999 565589999999999999999999999999999989999
Q ss_pred EEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH-hccccchHHHHHHH
Q 011969 411 LLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLE-MGLSARWATEWEEH 460 (474)
Q Consensus 411 ~l~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~w~~~~~~~ 460 (474)
++++ |+++++++|.+++++ ++.++++++++++ ..+.++|+...++.
T Consensus 321 ~~~~~~~~~~l~~~i~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (374)
T cd03801 321 LLVPPGDPEALAEAILRLLDD----PELRRRLGEAARERVAERFSWDRVAART 369 (374)
T ss_pred EEeCCCCHHHHHHHHHHHHcC----hHHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 9996 489999999999885 7888999999884 34577777655443
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. |
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-30 Score=252.72 Aligned_cols=327 Identities=20% Similarity=0.240 Sum_probs=233.2
Q ss_pred CCCCchHHH-HHHHHHhhCCCeEEEEecCCCCCCcceeccCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHHHHHH
Q 011969 15 LGRSPRMQY-QALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLW 93 (474)
Q Consensus 15 ~g~~~r~~~-~a~~l~~~~g~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (474)
.||..|+.. .+..|.++ ||+|++++..... ........++.+..++.... ............+.+.
T Consensus 12 ~gG~~~~~~~l~~~L~~~-g~~v~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~--------- 78 (348)
T cd03820 12 AGGAERVLSNLANALAEK-GHEVTIISLDKGE-PPFYELDPKIKVIDLGDKRD--SKLLARFKKLRRLRKL--------- 78 (348)
T ss_pred CCChHHHHHHHHHHHHhC-CCeEEEEecCCCC-CCccccCCccceeecccccc--cchhccccchHHHHHh---------
Confidence 577777554 56677775 9999999977654 11223345677776662111 1001111111111111
Q ss_pred HHhhhcCCCCEEEEeCCCChhHHHHHHHHHhhCC-CcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhhhcCEEEE
Q 011969 94 FLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRR-SAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLC 172 (474)
Q Consensus 94 ~~~~~~~~~Dvi~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~ 172 (474)
+ +..+||+|+++.+. .. ........+ .|++++.|+... ...... .....++.+.+.+|.+++
T Consensus 79 --l-~~~~~d~i~~~~~~-~~----~~~~~~~~~~~~~i~~~~~~~~-------~~~~~~--~~~~~~~~~~~~~d~ii~ 141 (348)
T cd03820 79 --L-KNNKPDVVISFLTS-LL----TFLASLGLKIVKLIVSEHNSPD-------AYKKRL--RRLLLRRLLYRRADAVVV 141 (348)
T ss_pred --h-cccCCCEEEEcCch-HH----HHHHHHhhccccEEEecCCCcc-------chhhhh--HHHHHHHHHHhcCCEEEE
Confidence 1 23799999999965 11 122222333 489999998731 111111 111257888899999999
Q ss_pred eCHHHHHHHHHHhCCceEEEeCCCCCCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhccccccc
Q 011969 173 VTQAMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDV 252 (474)
Q Consensus 173 vS~~~~~~l~~~~~~~~~vi~n~~~~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (474)
+|+.++.......+.++.+++|+.+.......
T Consensus 142 ~s~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~------------------------------------------------ 173 (348)
T cd03820 142 LTEEDRALYYKKFNKNVVVIPNPLPFPPEEPS------------------------------------------------ 173 (348)
T ss_pred eCHHHHHHhhccCCCCeEEecCCcChhhcccc------------------------------------------------
Confidence 99999733333335568999998542111100
Q ss_pred ccCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCChHHH
Q 011969 253 FLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESY 332 (474)
Q Consensus 253 ~~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~~ 332 (474)
.......++++|++.+.||++.++++++.+.++ .|+++|+|+|+|++.+.+
T Consensus 174 --~~~~~~~i~~~g~~~~~K~~~~l~~~~~~l~~~---------------------------~~~~~l~i~G~~~~~~~~ 224 (348)
T cd03820 174 --SDLKSKRILAVGRLVPQKGFDLLIEAWAKIAKK---------------------------HPDWKLRIVGDGPEREAL 224 (348)
T ss_pred --CCCCCcEEEEEEeeccccCHHHHHHHHHHHHhc---------------------------CCCeEEEEEeCCCCHHHH
Confidence 012233899999999999999999999998763 689999999999999989
Q ss_pred HHHHHHcCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecc-cccccccccCCcE
Q 011969 333 EEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY-SCIEELVKVDKNG 410 (474)
Q Consensus 333 ~~~~~~l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~-~~~~e~v~~~~~G 410 (474)
++.++++++ ++|.|.|. .+++..+|+.||++++ ++..|++|++++|||+||+|||+++. ++..+++.++.+|
T Consensus 225 ~~~~~~~~~~~~v~~~g~---~~~~~~~~~~ad~~i~---ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~~~~~~~~g 298 (348)
T cd03820 225 EALIKELGLEDRVILLGF---TKNIEEYYAKASIFVL---TSRFEGFPMVLLEAMAFGLPVISFDCPTGPSEIIEDGVNG 298 (348)
T ss_pred HHHHHHcCCCCeEEEcCC---cchHHHHHHhCCEEEe---CccccccCHHHHHHHHcCCCEEEecCCCchHhhhccCcce
Confidence 988999988 68999987 7999999999999999 67779999999999999999999986 4566777777799
Q ss_pred EEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHH
Q 011969 411 LLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWE 458 (474)
Q Consensus 411 ~l~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~ 458 (474)
++++ |+++++++|.+++++ ++.+++|++++.+..++++|+...+
T Consensus 299 ~~~~~~~~~~~~~~i~~ll~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (348)
T cd03820 299 LLVPNGDVEALAEALLRLMED----EELRKRMGANARESAERFSIENIIK 344 (348)
T ss_pred EEeCCCCHHHHHHHHHHHHcC----HHHHHHHHHHHHHHHHHhCHHHHHH
Confidence 9996 689999999999984 8999999999988777888776443
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. |
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-30 Score=256.62 Aligned_cols=273 Identities=19% Similarity=0.222 Sum_probs=202.4
Q ss_pred CCCCEEEEeCCCChhHHHHHHH---HHhhCCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhhhcCEEEEeC-H
Q 011969 100 ASPDVFLVQNPPSVPTLVAVKW---ASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVT-Q 175 (474)
Q Consensus 100 ~~~Dvi~~~~~~~~~~~~~~~~---~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS-~ 175 (474)
.+||+||++....+........ ..+..+.|+|++.|+.. ..... ....++++.+.+.+|.++|+| +
T Consensus 75 ~~~dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~-------~~~~~---~~~~~~~~~~~~~~d~ii~~s~~ 144 (366)
T cd03822 75 SGPDVVVIQHEYGIFGGEAGLYLLLLLRGLGIPVVVTLHTVL-------LHEPR---PGDRALLRLLLRRADAVIVMSSE 144 (366)
T ss_pred cCCCEEEEeeccccccchhhHHHHHHHhhcCCCEEEEEecCC-------ccccc---hhhhHHHHHHHhcCCEEEEeeHH
Confidence 7899999987322211111112 22347899999999971 11111 123466677788999999996 4
Q ss_pred HHHHHHHHHhCCceEEEeCCCC-CCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhccccccccc
Q 011969 176 AMQHELAQNWGIKATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFL 254 (474)
Q Consensus 176 ~~~~~l~~~~~~~~~vi~n~~~-~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (474)
..++.+...+..++.+++|+.+ ..+.+... . +...
T Consensus 145 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~--~----~~~~-------------------------------------- 180 (366)
T cd03822 145 LLRALLLRAYPEKIAVIPHGVPDPPAEPPES--L----KALG-------------------------------------- 180 (366)
T ss_pred HHHHHHhhcCCCcEEEeCCCCcCcccCCchh--h----Hhhc--------------------------------------
Confidence 4444444322356899999854 33322211 0 1111
Q ss_pred CCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCChHHHHH
Q 011969 255 KPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEE 334 (474)
Q Consensus 255 ~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~ 334 (474)
.......++|+|++.+.||++.+++|+..+.++ .++++|+|+|++........
T Consensus 181 ~~~~~~~i~~~G~~~~~K~~~~ll~a~~~~~~~---------------------------~~~~~l~i~G~~~~~~~~~~ 233 (366)
T cd03822 181 GLDGRPVLLTFGLLRPYKGLELLLEALPLLVAK---------------------------HPDVRLLVAGETHPDLERYR 233 (366)
T ss_pred CCCCCeEEEEEeeccCCCCHHHHHHHHHHHHhh---------------------------CCCeEEEEeccCccchhhhh
Confidence 122334899999999999999999999998773 68999999998865433222
Q ss_pred -----HHHHcCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCC--CCchHHHHHHhcCCcEEEeccccccccccc
Q 011969 335 -----KIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGL--DLPMKVVDMFGCGLPVCAVSYSCIEELVKV 406 (474)
Q Consensus 335 -----~~~~l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e--~~p~kv~Eama~G~PVia~~~~~~~e~v~~ 406 (474)
.++++++ ++|.|.|.|++.+++..+|+.||++++ |+..| ++|++++|||+||+|||+++.++ .+.+.+
T Consensus 234 ~~~~~~i~~~~~~~~v~~~~~~~~~~~~~~~~~~ad~~v~---ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~~~i~~ 309 (366)
T cd03822 234 GEAYALAERLGLADRVIFINRYLPDEELPELFSAADVVVL---PYRSADQTQSGVLAYAIGFGKPVISTPVGH-AEEVLD 309 (366)
T ss_pred hhhHhHHHhcCCCCcEEEecCcCCHHHHHHHHhhcCEEEe---cccccccccchHHHHHHHcCCCEEecCCCC-hheeee
Confidence 3788888 799999988999999999999999999 67777 99999999999999999999998 677778
Q ss_pred CCcEEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHH
Q 011969 407 DKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHA 461 (474)
Q Consensus 407 ~~~G~l~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ 461 (474)
+.+|++++ |+++++++|..++++ ++.++++++++++...+++|+...++..
T Consensus 310 ~~~g~~~~~~d~~~~~~~l~~l~~~----~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 362 (366)
T cd03822 310 GGTGLLVPPGDPAALAEAIRRLLAD----PELAQALRARAREYARAMSWERVAERYL 362 (366)
T ss_pred CCCcEEEcCCCHHHHHHHHHHHHcC----hHHHHHHHHHHHHHHhhCCHHHHHHHHH
Confidence 88999985 699999999999984 7889999999999887788877665543
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. |
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-30 Score=255.32 Aligned_cols=280 Identities=18% Similarity=0.217 Sum_probs=210.8
Q ss_pred cCCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCchHHH--HHHHHHHHHhhhcCEEEEeCHH
Q 011969 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVS--IYRWIEKYYGKMANGCLCVTQA 176 (474)
Q Consensus 99 ~~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~--~~~~~e~~~~~~ad~vi~vS~~ 176 (474)
..++|+||++++....... +....+..+.|++++.|+...... .....+.+ .....++...+.++.+++.|..
T Consensus 85 ~~~~dii~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~ 159 (375)
T cd03821 85 IREADIVHVHGLWSYPSLA-AARAARKYGIPYVVSPHGMLDPWA----LPHKALKKRLAWFLFERRLLQAAAAVHATSEQ 159 (375)
T ss_pred CCCCCEEEEecccchHHHH-HHHHHHHhCCCEEEEccccccccc----cccchhhhHHHHHHHHHHHHhcCCEEEECCHH
Confidence 3789999999865554443 333444578999999998732111 01222221 1234567777889999999987
Q ss_pred HHHHHHHHh-CCceEEEeCCCC-CCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhccccccccc
Q 011969 177 MQHELAQNW-GIKATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFL 254 (474)
Q Consensus 177 ~~~~l~~~~-~~~~~vi~n~~~-~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (474)
....+.... ..++.+++|+.+ +.|.+...... +..++ .
T Consensus 160 ~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~---~~~~~-------------------------------------~ 199 (375)
T cd03821 160 EAAEIRRLGLKAPIAVIPNGVDIPPFAALPSRGR---RRKFP-------------------------------------I 199 (375)
T ss_pred HHHHHHhhCCcccEEEcCCCcChhccCcchhhhh---hhhcc-------------------------------------C
Confidence 776665533 345899999854 44544321111 22222 1
Q ss_pred CCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCCh--HHH
Q 011969 255 KPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK--ESY 332 (474)
Q Consensus 255 ~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~--~~~ 332 (474)
+++...++|+|++.+.||++.+++|+..+.++ .++++|+|+|.++.. ..+
T Consensus 200 -~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~---------------------------~~~~~l~i~G~~~~~~~~~~ 251 (375)
T cd03821 200 -LPDKRIILFLGRLHPKKGLDLLIEAFAKLAER---------------------------FPDWHLVIAGPDEGGYRAEL 251 (375)
T ss_pred -CCCCcEEEEEeCcchhcCHHHHHHHHHHhhhh---------------------------cCCeEEEEECCCCcchHHHH
Confidence 23334899999999999999999999998773 689999999987543 445
Q ss_pred HHHHHHcCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecccccccccccCCcEE
Q 011969 333 EEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGL 411 (474)
Q Consensus 333 ~~~~~~l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~~~~e~v~~~~~G~ 411 (474)
+..++++++ ++|.|.|. ++.+++..+|+.||++++ +|..|++|++++|||+||+|||+++.++..+++.+ .+|+
T Consensus 252 ~~~~~~~~~~~~v~~~g~-~~~~~~~~~~~~adv~v~---ps~~e~~~~~~~Eama~G~PvI~~~~~~~~~~~~~-~~~~ 326 (375)
T cd03821 252 KQIAAALGLEDRVTFTGM-LYGEDKAAALADADLFVL---PSHSENFGIVVAEALACGTPVVTTDKVPWQELIEY-GCGW 326 (375)
T ss_pred HHHHHhcCccceEEEcCC-CChHHHHHHHhhCCEEEe---ccccCCCCcHHHHHHhcCCCEEEcCCCCHHHHhhc-CceE
Confidence 555578888 79999998 999999999999999999 67779999999999999999999999999999988 8999
Q ss_pred EeC-CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHh-ccccchHHHHHHH
Q 011969 412 LFS-SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEM-GLSARWATEWEEH 460 (474)
Q Consensus 412 l~~-~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~w~~~~~~~ 460 (474)
+++ +.++++++|..++++ ++.++++++++++. .+.++|+..-+++
T Consensus 327 ~~~~~~~~~~~~i~~l~~~----~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 373 (375)
T cd03821 327 VVDDDVDALAAALRRALEL----PQRLKAMGENGRALVEERFSWTAIAQQL 373 (375)
T ss_pred EeCCChHHHHHHHHHHHhC----HHHHHHHHHHHHHHHHHhcCHHHHHHHh
Confidence 987 579999999999995 78899999999987 5778887665543
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. |
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-29 Score=280.34 Aligned_cols=296 Identities=15% Similarity=0.163 Sum_probs=213.9
Q ss_pred CCCCEEEEeCCCChhHHHHHHHHHh------hCCCcEEEEecCchhhhhh----h-ccCC-CchH---HHH----HH--H
Q 011969 100 ASPDVFLVQNPPSVPTLVAVKWASS------LRRSAFIVDWHNFGYTLLS----L-SLGR-RSHF---VSI----YR--W 158 (474)
Q Consensus 100 ~~~Dvi~~~~~~~~~~~~~~~~~~~------~~~~~~i~~~h~~~~~~~~----~-~~~~-~~~~---~~~----~~--~ 158 (474)
.+|||||+|+.. +.+++-++.. +.++|+|+++||+.|.-.. . ..+- ...+ ..+ +. .
T Consensus 609 ~~PDIIH~HDW~---TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~l~~~d~le~~~~~~iN 685 (977)
T PLN02939 609 KKPDIIHCHDWQ---TAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGLDVHQLDRPDRMQDNAHGRIN 685 (977)
T ss_pred CCCCEEEECCcc---HHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHHccChhhhhhccCCchH
Confidence 689999999954 3332111111 3568999999998642210 0 0000 0000 000 00 1
Q ss_pred HHHHHhhhcCEEEEeCHHHHHHHHHHhC-----------CceEEEeCCC-CCCCCCCChH----------------HHHH
Q 011969 159 IEKYYGKMANGCLCVTQAMQHELAQNWG-----------IKATVLYDQP-PEFFHPTSLE----------------EKHE 210 (474)
Q Consensus 159 ~e~~~~~~ad~vi~vS~~~~~~l~~~~~-----------~~~~vi~n~~-~~~f~~~~~~----------------~~~~ 210 (474)
+-+....+||.|++||+..++++...+| .++.+|+||. .+.|.|.... .+..
T Consensus 686 ~LK~GIv~AD~VtTVSptYA~EI~te~G~GL~~~L~~~~~Kl~gIlNGID~e~wnPatD~~L~~~Ys~~dl~GK~~nK~a 765 (977)
T PLN02939 686 VVKGAIVYSNIVTTVSPTYAQEVRSEGGRGLQDTLKFHSKKFVGILNGIDTDTWNPSTDRFLKVQYNANDLQGKAANKAA 765 (977)
T ss_pred HHHHHHHhCCeeEeeeHHHHHHHHHHhccchHHHhccccCCceEEecceehhhcCCccccccccccChhhhhhhhhhhHH
Confidence 1122334799999999999999876332 2378999994 4677775321 2445
Q ss_pred HHHhhhhccCCCCCccccccccccCCcCcchhhhhcccccccccCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhh
Q 011969 211 LFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAA 290 (474)
Q Consensus 211 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~ 290 (474)
+++++|+ +++ .++.| +++++||+.+.||++.+++|+..+.+
T Consensus 766 LRkelGL------~~~----------------------------d~d~p-LIg~VGRL~~QKGiDlLleA~~~Ll~---- 806 (977)
T PLN02939 766 LRKQLGL------SSA----------------------------DASQP-LVGCITRLVPQKGVHLIRHAIYKTAE---- 806 (977)
T ss_pred HHHHhCC------Ccc----------------------------cccce-EEEEeecCCcccChHHHHHHHHHHhh----
Confidence 5666661 000 02344 89999999999999999999987754
Q ss_pred hhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCCh---HHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcccEE
Q 011969 291 ILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK---ESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLG 366 (474)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~---~~~~~~~~~l~l-~~V~f~g~~v~~~~~~~~l~~adv~ 366 (474)
++++|+|+|+|++. +.+++.+++++. ++|.|+|. .+.+....+|+.||++
T Consensus 807 -------------------------~dvqLVIvGdGp~~~~e~eL~~La~~l~l~drV~FlG~-~de~lah~IYAaADIF 860 (977)
T PLN02939 807 -------------------------LGGQFVLLGSSPVPHIQREFEGIADQFQSNNNIRLILK-YDEALSHSIYAASDMF 860 (977)
T ss_pred -------------------------cCCEEEEEeCCCcHHHHHHHHHHHHHcCCCCeEEEEec-cCHHHHHHHHHhCCEE
Confidence 46899999999763 567888888887 68999998 7777778999999999
Q ss_pred EeeccCCCCCCCchHHHHHHhcCCcEEEeccccccccccc---------CCcEEEeC--CHHHHHHHHHHHHhCCCCCHH
Q 011969 367 VCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKV---------DKNGLLFS--SSSELADQLLMLFKGFPDDSD 435 (474)
Q Consensus 367 v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~~~~e~v~~---------~~~G~l~~--~~~~la~~i~~l~~~~~~~~~ 435 (474)
|+ ||..|+||++++|||+||+|+|+++.||+.|+|.+ +.+|++++ |+++++++|.++++.+..+++
T Consensus 861 Lm---PSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe 937 (977)
T PLN02939 861 II---PSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPE 937 (977)
T ss_pred EE---CCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCHH
Confidence 99 78899999999999999999999999999999865 47999996 799999999998875545789
Q ss_pred HHHHHHHHHHHhccccchHHHHHHHHHHHHHHHh
Q 011969 436 VLKKLRNGTLEMGLSARWATEWEEHAKPLITEVI 469 (474)
Q Consensus 436 ~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 469 (474)
.+++|++++.+ ..++|+...+++. .+++++.
T Consensus 938 ~~~~L~~~am~--~dFSWe~~A~qYe-eLY~~ll 968 (977)
T PLN02939 938 VWKQLVQKDMN--IDFSWDSSASQYE-ELYQRAV 968 (977)
T ss_pred HHHHHHHHHHH--hcCCHHHHHHHHH-HHHHHHH
Confidence 99999988754 4789988776643 4555543
|
|
| >TIGR02470 sucr_synth sucrose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-29 Score=279.59 Aligned_cols=363 Identities=15% Similarity=0.106 Sum_probs=238.1
Q ss_pred HHhhCCC----eEEEEecCCCCC--------CcceeccCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHHH-HHHH
Q 011969 28 LARQMSL----EVDVVAYGGSKP--------HAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFM-LLWF 94 (474)
Q Consensus 28 l~~~~g~----eV~Vv~~~~~~~--------~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 94 (474)
|+++ || +|+|+|-..... ...+...+|+++.++|..+..+.-++++..... ++..+..+.. +.-.
T Consensus 300 La~~-G~~v~~~V~I~TR~~~~~~~~~~~~~~e~~~~~~~~~I~rvp~g~~~~~~~~~~i~k~~-l~p~l~~f~~~~~~~ 377 (784)
T TIGR02470 300 IKLQ-GLEITPKILIVTRLIPDAEGTTCNQRLEKVYGTEHAWILRVPFRTENGIILRNWISRFE-IWPYLETFAEDAEKE 377 (784)
T ss_pred HHhc-CCCccceEEEEecCCCCccccccccccccccCCCceEEEEecCCCCcccccccccCHHH-HHHHHHHHHHHHHHH
Confidence 4564 99 778999543211 112333569999999832211111122111111 1111111111 1111
Q ss_pred Hhhh-cCCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCchH---HHHHH--HHHHHHhhhcC
Q 011969 95 LCVK-IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHF---VSIYR--WIEKYYGKMAN 168 (474)
Q Consensus 95 ~~~~-~~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~---~~~~~--~~e~~~~~~ad 168 (474)
+... ..+||+||+|. ..+.+++..+++..++|++.+.|.++.......-...... ..+.. ..|..+...||
T Consensus 378 ~~~~~~~~pDlIHahy---~d~glva~lla~~lgVP~v~t~HsL~~~K~~~~g~~~~~~e~~~~~~~r~~ae~~~~~~AD 454 (784)
T TIGR02470 378 ILAELQGKPDLIIGNY---SDGNLVASLLARKLGVTQCTIAHALEKTKYPDSDIYWQEFEDKYHFSCQFTADLIAMNAAD 454 (784)
T ss_pred HHHhcCCCCCEEEECC---CchHHHHHHHHHhcCCCEEEECCcchhhcccccccccccchhHHHhhhhhhHHHHHHhcCC
Confidence 1111 25799999998 5566678888999999999999988532211000001101 01111 22667788999
Q ss_pred EEEEeCHHHHHH----HHHH-----------h----C-----CceEEEeCCC-CCCCCCCChHHHH--HH----------
Q 011969 169 GCLCVTQAMQHE----LAQN-----------W----G-----IKATVLYDQP-PEFFHPTSLEEKH--EL---------- 211 (474)
Q Consensus 169 ~vi~vS~~~~~~----l~~~-----------~----~-----~~~~vi~n~~-~~~f~~~~~~~~~--~~---------- 211 (474)
.||+.|...... +.+. + | .++.++++|. .+.|.|.+...+. .+
T Consensus 455 ~IItsT~qEi~~~~~~v~qY~s~~~ft~p~Ly~vvnGid~~~~Ki~VVpPGVD~~iF~P~~~~~~r~~~~~~~ie~ll~~ 534 (784)
T TIGR02470 455 FIITSTYQEIAGTKDSVGQYESHQAFTMPGLYRVVHGIDVFDPKFNIVSPGADESIYFPYSDKEKRLTNLHPEIEELLFS 534 (784)
T ss_pred EEEECcHHHhhhhhhhhhhhhhcccccccceeeeecCccCCcCCeEEECCCcChhhcCCCCchhhhhhhhhcchhhhccc
Confidence 999999755331 1110 1 1 2367888884 4667666432211 01
Q ss_pred ----HHhhhhccCCCCCccccccccccCCcCcchhhhhcccccccccCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHH
Q 011969 212 ----FCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRR 287 (474)
Q Consensus 212 ----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~ 287 (474)
.+.+| +...+++| +|+++||+.+.||++.|++|+..+...
T Consensus 535 ~~~~~~~~G-----------------------------------~l~d~~kp-iIl~VGRL~~~KGid~LIeA~~~l~~l 578 (784)
T TIGR02470 535 LEDNDEHYG-----------------------------------YLKDPNKP-IIFSMARLDRVKNLTGLVECYGRSPKL 578 (784)
T ss_pred hhhHHHHhC-----------------------------------CCCCCCCc-EEEEEeCCCccCCHHHHHHHHHHhHhh
Confidence 11122 01134556 889999999999999999999887542
Q ss_pred HhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCC------------hHHHHHHHHHcCC-CcEEEecCCCCcc
Q 011969 288 VAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD------------KESYEEKIRRLRL-KRVAFRTMWLSAE 354 (474)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~------------~~~~~~~~~~l~l-~~V~f~g~~v~~~ 354 (474)
.++++|+|+|++++ .+++.+.++++++ ++|.|+|...+..
T Consensus 579 ---------------------------~~~~~LVIVGGg~~~~~s~d~ee~~~i~~L~~la~~~gL~g~V~flG~~~~~~ 631 (784)
T TIGR02470 579 ---------------------------RELVNLVVVAGKLDAKESKDREEQAEIEKMHNLIDQYQLHGQIRWIGAQLNRV 631 (784)
T ss_pred ---------------------------CCCeEEEEEeCCcccccccchhHHHHHHHHHHHHHHhCCCCeEEEccCcCCcc
Confidence 45789999998753 1356677889998 7999999734667
Q ss_pred cHHHHHh----cccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecccccccccccCCcEEEeC--CHHHHHHHHHHHHh
Q 011969 355 DYPLLLG----SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFS--SSSELADQLLMLFK 428 (474)
Q Consensus 355 ~~~~~l~----~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~~~~e~v~~~~~G~l~~--~~~~la~~i~~l~~ 428 (474)
+...+|+ .+|++|+ ||..|+||++++||||||+|||+|+.||+.|+|.++.+|++++ |+++++++|.++++
T Consensus 632 ~~~elyr~iAd~adVfV~---PS~~EpFGLvvLEAMAcGlPVVAT~~GG~~EiV~dg~tGfLVdp~D~eaLA~aL~~ll~ 708 (784)
T TIGR02470 632 RNGELYRYIADTKGIFVQ---PALYEAFGLTVLEAMTCGLPTFATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDFFE 708 (784)
T ss_pred cHHHHHHHhhccCcEEEE---CCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHH
Confidence 7767665 3479999 7899999999999999999999999999999999999999997 69999999999875
Q ss_pred CCCCCHHHHHHHHHHHHHhc-cccchHHHHHHHH
Q 011969 429 GFPDDSDVLKKLRNGTLEMG-LSARWATEWEEHA 461 (474)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~~~~~ 461 (474)
....|++.+++|++++++.+ +.|+|+...++++
T Consensus 709 kll~dp~~~~~ms~~a~~rV~~~FSW~~~A~~ll 742 (784)
T TIGR02470 709 KCDEDPSYWQKISQGGLQRIYEKYTWKIYSERLL 742 (784)
T ss_pred HhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 32236899999999998864 6798887766643
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria. |
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-29 Score=269.66 Aligned_cols=288 Identities=17% Similarity=0.110 Sum_probs=209.2
Q ss_pred cCCCCEEEEeCCCChhHHHHHHHHHhh------CCCcEEEEecCchhhhh------hhccCCC-chHH------HHHHHH
Q 011969 99 IASPDVFLVQNPPSVPTLVAVKWASSL------RRSAFIVDWHNFGYTLL------SLSLGRR-SHFV------SIYRWI 159 (474)
Q Consensus 99 ~~~~Dvi~~~~~~~~~~~~~~~~~~~~------~~~~~i~~~h~~~~~~~------~~~~~~~-~~~~------~~~~~~ 159 (474)
..+||+||+|+. .+.+++.+++.. .++|+|+++|++.+... ....... ..+. .....+
T Consensus 127 ~~~pDviH~hd~---~t~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (476)
T cd03791 127 GWKPDIIHCHDW---HTGLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEELFHIDGLEFYGQVNF 203 (476)
T ss_pred CCCCcEEEECch---HHHHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccchhhhcccccCCcccH
Confidence 378999999994 344444444443 48999999999853110 0000000 0000 001256
Q ss_pred HHHHhhhcCEEEEeCHHHHHHHHHH------------hCCceEEEeCCC-CCCCCCCChH----------------HHHH
Q 011969 160 EKYYGKMANGCLCVTQAMQHELAQN------------WGIKATVLYDQP-PEFFHPTSLE----------------EKHE 210 (474)
Q Consensus 160 e~~~~~~ad~vi~vS~~~~~~l~~~------------~~~~~~vi~n~~-~~~f~~~~~~----------------~~~~ 210 (474)
++..++.||.++++|+..++++.+. ...++.+|+||. .+.|.|.... .+..
T Consensus 204 ~~~~~~~ad~v~~vS~~~~~~i~~~~~~~gl~~~~~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~~~~~k~~ 283 (476)
T cd03791 204 LKAGIVYADAVTTVSPTYAREILTPEFGEGLDGLLRARAGKLSGILNGIDYDVWNPATDPHLPANYSADDLEGKAENKAA 283 (476)
T ss_pred HHHHHHhcCcCeecCHhHHHHhCCCCCCcchHHHHHhccCCeEEEeCCCcCcccCccccchhhhcCCccccccHHHHHHH
Confidence 7788899999999999999887531 134589999995 4666664321 1233
Q ss_pred HHHhhhhccCCCCCccccccccccCCcCcchhhhhcccccccccCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhh
Q 011969 211 LFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAA 290 (474)
Q Consensus 211 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~ 290 (474)
+++++|. ...++.+ +++|+|++.+.||++.+++++..+.+
T Consensus 284 l~~~~g~-----------------------------------~~~~~~~-~i~~vGrl~~~Kg~~~li~a~~~l~~---- 323 (476)
T cd03791 284 LQEELGL-----------------------------------PVDPDAP-LFGFVGRLTEQKGIDLLLEALPELLE---- 323 (476)
T ss_pred HHHHcCC-----------------------------------CcCCCCC-EEEEEeeccccccHHHHHHHHHHHHH----
Confidence 4445441 0123444 89999999999999999999999876
Q ss_pred hhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCCh--HHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcccEEEe
Q 011969 291 ILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK--ESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVC 368 (474)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~--~~~~~~~~~l~l~~V~f~g~~v~~~~~~~~l~~adv~v~ 368 (474)
.+++|+|+|+|+.. +.+++.++++ .+++.|.+. .+.+++..+|+.||++++
T Consensus 324 -------------------------~~~~lvi~G~g~~~~~~~~~~~~~~~-~~~v~~~~~-~~~~~~~~~~~~aDv~l~ 376 (476)
T cd03791 324 -------------------------LGGQLVILGSGDPEYEEALRELAARY-PGRVAVLIG-YDEALAHLIYAGADFFLM 376 (476)
T ss_pred -------------------------cCcEEEEEecCCHHHHHHHHHHHHhC-CCcEEEEEe-CCHHHHHHHHHhCCEEEC
Confidence 24899999998642 4556666655 468888777 667788899999999999
Q ss_pred eccCCCCCCCchHHHHHHhcCCcEEEecccccccccccCC------cEEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHH
Q 011969 369 LHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDK------NGLLFS--SSSELADQLLMLFKGFPDDSDVLKKL 440 (474)
Q Consensus 369 ~~~~s~~e~~p~kv~Eama~G~PVia~~~~~~~e~v~~~~------~G~l~~--~~~~la~~i~~l~~~~~~~~~~~~~~ 440 (474)
||..|++|++++|||+||+|||+++.+++.|+|.++. +|++++ |+++++++|.++++.+. +++.++++
T Consensus 377 ---pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~~~~~l~~~i~~~l~~~~-~~~~~~~~ 452 (476)
T cd03791 377 ---PSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGEGTGFVFEGYNADALLAALRRALALYR-DPEAWRKL 452 (476)
T ss_pred ---CCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCCCCeEEeCCCCHHHHHHHHHHHHHHHc-CHHHHHHH
Confidence 6888999999999999999999999999999999887 999996 69999999999887432 47888888
Q ss_pred HHHHHHhccccchHHHHHHHHH
Q 011969 441 RNGTLEMGLSARWATEWEEHAK 462 (474)
Q Consensus 441 ~~~~~~~~~~~~w~~~~~~~~~ 462 (474)
++++.+ ..++|+...+++.+
T Consensus 453 ~~~~~~--~~fsw~~~a~~~~~ 472 (476)
T cd03791 453 QRNAMA--QDFSWDRSAKEYLE 472 (476)
T ss_pred HHHHhc--cCCChHHHHHHHHH
Confidence 888865 35777776655543
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| >PRK14099 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-29 Score=267.95 Aligned_cols=290 Identities=16% Similarity=0.155 Sum_probs=209.2
Q ss_pred CCCCEEEEeCCCChhHHHHHHHHHh--hCCCcEEEEecCchhhhhh-----hccCC-CchHH----HHH--HHHHHHHhh
Q 011969 100 ASPDVFLVQNPPSVPTLVAVKWASS--LRRSAFIVDWHNFGYTLLS-----LSLGR-RSHFV----SIY--RWIEKYYGK 165 (474)
Q Consensus 100 ~~~Dvi~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~h~~~~~~~~-----~~~~~-~~~~~----~~~--~~~e~~~~~ 165 (474)
.+|||||+|+ +.+.++..+++. ..++|+|+|+|+..+.... ...+. ...+. ..+ ..+.+...+
T Consensus 132 ~~pDIiH~Hd---w~~~l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~ 208 (485)
T PRK14099 132 FVPDIVHAHD---WQAGLAPAYLHYSGRPAPGTVFTIHNLAFQGQFPRELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQ 208 (485)
T ss_pred CCCCEEEECC---cHHHHHHHHHHhCCCCCCCEEEeCCCCCCCCcCCHHHHHHcCCChHHcCchhhhhCCCccHHHHHHH
Confidence 6899999999 444444444443 2357999999998542100 00000 00000 000 023566778
Q ss_pred hcCEEEEeCHHHHHHHHHHh------------CCceEEEeCCCC-CCCCCCChH----------------HHHHHHHhhh
Q 011969 166 MANGCLCVTQAMQHELAQNW------------GIKATVLYDQPP-EFFHPTSLE----------------EKHELFCRLN 216 (474)
Q Consensus 166 ~ad~vi~vS~~~~~~l~~~~------------~~~~~vi~n~~~-~~f~~~~~~----------------~~~~~~~~l~ 216 (474)
.||.|+++|+..++++.+.+ ..++.+|+||.+ +.|.|.... .+..+++++|
T Consensus 209 ~ad~vitVS~~~a~ei~~~~~g~gl~~~l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~g 288 (485)
T PRK14099 209 LADRITTVSPTYALEIQGPEAGMGLDGLLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKAALQARFG 288 (485)
T ss_pred hcCeeeecChhHHHHHhcccCCcChHHHHHhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHHhHHHHHHHcC
Confidence 99999999999999987532 234899999954 667775421 1234555555
Q ss_pred hccCCCCCccccccccccCCcCcchhhhhcccccccccCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCC
Q 011969 217 KILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDD 296 (474)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~ 296 (474)
+ ...++.+ +++++||+.++||++.|++|+..+.+
T Consensus 289 l-----------------------------------~~~~~~~-li~~VgRL~~~KG~d~Li~A~~~l~~---------- 322 (485)
T PRK14099 289 L-----------------------------------DPDPDAL-LLGVISRLSWQKGLDLLLEALPTLLG---------- 322 (485)
T ss_pred C-----------------------------------CcccCCc-EEEEEecCCccccHHHHHHHHHHHHh----------
Confidence 1 0012233 88899999999999999999998765
Q ss_pred CchhhHhHhhhcCCccccCCCEEEEEEeCCCC--hHHHHHHHHHcCCCcEEEecCCCCcccHHHHH-hcccEEEeeccCC
Q 011969 297 STNEEVFLKEISDGKQYLYPRLLFIITGKGPD--KESYEEKIRRLRLKRVAFRTMWLSAEDYPLLL-GSADLGVCLHTSS 373 (474)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~--~~~~~~~~~~l~l~~V~f~g~~v~~~~~~~~l-~~adv~v~~~~~s 373 (474)
.+++|+|+|+|+. ++.+++.+++++.+.+.|+|. .+++..+| ..||++|+ ||
T Consensus 323 -------------------~~~~lvivG~G~~~~~~~l~~l~~~~~~~v~~~~G~---~~~l~~~~~a~aDifv~---PS 377 (485)
T PRK14099 323 -------------------EGAQLALLGSGDAELEARFRAAAQAYPGQIGVVIGY---DEALAHLIQAGADALLV---PS 377 (485)
T ss_pred -------------------cCcEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCC---CHHHHHHHHhcCCEEEE---CC
Confidence 3689999999864 566777777765333468887 78999887 47999999 68
Q ss_pred CCCCCchHHHHHHhcCCcEEEecccccccccccC---------CcEEEeC--CHHHHHHHHHH---HHhCCCCCHHHHHH
Q 011969 374 SGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVD---------KNGLLFS--SSSELADQLLM---LFKGFPDDSDVLKK 439 (474)
Q Consensus 374 ~~e~~p~kv~Eama~G~PVia~~~~~~~e~v~~~---------~~G~l~~--~~~~la~~i~~---l~~~~~~~~~~~~~ 439 (474)
..|+||++.+|||+||+|+|+++.||+.|+|.++ .+|++++ |+++|+++|.+ +++ |++.+++
T Consensus 378 ~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~~d~~~La~ai~~a~~l~~----d~~~~~~ 453 (485)
T PRK14099 378 RFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQFSPVTADALAAALRKTAALFA----DPVAWRR 453 (485)
T ss_pred ccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEeCCCCHHHHHHHHHHHHHHhc----CHHHHHH
Confidence 8999999999999999988889999999998775 6899996 79999999997 454 5888999
Q ss_pred HHHHHHHhccccchHHHHHHHHHHHHHHHhh
Q 011969 440 LRNGTLEMGLSARWATEWEEHAKPLITEVIS 470 (474)
Q Consensus 440 ~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~ 470 (474)
|++++++ +.++|+...+++ ..+++++..
T Consensus 454 l~~~~~~--~~fSw~~~a~~y-~~lY~~l~~ 481 (485)
T PRK14099 454 LQRNGMT--TDVSWRNPAQHY-AALYRSLVA 481 (485)
T ss_pred HHHHhhh--hcCChHHHHHHH-HHHHHHHHh
Confidence 9999874 479999887775 455565543
|
|
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-30 Score=264.29 Aligned_cols=273 Identities=14% Similarity=0.163 Sum_probs=201.2
Q ss_pred cCCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhhhcCEEEEeCHHHH
Q 011969 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178 (474)
Q Consensus 99 ~~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~ 178 (474)
..+||+||+|++.. .. ...+++..+.|+|+++|.... ... ....+++ +.+.+.+|.+++.|..
T Consensus 83 ~~~~Dvv~~h~~~~--~~--~~~~~~~~~~~~i~~~H~~~~--------~~~--~~~~~~~-~~~~~~~d~~i~~~~~-- 145 (372)
T cd03792 83 DLDADVVVIHDPQP--LA--LPLFKKKRGRPWIWRCHIDLS--------SPN--RRVWDFL-QPYIEDYDAAVFHLPE-- 145 (372)
T ss_pred cCCCCEEEECCCCc--hh--HHHhhhcCCCeEEEEeeeecC--------CCc--HHHHHHH-HHHHHhCCEEeecHHH--
Confidence 36899999998752 22 222333447899999997621 111 1222233 4556779998888832
Q ss_pred HHHHHHhCCceEEEeCCCCCC--CC-CCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhcccccccccC
Q 011969 179 HELAQNWGIKATVLYDQPPEF--FH-PTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLK 255 (474)
Q Consensus 179 ~~l~~~~~~~~~vi~n~~~~~--f~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (474)
++....+.+..+++|+.+.. +. +.+......++++++ +.
T Consensus 146 -~~~~~~~~~~~vipngvd~~~~~~~~~~~~~~~~~~~~~~-------------------------------------~~ 187 (372)
T cd03792 146 -YVPPQVPPRKVIIPPSIDPLSGKNRELSPADIEYILEKYG-------------------------------------ID 187 (372)
T ss_pred -hcCCCCCCceEEeCCCCCCCccccCCCCHHHHHHHHHHhC-------------------------------------CC
Confidence 23332233344999985421 21 222233445555555 23
Q ss_pred CCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCCh-----H
Q 011969 256 PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK-----E 330 (474)
Q Consensus 256 ~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~-----~ 330 (474)
++.+ +++++||+.+.||++.+++|++.+.++ .|+++|+|+|+|+.. +
T Consensus 188 ~~~~-~i~~vgrl~~~Kg~~~ll~a~~~l~~~---------------------------~~~~~l~i~G~g~~~~~~~~~ 239 (372)
T cd03792 188 PERP-YITQVSRFDPWKDPFGVIDAYRKVKER---------------------------VPDPQLVLVGSGATDDPEGWI 239 (372)
T ss_pred CCCc-EEEEEeccccccCcHHHHHHHHHHHhh---------------------------CCCCEEEEEeCCCCCCchhHH
Confidence 4444 899999999999999999999998763 578999999998652 2
Q ss_pred HHHHHHHHcCC-CcEEEecCC-CCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecccccccccccCC
Q 011969 331 SYEEKIRRLRL-KRVAFRTMW-LSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDK 408 (474)
Q Consensus 331 ~~~~~~~~l~l-~~V~f~g~~-v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~~~~e~v~~~~ 408 (474)
.+++..+..++ ++|.|.|.. ++.+++..+|+.||++++ +|..|+||++++||||||+|||+++.++..+++.++.
T Consensus 240 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ad~~v~---~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~~~~~i~~~~ 316 (372)
T cd03792 240 VYEEVLEYAEGDPDIHVLTLPPVSDLEVNALQRASTVVLQ---KSIREGFGLTVTEALWKGKPVIAGPVGGIPLQIEDGE 316 (372)
T ss_pred HHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHhCeEEEe---CCCccCCCHHHHHHHHcCCCEEEcCCCCchhhcccCC
Confidence 24455545666 689999872 288999999999999999 7889999999999999999999999999999999999
Q ss_pred cEEEeCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc-cccchHHHHHHHH
Q 011969 409 NGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARWATEWEEHA 461 (474)
Q Consensus 409 ~G~l~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~~~~~ 461 (474)
+|+++++.++++++|.+++++ ++.+++|++++++.. +.++|+...+++.
T Consensus 317 ~g~~~~~~~~~a~~i~~ll~~----~~~~~~~~~~a~~~~~~~~s~~~~~~~~~ 366 (372)
T cd03792 317 TGFLVDTVEEAAVRILYLLRD----PELRRKMGANAREHVRENFLITRHLKDYL 366 (372)
T ss_pred ceEEeCCcHHHHHHHHHHHcC----HHHHHHHHHHHHHHHHHHcCHHHHHHHHH
Confidence 999999999999999999984 888999999998865 5788887665544
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. |
| >PLN02846 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.6e-29 Score=265.14 Aligned_cols=354 Identities=13% Similarity=0.104 Sum_probs=225.7
Q ss_pred CCCCceEEEEEeCCC---CC-CchHHHHHHHHHhhCC-CeEEEEecCCCCCCc------------------ceeccCCeE
Q 011969 1 MGRRGRACVVVLGDL---GR-SPRMQYQALSLARQMS-LEVDVVAYGGSKPHA------------------AILEHPSIH 57 (474)
Q Consensus 1 m~~~~~~~i~~~~~~---g~-~~r~~~~a~~l~~~~g-~eV~Vv~~~~~~~~~------------------~~~~~~gi~ 57 (474)
|.++.+++|+....+ +| +--....+..|+++ | |+|+||++....... .+.+..+-+
T Consensus 1 ~~~~mrIaivTdt~lP~vnGva~s~~~~a~~L~~~-G~heV~vvaP~~~~~~~~~~~~~~~~f~~~~~~e~~~~~~~~~~ 79 (462)
T PLN02846 1 MQKKQHIAIFTTASLPWMTGTAVNPLFRAAYLAKD-GDREVTLVIPWLSLKDQKLVYPNKITFSSPSEQEAYVRQWLEER 79 (462)
T ss_pred CCCCCEEEEEEcCCCCCCCCeeccHHHHHHHHHhc-CCcEEEEEecCCccccccccccccccccCchhhhhhhhhhccCe
Confidence 566677888888654 33 24455667788886 9 799999975321100 000111334
Q ss_pred EEEeecCCCCCCCC-----CchhHHHHHHHHHHHHHHHHHHHHhhhcCCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEE
Q 011969 58 IHTMTQWPTIPRGL-----PKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIV 132 (474)
Q Consensus 58 i~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~ 132 (474)
+.+++..+.+.+.- .+.......+.+.+ +..+||+||+++|..+...-.+...++..+. +|.
T Consensus 80 v~r~~s~~~p~yp~r~~~~~r~~~~~~~i~~~l------------~~~~pDVIHv~tP~~LG~~~~g~~~~~k~~~-vV~ 146 (462)
T PLN02846 80 ISFLPKFSIKFYPGKFSTDKRSILPVGDISETI------------PDEEADIAVLEEPEHLTWYHHGKRWKTKFRL-VIG 146 (462)
T ss_pred EEEecccccccCcccccccccccCChHHHHHHH------------HhcCCCEEEEcCchhhhhHHHHHHHHhcCCc-EEE
Confidence 45555332211111 01000111122222 2278999999998655432112333333344 777
Q ss_pred EecCchhhhhhhccCCCchH-HHHHHHHHHHHhh-hcCEEEEeCHHHHHHHHHHhCCceEEEeCC-CCCCCCCCChHHHH
Q 011969 133 DWHNFGYTLLSLSLGRRSHF-VSIYRWIEKYYGK-MANGCLCVTQAMQHELAQNWGIKATVLYDQ-PPEFFHPTSLEEKH 209 (474)
Q Consensus 133 ~~h~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~-~ad~vi~vS~~~~~~l~~~~~~~~~vi~n~-~~~~f~~~~~~~~~ 209 (474)
++|.....+.. ....... ..+.+.+.+++.+ .+|.+++.|..+++ +.+. .....+| +.++|++....
T Consensus 147 tyHT~y~~Y~~--~~~~g~~~~~l~~~~~~~~~r~~~d~vi~pS~~~~~-l~~~----~i~~v~GVd~~~f~~~~~~--- 216 (462)
T PLN02846 147 IVHTNYLEYVK--REKNGRVKAFLLKYINSWVVDIYCHKVIRLSAATQD-YPRS----IICNVHGVNPKFLEIGKLK--- 216 (462)
T ss_pred EECCChHHHHH--HhccchHHHHHHHHHHHHHHHHhcCEEEccCHHHHH-HhhC----EEecCceechhhcCCCccc---
Confidence 89985222221 1111111 2233344444433 38999999997776 4432 2223356 44667655221
Q ss_pred HHHHhhhhccCCCCCccccccccccCCcCcchhhhhcccccccccCCCC-CeEEEEEeecccCCCHHHHHHHHHHhHHHH
Q 011969 210 ELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKPNR-PALVVSSTSWTPDEDFGILLEAALMYDRRV 288 (474)
Q Consensus 210 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~ 288 (474)
..+..+ ..+. ...++|+||+.+.||++.|++|++.+.+.
T Consensus 217 -~~~~~~--------------------------------------~~~~~~~~~l~vGRL~~eK~~~~Li~a~~~l~~~- 256 (462)
T PLN02846 217 -LEQQKN--------------------------------------GEQAFTKGAYYIGKMVWSKGYKELLKLLHKHQKE- 256 (462)
T ss_pred -HhhhcC--------------------------------------CCCCcceEEEEEecCcccCCHHHHHHHHHHHHhh-
Confidence 111100 0111 12689999999999999999999988763
Q ss_pred hhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcccEEEe
Q 011969 289 AAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVC 368 (474)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~~~l~l~~V~f~g~~v~~~~~~~~l~~adv~v~ 368 (474)
.|+++|+|+|+||+++++++.+++++++...|.|. .+...+|..+|+||+
T Consensus 257 --------------------------~~~~~l~ivGdGp~~~~L~~~a~~l~l~~~vf~G~----~~~~~~~~~~DvFv~ 306 (462)
T PLN02846 257 --------------------------LSGLEVDLYGSGEDSDEVKAAAEKLELDVRVYPGR----DHADPLFHDYKVFLN 306 (462)
T ss_pred --------------------------CCCeEEEEECCCccHHHHHHHHHhcCCcEEEECCC----CCHHHHHHhCCEEEE
Confidence 58899999999999999999999999853336665 344579999999999
Q ss_pred eccCCCCCCCchHHHHHHhcCCcEEEecccccccccccCCcEEEeCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc
Q 011969 369 LHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG 448 (474)
Q Consensus 369 ~~~~s~~e~~p~kv~Eama~G~PVia~~~~~~~e~v~~~~~G~l~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~ 448 (474)
+|..|++|++++||||||+|||+++.++ .+++.++.+|+.++|.+++++++..++.+ ++ ++++..+++
T Consensus 307 ---pS~~Et~g~v~lEAmA~G~PVVa~~~~~-~~~v~~~~ng~~~~~~~~~a~ai~~~l~~---~~---~~~~~~a~~-- 374 (462)
T PLN02846 307 ---PSTTDVVCTTTAEALAMGKIVVCANHPS-NEFFKQFPNCRTYDDGKGFVRATLKALAE---EP---APLTDAQRH-- 374 (462)
T ss_pred ---CCCcccchHHHHHHHHcCCcEEEecCCC-cceeecCCceEecCCHHHHHHHHHHHHcc---Cc---hhHHHHHHH--
Confidence 7899999999999999999999999887 59999999999999999999999999985 22 233344443
Q ss_pred cccchHHHHHHHH
Q 011969 449 LSARWATEWEEHA 461 (474)
Q Consensus 449 ~~~~w~~~~~~~~ 461 (474)
.++|+...++.+
T Consensus 375 -~~SWe~~~~~l~ 386 (462)
T PLN02846 375 -ELSWEAATERFL 386 (462)
T ss_pred -hCCHHHHHHHHH
Confidence 677776665543
|
|
| >PLN02949 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.98 E-value=2e-29 Score=267.92 Aligned_cols=230 Identities=18% Similarity=0.249 Sum_probs=183.2
Q ss_pred HHHHHHHhhhcCEEEEeCHHHHHHHHHHhCC--ceEEEeCCCC-CCCCCCChHHHHHHHHhhhhccCCCCCccccccccc
Q 011969 157 RWIEKYYGKMANGCLCVTQAMQHELAQNWGI--KATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAG 233 (474)
Q Consensus 157 ~~~e~~~~~~ad~vi~vS~~~~~~l~~~~~~--~~~vi~n~~~-~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 233 (474)
.++++...+.||.++|.|+.+++.+.+.++. ++.++|++.+ +.+...+.
T Consensus 211 ~~l~~~~~~~ad~ii~nS~~t~~~l~~~~~~~~~i~vvyp~vd~~~~~~~~~---------------------------- 262 (463)
T PLN02949 211 AWMYGLVGRCAHLAMVNSSWTKSHIEALWRIPERIKRVYPPCDTSGLQALPL---------------------------- 262 (463)
T ss_pred HHHHHHHcCCCCEEEECCHHHHHHHHHHcCCCCCeEEEcCCCCHHHcccCCc----------------------------
Confidence 3456666789999999999999999887765 3678888743 22211100
Q ss_pred cCCcCcchhhhhcccccccccCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccc
Q 011969 234 MEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQY 313 (474)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (474)
....+.+ .++++|++.+.||++.+|+|+..+.+++. .
T Consensus 263 -------------------~~~~~~~-~il~vGR~~~~Kg~~llI~A~~~l~~~~~-----------------------~ 299 (463)
T PLN02949 263 -------------------ERSEDPP-YIISVAQFRPEKAHALQLEAFALALEKLD-----------------------A 299 (463)
T ss_pred -------------------cccCCCC-EEEEEEeeeccCCHHHHHHHHHHHHHhcc-----------------------c
Confidence 0012223 78999999999999999999998765200 0
Q ss_pred cCCCEEEEEEeCCCCh------HHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHH
Q 011969 314 LYPRLLFIITGKGPDK------ESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMF 386 (474)
Q Consensus 314 ~~~~~~l~ivG~g~~~------~~~~~~~~~l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eam 386 (474)
..|+++|+|+|+++.. +++++.++++++ ++|.|+|. ++.+++..+|+.||+++. ++..|+||++++|||
T Consensus 300 ~~~~~~LvIvG~~~~~~~~~~~~eL~~la~~l~L~~~V~f~g~-v~~~el~~ll~~a~~~v~---~s~~E~FGivvlEAM 375 (463)
T PLN02949 300 DVPRPKLQFVGSCRNKEDEERLQKLKDRAKELGLDGDVEFHKN-VSYRDLVRLLGGAVAGLH---SMIDEHFGISVVEYM 375 (463)
T ss_pred cCCCcEEEEEeCCCCcccHHHHHHHHHHHHHcCCCCcEEEeCC-CCHHHHHHHHHhCcEEEe---CCccCCCChHHHHHH
Confidence 1468999999987431 568888999999 69999998 999999999999999998 788999999999999
Q ss_pred hcCCcEEEecccccc-ccccc---CCcEEEeCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHHH
Q 011969 387 GCGLPVCAVSYSCIE-ELVKV---DKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAK 462 (474)
Q Consensus 387 a~G~PVia~~~~~~~-e~v~~---~~~G~l~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~ 462 (474)
|||+|||+++.+|.. |++.+ +.+|++++|+++++++|.+++++ +++.+++|++++++.+.+++|+...++..+
T Consensus 376 A~G~PVIa~~~gGp~~eIV~~~~~g~tG~l~~~~~~la~ai~~ll~~---~~~~r~~m~~~ar~~~~~FS~e~~~~~~~~ 452 (463)
T PLN02949 376 AAGAVPIAHNSAGPKMDIVLDEDGQQTGFLATTVEEYADAILEVLRM---RETERLEIAAAARKRANRFSEQRFNEDFKD 452 (463)
T ss_pred HcCCcEEEeCCCCCcceeeecCCCCcccccCCCHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHcCHHHHHHHHHH
Confidence 999999999988764 77765 67899999999999999999985 577889999999988888999887766544
Q ss_pred HH
Q 011969 463 PL 464 (474)
Q Consensus 463 ~~ 464 (474)
.+
T Consensus 453 ~i 454 (463)
T PLN02949 453 AI 454 (463)
T ss_pred HH
Confidence 33
|
|
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
Probab=99.98 E-value=9.2e-29 Score=278.66 Aligned_cols=276 Identities=16% Similarity=0.163 Sum_probs=204.6
Q ss_pred CCCCEEEEeCCCChhHHHHHHHHHh------hCCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhhhcCEEEEe
Q 011969 100 ASPDVFLVQNPPSVPTLVAVKWASS------LRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCV 173 (474)
Q Consensus 100 ~~~Dvi~~~~~~~~~~~~~~~~~~~------~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~v 173 (474)
.+|||||+|.. .+.+++.+++. +.++|+|+++|+..+ . .+ ..+.....||.|++|
T Consensus 708 ~~PDIIHaHDW---~talva~llk~~~~~~~~~~~p~V~TiHnl~~-------~-~n--------~lk~~l~~AD~ViTV 768 (1036)
T PLN02316 708 FHPDIIHCHDW---SSAPVAWLFKDHYAHYGLSKARVVFTIHNLEF-------G-AN--------HIGKAMAYADKATTV 768 (1036)
T ss_pred CCCCEEEECCC---hHHHHHHHHHHhhhhhccCCCCEEEEeCCccc-------c-hh--------HHHHHHHHCCEEEeC
Confidence 68999999994 44444555444 346899999999743 1 11 122355789999999
Q ss_pred CHHHHHHHHHHhC-----CceEEEeCCC-CCCCCCCCh-----------------HHHHHHHHhhhhccCCCCCcccccc
Q 011969 174 TQAMQHELAQNWG-----IKATVLYDQP-PEFFHPTSL-----------------EEKHELFCRLNKILHQPLGVQDCVS 230 (474)
Q Consensus 174 S~~~~~~l~~~~~-----~~~~vi~n~~-~~~f~~~~~-----------------~~~~~~~~~l~~~~~~~~~~~~~~~ 230 (474)
|+..++++..... .++.+|+||. .+.|.|... ..+..+++++|
T Consensus 769 S~tya~EI~~~~~l~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~gK~~~k~~Lr~~lG-------------- 834 (1036)
T PLN02316 769 SPTYSREVSGNSAIAPHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVEGKRAAKEALQQRLG-------------- 834 (1036)
T ss_pred CHHHHHHHHhccCcccccCCEEEEECCccccccCCcccccccccCCchhhhhhhhhhHHHHHHHhC--------------
Confidence 9999998876532 3489999994 456655421 11334555565
Q ss_pred ccccCCcCcchhhhhcccccccccC-CCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcC
Q 011969 231 NAGMEGQKADETIFTSLAGIDVFLK-PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISD 309 (474)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (474)
++ ++.| +++++||+.+.||++.|++|+..+.+
T Consensus 835 -----------------------L~~~d~p-lVg~VGRL~~qKGvdlLi~Al~~ll~----------------------- 867 (1036)
T PLN02316 835 -----------------------LKQADLP-LVGIITRLTHQKGIHLIKHAIWRTLE----------------------- 867 (1036)
T ss_pred -----------------------CCcccCe-EEEEEeccccccCHHHHHHHHHHHhh-----------------------
Confidence 22 2344 89999999999999999999998755
Q ss_pred CccccCCCEEEEEEeCCCC---hHHHHHHHHHcCC---CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHH
Q 011969 310 GKQYLYPRLLFIITGKGPD---KESYEEKIRRLRL---KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVV 383 (474)
Q Consensus 310 ~~~~~~~~~~l~ivG~g~~---~~~~~~~~~~l~l---~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~ 383 (474)
++++|+|+|+||+ .+.++++++++++ ++|.|.+. .+......+|+.||++|+ ||..|+||++.+
T Consensus 868 ------~~~qlVIvG~Gpd~~~e~~l~~La~~Lg~~~~~rV~f~g~-~de~lah~iyaaADiflm---PS~~EP~GLvqL 937 (1036)
T PLN02316 868 ------RNGQVVLLGSAPDPRIQNDFVNLANQLHSSHHDRARLCLT-YDEPLSHLIYAGADFILV---PSIFEPCGLTQL 937 (1036)
T ss_pred ------cCcEEEEEeCCCCHHHHHHHHHHHHHhCccCCCeEEEEec-CCHHHHHHHHHhCcEEEe---CCcccCccHHHH
Confidence 4689999999986 3578888888865 58999987 444444589999999999 799999999999
Q ss_pred HHHhcCCcEEEecccccccccccC-------------CcEEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc
Q 011969 384 DMFGCGLPVCAVSYSCIEELVKVD-------------KNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG 448 (474)
Q Consensus 384 Eama~G~PVia~~~~~~~e~v~~~-------------~~G~l~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~ 448 (474)
|||+||+|+|+++.||+.|+|.++ .+|++++ |+++|+.+|.+++..+...+..+.++++++. .
T Consensus 938 EAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~~~d~~aLa~AL~raL~~~~~~~~~~~~~~r~~m--~ 1015 (1036)
T PLN02316 938 TAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFDGADAAGVDYALNRAISAWYDGRDWFNSLCKRVM--E 1015 (1036)
T ss_pred HHHHcCCCeEEEcCCCcHhhccccccccccccccccCCceEEeCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHH--H
Confidence 999999999999999999999874 6999997 6999999999999864323333333333333 2
Q ss_pred cccchHHHHHHHHHHHHHHH
Q 011969 449 LSARWATEWEEHAKPLITEV 468 (474)
Q Consensus 449 ~~~~w~~~~~~~~~~~~~~~ 468 (474)
+.++|+...+++. .+++++
T Consensus 1016 ~dFSW~~~A~~Y~-~LY~~a 1034 (1036)
T PLN02316 1016 QDWSWNRPALDYM-ELYHSA 1034 (1036)
T ss_pred hhCCHHHHHHHHH-HHHHHH
Confidence 4788988776653 444443
|
|
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-29 Score=254.02 Aligned_cols=273 Identities=21% Similarity=0.244 Sum_probs=210.5
Q ss_pred CCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhhhcCEEEEeCHHHHH
Q 011969 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179 (474)
Q Consensus 100 ~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~ 179 (474)
.++|+||++++..... +..+.|+++++|+..+..... .........++.+++.+.+.+|.++++|+.+++
T Consensus 84 ~~~Dii~~~~~~~~~~--------~~~~~~~i~~~hd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~ 153 (365)
T cd03809 84 LGLDLLHSPHNTAPLL--------RLRGVPVVVTIHDLIPLRFPE--YFSPGFRRYFRRLLRRALRRADAIITVSEATKR 153 (365)
T ss_pred cCCCeeeecccccCcc--------cCCCCCEEEEeccchhhhCcc--cCCHHHHHHHHHHHHHHHHHcCEEEEccHHHHH
Confidence 7899999998543322 567899999999985322211 111122456678888899999999999999999
Q ss_pred HHHHHhCC---ceEEEeCCCC-CCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhcccccccccC
Q 011969 180 ELAQNWGI---KATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLK 255 (474)
Q Consensus 180 ~l~~~~~~---~~~vi~n~~~-~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (474)
.+.+.++. ++.+++|+.+ ..+.+..... ..... .
T Consensus 154 ~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~----~~~~~-------------------------------------~- 191 (365)
T cd03809 154 DLLRYLGVPPDKIVVIPLGVDPRFRPPPAEAE----VLRAL-------------------------------------Y- 191 (365)
T ss_pred HHHHHhCcCHHHEEeeccccCccccCCCchHH----HHHHh-------------------------------------c-
Confidence 99988763 3889999855 3443332111 11111 1
Q ss_pred CCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCCh-HHHHH
Q 011969 256 PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK-ESYEE 334 (474)
Q Consensus 256 ~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~-~~~~~ 334 (474)
...+..++|+|++.+.||++.+++++..+.+. .++++|+++|.++.. ....+
T Consensus 192 ~~~~~~i~~~G~~~~~K~~~~~l~~~~~~~~~---------------------------~~~~~l~i~G~~~~~~~~~~~ 244 (365)
T cd03809 192 LLPRPYFLYVGTIEPRKNLERLLEAFARLPAK---------------------------GPDPKLVIVGKRGWLNEELLA 244 (365)
T ss_pred CCCCCeEEEeCCCccccCHHHHHHHHHHHHHh---------------------------cCCCCEEEecCCccccHHHHH
Confidence 22334899999999999999999999999873 557999999987543 33334
Q ss_pred HHHHcCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecccccccccccCCcEEEe
Q 011969 335 KIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF 413 (474)
Q Consensus 335 ~~~~l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~~~~e~v~~~~~G~l~ 413 (474)
.+++++. ++|.+.|. ++.+++..+|+.||++++ |+..|++|++++|||++|+|||+++.+++.|++. .+|+++
T Consensus 245 ~~~~~~~~~~v~~~g~-~~~~~~~~~~~~~d~~l~---ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~--~~~~~~ 318 (365)
T cd03809 245 RLRELGLGDRVRFLGY-VSDEELAALYRGARAFVF---PSLYEGFGLPVLEAMACGTPVIASNISSLPEVAG--DAALYF 318 (365)
T ss_pred HHHHcCCCCeEEECCC-CChhHHHHHHhhhhhhcc---cchhccCCCCHHHHhcCCCcEEecCCCCccceec--Cceeee
Confidence 4456777 79999998 999999999999999999 6777999999999999999999999999999884 456666
Q ss_pred C--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHH
Q 011969 414 S--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHA 461 (474)
Q Consensus 414 ~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ 461 (474)
. |.++++++|.++++ |++.++++++++.+...+++|+...++++
T Consensus 319 ~~~~~~~~~~~i~~l~~----~~~~~~~~~~~~~~~~~~~sw~~~~~~~~ 364 (365)
T cd03809 319 DPLDPEALAAAIERLLE----DPALREELRERGLARAKRFSWEKTARRTL 364 (365)
T ss_pred CCCCHHHHHHHHHHHhc----CHHHHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence 4 79999999999988 48999999999988777898887766543
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. |
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-29 Score=252.11 Aligned_cols=310 Identities=14% Similarity=0.091 Sum_probs=214.0
Q ss_pred CCCCCchH-HHHHHHHHhhCCCeEEEEecCCCCCCcceeccCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHHHHH
Q 011969 14 DLGRSPRM-QYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLL 92 (474)
Q Consensus 14 ~~g~~~r~-~~~a~~l~~~~g~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (474)
..||..+. ...+..|.++ ||+|++++......... ............ ........... ...+
T Consensus 17 ~~GG~~~~~~~l~~~L~~~-g~~V~v~~~~~~~~~~~--------~~~~~~~~~~~~-~~~~~~~~~~~-------~~~~ 79 (335)
T cd03802 17 AYGGTERVVAALTEGLVAR-GHEVTLFASGDSKTAAP--------LVPVVPEPLRLD-APGRDRAEAEA-------LALA 79 (335)
T ss_pred ccCcHHHHHHHHHHHHHhc-CceEEEEecCCCCcccc--------eeeccCCCcccc-cchhhHhhHHH-------HHHH
Confidence 56777774 4556777776 99999999776532211 111110000000 00000000000 1111
Q ss_pred HHHhhhcCCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhhhcCEEEE
Q 011969 93 WFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLC 172 (474)
Q Consensus 93 ~~~~~~~~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~ 172 (474)
...+ +..+||+||+|.+..... +++..+.|+|++.|+... ..... .......++.+++
T Consensus 80 ~~~~-~~~~~Divh~~~~~~~~~------~~~~~~~~~v~~~h~~~~-------~~~~~--------~~~~~~~~~~~~~ 137 (335)
T cd03802 80 ERAL-AAGDFDIVHNHSLHLPLP------FARPLPVPVVTTLHGPPD-------PELLK--------LYYAARPDVPFVS 137 (335)
T ss_pred HHHH-hcCCCCEEEecCcccchh------hhcccCCCEEEEecCCCC-------cccch--------HHHhhCcCCeEEE
Confidence 1222 337899999998533221 456778999999998842 11111 1123356789999
Q ss_pred eCHHHHHHHHHHhCCceEEEeCCCC-CCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhcccccc
Q 011969 173 VTQAMQHELAQNWGIKATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGID 251 (474)
Q Consensus 173 vS~~~~~~l~~~~~~~~~vi~n~~~-~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (474)
+|+..++.+... .++.+++|+.+ +.|++.+
T Consensus 138 ~s~~~~~~~~~~--~~~~vi~ngvd~~~~~~~~----------------------------------------------- 168 (335)
T cd03802 138 ISDAQRRPWPPL--PWVATVHNGIDLDDYPFRG----------------------------------------------- 168 (335)
T ss_pred ecHHHHhhcccc--cccEEecCCcChhhCCCCC-----------------------------------------------
Confidence 999998776553 56889999854 4454321
Q ss_pred cccCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCChHH
Q 011969 252 VFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKES 331 (474)
Q Consensus 252 ~~~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~ 331 (474)
.+++ .++|+|++.+.||++.++++++. .+++|+|+|.|+..+.
T Consensus 169 ----~~~~-~i~~~Gr~~~~Kg~~~li~~~~~--------------------------------~~~~l~i~G~~~~~~~ 211 (335)
T cd03802 169 ----PKGD-YLLFLGRISPEKGPHLAIRAARR--------------------------------AGIPLKLAGPVSDPDY 211 (335)
T ss_pred ----CCCC-EEEEEEeeccccCHHHHHHHHHh--------------------------------cCCeEEEEeCCCCHHH
Confidence 1122 78999999999999999998753 4689999999988777
Q ss_pred HHHHHHHcC-C-CcEEEecCCCCcccHHHHHhcccEEEeeccCC-CCCCCchHHHHHHhcCCcEEEecccccccccccCC
Q 011969 332 YEEKIRRLR-L-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSS-SGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDK 408 (474)
Q Consensus 332 ~~~~~~~l~-l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s-~~e~~p~kv~Eama~G~PVia~~~~~~~e~v~~~~ 408 (474)
.....++.. + ++|.|.|. ++.+++..+|+.||++++ ++ ..|++|++++||||||+|||+++.++..|++.++.
T Consensus 212 ~~~~~~~~~~~~~~v~~~G~-~~~~~~~~~~~~~d~~v~---ps~~~E~~~~~~lEAma~G~PvI~~~~~~~~e~i~~~~ 287 (335)
T cd03802 212 FYREIAPELLDGPDIEYLGE-VGGAEKAELLGNARALLF---PILWEEPFGLVMIEAMACGTPVIAFRRGAVPEVVEDGV 287 (335)
T ss_pred HHHHHHHhcccCCcEEEeCC-CCHHHHHHHHHhCcEEEe---CCcccCCcchHHHHHHhcCCCEEEeCCCCchhheeCCC
Confidence 777766664 3 79999998 999999999999999999 45 46999999999999999999999999999999999
Q ss_pred cEEEeCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHH
Q 011969 409 NGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHA 461 (474)
Q Consensus 409 ~G~l~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ 461 (474)
+|++++++++++++|..+.+. + .+..++.+.+ +++|+..-+++.
T Consensus 288 ~g~l~~~~~~l~~~l~~l~~~----~--~~~~~~~~~~---~~s~~~~~~~~~ 331 (335)
T cd03802 288 TGFLVDSVEELAAAVARADRL----D--RAACRRRAER---RFSAARMVDDYL 331 (335)
T ss_pred cEEEeCCHHHHHHHHHHHhcc----H--HHHHHHHHHH---hCCHHHHHHHHH
Confidence 999999999999999998763 2 2344444444 777776555443
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. |
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-29 Score=270.53 Aligned_cols=274 Identities=17% Similarity=0.207 Sum_probs=214.4
Q ss_pred cCCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhcc--C------CCchHHHHHHHHHHHHhhhcCEE
Q 011969 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSL--G------RRSHFVSIYRWIEKYYGKMANGC 170 (474)
Q Consensus 99 ~~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~--~------~~~~~~~~~~~~e~~~~~~ad~v 170 (474)
..++|++|+|+++. ..+++.++++..++|+|++.|+.......... . .++.+.+++..+++.+++.||.+
T Consensus 171 ~~~~dviH~~s~~~--~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ad~I 248 (475)
T cd03813 171 LPKADVYHAVSTGY--AGLLGALAKARRGTPFLLTEHGIYTRERKIELLQADWEMSYFRRLWIRFFESLGRLAYQAADRI 248 (475)
T ss_pred CCCCCEEeccCcch--HHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHhCCEE
Confidence 46899999998532 33346677778899999999997321100000 0 01222355678889999999999
Q ss_pred EEeCHHHHHHHHHHhCC---ceEEEeCCCC-CCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhc
Q 011969 171 LCVTQAMQHELAQNWGI---KATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTS 246 (474)
Q Consensus 171 i~vS~~~~~~l~~~~~~---~~~vi~n~~~-~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (474)
+++|+..++.+.+ .|. ++.++||+.+ +.|.+....
T Consensus 249 i~~s~~~~~~~~~-~g~~~~ki~vIpNgid~~~f~~~~~~---------------------------------------- 287 (475)
T cd03813 249 TTLYEGNRERQIE-DGADPEKIRVIPNGIDPERFAPARRA---------------------------------------- 287 (475)
T ss_pred EecCHHHHHHHHH-cCCCHHHeEEeCCCcCHHHcCCcccc----------------------------------------
Confidence 9999999877655 454 3889999954 445443210
Q ss_pred ccccccccCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCC
Q 011969 247 LAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKG 326 (474)
Q Consensus 247 ~~~~~~~~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g 326 (474)
...+.+.+++|+|++.+.||++.+++|++.+.++ .|+++|+|+|+|
T Consensus 288 -------~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~---------------------------~p~~~l~IvG~g 333 (475)
T cd03813 288 -------RPEKEPPVVGLIGRVVPIKDIKTFIRAAAIVRKK---------------------------IPDAEGWVIGPT 333 (475)
T ss_pred -------ccCCCCcEEEEEeccccccCHHHHHHHHHHHHHh---------------------------CCCeEEEEECCC
Confidence 0122334899999999999999999999998773 689999999998
Q ss_pred CC----hHHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecccccc
Q 011969 327 PD----KESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIE 401 (474)
Q Consensus 327 ~~----~~~~~~~~~~l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~~~~ 401 (474)
++ .+++++.++++++ ++|.|+| .+++..+|+.||++|+ +|..|++|++++||||||+|||+|+.++..
T Consensus 334 ~~~~~~~~e~~~li~~l~l~~~V~f~G----~~~v~~~l~~aDv~vl---pS~~Eg~p~~vlEAma~G~PVVatd~g~~~ 406 (475)
T cd03813 334 DEDPEYAEECRELVESLGLEDNVKFTG----FQNVKEYLPKLDVLVL---TSISEGQPLVILEAMAAGIPVVATDVGSCR 406 (475)
T ss_pred CcChHHHHHHHHHHHHhCCCCeEEEcC----CccHHHHHHhCCEEEe---CchhhcCChHHHHHHHcCCCEEECCCCChH
Confidence 53 3556778889998 7999998 4889999999999999 688899999999999999999999999999
Q ss_pred ccccc------CCcEEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc-cccchHHHHHHH
Q 011969 402 ELVKV------DKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARWATEWEEH 460 (474)
Q Consensus 402 e~v~~------~~~G~l~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~~~~ 460 (474)
|++.+ +.+|++++ |+++++++|.+++++ ++.+++|++++++.+ ..++|+...++.
T Consensus 407 elv~~~~~~~~g~~G~lv~~~d~~~la~ai~~ll~~----~~~~~~~~~~a~~~v~~~~s~~~~~~~y 470 (475)
T cd03813 407 ELIEGADDEALGPAGEVVPPADPEALARAILRLLKD----PELRRAMGEAGRKRVERYYTLERMIDSY 470 (475)
T ss_pred HHhcCCcccccCCceEEECCCCHHHHHHHHHHHhcC----HHHHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 99988 56999986 799999999999984 889999999998865 346776655543
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.9e-29 Score=247.88 Aligned_cols=272 Identities=24% Similarity=0.331 Sum_probs=211.1
Q ss_pred cCCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhhhcCEEEEeCHHHH
Q 011969 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178 (474)
Q Consensus 99 ~~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~ 178 (474)
..+||+||++.+ .+...+.....+..++|++++.|+...... ... ...+..++...+.+|.++++|+.++
T Consensus 91 ~~~~dii~~~~~--~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~-------~~~-~~~~~~~~~~~~~~d~ii~~s~~~~ 160 (377)
T cd03798 91 RFRPDLIHAHFA--YPDGFAAALLKRKLGIPLVVTLHGSDVNLL-------PRK-RLLRALLRRALRRADAVIAVSEALA 160 (377)
T ss_pred cCCCCEEEEecc--chHHHHHHHHHHhcCCCEEEEeecchhccc-------Cch-hhHHHHHHHHHhcCCeEEeCCHHHH
Confidence 479999999964 334444566666778899999999843111 111 1345677788899999999999999
Q ss_pred HHHHHH--hCCceEEEeCCCC-CCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhcccccccccC
Q 011969 179 HELAQN--WGIKATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLK 255 (474)
Q Consensus 179 ~~l~~~--~~~~~~vi~n~~~-~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (474)
+.+.+. .+.++.+++++.+ ..+.+...... .+++ .
T Consensus 161 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~----~~~~--------------------------------------~ 198 (377)
T cd03798 161 DELKALGIDPEKVTVIPNGVDTERFSPADRAEA----RKLG--------------------------------------L 198 (377)
T ss_pred HHHHHhcCCCCceEEcCCCcCcccCCCcchHHH----Hhcc--------------------------------------C
Confidence 999886 3456899999854 44444322111 1111 1
Q ss_pred CCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCChHHHHHH
Q 011969 256 PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEK 335 (474)
Q Consensus 256 ~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~ 335 (474)
.+.+..++++|++.+.||++.+++++..+.++ .++++|+|+|.++..+.+++.
T Consensus 199 ~~~~~~i~~~g~~~~~k~~~~li~~~~~~~~~---------------------------~~~~~l~i~g~~~~~~~~~~~ 251 (377)
T cd03798 199 PEDKKVILFVGRLVPRKGIDYLIEALARLLKK---------------------------RPDVHLVIVGDGPLREALEAL 251 (377)
T ss_pred CCCceEEEEeccCccccCHHHHHHHHHHHHhc---------------------------CCCeEEEEEcCCcchHHHHHH
Confidence 23345899999999999999999999998762 678999999999988889999
Q ss_pred HHHcCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecccccccccccCCcEEEeC
Q 011969 336 IRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFS 414 (474)
Q Consensus 336 ~~~l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~~~~e~v~~~~~G~l~~ 414 (474)
++++++ ++|.+.|. ++.+++..+++.||++++ ++..+++|.+++|||+||+|||+++.++..+++.++.+|++++
T Consensus 252 ~~~~~~~~~v~~~g~-~~~~~~~~~~~~ad~~i~---~~~~~~~~~~~~Ea~~~G~pvI~~~~~~~~~~~~~~~~g~~~~ 327 (377)
T cd03798 252 AAELGLEDRVTFLGA-VPHEEVPAYYAAADVFVL---PSLREGFGLVLLEAMACGLPVVATDVGGIPEIITDGENGLLVP 327 (377)
T ss_pred HHhcCCcceEEEeCC-CCHHHHHHHHHhcCeeec---chhhccCChHHHHHHhcCCCEEEecCCChHHHhcCCcceeEEC
Confidence 998888 69999998 999999999999999999 5666899999999999999999999999999999999999986
Q ss_pred --CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH-hccccchHHHHHH
Q 011969 415 --SSSELADQLLMLFKGFPDDSDVLKKLRNGTLE-MGLSARWATEWEE 459 (474)
Q Consensus 415 --~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~w~~~~~~ 459 (474)
|+++++++|.+++++ ++. ++..++.+ ....++|+...++
T Consensus 328 ~~~~~~l~~~i~~~~~~----~~~--~~~~~~~~~~~~~~s~~~~~~~ 369 (377)
T cd03798 328 PGDPEALAEAILRLLAD----PWL--RLGRAARRRVAERFSWENVAER 369 (377)
T ss_pred CCCHHHHHHHHHHHhcC----cHH--HHhHHHHHHHHHHhhHHHHHHH
Confidence 799999999999986 443 34444433 3356777654444
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. |
| >PRK14098 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-28 Score=264.44 Aligned_cols=293 Identities=14% Similarity=0.152 Sum_probs=214.1
Q ss_pred CCCCEEEEeCCCChhHHHHHHHHHhh-------CCCcEEEEecCchhhhhh----h-ccCCCchHHHHH-----HHHHHH
Q 011969 100 ASPDVFLVQNPPSVPTLVAVKWASSL-------RRSAFIVDWHNFGYTLLS----L-SLGRRSHFVSIY-----RWIEKY 162 (474)
Q Consensus 100 ~~~Dvi~~~~~~~~~~~~~~~~~~~~-------~~~~~i~~~h~~~~~~~~----~-~~~~~~~~~~~~-----~~~e~~ 162 (474)
.+||+||+|+ +.+.++..+++.. .++|+|+++|+..+.... . ..-+...+.... ..+.+.
T Consensus 140 ~~pDiiH~hd---w~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~n~lk~ 216 (489)
T PRK14098 140 WKPDIIHCHD---WYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLLPEEVCSGLHREGDEVNMLYT 216 (489)
T ss_pred CCCCEEEecC---cHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHhCCHHhhhhhhhcCCcccHHHH
Confidence 5899999998 4444445555432 379999999997531100 0 000000000000 124456
Q ss_pred HhhhcCEEEEeCHHHHHHHHHH----hC---------CceEEEeCCC-CCCCCCCChH----------------HHHHHH
Q 011969 163 YGKMANGCLCVTQAMQHELAQN----WG---------IKATVLYDQP-PEFFHPTSLE----------------EKHELF 212 (474)
Q Consensus 163 ~~~~ad~vi~vS~~~~~~l~~~----~~---------~~~~vi~n~~-~~~f~~~~~~----------------~~~~~~ 212 (474)
.++.||.|+++|+..++++.+. +| .++.+|+||. .+.|.|.... .+..++
T Consensus 217 ~i~~ad~VitVS~~~a~ei~~~~~~~~gl~~~l~~~~~kl~~I~NGID~~~~~p~~d~~~~~~~~~~~~~~k~~~k~~l~ 296 (489)
T PRK14098 217 GVEHADLLTTTSPRYAEEIAGDGEEAFGLDKVLEERKMRLHGILNGIDTRQWNPSTDKLIKKRYSIERLDGKLENKKALL 296 (489)
T ss_pred HHHhcCcceeeCHHHHHHhCcCCCCCcChHHHHHhcCCCeeEEeCCccccccCCcccccccccCCcchhhhHHHHHHHHH
Confidence 6789999999999999988652 12 3589999994 4677765321 123344
Q ss_pred HhhhhccCCCCCccccccccccCCcCcchhhhhcccccccccCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhh
Q 011969 213 CRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAIL 292 (474)
Q Consensus 213 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~ 292 (474)
+++|+ ...++.| +++++||+.+.||++.|++|+..+.+
T Consensus 297 ~~lgl-----------------------------------~~~~~~~-~i~~vgRl~~~KG~d~li~a~~~l~~------ 334 (489)
T PRK14098 297 EEVGL-----------------------------------PFDEETP-LVGVIINFDDFQGAELLAESLEKLVE------ 334 (489)
T ss_pred HHhCC-----------------------------------CCccCCC-EEEEeccccccCcHHHHHHHHHHHHh------
Confidence 44441 0113344 89999999999999999999998865
Q ss_pred ccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCC--hHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcccEEEeec
Q 011969 293 NEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD--KESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLH 370 (474)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~--~~~~~~~~~~l~l~~V~f~g~~v~~~~~~~~l~~adv~v~~~ 370 (474)
++++|+|+|+|+. .+.+++.+++++ ++|.|.|. ++.+++..+|+.||++++
T Consensus 335 -----------------------~~~~lvivG~G~~~~~~~l~~l~~~~~-~~V~~~g~-~~~~~~~~~~a~aDi~l~-- 387 (489)
T PRK14098 335 -----------------------LDIQLVICGSGDKEYEKRFQDFAEEHP-EQVSVQTE-FTDAFFHLAIAGLDMLLM-- 387 (489)
T ss_pred -----------------------cCcEEEEEeCCCHHHHHHHHHHHHHCC-CCEEEEEe-cCHHHHHHHHHhCCEEEe--
Confidence 4799999999975 467888888775 68999998 899999999999999999
Q ss_pred cCCCCCCCchHHHHHHhcCCcEEEeccccccccccc----CCcEEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 011969 371 TSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKV----DKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGT 444 (474)
Q Consensus 371 ~~s~~e~~p~kv~Eama~G~PVia~~~~~~~e~v~~----~~~G~l~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~ 444 (474)
||..|+||++.+|||+||+|+|+++.||..|.+.+ +.+|++++ |+++|+++|.++++.+. +++.++++++++
T Consensus 388 -PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~-~~~~~~~~~~~~ 465 (489)
T PRK14098 388 -PGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSEDKGSGFIFHDYTPEALVAKLGEALALYH-DEERWEELVLEA 465 (489)
T ss_pred -CCCCCCchHHHHHHHhCCCCeEEecCCCCceeeecCCCCCCceeEeCCCCHHHHHHHHHHHHHHHc-CHHHHHHHHHHH
Confidence 78899999999999999999999999999988864 67999996 79999999998765332 577788888777
Q ss_pred HHhccccchHHHHHHHHHHHHHHHh
Q 011969 445 LEMGLSARWATEWEEHAKPLITEVI 469 (474)
Q Consensus 445 ~~~~~~~~w~~~~~~~~~~~~~~~~ 469 (474)
.+ +.++|+...+++ ..+++++.
T Consensus 466 ~~--~~fsw~~~a~~y-~~lY~~~~ 487 (489)
T PRK14098 466 ME--RDFSWKNSAEEY-AQLYRELL 487 (489)
T ss_pred hc--CCCChHHHHHHH-HHHHHHHh
Confidence 43 578998887775 44555543
|
|
| >PLN00142 sucrose synthase | Back alignment and domain information |
|---|
Probab=99.97 E-value=6e-29 Score=274.67 Aligned_cols=306 Identities=14% Similarity=0.116 Sum_probs=210.2
Q ss_pred CCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCC---chHHHHH--HHHHHHHhhhcCEEEEeC
Q 011969 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRR---SHFVSIY--RWIEKYYGKMANGCLCVT 174 (474)
Q Consensus 100 ~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~---~~~~~~~--~~~e~~~~~~ad~vi~vS 174 (474)
.+||+||.|. ..+.+++..+++..++|++.+.|..+-.....+-... ..-..+. ...|..+...||.||+.|
T Consensus 407 ~~PDlIHaHY---wdsg~vA~~La~~lgVP~v~T~HsL~k~K~~~~~~~~~~~e~~y~~~~r~~aE~~a~~~Ad~IIasT 483 (815)
T PLN00142 407 GKPDLIIGNY---SDGNLVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKFDDKYHFSCQFTADLIAMNHADFIITST 483 (815)
T ss_pred CCCCEEEECC---ccHHHHHHHHHHHhCCCEEEEcccchhhhccccCCcccccchhhhhhhchHHHHHHHHhhhHHHhCc
Confidence 4799999997 5666678888999999999999987532221110000 0011111 245788888999999999
Q ss_pred HHHHHHHH-------HH------------hCC-----ceEEEeCCC-CCCCCCCChHHHHHHHHhhhhccCCCCCccccc
Q 011969 175 QAMQHELA-------QN------------WGI-----KATVLYDQP-PEFFHPTSLEEKHELFCRLNKILHQPLGVQDCV 229 (474)
Q Consensus 175 ~~~~~~l~-------~~------------~~~-----~~~vi~n~~-~~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 229 (474)
......+. .. .|+ ++.++++|. ...|.|.....+ .+ ..+.
T Consensus 484 ~qEi~g~~~~i~qy~sh~~f~~p~L~rvv~GId~~~~ki~VVppGvD~~~F~P~~~~~~-rl-~~l~------------- 548 (815)
T PLN00142 484 YQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEKQK-RL-TSLH------------- 548 (815)
T ss_pred HHHHhcccchhhhhhcccccccchhhhhhccccccccCeeEECCCCChhhcCCCChHHh-hH-Hhhc-------------
Confidence 87764221 10 012 467888884 455666542211 10 0000
Q ss_pred cccccCCcCcchhhhhcccc-ccccc--CCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhh
Q 011969 230 SNAGMEGQKADETIFTSLAG-IDVFL--KPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKE 306 (474)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~ 306 (474)
+..++..|..... ..... .++.| +|+++||+.+.||++.|++|+..+.+.
T Consensus 549 -------n~I~~~l~~~~~~~e~lg~l~~~~kp-vIl~VGRL~~~KGid~LIeA~a~l~~l------------------- 601 (815)
T PLN00142 549 -------PSIEELLYSPEQNDEHIGYLKDRKKP-IIFSMARLDRVKNLTGLVEWYGKNKRL------------------- 601 (815)
T ss_pred -------ccchhhcCChHHHHHHhCCccCCCCc-EEEEEecCcccCCHHHHHHHHHHHHHh-------------------
Confidence 0000001100000 00011 23455 899999999999999999999987652
Q ss_pred hcCCccccCCCEEEEEEeCCCC------h------HHHHHHHHHcCC-CcEEEecCC---CCcccHHHHHh-cccEEEee
Q 011969 307 ISDGKQYLYPRLLFIITGKGPD------K------ESYEEKIRRLRL-KRVAFRTMW---LSAEDYPLLLG-SADLGVCL 369 (474)
Q Consensus 307 ~~~~~~~~~~~~~l~ivG~g~~------~------~~~~~~~~~l~l-~~V~f~g~~---v~~~~~~~~l~-~adv~v~~ 369 (474)
.++++|+|+|+|.+ . +.+.+.++++++ ++|.|+|.. ++.+++..++. .+|++|+
T Consensus 602 --------~~~~~LVIVGgg~d~~~s~d~ee~~el~~L~~La~~lgL~~~V~flG~~~~~~~~~eLyr~iadaaDVfVl- 672 (815)
T PLN00142 602 --------RELVNLVVVGGFIDPSKSKDREEIAEIKKMHSLIEKYNLKGQFRWIAAQTNRVRNGELYRYIADTKGAFVQ- 672 (815)
T ss_pred --------CCCcEEEEEECCccccccccHHHHHHHHHHHHHHHHcCCCCcEEEcCCcCCcccHHHHHHHHHhhCCEEEe-
Confidence 56899999998721 1 236677889998 799999851 23356666666 4799999
Q ss_pred ccCCCCCCCchHHHHHHhcCCcEEEecccccccccccCCcEEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHh
Q 011969 370 HTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEM 447 (474)
Q Consensus 370 ~~~s~~e~~p~kv~Eama~G~PVia~~~~~~~e~v~~~~~G~l~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~ 447 (474)
||..|+||++++||||||+|||+|+.||+.|+|.++.+|++++ |+++++++|..+++..-.|++.+++|++++++.
T Consensus 673 --PS~~EgFGLvvLEAMA~GlPVVATdvGG~~EIV~dG~tG~LV~P~D~eaLA~aI~~lLekLl~Dp~lr~~mg~~Ar~r 750 (815)
T PLN00142 673 --PALYEAFGLTVVEAMTCGLPTFATCQGGPAEIIVDGVSGFHIDPYHGDEAANKIADFFEKCKEDPSYWNKISDAGLQR 750 (815)
T ss_pred --CCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 7889999999999999999999999999999999999999996 799999999887642223699999999999886
Q ss_pred c-cccchHHHHHHHH
Q 011969 448 G-LSARWATEWEEHA 461 (474)
Q Consensus 448 ~-~~~~w~~~~~~~~ 461 (474)
+ +.|+|+...+++.
T Consensus 751 v~e~FSWe~~A~rll 765 (815)
T PLN00142 751 IYECYTWKIYAERLL 765 (815)
T ss_pred HHHhCCHHHHHHHHH
Confidence 5 6788877665543
|
|
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-28 Score=242.90 Aligned_cols=326 Identities=23% Similarity=0.274 Sum_probs=225.9
Q ss_pred CCCCCchH-HHHHHHHHhhCCCeEEEEecCCCCCCcceeccCC--eEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHHH
Q 011969 14 DLGRSPRM-QYQALSLARQMSLEVDVVAYGGSKPHAAILEHPS--IHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFM 90 (474)
Q Consensus 14 ~~g~~~r~-~~~a~~l~~~~g~eV~Vv~~~~~~~~~~~~~~~g--i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (474)
..||..+. ...+..|.++ ||+|++++............... ....... ............+.+.+
T Consensus 10 ~~gG~~~~~~~l~~~l~~~-g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~----- 77 (353)
T cd03811 10 GGGGAERVLLNLANGLDKR-GYDVTLVVLRDEGDYLELLPSNVKLIPVRVLK------LKSLRDLLAILRLRRLL----- 77 (353)
T ss_pred cCCCcchhHHHHHHHHHhc-CceEEEEEcCCCCccccccccchhhhceeeee------cccccchhHHHHHHHHH-----
Confidence 36666664 4556777675 99999999765443211111100 0111111 00111111222222222
Q ss_pred HHHHHhhhcCCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhhhcCEE
Q 011969 91 LLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGC 170 (474)
Q Consensus 91 ~~~~~~~~~~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~v 170 (474)
+..+||+||+++. ....++..+..+. +.|++++.|+...... ..... .. .+++...+.+|.+
T Consensus 78 -------~~~~~dii~~~~~--~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~----~~~~~-~~---~~~~~~~~~~d~i 139 (353)
T cd03811 78 -------RKEKPDVVISHLT--TTPNVLALLAARL-GTKLIVWEHNSLSLEL----KRKLR-LL---LLIRKLYRRADKI 139 (353)
T ss_pred -------HhcCCCEEEEcCc--cchhHHHHHHhhc-CCceEEEEcCcchhhh----ccchh-HH---HHHHhhccccceE
Confidence 2268999999986 2233334444444 7999999999853211 11111 01 5677888999999
Q ss_pred EEeCHHHHHHHHHHhC---CceEEEeCCCC-CCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhc
Q 011969 171 LCVTQAMQHELAQNWG---IKATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTS 246 (474)
Q Consensus 171 i~vS~~~~~~l~~~~~---~~~~vi~n~~~-~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (474)
+++|+.+++.+.+.++ .++.+++|+.+ ..+.+...... .+
T Consensus 140 i~~s~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~-----~~------------------------------- 183 (353)
T cd03811 140 VAVSEGVKEDLLKLLGIPPDKIEVIYNPIDIEEIRALAEEPL-----EL------------------------------- 183 (353)
T ss_pred EEeccchhhhHHHhhcCCccccEEecCCcChhhcCcccchhh-----hc-------------------------------
Confidence 9999999999998877 34899999854 33333221100 00
Q ss_pred ccccccccCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCC
Q 011969 247 LAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKG 326 (474)
Q Consensus 247 ~~~~~~~~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g 326 (474)
...+.+..++++|++.+.||++.++++++.+.++ .++++|+|+|.|
T Consensus 184 -------~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~l~~~---------------------------~~~~~l~i~G~~ 229 (353)
T cd03811 184 -------GIPPDGPVILAVGRLSPQKGFDTLIRAFALLRKE---------------------------GPDARLVILGDG 229 (353)
T ss_pred -------CCCCCceEEEEEecchhhcChHHHHHHHHHhhhc---------------------------CCCceEEEEcCC
Confidence 1123445899999999999999999999998773 578999999999
Q ss_pred CChHHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecccccccccc
Q 011969 327 PDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVK 405 (474)
Q Consensus 327 ~~~~~~~~~~~~l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~~~~e~v~ 405 (474)
+..+.+++.++++++ ++|.+.|. .+++..+++.||++++ ++..|++|++++|||+||+|||+++.++..|++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~v~~~g~---~~~~~~~~~~~d~~i~---ps~~e~~~~~~~Ea~~~G~PvI~~~~~~~~e~i~ 303 (353)
T cd03811 230 PLREELEALAKELGLADRVHFLGF---QSNPYPYLKAADLFVL---SSRYEGFPNVLLEAMALGTPVVATDCPGPREILE 303 (353)
T ss_pred ccHHHHHHHHHhcCCCccEEEecc---cCCHHHHHHhCCEEEe---CcccCCCCcHHHHHHHhCCCEEEcCCCChHHHhc
Confidence 999989999999998 68999997 5789999999999999 6777999999999999999999999999999999
Q ss_pred cCCcEEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Q 011969 406 VDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLE 446 (474)
Q Consensus 406 ~~~~G~l~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~ 446 (474)
++.+|++++ +.+++++.+..+.+. ..+++.++++++++.+
T Consensus 304 ~~~~g~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~ 345 (353)
T cd03811 304 DGENGLLVPVGDEAALAAAALALLDL-LLDPELRERLAAAARE 345 (353)
T ss_pred CCCceEEECCCCHHHHHHHHHHHHhc-cCChHHHHHHHHHHHH
Confidence 999999996 577884444443332 2257788888886655
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. |
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-28 Score=245.42 Aligned_cols=323 Identities=20% Similarity=0.220 Sum_probs=218.8
Q ss_pred CCCCchHH-HHHHHHHhhCCCeEEEEecCCCCCCcceeccCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHHHHHH
Q 011969 15 LGRSPRMQ-YQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLW 93 (474)
Q Consensus 15 ~g~~~r~~-~~a~~l~~~~g~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (474)
.||..++. ..+..|.++ ||+|++++........... ..+........+................... ......+.
T Consensus 14 ~gG~~~~~~~l~~~L~~~-g~~v~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 89 (359)
T cd03823 14 VGGAEVVAHDLAEALAKR-GHEVAVLTAGEDPPRQDKE-VIGVVVYGRPIDEVLRSALPRDLFHLSDYDN--PAVVAEFA 89 (359)
T ss_pred ccchHHHHHHHHHHHHhc-CCceEEEeCCCCCCCcccc-cccceeeccccccccCCCchhhhhHHHhccC--HHHHHHHH
Confidence 35666644 567888876 9999999977544322221 2233332221000101111111111110000 00111111
Q ss_pred HHhhhcCCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhhhcCEEEEe
Q 011969 94 FLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCV 173 (474)
Q Consensus 94 ~~~~~~~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~v 173 (474)
.++ +..+||+||++++..+... .....+..++|+++++|+++. ..... ....+..|.++++
T Consensus 90 ~~~-~~~~~dii~~~~~~~~~~~--~~~~~~~~~~~~i~~~hd~~~------~~~~~----------~~~~~~~d~ii~~ 150 (359)
T cd03823 90 RLL-EDFRPDVVHFHHLQGLGVS--ILRAARDRGIPIVLTLHDYWL------ICPRQ----------GLFKKGGDAVIAP 150 (359)
T ss_pred HHH-HHcCCCEEEECCccchHHH--HHHHHHhcCCCEEEEEeeeee------ecchh----------hhhccCCCEEEEe
Confidence 222 2378999999986433322 333344567999999999742 11100 1111233999999
Q ss_pred CHHHHHHHHHHhC--CceEEEeCCCC-CCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhccccc
Q 011969 174 TQAMQHELAQNWG--IKATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGI 250 (474)
Q Consensus 174 S~~~~~~l~~~~~--~~~~vi~n~~~-~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (474)
|+.+++.+.+... .++.+++|+.+ ..+.+...
T Consensus 151 s~~~~~~~~~~~~~~~~~~vi~n~~~~~~~~~~~~--------------------------------------------- 185 (359)
T cd03823 151 SRFLLDRYVANGLFAEKISVIRNGIDLDRAKRPRR--------------------------------------------- 185 (359)
T ss_pred CHHHHHHHHHcCCCccceEEecCCcChhhcccccc---------------------------------------------
Confidence 9999998887644 35899999854 33322110
Q ss_pred ccccCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCChH
Q 011969 251 DVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKE 330 (474)
Q Consensus 251 ~~~~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~ 330 (474)
..++.+..++|+|++.+.||++.++++++.+.+ ++++|+++|.++...
T Consensus 186 ---~~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~~-----------------------------~~~~l~i~G~~~~~~ 233 (359)
T cd03823 186 ---APPGGRLRFGFIGQLTPHKGVDLLLEAFKRLPR-----------------------------GDIELVIVGNGLELE 233 (359)
T ss_pred ---CCCCCceEEEEEecCccccCHHHHHHHHHHHHh-----------------------------cCcEEEEEcCchhhh
Confidence 013344589999999999999999999998754 579999999988765
Q ss_pred HHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCC-CCCCchHHHHHHhcCCcEEEecccccccccccCC
Q 011969 331 SYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS-GLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDK 408 (474)
Q Consensus 331 ~~~~~~~~l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~-~e~~p~kv~Eama~G~PVia~~~~~~~e~v~~~~ 408 (474)
...... +. ++|.+.|. ++.+++..+|+.||++++ |+. .|++|++++|||+||+|||+++.++..|++.++.
T Consensus 234 ~~~~~~---~~~~~v~~~g~-~~~~~~~~~~~~ad~~i~---ps~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~ 306 (359)
T cd03823 234 EESYEL---EGDPRVEFLGA-YPQEEIDDFYAEIDVLVV---PSIWPENFPLVIREALAAGVPVIASDIGGMAELVRDGV 306 (359)
T ss_pred HHHHhh---cCCCeEEEeCC-CCHHHHHHHHHhCCEEEE---cCcccCCCChHHHHHHHCCCCEEECCCCCHHHHhcCCC
Confidence 444333 33 69999998 999999999999999999 464 7999999999999999999999999999999999
Q ss_pred cEEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc
Q 011969 409 NGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG 448 (474)
Q Consensus 409 ~G~l~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~ 448 (474)
+|++++ |+++++++|..++++ ++.++++++++++..
T Consensus 307 ~g~~~~~~d~~~l~~~i~~l~~~----~~~~~~~~~~~~~~~ 344 (359)
T cd03823 307 NGLLFPPGDAEDLAAALERLIDD----PDLLERLRAGIEPPR 344 (359)
T ss_pred cEEEECCCCHHHHHHHHHHHHhC----hHHHHHHHHhHHHhh
Confidence 999996 589999999999984 888999999998854
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). |
| >PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.6e-28 Score=259.66 Aligned_cols=281 Identities=13% Similarity=0.118 Sum_probs=207.0
Q ss_pred CCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEE-ecCchhhhhhhccCCCchHHHHHHHHHH--HHhhhcCEEEEeCHH
Q 011969 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVD-WHNFGYTLLSLSLGRRSHFVSIYRWIEK--YYGKMANGCLCVTQA 176 (474)
Q Consensus 100 ~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~h~~~~~~~~~~~~~~~~~~~~~~~~e~--~~~~~ad~vi~vS~~ 176 (474)
.+||+||+++. .+.+.+.+++++.+.|++++ .|.. +. ....+.+..-+..+.+ .+.+.+| +++.|..
T Consensus 279 ~rpDIVHt~~~---~a~l~g~laA~lagvpviv~~~h~~-~~-----~~~~r~~~~e~~~~~~a~~i~~~sd-~v~~s~~ 348 (578)
T PRK15490 279 RKLDYLSVWQD---GACLMIALAALIAGVPRIQLGLRGL-PP-----VVRKRLFKPEYEPLYQALAVVPGVD-FMSNNHC 348 (578)
T ss_pred cCCCEEEEcCc---ccHHHHHHHHHhcCCCEEEEeeccc-CC-----cchhhHHHHHHHHhhhhceeEecch-hhhccHH
Confidence 89999999993 33345778888889999775 5543 11 1111111111111111 2234455 7788998
Q ss_pred HHHHHHHHhCCc---eEEEeCCCC-CCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhccccccc
Q 011969 177 MQHELAQNWGIK---ATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDV 252 (474)
Q Consensus 177 ~~~~l~~~~~~~---~~vi~n~~~-~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (474)
+++.+.+.++.+ +.+||||.+ ..|.+.... ....+.++..
T Consensus 349 v~~~l~~~lgip~~KI~VIyNGVD~~rf~p~~~~-~~~~r~~~~~----------------------------------- 392 (578)
T PRK15490 349 VTRHYADWLKLEAKHFQVVYNGVLPPSTEPSSEV-PHKIWQQFTQ----------------------------------- 392 (578)
T ss_pred HHHHHHHHhCCCHHHEEEEeCCcchhhcCccchh-hHHHHHHhhh-----------------------------------
Confidence 888888776654 899999944 566664321 1122222220
Q ss_pred ccCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCChHHH
Q 011969 253 FLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESY 332 (474)
Q Consensus 253 ~~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~~ 332 (474)
.++++. .+++++|++.+.||+..+++++..+.++ .|+++|+|+|+|+..+++
T Consensus 393 ~l~~~~-~vIg~VgRl~~~Kg~~~LI~A~a~llk~---------------------------~pdirLvIVGdG~~~eeL 444 (578)
T PRK15490 393 KTQDAD-TTIGGVFRFVGDKNPFAWIDFAARYLQH---------------------------HPATRFVLVGDGDLRAEA 444 (578)
T ss_pred ccCCCC-cEEEEEEEEehhcCHHHHHHHHHHHHhH---------------------------CCCeEEEEEeCchhHHHH
Confidence 011223 3889999999999999999999887663 589999999999999999
Q ss_pred HHHHHHcCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecccccccccccCCcEE
Q 011969 333 EEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGL 411 (474)
Q Consensus 333 ~~~~~~l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~~~~e~v~~~~~G~ 411 (474)
++.++++++ ++|.|+|. .+|+..+|+.||++|+ ||..|+||++++||||||+|||+++.++..|+|.++.+|+
T Consensus 445 k~la~elgL~d~V~FlG~---~~Dv~~~LaaADVfVl---PS~~EGfp~vlLEAMA~GlPVVATdvGG~~EiV~dG~nG~ 518 (578)
T PRK15490 445 QKRAEQLGILERILFVGA---SRDVGYWLQKMNVFIL---FSRYEGLPNVLIEAQMVGVPVISTPAGGSAECFIEGVSGF 518 (578)
T ss_pred HHHHHHcCCCCcEEECCC---hhhHHHHHHhCCEEEE---cccccCccHHHHHHHHhCCCEEEeCCCCcHHHcccCCcEE
Confidence 999999999 79999998 6899999999999999 6888999999999999999999999999999999999999
Q ss_pred EeC--CHHHHHHHHH---HHHhCCCCCHHHHHHHHHHHHHhc-cccchHHHHHHHHHHH
Q 011969 412 LFS--SSSELADQLL---MLFKGFPDDSDVLKKLRNGTLEMG-LSARWATEWEEHAKPL 464 (474)
Q Consensus 412 l~~--~~~~la~~i~---~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~~~~~~~~ 464 (474)
+++ |++++++++. .+.+. ......|++++++.+ ..++|+...+++.+-+
T Consensus 519 LVp~~D~~aLa~ai~lA~aL~~l----l~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki~ 573 (578)
T PRK15490 519 ILDDAQTVNLDQACRYAEKLVNL----WRSRTGICQQTQSFLQERFTVEHMVGTFVKTI 573 (578)
T ss_pred EECCCChhhHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHH
Confidence 996 5777777763 33332 344556888888865 5688888777766554
|
|
| >PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-28 Score=251.13 Aligned_cols=242 Identities=16% Similarity=0.206 Sum_probs=182.8
Q ss_pred CCCCEEEEeCCCChhHHHHHHHHHhhCCCc--EEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhhhcCEEEEeCHHH
Q 011969 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSA--FIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAM 177 (474)
Q Consensus 100 ~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~--~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~ 177 (474)
.+||+||++++. ....+.++++..+.| ++.+.|... .... .. ... ..+.+|.++++|+.+
T Consensus 83 ~~~Dii~~~~~~---~~~~~~~~~~~~~~~~~~~~~~h~~~--------~~~~-~~----~~~--~~~~~d~~i~~S~~~ 144 (359)
T PRK09922 83 TQPDIVICIDVI---SCLYANKARKKSGKQFKIFSWPHFSL--------DHKK-HA----ECK--KITCADYHLAISSGI 144 (359)
T ss_pred cCCCEEEEcCHH---HHHHHHHHHHHhCCCCeEEEEecCcc--------cccc-hh----hhh--hhhcCCEEEEcCHHH
Confidence 789999999842 223455555555544 444555431 1111 10 111 126899999999999
Q ss_pred HHHHHHHhCCc---eEEEeCCCC-CCCC-CCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhccccccc
Q 011969 178 QHELAQNWGIK---ATVLYDQPP-EFFH-PTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDV 252 (474)
Q Consensus 178 ~~~l~~~~~~~---~~vi~n~~~-~~f~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (474)
++.+.+. +.+ +.++||+.+ +.+. +.+
T Consensus 145 ~~~~~~~-~~~~~ki~vi~N~id~~~~~~~~~------------------------------------------------ 175 (359)
T PRK09922 145 KEQMMAR-GISAQRISVIYNPVEIKTIIIPPP------------------------------------------------ 175 (359)
T ss_pred HHHHHHc-CCCHHHEEEEcCCCCHHHccCCCc------------------------------------------------
Confidence 9998764 543 889999854 2221 110
Q ss_pred ccCCCCCeEEEEEeecc--cCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCChH
Q 011969 253 FLKPNRPALVVSSTSWT--PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKE 330 (474)
Q Consensus 253 ~~~~~~~~~i~~~G~l~--~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~ 330 (474)
..+.+..++|+|++. +.||++.+++++..+ .++++|+|+|+|++.+
T Consensus 176 --~~~~~~~i~~~Grl~~~~~k~~~~l~~a~~~~------------------------------~~~~~l~ivG~g~~~~ 223 (359)
T PRK09922 176 --ERDKPAVFLYVGRLKFEGQKNVKELFDGLSQT------------------------------TGEWQLHIIGDGSDFE 223 (359)
T ss_pred --ccCCCcEEEEEEEEecccCcCHHHHHHHHHhh------------------------------CCCeEEEEEeCCccHH
Confidence 011233899999986 459999999999875 2479999999999999
Q ss_pred HHHHHHHHcCC-CcEEEecCCCC--cccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEec-cccccccccc
Q 011969 331 SYEEKIRRLRL-KRVAFRTMWLS--AEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS-YSCIEELVKV 406 (474)
Q Consensus 331 ~~~~~~~~l~l-~~V~f~g~~v~--~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~-~~~~~e~v~~ 406 (474)
++++.++++++ ++|.|.|. ++ .+++..+|..||++|+ +|..|+||++++||||||+|||+++ .++..|++.+
T Consensus 224 ~l~~~~~~~~l~~~v~f~G~-~~~~~~~~~~~~~~~d~~v~---~s~~Egf~~~~lEAma~G~Pvv~s~~~~g~~eiv~~ 299 (359)
T PRK09922 224 KCKAYSRELGIEQRIIWHGW-QSQPWEVVQQKIKNVSALLL---TSKFEGFPMTLLEAMSYGIPCISSDCMSGPRDIIKP 299 (359)
T ss_pred HHHHHHHHcCCCCeEEEecc-cCCcHHHHHHHHhcCcEEEE---CCcccCcChHHHHHHHcCCCEEEeCCCCChHHHccC
Confidence 99999999998 69999997 64 4788999999999999 6888999999999999999999999 8999999999
Q ss_pred CCcEEEeC--CHHHHHHHHHHHHhCCCCCHH--HHHHHHHHHHHhc
Q 011969 407 DKNGLLFS--SSSELADQLLMLFKGFPDDSD--VLKKLRNGTLEMG 448 (474)
Q Consensus 407 ~~~G~l~~--~~~~la~~i~~l~~~~~~~~~--~~~~~~~~~~~~~ 448 (474)
+.+|++++ |+++++++|..++++ ++ ..+.++++++++.
T Consensus 300 ~~~G~lv~~~d~~~la~~i~~l~~~----~~~~~~~~~~~~~~~~~ 341 (359)
T PRK09922 300 GLNGELYTPGNIDEFVGKLNKVISG----EVKYQHDAIPNSIERFY 341 (359)
T ss_pred CCceEEECCCCHHHHHHHHHHHHhC----cccCCHHHHHHHHHHhh
Confidence 99999985 799999999999996 33 3455566666544
|
|
| >TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-28 Score=254.18 Aligned_cols=346 Identities=15% Similarity=0.119 Sum_probs=223.8
Q ss_pred CCCCchHHHHHHHHHhhCCCeEEEEecCCCCCCcceec-----cCCeEEEEeecCCCCCCCC----CchhHHHHHHHHHH
Q 011969 15 LGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILE-----HPSIHIHTMTQWPTIPRGL----PKVLKPVLLLLKPL 85 (474)
Q Consensus 15 ~g~~~r~~~~a~~l~~~~g~eV~Vv~~~~~~~~~~~~~-----~~gi~i~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 85 (474)
-|+.-|+.+.+..|++. |+|++++........+... .+.+.+...+......+.. ...+...... .-
T Consensus 14 ~G~~~r~~~~~~~L~~~--~~v~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~--~~ 89 (397)
T TIGR03087 14 KGDKIRSFHLLRHLAAR--HRVHLGTFVDDPEDWQYAAALRPLCEEVCVVPLDPRVARLRSLLGLLTGEPLSLPYY--RS 89 (397)
T ss_pred CCCcEeHHHHHHHHHhc--CcEEEEEeCCCcccHHHHHHHHHHhheeEEeecCcHHHHHHHHhhhcCCCCCcchhh--CC
Confidence 47778999999999885 9999999764322111100 2233332222000000000 0000000000 00
Q ss_pred HHHHHHHHHHhhhcCCCCEEEEeCCCChhHHHHHHHHH-hhCCCcEEEEecCchhhhhhhcc----CCCchHH----HHH
Q 011969 86 IQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWAS-SLRRSAFIVDWHNFGYTLLSLSL----GRRSHFV----SIY 156 (474)
Q Consensus 86 ~~~~~~~~~~~~~~~~~Dvi~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~h~~~~~~~~~~~----~~~~~~~----~~~ 156 (474)
.++...+..++. ..++|+||++++... ..+. +..+.|+|++.||.......... ...+.+. +.+
T Consensus 90 ~~~~~~l~~~~~-~~~~D~v~~~~~~~~------~~~~~~~~~~p~i~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (397)
T TIGR03087 90 RRLARWVNALLA-AEPVDAIVVFSSAMA------QYVTPHVRGVPRIVDFVDVDSDKWLQYARTKRWPLRWIYRREGRLL 162 (397)
T ss_pred HHHHHHHHHHHh-hCCCCEEEEeccccc------eeccccccCCCeEeehhhHHHHHHHHHHhccCcchhHHHHHHHHHH
Confidence 111112223332 278999999984322 2222 35678999999986421111111 1111111 234
Q ss_pred HHHHHHHhhhcCEEEEeCHHHHHHHHHHhC---CceEEEeCCCC-CCCCCCChHHHHHHHHhhhhccCCCCCcccccccc
Q 011969 157 RWIEKYYGKMANGCLCVTQAMQHELAQNWG---IKATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNA 232 (474)
Q Consensus 157 ~~~e~~~~~~ad~vi~vS~~~~~~l~~~~~---~~~~vi~n~~~-~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 232 (474)
..+|+.+.+.+|.++++|+..++.+.+..+ .++.+++||.+ +.|.+..... +
T Consensus 163 ~~~e~~~~~~ad~vi~~S~~~~~~l~~~~~~~~~~v~vipngvd~~~f~~~~~~~--------~---------------- 218 (397)
T TIGR03087 163 LAYERAIAARFDAATFVSRAEAELFRRLAPEAAGRITAFPNGVDADFFSPDRDYP--------N---------------- 218 (397)
T ss_pred HHHHHHHHhhCCeEEEcCHHHHHHHHHhCCCCCCCeEEeecccchhhcCCCcccc--------C----------------
Confidence 568999999999999999999999887543 34889999954 5554432100 0
Q ss_pred ccCCcCcchhhhhcccccccccCCCCCeEEEEEeecccCCCHHHHHHHH----HHhHHHHhhhhccCCCchhhHhHhhhc
Q 011969 233 GMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAA----LMYDRRVAAILNEDDSTNEEVFLKEIS 308 (474)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~l~~~k~~~~Li~a~----~~l~~~~~~~~~~~~~~~~~~~~~~~~ 308 (474)
...++.+ .++|+|++.+.||++.++.++ ..+.++
T Consensus 219 --------------------~~~~~~~-~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~--------------------- 256 (397)
T TIGR03087 219 --------------------PYPPGKR-VLVFTGAMDYWPNIDAVVWFAERVFPAVRAR--------------------- 256 (397)
T ss_pred --------------------CCCCCCc-EEEEEEecCCccCHHHHHHHHHHHHHHHHHH---------------------
Confidence 0112233 899999999999999988544 444432
Q ss_pred CCccccCCCEEEEEEeCCCChHHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCC-CCCCCchHHHHHH
Q 011969 309 DGKQYLYPRLLFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSS-SGLDLPMKVVDMF 386 (474)
Q Consensus 309 ~~~~~~~~~~~l~ivG~g~~~~~~~~~~~~l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s-~~e~~p~kv~Eam 386 (474)
.|+++|+|+|+|+.. + +++++. ++|.|+|. ++ ++..+|+.||++|+| + .++|+|+|++|||
T Consensus 257 ------~p~~~l~ivG~g~~~-~----~~~l~~~~~V~~~G~-v~--~~~~~~~~adv~v~P---s~~~eG~~~~~lEAm 319 (397)
T TIGR03087 257 ------RPAAEFYIVGAKPSP-A----VRALAALPGVTVTGS-VA--DVRPYLAHAAVAVAP---LRIARGIQNKVLEAM 319 (397)
T ss_pred ------CCCcEEEEECCCChH-H----HHHhccCCCeEEeee-cC--CHHHHHHhCCEEEec---ccccCCcccHHHHHH
Confidence 689999999999853 2 334443 68999998 64 799999999999995 5 4689999999999
Q ss_pred hcCCcEEEecccccccccccCCcEEEeC-CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc-cccchHHHHHH
Q 011969 387 GCGLPVCAVSYSCIEELVKVDKNGLLFS-SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARWATEWEE 459 (474)
Q Consensus 387 a~G~PVia~~~~~~~e~v~~~~~G~l~~-~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~~~ 459 (474)
|||+|||+|+.++ ..+...+++|+++. |+++++++|.+++++ ++.+++|++++++.+ +.++|+...++
T Consensus 320 a~G~PVV~t~~~~-~~i~~~~~~g~lv~~~~~~la~ai~~ll~~----~~~~~~~~~~ar~~v~~~fsw~~~~~~ 389 (397)
T TIGR03087 320 AMAKPVVASPEAA-EGIDALPGAELLVAADPADFAAAILALLAN----PAEREELGQAARRRVLQHYHWPRNLAR 389 (397)
T ss_pred HcCCCEEecCccc-ccccccCCcceEeCCCHHHHHHHHHHHHcC----HHHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 9999999998653 33344556788875 899999999999984 888999999999876 57888876655
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-28 Score=248.71 Aligned_cols=250 Identities=16% Similarity=0.155 Sum_probs=188.2
Q ss_pred cCCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchh---h---hhhhccCC-C----chHHHHHHHHHHHHhhhc
Q 011969 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGY---T---LLSLSLGR-R----SHFVSIYRWIEKYYGKMA 167 (474)
Q Consensus 99 ~~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~---~---~~~~~~~~-~----~~~~~~~~~~e~~~~~~a 167 (474)
..++|+|+++++... . .+....+.|.+.++|.... . ......+. . ..+...++.+++...+.+
T Consensus 81 ~~~~D~v~~~~~~~~--~----~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (351)
T cd03804 81 LSGYDLVISSSHAVA--K----GVITRPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRIWDRRSAARV 154 (351)
T ss_pred ccCCCEEEEcCcHHh--c----cccCCCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHHHHHHHHhcCC
Confidence 378999998773211 1 1114567888888886421 0 00001111 1 112344566777788999
Q ss_pred CEEEEeCHHHHHHHHHHhCCceEEEeCCCC-CCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhc
Q 011969 168 NGCLCVTQAMQHELAQNWGIKATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTS 246 (474)
Q Consensus 168 d~vi~vS~~~~~~l~~~~~~~~~vi~n~~~-~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (474)
|.++++|+.+++.+.+.++.+..+++|+.+ +.|.+..
T Consensus 155 d~ii~~S~~~~~~~~~~~~~~~~vi~~~~d~~~~~~~~------------------------------------------ 192 (351)
T cd03804 155 DYFIANSRFVARRIKKYYGRDATVIYPPVDTDRFTPAE------------------------------------------ 192 (351)
T ss_pred CEEEECCHHHHHHHHHHhCCCcEEECCCCCHhhcCcCC------------------------------------------
Confidence 999999999999998877888889988743 3332221
Q ss_pred ccccccccCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCC
Q 011969 247 LAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKG 326 (474)
Q Consensus 247 ~~~~~~~~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g 326 (474)
...+ .++|+|++.+.||++.+++|+..+ + ++|+|+|+|
T Consensus 193 ---------~~~~-~il~~G~~~~~K~~~~li~a~~~~-------------------------------~-~~l~ivG~g 230 (351)
T cd03804 193 ---------EKED-YYLSVGRLVPYKRIDLAIEAFNKL-------------------------------G-KRLVVIGDG 230 (351)
T ss_pred ---------CCCC-EEEEEEcCccccChHHHHHHHHHC-------------------------------C-CcEEEEECC
Confidence 1122 689999999999999999999764 4 789999999
Q ss_pred CChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEeccccccccccc
Q 011969 327 PDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKV 406 (474)
Q Consensus 327 ~~~~~~~~~~~~l~l~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~~~~e~v~~ 406 (474)
++.+++++ ...++|.|.|. ++.+++..+|+.||++++ |+. |++|++++||||||+|||+++.++..|++.+
T Consensus 231 ~~~~~l~~----~~~~~V~~~g~-~~~~~~~~~~~~ad~~v~---ps~-e~~g~~~~Eama~G~Pvi~~~~~~~~e~i~~ 301 (351)
T cd03804 231 PELDRLRA----KAGPNVTFLGR-VSDEELRDLYARARAFLF---PAE-EDFGIVPVEAMASGTPVIAYGKGGALETVID 301 (351)
T ss_pred hhHHHHHh----hcCCCEEEecC-CCHHHHHHHHHhCCEEEE---CCc-CCCCchHHHHHHcCCCEEEeCCCCCcceeeC
Confidence 87766655 22279999998 999999999999999999 567 9999999999999999999999999999999
Q ss_pred CCcEEEeC--CHHHHHHHHHHHHhCCCCCH-HHHHHHHHHHHHhccccchHH
Q 011969 407 DKNGLLFS--SSSELADQLLMLFKGFPDDS-DVLKKLRNGTLEMGLSARWAT 455 (474)
Q Consensus 407 ~~~G~l~~--~~~~la~~i~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~w~~ 455 (474)
+.+|++++ |+++++++|..++++ + ...+++++++. +++|+.
T Consensus 302 ~~~G~~~~~~~~~~la~~i~~l~~~----~~~~~~~~~~~~~----~~~~~~ 345 (351)
T cd03804 302 GVTGILFEEQTVESLAAAVERFEKN----EDFDPQAIRAHAE----RFSESR 345 (351)
T ss_pred CCCEEEeCCCCHHHHHHHHHHHHhC----cccCHHHHHHHHH----hcCHHH
Confidence 99999985 699999999999986 3 44566666664 455554
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. |
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-27 Score=241.87 Aligned_cols=325 Identities=16% Similarity=0.169 Sum_probs=224.7
Q ss_pred ceEEEEEeCCCCCCchHH-HHHHHHHhhCCCeEEEEecCCCCCCcceeccCCeEEEEeecCCCCCCCCCchhHHHHHHHH
Q 011969 5 GRACVVVLGDLGRSPRMQ-YQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLK 83 (474)
Q Consensus 5 ~~~~i~~~~~~g~~~r~~-~~a~~l~~~~g~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (474)
|++.+......||..+.. ..+..|.+. ||+|++++.... .+.+
T Consensus 2 kIl~~~~~~~~gG~~~~~~~l~~~l~~~-G~~v~v~~~~~~-----------------------------------~~~~ 45 (365)
T cd03825 2 KVLHLNTSDISGGAARAAYRLHRALQAA-GVDSTMLVQEKK-----------------------------------ALIS 45 (365)
T ss_pred eEEEEecCCCCCcHHHHHHHHHHHHHhc-CCceeEEEeecc-----------------------------------hhhh
Confidence 344443333347766655 455677775 999999997643 0000
Q ss_pred HHHHHHHHHHHHhhhcCCCCEEEEeCCCChhHHHHHHHHHhh-CCCcEEEEecCchhhhhhhcc----------------
Q 011969 84 PLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSL-RRSAFIVDWHNFGYTLLSLSL---------------- 146 (474)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~Dvi~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~~---------------- 146 (474)
.+ +..+||+||+|.+...... ...+.++ +++|+|+++|+++........
T Consensus 46 ~~------------~~~~~diih~~~~~~~~~~--~~~~~~~~~~~~~v~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (365)
T cd03825 46 KI------------EIINADIVHLHWIHGGFLS--IEDLSKLLDRKPVVWTLHDMWPFTGGCHYPGGCDRYKTECGNCPQ 111 (365)
T ss_pred Ch------------hcccCCEEEEEccccCccC--HHHHHHHHcCCCEEEEcccCcccccccCCccccccccccCCCCCC
Confidence 01 2278999999885433211 2223333 589999999987421110000
Q ss_pred -CCC---chHHHHHHHHHHHHhhhcCEEEEeCHHHHHHHHHHhC---CceEEEeCCCC-CCCCCCChHHHHHHHHhhhhc
Q 011969 147 -GRR---SHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQNWG---IKATVLYDQPP-EFFHPTSLEEKHELFCRLNKI 218 (474)
Q Consensus 147 -~~~---~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~~l~~~~~---~~~~vi~n~~~-~~f~~~~~~~~~~~~~~l~~~ 218 (474)
... .......+...+.+...++.++++|+.+++.+.+.+. .++.+++|+.+ +.|.+... ...+..++
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~~---~~~~~~~~-- 186 (365)
T cd03825 112 LGSYPEKDLSRWIWRRKRKAWADLNLTIVAPSRWLADCARSSSLFKGIPIEVIPNGIDTTIFRPRDK---REARKRLG-- 186 (365)
T ss_pred CCCCCcccHHHHHHHHHHHHhccCCcEEEehhHHHHHHHHhccccCCCceEEeCCCCcccccCCCcH---HHHHHHhC--
Confidence 000 0112333333344445678999999999988887642 45899999954 55545432 22333333
Q ss_pred cCCCCCccccccccccCCcCcchhhhhcccccccccCCCCCeEEEEEeeccc--CCCHHHHHHHHHHhHHHHhhhhccCC
Q 011969 219 LHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTP--DEDFGILLEAALMYDRRVAAILNEDD 296 (474)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~l~~--~k~~~~Li~a~~~l~~~~~~~~~~~~ 296 (474)
++++.. +++++|+... .||++.+++++..+.++
T Consensus 187 -----------------------------------~~~~~~-~i~~~~~~~~~~~K~~~~ll~a~~~l~~~--------- 221 (365)
T cd03825 187 -----------------------------------LPADKK-IILFGAVGGTDPRKGFDELIEALKRLAER--------- 221 (365)
T ss_pred -----------------------------------CCCCCe-EEEEEecCCCccccCHHHHHHHHHHhhhc---------
Confidence 223333 6666666655 89999999999988651
Q ss_pred CchhhHhHhhhcCCccccCCCEEEEEEeCCCChHHHHHHHHHcCC-CcEEEecCCCC-cccHHHHHhcccEEEeeccCCC
Q 011969 297 STNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLS-AEDYPLLLGSADLGVCLHTSSS 374 (474)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~~~l~l-~~V~f~g~~v~-~~~~~~~l~~adv~v~~~~~s~ 374 (474)
..++++++++|.++..... +. .+|.|+|. ++ .+++..+|+.||++++ ||.
T Consensus 222 -----------------~~~~~~~~i~G~~~~~~~~-------~~~~~v~~~g~-~~~~~~~~~~~~~ad~~l~---ps~ 273 (365)
T cd03825 222 -----------------WKDDIELVVFGASDPEIPP-------DLPFPVHYLGS-LNDDESLALIYSAADVFVV---PSL 273 (365)
T ss_pred -----------------cCCCeEEEEeCCCchhhhc-------cCCCceEecCC-cCCHHHHHHHHHhCCEEEe---ccc
Confidence 2478999999988754321 33 58999998 77 7899999999999999 687
Q ss_pred CCCCchHHHHHHhcCCcEEEecccccccccccCCcEEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc-ccc
Q 011969 375 GLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSA 451 (474)
Q Consensus 375 ~e~~p~kv~Eama~G~PVia~~~~~~~e~v~~~~~G~l~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~-~~~ 451 (474)
.|++|.+++|||+||+|||+++.+++.|++.++.+|++++ |+++++++|.+++++ ++.++++++++++.. +.+
T Consensus 274 ~e~~g~~~~Eam~~g~PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~~~----~~~~~~~~~~~~~~~~~~~ 349 (365)
T cd03825 274 QENFPNTAIEALACGTPVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLLAD----PDEREELGEAARELAENEF 349 (365)
T ss_pred cccccHHHHHHHhcCCCEEEecCCCChhheeCCCceEEeCCCCHHHHHHHHHHHHhC----HHHHHHHHHHHHHHHHHhc
Confidence 8999999999999999999999999999999988999986 799999999999984 788899999998866 467
Q ss_pred chHHHHHHHH
Q 011969 452 RWATEWEEHA 461 (474)
Q Consensus 452 ~w~~~~~~~~ 461 (474)
+|+...++..
T Consensus 350 s~~~~~~~~~ 359 (365)
T cd03825 350 DSRVQAKRYL 359 (365)
T ss_pred CHHHHHHHHH
Confidence 7776655533
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. |
| >TIGR02918 accessory Sec system glycosylation protein GtfA | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.8e-28 Score=257.67 Aligned_cols=270 Identities=13% Similarity=0.214 Sum_probs=206.1
Q ss_pred CCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCch-HHHHHHHHHHHHhhhcCEEEEeCHHHH
Q 011969 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSH-FVSIYRWIEKYYGKMANGCLCVTQAMQ 178 (474)
Q Consensus 100 ~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~ad~vi~vS~~~~ 178 (474)
.++|++|+..++.... .++.....+|+++.+|+-.+... ....... +...+.+. ....+.+|.+|++|+..+
T Consensus 210 ~~~di~i~dr~~~~~~----~~~~~~~~~~~v~~lH~~h~~~~--~~~~~~~~~~~~y~~~-~~~~~~~D~iI~~S~~~~ 282 (500)
T TIGR02918 210 TKKDIIILDRSTGIGQ----AVLENKGPAKLGVVVHAEHFSES--ATNETYILWNNYYEYQ-FSNADYIDFFITATDIQN 282 (500)
T ss_pred CCCCEEEEcCCcccch----HHHhcCCCceEEEEEChhhhcCc--cCcchhHHHHHHHHHH-HhchhhCCEEEECCHHHH
Confidence 6899999988654221 12344557899999997532111 0111111 11222221 122457899999999998
Q ss_pred HHHHHHhC------CceEEEeCCCCC-CCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhcccccc
Q 011969 179 HELAQNWG------IKATVLYDQPPE-FFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGID 251 (474)
Q Consensus 179 ~~l~~~~~------~~~~vi~n~~~~-~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (474)
+.+.+.++ .++.++|+|..+ .+.+.
T Consensus 283 ~~l~~~~~~~~~~~~ki~viP~g~~~~~~~~~------------------------------------------------ 314 (500)
T TIGR02918 283 QILKNQFKKYYNIEPRIYTIPVGSLDELQYPE------------------------------------------------ 314 (500)
T ss_pred HHHHHHhhhhcCCCCcEEEEcCCCcccccCcc------------------------------------------------
Confidence 88876553 237889988432 22111
Q ss_pred cccCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCChHH
Q 011969 252 VFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKES 331 (474)
Q Consensus 252 ~~~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~ 331 (474)
....+..++++||+.+.||++.|++|+..+.+. .|+++|.|+|+|++.+.
T Consensus 315 ---~~r~~~~il~vGrl~~~Kg~~~li~A~~~l~~~---------------------------~p~~~l~i~G~G~~~~~ 364 (500)
T TIGR02918 315 ---QERKPFSIITASRLAKEKHIDWLVKAVVKAKKS---------------------------VPELTFDIYGEGGEKQK 364 (500)
T ss_pred ---cccCCeEEEEEeccccccCHHHHHHHHHHHHhh---------------------------CCCeEEEEEECchhHHH
Confidence 012234799999999999999999999998773 78999999999999999
Q ss_pred HHHHHHHcCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEeccc-ccccccccCCc
Q 011969 332 YEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS-CIEELVKVDKN 409 (474)
Q Consensus 332 ~~~~~~~l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~-~~~e~v~~~~~ 409 (474)
+++.++++++ ++|.|.|. .++..+|+.||++|+ ||..|+||++++||||||+|||+++.+ |.+|+|.++.+
T Consensus 365 l~~~i~~~~l~~~V~f~G~----~~~~~~~~~adv~v~---pS~~Egfgl~~lEAma~G~PVI~~dv~~G~~eiI~~g~n 437 (500)
T TIGR02918 365 LQKIINENQAQDYIHLKGH----RNLSEVYKDYELYLS---ASTSEGFGLTLMEAVGSGLGMIGFDVNYGNPTFIEDNKN 437 (500)
T ss_pred HHHHHHHcCCCCeEEEcCC----CCHHHHHHhCCEEEE---cCccccccHHHHHHHHhCCCEEEecCCCCCHHHccCCCC
Confidence 9999999998 78999996 378899999999999 788999999999999999999999985 89999999999
Q ss_pred EEEeC-C---------HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHH
Q 011969 410 GLLFS-S---------SSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITE 467 (474)
Q Consensus 410 G~l~~-~---------~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 467 (474)
|++++ + +++|+++|..+++ ++.+++|++++++.+++++|+..|++.. .++++
T Consensus 438 G~lv~~~~~~~d~~~~~~~la~~I~~ll~-----~~~~~~~~~~a~~~a~~fs~~~v~~~w~-~ll~~ 499 (500)
T TIGR02918 438 GYLIPIDEEEDDEDQIITALAEKIVEYFN-----SNDIDAFHEYSYQIAEGFLTANIIEKWK-KLVRE 499 (500)
T ss_pred EEEEeCCccccchhHHHHHHHHHHHHHhC-----hHHHHHHHHHHHHHHHhcCHHHHHHHHH-HHHhh
Confidence 99986 1 7889999999985 3468999999999888999998886644 45544
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. |
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-27 Score=250.58 Aligned_cols=266 Identities=18% Similarity=0.204 Sum_probs=203.6
Q ss_pred CCCCEEEEeCCCChhHHHHHHHHHhhCC-CcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhhhcCEEEEeCHHHH
Q 011969 100 ASPDVFLVQNPPSVPTLVAVKWASSLRR-SAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178 (474)
Q Consensus 100 ~~~Dvi~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~ 178 (474)
.++|++|.+-. ..+......+++..+ .++|.+.|+..... ... ...+..+.+.+.+.+|.++++|+..+
T Consensus 126 ~~~~v~~sy~~--~~~~~~~~~l~~~~~~~~~i~~~Hg~d~~~-----~~~---~~~~~~~~~~~~~~~d~ii~~S~~~~ 195 (407)
T cd04946 126 GQGTVFYSYWL--HETAYALALLKKEYLRKRVISRAHGYDLYE-----DRY---PSGYIPLRRYLLSSLDAVFPCSEQGR 195 (407)
T ss_pred cCceEEEEecC--chHHHHHHHHHHhcCCceEEEEeccchhhh-----hhc---cccchHHHHHHHhcCCEEEECCHHHH
Confidence 45566666542 233333333344333 45999999763100 000 01112445556789999999999999
Q ss_pred HHHHHHhCCc---eEEEeCCCC-CCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhccccccccc
Q 011969 179 HELAQNWGIK---ATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFL 254 (474)
Q Consensus 179 ~~l~~~~~~~---~~vi~n~~~-~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (474)
+++.+.++.. +.++++|.+ ..+.+. .
T Consensus 196 ~~l~~~~~~~~~ki~vi~~gv~~~~~~~~--------------------------------------------------~ 225 (407)
T cd04946 196 NYLQKRYPAYKEKIKVSYLGVSDPGIISK--------------------------------------------------P 225 (407)
T ss_pred HHHHHHCCCccccEEEEECCcccccccCC--------------------------------------------------C
Confidence 9999887653 678888844 222111 0
Q ss_pred CCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCC--CEEEEEEeCCCChHHH
Q 011969 255 KPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYP--RLLFIITGKGPDKESY 332 (474)
Q Consensus 255 ~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~ivG~g~~~~~~ 332 (474)
..+.+..++++|++.+.||++.+++|+..+.++ .| +++++++|+|+..+.+
T Consensus 226 ~~~~~~~il~~Grl~~~Kg~~~li~a~~~l~~~---------------------------~p~~~l~~~iiG~g~~~~~l 278 (407)
T cd04946 226 SKDDTLRIVSCSYLVPVKRVDLIIKALAALAKA---------------------------RPSIKIKWTHIGGGPLEDTL 278 (407)
T ss_pred CCCCCEEEEEeeccccccCHHHHHHHHHHHHHh---------------------------CCCceEEEEEEeCchHHHHH
Confidence 022345899999999999999999999998773 44 5778999999999999
Q ss_pred HHHHHHcCC-CcEEEecCCCCcccHHHHHhc--ccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecccccccccccCCc
Q 011969 333 EEKIRRLRL-KRVAFRTMWLSAEDYPLLLGS--ADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKN 409 (474)
Q Consensus 333 ~~~~~~l~l-~~V~f~g~~v~~~~~~~~l~~--adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~~~~e~v~~~~~ 409 (474)
++.+++++. ++|.|+|. ++.+++..+|+. +|++++ +|..|++|++++||||||+|||+++.++..|++.++.+
T Consensus 279 ~~~~~~~~~~~~V~f~G~-v~~~e~~~~~~~~~~~v~v~---~S~~Eg~p~~llEAma~G~PVIas~vgg~~e~i~~~~~ 354 (407)
T cd04946 279 KELAESKPENISVNFTGE-LSNSEVYKLYKENPVDVFVN---LSESEGLPVSIMEAMSFGIPVIATNVGGTPEIVDNGGN 354 (407)
T ss_pred HHHHHhcCCCceEEEecC-CChHHHHHHHhhcCCCEEEe---CCccccccHHHHHHHHcCCCEEeCCCCCcHHHhcCCCc
Confidence 999988777 68999998 999999999986 678888 78899999999999999999999999999999999999
Q ss_pred EEEeC---CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc-cccchHHHHHHH
Q 011969 410 GLLFS---SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARWATEWEEH 460 (474)
Q Consensus 410 G~l~~---~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~~~~ 460 (474)
|++++ |+++++++|.++++ |++.+++|++++++.. ++++|+....+.
T Consensus 355 G~l~~~~~~~~~la~~I~~ll~----~~~~~~~m~~~ar~~~~~~f~~~~~~~~~ 405 (407)
T cd04946 355 GLLLSKDPTPNELVSSLSKFID----NEEEYQTMREKAREKWEENFNASKNYREF 405 (407)
T ss_pred EEEeCCCCCHHHHHHHHHHHHh----CHHHHHHHHHHHHHHHHHHcCHHHhHHHh
Confidence 99984 58999999999998 4899999999999875 678887766554
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. |
| >PRK10125 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-26 Score=242.96 Aligned_cols=350 Identities=12% Similarity=0.048 Sum_probs=213.0
Q ss_pred CceEEEEEeCCCCCCchHHHH-HHHHHhhCCCeEEEEecCCCCCCcceeccCCe-EEEEeecCCCCCCCCCchhHHHHHH
Q 011969 4 RGRACVVVLGDLGRSPRMQYQ-ALSLARQMSLEVDVVAYGGSKPHAAILEHPSI-HIHTMTQWPTIPRGLPKVLKPVLLL 81 (474)
Q Consensus 4 ~~~~~i~~~~~~g~~~r~~~~-a~~l~~~~g~eV~Vv~~~~~~~~~~~~~~~gi-~i~~~~~~~~~~~~~~~~~~~~~~~ 81 (474)
||++.|......|+++|+... +..+.++ ||+|+++...+..+.... ...++ ..+... ++....+...
T Consensus 1 mkil~i~~~l~~GGaeri~~~L~~~l~~~-G~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~---------~~~~~~~~~~ 69 (405)
T PRK10125 1 MNILQFNVRLAEGGAAGVALDLHQRALQQ-GLASHFVYGYGKGGKESV-SHQNYPQVIKHT---------PRMTAMANIA 69 (405)
T ss_pred CeEEEEEeeecCCchhHHHHHHHHHHHhc-CCeEEEEEecCCCccccc-ccCCcceEEEec---------ccHHHHHHHH
Confidence 467888877778999998765 4556665 999999997765443211 11122 112222 1111111111
Q ss_pred H------HHHHHHHHHHHHHhhhcCCCCEEEEeCCCChh-HH-HHHHH----HHhhCCCcEEEEecCchhh---------
Q 011969 82 L------KPLIQFFMLLWFLCVKIASPDVFLVQNPPSVP-TL-VAVKW----ASSLRRSAFIVDWHNFGYT--------- 140 (474)
Q Consensus 82 ~------~~~~~~~~~~~~~~~~~~~~Dvi~~~~~~~~~-~~-~~~~~----~~~~~~~~~i~~~h~~~~~--------- 140 (474)
. ..+.... -+..++.+..+|||||+|+..... .. .+..+ ..+..++|+|+|.||.|.-
T Consensus 70 ~~~~~~~~~~~~~~-~~~~~i~~~~~pDviHlH~~~~~~~~~~~l~~~~~~~~~~~~~~piV~TlHd~~~~tg~c~~~~~ 148 (405)
T PRK10125 70 LFRLFNRDLFGNFN-ELYRTITRTPGPVVLHFHVLHSYWLNLKSVVRFCEKVKNHKPDVTLVWTLHDHWSVTGRCAFTDG 148 (405)
T ss_pred HHHhcchhhcchHH-HHHHHHhhccCCCEEEEecccCceecHHHHHHHHhhhhcccCCCCEEEecccccccCCCcCCCcc
Confidence 0 0000000 111122234799999999865321 11 11221 1123468999999998621
Q ss_pred --hhhhcc--------CCCchH---HHHH---HHHHHHHhhhcCEEEEeCHHHHHHHHHHhCC-ceEEEeCCCC-CCCCC
Q 011969 141 --LLSLSL--------GRRSHF---VSIY---RWIEKYYGKMANGCLCVTQAMQHELAQNWGI-KATVLYDQPP-EFFHP 202 (474)
Q Consensus 141 --~~~~~~--------~~~~~~---~~~~---~~~e~~~~~~ad~vi~vS~~~~~~l~~~~~~-~~~vi~n~~~-~~f~~ 202 (474)
...... .+...+ .+.+ +..-+...+.++.++++|+.+++.+.+.++. ++.+|+||.+ +.+.+
T Consensus 149 C~~~~~~c~~Cp~l~~~~~~~~d~~~~~~~~k~~~~~~~~~~~~~iV~~S~~l~~~~~~~~~~~~i~vI~NGid~~~~~~ 228 (405)
T PRK10125 149 CEGWKTGCQKCPTLNNYPPVKVDRAHQLVAGKRQLFREMLALGCQFISPSQHVADAFNSLYGPGRCRIINNGIDMATEAI 228 (405)
T ss_pred cccccccCCCCCCccCCCCCccchHHHHHHHHHHHHHHHhhcCcEEEEcCHHHHHHHHHHcCCCCEEEeCCCcCcccccc
Confidence 000000 011111 1111 1222222345689999999999988776653 4899999955 21211
Q ss_pred CChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhcccccccccCCCCCeEEEEEeec--ccCCCHHHHHHH
Q 011969 203 TSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSW--TPDEDFGILLEA 280 (474)
Q Consensus 203 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~l--~~~k~~~~Li~a 280 (474)
.+. .... ...++.+ +++++|+. .+.||++.|++|
T Consensus 229 ~~~--~~~~-----------------------------------------~~~~~~~-~il~v~~~~~~~~Kg~~~li~A 264 (405)
T PRK10125 229 LAE--LPPV-----------------------------------------RETQGKP-KIAVVAHDLRYDGKTDQQLVRE 264 (405)
T ss_pred ccc--cccc-----------------------------------------ccCCCCC-EEEEEEeccccCCccHHHHHHH
Confidence 110 0000 0112333 78889984 477999999999
Q ss_pred HHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHH
Q 011969 281 ALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLL 360 (474)
Q Consensus 281 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~~~l~l~~V~f~g~~v~~~~~~~~l 360 (474)
+..+ .++++|+|+|+|+... .++|.++|..-+.+++..+|
T Consensus 265 ~~~l------------------------------~~~~~L~ivG~g~~~~----------~~~v~~~g~~~~~~~l~~~y 304 (405)
T PRK10125 265 MMAL------------------------------GDKIELHTFGKFSPFT----------AGNVVNHGFETDKRKLMSAL 304 (405)
T ss_pred HHhC------------------------------CCCeEEEEEcCCCccc----------ccceEEecCcCCHHHHHHHH
Confidence 9875 3579999999875421 14688888733568899999
Q ss_pred hcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecccccccccccCCcEEEeC--CHHHHHHHHHHHHhCCCCCHHHHH
Q 011969 361 GSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLK 438 (474)
Q Consensus 361 ~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~~~~e~v~~~~~G~l~~--~~~~la~~i~~l~~~~~~~~~~~~ 438 (474)
+.||++|+ ||..|+||++++||||||+|||+|+.||++|++.++ +|++++ |+++|++.+.. +..+
T Consensus 305 ~~aDvfV~---pS~~Egfp~vilEAmA~G~PVVat~~gG~~Eiv~~~-~G~lv~~~d~~~La~~~~~---------~~~~ 371 (405)
T PRK10125 305 NQMDALVF---SSRVDNYPLILCEALSIGVPVIATHSDAAREVLQKS-GGKTVSEEEVLQLAQLSKP---------EIAQ 371 (405)
T ss_pred HhCCEEEE---CCccccCcCHHHHHHHcCCCEEEeCCCChHHhEeCC-cEEEECCCCHHHHHhccCH---------HHHH
Confidence 99999999 788999999999999999999999999999999764 999996 79999985432 2222
Q ss_pred H-H---HHHHHHh-ccccchHHHHHHHHH
Q 011969 439 K-L---RNGTLEM-GLSARWATEWEEHAK 462 (474)
Q Consensus 439 ~-~---~~~~~~~-~~~~~w~~~~~~~~~ 462 (474)
+ + .+.+++. .+.++|+...+++.+
T Consensus 372 ~~~~~~~~~~r~~~~~~fs~~~~~~~y~~ 400 (405)
T PRK10125 372 AVFGTTLAEFSQRSRAAYSGQQMLEEYVN 400 (405)
T ss_pred HhhhhHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 2 1 1223332 246888777766543
|
|
| >PLN02501 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-26 Score=247.35 Aligned_cols=246 Identities=12% Similarity=0.086 Sum_probs=179.4
Q ss_pred CCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCchHHH-HHHHHHHHHhhh-cCEEEEeCHHH
Q 011969 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVS-IYRWIEKYYGKM-ANGCLCVTQAM 177 (474)
Q Consensus 100 ~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~-ad~vi~vS~~~ 177 (474)
.+|||||+++|..+.....+...++..+ |+|..+|-.-..+... .....+.. +.+++.+++.+. ||.++++|..+
T Consensus 433 f~PDVVHLatP~~LGw~~~Glr~ArKl~-PVVasyHTny~eYl~~--y~~g~L~~~llk~l~~~v~r~hcD~VIaPS~at 509 (794)
T PLN02501 433 KDADIAILEEPEHLNWYHHGKRWTDKFN-HVVGVVHTNYLEYIKR--EKNGALQAFFVKHINNWVTRAYCHKVLRLSAAT 509 (794)
T ss_pred cCCCEEEECCchhhccHHHHHHHHHHcC-CeEEEEeCCcHHHHhH--hcchhHHHHHHHHHHHHHHHhhCCEEEcCCHHH
Confidence 7899999999865543311333344445 7888888652222211 12233333 233444444432 89999999888
Q ss_pred HHHHHHHhCCceEEEeCC-CCCCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhcccccccccCC
Q 011969 178 QHELAQNWGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKP 256 (474)
Q Consensus 178 ~~~l~~~~~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (474)
++ +.. ......+| ++++|+|..... .+.+++ ...
T Consensus 510 q~-L~~----~vI~nVnGVDte~F~P~~r~~---~~r~lg-------------------------------------i~~ 544 (794)
T PLN02501 510 QD-LPK----SVICNVHGVNPKFLKIGEKVA---EERELG-------------------------------------QQA 544 (794)
T ss_pred HH-hcc----cceeecccccccccCCcchhH---HHHhcC-------------------------------------Ccc
Confidence 83 321 21111257 457888764311 112233 111
Q ss_pred CCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCChHHHHHHH
Q 011969 257 NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKI 336 (474)
Q Consensus 257 ~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~ 336 (474)
. +..++|+|++.+.||++.|++|++.+.++ .|+++|+|+|+||+.+++++.+
T Consensus 545 ~-~kgiLfVGRLa~EKGld~LLeAla~L~~~---------------------------~pnvrLvIVGDGP~reeLe~la 596 (794)
T PLN02501 545 F-SKGAYFLGKMVWAKGYRELIDLLAKHKNE---------------------------LDGFNLDVFGNGEDAHEVQRAA 596 (794)
T ss_pred c-cCceEEEEcccccCCHHHHHHHHHHHHhh---------------------------CCCeEEEEEcCCccHHHHHHHH
Confidence 1 12578999999999999999999988763 5789999999999999999999
Q ss_pred HHcCCCcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecccccccccccCCcEEEeCCH
Q 011969 337 RRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSS 416 (474)
Q Consensus 337 ~~l~l~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~~~~e~v~~~~~G~l~~~~ 416 (474)
+++++ +|.|+|+ .++...+|+.+|+||+ ||..|+||++++||||||+|||+++.++. +.+.++.+|++..|+
T Consensus 597 ~eLgL-~V~FLG~---~dd~~~lyasaDVFVl---PS~sEgFGlVlLEAMA~GlPVVATd~pG~-e~V~~g~nGll~~D~ 668 (794)
T PLN02501 597 KRLDL-NLNFLKG---RDHADDSLHGYKVFIN---PSISDVLCTATAEALAMGKFVVCADHPSN-EFFRSFPNCLTYKTS 668 (794)
T ss_pred HHcCC-EEEecCC---CCCHHHHHHhCCEEEE---CCCcccchHHHHHHHHcCCCEEEecCCCC-ceEeecCCeEecCCH
Confidence 99987 5999998 6777899999999999 78899999999999999999999999885 447788899998899
Q ss_pred HHHHHHHHHHHhC
Q 011969 417 SELADQLLMLFKG 429 (474)
Q Consensus 417 ~~la~~i~~l~~~ 429 (474)
++++++|.+++.+
T Consensus 669 EafAeAI~~LLsd 681 (794)
T PLN02501 669 EDFVAKVKEALAN 681 (794)
T ss_pred HHHHHHHHHHHhC
Confidence 9999999999986
|
|
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-26 Score=236.84 Aligned_cols=267 Identities=18% Similarity=0.300 Sum_probs=207.2
Q ss_pred CCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhhhcCEEEEeCHHHHH
Q 011969 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179 (474)
Q Consensus 100 ~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~ 179 (474)
.++|+++++.+..... .+.......+.++.+|+....... ......+...++..... .+.+|.++++|+..++
T Consensus 98 ~~~diii~~~~~~~~~----~~~~~~~~~~~i~~~h~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~d~ii~~s~~~~~ 170 (372)
T cd04949 98 TKPDVFILDRPTLDGQ----ALLNMKKAAKVVVVLHSNHVSDNN--DPVHSLINNFYEYVFEN-LDKVDGVIVATEQQKQ 170 (372)
T ss_pred CCCCEEEECCccccch----hHHhccCCceEEEEEChHHhCCcc--cccccccchhhHHHHhC-hhhCCEEEEccHHHHH
Confidence 7899999988644332 123334456688899976321110 00011222323332222 4679999999999999
Q ss_pred HHHHHhCCc--eEEEeCCCC-CCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhcccccccccCC
Q 011969 180 ELAQNWGIK--ATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKP 256 (474)
Q Consensus 180 ~l~~~~~~~--~~vi~n~~~-~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (474)
.+.+.++.. +.++|++.. ..+.+.. ...
T Consensus 171 ~l~~~~~~~~~v~~ip~g~~~~~~~~~~-------------------------------------------------~~~ 201 (372)
T cd04949 171 DLQKQFGNYNPIYTIPVGSIDPLKLPAQ-------------------------------------------------FKQ 201 (372)
T ss_pred HHHHHhCCCCceEEEcccccChhhcccc-------------------------------------------------hhh
Confidence 998877653 788998854 2222210 001
Q ss_pred CCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCChHHHHHHH
Q 011969 257 NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKI 336 (474)
Q Consensus 257 ~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~ 336 (474)
..+..++++|++.+.||++.+++++..+.++ .|+++|+|+|.|+....+++.+
T Consensus 202 ~~~~~i~~vgrl~~~K~~~~li~a~~~l~~~---------------------------~~~~~l~i~G~g~~~~~~~~~~ 254 (372)
T cd04949 202 RKPHKIITVARLAPEKQLDQLIKAFAKVVKQ---------------------------VPDATLDIYGYGDEEEKLKELI 254 (372)
T ss_pred cCCCeEEEEEccCcccCHHHHHHHHHHHHHh---------------------------CCCcEEEEEEeCchHHHHHHHH
Confidence 2233789999999999999999999998873 7899999999999888888888
Q ss_pred HHcCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEeccc-ccccccccCCcEEEeC
Q 011969 337 RRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS-CIEELVKVDKNGLLFS 414 (474)
Q Consensus 337 ~~l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~-~~~e~v~~~~~G~l~~ 414 (474)
+++++ ++|.|.|. .+++..+|+.||++|+ +|..|++|++++|||+||+|||+++.+ +..+++.++.+|++++
T Consensus 255 ~~~~~~~~v~~~g~---~~~~~~~~~~ad~~v~---~S~~Eg~~~~~lEAma~G~PvI~~~~~~g~~~~v~~~~~G~lv~ 328 (372)
T cd04949 255 EELGLEDYVFLKGY---TRDLDEVYQKAQLSLL---TSQSEGFGLSLMEALSHGLPVISYDVNYGPSEIIEDGENGYLVP 328 (372)
T ss_pred HHcCCcceEEEcCC---CCCHHHHHhhhhEEEe---cccccccChHHHHHHhCCCCEEEecCCCCcHHHcccCCCceEeC
Confidence 99988 68999986 7889999999999999 688899999999999999999999976 7899999999999997
Q ss_pred --CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHH
Q 011969 415 --SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEE 459 (474)
Q Consensus 415 --~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~ 459 (474)
|+++++++|..++++ ++.++++++++++.+.+++|+..|++
T Consensus 329 ~~d~~~la~~i~~ll~~----~~~~~~~~~~a~~~~~~~s~~~~~~~ 371 (372)
T cd04949 329 KGDIEALAEAIIELLND----PKLLQKFSEAAYENAERYSEENVWEK 371 (372)
T ss_pred CCcHHHHHHHHHHHHcC----HHHHHHHHHHHHHHHHHhhHHHHHhc
Confidence 899999999999995 88999999999988888888877653
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra |
| >cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.9e-24 Score=223.72 Aligned_cols=357 Identities=16% Similarity=0.111 Sum_probs=215.8
Q ss_pred CCCCceEEEEEeCCCC-CCchHHHHHHHHHhhCCCeEEEEecCCC--CCCcceeccCCeEEEEeecC-CCCCCC--CCch
Q 011969 1 MGRRGRACVVVLGDLG-RSPRMQYQALSLARQMSLEVDVVAYGGS--KPHAAILEHPSIHIHTMTQW-PTIPRG--LPKV 74 (474)
Q Consensus 1 m~~~~~~~i~~~~~~g-~~~r~~~~a~~l~~~~g~eV~Vv~~~~~--~~~~~~~~~~gi~i~~~~~~-~~~~~~--~~~~ 74 (474)
|...+.++++...+|+ ...|-|..+..|+++ ||.|..|...+. .+. ....+..++..-... ...... ....
T Consensus 1 ~~~~~~~~~~~~~~w~~~~~~~qhl~~~~a~~-~~~vl~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (373)
T cd04950 1 MADRPDILVFSADDWDFLWQRPQHLAARLAER-GNRVLYVEPPGLSRTPQ--PRGRDWVRVVLRLRAALRRPRRLDPLIP 77 (373)
T ss_pred CCCCCeEEEecccCcCCCCCCHHHHHHHHHhC-CCeEEEEeCCCccCCCC--CCCcccEEeeecccccccCccccCcccc
Confidence 4455555555556676 467999999999976 999999987653 222 122333333221100 000000 0000
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhcCCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCchHHH
Q 011969 75 LKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVS 154 (474)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~ 154 (474)
..........+... +.+.......+..+++.++ |... .++..+.+.++||+++|...... +....
T Consensus 78 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~~~-P~~~-----~~~~~~~~~~~Vyd~~D~~~~~~----~~~~~--- 142 (373)
T cd04950 78 ARRRRLLRLLLNAL--LFWAQLELGFGRPILWYYT-PYTL-----PVAALLQASLVVYDCVDDLSAFP----GGPPE--- 142 (373)
T ss_pred chhhhHHHHHHHHH--HHHHHHhcCCCCcEEEEeC-ccHH-----HHHhhcCCCeEEEEcccchhccC----CCCHH---
Confidence 11111111111110 1111111113344454444 3322 22333678899999998732111 11111
Q ss_pred HHHHHHHHHhhhcCEEEEeCHHHHHHHHHHhCCceEEEeCCCC-CCCCCCChHHHHHHHHhhhhccCCCCCccccccccc
Q 011969 155 IYRWIEKYYGKMANGCLCVTQAMQHELAQNWGIKATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAG 233 (474)
Q Consensus 155 ~~~~~e~~~~~~ad~vi~vS~~~~~~l~~~~~~~~~vi~n~~~-~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 233 (474)
....|+.+.+.||.|+++|+.+++.+.+. +.++.+++||.+ +.|.+....... . ..+
T Consensus 143 -~~~~e~~~~~~ad~vi~~S~~l~~~~~~~-~~~i~~i~ngvd~~~f~~~~~~~~~-~-~~~------------------ 200 (373)
T cd04950 143 -LLEAERRLLKRADLVFTTSPSLYEAKRRL-NPNVVLVPNGVDYEHFAAARDPPPP-P-ADL------------------ 200 (373)
T ss_pred -HHHHHHHHHHhCCEEEECCHHHHHHHhhC-CCCEEEcccccCHHHhhcccccCCC-h-hHH------------------
Confidence 12778999999999999999999888764 667899999954 555443211000 0 000
Q ss_pred cCCcCcchhhhhcccccccccCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccc
Q 011969 234 MEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQY 313 (474)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (474)
...+++ .++|+|++.+.++++.+.++++.
T Consensus 201 --------------------~~~~~~-~i~y~G~l~~~~d~~ll~~la~~------------------------------ 229 (373)
T cd04950 201 --------------------AALPRP-VIGYYGAIAEWLDLELLEALAKA------------------------------ 229 (373)
T ss_pred --------------------hcCCCC-EEEEEeccccccCHHHHHHHHHH------------------------------
Confidence 112334 89999999998888766554432
Q ss_pred cCCCEEEEEEeCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcccEEEeeccCC--CCCCCchHHHHHHhcCCc
Q 011969 314 LYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSS--SGLDLPMKVVDMFGCGLP 391 (474)
Q Consensus 314 ~~~~~~l~ivG~g~~~~~~~~~~~~l~l~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s--~~e~~p~kv~Eama~G~P 391 (474)
.|+++|+|+|+|+...+. ....+.+||+|+|. ++.++++.+++.||++++|...+ ...++|+|++||||||+|
T Consensus 230 -~p~~~~vliG~~~~~~~~---~~~~~~~nV~~~G~-~~~~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~P 304 (373)
T cd04950 230 -RPDWSFVLIGPVDVSIDP---SALLRLPNVHYLGP-KPYKELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGKP 304 (373)
T ss_pred -CCCCEEEEECCCcCccCh---hHhccCCCEEEeCC-CCHHHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCCC
Confidence 488999999988333222 22223479999998 99999999999999999976544 345789999999999999
Q ss_pred EEEecccccccccccCCcEEEeC-CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHHH
Q 011969 392 VCAVSYSCIEELVKVDKNGLLFS-SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAK 462 (474)
Q Consensus 392 Via~~~~~~~e~v~~~~~G~l~~-~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~ 462 (474)
||+++.+.+ +.....+++.. |+++++++|..++... ++...++.++ ...+++|+...+++..
T Consensus 305 VVat~~~~~---~~~~~~~~~~~~d~~~~~~ai~~~l~~~--~~~~~~~~~~----~~~~~sW~~~a~~~~~ 367 (373)
T cd04950 305 VVATPLPEV---RRYEDEVVLIADDPEEFVAAIEKALLED--GPARERRRLR----LAAQNSWDARAAEMLE 367 (373)
T ss_pred EEecCcHHH---HhhcCcEEEeCCCHHHHHHHHHHHHhcC--CchHHHHHHH----HHHHCCHHHHHHHHHH
Confidence 999986544 44444455554 7999999999976641 2222222211 3447888887777653
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.7e-26 Score=225.57 Aligned_cols=333 Identities=16% Similarity=0.165 Sum_probs=228.7
Q ss_pred hHHHHHHHHHhhCCCeEEEEecC--CCCCCcceeccCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhh
Q 011969 20 RMQYQALSLARQMSLEVDVVAYG--GSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCV 97 (474)
Q Consensus 20 r~~~~a~~l~~~~g~eV~Vv~~~--~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (474)
...+.+..|.+ +||.|.+++.. ...+. ...-.|++++.+|-.. ...-..++..+.. +.++.....
T Consensus 20 hiy~lSq~li~-lghkVvvithayg~r~gi--rylt~glkVyylp~~v--~~n~tT~ptv~~~--------~Pllr~i~l 86 (426)
T KOG1111|consen 20 HIYALSQCLIR-LGHKVVVITHAYGNRVGI--RYLTNGLKVYYLPAVV--GYNQTTFPTVFSD--------FPLLRPILL 86 (426)
T ss_pred hHHHhhcchhh-cCCeEEEEeccccCccce--eeecCCceEEEEeeee--eecccchhhhhcc--------Ccccchhhh
Confidence 34455567777 59999999954 32222 2223468888888321 1111112211111 111111222
Q ss_pred hcCCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhhhcCEEEEeCHHH
Q 011969 98 KIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAM 177 (474)
Q Consensus 98 ~~~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~ 177 (474)
+ ++..++|.|++.+...- -+...++..|-+.+++=|.+ |. +..-+ ......+-+......|.+||+|..-
T Consensus 87 r-E~I~ivhghs~fS~lah-e~l~hartMGlktVfTdHSl-fG-----fad~~--si~~n~ll~~sL~~id~~IcVshts 156 (426)
T KOG1111|consen 87 R-ERIEIVHGHSPFSYLAH-EALMHARTMGLKTVFTDHSL-FG-----FADIG--SILTNKLLPLSLANIDRIICVSHTS 156 (426)
T ss_pred h-hceEEEecCChHHHHHH-HHHHHHHhcCceEEEecccc-cc-----ccchh--hhhhcceeeeeecCCCcEEEEeecC
Confidence 2 68999999986443322 24455667789999999986 21 11111 1111233334456789999999877
Q ss_pred HHHHH--HHh-CCceEEEeCC-CCCCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhcccccccc
Q 011969 178 QHELA--QNW-GIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVF 253 (474)
Q Consensus 178 ~~~l~--~~~-~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (474)
++..- ... ..++.+|||. ..+.|.|.+..
T Consensus 157 kentvlr~~L~p~kvsvIPnAv~~~~f~P~~~~----------------------------------------------- 189 (426)
T KOG1111|consen 157 KENTVLRGALAPAKVSVIPNAVVTHTFTPDAAD----------------------------------------------- 189 (426)
T ss_pred CCceEEEeccCHhHeeeccceeeccccccCccc-----------------------------------------------
Confidence 75421 111 2238999998 55778775321
Q ss_pred cCCCCC-eEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCChHHH
Q 011969 254 LKPNRP-ALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESY 332 (474)
Q Consensus 254 ~~~~~~-~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~~ 332 (474)
+++++ ..++.++|+.++||+|.|++++..+.+ ++|+++|+|+|+||....+
T Consensus 190 -~~S~~i~~ivv~sRLvyrKGiDll~~iIp~vc~---------------------------~~p~vrfii~GDGPk~i~l 241 (426)
T KOG1111|consen 190 -KPSADIITIVVASRLVYRKGIDLLLEIIPSVCD---------------------------KHPEVRFIIIGDGPKRIDL 241 (426)
T ss_pred -cCCCCeeEEEEEeeeeeccchHHHHHHHHHHHh---------------------------cCCCeeEEEecCCcccchH
Confidence 12222 588999999999999999999999998 4899999999999999999
Q ss_pred HHHHHHcCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecccccccccccCCcEE
Q 011969 333 EEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGL 411 (474)
Q Consensus 333 ~~~~~~l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~~~~e~v~~~~~G~ 411 (474)
++..+++.+ ++|.++|. ++++++.+.|.+-|+|+. +|-.|.|+++++||++||+|||++..||++|++-++ .-+
T Consensus 242 ee~lEk~~l~~rV~~lG~-v~h~~Vr~vl~~G~IFln---tSlTEafc~~ivEAaScGL~VVsTrVGGIpeVLP~d-~i~ 316 (426)
T KOG1111|consen 242 EEMLEKLFLQDRVVMLGT-VPHDRVRDVLVRGDIFLN---TSLTEAFCMVIVEAASCGLPVVSTRVGGIPEVLPED-MIT 316 (426)
T ss_pred HHHHHHhhccCceEEecc-cchHHHHHHHhcCcEEec---cHHHHHHHHHHHHHHhCCCEEEEeecCCccccCCcc-cee
Confidence 999999999 89999999 999999999999999999 799999999999999999999999999999998655 222
Q ss_pred EeC-CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHH
Q 011969 412 LFS-SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHA 461 (474)
Q Consensus 412 l~~-~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ 461 (474)
+.. +++++++++++.+......|+ .+-++..+ .|+|..-.++.-
T Consensus 317 ~~~~~~~dl~~~v~~ai~~~~~~p~---~~h~~v~~---~y~w~dVa~rTe 361 (426)
T KOG1111|consen 317 LGEPGPDDLVGAVEKAITKLRTLPL---EFHDRVKK---MYSWKDVAERTE 361 (426)
T ss_pred ccCCChHHHHHHHHHHHHHhccCch---hHHHHHHH---hccHHHHHHHHH
Confidence 333 688999998888775332322 22333333 678877665543
|
|
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.2e-24 Score=220.34 Aligned_cols=230 Identities=10% Similarity=0.093 Sum_probs=175.1
Q ss_pred CCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHH-hhhcCEEEEeCHHHHHHHHHHh-C--CceEEEeCCCC-CCC
Q 011969 126 RRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYY-GKMANGCLCVTQAMQHELAQNW-G--IKATVLYDQPP-EFF 200 (474)
Q Consensus 126 ~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~-~~~ad~vi~vS~~~~~~l~~~~-~--~~~~vi~n~~~-~~f 200 (474)
.|.|+++++|+.. ++...++.++ .+.+|.++++|+.+++.+.+.. + .++.++|||.+ +.|
T Consensus 68 ~~~~~v~e~~~~~---------------~l~~~~~~~~~~~~ad~ii~~S~~~~~~l~~~g~~~~~~i~vIpNGVd~~~f 132 (331)
T PHA01630 68 VGKNIVFEVADTD---------------AISHTALYFFRNQPVDEIVVPSQWSKNAFYTSGLKIPQPIYVIPHNLNPRMF 132 (331)
T ss_pred cCCceEEEEEeec---------------hhhHHHHHHHhhccCCEEEECCHHHHHHHHHcCCCCCCCEEEECCCCCHHHc
Confidence 4779999999841 2223556666 6889999999999999987752 2 25889999954 455
Q ss_pred CCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhcccccccccCCCCCeEEEEEeecccCCCHHHHHHH
Q 011969 201 HPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEA 280 (474)
Q Consensus 201 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~l~~~k~~~~Li~a 280 (474)
.+... ..+.+.+++++|++.+.||++.|++|
T Consensus 133 ~~~~~-------------------------------------------------~~~~~~vl~~~g~~~~~Kg~d~Li~A 163 (331)
T PHA01630 133 EYKPK-------------------------------------------------EKPHPCVLAILPHSWDRKGGDIVVKI 163 (331)
T ss_pred CCCcc-------------------------------------------------ccCCCEEEEEeccccccCCHHHHHHH
Confidence 43310 01234477788899999999999999
Q ss_pred HHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHH
Q 011969 281 ALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLL 360 (474)
Q Consensus 281 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~~~l~l~~V~f~g~~v~~~~~~~~l 360 (474)
++.+.++ .++++++|+|+++....+ .++.. +.+. ++.+++..+|
T Consensus 164 ~~~l~~~---------------------------~~~~~llivG~~~~~~~l------~~~~~--~~~~-v~~~~l~~~y 207 (331)
T PHA01630 164 FHELQNE---------------------------GYDFYFLIKSSNMLDPRL------FGLNG--VKTP-LPDDDIYSLF 207 (331)
T ss_pred HHHHHhh---------------------------CCCEEEEEEeCcccchhh------ccccc--eecc-CCHHHHHHHH
Confidence 9998763 578999999976543321 12222 3455 8899999999
Q ss_pred hcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecccccccccccCCcEEEe--------------------C-CHHHH
Q 011969 361 GSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF--------------------S-SSSEL 419 (474)
Q Consensus 361 ~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~~~~e~v~~~~~G~l~--------------------~-~~~~l 419 (474)
+.||++++ ||..|+||++++||||||+|||+|+.+++.|++.++.+|+++ + |.+++
T Consensus 208 ~~aDv~v~---pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G~~v~~~~~~~ 284 (331)
T PHA01630 208 AGCDILFY---PVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVGYFLDPDIEDA 284 (331)
T ss_pred HhCCEEEE---CCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccccccCCcccccccCCCHHHH
Confidence 99999999 688899999999999999999999999999999998887765 3 67889
Q ss_pred HHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHH
Q 011969 420 ADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEE 459 (474)
Q Consensus 420 a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~ 459 (474)
++++.+++.+.. +++.++.+++++....++++|+..-++
T Consensus 285 ~~~ii~~l~~~~-~~~~~~~~~~~~~~~~~~fs~~~ia~k 323 (331)
T PHA01630 285 YQKLLEALANWT-PEKKKENLEGRAILYRENYSYNAIAKM 323 (331)
T ss_pred HHHHHHHHhCCC-HHHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 999988888521 245566677777777778988876554
|
|
| >cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.5e-23 Score=213.22 Aligned_cols=324 Identities=19% Similarity=0.164 Sum_probs=210.1
Q ss_pred EEeCCCCCCch-HHHHHHHHHhhCCCeEEEEecCCCCCCcceeccCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHH
Q 011969 10 VVLGDLGRSPR-MQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQF 88 (474)
Q Consensus 10 ~~~~~~g~~~r-~~~~a~~l~~~~g~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (474)
+..|+.||..+ ....+..|.++ ||+|+++|....... ......|++++.++.... .... ....+......+..+
T Consensus 4 ~~~~~~gG~~~~~~~la~~l~~~-G~ev~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~ 78 (350)
T cd03785 4 IAGGGTGGHIFPALALAEELRER-GAEVLFLGTKRGLEA-RLVPKAGIPLHTIPVGGL--RRKG-SLKKLKAPFKLLKGV 78 (350)
T ss_pred EEecCchhhhhHHHHHHHHHHhC-CCEEEEEECCCcchh-hcccccCCceEEEEecCc--CCCC-hHHHHHHHHHHHHHH
Confidence 33444565554 44677888886 999999997643221 233345788888883211 1111 111111111111111
Q ss_pred HHHHHHHhhhcCCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhhhcC
Q 011969 89 FMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMAN 168 (474)
Q Consensus 89 ~~~~~~~~~~~~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad 168 (474)
.. +...+ +..+||+||++++.. .. .+.++++..++|++++.|+... . ..++.+.+.+|
T Consensus 79 ~~-~~~~i-~~~~pDvI~~~~~~~--~~-~~~~~a~~~~~p~v~~~~~~~~----------~-------~~~~~~~~~~~ 136 (350)
T cd03785 79 LQ-ARKIL-KKFKPDVVVGFGGYV--SG-PVGLAAKLLGIPLVIHEQNAVP----------G-------LANRLLARFAD 136 (350)
T ss_pred HH-HHHHH-HhcCCCEEEECCCCc--ch-HHHHHHHHhCCCEEEEcCCCCc----------c-------HHHHHHHHhhC
Confidence 11 11222 337899999987532 22 3456677888999886665410 0 23456667799
Q ss_pred EEEEeCHHHHHHHHHHhCCceEEEeCCCC-CCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhcc
Q 011969 169 GCLCVTQAMQHELAQNWGIKATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSL 247 (474)
Q Consensus 169 ~vi~vS~~~~~~l~~~~~~~~~vi~n~~~-~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (474)
.++++|+.++++ ..+.++.+++|+.. +.+.+.. . +++++
T Consensus 137 ~vi~~s~~~~~~---~~~~~~~~i~n~v~~~~~~~~~--~----~~~~~------------------------------- 176 (350)
T cd03785 137 RVALSFPETAKY---FPKDKAVVTGNPVREEILALDR--E----RARLG------------------------------- 176 (350)
T ss_pred EEEEcchhhhhc---CCCCcEEEECCCCchHHhhhhh--h----HHhcC-------------------------------
Confidence 999999988866 22455888999854 3333221 0 22332
Q ss_pred cccccccCCCCCeEEEEEeecccCCCHHH-HHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEE-EEEEeC
Q 011969 248 AGIDVFLKPNRPALVVSSTSWTPDEDFGI-LLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLL-FIITGK 325 (474)
Q Consensus 248 ~~~~~~~~~~~~~~i~~~G~l~~~k~~~~-Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~ivG~ 325 (474)
++++.+ +++++|+....++... +++++..+.+ +++. ++++|+
T Consensus 177 ------~~~~~~-~i~~~~g~~~~~~~~~~l~~a~~~l~~-----------------------------~~~~~~~i~G~ 220 (350)
T cd03785 177 ------LRPGKP-TLLVFGGSQGARAINEAVPEALAELLR-----------------------------KRLQVIHQTGK 220 (350)
T ss_pred ------CCCCCe-EEEEECCcHhHHHHHHHHHHHHHHhhc-----------------------------cCeEEEEEcCC
Confidence 223444 5555555555566654 4577777643 3455 467888
Q ss_pred CCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecccc------
Q 011969 326 GPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC------ 399 (474)
Q Consensus 326 g~~~~~~~~~~~~l~l~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~~------ 399 (474)
| +.+++++.++++ .++|.|.|. .+++..+|+.||++|+ ++ + +++++|||++|+|||+++.++
T Consensus 221 g-~~~~l~~~~~~~-~~~v~~~g~---~~~~~~~l~~ad~~v~---~s-g---~~t~~Eam~~G~Pvv~~~~~~~~~~~~ 288 (350)
T cd03785 221 G-DLEEVKKAYEEL-GVNYEVFPF---IDDMAAAYAAADLVIS---RA-G---ASTVAELAALGLPAILIPLPYAADDHQ 288 (350)
T ss_pred c-cHHHHHHHHhcc-CCCeEEeeh---hhhHHHHHHhcCEEEE---CC-C---HhHHHHHHHhCCCEEEeecCCCCCCcH
Confidence 8 667788888776 468999998 4899999999999997 33 2 579999999999999987543
Q ss_pred --cccccccCCcEEEeC----CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccc
Q 011969 400 --IEELVKVDKNGLLFS----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSAR 452 (474)
Q Consensus 400 --~~e~v~~~~~G~l~~----~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (474)
..+.+.++++|++++ |+++++++|..+++ +++.+++|+++++++...+.
T Consensus 289 ~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll~----~~~~~~~~~~~~~~~~~~~~ 343 (350)
T cd03785 289 TANARALVKAGAAVLIPQEELTPERLAAALLELLS----DPERLKAMAEAARSLARPDA 343 (350)
T ss_pred HHhHHHHHhCCCEEEEecCCCCHHHHHHHHHHHhc----CHHHHHHHHHHHHhcCCCCH
Confidence 246677788999986 69999999999997 48899999999998765443
|
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.4e-23 Score=211.29 Aligned_cols=327 Identities=17% Similarity=0.146 Sum_probs=213.0
Q ss_pred eEEEEEeCCCCCCch-HHHHHHHHHhhCCCeEEEEecCCCCCCcceeccCCeEEEEeecCCCCCCCCCchhHHHHHHHHH
Q 011969 6 RACVVVLGDLGRSPR-MQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKP 84 (474)
Q Consensus 6 ~~~i~~~~~~g~~~r-~~~~a~~l~~~~g~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (474)
++++++.| .|+..+ +...+..|.++ ||+|++++...... ....+..|+++++++... ....+ ....+......
T Consensus 3 ~i~i~~~g-~gG~~~~~~~la~~L~~~-g~ev~vv~~~~~~~-~~~~~~~g~~~~~~~~~~--~~~~~-~~~~l~~~~~~ 76 (357)
T PRK00726 3 KILLAGGG-TGGHVFPALALAEELKKR-GWEVLYLGTARGME-ARLVPKAGIEFHFIPSGG--LRRKG-SLANLKAPFKL 76 (357)
T ss_pred EEEEEcCc-chHhhhHHHHHHHHHHhC-CCEEEEEECCCchh-hhccccCCCcEEEEeccC--cCCCC-hHHHHHHHHHH
Confidence 46655555 465555 34667777775 99999999765321 233334689999988321 11111 11112222222
Q ss_pred HHHHHHHHHHHhhhcCCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHh
Q 011969 85 LIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYG 164 (474)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 164 (474)
+..+. .++.++ +..+||+||++++.. . +.+.++++..++|++++.|+... . ..+++++
T Consensus 77 ~~~~~-~~~~~i-k~~~pDvv~~~~~~~--~-~~~~~~~~~~~~p~v~~~~~~~~----------~-------~~~r~~~ 134 (357)
T PRK00726 77 LKGVL-QARKIL-KRFKPDVVVGFGGYV--S-GPGGLAARLLGIPLVIHEQNAVP----------G-------LANKLLA 134 (357)
T ss_pred HHHHH-HHHHHH-HhcCCCEEEECCCcc--h-hHHHHHHHHcCCCEEEEcCCCCc----------c-------HHHHHHH
Confidence 21111 222333 337899999998422 2 23556677888999987776411 0 3356667
Q ss_pred hhcCEEEEeCHHHHHHHHHHhCCceEEEeCCCC-CCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhh
Q 011969 165 KMANGCLCVTQAMQHELAQNWGIKATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETI 243 (474)
Q Consensus 165 ~~ad~vi~vS~~~~~~l~~~~~~~~~vi~n~~~-~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (474)
+.+|.+++.++.... +..+.++.+++|+.. +.+.+.. . ..+++
T Consensus 135 ~~~d~ii~~~~~~~~---~~~~~~i~vi~n~v~~~~~~~~~--~----~~~~~--------------------------- 178 (357)
T PRK00726 135 RFAKKVATAFPGAFP---EFFKPKAVVTGNPVREEILALAA--P----PARLA--------------------------- 178 (357)
T ss_pred HHhchheECchhhhh---ccCCCCEEEECCCCChHhhcccc--h----hhhcc---------------------------
Confidence 789999999885532 223456899999854 3332211 0 01111
Q ss_pred hhcccccccccCCCCCeEEEEEeecccCCCHHHHH-HHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEE
Q 011969 244 FTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILL-EAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFII 322 (474)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~i~~~G~l~~~k~~~~Li-~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i 322 (474)
++++.+ +++++|+....+++..++ +|++.+.+ .+ ..+++
T Consensus 179 ----------~~~~~~-~i~~~gg~~~~~~~~~~l~~a~~~~~~----------------------------~~-~~~~~ 218 (357)
T PRK00726 179 ----------GREGKP-TLLVVGGSQGARVLNEAVPEALALLPE----------------------------AL-QVIHQ 218 (357)
T ss_pred ----------CCCCCe-EEEEECCcHhHHHHHHHHHHHHHHhhh----------------------------Cc-EEEEE
Confidence 223333 677788777777766555 88877754 23 56788
Q ss_pred EeCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecccc---
Q 011969 323 TGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC--- 399 (474)
Q Consensus 323 vG~g~~~~~~~~~~~~l~l~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~~--- 399 (474)
+|+|+. +.+.+..+ ++++ |.|.|. .+++..+|..||++++ ++ + +++++|||+||+|||++..++
T Consensus 219 ~G~g~~-~~~~~~~~-~~~~-v~~~g~---~~~~~~~~~~~d~~i~---~~-g---~~~~~Ea~~~g~Pvv~~~~~~~~~ 285 (357)
T PRK00726 219 TGKGDL-EEVRAAYA-AGIN-AEVVPF---IDDMAAAYAAADLVIC---RA-G---ASTVAELAAAGLPAILVPLPHAAD 285 (357)
T ss_pred cCCCcH-HHHHHHhh-cCCc-EEEeeh---HhhHHHHHHhCCEEEE---CC-C---HHHHHHHHHhCCCEEEecCCCCCc
Confidence 999875 44555555 7765 999998 4899999999999998 33 2 579999999999999987532
Q ss_pred -----cccccccCCcEEEeC--C--HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccch
Q 011969 400 -----IEELVKVDKNGLLFS--S--SSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARW 453 (474)
Q Consensus 400 -----~~e~v~~~~~G~l~~--~--~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w 453 (474)
..+.+.+.++|++++ | +++|+++|..++++ ++.+++|++++++++....-
T Consensus 286 ~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ll~~----~~~~~~~~~~~~~~~~~~~~ 344 (357)
T PRK00726 286 DHQTANARALVDAGAALLIPQSDLTPEKLAEKLLELLSD----PERLEAMAEAARALGKPDAA 344 (357)
T ss_pred CcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHHHHcC----HHHHHHHHHHHHhcCCcCHH
Confidence 235677888999985 4 89999999999995 88999999999987644443
|
|
| >PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.6e-23 Score=215.98 Aligned_cols=265 Identities=17% Similarity=0.192 Sum_probs=185.9
Q ss_pred CCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhhhcCEEEEeCHHHHH
Q 011969 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179 (474)
Q Consensus 100 ~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~ 179 (474)
.+||++|++.....+.+ ...++..++|+++..|.... ......+.+.++.+.+++.+|.++++|+.+++
T Consensus 123 ~~Pd~v~~~~~~~~~~~---l~~~~~~~ip~vl~~~~~~~--------~s~~~~~~~~~~~r~~~~~~d~ii~~S~~~~~ 191 (425)
T PRK05749 123 WRPKLVIIMETELWPNL---IAELKRRGIPLVLANARLSE--------RSFKRYQKFKRFYRLLFKNIDLVLAQSEEDAE 191 (425)
T ss_pred hCCCEEEEEecchhHHH---HHHHHHCCCCEEEEeccCCh--------hhHHHHHHHHHHHHHHHHhCCEEEECCHHHHH
Confidence 78999998865444433 22345678998886554411 00001123456777788899999999999999
Q ss_pred HHHHHhCCc--eEEEeCCCCCCCCCCC-hHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhcccccccccCC
Q 011969 180 ELAQNWGIK--ATVLYDQPPEFFHPTS-LEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKP 256 (474)
Q Consensus 180 ~l~~~~~~~--~~vi~n~~~~~f~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (474)
.+.+. |.+ +.+++|...+.+.+.. ......++.+++ +
T Consensus 192 ~l~~~-g~~~~i~vi~n~~~d~~~~~~~~~~~~~~r~~~~---------------------------------------~ 231 (425)
T PRK05749 192 RFLAL-GAKNEVTVTGNLKFDIEVPPELAARAATLRRQLA---------------------------------------P 231 (425)
T ss_pred HHHHc-CCCCCcEecccccccCCCChhhHHHHHHHHHHhc---------------------------------------C
Confidence 98874 543 5677775333332221 112233333332 2
Q ss_pred CCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCCh-HHHHHH
Q 011969 257 NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK-ESYEEK 335 (474)
Q Consensus 257 ~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~-~~~~~~ 335 (474)
+++ +++++|+. .++.+.+++|++.+.++ .|+++|+|+|+|+++ +++++.
T Consensus 232 ~~~-vil~~~~~--~~~~~~ll~A~~~l~~~---------------------------~~~~~liivG~g~~r~~~l~~~ 281 (425)
T PRK05749 232 NRP-VWIAASTH--EGEEELVLDAHRALLKQ---------------------------FPNLLLILVPRHPERFKEVEEL 281 (425)
T ss_pred CCc-EEEEeCCC--chHHHHHHHHHHHHHHh---------------------------CCCcEEEEcCCChhhHHHHHHH
Confidence 344 66777764 57899999999998763 689999999999986 789999
Q ss_pred HHHcCCCcEEEecCCCC-----------cccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecc-cccccc
Q 011969 336 IRRLRLKRVAFRTMWLS-----------AEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY-SCIEEL 403 (474)
Q Consensus 336 ~~~l~l~~V~f~g~~v~-----------~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~-~~~~e~ 403 (474)
++++|+..+.|.+...+ .+++..+|+.||+++++ +|..+++|..++||||||+|||+++. ++..++
T Consensus 282 ~~~~gl~~~~~~~~~~~~~~~~v~l~~~~~el~~~y~~aDi~~v~--~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~ 359 (425)
T PRK05749 282 LKKAGLSYVRRSQGEPPSADTDVLLGDTMGELGLLYAIADIAFVG--GSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEI 359 (425)
T ss_pred HHhCCCcEEEccCCCCCCCCCcEEEEecHHHHHHHHHhCCEEEEC--CCcCCCCCCCHHHHHHhCCCEEECCCccCHHHH
Confidence 99999876666654222 35899999999997774 56667799999999999999999763 455555
Q ss_pred cccC-CcEEE--eCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhcccc
Q 011969 404 VKVD-KNGLL--FSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSA 451 (474)
Q Consensus 404 v~~~-~~G~l--~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (474)
++.. .+|++ ..|+++|+++|..+++ |++.+++|++++++...+.
T Consensus 360 ~~~~~~~g~~~~~~d~~~La~~l~~ll~----~~~~~~~m~~~a~~~~~~~ 406 (425)
T PRK05749 360 FERLLQAGAAIQVEDAEDLAKAVTYLLT----DPDARQAYGEAGVAFLKQN 406 (425)
T ss_pred HHHHHHCCCeEEECCHHHHHHHHHHHhc----CHHHHHHHHHHHHHHHHhC
Confidence 4331 23444 4589999999999998 4899999999999876443
|
|
| >TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.3e-23 Score=207.59 Aligned_cols=324 Identities=16% Similarity=0.151 Sum_probs=203.6
Q ss_pred eEEEEEeCCCCCCchHHHHHHHHHhhCCCeEEEEecCCCCCCcceeccCCeEEEEeecCCCCCCCCCchhHHHHHHHHHH
Q 011969 6 RACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPL 85 (474)
Q Consensus 6 ~~~i~~~~~~g~~~r~~~~a~~l~~~~g~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (474)
+++|+..|.-|+..+-...+..|.++ ||+|++++...... ....+..|+++++++... ..... ....+......+
T Consensus 2 ~i~~~~g~~~g~~~~~~~La~~L~~~-g~eV~vv~~~~~~~-~~~~~~~g~~~~~i~~~~--~~~~~-~~~~l~~~~~~~ 76 (348)
T TIGR01133 2 KVVLAAGGTGGHIFPALAVAEELIKR-GVEVLWLGTKRGLE-KRLVPKAGIEFYFIPVGG--LRRKG-SFRLIKTPLKLL 76 (348)
T ss_pred eEEEEeCccHHHHhHHHHHHHHHHhC-CCEEEEEeCCCcch-hcccccCCCceEEEeccC--cCCCC-hHHHHHHHHHHH
Confidence 35655555433333334678888886 99999998643221 123344689999888321 11111 111111111111
Q ss_pred HHHHHHHHHHhhhcCCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhh
Q 011969 86 IQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGK 165 (474)
Q Consensus 86 ~~~~~~~~~~~~~~~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 165 (474)
..+. .+...+ +..+||+||++++. +.. .+.++++..+.|+++..++.. . ...++++.+
T Consensus 77 ~~~~-~l~~~i-~~~~pDvVi~~~~~--~~~-~~~~~~~~~~~p~v~~~~~~~---------~--------~~~~~~~~~ 134 (348)
T TIGR01133 77 KAVF-QARRIL-KKFKPDAVIGFGGY--VSG-PAGLAAKLLGIPLFHHEQNAV---------P--------GLTNKLLSR 134 (348)
T ss_pred HHHH-HHHHHH-HhcCCCEEEEcCCc--ccH-HHHHHHHHcCCCEEEECCCCC---------c--------cHHHHHHHH
Confidence 1111 111222 33789999998742 222 345566777889886544331 0 123566778
Q ss_pred hcCEEEEeCHHHHHHHHHHhCCceEEEeCCCC-CCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhh
Q 011969 166 MANGCLCVTQAMQHELAQNWGIKATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIF 244 (474)
Q Consensus 166 ~ad~vi~vS~~~~~~l~~~~~~~~~vi~n~~~-~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (474)
.+|.++++|+.+++++ +..+++|+.. ..+.+.. . +.+++
T Consensus 135 ~~d~ii~~~~~~~~~~------~~~~i~n~v~~~~~~~~~--~----~~~~~---------------------------- 174 (348)
T TIGR01133 135 FAKKVLISFPGAKDHF------EAVLVGNPVRQEIRSLPV--P----RERFG---------------------------- 174 (348)
T ss_pred HhCeeEECchhHhhcC------CceEEcCCcCHHHhcccc--h----hhhcC----------------------------
Confidence 8999999999888665 2368888754 2222211 1 11122
Q ss_pred hcccccccccCCCCCeEEEEEeecccCCCHHH-HHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEE-EE
Q 011969 245 TSLAGIDVFLKPNRPALVVSSTSWTPDEDFGI-LLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLF-II 322 (474)
Q Consensus 245 ~~~~~~~~~~~~~~~~~i~~~G~l~~~k~~~~-Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~i 322 (474)
++++.+ +++++|+....|++.. +++|+..+.+ ++.++ ++
T Consensus 175 ---------~~~~~~-~i~~~gg~~~~~~~~~~l~~a~~~l~~-----------------------------~~~~~~~~ 215 (348)
T TIGR01133 175 ---------LREGKP-TILVLGGSQGAKILNELVPKALAKLAE-----------------------------KGIQIVHQ 215 (348)
T ss_pred ---------CCCCCe-EEEEECCchhHHHHHHHHHHHHHHHhh-----------------------------cCcEEEEE
Confidence 223333 7788887666777654 4577777654 23444 44
Q ss_pred EeCCCChHHHHHHHHHcCCC-cEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecccc--
Q 011969 323 TGKGPDKESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC-- 399 (474)
Q Consensus 323 vG~g~~~~~~~~~~~~l~l~-~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~~-- 399 (474)
+|++ +.+++++.++++++. .+.|. . +++..+|+.||++|. ++ | |++++|||++|+|+|+++.++
T Consensus 216 ~g~~-~~~~l~~~~~~~~l~~~v~~~-~----~~~~~~l~~ad~~v~---~~-g---~~~l~Ea~~~g~Pvv~~~~~~~~ 282 (348)
T TIGR01133 216 TGKN-DLEKVKNVYQELGIEAIVTFI-D----ENMAAAYAAADLVIS---RA-G---ASTVAELAAAGVPAILIPYPYAA 282 (348)
T ss_pred CCcc-hHHHHHHHHhhCCceEEecCc-c----cCHHHHHHhCCEEEE---CC-C---hhHHHHHHHcCCCEEEeeCCCCc
Confidence 5544 457788888888874 34443 2 389999999999997 33 2 679999999999999997643
Q ss_pred -----cccccccCCcEEEeC--C--HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccc
Q 011969 400 -----IEELVKVDKNGLLFS--S--SSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSAR 452 (474)
Q Consensus 400 -----~~e~v~~~~~G~l~~--~--~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (474)
..+++.++++|++++ | +++++++|..+++ |++.+++|+++++++.....
T Consensus 283 ~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~----~~~~~~~~~~~~~~~~~~~~ 340 (348)
T TIGR01133 283 DDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLL----DPANLEAMAEAARKLAKPDA 340 (348)
T ss_pred cchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHc----CHHHHHHHHHHHHhcCCccH
Confidence 235788889999985 3 9999999999998 48899999999988764443
|
RL J Bacteriol 1993 Mar;175(6):1841-3 |
| >PHA01633 putative glycosyl transferase group 1 | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.5e-22 Score=202.16 Aligned_cols=233 Identities=14% Similarity=0.190 Sum_probs=167.5
Q ss_pred CCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhhhcCEEEEeCHHHHHHHHHHhCCc-eEEEeCCC-CCCCCCCC
Q 011969 127 RSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQNWGIK-ATVLYDQP-PEFFHPTS 204 (474)
Q Consensus 127 ~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~~l~~~~~~~-~~vi~n~~-~~~f~~~~ 204 (474)
+.+++.++|+.. . . ..+.+...+ .+.+|++|+.+++.+.+. |.+ ..++++|. .+.|.|..
T Consensus 70 ~~~~~tt~~g~~-~--------~-------~~y~~~m~~-~~~vIavS~~t~~~L~~~-G~~~~i~I~~GVD~~~f~p~~ 131 (335)
T PHA01633 70 KKYFYTTCDGIP-N--------I-------EIVNKYLLQ-DVKFIPNSKFSAENLQEV-GLQVDLPVFHGINFKIVENAE 131 (335)
T ss_pred CCceEEeeCCcC-c--------h-------HHHHHHHhc-CCEEEeCCHHHHHHHHHh-CCCCceeeeCCCChhhcCccc
Confidence 467888999882 1 0 233444444 668999999999999875 543 23567774 36666543
Q ss_pred hHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhcccccccccCCCCCeEEEEEeecccCCCHHHHHHHHHHh
Q 011969 205 LEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMY 284 (474)
Q Consensus 205 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l 284 (474)
. ...+++++++. ..+ ...+++++||+.++||++.|++|++.+
T Consensus 132 ~-~~~~~r~~~~~------------------------------------~~~-~~~~i~~vGRl~~~KG~~~LI~A~~~L 173 (335)
T PHA01633 132 K-LVPQLKQKLDK------------------------------------DFP-DTIKFGIVSGLTKRKNMDLMLQVFNEL 173 (335)
T ss_pred h-hhHHHHHHhCc------------------------------------CCC-CCeEEEEEeCCccccCHHHHHHHHHHH
Confidence 1 12344444441 012 234889999999999999999999998
Q ss_pred HHHHhhhhccCCCchhhHhHhhhcCCccccCC----CEEEEEEeCCCChHHHHHHHHHcCC-CcEEEec--CCCCcccHH
Q 011969 285 DRRVAAILNEDDSTNEEVFLKEISDGKQYLYP----RLLFIITGKGPDKESYEEKIRRLRL-KRVAFRT--MWLSAEDYP 357 (474)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~ivG~g~~~~~~~~~~~~l~l-~~V~f~g--~~v~~~~~~ 357 (474)
.++ .| +++++++|.+ ..+++++ ++|.|.| ++++.+++.
T Consensus 174 ~~~---------------------------~p~~~~~i~l~ivG~~--------~~~~l~l~~~V~f~g~~G~~~~~dl~ 218 (335)
T PHA01633 174 NTK---------------------------YPDIAKKIHFFVISHK--------QFTQLEVPANVHFVAEFGHNSREYIF 218 (335)
T ss_pred HHh---------------------------CCCccccEEEEEEcHH--------HHHHcCCCCcEEEEecCCCCCHHHHH
Confidence 763 34 4688888731 3455667 6899995 236789999
Q ss_pred HHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecccccccccc------------------cCCcEEEeC--CHH
Q 011969 358 LLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVK------------------VDKNGLLFS--SSS 417 (474)
Q Consensus 358 ~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~~~~e~v~------------------~~~~G~l~~--~~~ 417 (474)
.+|+.||++|+ ||..|+||++++||||||+|||+++.+++.|++. .+++|++++ |++
T Consensus 219 ~~y~~aDifV~---PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~ 295 (335)
T PHA01633 219 AFYGAMDFTIV---PSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQKWKIHKFQIE 295 (335)
T ss_pred HHHHhCCEEEE---CCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHHHhcCcccCceeeecCCCHH
Confidence 99999999999 6888999999999999999999999999888644 134577776 799
Q ss_pred HHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHH
Q 011969 418 ELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWE 458 (474)
Q Consensus 418 ~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~ 458 (474)
+++++|..++... +++ ..+.++++.+++++|+.-.+
T Consensus 296 ~la~ai~~~~~~~--~~~---~~~~~~~~~a~~f~~~~~~~ 331 (335)
T PHA01633 296 DMANAIILAFELQ--DRE---ERSMKLKELAKKYDIRNLYT 331 (335)
T ss_pred HHHHHHHHHHhcc--Chh---hhhHHHHHHHHhcCHHHHHH
Confidence 9999999997752 222 22555666666787765443
|
|
| >PRK09814 beta-1,6-galactofuranosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.5e-21 Score=199.38 Aligned_cols=242 Identities=14% Similarity=0.148 Sum_probs=170.2
Q ss_pred CCCCEEEEeCCCChhHHHHHHHHHhh--CCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhhhcCEEEEeCHHH
Q 011969 100 ASPDVFLVQNPPSVPTLVAVKWASSL--RRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAM 177 (474)
Q Consensus 100 ~~~Dvi~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~ 177 (474)
.+-|+||++.|+.........+++++ .++|+|+++||.+. .. ...... ....++.+++.||.++|+|+.+
T Consensus 63 ~~~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~-~~---~~~~~~----~~~~~~~~~~~aD~iI~~S~~~ 134 (333)
T PRK09814 63 KPGDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEP-LR---FDSNYY----LMKEEIDMLNLADVLIVHSKKM 134 (333)
T ss_pred CCCCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHH-Hh---ccccch----hhHHHHHHHHhCCEEEECCHHH
Confidence 44499999998765422122222222 26999999999843 11 111111 1466888889999999999999
Q ss_pred HHHHHHHhCC---ceEEEeCCCCCCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhccccccccc
Q 011969 178 QHELAQNWGI---KATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFL 254 (474)
Q Consensus 178 ~~~l~~~~~~---~~~vi~n~~~~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (474)
++++.+. |. ++.++++.+.... .. .. .
T Consensus 135 ~~~l~~~-g~~~~~i~~~~~~~~~~~--~~--~~---------------------------------------------~ 164 (333)
T PRK09814 135 KDRLVEE-GLTTDKIIVQGIFDYLND--IE--LV---------------------------------------------K 164 (333)
T ss_pred HHHHHHc-CCCcCceEeccccccccc--cc--cc---------------------------------------------c
Confidence 9999874 54 3444443321100 00 00 0
Q ss_pred CCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCChHHHHH
Q 011969 255 KPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEE 334 (474)
Q Consensus 255 ~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~ 334 (474)
..+....++|+|++...++ | +. . .++++|+|+|+|++.+
T Consensus 165 ~~~~~~~i~yaG~l~k~~~---l-~~-----~----------------------------~~~~~l~i~G~g~~~~---- 203 (333)
T PRK09814 165 TPSFQKKINFAGNLEKSPF---L-KN-----W----------------------------SQGIKLTVFGPNPEDL---- 203 (333)
T ss_pred cccCCceEEEecChhhchH---H-Hh-----c----------------------------CCCCeEEEECCCcccc----
Confidence 0112238999999984321 1 10 1 3678999999998654
Q ss_pred HHHHcCCCcEEEecCCCCcccHHHHHhcccEEEeeccC----CC----CCCCchHHHHHHhcCCcEEEeccccccccccc
Q 011969 335 KIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTS----SS----GLDLPMKVVDMFGCGLPVCAVSYSCIEELVKV 406 (474)
Q Consensus 335 ~~~~l~l~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~----s~----~e~~p~kv~Eama~G~PVia~~~~~~~e~v~~ 406 (474)
...++|.|.|. ++.++++.+|+. |+++++... +. ...+|.|+.||||||+|||+++.+++.++|++
T Consensus 204 ----~~~~~V~f~G~-~~~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~~~~~~~~V~~ 277 (333)
T PRK09814 204 ----ENSANISYKGW-FDPEELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWSKAAIADFIVE 277 (333)
T ss_pred ----ccCCCeEEecC-CCHHHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECCCccHHHHHHh
Confidence 12369999998 999999999998 877775433 11 25689999999999999999999999999999
Q ss_pred CCcEEEeCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccc
Q 011969 407 DKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSAR 452 (474)
Q Consensus 407 ~~~G~l~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (474)
+++|+++++.++++++|..+. ++++++|++++++.+...+
T Consensus 278 ~~~G~~v~~~~el~~~l~~~~------~~~~~~m~~n~~~~~~~~~ 317 (333)
T PRK09814 278 NGLGFVVDSLEELPEIIDNIT------EEEYQEMVENVKKISKLLR 317 (333)
T ss_pred CCceEEeCCHHHHHHHHHhcC------HHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999852 5678999999999775444
|
|
| >cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.8e-20 Score=200.02 Aligned_cols=322 Identities=18% Similarity=0.129 Sum_probs=198.3
Q ss_pred CCCCEEEEeCCCChhHHHHHHHHH-hhCCCcEEEEecCchhhhhhhccCCCchHH-----------------HHHHHHHH
Q 011969 100 ASPDVFLVQNPPSVPTLVAVKWAS-SLRRSAFIVDWHNFGYTLLSLSLGRRSHFV-----------------SIYRWIEK 161 (474)
Q Consensus 100 ~~~Dvi~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~-----------------~~~~~~e~ 161 (474)
.++|++|+|. +.+...+..++ +..++|+|+|.|....--. +.-+. ..+. .-...+|+
T Consensus 147 ~~~dViH~He---Wm~g~a~~~lK~~~~~VptVfTtHAT~~GR~-l~~g~-~~~y~~l~~~~~d~eA~~~~I~~r~~iE~ 221 (590)
T cd03793 147 EPAVVAHFHE---WQAGVGLPLLRKRKVDVSTIFTTHATLLGRY-LCAGN-VDFYNNLDYFDVDKEAGKRGIYHRYCIER 221 (590)
T ss_pred CCCeEEEEcc---hhHhHHHHHHHHhCCCCCEEEEecccccccc-cccCC-cccchhhhhcchhhhhhcccchHHHHHHH
Confidence 5799999999 55555555666 4567899999996531100 00000 0000 11235899
Q ss_pred HHhhhcCEEEEeCHHHHHHHHHHhCCc-eEEEeCCC-CCCCCCCChH-HH-HHHHHhhhhccCCCCCccccccccccCCc
Q 011969 162 YYGKMANGCLCVTQAMQHELAQNWGIK-ATVLYDQP-PEFFHPTSLE-EK-HELFCRLNKILHQPLGVQDCVSNAGMEGQ 237 (474)
Q Consensus 162 ~~~~~ad~vi~vS~~~~~~l~~~~~~~-~~vi~n~~-~~~f~~~~~~-~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 237 (474)
.+...||.+++||+.++.++...++.+ -.|+|||. ++.|.+.... .. ..-++++.. ++
T Consensus 222 ~aa~~Ad~fttVS~it~~E~~~Ll~~~pd~ViPNGid~~~f~~~~e~~~~~~~~k~ki~~----------f~-------- 283 (590)
T cd03793 222 AAAHCAHVFTTVSEITAYEAEHLLKRKPDVVLPNGLNVKKFSALHEFQNLHAQSKEKINE----------FV-------- 283 (590)
T ss_pred HHHhhCCEEEECChHHHHHHHHHhCCCCCEEeCCCcchhhcccchhhhhhhHHhhhhhhH----------HH--------
Confidence 999999999999999999999988877 35999994 4666554321 11 111111110 00
Q ss_pred CcchhhhhcccccccccCCCCCeEEEE-Eeeccc-CCCHHHHHHHHHHhHHHHhhhhccCCC-------------ch---
Q 011969 238 KADETIFTSLAGIDVFLKPNRPALVVS-STSWTP-DEDFGILLEAALMYDRRVAAILNEDDS-------------TN--- 299 (474)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~i~~-~G~l~~-~k~~~~Li~a~~~l~~~~~~~~~~~~~-------------~~--- 299 (474)
...|. +.+.+.++.+ +++| +||+.. +||++.+|+|+..+..++ +...| ||
T Consensus 284 ---~~~~~----~~~~~~~d~t-li~f~~GR~e~~nKGiDvlIeAl~rLn~~l----~~~~~~~tVvafii~p~~~~~~~ 351 (590)
T cd03793 284 ---RGHFY----GHYDFDLDKT-LYFFTAGRYEFSNKGADMFLEALARLNYLL----KVEGSDTTVVAFFIMPAKTNNFN 351 (590)
T ss_pred ---HHHHh----hhcCCCCCCe-EEEEEeeccccccCCHHHHHHHHHHHHHHH----HhcCCCCeEEEEEEecCccCCcC
Confidence 00010 1112334555 4445 899998 999999999999998752 22222 11
Q ss_pred hhH----------------hHhhhcCC---------------------------------ccccCCCEEEEEEeCCCChH
Q 011969 300 EEV----------------FLKEISDG---------------------------------KQYLYPRLLFIITGKGPDKE 330 (474)
Q Consensus 300 ~~~----------------~~~~~~~~---------------------------------~~~~~~~~~l~ivG~g~~~~ 330 (474)
.|. +-++|.+. ++...|-+.-.+.- ...+
T Consensus 352 ~~~l~g~~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~--~~~D 429 (590)
T cd03793 352 VESLKGQAVRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVD--DAND 429 (590)
T ss_pred HHhhcchHHHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCc--CccC
Confidence 111 11111111 01111211111111 2234
Q ss_pred HHHHHHHHcCC-C------cEEEecCCCCc------ccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecc
Q 011969 331 SYEEKIRRLRL-K------RVAFRTMWLSA------EDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY 397 (474)
Q Consensus 331 ~~~~~~~~l~l-~------~V~f~g~~v~~------~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~ 397 (474)
.+...++++++ + +|.|.+.+++. .++.++++.||++|+ ||..|+||++++||||||+|||+|+.
T Consensus 430 ~il~~~r~~~l~N~~~drVkvif~P~~L~~~~~~~g~~y~E~~~g~dl~v~---PS~yE~fG~~~lEAma~G~PvI~t~~ 506 (590)
T cd03793 430 PILNHIRRIQLFNSPEDRVKVVFHPEFLSSTNPLLGLDYEEFVRGCHLGVF---PSYYEPWGYTPAECTVMGIPSITTNL 506 (590)
T ss_pred HHHHHHHHhcCcCCCCCeEEEEEcccccCCCCCcCCcchHHHhhhceEEEe---ccccCCCCcHHHHHHHcCCCEEEccC
Confidence 57777888877 2 48888877764 358899999999999 79999999999999999999999999
Q ss_pred ccc----ccccccC-CcEEEeC---------CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHHHH
Q 011969 398 SCI----EELVKVD-KNGLLFS---------SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKP 463 (474)
Q Consensus 398 ~~~----~e~v~~~-~~G~l~~---------~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~ 463 (474)
+|+ .|++.++ ..|+.+. ++++++++|.++++. +...+...+..+.+.+..+.|+.-...+.+.
T Consensus 507 ~gf~~~v~E~v~~~~~~gi~V~~r~~~~~~e~v~~La~~m~~~~~~---~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A 583 (590)
T cd03793 507 SGFGCFMEEHIEDPESYGIYIVDRRFKSPDESVQQLTQYMYEFCQL---SRRQRIIQRNRTERLSDLLDWRNLGRYYRKA 583 (590)
T ss_pred cchhhhhHHHhccCCCceEEEecCCccchHHHHHHHHHHHHHHhCC---cHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 888 5655444 3455542 377888888888853 2333333333444666678887766665544
Q ss_pred H
Q 011969 464 L 464 (474)
Q Consensus 464 ~ 464 (474)
.
T Consensus 584 ~ 584 (590)
T cd03793 584 R 584 (590)
T ss_pred H
Confidence 3
|
GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity. |
| >PRK13609 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.9e-21 Score=196.60 Aligned_cols=254 Identities=11% Similarity=0.093 Sum_probs=173.8
Q ss_pred CCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhhhcCEEEEeCHHHHH
Q 011969 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179 (474)
Q Consensus 100 ~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~ 179 (474)
.+||+||++.|. ..+. ....++..++|++...++++ .. .+++++.+|.++++|+.+++
T Consensus 103 ~~pD~Vi~~~~~--~~~~-~~~~~~~~~ip~~~~~td~~-------~~------------~~~~~~~ad~i~~~s~~~~~ 160 (380)
T PRK13609 103 EKPDIVINTFPI--IAVP-ELKKQTGISIPTYNVLTDFC-------LH------------KIWVHREVDRYFVATDHVKK 160 (380)
T ss_pred hCcCEEEEcChH--HHHH-HHHHhcCCCCCeEEEeCCCC-------CC------------cccccCCCCEEEECCHHHHH
Confidence 789999997752 2222 12222334688775555542 11 11345789999999999999
Q ss_pred HHHHHhCCc---eEEEeCCCCCCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhcccccccccCC
Q 011969 180 ELAQNWGIK---ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKP 256 (474)
Q Consensus 180 ~l~~~~~~~---~~vi~n~~~~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (474)
.+.+. |.+ +.++.+.....|.+.. ....++++++ +++
T Consensus 161 ~l~~~-gi~~~ki~v~G~p~~~~f~~~~--~~~~~~~~~~-------------------------------------l~~ 200 (380)
T PRK13609 161 VLVDI-GVPPEQVVETGIPIRSSFELKI--NPDIIYNKYQ-------------------------------------LCP 200 (380)
T ss_pred HHHHc-CCChhHEEEECcccChHHcCcC--CHHHHHHHcC-------------------------------------CCC
Confidence 88874 653 5555443323343221 1223555555 345
Q ss_pred CCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeC-C-CChHHHHH
Q 011969 257 NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGK-G-PDKESYEE 334 (474)
Q Consensus 257 ~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~-g-~~~~~~~~ 334 (474)
+.++++++.|++...|++..+++++.. .++++++++|+ + +..+.+++
T Consensus 201 ~~~~il~~~G~~~~~k~~~~li~~l~~-------------------------------~~~~~~viv~G~~~~~~~~l~~ 249 (380)
T PRK13609 201 NKKILLIMAGAHGVLGNVKELCQSLMS-------------------------------VPDLQVVVVCGKNEALKQSLED 249 (380)
T ss_pred CCcEEEEEcCCCCCCcCHHHHHHHHhh-------------------------------CCCcEEEEEeCCCHHHHHHHHH
Confidence 566677888999988999988887753 36788887653 3 23466676
Q ss_pred HHHHcCCCcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEec-ccccc----cccccCCc
Q 011969 335 KIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS-YSCIE----ELVKVDKN 409 (474)
Q Consensus 335 ~~~~l~l~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~-~~~~~----e~v~~~~~ 409 (474)
.+++++ ++|.|+|. .+++..+|+.||+++. .+ .|++++|||+||+|||+++ .++.. +.+...+.
T Consensus 250 ~~~~~~-~~v~~~g~---~~~~~~l~~~aD~~v~---~~----gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~~G~ 318 (380)
T PRK13609 250 LQETNP-DALKVFGY---VENIDELFRVTSCMIT---KP----GGITLSEAAALGVPVILYKPVPGQEKENAMYFERKGA 318 (380)
T ss_pred HHhcCC-CcEEEEec---hhhHHHHHHhccEEEe---CC----CchHHHHHHHhCCCEEECCCCCCcchHHHHHHHhCCc
Confidence 666655 68999998 4679999999999885 21 3779999999999999976 44422 34444556
Q ss_pred EEEeCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHH
Q 011969 410 GLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHA 461 (474)
Q Consensus 410 G~l~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ 461 (474)
|+...|+++++++|.+++++ ++.+++|++++.+....++++...+.+.
T Consensus 319 ~~~~~~~~~l~~~i~~ll~~----~~~~~~m~~~~~~~~~~~s~~~i~~~i~ 366 (380)
T PRK13609 319 AVVIRDDEEVFAKTEALLQD----DMKLLQMKEAMKSLYLPEPADHIVDDIL 366 (380)
T ss_pred EEEECCHHHHHHHHHHHHCC----HHHHHHHHHHHHHhCCCchHHHHHHHHH
Confidence 66667999999999999984 8889999999988776666665555443
|
|
| >PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.2e-21 Score=177.72 Aligned_cols=157 Identities=24% Similarity=0.428 Sum_probs=140.7
Q ss_pred CCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCChHHHHHH
Q 011969 256 PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEK 335 (474)
Q Consensus 256 ~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~ 335 (474)
.+.+.+++|+|++.+.||++.+++++..+.++ ..+++.++|+|.++....+...
T Consensus 12 ~~~~~~il~~g~~~~~K~~~~li~a~~~l~~~--------------------------~~~~~~l~i~G~~~~~~~~~~~ 65 (172)
T PF00534_consen 12 PDKKKIILFIGRLDPEKGIDLLIEAFKKLKEK--------------------------KNPNYKLVIVGDGEYKKELKNL 65 (172)
T ss_dssp -TTSEEEEEESESSGGGTHHHHHHHHHHHHHH--------------------------HHTTEEEEEESHCCHHHHHHHH
T ss_pred CCCCeEEEEEecCccccCHHHHHHHHHHHHhh--------------------------cCCCeEEEEEcccccccccccc
Confidence 45566999999999999999999999998752 1488999999988888889999
Q ss_pred HHHcCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecccccccccccCCcEEEeC
Q 011969 336 IRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFS 414 (474)
Q Consensus 336 ~~~l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~~~~e~v~~~~~G~l~~ 414 (474)
++.+++ ++|.|.|. ++.+++..+|+.||++++ +|..+++|.+++|||+||+|||+++.++..|++.++.+|++++
T Consensus 66 ~~~~~~~~~i~~~~~-~~~~~l~~~~~~~di~v~---~s~~e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~~~~g~~~~ 141 (172)
T PF00534_consen 66 IEKLNLKENIIFLGY-VPDDELDELYKSSDIFVS---PSRNEGFGLSLLEAMACGCPVIASDIGGNNEIINDGVNGFLFD 141 (172)
T ss_dssp HHHTTCGTTEEEEES-HSHHHHHHHHHHTSEEEE----BSSBSS-HHHHHHHHTT-EEEEESSTHHHHHSGTTTSEEEES
T ss_pred ccccccccccccccc-ccccccccccccceeccc---cccccccccccccccccccceeeccccCCceeeccccceEEeC
Confidence 999999 79999998 888899999999999999 6777999999999999999999999999999999999999997
Q ss_pred --CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Q 011969 415 --SSSELADQLLMLFKGFPDDSDVLKKLRNGTLE 446 (474)
Q Consensus 415 --~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~ 446 (474)
|+++++++|..++++ ++.++.|++++++
T Consensus 142 ~~~~~~l~~~i~~~l~~----~~~~~~l~~~~~~ 171 (172)
T PF00534_consen 142 PNDIEELADAIEKLLND----PELRQKLGKNARE 171 (172)
T ss_dssp TTSHHHHHHHHHHHHHH----HHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHCC----HHHHHHHHHHhcC
Confidence 589999999999995 7899999999986
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B .... |
| >cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.6e-20 Score=196.55 Aligned_cols=278 Identities=12% Similarity=0.049 Sum_probs=182.5
Q ss_pred CCCCEEEEeCCCChhHHHHHHHHHh-hCCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhhhcCEEEEeCHHHH
Q 011969 100 ASPDVFLVQNPPSVPTLVAVKWASS-LRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178 (474)
Q Consensus 100 ~~~Dvi~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~ 178 (474)
...|+|++|++..+ ++...++. ....++++.+|-...+..- + +..+.. ..+-+.+ -.+|.+..-+....
T Consensus 130 ~~~d~iwihDyhl~---llp~~lr~~~~~~~i~~f~HipfP~~e~--~-~~lp~~---~~ll~~~-l~~D~igF~t~~~~ 199 (460)
T cd03788 130 RPGDLVWVHDYHLL---LLPQMLRERGPDARIGFFLHIPFPSSEI--F-RCLPWR---EELLRGL-LGADLIGFQTERYA 199 (460)
T ss_pred CCCCEEEEeChhhh---HHHHHHHhhCCCCeEEEEEeCCCCChHH--H-hhCCCh---HHHHHHH-hcCCEEEECCHHHH
Confidence 46899999996332 23344443 4467889999965211100 0 000110 1222222 24888888886654
Q ss_pred HHHHHH-----------------hC--CceEEEeCCC-CCCCCCCCh--HHHHHHHHhhhhccCCCCCccccccccccCC
Q 011969 179 HELAQN-----------------WG--IKATVLYDQP-PEFFHPTSL--EEKHELFCRLNKILHQPLGVQDCVSNAGMEG 236 (474)
Q Consensus 179 ~~l~~~-----------------~~--~~~~vi~n~~-~~~f~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 236 (474)
+.+.+. .| .++.++|+|. ++.|.+... ..+...++..+
T Consensus 200 ~~Fl~~~~~~l~~~~~~~~~i~~~g~~~~i~vip~GID~~~f~~~~~~~~~~~~~~~~~~-------------------- 259 (460)
T cd03788 200 RNFLSCCSRLLGLEVTDDGGVEYGGRRVRVGAFPIGIDPDAFRKLAASPEVQERAAELRE-------------------- 259 (460)
T ss_pred HHHHHHHHHHcCCcccCCceEEECCEEEEEEEEeCeEcHHHHHHHhcCchhHHHHHHHHH--------------------
Confidence 443331 12 2368889984 355544311 11111111111
Q ss_pred cCcchhhhhcccccccccCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCC
Q 011969 237 QKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYP 316 (474)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (474)
..++++ +++++||+.+.||++.+++|+..+.++ +|
T Consensus 260 -----------------~~~~~~-~il~vgRl~~~Kgi~~ll~A~~~ll~~---------------------------~p 294 (460)
T cd03788 260 -----------------RLGGRK-LIVGVDRLDYSKGIPERLLAFERLLER---------------------------YP 294 (460)
T ss_pred -----------------hcCCCE-EEEEecCccccCCHHHHHHHHHHHHHh---------------------------Ch
Confidence 113333 899999999999999999999988763 45
Q ss_pred C----EEEEEEeCC-----CChHHHHHHHH----HcC-------CCcEEEecCCCCcccHHHHHhcccEEEeeccCCCCC
Q 011969 317 R----LLFIITGKG-----PDKESYEEKIR----RLR-------LKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGL 376 (474)
Q Consensus 317 ~----~~l~ivG~g-----~~~~~~~~~~~----~l~-------l~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e 376 (474)
+ ++|+++|.+ ++.+++++.++ +++ ...|.++++.++.+++..+|+.||++|+ +|..|
T Consensus 295 ~~~~~v~Lv~vg~~~~g~~~~~~~l~~~l~~~v~~in~~~g~~~~~~v~~~~g~v~~~el~~~y~~aDv~v~---pS~~E 371 (460)
T cd03788 295 EWRGKVVLVQIAVPSRTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLPREELAALYRAADVALV---TPLRD 371 (460)
T ss_pred hhcCCEEEEEEccCCCcCcHHHHHHHHHHHHHHHHHHhccCCCCceeEEEEeCCCCHHHHHHHHHhccEEEe---Ccccc
Confidence 4 678888643 33334444443 322 2346666555899999999999999999 78899
Q ss_pred CCchHHHHHHhcCCc----EEEecccccccccccCCcEEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccc
Q 011969 377 DLPMKVVDMFGCGLP----VCAVSYSCIEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLS 450 (474)
Q Consensus 377 ~~p~kv~Eama~G~P----Via~~~~~~~e~v~~~~~G~l~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~ 450 (474)
+||++++||||||+| ||+++.+|..+. +.+|++++ |+++++++|.+++++ ++++++++++++++...+
T Consensus 372 g~~lv~lEAma~g~p~~g~vV~S~~~G~~~~---~~~g~lv~p~d~~~la~ai~~~l~~---~~~e~~~~~~~~~~~v~~ 445 (460)
T cd03788 372 GMNLVAKEYVACQDDDPGVLILSEFAGAAEE---LSGALLVNPYDIDEVADAIHRALTM---PLEERRERHRKLREYVRT 445 (460)
T ss_pred ccCcccceeEEEecCCCceEEEeccccchhh---cCCCEEECCCCHHHHHHHHHHHHcC---CHHHHHHHHHHHHHHHHh
Confidence 999999999999999 999988777765 46789986 799999999999986 567788888888887777
Q ss_pred cchHHHHHHHH
Q 011969 451 ARWATEWEEHA 461 (474)
Q Consensus 451 ~~w~~~~~~~~ 461 (474)
++|..-.++.+
T Consensus 446 ~~~~~w~~~~l 456 (460)
T cd03788 446 HDVQAWANSFL 456 (460)
T ss_pred CCHHHHHHHHH
Confidence 77765334433
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. |
| >PLN02605 monogalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.8e-19 Score=185.82 Aligned_cols=260 Identities=17% Similarity=0.188 Sum_probs=174.2
Q ss_pred CCCCEEEEeCCCCh--hHHHHHHHHH-hhCCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhhhcCEEEEeCHH
Q 011969 100 ASPDVFLVQNPPSV--PTLVAVKWAS-SLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQA 176 (474)
Q Consensus 100 ~~~Dvi~~~~~~~~--~~~~~~~~~~-~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~ 176 (474)
.+||+||++.|... +...+..+.+ ...++|++..+.|++. .. ..++.+.+|.++++|+.
T Consensus 99 ~~pDvIi~thp~~~~~~~~~l~~~~~~~~~~~p~~~~~tD~~~------~~------------~~w~~~~~d~~~~~s~~ 160 (382)
T PLN02605 99 YKPDIIVSVHPLMQHVPLRVLRWQGKELGKKIPFTTVVTDLGT------CH------------PTWFHKGVTRCFCPSEE 160 (382)
T ss_pred cCcCEEEEeCcCcccCHHHHHHHHhhccCCCCCEEEEECCCCC------cC------------cccccCCCCEEEECCHH
Confidence 78999999765321 2221122111 1236888888877720 00 12234789999999999
Q ss_pred HHHHHHHHhCCc---eEEEeCCCCCCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhcccccccc
Q 011969 177 MQHELAQNWGIK---ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVF 253 (474)
Q Consensus 177 ~~~~l~~~~~~~---~~vi~n~~~~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (474)
+++.+.+. |.+ +.++.++....|.+.. ..+..+++++|
T Consensus 161 ~~~~l~~~-g~~~~ki~v~g~~v~~~f~~~~-~~~~~~r~~~g------------------------------------- 201 (382)
T PLN02605 161 VAKRALKR-GLEPSQIRVYGLPIRPSFARAV-RPKDELRRELG------------------------------------- 201 (382)
T ss_pred HHHHHHHc-CCCHHHEEEECcccCHhhccCC-CCHHHHHHHcC-------------------------------------
Confidence 99988875 654 6666665433332221 13445667776
Q ss_pred cCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEE-EEEEeCCCChHHH
Q 011969 254 LKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLL-FIITGKGPDKESY 332 (474)
Q Consensus 254 ~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~ivG~g~~~~~~ 332 (474)
++++.+ +++++|+....|++..+++++...... . ....++.. ++++|+++. +
T Consensus 202 l~~~~~-~il~~Gg~~g~~~~~~li~~l~~~~~~----------------------~-~~~~~~~~~~vi~G~~~~---~ 254 (382)
T PLN02605 202 MDEDLP-AVLLMGGGEGMGPLEETARALGDSLYD----------------------K-NLGKPIGQVVVICGRNKK---L 254 (382)
T ss_pred CCCCCc-EEEEECCCcccccHHHHHHHHHHhhcc----------------------c-cccCCCceEEEEECCCHH---H
Confidence 334555 788899888889999999998764310 0 00024454 678887642 2
Q ss_pred HHHHHHcCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecc------cccccccc
Q 011969 333 EEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY------SCIEELVK 405 (474)
Q Consensus 333 ~~~~~~l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~------~~~~e~v~ 405 (474)
++..++... .+|.|+|. + ++++.+|+.||++|. ++ | |.+++|||+||+|||+++. ++. +.+.
T Consensus 255 ~~~L~~~~~~~~v~~~G~-~--~~~~~l~~aaDv~V~---~~-g---~~ti~EAma~g~PvI~~~~~pgqe~gn~-~~i~ 323 (382)
T PLN02605 255 QSKLESRDWKIPVKVRGF-V--TNMEEWMGACDCIIT---KA-G---PGTIAEALIRGLPIILNGYIPGQEEGNV-PYVV 323 (382)
T ss_pred HHHHHhhcccCCeEEEec-c--ccHHHHHHhCCEEEE---CC-C---cchHHHHHHcCCCEEEecCCCccchhhH-HHHH
Confidence 222333332 47999998 4 689999999999998 33 2 6799999999999999983 333 3455
Q ss_pred cCCcEEEeCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHH
Q 011969 406 VDKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEW 457 (474)
Q Consensus 406 ~~~~G~l~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~ 457 (474)
+++.|+...|+++++++|..++++ +++.+++|++++++.....+++...
T Consensus 324 ~~g~g~~~~~~~~la~~i~~ll~~---~~~~~~~m~~~~~~~~~~~a~~~i~ 372 (382)
T PLN02605 324 DNGFGAFSESPKEIARIVAEWFGD---KSDELEAMSENALKLARPEAVFDIV 372 (382)
T ss_pred hCCceeecCCHHHHHHHHHHHHcC---CHHHHHHHHHHHHHhcCCchHHHHH
Confidence 677888888999999999999984 4888999999999876555544443
|
|
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.84 E-value=8.2e-19 Score=164.29 Aligned_cols=120 Identities=33% Similarity=0.443 Sum_probs=104.9
Q ss_pred EEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCChHHHHHHHHHcCC-C
Q 011969 264 SSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRL-K 342 (474)
Q Consensus 264 ~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~~~l~l-~ 342 (474)
|+|++.+.||++.+++++..+.++ .++++++++|.+++.....+.+..++. +
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~---------------------------~~~~~~~i~G~~~~~~~~~~~~~~~~~~~ 161 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKER---------------------------GPDLKLVIAGDGPEREYLEELLAALLLLD 161 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHh---------------------------CCCeEEEEEeCCCChHHHHHHHHhcCCcc
Confidence 899999999999999999999773 689999999999888777766677776 7
Q ss_pred cEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecccccccccccCCcEEEe
Q 011969 343 RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF 413 (474)
Q Consensus 343 ~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~~~~e~v~~~~~G~l~ 413 (474)
+|.+.|...+.+++..+++.||++++ ++..|++|++++|||+||+|||+++.++..|++.++++|+++
T Consensus 162 ~v~~~~~~~~~~~~~~~~~~~di~l~---~~~~e~~~~~~~Eam~~g~pvi~s~~~~~~e~i~~~~~g~~~ 229 (229)
T cd01635 162 RVIFLGGLDPEELLALLLAAADVFVL---PSLREGFGLVVLEAMACGLPVIATDVGGPPEIVEDGLTGLLV 229 (229)
T ss_pred cEEEeCCCCcHHHHHHHhhcCCEEEe---cccccCcChHHHHHHhCCCCEEEcCCCCcceEEECCCceEEC
Confidence 99999983256667777777999999 677779999999999999999999999999999999999874
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.5e-18 Score=184.57 Aligned_cols=269 Identities=11% Similarity=0.061 Sum_probs=182.6
Q ss_pred CCCCEEEEeCCCChhHHHHHHHHHhhC-CCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhhhcCEEEEeCHHHH
Q 011969 100 ASPDVFLVQNPPSVPTLVAVKWASSLR-RSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178 (474)
Q Consensus 100 ~~~Dvi~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~ 178 (474)
..-|+|++|+. ...++...++... ..++.+.+|-...+.. ..+.-|.. +.+-+-+ -.||.|-.-+...+
T Consensus 126 ~~~d~vwvhDY---hl~l~p~~lr~~~~~~~igfFlHipfP~~e---~f~~lp~r---~~il~gl-l~~dligF~t~~~~ 195 (456)
T TIGR02400 126 QPGDIVWVHDY---HLMLLPAMLRELGVQNKIGFFLHIPFPSSE---IYRTLPWR---RELLEGL-LAYDLVGFQTYDDA 195 (456)
T ss_pred CCCCEEEEecc---hhhHHHHHHHhhCCCCeEEEEEeCCCCChH---HHhhCCcH---HHHHHHH-hcCCEEEECCHHHH
Confidence 45689999994 3333455555543 4577788886521110 00111111 1222222 37899999998877
Q ss_pred HHHHHH----hC------------C--ceEEEeCCC-CCCCCCCChH-----HHHHHHHhhhhccCCCCCcccccccccc
Q 011969 179 HELAQN----WG------------I--KATVLYDQP-PEFFHPTSLE-----EKHELFCRLNKILHQPLGVQDCVSNAGM 234 (474)
Q Consensus 179 ~~l~~~----~~------------~--~~~vi~n~~-~~~f~~~~~~-----~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 234 (474)
+.+.+. .+ . ++.++|||. ++.|.+.... ....+++++
T Consensus 196 ~~Fl~~~~~~l~~~~~~~~~~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~------------------- 256 (456)
T TIGR02400 196 RNFLSAVSRELGLETLPNGVESGGRTVRVGAFPIGIDVDRFAEQAKKPSVQKRIAELRESL------------------- 256 (456)
T ss_pred HHHHHHHHHHhCCcccCCceEECCcEEEEEEecCcCCHHHHHHHhcChhHHHHHHHHHHHc-------------------
Confidence 665432 12 1 267888884 4556443211 111222222
Q ss_pred CCcCcchhhhhcccccccccCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCcccc
Q 011969 235 EGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYL 314 (474)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (474)
.+++ +++++||+.+.||++.+++|+..+.++
T Consensus 257 ---------------------~~~~-vIl~VgRLd~~KGi~~ll~A~~~ll~~--------------------------- 287 (456)
T TIGR02400 257 ---------------------KGRK-LIIGVDRLDYSKGLPERLLAFERFLEE--------------------------- 287 (456)
T ss_pred ---------------------CCCe-EEEEccccccccCHHHHHHHHHHHHHh---------------------------
Confidence 1233 889999999999999999999998663
Q ss_pred CCC----EEEEEEe-----CCCChHHHHHHHHHc--------CC---CcEEEecCCCCcccHHHHHhcccEEEeeccCCC
Q 011969 315 YPR----LLFIITG-----KGPDKESYEEKIRRL--------RL---KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS 374 (474)
Q Consensus 315 ~~~----~~l~ivG-----~g~~~~~~~~~~~~l--------~l---~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~ 374 (474)
+|+ +.|+++| ++++.+++++.++++ +. ..|.+++..++.+++..+|+.||++|+ +|.
T Consensus 288 ~p~~~~~v~Lv~v~~p~rg~~~~~~~l~~~i~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~aly~aaDv~vv---~S~ 364 (456)
T TIGR02400 288 HPEWRGKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREELMALYRAADVGLV---TPL 364 (456)
T ss_pred CccccCceEEEEEecCCccCchHHHHHHHHHHHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHHHHhCcEEEE---Ccc
Confidence 454 5677774 445556666666654 11 125666655899999999999999999 788
Q ss_pred CCCCchHHHHHHhcCCc----EEEecccccccccccCCcEEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc
Q 011969 375 GLDLPMKVVDMFGCGLP----VCAVSYSCIEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG 448 (474)
Q Consensus 375 ~e~~p~kv~Eama~G~P----Via~~~~~~~e~v~~~~~G~l~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~ 448 (474)
.||||++++||||||+| ||+|+.+|..+.+. +|++++ |+++++++|.++++. +++++++..+..++..
T Consensus 365 ~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~~~l~---~gllVnP~d~~~lA~aI~~aL~~---~~~er~~r~~~~~~~v 438 (456)
T TIGR02400 365 RDGMNLVAKEYVAAQDPKDGVLILSEFAGAAQELN---GALLVNPYDIDGMADAIARALTM---PLEEREERHRAMMDKL 438 (456)
T ss_pred ccccCccHHHHHHhcCCCCceEEEeCCCCChHHhC---CcEEECCCCHHHHHHHHHHHHcC---CHHHHHHHHHHHHHHH
Confidence 99999999999999999 99999888877773 788986 799999999999986 5677777777777766
Q ss_pred cccchHH
Q 011969 449 LSARWAT 455 (474)
Q Consensus 449 ~~~~w~~ 455 (474)
.++++..
T Consensus 439 ~~~~~~~ 445 (456)
T TIGR02400 439 RKNDVQR 445 (456)
T ss_pred hhCCHHH
Confidence 5666644
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib |
| >PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.6e-18 Score=177.34 Aligned_cols=327 Identities=18% Similarity=0.172 Sum_probs=194.1
Q ss_pred eEEEEEeCCCCCCchHHHHHHHHHhhCCCeEEEEecCCCCCCcceeccCCeEEEEeecCCCCCCCCCchhHHHHHHHHHH
Q 011969 6 RACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPL 85 (474)
Q Consensus 6 ~~~i~~~~~~g~~~r~~~~a~~l~~~~g~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (474)
+++|...| -||.--....+..|.+. ++++.+++..+.....+... .++.++.++ ..+ +...+..+.+.+
T Consensus 3 ki~i~~Gg-t~G~i~~a~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~-----~~g---~~~~~~~~~~~~ 71 (380)
T PRK00025 3 RIAIVAGE-VSGDLLGAGLIRALKAR-APNLEFVGVGGPRMQAAGCE-SLFDMEELA-----VMG---LVEVLPRLPRLL 71 (380)
T ss_pred eEEEEecC-cCHHHHHHHHHHHHHhc-CCCcEEEEEccHHHHhCCCc-cccCHHHhh-----hcc---HHHHHHHHHHHH
Confidence 45555444 44433222356666664 88999998665432222222 233333333 111 111222221111
Q ss_pred HHHHHHHHHHhhhcCCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhh
Q 011969 86 IQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGK 165 (474)
Q Consensus 86 ~~~~~~~~~~~~~~~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 165 (474)
.... .+...+ +..+||+||++..+.++..+ +.. ++..++|+++..++..+ .... . .. +.+.+
T Consensus 72 ~~~~-~~~~~l-~~~kPdivi~~~~~~~~~~~-a~~-a~~~~ip~i~~~~~~~~-------~~~~---~---~~-~~~~~ 133 (380)
T PRK00025 72 KIRR-RLKRRL-LAEPPDVFIGIDAPDFNLRL-EKK-LRKAGIPTIHYVSPSVW-------AWRQ---G---RA-FKIAK 133 (380)
T ss_pred HHHH-HHHHHH-HHcCCCEEEEeCCCCCCHHH-HHH-HHHCCCCEEEEeCCchh-------hcCc---h---HH-HHHHH
Confidence 1111 111222 23789999998754444332 222 34458998887665311 0000 1 11 12357
Q ss_pred hcCEEEEeCHHHHHHHHHHhCCceEEEeCCCCCCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhh
Q 011969 166 MANGCLCVTQAMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFT 245 (474)
Q Consensus 166 ~ad~vi~vS~~~~~~l~~~~~~~~~vi~n~~~~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (474)
.+|.+++.++..++.+.+ .|.++.++.|...+...+.. .+...+.+++
T Consensus 134 ~~d~i~~~~~~~~~~~~~-~g~~~~~~G~p~~~~~~~~~--~~~~~~~~l~----------------------------- 181 (380)
T PRK00025 134 ATDHVLALFPFEAAFYDK-LGVPVTFVGHPLADAIPLLP--DRAAARARLG----------------------------- 181 (380)
T ss_pred HHhhheeCCccCHHHHHh-cCCCeEEECcCHHHhccccc--ChHHHHHHcC-----------------------------
Confidence 889999999998888766 46664444333222221111 2234444554
Q ss_pred cccccccccCCCCCeEEEEEeecccC--CCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEE
Q 011969 246 SLAGIDVFLKPNRPALVVSSTSWTPD--EDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIIT 323 (474)
Q Consensus 246 ~~~~~~~~~~~~~~~~i~~~G~l~~~--k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iv 323 (474)
++++++.++++.|+-... +..+.+++++..+.++ .|+++++++
T Consensus 182 --------~~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~---------------------------~~~~~~ii~ 226 (380)
T PRK00025 182 --------LDPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQR---------------------------YPDLRFVLP 226 (380)
T ss_pred --------CCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHh---------------------------CCCeEEEEe
Confidence 334556455666643322 4468888999888663 678999999
Q ss_pred eC-CCChHHHHHHHHHc-CCCcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEe------
Q 011969 324 GK-GPDKESYEEKIRRL-RLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV------ 395 (474)
Q Consensus 324 G~-g~~~~~~~~~~~~l-~l~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~------ 395 (474)
|+ ++..+++++.++++ ++. +.+. .+++..+|+.||++++ +| |...+|||+||+|+|++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~-v~~~-----~~~~~~~~~~aDl~v~---~s-----G~~~lEa~a~G~PvI~~~~~~~~ 292 (380)
T PRK00025 227 LVNPKRREQIEEALAEYAGLE-VTLL-----DGQKREAMAAADAALA---AS-----GTVTLELALLKVPMVVGYKVSPL 292 (380)
T ss_pred cCChhhHHHHHHHHhhcCCCC-eEEE-----cccHHHHHHhCCEEEE---Cc-----cHHHHHHHHhCCCEEEEEccCHH
Confidence 86 55567788877777 553 5443 3589999999999999 34 56778999999999987
Q ss_pred -----------cccccccccccCC--cEEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Q 011969 396 -----------SYSCIEELVKVDK--NGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLE 446 (474)
Q Consensus 396 -----------~~~~~~e~v~~~~--~G~l~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~ 446 (474)
+.+++++++.++. .|++.+ |++++++++..++++ ++.+++|++++.+
T Consensus 293 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ll~~----~~~~~~~~~~~~~ 354 (380)
T PRK00025 293 TFWIAKRLVKVPYVSLPNLLAGRELVPELLQEEATPEKLARALLPLLAD----GARRQALLEGFTE 354 (380)
T ss_pred HHHHHHHHHcCCeeehHHHhcCCCcchhhcCCCCCHHHHHHHHHHHhcC----HHHHHHHHHHHHH
Confidence 3445566665543 445554 689999999999984 8899999998754
|
|
| >PRK13608 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.4e-18 Score=178.39 Aligned_cols=254 Identities=12% Similarity=0.175 Sum_probs=173.6
Q ss_pred CCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhhhcCEEEEeCHHHHH
Q 011969 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179 (474)
Q Consensus 100 ~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~ 179 (474)
.+||+|+++.| .+.+ .....++..++|++....|+. .. . +++.+.+|.+++.|+.+++
T Consensus 103 ~kPDvVi~~~p--~~~~-~~l~~~~~~~iP~~~v~td~~-------~~-~-----------~w~~~~~d~~~v~s~~~~~ 160 (391)
T PRK13608 103 EKPDLILLTFP--TPVM-SVLTEQFNINIPVATVMTDYR-------LH-K-----------NWITPYSTRYYVATKETKQ 160 (391)
T ss_pred hCcCEEEECCc--HHHH-HHHHHhcCCCCCEEEEeCCCC-------cc-c-----------ccccCCCCEEEECCHHHHH
Confidence 79999999765 2222 111122334788765555541 11 1 1234789999999999999
Q ss_pred HHHHHhCCc---eEEEeCCCCCCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhcccccccccCC
Q 011969 180 ELAQNWGIK---ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKP 256 (474)
Q Consensus 180 ~l~~~~~~~---~~vi~n~~~~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (474)
.+.+. |.+ +.++.++..+.|.+.. .+...+.+++ +++
T Consensus 161 ~l~~~-gi~~~ki~v~GiPv~~~f~~~~--~~~~~~~~~~-------------------------------------l~~ 200 (391)
T PRK13608 161 DFIDV-GIDPSTVKVTGIPIDNKFETPI--DQKQWLIDNN-------------------------------------LDP 200 (391)
T ss_pred HHHHc-CCCHHHEEEECeecChHhcccc--cHHHHHHHcC-------------------------------------CCC
Confidence 98774 654 5555444434444322 1233444554 345
Q ss_pred CCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEE-eCCCChHHHHHH
Q 011969 257 NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIIT-GKGPDKESYEEK 335 (474)
Q Consensus 257 ~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iv-G~g~~~~~~~~~ 335 (474)
+.+.+++++|+++..|+++.+++++.. . .++++++++ |.++ +..++.
T Consensus 201 ~~~~ilv~~G~lg~~k~~~~li~~~~~--~----------------------------~~~~~~vvv~G~~~--~l~~~l 248 (391)
T PRK13608 201 DKQTILMSAGAFGVSKGFDTMITDILA--K----------------------------SANAQVVMICGKSK--ELKRSL 248 (391)
T ss_pred CCCEEEEECCCcccchhHHHHHHHHHh--c----------------------------CCCceEEEEcCCCH--HHHHHH
Confidence 667678899999988999999998532 1 367788655 4432 212233
Q ss_pred HHHcCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEec-ccc----cccccccCCc
Q 011969 336 IRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS-YSC----IEELVKVDKN 409 (474)
Q Consensus 336 ~~~l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~-~~~----~~e~v~~~~~ 409 (474)
.+.++. ++|.|+|. .++++.+|+.||++|. .+ .|+++.|||+||+|+|+++ .++ ...++.+.+.
T Consensus 249 ~~~~~~~~~v~~~G~---~~~~~~~~~~aDl~I~---k~----gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~G~ 318 (391)
T PRK13608 249 TAKFKSNENVLILGY---TKHMNEWMASSQLMIT---KP----GGITISEGLARCIPMIFLNPAPGQELENALYFEEKGF 318 (391)
T ss_pred HHHhccCCCeEEEec---cchHHHHHHhhhEEEe---CC----chHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhCCc
Confidence 333333 58999998 4789999999999997 22 3679999999999999986 333 2234456778
Q ss_pred EEEeCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHH
Q 011969 410 GLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHA 461 (474)
Q Consensus 410 G~l~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ 461 (474)
|+...|+++++++|..++++ ++.+++|++++++....++|+...+.+.
T Consensus 319 g~~~~~~~~l~~~i~~ll~~----~~~~~~m~~~~~~~~~~~s~~~i~~~l~ 366 (391)
T PRK13608 319 GKIADTPEEAIKIVASLTNG----NEQLTNMISTMEQDKIKYATQTICRDLL 366 (391)
T ss_pred EEEeCCHHHHHHHHHHHhcC----HHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 88888999999999999984 8899999999999887788876665543
|
|
| >KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.81 E-value=8.4e-17 Score=159.59 Aligned_cols=366 Identities=18% Similarity=0.254 Sum_probs=234.0
Q ss_pred CCCchHHHHHHHHH-hhCCCeEEEEecCCCC-CCcc-----------eeccCCeEEEEeecCC-CCCCCCCchhHHHHHH
Q 011969 16 GRSPRMQYQALSLA-RQMSLEVDVVAYGGSK-PHAA-----------ILEHPSIHIHTMTQWP-TIPRGLPKVLKPVLLL 81 (474)
Q Consensus 16 g~~~r~~~~a~~l~-~~~g~eV~Vv~~~~~~-~~~~-----------~~~~~gi~i~~~~~~~-~~~~~~~~~~~~~~~~ 81 (474)
||..|+.--|.... ++--..+.||..++.. ...+ .++.++|.++.+.... ..-+.+++ +..+
T Consensus 57 GGGErVLW~Avr~~q~k~~n~~~viYsGD~n~t~~~IL~k~k~~F~idlDs~nI~Fi~Lk~R~lVea~~~~h----fTll 132 (465)
T KOG1387|consen 57 GGGERVLWKAVRITQRKFPNNVIVIYSGDFNVTPENILNKVKNKFDIDLDSDNIFFIYLKLRYLVEASTWKH----FTLL 132 (465)
T ss_pred CCcceehhHHHHHHHHhCCCceEEEEeCCCCCCHHHHHHHHHHhcCceecccceEEEEEEeeeeeecccccc----eehH
Confidence 56678776665444 4322344444433311 1111 2345688888887321 01111222 2222
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCch-hhhhhhccC--CCchH------
Q 011969 82 LKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFG-YTLLSLSLG--RRSHF------ 152 (474)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~-~~~~~~~~~--~~~~~------ 152 (474)
...+.....-+-.+++ -.||+.+-+-...+. .. ..+++.++|++...|-.. .+++-..+. ..+.+
T Consensus 133 gQaigsmIl~~Eai~r--~~Pdi~IDtMGY~fs-~p---~~r~l~~~~V~aYvHYP~iS~DML~~l~qrq~s~~l~~~Kl 206 (465)
T KOG1387|consen 133 GQAIGSMILAFEAIIR--FPPDIFIDTMGYPFS-YP---IFRRLRRIPVVAYVHYPTISTDMLKKLFQRQKSGILVWGKL 206 (465)
T ss_pred HHHHHHHHHHHHHHHh--CCchheEecCCCcch-hH---HHHHHccCceEEEEecccccHHHHHHHHhhhhcchhhhHHH
Confidence 2222221111222232 679998765432221 11 235588999999999653 112111111 01101
Q ss_pred --HHHHHHHHHHHhhhcCEEEEeCHHHHHHHHHHhCCc-eEEEeCCCCCCCCCCChHHHHHHHHhhhhccCCCCCccccc
Q 011969 153 --VSIYRWIEKYYGKMANGCLCVTQAMQHELAQNWGIK-ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCV 229 (474)
Q Consensus 153 --~~~~~~~e~~~~~~ad~vi~vS~~~~~~l~~~~~~~-~~vi~n~~~~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 229 (474)
.+++..+-+.+...||.+.+.|.++++.+.+-|+.. +.++| .|.+.++-.. ..+
T Consensus 207 aY~rlFa~lY~~~G~~ad~vm~NssWT~nHI~qiW~~~~~~iVy-------PPC~~e~lks---~~~------------- 263 (465)
T KOG1387|consen 207 AYWRLFALLYQSAGSKADIVMTNSSWTNNHIKQIWQSNTCSIVY-------PPCSTEDLKS---KFG------------- 263 (465)
T ss_pred HHHHHHHHHHHhccccceEEEecchhhHHHHHHHhhccceeEEc-------CCCCHHHHHH---Hhc-------------
Confidence 133344455566789999999999999999998765 45543 3444332111 111
Q ss_pred cccccCCcCcchhhhhcccccccccCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcC
Q 011969 230 SNAGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISD 309 (474)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (474)
....+...++++|++.|.|+.. +++.++....+ +- +
T Consensus 264 ------------------------te~~r~~~ll~l~Q~RPEKnH~-~Lql~Al~~~~------~p-------------l 299 (465)
T KOG1387|consen 264 ------------------------TEGERENQLLSLAQFRPEKNHK-ILQLFALYLKN------EP-------------L 299 (465)
T ss_pred ------------------------ccCCcceEEEEEeecCcccccH-HHHHHHHHHhc------Cc-------------h
Confidence 1133455899999999999999 55665554331 00 0
Q ss_pred CccccCCCEEEEEEeCCCCh------HHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHH
Q 011969 310 GKQYLYPRLLFIITGKGPDK------ESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKV 382 (474)
Q Consensus 310 ~~~~~~~~~~l~ivG~g~~~------~~~~~~~~~l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv 382 (474)
....++++|+|+|+...+ ..++..++.|.+ ++|.|.-- +|.+++..+|+.|.++|. .=..|.||..+
T Consensus 300 --~a~~~~iKL~ivGScRneeD~ervk~Lkd~a~~L~i~~~v~F~~N-~Py~~lv~lL~~a~iGvh---~MwNEHFGIsV 373 (465)
T KOG1387|consen 300 --EASVSPIKLIIVGSCRNEEDEERVKSLKDLAEELKIPKHVQFEKN-VPYEKLVELLGKATIGVH---TMWNEHFGISV 373 (465)
T ss_pred --hhccCCceEEEEeccCChhhHHHHHHHHHHHHhcCCccceEEEec-CCHHHHHHHhccceeehh---hhhhhhcchhH
Confidence 012467999999976332 446677888888 68999976 999999999999999998 55889999999
Q ss_pred HHHHhcCCcEEEecccc-cccccccC---CcEEEeCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc---cccchHH
Q 011969 383 VDMFGCGLPVCAVSYSC-IEELVKVD---KNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG---LSARWAT 455 (474)
Q Consensus 383 ~Eama~G~PVia~~~~~-~~e~v~~~---~~G~l~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~w~~ 455 (474)
+||||+|+-.|+.+.|| .-++|.+. .+|++.++.++.++++.++.+. +.+++..||+++++.. ++..+++
T Consensus 374 VEyMAAGlIpi~h~SgGP~lDIV~~~~G~~tGFla~t~~EYaE~iLkIv~~---~~~~r~~~r~~AR~s~~RFsE~~F~k 450 (465)
T KOG1387|consen 374 VEYMAAGLIPIVHNSGGPLLDIVTPWDGETTGFLAPTDEEYAEAILKIVKL---NYDERNMMRRNARKSLARFGELKFDK 450 (465)
T ss_pred HHHHhcCceEEEeCCCCCceeeeeccCCccceeecCChHHHHHHHHHHHHc---CHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 99999999888887544 45777653 4899999999999999999997 7888999999998654 4567899
Q ss_pred HHHHHHHHHHHH
Q 011969 456 EWEEHAKPLITE 467 (474)
Q Consensus 456 ~~~~~~~~~~~~ 467 (474)
.|+..+.++++|
T Consensus 451 d~~~~i~kll~e 462 (465)
T KOG1387|consen 451 DWENPICKLLEE 462 (465)
T ss_pred hHhHHHHHhhcc
Confidence 999888888775
|
|
| >COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.6e-16 Score=168.59 Aligned_cols=292 Identities=17% Similarity=0.127 Sum_probs=206.1
Q ss_pred CCCCEEEEeCCCChhHHHHHHHHHh----hCCCcEEEEecCchhhhhhh--ccC-CCchHHHHHH----------HHHHH
Q 011969 100 ASPDVFLVQNPPSVPTLVAVKWASS----LRRSAFIVDWHNFGYTLLSL--SLG-RRSHFVSIYR----------WIEKY 162 (474)
Q Consensus 100 ~~~Dvi~~~~~~~~~~~~~~~~~~~----~~~~~~i~~~h~~~~~~~~~--~~~-~~~~~~~~~~----------~~e~~ 162 (474)
..||+||+|+ ..+.++..+++. ...+|.|+|+|++.|.-... ... ..-++ ..+. .+.|.
T Consensus 129 ~~pDIvH~hD---Wqt~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~-~~~~~~~l~~~~~~~~lK~ 204 (487)
T COG0297 129 WLPDIVHAHD---WQTGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPF-EAYASFGLEFYGQISFLKG 204 (487)
T ss_pred CCCCEEEeec---HHHHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcCCH-HHhhhceeeecCcchhhhh
Confidence 4799999999 555555555555 45789999999986422210 000 00111 1111 44566
Q ss_pred HhhhcCEEEEeCHHHHHHHHHH-hC-----------CceEEEeCC-CCCCCCCCChH----------------HHHHHHH
Q 011969 163 YGKMANGCLCVTQAMQHELAQN-WG-----------IKATVLYDQ-PPEFFHPTSLE----------------EKHELFC 213 (474)
Q Consensus 163 ~~~~ad~vi~vS~~~~~~l~~~-~~-----------~~~~vi~n~-~~~~f~~~~~~----------------~~~~~~~ 213 (474)
-...||.|.+||...++++... +| .+..-|.|+ +.+.+.|.... .+..+.+
T Consensus 205 gi~~ad~vttVSptYa~Ei~t~~~g~gl~g~l~~~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~~L~~ 284 (487)
T COG0297 205 GLYYADAVTTVSPTYAGEIYTPEYGEGLEGLLSWRSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKVALQE 284 (487)
T ss_pred hheeccEEEEECHHHHHhhccccccccchhhhhhccccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHHHHHH
Confidence 6679999999999998887722 22 125667776 33445544321 1222333
Q ss_pred hhhhccCCCCCccccccccccCCcCcchhhhhcccccccccCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhc
Q 011969 214 RLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILN 293 (474)
Q Consensus 214 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~ 293 (474)
++|+ ....+.| ++.++||++.+||++.+++++..+.+.
T Consensus 285 ~~gL-----------------------------------~~~~~~p-l~~~vsRl~~QKG~dl~~~~i~~~l~~------ 322 (487)
T COG0297 285 RLGL-----------------------------------DVDLPGP-LFGFVSRLTAQKGLDLLLEAIDELLEQ------ 322 (487)
T ss_pred HhCC-----------------------------------CCCCCCc-EEEEeeccccccchhHHHHHHHHHHHh------
Confidence 3331 1123445 999999999999999999999998873
Q ss_pred cCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCC--hHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcccEEEeecc
Q 011969 294 EDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD--KESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHT 371 (474)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~--~~~~~~~~~~l~l~~V~f~g~~v~~~~~~~~l~~adv~v~~~~ 371 (474)
.+.+++.|.|.. ++.+...++++.. ++.+.-. .+..-...++..||++++
T Consensus 323 -----------------------~~~~vilG~gd~~le~~~~~la~~~~~-~~~~~i~-~~~~la~~i~agaD~~lm--- 374 (487)
T COG0297 323 -----------------------GWQLVLLGTGDPELEEALRALASRHPG-RVLVVIG-YDEPLAHLIYAGADVILM--- 374 (487)
T ss_pred -----------------------CceEEEEecCcHHHHHHHHHHHHhcCc-eEEEEee-ecHHHHHHHHhcCCEEEe---
Confidence 489999999932 2445555555543 4444433 788888999999999999
Q ss_pred CCCCCCCchHHHHHHhcCCcEEEeccccccccccc--------CCcEEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHH
Q 011969 372 SSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKV--------DKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLR 441 (474)
Q Consensus 372 ~s~~e~~p~kv~Eama~G~PVia~~~~~~~e~v~~--------~~~G~l~~--~~~~la~~i~~l~~~~~~~~~~~~~~~ 441 (474)
||++|+||..=++||..|++.|+...||.++.|.+ ..+|+++. ++++++.+|.+.+.-+..++...+.+.
T Consensus 375 PSrfEPcGL~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f~~~~~~~l~~al~rA~~~y~~~~~~w~~~~ 454 (487)
T COG0297 375 PSRFEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLFLQTNPDHLANALRRALVLYRAPPLLWRKVQ 454 (487)
T ss_pred CCcCcCCcHHHHHHHHcCCcceEcccCCccceecCccchhccCceeEEEEecCCHHHHHHHHHHHHHHhhCCHHHHHHHH
Confidence 79999999999999999999999999999999975 47999995 799999999998876665566688888
Q ss_pred HHHHHhccccchHHHHHHHHHHHHHHH
Q 011969 442 NGTLEMGLSARWATEWEEHAKPLITEV 468 (474)
Q Consensus 442 ~~~~~~~~~~~w~~~~~~~~~~~~~~~ 468 (474)
.++.. ..++|+...++. ..+++.+
T Consensus 455 ~~~m~--~d~sw~~sa~~y-~~lY~~~ 478 (487)
T COG0297 455 PNAMG--ADFSWDLSAKEY-VELYKPL 478 (487)
T ss_pred Hhhcc--cccCchhHHHHH-HHHHHHH
Confidence 88877 478898777553 3344433
|
|
| >TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.4e-17 Score=171.64 Aligned_cols=268 Identities=16% Similarity=0.130 Sum_probs=172.2
Q ss_pred CCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCchHHHHHHHH-HHHHhhhcCEEEEeCHHHH
Q 011969 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWI-EKYYGKMANGCLCVTQAMQ 178 (474)
Q Consensus 100 ~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~-e~~~~~~ad~vi~vS~~~~ 178 (474)
.+||+||+|+.. ...+++.++++..++|++...++. . +.+...++.. .. ...+.+.||.++++|+..+
T Consensus 85 ~~pDiv~~~gd~--~~~la~a~aa~~~~ipv~h~~~g~-~-----s~~~~~~~~~---~~~r~~~~~~ad~~~~~s~~~~ 153 (365)
T TIGR00236 85 EKPDIVLVQGDT--TTTLAGALAAFYLQIPVGHVEAGL-R-----TGDRYSPMPE---EINRQLTGHIADLHFAPTEQAK 153 (365)
T ss_pred cCCCEEEEeCCc--hHHHHHHHHHHHhCCCEEEEeCCC-C-----cCCCCCCCcc---HHHHHHHHHHHHhccCCCHHHH
Confidence 789999999753 334457778888899976433322 1 0111111110 11 1223456899999999999
Q ss_pred HHHHHHhCCc---eEEEeCCC-CCCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhccccccccc
Q 011969 179 HELAQNWGIK---ATVLYDQP-PEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFL 254 (474)
Q Consensus 179 ~~l~~~~~~~---~~vi~n~~-~~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (474)
+.+.+. |.+ +.++.|+. +..+.+........++++++
T Consensus 154 ~~l~~~-G~~~~~I~vign~~~d~~~~~~~~~~~~~~~~~~~-------------------------------------- 194 (365)
T TIGR00236 154 DNLLRE-NVKADSIFVTGNTVIDALLTNVEIAYSSPVLSEFG-------------------------------------- 194 (365)
T ss_pred HHHHHc-CCCcccEEEeCChHHHHHHHHHhhccchhHHHhcC--------------------------------------
Confidence 999874 654 67777763 22111111001122222222
Q ss_pred CCCCCeEEEEEe-ec-ccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCChHHH
Q 011969 255 KPNRPALVVSST-SW-TPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESY 332 (474)
Q Consensus 255 ~~~~~~~i~~~G-~l-~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~~ 332 (474)
.+.+ ++++++ +. ...|+++.+++|+..+.++ .|+++++++|.+... ..
T Consensus 195 -~~~~-~vl~~~hr~~~~~k~~~~ll~a~~~l~~~---------------------------~~~~~~vi~~~~~~~-~~ 244 (365)
T TIGR00236 195 -EDKR-YILLTLHRRENVGEPLENIFKAIREIVEE---------------------------FEDVQIVYPVHLNPV-VR 244 (365)
T ss_pred -CCCC-EEEEecCchhhhhhHHHHHHHHHHHHHHH---------------------------CCCCEEEEECCCChH-HH
Confidence 2233 444444 43 2458999999999988663 578889888654322 12
Q ss_pred HHHHHHcCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEe-cccccccccccCCcE
Q 011969 333 EEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV-SYSCIEELVKVDKNG 410 (474)
Q Consensus 333 ~~~~~~l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~-~~~~~~e~v~~~~~G 410 (474)
.+..+.++. ++|.|++. ++..++..+++.||+++. +| |..++|||+||+|||++ +.++..+++..+ .|
T Consensus 245 ~~~~~~~~~~~~v~~~~~-~~~~~~~~~l~~ad~vv~---~S-----g~~~~EA~a~g~PvI~~~~~~~~~e~~~~g-~~ 314 (365)
T TIGR00236 245 EPLHKHLGDSKRVHLIEP-LEYLDFLNLAANSHLILT---DS-----GGVQEEAPSLGKPVLVLRDTTERPETVEAG-TN 314 (365)
T ss_pred HHHHHHhCCCCCEEEECC-CChHHHHHHHHhCCEEEE---CC-----hhHHHHHHHcCCCEEECCCCCCChHHHhcC-ce
Confidence 223444555 68999998 889999999999999987 44 34689999999999996 567888888755 45
Q ss_pred EEeC-CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHHHHHH
Q 011969 411 LLFS-SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLI 465 (474)
Q Consensus 411 ~l~~-~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 465 (474)
.+++ |++++++++..++++ ++.+++++++...+... ..++++++.+.
T Consensus 315 ~lv~~d~~~i~~ai~~ll~~----~~~~~~~~~~~~~~g~~----~a~~ri~~~l~ 362 (365)
T TIGR00236 315 KLVGTDKENITKAAKRLLTD----PDEYKKMSNASNPYGDG----EASERIVEELL 362 (365)
T ss_pred EEeCCCHHHHHHHHHHHHhC----hHHHHHhhhcCCCCcCc----hHHHHHHHHHH
Confidence 5554 899999999999984 77888887766443322 34455554443
|
Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other. |
| >cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.5e-17 Score=170.16 Aligned_cols=247 Identities=16% Similarity=0.095 Sum_probs=167.2
Q ss_pred CCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhhhcCEEEEeCHHHHH
Q 011969 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179 (474)
Q Consensus 100 ~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~ 179 (474)
.+||+||+|+.. ...+++.++++..++|++...|+.. + .....+.. +....+.+.+|.+++.|+..++
T Consensus 87 ~~pDvV~~~g~~--~~~~~~~~aa~~~~iPvv~~~~g~~-s-----~~~~~~~~----~~r~~~~~~ad~~~~~s~~~~~ 154 (363)
T cd03786 87 EKPDLVLVLGDT--NETLAAALAAFKLGIPVAHVEAGLR-S-----FDRGMPDE----ENRHAIDKLSDLHFAPTEEARR 154 (363)
T ss_pred hCCCEEEEeCCc--hHHHHHHHHHHHcCCCEEEEecccc-c-----CCCCCCch----HHHHHHHHHhhhccCCCHHHHH
Confidence 689999999743 2333466677778999887655531 0 00111111 1222355788999999999999
Q ss_pred HHHHHhCCc---eEEEeCCCCCCC--CCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhccccccccc
Q 011969 180 ELAQNWGIK---ATVLYDQPPEFF--HPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFL 254 (474)
Q Consensus 180 ~l~~~~~~~---~~vi~n~~~~~f--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (474)
++.+. |.+ +.++.|+..+.+ .+... .....+..++ +
T Consensus 155 ~l~~~-G~~~~kI~vign~v~d~~~~~~~~~-~~~~~~~~~~-------------------------------------~ 195 (363)
T cd03786 155 NLLQE-GEPPERIFVVGNTMIDALLRLLELA-KKELILELLG-------------------------------------L 195 (363)
T ss_pred HHHHc-CCCcccEEEECchHHHHHHHHHHhh-ccchhhhhcc-------------------------------------c
Confidence 98764 654 666666532111 10000 0000111111 2
Q ss_pred CCCCCeEEEEEeeccc---CCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCChHH
Q 011969 255 KPNRPALVVSSTSWTP---DEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKES 331 (474)
Q Consensus 255 ~~~~~~~i~~~G~l~~---~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~ 331 (474)
++.+++++++|+... .|+++.+++|++.+.+ +++.+++.|.++..+.
T Consensus 196 -~~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~-----------------------------~~~~vi~~~~~~~~~~ 245 (363)
T cd03786 196 -LPKKYILVTLHRVENVDDGEQLEEILEALAELAE-----------------------------EDVPVVFPNHPRTRPR 245 (363)
T ss_pred -CCCCEEEEEeCCccccCChHHHHHHHHHHHHHHh-----------------------------cCCEEEEECCCChHHH
Confidence 345557788898875 7999999999998754 2577888787777788
Q ss_pred HHHHHHHcCC--CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecc-cccccccccCC
Q 011969 332 YEEKIRRLRL--KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY-SCIEELVKVDK 408 (474)
Q Consensus 332 ~~~~~~~l~l--~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~-~~~~e~v~~~~ 408 (474)
+++.++++++ ++|.|.|. .+.+++..+|+.||++|. +|.+ .+.|||++|+|||+++. ++..+.++.+
T Consensus 246 l~~~~~~~~~~~~~v~~~~~-~~~~~~~~l~~~ad~~v~---~Sgg-----i~~Ea~~~g~PvI~~~~~~~~~~~~~~g- 315 (363)
T cd03786 246 IREAGLEFLGHHPNVLLISP-LGYLYFLLLLKNADLVLT---DSGG-----IQEEASFLGVPVLNLRDRTERPETVESG- 315 (363)
T ss_pred HHHHHHhhccCCCCEEEECC-cCHHHHHHHHHcCcEEEE---cCcc-----HHhhhhhcCCCEEeeCCCCccchhhhee-
Confidence 9988888875 68999987 778999999999999998 4432 47899999999999974 5566666444
Q ss_pred cEEEeC-CHHHHHHHHHHHHhCCCCCHHHHHHHH
Q 011969 409 NGLLFS-SSSELADQLLMLFKGFPDDSDVLKKLR 441 (474)
Q Consensus 409 ~G~l~~-~~~~la~~i~~l~~~~~~~~~~~~~~~ 441 (474)
.+..+. |+++++++|..++++ +..+++|+
T Consensus 316 ~~~~~~~~~~~i~~~i~~ll~~----~~~~~~~~ 345 (363)
T cd03786 316 TNVLVGTDPEAILAAIEKLLSD----EFAYSLMS 345 (363)
T ss_pred eEEecCCCHHHHHHHHHHHhcC----chhhhcCC
Confidence 344444 699999999999985 55555554
|
The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st |
| >KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.1e-17 Score=175.48 Aligned_cols=293 Identities=19% Similarity=0.188 Sum_probs=190.8
Q ss_pred CCCCEEEEeCCCChhHHHHHHHHHhhCC----CcEEEEecCchhhhhhhccCCCchH-HHHHHHHHHHHhhhcCEEEEeC
Q 011969 100 ASPDVFLVQNPPSVPTLVAVKWASSLRR----SAFIVDWHNFGYTLLSLSLGRRSHF-VSIYRWIEKYYGKMANGCLCVT 174 (474)
Q Consensus 100 ~~~Dvi~~~~~~~~~~~~~~~~~~~~~~----~~~i~~~h~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~ad~vi~vS 174 (474)
.+.|+++... . ....++...+.+ .++.+++|... ..++...+-...+ ....-+++......++.+++-|
T Consensus 144 ~~~d~~i~d~---~--~~~~~l~~~~~~p~~~~~i~~~~h~~~-~lla~r~g~~~~l~~~~l~~~e~e~~~~~~~~~~ns 217 (495)
T KOG0853|consen 144 EKVDPIIEDF---V--SACVPLLKQLSGPDVIIKIYFYCHFPD-SLLAKRLGVLKVLYRHALDKIEEETTGLAWKILVNS 217 (495)
T ss_pred hhhceeecch---H--HHHHHHHHHhcCCcccceeEEeccchH-HHhccccCccceeehhhhhhhhhhhhhccceEecch
Confidence 4577776655 2 222444455553 55667888763 2332222211111 2233455666667889999999
Q ss_pred HHHHHHHHHHhC----CceEEEeCCCC-CCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhcccc
Q 011969 175 QAMQHELAQNWG----IKATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAG 249 (474)
Q Consensus 175 ~~~~~~l~~~~~----~~~~vi~n~~~-~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (474)
...+..++.... .++++.+-..+ ..+.+.--+...++..... ..++
T Consensus 218 ~~~~~~f~~~~~~L~~~d~~~~y~ei~~s~~~~~~~~~~~~~~~~~r--~~~~--------------------------- 268 (495)
T KOG0853|consen 218 YFTKRQFKATFVSLSNSDITSTYPEIDGSWFTYGQYESHLELRLPVR--LYRG--------------------------- 268 (495)
T ss_pred hhhhhhhhhhhhhcCCCCcceeeccccchhccccccccchhcccccc--eeee---------------------------
Confidence 988877765431 12444444433 2222210000111111100 0000
Q ss_pred cccccCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCC-CC
Q 011969 250 IDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKG-PD 328 (474)
Q Consensus 250 ~~~~~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g-~~ 328 (474)
-.+...++..+-++.+.||++.+++++..+... |.+ ...++.+++++|+. .+
T Consensus 269 -----v~~~d~~~~siN~~~pgkd~~l~l~a~~~~~~~-------------------i~~---~~~~~~hl~~~g~~G~d 321 (495)
T KOG0853|consen 269 -----VSGIDRFFPSINRFEPGKDQDLALPAFTLLHDS-------------------IPE---PSISSEHLVVAGSRGYD 321 (495)
T ss_pred -----ecccceEeeeeeecCCCCCceeehhhHHhhhcc-------------------cCC---CCCCceEEEEecCCCcc
Confidence 112233777888999999999999999988763 111 12367889999832 11
Q ss_pred ---------hHHHHHHHHHcCC--CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecc
Q 011969 329 ---------KESYEEKIRRLRL--KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY 397 (474)
Q Consensus 329 ---------~~~~~~~~~~l~l--~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~ 397 (474)
..++.++++++++ +.|.|+.. ..+...|...||......+|.. |.||.+.+|||+||+||+|++.
T Consensus 322 ~~~sen~~~~~el~~lie~~~l~g~~v~~~~s---~~~~~~yrl~adt~~v~~qPa~-E~FGiv~IEAMa~glPvvAt~~ 397 (495)
T KOG0853|consen 322 ERDSENVEYLKELLSLIEEYDLLGQFVWFLPS---TTRVAKYRLAADTKGVLYQPAN-EHFGIVPIEAMACGLPVVATNN 397 (495)
T ss_pred ccchhhHHHHHHHHHHHHHhCccCceEEEecC---CchHHHHHHHHhcceEEecCCC-CCccceeHHHHhcCCCEEEecC
Confidence 1567888999988 57888766 5555667777777777666666 9999999999999999999999
Q ss_pred cccccccccCCcEEEeC-CHH---HHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccc-cchHHHHHHHHH
Q 011969 398 SCIEELVKVDKNGLLFS-SSS---ELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLS-ARWATEWEEHAK 462 (474)
Q Consensus 398 ~~~~e~v~~~~~G~l~~-~~~---~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~w~~~~~~~~~ 462 (474)
||..|+|.++.+|++++ +.+ .+++++.++..+ ++.+.+|++++++...+ |+|...-++++.
T Consensus 398 GGP~EiV~~~~tG~l~dp~~e~~~~~a~~~~kl~~~----p~l~~~~~~~G~~rV~e~fs~~~~~~ri~~ 463 (495)
T KOG0853|consen 398 GGPAEIVVHGVTGLLIDPGQEAVAELADALLKLRRD----PELWARMGKNGLKRVKEMFSWQHYSERIAS 463 (495)
T ss_pred CCceEEEEcCCcceeeCCchHHHHHHHHHHHHHhcC----HHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 99999999999999997 444 699999999984 99999999999987744 999554444433
|
|
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=9.2e-18 Score=188.94 Aligned_cols=277 Identities=9% Similarity=0.043 Sum_probs=184.5
Q ss_pred CCCCEEEEeCCCChhHHHHHHHHHh-hCCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhhhcCEEEEeCHHHH
Q 011969 100 ASPDVFLVQNPPSVPTLVAVKWASS-LRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178 (474)
Q Consensus 100 ~~~Dvi~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~ 178 (474)
..-|+|.+|... .+++...++. ....++.+.+|-...+..- .+.-|.. +.+-+-+ -.||.|-..|....
T Consensus 146 ~~~d~vWvhDYh---L~llp~~lR~~~~~~~igfFlHiPFPs~e~---fr~lp~r---~~il~gl-l~aDligF~t~~y~ 215 (797)
T PLN03063 146 EEGDVVWCHDYH---LMFLPQYLKEYNNKMKVGWFLHTPFPSSEI---YKTLPSR---SELLRAV-LTADLIGFHTYDFA 215 (797)
T ss_pred CCCCEEEEecch---hhhHHHHHHHhCCCCcEEEEecCCCCCHHH---HhhCCCH---HHHHHHH-hcCCEEEeCCHHHH
Confidence 456899999943 3333444444 4567888889976321110 0111111 1111111 25777777777666
Q ss_pred HHHHHH----h------------C--CceEEEeCCCC-CCCCCCCh-HH----HHHHHHhhhhccCCCCCcccccccccc
Q 011969 179 HELAQN----W------------G--IKATVLYDQPP-EFFHPTSL-EE----KHELFCRLNKILHQPLGVQDCVSNAGM 234 (474)
Q Consensus 179 ~~l~~~----~------------~--~~~~vi~n~~~-~~f~~~~~-~~----~~~~~~~l~~~~~~~~~~~~~~~~~~~ 234 (474)
+.+.+. . | .++.++|+|.+ +.|.+... .+ ...+++++
T Consensus 216 r~Fl~~~~r~l~~~~~~~~i~~~gr~~~I~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~------------------- 276 (797)
T PLN03063 216 RHFLSACTRILGVEGTHEGVVDQGKVTRVAVFPIGIDPERFINTCELPEVKQHMKELKRFF------------------- 276 (797)
T ss_pred HHHHHHHHHHhCccccCCceEECCeEEEEEEEecccCHHHHHHHhcChhHHHHHHHHHHhc-------------------
Confidence 655431 1 1 22678888844 45543311 01 11122221
Q ss_pred CCcCcchhhhhcccccccccCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCcccc
Q 011969 235 EGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYL 314 (474)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (474)
.+++ +|+++||+.+.||++.+++|+..+.++
T Consensus 277 ---------------------~~~~-lIl~VgRLd~~KGi~~lL~Afe~lL~~--------------------------- 307 (797)
T PLN03063 277 ---------------------AGRK-VILGVDRLDMIKGIPQKYLAFEKFLEE--------------------------- 307 (797)
T ss_pred ---------------------CCCe-EEEEecccccccCHHHHHHHHHHHHHh---------------------------
Confidence 1233 889999999999999999999998763
Q ss_pred CCCE----EEEEEe-----CCCChHHHHHHHHHcC--CC---------cEEEecCCCCcccHHHHHhcccEEEeeccCCC
Q 011969 315 YPRL----LFIITG-----KGPDKESYEEKIRRLR--LK---------RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS 374 (474)
Q Consensus 315 ~~~~----~l~ivG-----~g~~~~~~~~~~~~l~--l~---------~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~ 374 (474)
+|++ .|+.++ ++++.+++++.++++. ++ -|.+++..++.+++..+|+.||++|+ +|.
T Consensus 308 ~P~~~~kvvLvqia~psr~~~~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~~ADvfvv---tSl 384 (797)
T PLN03063 308 NPEWRDKVMLVQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYAITDVMLV---TSL 384 (797)
T ss_pred CccccCcEEEEEEecCCCCchHHHHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHHhCCEEEe---Ccc
Confidence 5654 344333 4455566777776663 21 25555555899999999999999999 799
Q ss_pred CCCCchHHHHHHhcCCc----EEEecccccccccccCCcEEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc
Q 011969 375 GLDLPMKVVDMFGCGLP----VCAVSYSCIEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG 448 (474)
Q Consensus 375 ~e~~p~kv~Eama~G~P----Via~~~~~~~e~v~~~~~G~l~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~ 448 (474)
.||+|++++||||||+| +|.|..+|..+.+ +.+|++++ |+++++++|..+++. +++++++..+..+++.
T Consensus 385 rEGmnLv~lEamA~g~p~~gvlVlSe~~G~~~~l--~~~allVnP~D~~~lA~AI~~aL~m---~~~er~~r~~~~~~~v 459 (797)
T PLN03063 385 RDGMNLVSYEFVACQKAKKGVLVLSEFAGAGQSL--GAGALLVNPWNITEVSSAIKEALNM---SDEERETRHRHNFQYV 459 (797)
T ss_pred ccccCcchhhHheeecCCCCCEEeeCCcCchhhh--cCCeEEECCCCHHHHHHHHHHHHhC---CHHHHHHHHHHHHHhh
Confidence 99999999999999999 9999988888865 55789986 799999999999995 5777777777777877
Q ss_pred cccchHHHHHHHHHH
Q 011969 449 LSARWATEWEEHAKP 463 (474)
Q Consensus 449 ~~~~w~~~~~~~~~~ 463 (474)
.+++|. .|.+.+..
T Consensus 460 ~~~~~~-~Wa~~fl~ 473 (797)
T PLN03063 460 KTHSAQ-KWADDFMS 473 (797)
T ss_pred hhCCHH-HHHHHHHH
Confidence 778876 46554433
|
|
| >COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.74 E-value=3.2e-15 Score=145.34 Aligned_cols=280 Identities=24% Similarity=0.302 Sum_probs=190.6
Q ss_pred CCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCC-chHHH-HHHHHHHHHhhhcCEEEEeCHHHHH
Q 011969 102 PDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRR-SHFVS-IYRWIEKYYGKMANGCLCVTQAMQH 179 (474)
Q Consensus 102 ~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~-~~~~~-~~~~~e~~~~~~ad~vi~vS~~~~~ 179 (474)
+|+++.+.....+..............+.+...|.............. ..... ............++.+++.+.....
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (381)
T COG0438 84 YDIIHAHSLLLAPGGLLALLLLKLLGIPLVVTLHGLIPRILLLPRLLLLLGLLRLLLKRLKKALRLLADRVIAVSPALKE 163 (381)
T ss_pred cceeeccccccccchhHHHhhccccCCcEEEeecCCcccccccccchhhHHHHHHHHHHHHHhccccccEEEECCHHHHH
Confidence 588888765433321123334445567888888887421110000111 11111 1111122221247888999988866
Q ss_pred HHHHHhCC-ceEEEeCCCC-CCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhcccccccccCCC
Q 011969 180 ELAQNWGI-KATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKPN 257 (474)
Q Consensus 180 ~l~~~~~~-~~~vi~n~~~-~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (474)
.+...... +..+++++.. +.+.+. .. .+..+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~-------------------------------------~~~~~ 196 (381)
T COG0438 164 LLEALGVPNKIVVIPNGIDTEKFAPA----------RI-------------------------------------GLLPE 196 (381)
T ss_pred HHHHhCCCCCceEecCCcCHHHcCcc----------cc-------------------------------------CCCcc
Confidence 66554433 3666666633 222221 00 01122
Q ss_pred C-CeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCC-hHHHHHH
Q 011969 258 R-PALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD-KESYEEK 335 (474)
Q Consensus 258 ~-~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~-~~~~~~~ 335 (474)
. ...++++|++.+.||++.+++++..+... .+++.++++|.++. .+.+.+.
T Consensus 197 ~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~---------------------------~~~~~~~~~g~~~~~~~~~~~~ 249 (381)
T COG0438 197 GGKFVVLYVGRLDPEKGLDLLIEAAAKLKKR---------------------------GPDIKLVIVGDGPERREELEKL 249 (381)
T ss_pred cCceEEEEeeccChhcCHHHHHHHHHHhhhh---------------------------cCCeEEEEEcCCCccHHHHHHH
Confidence 2 24899999999999999999999999773 45589999999987 3667778
Q ss_pred HHHcCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecccccccccccCCcEEEeC
Q 011969 336 IRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFS 414 (474)
Q Consensus 336 ~~~l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~~~~e~v~~~~~G~l~~ 414 (474)
+++++. ++|.|.|. ++.+++..+++.||++++ |+..|++|+.++|||++|+|||+++.++..+++.++.+|+++.
T Consensus 250 ~~~~~~~~~v~~~g~-~~~~~~~~~~~~~~~~v~---ps~~e~~~~~~~Ea~a~g~pvi~~~~~~~~e~~~~~~~g~~~~ 325 (381)
T COG0438 250 AKKLGLEDNVKFLGY-VPDEELAELLASADVFVL---PSLSEGFGLVLLEAMAAGTPVIASDVGGIPEVVEDGETGLLVP 325 (381)
T ss_pred HHHhCCCCcEEEecc-cCHHHHHHHHHhCCEEEe---ccccccchHHHHHHHhcCCcEEECCCCChHHHhcCCCceEecC
Confidence 888877 78999887 887889999999999999 5655999999999999999999999999999998887788665
Q ss_pred --CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc-cccchHHHHHHHHHH
Q 011969 415 --SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARWATEWEEHAKP 463 (474)
Q Consensus 415 --~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~~~~~~~ 463 (474)
+.+++++++..++++ ++.++.+.+.+.+.. ..++|+..++...+-
T Consensus 326 ~~~~~~~~~~i~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (381)
T COG0438 326 PGDVEELADALEQLLED----PELREELGEAARERVEEEFSWERIAEQLLEL 373 (381)
T ss_pred CCCHHHHHHHHHHHhcC----HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 489999999999985 566677776444433 578898877554433
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=3.3e-15 Score=167.63 Aligned_cols=161 Identities=12% Similarity=0.114 Sum_probs=121.0
Q ss_pred EEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCC----EEEEEEeCC-----CChHH
Q 011969 261 LVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPR----LLFIITGKG-----PDKES 331 (474)
Q Consensus 261 ~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~l~ivG~g-----~~~~~ 331 (474)
+++++||+.+.||+..+++|+..+.++ +|+ ++|+++|.+ ++.++
T Consensus 267 ~il~VgRl~~~Kgi~~~l~A~~~ll~~---------------------------~p~~~~~v~lv~v~~~sr~~~~~~~~ 319 (726)
T PRK14501 267 IILSIDRLDYTKGIPRRLLAFERFLEK---------------------------NPEWRGKVRLVQVAVPSRTGVPQYQE 319 (726)
T ss_pred EEEEecCcccccCHHHHHHHHHHHHHh---------------------------CccccCCEEEEEEecCCCcchHHHHH
Confidence 899999999999999999999988663 554 789888733 33344
Q ss_pred HHHHHHHc----C-------CCcE-EEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhc-----CCcEEE
Q 011969 332 YEEKIRRL----R-------LKRV-AFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGC-----GLPVCA 394 (474)
Q Consensus 332 ~~~~~~~l----~-------l~~V-~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~-----G~PVia 394 (474)
+++.++++ + ...| .|.|. ++.+++..+|+.||++++ +|..||||++++||||| |.||++
T Consensus 320 l~~~~~~~v~~in~~~~~~~~~pv~~~~~~-~~~~~l~~ly~~aDv~v~---~S~~EG~~lv~~Eama~~~~~~g~~vls 395 (726)
T PRK14501 320 MKREIDELVGRINGEFGTVDWTPIHYFYRS-LPFEELVALYRAADVALV---TPLRDGMNLVAKEYVASRTDGDGVLILS 395 (726)
T ss_pred HHHHHHHHHHHHHhhcCCCCcceEEEEeCC-CCHHHHHHHHHhccEEEe---cccccccCcccceEEEEcCCCCceEEEe
Confidence 54444443 1 1124 45555 999999999999999999 78899999999999999 456777
Q ss_pred ecccccccccccCCcEEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHH
Q 011969 395 VSYSCIEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEE 459 (474)
Q Consensus 395 ~~~~~~~e~v~~~~~G~l~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~ 459 (474)
...|+..+++ .|++++ |+++++++|.+++.. +.+++++..+.+++...+++|..-.++
T Consensus 396 ~~~G~~~~l~----~~llv~P~d~~~la~ai~~~l~~---~~~e~~~r~~~~~~~v~~~~~~~w~~~ 455 (726)
T PRK14501 396 EMAGAAAELA----EALLVNPNDIEGIAAAIKRALEM---PEEEQRERMQAMQERLRRYDVHKWASD 455 (726)
T ss_pred cccchhHHhC----cCeEECCCCHHHHHHHHHHHHcC---CHHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 6678888765 388886 799999999999985 344444444566666667777653344
|
|
| >PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.4e-16 Score=138.72 Aligned_cols=130 Identities=28% Similarity=0.442 Sum_probs=95.1
Q ss_pred EEEEEeecccCCCHHHHHH-HHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCChHHHHHHHHHc
Q 011969 261 LVVSSTSWTPDEDFGILLE-AALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRL 339 (474)
Q Consensus 261 ~i~~~G~l~~~k~~~~Li~-a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~~~l 339 (474)
.++|+|++.+.|+++.+++ ++..+.++ .|+++|.|+|.+++ ++++.
T Consensus 4 ~i~~~g~~~~~k~~~~li~~~~~~l~~~---------------------------~p~~~l~i~G~~~~--~l~~~---- 50 (135)
T PF13692_consen 4 YIGYLGRIRPDKGLEELIEAALERLKEK---------------------------HPDIELIIIGNGPD--ELKRL---- 50 (135)
T ss_dssp EEE--S-SSGGGTHHHHHH-HHHHHHHH---------------------------STTEEEEEECESS---HHCCH----
T ss_pred cccccccccccccccchhhhHHHHHHHH---------------------------CcCEEEEEEeCCHH--HHHHh----
Confidence 7899999999999999999 99999874 78999999999876 23333
Q ss_pred CCCcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecccccccccccCCcEEEeC-CHHH
Q 011969 340 RLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFS-SSSE 418 (474)
Q Consensus 340 ~l~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~~~~e~v~~~~~G~l~~-~~~~ 418 (474)
..++|.|.|. + +++..+++.||++++|. ..++++|.|++|||++|+|||+++. +..+++.....|.++. |+++
T Consensus 51 ~~~~v~~~g~-~--~e~~~~l~~~dv~l~p~--~~~~~~~~k~~e~~~~G~pvi~~~~-~~~~~~~~~~~~~~~~~~~~~ 124 (135)
T PF13692_consen 51 RRPNVRFHGF-V--EELPEILAAADVGLIPS--RFNEGFPNKLLEAMAAGKPVIASDN-GAEGIVEEDGCGVLVANDPEE 124 (135)
T ss_dssp HHCTEEEE-S----HHHHHHHHC-SEEEE-B--SS-SCC-HHHHHHHCTT--EEEEHH-HCHCHS---SEEEE-TT-HHH
T ss_pred cCCCEEEcCC-H--HHHHHHHHhCCEEEEEe--eCCCcCcHHHHHHHHhCCCEEECCc-chhhheeecCCeEEECCCHHH
Confidence 1259999998 6 68999999999999963 2455899999999999999999998 5677776566666654 7999
Q ss_pred HHHHHHHHHhC
Q 011969 419 LADQLLMLFKG 429 (474)
Q Consensus 419 la~~i~~l~~~ 429 (474)
++++|.+++++
T Consensus 125 l~~~i~~l~~d 135 (135)
T PF13692_consen 125 LAEAIERLLND 135 (135)
T ss_dssp HHHHHHHHHH-
T ss_pred HHHHHHHHhcC
Confidence 99999999873
|
|
| >TIGR00215 lpxB lipid-A-disaccharide synthase | Back alignment and domain information |
|---|
Probab=99.65 E-value=2.8e-14 Score=148.92 Aligned_cols=330 Identities=14% Similarity=0.085 Sum_probs=191.8
Q ss_pred eEEEEEeCCCCCCchHHHHHHHHHhhCCCeEEEEecCCCCCCcceeccCCeEEEEeecCCCCCCCCCchhHHHHHHHHHH
Q 011969 6 RACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPL 85 (474)
Q Consensus 6 ~~~i~~~~~~g~~~r~~~~a~~l~~~~g~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (474)
+++| ..|+-||.---...+.+|.++ +.++.+++.++......-.+ .+++++.++ ..++....+.+..+.+.+
T Consensus 7 ki~i-~aGgtsGhi~paal~~~l~~~-~~~~~~~g~gg~~m~~~g~~-~~~~~~~l~-----v~G~~~~l~~~~~~~~~~ 78 (385)
T TIGR00215 7 TIAL-VAGEASGDILGAGLRQQLKEH-YPNARFIGVAGPRMAAEGCE-VLYSMEELS-----VMGLREVLGRLGRLLKIR 78 (385)
T ss_pred eEEE-EeCCccHHHHHHHHHHHHHhc-CCCcEEEEEccHHHHhCcCc-cccChHHhh-----hccHHHHHHHHHHHHHHH
Confidence 3443 344444422222556667665 89999999775432211111 124444444 111212222222222222
Q ss_pred HHHHHHHHHHhhhcCCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhh
Q 011969 86 IQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGK 165 (474)
Q Consensus 86 ~~~~~~~~~~~~~~~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 165 (474)
.+ +...+ +..+||+|++.+.++++..+ + .+++..|+|+++++. ... . ... . +-.+.+.+
T Consensus 79 ~~----~~~~l-~~~kPd~vi~~g~~~~~~~~-a-~aa~~~gip~v~~i~-P~~--w--aw~--~-------~~~r~l~~ 137 (385)
T TIGR00215 79 KE----VVQLA-KQAKPDLLVGIDAPDFNLTK-E-LKKKDPGIKIIYYIS-PQV--W--AWR--K-------WRAKKIEK 137 (385)
T ss_pred HH----HHHHH-HhcCCCEEEEeCCCCccHHH-H-HHHhhCCCCEEEEeC-CcH--h--hcC--c-------chHHHHHH
Confidence 22 12222 33799999999866666542 2 345567899887642 100 0 001 1 11445667
Q ss_pred hcCEEEEeCHHHHHHHHHHhCCceEEEeCCCCCCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhh
Q 011969 166 MANGCLCVTQAMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFT 245 (474)
Q Consensus 166 ~ad~vi~vS~~~~~~l~~~~~~~~~vi~n~~~~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (474)
.+|.++|.++..++.+.+ .+.++.++.|+..+.+.+.. ..+.+.+++++
T Consensus 138 ~~d~v~~~~~~e~~~~~~-~g~~~~~vGnPv~~~~~~~~-~~~~~~r~~lg----------------------------- 186 (385)
T TIGR00215 138 ATDFLLAILPFEKAFYQK-KNVPCRFVGHPLLDAIPLYK-PDRKSAREKLG----------------------------- 186 (385)
T ss_pred HHhHhhccCCCcHHHHHh-cCCCEEEECCchhhhccccC-CCHHHHHHHcC-----------------------------
Confidence 899999999999888765 47777776665322222110 12233455555
Q ss_pred cccccccccCCCCCeEEEEEe-eccc-CCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEE
Q 011969 246 SLAGIDVFLKPNRPALVVSST-SWTP-DEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIIT 323 (474)
Q Consensus 246 ~~~~~~~~~~~~~~~~i~~~G-~l~~-~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iv 323 (474)
++++.+.+++..| +..+ .++...+++++..+.++ .|++++++.
T Consensus 187 --------l~~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~---------------------------~p~~~~vi~ 231 (385)
T TIGR00215 187 --------IDHNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQ---------------------------EPDLRRVLP 231 (385)
T ss_pred --------CCCCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHh---------------------------CCCeEEEEE
Confidence 3455665555555 4444 68899999999988763 688888665
Q ss_pred -eCCCChHHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEec-cccc
Q 011969 324 -GKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS-YSCI 400 (474)
Q Consensus 324 -G~g~~~~~~~~~~~~l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~-~~~~ 400 (474)
+++...+.+++..+.++. .+|.+.+. +...+|+.||++|+ +| |...+|+|+||+|+|.+. .+.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~-----~~~~~l~aADl~V~---~S-----Gt~tlEa~a~G~P~Vv~yk~~pl 298 (385)
T TIGR00215 232 VVNFKRRLQFEQIKAEYGPDLQLHLIDG-----DARKAMFAADAALL---AS-----GTAALEAALIKTPMVVGYRMKPL 298 (385)
T ss_pred eCCchhHHHHHHHHHHhCCCCcEEEECc-----hHHHHHHhCCEEee---cC-----CHHHHHHHHcCCCEEEEEcCCHH
Confidence 455556667777777665 35666532 56789999999999 44 557779999999999882 1111
Q ss_pred ----------------ccccccCCcEEE-e-C--CHHHHHHHHHHHHhCCCCCH----HHHHHHHHHHHHh
Q 011969 401 ----------------EELVKVDKNGLL-F-S--SSSELADQLLMLFKGFPDDS----DVLKKLRNGTLEM 447 (474)
Q Consensus 401 ----------------~e~v~~~~~G~l-~-~--~~~~la~~i~~l~~~~~~~~----~~~~~~~~~~~~~ 447 (474)
..++.+.+..-. . + +++.+++.+.+++++ + +.++++++...+.
T Consensus 299 ~~~~~~~~~~~~~~~~~nil~~~~~~pel~q~~~~~~~l~~~~~~ll~~----~~~~~~~~~~~~~~~~~~ 365 (385)
T TIGR00215 299 TFLIARRLVKTDYISLPNILANRLLVPELLQEECTPHPLAIALLLLLEN----GLKAYKEMHRERQFFEEL 365 (385)
T ss_pred HHHHHHHHHcCCeeeccHHhcCCccchhhcCCCCCHHHHHHHHHHHhcC----CcccHHHHHHHHHHHHHH
Confidence 122221111111 1 2 588999999999985 6 6677777766654
|
Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA |
| >TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.3e-13 Score=148.66 Aligned_cols=160 Identities=19% Similarity=0.199 Sum_probs=136.1
Q ss_pred eEEEEEe--ecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCCh---HHHHH
Q 011969 260 ALVVSST--SWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK---ESYEE 334 (474)
Q Consensus 260 ~~i~~~G--~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~---~~~~~ 334 (474)
..+++++ |+ +.|.++.+|+++..+.+. .|+++|.+.|.|.+. +.+++
T Consensus 320 ~~~I~v~idrL-~ek~~~~~I~av~~~~~~---------------------------~p~~~L~~~gy~~~~~~~~~l~~ 371 (519)
T TIGR03713 320 ETEIGFWIDGL-SDEELQQILQQLLQYILK---------------------------NPDYELKILTYNNDNDITQLLED 371 (519)
T ss_pred ceEEEEEcCCC-ChHHHHHHHHHHHHHHhh---------------------------CCCeEEEEEEecCchhHHHHHHH
Confidence 3788888 99 999999999999998773 799999999988643 45555
Q ss_pred HHHHcCC------------------------------CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHH
Q 011969 335 KIRRLRL------------------------------KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVD 384 (474)
Q Consensus 335 ~~~~l~l------------------------------~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~E 384 (474)
.++++++ .+|.|.|. .+..++...|+.+.++|. .|..++|+ ..+|
T Consensus 372 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~gy-~~e~dl~~~~~~arl~id---~s~~eg~~-~~ie 446 (519)
T TIGR03713 372 ILEQINEEYNQDKNFFSLSEQDENQPILQTDEEQKEKERIAFTTL-TNEEDLISALDKLRLIID---LSKEPDLY-TQIS 446 (519)
T ss_pred HHHHHHhhhchhhhccccchhhhhhhcccchhhcccccEEEEEec-CCHHHHHHHHhhheEEEE---CCCCCChH-HHHH
Confidence 5565533 38999987 555699999999999999 78899999 9999
Q ss_pred HHhcCCcEEEecccccccccccCCcEEEeCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHH
Q 011969 385 MFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEE 459 (474)
Q Consensus 385 ama~G~PVia~~~~~~~e~v~~~~~G~l~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~ 459 (474)
|++.|+|+| + -+..++|+++.||+++++.++|+++|..++.+ ++..+++...+.+.+.+|+=+.-|++
T Consensus 447 AiS~GiPqI--n-yg~~~~V~d~~NG~li~d~~~l~~al~~~L~~----~~~wn~~~~~sy~~~~~yS~~~i~~k 514 (519)
T TIGR03713 447 GISAGIPQI--N-KVETDYVEHNKNGYIIDDISELLKALDYYLDN----LKNWNYSLAYSIKLIDDYSSENIIER 514 (519)
T ss_pred HHHcCCCee--e-cCCceeeEcCCCcEEeCCHHHHHHHHHHHHhC----HHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 999999999 3 34589999999999999999999999999995 88999999999988877776655543
|
This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Probab=99.53 E-value=3.8e-12 Score=135.82 Aligned_cols=135 Identities=13% Similarity=0.097 Sum_probs=112.2
Q ss_pred EEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCC----CEEEEEEeCCC-----C---
Q 011969 261 LVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYP----RLLFIITGKGP-----D--- 328 (474)
Q Consensus 261 ~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~ivG~g~-----~--- 328 (474)
+|++++|+.+.||+...++|+..+.++ +| +++|+++|.+. +
T Consensus 287 iIl~VDRLDy~KGI~~kl~Afe~~L~~---------------------------~Pe~~gkv~Lvqi~~psr~~v~~y~~ 339 (487)
T TIGR02398 287 LILSAERVDYTKGILEKLNAYERLLER---------------------------RPELLGKVTLVTACVPAASGMTIYDE 339 (487)
T ss_pred EEEEecccccccCHHHHHHHHHHHHHh---------------------------CccccCceEEEEEeCCCcccchHHHH
Confidence 899999999999999999999998763 56 47999998763 1
Q ss_pred -hHHHHHHHHHc-------CC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCC----cEEEe
Q 011969 329 -KESYEEKIRRL-------RL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGL----PVCAV 395 (474)
Q Consensus 329 -~~~~~~~~~~l-------~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~----PVia~ 395 (474)
+.++++.+.+. +. +-+.|.+. +|.+++..+|+.||+++. ++..+|+.++..||+||+. |+|.|
T Consensus 340 l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~-v~~~el~alYr~ADV~lv---T~lrDGmNLVa~Eyva~~~~~~GvLILS 415 (487)
T TIGR02398 340 LQGQIEQAVGRINGRFARIGWTPLQFFTRS-LPYEEVSAWFAMADVMWI---TPLRDGLNLVAKEYVAAQGLLDGVLVLS 415 (487)
T ss_pred HHHHHHHHHHHHhhccCCCCCccEEEEcCC-CCHHHHHHHHHhCCEEEE---CccccccCcchhhHHhhhcCCCCCEEEe
Confidence 24455555554 34 34566666 999999999999999999 8999999999999999998 99999
Q ss_pred cccccccccccCCcEEEeC--CHHHHHHHHHHHHhC
Q 011969 396 SYSCIEELVKVDKNGLLFS--SSSELADQLLMLFKG 429 (474)
Q Consensus 396 ~~~~~~e~v~~~~~G~l~~--~~~~la~~i~~l~~~ 429 (474)
..+|..+.+ ..+++++ |+++++++|...+..
T Consensus 416 efaGaa~~l---~~AllVNP~d~~~~A~ai~~AL~m 448 (487)
T TIGR02398 416 EFAGAAVEL---KGALLTNPYDPVRMDETIYVALAM 448 (487)
T ss_pred ccccchhhc---CCCEEECCCCHHHHHHHHHHHHcC
Confidence 988888665 3467886 899999999999997
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. |
| >COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.50 E-value=7e-11 Score=121.92 Aligned_cols=324 Identities=19% Similarity=0.183 Sum_probs=186.7
Q ss_pred EEEEEeCCCCCCchHHHHHHHHHhhCCCe-EEEEecCCCCCCcceeccCCeEEEEeecCCCCCCCCCchhHHHHHHHHHH
Q 011969 7 ACVVVLGDLGRSPRMQYQALSLARQMSLE-VDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPL 85 (474)
Q Consensus 7 ~~i~~~~~~g~~~r~~~~a~~l~~~~g~e-V~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (474)
+.+...|.=|+-.--.-.+..|.++ |++ |.++..... .........+++++.++. ...+.... ...+...++.+
T Consensus 3 ivl~~gGTGGHv~pAlAl~~~l~~~-g~~~v~~~~~~~~-~e~~l~~~~~~~~~~I~~--~~~~~~~~-~~~~~~~~~~~ 77 (357)
T COG0707 3 IVLTAGGTGGHVFPALALAEELAKR-GWEQVIVLGTGDG-LEAFLVKQYGIEFELIPS--GGLRRKGS-LKLLKAPFKLL 77 (357)
T ss_pred EEEEeCCCccchhHHHHHHHHHHhh-CccEEEEeccccc-ceeeeccccCceEEEEec--ccccccCc-HHHHHHHHHHH
Confidence 4444444444444444556777776 995 555543332 233444455899999983 22222111 11222223332
Q ss_pred HHHHHHHHHHhhhcCCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhh
Q 011969 86 IQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGK 165 (474)
Q Consensus 86 ~~~~~~~~~~~~~~~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 165 (474)
....... .++ +..+||+|+.... +++.+ +.++++..++|++++-.|. ..+. ..+...+
T Consensus 78 ~~~~~a~-~il-~~~kPd~vig~Gg--yvs~P-~~~Aa~~~~iPv~ihEqn~-------~~G~----------ank~~~~ 135 (357)
T COG0707 78 KGVLQAR-KIL-KKLKPDVVIGTGG--YVSGP-VGIAAKLLGIPVIIHEQNA-------VPGL----------ANKILSK 135 (357)
T ss_pred HHHHHHH-HHH-HHcCCCEEEecCC--ccccH-HHHHHHhCCCCEEEEecCC-------Ccch----------hHHHhHH
Confidence 2221111 222 3489999998664 33332 4566778889999988887 2231 2234445
Q ss_pred hcCEEEEeCHHHHHHHHHHhC-CceEEEeCCCCCCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhh
Q 011969 166 MANGCLCVTQAMQHELAQNWG-IKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIF 244 (474)
Q Consensus 166 ~ad~vi~vS~~~~~~l~~~~~-~~~~vi~n~~~~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (474)
.|+.|.+.-.... ...+ .++.+.-+.....|...+. ...+ ..
T Consensus 136 ~a~~V~~~f~~~~----~~~~~~~~~~tG~Pvr~~~~~~~~-~~~~--~~------------------------------ 178 (357)
T COG0707 136 FAKKVASAFPKLE----AGVKPENVVVTGIPVRPEFEELPA-AEVR--KD------------------------------ 178 (357)
T ss_pred hhceeeecccccc----ccCCCCceEEecCcccHHhhccch-hhhh--hh------------------------------
Confidence 6676666544311 1111 1133333332222221110 0000 00
Q ss_pred hcccccccccCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEE-EEE
Q 011969 245 TSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLF-IIT 323 (474)
Q Consensus 245 ~~~~~~~~~~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~iv 323 (474)
...+.+.++++.|+.+-.. +-+++..+... ...++.+ .++
T Consensus 179 ---------~~~~~~~ilV~GGS~Ga~~----ln~~v~~~~~~--------------------------l~~~~~v~~~~ 219 (357)
T COG0707 179 ---------GRLDKKTILVTGGSQGAKA----LNDLVPEALAK--------------------------LANRIQVIHQT 219 (357)
T ss_pred ---------ccCCCcEEEEECCcchhHH----HHHHHHHHHHH--------------------------hhhCeEEEEEc
Confidence 1125666888888865544 44444333321 0113555 555
Q ss_pred eCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEeccccc---
Q 011969 324 GKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI--- 400 (474)
Q Consensus 324 G~g~~~~~~~~~~~~l~l~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~~~--- 400 (474)
|.+. .+++.+...+++. +...++ .+++..+|+.||++++ ..| ++++.|..++|+|+|-...+..
T Consensus 220 G~~~-~~~~~~~~~~~~~--~~v~~f---~~dm~~~~~~ADLvIs----RaG---a~Ti~E~~a~g~P~IliP~p~~~~~ 286 (357)
T COG0707 220 GKND-LEELKSAYNELGV--VRVLPF---IDDMAALLAAADLVIS----RAG---ALTIAELLALGVPAILVPYPPGADG 286 (357)
T ss_pred Ccch-HHHHHHHHhhcCc--EEEeeH---HhhHHHHHHhccEEEe----CCc---ccHHHHHHHhCCCEEEeCCCCCccc
Confidence 5544 5666666666664 888888 7889999999999998 333 4599999999999999876544
Q ss_pred -----ccccccCCcEEEeC----CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccc
Q 011969 401 -----EELVKVDKNGLLFS----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLS 450 (474)
Q Consensus 401 -----~e~v~~~~~G~l~~----~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~ 450 (474)
+..+.+.+.|.++. +++.+.+.|..++++ ++.+++|.+++.+....
T Consensus 287 ~Q~~NA~~l~~~gaa~~i~~~~lt~~~l~~~i~~l~~~----~~~l~~m~~~a~~~~~p 341 (357)
T COG0707 287 HQEYNAKFLEKAGAALVIRQSELTPEKLAELILRLLSN----PEKLKAMAENAKKLGKP 341 (357)
T ss_pred hHHHHHHHHHhCCCEEEeccccCCHHHHHHHHHHHhcC----HHHHHHHHHHHHhcCCC
Confidence 23455556677764 378999999999985 89999999999987633
|
|
| >PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.49 E-value=7.6e-11 Score=121.73 Aligned_cols=309 Identities=12% Similarity=0.112 Sum_probs=168.0
Q ss_pred ceEEEEEeCCCCCCchHHHHHHHHHhhCCCeEEEEecCCCCCCcceeccCCeEEEEeecCCCCCCCCCchhHHHHHHHHH
Q 011969 5 GRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKP 84 (474)
Q Consensus 5 ~~~~i~~~~~~g~~~r~~~~a~~l~~~~g~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (474)
|++++...|.=|+-..-.-.+..|.++ ||+|.+++..... ..++....|+.++.++ ........ ..+.+..+.+.
T Consensus 2 ~~i~~~~GGTGGHi~Pala~a~~l~~~-g~~v~~vg~~~~~-e~~l~~~~g~~~~~~~--~~~l~~~~-~~~~~~~~~~~ 76 (352)
T PRK12446 2 KKIVFTGGGSAGHVTPNLAIIPYLKED-NWDISYIGSHQGI-EKTIIEKENIPYYSIS--SGKLRRYF-DLKNIKDPFLV 76 (352)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHHHHhC-CCEEEEEECCCcc-ccccCcccCCcEEEEe--ccCcCCCc-hHHHHHHHHHH
Confidence 346666666544444444455666664 9999999955433 2344555578888887 22111110 12223333333
Q ss_pred HHHHHHHHHHHhhhcCCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHh
Q 011969 85 LIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYG 164 (474)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 164 (474)
+...+..+ .+. +..+||+|+.+.. ..+. .+.+++++.++|++++-.+.. .+ ...+.+.
T Consensus 77 ~~~~~~~~-~i~-~~~kPdvvi~~Gg--y~s~-p~~~aa~~~~~p~~i~e~n~~-------~g----------~~nr~~~ 134 (352)
T PRK12446 77 MKGVMDAY-VRI-RKLKPDVIFSKGG--FVSV-PVVIGGWLNRVPVLLHESDMT-------PG----------LANKIAL 134 (352)
T ss_pred HHHHHHHH-HHH-HhcCCCEEEecCc--hhhH-HHHHHHHHcCCCEEEECCCCC-------cc----------HHHHHHH
Confidence 33322222 222 3489999999773 2232 245778889999887555541 11 2345567
Q ss_pred hhcCEEEEeCHHHHHHHHHHhCCceEEEeCCCCCCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhh
Q 011969 165 KMANGCLCVTQAMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIF 244 (474)
Q Consensus 165 ~~ad~vi~vS~~~~~~l~~~~~~~~~vi~n~~~~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (474)
+.|+.+++--+...+.+. ..++.+.=+...+.|... .+...++.++
T Consensus 135 ~~a~~v~~~f~~~~~~~~---~~k~~~tG~Pvr~~~~~~---~~~~~~~~~~---------------------------- 180 (352)
T PRK12446 135 RFASKIFVTFEEAAKHLP---KEKVIYTGSPVREEVLKG---NREKGLAFLG---------------------------- 180 (352)
T ss_pred HhhCEEEEEccchhhhCC---CCCeEEECCcCCcccccc---cchHHHHhcC----------------------------
Confidence 788888765543332221 122322222222333211 1122223333
Q ss_pred hcccccccccCCCCCeEEEEEeecccCCCH-HHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEE-EE
Q 011969 245 TSLAGIDVFLKPNRPALVVSSTSWTPDEDF-GILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLF-II 322 (474)
Q Consensus 245 ~~~~~~~~~~~~~~~~~i~~~G~l~~~k~~-~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~i 322 (474)
+.+++|.++++.|+.+.. .+ +.+.+++..+. +++.+ ++
T Consensus 181 ---------l~~~~~~iLv~GGS~Ga~-~in~~~~~~l~~l~------------------------------~~~~vv~~ 220 (352)
T PRK12446 181 ---------FSRKKPVITIMGGSLGAK-KINETVREALPELL------------------------------LKYQIVHL 220 (352)
T ss_pred ---------CCCCCcEEEEECCccchH-HHHHHHHHHHHhhc------------------------------cCcEEEEE
Confidence 346677788888887643 33 22222333321 12444 45
Q ss_pred EeCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecccc---
Q 011969 323 TGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC--- 399 (474)
Q Consensus 323 vG~g~~~~~~~~~~~~l~l~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~~--- 399 (474)
+|... +++..... +++...++ + .++++.+|..||++|+ ..| ++++.|++++|+|.|......
T Consensus 221 ~G~~~----~~~~~~~~--~~~~~~~f-~-~~~m~~~~~~adlvIs----r~G---~~t~~E~~~~g~P~I~iP~~~~~~ 285 (352)
T PRK12446 221 CGKGN----LDDSLQNK--EGYRQFEY-V-HGELPDILAITDFVIS----RAG---SNAIFEFLTLQKPMLLIPLSKFAS 285 (352)
T ss_pred eCCch----HHHHHhhc--CCcEEecc-h-hhhHHHHHHhCCEEEE----CCC---hhHHHHHHHcCCCEEEEcCCCCCC
Confidence 66432 22222222 23444454 1 3689999999999997 223 458999999999999986431
Q ss_pred ------cccccccCCcEEEeC----CHHHHHHHHHHHHhC
Q 011969 400 ------IEELVKVDKNGLLFS----SSSELADQLLMLFKG 429 (474)
Q Consensus 400 ------~~e~v~~~~~G~l~~----~~~~la~~i~~l~~~ 429 (474)
..+.+.+.+.|..+. +++.+.+++..++++
T Consensus 286 ~~~Q~~Na~~l~~~g~~~~l~~~~~~~~~l~~~l~~ll~~ 325 (352)
T PRK12446 286 RGDQILNAESFERQGYASVLYEEDVTVNSLIKHVEELSHN 325 (352)
T ss_pred CchHHHHHHHHHHCCCEEEcchhcCCHHHHHHHHHHHHcC
Confidence 122444555666653 488999999999874
|
|
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=5e-10 Score=127.07 Aligned_cols=163 Identities=10% Similarity=0.152 Sum_probs=124.8
Q ss_pred EEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEE--EEEE-------eCCCChHH
Q 011969 261 LVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLL--FIIT-------GKGPDKES 331 (474)
Q Consensus 261 ~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~iv-------G~g~~~~~ 331 (474)
+|++++++.+.||+...++|+..+.++ +|+++ ++++ |++++.++
T Consensus 365 iIlgVDRLD~~KGI~~kL~AfE~fL~~---------------------------~Pe~r~kVVLvQIa~psr~~v~eY~~ 417 (934)
T PLN03064 365 VMLGVDRLDMIKGIPQKILAFEKFLEE---------------------------NPEWRDKVVLLQIAVPTRTDVPEYQK 417 (934)
T ss_pred EEEEeeccccccCHHHHHHHHHHHHHh---------------------------CccccCCEEEEEEcCCCCCCcHHHHH
Confidence 899999999999999999999987663 66653 5555 45555444
Q ss_pred HHHHH----HHcC----C---CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhc-----CCcEEEe
Q 011969 332 YEEKI----RRLR----L---KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGC-----GLPVCAV 395 (474)
Q Consensus 332 ~~~~~----~~l~----l---~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~-----G~PVia~ 395 (474)
+++.+ .+.+ - .-|.++...++.+++..+|+.||++|+ +|..+|++++..|||+| |.+|+ +
T Consensus 418 l~~~V~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~ADV~lv---TslrDGmNLva~Eyva~~~~~~GvLIL-S 493 (934)
T PLN03064 418 LTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALV---TSLRDGMNLVSYEFVACQDSKKGVLIL-S 493 (934)
T ss_pred HHHHHHHHHHHHhhhccCCCcceEEEeccCCCHHHHHHHHHhCCEEEe---CccccccCchHHHHHHhhcCCCCCeEE-e
Confidence 44333 3322 1 126666665899999999999999999 89999999999999999 45555 7
Q ss_pred cccccccccccCCcEEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHH
Q 011969 396 SYSCIEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEH 460 (474)
Q Consensus 396 ~~~~~~e~v~~~~~G~l~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~ 460 (474)
..+|.++.+ +..+++++ |+++++++|...+.. +++++++..+..+++...++|. .|-+.
T Consensus 494 EfaGaa~~L--~~~AllVNP~D~~~vA~AI~~AL~M---~~~Er~~r~~~~~~~V~~~d~~-~Wa~~ 554 (934)
T PLN03064 494 EFAGAAQSL--GAGAILVNPWNITEVAASIAQALNM---PEEEREKRHRHNFMHVTTHTAQ-EWAET 554 (934)
T ss_pred CCCchHHHh--CCceEEECCCCHHHHHHHHHHHHhC---CHHHHHHHHHHHHhhcccCCHH-HHHHH
Confidence 877777766 44678886 799999999999985 5788888888888887777764 36443
|
|
| >PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A | Back alignment and domain information |
|---|
Probab=99.36 E-value=5e-12 Score=112.30 Aligned_cols=151 Identities=21% Similarity=0.277 Sum_probs=85.6
Q ss_pred hHHHHHHHHHhhCCCeEEEEecCCCCCCcceeccCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhc
Q 011969 20 RMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKI 99 (474)
Q Consensus 20 r~~~~a~~l~~~~g~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (474)
.+...+.+|+++ ||+|+|++........ .....++.+++++.... .........+..+.+. + ..+.
T Consensus 6 ~~~~l~~~L~~~-G~~V~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-------l---~~~~ 71 (160)
T PF13579_consen 6 YVRELARALAAR-GHEVTVVTPQPDPEDD-EEEEDGVRVHRLPLPRR--PWPLRLLRFLRRLRRL-------L---AARR 71 (160)
T ss_dssp HHHHHHHHHHHT-T-EEEEEEE---GGG--SEEETTEEEEEE--S-S--SSGGGHCCHHHHHHHH-------C---HHCT
T ss_pred HHHHHHHHHHHC-CCEEEEEecCCCCccc-ccccCCceEEeccCCcc--chhhhhHHHHHHHHHH-------H---hhhc
Confidence 455677888887 9999999977655432 24567999999983221 1111111111111111 1 1234
Q ss_pred CCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCC-CchHHHHHHHHHHHHhhhcCEEEEeCHHHH
Q 011969 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGR-RSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178 (474)
Q Consensus 100 ~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~-~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~ 178 (474)
.+||+||++++ ....++.++++..++|+|+++|+... .. ......+++++++..++.||.++++|+.++
T Consensus 72 ~~~Dvv~~~~~---~~~~~~~~~~~~~~~p~v~~~h~~~~-------~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~ 141 (160)
T PF13579_consen 72 ERPDVVHAHSP---TAGLVAALARRRRGIPLVVTVHGTLF-------RRGSRWKRRLYRWLERRLLRRADRVIVVSEAMR 141 (160)
T ss_dssp ---SEEEEEHH---HHHHHHHHHHHHHT--EEEE-SS-T-------------HHHHHHHHHHHHHHHH-SEEEESSHHHH
T ss_pred cCCeEEEeccc---chhHHHHHHHHccCCcEEEEECCCch-------hhccchhhHHHHHHHHHHHhcCCEEEECCHHHH
Confidence 89999999993 34445666666779999999998631 22 334456778999999999999999999999
Q ss_pred HHHHHHhCCc---eEEEeCC
Q 011969 179 HELAQNWGIK---ATVLYDQ 195 (474)
Q Consensus 179 ~~l~~~~~~~---~~vi~n~ 195 (474)
+.+.+ ++.+ +.++|||
T Consensus 142 ~~l~~-~g~~~~ri~vipnG 160 (160)
T PF13579_consen 142 RYLRR-YGVPPDRIHVIPNG 160 (160)
T ss_dssp HHHHH-H---GGGEEE----
T ss_pred HHHHH-hCCCCCcEEEeCcC
Confidence 99998 6654 8999986
|
|
| >TIGR02094 more_P_ylases alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=99.30 E-value=3.6e-09 Score=116.11 Aligned_cols=183 Identities=11% Similarity=0.026 Sum_probs=134.3
Q ss_pred cCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCCh----
Q 011969 254 LKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK---- 329 (474)
Q Consensus 254 ~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~---- 329 (474)
+.++.+ ++++++|++..||.+++++++..+.+. .+.+ ...+.|++.|++...
T Consensus 385 ~dpd~~-~ig~v~Rl~~yKr~dLil~~i~~l~~i--------------------~~~~---~~pvq~V~~Gka~p~d~~g 440 (601)
T TIGR02094 385 LDPDVL-TIGFARRFATYKRADLIFRDLERLARI--------------------LNNP---ERPVQIVFAGKAHPADGEG 440 (601)
T ss_pred cCCCCc-EEEEEEcchhhhhHHHHHHHHHHHHHH--------------------hhCC---CCCeEEEEEEecCcccchH
Confidence 445666 899999999999999999998887641 0000 135899999988532
Q ss_pred ----HHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCC-CCCCchHHHHHHhcCCcEEEecccccccc
Q 011969 330 ----ESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS-GLDLPMKVVDMFGCGLPVCAVSYSCIEEL 403 (474)
Q Consensus 330 ----~~~~~~~~~l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~-~e~~p~kv~Eama~G~PVia~~~~~~~e~ 403 (474)
+.+.+.+++... ++|.|+.. .+.+-...++..||++++- |+. .|.+|+.=+=||..|.+.+++--|...|.
T Consensus 441 k~~i~~i~~la~~~~~~~kv~f~~~-Yd~~lA~~i~aG~Dv~L~~--Psr~~EacGtsqMka~~nGgL~~sv~DG~~~E~ 517 (601)
T TIGR02094 441 KEIIQRIVEFSKRPEFRGRIVFLEN-YDINLARYLVSGVDVWLNN--PRRPLEASGTSGMKAAMNGVLNLSILDGWWGEG 517 (601)
T ss_pred HHHHHHHHHHHhcccCCCCEEEEcC-CCHHHHHHHhhhheeEEeC--CCCCcCCchHHHHHHHHcCCceeecccCccccc
Confidence 334444444223 48998876 6777888899999999992 465 79999999999999999999987777776
Q ss_pred cccCCcEEEeC--------------CHHHHHHHHHHHH-hCCCCC-----HHHHHHHHHHHHHh-ccccchHHHHHHHHH
Q 011969 404 VKVDKNGLLFS--------------SSSELADQLLMLF-KGFPDD-----SDVLKKLRNGTLEM-GLSARWATEWEEHAK 462 (474)
Q Consensus 404 v~~~~~G~l~~--------------~~~~la~~i~~l~-~~~~~~-----~~~~~~~~~~~~~~-~~~~~w~~~~~~~~~ 462 (474)
. ++.||+.+. |.++|.++|++.+ ..|-++ |....++.++++.. ...++|..+.++..+
T Consensus 518 ~-~~~nGf~f~~~~~~~~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~ 596 (601)
T TIGR02094 518 Y-DGDNGWAIGDGEEYDDEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVD 596 (601)
T ss_pred C-CCCcEEEECCCccccccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHH
Confidence 6 678999986 3778888886644 322222 45678888888763 245888887777666
Q ss_pred HH
Q 011969 463 PL 464 (474)
Q Consensus 463 ~~ 464 (474)
.+
T Consensus 597 ~y 598 (601)
T TIGR02094 597 KF 598 (601)
T ss_pred Hh
Confidence 54
|
This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343. |
| >TIGR03492 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=99.27 E-value=3.7e-09 Score=110.95 Aligned_cols=247 Identities=15% Similarity=0.174 Sum_probs=150.4
Q ss_pred CCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEE-EecCchhhhhhhccCCCchHHHHHH---------H-HHHHHhhhcC
Q 011969 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIV-DWHNFGYTLLSLSLGRRSHFVSIYR---------W-IEKYYGKMAN 168 (474)
Q Consensus 100 ~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~h~~~~~~~~~~~~~~~~~~~~~~---------~-~e~~~~~~ad 168 (474)
.+||+|++..-.. ..+++++.|+|+++ -.|.-.+... .+...+....+. | -.+...+.|+
T Consensus 92 ~~p~~v~~~Gg~v------~~~aA~~~~~p~~~~~~~esn~~~~---~~~~~~~~~~~~~~~G~~~~p~e~n~l~~~~a~ 162 (396)
T TIGR03492 92 KKGDLIVAVGDIV------PLLFAWLSGKPYAFVGTAKSDYYWE---SGPRRSPSDEYHRLEGSLYLPWERWLMRSRRCL 162 (396)
T ss_pred hcCCEEEEECcHH------HHHHHHHcCCCceEEEeeccceeec---CCCCCccchhhhccCCCccCHHHHHHhhchhhC
Confidence 4899999887321 44556777888766 3343321100 000001110010 1 1355557899
Q ss_pred EEEEeCHHHHHHHHHHhCCceEEEeCCCCCCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhccc
Q 011969 169 GCLCVTQAMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLA 248 (474)
Q Consensus 169 ~vi~vS~~~~~~l~~~~~~~~~vi~n~~~~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (474)
.+++-.+...+.+.+ .|.++.++=|..-+...+... .
T Consensus 163 ~v~~~~~~t~~~l~~-~g~k~~~vGnPv~d~l~~~~~---~--------------------------------------- 199 (396)
T TIGR03492 163 AVFVRDRLTARDLRR-QGVRASYLGNPMMDGLEPPER---K--------------------------------------- 199 (396)
T ss_pred EEeCCCHHHHHHHHH-CCCeEEEeCcCHHhcCccccc---c---------------------------------------
Confidence 999999998888876 577666654442222211100 0
Q ss_pred ccccccCCCCCeEEEEEeecccC--CCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEe-C
Q 011969 249 GIDVFLKPNRPALVVSSTSWTPD--EDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITG-K 325 (474)
Q Consensus 249 ~~~~~~~~~~~~~i~~~G~l~~~--k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG-~ 325 (474)
.+.++.+.+++..|+-..+ +++..+++++..+.+ . +++.+++.- +
T Consensus 200 ----~l~~~~~~lllLpGSR~ae~~~~lp~~l~al~~L~~---------------------------~-~~~~~v~~~~~ 247 (396)
T TIGR03492 200 ----PLLTGRFRIALLPGSRPPEAYRNLKLLLRALEALPD---------------------------S-QPFVFLAAIVP 247 (396)
T ss_pred ----ccCCCCCEEEEECCCCHHHHHccHHHHHHHHHHHhh---------------------------C-CCeEEEEEeCC
Confidence 1224455577777776433 567788889888754 2 567775543 4
Q ss_pred CCChHHHHHHHHHcCCC---------------cEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCC
Q 011969 326 GPDKESYEEKIRRLRLK---------------RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGL 390 (474)
Q Consensus 326 g~~~~~~~~~~~~l~l~---------------~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~ 390 (474)
+.+.+.+++..++.++. ++.+... ..++..+|+.||++|+ . .| ....|++++|+
T Consensus 248 ~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~v~~~---~~~~~~~l~~ADlvI~---r-SG----t~T~E~a~lg~ 316 (396)
T TIGR03492 248 SLSLEKLQAILEDLGWQLEGSSEDQTSLFQKGTLEVLLG---RGAFAEILHWADLGIA---M-AG----TATEQAVGLGK 316 (396)
T ss_pred CCCHHHHHHHHHhcCceecCCccccchhhccCceEEEec---hHhHHHHHHhCCEEEE---C-cC----HHHHHHHHhCC
Confidence 55667777766665542 2566544 5789999999999998 3 33 35699999999
Q ss_pred cEEEeccccc---cccccc-----CCcEEEeC-CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Q 011969 391 PVCAVSYSCI---EELVKV-----DKNGLLFS-SSSELADQLLMLFKGFPDDSDVLKKLRNGTL 445 (474)
Q Consensus 391 PVia~~~~~~---~e~v~~-----~~~G~l~~-~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~ 445 (474)
|+|.....+. ..+.+. +....+.+ +++.+++++..++++ ++.+++|.+++.
T Consensus 317 P~Ilip~~~~q~na~~~~~~~~l~g~~~~l~~~~~~~l~~~l~~ll~d----~~~~~~~~~~~~ 376 (396)
T TIGR03492 317 PVIQLPGKGPQFTYGFAEAQSRLLGGSVFLASKNPEQAAQVVRQLLAD----PELLERCRRNGQ 376 (396)
T ss_pred CEEEEeCCCCHHHHHHHHhhHhhcCCEEecCCCCHHHHHHHHHHHHcC----HHHHHHHHHHHH
Confidence 9999874322 122222 33333334 589999999999984 788888875443
|
This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown. |
| >COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.20 E-value=4e-08 Score=101.55 Aligned_cols=259 Identities=19% Similarity=0.208 Sum_probs=173.5
Q ss_pred CCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEE-EecCchhhhhhhccCCCchHHHHHHHHHHHHhhhcCEEEEeCHHHH
Q 011969 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIV-DWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178 (474)
Q Consensus 100 ~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~ 178 (474)
.+||+.++...-.+|.++ .-.+.+++|+++ ..+-. ...-..+ .....+.+.+.+..|.|++.|+..+
T Consensus 122 ~~P~l~Ii~EtElWPnli---~e~~~~~~p~~LvNaRLS--------~rS~~~y-~k~~~~~~~~~~~i~li~aQse~D~ 189 (419)
T COG1519 122 WRPKLLIIMETELWPNLI---NELKRRGIPLVLVNARLS--------DRSFARY-AKLKFLARLLFKNIDLILAQSEEDA 189 (419)
T ss_pred cCCCEEEEEeccccHHHH---HHHHHcCCCEEEEeeeec--------hhhhHHH-HHHHHHHHHHHHhcceeeecCHHHH
Confidence 789999998877777663 234467788665 22211 0011111 2234556667788999999999999
Q ss_pred HHHHHHhCCce-EEEeCCCCCCCCCC---ChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhccccccccc
Q 011969 179 HELAQNWGIKA-TVLYDQPPEFFHPT---SLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFL 254 (474)
Q Consensus 179 ~~l~~~~~~~~-~vi~n~~~~~f~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (474)
+.+.+. |.+. .+.=| ..++... .......++.+++
T Consensus 190 ~Rf~~L-Ga~~v~v~GN--lKfd~~~~~~~~~~~~~~r~~l~-------------------------------------- 228 (419)
T COG1519 190 QRFRSL-GAKPVVVTGN--LKFDIEPPPQLAAELAALRRQLG-------------------------------------- 228 (419)
T ss_pred HHHHhc-CCcceEEecc--eeecCCCChhhHHHHHHHHHhcC--------------------------------------
Confidence 999884 7653 33222 2222222 1223344444443
Q ss_pred CCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCCh-HHHH
Q 011969 255 KPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK-ESYE 333 (474)
Q Consensus 255 ~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~-~~~~ 333 (474)
..+| +++..++ ....-+.++++.+.+.++ +|+..++++-..|++ +.++
T Consensus 229 -~~r~-v~iaaST--H~GEeei~l~~~~~l~~~---------------------------~~~~llIlVPRHpERf~~v~ 277 (419)
T COG1519 229 -GHRP-VWVAAST--HEGEEEIILDAHQALKKQ---------------------------FPNLLLILVPRHPERFKAVE 277 (419)
T ss_pred -CCCc-eEEEecC--CCchHHHHHHHHHHHHhh---------------------------CCCceEEEecCChhhHHHHH
Confidence 3366 4455554 333455688999999885 899999999999886 7789
Q ss_pred HHHHHcCCCcEEEecCCC-----------CcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEec----cc
Q 011969 334 EKIRRLRLKRVAFRTMWL-----------SAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS----YS 398 (474)
Q Consensus 334 ~~~~~l~l~~V~f~g~~v-----------~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~----~~ 398 (474)
+++++.|+.-..+...-. +--++..+|+.||+.++- .|--.-=|--.+|+.++|+|||.-. ..
T Consensus 278 ~l~~~~gl~~~~rS~~~~~~~~tdV~l~DtmGEL~l~y~~adiAFVG--GSlv~~GGHN~LEpa~~~~pvi~Gp~~~Nf~ 355 (419)
T COG1519 278 NLLKRKGLSVTRRSQGDPPFSDTDVLLGDTMGELGLLYGIADIAFVG--GSLVPIGGHNPLEPAAFGTPVIFGPYTFNFS 355 (419)
T ss_pred HHHHHcCCeEEeecCCCCCCCCCcEEEEecHhHHHHHHhhccEEEEC--CcccCCCCCChhhHHHcCCCEEeCCccccHH
Confidence 999999874333332201 134799999999999983 2211112446799999999999864 45
Q ss_pred ccccccccCCcEEEeCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc
Q 011969 399 CIEELVKVDKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG 448 (474)
Q Consensus 399 ~~~e~v~~~~~G~l~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~ 448 (474)
.+.+-+...+.|+.++|.+.+++.+..++. |++.+++|++++.+..
T Consensus 356 ei~~~l~~~ga~~~v~~~~~l~~~v~~l~~----~~~~r~~~~~~~~~~v 401 (419)
T COG1519 356 DIAERLLQAGAGLQVEDADLLAKAVELLLA----DEDKREAYGRAGLEFL 401 (419)
T ss_pred HHHHHHHhcCCeEEECCHHHHHHHHHHhcC----CHHHHHHHHHHHHHHH
Confidence 666667778889999997777777777776 4899999999998865
|
|
| >TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing | Back alignment and domain information |
|---|
Probab=99.19 E-value=2.9e-08 Score=103.13 Aligned_cols=239 Identities=16% Similarity=0.152 Sum_probs=141.4
Q ss_pred CCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhhhcCEEEEeCHHHHH
Q 011969 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179 (474)
Q Consensus 100 ~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~ 179 (474)
.+||++++++-.+ +.+++.+++...++|++ ++|+-.. +.+ ..- ....+...+.|+..++.++..++
T Consensus 92 ~~Pd~vlv~GD~~--~~la~alaA~~~~IPv~-HveaG~r-----s~~---~~e---E~~r~~i~~la~l~f~~t~~~~~ 157 (365)
T TIGR03568 92 LKPDLVVVLGDRF--EMLAAAIAAALLNIPIA-HIHGGEV-----TEG---AID---ESIRHAITKLSHLHFVATEEYRQ 157 (365)
T ss_pred hCCCEEEEeCCch--HHHHHHHHHHHhCCcEE-EEECCcc-----CCC---Cch---HHHHHHHHHHHhhccCCCHHHHH
Confidence 7899999998432 33356777888899965 4554411 111 111 12223445678889999999888
Q ss_pred HHHHHhCCc---eEEEeCCCCCCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhcccccccccCC
Q 011969 180 ELAQNWGIK---ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKP 256 (474)
Q Consensus 180 ~l~~~~~~~---~~vi~n~~~~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (474)
.+.+. |.+ +.+.-|...+.+.......+..+.+++| +++
T Consensus 158 ~L~~e-g~~~~~i~~tG~~~iD~l~~~~~~~~~~~~~~lg-------------------------------------l~~ 199 (365)
T TIGR03568 158 RVIQM-GEDPDRVFNVGSPGLDNILSLDLLSKEELEEKLG-------------------------------------IDL 199 (365)
T ss_pred HHHHc-CCCCCcEEEECCcHHHHHHhhhccCHHHHHHHhC-------------------------------------CCC
Confidence 88764 543 3333332111111110011233444444 222
Q ss_pred CCCeEEEEEeecc--cCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCChHHHHH
Q 011969 257 NRPALVVSSTSWT--PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEE 334 (474)
Q Consensus 257 ~~~~~i~~~G~l~--~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~ 334 (474)
+.+++++..-+-+ .....+.+.+.++.+.+. ..++.++.-..++....+.+
T Consensus 200 ~~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~---------------------------~~~~~vi~P~~~p~~~~i~~ 252 (365)
T TIGR03568 200 DKPYALVTFHPVTLEKESAEEQIKELLKALDEL---------------------------NKNYIFTYPNADAGSRIINE 252 (365)
T ss_pred CCCEEEEEeCCCcccccCchHHHHHHHHHHHHh---------------------------ccCCEEEEeCCCCCchHHHH
Confidence 3343444333322 223333444444444331 12343333223344444444
Q ss_pred HHHHcC--CCcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecccccccccccCCcEEE
Q 011969 335 KIRRLR--LKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLL 412 (474)
Q Consensus 335 ~~~~l~--l~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~~~~e~v~~~~~G~l 412 (474)
.++++. .++|.+.+. ++..++..+++.|+++|. .|++ -+-||.++|+|+|+. +.-.|.++.+.+++.
T Consensus 253 ~i~~~~~~~~~v~l~~~-l~~~~~l~Ll~~a~~vit---dSSg-----gi~EA~~lg~Pvv~l--~~R~e~~~~g~nvl~ 321 (365)
T TIGR03568 253 AIEEYVNEHPNFRLFKS-LGQERYLSLLKNADAVIG---NSSS-----GIIEAPSFGVPTINI--GTRQKGRLRADSVID 321 (365)
T ss_pred HHHHHhcCCCCEEEECC-CChHHHHHHHHhCCEEEE---cChh-----HHHhhhhcCCCEEee--cCCchhhhhcCeEEE
Confidence 445432 368999998 999999999999999997 5545 348999999999965 467788878888887
Q ss_pred eC-CHHHHHHHHHHHHh
Q 011969 413 FS-SSSELADQLLMLFK 428 (474)
Q Consensus 413 ~~-~~~~la~~i~~l~~ 428 (474)
++ +++++.+++.++.+
T Consensus 322 vg~~~~~I~~a~~~~~~ 338 (365)
T TIGR03568 322 VDPDKEEIVKAIEKLLD 338 (365)
T ss_pred eCCCHHHHHHHHHHHhC
Confidence 76 79999999999543
|
This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate. |
| >PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.5e-10 Score=95.90 Aligned_cols=86 Identities=16% Similarity=0.320 Sum_probs=77.9
Q ss_pred CCCCCCCchHHHHHHhcCCcEEEecccccccccccCCcEEEeCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc-cc
Q 011969 372 SSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LS 450 (474)
Q Consensus 372 ~s~~e~~p~kv~Eama~G~PVia~~~~~~~e~v~~~~~G~l~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~-~~ 450 (474)
++...+++.+++|+||||+|||+.+.++..+++.++..++.++|++++.+++..++++ ++.++++++++++.. ..
T Consensus 5 ~~~~~~~~~r~~E~~a~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~el~~~i~~ll~~----~~~~~~ia~~a~~~v~~~ 80 (92)
T PF13524_consen 5 PSRSDGPNMRIFEAMACGTPVISDDSPGLREIFEDGEHIITYNDPEELAEKIEYLLEN----PEERRRIAKNARERVLKR 80 (92)
T ss_pred CCCCCCCchHHHHHHHCCCeEEECChHHHHHHcCCCCeEEEECCHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHHh
Confidence 4555778999999999999999999999999999999999999999999999999995 999999999999877 48
Q ss_pred cchHHHHHHHH
Q 011969 451 ARWATEWEEHA 461 (474)
Q Consensus 451 ~~w~~~~~~~~ 461 (474)
++|++.|++++
T Consensus 81 ~t~~~~~~~il 91 (92)
T PF13524_consen 81 HTWEHRAEQIL 91 (92)
T ss_pred CCHHHHHHHHH
Confidence 99999988764
|
|
| >PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A | Back alignment and domain information |
|---|
Probab=99.15 E-value=4.1e-10 Score=101.63 Aligned_cols=165 Identities=22% Similarity=0.287 Sum_probs=85.5
Q ss_pred EeCCCCCCchHHHH-HHHHHhhCCCeEEEEecCCCCCCcceeccCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHH
Q 011969 11 VLGDLGRSPRMQYQ-ALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFF 89 (474)
Q Consensus 11 ~~~~~g~~~r~~~~-a~~l~~~~g~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (474)
.....||.+|+... +..|+++ ||+|+|++.....+.... ......... ................+
T Consensus 7 ~~~~~GG~e~~~~~l~~~l~~~-G~~v~v~~~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~~~~~~~~-------- 72 (177)
T PF13439_consen 7 FLPNIGGAERVVLNLARALAKR-GHEVTVVSPGVKDPIEEE----LVKIFVKIP-YPIRKRFLRSFFFMRRL-------- 72 (177)
T ss_dssp -TTSSSHHHHHHHHHHHHHHHT-T-EEEEEESS-TTS-SST----EEEE---TT--SSTSS--HHHHHHHHH--------
T ss_pred cCCCCChHHHHHHHHHHHHHHC-CCEEEEEEcCCCccchhh----ccceeeeee-cccccccchhHHHHHHH--------
Confidence 34556777776654 5667775 999999998765432111 111111110 00011111111111111
Q ss_pred HHHHHHhhhcCCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhhhcCE
Q 011969 90 MLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANG 169 (474)
Q Consensus 90 ~~~~~~~~~~~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ 169 (474)
+..+.+ .+||+||++.+...... ..+.. +.|++++.|+.... ........+....+...+++.+.+.+|.
T Consensus 73 ---~~~i~~-~~~DiVh~~~~~~~~~~---~~~~~--~~~~v~~~H~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (177)
T PF13439_consen 73 ---RRLIKK-EKPDIVHIHGPPAFWIA---LLACR--KVPIVYTIHGPYFE-RRFLKSKLSPYSYLNFRIERKLYKKADR 142 (177)
T ss_dssp ---HHHHHH-HT-SEEECCTTHCCCHH---HHHHH--CSCEEEEE-HHH---HHTTTTSCCCHHHHHHCTTHHHHCCSSE
T ss_pred ---HHHHHH-cCCCeEEecccchhHHH---HHhcc--CCCEEEEeCCCccc-ccccccccchhhhhhhhhhhhHHhcCCE
Confidence 122222 69999999986443322 12222 89999999998521 0001223444455555667777889999
Q ss_pred EEEeCHHHHHHHHHHhCCc---eEEEeCCC-CCCC
Q 011969 170 CLCVTQAMQHELAQNWGIK---ATVLYDQP-PEFF 200 (474)
Q Consensus 170 vi~vS~~~~~~l~~~~~~~---~~vi~n~~-~~~f 200 (474)
++|+|+.+++.+.+ +|.+ +.+||||. .+.|
T Consensus 143 ii~vS~~~~~~l~~-~~~~~~ki~vI~ngid~~~F 176 (177)
T PF13439_consen 143 IIAVSESTKDELIK-FGIPPEKIHVIYNGIDTDRF 176 (177)
T ss_dssp EEESSHHHHHHHHH-HT--SS-EEE----B-CCCH
T ss_pred EEEECHHHHHHHHH-hCCcccCCEEEECCccHHHc
Confidence 99999999999999 7743 89999994 4555
|
|
| >PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3 | Back alignment and domain information |
|---|
Probab=99.13 E-value=3.4e-08 Score=106.20 Aligned_cols=267 Identities=18% Similarity=0.173 Sum_probs=151.5
Q ss_pred HHHHHHHhhhcCEEEEeCHHHHHHHHHHhCCc-eEEEeCCCC-CCCCCCCh-HHH-HHHHHhhhhccCCCCCcccccccc
Q 011969 157 RWIEKYYGKMANGCLCVTQAMQHELAQNWGIK-ATVLYDQPP-EFFHPTSL-EEK-HELFCRLNKILHQPLGVQDCVSNA 232 (474)
Q Consensus 157 ~~~e~~~~~~ad~vi~vS~~~~~~l~~~~~~~-~~vi~n~~~-~~f~~~~~-~~~-~~~~~~l~~~~~~~~~~~~~~~~~ 232 (474)
..+|+...+.||.+.+||+-++.+.....+.+ -.|+|||.+ ++|..... ... ..-++++.
T Consensus 212 ~~iEraaA~~AdvFTTVSeITa~Ea~~LL~r~pDvV~pNGl~v~~~~~~~efqnl~~~~k~ki~---------------- 275 (633)
T PF05693_consen 212 HSIERAAAHYADVFTTVSEITAKEAEHLLKRKPDVVTPNGLNVDKFPALHEFQNLHAKAKEKIH---------------- 275 (633)
T ss_dssp HHHHHHHHHHSSEEEESSHHHHHHHHHHHSS--SEE----B-GGGTSSTTHHHHHHHHHHHHHH----------------
T ss_pred HHHHHHHHHhcCeeeehhhhHHHHHHHHhCCCCCEEcCCCccccccccchHHHHHHHHHHHHHH----------------
Confidence 57899999999999999999999988777665 588899955 44443322 111 11222222
Q ss_pred ccCCcCcchhhhhc-ccccccccCCCCCeEEEEEeecc-cCCCHHHHHHHHHHhHHHHhhh-hc-----------cCCCc
Q 011969 233 GMEGQKADETIFTS-LAGIDVFLKPNRPALVVSSTSWT-PDEDFGILLEAALMYDRRVAAI-LN-----------EDDST 298 (474)
Q Consensus 233 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~G~l~-~~k~~~~Li~a~~~l~~~~~~~-~~-----------~~~~~ 298 (474)
.|.. .-.+.+.+.++..+.+..+||.. ..||+|.+|+|+..+...++.. .. .-.+-
T Consensus 276 ----------~fv~~~f~g~~dfd~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~~~tVVaFii~pa~~~~~ 345 (633)
T PF05693_consen 276 ----------EFVRGHFYGHYDFDLDKTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGSDKTVVAFIIVPAKTNSF 345 (633)
T ss_dssp ----------HHHHHHSTT---S-GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT-S-EEEEEEE---SEEEE
T ss_pred ----------HHHHHHhcccCCCCccceEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCCCCeEEEEEEecCccCCc
Confidence 1111 01112223445566888899987 5699999999999987753211 00 00011
Q ss_pred hhhH-----hHhhhc-------------------------------------------CC-ccccCCCEEEEEEeCCCCh
Q 011969 299 NEEV-----FLKEIS-------------------------------------------DG-KQYLYPRLLFIITGKGPDK 329 (474)
Q Consensus 299 ~~~~-----~~~~~~-------------------------------------------~~-~~~~~~~~~l~ivG~g~~~ 329 (474)
|-|+ ..|+|+ .. +....|-+.-.+. ....
T Consensus 346 ~ve~l~~~a~~~~l~~t~~~i~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~--d~~~ 423 (633)
T PF05693_consen 346 NVESLKGQAVTKQLRDTVDEIQEKIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLH--DDSN 423 (633)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEET--TTTT
T ss_pred CHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCC--CCcc
Confidence 1111 111111 01 1111122222332 2334
Q ss_pred HHHHHHHHHcCC-C------cEEEecCCCCcc------cHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEec
Q 011969 330 ESYEEKIRRLRL-K------RVAFRTMWLSAE------DYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS 396 (474)
Q Consensus 330 ~~~~~~~~~l~l-~------~V~f~g~~v~~~------~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~ 396 (474)
+.+...++++++ + +|.|.+.+++.. ++.+++..||++|+ ||++|++|.+-+|+.++|+|.|+|+
T Consensus 424 DpILn~irr~~L~N~~~drVKVIF~P~yL~~~dgif~l~Y~dfv~GcdLgvF---PSYYEPWGYTPlE~~a~gVPsITTn 500 (633)
T PF05693_consen 424 DPILNMIRRLGLFNNPEDRVKVIFHPEYLSGTDGIFNLDYYDFVRGCDLGVF---PSYYEPWGYTPLECTAFGVPSITTN 500 (633)
T ss_dssp -HHHHHHHHTT----TT-SEEEEE--S---TTSSSS-S-HHHHHHHSSEEEE-----SSBSS-HHHHHHHHTT--EEEET
T ss_pred CHHHHHHHhCCCCCCCCCceEEEEeeccccCCCCCCCCCHHHHhccCceeee---ccccccccCChHHHhhcCCceeecc
Confidence 668888899887 2 488887766544 78999999999999 7999999999999999999999999
Q ss_pred cccccccccc-----CCcEEEe-C----C----HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHH
Q 011969 397 YSCIEELVKV-----DKNGLLF-S----S----SSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEW 457 (474)
Q Consensus 397 ~~~~~e~v~~-----~~~G~l~-~----~----~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~ 457 (474)
.+|....+.+ ...|+.+ + + ++++++.|..+... +..++..+|+++.+.+....|..--
T Consensus 501 LsGFG~~~~~~~~~~~~~GV~VvdR~~~n~~e~v~~la~~l~~f~~~---~~rqri~~Rn~ae~LS~~~dW~~~~ 572 (633)
T PF05693_consen 501 LSGFGCWMQEHIEDPEEYGVYVVDRRDKNYDESVNQLADFLYKFCQL---SRRQRIIQRNRAERLSDLADWKNFG 572 (633)
T ss_dssp TBHHHHHHHTTS-HHGGGTEEEE-SSSS-HHHHHHHHHHHHHHHHT-----HHHHHHHHHHHHHHGGGGBHHHHC
T ss_pred chhHHHHHHHhhccCcCCcEEEEeCCCCCHHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 7766644432 2356655 2 3 45566666666654 6778899999999988888897533
|
Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D. |
| >TIGR02919 accessory Sec system glycosyltransferase GtfB | Back alignment and domain information |
|---|
Probab=99.10 E-value=2.6e-08 Score=105.57 Aligned_cols=123 Identities=12% Similarity=0.156 Sum_probs=99.3
Q ss_pred HHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCC-hHHHHHHHHHcCCCcEEEecCCCCc
Q 011969 275 GILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD-KESYEEKIRRLRLKRVAFRTMWLSA 353 (474)
Q Consensus 275 ~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~-~~~~~~~~~~l~l~~V~f~g~~v~~ 353 (474)
+..|+++..+.++ .|+++|.| |.+.+ .+.+.++ .++ ++|...+. ...
T Consensus 291 s~~I~~i~~Lv~~---------------------------lPd~~f~I-ga~te~s~kL~~L-~~y--~nvvly~~-~~~ 338 (438)
T TIGR02919 291 SDQIEHLEEIVQA---------------------------LPDYHFHI-AALTEMSSKLMSL-DKY--DNVKLYPN-ITT 338 (438)
T ss_pred HHHHHHHHHHHHh---------------------------CCCcEEEE-EecCcccHHHHHH-Hhc--CCcEEECC-cCh
Confidence 7889999999884 79999999 87766 5667666 665 46666655 456
Q ss_pred ccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEeccc-ccccccccCCcEEEeC--CHHHHHHHHHHHHhCC
Q 011969 354 EDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS-CIEELVKVDKNGLLFS--SSSELADQLLMLFKGF 430 (474)
Q Consensus 354 ~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~-~~~e~v~~~~~G~l~~--~~~~la~~i~~l~~~~ 430 (474)
.++..+|..||+++. .+.++++++.+.||++.|+||++-+.. +..+++.+ |.+++ ++++|+++|..++.+
T Consensus 339 ~~l~~ly~~~dlyLd---in~~e~~~~al~eA~~~G~pI~afd~t~~~~~~i~~---g~l~~~~~~~~m~~~i~~lL~d- 411 (438)
T TIGR02919 339 QKIQELYQTCDIYLD---INHGNEILNAVRRAFEYNLLILGFEETAHNRDFIAS---ENIFEHNEVDQLISKLKDLLND- 411 (438)
T ss_pred HHHHHHHHhccEEEE---ccccccHHHHHHHHHHcCCcEEEEecccCCcccccC---CceecCCCHHHHHHHHHHHhcC-
Confidence 689999999999999 899999999999999999999999843 44466644 67775 699999999999985
Q ss_pred CCCHHHHHH
Q 011969 431 PDDSDVLKK 439 (474)
Q Consensus 431 ~~~~~~~~~ 439 (474)
++.+++
T Consensus 412 ---~~~~~~ 417 (438)
T TIGR02919 412 ---PNQFRE 417 (438)
T ss_pred ---HHHHHH
Confidence 554444
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. |
| >PF13528 Glyco_trans_1_3: Glycosyl transferase family 1 | Back alignment and domain information |
|---|
Probab=99.09 E-value=1.4e-08 Score=102.35 Aligned_cols=117 Identities=23% Similarity=0.343 Sum_probs=82.6
Q ss_pred CCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCChHHHHHHH
Q 011969 257 NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKI 336 (474)
Q Consensus 257 ~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~ 336 (474)
+.+.+++|.|..... .++++++.+ ++..++++|.+..
T Consensus 191 ~~~~iLv~~gg~~~~----~~~~~l~~~-------------------------------~~~~~~v~g~~~~-------- 227 (318)
T PF13528_consen 191 DEPKILVYFGGGGPG----DLIEALKAL-------------------------------PDYQFIVFGPNAA-------- 227 (318)
T ss_pred CCCEEEEEeCCCcHH----HHHHHHHhC-------------------------------CCCeEEEEcCCcc--------
Confidence 345588999987665 556666653 5678888886521
Q ss_pred HHcCCCcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecccc------cccccccCCcE
Q 011969 337 RRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC------IEELVKVDKNG 410 (474)
Q Consensus 337 ~~l~l~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~~------~~e~v~~~~~G 410 (474)
+...+||.+.+. +.+++..++..||++|. ..|. +.+.|++++|+|++.....+ ..+.+++.+.|
T Consensus 228 -~~~~~ni~~~~~--~~~~~~~~m~~ad~vIs----~~G~---~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~ 297 (318)
T PF13528_consen 228 -DPRPGNIHVRPF--STPDFAELMAAADLVIS----KGGY---TTISEALALGKPALVIPRPGQDEQEYNARKLEELGLG 297 (318)
T ss_pred -cccCCCEEEeec--ChHHHHHHHHhCCEEEE----CCCH---HHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCe
Confidence 111468998875 34899999999999997 2221 26999999999999987643 23445556677
Q ss_pred EEeC----CHHHHHHHHHHH
Q 011969 411 LLFS----SSSELADQLLML 426 (474)
Q Consensus 411 ~l~~----~~~~la~~i~~l 426 (474)
...+ +++.|+++|+++
T Consensus 298 ~~~~~~~~~~~~l~~~l~~~ 317 (318)
T PF13528_consen 298 IVLSQEDLTPERLAEFLERL 317 (318)
T ss_pred EEcccccCCHHHHHHHHhcC
Confidence 7754 578888887754
|
|
| >cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Probab=99.02 E-value=2.6e-07 Score=96.21 Aligned_cols=89 Identities=16% Similarity=0.122 Sum_probs=63.3
Q ss_pred CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecccc----cccccccCCcEEEeC---
Q 011969 342 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVDKNGLLFS--- 414 (474)
Q Consensus 342 ~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~~----~~e~v~~~~~G~l~~--- 414 (474)
++|.+.+. +|. ..++..||++|. ..| ..++.||+++|+|+|...... ..+.+...+.|...+
T Consensus 288 ~~v~~~~~-~p~---~~ll~~~d~~I~----hgG---~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~G~g~~l~~~~ 356 (401)
T cd03784 288 DNVRVVDF-VPH---DWLLPRCAAVVH----HGG---AGTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAGPALDPRE 356 (401)
T ss_pred CceEEeCC-CCH---HHHhhhhheeee----cCC---chhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHCCCCCCCCccc
Confidence 68998876 654 566889999996 222 248999999999999986433 345565666777664
Q ss_pred -CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Q 011969 415 -SSSELADQLLMLFKGFPDDSDVLKKLRNGTLE 446 (474)
Q Consensus 415 -~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~ 446 (474)
+.+++.+++.+++++ ..+++..+.+.+
T Consensus 357 ~~~~~l~~al~~~l~~-----~~~~~~~~~~~~ 384 (401)
T cd03784 357 LTAERLAAALRRLLDP-----PSRRRAAALLRR 384 (401)
T ss_pred CCHHHHHHHHHHHhCH-----HHHHHHHHHHHH
Confidence 588999999999873 334444444444
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
| >PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.8e-08 Score=89.08 Aligned_cols=128 Identities=16% Similarity=0.182 Sum_probs=84.5
Q ss_pred chHHHHHHHHHhhCCCeEEEEecCCCCCCcceeccCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhh
Q 011969 19 PRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVK 98 (474)
Q Consensus 19 ~r~~~~a~~l~~~~g~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (474)
+.....+..|.++ |++|++++..... .......++++++++ .. .+. ....+. .. . ++..+ +
T Consensus 11 ~~~~~~~~~L~~~-g~~V~ii~~~~~~--~~~~~~~~i~~~~~~--~~-~k~---~~~~~~-~~----~----l~k~i-k 71 (139)
T PF13477_consen 11 TFIYNLAKELKKR-GYDVHIITPRNDY--EKYEIIEGIKVIRLP--SP-RKS---PLNYIK-YF----R----LRKII-K 71 (139)
T ss_pred HHHHHHHHHHHHC-CCEEEEEEcCCCc--hhhhHhCCeEEEEec--CC-CCc---cHHHHH-HH----H----HHHHh-c
Confidence 4566778889987 9999999986543 244446799999997 11 111 111111 11 1 12223 3
Q ss_pred cCCCCEEEEeCCCChhHHHHHHHHHhhCC-CcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhhhcCEEEEeC
Q 011969 99 IASPDVFLVQNPPSVPTLVAVKWASSLRR-SAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVT 174 (474)
Q Consensus 99 ~~~~Dvi~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS 174 (474)
..+||+||+|.+. +..+++.+++++.+ +|+|++.|+... .......++.+++.+.+.+.||.+++.|
T Consensus 72 ~~~~DvIh~h~~~--~~~~~~~l~~~~~~~~~~i~~~hg~~~-------~~~~~~~~~~~~~~~~~~k~~~~ii~~~ 139 (139)
T PF13477_consen 72 KEKPDVIHCHTPS--PYGLFAMLAKKLLKNKKVIYTVHGSDF-------YNSSKKKKLKKFIIKFAFKRADKIIVQS 139 (139)
T ss_pred cCCCCEEEEecCC--hHHHHHHHHHHHcCCCCEEEEecCCee-------ecCCchHHHHHHHHHHHHHhCCEEEEcC
Confidence 3789999999963 22445677777777 999999998732 1222222366789999999999999875
|
|
| >PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases | Back alignment and domain information |
|---|
Probab=98.97 E-value=6.8e-08 Score=90.69 Aligned_cols=174 Identities=15% Similarity=0.182 Sum_probs=111.3
Q ss_pred ceEEEEEeCCCC-CCchHHHHHHHHHhh---CCCeEEEEecCCCCCCcceeccCCeEEEEeecCCCCCCC-CCchhHHHH
Q 011969 5 GRACVVVLGDLG-RSPRMQYQALSLARQ---MSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRG-LPKVLKPVL 79 (474)
Q Consensus 5 ~~~~i~~~~~~g-~~~r~~~~a~~l~~~---~g~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~-~~~~~~~~~ 79 (474)
++++|+..-.+. ..++.+..+..|+.. .|++|+|.|.....+. ......|+++..++.. ..+ ...+...+.
T Consensus 2 kkIaIiGtrGIPa~YGGfET~ve~L~~~l~~~g~~v~Vyc~~~~~~~-~~~~y~gv~l~~i~~~---~~g~~~si~yd~~ 77 (185)
T PF09314_consen 2 KKIAIIGTRGIPARYGGFETFVEELAPRLVSKGIDVTVYCRSDYYPY-KEFEYNGVRLVYIPAP---KNGSAESIIYDFL 77 (185)
T ss_pred ceEEEEeCCCCCcccCcHHHHHHHHHHHHhcCCceEEEEEccCCCCC-CCcccCCeEEEEeCCC---CCCchHHHHHHHH
Confidence 457777765553 345566555555433 4999999997754432 4556779999999821 121 111111111
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCEEEEeCCCChhHHHHHHHHHhhC--CCcEEEEecCchhhhhhhccCCCchH-HHHH
Q 011969 80 LLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLR--RSAFIVDWHNFGYTLLSLSLGRRSHF-VSIY 156 (474)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~h~~~~~~~~~~~~~~~~~-~~~~ 156 (474)
.+.. .++.......+.|++++..... ..++..+.++++ |.|+++..|+..+ ...+++.+ ++++
T Consensus 78 sl~~-------al~~~~~~~~~~~ii~ilg~~~--g~~~~~~~r~~~~~g~~v~vN~DGlEW-----kR~KW~~~~k~~l 143 (185)
T PF09314_consen 78 SLLH-------ALRFIKQDKIKYDIILILGYGI--GPFFLPFLRKLRKKGGKVVVNMDGLEW-----KRAKWGRPAKKYL 143 (185)
T ss_pred HHHH-------HHHHHhhccccCCEEEEEcCCc--cHHHHHHHHhhhhcCCcEEECCCcchh-----hhhhcCHHHHHHH
Confidence 1111 1111122224688999887421 222344555554 5699999999865 22334444 6788
Q ss_pred HHHHHHHhhhcCEEEEeCHHHHHHHHHHhC-CceEEEeCCC
Q 011969 157 RWIEKYYGKMANGCLCVTQAMQHELAQNWG-IKATVLYDQP 196 (474)
Q Consensus 157 ~~~e~~~~~~ad~vi~vS~~~~~~l~~~~~-~~~~vi~n~~ 196 (474)
++-|+...+.||.+||-|+..+++++++++ .+.++|++|.
T Consensus 144 k~~E~~avk~ad~lIaDs~~I~~y~~~~y~~~~s~~IaYGa 184 (185)
T PF09314_consen 144 KFSEKLAVKYADRLIADSKGIQDYIKERYGRKKSTFIAYGA 184 (185)
T ss_pred HHHHHHHHHhCCEEEEcCHHHHHHHHHHcCCCCcEEecCCC
Confidence 899999999999999999999999999999 7789998874
|
|
| >TIGR01426 MGT glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Probab=98.91 E-value=6.3e-07 Score=93.39 Aligned_cols=108 Identities=19% Similarity=0.254 Sum_probs=70.7
Q ss_pred EEEEEeCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEeccc
Q 011969 319 LFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS 398 (474)
Q Consensus 319 ~l~ivG~g~~~~~~~~~~~~l~l~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~ 398 (474)
.++.+|.+.+.+.+. .+ .++|.+.+. +|.. .++..||++|. .+ | ..++.||+++|+|+|+....
T Consensus 257 ~i~~~g~~~~~~~~~----~~-~~~v~~~~~-~p~~---~ll~~~~~~I~---hg-G---~~t~~Eal~~G~P~v~~p~~ 320 (392)
T TIGR01426 257 VVLSVGRGVDPADLG----EL-PPNVEVRQW-VPQL---EILKKADAFIT---HG-G---MNSTMEALFNGVPMVAVPQG 320 (392)
T ss_pred EEEEECCCCChhHhc----cC-CCCeEEeCC-CCHH---HHHhhCCEEEE---CC-C---chHHHHHHHhCCCEEecCCc
Confidence 445667665433222 11 258888865 7753 67899999987 22 2 13799999999999997532
Q ss_pred ----ccccccccCCcEEEeC----CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Q 011969 399 ----CIEELVKVDKNGLLFS----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLE 446 (474)
Q Consensus 399 ----~~~e~v~~~~~G~l~~----~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~ 446 (474)
...+.+.+.+.|.... +.++++++|.+++++ ++.++++++-..+
T Consensus 321 ~dq~~~a~~l~~~g~g~~l~~~~~~~~~l~~ai~~~l~~----~~~~~~~~~l~~~ 372 (392)
T TIGR01426 321 ADQPMTARRIAELGLGRHLPPEEVTAEKLREAVLAVLSD----PRYAERLRKMRAE 372 (392)
T ss_pred ccHHHHHHHHHHCCCEEEeccccCCHHHHHHHHHHHhcC----HHHHHHHHHHHHH
Confidence 3334455666777664 478999999999985 5544444444333
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. |
| >cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences | Back alignment and domain information |
|---|
Probab=98.90 E-value=4.8e-07 Score=101.61 Aligned_cols=186 Identities=16% Similarity=0.065 Sum_probs=133.9
Q ss_pred cCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCCh----
Q 011969 254 LKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK---- 329 (474)
Q Consensus 254 ~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~---- 329 (474)
+.++.+ ++++++|+...|+.+++++.+..+.+- .+++. ..+.|++.|++...
T Consensus 474 ldpd~l-tigfarRfa~YKR~~Lil~dl~rl~~i--------------------l~~~~---~pvQ~IfaGKAhP~d~~g 529 (778)
T cd04299 474 LDPNVL-TIGFARRFATYKRATLLLRDPERLKRL--------------------LNDPE---RPVQFIFAGKAHPADEPG 529 (778)
T ss_pred cCCCcc-EEeeeecchhhhhHHHHHHHHHHHHHH--------------------hhCCC---CCeEEEEEEecCccchHH
Confidence 445554 899999999999999999988876541 11111 24899999987422
Q ss_pred H----HHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCC--CCCCchHHHHHHhcCCcEEEeccccccc
Q 011969 330 E----SYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS--GLDLPMKVVDMFGCGLPVCAVSYSCIEE 402 (474)
Q Consensus 330 ~----~~~~~~~~l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~--~e~~p~kv~Eama~G~PVia~~~~~~~e 402 (474)
. .+.+.+++... ++|.|+.. .+-+-...++..||+.++ +|. .|.+|+.=+=||..|.+-+++--|-..|
T Consensus 530 K~iIk~i~~~a~~p~~~~kVvfle~-Yd~~lA~~LvaG~DvwLn---~prrp~EAsGTSgMKA~~NG~LnlSvlDGww~E 605 (778)
T cd04299 530 KELIQEIVEFSRRPEFRGRIVFLED-YDMALARHLVQGVDVWLN---TPRRPLEASGTSGMKAALNGGLNLSVLDGWWDE 605 (778)
T ss_pred HHHHHHHHHHHhCcCCCCcEEEEcC-CCHHHHHHHHhhhhhccc---CCCCCCCCCccchHHHHHcCCeeeecccCcccc
Confidence 1 33334443333 58999876 677778888999999999 554 6899999999999999999998888888
Q ss_pred ccccCCcEEEeCC--------------HHHHHHHHHH-HHhCCCC-----CHHHHHHHHHHHHHh-ccccchHHHHHHHH
Q 011969 403 LVKVDKNGLLFSS--------------SSELADQLLM-LFKGFPD-----DSDVLKKLRNGTLEM-GLSARWATEWEEHA 461 (474)
Q Consensus 403 ~v~~~~~G~l~~~--------------~~~la~~i~~-l~~~~~~-----~~~~~~~~~~~~~~~-~~~~~w~~~~~~~~ 461 (474)
.. ++.||+.+.+ .++|.+.|++ ++-.|-. .|....+|.+++... ...++|..+.++.+
T Consensus 606 ~~-~g~nGwaig~~~~~~~~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~ 684 (778)
T cd04299 606 GY-DGENGWAIGDGDEYEDDEYQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYV 684 (778)
T ss_pred cc-CCCCceEeCCCccccChhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHH
Confidence 77 7899999953 4456666654 3312211 256677777777653 46788998888888
Q ss_pred HHHHHHH
Q 011969 462 KPLITEV 468 (474)
Q Consensus 462 ~~~~~~~ 468 (474)
++++.-.
T Consensus 685 ~~~Y~p~ 691 (778)
T cd04299 685 ERFYLPA 691 (778)
T ss_pred HHhHHHH
Confidence 8777543
|
Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea. |
| >TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG | Back alignment and domain information |
|---|
Probab=98.83 E-value=5.9e-07 Score=89.93 Aligned_cols=255 Identities=16% Similarity=0.078 Sum_probs=142.8
Q ss_pred CCCCchHHHHHHHHHhhCCCeEEEEecCCCCCCcceeccCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHHHHHHH
Q 011969 15 LGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWF 94 (474)
Q Consensus 15 ~g~~~r~~~~a~~l~~~~g~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (474)
+|+--|....|..|.++ |++|..++...+....+.....|..++.++ ... . ...-...+...+.+
T Consensus 14 ~GHv~Rcl~LA~~l~~~-g~~v~f~~~~~~~~~~~~i~~~g~~v~~~~--~~~--~---~~~d~~~~~~~l~~------- 78 (279)
T TIGR03590 14 LGHVMRCLTLARALHAQ-GAEVAFACKPLPGDLIDLLLSAGFPVYELP--DES--S---RYDDALELINLLEE------- 78 (279)
T ss_pred ccHHHHHHHHHHHHHHC-CCEEEEEeCCCCHHHHHHHHHcCCeEEEec--CCC--c---hhhhHHHHHHHHHh-------
Confidence 45667888888888775 999999997765432345567788888887 110 0 01112222222222
Q ss_pred HhhhcCCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhhhcCEEEEeC
Q 011969 95 LCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVT 174 (474)
Q Consensus 95 ~~~~~~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS 174 (474)
.+||++++.+... .... ...++ ..+ +.++.+-|+.. +. ..||.++..+
T Consensus 79 -----~~~d~vV~D~y~~-~~~~-~~~~k-~~~-~~l~~iDD~~~-------~~----------------~~~D~vin~~ 126 (279)
T TIGR03590 79 -----EKFDILIVDHYGL-DADW-EKLIK-EFG-RKILVIDDLAD-------RP----------------HDCDLLLDQN 126 (279)
T ss_pred -----cCCCEEEEcCCCC-CHHH-HHHHH-HhC-CeEEEEecCCC-------CC----------------cCCCEEEeCC
Confidence 6899999987532 2221 12222 223 34444555410 00 1578777776
Q ss_pred HHHHHHHHHHhCCceEEEeCCCCCCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhccccccccc
Q 011969 175 QAMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFL 254 (474)
Q Consensus 175 ~~~~~~l~~~~~~~~~vi~n~~~~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (474)
.............+-..+.-|+. |.|. +.++.+.-... ..
T Consensus 127 ~~~~~~~y~~~~~~~~~~l~G~~--Y~~l----r~eF~~~~~~~----------------------------------~~ 166 (279)
T TIGR03590 127 LGADASDYQGLVPANCRLLLGPS--YALL----REEFYQLATAN----------------------------------KR 166 (279)
T ss_pred CCcCHhHhcccCcCCCeEEecch--HHhh----hHHHHHhhHhh----------------------------------hc
Confidence 64221111110011122233432 2222 11221110000 00
Q ss_pred CCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCC-CChHHHH
Q 011969 255 KPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKG-PDKESYE 333 (474)
Q Consensus 255 ~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g-~~~~~~~ 333 (474)
+.+.+.+++..|...+.+....+++++..+.. ..++. +++|.+ +..++++
T Consensus 167 ~~~~~~iLi~~GG~d~~~~~~~~l~~l~~~~~----------------------------~~~i~-vv~G~~~~~~~~l~ 217 (279)
T TIGR03590 167 RKPLRRVLVSFGGADPDNLTLKLLSALAESQI----------------------------NISIT-LVTGSSNPNLDELK 217 (279)
T ss_pred ccccCeEEEEeCCcCCcCHHHHHHHHHhcccc----------------------------CceEE-EEECCCCcCHHHHH
Confidence 11223477888877776656677777765421 12333 477866 5567777
Q ss_pred HHHHHcCCCcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEeccc
Q 011969 334 EKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS 398 (474)
Q Consensus 334 ~~~~~l~l~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~ 398 (474)
+.++.. ++|.+.+. .+++..++..||++|.. -|.++.|++++|+|+|+....
T Consensus 218 ~~~~~~--~~i~~~~~---~~~m~~lm~~aDl~Is~--------~G~T~~E~~a~g~P~i~i~~~ 269 (279)
T TIGR03590 218 KFAKEY--PNIILFID---VENMAELMNEADLAIGA--------AGSTSWERCCLGLPSLAICLA 269 (279)
T ss_pred HHHHhC--CCEEEEeC---HHHHHHHHHHCCEEEEC--------CchHHHHHHHcCCCEEEEEec
Confidence 777664 38998877 78999999999999982 245899999999999998653
|
This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases. |
| >TIGR00661 MJ1255 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=98.65 E-value=1.3e-05 Score=81.51 Aligned_cols=77 Identities=16% Similarity=0.269 Sum_probs=53.8
Q ss_pred CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEeccccccc------ccccCCcEEEeC-
Q 011969 342 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEE------LVKVDKNGLLFS- 414 (474)
Q Consensus 342 ~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~~~~e------~v~~~~~G~l~~- 414 (474)
+++.+.+. .+ +++..++..||++|+ .+ | . .++.||+++|+|++.....+..| .+.+.+.|...+
T Consensus 229 ~~v~~~~~-~~-~~~~~~l~~ad~vI~---~~-G--~-~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l~~ 299 (321)
T TIGR00661 229 ENVEIRRI-TT-DNFKELIKNAELVIT---HG-G--F-SLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIALEY 299 (321)
T ss_pred CCEEEEEC-Ch-HHHHHHHHhCCEEEE---CC-C--h-HHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEEcCh
Confidence 58888865 44 789999999999998 33 2 1 27999999999999998654322 455666777665
Q ss_pred -CHHHHHHHHHHHHh
Q 011969 415 -SSSELADQLLMLFK 428 (474)
Q Consensus 415 -~~~~la~~i~~l~~ 428 (474)
+. ++.+++...++
T Consensus 300 ~~~-~~~~~~~~~~~ 313 (321)
T TIGR00661 300 KEL-RLLEAILDIRN 313 (321)
T ss_pred hhH-HHHHHHHhccc
Confidence 34 44444444443
|
This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases. |
| >PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 | Back alignment and domain information |
|---|
Probab=98.59 E-value=1e-06 Score=91.00 Aligned_cols=245 Identities=18% Similarity=0.178 Sum_probs=133.7
Q ss_pred CCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhhhcCEEEEeCHHHHH
Q 011969 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179 (474)
Q Consensus 100 ~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~ 179 (474)
.+||+|++++-. ...+++.+++...++| |.++|.--.+ .....+.. -......+.+.|+..+|.++..++
T Consensus 66 ~~Pd~Vlv~GD~--~~~la~alaA~~~~ip-v~HieaGlRs-----~d~~~g~~--de~~R~~i~~la~lhf~~t~~~~~ 135 (346)
T PF02350_consen 66 EKPDAVLVLGDR--NEALAAALAAFYLNIP-VAHIEAGLRS-----GDRTEGMP--DEINRHAIDKLAHLHFAPTEEARE 135 (346)
T ss_dssp HT-SEEEEETTS--HHHHHHHHHHHHTT-E-EEEES----------S-TTSSTT--HHHHHHHHHHH-SEEEESSHHHHH
T ss_pred cCCCEEEEEcCC--chHHHHHHHHHHhCCC-EEEecCCCCc-----cccCCCCc--hhhhhhhhhhhhhhhccCCHHHHH
Confidence 789999998753 3444677888889999 6667654110 01111110 112334556789999999999999
Q ss_pred HHHHHhCCce-EEEeCCCCCCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhcccccccccCCCC
Q 011969 180 ELAQNWGIKA-TVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKPNR 258 (474)
Q Consensus 180 ~l~~~~~~~~-~vi~n~~~~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (474)
.|.+. |.+. .+...|.+ ..+.+...... .. ..+. ...+.....+
T Consensus 136 ~L~~~-G~~~~rI~~vG~~---------~~D~l~~~~~~---------------------~~-~~~~---~~~i~~~~~~ 180 (346)
T PF02350_consen 136 RLLQE-GEPPERIFVVGNP---------GIDALLQNKEE---------------------IE-EKYK---NSGILQDAPK 180 (346)
T ss_dssp HHHHT-T--GGGEEE---H---------HHHHHHHHHHT---------------------TC-C-HH---HHHHHHCTTS
T ss_pred HHHhc-CCCCCeEEEEChH---------HHHHHHHhHHH---------------------Hh-hhhh---hHHHHhccCC
Confidence 99885 7642 22222321 00111100000 00 0000 0000001344
Q ss_pred CeEEEEEeecccC---CCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCC--hHHHH
Q 011969 259 PALVVSSTSWTPD---EDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD--KESYE 333 (474)
Q Consensus 259 ~~~i~~~G~l~~~---k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~--~~~~~ 333 (474)
+++++..=+.+.. +....+.++++.+.++ +++.+++.....+ ...+.
T Consensus 181 ~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~----------------------------~~~~vi~~~hn~p~~~~~i~ 232 (346)
T PF02350_consen 181 PYILVTLHPVTNEDNPERLEQILEALKALAER----------------------------QNVPVIFPLHNNPRGSDIII 232 (346)
T ss_dssp EEEEEE-S-CCCCTHH--HHHHHHHHHHHHHH----------------------------TTEEEEEE--S-HHHHHHHH
T ss_pred CEEEEEeCcchhcCChHHHHHHHHHHHHHHhc----------------------------CCCcEEEEecCCchHHHHHH
Confidence 5455555333332 3456777777777662 6788988886433 34455
Q ss_pred HHHHHcCCCcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEec-ccccccccccCCcEEE
Q 011969 334 EKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS-YSCIEELVKVDKNGLL 412 (474)
Q Consensus 334 ~~~~~l~l~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~-~~~~~e~v~~~~~G~l 412 (474)
+..+++ +++.+... ++..++..+++.|++.|- .|.| ..-||..+|+|+|... .+.-.+.+..+.+-+
T Consensus 233 ~~l~~~--~~v~~~~~-l~~~~~l~ll~~a~~vvg---dSsG-----I~eEa~~lg~P~v~iR~~geRqe~r~~~~nvl- 300 (346)
T PF02350_consen 233 EKLKKY--DNVRLIEP-LGYEEYLSLLKNADLVVG---DSSG-----IQEEAPSLGKPVVNIRDSGERQEGRERGSNVL- 300 (346)
T ss_dssp HHHTT---TTEEEE-----HHHHHHHHHHESEEEE---SSHH-----HHHHGGGGT--EEECSSS-S-HHHHHTTSEEE-
T ss_pred HHhccc--CCEEEECC-CCHHHHHHHHhcceEEEE---cCcc-----HHHHHHHhCCeEEEecCCCCCHHHHhhcceEE-
Confidence 455555 49999988 999999999999999997 4444 3349999999999984 566677776666656
Q ss_pred eC-CHHHHHHHHHHHHhC
Q 011969 413 FS-SSSELADQLLMLFKG 429 (474)
Q Consensus 413 ~~-~~~~la~~i~~l~~~ 429 (474)
++ |.+++.+++.++++.
T Consensus 301 v~~~~~~I~~ai~~~l~~ 318 (346)
T PF02350_consen 301 VGTDPEAIIQAIEKALSD 318 (346)
T ss_dssp ETSSHHHHHHHHHHHHH-
T ss_pred eCCCHHHHHHHHHHHHhC
Confidence 65 899999999999983
|
1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C. |
| >COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.57 E-value=1.7e-05 Score=81.47 Aligned_cols=329 Identities=16% Similarity=0.155 Sum_probs=182.1
Q ss_pred EEeCCCCCCchHHHHHHHHHhhCCCeEEEEecCCCCCCcceeccCCeEEE-EeecCCCCCCCCCchhHHHHHHHHHHHHH
Q 011969 10 VVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIH-TMTQWPTIPRGLPKVLKPVLLLLKPLIQF 88 (474)
Q Consensus 10 ~~~~~~g~~~r~~~~a~~l~~~~g~eV~Vv~~~~~~~~~~~~~~~gi~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (474)
++.|+..|.--......+|-.+.+ +|.+++-+|....+ .|++.. .+. ....-++.-+...+..+++...++
T Consensus 6 i~AGE~SGDllGa~LikaLk~~~~-~~efvGvgG~~m~a-----eG~~sl~~~~--elsvmGf~EVL~~lp~llk~~~~~ 77 (381)
T COG0763 6 LSAGEASGDLLGAGLIKALKARYP-DVEFVGVGGEKMEA-----EGLESLFDME--ELSVMGFVEVLGRLPRLLKIRREL 77 (381)
T ss_pred EEecccchhhHHHHHHHHHHhhCC-CeEEEEeccHHHHh-----ccCccccCHH--HHHHhhHHHHHHHHHHHHHHHHHH
Confidence 444555444444555667766644 99999988755432 232111 111 000111111122222222222221
Q ss_pred HHHHHHHhhhcCCCCEEEEeCCCChhHHHHHHHHHh-hCCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhhhc
Q 011969 89 FMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASS-LRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMA 167 (474)
Q Consensus 89 ~~~~~~~~~~~~~~Dvi~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~a 167 (474)
.. . + ...+||++++-+.|.+...+ ...+++ ...+|+|+.+--..| .+++-+ -..+.+..
T Consensus 78 ~~---~-i-~~~kpD~~i~IDsPdFnl~v-ak~lrk~~p~i~iihYV~PsVW--------AWr~~R------a~~i~~~~ 137 (381)
T COG0763 78 VR---Y-I-LANKPDVLILIDSPDFNLRV-AKKLRKAGPKIKIIHYVSPSVW--------AWRPKR------AVKIAKYV 137 (381)
T ss_pred HH---H-H-HhcCCCEEEEeCCCCCchHH-HHHHHHhCCCCCeEEEECccee--------eechhh------HHHHHHHh
Confidence 11 1 1 12899999998877776654 444443 346887765443211 111110 12334678
Q ss_pred CEEEEeCHHHHHHHHHHhCCceEEEeCCCCCCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhcc
Q 011969 168 NGCLCVTQAMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSL 247 (474)
Q Consensus 168 d~vi~vS~~~~~~l~~~~~~~~~vi~n~~~~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (474)
|+++|+=+...+++.+ .|.+++.+=+...+...-.+ .+...+++++
T Consensus 138 D~lLailPFE~~~y~k-~g~~~~yVGHpl~d~i~~~~--~r~~ar~~l~------------------------------- 183 (381)
T COG0763 138 DHLLAILPFEPAFYDK-FGLPCTYVGHPLADEIPLLP--DREAAREKLG------------------------------- 183 (381)
T ss_pred hHeeeecCCCHHHHHh-cCCCeEEeCChhhhhccccc--cHHHHHHHhC-------------------------------
Confidence 9999999999987777 58876666554222211111 2344667776
Q ss_pred cccccccCCCCCeEEEEEeeccc--CCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeC
Q 011969 248 AGIDVFLKPNRPALVVSSTSWTP--DEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGK 325 (474)
Q Consensus 248 ~~~~~~~~~~~~~~i~~~G~l~~--~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~ 325 (474)
+..+.+.+.+.-|+=.. .+-...+.+|+..+..+ +|++++++--.
T Consensus 184 ------~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~---------------------------~~~~~~vlp~~ 230 (381)
T COG0763 184 ------IDADEKTLALLPGSRRSEIRRLLPPFVQAAQELKAR---------------------------YPDLKFVLPLV 230 (381)
T ss_pred ------CCCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhh---------------------------CCCceEEEecC
Confidence 44566667777776432 24566777888888764 89999999776
Q ss_pred CCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEec-cccccc--
Q 011969 326 GPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS-YSCIEE-- 402 (474)
Q Consensus 326 g~~~~~~~~~~~~l~l~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~-~~~~~e-- 402 (474)
.+..+.+++...+........+ +...+-...+..||+.+. . .|++.+|++.+|+|.|.+- ...+.-
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~a~~~aD~al~---a-----SGT~tLE~aL~g~P~Vv~Yk~~~it~~i 299 (381)
T COG0763 231 NAKYRRIIEEALKWEVAGLSLI---LIDGEKRKAFAAADAALA---A-----SGTATLEAALAGTPMVVAYKVKPITYFI 299 (381)
T ss_pred cHHHHHHHHHHhhccccCceEE---ecCchHHHHHHHhhHHHH---h-----ccHHHHHHHHhCCCEEEEEeccHHHHHH
Confidence 5543333333222221012222 346788889999999997 2 3569999999999999873 222211
Q ss_pred ---ccccCC-------cE-EEeC-------CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc
Q 011969 403 ---LVKVDK-------NG-LLFS-------SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG 448 (474)
Q Consensus 403 ---~v~~~~-------~G-~l~~-------~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~ 448 (474)
.++-.. .| .+++ .++.+++++..++.+ ...++++.+...++.
T Consensus 300 ak~lvk~~yisLpNIi~~~~ivPEliq~~~~pe~la~~l~~ll~~----~~~~~~~~~~~~~l~ 359 (381)
T COG0763 300 AKRLVKLPYVSLPNILAGREIVPELIQEDCTPENLARALEELLLN----GDRREALKEKFRELH 359 (381)
T ss_pred HHHhccCCcccchHHhcCCccchHHHhhhcCHHHHHHHHHHHhcC----hHhHHHHHHHHHHHH
Confidence 111110 01 1221 388999999999985 555566666665544
|
|
| >COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.55 E-value=3.9e-05 Score=79.08 Aligned_cols=256 Identities=17% Similarity=0.189 Sum_probs=158.2
Q ss_pred CCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhhhcCEEEEeCHHHHH
Q 011969 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179 (474)
Q Consensus 100 ~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~ 179 (474)
.+||+|++|+-. .+.+++.+++.+.++|+..---+. ..+....-.. .-.+.....||.-++.|+..++
T Consensus 91 ~kPD~VlVhGDT--~t~lA~alaa~~~~IpV~HvEAGl-------Rt~~~~~PEE---~NR~l~~~~S~~hfapte~ar~ 158 (383)
T COG0381 91 EKPDLVLVHGDT--NTTLAGALAAFYLKIPVGHVEAGL-------RTGDLYFPEE---INRRLTSHLSDLHFAPTEIARK 158 (383)
T ss_pred hCCCEEEEeCCc--chHHHHHHHHHHhCCceEEEeccc-------ccCCCCCcHH---HHHHHHHHhhhhhcCChHHHHH
Confidence 899999999853 344456788888889965432222 1111110011 1223455688999999999999
Q ss_pred HHHHHhCCc---eEEEeCCCCCCCCCCChH--HHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhccccccccc
Q 011969 180 ELAQNWGIK---ATVLYDQPPEFFHPTSLE--EKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFL 254 (474)
Q Consensus 180 ~l~~~~~~~---~~vi~n~~~~~f~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (474)
.|.+. |.+ +.++=|...+........ +.......+ -.
T Consensus 159 nLl~E-G~~~~~IfvtGnt~iDal~~~~~~~~~~~~~~~~~-------------------------------------~~ 200 (383)
T COG0381 159 NLLRE-GVPEKRIFVTGNTVIDALLNTRDRVLEDSKILAKG-------------------------------------LD 200 (383)
T ss_pred HHHHc-CCCccceEEeCChHHHHHHHHHhhhccchhhHHhh-------------------------------------hc
Confidence 98885 655 333322211111111000 000000000 01
Q ss_pred CCCCCeEEEEEeeccc-CCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCChHHHH
Q 011969 255 KPNRPALVVSSTSWTP-DEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYE 333 (474)
Q Consensus 255 ~~~~~~~i~~~G~l~~-~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~~~ 333 (474)
..++.++++..-|-.. .+++..+.+++..+.++ ++++.++.--. +. ..++
T Consensus 201 ~~~~~~iLvT~HRreN~~~~~~~i~~al~~i~~~---------------------------~~~~~viyp~H-~~-~~v~ 251 (383)
T COG0381 201 DKDKKYILVTAHRRENVGEPLEEICEALREIAEE---------------------------YPDVIVIYPVH-PR-PRVR 251 (383)
T ss_pred cccCcEEEEEcchhhcccccHHHHHHHHHHHHHh---------------------------CCCceEEEeCC-CC-hhhh
Confidence 1233445555544433 27888888988888774 56666655442 22 4455
Q ss_pred HHH-HHcCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEec-ccccccccccCCcE
Q 011969 334 EKI-RRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS-YSCIEELVKVDKNG 410 (474)
Q Consensus 334 ~~~-~~l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~-~~~~~e~v~~~~~G 410 (474)
+.. +.++- ++|.++.+ +...++..++..|-+.+- .|.| -.=||-..|+||++-. ...-+|.++.+ +-
T Consensus 252 e~~~~~L~~~~~v~li~p-l~~~~f~~L~~~a~~ilt---DSGg-----iqEEAp~lg~Pvl~lR~~TERPE~v~ag-t~ 321 (383)
T COG0381 252 ELVLKRLKNVERVKLIDP-LGYLDFHNLMKNAFLILT---DSGG-----IQEEAPSLGKPVLVLRDTTERPEGVEAG-TN 321 (383)
T ss_pred HHHHHHhCCCCcEEEeCC-cchHHHHHHHHhceEEEe---cCCc-----hhhhHHhcCCcEEeeccCCCCccceecC-ce
Confidence 555 55554 58999998 999999999999966664 5544 4679999999999986 56667766443 44
Q ss_pred EEeC-CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc
Q 011969 411 LLFS-SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG 448 (474)
Q Consensus 411 ~l~~-~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~ 448 (474)
.++. +.+.+.+++..++++ ++.+++|++..--++
T Consensus 322 ~lvg~~~~~i~~~~~~ll~~----~~~~~~m~~~~npYg 356 (383)
T COG0381 322 ILVGTDEENILDAATELLED----EEFYERMSNAKNPYG 356 (383)
T ss_pred EEeCccHHHHHHHHHHHhhC----hHHHHHHhcccCCCc
Confidence 5554 789999999999995 778888877665554
|
|
| >PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria | Back alignment and domain information |
|---|
Probab=98.52 E-value=2.5e-06 Score=88.30 Aligned_cols=219 Identities=13% Similarity=0.194 Sum_probs=108.8
Q ss_pred hhCCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhhhcCEEEEeCHHHHHHHHHHhCCc-eEEEeCCCC--C-C
Q 011969 124 SLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQNWGIK-ATVLYDQPP--E-F 199 (474)
Q Consensus 124 ~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~~l~~~~~~~-~~vi~n~~~--~-~ 199 (474)
...+.++|..||+.+................ ......+..|.+++.|+.+++.+.+.++.+ -.++..|-| + .
T Consensus 96 ~~~~~~~i~lwHG~~~K~~g~~~~~~~~~~~----~~~~~~~~~d~~~~~s~~~~~~~~~~f~~~~~~i~~~G~PR~D~l 171 (369)
T PF04464_consen 96 KRKNQKYIQLWHGIPLKKIGYDSPDNKNYRK----NYKRNYRNYDYFIVSSEFEKEIFKKAFGYPEDKILVTGYPRNDYL 171 (369)
T ss_dssp --TTSEEEE--SS--SB--GGG-S---TS-H----HHHHHHTT-SEEEESSHHHHHHHHHHTT--GGGEEES--GGGHHH
T ss_pred cCCCcEEEEecCCCcccccchhccccccchh----hhhhhccCCcEEEECCHHHHHHHHHHhccCcceEEEeCCCeEhHH
Confidence 4567889999999853322211111110001 222344678999999999999999888876 355566643 1 2
Q ss_pred CCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhcccccccccCCCCCeEEEEEeecccCCCH-----
Q 011969 200 FHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDF----- 274 (474)
Q Consensus 200 f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~l~~~k~~----- 274 (474)
+.... .....+.+.++ +..++. +|+|+-+|.....-
T Consensus 172 ~~~~~-~~~~~i~~~~~-------------------------------------~~~~~k-~ILyaPT~R~~~~~~~~~~ 212 (369)
T PF04464_consen 172 FNKSK-ENRNRIKKKLG-------------------------------------IDKDKK-VILYAPTWRDNSSNEYFKF 212 (369)
T ss_dssp HHSTT--HHHHHHHHTT---------------------------------------SS-E-EEEEE----GGG--GGSS-
T ss_pred hccCH-HHHHHHHHHhc-------------------------------------cCCCCc-EEEEeeccccccccccccc
Confidence 22222 12344555554 223333 88888766554332
Q ss_pred -HH--HHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCChHHHHHHHHH-cCC-CcEEEecC
Q 011969 275 -GI--LLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRR-LRL-KRVAFRTM 349 (474)
Q Consensus 275 -~~--Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~~~-l~l-~~V~f~g~ 349 (474)
.. -.+.+..+ ..+++.+++-..... ...... ... ++|.+...
T Consensus 213 ~~~~~~~~~l~~~-----------------------------~~~~~~li~k~Hp~~----~~~~~~~~~~~~~i~~~~~ 259 (369)
T PF04464_consen 213 FFSDLDFEKLNFL-----------------------------LKNNYVLIIKPHPNM----KKKFKDFKEDNSNIIFVSD 259 (369)
T ss_dssp ---TT-HHHHHHH-----------------------------HTTTEEEEE--SHHH----HTT----TT-TTTEEE-TT
T ss_pred cccccCHHHHHHH-----------------------------hCCCcEEEEEeCchh----hhchhhhhccCCcEEECCC
Confidence 11 11222211 146788888775321 222221 222 58888765
Q ss_pred CCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEe--ccc------ccccccccCCcEEEeCCHHHHHH
Q 011969 350 WLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV--SYS------CIEELVKVDKNGLLFSSSSELAD 421 (474)
Q Consensus 350 ~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~--~~~------~~~e~v~~~~~G~l~~~~~~la~ 421 (474)
.+++..++..||++|. . ++..++|++.+++|||.- |.. |...-..+...|-++.+.++|.+
T Consensus 260 ---~~~~~~ll~~aDiLIT---D-----ySSi~fD~~~l~KPiify~~D~~~Y~~~rg~~~~~~~~~pg~~~~~~~eL~~ 328 (369)
T PF04464_consen 260 ---NEDIYDLLAAADILIT---D-----YSSIIFDFLLLNKPIIFYQPDLEEYEKERGFYFDYEEDLPGPIVYNFEELIE 328 (369)
T ss_dssp ----S-HHHHHHT-SEEEE---S-----S-THHHHHGGGT--EEEE-TTTTTTTTTSSBSS-TTTSSSS-EESSHHHHHH
T ss_pred ---CCCHHHHHHhcCEEEE---e-----chhHHHHHHHhCCCEEEEeccHHHHhhccCCCCchHhhCCCceeCCHHHHHH
Confidence 6699999999999997 2 334899999999999965 321 11111234456788889999999
Q ss_pred HHHHHHhC
Q 011969 422 QLLMLFKG 429 (474)
Q Consensus 422 ~i~~l~~~ 429 (474)
+|..++++
T Consensus 329 ~i~~~~~~ 336 (369)
T PF04464_consen 329 AIENIIEN 336 (369)
T ss_dssp HHTTHHHH
T ss_pred HHHhhhhC
Confidence 99998875
|
They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D. |
| >PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.43 E-value=0.00016 Score=77.69 Aligned_cols=158 Identities=15% Similarity=0.135 Sum_probs=96.5
Q ss_pred eEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCC---------hH
Q 011969 260 ALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD---------KE 330 (474)
Q Consensus 260 ~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~---------~~ 330 (474)
.+|+.+.++...||+..=++|+..+.++ .+....++.|+=++.... ++
T Consensus 277 ~ii~gvDrld~~kGi~~kl~Afe~fL~~-----------------------~P~~~~kv~liQi~~psr~~~~~y~~~~~ 333 (474)
T PF00982_consen 277 KIIVGVDRLDYTKGIPEKLRAFERFLER-----------------------YPEYRGKVVLIQIAVPSREDVPEYQELRR 333 (474)
T ss_dssp EEEEEE--B-GGG-HHHHHHHHHHHHHH------------------------GGGTTTEEEEEE--B-STTSHHHHHHHH
T ss_pred EEEEEeccchhhcCHHHHHHHHHHHHHh-----------------------CcCccCcEEEEEEeeccCccchhHHHHHH
Confidence 3899999999999999999999988764 112234678876664221 13
Q ss_pred HHHHHHHHc----CC---CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCc----EEEecccc
Q 011969 331 SYEEKIRRL----RL---KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLP----VCAVSYSC 399 (474)
Q Consensus 331 ~~~~~~~~l----~l---~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~P----Via~~~~~ 399 (474)
++++.+.+. |- .-|.++..-++.+++..+|+.||+++. ++..+|+-++..|+.+|..+ +|.|..+|
T Consensus 334 ~v~~~v~~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~aDv~lv---TslrDGmNLva~Eyva~q~~~~GvLiLSefaG 410 (474)
T PF00982_consen 334 EVEELVGRINGKYGTPDWTPIIYIYRSLSFEELLALYRAADVALV---TSLRDGMNLVAKEYVACQDDNPGVLILSEFAG 410 (474)
T ss_dssp HHHHHHHHHHHHH-BTTB-SEEEE-S---HHHHHHHHHH-SEEEE-----SSBS--HHHHHHHHHS-TS--EEEEETTBG
T ss_pred HHHHHHHHHHhhcccCCceeEEEEecCCCHHHHHHHHHhhhhEEe---cchhhccCCcceEEEEEecCCCCceEeeccCC
Confidence 344444333 32 136666555999999999999999999 88888999999999999876 66777777
Q ss_pred cccccccCCcEEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc
Q 011969 400 IEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG 448 (474)
Q Consensus 400 ~~e~v~~~~~G~l~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~ 448 (474)
..+.+.+ ..++++ |++++|++|.+.++. .+++++...+..++..
T Consensus 411 aa~~L~~--~al~VNP~d~~~~A~ai~~AL~M---~~~Er~~r~~~~~~~v 456 (474)
T PF00982_consen 411 AAEQLSE--AALLVNPWDIEEVADAIHEALTM---PPEERKERHARLREYV 456 (474)
T ss_dssp GGGT-TT--S-EEE-TT-HHHHHHHHHHHHT-----HHHHHHHHHHHHHHH
T ss_pred HHHHcCC--ccEEECCCChHHHHHHHHHHHcC---CHHHHHHHHHHHHHHh
Confidence 7777633 226665 899999999999986 4555555444444444
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B. |
| >PRK10117 trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Probab=98.40 E-value=0.00014 Score=77.61 Aligned_cols=165 Identities=7% Similarity=0.047 Sum_probs=115.4
Q ss_pred EEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCC-----C----hHH
Q 011969 261 LVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP-----D----KES 331 (474)
Q Consensus 261 ~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~-----~----~~~ 331 (474)
+|+.+.|+...||+..=++|+..+.++ ++....++.|+-+.... + +.+
T Consensus 257 lilgVDRLDytKGi~~rl~Afe~fL~~-----------------------~Pe~~gkvvlvQia~psR~~v~~Y~~l~~~ 313 (474)
T PRK10117 257 NIFSVERLDYSKGLPERFLAYEALLEK-----------------------YPQHHGKIRYTQIAPTSRGDVQAYQDIRHQ 313 (474)
T ss_pred EEEEecccccccCHHHHHHHHHHHHHh-----------------------ChhhcCCEEEEEEcCCCCCccHHHHHHHHH
Confidence 889999999999999999999988763 11123457777665322 1 123
Q ss_pred HHHHHHHcCC-------CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCC-----cEEEecccc
Q 011969 332 YEEKIRRLRL-------KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGL-----PVCAVSYSC 399 (474)
Q Consensus 332 ~~~~~~~l~l-------~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~-----PVia~~~~~ 399 (474)
+++.+.+.+- .-|.++..-++.+++..+|+.||+++. ++..+|+-++-.||.||.. .+|-|...|
T Consensus 314 v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~alyr~ADv~lV---TplRDGMNLVAkEyva~q~~~~~GvLILSefAG 390 (474)
T PRK10117 314 LETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLV---TPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAG 390 (474)
T ss_pred HHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHHHHhccEEEe---cccccccccccchheeeecCCCCccEEEecccc
Confidence 3444444321 137777666899999999999999999 7888888889999999976 377788877
Q ss_pred cccccccCCcEEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhcc---ccchHHHH
Q 011969 400 IEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGL---SARWATEW 457 (474)
Q Consensus 400 ~~e~v~~~~~G~l~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~w~~~~ 457 (474)
.++.+. ..++++ |.++++++|...+.. ..+++++-.+..++... ...|....
T Consensus 391 aA~~L~---~AllVNP~d~~~~A~Ai~~AL~M---p~~Er~~R~~~l~~~v~~~dv~~W~~~f 447 (474)
T PRK10117 391 AANELT---SALIVNPYDRDEVAAALDRALTM---PLAERISRHAEMLDVIVKNDINHWQECF 447 (474)
T ss_pred hHHHhC---CCeEECCCCHHHHHHHHHHHHcC---CHHHHHHHHHHHHHHhhhCCHHHHHHHH
Confidence 777773 246665 899999999999986 44544443333333332 33455544
|
|
| >PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.37 E-value=0.00021 Score=74.50 Aligned_cols=236 Identities=19% Similarity=0.204 Sum_probs=140.1
Q ss_pred cCCCCEEEEeCCCChhHHHHHHHHHhhC-CCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhhhcCEEEEeCHHH
Q 011969 99 IASPDVFLVQNPPSVPTLVAVKWASSLR-RSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAM 177 (474)
Q Consensus 99 ~~~~Dvi~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~ 177 (474)
..+||+++.-+.|.+..- +++.+++.. +.|+|+.+----| -.+... -+.+.+..|.++|+=+..
T Consensus 80 ~~~pd~vIlID~pgFNlr-lak~lk~~~~~~~viyYI~PqvW------AWr~~R--------~~~i~~~~D~ll~ifPFE 144 (373)
T PF02684_consen 80 EEKPDVVILIDYPGFNLR-LAKKLKKRGIPIKVIYYISPQVW------AWRPGR--------AKKIKKYVDHLLVIFPFE 144 (373)
T ss_pred HcCCCEEEEeCCCCccHH-HHHHHHHhCCCceEEEEECCcee------eeCccH--------HHHHHHHHhheeECCccc
Confidence 389999998887776554 355444432 2346665432110 001111 123346789999999998
Q ss_pred HHHHHHHhCCceEEEeCCCCCCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhcccccccccCCC
Q 011969 178 QHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKPN 257 (474)
Q Consensus 178 ~~~l~~~~~~~~~vi~n~~~~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (474)
.+++.+ +|.+++.+=++-.+...+... ....++.+ ++++
T Consensus 145 ~~~y~~-~g~~~~~VGHPl~d~~~~~~~--~~~~~~~~--------------------------------------l~~~ 183 (373)
T PF02684_consen 145 PEFYKK-HGVPVTYVGHPLLDEVKPEPD--RAEAREKL--------------------------------------LDPD 183 (373)
T ss_pred HHHHhc-cCCCeEEECCcchhhhccCCC--HHHHHHhc--------------------------------------CCCC
Confidence 877777 588766665543333323221 11111111 2356
Q ss_pred CCeEEEEEeeccc--CCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCChHH-HHH
Q 011969 258 RPALVVSSTSWTP--DEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKES-YEE 334 (474)
Q Consensus 258 ~~~~i~~~G~l~~--~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~-~~~ 334 (474)
.+.+.+.-||=.. .+....+++++..+.++ +|++++++.......++ +++
T Consensus 184 ~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~~---------------------------~p~l~fvvp~a~~~~~~~i~~ 236 (373)
T PF02684_consen 184 KPIIALLPGSRKSEIKRLLPIFLEAAKLLKKQ---------------------------RPDLQFVVPVAPEVHEELIEE 236 (373)
T ss_pred CcEEEEeCCCCHHHHHHHHHHHHHHHHHHHHh---------------------------CCCeEEEEecCCHHHHHHHHH
Confidence 6666666666332 35668888999988874 79999998875544443 444
Q ss_pred HHHHcCCCcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEec-ccccc-----cccccCC
Q 011969 335 KIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS-YSCIE-----ELVKVDK 408 (474)
Q Consensus 335 ~~~~l~l~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~-~~~~~-----e~v~~~~ 408 (474)
.....+. ++...- ...+-...++.||+.+. .| |++.+|++.+|+|.|..- .+.+. -+++...
T Consensus 237 ~~~~~~~-~~~~~~---~~~~~~~~m~~ad~al~---~S-----GTaTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~~~ 304 (373)
T PF02684_consen 237 ILAEYPP-DVSIVI---IEGESYDAMAAADAALA---AS-----GTATLEAALLGVPMVVAYKVSPLTYFIAKRLVKVKY 304 (373)
T ss_pred HHHhhCC-CCeEEE---cCCchHHHHHhCcchhh---cC-----CHHHHHHHHhCCCEEEEEcCcHHHHHHHHHhhcCCE
Confidence 4444433 233331 14677889999999998 22 459999999999999763 22111 1111111
Q ss_pred cEE--------Ee-----C--CHHHHHHHHHHHHhC
Q 011969 409 NGL--------LF-----S--SSSELADQLLMLFKG 429 (474)
Q Consensus 409 ~G~--------l~-----~--~~~~la~~i~~l~~~ 429 (474)
.|+ ++ + +++.+++++..++.+
T Consensus 305 isL~Niia~~~v~PEliQ~~~~~~~i~~~~~~ll~~ 340 (373)
T PF02684_consen 305 ISLPNIIAGREVVPELIQEDATPENIAAELLELLEN 340 (373)
T ss_pred eechhhhcCCCcchhhhcccCCHHHHHHHHHHHhcC
Confidence 111 11 1 589999999999985
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process |
| >PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=98.24 E-value=0.00011 Score=80.28 Aligned_cols=245 Identities=12% Similarity=0.077 Sum_probs=141.6
Q ss_pred CCCCEEEEeCCCChhHHHHHHHHHhhCC--CcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhhhcCEEEEeCHHH
Q 011969 100 ASPDVFLVQNPPSVPTLVAVKWASSLRR--SAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAM 177 (474)
Q Consensus 100 ~~~Dvi~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~ 177 (474)
.+||++++-+.|.+..- +++.+++. | +|+++.+----+ --+.+.. +.+.+..|.++|.=+..
T Consensus 309 ~kPD~vIlID~PgFNlr-LAK~lkk~-Gi~ipviyYVsPqVW------AWR~~Ri--------kki~k~vD~ll~IfPFE 372 (608)
T PRK01021 309 TNPRTVICIDFPDFHFL-LIKKLRKR-GYKGKIVHYVCPSIW------AWRPKRK--------TILEKYLDLLLLILPFE 372 (608)
T ss_pred cCCCEEEEeCCCCCCHH-HHHHHHhc-CCCCCEEEEECccce------eeCcchH--------HHHHHHhhhheecCccC
Confidence 79999998887776554 45655544 5 487765432211 0111111 23346789999999999
Q ss_pred HHHHHHHhCCceEEEeCCCCCCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhcccccccccCCC
Q 011969 178 QHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKPN 257 (474)
Q Consensus 178 ~~~l~~~~~~~~~vi~n~~~~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (474)
.+.+++ .|.+++.+=++-.+...+.. .+.+.++++| ++++
T Consensus 373 ~~~y~~-~gv~v~yVGHPL~d~i~~~~--~~~~~r~~lg-------------------------------------l~~~ 412 (608)
T PRK01021 373 QNLFKD-SPLRTVYLGHPLVETISSFS--PNLSWKEQLH-------------------------------------LPSD 412 (608)
T ss_pred HHHHHh-cCCCeEEECCcHHhhcccCC--CHHHHHHHcC-------------------------------------CCCC
Confidence 988877 58887766554323322111 2234455655 3355
Q ss_pred CCeEEEEEeeccc--CCCHHHHHHHHH--HhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCC-hHHH
Q 011969 258 RPALVVSSTSWTP--DEDFGILLEAAL--MYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD-KESY 332 (474)
Q Consensus 258 ~~~~i~~~G~l~~--~k~~~~Li~a~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~-~~~~ 332 (474)
.+.+.+.-|+=.. .+....+++|++ .+ .++.++++....+. .+.+
T Consensus 413 ~~iIaLLPGSR~~EI~rllPv~l~aa~~~~l------------------------------~~~l~fvvp~a~~~~~~~i 462 (608)
T PRK01021 413 KPIVAAFPGSRRGDILRNLTIQVQAFLASSL------------------------------ASTHQLLVSSANPKYDHLI 462 (608)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHHHHHHHHh------------------------------ccCeEEEEecCchhhHHHH
Confidence 6656666665322 245667777776 32 13577777543322 3455
Q ss_pred HHHHHHcCCCcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEec-ccccc----------
Q 011969 333 EEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS-YSCIE---------- 401 (474)
Q Consensus 333 ~~~~~~l~l~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~-~~~~~---------- 401 (474)
++..+..+.-.+.+... ++-.++++.||+.+. .| |++.+|++.+|+|.|..- .+.+.
T Consensus 463 ~~~~~~~~~~~~~ii~~----~~~~~~m~aaD~aLa---aS-----GTaTLEaAL~g~PmVV~YK~s~Lty~Iak~Lvki 530 (608)
T PRK01021 463 LEVLQQEGCLHSHIVPS----QFRYELMRECDCALA---KC-----GTIVLETALNQTPTIVTCQLRPFDTFLAKYIFKI 530 (608)
T ss_pred HHHHhhcCCCCeEEecC----cchHHHHHhcCeeee---cC-----CHHHHHHHHhCCCEEEEEecCHHHHHHHHHHHhc
Confidence 66554433213344422 234789999999998 22 469999999999999853 22111
Q ss_pred --------cccccCC--cEEE---eC-CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHh
Q 011969 402 --------ELVKVDK--NGLL---FS-SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEM 447 (474)
Q Consensus 402 --------e~v~~~~--~G~l---~~-~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~ 447 (474)
.++.+.. --++ .+ +++.+++++ .++.+ ++.++++++...+.
T Consensus 531 ~i~yIsLpNIIagr~VvPEllqgQ~~~tpe~La~~l-~lL~d----~~~r~~~~~~l~~l 585 (608)
T PRK01021 531 ILPAYSLPNIILGSTIFPEFIGGKKDFQPEEVAAAL-DILKT----SQSKEKQKDACRDL 585 (608)
T ss_pred cCCeeehhHHhcCCCcchhhcCCcccCCHHHHHHHH-HHhcC----HHHHHHHHHHHHHH
Confidence 1111111 1233 12 589999986 77764 66666766666553
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=98.23 E-value=0.0012 Score=75.62 Aligned_cols=141 Identities=6% Similarity=0.003 Sum_probs=101.7
Q ss_pred eEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCC-----CCh----H
Q 011969 260 ALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKG-----PDK----E 330 (474)
Q Consensus 260 ~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g-----~~~----~ 330 (474)
.+++.+.++..-||+..=+.|+..+.++ .+....++.|+-+... ++. .
T Consensus 340 ~~ilgVDrlD~~KGi~~kl~A~e~~L~~-----------------------~P~~~gkvvlvQia~psr~~~~~y~~~~~ 396 (854)
T PLN02205 340 IMLLGVDDMDIFKGISLKLLAMEQLLMQ-----------------------HPEWQGKVVLVQIANPARGKGKDVKEVQA 396 (854)
T ss_pred EEEEEccCcccccCHHHHHHHHHHHHHh-----------------------CccccCCEEEEEEecCCCcccHHHHHHHH
Confidence 3899999999999999999999988763 1111234566655532 222 2
Q ss_pred HHHHHHHHc----CC---CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCC-------------
Q 011969 331 SYEEKIRRL----RL---KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGL------------- 390 (474)
Q Consensus 331 ~~~~~~~~l----~l---~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~------------- 390 (474)
++++.+.+. |- .-|.++..-++.+++..+|+.||+++. ++..+|+-++..||.+|..
T Consensus 397 ev~~~v~rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~ADv~lV---T~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~ 473 (854)
T PLN02205 397 ETHSTVKRINETFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLV---TAVRDGMNLIPYEYIISRQGNEKLDKLLGLEP 473 (854)
T ss_pred HHHHHHHHHHhhcCCCCCceEEEEecCCCHHHHHHHHHhccEEEe---ccccccccccchheeEEccCcccccccccccc
Confidence 333444432 21 247777665899999999999999999 7888888889999999864
Q ss_pred ------cEEEecccccccccccCCcEEEeC--CHHHHHHHHHHHHhC
Q 011969 391 ------PVCAVSYSCIEELVKVDKNGLLFS--SSSELADQLLMLFKG 429 (474)
Q Consensus 391 ------PVia~~~~~~~e~v~~~~~G~l~~--~~~~la~~i~~l~~~ 429 (474)
.+|.|...|.+..+. ..++++ |+++++++|...+..
T Consensus 474 ~~~~~gvLiLSEfaGaa~~L~---~Ai~VNP~d~~~~a~ai~~AL~m 517 (854)
T PLN02205 474 STPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIDAVADAMDSALEM 517 (854)
T ss_pred ccCCCCceEeeeccchhHHhC---cCeEECCCCHHHHHHHHHHHHcC
Confidence 256666666555552 245665 799999999999986
|
|
| >PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length | Back alignment and domain information |
|---|
Probab=98.16 E-value=0.00044 Score=71.11 Aligned_cols=277 Identities=19% Similarity=0.176 Sum_probs=148.3
Q ss_pred HHHHHHhhCCCeEEEEecCCCCCCcceeccCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcCCCC
Q 011969 24 QALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPD 103 (474)
Q Consensus 24 ~a~~l~~~~g~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 103 (474)
.+..|-++ ||+|.|.+-..... .++++..|+++..+..+. .+...+.+..+.+ ...++ .+.. ..+||
T Consensus 19 ~I~eL~~~-GheV~it~R~~~~~-~~LL~~yg~~y~~iG~~g-----~~~~~Kl~~~~~R----~~~l~-~~~~-~~~pD 85 (335)
T PF04007_consen 19 IIRELEKR-GHEVLITARDKDET-EELLDLYGIDYIVIGKHG-----DSLYGKLLESIER----QYKLL-KLIK-KFKPD 85 (335)
T ss_pred HHHHHHhC-CCEEEEEEeccchH-HHHHHHcCCCeEEEcCCC-----CCHHHHHHHHHHH----HHHHH-HHHH-hhCCC
Confidence 34666665 99999999665432 367778899999887221 1111222222211 11122 2222 27899
Q ss_pred EEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhhhcCEEEEeCHHHHHHHHH
Q 011969 104 VFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQ 183 (474)
Q Consensus 104 vi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~~l~~ 183 (474)
++++.+.+ . +..++...|+|.|.-..+- ... ...+.....||.+++..---...+.
T Consensus 86 v~is~~s~---~---a~~va~~lgiP~I~f~D~e-~a~----------------~~~~Lt~Pla~~i~~P~~~~~~~~~- 141 (335)
T PF04007_consen 86 VAISFGSP---E---AARVAFGLGIPSIVFNDTE-HAI----------------AQNRLTLPLADVIITPEAIPKEFLK- 141 (335)
T ss_pred EEEecCcH---H---HHHHHHHhCCCeEEEecCc-hhh----------------ccceeehhcCCeeECCcccCHHHHH-
Confidence 99987732 1 2344678889988765543 100 0112334578888877654443333
Q ss_pred HhCCceEEE-eCCCC-----CCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhcccccccccCCC
Q 011969 184 NWGIKATVL-YDQPP-----EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKPN 257 (474)
Q Consensus 184 ~~~~~~~vi-~n~~~-----~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (474)
++|.+-.+. ++|.. ..|.|. .++++++|. . +
T Consensus 142 ~~G~~~~i~~y~G~~E~ayl~~F~Pd-----~~vl~~lg~-------------------------------------~-~ 178 (335)
T PF04007_consen 142 RFGAKNQIRTYNGYKELAYLHPFKPD-----PEVLKELGL-------------------------------------D-D 178 (335)
T ss_pred hcCCcCCEEEECCeeeEEeecCCCCC-----hhHHHHcCC-------------------------------------C-C
Confidence 356652233 66632 124443 455566661 1 2
Q ss_pred CCeEEEEEeecc--cCC-CHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCChHHHHH
Q 011969 258 RPALVVSSTSWT--PDE-DFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEE 334 (474)
Q Consensus 258 ~~~~i~~~G~l~--~~k-~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~ 334 (474)
.+++++=...+. ... .-+.+-+.+..+.+ ..+. ++++....+.. +
T Consensus 179 ~~yIvvR~~~~~A~y~~~~~~i~~~ii~~L~~----------------------------~~~~-vV~ipr~~~~~---~ 226 (335)
T PF04007_consen 179 EPYIVVRPEAWKASYDNGKKSILPEIIEELEK----------------------------YGRN-VVIIPRYEDQR---E 226 (335)
T ss_pred CCEEEEEeccccCeeecCccchHHHHHHHHHh----------------------------hCce-EEEecCCcchh---h
Confidence 333333111111 011 12334455555555 2334 55555443322 2
Q ss_pred HHHHcCCCcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEeccc---ccccccccCCcEE
Q 011969 335 KIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS---CIEELVKVDKNGL 411 (474)
Q Consensus 335 ~~~~l~l~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~---~~~e~v~~~~~G~ 411 (474)
..++++ +.+... .-+...++..||++|- . | |.-..||..+|+|.|.+.-+ +..+.+.+ .|+
T Consensus 227 ~~~~~~---~~i~~~---~vd~~~Ll~~a~l~Ig----~-g---gTMa~EAA~LGtPaIs~~~g~~~~vd~~L~~--~Gl 290 (335)
T PF04007_consen 227 LFEKYG---VIIPPE---PVDGLDLLYYADLVIG----G-G---GTMAREAALLGTPAISCFPGKLLAVDKYLIE--KGL 290 (335)
T ss_pred HHhccC---ccccCC---CCCHHHHHHhcCEEEe----C-C---cHHHHHHHHhCCCEEEecCCcchhHHHHHHH--CCC
Confidence 233332 444433 4466789999999996 2 2 34679999999999987432 33344433 355
Q ss_pred Ee--CCHHHHHHHHHHHHh
Q 011969 412 LF--SSSSELADQLLMLFK 428 (474)
Q Consensus 412 l~--~~~~~la~~i~~l~~ 428 (474)
+. .|++++.+.+.....
T Consensus 291 l~~~~~~~ei~~~v~~~~~ 309 (335)
T PF04007_consen 291 LYHSTDPDEIVEYVRKNLG 309 (335)
T ss_pred eEecCCHHHHHHHHHHhhh
Confidence 55 579988886666544
|
They are found in archaea and some bacteria and have no known function. |
| >COG4641 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=98.13 E-value=0.0002 Score=73.37 Aligned_cols=112 Identities=16% Similarity=0.257 Sum_probs=89.8
Q ss_pred CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCC---CchHHHHHHhcCCcEEEecccccccccccCCcEEEeCCHHH
Q 011969 342 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLD---LPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSE 418 (474)
Q Consensus 342 ~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~---~p~kv~Eama~G~PVia~~~~~~~e~v~~~~~G~l~~~~~~ 418 (474)
+++...|...+...++..++..|+.+.-.+.+.-++ +++.++|+++||.|.++....+++-.+.+++.-++..|..+
T Consensus 237 ~~~~yIg~~~~~~~v~~~~~~~~~~~n~~r~~~~~~l~~~~~RvFeiagc~~~liT~~~~~~e~~f~pgk~~iv~~d~kd 316 (373)
T COG4641 237 PNVQYIGYYNPKDGVPNAFKRDDVTLNINRASIANALFSPTNRVFEIAGCGGFLITDYWKDLEKFFKPGKDIIVYQDSKD 316 (373)
T ss_pred chhhhhhccCccchhhhcccccceeeeecHHHHHhhcCCchhhHHHHhhcCCccccccHHHHHHhcCCchheEEecCHHH
Confidence 467777763445899999999999998544442233 48999999999999999999999999988888888889999
Q ss_pred HHHHHHHHHhCCCCCHHHHHHHHHHHHHhc-cccchHHHH
Q 011969 419 LADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARWATEW 457 (474)
Q Consensus 419 la~~i~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~ 457 (474)
+.+++..++.+ ++.++++.+++.+-. .+++.++.-
T Consensus 317 l~~~~~yll~h----~~erkeiae~~ye~V~~~ht~~~r~ 352 (373)
T COG4641 317 LKEKLKYLLNH----PDERKEIAECAYERVLARHTYEERI 352 (373)
T ss_pred HHHHHHHHhcC----cchHHHHHHhhHHHHHHhccHHHHH
Confidence 99999999998 778999999998744 345555544
|
|
| >COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.13 E-value=0.00022 Score=75.27 Aligned_cols=126 Identities=17% Similarity=0.184 Sum_probs=85.0
Q ss_pred CCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCChHHHHH
Q 011969 255 KPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEE 334 (474)
Q Consensus 255 ~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~ 334 (474)
..++|.+.+..|+.... ..+++.+..... .-+.++++...+.. .
T Consensus 234 ~~d~~~vyvslGt~~~~---~~l~~~~~~a~~----------------------------~l~~~vi~~~~~~~-~---- 277 (406)
T COG1819 234 PADRPIVYVSLGTVGNA---VELLAIVLEALA----------------------------DLDVRVIVSLGGAR-D---- 277 (406)
T ss_pred cCCCCeEEEEcCCcccH---HHHHHHHHHHHh----------------------------cCCcEEEEeccccc-c----
Confidence 45677677777777655 444444443333 13566766664311 1
Q ss_pred HHHHcCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecc----cccccccccCCc
Q 011969 335 KIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY----SCIEELVKVDKN 409 (474)
Q Consensus 335 ~~~~l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~----~~~~e~v~~~~~ 409 (474)
..-++ +|+...+. +|+.+ ++..||++|+. ...+ .+.||+.+|+|+|+-.. ...++-++.-+.
T Consensus 278 --~~~~~p~n~~v~~~-~p~~~---~l~~ad~vI~h--GG~g-----tt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~G~ 344 (406)
T COG1819 278 --TLVNVPDNVIVADY-VPQLE---LLPRADAVIHH--GGAG-----TTSEALYAGVPLVVIPDGADQPLNAERVEELGA 344 (406)
T ss_pred --ccccCCCceEEecC-CCHHH---HhhhcCEEEec--CCcc-----hHHHHHHcCCCEEEecCCcchhHHHHHHHHcCC
Confidence 11223 57888765 66655 89999999982 1233 89999999999999753 345566777888
Q ss_pred EEEeC----CHHHHHHHHHHHHhC
Q 011969 410 GLLFS----SSSELADQLLMLFKG 429 (474)
Q Consensus 410 G~l~~----~~~~la~~i~~l~~~ 429 (474)
|.... +.+.+++++++++.+
T Consensus 345 G~~l~~~~l~~~~l~~av~~vL~~ 368 (406)
T COG1819 345 GIALPFEELTEERLRAAVNEVLAD 368 (406)
T ss_pred ceecCcccCCHHHHHHHHHHHhcC
Confidence 97764 599999999999995
|
|
| >COG4671 Predicted glycosyl transferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.13 E-value=0.00059 Score=69.44 Aligned_cols=333 Identities=15% Similarity=0.143 Sum_probs=169.0
Q ss_pred CCCceEEEEEe--CCCCCCchHHHHHHHHHhh-CCCeEEEEecCCCCCCcceeccCCeEEEEeecCCCCCCCCCc---hh
Q 011969 2 GRRGRACVVVL--GDLGRSPRMQYQALSLARQ-MSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPK---VL 75 (474)
Q Consensus 2 ~~~~~~~i~~~--~~~g~~~r~~~~a~~l~~~-~g~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~---~~ 75 (474)
.+++|+++.+- -.+|+--|....|.+|.+. .|.+|.+|+-... ........||++.++|.-.....+... .-
T Consensus 7 ~~~~Ri~~Yshd~~GlGHlrR~~~Ia~aLv~d~~~~~Il~IsG~~~--~~~F~~~~gVd~V~LPsl~k~~~G~~~~~d~~ 84 (400)
T COG4671 7 SKRPRILFYSHDLLGLGHLRRALRIAHALVEDYLGFDILIISGGPP--AGGFPGPAGVDFVKLPSLIKGDNGEYGLVDLD 84 (400)
T ss_pred hccceEEEEehhhccchHHHHHHHHHHHHhhcccCceEEEEeCCCc--cCCCCCcccCceEecCceEecCCCceeeeecC
Confidence 34555554333 3467788999999999886 6899999985532 233444569999999832111111111 11
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCCCEEEEeCCCChhHHHHHHHHHhh--CCCcEEEEecCchhhhhhhccCCCchHH
Q 011969 76 KPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSL--RRSAFIVDWHNFGYTLLSLSLGRRSHFV 153 (474)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~h~~~~~~~~~~~~~~~~~~ 153 (474)
-.+....+.-.+ ++..-. +..+||++++...|.-.-.-+.=++..+ .+++.+.-..+.-.... .....++
T Consensus 85 ~~l~e~~~~Rs~---lil~t~-~~fkPDi~IVd~~P~Glr~EL~ptL~yl~~~~t~~vL~lr~i~D~p~----~~~~~w~ 156 (400)
T COG4671 85 GDLEETKKLRSQ---LILSTA-ETFKPDIFIVDKFPFGLRFELLPTLEYLKTTGTRLVLGLRSIRDIPQ----ELEADWR 156 (400)
T ss_pred CCHHHHHHHHHH---HHHHHH-HhcCCCEEEEeccccchhhhhhHHHHHHhhcCCcceeehHhhhhchh----hhccchh
Confidence 111122222111 111222 2378999999875432111111122222 23455554444311000 0111111
Q ss_pred HHHHHHHHHHhhhcCEEEEeCHHHHHHHHHHhCCc----eEEEeCCCCCCCCCCChHHHHHHHHhhhhccCCCCCccccc
Q 011969 154 SIYRWIEKYYGKMANGCLCVTQAMQHELAQNWGIK----ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCV 229 (474)
Q Consensus 154 ~~~~~~e~~~~~~ad~vi~vS~~~~~~l~~~~~~~----~~vi~n~~~~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 229 (474)
+ ...++.+.++-|.|++...-.-..+.+.++.. ..+.|.|-...--|. .+++.
T Consensus 157 ~--~~~~~~I~r~yD~V~v~GdP~f~d~~~~~~~~~~i~~k~~ytG~vq~~~~~-----------------~~~p~---- 213 (400)
T COG4671 157 R--AETVRLINRFYDLVLVYGDPDFYDPLTEFPFAPAIRAKMRYTGFVQRSLPH-----------------LPLPP---- 213 (400)
T ss_pred h--hHHHHHHHHhheEEEEecCccccChhhcCCccHhhhhheeEeEEeeccCcC-----------------CCCCC----
Confidence 1 13334444455666666554433333333321 222222211000000 00000
Q ss_pred cccccCCcCcchhhhhcccccccccCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcC
Q 011969 230 SNAGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISD 309 (474)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (474)
...+....+++.+|.- .-|.+++-.+++....
T Consensus 214 -----------------------~~~pE~~~Ilvs~GGG--~dG~eLi~~~l~A~~~----------------------- 245 (400)
T COG4671 214 -----------------------HEAPEGFDILVSVGGG--ADGAELIETALAAAQL----------------------- 245 (400)
T ss_pred -----------------------cCCCccceEEEecCCC--hhhHHHHHHHHHHhhh-----------------------
Confidence 0113333466666653 3355544444444322
Q ss_pred CccccCCCE---EEEEEeCCCChHHHHHHHHHcC-CCcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHH
Q 011969 310 GKQYLYPRL---LFIITGKGPDKESYEEKIRRLR-LKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDM 385 (474)
Q Consensus 310 ~~~~~~~~~---~l~ivG~g~~~~~~~~~~~~l~-l~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Ea 385 (474)
.+++ -+++.|.--.++..++....-. .++|....+ ..++..++..|+..|.. ..+ +++.|-
T Consensus 246 -----l~~l~~~~~ivtGP~MP~~~r~~l~~~A~~~p~i~I~~f---~~~~~~ll~gA~~vVSm--~GY-----NTvCeI 310 (400)
T COG4671 246 -----LAGLNHKWLIVTGPFMPEAQRQKLLASAPKRPHISIFEF---RNDFESLLAGARLVVSM--GGY-----NTVCEI 310 (400)
T ss_pred -----CCCCCcceEEEeCCCCCHHHHHHHHHhcccCCCeEEEEh---hhhHHHHHHhhheeeec--ccc-----hhhhHH
Confidence 2333 4677775433444444444433 268999988 89999999999999973 223 389999
Q ss_pred HhcCCcEEEeccccc--ccccccC---CcE---EEeC---CHHHHHHHHHHHHhCC
Q 011969 386 FGCGLPVCAVSYSCI--EELVKVD---KNG---LLFS---SSSELADQLLMLFKGF 430 (474)
Q Consensus 386 ma~G~PVia~~~~~~--~e~v~~~---~~G---~l~~---~~~~la~~i~~l~~~~ 430 (474)
+++|+|.+....... +.++... +-| ++.+ +++.|+++|...++.+
T Consensus 311 Ls~~k~aLivPr~~p~eEQliRA~Rl~~LGL~dvL~pe~lt~~~La~al~~~l~~P 366 (400)
T COG4671 311 LSFGKPALIVPRAAPREEQLIRAQRLEELGLVDVLLPENLTPQNLADALKAALARP 366 (400)
T ss_pred HhCCCceEEeccCCCcHHHHHHHHHHHhcCcceeeCcccCChHHHHHHHHhcccCC
Confidence 999999999874322 2222211 233 3333 4899999999998853
|
|
| >PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A | Back alignment and domain information |
|---|
Probab=98.13 E-value=9.6e-05 Score=78.73 Aligned_cols=143 Identities=13% Similarity=0.097 Sum_probs=94.3
Q ss_pred ccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCC-hHHHHHHHHHcCC--CcEE
Q 011969 269 TPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD-KESYEEKIRRLRL--KRVA 345 (474)
Q Consensus 269 ~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~-~~~~~~~~~~l~l--~~V~ 345 (474)
...|=-+..+++...+.++ .|+.+|++...+.. .+.+++.+++.|+ +++.
T Consensus 293 ~~~KI~p~~l~~W~~IL~~---------------------------vP~S~L~L~~~~~~~~~~l~~~~~~~Gv~~~Ri~ 345 (468)
T PF13844_consen 293 NLFKISPETLDLWARILKA---------------------------VPNSRLWLLRFPASGEARLRRRFAAHGVDPDRII 345 (468)
T ss_dssp -GGG--HHHHHHHHHHHHH---------------------------STTEEEEEEETSTTHHHHHHHHHHHTTS-GGGEE
T ss_pred ccccCCHHHHHHHHHHHHh---------------------------CCCcEEEEeeCCHHHHHHHHHHHHHcCCChhhEE
Confidence 3456666777887777774 79999988775543 4678888999999 6999
Q ss_pred EecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEeccccccc-----ccc-cCCcEEEeCCHHHH
Q 011969 346 FRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEE-----LVK-VDKNGLLFSSSSEL 419 (474)
Q Consensus 346 f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~~~~e-----~v~-~~~~G~l~~~~~~l 419 (474)
|.+. .+.++....++.+|+++=+ ...+=+...+||+.+|+|||+-....+.. ++. -|-..+++.|.++.
T Consensus 346 f~~~-~~~~ehl~~~~~~DI~LDT----~p~nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~ElIA~s~~eY 420 (468)
T PF13844_consen 346 FSPV-APREEHLRRYQLADICLDT----FPYNGGTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPELIADSEEEY 420 (468)
T ss_dssp EEE----HHHHHHHGGG-SEEE------SSS--SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGGB-SSHHHH
T ss_pred EcCC-CCHHHHHHHhhhCCEEeeC----CCCCCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchhcCCCHHHH
Confidence 9987 8888888899999999973 22223679999999999999875332221 111 12233566789999
Q ss_pred HHHHHHHHhCCCCCHHHHHHHHHHHHHh
Q 011969 420 ADQLLMLFKGFPDDSDVLKKLRNGTLEM 447 (474)
Q Consensus 420 a~~i~~l~~~~~~~~~~~~~~~~~~~~~ 447 (474)
.+...++.++ ++.++++|+..++.
T Consensus 421 v~~Av~La~D----~~~l~~lR~~Lr~~ 444 (468)
T PF13844_consen 421 VEIAVRLATD----PERLRALRAKLRDR 444 (468)
T ss_dssp HHHHHHHHH-----HHHHHHHHHHHHHH
T ss_pred HHHHHHHhCC----HHHHHHHHHHHHHH
Confidence 9999999995 88888888888653
|
|
| >PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.11 E-value=0.0014 Score=71.13 Aligned_cols=89 Identities=12% Similarity=0.117 Sum_probs=61.7
Q ss_pred CcEEEecCCCCcccHHHHH--hcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecc----cccccccccCCcEEEeC-
Q 011969 342 KRVAFRTMWLSAEDYPLLL--GSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY----SCIEELVKVDKNGLLFS- 414 (474)
Q Consensus 342 ~~V~f~g~~v~~~~~~~~l--~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~----~~~~e~v~~~~~G~l~~- 414 (474)
+||.+.+ |+|+.+ ++ ..++++|. +|. ...+.||+.+|+|+|+... ......+...+.|...+
T Consensus 346 ~Nv~i~~-w~Pq~~---lL~hp~v~~fIt-----HGG--~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~G~G~~l~~ 414 (507)
T PHA03392 346 ANVLTQK-WFPQRA---VLKHKNVKAFVT-----QGG--VQSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIGRALDT 414 (507)
T ss_pred CceEEec-CCCHHH---HhcCCCCCEEEe-----cCC--cccHHHHHHcCCCEEECCCCccHHHHHHHHHHcCcEEEecc
Confidence 6888875 588754 56 45788886 221 2379999999999999863 33445555667787764
Q ss_pred ---CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Q 011969 415 ---SSSELADQLLMLFKGFPDDSDVLKKLRNGTL 445 (474)
Q Consensus 415 ---~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~ 445 (474)
+.+++.++|.+++++ +..+++.++-+.
T Consensus 415 ~~~t~~~l~~ai~~vl~~----~~y~~~a~~ls~ 444 (507)
T PHA03392 415 VTVSAAQLVLAIVDVIEN----PKYRKNLKELRH 444 (507)
T ss_pred CCcCHHHHHHHHHHHhCC----HHHHHHHHHHHH
Confidence 589999999999984 544444444333
|
|
| >PLN02448 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=98.10 E-value=0.015 Score=62.52 Aligned_cols=95 Identities=16% Similarity=0.167 Sum_probs=62.5
Q ss_pred CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecc----cccccccccC-CcEEEe---
Q 011969 342 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY----SCIEELVKVD-KNGLLF--- 413 (474)
Q Consensus 342 ~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~----~~~~e~v~~~-~~G~l~--- 413 (474)
+++.+. .|+|+.+ ++.+.++..+. +++. -+.++||+++|+|+|+... ......+.+. +.|+-+
T Consensus 323 ~~~~v~-~w~pQ~~---iL~h~~v~~fv---tHgG--~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~ 393 (459)
T PLN02448 323 DMGLVV-PWCDQLK---VLCHSSVGGFW---THCG--WNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKRE 393 (459)
T ss_pred CCEEEe-ccCCHHH---HhccCccceEE---ecCc--hhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEecc
Confidence 366666 4788766 56678885552 3321 2489999999999999753 3333444332 455554
Q ss_pred ------CCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc
Q 011969 414 ------SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG 448 (474)
Q Consensus 414 ------~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~ 448 (474)
-+.+++++++++++.+ ..++.+++|+++.++.
T Consensus 394 ~~~~~~~~~~~l~~av~~vl~~---~~~~~~~~r~~a~~~~ 431 (459)
T PLN02448 394 VGEETLVGREEIAELVKRFMDL---ESEEGKEMRRRAKELQ 431 (459)
T ss_pred cccCCcCcHHHHHHHHHHHhcC---CchhHHHHHHHHHHHH
Confidence 1578999999999974 1245667777776643
|
|
| >COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.10 E-value=0.015 Score=62.38 Aligned_cols=148 Identities=12% Similarity=0.084 Sum_probs=108.8
Q ss_pred eEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCCh--H-------
Q 011969 260 ALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK--E------- 330 (474)
Q Consensus 260 ~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~--~------- 330 (474)
.+++.+-|+..-||+..=+.|+..+.+. .+....++.|+-++..... +
T Consensus 283 kiivgvDRlDy~kGi~~rl~Afe~lL~~-----------------------~Pe~~~kvvliQi~~pSr~~v~~y~~~~~ 339 (486)
T COG0380 283 KLIVGVDRLDYSKGIPQRLLAFERLLEE-----------------------YPEWRGKVVLLQIAPPSREDVEEYQALRL 339 (486)
T ss_pred eEEEEehhcccccCcHHHHHHHHHHHHh-----------------------ChhhhCceEEEEecCCCccccHHHHHHHH
Confidence 4899999999999999999999988763 1112345777777754321 2
Q ss_pred HHHHHHHH----cCC---CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcC----CcEEEecccc
Q 011969 331 SYEEKIRR----LRL---KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCG----LPVCAVSYSC 399 (474)
Q Consensus 331 ~~~~~~~~----l~l---~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G----~PVia~~~~~ 399 (474)
++++.+.+ +|- .-|.|+..-++.+++..+|+.||+++. ++-.+|+-++..|+.||- =|.|-|...|
T Consensus 340 ~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~aDv~lV---tplrDGMNLvakEyVa~q~~~~G~LiLSeFaG 416 (486)
T COG0380 340 QIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRAADVMLV---TPLRDGMNLVAKEYVAAQRDKPGVLILSEFAG 416 (486)
T ss_pred HHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhhhceeee---ccccccccHHHHHHHHhhcCCCCcEEEecccc
Confidence 22233332 222 247777776899999999999999999 788888999999999985 4778888777
Q ss_pred cccccccCCcEEEeC--CHHHHHHHHHHHHhCCCCCHHHHHH
Q 011969 400 IEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKK 439 (474)
Q Consensus 400 ~~e~v~~~~~G~l~~--~~~~la~~i~~l~~~~~~~~~~~~~ 439 (474)
.+..+.+ .++++ |.++++++|...++. .++++++
T Consensus 417 aa~~L~~---AliVNP~d~~~va~ai~~AL~m---~~eEr~~ 452 (486)
T COG0380 417 AASELRD---ALIVNPWDTKEVADAIKRALTM---SLEERKE 452 (486)
T ss_pred chhhhcc---CEeECCCChHHHHHHHHHHhcC---CHHHHHH
Confidence 7766633 56775 799999999999986 4554444
|
|
| >PRK02797 4-alpha-L-fucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.08 E-value=0.0013 Score=66.30 Aligned_cols=229 Identities=15% Similarity=0.151 Sum_probs=136.6
Q ss_pred CCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhhhcCEEEEeCHHHHH
Q 011969 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179 (474)
Q Consensus 100 ~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~ 179 (474)
.+.+-+++|+-... .+.++.+..+....+ +.||-+|-..+ -...+.-.+++..+.|.+.++..+|++ ++..-.
T Consensus 38 ~r~~rff~HGqFn~-~lwlall~g~~~~~q--~yWhiWGaDLY---e~~~~lk~rlfy~lRR~aq~rvg~v~a-trGD~~ 110 (322)
T PRK02797 38 NRAQRFFLHGQFNP-TLWLALLSGKIKPKQ--FYWHIWGADLY---EESKGLKFRLFYPLRRLAQKRVGHVFA-TRGDLS 110 (322)
T ss_pred CccceEEEecCCCH-HHHHHHHhCCcCccc--eEEEEEChhhh---hcccchhHHHHHHHHHHHHhhcCeEEE-ecchHH
Confidence 67788888885432 332333333333333 45666553333 112333346777888999999999999 555555
Q ss_pred HH-HHHhCCceEEEeCCCCCCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhcccccccccCCCC
Q 011969 180 EL-AQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKPNR 258 (474)
Q Consensus 180 ~l-~~~~~~~~~vi~n~~~~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (474)
++ ++.++.+...++- |+.......... . ...+..
T Consensus 111 ~~a~~~~~v~~~llyf-------pt~m~~~l~~~~------------~--------------------------~~~~~~ 145 (322)
T PRK02797 111 YFAQRHPKVPGSLLYF-------PTRMDPSLNTMA------------N--------------------------DRQRAG 145 (322)
T ss_pred HHHHhcCCCCccEEec-------CCcchhhhcccc------------c--------------------------cccCCC
Confidence 64 4555666554333 221111000000 0 011223
Q ss_pred CeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEE-EeCC--CC--hHHHH
Q 011969 259 PALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFII-TGKG--PD--KESYE 333 (474)
Q Consensus 259 ~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i-vG~g--~~--~~~~~ 333 (474)
+.+|+..-+-++..+...++++++... ..++++++ .|.+ .. .++++
T Consensus 146 ~~tIlvGNSgd~SN~Hie~L~~l~~~~-----------------------------~~~v~ii~PlsYp~gn~~Yi~~V~ 196 (322)
T PRK02797 146 KMTILVGNSGDRSNRHIEALRALHQQF-----------------------------GDNVKIIVPMGYPANNQAYIEEVR 196 (322)
T ss_pred ceEEEEeCCCCCcccHHHHHHHHHHHh-----------------------------CCCeEEEEECCcCCCCHHHHHHHH
Confidence 445665556677777766667766542 46777755 3442 21 25566
Q ss_pred HHHHHcCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEec-ccccccccccCCcEE
Q 011969 334 EKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS-YSCIEELVKVDKNGL 411 (474)
Q Consensus 334 ~~~~~l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~-~~~~~e~v~~~~~G~ 411 (474)
+.++++-- +++..+...+|.+|+..+++.||++++.+ .+-.++| .++=.+.+|+||+.+. .+...++.+.+ .-+
T Consensus 197 ~~~~~lF~~~~~~~L~e~l~f~eYl~lL~~~Dl~~f~~--~RQQgiG-nl~lLi~~G~~v~l~r~n~fwqdl~e~g-v~V 272 (322)
T PRK02797 197 QAGLALFGAENFQILTEKLPFDDYLALLRQCDLGYFIF--ARQQGIG-TLCLLIQLGKPVVLSRDNPFWQDLTEQG-LPV 272 (322)
T ss_pred HHHHHhcCcccEEehhhhCCHHHHHHHHHhCCEEEEee--chhhHHh-HHHHHHHCCCcEEEecCCchHHHHHhCC-CeE
Confidence 66666644 68999888899999999999999999952 2445577 5677899999999986 56666655443 334
Q ss_pred Ee
Q 011969 412 LF 413 (474)
Q Consensus 412 l~ 413 (474)
++
T Consensus 273 lf 274 (322)
T PRK02797 273 LF 274 (322)
T ss_pred Ee
Confidence 34
|
|
| >COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.04 E-value=0.003 Score=67.93 Aligned_cols=148 Identities=15% Similarity=0.176 Sum_probs=98.3
Q ss_pred CCCEEEEEEeCCCCh---HHHHHHHHHcCC--CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcC
Q 011969 315 YPRLLFIITGKGPDK---ESYEEKIRRLRL--KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCG 389 (474)
Q Consensus 315 ~~~~~l~ivG~g~~~---~~~~~~~~~l~l--~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G 389 (474)
.|+=.|++-|.|++. +.+++.+++.|+ +++.|.+. .+.++....|+-||+++= ++..+=..+.+|++.+|
T Consensus 457 vP~Svl~L~~~~~~~~~~~~l~~la~~~Gv~~eRL~f~p~-~~~~~h~a~~~iADlvLD----TyPY~g~TTa~daLwm~ 531 (620)
T COG3914 457 VPNSVLLLKAGGDDAEINARLRDLAEREGVDSERLRFLPP-APNEDHRARYGIADLVLD----TYPYGGHTTASDALWMG 531 (620)
T ss_pred CCCcEEEEecCCCcHHHHHHHHHHHHHcCCChhheeecCC-CCCHHHHHhhchhheeee----cccCCCccchHHHHHhc
Confidence 699999999987654 678889999999 69999999 999999999999999995 55555567999999999
Q ss_pred CcEEEecccccc-----cccc-cCCcEEEeCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccc-cchH-HHHHHHH
Q 011969 390 LPVCAVSYSCIE-----ELVK-VDKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLS-ARWA-TEWEEHA 461 (474)
Q Consensus 390 ~PVia~~~~~~~-----e~v~-~~~~G~l~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~w~-~~~~~~~ 461 (474)
+||++-...... .++. -|-.-+++.+.++..+.-..+-+ |...+++.+..-.+..+. -=|+ .....-+
T Consensus 532 vPVlT~~G~~FasR~~~si~~~agi~e~vA~s~~dYV~~av~~g~----dral~q~~r~~l~~~r~tspL~d~~~far~l 607 (620)
T COG3914 532 VPVLTRVGEQFASRNGASIATNAGIPELVADSRADYVEKAVAFGS----DRALRQQVRAELKRSRQTSPLFDPKAFARKL 607 (620)
T ss_pred CceeeeccHHHHHhhhHHHHHhcCCchhhcCCHHHHHHHHHHhcc----cHHHHHhhHHHHHhccccCcccCHHHHHHHH
Confidence 999986422111 1221 13334555666666666666655 355666666555443211 1133 2223334
Q ss_pred HHHHHHHhhc
Q 011969 462 KPLITEVISQ 471 (474)
Q Consensus 462 ~~~~~~~~~~ 471 (474)
+.++.++.++
T Consensus 608 e~~y~~M~~~ 617 (620)
T COG3914 608 ETLYWGMWSE 617 (620)
T ss_pred HHHHHHHHHh
Confidence 5555555444
|
|
| >PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long) | Back alignment and domain information |
|---|
Probab=97.95 E-value=0.0026 Score=64.89 Aligned_cols=246 Identities=16% Similarity=0.172 Sum_probs=142.2
Q ss_pred cCCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhhhcCEEEEeCHHHH
Q 011969 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178 (474)
Q Consensus 99 ~~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~ 178 (474)
..+.+-+++|+-.... +.++.+..+.+..++ .||-+|-..+. ...+.-.+++..+.+.+.++..+|++ ++..-
T Consensus 76 ~~r~~kff~HGqFn~~-lwlaLl~g~~~~~k~--~WhIWGaDLYe---~~~~~k~rlfy~lRr~aq~rvg~V~a-t~GDl 148 (360)
T PF07429_consen 76 ADRADKFFLHGQFNPW-LWLALLFGKIKLKKC--YWHIWGADLYE---DSRSLKFRLFYFLRRLAQKRVGHVFA-TRGDL 148 (360)
T ss_pred hCccceEEEeccCcHH-HHHHHHcCCccccce--EEEEeCchhhc---cccccchhHHHHHHHHHHhhcCeEEE-EcchH
Confidence 3778888888854433 323444444444443 35555432221 11222235556778888888888876 56666
Q ss_pred HHHHHHhCCc-eEEEeCCCCCCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhcccccccccCCC
Q 011969 179 HELAQNWGIK-ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKPN 257 (474)
Q Consensus 179 ~~l~~~~~~~-~~vi~n~~~~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (474)
.+.++.++.. ...++- |+.......... ......
T Consensus 149 ~~~~q~~~~~~~~~lyf-------Pt~m~~~~~~~~--------------------------------------~~~~~~ 183 (360)
T PF07429_consen 149 AYFQQRYPRVPASLLYF-------PTRMDPALTLSE--------------------------------------KNKKNK 183 (360)
T ss_pred HHHHHHcCCCCceEEEc-------CCCCchhhhccc--------------------------------------cccCCC
Confidence 6788877543 333333 221100000000 001123
Q ss_pred CCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEE-EeCCCCh----HHH
Q 011969 258 RPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFII-TGKGPDK----ESY 332 (474)
Q Consensus 258 ~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i-vG~g~~~----~~~ 332 (474)
.+..|+..-+-++..+.-.++++++.. ...++++++ .|.|... +++
T Consensus 184 ~~ltILvGNSgd~sNnHieaL~~L~~~-----------------------------~~~~~kIivPLsYg~~n~~Yi~~V 234 (360)
T PF07429_consen 184 GKLTILVGNSGDPSNNHIEALEALKQQ-----------------------------FGDDVKIIVPLSYGANNQAYIQQV 234 (360)
T ss_pred CceEEEEcCCCCCCccHHHHHHHHHHh-----------------------------cCCCeEEEEECCCCCchHHHHHHH
Confidence 454666666677777776666666653 235666644 4555432 445
Q ss_pred HHHHHHc-CCCcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecccccccccccCCcEE
Q 011969 333 EEKIRRL-RLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGL 411 (474)
Q Consensus 333 ~~~~~~l-~l~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~~~~e~v~~~~~G~ 411 (474)
.+.++++ +.+++..+..++|.+|+..+++.||++++. ..+-.++| .++=.+.+|+||+-+.....-..+.+.+.-+
T Consensus 235 ~~~~~~lF~~~~~~iL~e~mpf~eYl~lL~~cDl~if~--~~RQQgiG-nI~lLl~~G~~v~L~~~np~~~~l~~~~ipV 311 (360)
T PF07429_consen 235 IQAGKELFGAENFQILTEFMPFDEYLALLSRCDLGIFN--HNRQQGIG-NICLLLQLGKKVFLSRDNPFWQDLKEQGIPV 311 (360)
T ss_pred HHHHHHhcCccceeEhhhhCCHHHHHHHHHhCCEEEEe--echhhhHh-HHHHHHHcCCeEEEecCChHHHHHHhCCCeE
Confidence 5555655 335888877669999999999999999995 23446677 5677999999999997554444444444334
Q ss_pred EeC----CHHHHHHHHHHHHh
Q 011969 412 LFS----SSSELADQLLMLFK 428 (474)
Q Consensus 412 l~~----~~~~la~~i~~l~~ 428 (474)
++. |.+.+.++=+++..
T Consensus 312 lf~~d~L~~~~v~ea~rql~~ 332 (360)
T PF07429_consen 312 LFYGDELDEALVREAQRQLAN 332 (360)
T ss_pred EeccccCCHHHHHHHHHHHhh
Confidence 443 35555555555544
|
This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall |
| >PRK10017 colanic acid biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=97.94 E-value=0.02 Score=60.98 Aligned_cols=101 Identities=13% Similarity=0.115 Sum_probs=64.7
Q ss_pred HHHHHHcCC-CcEEE-ecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEeccc----cccccccc
Q 011969 333 EEKIRRLRL-KRVAF-RTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS----CIEELVKV 406 (474)
Q Consensus 333 ~~~~~~l~l-~~V~f-~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~----~~~e~v~~ 406 (474)
++..+.+.- .++++ ... .+..++..++++||++|- ...+ .++=|++.|+|+++..+. ++-+.+.
T Consensus 297 ~~l~~~~~~~~~~~vi~~~-~~~~e~~~iIs~~dl~ig---~RlH-----a~I~a~~~gvP~i~i~Y~~K~~~~~~~lg- 366 (426)
T PRK10017 297 LNLRQHVSDPARYHVVMDE-LNDLEMGKILGACELTVG---TRLH-----SAIISMNFGTPAIAINYEHKSAGIMQQLG- 366 (426)
T ss_pred HHHHHhcccccceeEecCC-CChHHHHHHHhhCCEEEE---ecch-----HHHHHHHcCCCEEEeeehHHHHHHHHHcC-
Confidence 444455443 34443 333 456788899999999997 3333 679999999999998752 2222221
Q ss_pred CCcEEEeC----CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHh
Q 011969 407 DKNGLLFS----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEM 447 (474)
Q Consensus 407 ~~~G~l~~----~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~ 447 (474)
...++++ +.++|.+.+..++++ .++..++++++..+.
T Consensus 367 -~~~~~~~~~~l~~~~Li~~v~~~~~~---r~~~~~~l~~~v~~~ 407 (426)
T PRK10017 367 -LPEMAIDIRHLLDGSLQAMVADTLGQ---LPALNARLAEAVSRE 407 (426)
T ss_pred -CccEEechhhCCHHHHHHHHHHHHhC---HHHHHHHHHHHHHHH
Confidence 1223332 578899999999986 344555566666553
|
|
| >PLN02208 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=97.91 E-value=0.05 Score=58.17 Aligned_cols=114 Identities=13% Similarity=0.156 Sum_probs=72.5
Q ss_pred cEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecc----cccccc-cccCCcEEEeC---
Q 011969 343 RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY----SCIEEL-VKVDKNGLLFS--- 414 (474)
Q Consensus 343 ~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~----~~~~e~-v~~~~~G~l~~--- 414 (474)
++.+. .|+|+.+ +|++..+..+. +++. -+.++||+++|+|+|+... .....+ +..-+.|+..+
T Consensus 312 g~~v~-~W~PQ~~---iL~H~~v~~Fv---tHcG--~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~ 382 (442)
T PLN02208 312 GVVWG-GWVQQPL---ILDHPSIGCFV---NHCG--PGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREK 382 (442)
T ss_pred CcEee-ccCCHHH---HhcCCccCeEE---ccCC--chHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEecccc
Confidence 45554 4788876 68888887773 4331 2489999999999999863 223333 33346676662
Q ss_pred ----CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccc-hHHHHHHHHHHHHHHHh
Q 011969 415 ----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSAR-WATEWEEHAKPLITEVI 469 (474)
Q Consensus 415 ----~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-w~~~~~~~~~~~~~~~~ 469 (474)
+.+++++++++++++ ..+..+++++++.+..+... =..++ +.++.++++++
T Consensus 383 ~~~~~~~~l~~ai~~~m~~---~~e~g~~~r~~~~~~~~~~~~~gsS~-~~l~~~v~~l~ 438 (442)
T PLN02208 383 TGWFSKESLSNAIKSVMDK---DSDLGKLVRSNHTKLKEILVSPGLLT-GYVDKFVEELQ 438 (442)
T ss_pred CCcCcHHHHHHHHHHHhcC---CchhHHHHHHHHHHHHHHHhcCCcHH-HHHHHHHHHHH
Confidence 578999999999975 23556778888776532211 11233 34566666654
|
|
| >PLN02173 UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.058 Score=57.83 Aligned_cols=92 Identities=12% Similarity=0.213 Sum_probs=62.7
Q ss_pred CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecc----cccccccccC-CcEEEeC--
Q 011969 342 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY----SCIEELVKVD-KNGLLFS-- 414 (474)
Q Consensus 342 ~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~----~~~~e~v~~~-~~G~l~~-- 414 (474)
+++.+. .|+|+.+ ++.+.++..+. +++. -+.++||+++|+|+|+... ......+.+. +.|+-+.
T Consensus 317 ~~~~i~-~W~PQ~~---iL~H~~v~~Fv---tHcG--wnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~~ 387 (449)
T PLN02173 317 DKSLVL-KWSPQLQ---VLSNKAIGCFM---THCG--WNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKAE 387 (449)
T ss_pred CceEEe-CCCCHHH---HhCCCccceEE---ecCc--cchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEeec
Confidence 467777 4788655 68888877773 3331 2489999999999999852 3334444432 5665542
Q ss_pred ------CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHh
Q 011969 415 ------SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEM 447 (474)
Q Consensus 415 ------~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~ 447 (474)
+.+++++++++++.+ ++.+++|+++.++
T Consensus 388 ~~~~~~~~e~v~~av~~vm~~-----~~~~~~r~~a~~~ 421 (449)
T PLN02173 388 KESGIAKREEIEFSIKEVMEG-----EKSKEMKENAGKW 421 (449)
T ss_pred ccCCcccHHHHHHHHHHHhcC-----ChHHHHHHHHHHH
Confidence 578999999999974 2245666666654
|
|
| >TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.003 Score=64.42 Aligned_cols=103 Identities=17% Similarity=0.121 Sum_probs=70.3
Q ss_pred CCCCeEEEEEee-cccCCCHH--HHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCChHHH
Q 011969 256 PNRPALVVSSTS-WTPDEDFG--ILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESY 332 (474)
Q Consensus 256 ~~~~~~i~~~G~-l~~~k~~~--~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~~ 332 (474)
+++|++++..|. +.+.|... ...+.+..+.+ .+..++++|...+++..
T Consensus 172 ~~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~-----------------------------~~~~ivl~G~~~e~~~~ 222 (334)
T TIGR02195 172 TERPIIAFCPGAEFGPAKRWPHEHYAELAKRLID-----------------------------QGYQVVLFGSAKDHPAG 222 (334)
T ss_pred CCCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHH-----------------------------CCCEEEEEEChhhHHHH
Confidence 356667777765 44555444 66666666544 24678899977666655
Q ss_pred HHHHHHcCCCcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEec
Q 011969 333 EEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS 396 (474)
Q Consensus 333 ~~~~~~l~l~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~ 396 (474)
++..+..+-..+.+.|. .+-.++..+++.||++|. ..+| .+==|.|+|+|+|+--
T Consensus 223 ~~i~~~~~~~~~~l~g~-~sL~el~ali~~a~l~I~---~DSG-----p~HlAaA~~~P~i~lf 277 (334)
T TIGR02195 223 NEIEALLPGELRNLAGE-TSLDEAVDLIALAKAVVT---NDSG-----LMHVAAALNRPLVALY 277 (334)
T ss_pred HHHHHhCCcccccCCCC-CCHHHHHHHHHhCCEEEe---eCCH-----HHHHHHHcCCCEEEEE
Confidence 55544433223456777 889999999999999998 4555 3445789999999864
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >PLN02562 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.11 Score=55.67 Aligned_cols=79 Identities=14% Similarity=0.135 Sum_probs=55.0
Q ss_pred CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEec----cccccccccc-CCcEEEeC--
Q 011969 342 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS----YSCIEELVKV-DKNGLLFS-- 414 (474)
Q Consensus 342 ~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~----~~~~~e~v~~-~~~G~l~~-- 414 (474)
+|+.+. .|+|+.+ ++.+.++..+. +++. -+.++||+.+|+|+|+.. .......+.+ -+.|+-+.
T Consensus 328 ~~~~v~-~w~PQ~~---iL~h~~v~~fv---tH~G--~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~ 398 (448)
T PLN02562 328 KQGKVV-SWAPQLE---VLKHQAVGCYL---THCG--WNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRISGF 398 (448)
T ss_pred cCEEEE-ecCCHHH---HhCCCccceEE---ecCc--chhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEeCCC
Confidence 467666 4788765 57778876663 3331 238999999999999875 3334444433 36676664
Q ss_pred CHHHHHHHHHHHHhC
Q 011969 415 SSSELADQLLMLFKG 429 (474)
Q Consensus 415 ~~~~la~~i~~l~~~ 429 (474)
+.+++++++++++.+
T Consensus 399 ~~~~l~~~v~~~l~~ 413 (448)
T PLN02562 399 GQKEVEEGLRKVMED 413 (448)
T ss_pred CHHHHHHHHHHHhCC
Confidence 689999999999974
|
|
| >PRK10422 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.054 Score=55.81 Aligned_cols=101 Identities=10% Similarity=0.008 Sum_probs=65.4
Q ss_pred CCeEEEEEeecccCCCH--HHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCC--hHHHH
Q 011969 258 RPALVVSSTSWTPDEDF--GILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD--KESYE 333 (474)
Q Consensus 258 ~~~~i~~~G~l~~~k~~--~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~--~~~~~ 333 (474)
++++++..|.-.+.|.. +...+.+..+.+ .+..++++|...+ .+..+
T Consensus 183 ~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~-----------------------------~~~~vvl~ggp~e~e~~~~~ 233 (352)
T PRK10422 183 QNYVVIQPTARQIFKCWDNDKFSAVIDALQA-----------------------------RGYEVVLTSGPDKDDLACVN 233 (352)
T ss_pred CCeEEEecCCCccccCCCHHHHHHHHHHHHH-----------------------------CCCeEEEEcCCChHHHHHHH
Confidence 45566776664455543 355555655543 2567888875432 22234
Q ss_pred HHHHHcCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEec
Q 011969 334 EKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS 396 (474)
Q Consensus 334 ~~~~~l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~ 396 (474)
+.++.... +.+.+.|. .+-.++..+++.||++|. ..+| .+==|-|+|+|+|+--
T Consensus 234 ~i~~~~~~~~~~~l~g~-~sL~el~ali~~a~l~v~---nDSG-----p~HlAaA~g~P~v~lf 288 (352)
T PRK10422 234 EIAQGCQTPPVTALAGK-TTFPELGALIDHAQLFIG---VDSA-----PAHIAAAVNTPLICLF 288 (352)
T ss_pred HHHHhcCCCccccccCC-CCHHHHHHHHHhCCEEEe---cCCH-----HHHHHHHcCCCEEEEE
Confidence 44443332 34567777 889999999999999998 4566 3455778999999864
|
|
| >PLN00414 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.17 Score=54.28 Aligned_cols=89 Identities=11% Similarity=0.149 Sum_probs=61.3
Q ss_pred CCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecc----ccccccc-ccCCcEEEeC-------CH
Q 011969 349 MWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY----SCIEELV-KVDKNGLLFS-------SS 416 (474)
Q Consensus 349 ~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~----~~~~e~v-~~~~~G~l~~-------~~ 416 (474)
.|+|+.+ +++++.+..+. +++. -++++||+.+|+|+|+... ......+ +.-+.|+... +.
T Consensus 318 ~w~PQ~~---vL~h~~v~~fv---tH~G--~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~ 389 (446)
T PLN00414 318 GWVEQPL---ILSHPSVGCFV---NHCG--FGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQREDSGWFSK 389 (446)
T ss_pred ccCCHHH---HhcCCccceEE---ecCc--hhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEeccccCCccCH
Confidence 4688766 57777665552 3221 2489999999999999753 3334444 3457776662 58
Q ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc
Q 011969 417 SELADQLLMLFKGFPDDSDVLKKLRNGTLEMG 448 (474)
Q Consensus 417 ~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~ 448 (474)
+++++++++++.+ +.+..+++++++.+..
T Consensus 390 ~~i~~~v~~~m~~---~~e~g~~~r~~a~~~~ 418 (446)
T PLN00414 390 ESLRDTVKSVMDK---DSEIGNLVKRNHKKLK 418 (446)
T ss_pred HHHHHHHHHHhcC---ChhhHHHHHHHHHHHH
Confidence 8999999999974 3356677788777653
|
|
| >PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2 | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00015 Score=71.24 Aligned_cols=81 Identities=17% Similarity=0.133 Sum_probs=47.2
Q ss_pred CCCCEEEEeCCCChhHHHHHHHHHhhC-------CCcEEEEecCchhhhhh-----hccC-CCchH--------HHHHHH
Q 011969 100 ASPDVFLVQNPPSVPTLVAVKWASSLR-------RSAFIVDWHNFGYTLLS-----LSLG-RRSHF--------VSIYRW 158 (474)
Q Consensus 100 ~~~Dvi~~~~~~~~~~~~~~~~~~~~~-------~~~~i~~~h~~~~~~~~-----~~~~-~~~~~--------~~~~~~ 158 (474)
.+||+||+|+ +.+.++..+++... ++|+++++||..|.-.. ...+ +...+ .... .
T Consensus 132 ~~pDIIH~hD---W~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~~~~~~~~~~~~~~~i-n 207 (245)
T PF08323_consen 132 WKPDIIHCHD---WHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLPDEYFQNLDEYEFYGQI-N 207 (245)
T ss_dssp -S-SEEEEEC---GGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEGGGGGCTT-GGGGS-STTTTEETTEE-E
T ss_pred CCCCEEEecC---chHHHHHHHhccccccccccccceeEEEEcccccCCcCCHHHHHHcCCCHHHhcccccccccccc-C
Confidence 5899999999 45554555555543 59999999997542110 0000 00000 0000 2
Q ss_pred HHHHHhhhcCEEEEeCHHHHHHHHHH
Q 011969 159 IEKYYGKMANGCLCVTQAMQHELAQN 184 (474)
Q Consensus 159 ~e~~~~~~ad~vi~vS~~~~~~l~~~ 184 (474)
+.+.....||.|.+||+..++++.+.
T Consensus 208 ~lk~gi~~AD~v~TVS~~Ya~Ei~~~ 233 (245)
T PF08323_consen 208 FLKAGIVYADKVTTVSPTYAREIQTP 233 (245)
T ss_dssp HHHHHHHHSSEEEESSHHHHHHTTSH
T ss_pred HHHHHHHhcCEeeeCCHHHHHHHhCc
Confidence 34466779999999999999887654
|
4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A .... |
| >PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.2 Score=53.77 Aligned_cols=92 Identities=13% Similarity=0.248 Sum_probs=60.9
Q ss_pred CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecc----cccccccccC-CcEEEeC--
Q 011969 342 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY----SCIEELVKVD-KNGLLFS-- 414 (474)
Q Consensus 342 ~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~----~~~~e~v~~~-~~G~l~~-- 414 (474)
+|.... .|+|+.+ ++.+.++..+. +++ | -+.++||+++|+|+|+... ......+.+. +.|+.+.
T Consensus 324 ~~g~v~-~w~PQ~~---iL~h~~v~~fv---tH~-G-~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~ 394 (451)
T PLN02410 324 GRGYIV-KWAPQKE---VLSHPAVGGFW---SHC-G-WNSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVEGD 394 (451)
T ss_pred CCeEEE-ccCCHHH---HhCCCccCeee---ecC-c-hhHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeCCc
Confidence 355555 4888877 67777775552 322 1 2389999999999999753 3333444333 6787763
Q ss_pred -CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHh
Q 011969 415 -SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEM 447 (474)
Q Consensus 415 -~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~ 447 (474)
+.+++++++++++.+ ++ .+++++++.++
T Consensus 395 ~~~~~v~~av~~lm~~----~~-~~~~r~~a~~l 423 (451)
T PLN02410 395 LDRGAVERAVKRLMVE----EE-GEEMRKRAISL 423 (451)
T ss_pred ccHHHHHHHHHHHHcC----Cc-HHHHHHHHHHH
Confidence 689999999999974 22 34555555543
|
|
| >COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.16 Score=50.25 Aligned_cols=200 Identities=14% Similarity=0.099 Sum_probs=113.1
Q ss_pred CCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhhhcCEEEEeCHHHHH
Q 011969 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179 (474)
Q Consensus 100 ~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~ 179 (474)
..||+++..+. -+.+++..+++..+.+.++.+.+.. +. ++.-|.||+.-....+
T Consensus 69 ~~Pdl~I~aGr---rta~l~~~lkk~~~~~~vVqI~~Pr-------lp----------------~~~fDlvivp~HD~~~ 122 (329)
T COG3660 69 QRPDLIITAGR---RTAPLAFYLKKKFGGIKVVQIQDPR-------LP----------------YNHFDLVIVPYHDWRE 122 (329)
T ss_pred CCCceEEeccc---chhHHHHHHHHhcCCceEEEeeCCC-------CC----------------cccceEEeccchhhhh
Confidence 46999999884 4555566667666667788887772 11 1345677766665554
Q ss_pred HHHHHhCCceEEEeCCCCCCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhcccccccccCCCCC
Q 011969 180 ELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKPNRP 259 (474)
Q Consensus 180 ~l~~~~~~~~~vi~n~~~~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (474)
+... -+.++. --+|.+..-.+.-.....+.+.+++ +..++
T Consensus 123 ~~s~-~~~Nil-pi~Gs~h~Vt~~~lAa~~e~~~~~~--------------------------------------p~~rq 162 (329)
T COG3660 123 ELSD-QGPNIL-PINGSPHNVTSQRLAALREAFKHLL--------------------------------------PLPRQ 162 (329)
T ss_pred hhhc-cCCcee-eccCCCCcccHHHhhhhHHHHHhhC--------------------------------------CCCCc
Confidence 4222 133321 1223221111111112223333332 35567
Q ss_pred eEEEEEeecccCCCH--HHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCChHHHHHHHH
Q 011969 260 ALVVSSTSWTPDEDF--GILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIR 337 (474)
Q Consensus 260 ~~i~~~G~l~~~k~~--~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~~ 337 (474)
++-+.+|.-.+.-.+ +.+.+..+.+.+. +......|++.-+--..+.++..++
T Consensus 163 ~vAVlVGg~nk~f~~~~d~a~q~~~~l~k~-------------------------l~~~g~~~lisfSRRTp~~~~s~l~ 217 (329)
T COG3660 163 RVAVLVGGNNKAFVFQEDKAHQFASLLVKI-------------------------LENQGGSFLISFSRRTPDTVKSILK 217 (329)
T ss_pred eEEEEecCCCCCCccCHHHHHHHHHHHHHH-------------------------HHhCCceEEEEeecCCcHHHHHHHH
Confidence 788889887766555 3344444443331 1124567777776555566777666
Q ss_pred H-cCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEec
Q 011969 338 R-LRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS 396 (474)
Q Consensus 338 ~-l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~ 396 (474)
. +.- .-+.+-+.-....-+..++..||..+. +..... -..||.+.|+||-+-.
T Consensus 218 ~~l~s~~~i~w~~~d~g~NPY~~~La~Adyii~---TaDSin---M~sEAasTgkPv~~~~ 272 (329)
T COG3660 218 NNLNSSPGIVWNNEDTGYNPYIDMLAAADYIIS---TADSIN---MCSEAASTGKPVFILE 272 (329)
T ss_pred hccccCceeEeCCCCCCCCchHHHHhhcceEEE---ecchhh---hhHHHhccCCCeEEEe
Confidence 5 332 334444332245578899999999998 333322 3689999999998753
|
|
| >TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.039 Score=56.51 Aligned_cols=71 Identities=14% Similarity=0.072 Sum_probs=49.2
Q ss_pred CEEEEEEeCCCC--hHHHHHHHHHcCCC-cEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEE
Q 011969 317 RLLFIITGKGPD--KESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVC 393 (474)
Q Consensus 317 ~~~l~ivG~g~~--~~~~~~~~~~l~l~-~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVi 393 (474)
+..++++|...+ .+..++..+..+-+ .+.+.|. .+-.++..+++.||++|. ..+| .+==|.|+|+|+|
T Consensus 213 ~~~ivl~g~p~~~e~~~~~~i~~~~~~~~~~~l~g~-~sL~el~ali~~a~l~Vs---~DSG-----p~HlAaA~g~p~v 283 (344)
T TIGR02201 213 GYEVVLTSGPDKDELAMVNEIAQGCQTPRVTSLAGK-LTLPQLAALIDHARLFIG---VDSV-----PMHMAAALGTPLV 283 (344)
T ss_pred CCeEEEecCCCHHHHHHHHHHHhhCCCCcccccCCC-CCHHHHHHHHHhCCEEEe---cCCH-----HHHHHHHcCCCEE
Confidence 467888885432 22334444443333 3556777 889999999999999998 4555 4555889999999
Q ss_pred Eec
Q 011969 394 AVS 396 (474)
Q Consensus 394 a~~ 396 (474)
+--
T Consensus 284 ~Lf 286 (344)
T TIGR02201 284 ALF 286 (344)
T ss_pred EEE
Confidence 864
|
This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II. |
| >TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.32 Score=48.75 Aligned_cols=201 Identities=20% Similarity=0.172 Sum_probs=110.3
Q ss_pred CCCCEEEEeCCCChh------HH---HHHHHHHhhCCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhhhcCEE
Q 011969 100 ASPDVFLVQNPPSVP------TL---VAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGC 170 (474)
Q Consensus 100 ~~~Dvi~~~~~~~~~------~~---~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~v 170 (474)
.+.|++++.....+. .+ ......+++.++|+++.-.+++. + .++ ..+++-+.+.+.+|.+
T Consensus 63 ~~~D~vI~gGG~l~~d~~~~~~~~~~~~~~~~a~~~~k~~~~~g~giGP------~--~~~---~~r~~~~~~l~~~~~i 131 (298)
T TIGR03609 63 RRADVVIWGGGSLLQDVTSFRSLLYYLGLMRLARLFGKPVILWGQGIGP------L--RRR---LSRWLVRRVLRGCRAI 131 (298)
T ss_pred HHCCEEEECCcccccCCcccccHHHHHHHHHHHHHcCCCEEEEecccCC------c--CCH---HHHHHHHHHHccCCEE
Confidence 567888765432221 11 11223445678898887777642 1 111 2345566677899998
Q ss_pred EEeCHHHHHHHHHHhCCceEEEeCCCCCCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhccccc
Q 011969 171 LCVTQAMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGI 250 (474)
Q Consensus 171 i~vS~~~~~~l~~~~~~~~~vi~n~~~~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (474)
.+=.+..++++++ .|.++.+.++..- .+.+.....
T Consensus 132 ~vRD~~S~~~l~~-~g~~i~~~~D~a~-~l~~~~~~~------------------------------------------- 166 (298)
T TIGR03609 132 SVRDAASYRLLKR-LGIPAELAADPVW-LLPPEPWPG------------------------------------------- 166 (298)
T ss_pred EEeCHHHHHHHHH-hCCCceEeCChhh-hCCCCcccc-------------------------------------------
Confidence 8877777776655 6777555554311 010100000
Q ss_pred ccccCCCCCeEEEEEeeccc--CCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeC--C
Q 011969 251 DVFLKPNRPALVVSSTSWTP--DEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGK--G 326 (474)
Q Consensus 251 ~~~~~~~~~~~i~~~G~l~~--~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~--g 326 (474)
....+++.+.+.+..+.. ....+.+.+++..+.++ .+.+++++.. +
T Consensus 167 --~~~~~~~~i~i~~r~~~~~~~~~~~~l~~~l~~l~~~----------------------------~g~~v~~i~~~~~ 216 (298)
T TIGR03609 167 --GEPLPEPVIVVSLRPWPLLDVSRLLRLLRALDRLQRD----------------------------TGAFVLFLPFQQP 216 (298)
T ss_pred --cccCCCCeEEEEECCCCcCCHHHHHHHHHHHHHHHHh----------------------------hCCeEEEEeCCcc
Confidence 001223434455444321 12344566666665442 2344544442 2
Q ss_pred CChHHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecc
Q 011969 327 PDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY 397 (474)
Q Consensus 327 ~~~~~~~~~~~~l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~ 397 (474)
.+.+..++..+.+.- ..| +.. .+.+++..++++||++|. ...+ .++=|+.+|+|+++..+
T Consensus 217 ~D~~~~~~l~~~~~~~~~i--~~~-~~~~e~~~~i~~~~~vI~---~RlH-----~~I~A~~~gvP~i~i~y 277 (298)
T TIGR03609 217 QDLPLARALRDQLLGPAEV--LSP-LDPEELLGLFASARLVIG---MRLH-----ALILAAAAGVPFVALSY 277 (298)
T ss_pred hhHHHHHHHHHhcCCCcEE--Eec-CCHHHHHHHHhhCCEEEE---echH-----HHHHHHHcCCCEEEeec
Confidence 344434444444432 233 233 678899999999999986 3434 67999999999998753
|
The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395). |
| >PLN02210 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.56 Score=50.40 Aligned_cols=91 Identities=14% Similarity=0.205 Sum_probs=60.1
Q ss_pred cEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecc----ccccccccc-CCcEEEeC---
Q 011969 343 RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY----SCIEELVKV-DKNGLLFS--- 414 (474)
Q Consensus 343 ~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~----~~~~e~v~~-~~~G~l~~--- 414 (474)
+..+. .|+|+.+ +++++++..+.+....+ +++||+.+|+|+|+... ......+.+ -+.|+...
T Consensus 325 ~g~v~-~w~PQ~~---iL~h~~vg~FitH~G~n-----S~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~ 395 (456)
T PLN02210 325 QGVVL-EWSPQEK---ILSHMAISCFVTHCGWN-----STIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDA 395 (456)
T ss_pred CeEEE-ecCCHHH---HhcCcCcCeEEeeCCcc-----cHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccc
Confidence 33344 5788865 78888866663222233 89999999999999753 333344444 57777662
Q ss_pred -----CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHh
Q 011969 415 -----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEM 447 (474)
Q Consensus 415 -----~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~ 447 (474)
+.+++++++++++.+ +..+++|+++.++
T Consensus 396 ~~~~~~~~~l~~av~~~m~~-----~~g~~~r~~a~~l 428 (456)
T PLN02210 396 VDGELKVEEVERCIEAVTEG-----PAAADIRRRAAEL 428 (456)
T ss_pred cCCcCCHHHHHHHHHHHhcC-----chHHHHHHHHHHH
Confidence 578999999999974 2234566666543
|
|
| >PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.10 E-value=1.6e-05 Score=72.87 Aligned_cols=89 Identities=16% Similarity=0.303 Sum_probs=59.2
Q ss_pred CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecccc--------cccccccCCcEEEe
Q 011969 342 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC--------IEELVKVDKNGLLF 413 (474)
Q Consensus 342 ~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~~--------~~e~v~~~~~G~l~ 413 (474)
.+|.+.++ .+++..+++.||++|. ..| +.++.|++++|+|.|...... ....+...+.|...
T Consensus 55 ~~v~~~~~---~~~m~~~m~~aDlvIs----~aG---~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~~ 124 (167)
T PF04101_consen 55 PNVKVFGF---VDNMAELMAAADLVIS----HAG---AGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIML 124 (167)
T ss_dssp CCCEEECS---SSSHHHHHHHHSEEEE----CS----CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCCS
T ss_pred CcEEEEec---hhhHHHHHHHcCEEEe----CCC---ccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCcccc
Confidence 58999988 6789999999999987 223 358999999999999887555 22233344445444
Q ss_pred C----CHHHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 011969 414 S----SSSELADQLLMLFKGFPDDSDVLKKLRNGT 444 (474)
Q Consensus 414 ~----~~~~la~~i~~l~~~~~~~~~~~~~~~~~~ 444 (474)
. +++.|.++|..++++ +...+++.+..
T Consensus 125 ~~~~~~~~~L~~~i~~l~~~----~~~~~~~~~~~ 155 (167)
T PF04101_consen 125 DESELNPEELAEAIEELLSD----PEKLKEMAKAA 155 (167)
T ss_dssp ECCC-SCCCHHHHHHCHCCC----HH-SHHHCCCH
T ss_pred CcccCCHHHHHHHHHHHHcC----cHHHHHHHHHH
Confidence 3 377899999999885 55545554443
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B. |
| >PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.18 Score=51.80 Aligned_cols=71 Identities=17% Similarity=0.157 Sum_probs=51.5
Q ss_pred CEEEEEEeCCCChHHHHHHHHHcCC---Cc-EEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcE
Q 011969 317 RLLFIITGKGPDKESYEEKIRRLRL---KR-VAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPV 392 (474)
Q Consensus 317 ~~~l~ivG~g~~~~~~~~~~~~l~l---~~-V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PV 392 (474)
++.++++|...+++..++..+.++- .+ +.+.|. .+-.++..+++.||++|. ..+| .+==|-|.|+|+
T Consensus 213 ~~~vvl~Gg~~e~~~~~~i~~~~~~~~~~~~~~l~g~-~sL~el~ali~~a~l~I~---nDTG-----p~HlAaA~g~P~ 283 (348)
T PRK10916 213 GYQVVLFGSAKDHEAGNEILAALNTEQQAWCRNLAGE-TQLEQAVILIAACKAIVT---NDSG-----LMHVAAALNRPL 283 (348)
T ss_pred CCeEEEEeCHHhHHHHHHHHHhcccccccceeeccCC-CCHHHHHHHHHhCCEEEe---cCCh-----HHHHHHHhCCCE
Confidence 5778888976666655555555432 12 556676 788999999999999998 4555 344588999999
Q ss_pred EEec
Q 011969 393 CAVS 396 (474)
Q Consensus 393 ia~~ 396 (474)
|+--
T Consensus 284 valf 287 (348)
T PRK10916 284 VALY 287 (348)
T ss_pred EEEE
Confidence 9864
|
|
| >COG1817 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.23 Score=50.28 Aligned_cols=287 Identities=16% Similarity=0.170 Sum_probs=153.3
Q ss_pred CCCCCchHHH---HHHHHHhhCCCeEEEEecCCCCCCcceeccCCeEEEEeecCCCCCCCCCchh-HHHHHHHHHHHHHH
Q 011969 14 DLGRSPRMQY---QALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVL-KPVLLLLKPLIQFF 89 (474)
Q Consensus 14 ~~g~~~r~~~---~a~~l~~~~g~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 89 (474)
|++.++.... ....|.++ ||+|.+.|.+... ..+.++..|+.+..+..+ +...+. +.+....+.
T Consensus 6 DI~n~~hvhfFk~lI~elekk-G~ev~iT~rd~~~-v~~LLd~ygf~~~~Igk~-----g~~tl~~Kl~~~~eR~----- 73 (346)
T COG1817 6 DIGNPPHVHFFKNLIWELEKK-GHEVLITCRDFGV-VTELLDLYGFPYKSIGKH-----GGVTLKEKLLESAERV----- 73 (346)
T ss_pred EcCCcchhhHHHHHHHHHHhC-CeEEEEEEeecCc-HHHHHHHhCCCeEeeccc-----CCccHHHHHHHHHHHH-----
Confidence 3455555444 34667776 9999988866443 336777888888888722 111121 111111111
Q ss_pred HHHHHHhhhcCCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhhhcCE
Q 011969 90 MLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANG 169 (474)
Q Consensus 90 ~~~~~~~~~~~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ 169 (474)
..+..+.. ..+||+.+.-+.+.++. .++..++|.|+-..+- ... .-++.....||.
T Consensus 74 ~~L~ki~~-~~kpdv~i~~~s~~l~r------vafgLg~psIi~~D~e-hA~----------------~qnkl~~Pla~~ 129 (346)
T COG1817 74 YKLSKIIA-EFKPDVAIGKHSPELPR------VAFGLGIPSIIFVDNE-HAE----------------AQNKLTLPLADV 129 (346)
T ss_pred HHHHHHHh-hcCCceEeecCCcchhh------HHhhcCCceEEecCCh-hHH----------------HHhhcchhhhhh
Confidence 01222222 27899987644333322 2445677877644333 100 124556678898
Q ss_pred EEEeCHHHHHHHHHHhCCc--eEEEeCCCC-----CCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchh
Q 011969 170 CLCVTQAMQHELAQNWGIK--ATVLYDQPP-----EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADET 242 (474)
Q Consensus 170 vi~vS~~~~~~l~~~~~~~--~~vi~n~~~-----~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (474)
+++.+-.....+.. +|.+ -.+-+|+.. ..|.|. .++.++||
T Consensus 130 ii~P~~~~~~~~~~-~G~~p~~i~~~~giae~~~v~~f~pd-----~evlkeLg-------------------------- 177 (346)
T COG1817 130 IITPEAIDEEELLD-FGADPNKISGYNGIAELANVYGFVPD-----PEVLKELG-------------------------- 177 (346)
T ss_pred eecccccchHHHHH-hCCCccceecccceeEEeecccCCCC-----HHHHHHcC--------------------------
Confidence 88888777766666 4554 233344422 225444 46677777
Q ss_pred hhhcccccccccCCCCCeEEEE-----EeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCC
Q 011969 243 IFTSLAGIDVFLKPNRPALVVS-----STSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPR 317 (474)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~i~~-----~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (474)
+.++.+++++= +.-....++.+.+.++++.+.+ ++
T Consensus 178 -----------l~~~~~yIVmRpe~~~A~y~~g~~~~~~~~~li~~l~k----------------------------~g- 217 (346)
T COG1817 178 -----------LEEGETYIVMRPEPWGAHYDNGDRGISVLPDLIKELKK----------------------------YG- 217 (346)
T ss_pred -----------CCCCCceEEEeeccccceeeccccchhhHHHHHHHHHh----------------------------Cc-
Confidence 33444434331 1112345677778888888766 23
Q ss_pred EEEEEEeCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecc
Q 011969 318 LLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY 397 (474)
Q Consensus 318 ~~l~ivG~g~~~~~~~~~~~~l~l~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~ 397 (474)
.+++-. ..+.++..+... ++... -+.-|--+++--|++.+- .| |.---||...|+|.|++.-
T Consensus 218 --iV~ipr---~~~~~eife~~~--n~i~p---k~~vD~l~Llyya~lvig-----~g---gTMarEaAlLGtpaIs~~p 279 (346)
T COG1817 218 --IVLIPR---EKEQAEIFEGYR--NIIIP---KKAVDTLSLLYYATLVIG-----AG---GTMAREAALLGTPAISCYP 279 (346)
T ss_pred --EEEecC---chhHHHHHhhhc--cccCC---cccccHHHHHhhhheeec-----CC---chHHHHHHHhCCceEEecC
Confidence 344432 222333444332 22222 123343446777787774 22 2345899999999999873
Q ss_pred c---ccccccccCCcEEEeC--CHHHHHHHHHHHHh
Q 011969 398 S---CIEELVKVDKNGLLFS--SSSELADQLLMLFK 428 (474)
Q Consensus 398 ~---~~~e~v~~~~~G~l~~--~~~~la~~i~~l~~ 428 (474)
| ...+... +.|.++. |+.+..+...+.+.
T Consensus 280 Gkll~vdk~li--e~G~~~~s~~~~~~~~~a~~~l~ 313 (346)
T COG1817 280 GKLLAVDKYLI--EKGLLYHSTDEIAIVEYAVRNLK 313 (346)
T ss_pred CccccccHHHH--hcCceeecCCHHHHHHHHHHHhh
Confidence 2 2333332 3567764 56555555555554
|
|
| >TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.13 Score=52.04 Aligned_cols=130 Identities=16% Similarity=0.067 Sum_probs=77.4
Q ss_pred CCCeEEEEEeecccCCCH--HHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCCh-HHHH
Q 011969 257 NRPALVVSSTSWTPDEDF--GILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK-ESYE 333 (474)
Q Consensus 257 ~~~~~i~~~G~l~~~k~~--~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~-~~~~ 333 (474)
+++.+++..|.=.+.|.. +...+.+..+.+ .+..++++|+++.+ +..+
T Consensus 178 ~~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~-----------------------------~~~~~vl~~g~~~e~~~~~ 228 (319)
T TIGR02193 178 PAPYAVLLHATSRDDKTWPEERWRELARLLLA-----------------------------RGLQIVLPWGNDAEKQRAE 228 (319)
T ss_pred CCCEEEEEeCCCcccCCCCHHHHHHHHHHHHH-----------------------------CCCeEEEeCCCHHHHHHHH
Confidence 455566666654455554 455566666544 24677777555543 4444
Q ss_pred HHHHHcCCCcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecccccccccccC--CcEE
Q 011969 334 EKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVD--KNGL 411 (474)
Q Consensus 334 ~~~~~l~l~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~~~~e~v~~~--~~G~ 411 (474)
+..+..+ +..+.|. .+-.++..+++.||++|. ..+| .+==|-|+|+|+|+--.+..+...... ....
T Consensus 229 ~i~~~~~--~~~l~g~-~sL~el~ali~~a~l~I~---~DSg-----p~HlAaa~g~P~i~lfg~t~p~~~~P~~~~~~~ 297 (319)
T TIGR02193 229 RIAEALP--GAVVLPK-MSLAEVAALLAGADAVVG---VDTG-----LTHLAAALDKPTVTLYGATDPGRTGGYGKPNVA 297 (319)
T ss_pred HHHhhCC--CCeecCC-CCHHHHHHHHHcCCEEEe---CCCh-----HHHHHHHcCCCEEEEECCCCHhhcccCCCCceE
Confidence 4444332 4466787 889999999999999998 4555 344467889999986432221111111 1112
Q ss_pred EeC------CHHHHHHHHHHH
Q 011969 412 LFS------SSSELADQLLML 426 (474)
Q Consensus 412 l~~------~~~~la~~i~~l 426 (474)
+.. ++++..+++.++
T Consensus 298 ~~~~~~~~I~~~~V~~ai~~~ 318 (319)
T TIGR02193 298 LLGESGANPTPDEVLAALEEL 318 (319)
T ss_pred EccCccCCCCHHHHHHHHHhh
Confidence 221 477888877765
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >PLN03007 UDP-glucosyltransferase family protein | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.76 Score=49.72 Aligned_cols=92 Identities=18% Similarity=0.248 Sum_probs=57.6
Q ss_pred CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecc----cccccccc-cCCcEEEe---
Q 011969 342 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY----SCIEELVK-VDKNGLLF--- 413 (474)
Q Consensus 342 ~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~----~~~~e~v~-~~~~G~l~--- 413 (474)
+++...+ |+|+. .+|.++++..+. +++. -+.++||+.+|+|+|+... ......+. .-+.|+-+
T Consensus 345 ~g~~v~~-w~PQ~---~iL~h~~v~~fv---tH~G--~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~~~~ 415 (482)
T PLN03007 345 KGLIIRG-WAPQV---LILDHQATGGFV---THCG--WNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSVGAK 415 (482)
T ss_pred CCEEEec-CCCHH---HHhccCccceee---ecCc--chHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEeccc
Confidence 4677764 68875 578888886663 3331 2489999999999999863 22222221 11233321
Q ss_pred -------C--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHh
Q 011969 414 -------S--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEM 447 (474)
Q Consensus 414 -------~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~ 447 (474)
+ +.++++++++.++.+ + +.+++|+++.++
T Consensus 416 ~~~~~~~~~~~~~~l~~av~~~m~~----~-~~~~~r~~a~~~ 453 (482)
T PLN03007 416 KLVKVKGDFISREKVEKAVREVIVG----E-EAEERRLRAKKL 453 (482)
T ss_pred cccccccCcccHHHHHHHHHHHhcC----c-HHHHHHHHHHHH
Confidence 1 588999999999975 2 234555555543
|
|
| >PRK14089 ipid-A-disaccharide synthase; Provisional | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.083 Score=54.73 Aligned_cols=184 Identities=12% Similarity=0.014 Sum_probs=102.6
Q ss_pred CCCCEEEEeCCCChhHHHHHHHHHhhC-CCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhhhcCEEEEeCHHHH
Q 011969 100 ASPDVFLVQNPPSVPTLVAVKWASSLR-RSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178 (474)
Q Consensus 100 ~~~Dvi~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~ 178 (474)
.+||++++-+.|.+..- +++.+++.. ++|+++.+----| -.+.+.. +.+.+.+|.++|.=....
T Consensus 75 ~~pd~~i~iD~p~Fnl~-lak~~k~~~~~i~viyyi~PqvW------AWr~~R~--------~~i~k~~d~vl~ifPFE~ 139 (347)
T PRK14089 75 KQADKVLLMDSSSFNIP-LAKKIKKAYPKKEIIYYILPQVW------AWKKGRA--------KILEKYCDFLASILPFEV 139 (347)
T ss_pred cCCCEEEEeCCCCCCHH-HHHHHHhcCCCCCEEEEECccce------eeCcchH--------HHHHHHHhhhhccCCCCH
Confidence 78999998887777655 456555543 7998875543211 0111111 233456777777655444
Q ss_pred HHHHHHhCCceEEEeCCCCCCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhcccccccccCCCC
Q 011969 179 HELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKPNR 258 (474)
Q Consensus 179 ~~l~~~~~~~~~vi~n~~~~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (474)
+.+ |.++..+=|...+...+. .. .+ .+.
T Consensus 140 ~~y----g~~~~~VGhPl~d~~~~~--------~~---------------------------------------~~-~~~ 167 (347)
T PRK14089 140 QFY----QSKATYVGHPLLDEIKEF--------KK---------------------------------------DL-DKE 167 (347)
T ss_pred HHh----CCCCEEECCcHHHhhhhh--------hh---------------------------------------hc-CCC
Confidence 333 666554433211111000 00 01 122
Q ss_pred CeEEEEEeecccC--CCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCChHHHHHHH
Q 011969 259 PALVVSSTSWTPD--EDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKI 336 (474)
Q Consensus 259 ~~~i~~~G~l~~~--k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~ 336 (474)
+.+.++-||-... +-+..+++++..+.++ ...+++.|... .+.+++..
T Consensus 168 ~~I~llPGSR~~Ei~~llP~~~~aa~~L~~~-----------------------------~~~~~i~~a~~-~~~i~~~~ 217 (347)
T PRK14089 168 GTIAFMPGSRKSEIKRLMPIFKELAKKLEGK-----------------------------EKILVVPSFFK-GKDLKEIY 217 (347)
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHHHhhc-----------------------------CcEEEEeCCCc-HHHHHHHH
Confidence 4466777764322 4455566777666541 26778877543 34455544
Q ss_pred HHcCCCcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEec
Q 011969 337 RRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS 396 (474)
Q Consensus 337 ~~l~l~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~ 396 (474)
.+. ..+.+. ++...+++.||+.++ .+ |.+.+|++.+|+|.|..-
T Consensus 218 ~~~--~~~~~~------~~~~~~m~~aDlal~----~S----GT~TLE~al~g~P~Vv~Y 261 (347)
T PRK14089 218 GDI--SEFEIS------YDTHKALLEAEFAFI----CS----GTATLEAALIGTPFVLAY 261 (347)
T ss_pred hcC--CCcEEe------ccHHHHHHhhhHHHh----cC----cHHHHHHHHhCCCEEEEE
Confidence 432 234443 245689999999998 33 347779999999999864
|
|
| >PLN02534 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.81 Score=49.70 Aligned_cols=117 Identities=17% Similarity=0.252 Sum_probs=68.2
Q ss_pred CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEeccc----cccc-ccccCCcEEEe---
Q 011969 342 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS----CIEE-LVKVDKNGLLF--- 413 (474)
Q Consensus 342 ~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~----~~~e-~v~~~~~G~l~--- 413 (474)
+++.+. .|+|+. .++.+.++..+. +++ =.+.++||+++|+|+|+.... .... +++.-+.|+-+
T Consensus 344 ~g~~v~-~w~pq~---~iL~h~~v~~fv---tH~--G~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~e~~~vGv~~~~~ 414 (491)
T PLN02534 344 RGLLIK-GWAPQV---LILSHPAIGGFL---THC--GWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIGVRVGVE 414 (491)
T ss_pred CCeecc-CCCCHH---HHhcCCccceEE---ecC--ccHHHHHHHHcCCCEEeccccccHHHHHHHHHHhhcceEEeccc
Confidence 355554 468874 478888886662 332 134899999999999997631 1111 12222333322
Q ss_pred --------------CCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccc--cchH---HHHHHHHHHHHHHHhhc
Q 011969 414 --------------SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLS--ARWA---TEWEEHAKPLITEVISQ 471 (474)
Q Consensus 414 --------------~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~w~---~~~~~~~~~~~~~~~~~ 471 (474)
-+.+++++++++++.. +.++.++||+++.++... .++. .++ +.++.++.++..|
T Consensus 415 ~~~~~~~~~~~~~~v~~eev~~~v~~~m~~---~~eeg~~~R~rA~elk~~a~~Av~~GGSS~-~nl~~fv~~i~~~ 487 (491)
T PLN02534 415 VPVRWGDEERVGVLVKKDEVEKAVKTLMDD---GGEEGERRRRRAQELGVMARKAMELGGSSH-INLSILIQDVLKQ 487 (491)
T ss_pred ccccccccccccCccCHHHHHHHHHHHhcc---ccccHHHHHHHHHHHHHHHHHHhcCCCcHH-HHHHHHHHHHHHH
Confidence 2577999999999862 123456677777664311 1121 233 3356677766654
|
|
| >cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS) | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.084 Score=52.37 Aligned_cols=73 Identities=26% Similarity=0.231 Sum_probs=53.6
Q ss_pred CEEEEEEeCCCChHHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEe
Q 011969 317 RLLFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV 395 (474)
Q Consensus 317 ~~~l~ivG~g~~~~~~~~~~~~l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~ 395 (474)
+++++++|...+++..++..+..+. +.+.+.|. .+-.++..+++.||++|. ..++ .+-=|.|+|+|+++-
T Consensus 153 ~~~ivl~g~~~e~~~~~~i~~~~~~~~~~~~~~~-~~l~e~~~li~~~~l~I~---~Dsg-----~~HlA~a~~~p~i~l 223 (279)
T cd03789 153 GARVVLTGGPAERELAEEIAAALGGPRVVNLAGK-TSLRELAALLARADLVVT---NDSG-----PMHLAAALGTPTVAL 223 (279)
T ss_pred CCEEEEEechhhHHHHHHHHHhcCCCccccCcCC-CCHHHHHHHHHhCCEEEe---eCCH-----HHHHHHHcCCCEEEE
Confidence 6788899977766666666555532 34556776 788999999999999998 3444 445567999999997
Q ss_pred ccc
Q 011969 396 SYS 398 (474)
Q Consensus 396 ~~~ 398 (474)
-.+
T Consensus 224 ~g~ 226 (279)
T cd03789 224 FGP 226 (279)
T ss_pred ECC
Confidence 543
|
Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.27 Score=50.50 Aligned_cols=100 Identities=23% Similarity=0.253 Sum_probs=71.8
Q ss_pred CCeEEEEEe-ecccCCCHH--HHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCChHHHHH
Q 011969 258 RPALVVSST-SWTPDEDFG--ILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEE 334 (474)
Q Consensus 258 ~~~~i~~~G-~l~~~k~~~--~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~ 334 (474)
+|.+++..| +-...|... ...+.+..+.++ ...++++|+..+.+..++
T Consensus 175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~-----------------------------~~~Vvl~g~~~e~e~~~~ 225 (334)
T COG0859 175 RPYIVINPGASRGSAKRWPLEHYAELAELLIAK-----------------------------GYQVVLFGGPDEEERAEE 225 (334)
T ss_pred CCeEEEeccccccccCCCCHHHHHHHHHHHHHC-----------------------------CCEEEEecChHHHHHHHH
Confidence 566777777 665666544 566666666552 378999998855566666
Q ss_pred HHHHcCCCcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEec
Q 011969 335 KIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS 396 (474)
Q Consensus 335 ~~~~l~l~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~ 396 (474)
..+.+.. .+.+.|. .+-.++..++..||++|. ..+| .+==|-|.|+|+|+.-
T Consensus 226 i~~~~~~-~~~l~~k-~sL~e~~~li~~a~l~I~---~DSg-----~~HlAaA~~~P~I~iy 277 (334)
T COG0859 226 IAKGLPN-AVILAGK-TSLEELAALIAGADLVIG---NDSG-----PMHLAAALGTPTIALY 277 (334)
T ss_pred HHHhcCC-ccccCCC-CCHHHHHHHHhcCCEEEc---cCCh-----HHHHHHHcCCCEEEEE
Confidence 6666542 2227787 889999999999999998 4566 4455889999999975
|
|
| >PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.054 Score=50.45 Aligned_cols=155 Identities=12% Similarity=0.036 Sum_probs=85.6
Q ss_pred CCCeEEEEecCCCCCCcceeccCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcCCCCEEEEeCCC
Q 011969 32 MSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPP 111 (474)
Q Consensus 32 ~g~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~~~ 111 (474)
.||+|..+|....... . +||+..++................+-.....-......+..+..+...||+|+.|...
T Consensus 2 ~gh~v~fl~~~~~~~~---~--~GV~~~~y~~~~~~~~~~~~~~~~~e~~~~rg~av~~a~~~L~~~Gf~PDvI~~H~GW 76 (171)
T PF12000_consen 2 RGHEVVFLTERKRPPI---P--PGVRVVRYRPPRGPTPGTHPYVRDFEAAVLRGQAVARAARQLRAQGFVPDVIIAHPGW 76 (171)
T ss_pred CCCEEEEEecCCCCCC---C--CCcEEEEeCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEcCCc
Confidence 4999999995543322 1 6999998874222222222222222222222233344455566666789999999854
Q ss_pred ChhHHHHHHHHHhh-CCCcEEEEecCchhhhhhhc--cC---CCc---hH-HHHHHHHHHHHhhhcCEEEEeCHHHHHHH
Q 011969 112 SVPTLVAVKWASSL-RRSAFIVDWHNFGYTLLSLS--LG---RRS---HF-VSIYRWIEKYYGKMANGCLCVTQAMQHEL 181 (474)
Q Consensus 112 ~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~--~~---~~~---~~-~~~~~~~e~~~~~~ad~vi~vS~~~~~~l 181 (474)
+-. ..++-. ...|+|...- +.|...... +. +.. .. .+............||..++.|...+..+
T Consensus 77 Ge~-----Lflkdv~P~a~li~Y~E-~~y~~~g~d~~FDpe~p~~~~~~~~~r~rN~~~l~~l~~~D~~isPT~wQ~~~f 150 (171)
T PF12000_consen 77 GET-----LFLKDVFPDAPLIGYFE-FYYRASGADVGFDPEFPPSLDDRARLRMRNAHNLLALEQADAGISPTRWQRSQF 150 (171)
T ss_pred chh-----hhHHHhCCCCcEEEEEE-EEecCCCCcCCCCCCCCCCHHHHHHHHHHhHHHHHHHHhCCcCcCCCHHHHHhC
Confidence 322 223333 4677665221 111111101 11 111 11 12223334444568999999999999888
Q ss_pred HHHhCCceEEEeCCCC
Q 011969 182 AQNWGIKATVLYDQPP 197 (474)
Q Consensus 182 ~~~~~~~~~vi~n~~~ 197 (474)
-..+..++.|+++|.+
T Consensus 151 P~~~r~kI~VihdGiD 166 (171)
T PF12000_consen 151 PAEFRSKISVIHDGID 166 (171)
T ss_pred CHHHHcCcEEeecccc
Confidence 7777788999999955
|
This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important. |
| >PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.19 Score=51.26 Aligned_cols=76 Identities=18% Similarity=0.153 Sum_probs=54.0
Q ss_pred CEEEEEEeCCCChHHHHHHHHHcC--CCcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEE
Q 011969 317 RLLFIITGKGPDKESYEEKIRRLR--LKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCA 394 (474)
Q Consensus 317 ~~~l~ivG~g~~~~~~~~~~~~l~--l~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia 394 (474)
...+.|+.+--...+.++..+++- ...+.+... -+..-+..+|..||.+++ +.... +=+.||++.|+||..
T Consensus 182 ~~~~~vttSRRTp~~~~~~L~~~~~~~~~~~~~~~-~~~nPy~~~La~ad~i~V---T~DSv---SMvsEA~~tG~pV~v 254 (311)
T PF06258_consen 182 GGSLLVTTSRRTPPEAEAALRELLKDNPGVYIWDG-TGENPYLGFLAAADAIVV---TEDSV---SMVSEAAATGKPVYV 254 (311)
T ss_pred CCeEEEEcCCCCcHHHHHHHHHhhcCCCceEEecC-CCCCcHHHHHHhCCEEEE---cCccH---HHHHHHHHcCCCEEE
Confidence 378899887655566666655543 256745454 456669999999999999 33331 258999999999998
Q ss_pred ecccc
Q 011969 395 VSYSC 399 (474)
Q Consensus 395 ~~~~~ 399 (474)
-...+
T Consensus 255 ~~l~~ 259 (311)
T PF06258_consen 255 LPLPG 259 (311)
T ss_pred ecCCC
Confidence 76543
|
The function of this family is unknown. |
| >PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.019 Score=61.73 Aligned_cols=79 Identities=18% Similarity=0.297 Sum_probs=52.5
Q ss_pred CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecc----cccccccccCCcEEEeC---
Q 011969 342 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY----SCIEELVKVDKNGLLFS--- 414 (474)
Q Consensus 342 ~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~----~~~~e~v~~~~~G~l~~--- 414 (474)
+|+... .|+|+.+ ++++..+-++ -++|. -+.+.||+.+|+|+|+... ......+++.+.|...+
T Consensus 323 ~n~~~~-~W~PQ~~---lL~hp~v~~f---itHgG--~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~G~g~~l~~~~ 393 (500)
T PF00201_consen 323 KNVLIV-KWLPQND---LLAHPRVKLF---ITHGG--LNSTQEALYHGVPMLGIPLFGDQPRNAARVEEKGVGVVLDKND 393 (500)
T ss_dssp TTEEEE-SS--HHH---HHTSTTEEEE---EES----HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHTTSEEEEGGGC
T ss_pred ceEEEe-ccccchh---hhhcccceee---eeccc--cchhhhhhhccCCccCCCCcccCCccceEEEEEeeEEEEEecC
Confidence 477665 5899854 4777766665 24442 3589999999999999863 34445566667787765
Q ss_pred -CHHHHHHHHHHHHhC
Q 011969 415 -SSSELADQLLMLFKG 429 (474)
Q Consensus 415 -~~~~la~~i~~l~~~ 429 (474)
+.+++.++|.+++++
T Consensus 394 ~~~~~l~~ai~~vl~~ 409 (500)
T PF00201_consen 394 LTEEELRAAIREVLEN 409 (500)
T ss_dssp -SHHHHHHHHHHHHHS
T ss_pred CcHHHHHHHHHHHHhh
Confidence 589999999999995
|
This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A .... |
| >PLN02670 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.083 Score=56.97 Aligned_cols=111 Identities=17% Similarity=0.166 Sum_probs=70.8
Q ss_pred EEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecc----cccccccccCCcEEEeC-----
Q 011969 344 VAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY----SCIEELVKVDKNGLLFS----- 414 (474)
Q Consensus 344 V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~----~~~~e~v~~~~~G~l~~----- 414 (474)
+.+. .|+|+.+ ++++.++..+. +++. -+.++||+++|+|+|+... ......+...+.|+.+.
T Consensus 341 ~vv~-~W~PQ~~---IL~H~~v~~Fv---tHcG--wnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~g~Gv~l~~~~~~ 411 (472)
T PLN02670 341 MIHV-GWVPQVK---ILSHESVGGFL---THCG--WNSVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLEVPRDERD 411 (472)
T ss_pred eEEe-CcCCHHH---HhcCcccceee---ecCC--cchHHHHHHcCCCEEeCcchhccHHHHHHHHHcCeeEEeeccccC
Confidence 4444 4788766 67788886663 3331 2489999999999999752 33344455567887762
Q ss_pred ---CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHH
Q 011969 415 ---SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEV 468 (474)
Q Consensus 415 ---~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 468 (474)
+.+++++++++++.+ +..+++++++.+.....+=...-++.++.+++.+
T Consensus 412 ~~~~~e~i~~av~~vm~~-----~~g~~~r~~a~~l~~~~~~~~~~~~~~~~~~~~l 463 (472)
T PLN02670 412 GSFTSDSVAESVRLAMVD-----DAGEEIRDKAKEMRNLFGDMDRNNRYVDELVHYL 463 (472)
T ss_pred CcCcHHHHHHHHHHHhcC-----cchHHHHHHHHHHHHHHhCcchhHHHHHHHHHHH
Confidence 478999999999974 2345677777765544433333444444444433
|
|
| >PLN02152 indole-3-acetate beta-glucosyltransferase | Back alignment and domain information |
|---|
Probab=95.93 E-value=3.1 Score=44.78 Aligned_cols=79 Identities=16% Similarity=0.204 Sum_probs=52.3
Q ss_pred CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecc----cccccccccC-CcEEEe---
Q 011969 342 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY----SCIEELVKVD-KNGLLF--- 413 (474)
Q Consensus 342 ~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~----~~~~e~v~~~-~~G~l~--- 413 (474)
++..+. .|+|+.+ ++.+.++..+. +++. -+.++||+.+|+|+|+... ......+.+. +.|+-.
T Consensus 327 ~~g~v~-~W~PQ~~---iL~h~~vg~fv---tH~G--~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~ 397 (455)
T PLN02152 327 EVGMIV-SWCSQIE---VLRHRAVGCFV---THCG--WSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVREN 397 (455)
T ss_pred CCeEEE-eeCCHHH---HhCCcccceEE---eeCC--cccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEeecC
Confidence 355454 5788765 68888887773 3331 2389999999999999753 2333333331 344443
Q ss_pred ----CCHHHHHHHHHHHHhC
Q 011969 414 ----SSSSELADQLLMLFKG 429 (474)
Q Consensus 414 ----~~~~~la~~i~~l~~~ 429 (474)
-+.+++++++++++++
T Consensus 398 ~~~~~~~e~l~~av~~vm~~ 417 (455)
T PLN02152 398 SEGLVERGEIRRCLEAVMEE 417 (455)
T ss_pred cCCcCcHHHHHHHHHHHHhh
Confidence 1578999999999963
|
|
| >COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.11 Score=58.39 Aligned_cols=135 Identities=16% Similarity=0.081 Sum_probs=98.6
Q ss_pred CCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCCh-----
Q 011969 255 KPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK----- 329 (474)
Q Consensus 255 ~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~----- 329 (474)
.++.. +++++-|++..|...+.+.-+..+.+.+. + -..|.+.+++.|+-...
T Consensus 484 ~p~~l-fd~~~kRiheYKRq~Lnl~~i~~ly~~i~----~------------------d~~prv~~iFaGKAhP~y~~aK 540 (750)
T COG0058 484 DPNAL-FDGQARRIHEYKRQLLNLLDIERLYRILK----E------------------DWVPRVQIIFAGKAHPADYAAK 540 (750)
T ss_pred CCCcc-eeeeehhhhhhhhhHHhHhhHHHHHHHHh----c------------------CCCCceEEEEeccCCCcchHHH
Confidence 34444 88999999999998888777666655311 1 12477777888864222
Q ss_pred ---HHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCC-CCCCchHHHHHHhcCCcEEEeccccccccc
Q 011969 330 ---ESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS-GLDLPMKVVDMFGCGLPVCAVSYSCIEELV 404 (474)
Q Consensus 330 ---~~~~~~~~~l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~-~e~~p~kv~Eama~G~PVia~~~~~~~e~v 404 (474)
..+.+.++..+. .+|.|+.- -+.+-...++..||+-..- |.. -|..|+.=+=++..|.+-|+|--|...|+.
T Consensus 541 ~iIk~I~~~a~~in~~lkVvFl~n-YdvslA~~iipa~Dvweqi--s~a~~EASGTsnMK~alNGaltigtlDGanvEi~ 617 (750)
T COG0058 541 EIIKLINDVADVINNKLKVVFLPN-YDVSLAELLIPAADVWEQI--PTAGKEASGTSNMKAALNGALTLGTLDGANVEIY 617 (750)
T ss_pred HHHHHHHHHHHhhcccceEEEeCC-CChhHHHhhcccccccccC--CCCCccccCcCcchHHhcCCceeeccccHHHHHH
Confidence 223334444443 47899877 6777888899999999982 333 377888888899999999999988888888
Q ss_pred c--cCCcEEEeCC
Q 011969 405 K--VDKNGLLFSS 415 (474)
Q Consensus 405 ~--~~~~G~l~~~ 415 (474)
+ .+.||+++.+
T Consensus 618 e~vg~~N~~~fG~ 630 (750)
T COG0058 618 EHVGGENGWIFGE 630 (750)
T ss_pred HhcCCCceEEeCC
Confidence 6 8899999974
|
|
| >PLN02764 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=95.64 E-value=0.17 Score=54.30 Aligned_cols=89 Identities=15% Similarity=0.122 Sum_probs=59.8
Q ss_pred CCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecc----ccccccc-ccCCcEEEe-------CCH
Q 011969 349 MWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY----SCIEELV-KVDKNGLLF-------SSS 416 (474)
Q Consensus 349 ~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~----~~~~e~v-~~~~~G~l~-------~~~ 416 (474)
.|+|+.+ ++++..+..+. +++. -++++||+.+|+|+|+... ......+ +.-+.|+-. -+.
T Consensus 323 ~W~PQ~~---vL~h~~v~~Fv---tH~G--~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~~~~~~~ 394 (453)
T PLN02764 323 GWVQQPL---ILSHPSVGCFV---SHCG--FGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREETGWFSK 394 (453)
T ss_pred CCCCHHH---HhcCcccCeEE---ecCC--chHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEeccccCCccCH
Confidence 5788876 56776665552 3321 2489999999999999863 2333444 334667653 157
Q ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc
Q 011969 417 SELADQLLMLFKGFPDDSDVLKKLRNGTLEMG 448 (474)
Q Consensus 417 ~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~ 448 (474)
+++.+++++++++ ..+..+++++++.++.
T Consensus 395 e~i~~av~~vm~~---~~~~g~~~r~~a~~~~ 423 (453)
T PLN02764 395 ESLRDAINSVMKR---DSEIGNLVKKNHTKWR 423 (453)
T ss_pred HHHHHHHHHHhcC---CchhHHHHHHHHHHHH
Confidence 8999999999974 2255677777777653
|
|
| >PLN02555 limonoid glucosyltransferase | Back alignment and domain information |
|---|
Probab=95.61 E-value=0.24 Score=53.59 Aligned_cols=93 Identities=16% Similarity=0.240 Sum_probs=60.5
Q ss_pred CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecc----cccccccccC-CcEEEe---
Q 011969 342 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY----SCIEELVKVD-KNGLLF--- 413 (474)
Q Consensus 342 ~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~----~~~~e~v~~~-~~G~l~--- 413 (474)
+++.+. .|+|+.+ ++.+..+..+. +++. -+.++||+.+|+|+|+... ......+.+. +.|+..
T Consensus 337 ~~g~v~-~W~PQ~~---iL~H~~v~~Fv---tH~G--~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~~~ 407 (480)
T PLN02555 337 DKGKIV-QWCPQEK---VLAHPSVACFV---THCG--WNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLCRG 407 (480)
T ss_pred CceEEE-ecCCHHH---HhCCCccCeEE---ecCC--cchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEccCC
Confidence 466655 4788765 56555554442 2321 2389999999999999863 2333333333 677666
Q ss_pred ---C---CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc
Q 011969 414 ---S---SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG 448 (474)
Q Consensus 414 ---~---~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~ 448 (474)
. +.++++.++++++.+ ++.+++|+++.++.
T Consensus 408 ~~~~~~v~~~~v~~~v~~vm~~-----~~g~~~r~ra~~l~ 443 (480)
T PLN02555 408 EAENKLITREEVAECLLEATVG-----EKAAELKQNALKWK 443 (480)
T ss_pred ccccCcCcHHHHHHHHHHHhcC-----chHHHHHHHHHHHH
Confidence 1 478999999999874 23567777777654
|
|
| >KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.49 E-value=0.16 Score=53.41 Aligned_cols=104 Identities=23% Similarity=0.311 Sum_probs=72.2
Q ss_pred HHHHHHHcCC-----C--cEEEecCCCC------cccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEeccc
Q 011969 332 YEEKIRRLRL-----K--RVAFRTMWLS------AEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS 398 (474)
Q Consensus 332 ~~~~~~~l~l-----~--~V~f~g~~v~------~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~ 398 (474)
+.+.+++.++ + +|.|.+.+++ .-|+.++.+.|.++|+ ||+.|.+|..-.|---+|+|-|+|+.+
T Consensus 457 iL~~iRr~~LFN~~~DRVKvifHPEFLss~sPllglDYeeFVRGCHLGVF---PSYYEPWGYTPAECTVMGiPSvtTNlS 533 (692)
T KOG3742|consen 457 ILSSIRRIGLFNSPSDRVKVIFHPEFLSSTSPLLGLDYEEFVRGCHLGVF---PSYYEPWGYTPAECTVMGIPSVTTNLS 533 (692)
T ss_pred HHHHhHhhhcccCcccceEEEecHHHhccCCCCcCCCHHHHhcccccccc---ccccCCCCCCchheEEecccccccccc
Confidence 5566777666 2 4667665554 3488999999999999 799999999999999999999999864
Q ss_pred c----cccccccCC-cEEEe-C--------CHHHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 011969 399 C----IEELVKVDK-NGLLF-S--------SSSELADQLLMLFKGFPDDSDVLKKLRNG 443 (474)
Q Consensus 399 ~----~~e~v~~~~-~G~l~-~--------~~~~la~~i~~l~~~~~~~~~~~~~~~~~ 443 (474)
| ++|.|.+.. .|+-+ + +.+.|++.+....+ ...++++-++
T Consensus 534 GFGcfMeehi~d~~ayGIYIvDRRfks~deSv~qL~~~m~~F~~-----qsRRQRIiqR 587 (692)
T KOG3742|consen 534 GFGCFMEEHIEDPQAYGIYIVDRRFKSPDESVQQLASFMYEFCK-----QSRRQRIIQR 587 (692)
T ss_pred chhhhHHHHhcCchhceEEEEecccCChhhHHHHHHHHHHHHHH-----HHHHHHHHHh
Confidence 4 456665543 34433 2 25566666666555 3445554443
|
|
| >PLN00164 glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=95.45 E-value=0.32 Score=52.67 Aligned_cols=110 Identities=16% Similarity=0.207 Sum_probs=67.1
Q ss_pred CCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecc----ccccccc-ccCCcEEEeC---------
Q 011969 349 MWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY----SCIEELV-KVDKNGLLFS--------- 414 (474)
Q Consensus 349 ~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~----~~~~e~v-~~~~~G~l~~--------- 414 (474)
.|+|+.+ ++.+.++..+. +++. -+.++||+++|+|+|+... ......+ +.-+.|+...
T Consensus 345 ~w~PQ~~---iL~h~~vg~fv---tH~G--wnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~~~~~~~ 416 (480)
T PLN00164 345 TWAPQKE---ILAHAAVGGFV---THCG--WNSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDRKRDNFV 416 (480)
T ss_pred ecCCHHH---HhcCcccCeEE---eecc--cchHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEeccccccCCcC
Confidence 4677655 67888876663 3221 2389999999999999752 3333333 4456777652
Q ss_pred CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccc--hH---HHHHHHHHHHHHHHhh
Q 011969 415 SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSAR--WA---TEWEEHAKPLITEVIS 470 (474)
Q Consensus 415 ~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--w~---~~~~~~~~~~~~~~~~ 470 (474)
+.+++++++++++.+ ..++.+++|+++.++....+ .+ .++ +.++.++.++..
T Consensus 417 ~~e~l~~av~~vm~~---~~~~~~~~r~~a~~~~~~~~~a~~~gGSS~-~~l~~~v~~~~~ 473 (480)
T PLN00164 417 EAAELERAVRSLMGG---GEEEGRKAREKAAEMKAACRKAVEEGGSSY-AALQRLAREIRH 473 (480)
T ss_pred cHHHHHHHHHHHhcC---CchhHHHHHHHHHHHHHHHHHHhcCCCcHH-HHHHHHHHHHHh
Confidence 478999999999974 12235667777766442111 11 233 345666666554
|
|
| >PLN03004 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=95.27 E-value=0.24 Score=53.18 Aligned_cols=79 Identities=14% Similarity=0.202 Sum_probs=56.2
Q ss_pred CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEec----ccccccccc-cCCcEEEeC--
Q 011969 342 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS----YSCIEELVK-VDKNGLLFS-- 414 (474)
Q Consensus 342 ~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~----~~~~~e~v~-~~~~G~l~~-- 414 (474)
+++.+. .|+|+.+ +++++++..+. +++. -+.++||+++|+|+|+.. .......+. .-+.|+..+
T Consensus 334 ~g~~v~-~W~PQ~~---iL~H~~v~~Fv---TH~G--~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~ 404 (451)
T PLN03004 334 KGMVVK-SWAPQVP---VLNHKAVGGFV---THCG--WNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISMNES 404 (451)
T ss_pred CcEEEE-eeCCHHH---HhCCCccceEe---ccCc--chHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEecCC
Confidence 356665 4688876 68899996663 4331 248999999999999985 333444443 347776662
Q ss_pred -----CHHHHHHHHHHHHhC
Q 011969 415 -----SSSELADQLLMLFKG 429 (474)
Q Consensus 415 -----~~~~la~~i~~l~~~ 429 (474)
+.+++++++++++.+
T Consensus 405 ~~~~~~~e~l~~av~~vm~~ 424 (451)
T PLN03004 405 ETGFVSSTEVEKRVQEIIGE 424 (451)
T ss_pred cCCccCHHHHHHHHHHHhcC
Confidence 578999999999974
|
|
| >PLN02167 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=95.16 E-value=0.45 Score=51.39 Aligned_cols=78 Identities=17% Similarity=0.225 Sum_probs=51.0
Q ss_pred cEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecc----ccccc-ccccCCcEEEeC---
Q 011969 343 RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY----SCIEE-LVKVDKNGLLFS--- 414 (474)
Q Consensus 343 ~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~----~~~~e-~v~~~~~G~l~~--- 414 (474)
+..+. .|+|+.+ ++.+..+..+.+.... +.++||+++|+|+|+... ..... +++.-+.|+...
T Consensus 341 rg~v~-~w~PQ~~---iL~h~~vg~fvtH~G~-----nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~ 411 (475)
T PLN02167 341 RGLVC-GWAPQVE---ILAHKAIGGFVSHCGW-----NSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRLDY 411 (475)
T ss_pred Ceeee-ccCCHHH---HhcCcccCeEEeeCCc-----ccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeeccc
Confidence 34444 5787765 6777666555322222 289999999999999752 22222 244556676541
Q ss_pred --------CHHHHHHHHHHHHhC
Q 011969 415 --------SSSELADQLLMLFKG 429 (474)
Q Consensus 415 --------~~~~la~~i~~l~~~ 429 (474)
+.+++++++++++.+
T Consensus 412 ~~~~~~~~~~~~l~~av~~~m~~ 434 (475)
T PLN02167 412 VSAYGEIVKADEIAGAVRSLMDG 434 (475)
T ss_pred ccccCCcccHHHHHHHHHHHhcC
Confidence 578999999999974
|
|
| >COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=94.93 E-value=1.7 Score=43.60 Aligned_cols=64 Identities=16% Similarity=0.370 Sum_probs=46.1
Q ss_pred EEE-EEEeCC-CChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEE
Q 011969 318 LLF-IITGKG-PDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCA 394 (474)
Q Consensus 318 ~~l-~ivG~g-~~~~~~~~~~~~l~l~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia 394 (474)
+.+ +++|.+ |....+++.++... ++.+. .+.++++.++..||+.+. +. |..+.||+..|+|.++
T Consensus 186 ~nl~iV~gs~~p~l~~l~k~~~~~~--~i~~~---~~~~dma~LMke~d~aI~----Aa----GstlyEa~~lgvP~l~ 251 (318)
T COG3980 186 VNLHIVVGSSNPTLKNLRKRAEKYP--NINLY---IDTNDMAELMKEADLAIS----AA----GSTLYEALLLGVPSLV 251 (318)
T ss_pred eeEEEEecCCCcchhHHHHHHhhCC--CeeeE---ecchhHHHHHHhcchhee----cc----chHHHHHHHhcCCceE
Confidence 344 344543 45566666666654 77777 458999999999999997 22 4589999999999443
|
|
| >PF04230 PS_pyruv_trans: Polysaccharide pyruvyl transferase; InterPro: IPR007345 Pyruvyl-transferases are involved in peptidoglycan-associated polymer biosynthesis | Back alignment and domain information |
|---|
Probab=94.86 E-value=2.9 Score=39.83 Aligned_cols=48 Identities=27% Similarity=0.327 Sum_probs=38.9
Q ss_pred CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecc
Q 011969 342 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY 397 (474)
Q Consensus 342 ~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~ 397 (474)
.++.......+.+++..+++.||++|. .... ..+=|+++|+|+|+.++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~Is---~RlH-----~~I~a~~~g~P~i~i~y 284 (286)
T PF04230_consen 237 FNVIIIDYSLSPDELLELISQADLVIS---MRLH-----GAILALSLGVPVIAISY 284 (286)
T ss_pred cceeEecCCCCHHHHHHHHhcCCEEEe---cCCH-----HHHHHHHcCCCEEEEec
Confidence 455555555889999999999999997 4444 67889999999999764
|
CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora [, ]. |
| >PLN02554 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=94.81 E-value=0.48 Score=51.27 Aligned_cols=78 Identities=13% Similarity=0.151 Sum_probs=51.7
Q ss_pred CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecc----cccc-cccccCCcEEEeC--
Q 011969 342 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY----SCIE-ELVKVDKNGLLFS-- 414 (474)
Q Consensus 342 ~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~----~~~~-e~v~~~~~G~l~~-- 414 (474)
+++.+. .|+|+.+ ++++..+..+. +++. -+.++||+.+|+|+|+... .... ..++.-+.|+..+
T Consensus 342 ~~g~v~-~W~PQ~~---iL~H~~v~~Fv---tH~G--~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~~ 412 (481)
T PLN02554 342 DIGKVI-GWAPQVA---VLAKPAIGGFV---THCG--WNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRKY 412 (481)
T ss_pred cCceEE-eeCCHHH---HhCCcccCccc---ccCc--cchHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEeecc
Confidence 356555 5788765 56666665552 3331 2389999999999999853 2222 3344556666541
Q ss_pred -------------CHHHHHHHHHHHHh
Q 011969 415 -------------SSSELADQLLMLFK 428 (474)
Q Consensus 415 -------------~~~~la~~i~~l~~ 428 (474)
+.+++++++++++.
T Consensus 413 ~~~~~~~~~~~~~~~e~l~~av~~vm~ 439 (481)
T PLN02554 413 WRGDLLAGEMETVTAEEIERGIRCLME 439 (481)
T ss_pred ccccccccccCeEcHHHHHHHHHHHhc
Confidence 57899999999996
|
|
| >PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=94.70 E-value=0.085 Score=44.22 Aligned_cols=83 Identities=14% Similarity=0.129 Sum_probs=57.2
Q ss_pred EEEEeC-CCChHHHHHHHHHcCCCcEEE--ecCCCCccc--HHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEE
Q 011969 320 FIITGK-GPDKESYEEKIRRLRLKRVAF--RTMWLSAED--YPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCA 394 (474)
Q Consensus 320 l~ivG~-g~~~~~~~~~~~~l~l~~V~f--~g~~v~~~~--~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia 394 (474)
++|+|+ ......+++.+++.|.+.+.+ .+. ..... ++..++.||++|++...-+....-..--+|-..|+|++.
T Consensus 2 vliVGG~~~~~~~~~~~~~~~G~~~~~hg~~~~-~~~~~~~l~~~i~~aD~VIv~t~~vsH~~~~~vk~~akk~~ip~~~ 80 (97)
T PF10087_consen 2 VLIVGGREDRERRYKRILEKYGGKLIHHGRDGG-DEKKASRLPSKIKKADLVIVFTDYVSHNAMWKVKKAAKKYGIPIIY 80 (97)
T ss_pred EEEEcCCcccHHHHHHHHHHcCCEEEEEecCCC-CccchhHHHHhcCCCCEEEEEeCCcChHHHHHHHHHHHHcCCcEEE
Confidence 567775 456688999999999876666 333 33444 999999999999963322333333455566778999999
Q ss_pred ecccccccc
Q 011969 395 VSYSCIEEL 403 (474)
Q Consensus 395 ~~~~~~~e~ 403 (474)
+...+...+
T Consensus 81 ~~~~~~~~l 89 (97)
T PF10087_consen 81 SRSRGVSSL 89 (97)
T ss_pred ECCCCHHHH
Confidence 886555443
|
|
| >PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=94.36 E-value=0.12 Score=50.12 Aligned_cols=103 Identities=14% Similarity=0.183 Sum_probs=60.7
Q ss_pred CCCCeEEEEEeecccCCCHHH--HHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCCh-HHH
Q 011969 256 PNRPALVVSSTSWTPDEDFGI--LLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK-ESY 332 (474)
Q Consensus 256 ~~~~~~i~~~G~l~~~k~~~~--Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~-~~~ 332 (474)
.+++.+++..|.-.+.|.... ..+.+..+.+ ....++++|.+.+. ++.
T Consensus 103 ~~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~-----------------------------~~~~vvl~g~~~~~~~~~ 153 (247)
T PF01075_consen 103 KDKPYIGINPGASWPSKRWPAEKWAELIERLKE-----------------------------RGYRVVLLGGPEEQEKEI 153 (247)
T ss_dssp TTSSEEEEE---SSGGGS--HHHHHHHHHHHCC-----------------------------CT-EEEE--SSHHHHHHH
T ss_pred ccCCeEEEeecCCCccccCCHHHHHHHHHHHHh-----------------------------hCceEEEEccchHHHHHH
Confidence 456667777777666666544 5555555533 22788888976552 222
Q ss_pred -HHHHHHcCCCcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEec
Q 011969 333 -EEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS 396 (474)
Q Consensus 333 -~~~~~~l~l~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~ 396 (474)
++..+...-+.+.+.|. .+-.++..+++.||++|. ..+| .+==|.|+|+|+|+--
T Consensus 154 ~~~~~~~~~~~~~~~~~~-~~l~e~~ali~~a~~~I~---~Dtg-----~~HlA~a~~~p~v~lf 209 (247)
T PF01075_consen 154 ADQIAAGLQNPVINLAGK-TSLRELAALISRADLVIG---NDTG-----PMHLAAALGTPTVALF 209 (247)
T ss_dssp HHHHHTTHTTTTEEETTT-S-HHHHHHHHHTSSEEEE---ESSH-----HHHHHHHTT--EEEEE
T ss_pred HHHHHHhcccceEeecCC-CCHHHHHHHHhcCCEEEe---cCCh-----HHHHHHHHhCCEEEEe
Confidence 22223222236888888 899999999999999999 4555 4556889999999974
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A. |
| >PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes | Back alignment and domain information |
|---|
Probab=94.20 E-value=0.48 Score=47.33 Aligned_cols=86 Identities=12% Similarity=0.137 Sum_probs=58.8
Q ss_pred hcCCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhh-hccCC----------CchHHHHHHHHHHHHhhh
Q 011969 98 KIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLS-LSLGR----------RSHFVSIYRWIEKYYGKM 166 (474)
Q Consensus 98 ~~~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~-~~~~~----------~~~~~~~~~~~e~~~~~~ 166 (474)
...+.|++|+.+..+ +.+++..++..+|.|+++|=|+. |+-.. ..... +..+.+++..+-+.+++.
T Consensus 169 ~lP~advyHsvstGy--Agl~g~~~k~~~g~P~lLTEHGI-Y~RER~~ei~~a~w~~~~~~~r~~wi~~f~~l~~~~Y~~ 245 (268)
T PF11997_consen 169 PLPKADVYHSVSTGY--AGLLGALAKYRYGRPFLLTEHGI-YTREREIEILQADWIWESPYVRDLWIRFFESLSRLAYRA 245 (268)
T ss_pred cCCCCCEEecCCccH--HHHHHHHHHHHhCCCEEEecCCc-cHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHh
Confidence 446889999988533 34457778888999999999998 33211 00101 112236677888899999
Q ss_pred cCEEEEeCHHHHHHHHHHhCC
Q 011969 167 ANGCLCVTQAMQHELAQNWGI 187 (474)
Q Consensus 167 ad~vi~vS~~~~~~l~~~~~~ 187 (474)
||.|+++.+..++ .+...|.
T Consensus 246 Ad~I~~l~~~n~~-~q~~~Ga 265 (268)
T PF11997_consen 246 ADRITPLYEYNRE-WQIELGA 265 (268)
T ss_pred hCeecccchhhHH-HHHHhCC
Confidence 9999999998664 4444454
|
It is typically between 259 to 282 amino acids in length. This region is found N-terminal PF00534 from PFAM. There are two conserved sequence motifs: GGVS and EHGIY. |
| >PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=94.09 E-value=1.6 Score=47.33 Aligned_cols=77 Identities=19% Similarity=0.216 Sum_probs=49.7
Q ss_pred cEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecc----ccccccc-ccCCcEEEeC---
Q 011969 343 RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY----SCIEELV-KVDKNGLLFS--- 414 (474)
Q Consensus 343 ~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~----~~~~e~v-~~~~~G~l~~--- 414 (474)
++.+.+ |+|+. .++.+..+.++. +++. -+.++||+++|+|+|+... ......+ +.-+.|+...
T Consensus 344 g~~v~~-w~PQ~---~vL~h~~v~~fv---tH~G--~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~~~ 414 (477)
T PLN02863 344 GLVIRG-WAPQV---AILSHRAVGAFL---THCG--WNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCEGA 414 (477)
T ss_pred CEEecC-CCCHH---HHhcCCCcCeEE---ecCC--chHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEeccCC
Confidence 555554 68874 467775555552 2221 2389999999999999753 3333433 3346776651
Q ss_pred ----CHHHHHHHHHHHHh
Q 011969 415 ----SSSELADQLLMLFK 428 (474)
Q Consensus 415 ----~~~~la~~i~~l~~ 428 (474)
+.+++++++.+++.
T Consensus 415 ~~~~~~~~v~~~v~~~m~ 432 (477)
T PLN02863 415 DTVPDSDELARVFMESVS 432 (477)
T ss_pred CCCcCHHHHHHHHHHHhh
Confidence 46789999998874
|
|
| >PRK14986 glycogen phosphorylase; Provisional | Back alignment and domain information |
|---|
Probab=93.98 E-value=0.51 Score=53.75 Aligned_cols=144 Identities=15% Similarity=0.169 Sum_probs=99.2
Q ss_pred cCCCCCeEEEEEeecccCCCHHH-HHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCCh---
Q 011969 254 LKPNRPALVVSSTSWTPDEDFGI-LLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK--- 329 (474)
Q Consensus 254 ~~~~~~~~i~~~G~l~~~k~~~~-Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~--- 329 (474)
+.++. ++++++-|++..|...+ ++..+..+.+ |.+++........+++.|+-...
T Consensus 539 ldp~s-Lfd~qakR~heYKRq~LNil~~i~ry~~--------------------i~~~p~~~~~P~~~IFaGKAaP~y~~ 597 (815)
T PRK14986 539 VNPKA-LFDVQIKRIHEYKRQLMNVLHVITRYNR--------------------IKADPDAKWVPRVNIFAGKAASAYYM 597 (815)
T ss_pred cCccc-ceeeeehhhhhhhhhhHHHhhhHHHHHH--------------------HHhCCCcCCCCeEEEEeecCCCCcHH
Confidence 34444 37889999999999988 7777776654 22222222234788888864221
Q ss_pred -HHH----HHHHH----HcCC-C--cEEEecCCCCcccHHHHHhcccEEEeeccCC-CCCCCchHHHHHHhcCCcEEEec
Q 011969 330 -ESY----EEKIR----RLRL-K--RVAFRTMWLSAEDYPLLLGSADLGVCLHTSS-SGLDLPMKVVDMFGCGLPVCAVS 396 (474)
Q Consensus 330 -~~~----~~~~~----~l~l-~--~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s-~~e~~p~kv~Eama~G~PVia~~ 396 (474)
..+ .+.++ +-.+ + +|.|+.- .+.+-...++..||+-..- |. ..|..|..=+=+|..|.+-++|-
T Consensus 598 aK~iIk~I~~va~~in~Dp~v~~~lkVVFlen-Y~vslAe~lipg~Dv~eqi--s~ag~EASGTsnMK~alNGaLtlgtl 674 (815)
T PRK14986 598 AKHIIHLINDVAKVINNDPQIGDKLKVVFIPN-YSVSLAQLIIPAADLSEQI--SLAGTEASGTSNMKFALNGALTIGTL 674 (815)
T ss_pred HHHHHHHHHHHHHHhccChhhcCceeEEEeCC-CCHHHHHHhhhhhhhhhhC--CCCCccccCcchhhHHhcCceeeecc
Confidence 122 22233 1112 2 6999876 6778888899999999983 33 33777777888999999999999
Q ss_pred cccccccccc--CCcEEEeC-CHHHHHH
Q 011969 397 YSCIEELVKV--DKNGLLFS-SSSELAD 421 (474)
Q Consensus 397 ~~~~~e~v~~--~~~G~l~~-~~~~la~ 421 (474)
-|...|+.++ ++||+++. +.+++.+
T Consensus 675 DG~nvEi~e~vG~eN~~~fG~~~~ev~~ 702 (815)
T PRK14986 675 DGANVEMLEHVGEENIFIFGNTAEEVEA 702 (815)
T ss_pred CCchhHHHHhcCCCcEEEeCCCHHHHHH
Confidence 8988888875 78999996 4555544
|
|
| >PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional | Back alignment and domain information |
|---|
Probab=93.58 E-value=0.98 Score=45.80 Aligned_cols=69 Identities=14% Similarity=0.054 Sum_probs=48.5
Q ss_pred CEEEEEEeCCC-ChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEe
Q 011969 317 RLLFIITGKGP-DKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV 395 (474)
Q Consensus 317 ~~~l~ivG~g~-~~~~~~~~~~~l~l~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~ 395 (474)
+..+++.|+++ +++..++.++. .+++.+.|. .+-.++..+++.||++|. ..+| .+==|-|+|+|+|+-
T Consensus 210 ~~~ivl~~G~~~e~~~~~~i~~~--~~~~~l~g~-~sL~elaali~~a~l~I~---nDSG-----p~HlA~A~g~p~val 278 (322)
T PRK10964 210 GLRIKLPWGAEHEEQRAKRLAEG--FPYVEVLPK-LSLEQVARVLAGAKAVVS---VDTG-----LSHLTAALDRPNITL 278 (322)
T ss_pred CCeEEEeCCCHHHHHHHHHHHcc--CCcceecCC-CCHHHHHHHHHhCCEEEe---cCCc-----HHHHHHHhCCCEEEE
Confidence 45677763344 44444443332 245777787 899999999999999998 4566 455588999999986
Q ss_pred c
Q 011969 396 S 396 (474)
Q Consensus 396 ~ 396 (474)
-
T Consensus 279 f 279 (322)
T PRK10964 279 Y 279 (322)
T ss_pred E
Confidence 4
|
|
| >cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases | Back alignment and domain information |
|---|
Probab=92.84 E-value=1 Score=51.41 Aligned_cols=144 Identities=15% Similarity=0.163 Sum_probs=98.7
Q ss_pred cCCCCCeEEEEEeecccCCCHHH-HHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCCh---
Q 011969 254 LKPNRPALVVSSTSWTPDEDFGI-LLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK--- 329 (474)
Q Consensus 254 ~~~~~~~~i~~~G~l~~~k~~~~-Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~--- 329 (474)
+.++.- ..+++-|++..|...+ ++..+..+.+ |.+++........+++.|+-...
T Consensus 526 ldp~sl-fdvq~KR~heYKRq~LNil~ii~~y~~--------------------i~~~p~~~~~P~~~IFaGKAaP~y~~ 584 (797)
T cd04300 526 VDPDSL-FDVQVKRIHEYKRQLLNVLHIIHLYNR--------------------IKENPNADIVPRTFIFGGKAAPGYYM 584 (797)
T ss_pred cCCCcc-EEEEeeechhhhhhhhHHHhhHHHHHH--------------------HHhCCCcCCCCeEEEEeccCCCCcHH
Confidence 344443 7889999999999998 7777776654 22232222234788888864221
Q ss_pred -HHHHHHHHHc--------CC-C--cEEEecCCCCcccHHHHHhcccEEEeeccCC-CCCCCchHHHHHHhcCCcEEEec
Q 011969 330 -ESYEEKIRRL--------RL-K--RVAFRTMWLSAEDYPLLLGSADLGVCLHTSS-SGLDLPMKVVDMFGCGLPVCAVS 396 (474)
Q Consensus 330 -~~~~~~~~~l--------~l-~--~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s-~~e~~p~kv~Eama~G~PVia~~ 396 (474)
..+-+.+..+ .+ + +|.|+.- -+.+-...++..||+-..- |. .-|..|..=+=+|..|.+.++|-
T Consensus 585 aK~iIklI~~va~~in~Dp~v~~~lkVVFlen-Y~VslAe~iipaaDvseqi--s~ag~EASGTsnMK~~lNGaltlgtl 661 (797)
T cd04300 585 AKLIIKLINAVADVVNNDPDVGDKLKVVFLPN-YNVSLAEKIIPAADLSEQI--STAGKEASGTGNMKFMLNGALTIGTL 661 (797)
T ss_pred HHHHHHHHHHHHHHhccChhcCCceEEEEeCC-CChHHHHHhhhhhhhhhhC--CCCCccccCCchhhHHhcCceeeecc
Confidence 2222222221 12 2 6899876 6778888999999999982 33 33777777788999999999998
Q ss_pred cccccccccc--CCcEEEeC-CHHHHHH
Q 011969 397 YSCIEELVKV--DKNGLLFS-SSSELAD 421 (474)
Q Consensus 397 ~~~~~e~v~~--~~~G~l~~-~~~~la~ 421 (474)
-|...|+.+. ++|++++. +.+++.+
T Consensus 662 DGanvEi~e~vG~eN~fiFG~~~~ev~~ 689 (797)
T cd04300 662 DGANVEIAEEVGEENIFIFGLTAEEVEA 689 (797)
T ss_pred cchhHHHHHHhCcCcEEEeCCCHHHHHH
Confidence 8888888776 78999996 5555443
|
It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PLN02207 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=92.67 E-value=2.9 Score=45.12 Aligned_cols=78 Identities=17% Similarity=0.180 Sum_probs=51.2
Q ss_pred CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecc----cccccc-cccCCcEEEe---
Q 011969 342 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY----SCIEEL-VKVDKNGLLF--- 413 (474)
Q Consensus 342 ~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~----~~~~e~-v~~~~~G~l~--- 413 (474)
+++.+. .|+|+.+ ++++..+..+. +++. -+.++||+.+|+|+|+... ...... ++..+.|+-+
T Consensus 332 ~~g~i~-~W~PQ~~---IL~H~~vg~Fv---TH~G--wnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~~ 402 (468)
T PLN02207 332 GRGMIC-GWSPQVE---ILAHKAVGGFV---SHCG--WNSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKLD 402 (468)
T ss_pred CCeEEE-EeCCHHH---Hhcccccceee---ecCc--cccHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEEecc
Confidence 355555 5788876 46666675552 3321 1388999999999999753 233333 3335666632
Q ss_pred --------CCHHHHHHHHHHHHh
Q 011969 414 --------SSSSELADQLLMLFK 428 (474)
Q Consensus 414 --------~~~~~la~~i~~l~~ 428 (474)
-+.+++++++++++.
T Consensus 403 ~~~~~~~~v~~e~i~~av~~vm~ 425 (468)
T PLN02207 403 YRVHSDEIVNANEIETAIRCVMN 425 (468)
T ss_pred cccccCCcccHHHHHHHHHHHHh
Confidence 157899999999996
|
|
| >PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2 | Back alignment and domain information |
|---|
Probab=92.27 E-value=3.9 Score=44.20 Aligned_cols=77 Identities=10% Similarity=-0.142 Sum_probs=49.9
Q ss_pred CCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCchHHH-----HHHHHHHHHhhhcCEEEEeC
Q 011969 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVS-----IYRWIEKYYGKMANGCLCVT 174 (474)
Q Consensus 100 ~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~-----~~~~~e~~~~~~ad~vi~vS 174 (474)
..||+||.|. ....+++.+++...++|.+.+.|.++-+.+..+.-.+..+.. .....|...++.||.||+-|
T Consensus 400 ~~PdlI~GnY---sDgnlvA~LLs~~lgv~~~~iaHsLek~Ky~~s~~~w~e~e~~Yhfs~qftAd~iamn~adfIItST 476 (550)
T PF00862_consen 400 GKPDLIIGNY---SDGNLVASLLSRKLGVTQCFIAHSLEKTKYEDSDLYWKEIEEKYHFSCQFTADLIAMNAADFIITST 476 (550)
T ss_dssp S--SEEEEEH---HHHHHHHHHHHHHHT-EEEEE-SS-HHHHHHTTTTTSHHHHHHH-HHHHHHHHHHHHHHSSEEEESS
T ss_pred CCCcEEEecc---CcchHHHHHHHhhcCCceehhhhccccccccccCCCHHHHHhhccchhhhhHHHHHhhcCCEEEEcc
Confidence 6899999987 677777888888889999999999985444322222333321 12244677788999999999
Q ss_pred HHHHH
Q 011969 175 QAMQH 179 (474)
Q Consensus 175 ~~~~~ 179 (474)
.....
T Consensus 477 ~QEI~ 481 (550)
T PF00862_consen 477 YQEIA 481 (550)
T ss_dssp HHHHH
T ss_pred hHhhc
Confidence 85543
|
4.1.13 from EC in the following reaction: |
| >PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=92.24 E-value=4.2 Score=45.92 Aligned_cols=143 Identities=15% Similarity=0.157 Sum_probs=87.1
Q ss_pred cCCCCCeEEEEEeecccCCCHHH-HHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCCh---
Q 011969 254 LKPNRPALVVSSTSWTPDEDFGI-LLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK--- 329 (474)
Q Consensus 254 ~~~~~~~~i~~~G~l~~~k~~~~-Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~--- 329 (474)
+.++. +..+++-|++..|...+ ++..+..+.+ |.+++........+++.|+-...
T Consensus 440 ldp~s-lfdv~~rR~heYKRq~LniL~ii~~y~r--------------------ik~~p~~~~~Pv~~IFaGKAhP~d~~ 498 (713)
T PF00343_consen 440 LDPDS-LFDVQARRFHEYKRQLLNILHIIDRYNR--------------------IKNNPNKKIRPVQFIFAGKAHPGDYM 498 (713)
T ss_dssp --TTS-EEEEEES-SCCCCTHHHHHHHHHHHHHH--------------------HHHSTTSCCS-EEEEEE----TT-HH
T ss_pred CCcch-hhhhhhhhcccccccCcccccHHHHHHH--------------------HHhcccCCCCCeEEEEeccCCCCcHH
Confidence 33443 47789999999999888 4455555433 22222222334789999965222
Q ss_pred -HHHHHHHHH--------cCC-C--cEEEecCCCCcccHHHHHhcccEEEeeccCCC-CCCCchHHHHHHhcCCcEEEec
Q 011969 330 -ESYEEKIRR--------LRL-K--RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS-GLDLPMKVVDMFGCGLPVCAVS 396 (474)
Q Consensus 330 -~~~~~~~~~--------l~l-~--~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~-~e~~p~kv~Eama~G~PVia~~ 396 (474)
.++-+.+.. -.+ + +|.|+.- -+-+-...++..|||-+.- |.. .|..|..=+=+|..|.+-+++-
T Consensus 499 gK~iIk~I~~va~~in~Dp~v~~~lkVvFlen-YdvslA~~lipg~DVwln~--p~~p~EASGTSgMK~~~NGaL~lstl 575 (713)
T PF00343_consen 499 GKEIIKLINNVAEVINNDPEVGDRLKVVFLEN-YDVSLAEKLIPGVDVWLNI--PTRPKEASGTSGMKAAMNGALNLSTL 575 (713)
T ss_dssp HHHHHHHHHHHHHHHCT-TTTCCGEEEEEETT--SHHHHHHHGGG-SEEEE-----TTSSSS-SHHHHHHHTT-EEEEES
T ss_pred HHHHHHHHHHHHHHHhcChhhccceeEEeecC-CcHHHHHHHhhhhhhhhhC--CCCCccccCCCcchhhcCCCeEEecc
Confidence 222222222 123 2 6899976 6777888899999999983 333 4888999999999999999998
Q ss_pred cccccccccc--CCcEEEeC-CHHHHH
Q 011969 397 YSCIEELVKV--DKNGLLFS-SSSELA 420 (474)
Q Consensus 397 ~~~~~e~v~~--~~~G~l~~-~~~~la 420 (474)
-|...|+.+. .+|.+++. +.+++.
T Consensus 576 DG~niEi~e~vG~eN~fiFG~~~~ev~ 602 (713)
T PF00343_consen 576 DGWNIEIAEAVGEENIFIFGLTAEEVE 602 (713)
T ss_dssp STCHHHHHHHH-GGGSEEES-BHHHHH
T ss_pred cchhHHHHHhcCCCcEEEcCCCHHHHH
Confidence 8888887653 46889997 555543
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B .... |
| >TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=92.04 E-value=1.2 Score=50.83 Aligned_cols=144 Identities=16% Similarity=0.155 Sum_probs=99.1
Q ss_pred cCCCCCeEEEEEeecccCCCHHH-HHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCCh---
Q 011969 254 LKPNRPALVVSSTSWTPDEDFGI-LLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK--- 329 (474)
Q Consensus 254 ~~~~~~~~i~~~G~l~~~k~~~~-Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~--- 329 (474)
+.++.- ..+++-|++..|...+ ++..+..+.+ |.+++........+++.|+-...
T Consensus 523 ldp~sl-fdvq~KR~heYKRq~LNil~ii~~y~~--------------------i~~~p~~~~~P~~~IFaGKAaP~y~~ 581 (794)
T TIGR02093 523 VDPNSI-FDVQVKRLHEYKRQLLNVLHVIYLYNR--------------------IKEDPPKDIVPRTVIFGGKAAPGYHM 581 (794)
T ss_pred cCcccc-chhhheechhhhHHHHHHhhhHHHHHH--------------------HHhCCCcCCCCeEEEEEecCCCCcHH
Confidence 344443 7788999999999888 7777776655 22222222234688888864221
Q ss_pred -HHHHHHHHHcC--------C-C--cEEEecCCCCcccHHHHHhcccEEEeeccCC-CCCCCchHHHHHHhcCCcEEEec
Q 011969 330 -ESYEEKIRRLR--------L-K--RVAFRTMWLSAEDYPLLLGSADLGVCLHTSS-SGLDLPMKVVDMFGCGLPVCAVS 396 (474)
Q Consensus 330 -~~~~~~~~~l~--------l-~--~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s-~~e~~p~kv~Eama~G~PVia~~ 396 (474)
..+-+.+-... + + +|.|+.- -+.+-...++..||+-..- |. .-|..|..=+=+|..|.+-++|-
T Consensus 582 aK~iIklI~~va~~iN~Dp~v~~~lkVVFlen-Y~VslAe~iipaaDvseqi--stag~EASGTsnMK~alNGaltlgtl 658 (794)
T TIGR02093 582 AKLIIKLINSVAEVVNNDPAVGDKLKVVFVPN-YNVSLAELIIPAADLSEQI--STAGKEASGTGNMKFMLNGALTIGTL 658 (794)
T ss_pred HHHHHHHHHHHHHHhccChhhCCceeEEEeCC-CChHHHHHhhhhhhhhhhC--CCCCccccCcchhHHHhcCcceeecc
Confidence 22222222222 2 2 6999976 6778888999999999983 33 33777777788999999999998
Q ss_pred cccccccccc--CCcEEEeC-CHHHHHH
Q 011969 397 YSCIEELVKV--DKNGLLFS-SSSELAD 421 (474)
Q Consensus 397 ~~~~~e~v~~--~~~G~l~~-~~~~la~ 421 (474)
-|...|+.++ ++|++++. +.+++.+
T Consensus 659 DGanvEi~e~vG~eN~fiFG~~~~ev~~ 686 (794)
T TIGR02093 659 DGANVEIREEVGAENIFIFGLTVEEVEA 686 (794)
T ss_pred cchhHHHHHHhCcccEEEcCCCHHHHHH
Confidence 8888888776 78999996 5555443
|
This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources. |
| >PLN03015 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=91.72 E-value=22 Score=38.46 Aligned_cols=89 Identities=18% Similarity=0.200 Sum_probs=57.9
Q ss_pred CCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecc----ccccccc-ccCCcEEEeC--------C
Q 011969 349 MWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY----SCIEELV-KVDKNGLLFS--------S 415 (474)
Q Consensus 349 ~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~----~~~~e~v-~~~~~G~l~~--------~ 415 (474)
.|+|+.+ ++.+..+..+. +++. -+.++||+.+|+|+|+... ......+ +.-+.|+-.. +
T Consensus 341 ~W~PQ~~---vL~h~~vg~fv---tH~G--wnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~~~~~~~~~~~v~ 412 (470)
T PLN03015 341 QWAPQVE---ILSHRSIGGFL---SHCG--WSSVLESLTKGVPIVAWPLYAEQWMNATLLTEEIGVAVRTSELPSEKVIG 412 (470)
T ss_pred ecCCHHH---HhccCccCeEE---ecCC--chhHHHHHHcCCCEEecccccchHHHHHHHHHHhCeeEEecccccCCccC
Confidence 5788876 46677776663 3221 2389999999999999753 2222333 4446666652 4
Q ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc
Q 011969 416 SSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG 448 (474)
Q Consensus 416 ~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~ 448 (474)
.++++++++.++.. ..++.++||+++.++.
T Consensus 413 ~e~i~~~v~~lm~~---~~eeg~~~R~ra~~lk 442 (470)
T PLN03015 413 REEVASLVRKIVAE---EDEEGQKIRAKAEEVR 442 (470)
T ss_pred HHHHHHHHHHHHcc---CcccHHHHHHHHHHHH
Confidence 78999999999952 1234567777777654
|
|
| >PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT | Back alignment and domain information |
|---|
Probab=90.78 E-value=3 Score=41.18 Aligned_cols=70 Identities=19% Similarity=0.246 Sum_probs=45.8
Q ss_pred CCCEEEEEEeCCCCh--HHHHHHHHHc-CCCcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCc
Q 011969 315 YPRLLFIITGKGPDK--ESYEEKIRRL-RLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLP 391 (474)
Q Consensus 315 ~~~~~l~ivG~g~~~--~~~~~~~~~l-~l~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~P 391 (474)
.|+..++|-=...+. ... +...++ ..+++.+... .-++..++..||.++.. ++. +-+||+.+|+|
T Consensus 153 ~p~~~lvvK~HP~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~Ll~~s~~Vvti---nSt-----vGlEAll~gkp 220 (269)
T PF05159_consen 153 NPDAKLVVKPHPDERGGNKY-SYLEELPNLPNVVIIDD---DVNLYELLEQSDAVVTI---NST-----VGLEALLHGKP 220 (269)
T ss_pred CCCCEEEEEECchhhCCCCh-hHhhhhhcCCCeEEECC---CCCHHHHHHhCCEEEEE---CCH-----HHHHHHHcCCc
Confidence 568888766543111 111 222222 3456666643 67899999999999982 333 55999999999
Q ss_pred EEEec
Q 011969 392 VCAVS 396 (474)
Q Consensus 392 Via~~ 396 (474)
|++-.
T Consensus 221 Vi~~G 225 (269)
T PF05159_consen 221 VIVFG 225 (269)
T ss_pred eEEec
Confidence 99964
|
Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport |
| >PRK14985 maltodextrin phosphorylase; Provisional | Back alignment and domain information |
|---|
Probab=90.75 E-value=1.1 Score=51.07 Aligned_cols=144 Identities=15% Similarity=0.168 Sum_probs=98.1
Q ss_pred cCCCCCeEEEEEeecccCCCHHH-HHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCCh---
Q 011969 254 LKPNRPALVVSSTSWTPDEDFGI-LLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK--- 329 (474)
Q Consensus 254 ~~~~~~~~i~~~G~l~~~k~~~~-Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~--- 329 (474)
+.++. ++.+++-|++..|...+ ++..+..+.+ |.+++........+++.|+-...
T Consensus 525 ldp~s-lfdvq~kR~heYKRq~Lnil~ii~~y~~--------------------i~~~p~~~~~P~~~IFaGKAaP~y~~ 583 (798)
T PRK14985 525 INPQA-IFDVQIKRLHEYKRQHLNLLHILALYKE--------------------IRENPQADRVPRVFLFGAKAAPGYYL 583 (798)
T ss_pred cCchh-cchhhHhhhhhhhhhhhHhhhhHHHHHH--------------------HHhCCCcCCCCeEEEEeecCCCCcHH
Confidence 34443 37788999999999888 7777766654 22232222234788888864221
Q ss_pred -HHHHHHHHHcC--------C-C--cEEEecCCCCcccHHHHHhcccEEEeeccCC-CCCCCchHHHHHHhcCCcEEEec
Q 011969 330 -ESYEEKIRRLR--------L-K--RVAFRTMWLSAEDYPLLLGSADLGVCLHTSS-SGLDLPMKVVDMFGCGLPVCAVS 396 (474)
Q Consensus 330 -~~~~~~~~~l~--------l-~--~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s-~~e~~p~kv~Eama~G~PVia~~ 396 (474)
..+-+.+.... + + +|.|+.- .+.+-...++..||+...- |. .-|..|..=+=+|..|.+-++|-
T Consensus 584 aK~iIklI~~va~~in~Dp~v~~~lkVVFlen-Y~VslAe~lipaaDvseqi--s~ag~EASGTsnMK~amNGaLtlgtl 660 (798)
T PRK14985 584 AKNIIFAINKVAEVINNDPLVGDKLKVVFLPD-YCVSAAELLIPAADISEQI--STAGKEASGTGNMKLALNGALTVGTL 660 (798)
T ss_pred HHHHHHHHHHHHHHhcCChhhCCceeEEEeCC-CChHHHHHHhhhhhhhhhC--CCCCccccCcchhHHHhcCceeeecc
Confidence 22222222221 1 2 6999876 7778888999999999982 33 33777777788999999999998
Q ss_pred cccccccccc--CCcEEEeC-CHHHHHH
Q 011969 397 YSCIEELVKV--DKNGLLFS-SSSELAD 421 (474)
Q Consensus 397 ~~~~~e~v~~--~~~G~l~~-~~~~la~ 421 (474)
-|...|+.+. ++||+++. +.+++.+
T Consensus 661 DGanvEi~e~vG~eN~f~fG~~~~ev~~ 688 (798)
T PRK14985 661 DGANVEIAEQVGEENIFIFGHTVEQVKA 688 (798)
T ss_pred cchHHHHHHHhCcCcEEEeCCCHHHHHH
Confidence 8888888765 78999996 4554443
|
|
| >COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=90.56 E-value=25 Score=36.98 Aligned_cols=79 Identities=16% Similarity=0.161 Sum_probs=52.2
Q ss_pred CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEeccccccccccc--CCcEEEeC----C
Q 011969 342 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKV--DKNGLLFS----S 415 (474)
Q Consensus 342 ~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~~~~e~v~~--~~~G~l~~----~ 415 (474)
.++.+... -..+++-..++++|+.|- ...+ .++=|++.|+|+|+..+..-.+-+-+ +-.|+..+ +
T Consensus 266 ~~i~~~~d-~~~~~~~~~l~~~dl~Vg---~R~H-----saI~al~~g~p~i~i~Y~~K~~~l~~~~gl~~~~~~i~~~~ 336 (385)
T COG2327 266 AEILVSSD-EYAEELGGILAACDLIVG---MRLH-----SAIMALAFGVPAIAIAYDPKVRGLMQDLGLPGFAIDIDPLD 336 (385)
T ss_pred cceEeecc-hHHHHHHHHhccCceEEe---ehhH-----HHHHHHhcCCCeEEEeecHHHHHHHHHcCCCcccccCCCCc
Confidence 57777743 113677889999999996 3334 78999999999999876432222211 22344443 4
Q ss_pred HHHHHHHHHHHHhC
Q 011969 416 SSELADQLLMLFKG 429 (474)
Q Consensus 416 ~~~la~~i~~l~~~ 429 (474)
.+.+.+...+.+.+
T Consensus 337 ~~~l~~~~~e~~~~ 350 (385)
T COG2327 337 AEILSAVVLERLTK 350 (385)
T ss_pred hHHHHHHHHHHHhc
Confidence 77777777777665
|
|
| >PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [] | Back alignment and domain information |
|---|
Probab=90.17 E-value=3.5 Score=38.34 Aligned_cols=67 Identities=24% Similarity=0.311 Sum_probs=37.5
Q ss_pred CCCCEEEEeCCCC-hhHHHHHHHHHhh--CCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhhhcCEEEEeCHH
Q 011969 100 ASPDVFLVQNPPS-VPTLVAVKWASSL--RRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQA 176 (474)
Q Consensus 100 ~~~Dvi~~~~~~~-~~~~~~~~~~~~~--~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~ 176 (474)
.+||+|++++|.. +|..+++++.+.+ .+.++|+ +-.+. .....+.- -|.+++.||.+++.-++
T Consensus 91 ~rPdvii~nGpg~~vp~~~~~~l~~~~~~~~~kiIy-IES~a------Rv~~lSlT-------Gklly~~aD~f~VQW~~ 156 (170)
T PF08660_consen 91 ERPDVIISNGPGTCVPVCLAAKLLRLLGLRGSKIIY-IESFA------RVKTLSLT-------GKLLYPFADRFIVQWEE 156 (170)
T ss_pred hCCCEEEEcCCceeeHHHHHHHHHHHhhccCCcEEE-EEeee------ecCCCchH-------HHHHHHhCCEEEEcCHH
Confidence 7899999998743 3444334433322 2777766 22221 01112211 23445579999999997
Q ss_pred HHHH
Q 011969 177 MQHE 180 (474)
Q Consensus 177 ~~~~ 180 (474)
+++.
T Consensus 157 l~~~ 160 (170)
T PF08660_consen 157 LAEK 160 (170)
T ss_pred HHhH
Confidence 7754
|
|
| >PLN02992 coniferyl-alcohol glucosyltransferase | Back alignment and domain information |
|---|
Probab=89.88 E-value=2.9 Score=45.37 Aligned_cols=78 Identities=13% Similarity=0.121 Sum_probs=53.8
Q ss_pred cEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecc----ccccccc-ccCCcEEEeC---
Q 011969 343 RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY----SCIEELV-KVDKNGLLFS--- 414 (474)
Q Consensus 343 ~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~----~~~~e~v-~~~~~G~l~~--- 414 (474)
++.+. .|+|+.+ ++.+..+..+. +++. -+++.||+.+|+|+|+... ......+ +.-+.|+..+
T Consensus 339 g~vv~-~W~PQ~~---iL~h~~vg~Fi---tH~G--~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~ 409 (481)
T PLN02992 339 GFVVP-SWAPQAE---ILAHQAVGGFL---THCG--WSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSDDPK 409 (481)
T ss_pred CEEEe-ecCCHHH---HhCCcccCeeE---ecCc--hhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEecCCC
Confidence 46665 4688765 67788876652 3331 2489999999999999863 3333444 3556676662
Q ss_pred ---CHHHHHHHHHHHHhC
Q 011969 415 ---SSSELADQLLMLFKG 429 (474)
Q Consensus 415 ---~~~~la~~i~~l~~~ 429 (474)
+.+++++++.+++.+
T Consensus 410 ~~~~~~~l~~av~~vm~~ 427 (481)
T PLN02992 410 EVISRSKIEALVRKVMVE 427 (481)
T ss_pred CcccHHHHHHHHHHHhcC
Confidence 578999999999974
|
|
| >KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion] | Back alignment and domain information |
|---|
Probab=89.77 E-value=5 Score=42.94 Aligned_cols=106 Identities=18% Similarity=0.287 Sum_probs=59.9
Q ss_pred CCEEEEEEeCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEe
Q 011969 316 PRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV 395 (474)
Q Consensus 316 ~~~~l~ivG~g~~~~~~~~~~~~l~l~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~ 395 (474)
+++.|++.=.+.....+.+.....+..+|.+. .|+|+.++. +.+..+..+. +++ |++ .++|+..+|+|+|+.
T Consensus 309 ~~~~FiW~~~~~~~~~~~~~~~~~~~~nV~~~-~W~PQ~~ll--l~H~~v~~Fv---THg-G~n-St~E~~~~GvP~v~~ 380 (496)
T KOG1192|consen 309 QGVTFLWKYRPDDSIYFPEGLPNRGRGNVVLS-KWAPQNDLL--LDHPAVGGFV---THG-GWN-STLESIYSGVPMVCV 380 (496)
T ss_pred CCceEEEEecCCcchhhhhcCCCCCcCceEEe-cCCCcHHHh--cCCCcCcEEE---ECC-ccc-HHHHHHhcCCceecC
Confidence 56666666544332221111111112367776 579998877 5555455552 333 233 669999999999976
Q ss_pred c----cc-ccccccccCCcEEEeC---CHHHHHHHHHHHHhC
Q 011969 396 S----YS-CIEELVKVDKNGLLFS---SSSELADQLLMLFKG 429 (474)
Q Consensus 396 ~----~~-~~~e~v~~~~~G~l~~---~~~~la~~i~~l~~~ 429 (474)
. .. ....+.+++..|++.. +..++.+++..++.+
T Consensus 381 Plf~DQ~~Na~~i~~~g~~~v~~~~~~~~~~~~~~~~~il~~ 422 (496)
T KOG1192|consen 381 PLFGDQPLNARLLVRHGGGGVLDKRDLVSEELLEAIKEILEN 422 (496)
T ss_pred CccccchhHHHHHHhCCCEEEEehhhcCcHHHHHHHHHHHcC
Confidence 4 22 2334444555555553 233488888888774
|
|
| >PF10093 DUF2331: Uncharacterized protein conserved in bacteria (DUF2331); InterPro: IPR016633 This entry describes a conserved hypothetical protein that typically is encoded next to the gene efp for translation elongation factor P | Back alignment and domain information |
|---|
Probab=89.17 E-value=32 Score=36.11 Aligned_cols=47 Identities=23% Similarity=0.323 Sum_probs=41.0
Q ss_pred cEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEeccc
Q 011969 343 RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS 398 (474)
Q Consensus 343 ~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~ 398 (474)
.+.++++ +|++++..++..||+-++ +||+ +++=|.-+|+|.|=.-++
T Consensus 245 ~l~~lPF-~~Q~~yD~LLw~cD~NfV-----RGED---SfVRAqwAgkPFvWhIYp 291 (374)
T PF10093_consen 245 TLHVLPF-VPQDDYDRLLWACDFNFV-----RGED---SFVRAQWAGKPFVWHIYP 291 (374)
T ss_pred EEEECCC-CCHHHHHHHHHhCccceE-----ecch---HHHHHHHhCCCceEecCc
Confidence 6888888 999999999999999998 6764 589999999999976554
|
The function is unknown. |
| >PF08288 PIGA: PIGA (GPI anchor biosynthesis); InterPro: IPR013234 This domain is found on phosphatidylinositol N-acetylglucosaminyltransferase proteins | Back alignment and domain information |
|---|
Probab=86.46 E-value=2.8 Score=34.68 Aligned_cols=73 Identities=8% Similarity=-0.065 Sum_probs=43.0
Q ss_pred cCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcCCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEE
Q 011969 53 HPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIV 132 (474)
Q Consensus 53 ~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~ 132 (474)
.+|++++.+|..+ ......++..+.. +.++..++.+ ++.|+||.|...+.... =+.+.++..|.+.|+
T Consensus 13 tngLKVYYlP~~~--~~~~~t~Pt~~~~--------~pl~R~Ilir-E~I~IVHgH~a~S~l~h-E~i~hA~~mGlktVf 80 (90)
T PF08288_consen 13 TNGLKVYYLPLKV--FYNQCTLPTLFGS--------FPLLRNILIR-ERIDIVHGHQAFSTLCH-EAILHARTMGLKTVF 80 (90)
T ss_pred CCCeEEEeecchh--hhcCcchHHHHHh--------hHHHHHHHHH-cCeeEEEeehhhhHHHH-HHHHHHHhCCCcEEe
Confidence 4589999998332 2222222222211 1222222223 89999999985332222 255677788999999
Q ss_pred EecCc
Q 011969 133 DWHNF 137 (474)
Q Consensus 133 ~~h~~ 137 (474)
+=|+.
T Consensus 81 TDHSL 85 (90)
T PF08288_consen 81 TDHSL 85 (90)
T ss_pred ecccc
Confidence 99986
|
These proteins are involved in GPI anchor biosynthesis and are associated with the disease paroxysmal nocturnal haemoglobinuria [].; GO: 0006506 GPI anchor biosynthetic process |
| >PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [] | Back alignment and domain information |
|---|
Probab=81.55 E-value=10 Score=34.75 Aligned_cols=69 Identities=16% Similarity=0.269 Sum_probs=42.6
Q ss_pred cCCCCEEEEeCCCChhHHH-HHHHHHh--hCCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhhhcCEEEEeCH
Q 011969 99 IASPDVFLVQNPPSVPTLV-AVKWASS--LRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQ 175 (474)
Q Consensus 99 ~~~~Dvi~~~~~~~~~~~~-~~~~~~~--~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~ 175 (474)
..+||+|+++.| +++.+ +..+.++ +.++|++.-+=|+. .-... ++...+|..++.|+
T Consensus 87 ~~~PD~IIsThp--~~~~~~l~~lk~~~~~~~~p~~tvvTD~~-------~~H~~-----------W~~~~~D~y~Vase 146 (169)
T PF06925_consen 87 EFQPDLIISTHP--FPAQVPLSRLKRRGRLPNIPVVTVVTDFD-------TVHPF-----------WIHPGVDRYFVASE 146 (169)
T ss_pred hcCCCEEEECCc--chhhhHHHHHHHhhcccCCcEEEEEcCCC-------CCCcC-----------eecCCCCEEEECCH
Confidence 389999999987 33443 3333222 22567654444441 00111 12357999999999
Q ss_pred HHHHHHHHHhCCc
Q 011969 176 AMQHELAQNWGIK 188 (474)
Q Consensus 176 ~~~~~l~~~~~~~ 188 (474)
.+++.+.+ .|++
T Consensus 147 ~~~~~l~~-~Gi~ 158 (169)
T PF06925_consen 147 EVKEELIE-RGIP 158 (169)
T ss_pred HHHHHHHH-cCCC
Confidence 99999988 4776
|
; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Length = 394 | Back alignment and structure |
|---|
Score = 54.6 bits (132), Expect = 3e-08
Identities = 61/449 (13%), Positives = 136/449 (30%), Gaps = 138/449 (30%)
Query: 24 QALSLARQMS---LEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLL 80
L +Q++ E+ + G P +P+I+ H + + + L
Sbjct: 32 VGTELGKQLAERGHEIHFITSGL--PFRLNKVYPNIYFH---EVTVNQYSVFQYPPYDLA 86
Query: 81 LLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSA--FIVDWHNFG 138
L + + + + D+ V +P + A + + H
Sbjct: 87 LASKMAEV--------AQRENLDILHVHYA--IPHAICAYLAKQMIGERIKIVTTLHGTD 136
Query: 139 YTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQNWGI--KATVLY--- 193
T+L + ++ + ++ V+ ++ +E + +Y
Sbjct: 137 ITVLGSD--------PSLNNLIRFGIEQSDVVTAVSHSLINETHELVKPNKDIQTVYNFI 188
Query: 194 DQPPEFFHPTSLEE-KHELFCRLNK--ILHQPLGVQDCVSNAGMEGQKADETIFTSLAGI 250
D + + + K E ++ ++H +SN K +
Sbjct: 189 D--ERVYFKRDMTQLKKEYGISESEKILIH--------ISN--FRKVK----------RV 226
Query: 251 DVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDG 310
+++A A I+ E D+
Sbjct: 227 QD------------------------VVQAF-------AKIVTEVDAK------------ 243
Query: 311 KQYLYPRLLFIITGKGPDKESYEEKIRRLRL-KRVAF---RTMWLSAEDYPLLLGSADLG 366
++ G GP+ + + ++ L + RV F + ++ LL +D
Sbjct: 244 ---------LLLVGDGPEFCTILQLVKNLHIEDRVLFLGKQ------DNVAELLAMSD-- 286
Query: 367 VCLHTSSS-GLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF--SSSSELADQL 423
+ L S + +++ CG+P I E+++ G L ++ +ADQ
Sbjct: 287 LMLLLSEKES--FGLVLLEAMACGVPCIGTRVGGIPEVIQHGDTGYLCEVGDTTGVADQA 344
Query: 424 LMLFKGFPDDSDVLKKLRNGTLEMGLSAR 452
+ L K D ++ + MG AR
Sbjct: 345 IQLLK----DEELHRN-------MGERAR 362
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} Length = 166 | Back alignment and structure |
|---|
Score = 51.8 bits (125), Expect = 4e-08
Identities = 15/155 (9%), Positives = 51/155 (32%), Gaps = 26/155 (16%)
Query: 315 YPRLLFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSS 373
++ ++ GKGPD++ + ++L + F +++ + +L + + +H ++
Sbjct: 30 KQDIVLLLKGKGPDEKKIKLLAQKLGVKAEFGF----VNSNELLEILKTCT--LYVHAAN 83
Query: 374 S-GLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFS--SSSELADQLLMLFKGF 430
+ ++ G+ + LF ++ +L+ ++
Sbjct: 84 VES--EAIACLEAISVGIVPVIANSPLSATRQFALDERSLFEPNNAKDLSAKIDWWL--- 138
Query: 431 PDDSDVLKKLRNGTLEMGLSARWATE---WEEHAK 462
++ ++ M + E
Sbjct: 139 -ENKLERER-------MQNEYAKSALNYTLENSVI 165
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Length = 413 | Back alignment and structure |
|---|
Score = 49.4 bits (117), Expect = 1e-06
Identities = 25/146 (17%), Positives = 42/146 (28%), Gaps = 17/146 (11%)
Query: 315 YPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS 374
I G+ L L+ EDY LL + +G+ L S
Sbjct: 274 SNEWKIISVGEKHKDI-------ALGKGIHLNSLGKLTLEDYADLLKRSSIGISL-MISP 325
Query: 375 GLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSS--ELADQLLMLFKGFPD 432
P ++M GL V Y +L N + + +A+ L+ L
Sbjct: 326 HPSYP--PLEMAHFGLRVITNKYENK-DLSNWHSNIVSLEQLNPENIAETLVELC----M 378
Query: 433 DSDVLKKLRNGTLEMGLSARWATEWE 458
+ + + M E+
Sbjct: 379 SFNNRDVDKKESSNMMFYINEFNEFS 404
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Length = 394 | Back alignment and structure |
|---|
Score = 48.5 bits (116), Expect = 3e-06
Identities = 35/160 (21%), Positives = 56/160 (35%), Gaps = 28/160 (17%)
Query: 315 YPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCL-HTSS 373
P +I G G + + + + V F L +D L +AD+ T
Sbjct: 227 RPDAQLLIVGSGRYESTLRRLATDVS-QNVKF-LGRLEYQDMINTLAAADIFAMPARTRG 284
Query: 374 SGLD---LPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF--SSSSELADQLLMLFK 428
GLD L + ++ CG+PV A + E V GL+ S +L++ L+ L
Sbjct: 285 GGLDVEGLGIVYLEAQACGVPVIAGTSGGAPETV-TPATGLVVEGSDVDKLSELLIEL-- 341
Query: 429 GFPDDSDVLKKLRNGTL--EMGLSAR-WATE---WEEHAK 462
L + MG + R WE +
Sbjct: 342 -----------LDDPIRRAAMGAAGRAHVEAEWSWEIMGE 370
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 49.1 bits (116), Expect = 3e-06
Identities = 60/383 (15%), Positives = 114/383 (29%), Gaps = 94/383 (24%)
Query: 101 SPDVFLVQNPPSVPTLVAVK-WASSLRRSAFIVDWHN---FGYTLLSLSLGRRSHFVS-- 154
VF N + + ++ LR + ++ G T ++L +
Sbjct: 122 DNQVFAKYNVSRLQPYLKLRQALLELRPAKNVL-IDGVLGSGKTWVALDVCLSYKVQCKM 180
Query: 155 ---IYRWIEKYYGKMANGCLCVTQAMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHEL 211
I+ W+ L + Q + +++ NW T D H +
Sbjct: 181 DFKIF-WLNLKNCNSPETVLEMLQKLLYQIDPNW----TSRSDHSSNIKLRI-----HSI 230
Query: 212 FCRLNKILHQP-----LGVQDCVSNAGMEGQKA------------DETIFTSLAGIDVFL 254
L ++L L V V NA + A + + L+
Sbjct: 231 QAELRRLLKSKPYENCLLVLLNVQNA--KAWNAFNLSCKILLTTRFKQVTDFLSA----A 284
Query: 255 KPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNE---EVFLKEISDG- 310
+L S + TPDE +LL+ R + E +TN + + I DG
Sbjct: 285 TTTHISLDHHSMTLTPDEVKSLLLKYLDC---RPQDLPREVLTTNPRRLSIIAESIRDGL 341
Query: 311 ------KQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSAD 364
K +L II + S L+ +R M+
Sbjct: 342 ATWDNWKHVNCDKLTTII------ESSLNV------LEPAEYRKMFD------------R 377
Query: 365 LGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELV-KVDKNGLL----FSSSSEL 419
L V +P ++ + + S + +V K+ K L+ S+ +
Sbjct: 378 LSVF----PPSAHIPTILLSLIWFDVI-----KSDVMVVVNKLHKYSLVEKQPKESTISI 428
Query: 420 ADQLLMLFKGFPDDSDVLKKLRN 442
L L ++ + + + +
Sbjct: 429 PSIYLELKVKLENEYALHRSIVD 451
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 42.9 bits (100), Expect = 2e-04
Identities = 33/269 (12%), Positives = 74/269 (27%), Gaps = 75/269 (27%)
Query: 257 NRPALVVSSTSWTPDEDFGILLEA--ALMYDRRVAAILNEDDSTNE-------------- 300
+ L V ++ + D + + +++ + I+ D+ +
Sbjct: 18 YKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEE 77
Query: 301 --EVFLKEISDGKQY--LYPRLLFIITGKGPDKESYEEKIRRL-------------RLKR 343
+ F++E+ Y L + Y E+ RL RL+
Sbjct: 78 MVQKFVEEVLR-INYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQP 136
Query: 344 V-AFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEE 402
R L V + G + G G A+ C+
Sbjct: 137 YLKLRQALLELRPAK--------NVLID----G---------VLGSGKTWVALD-VCLSY 174
Query: 403 LVKVDKNGLLF-------SSSSELADQLLMLF----KGFPDDSDVLKKLRNGTLEMGLSA 451
V+ + +F +S + + L L + SD ++ +
Sbjct: 175 KVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAEL 234
Query: 452 RWATEWEEHAKPLI-------TEVISQFD 473
R + + + L+ + + F+
Sbjct: 235 RRLLKSKPYENCLLVLLNVQNAKAWNAFN 263
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Length = 416 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 1e-05
Identities = 29/163 (17%), Positives = 58/163 (35%), Gaps = 32/163 (19%)
Query: 315 YPRLLFIITGKGPD-----KESYEEKIRRLRLKR-VAFRTMWL--SAEDYPLLLGSADLG 366
P + ++ G +E+ +R++ V T + A + ++D
Sbjct: 260 IPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAREVNAFQRASD-- 317
Query: 367 VCLHTSSS-GLDLPMKVVDMFGCGLPVCAVSYSC--IEELVKVDKNGLLFSSSSELADQL 423
V L S G + V + G PV + + I+ + + G L ++E + +
Sbjct: 318 VILQMSIREGF--GLTVTEAMWKGKPV--IGRAVGGIKFQIVDGETGFLVRDANEAVEVV 373
Query: 424 LMLFKGFPDDSDVLKKLRNGTLEMGLSAR-WATE---WEEHAK 462
L L K +V K+ MG A+ + +H +
Sbjct: 374 LYLLK----HPEVSKE-------MGAKAKERVRKNFIITKHME 405
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 Length = 177 | Back alignment and structure |
|---|
Score = 43.3 bits (103), Expect = 4e-05
Identities = 28/136 (20%), Positives = 44/136 (32%), Gaps = 28/136 (20%)
Query: 316 PRLLFIITGKGPDKESYEEKIRRLR---LKRVAFRTMWLSAEDYPLLLGSADLGVCLHTS 372
I G + E R++ V F +S E+ L L T+
Sbjct: 49 QDEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLG-SVSEEELIDLYSRCK--GLLCTA 105
Query: 373 SSGLDLPMKVVDMFG--------CGLPVCAVSYSCIEELVKVDKNGLLFSSSSE-LADQL 423
+ FG G PV AV+ +E V +K G L ++ + D +
Sbjct: 106 KD---------EDFGLTPIEAMASGKPVIAVNEGGFKETVINEKTGYLVNADVNEIIDAM 156
Query: 424 LMLFKGFPDDSDVLKK 439
+ K + D KK
Sbjct: 157 KKVSK----NPDKFKK 168
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Length = 374 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 5e-05
Identities = 23/167 (13%), Positives = 44/167 (26%), Gaps = 31/167 (18%)
Query: 315 YPRLLFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSS 373
+ +E +L + V F + D L+ +AD + LH +
Sbjct: 225 LRHNTLLFVVGQDKPRKFEALAEKLGVRSNVHF---FSGRNDVSELMAAAD--LLLHPAY 279
Query: 374 SGLDLPMKVVDMFG--------CGLPVCAVSYSCIEELVKVDKNGLLFSS---SSELADQ 422
+ G GLPV + + G + + +L +
Sbjct: 280 Q---------EAAGIVLLEAITAGLPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEV 330
Query: 423 LLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEVI 469
L S + + + E A +IT +
Sbjct: 331 LRKAL----TQSPLRMAWAENARHYADTQDLYS-LPEKAADIITGGL 372
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* Length = 342 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 1e-04
Identities = 19/109 (17%), Positives = 36/109 (33%), Gaps = 9/109 (8%)
Query: 320 FIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLP 379
++ G + E ++E RR V + E LL SA + + + +G
Sbjct: 191 LVLAGPAWEPEYFDEITRRYG-STVEPIGE-VGGERRLDLLASAHAVLAMSQAVTGPWGG 248
Query: 380 -------MKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELAD 421
V + G PV C+ E+V + + + +
Sbjct: 249 IWCEPGATVVSEAAVSGTPVVGTGNGCLAEIVPSVGEVVGYGTDFAPDE 297
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 474 | |||
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 100.0 | |
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 100.0 | |
| 3fro_A | 439 | GLGA glycogen synthase; glycosyltransferase family | 100.0 | |
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 100.0 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 100.0 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 100.0 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 100.0 | |
| 2qzs_A | 485 | Glycogen synthase; glycosyl-transferase, GT-B fold | 100.0 | |
| 1rzu_A | 485 | Glycogen synthase 1; glycosyl-transferase, GT-B fo | 100.0 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 100.0 | |
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 100.0 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 100.0 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 100.0 | |
| 3vue_A | 536 | GBSS-I, granule-bound starch synthase 1, chloropla | 99.97 | |
| 1f0k_A | 364 | MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe | 99.96 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 99.96 | |
| 3beo_A | 375 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a | 99.95 | |
| 2hy7_A | 406 | Glucuronosyltransferase GUMK; glycosyltransferases | 99.94 | |
| 1vgv_A | 384 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.94 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.93 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 99.93 | |
| 2bfw_A | 200 | GLGA glycogen synthase; glycosyltransferase family | 99.92 | |
| 3rhz_A | 339 | GTF3, nucleotide sugar synthetase-like protein; gl | 99.92 | |
| 3nb0_A | 725 | Glycogen [starch] synthase isoform 2; glycogen syn | 99.92 | |
| 1v4v_A | 376 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t | 99.9 | |
| 1uqt_A | 482 | Alpha, alpha-trehalose-phosphate synthase; glycosy | 99.89 | |
| 2f9f_A | 177 | First mannosyl transferase (WBAZ-1); alpha-beta pr | 99.89 | |
| 2xci_A | 374 | KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci | 99.89 | |
| 3t5t_A | 496 | Putative glycosyltransferase; GTB fold, pseudoglyc | 99.83 | |
| 3s2u_A | 365 | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape | 99.83 | |
| 3otg_A | 412 | CALG1; calicheamicin, TDP, structural genomics, PS | 99.82 | |
| 3dzc_A | 396 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.81 | |
| 3ot5_A | 403 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.78 | |
| 2iyf_A | 430 | OLED, oleandomycin glycosyltransferase; antibiotic | 99.77 | |
| 4fzr_A | 398 | SSFS6; structural genomics, PSI-biology, protein s | 99.72 | |
| 3ia7_A | 402 | CALG4; glycosysltransferase, calicheamicin, enediy | 99.7 | |
| 3tsa_A | 391 | SPNG, NDP-rhamnosyltransferase; glycosyltransferas | 99.68 | |
| 3oti_A | 398 | CALG3; calicheamicin, TDP, structural genomics, PS | 99.66 | |
| 3rsc_A | 415 | CALG2; TDP, enediyne, structural genomics, PSI-2, | 99.65 | |
| 2p6p_A | 384 | Glycosyl transferase; X-RAY-diffraction,urdamycina | 99.55 | |
| 4hwg_A | 385 | UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc | 99.47 | |
| 2iya_A | 424 | OLEI, oleandomycin glycosyltransferase; carbohydra | 99.46 | |
| 2yjn_A | 441 | ERYCIII, glycosyltransferase; transferase, cytochr | 99.34 | |
| 3h4t_A | 404 | Glycosyltransferase GTFA, glycosyltransferase; van | 99.25 | |
| 3q3e_A | 631 | HMW1C-like glycosyltransferase; N-glycosylation; 2 | 99.24 | |
| 1iir_A | 415 | Glycosyltransferase GTFB; rossmann fold; 1.80A {Am | 99.23 | |
| 4amg_A | 400 | Snogd; transferase, polyketide biosynthesis, GT1 f | 99.11 | |
| 1rrv_A | 416 | Glycosyltransferase GTFD; GT-B, glycosyltransferas | 99.07 | |
| 2o6l_A | 170 | UDP-glucuronosyltransferase 2B7; drug metabolism, | 99.04 | |
| 3hbf_A | 454 | Flavonoid 3-O-glucosyltransferase; glycosyltransfe | 98.56 | |
| 1l5w_A | 796 | Maltodextrin phosphorylase; enzymatic catalysis, s | 98.52 | |
| 2c1x_A | 456 | UDP-glucose flavonoid 3-O glycosyltransferase; WIN | 98.47 | |
| 2pq6_A | 482 | UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl | 98.44 | |
| 2c4m_A | 796 | Glycogen phosphorylase; allosteric control, phosph | 98.39 | |
| 2vch_A | 480 | Hydroquinone glucosyltransferase; glycosyltransfer | 98.34 | |
| 2acv_A | 463 | Triterpene UDP-glucosyl transferase UGT71G1; glyco | 98.27 | |
| 1psw_A | 348 | ADP-heptose LPS heptosyltransferase II; structural | 98.01 | |
| 3tov_A | 349 | Glycosyl transferase family 9; structural genomics | 97.98 | |
| 2gj4_A | 824 | Glycogen phosphorylase, muscle form; transferase; | 97.85 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 97.83 | |
| 3l7i_A | 729 | Teichoic acid biosynthesis protein F; GT-B fold, m | 97.62 | |
| 3hbm_A | 282 | UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter je | 96.87 | |
| 2jzc_A | 224 | UDP-N-acetylglucosamine transferase subunit ALG13; | 96.54 | |
| 2gt1_A | 326 | Lipopolysaccharide heptosyltransferase-1; GT-B fol | 94.43 | |
| 1ygp_A | 879 | Yeast glycogen phosphorylase; phosphorylated form, | 90.89 |
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-37 Score=321.68 Aligned_cols=382 Identities=17% Similarity=0.176 Sum_probs=268.3
Q ss_pred CCceEEEEEeC----------CCCCCch-HHHHHHHHHhhCCCeEEEEecCCCCCCcc-eeccCCeEEEEeecCCCCCCC
Q 011969 3 RRGRACVVVLG----------DLGRSPR-MQYQALSLARQMSLEVDVVAYGGSKPHAA-ILEHPSIHIHTMTQWPTIPRG 70 (474)
Q Consensus 3 ~~~~~~i~~~~----------~~g~~~r-~~~~a~~l~~~~g~eV~Vv~~~~~~~~~~-~~~~~gi~i~~~~~~~~~~~~ 70 (474)
++++|+++... +.||..+ +...+..|.++ ||+|+|++......... ....+++++++++..+.....
T Consensus 19 ~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~-G~~V~v~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~ 97 (438)
T 3c48_A 19 SHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQ-GIEVDIYTRATRPSQGEIVRVAENLRVINIAAGPYEGLS 97 (438)
T ss_dssp CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHT-TCEEEEEEECCCGGGCSEEEEETTEEEEEECCSCSSSCC
T ss_pred chheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhc-CCEEEEEecCCCCCCcccccccCCeEEEEecCCCccccc
Confidence 44567766642 2355544 45567788886 99999999775422111 223469999998832211111
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHhhhcCCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCc
Q 011969 71 LPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRS 150 (474)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~ 150 (474)
...+...+..+.+.+. ...+.+..+||+||++. .....++.++++..++|+|+++|+....... ......
T Consensus 98 ~~~~~~~~~~~~~~~~------~~~~~~~~~~Div~~~~---~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~-~~~~~~ 167 (438)
T 3c48_A 98 KEELPTQLAAFTGGML------SFTRREKVTYDLIHSHY---WLSGQVGWLLRDLWRIPLIHTAHTLAAVKNS-YRDDSD 167 (438)
T ss_dssp GGGGGGGHHHHHHHHH------HHHHHHTCCCSEEEEEH---HHHHHHHHHHHHHHTCCEEEECSSCHHHHSC-C----C
T ss_pred hhHHHHHHHHHHHHHH------HHHHhccCCCCEEEeCC---ccHHHHHHHHHHHcCCCEEEEecCCcccccc-cccccC
Confidence 1112221211111111 11122223599999997 3334445566667789999999998532110 111111
Q ss_pred hH-HHHHHHHHHHHhhhcCEEEEeCHHHHHHHHHHhCCc---eEEEeCCCC-CCCCCCChHHHHHHHHhhhhccCCCCCc
Q 011969 151 HF-VSIYRWIEKYYGKMANGCLCVTQAMQHELAQNWGIK---ATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGV 225 (474)
Q Consensus 151 ~~-~~~~~~~e~~~~~~ad~vi~vS~~~~~~l~~~~~~~---~~vi~n~~~-~~f~~~~~~~~~~~~~~l~~~~~~~~~~ 225 (474)
.. .....++++.+.+.+|.++++|+.+++.+.+.+|.+ +.+++|+.+ +.|.+........++++++
T Consensus 168 ~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~g~~~~k~~vi~ngvd~~~~~~~~~~~~~~~r~~~~--------- 238 (438)
T 3c48_A 168 TPESEARRICEQQLVDNADVLAVNTQEEMQDLMHHYDADPDRISVVSPGADVELYSPGNDRATERSRRELG--------- 238 (438)
T ss_dssp CHHHHHHHHHHHHHHHHCSEEEESSHHHHHHHHHHHCCCGGGEEECCCCCCTTTSCCC----CHHHHHHTT---------
T ss_pred CcchHHHHHHHHHHHhcCCEEEEcCHHHHHHHHHHhCCChhheEEecCCccccccCCcccchhhhhHHhcC---------
Confidence 11 233456788889999999999999999998877753 899999954 5666553333334555655
Q ss_pred cccccccccCCcCcchhhhhcccccccccCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHh
Q 011969 226 QDCVSNAGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLK 305 (474)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~ 305 (474)
++++. .+++|+|++.+.||++.+++|+..+.++
T Consensus 239 ----------------------------~~~~~-~~i~~~G~~~~~Kg~~~li~a~~~l~~~------------------ 271 (438)
T 3c48_A 239 ----------------------------IPLHT-KVVAFVGRLQPFKGPQVLIKAVAALFDR------------------ 271 (438)
T ss_dssp ----------------------------CCSSS-EEEEEESCBSGGGCHHHHHHHHHHHHHH------------------
T ss_pred ----------------------------CCCCC-cEEEEEeeecccCCHHHHHHHHHHHHhh------------------
Confidence 22333 3899999999999999999999998774
Q ss_pred hhcCCccccCC--CEEEEEEeC----CCChHHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCC
Q 011969 306 EISDGKQYLYP--RLLFIITGK----GPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDL 378 (474)
Q Consensus 306 ~~~~~~~~~~~--~~~l~ivG~----g~~~~~~~~~~~~l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~ 378 (474)
.| +++|+|+|+ |+..+.+++.++++++ ++|.|+|. ++.+++..+|+.||++|+ +|..|++
T Consensus 272 ---------~p~~~~~l~i~G~~~~~g~~~~~l~~~~~~~~l~~~v~~~g~-~~~~~~~~~~~~adv~v~---ps~~e~~ 338 (438)
T 3c48_A 272 ---------DPDRNLRVIICGGPSGPNATPDTYRHMAEELGVEKRIRFLDP-RPPSELVAVYRAADIVAV---PSFNESF 338 (438)
T ss_dssp ---------CTTCSEEEEEECCBC------CHHHHHHHHTTCTTTEEEECC-CCHHHHHHHHHHCSEEEE---CCSCCSS
T ss_pred ---------CCCcceEEEEEeCCCCCCcHHHHHHHHHHHcCCCCcEEEcCC-CChHHHHHHHHhCCEEEE---CccccCC
Confidence 45 899999998 8888899999999998 79999998 999999999999999999 6788999
Q ss_pred chHHHHHHhcCCcEEEecccccccccccCCcEEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHH
Q 011969 379 PMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATE 456 (474)
Q Consensus 379 p~kv~Eama~G~PVia~~~~~~~e~v~~~~~G~l~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~ 456 (474)
|++++|||+||+|||+++.++..|++.++.+|++++ |+++++++|..++++ ++.++++++++++...+++|+..
T Consensus 339 ~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~----~~~~~~~~~~~~~~~~~~s~~~~ 414 (438)
T 3c48_A 339 GLVAMEAQASGTPVIAARVGGLPIAVAEGETGLLVDGHSPHAWADALATLLDD----DETRIRMGEDAVEHARTFSWAAT 414 (438)
T ss_dssp CHHHHHHHHTTCCEEEESCTTHHHHSCBTTTEEEESSCCHHHHHHHHHHHHHC----HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHcCCCEEecCCCChhHHhhCCCcEEECCCCCHHHHHHHHHHHHcC----HHHHHHHHHHHHHHHHhCCHHHH
Confidence 999999999999999999999999999999999997 799999999999994 88999999999998766888765
Q ss_pred HHHHHHHHHHHHh
Q 011969 457 WEEHAKPLITEVI 469 (474)
Q Consensus 457 ~~~~~~~~~~~~~ 469 (474)
.++ ...+++++.
T Consensus 415 ~~~-~~~~~~~~~ 426 (438)
T 3c48_A 415 AAQ-LSSLYNDAI 426 (438)
T ss_dssp HHH-HHHHHHHHH
T ss_pred HHH-HHHHHHHHh
Confidence 544 334444444
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-37 Score=312.77 Aligned_cols=354 Identities=14% Similarity=0.104 Sum_probs=264.7
Q ss_pred CCCCceEEEEEeCCCCCCchHHHHHHHHHhh-CCCeEEEEecCCCCCC-cceeccCCeEEEEeecCCCCCCCCCchhHHH
Q 011969 1 MGRRGRACVVVLGDLGRSPRMQYQALSLARQ-MSLEVDVVAYGGSKPH-AAILEHPSIHIHTMTQWPTIPRGLPKVLKPV 78 (474)
Q Consensus 1 m~~~~~~~i~~~~~~g~~~r~~~~a~~l~~~-~g~eV~Vv~~~~~~~~-~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~ 78 (474)
|+++++++++........++....+..+++. .||+|+|++....... .......++++++++... ....+...
T Consensus 1 M~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 75 (394)
T 3okp_A 1 MSASRKTLVVTNDFPPRIGGIQSYLRDFIATQDPESIVVFASTQNAEEAHAYDKTLDYEVIRWPRSV-----MLPTPTTA 75 (394)
T ss_dssp ---CCCEEEEESCCTTSCSHHHHHHHHHHTTSCGGGEEEEEECSSHHHHHHHHTTCSSEEEEESSSS-----CCSCHHHH
T ss_pred CCCCceEEEEeCccCCccchHHHHHHHHHHHhcCCeEEEEECCCCccchhhhccccceEEEEccccc-----cccchhhH
Confidence 7777777777654332334444444555554 4999999998764321 233346689999988211 11122233
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCEEEEeCCCChhHHHHHHHHHhhCCC-cEEEEecCchhhhhhhccCCCchHHHHHH
Q 011969 79 LLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRS-AFIVDWHNFGYTLLSLSLGRRSHFVSIYR 157 (474)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~h~~~~~~~~~~~~~~~~~~~~~~ 157 (474)
..+.+.+.+ .+||+||++.+..... ++.++++ .+. ++|+++|+..... ... ...+
T Consensus 76 ~~l~~~~~~------------~~~Dvv~~~~~~~~~~--~~~~~~~-~~~~~~i~~~h~~~~~~------~~~---~~~~ 131 (394)
T 3okp_A 76 HAMAEIIRE------------REIDNVWFGAAAPLAL--MAGTAKQ-AGASKVIASTHGHEVGW------SML---PGSR 131 (394)
T ss_dssp HHHHHHHHH------------TTCSEEEESSCTTGGG--GHHHHHH-TTCSEEEEECCSTHHHH------TTS---HHHH
T ss_pred HHHHHHHHh------------cCCCEEEECCcchHHH--HHHHHHh-cCCCcEEEEeccchhhh------hhc---chhh
Confidence 333333322 7899999988644322 2444444 455 4888999873211 111 2344
Q ss_pred HHHHHHhhhcCEEEEeCHHHHHHHHHHhCC--ceEEEeCCC-CCCCCCCChHHHHHHHHhhhhccCCCCCcccccccccc
Q 011969 158 WIEKYYGKMANGCLCVTQAMQHELAQNWGI--KATVLYDQP-PEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGM 234 (474)
Q Consensus 158 ~~e~~~~~~ad~vi~vS~~~~~~l~~~~~~--~~~vi~n~~-~~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 234 (474)
.+.+.+.+.+|.++++|+.+++.+.+.++. ++.+++|+. .+.|.+.....+..++++++
T Consensus 132 ~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~~~~~~~~~~~~~~~~------------------ 193 (394)
T 3okp_A 132 QSLRKIGTEVDVLTYISQYTLRRFKSAFGSHPTFEHLPSGVDVKRFTPATPEDKSATRKKLG------------------ 193 (394)
T ss_dssp HHHHHHHHHCSEEEESCHHHHHHHHHHHCSSSEEEECCCCBCTTTSCCCCHHHHHHHHHHTT------------------
T ss_pred HHHHHHHHhCCEEEEcCHHHHHHHHHhcCCCCCeEEecCCcCHHHcCCCCchhhHHHHHhcC------------------
Confidence 667778899999999999999999988765 489999994 46677756656677777776
Q ss_pred CCcCcchhhhhcccccccccCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCcccc
Q 011969 235 EGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYL 314 (474)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (474)
++++. ..++|+|++.+.||++.+++|+..+.++
T Consensus 194 -------------------~~~~~-~~i~~~G~~~~~Kg~~~li~a~~~l~~~--------------------------- 226 (394)
T 3okp_A 194 -------------------FTDTT-PVIACNSRLVPRKGQDSLIKAMPQVIAA--------------------------- 226 (394)
T ss_dssp -------------------CCTTC-CEEEEESCSCGGGCHHHHHHHHHHHHHH---------------------------
T ss_pred -------------------CCcCc-eEEEEEeccccccCHHHHHHHHHHHHhh---------------------------
Confidence 22333 3899999999999999999999998874
Q ss_pred CCCEEEEEEeCCCChHHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCCC-------CCCchHHHHHH
Q 011969 315 YPRLLFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSG-------LDLPMKVVDMF 386 (474)
Q Consensus 315 ~~~~~l~ivG~g~~~~~~~~~~~~l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~-------e~~p~kv~Eam 386 (474)
.|+++|+|+|+|+..+.+++.+ .++ ++|.|.|. ++.+++..+|+.||++|+ +|.. |++|++++|||
T Consensus 227 ~~~~~l~i~G~g~~~~~l~~~~--~~~~~~v~~~g~-~~~~~~~~~~~~ad~~v~---ps~~~~~~~~~e~~~~~~~Ea~ 300 (394)
T 3okp_A 227 RPDAQLLIVGSGRYESTLRRLA--TDVSQNVKFLGR-LEYQDMINTLAAADIFAM---PARTRGGGLDVEGLGIVYLEAQ 300 (394)
T ss_dssp STTCEEEEECCCTTHHHHHHHT--GGGGGGEEEEES-CCHHHHHHHHHHCSEEEE---CCCCBGGGTBCCSSCHHHHHHH
T ss_pred CCCeEEEEEcCchHHHHHHHHH--hcccCeEEEcCC-CCHHHHHHHHHhCCEEEe---cCccccccccccccCcHHHHHH
Confidence 6899999999999998888887 555 79999998 999999999999999999 5655 99999999999
Q ss_pred hcCCcEEEecccccccccccCCcEEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhcc-ccchHHHHHH
Q 011969 387 GCGLPVCAVSYSCIEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGL-SARWATEWEE 459 (474)
Q Consensus 387 a~G~PVia~~~~~~~e~v~~~~~G~l~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~w~~~~~~ 459 (474)
+||+|||+++.++..|++.++ +|++++ |+++++++|..++++ ++.++++++++++... .++|+..-++
T Consensus 301 a~G~PvI~~~~~~~~e~i~~~-~g~~~~~~d~~~l~~~i~~l~~~----~~~~~~~~~~~~~~~~~~~s~~~~~~~ 371 (394)
T 3okp_A 301 ACGVPVIAGTSGGAPETVTPA-TGLVVEGSDVDKLSELLIELLDD----PIRRAAMGAAGRAHVEAEWSWEIMGER 371 (394)
T ss_dssp HTTCCEEECSSTTGGGGCCTT-TEEECCTTCHHHHHHHHHHHHTC----HHHHHHHHHHHHHHHHHHTBHHHHHHH
T ss_pred HcCCCEEEeCCCChHHHHhcC-CceEeCCCCHHHHHHHHHHHHhC----HHHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 999999999999999999888 999997 899999999999994 8999999999998764 4888765544
|
| >3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-37 Score=317.27 Aligned_cols=385 Identities=16% Similarity=0.123 Sum_probs=272.3
Q ss_pred eEEEEEeC----CCCCCch-HHHHHHHHHhhCCCeEEEEecCCCCCCcce-----------------eccCCeEEEEeec
Q 011969 6 RACVVVLG----DLGRSPR-MQYQALSLARQMSLEVDVVAYGGSKPHAAI-----------------LEHPSIHIHTMTQ 63 (474)
Q Consensus 6 ~~~i~~~~----~~g~~~r-~~~~a~~l~~~~g~eV~Vv~~~~~~~~~~~-----------------~~~~gi~i~~~~~ 63 (474)
+++++... ..||..+ +...+..|+++ ||+|+|++.......... ...+|+++++++.
T Consensus 4 kIl~v~~~~~p~~~gG~~~~~~~la~~L~~~-G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~ 82 (439)
T 3fro_A 4 KVLLLGFEFLPVKVGGLAEALTAISEALASL-GHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRIGG 82 (439)
T ss_dssp EEEEECSCCTTSCSSSHHHHHHHHHHHHHHT-TCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEEEES
T ss_pred EEEEEecccCCcccCCHHHHHHHHHHHHHHC-CCeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEEEecc
Confidence 35544432 4566555 55667888886 999999997654432111 1457999999983
Q ss_pred CCCCCCC-CCchhHH-HHHHHHHHHHHHHHHHHHhhhcCCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhh
Q 011969 64 WPTIPRG-LPKVLKP-VLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTL 141 (474)
Q Consensus 64 ~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~ 141 (474)
....... ....... ...+.........++..++.+..+||+||+|++ ....++.++++..++|+|+++|+.....
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~---~~~~~~~~~~~~~~~~~v~~~h~~~~~~ 159 (439)
T 3fro_A 83 GLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDW---HTVFAGALIKKYFKIPAVFTIHRLNKSK 159 (439)
T ss_dssp GGGGCSSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESG---GGHHHHHHHHHHHCCCEEEEESCCCCCC
T ss_pred hhccccccccCCcchhhhhhHHHHHHHHHHHHHHhccCCCCeEEEecch---hhhhhHHHHhhccCCCEEEEeccccccc
Confidence 1100110 1101111 222222222222233333333479999999984 3444566667778999999999984211
Q ss_pred hhhcc---CCCchH-HHHHHHHHHHHhhhcCEEEEeCHHHHHHHHHHh---CCceEEEeCCC-CCCCCCC-----ChHHH
Q 011969 142 LSLSL---GRRSHF-VSIYRWIEKYYGKMANGCLCVTQAMQHELAQNW---GIKATVLYDQP-PEFFHPT-----SLEEK 208 (474)
Q Consensus 142 ~~~~~---~~~~~~-~~~~~~~e~~~~~~ad~vi~vS~~~~~~l~~~~---~~~~~vi~n~~-~~~f~~~-----~~~~~ 208 (474)
..... ...... ......+++...+.||.++++|+.+++.....+ ..++.+++|+. .+.|.|. ....+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~~~~~~~~~~i~vi~ngvd~~~~~~~~~~~~~~~~~ 239 (439)
T 3fro_A 160 LPAFYFHEAGLSELAPYPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNGIDCSFWNESYLTGSRDERK 239 (439)
T ss_dssp EEHHHHHHTTCGGGCCSSEECHHHHHHHHCSEEEESCHHHHHHTHHHHGGGTTSEEECCCCCCTTTSCGGGSCSCHHHHH
T ss_pred CchHHhCccccccccccceeeHhhhhhhhccEEEecCHHHHHHHhhhhhhcCCceeecCCCCCchhcCcccccchhhhhH
Confidence 00000 000000 000015677888899999999999988855533 45699999994 4666655 23355
Q ss_pred HHHHHhhhhccCCCCCccccccccccCCcCcchhhhhcccccccccCCCCCeEEEEEeecc-cCCCHHHHHHHHHHhHHH
Q 011969 209 HELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWT-PDEDFGILLEAALMYDRR 287 (474)
Q Consensus 209 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~l~-~~k~~~~Li~a~~~l~~~ 287 (474)
..++++++ ++++ .+++|+|++. +.||++.+++|++.+.++
T Consensus 240 ~~~~~~~~-------------------------------------~~~~--~~i~~~G~~~~~~Kg~~~li~a~~~l~~~ 280 (439)
T 3fro_A 240 KSLLSKFG-------------------------------------MDEG--VTFMFIGRFDRGQKGVDVLLKAIEILSSK 280 (439)
T ss_dssp HHHHHHHT-------------------------------------CCSC--EEEEEECCSSCTTBCHHHHHHHHHHHHTS
T ss_pred HHHHHHcC-------------------------------------CCCC--cEEEEEcccccccccHHHHHHHHHHHHhc
Confidence 66777776 2233 4999999999 999999999999998762
Q ss_pred HhhhhccCCCchhhHhHhhhcCCccccC--CCEEEEEEeCCCCh--HHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcc
Q 011969 288 VAAILNEDDSTNEEVFLKEISDGKQYLY--PRLLFIITGKGPDK--ESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSA 363 (474)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~ivG~g~~~--~~~~~~~~~l~l~~V~f~g~~v~~~~~~~~l~~a 363 (474)
. ++++|+|+|+|+.. +.+++.+++++ +.+.|.|. ++.+++..+|+.|
T Consensus 281 ---------------------------~~~~~~~l~i~G~g~~~~~~~l~~~~~~~~-~~~~~~g~-~~~~~~~~~~~~a 331 (439)
T 3fro_A 281 ---------------------------KEFQEMRFIIIGKGDPELEGWARSLEEKHG-NVKVITEM-LSREFVRELYGSV 331 (439)
T ss_dssp ---------------------------GGGGGEEEEEECCCCHHHHHHHHHHHHHCT-TEEEECSC-CCHHHHHHHHTTC
T ss_pred ---------------------------ccCCCeEEEEEcCCChhHHHHHHHHHhhcC-CEEEEcCC-CCHHHHHHHHHHC
Confidence 4 78999999999977 88999999998 77778776 9999999999999
Q ss_pred cEEEeeccCCCCCCCchHHHHHHhcCCcEEEecccccccccccCCcEEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHH
Q 011969 364 DLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLR 441 (474)
Q Consensus 364 dv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~~~~e~v~~~~~G~l~~--~~~~la~~i~~l~~~~~~~~~~~~~~~ 441 (474)
|++|+ ||..|++|++++||||||+|||+++.++..|++.++ +|++++ |+++++++|..+++. +++.+++++
T Consensus 332 dv~v~---ps~~e~~~~~~~EAma~G~Pvi~s~~~~~~e~~~~~-~g~~~~~~d~~~la~~i~~ll~~---~~~~~~~~~ 404 (439)
T 3fro_A 332 DFVII---PSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITNE-TGILVKAGDPGELANAILKALEL---SRSDLSKFR 404 (439)
T ss_dssp SEEEE---CBSCCSSCHHHHHHHHTTCEEEEESSTHHHHHCCTT-TCEEECTTCHHHHHHHHHHHHHH---TTTTTHHHH
T ss_pred CEEEe---CCCCCCccHHHHHHHHCCCCeEEcCCCCcceeEEcC-ceEEeCCCCHHHHHHHHHHHHhc---CHHHHHHHH
Confidence 99999 677799999999999999999999999999999876 999997 799999999999983 377889999
Q ss_pred HHHHHhccccchHHHHHHHHHHHHHHHhh
Q 011969 442 NGTLEMGLSARWATEWEEHAKPLITEVIS 470 (474)
Q Consensus 442 ~~~~~~~~~~~w~~~~~~~~~~~~~~~~~ 470 (474)
+++++.+++++|+...++ ...++++++.
T Consensus 405 ~~~~~~~~~~s~~~~~~~-~~~~~~~~~~ 432 (439)
T 3fro_A 405 ENCKKRAMSFSWEKSAER-YVKAYTGSID 432 (439)
T ss_dssp HHHHHHHHTSCHHHHHHH-HHHHHHTCSC
T ss_pred HHHHHHHhhCcHHHHHHH-HHHHHHHHHH
Confidence 999988878999876655 3445555443
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-36 Score=317.80 Aligned_cols=389 Identities=14% Similarity=0.080 Sum_probs=270.1
Q ss_pred CCCCceEEEEEeC--------------CCCCCchH-HHHHHHHHhhCCCeEEEEecCCCCCC-cc----eec---cCCeE
Q 011969 1 MGRRGRACVVVLG--------------DLGRSPRM-QYQALSLARQMSLEVDVVAYGGSKPH-AA----ILE---HPSIH 57 (474)
Q Consensus 1 m~~~~~~~i~~~~--------------~~g~~~r~-~~~a~~l~~~~g~eV~Vv~~~~~~~~-~~----~~~---~~gi~ 57 (474)
|+++.+|+++... ..||..+. ...+..|+++ ||+|+|++....... .. ... ..|++
T Consensus 4 m~~~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~-G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~gv~ 82 (499)
T 2r60_A 4 MTRIKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEM-GVQVDIITRRIKDENWPEFSGEIDYYQETNKVR 82 (499)
T ss_dssp ---CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHT-TCEEEEEEECCCBTTBGGGCCSEEECTTCSSEE
T ss_pred ccccceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhc-CCeEEEEeCCCCcccccchhhhHHhccCCCCeE
Confidence 5554566666543 24555443 4456777786 999999997643211 11 111 46999
Q ss_pred EEEeecCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhc-CCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecC
Q 011969 58 IHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKI-ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHN 136 (474)
Q Consensus 58 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~ 136 (474)
+++++...........+...+..+ ... +...+.+. .+||+||+|.+ ....++.++++..++|+|+++|+
T Consensus 83 v~~~~~~~~~~~~~~~~~~~~~~~---~~~----l~~~l~~~~~~~Divh~~~~---~~~~~~~~~~~~~~~p~v~~~H~ 152 (499)
T 2r60_A 83 IVRIPFGGDKFLPKEELWPYLHEY---VNK----IINFYREEGKFPQVVTTHYG---DGGLAGVLLKNIKGLPFTFTGHS 152 (499)
T ss_dssp EEEECCSCSSCCCGGGCGGGHHHH---HHH----HHHHHHHHTCCCSEEEEEHH---HHHHHHHHHHHHHCCCEEEECSS
T ss_pred EEEecCCCcCCcCHHHHHHHHHHH---HHH----HHHHHHhcCCCCCEEEEcCC---cchHHHHHHHHhcCCcEEEEccC
Confidence 999983221111111111111111 111 11122222 48999999983 33445666677778999999999
Q ss_pred chhhhhhhccC--CC-chHHH-----HHHHHHHHHhhhcCEEEEeCHHHHHHHHHH--hC-C-------ceEEEeCCC-C
Q 011969 137 FGYTLLSLSLG--RR-SHFVS-----IYRWIEKYYGKMANGCLCVTQAMQHELAQN--WG-I-------KATVLYDQP-P 197 (474)
Q Consensus 137 ~~~~~~~~~~~--~~-~~~~~-----~~~~~e~~~~~~ad~vi~vS~~~~~~l~~~--~~-~-------~~~vi~n~~-~ 197 (474)
........... .. ..+.. ...++++.+.+.||.++++|+.+++.+.+. +| . ++.+++|+. .
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~g~~~~~~~~~ki~vi~ngvd~ 232 (499)
T 2r60_A 153 LGAQKMEKLNVNTSNFKEMDERFKFHRRIIAERLTMSYADKIIVSTSQERFGQYSHDLYRGAVNVEDDDKFSVIPPGVNT 232 (499)
T ss_dssp CHHHHHHTTCCCSTTSHHHHHHHCHHHHHHHHHHHHHHCSEEEESSHHHHHHTTTSGGGTTTCCTTCGGGEEECCCCBCT
T ss_pred cccccchhhccCCCCcchhhhhHHHHHHHHHHHHHHhcCCEEEECCHHHHHHHHhhhcccccccccCCCCeEEECCCcCh
Confidence 85322211100 00 11111 234567888999999999999999988876 66 3 489999994 4
Q ss_pred CCCCCCCh-HHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhcccccccccCCCCCeEEEEEeecccCCCHHH
Q 011969 198 EFFHPTSL-EEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGI 276 (474)
Q Consensus 198 ~~f~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~l~~~k~~~~ 276 (474)
+.|.+... ..+..+++++|... ..++++.+ +++|+|++.+.||++.
T Consensus 233 ~~~~~~~~~~~~~~~r~~~~~~~--------------------------------~~~~~~~~-~i~~vGrl~~~Kg~~~ 279 (499)
T 2r60_A 233 RVFDGEYGDKIKAKITKYLERDL--------------------------------GSERMELP-AIIASSRLDQKKNHYG 279 (499)
T ss_dssp TTSSSCCCHHHHHHHHHHHHHHS--------------------------------CGGGTTSC-EEEECSCCCGGGCHHH
T ss_pred hhcCccchhhhHHHHHHHhcccc--------------------------------cccCCCCc-EEEEeecCccccCHHH
Confidence 66766532 23455666655100 00113334 8999999999999999
Q ss_pred HHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCC-CEEEEEEeC--CC------C-------hHHHHHHHHHcC
Q 011969 277 LLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYP-RLLFIITGK--GP------D-------KESYEEKIRRLR 340 (474)
Q Consensus 277 Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~ivG~--g~------~-------~~~~~~~~~~l~ 340 (474)
+++|+..+.++ .+ .++|+|+|+ |+ . .+++++.+++++
T Consensus 280 li~a~~~l~~~---------------------------~~~~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~ 332 (499)
T 2r60_A 280 LVEAYVQNKEL---------------------------QDKANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNND 332 (499)
T ss_dssp HHHHHHTCHHH---------------------------HHHCEEEEEESSCSBTTTBCTTSCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHh---------------------------CCCceEEEEECCCCCcccccccccccchHHHHHHHHHHHhcC
Confidence 99999998763 23 368999998 44 1 678899999999
Q ss_pred C-CcEEEecCCCCcccHHHHHhcc----cEEEeeccCCCCCCCchHHHHHHhcCCcEEEecccccccccccCCcEEEeC-
Q 011969 341 L-KRVAFRTMWLSAEDYPLLLGSA----DLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFS- 414 (474)
Q Consensus 341 l-~~V~f~g~~v~~~~~~~~l~~a----dv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~~~~e~v~~~~~G~l~~- 414 (474)
+ ++|.|+|. ++.+++..+|+.| |++|+ ||..|+||++++||||||+|||+++.++..|++.++.+|++++
T Consensus 333 l~~~V~~~G~-v~~~~~~~~~~~a~~~~dv~v~---pS~~Eg~~~~~lEAma~G~PvI~s~~~g~~e~v~~~~~g~l~~~ 408 (499)
T 2r60_A 333 CRGKVSMFPL-NSQQELAGCYAYLASKGSVFAL---TSFYEPFGLAPVEAMASGLPAVVTRNGGPAEILDGGKYGVLVDP 408 (499)
T ss_dssp CBTTEEEEEC-CSHHHHHHHHHHHHHTTCEEEE---CCSCBCCCSHHHHHHHTTCCEEEESSBHHHHHTGGGTSSEEECT
T ss_pred CCceEEECCC-CCHHHHHHHHHhcCcCCCEEEE---CcccCCCCcHHHHHHHcCCCEEEecCCCHHHHhcCCceEEEeCC
Confidence 9 68999998 9999999999999 99999 6888999999999999999999999999999999999999996
Q ss_pred -CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccc-cchHHHHHHHHHHHHHHHh
Q 011969 415 -SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLS-ARWATEWEEHAKPLITEVI 469 (474)
Q Consensus 415 -~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~w~~~~~~~~~~~~~~~~ 469 (474)
|+++++++|..++++ ++.++++++++++.+.+ ++|+...+++ ..+++++.
T Consensus 409 ~d~~~la~~i~~ll~~----~~~~~~~~~~a~~~~~~~fs~~~~~~~~-~~~y~~~~ 460 (499)
T 2r60_A 409 EDPEDIARGLLKAFES----EETWSAYQEKGKQRVEERYTWQETARGY-LEVIQEIA 460 (499)
T ss_dssp TCHHHHHHHHHHHHSC----HHHHHHHHHHHHHHHHHHSBHHHHHHHH-HHHHHHHH
T ss_pred CCHHHHHHHHHHHHhC----HHHHHHHHHHHHHHHHHhCCHHHHHHHH-HHHHHHHH
Confidence 799999999999984 88999999999987755 9998766553 34444443
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-35 Score=302.88 Aligned_cols=360 Identities=14% Similarity=0.182 Sum_probs=259.1
Q ss_pred EEEEEeCCCCCCchHH-HHHHHHHhhCCCeEEEEecCCCCCCcceeccCCeEEEEeecCCCCCCCCCchhHHHHHHHHHH
Q 011969 7 ACVVVLGDLGRSPRMQ-YQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPL 85 (474)
Q Consensus 7 ~~i~~~~~~g~~~r~~-~~a~~l~~~~g~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (474)
+........||..+.. ..+..|+++ ||+|+|++....... ....+++.++.++.... .........+...
T Consensus 18 ~~~~~~p~~GG~~~~~~~la~~L~~~-G~~V~v~~~~~~~~~--~~~~~~i~~~~~~~~~~--~~~~~~~~~~~~~---- 88 (394)
T 2jjm_A 18 IGITCYPSVGGSGVVGTELGKQLAER-GHEIHFITSGLPFRL--NKVYPNIYFHEVTVNQY--SVFQYPPYDLALA---- 88 (394)
T ss_dssp EEEECCC--CHHHHHHHHHHHHHHHT-TCEEEEECSSCC------CCCTTEEEECCCCC------CCSCCHHHHHH----
T ss_pred eehhcCCCCCCHHHHHHHHHHHHHhC-CCEEEEEeCCCCCcc--cccCCceEEEecccccc--cccccccccHHHH----
Confidence 3444445566665544 556788886 999999997643211 12346888877762111 1111111111111
Q ss_pred HHHHHHHHHHhhhcCCCCEEEEeCCCChhHHHHHHHHHhhC--CCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHH
Q 011969 86 IQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLR--RSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYY 163 (474)
Q Consensus 86 ~~~~~~~~~~~~~~~~~Dvi~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 163 (474)
.. +...+. ..+||+||++.+. +....+.+++++. ++|+|+++|+...... +... .++.+++.+
T Consensus 89 ~~----l~~~l~-~~~~Dvv~~~~~~--~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~----~~~~----~~~~~~~~~ 153 (394)
T 2jjm_A 89 SK----MAEVAQ-RENLDILHVHYAI--PHAICAYLAKQMIGERIKIVTTLHGTDITVL----GSDP----SLNNLIRFG 153 (394)
T ss_dssp HH----HHHHHH-HHTCSEEEECSST--THHHHHHHHHHHTTTCSEEEEECCHHHHHTT----TTCT----TTHHHHHHH
T ss_pred HH----HHHHHH-HcCCCEEEEcchh--HHHHHHHHHHHhhcCCCCEEEEEecCccccc----CCCH----HHHHHHHHH
Confidence 11 111122 2689999999753 3333344555544 5899999999643111 1111 123566777
Q ss_pred hhhcCEEEEeCHHHHHHHHHHhCC--ceEEEeCCCC-CCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcc
Q 011969 164 GKMANGCLCVTQAMQHELAQNWGI--KATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKAD 240 (474)
Q Consensus 164 ~~~ad~vi~vS~~~~~~l~~~~~~--~~~vi~n~~~-~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (474)
.+.||.++++|+.+++.+.+.++. ++.+++|+.+ +.|.+.. ...++++++
T Consensus 154 ~~~ad~ii~~s~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~~~~---~~~~~~~~~------------------------ 206 (394)
T 2jjm_A 154 IEQSDVVTAVSHSLINETHELVKPNKDIQTVYNFIDERVYFKRD---MTQLKKEYG------------------------ 206 (394)
T ss_dssp HHHSSEEEESCHHHHHHHHHHTCCSSCEEECCCCCCTTTCCCCC---CHHHHHHTT------------------------
T ss_pred HhhCCEEEECCHHHHHHHHHhhCCcccEEEecCCccHHhcCCcc---hHHHHHHcC------------------------
Confidence 889999999999999999887764 5899999954 5565542 233444444
Q ss_pred hhhhhcccccccccCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEE
Q 011969 241 ETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLF 320 (474)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 320 (474)
++++. ..++|+|++.+.||++.+++|+..+.+ .++++|
T Consensus 207 -------------~~~~~-~~i~~~G~~~~~Kg~~~li~a~~~l~~----------------------------~~~~~l 244 (394)
T 2jjm_A 207 -------------ISESE-KILIHISNFRKVKRVQDVVQAFAKIVT----------------------------EVDAKL 244 (394)
T ss_dssp -------------CC----CEEEEECCCCGGGTHHHHHHHHHHHHH----------------------------SSCCEE
T ss_pred -------------CCCCC-eEEEEeeccccccCHHHHHHHHHHHHh----------------------------hCCCEE
Confidence 21223 389999999999999999999999877 256899
Q ss_pred EEEeCCCChHHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecccc
Q 011969 321 IITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC 399 (474)
Q Consensus 321 ~ivG~g~~~~~~~~~~~~l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~~ 399 (474)
+|+|+|++.+++++.++++++ ++|.|.|. .+++..+|+.||++|+ ||..|++|++++|||+||+|||+++.++
T Consensus 245 ~i~G~g~~~~~l~~~~~~~~l~~~v~~~g~---~~~~~~~~~~adv~v~---ps~~e~~~~~~~EAma~G~PvI~~~~~~ 318 (394)
T 2jjm_A 245 LLVGDGPEFCTILQLVKNLHIEDRVLFLGK---QDNVAELLAMSDLMLL---LSEKESFGLVLLEAMACGVPCIGTRVGG 318 (394)
T ss_dssp EEECCCTTHHHHHHHHHTTTCGGGBCCCBS---CSCTHHHHHTCSEEEE---CCSCCSCCHHHHHHHHTTCCEEEECCTT
T ss_pred EEECCchHHHHHHHHHHHcCCCCeEEEeCc---hhhHHHHHHhCCEEEe---ccccCCCchHHHHHHhcCCCEEEecCCC
Confidence 999999999999999999998 79999996 7999999999999999 6778999999999999999999999999
Q ss_pred cccccccCCcEEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc-cccchHHHHHHHHHHHHHHHhh
Q 011969 400 IEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARWATEWEEHAKPLITEVIS 470 (474)
Q Consensus 400 ~~e~v~~~~~G~l~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~~~~~~~~~~~~~~ 470 (474)
..|++.++.+|++++ |+++++++|..++++ ++.++++++++++.. +.++|+...++ ...+++++..
T Consensus 319 ~~e~v~~~~~g~~~~~~d~~~la~~i~~l~~~----~~~~~~~~~~~~~~~~~~~s~~~~~~~-~~~~~~~~~~ 387 (394)
T 2jjm_A 319 IPEVIQHGDTGYLCEVGDTTGVADQAIQLLKD----EELHRNMGERARESVYEQFRSEKIVSQ-YETIYYDVLR 387 (394)
T ss_dssp STTTCCBTTTEEEECTTCHHHHHHHHHHHHHC----HHHHHHHHHHHHHHHHHHSCHHHHHHH-HHHHHHHTC-
T ss_pred hHHHhhcCCceEEeCCCCHHHHHHHHHHHHcC----HHHHHHHHHHHHHHHHHhCCHHHHHHH-HHHHHHHHHh
Confidence 999999999999997 799999999999994 889999999999877 78999876655 4455555544
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-35 Score=300.30 Aligned_cols=335 Identities=13% Similarity=0.086 Sum_probs=239.4
Q ss_pred CCCCCch-HHHHHHHHHhhCCCeEEEEecCCCCCCcceeccCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHHHHH
Q 011969 14 DLGRSPR-MQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLL 92 (474)
Q Consensus 14 ~~g~~~r-~~~~a~~l~~~~g~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (474)
..||..+ +...+..|+++ ||+|+|++...... ...+++++.++. . ........ ...... +
T Consensus 12 ~~gG~~~~~~~l~~~L~~~-G~~V~v~~~~~~~~-----~~~~~~v~~~~~--~---~~~~~~~~----~~~~~~----l 72 (374)
T 2iw1_A 12 PFGGLQRDFMRIASTVAAR-GHHVRVYTQSWEGD-----CPKAFELIQVPV--K---SHTNHGRN----AEYYAW----V 72 (374)
T ss_dssp TTCHHHHHHHHHHHHHHHT-TCCEEEEESEECSC-----CCTTCEEEECCC--C---CSSHHHHH----HHHHHH----H
T ss_pred CCcchhhHHHHHHHHHHhC-CCeEEEEecCCCCC-----CCCCcEEEEEcc--C---cccchhhH----HHHHHH----H
Confidence 3566555 45567788886 99999999763221 124888888872 1 11111111 111111 1
Q ss_pred HHHhhhcCCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhh--hcCEE
Q 011969 93 WFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGK--MANGC 170 (474)
Q Consensus 93 ~~~~~~~~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~--~ad~v 170 (474)
...+ +..+||+||++++..... +.++.+..+.+.+.+.|+... ........+.++++..++ .+|.+
T Consensus 73 ~~~i-~~~~~Dvv~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~d~i 140 (374)
T 2iw1_A 73 QNHL-KEHPADRVVGFNKMPGLD---VYFAADVCYAEKVAQEKGFLY--------RLTSRYRHYAAFERATFEQGKSTKL 140 (374)
T ss_dssp HHHH-HHSCCSEEEESSCCTTCS---EEECCSCCHHHHHHHHCCHHH--------HTSHHHHHHHHHHHHHHSTTCCCEE
T ss_pred HHHH-hccCCCEEEEecCCCCce---eeeccccccceeeeecccchh--------hhcHHHHHHHHHHHHHhhccCCcEE
Confidence 1222 227899999987422111 001111122233333444311 111222445567777665 69999
Q ss_pred EEeCHHHHHHHHHHhCC---ceEEEeCCCC-CCCCCCC-hHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhh
Q 011969 171 LCVTQAMQHELAQNWGI---KATVLYDQPP-EFFHPTS-LEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFT 245 (474)
Q Consensus 171 i~vS~~~~~~l~~~~~~---~~~vi~n~~~-~~f~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (474)
+++|+.+++.+.+.++. ++.+++|+.+ +.|.+.. ...+..++++++
T Consensus 141 i~~s~~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~~~~~~~~~~~~~~~~~----------------------------- 191 (374)
T 2iw1_A 141 MMLTDKQIADFQKHYQTEPERFQILPPGIYPDRKYSEQIPNSREIYRQKNG----------------------------- 191 (374)
T ss_dssp EESCHHHHHHHHHHHCCCGGGEEECCCCCCGGGSGGGSCTTHHHHHHHHTT-----------------------------
T ss_pred EEcCHHHHHHHHHHhCCChhheEEecCCcCHHhcCcccchhHHHHHHHHhC-----------------------------
Confidence 99999999999887775 3899999854 5555543 224455666666
Q ss_pred cccccccccCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeC
Q 011969 246 SLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGK 325 (474)
Q Consensus 246 ~~~~~~~~~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~ 325 (474)
++. ...+++|+|++.+.||++.+++|+..+.++ ..++++|+|+|+
T Consensus 192 --------~~~-~~~~i~~~G~~~~~K~~~~li~a~~~l~~~--------------------------~~~~~~l~i~G~ 236 (374)
T 2iw1_A 192 --------IKE-QQNLLLQVGSDFGRKGVDRSIEALASLPES--------------------------LRHNTLLFVVGQ 236 (374)
T ss_dssp --------CCT-TCEEEEEECSCTTTTTHHHHHHHHHTSCHH--------------------------HHHTEEEEEESS
T ss_pred --------CCC-CCeEEEEeccchhhcCHHHHHHHHHHhHhc--------------------------cCCceEEEEEcC
Confidence 222 334899999999999999999999988652 136899999999
Q ss_pred CCChHHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEeccccccccc
Q 011969 326 GPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELV 404 (474)
Q Consensus 326 g~~~~~~~~~~~~l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~~~~e~v 404 (474)
|+. +++++.++++++ ++|.|+|. .+++..+|+.||++|+ ||..|++|++++|||+||+|||+++.++..|++
T Consensus 237 g~~-~~~~~~~~~~~~~~~v~~~g~---~~~~~~~~~~ad~~v~---ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i 309 (374)
T 2iw1_A 237 DKP-RKFEALAEKLGVRSNVHFFSG---RNDVSELMAAADLLLH---PAYQEAAGIVLLEAITAGLPVLTTAVCGYAHYI 309 (374)
T ss_dssp SCC-HHHHHHHHHHTCGGGEEEESC---CSCHHHHHHHCSEEEE---CCSCCSSCHHHHHHHHHTCCEEEETTSTTTHHH
T ss_pred CCH-HHHHHHHHHcCCCCcEEECCC---cccHHHHHHhcCEEEe---ccccCCcccHHHHHHHCCCCEEEecCCCchhhh
Confidence 874 678999999998 79999997 7899999999999999 677899999999999999999999999999999
Q ss_pred ccCCcEEEeC---CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchH
Q 011969 405 KVDKNGLLFS---SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWA 454 (474)
Q Consensus 405 ~~~~~G~l~~---~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~ 454 (474)
.++.+|++++ |+++++++|..++++ ++.++++++++++.+.+++|.
T Consensus 310 ~~~~~g~~~~~~~~~~~l~~~i~~l~~~----~~~~~~~~~~~~~~~~~~~~~ 358 (374)
T 2iw1_A 310 ADANCGTVIAEPFSQEQLNEVLRKALTQ----SPLRMAWAENARHYADTQDLY 358 (374)
T ss_dssp HHHTCEEEECSSCCHHHHHHHHHHHHHC----HHHHHHHHHHHHHHHHHSCCS
T ss_pred ccCCceEEeCCCCCHHHHHHHHHHHHcC----hHHHHHHHHHHHHHHHHhhHH
Confidence 9999999986 799999999999994 889999999999877665554
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-34 Score=292.75 Aligned_cols=355 Identities=14% Similarity=0.125 Sum_probs=247.3
Q ss_pred CCceEEEEEeCC---CCCCc-hHHHHHHHHHhhCCCeEEEEecCCCCC-CcceeccCCeEEEEeecCCCCCCCCCchhHH
Q 011969 3 RRGRACVVVLGD---LGRSP-RMQYQALSLARQMSLEVDVVAYGGSKP-HAAILEHPSIHIHTMTQWPTIPRGLPKVLKP 77 (474)
Q Consensus 3 ~~~~~~i~~~~~---~g~~~-r~~~~a~~l~~~~g~eV~Vv~~~~~~~-~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~ 77 (474)
++++++++.... .||.. ++...+..|.++ ||+|++++...... ........+ +++.++.... ..........
T Consensus 19 ~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~-G~~V~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~ 95 (406)
T 2gek_A 19 SHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDA-GHEVSVLAPASPHVKLPDYVVSGG-KAVPIPYNGS-VARLRFGPAT 95 (406)
T ss_dssp --CEEEEECSSCTTSCCHHHHHHHHHHHHHHHT-TCEEEEEESCCTTSCCCTTEEECC-CCC-------------CCHHH
T ss_pred CcceEEEEeccCCCCCCcHHHHHHHHHHHHHHC-CCeEEEEecCCccccCCcccccCC-cEEeccccCC-cccccccHHH
Confidence 344566555321 24433 455667788886 99999999775432 112222222 3444431000 0000000001
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCchHHHHHH
Q 011969 78 VLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYR 157 (474)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~ 157 (474)
...+. ..+.+ .+||+||++.+..... +..+++..++|+|+++|+... .......+.+
T Consensus 96 ~~~l~-----------~~l~~-~~~Dii~~~~~~~~~~---~~~~~~~~~~~~i~~~h~~~~--------~~~~~~~~~~ 152 (406)
T 2gek_A 96 HRKVK-----------KWIAE-GDFDVLHIHEPNAPSL---SMLALQAAEGPIVATFHTSTT--------KSLTLSVFQG 152 (406)
T ss_dssp HHHHH-----------HHHHH-HCCSEEEEECCCSSSH---HHHHHHHEESSEEEEECCCCC--------SHHHHHHHHS
T ss_pred HHHHH-----------HHHHh-cCCCEEEECCccchHH---HHHHHHhcCCCEEEEEcCcch--------hhhhHHHHHH
Confidence 11111 11222 6899999998755433 334455568999999999721 1112223333
Q ss_pred HHHHHHhhhcCEEEEeCHHHHHHHHHHhCCc-eEEEeCCCC-CCCCCCChHHHHHHHHhhhhccCCCCCccccccccccC
Q 011969 158 WIEKYYGKMANGCLCVTQAMQHELAQNWGIK-ATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGME 235 (474)
Q Consensus 158 ~~e~~~~~~ad~vi~vS~~~~~~l~~~~~~~-~~vi~n~~~-~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 235 (474)
+++ .+.+.+|.++++|+.+++.+.+.++.+ + +++|+.+ +.|.+....
T Consensus 153 ~~~-~~~~~~d~ii~~s~~~~~~~~~~~~~~~~-vi~~~v~~~~~~~~~~~----------------------------- 201 (406)
T 2gek_A 153 ILR-PYHEKIIGRIAVSDLARRWQMEALGSDAV-EIPNGVDVASFADAPLL----------------------------- 201 (406)
T ss_dssp TTH-HHHTTCSEEEESSHHHHHHHHHHHSSCEE-ECCCCBCHHHHHTCCCC-----------------------------
T ss_pred HHH-HHHhhCCEEEECCHHHHHHHHHhcCCCcE-EecCCCChhhcCCCchh-----------------------------
Confidence 444 667899999999999999998877765 6 8888744 222222100
Q ss_pred CcCcchhhhhcccccccccCCCCCeEEEEEeec-ccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCcccc
Q 011969 236 GQKADETIFTSLAGIDVFLKPNRPALVVSSTSW-TPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYL 314 (474)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~l-~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (474)
...+.+. ..++|+|++ .+.||++.+++|+..+.+ .
T Consensus 202 ----------------~~~~~~~-~~i~~~G~~~~~~Kg~~~li~a~~~l~~---------------------------~ 237 (406)
T 2gek_A 202 ----------------DGYPREG-RTVLFLGRYDEPRKGMAVLLAALPKLVA---------------------------R 237 (406)
T ss_dssp ----------------TTCSCSS-CEEEEESCTTSGGGCHHHHHHHHHHHHT---------------------------T
T ss_pred ----------------hhccCCC-eEEEEEeeeCccccCHHHHHHHHHHHHH---------------------------H
Confidence 0011233 389999999 999999999999999876 3
Q ss_pred CCCEEEEEEeCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcccEEEeeccCC-CCCCCchHHHHHHhcCCcEE
Q 011969 315 YPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSS-SGLDLPMKVVDMFGCGLPVC 393 (474)
Q Consensus 315 ~~~~~l~ivG~g~~~~~~~~~~~~l~l~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s-~~e~~p~kv~Eama~G~PVi 393 (474)
.|+++|+|+|+|+. +++++.++++ .++|.|.|. ++.+++..+|+.||++|+ +| ..|++|++++|||+||+|||
T Consensus 238 ~~~~~l~i~G~~~~-~~l~~~~~~~-~~~v~~~g~-~~~~~~~~~~~~adv~v~---ps~~~e~~~~~~~Ea~a~G~PvI 311 (406)
T 2gek_A 238 FPDVEILIVGRGDE-DELREQAGDL-AGHLRFLGQ-VDDATKASAMRSADVYCA---PHLGGESFGIVLVEAMAAGTAVV 311 (406)
T ss_dssp STTCEEEEESCSCH-HHHHHHTGGG-GGGEEECCS-CCHHHHHHHHHHSSEEEE---CCCSCCSSCHHHHHHHHHTCEEE
T ss_pred CCCeEEEEEcCCcH-HHHHHHHHhc-cCcEEEEec-CCHHHHHHHHHHCCEEEe---cCCCCCCCchHHHHHHHcCCCEE
Confidence 68999999999988 8888888777 469999998 999999999999999999 56 48999999999999999999
Q ss_pred EecccccccccccCCcEEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHh
Q 011969 394 AVSYSCIEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEVI 469 (474)
Q Consensus 394 a~~~~~~~e~v~~~~~G~l~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 469 (474)
+++.++..|++.++.+|++++ |+++++++|..++++ ++.++++++++++.+..++|+...++ +..+++++.
T Consensus 312 ~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~----~~~~~~~~~~~~~~~~~~s~~~~~~~-~~~~~~~~~ 384 (406)
T 2gek_A 312 ASDLDAFRRVLADGDAGRLVPVDDADGMAAALIGILED----DQLRAGYVARASERVHRYDWSVVSAQ-IMRVYETVS 384 (406)
T ss_dssp ECCCHHHHHHHTTTTSSEECCTTCHHHHHHHHHHHHHC----HHHHHHHHHHHHHHGGGGBHHHHHHH-HHHHHHHHC
T ss_pred EecCCcHHHHhcCCCceEEeCCCCHHHHHHHHHHHHcC----HHHHHHHHHHHHHHHHhCCHHHHHHH-HHHHHHHHH
Confidence 999999999999999999994 799999999999994 88999999999998878888876654 444555544
|
| >2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-34 Score=299.90 Aligned_cols=292 Identities=14% Similarity=0.126 Sum_probs=217.3
Q ss_pred CCCCEEEEeCCCChhHHHHHHHHH-hhCCCcEEEEecCchhhhh-h---h-ccCCC-chH------HHHHHHHHHHHhhh
Q 011969 100 ASPDVFLVQNPPSVPTLVAVKWAS-SLRRSAFIVDWHNFGYTLL-S---L-SLGRR-SHF------VSIYRWIEKYYGKM 166 (474)
Q Consensus 100 ~~~Dvi~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~h~~~~~~~-~---~-~~~~~-~~~------~~~~~~~e~~~~~~ 166 (474)
.+||+||+|++.. ..++.+++ +..++|+|+++|+..+... . . ..+.. ..+ .....++++...+.
T Consensus 128 ~~~Divh~~~~~~---~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (485)
T 2qzs_A 128 WRPDVVHAHDWHA---GLAPAYLAARGRPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYY 204 (485)
T ss_dssp CCCSEEEEETGGG---TTHHHHHHHTTCSSEEEEEESCTTCCCEEEGGGGGTTTCCGGGCSTTTTEETTEEEHHHHHHHH
T ss_pred CCCCEEEeeccch---hHHHHHHhhccCCCCEEEEecCccccCCCCHHHHHhcCCCchhcccccccccccccHHHHHHHh
Confidence 6899999998432 22344444 5678999999999742110 0 0 00000 000 00012456777889
Q ss_pred cCEEEEeCHHHHHHHHHH-hC-------------CceEEEeCCCC-CCCCCCChH----------------HHHHHHHhh
Q 011969 167 ANGCLCVTQAMQHELAQN-WG-------------IKATVLYDQPP-EFFHPTSLE----------------EKHELFCRL 215 (474)
Q Consensus 167 ad~vi~vS~~~~~~l~~~-~~-------------~~~~vi~n~~~-~~f~~~~~~----------------~~~~~~~~l 215 (474)
||.++++|+.+++.+.+. +| .++.+++|+.+ +.|.+.... .+..+++++
T Consensus 205 ad~vi~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 284 (485)
T 2qzs_A 205 ADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQLQIAM 284 (485)
T ss_dssp CSEEEESSHHHHHHTTSHHHHTTCHHHHHHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHHHHHHHH
T ss_pred cCeEEecCHHHHHHHhccccCcchHHHHHhhccCCceEEEecCCCccccCccccccccccccccchhHHHHhHHHHHHHc
Confidence 999999999999988654 34 56899999954 566654321 245566666
Q ss_pred hhccCCCCCccccccccccCCcCcchhhhhcccccccccCC-CCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhcc
Q 011969 216 NKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKP-NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNE 294 (474)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~ 294 (474)
+ +++ ....+++|+|++.+.||++.+++|++.+.+
T Consensus 285 ~-------------------------------------~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~-------- 319 (485)
T 2qzs_A 285 G-------------------------------------LKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLE-------- 319 (485)
T ss_dssp T-------------------------------------CCCCTTSCEEEEEEEESGGGCHHHHHHHHHHHHH--------
T ss_pred C-------------------------------------CCCCCCCeEEEEeccCccccCHHHHHHHHHHHhh--------
Confidence 6 222 123389999999999999999999999866
Q ss_pred CCCchhhHhHhhhcCCccccCCCEEEEEEeCCC--ChHHHHHHHHHcCCCcEE-EecCCCCcccHHHHHhcccEEEeecc
Q 011969 295 DDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP--DKESYEEKIRRLRLKRVA-FRTMWLSAEDYPLLLGSADLGVCLHT 371 (474)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~--~~~~~~~~~~~l~l~~V~-f~g~~v~~~~~~~~l~~adv~v~~~~ 371 (474)
++++|+|+|+|+ ..+.+++.+++++ ++|. |.|. +.+++..+|+.||++|+
T Consensus 320 ---------------------~~~~l~ivG~g~~~~~~~l~~~~~~~~-~~v~~~~g~--~~~~~~~~~~~adv~v~--- 372 (485)
T 2qzs_A 320 ---------------------QGGQLALLGAGDPVLQEGFLAAAAEYP-GQVGVQIGY--HEAFSHRIMGGADVILV--- 372 (485)
T ss_dssp ---------------------TTCEEEEEEEECHHHHHHHHHHHHHST-TTEEEEESC--CHHHHHHHHHHCSEEEE---
T ss_pred ---------------------CCcEEEEEeCCchHHHHHHHHHHHhCC-CcEEEeCCC--CHHHHHHHHHhCCEEEE---
Confidence 479999999997 3577888888887 7887 5554 67778999999999999
Q ss_pred CCCCCCCchHHHHHHhcCCcEEEecccccccccccC---------CcEEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHH
Q 011969 372 SSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVD---------KNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKL 440 (474)
Q Consensus 372 ~s~~e~~p~kv~Eama~G~PVia~~~~~~~e~v~~~---------~~G~l~~--~~~~la~~i~~l~~~~~~~~~~~~~~ 440 (474)
||..|+||++++||||||+|||+++.+++.|++.++ .+|++++ |+++|+++|..+++.+ .|++.+++|
T Consensus 373 pS~~E~~g~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~-~~~~~~~~~ 451 (485)
T 2qzs_A 373 PSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASGFVFEDSNAWSLLRAIRRAFVLW-SRPSLWRFV 451 (485)
T ss_dssp CCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEECSSSHHHHHHHHHHHHHHH-TSHHHHHHH
T ss_pred CCccCCCcHHHHHHHHCCCCEEECCCCCccceeccCccccccccccceEEECCCCHHHHHHHHHHHHHHc-CCHHHHHHH
Confidence 688899999999999999999999999999999988 8999996 7999999999999300 058889999
Q ss_pred HHHHHHhccccchHHHHHHHHHHHHHHHhh
Q 011969 441 RNGTLEMGLSARWATEWEEHAKPLITEVIS 470 (474)
Q Consensus 441 ~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~ 470 (474)
++++++ +.++|+...+++ ..++++++.
T Consensus 452 ~~~~~~--~~fs~~~~~~~~-~~ly~~~~~ 478 (485)
T 2qzs_A 452 QRQAMA--MDFSWQVAAKSY-RELYYRLKL 478 (485)
T ss_dssp HHHHHH--CCCCHHHHHHHH-HHHHHHHC-
T ss_pred HHHHHh--hcCCHHHHHHHH-HHHHHHhhh
Confidence 999975 589998876654 445555543
|
| >1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-34 Score=300.57 Aligned_cols=292 Identities=13% Similarity=0.114 Sum_probs=218.2
Q ss_pred cCCCCEEEEeCCCChhHHHHHHHHHhh--CCCcEEEEecCchhhhh-h---h-ccCCC-chH----HHH--HHHHHHHHh
Q 011969 99 IASPDVFLVQNPPSVPTLVAVKWASSL--RRSAFIVDWHNFGYTLL-S---L-SLGRR-SHF----VSI--YRWIEKYYG 164 (474)
Q Consensus 99 ~~~~Dvi~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~h~~~~~~~-~---~-~~~~~-~~~----~~~--~~~~e~~~~ 164 (474)
..+||+||+|++ .+..++.++++. .++|+|+++|+..+... . . ..+.. ..+ ... ...+++...
T Consensus 128 ~~~~DiIh~~~~---~~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (485)
T 1rzu_A 128 GWRPDMVHAHDW---QAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGL 204 (485)
T ss_dssp SCCCSEEEEEHH---HHTTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHH
T ss_pred CCCCCEEEeccc---chhHHHHHHhhcccCCCCEEEEecCccccCCCCHHHHhhcCCChhhcccccccccccccHHHHHH
Confidence 378999999983 222234455554 78999999999742110 0 0 00000 000 000 014567788
Q ss_pred hhcCEEEEeCHHHHHHHHHH-hC-----------CceEEEeCCCC-CCCCCCChH----------------HHHHHHHhh
Q 011969 165 KMANGCLCVTQAMQHELAQN-WG-----------IKATVLYDQPP-EFFHPTSLE----------------EKHELFCRL 215 (474)
Q Consensus 165 ~~ad~vi~vS~~~~~~l~~~-~~-----------~~~~vi~n~~~-~~f~~~~~~----------------~~~~~~~~l 215 (474)
+.||.++++|+.+++.+.+. +| .++.+++|+.+ +.|.|.... .+..+++++
T Consensus 205 ~~ad~vi~~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 284 (485)
T 1rzu_A 205 QTATALSTVSPSYAEEILTAEFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHF 284 (485)
T ss_dssp HHCSEEEESCHHHHHHTTSHHHHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHH
T ss_pred hhcCEEEecCHhHHHHHhccccCcchHHHHHhhcCCceEEcCCCcccccCCcccccccccccccchhhHHHhHHHHHHhc
Confidence 89999999999999988764 33 35899999944 566654321 245566666
Q ss_pred hhccCCCCCccccccccccCCcCcchhhhhcccccccccCCC-CCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhcc
Q 011969 216 NKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKPN-RPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNE 294 (474)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~ 294 (474)
| ++.+ .+ +++|+|++.+.||++.|++|+..+.+
T Consensus 285 ~-------------------------------------~~~~~~~-~i~~vGrl~~~Kg~~~li~a~~~l~~-------- 318 (485)
T 1rzu_A 285 R-------------------------------------IDDDGSP-LFCVISRLTWQKGIDLMAEAVDEIVS-------- 318 (485)
T ss_dssp T-------------------------------------CCCSSSC-EEEEESCBSTTTTHHHHHTTHHHHHH--------
T ss_pred C-------------------------------------CCCCCCe-EEEEEccCccccCHHHHHHHHHHHHh--------
Confidence 6 2333 34 89999999999999999999999866
Q ss_pred CCCchhhHhHhhhcCCccccCCCEEEEEEeCCCC--hHHHHHHHHHcCCCcEE-EecCCCCcccHHHHHhcccEEEeecc
Q 011969 295 DDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD--KESYEEKIRRLRLKRVA-FRTMWLSAEDYPLLLGSADLGVCLHT 371 (474)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~--~~~~~~~~~~l~l~~V~-f~g~~v~~~~~~~~l~~adv~v~~~~ 371 (474)
++++|+|+|+|+. .+.+++.+++++ ++|. |.|. +.+++..+|+.||++|+
T Consensus 319 ---------------------~~~~l~ivG~g~~~~~~~l~~~~~~~~-~~v~~~~g~--~~~~~~~~~~~adv~v~--- 371 (485)
T 1rzu_A 319 ---------------------LGGRLVVLGAGDVALEGALLAAASRHH-GRVGVAIGY--NEPLSHLMQAGCDAIII--- 371 (485)
T ss_dssp ---------------------TTCEEEEEECBCHHHHHHHHHHHHHTT-TTEEEEESC--CHHHHHHHHHHCSEEEE---
T ss_pred ---------------------cCceEEEEeCCchHHHHHHHHHHHhCC-CcEEEecCC--CHHHHHHHHhcCCEEEE---
Confidence 4799999999973 577888888886 6898 5554 67777999999999999
Q ss_pred CCCCCCCchHHHHHHhcCCcEEEecccccccccccC---------CcEEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHH
Q 011969 372 SSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVD---------KNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKL 440 (474)
Q Consensus 372 ~s~~e~~p~kv~Eama~G~PVia~~~~~~~e~v~~~---------~~G~l~~--~~~~la~~i~~l~~~~~~~~~~~~~~ 440 (474)
||..|+||++++||||||+|||+++.+++.|++.++ .+|++++ |+++|+++|..+++.+ .|++.+++|
T Consensus 372 pS~~E~~~~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~-~~~~~~~~~ 450 (485)
T 1rzu_A 372 PSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYY-HDPKLWTQM 450 (485)
T ss_dssp CCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHH-TCHHHHHHH
T ss_pred CcccCCCCHHHHHHHHCCCCEEEeCCCChhheecccccccccccCCcceEeCCCCHHHHHHHHHHHHHHh-CCHHHHHHH
Confidence 687899999999999999999999999999999988 8999996 7999999999999300 058899999
Q ss_pred HHHHHHhccccchHHHHHHHHHHHHHHHhh
Q 011969 441 RNGTLEMGLSARWATEWEEHAKPLITEVIS 470 (474)
Q Consensus 441 ~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~ 470 (474)
++++++ +.++|+...+++ ..+++++.+
T Consensus 451 ~~~~~~--~~fs~~~~~~~~-~~~y~~~~~ 477 (485)
T 1rzu_A 451 QKLGMK--SDVSWEKSAGLY-AALYSQLIS 477 (485)
T ss_dssp HHHHHT--CCCBHHHHHHHH-HHHHHHHTC
T ss_pred HHHHHH--HhCChHHHHHHH-HHHHHHhhC
Confidence 999975 589998876654 445555543
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-35 Score=301.26 Aligned_cols=356 Identities=15% Similarity=0.147 Sum_probs=239.8
Q ss_pred CCCCceEEEEEeCCCCCCchHHH-HHHHHHhhCCCeEEEEecCCCCCCcceeccCCeEEEEeecCCCCCCCCCchhHHHH
Q 011969 1 MGRRGRACVVVLGDLGRSPRMQY-QALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVL 79 (474)
Q Consensus 1 m~~~~~~~i~~~~~~g~~~r~~~-~a~~l~~~~g~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~ 79 (474)
|+++|++++......||..+... .+..|.++ ||+|+|++............ ++.. .+. ......... ....
T Consensus 38 ~~~mkIl~v~~~~~~GG~~~~~~~l~~~L~~~-G~~v~v~~~~~~~~~~~~~~--~~~~-~~~--~~~~~~~~~--~~~~ 109 (416)
T 2x6q_A 38 LKGRSFVHVNSTSFGGGVAEILHSLVPLLRSI-GIEARWFVIEGPTEFFNVTK--TFHN-ALQ--GNESLKLTE--EMKE 109 (416)
T ss_dssp TTTCEEEEEESCSSSSTHHHHHHHHHHHHHHT-TCEEEEEECCCCHHHHHHHH--HHHH-HHT--TCCSCCCCH--HHHH
T ss_pred hhccEEEEEeCCCCCCCHHHHHHHHHHHHHhC-CCeEEEEEccCCcchhhhhc--ccce-eec--ccccccccH--HHHH
Confidence 55555555544444567666554 56777776 99999999764321100000 0000 000 000000110 1111
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCchHHHHHHHH
Q 011969 80 LLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWI 159 (474)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~ 159 (474)
.+..... .+...+ +..+||+||+|++...... .+++ .+.|+|++.|+... ... ....+.+
T Consensus 110 ~~~~~~~----~~~~~l-~~~~~Dvv~~~~~~~~~~~---~~~~--~~~p~v~~~h~~~~-------~~~---~~~~~~~ 169 (416)
T 2x6q_A 110 LYLNVNR----ENSKFI-DLSSFDYVLVHDPQPAALI---EFYE--KKSPWLWRCHIDLS-------SPN---REFWEFL 169 (416)
T ss_dssp HHHHHHH----HHHHSS-CGGGSSEEEEESSTTGGGG---GGSC--CCSCEEEECCSCCS-------SCC---HHHHHHH
T ss_pred HHHHHHH----HHHHHH-hhcCCCEEEEeccchhhHH---HHHH--hcCCEEEEEccccC-------Ccc---HHHHHHH
Confidence 1111111 111222 3358999999986543221 1222 23899999998721 111 1223344
Q ss_pred HHHHhhhcCEEE-EeCHHHHHHHHHHhCCceEEEeCCCC-CCCCC--CChHHHHHHHHhhhhccCCCCCccccccccccC
Q 011969 160 EKYYGKMANGCL-CVTQAMQHELAQNWGIKATVLYDQPP-EFFHP--TSLEEKHELFCRLNKILHQPLGVQDCVSNAGME 235 (474)
Q Consensus 160 e~~~~~~ad~vi-~vS~~~~~~l~~~~~~~~~vi~n~~~-~~f~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 235 (474)
++.+ +.+|.++ ++|+..++.+. ..++.+++|+.+ ..|.+ .+...+..++++++
T Consensus 170 ~~~~-~~~~~~i~~~s~~~~~~~~---~~~~~vi~ngvd~~~~~~~~~~~~~~~~~r~~~~------------------- 226 (416)
T 2x6q_A 170 RRFV-EKYDRYIFHLPEYVQPELD---RNKAVIMPPSIDPLSEKNVELKQTEILRILERFD------------------- 226 (416)
T ss_dssp HHHH-TTSSEEEESSGGGSCTTSC---TTTEEECCCCBCTTSTTTSCCCHHHHHHHHHHTT-------------------
T ss_pred HHHH-HhCCEEEEechHHHHhhCC---ccceEEeCCCCChhhhcccccChhhHHHHHHHhC-------------------
Confidence 4444 5566655 66665543221 145889999944 44433 23334556666666
Q ss_pred CcCcchhhhhcccccccccCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccC
Q 011969 236 GQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLY 315 (474)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (474)
++++.+ +++|+|++.+.||++.+++|+..+.++ .
T Consensus 227 ------------------~~~~~~-~i~~vGrl~~~Kg~~~li~a~~~l~~~---------------------------~ 260 (416)
T 2x6q_A 227 ------------------VDPEKP-IITQVSRFDPWKGIFDVIEIYRKVKEK---------------------------I 260 (416)
T ss_dssp ------------------CCTTSC-EEEEECCCCTTSCHHHHHHHHHHHHHH---------------------------C
T ss_pred ------------------CCCCCc-EEEEEeccccccCHHHHHHHHHHHHHh---------------------------C
Confidence 223344 899999999999999999999998874 6
Q ss_pred CCEEEEEEeCCCC-----hHHHHHHHHHcCC-CcEEEecC--CCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHh
Q 011969 316 PRLLFIITGKGPD-----KESYEEKIRRLRL-KRVAFRTM--WLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFG 387 (474)
Q Consensus 316 ~~~~l~ivG~g~~-----~~~~~~~~~~l~l-~~V~f~g~--~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama 387 (474)
|+++|+|+|+|+. .+.+++.++++++ ++|.|+|. .++.+++..+|+.||++|+ ||..|++|++++||||
T Consensus 261 ~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~~~~~V~~~G~~~~~~~~~~~~~~~~ad~~v~---ps~~E~~~~~~lEAma 337 (416)
T 2x6q_A 261 PGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAREVNAFQRASDVILQ---MSIREGFGLTVTEAMW 337 (416)
T ss_dssp TTCEEEEEECCCTTCHHHHHHHHHHHHHHTTCTTEEEEEGGGTCCHHHHHHHHHHCSEEEE---CCSSCSSCHHHHHHHH
T ss_pred CCeEEEEEecCcccchhHHHHHHHHHHHhCCCCcEEEecccCCCCHHHHHHHHHhCCEEEE---CCCcCCCccHHHHHHH
Confidence 8999999999975 4567888999998 79999995 1346799999999999999 6878999999999999
Q ss_pred cCCcEEEecccccccccccCCcEEEeCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc-cccchHHHHHHH
Q 011969 388 CGLPVCAVSYSCIEELVKVDKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARWATEWEEH 460 (474)
Q Consensus 388 ~G~PVia~~~~~~~e~v~~~~~G~l~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~~~~ 460 (474)
||+|||+++.++..|++.++.+|++++|+++++++|..++++ ++.++++++++++.+ +.++|+...+++
T Consensus 338 ~G~PvI~~~~~g~~e~i~~~~~g~l~~d~~~la~~i~~ll~~----~~~~~~~~~~a~~~~~~~fs~~~~~~~~ 407 (416)
T 2x6q_A 338 KGKPVIGRAVGGIKFQIVDGETGFLVRDANEAVEVVLYLLKH----PEVSKEMGAKAKERVRKNFIITKHMERY 407 (416)
T ss_dssp TTCCEEEESCHHHHHHCCBTTTEEEESSHHHHHHHHHHHHHC----HHHHHHHHHHHHHHHHHHTBHHHHHHHH
T ss_pred cCCCEEEccCCCChhheecCCCeEEECCHHHHHHHHHHHHhC----HHHHHHHHHHHHHHHHHHcCHHHHHHHH
Confidence 999999999999999999999999999999999999999994 889999999998876 368887765553
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-33 Score=314.57 Aligned_cols=297 Identities=12% Similarity=0.114 Sum_probs=219.9
Q ss_pred CCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCchHHHH-----HHHHHHHHhhhcCEEEEeC
Q 011969 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSI-----YRWIEKYYGKMANGCLCVT 174 (474)
Q Consensus 100 ~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~-----~~~~e~~~~~~ad~vi~vS 174 (474)
.+||+||+|. ..+..++.++++..++|+|++.|+.+.............+... ....|+..++.||.|||+|
T Consensus 406 ~~PDVIHsH~---~~sglva~llar~~gvP~V~T~Hsl~~~k~~~~~~~~~~~~~~y~~~~r~~aE~~~l~~AD~VIa~S 482 (816)
T 3s28_A 406 GKPDLIIGNY---SDGNLVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKLDDKYHFSCQFTADIFAMNHTDFIITST 482 (816)
T ss_dssp SCCSEEEEEH---HHHHHHHHHHHHHHTCCEEEECSCCHHHHSTTTTTTHHHHHHHHCHHHHHHHHHHHHHHSSEEEESC
T ss_pred CCCeEEEeCC---chHHHHHHHHHHHcCCCEEEEEecccccccccccchhhhHHHHHHHHHHHHHHHHHHHhCCEEEECC
Confidence 5799999997 4555567788888899999999998643221110001111111 1234777899999999999
Q ss_pred HHHHHHHHH---HhC---------------------CceEEEeCCCC-CCCCCCChHHH-----HHHHHhhhhccCCCCC
Q 011969 175 QAMQHELAQ---NWG---------------------IKATVLYDQPP-EFFHPTSLEEK-----HELFCRLNKILHQPLG 224 (474)
Q Consensus 175 ~~~~~~l~~---~~~---------------------~~~~vi~n~~~-~~f~~~~~~~~-----~~~~~~l~~~~~~~~~ 224 (474)
+..++.+.+ .++ .++.+|+||.+ +.|.|...... .......-
T Consensus 483 ~~~~~~l~~~~~~y~~~~~~~~p~Lyr~~~gI~~~~~ki~VIpnGVD~~~F~P~~~~~~Rl~~~~~~i~~~l-------- 554 (816)
T 3s28_A 483 FQEIAGSKETVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELL-------- 554 (816)
T ss_dssp HHHHHCCSSSCCTTGGGSSEEETTTEEEEESCCTTCTTEEECCCCCCTTTSCCTTCTTTCCGGGHHHHHHHH--------
T ss_pred HHHHHHHHHHHHHhhhhhccccchhhhcccccccCCCCEEEECCCcCHHHcCccchhhhhhhhccccccccc--------
Confidence 998874221 111 17899999954 67766542111 00000000
Q ss_pred ccccccccccCCcCcchhhhhcc-ccccccc--CCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhh
Q 011969 225 VQDCVSNAGMEGQKADETIFTSL-AGIDVFL--KPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEE 301 (474)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~ 301 (474)
|... ......+ .++.+ +++|+|++.+.||++.+++|+..+.++
T Consensus 555 -------------------~~p~~~r~~lg~l~~~~~~-vIl~vGRl~~~KGid~LIeA~~~L~~~-------------- 600 (816)
T 3s28_A 555 -------------------YSDVENKEHLCVLKDKKKP-ILFTMARLDRVKNLSGLVEWYGKNTRL-------------- 600 (816)
T ss_dssp -------------------HCSCCBTTEESCBSCTTSC-EEEEECCCCTTTTHHHHHHHHHHCHHH--------------
T ss_pred -------------------cchhhHHHHhcccCCCCCe-EEEEEccCcccCCHHHHHHHHHHHHhh--------------
Confidence 0000 0000001 23344 899999999999999999999999773
Q ss_pred HhHhhhcCCccccCCCEEEEEEeCCC-----------ChHHHHHHHHHcCC-CcEEEecC---CCCcccHHHHHh-cccE
Q 011969 302 VFLKEISDGKQYLYPRLLFIITGKGP-----------DKESYEEKIRRLRL-KRVAFRTM---WLSAEDYPLLLG-SADL 365 (474)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~l~ivG~g~-----------~~~~~~~~~~~l~l-~~V~f~g~---~v~~~~~~~~l~-~adv 365 (474)
.++++|+|+|+|+ ..+++++.++++++ ++|.|+|. +++.+++..+|. .||+
T Consensus 601 -------------~~~v~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~flG~~~~~v~~~eL~~~~~~aaDv 667 (816)
T 3s28_A 601 -------------RELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYICDTKGA 667 (816)
T ss_dssp -------------HHHCEEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEECCCCCHHHHHHHHHHHHHTTCE
T ss_pred -------------CCCeEEEEEeCCCcccccchhhHHHHHHHHHHHHHcCCCCcEEEccCccccCCHHHHHHHHHhcCeE
Confidence 5789999999998 45778899999999 79999994 145588999998 6899
Q ss_pred EEeeccCCCCCCCchHHHHHHhcCCcEEEecccccccccccCCcEEEeC--CHHHHHHHHHHHH----hCCCCCHHHHHH
Q 011969 366 GVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFS--SSSELADQLLMLF----KGFPDDSDVLKK 439 (474)
Q Consensus 366 ~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~~~~e~v~~~~~G~l~~--~~~~la~~i~~l~----~~~~~~~~~~~~ 439 (474)
+|+ ||..|+||++++||||||+|||+++.+++.|++.++.+|++++ |+++++++|..++ . |++.+++
T Consensus 668 fV~---PS~~EgfglvllEAMA~G~PVIasd~GG~~EiV~dg~~Gllv~p~D~e~LA~aI~~lL~~Ll~----d~~~~~~ 740 (816)
T 3s28_A 668 FVQ---PALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVHGKSGFHIDPYHGDQAADTLADFFTKCKE----DPSHWDE 740 (816)
T ss_dssp EEE---CCSCBSSCHHHHHHHHTTCCEEEESSBTHHHHCCBTTTBEEECTTSHHHHHHHHHHHHHHHHH----CTHHHHH
T ss_pred EEE---CCCccCccHHHHHHHHcCCCEEEeCCCChHHHHccCCcEEEeCCCCHHHHHHHHHHHHHHhcc----CHHHHHH
Confidence 999 6888999999999999999999999999999999999999997 7999999998776 5 5889999
Q ss_pred HHHHHHHhc-cccchHHHHHHHH
Q 011969 440 LRNGTLEMG-LSARWATEWEEHA 461 (474)
Q Consensus 440 ~~~~~~~~~-~~~~w~~~~~~~~ 461 (474)
|++++++.+ +.++|+...+++.
T Consensus 741 m~~~ar~~a~~~fSwe~~a~~ll 763 (816)
T 3s28_A 741 ISKGGLQRIEEKYTWQIYSQRLL 763 (816)
T ss_dssp HHHHHHHHHHHSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHH
Confidence 999999977 7899987665543
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-32 Score=273.31 Aligned_cols=293 Identities=17% Similarity=0.099 Sum_probs=217.9
Q ss_pred CCCCchHH-HHHHHHHhhCCCeEEEEecCCCCCCcceeccCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHHHHHH
Q 011969 15 LGRSPRMQ-YQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLW 93 (474)
Q Consensus 15 ~g~~~r~~-~~a~~l~~~~g~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (474)
.||..+.. ..+..|.++ ||+|++++....... .+++++++.+ . ...+.+.+.
T Consensus 29 ~gG~~~~~~~l~~~L~~~-G~~v~v~~~~~~~~~-----~~~~~~~~~~----------~----~~~l~~~l~------- 81 (342)
T 2iuy_A 29 YGGIQWVVANLMDGLLEL-GHEVFLLGAPGSPAG-----RPGLTVVPAG----------E----PEEIERWLR------- 81 (342)
T ss_dssp SCHHHHHHHHHHHHHHHT-TCEEEEESCTTSCCC-----STTEEECSCC----------S----HHHHHHHHH-------
T ss_pred CChHHHHHHHHHHHHHHc-CCeEEEEecCCCCCC-----CCcceeccCC----------c----HHHHHHHHH-------
Confidence 46555544 456777776 999999997754322 2355543221 1 011222221
Q ss_pred HHhhhcCCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhhhcCEEEEe
Q 011969 94 FLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCV 173 (474)
Q Consensus 94 ~~~~~~~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~v 173 (474)
+ .+||+||++++..... +++..+.| |+++|+... ... .+|.++++
T Consensus 82 ----~-~~~Dvi~~~~~~~~~~------~~~~~~~p-v~~~h~~~~-------~~~----------------~~d~ii~~ 126 (342)
T 2iuy_A 82 ----T-ADVDVVHDHSGGVIGP------AGLPPGTA-FISSHHFTT-------RPV----------------NPVGCTYS 126 (342)
T ss_dssp ----H-CCCSEEEECSSSSSCS------TTCCTTCE-EEEEECSSS-------BCS----------------CCTTEEES
T ss_pred ----h-cCCCEEEECCchhhHH------HHhhcCCC-EEEecCCCC-------Ccc----------------cceEEEEc
Confidence 2 7999999998653221 14567899 999999842 111 19999999
Q ss_pred CHHHHHHHHHHhCCceEEEeCCCC-CCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhccccccc
Q 011969 174 TQAMQHELAQNWGIKATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDV 252 (474)
Q Consensus 174 S~~~~~~l~~~~~~~~~vi~n~~~-~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (474)
|+.+++.+.+ ..++.+++|+.+ +.|.+...
T Consensus 127 S~~~~~~~~~--~~~~~vi~ngvd~~~~~~~~~----------------------------------------------- 157 (342)
T 2iuy_A 127 SRAQRAHCGG--GDDAPVIPIPVDPARYRSAAD----------------------------------------------- 157 (342)
T ss_dssp CHHHHHHTTC--CTTSCBCCCCBCGGGSCCSTT-----------------------------------------------
T ss_pred CHHHHHHHhc--CCceEEEcCCCChhhcCcccc-----------------------------------------------
Confidence 9999988876 566889999854 44443310
Q ss_pred ccCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCChHHH
Q 011969 253 FLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESY 332 (474)
Q Consensus 253 ~~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~~ 332 (474)
..++.+ .++|+|++.+.||++.+++|++.+ +++|+|+|+|+..+++
T Consensus 158 -~~~~~~-~i~~vG~~~~~Kg~~~li~a~~~~--------------------------------~~~l~i~G~g~~~~~l 203 (342)
T 2iuy_A 158 -QVAKED-FLLFMGRVSPHKGALEAAAFAHAC--------------------------------GRRLVLAGPAWEPEYF 203 (342)
T ss_dssp -CCCCCS-CEEEESCCCGGGTHHHHHHHHHHH--------------------------------TCCEEEESCCCCHHHH
T ss_pred -cCCCCC-EEEEEeccccccCHHHHHHHHHhc--------------------------------CcEEEEEeCcccHHHH
Confidence 012233 789999999999999999999874 4789999999999999
Q ss_pred HHHHHHcCCCcEEEecCCCCcccHHHHHhcccEEEeeccCCC----------CCCCchHHHHHHhcCCcEEEeccccccc
Q 011969 333 EEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS----------GLDLPMKVVDMFGCGLPVCAVSYSCIEE 402 (474)
Q Consensus 333 ~~~~~~l~l~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~----------~e~~p~kv~Eama~G~PVia~~~~~~~e 402 (474)
++.+++++ ++|.|+|. ++.+++..+|+.||++|+ ||. .|++|++++|||+||+|||+++.++..|
T Consensus 204 ~~~~~~~~-~~v~~~g~-~~~~~l~~~~~~adv~v~---ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~~~~e 278 (342)
T 2iuy_A 204 DEITRRYG-STVEPIGE-VGGERRLDLLASAHAVLA---MSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGCLAE 278 (342)
T ss_dssp HHHHHHHT-TTEEECCC-CCHHHHHHHHHHCSEEEE---CCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTTTHHH
T ss_pred HHHHHHhC-CCEEEecc-CCHHHHHHHHHhCCEEEE---CCcccccccccccccCccHHHHHHHhcCCCEEEcCCCChHH
Confidence 99999988 89999998 999999999999999999 565 7999999999999999999999999999
Q ss_pred cccc--CCcEEEeC-CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHh
Q 011969 403 LVKV--DKNGLLFS-SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEVI 469 (474)
Q Consensus 403 ~v~~--~~~G~l~~-~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 469 (474)
++.+ +.+|++++ |+++++++|..+++ .++.++.+. +.++|+...++ ...+++++.
T Consensus 279 ~~~~~~~~~g~~~~~d~~~l~~~i~~l~~--------~~~~~~~~~---~~~s~~~~~~~-~~~~~~~~~ 336 (342)
T 2iuy_A 279 IVPSVGEVVGYGTDFAPDEARRTLAGLPA--------SDEVRRAAV---RLWGHVTIAER-YVEQYRRLL 336 (342)
T ss_dssp HGGGGEEECCSSSCCCHHHHHHHHHTSCC--------HHHHHHHHH---HHHBHHHHHHH-HHHHHHHHH
T ss_pred HhcccCCCceEEcCCCHHHHHHHHHHHHH--------HHHHHHHHH---HhcCHHHHHHH-HHHHHHHHH
Confidence 9999 89999998 89999999998865 233333333 36788776655 344445444
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-31 Score=275.45 Aligned_cols=269 Identities=13% Similarity=0.193 Sum_probs=208.9
Q ss_pred CCCCEEEEeCCCChhHHHHHHHHHhhCC----CcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhhhcC--EEEEe
Q 011969 100 ASPDVFLVQNPPSVPTLVAVKWASSLRR----SAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMAN--GCLCV 173 (474)
Q Consensus 100 ~~~Dvi~~~~~~~~~~~~~~~~~~~~~~----~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad--~vi~v 173 (474)
.+||+||++++ ... .+.++..+.+ .+++..+|... ...... .+.+.+.+| .++++
T Consensus 80 ~~~Div~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~--------~~~~~~~~~~~~ii~~ 140 (413)
T 3oy2_A 80 HKPDIVMIYND---PIV-IGNYLLAMGKCSHRTKIVLYVDLVS-------KNIREN--------LWWIFSHPKVVGVMAM 140 (413)
T ss_dssp HCCSEEEEEEC---HHH-HHHHHHHGGGCCSCCEEEEEECCCS-------BSCCGG--------GGGGGGCTTEEEEEES
T ss_pred cCCCEEEEcch---HHH-HHHHHHHhccCCCCCceeeeccccc-------hhhHHH--------HHHHHhccCCceEEEc
Confidence 68999999963 222 2334444443 45566777652 111111 245667888 99999
Q ss_pred CHHHHHHHHHHhC--CceEEEeCCCC-CCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhccccc
Q 011969 174 TQAMQHELAQNWG--IKATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGI 250 (474)
Q Consensus 174 S~~~~~~l~~~~~--~~~~vi~n~~~-~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (474)
|+.+++.+.+ ++ .++.+++|+.+ +.| . ..+++++
T Consensus 141 S~~~~~~~~~-~~~~~~~~vi~ngvd~~~~--~------~~~~~~~---------------------------------- 177 (413)
T 3oy2_A 141 SKCWISDICN-YGCKVPINIVSHFVDTKTI--Y------DARKLVG---------------------------------- 177 (413)
T ss_dssp STHHHHHHHH-TTCCSCEEECCCCCCCCCC--T------THHHHTT----------------------------------
T ss_pred CHHHHHHHHH-cCCCCceEEeCCCCCHHHH--H------HHHHhcC----------------------------------
Confidence 9999999988 55 35999999954 444 1 1223333
Q ss_pred ccccCC-CCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCCh
Q 011969 251 DVFLKP-NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK 329 (474)
Q Consensus 251 ~~~~~~-~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~ 329 (474)
+++ ....+++|+|++.+.||++.+++|+..+.++ .|+++|+|+|+|+..
T Consensus 178 ---~~~~~~~~~il~vGr~~~~Kg~~~li~a~~~l~~~---------------------------~~~~~l~ivG~g~~~ 227 (413)
T 3oy2_A 178 ---LSEYNDDVLFLNMNRNTARKRLDIYVLAAARFISK---------------------------YPDAKVRFLCNSHHE 227 (413)
T ss_dssp ---CGGGTTSEEEECCSCSSGGGTHHHHHHHHHHHHHH---------------------------CTTCCEEEEEECCTT
T ss_pred ---CCcccCceEEEEcCCCchhcCcHHHHHHHHHHHHh---------------------------CCCcEEEEEeCCccc
Confidence 111 1334899999999999999999999998774 789999999999865
Q ss_pred ------HHHHHHHHHcCCC-c-------EEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEe
Q 011969 330 ------ESYEEKIRRLRLK-R-------VAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV 395 (474)
Q Consensus 330 ------~~~~~~~~~l~l~-~-------V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~ 395 (474)
+.+++.+++++++ + |.|.|. ++.+++..+|+.||++|+ ||..|+||++++||||||+|||++
T Consensus 228 ~~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g~-~~~~~~~~~~~~adv~v~---pS~~E~~~~~~lEAma~G~PvI~s 303 (413)
T 3oy2_A 228 SKFDLHSIALRELVASGVDNVFTHLNKIMINRTV-LTDERVDMMYNACDVIVN---CSSGEGFGLCSAEGAVLGKPLIIS 303 (413)
T ss_dssp CSCCHHHHHHHHHHHHTCSCHHHHHTTEEEECSC-CCHHHHHHHHHHCSEEEE---CCSCCSSCHHHHHHHTTTCCEEEE
T ss_pred chhhHHHHHHHHHHHcCcccccccccceeeccCc-CCHHHHHHHHHhCCEEEe---CCCcCCCCcHHHHHHHcCCCEEEc
Confidence 8889999999994 4 777776 999999999999999999 688999999999999999999999
Q ss_pred cccccccccccCCc---------------EE--EeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc-cccchHH
Q 011969 396 SYSCIEELVKVDKN---------------GL--LFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARWAT 455 (474)
Q Consensus 396 ~~~~~~e~v~~~~~---------------G~--l~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~ 455 (474)
+.++..|++.++.+ |+ +++ |+++++++| .++++ ++.++++++++++.+ +.++|+.
T Consensus 304 ~~~g~~e~v~~~~~~~i~~~~~~~~~~~~G~~gl~~~~d~~~la~~i-~l~~~----~~~~~~~~~~a~~~~~~~fs~~~ 378 (413)
T 3oy2_A 304 AVGGADDYFSGDCVYKIKPSAWISVDDRDGIGGIEGIIDVDDLVEAF-TFFKD----EKNRKEYGKRVQDFVKTKPTWDD 378 (413)
T ss_dssp CCHHHHHHSCTTTSEEECCCEEEECTTTCSSCCEEEECCHHHHHHHH-HHTTS----HHHHHHHHHHHHHHHTTSCCHHH
T ss_pred CCCChHHHHccCcccccccccccccccccCcceeeCCCCHHHHHHHH-HHhcC----HHHHHHHHHHHHHHHHHhCCHHH
Confidence 99999999988877 88 875 899999999 99984 899999999999976 5789987
Q ss_pred HHHHHHHHHHHHHhh
Q 011969 456 EWEEHAKPLITEVIS 470 (474)
Q Consensus 456 ~~~~~~~~~~~~~~~ 470 (474)
..++ ...+++++..
T Consensus 379 ~~~~-~~~~~~~~~~ 392 (413)
T 3oy2_A 379 ISSD-IIDFFNSLLR 392 (413)
T ss_dssp HHHH-HHHHHHHHTC
T ss_pred HHHH-HHHHHHHHHh
Confidence 6655 4455555543
|
| >3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-29 Score=272.42 Aligned_cols=291 Identities=14% Similarity=0.085 Sum_probs=206.3
Q ss_pred CCCCEEEEeCCCChhHHHHHHHHHh-------hCCCcEEEEecCchhhh------hhhccCCCchHHHH-----------
Q 011969 100 ASPDVFLVQNPPSVPTLVAVKWASS-------LRRSAFIVDWHNFGYTL------LSLSLGRRSHFVSI----------- 155 (474)
Q Consensus 100 ~~~Dvi~~~~~~~~~~~~~~~~~~~-------~~~~~~i~~~h~~~~~~------~~~~~~~~~~~~~~----------- 155 (474)
..+||+|+|.. .+.++..+++. +.++|+|+|+|+..+.- ..............
T Consensus 152 ~~ddIiH~hDW---~t~l~~~~l~~~~~~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (536)
T 3vue_A 152 GEDVVFVCNDW---HTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVE 228 (536)
T ss_dssp CSCEEEEEESG---GGSTHHHHHHHHTTTTTSSTTCEEEEEESCTTCCCEEEGGGGGGGCCCGGGHHHHEEEETTTSTTC
T ss_pred CCCEEEEECcc---hHHHHHHHHHHhhhhhhhhcccceeeeecCcccccccchhhhhhcCCchhhcchhhhhhccccccc
Confidence 45788889984 33333333332 24789999999874211 00000000100000
Q ss_pred --HHHHHHHHhhhcCEEEEeCHHHHHHHHHHhC-----------CceEEEeCCC-CCCCCCCCh----------------
Q 011969 156 --YRWIEKYYGKMANGCLCVTQAMQHELAQNWG-----------IKATVLYDQP-PEFFHPTSL---------------- 205 (474)
Q Consensus 156 --~~~~e~~~~~~ad~vi~vS~~~~~~l~~~~~-----------~~~~vi~n~~-~~~f~~~~~---------------- 205 (474)
.-.+++.....||.|++||+..++++.+.++ .++.+|+||. .+.|.|...
T Consensus 229 ~~~~n~~k~~i~~ad~v~tVS~~~a~ei~~~~~~g~~l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~~~~~~K 308 (536)
T 3vue_A 229 GRKINWMKAGILEADRVLTVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAK 308 (536)
T ss_dssp EEEEEHHHHHHHHCSEEEESCHHHHHHHHTTCCCCSSSCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTTTHHHHH
T ss_pred ccchhHHHHHHHhccEEEEcCHHHhhhhhcccccccccccccccCCeEEEECCcchhhcCCCCccccccccchhhhhhhh
Confidence 0024566778999999999999999877543 2489999994 467766421
Q ss_pred -HHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhcccccccccCCCCCeEEEEEeecccCCCHHHHHHHHHHh
Q 011969 206 -EEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMY 284 (474)
Q Consensus 206 -~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l 284 (474)
..+..+.+++|+ ...++.| +|+|+||+.++||++.|++|+..+
T Consensus 309 ~~~k~~l~~~~gl-----------------------------------~~d~~~p-~i~~vgRl~~~Kg~~~li~a~~~l 352 (536)
T 3vue_A 309 ALNKEALQAEAGL-----------------------------------PVDRKIP-LIAFIGRLEEQKGPDVMAAAIPEL 352 (536)
T ss_dssp HHHHHHHHHHTTS-----------------------------------CCCTTSC-EEEEECCBSGGGCHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCC-----------------------------------CCCCCCc-EEEEEeeccccCChHHHHHHHHHh
Confidence 123334445552 1234566 899999999999999999999988
Q ss_pred HHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCCh--HHHHHHHHHcCCCcEEEecCCCCcccHHHHHhc
Q 011969 285 DRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK--ESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGS 362 (474)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~--~~~~~~~~~l~l~~V~f~g~~v~~~~~~~~l~~ 362 (474)
.+ ++.+|+|+|.|+.. ..++..+..++ .+|.+.+. .+.+++..+|+.
T Consensus 353 ~~-----------------------------~~~~l~l~G~G~~~~~~~~~~~~~~~~-~~v~~~~~-~~~~~~~~~~~~ 401 (536)
T 3vue_A 353 MQ-----------------------------EDVQIVLLGTGKKKFEKLLKSMEEKYP-GKVRAVVK-FNAPLAHLIMAG 401 (536)
T ss_dssp TT-----------------------------SSCEEEEECCBCHHHHHHHHHHHHHST-TTEEEECS-CCHHHHHHHHHH
T ss_pred Hh-----------------------------hCCeEEEEeccCchHHHHHHHHHhhcC-CceEEEEe-ccHHHHHHHHHh
Confidence 55 45778888887654 33444444443 58999988 899999999999
Q ss_pred ccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecccccccccccCCcEEE----------eC--CHHHHHHHHHHHHhCC
Q 011969 363 ADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLL----------FS--SSSELADQLLMLFKGF 430 (474)
Q Consensus 363 adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~~~~e~v~~~~~G~l----------~~--~~~~la~~i~~l~~~~ 430 (474)
||++|+ ||..|+||++++|||+||+|||+++.||+.|+|.++.+|+. ++ |+++|+++|.++++.+
T Consensus 402 aD~~v~---PS~~E~fgl~~lEAma~G~PvI~s~~gG~~e~V~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~~~ 478 (536)
T 3vue_A 402 ADVLAV---PSRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIKVV 478 (536)
T ss_dssp CSEEEE---CCSCCSSCSHHHHHHHTTCCEEECSCTHHHHHCCBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHHHT
T ss_pred hheeec---ccccCCCCHHHHHHHHcCCCEEEcCCCCchheeeCCCCccccccCCCceeEECCCCHHHHHHHHHHHHHhc
Confidence 999999 78899999999999999999999999999999999999994 43 5889999999988743
Q ss_pred CCCHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHH
Q 011969 431 PDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEV 468 (474)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 468 (474)
. .+.++++++++.+ +.++|+...++. ..+++++
T Consensus 479 ~--~~~~~~~~~~am~--~~fSW~~~A~~y-~~ly~~L 511 (536)
T 3vue_A 479 G--TPAYEEMVRNCMN--QDLSWKGPAKNW-ENVLLGL 511 (536)
T ss_dssp T--SHHHHHHHHHHHH--SCCSSHHHHHHH-HHHHHTT
T ss_pred C--cHHHHHHHHHHHH--hcCCHHHHHHHH-HHHHHHh
Confidence 2 3457778888755 479998877664 4455544
|
| >1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.3e-28 Score=246.63 Aligned_cols=328 Identities=16% Similarity=0.121 Sum_probs=220.3
Q ss_pred ceEEEEEeCCCCCCc-hHHHHHHHHHhhCCCeEEEEecCCCCCCcceeccCCeEEEEeecCCCCCCCCCchhHHHHHHHH
Q 011969 5 GRACVVVLGDLGRSP-RMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLK 83 (474)
Q Consensus 5 ~~~~i~~~~~~g~~~-r~~~~a~~l~~~~g~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (474)
++++++..+ .||.. +....+..|.++ ||+|++++..... ........|++++.++.... ... .....+.....
T Consensus 7 mkIl~~~~~-~gG~~~~~~~la~~L~~~-G~~V~v~~~~~~~-~~~~~~~~g~~~~~~~~~~~--~~~-~~~~~~~~~~~ 80 (364)
T 1f0k_A 7 KRLMVMAGG-TGGHVFPGLAVAHHLMAQ-GWQVRWLGTADRM-EADLVPKHGIEIDFIRISGL--RGK-GIKALIAAPLR 80 (364)
T ss_dssp CEEEEECCS-SHHHHHHHHHHHHHHHTT-TCEEEEEECTTST-HHHHGGGGTCEEEECCCCCC--TTC-CHHHHHTCHHH
T ss_pred cEEEEEeCC-CccchhHHHHHHHHHHHc-CCEEEEEecCCcc-hhhhccccCCceEEecCCcc--CcC-ccHHHHHHHHH
Confidence 466666533 44332 234567778886 9999999976532 11233445888888872211 111 10111111111
Q ss_pred HHHHHHHHHHHHhhhcCCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHH
Q 011969 84 PLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYY 163 (474)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 163 (474)
.+.... -+...+. ..+||+||++.+.. .. .+.++++..++|+|++.|+... + ..++.+
T Consensus 81 ~~~~~~-~l~~~l~-~~~pDvv~~~~~~~--~~-~~~~~~~~~~~p~v~~~~~~~~-------~----------~~~~~~ 138 (364)
T 1f0k_A 81 IFNAWR-QARAIMK-AYKPDVVLGMGGYV--SG-PGGLAAWSLGIPVVLHEQNGIA-------G----------LTNKWL 138 (364)
T ss_dssp HHHHHH-HHHHHHH-HHCCSEEEECSSTT--HH-HHHHHHHHTTCCEEEEECSSSC-------C----------HHHHHH
T ss_pred HHHHHH-HHHHHHH-hcCCCEEEEeCCcC--ch-HHHHHHHHcCCCEEEEecCCCC-------c----------HHHHHH
Confidence 111111 1112222 26899999997532 22 2445666788999999998621 1 234566
Q ss_pred hhhcCEEEEeCHHHHHHHHHHhCCceEEEeCCCC-CCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchh
Q 011969 164 GKMANGCLCVTQAMQHELAQNWGIKATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADET 242 (474)
Q Consensus 164 ~~~ad~vi~vS~~~~~~l~~~~~~~~~vi~n~~~-~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (474)
.+.+|.+++.++.. ++ ++.+++|+.. +.|.+.. . +.+++
T Consensus 139 ~~~~d~v~~~~~~~-------~~-~~~~i~n~v~~~~~~~~~--~----~~~~~-------------------------- 178 (364)
T 1f0k_A 139 AKIATKVMQAFPGA-------FP-NAEVVGNPVRTDVLALPL--P----QQRLA-------------------------- 178 (364)
T ss_dssp TTTCSEEEESSTTS-------SS-SCEECCCCCCHHHHTSCC--H----HHHHT--------------------------
T ss_pred HHhCCEEEecChhh-------cC-CceEeCCccchhhcccch--h----hhhcc--------------------------
Confidence 78899999988754 23 5678888744 3333321 1 12222
Q ss_pred hhhcccccccccCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEE-EE
Q 011969 243 IFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLL-FI 321 (474)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~ 321 (474)
+.++.+.+++++|++.+.|+.+.+++|+..+.+ +++ ++
T Consensus 179 -----------~~~~~~~il~~~g~~~~~k~~~~li~a~~~l~~------------------------------~~~~l~ 217 (364)
T 1f0k_A 179 -----------GREGPVRVLVVGGSQGARILNQTMPQVAAKLGD------------------------------SVTIWH 217 (364)
T ss_dssp -----------TCCSSEEEEEECTTTCCHHHHHHHHHHHHHHGG------------------------------GEEEEE
T ss_pred -----------cCCCCcEEEEEcCchHhHHHHHHHHHHHHHhcC------------------------------CcEEEE
Confidence 234455567777899999999999999988621 577 57
Q ss_pred EEeCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecccccc
Q 011969 322 ITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIE 401 (474)
Q Consensus 322 ivG~g~~~~~~~~~~~~l~l~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~~~~ 401 (474)
++|+|+ .+++++.++++++++|.|.|. + +++..+|+.||++|+| | + |++++|||+||+|||+++.++..
T Consensus 218 i~G~~~-~~~l~~~~~~~~~~~v~~~g~-~--~~~~~~~~~ad~~v~~---s-g---~~~~~EAma~G~Pvi~~~~~g~~ 286 (364)
T 1f0k_A 218 QSGKGS-QQSVEQAYAEAGQPQHKVTEF-I--DDMAAAYAWADVVVCR---S-G---ALTVSEIAAAGLPALFVPFQHKD 286 (364)
T ss_dssp ECCTTC-HHHHHHHHHHTTCTTSEEESC-C--SCHHHHHHHCSEEEEC---C-C---HHHHHHHHHHTCCEEECCCCCTT
T ss_pred EcCCch-HHHHHHHHhhcCCCceEEecc-h--hhHHHHHHhCCEEEEC---C-c---hHHHHHHHHhCCCEEEeeCCCCc
Confidence 789887 577888899998888999998 4 8999999999999994 4 2 89999999999999999988764
Q ss_pred --------cccccCCcEEEeC--C--HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHH
Q 011969 402 --------ELVKVDKNGLLFS--S--SSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEE 459 (474)
Q Consensus 402 --------e~v~~~~~G~l~~--~--~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~ 459 (474)
+++ +++.|++++ | +++++++|..+ + ++.+++|++++++....++|+...+.
T Consensus 287 ~~q~~~~~~~~-~~g~g~~~~~~d~~~~~la~~i~~l--~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (364)
T 1f0k_A 287 RQQYWNALPLE-KAGAAKIIEQPQLSVDAVANTLAGW--S----RETLLTMAERARAASIPDATERVANE 349 (364)
T ss_dssp CHHHHHHHHHH-HTTSEEECCGGGCCHHHHHHHHHTC--C----HHHHHHHHHHHHHTCCTTHHHHHHHH
T ss_pred hhHHHHHHHHH-hCCcEEEeccccCCHHHHHHHHHhc--C----HHHHHHHHHHHHHhhccCHHHHHHHH
Confidence 455 445699996 4 89999999988 3 88999999999998777777665544
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-29 Score=263.64 Aligned_cols=263 Identities=14% Similarity=0.135 Sum_probs=183.2
Q ss_pred CCCCEEEEeCCCChhHHHHHHHHH----h---hCCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhhhcC--EE
Q 011969 100 ASPDVFLVQNPPSVPTLVAVKWAS----S---LRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMAN--GC 170 (474)
Q Consensus 100 ~~~Dvi~~~~~~~~~~~~~~~~~~----~---~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad--~v 170 (474)
.++|+||++. ..+...+..+. . ..+.++++.+|+++.. +..... .+.+.+..++.++ .+
T Consensus 131 ~~~Dvv~a~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-----~~~~~~----~~~~~~~~~~~~~~~~v 198 (413)
T 2x0d_A 131 AKHDIFIATA---WWTAYAAQRIVSWQSDTYGIPPNKILYIIQDFEPG-----FYQWSS----QYVLAESTYKYRGPQIA 198 (413)
T ss_dssp CTTEEEEECS---HHHHHHHHHHHHHHHHHHTCCCCCEEEEECSCGGG-----GSCSSH----HHHHHHHTTSCCSCEEE
T ss_pred CCCCEEEEeh---HHHHHHHHHhhhhhhhhcccccCcEEEEEeechhh-----cCccCh----HHHHHHHHhccCCceEE
Confidence 5799999987 44443333221 1 2356788888887421 111111 1234555566655 58
Q ss_pred EEeCHHHHHHHHHH-hC-CceEEEeCCCC-CCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhcc
Q 011969 171 LCVTQAMQHELAQN-WG-IKATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSL 247 (474)
Q Consensus 171 i~vS~~~~~~l~~~-~~-~~~~vi~n~~~-~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (474)
+++|+.+++.+.+. ++ .++.+++++.+ +.|.+..
T Consensus 199 i~~S~~~~~~l~~~g~~~~~~~~i~~g~d~~~~~~~~------------------------------------------- 235 (413)
T 2x0d_A 199 VFNSELLKQYFNNKGYNFTDEYFFQPKINTTLKNYIN------------------------------------------- 235 (413)
T ss_dssp EEESHHHHHHHHHHTCCCSEEEEECCCCCHHHHTTTT-------------------------------------------
T ss_pred EEcCHHHHHHHHHcCCCCCceEEeCCCcCchhhcccc-------------------------------------------
Confidence 99999999999875 22 23677777643 2221110
Q ss_pred cccccccCCCCCeEEEEEeec-ccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCC---EEEEEE
Q 011969 248 AGIDVFLKPNRPALVVSSTSW-TPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPR---LLFIIT 323 (474)
Q Consensus 248 ~~~~~~~~~~~~~~i~~~G~l-~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~l~iv 323 (474)
...++.+ .++++|++ .+.||++.|++|+..+.++ .|+ ++|+|+
T Consensus 236 -----~~~~~~~-~il~~gr~~~~~Kg~~~li~A~~~l~~~---------------------------~~~~~~~~l~iv 282 (413)
T 2x0d_A 236 -----DKRQKEK-IILVYGRPSVKRNAFTLIVEALKIFVQK---------------------------YDRSNEWKIISV 282 (413)
T ss_dssp -----SCCCCCS-EEEEEECTTCGGGCHHHHHHHHHHHHHH---------------------------CTTGGGCEEEEE
T ss_pred -----cccCCCC-EEEEEecCchhccCHHHHHHHHHHHHHh---------------------------CCCCCceEEEEE
Confidence 0112223 67888996 6889999999999998763 454 899999
Q ss_pred eCCCChHHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEeccccccc
Q 011969 324 GKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEE 402 (474)
Q Consensus 324 G~g~~~~~~~~~~~~l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~~~~e 402 (474)
|+|+.. .++++ ++|.|+|. ++.+++..+|+.||++|+ +|..|+||++++||||||+|||+++ ++..|
T Consensus 283 G~~~~~-------~~l~~~~~v~f~G~-~~~~~l~~~~~~adv~v~---pS~~E~~g~~~lEAmA~G~PVV~~~-~g~~e 350 (413)
T 2x0d_A 283 GEKHKD-------IALGKGIHLNSLGK-LTLEDYADLLKRSSIGIS---LMISPHPSYPPLEMAHFGLRVITNK-YENKD 350 (413)
T ss_dssp ESCCCC-------EEEETTEEEEEEES-CCHHHHHHHHHHCCEEEC---CCSSSSCCSHHHHHHHTTCEEEEEC-BTTBC
T ss_pred cCCchh-------hhcCCcCcEEEcCC-CCHHHHHHHHHhCCEEEE---ecCCCCCCcHHHHHHhCCCcEEEeC-CCcch
Confidence 998764 24566 68999998 999999999999999999 6878999999999999999999954 56789
Q ss_pred ccccCCcEEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHhhc
Q 011969 403 LVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEVISQ 471 (474)
Q Consensus 403 ~v~~~~~G~l~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~ 471 (474)
++.++.+|++++ |+++|+++|..++++ ++.+++ ++++.+..++|+...++ ..+++++.++
T Consensus 351 ~v~~~~~G~lv~~~d~~~la~ai~~ll~~----~~~~~~---~~~~~~~~~~W~~~~~~--~~~~~~l~~~ 412 (413)
T 2x0d_A 351 LSNWHSNIVSLEQLNPENIAETLVELCMS----FNNRDV---DKKESSNMMFYINEFNE--FSFIKEIEEK 412 (413)
T ss_dssp GGGTBTTEEEESSCSHHHHHHHHHHHHHH----TC----------CCBSCGGGCCCC-----TTHHHHHTT
T ss_pred hhhcCCCEEEeCCCCHHHHHHHHHHHHcC----HHHHHH---hHHHHHHhCCHHHHHHH--HHHHHHHHhh
Confidence 999999999986 799999999999985 445554 56666667889877655 4555555544
|
| >3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.9e-27 Score=240.49 Aligned_cols=262 Identities=12% Similarity=0.043 Sum_probs=183.7
Q ss_pred CCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhhhcCEEEEeCHHHHH
Q 011969 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179 (474)
Q Consensus 100 ~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~ 179 (474)
.+||+||+|++. . ..+++.++++..++|++++.|+.. ......++.. ...++.+.+.+|.++++|+..++
T Consensus 94 ~~pDvv~~~~~~-~-~~~~~~~~~~~~~ip~v~~~~~~~------~~~~~~~~~~--~~~~~~~~~~~d~ii~~s~~~~~ 163 (375)
T 3beo_A 94 AKPDIVLVHGDT-T-TTFIASLAAFYNQIPVGHVEAGLR------TWDKYSPYPE--EMNRQLTGVMADLHFSPTAKSAT 163 (375)
T ss_dssp HCCSEEEEETTS-H-HHHHHHHHHHHTTCCEEEESCCCC------CSCTTSSTTH--HHHHHHHHHHCSEEEESSHHHHH
T ss_pred hCCCEEEEeCCc-h-HHHHHHHHHHHHCCCEEEEecccc------cccccCCChh--HhhhhHHhhhhheeeCCCHHHHH
Confidence 689999998742 2 223345566778899998777651 1111111111 12333455679999999999999
Q ss_pred HHHHHhCCc---eEEEeCC-CC-CCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhccccccccc
Q 011969 180 ELAQNWGIK---ATVLYDQ-PP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFL 254 (474)
Q Consensus 180 ~l~~~~~~~---~~vi~n~-~~-~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (474)
.+.+ .|.+ +.+++|+ .+ ..+.+... .+.+++.+ +
T Consensus 164 ~~~~-~g~~~~~i~vi~n~~~d~~~~~~~~~-~~~~~~~~---------------------------------------~ 202 (375)
T 3beo_A 164 NLQK-ENKDESRIFITGNTAIDALKTTVKET-YSHPVLEK---------------------------------------L 202 (375)
T ss_dssp HHHH-TTCCGGGEEECCCHHHHHHHHHCCSS-CCCHHHHT---------------------------------------T
T ss_pred HHHH-cCCCcccEEEECChhHhhhhhhhhhh-hhHHHHHh---------------------------------------c
Confidence 8876 4653 7888886 22 11111100 00011111 1
Q ss_pred CCCCCeEEEEEeecccC-CCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCChHHHH
Q 011969 255 KPNRPALVVSSTSWTPD-EDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYE 333 (474)
Q Consensus 255 ~~~~~~~i~~~G~l~~~-k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~~~ 333 (474)
++++++++++|++.+. ||++.+++|+..+.++ .|++++++ |.|++. +++
T Consensus 203 -~~~~~vl~~~gr~~~~~K~~~~li~a~~~l~~~---------------------------~~~~~~i~-~~g~~~-~~~ 252 (375)
T 3beo_A 203 -GNNRLVLMTAHRRENLGEPMRNMFRAIKRLVDK---------------------------HEDVQVVY-PVHMNP-VVR 252 (375)
T ss_dssp -TTSEEEEEECCCGGGTTHHHHHHHHHHHHHHHH---------------------------CTTEEEEE-ECCSCH-HHH
T ss_pred -cCCCeEEEEecccccchhHHHHHHHHHHHHHhh---------------------------CCCeEEEE-eCCCCH-HHH
Confidence 2344577899999875 9999999999998763 67888654 667653 455
Q ss_pred HHHHHc-CC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEec-ccccccccccCCcE
Q 011969 334 EKIRRL-RL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS-YSCIEELVKVDKNG 410 (474)
Q Consensus 334 ~~~~~l-~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~-~~~~~e~v~~~~~G 410 (474)
+.++++ +. ++|.|.|. ++..++..+|+.||++|+ +| |..++|||+||+|||+++ .++..|++.++ +|
T Consensus 253 ~~~~~~~~~~~~v~~~g~-~~~~~~~~~~~~ad~~v~---~s-----g~~~lEA~a~G~Pvi~~~~~~~~~e~v~~g-~g 322 (375)
T 3beo_A 253 ETANDILGDYGRIHLIEP-LDVIDFHNVAARSYLMLT---DS-----GGVQEEAPSLGVPVLVLRDTTERPEGIEAG-TL 322 (375)
T ss_dssp HHHHHHHTTCTTEEEECC-CCHHHHHHHHHTCSEEEE---CC-----HHHHHHHHHHTCCEEECSSCCSCHHHHHTT-SE
T ss_pred HHHHHHhhccCCEEEeCC-CCHHHHHHHHHhCcEEEE---CC-----CChHHHHHhcCCCEEEecCCCCCceeecCC-ce
Confidence 555554 43 69999987 888899999999999999 45 567999999999999996 48899998777 99
Q ss_pred EEeC-CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHH
Q 011969 411 LLFS-SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATE 456 (474)
Q Consensus 411 ~l~~-~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~ 456 (474)
++++ |+++++++|..++++ ++.+++|+++++++...++|+..
T Consensus 323 ~~v~~d~~~la~~i~~ll~~----~~~~~~~~~~~~~~~~~~~~~~i 365 (375)
T 3beo_A 323 KLAGTDEETIFSLADELLSD----KEAHDKMSKASNPYGDGRASERI 365 (375)
T ss_dssp EECCSCHHHHHHHHHHHHHC----HHHHHHHCCCCCTTCCSCHHHHH
T ss_pred EEcCCCHHHHHHHHHHHHhC----hHhHhhhhhcCCCCCCCcHHHHH
Confidence 9994 899999999999994 88899999888766544544443
|
| >2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=5.7e-27 Score=243.28 Aligned_cols=236 Identities=12% Similarity=0.106 Sum_probs=173.1
Q ss_pred CCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhhhcCEEEEeCHHHHHH
Q 011969 101 SPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHE 180 (474)
Q Consensus 101 ~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~~ 180 (474)
++|+||.... .... ++. +++..++|+++++|+...... .. .. ...+.+++..++.||.++++|+.+++.
T Consensus 124 ~~DvIh~~~~--~~~~-~~~-~~~~~~~p~v~~~h~~~~~~~---~~-~~---~~~~~~~~~~~~~ad~vi~~S~~~~~~ 192 (406)
T 2hy7_A 124 ESDVIVFESG--IAVA-FIE-LAKRVNPAAKLVYRASDGLST---IN-VA---SYIEREFDRVAPTLDVIALVSPAMAAE 192 (406)
T ss_dssp HCSEEEEESS--GGGG-GHH-HHHHHCTTSEEEEEESSCHHH---HT-CC---HHHHHHHHHHGGGCSEEEESCGGGGGG
T ss_pred CCCEEEECCc--hHHH-HHH-HHHHhCCCEEEEEeccchhhc---cc-cc---HHHHHHHHHHHHhCCEEEEcCHHHHHH
Confidence 6999995442 2111 112 334557899999997532000 11 11 234567888889999999999999988
Q ss_pred HHHHhCCceEEEeCCCC-CCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhcccccccccCCCCC
Q 011969 181 LAQNWGIKATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKPNRP 259 (474)
Q Consensus 181 l~~~~~~~~~vi~n~~~-~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (474)
+.+. + ++.+++||.+ +.|.+... .+.+..
T Consensus 193 ~~~~-~-~i~vipngvd~~~f~~~~~------------------------------------------------~~~~~~ 222 (406)
T 2hy7_A 193 VVSR-D-NVFHVGHGVDHNLDQLGDP------------------------------------------------SPYAEG 222 (406)
T ss_dssp CSCS-T-TEEECCCCBCTTHHHHHCS------------------------------------------------CSCCSS
T ss_pred HHhc-C-CEEEEcCCcChHhcCcccc------------------------------------------------cccCCC
Confidence 7653 4 8999999854 33321100 012232
Q ss_pred eEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCChHHHHHHHHHc
Q 011969 260 ALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRL 339 (474)
Q Consensus 260 ~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~~~l 339 (474)
.+++|+|++.+.||+ ++++ .++ .|+++|+|+|+|+ ++++
T Consensus 223 ~~i~~vGrl~~~Kg~---~~~l---~~~---------------------------~~~~~l~ivG~g~--------~~~~ 261 (406)
T 2hy7_A 223 IHAVAVGSMLFDPEF---FVVA---SKA---------------------------FPQVTFHVIGSGM--------GRHP 261 (406)
T ss_dssp EEEEEECCTTBCHHH---HHHH---HHH---------------------------CTTEEEEEESCSS--------CCCT
T ss_pred cEEEEEeccccccCH---HHHH---HHh---------------------------CCCeEEEEEeCch--------HHhc
Confidence 489999999999998 3333 332 5899999999987 5567
Q ss_pred CC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHH-------hcCCcEEEecccccccccccCCcEE
Q 011969 340 RL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMF-------GCGLPVCAVSYSCIEELVKVDKNGL 411 (474)
Q Consensus 340 ~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eam-------a~G~PVia~~~~~~~e~v~~~~~G~ 411 (474)
++ ++|.|+|. ++.+++..+|+.||++|+ ||..|++|++++||| |||+|||+++. +.++.+|+
T Consensus 262 ~l~~~V~f~G~-~~~~~l~~~~~~adv~v~---ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~------v~~~~~G~ 331 (406)
T 2hy7_A 262 GYGDNVIVYGE-MKHAQTIGYIKHARFGIA---PYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA------VVGPYKSR 331 (406)
T ss_dssp TCCTTEEEECC-CCHHHHHHHHHTCSEEEC---CBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG------GTCSCSSE
T ss_pred CCCCCEEEcCC-CCHHHHHHHHHhcCEEEE---CCCcccCchHHHHHHHHHHHHhhCCCcEEEehh------cccCcceE
Confidence 77 79999998 999999999999999999 677899999999999 99999999987 66788999
Q ss_pred E-eC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHH
Q 011969 412 L-FS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHA 461 (474)
Q Consensus 412 l-~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ 461 (474)
+ ++ |+++|+++|..++++ ++ + +..+.++|+...+++.
T Consensus 332 l~v~~~d~~~la~ai~~ll~~----~~-----~----~~~~~~sw~~~a~~~~ 371 (406)
T 2hy7_A 332 FGYTPGNADSVIAAITQALEA----PR-----V----RYRQCLNWSDTTDRVL 371 (406)
T ss_dssp EEECTTCHHHHHHHHHHHHHC----CC-----C----CCSCCCBHHHHHHHHH
T ss_pred EEeCCCCHHHHHHHHHHHHhC----cc-----h----hhhhcCCHHHHHHHHH
Confidence 9 75 799999999999996 22 1 3345788887766654
|
| >1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.7e-26 Score=234.56 Aligned_cols=269 Identities=14% Similarity=0.106 Sum_probs=184.4
Q ss_pred CCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhhhcCEEEEeCHHHHH
Q 011969 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179 (474)
Q Consensus 100 ~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~ 179 (474)
.+||+||++++. . ....+.++++..++|++++.|+... .....++.. ......+.+.+|.++++|+..++
T Consensus 85 ~~pDvv~~~~~~-~-~~~~~~~~a~~~~ip~v~~~~~~~~------~~~~~~~~~--~~~~~~~~~~~d~ii~~s~~~~~ 154 (384)
T 1vgv_A 85 FKPDVVLVHGDT-T-TTLATSLAAFYQRIPVGHVEAGLRT------GDLYSPWPE--EANRTLTGHLAMYHFSPTETSRQ 154 (384)
T ss_dssp HCCSEEEEETTC-H-HHHHHHHHHHTTTCCEEEESCCCCC------SCTTSSTTH--HHHHHHHHTTCSEEEESSHHHHH
T ss_pred hCCCEEEEeCCc-h-HHHHHHHHHHHHCCCEEEEeccccc------ccccCCCch--HhhHHHHHhhccEEEcCcHHHHH
Confidence 689999999742 2 2223445667789999999898621 111111111 11222335679999999999999
Q ss_pred HHHHHhCCc---eEEEeCCC-CCCCCCCC-----hHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhccccc
Q 011969 180 ELAQNWGIK---ATVLYDQP-PEFFHPTS-----LEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGI 250 (474)
Q Consensus 180 ~l~~~~~~~---~~vi~n~~-~~~f~~~~-----~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (474)
.+.+ +|.+ +.+++|+. +..+.+.. ...+.++++++|
T Consensus 155 ~l~~-~g~~~~~i~vi~n~~~d~~~~~~~~~~~~~~~~~~~~~~~~---------------------------------- 199 (384)
T 1vgv_A 155 NLLR-ENVADSRIFITGNTVIDALLWVRDQVMSSDKLRSELAANYP---------------------------------- 199 (384)
T ss_dssp HHHH-TTCCGGGEEECCCHHHHHHHHHHHHTTTCHHHHHHHHTTCT----------------------------------
T ss_pred HHHH-cCCChhhEEEeCChHHHHHHhhhhccccchhhhHHHHHhcc----------------------------------
Confidence 8876 4653 77787762 21110000 000012222211
Q ss_pred ccccCCCCCeEEEEEeecccC-CCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEE-eCCC-
Q 011969 251 DVFLKPNRPALVVSSTSWTPD-EDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIIT-GKGP- 327 (474)
Q Consensus 251 ~~~~~~~~~~~i~~~G~l~~~-k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iv-G~g~- 327 (474)
.++++++.+++++|++.+. ||++.+++|+..+.++ .|+++|+++ |.++
T Consensus 200 --~~~~~~~~vl~~~gr~~~~~kg~~~li~a~~~l~~~---------------------------~~~~~l~i~~g~~~~ 250 (384)
T 1vgv_A 200 --FIDPDKKMILVTGHRRESFGRGFEEICHALADIATT---------------------------HQDIQIVYPVHLNPN 250 (384)
T ss_dssp --TCCTTSEEEEEECCCBSSCCHHHHHHHHHHHHHHHH---------------------------CTTEEEEEECCBCHH
T ss_pred --ccCCCCCEEEEEeCCccccchHHHHHHHHHHHHHhh---------------------------CCCeEEEEEcCCCHH
Confidence 0223455678899999876 9999999999998774 678999885 5443
Q ss_pred ChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecc-ccccccccc
Q 011969 328 DKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY-SCIEELVKV 406 (474)
Q Consensus 328 ~~~~~~~~~~~l~l~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~-~~~~e~v~~ 406 (474)
..+.+++.+.. .++|.|.|. ++.+++..+|+.||++|+ +| |..++|||+||+|||+++. ++..|++.+
T Consensus 251 ~~~~l~~~~~~--~~~v~~~g~-~~~~~~~~~~~~ad~~v~---~S-----g~~~lEA~a~G~PvI~~~~~~~~~e~v~~ 319 (384)
T 1vgv_A 251 VREPVNRILGH--VKNVILIDP-QEYLPFVWLMNHAWLILT---DS-----GGIQEEAPSLGKPVLVMRDTTERPEAVTA 319 (384)
T ss_dssp HHHHHHHHHTT--CTTEEEECC-CCHHHHHHHHHHCSEEEE---SS-----STGGGTGGGGTCCEEEESSCCSCHHHHHH
T ss_pred HHHHHHHHhhc--CCCEEEeCC-CCHHHHHHHHHhCcEEEE---CC-----cchHHHHHHcCCCEEEccCCCCcchhhhC
Confidence 22333333221 268999987 888999999999999999 45 2348999999999999986 899999877
Q ss_pred CCcEEEeC-CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHH
Q 011969 407 DKNGLLFS-SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWE 458 (474)
Q Consensus 407 ~~~G~l~~-~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~ 458 (474)
+ +|++++ |+++|+++|..++++ ++.+++|+++++++...++|+...+
T Consensus 320 g-~g~lv~~d~~~la~~i~~ll~d----~~~~~~~~~~~~~~~~~~~~~~i~~ 367 (384)
T 1vgv_A 320 G-TVRLVGTDKQRIVEEVTRLLKD----ENEYQAMSRAHNPYGDGQACSRILE 367 (384)
T ss_dssp T-SEEEECSSHHHHHHHHHHHHHC----HHHHHHHHSSCCTTCCSCHHHHHHH
T ss_pred C-ceEEeCCCHHHHHHHHHHHHhC----hHHHhhhhhccCCCcCCCHHHHHHH
Confidence 7 999996 899999999999994 8889999998877655555555443
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.6e-25 Score=240.08 Aligned_cols=260 Identities=13% Similarity=0.093 Sum_probs=190.7
Q ss_pred CCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhhhcCEEEEeCHHHHH
Q 011969 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179 (474)
Q Consensus 100 ~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~ 179 (474)
.+||+||.++....... +..++ .+..|+++++|+...+ .+ .. ...+..+|.++++|+..++
T Consensus 281 ~~~Div~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~-----~~--~~---------~~~~~~~d~~i~~s~~~~~ 341 (568)
T 2vsy_A 281 HGIDLLFDLRGWGGGGR-PEVFA--LRPAPVQVNWLAYPGT-----SG--AP---------WMDYVLGDAFALPPALEPF 341 (568)
T ss_dssp TTCSEEEECSSCTTCSS-CHHHH--TCCSSEEEEESSSSSC-----CC--CT---------TCCEEEECTTTSCTTTGGG
T ss_pred CCCCEEEECCCCCCcch-HHHHh--cCCCceeEeeecCCcc-----cC--CC---------CceEEEECCCcCCcccccC
Confidence 78999998664332211 12222 2346888888875210 01 00 0112357888899986553
Q ss_pred HHHHHhCCceEEEeCCCCCCCCCCChH---HHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhcccccccccCC
Q 011969 180 ELAQNWGIKATVLYDQPPEFFHPTSLE---EKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKP 256 (474)
Q Consensus 180 ~l~~~~~~~~~vi~n~~~~~f~~~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (474)
++.++.+++|. |.+.... .....+.++| ++.
T Consensus 342 -----~~~~i~~ipn~----~~~~~~~~~~~~~~~r~~~~-------------------------------------~~~ 375 (568)
T 2vsy_A 342 -----YSEHVLRLQGA----FQPSDTSRVVAEPPSRTQCG-------------------------------------LPE 375 (568)
T ss_dssp -----CSSEEEECSSC----SCCCCTTCCCCCCCCTGGGT-------------------------------------CCT
T ss_pred -----CcceeEcCCCc----CCCCCCCCCCCCCCCccccC-------------------------------------CCC
Confidence 45668889883 3222100 0001122222 222
Q ss_pred CCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEe-CCCChHHHHHH
Q 011969 257 NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITG-KGPDKESYEEK 335 (474)
Q Consensus 257 ~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG-~g~~~~~~~~~ 335 (474)
.+ +++++|++.+ ||++.+++++..+.++ .|+++|+|+| +|+..+.+++.
T Consensus 376 -~~-~v~~~g~~~~-K~~~~li~a~~~l~~~---------------------------~~~~~l~i~G~~g~~~~~l~~~ 425 (568)
T 2vsy_A 376 -QG-VVLCCFNNSY-KLNPQSMARMLAVLRE---------------------------VPDSVLWLLSGPGEADARLRAF 425 (568)
T ss_dssp -TS-CEEEECCCGG-GCCHHHHHHHHHHHHH---------------------------CTTCEEEEECCSTTHHHHHHHH
T ss_pred -CC-EEEEeCCccc-cCCHHHHHHHHHHHHh---------------------------CCCcEEEEecCCHHHHHHHHHH
Confidence 23 4669999999 9999999999998774 6899999999 89888999999
Q ss_pred HHHcCC--CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEE-------eccc-------c
Q 011969 336 IRRLRL--KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCA-------VSYS-------C 399 (474)
Q Consensus 336 ~~~l~l--~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia-------~~~~-------~ 399 (474)
++++|+ ++|.|+|. ++.+++..+|+.||++|+ ||.. ++|++++|||+||+|||+ ++.+ +
T Consensus 426 ~~~~~l~~~~v~~~g~-~~~~~~~~~~~~adv~v~---ps~~-~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~g 500 (568)
T 2vsy_A 426 AHAQGVDAQRLVFMPK-LPHPQYLARYRHADLFLD---THPY-NAHTTASDALWTGCPVLTTPGETFAARVAGSLNHHLG 500 (568)
T ss_dssp HHHTTCCGGGEEEECC-CCHHHHHHHGGGCSEEEC---CSSS-CCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHHHT
T ss_pred HHHcCCChhHEEeeCC-CCHHHHHHHHhcCCEEee---CCCC-CCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHHCC
Confidence 999998 58999998 999999999999999999 5766 899999999999999999 9999 8
Q ss_pred cccccccCCcEEEeCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc---cccchHHHHHHHHHHHHHHHhhcc
Q 011969 400 IEELVKVDKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG---LSARWATEWEEHAKPLITEVISQF 472 (474)
Q Consensus 400 ~~e~v~~~~~G~l~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~w~~~~~~~~~~~~~~~~~~~ 472 (474)
+.|+|.+ |+++++++|..++++ ++.+++|++++++.. ..++|+...++ ...+++++..++
T Consensus 501 ~~e~v~~--------~~~~la~~i~~l~~~----~~~~~~~~~~~~~~~~~~~~f~~~~~~~~-~~~~y~~~~~~~ 563 (568)
T 2vsy_A 501 LDEMNVA--------DDAAFVAKAVALASD----PAALTALHARVDVLRRASGVFHMDGFADD-FGALLQALARRH 563 (568)
T ss_dssp CGGGBCS--------SHHHHHHHHHHHHHC----HHHHHHHHHHHHHHHHHSSTTCHHHHHHH-HHHHHHHHHHTT
T ss_pred ChhhhcC--------CHHHHHHHHHHHhcC----HHHHHHHHHHHHHhhhcCCCCCHHHHHHH-HHHHHHHHHHHH
Confidence 8888754 899999999999994 889999999998876 67899876654 455566665543
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.93 E-value=3.8e-25 Score=199.26 Aligned_cols=161 Identities=13% Similarity=0.261 Sum_probs=140.9
Q ss_pred CeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCChHHHHHHHHH
Q 011969 259 PALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRR 338 (474)
Q Consensus 259 ~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~~~ 338 (474)
|++++|+|++.+.||++.+++|+..+.+ .|+++|+|+|+|+..+.+++.+++
T Consensus 2 ~~~i~~~G~~~~~Kg~~~li~a~~~l~~----------------------------~~~~~l~i~G~g~~~~~~~~~~~~ 53 (166)
T 3qhp_A 2 PFKIAMVGRYSNEKNQSVLIKAVALSKY----------------------------KQDIVLLLKGKGPDEKKIKLLAQK 53 (166)
T ss_dssp CEEEEEESCCSTTTTHHHHHHHHHTCTT----------------------------GGGEEEEEECCSTTHHHHHHHHHH
T ss_pred ceEEEEEeccchhcCHHHHHHHHHHhcc----------------------------CCCeEEEEEeCCccHHHHHHHHHH
Confidence 4589999999999999999999999854 478999999999999999999999
Q ss_pred cCCCcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCC-cEEE-ecccccccccccCCcEEEeCCH
Q 011969 339 LRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGL-PVCA-VSYSCIEELVKVDKNGLLFSSS 416 (474)
Q Consensus 339 l~l~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~-PVia-~~~~~~~e~v~~~~~G~l~~~~ 416 (474)
+++ +|.| |. ++.+++..+|+.||++|+ ||..|++|++++|||+||+ |||+ ++.++..+++.++.+.+...|+
T Consensus 54 ~~~-~v~~-g~-~~~~~~~~~~~~adv~v~---ps~~e~~~~~~~Eama~G~vPvi~~~~~~~~~~~~~~~~~~~~~~~~ 127 (166)
T 3qhp_A 54 LGV-KAEF-GF-VNSNELLEILKTCTLYVH---AANVESEAIACLEAISVGIVPVIANSPLSATRQFALDERSLFEPNNA 127 (166)
T ss_dssp HTC-EEEC-CC-CCHHHHHHHHTTCSEEEE---CCCSCCCCHHHHHHHHTTCCEEEECCTTCGGGGGCSSGGGEECTTCH
T ss_pred cCC-eEEE-ee-cCHHHHHHHHHhCCEEEE---CCcccCccHHHHHHHhcCCCcEEeeCCCCchhhhccCCceEEcCCCH
Confidence 998 8999 77 999999999999999999 6888999999999999998 9999 4688999999887764334589
Q ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHH
Q 011969 417 SELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEW 457 (474)
Q Consensus 417 ~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~ 457 (474)
++++++|..++++ ++.++++++++++..++++|+...
T Consensus 128 ~~l~~~i~~l~~~----~~~~~~~~~~~~~~~~~~s~~~~~ 164 (166)
T 3qhp_A 128 KDLSAKIDWWLEN----KLERERMQNEYAKSALNYTLENSV 164 (166)
T ss_dssp HHHHHHHHHHHHC----HHHHHHHHHHHHHHHHHHC-----
T ss_pred HHHHHHHHHHHhC----HHHHHHHHHHHHHHHHHCChhhhh
Confidence 9999999999994 899999999999988788887654
|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.92 E-value=7.4e-24 Score=196.24 Aligned_cols=151 Identities=20% Similarity=0.266 Sum_probs=139.1
Q ss_pred EEEEEeecc-cCCCHHHHHHHHHHhH--HHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCC--ChHHHHHH
Q 011969 261 LVVSSTSWT-PDEDFGILLEAALMYD--RRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP--DKESYEEK 335 (474)
Q Consensus 261 ~i~~~G~l~-~~k~~~~Li~a~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~--~~~~~~~~ 335 (474)
+++|+|++. +.||++.+++++..+. + ..|+++|+|+|.|+ ..+++++.
T Consensus 38 ~i~~~G~~~~~~K~~~~li~a~~~l~~~~---------------------------~~~~~~l~i~G~~~~~~~~~l~~~ 90 (200)
T 2bfw_A 38 TFMFIGRFDRGQKGVDVLLKAIEILSSKK---------------------------EFQEMRFIIIGKGDPELEGWARSL 90 (200)
T ss_dssp EEEEESCBCSSSSCHHHHHHHHHHHTTSG---------------------------GGGGEEEEEECCBCHHHHHHHHHH
T ss_pred EEEEeeccccccCCHHHHHHHHHHHHhhc---------------------------cCCCeEEEEECCCChHHHHHHHHH
Confidence 899999999 9999999999999985 4 25889999999998 77889999
Q ss_pred HHHcCCCcEEE-ecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecccccccccccCCcEEEeC
Q 011969 336 IRRLRLKRVAF-RTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFS 414 (474)
Q Consensus 336 ~~~l~l~~V~f-~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~~~~e~v~~~~~G~l~~ 414 (474)
+++++ +|.| .|. ++.+++..+|+.||++|+ ++..|++|++++|||+||+|||+++.++..+++ ++.+|++++
T Consensus 91 ~~~~~--~v~~~~g~-~~~~~~~~~~~~ad~~l~---ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~~-~~~~g~~~~ 163 (200)
T 2bfw_A 91 EEKHG--NVKVITEM-LSREFVRELYGSVDFVII---PSYFEPFGLVALEAMCLGAIPIASAVGGLRDII-TNETGILVK 163 (200)
T ss_dssp HHHCT--TEEEECSC-CCHHHHHHHHTTCSEEEE---CCSCCSSCHHHHHHHHTTCEEEEESCHHHHHHC-CTTTCEEEC
T ss_pred HHhcC--CEEEEecc-CCHHHHHHHHHHCCEEEE---CCCCCCccHHHHHHHHCCCCEEEeCCCChHHHc-CCCceEEec
Confidence 99988 9999 988 999999999999999999 677799999999999999999999999999999 999999997
Q ss_pred --CHHHHHHHHHHHHh-CCCCCHHHHHHHHHHHHHhcc
Q 011969 415 --SSSELADQLLMLFK-GFPDDSDVLKKLRNGTLEMGL 449 (474)
Q Consensus 415 --~~~~la~~i~~l~~-~~~~~~~~~~~~~~~~~~~~~ 449 (474)
|+++++++|..+++ + ++.+++|++++++...
T Consensus 164 ~~~~~~l~~~i~~l~~~~----~~~~~~~~~~a~~~~~ 197 (200)
T 2bfw_A 164 AGDPGELANAILKALELS----RSDLSKFRENCKKRAM 197 (200)
T ss_dssp TTCHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhcC----HHHHHHHHHHHHHHHH
Confidence 79999999999998 5 8899999999998653
|
| >3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2.1e-23 Score=212.36 Aligned_cols=258 Identities=12% Similarity=0.038 Sum_probs=184.1
Q ss_pred hcCCCCEEEEeCCCChhHHHHHHHHHhh--CCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhhhcCEEEEeCH
Q 011969 98 KIASPDVFLVQNPPSVPTLVAVKWASSL--RRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQ 175 (474)
Q Consensus 98 ~~~~~Dvi~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~ 175 (474)
...++|+|+++.|+.........+++++ +++|+|+.+||++.... . ... .....|+.+++.||.|++.|+
T Consensus 71 ~~~~~DvIi~q~P~~~~~~~~~~~~~~lk~~~~k~i~~ihDl~pl~~----~-~~~---~~~~~E~~~y~~aD~Ii~~S~ 142 (339)
T 3rhz_A 71 GLRHGDVVIFQTPTWNTTEFDEKLMNKLKLYDIKIVLFIHDVVPLMF----S-GNF---YLMDRTIAYYNKADVVVAPSQ 142 (339)
T ss_dssp TCCTTCEEEEEECCSSCHHHHHHHHHHHTTSSCEEEEEESCCHHHHC----G-GGG---GGHHHHHHHHTTCSEEEESCH
T ss_pred cCCCCCEEEEeCCCcchhhHHHHHHHHHHhcCCEEEEEecccHHhhC----c-cch---hhHHHHHHHHHHCCEEEECCH
Confidence 4588999999999754333223444443 38999999999953211 1 111 123479999999999999999
Q ss_pred HHHHHHHHHhCCc-eEEEeCCCCCCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhccccccccc
Q 011969 176 AMQHELAQNWGIK-ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFL 254 (474)
Q Consensus 176 ~~~~~l~~~~~~~-~~vi~n~~~~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (474)
.+++.+.+. |.+ ..+++.+.-+...+.+. .
T Consensus 143 ~~~~~l~~~-G~~~~ki~~~~~~~~~~~~~~-----------------------------------------------~- 173 (339)
T 3rhz_A 143 KMIDKLRDF-GMNVSKTVVQGMWDHPTQAPM-----------------------------------------------F- 173 (339)
T ss_dssp HHHHHHHHT-TCCCSEEEECCSCCCCCCCCC-----------------------------------------------C-
T ss_pred HHHHHHHHc-CCCcCceeecCCCCccCcccc-----------------------------------------------c-
Confidence 999999874 665 33333221000000000 0
Q ss_pred CCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCChHHHHH
Q 011969 255 KPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEE 334 (474)
Q Consensus 255 ~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~ 334 (474)
.+.....++|+|+++.... +..+ .++++|+|+|+|+++
T Consensus 174 ~~~~~~~i~yaG~l~k~~~-------L~~l------------------------------~~~~~f~ivG~G~~~----- 211 (339)
T 3rhz_A 174 PAGLKREIHFPGNPERFSF-------VKEW------------------------------KYDIPLKVYTWQNVE----- 211 (339)
T ss_dssp CCEEEEEEEECSCTTTCGG-------GGGC------------------------------CCSSCEEEEESCCCC-----
T ss_pred ccCCCcEEEEeCCcchhhH-------HHhC------------------------------CCCCeEEEEeCCccc-----
Confidence 0112248999999984211 1111 267999999999875
Q ss_pred HHHHcCCCcEEEecCCCCcccHHHHHhcccEEEeeccCCC----CCCCchHHHHHHhcCCcEEEecccccccccccCCcE
Q 011969 335 KIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS----GLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNG 410 (474)
Q Consensus 335 ~~~~l~l~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~----~e~~p~kv~Eama~G~PVia~~~~~~~e~v~~~~~G 410 (474)
.++||.|+|. +|.++++.+++.+|++++...... ...+|+|++||||||+|||+++.++..++++++++|
T Consensus 212 -----~l~nV~f~G~-~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~~~~~~~~v~~~~~G 285 (339)
T 3rhz_A 212 -----LPQNVHKINY-RPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQEGIANQELIENNGLG 285 (339)
T ss_dssp -----CCTTEEEEEC-CCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEETTCTTTHHHHHHTCE
T ss_pred -----CcCCEEEeCC-CCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEccChhHHHHHHhCCeE
Confidence 2349999998 999999999999999998511111 146799999999999999999999999999999999
Q ss_pred EEeCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHHHHHHH
Q 011969 411 LLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLIT 466 (474)
Q Consensus 411 ~l~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 466 (474)
+++++.++++++|..+. ++++++|++++++.+...+|..--++.+.+.+.
T Consensus 286 ~~~~~~~e~~~~i~~l~------~~~~~~m~~na~~~a~~~~~~~f~k~~l~~~~~ 335 (339)
T 3rhz_A 286 WIVKDVEEAIMKVKNVN------EDEYIELVKNVRSFNPILRKGFFTRRLLTESVF 335 (339)
T ss_dssp EEESSHHHHHHHHHHCC------HHHHHHHHHHHHHHTHHHHTTHHHHHHHHHHHH
T ss_pred EEeCCHHHHHHHHHHhC------HHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHH
Confidence 99999999999998762 567999999999988777777665555544433
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.2e-22 Score=220.34 Aligned_cols=331 Identities=15% Similarity=0.075 Sum_probs=209.5
Q ss_pred CCCCEEEEeCCCChhHHHHHHHHH-hhCCCcEEEEecCchhhhh--h-h------ccCCCc-h---HH---HHHHHHHHH
Q 011969 100 ASPDVFLVQNPPSVPTLVAVKWAS-SLRRSAFIVDWHNFGYTLL--S-L------SLGRRS-H---FV---SIYRWIEKY 162 (474)
Q Consensus 100 ~~~Dvi~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~h~~~~~~~--~-~------~~~~~~-~---~~---~~~~~~e~~ 162 (474)
.+||++|+|. +.+.++..+++ +..++++|+++|+..+.-. . . .+...+ . .. .-...+|+.
T Consensus 180 ~~pdIiH~HD---W~tg~~~~~Lk~~~~~i~tVfTiH~telGR~lagqg~~~~y~~L~~~~~d~ea~~~~i~~~~~~EKa 256 (725)
T 3nb0_A 180 QHAIVAHFHE---WLAGVALPLCRKRRIDVVTIFTTHATLLGRYLCASGSFDFYNCLESVDVDHEAGRFGIYHRYCIERA 256 (725)
T ss_dssp SEEEEEEEES---GGGCTHHHHHHHTTCSCEEEEEESSCHHHHHHTSSSCSCHHHHGGGCCHHHHHHHTTCHHHHHHHHH
T ss_pred CCCcEEEeCc---hhhhHHHHHHHHhCCCCCEEEEEecchhhhhhhhcCCCchhhhhhhcCCChhhhhhchhHHHHHHHH
Confidence 4599999999 44444445554 3558999999999832111 0 0 000000 0 00 112467888
Q ss_pred HhhhcCEEEEeCHHHHHHHHHHhCCc-eEEEeCC-CCCCCCCCChH--HHHHHHHhhhhccCCCCCccccccccccCCcC
Q 011969 163 YGKMANGCLCVTQAMQHELAQNWGIK-ATVLYDQ-PPEFFHPTSLE--EKHELFCRLNKILHQPLGVQDCVSNAGMEGQK 238 (474)
Q Consensus 163 ~~~~ad~vi~vS~~~~~~l~~~~~~~-~~vi~n~-~~~~f~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 238 (474)
....||.|+|||+.++++++..++.+ -.+|+|| +.+.|.|.... .+...++++...+
T Consensus 257 ga~~AD~ITTVS~~yA~Ei~~Ll~r~~d~iIpNGID~~~f~p~~~~~~~k~~aK~klq~~l------------------- 317 (725)
T 3nb0_A 257 AAHSADVFTTVSQITAFEAEHLLKRKPDGILPNGLNVIKFQAFHEFQNLHALKKEKINDFV------------------- 317 (725)
T ss_dssp HHHHSSEEEESSHHHHHHHHHHTSSCCSEECCCCBCCCCCSSTTHHHHHHHHHHHHHHHHH-------------------
T ss_pred HHHhCCEEEECCHHHHHHHHHHhcCCCCEEEcCCccccccCcchhhHHHHHHHHHHHHHHH-------------------
Confidence 88999999999999999999876655 3449999 55788775321 2222222221000
Q ss_pred cchhhhhcccccccccCCCCCeEEEEEeecc-cCCCHHHHHHHHHHhHHHHhhh---------hccCCC-----------
Q 011969 239 ADETIFTSLAGIDVFLKPNRPALVVSSTSWT-PDEDFGILLEAALMYDRRVAAI---------LNEDDS----------- 297 (474)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~i~~~G~l~-~~k~~~~Li~a~~~l~~~~~~~---------~~~~~~----------- 297 (474)
.....+.+.+.++..+++..+||++ .+||++.+++|+..+..++..- +---..
T Consensus 318 ------~~~~~~~l~l~~dk~liifivgRle~~nKGiDl~ieAl~~L~~~l~~~~~~~~vvafii~p~~~~~~~~~~l~~ 391 (725)
T 3nb0_A 318 ------RGHFHGCFDFDLDNTLYFFIAGRYEYKNKGADMFIEALARLNYRLKVSGSKKTVVAFIVMPAKNNSFTVEALKG 391 (725)
T ss_dssp ------HHHTTTCCCSCGGGEEEEEEESSCCTTTTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEECCCCEEEECHHHHHH
T ss_pred ------HhhcccCCCCCCCceeEEEEEEEeccccCCHHHHHHHHHHHHHHHhhccCCCcEEEEEEeCCCCCCCchhhhcc
Confidence 0000011123333444667789999 6899999999999998753210 000000
Q ss_pred ---------------------------------------chhhHhHhh-h-----------cCCccccCCCEEEEEEeCC
Q 011969 298 ---------------------------------------TNEEVFLKE-I-----------SDGKQYLYPRLLFIITGKG 326 (474)
Q Consensus 298 ---------------------------------------~~~~~~~~~-~-----------~~~~~~~~~~~~l~ivG~g 326 (474)
++.+..|+. - ........|-+.-.++-
T Consensus 392 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~~~~~~~~lpp~~TH~~~~-- 469 (725)
T 3nb0_A 392 QAEVRALENTVHEVTTSIGKRIFDHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALRRPEGQLPPIVTHNMVD-- 469 (725)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHHHCCCTTCCCCSBSEEETT--
T ss_pred hhHHHHHHHHHHHHHHHHhHHHHHHHhcccccccCCCCCCCHHHhcChHHHHHHHHHHHhhccCCCCCCCeeeeeccc--
Confidence 011111100 0 00000112322223322
Q ss_pred CChHHHHHHHHHcCC-C------cEEEecCCCCcc------cHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEE
Q 011969 327 PDKESYEEKIRRLRL-K------RVAFRTMWLSAE------DYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVC 393 (474)
Q Consensus 327 ~~~~~~~~~~~~l~l-~------~V~f~g~~v~~~------~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVi 393 (474)
...+.+...++++++ + +|.|.+.|++.. ++..+|+.||++|+ ||..|+||++++||||||+|||
T Consensus 470 ~~~D~Il~~~r~l~L~N~~~drVKVIf~P~~L~~~d~lf~~d~~~~~~~advfV~---PS~~EgfGl~~LEAmA~G~PvI 546 (725)
T 3nb0_A 470 DANDLILNKIRQVQLFNSPSDRVKMIFHPEFLNANNPILGLDYDEFVRGCHLGVF---PSYYEPWGYTPAECTVMGVPSI 546 (725)
T ss_dssp GGGCHHHHHHHHHTCCCCTTCSEEEEECCSCCCTTCSSSCCCHHHHHHHCSEEEC---CCSSBSSCHHHHHHHHTTCCEE
T ss_pred CCccHHHHHHHhcCCCCCcCCceeEEEeccccCCCCccchhHHHHHHhhceEEEe---ccccCCCCHHHHHHHHcCCCEE
Confidence 224567888899988 3 389999889887 59999999999999 7899999999999999999999
Q ss_pred EecccccccccccC-------CcEEEeC-----CHHHHHHHHHHHHhCCC-CCHHHHHHHHHHHHHhccccchHHHHHHH
Q 011969 394 AVSYSCIEELVKVD-------KNGLLFS-----SSSELADQLLMLFKGFP-DDSDVLKKLRNGTLEMGLSARWATEWEEH 460 (474)
Q Consensus 394 a~~~~~~~e~v~~~-------~~G~l~~-----~~~~la~~i~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~w~~~~~~~ 460 (474)
+++.+|..+.|.++ .+|+++. ++++++++|...+..+. .++..++++++++++++..++|+...+++
T Consensus 547 ~s~~gG~~d~V~dg~~~~~~~~tG~lV~~rd~~d~ee~aeaLa~aL~~f~~~d~~~r~~mr~~ar~~A~~FSWe~iA~~Y 626 (725)
T 3nb0_A 547 TTNVSGFGSYMEDLIETNQAKDYGIYIVDRRFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEALSDLLDWKRMGLEY 626 (725)
T ss_dssp EETTBHHHHHHHTTSCHHHHHHTTEEEECCSSSCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHGGGGGBHHHHHHHH
T ss_pred EeCCCChhhhhhccccccCCCCceEEEeCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 99999999998775 3798772 45555555544443111 15788899999999988899999877665
Q ss_pred HHH
Q 011969 461 AKP 463 (474)
Q Consensus 461 ~~~ 463 (474)
.+.
T Consensus 627 l~~ 629 (725)
T 3nb0_A 627 VKA 629 (725)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
|
| >1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3 | Back alignment and structure |
|---|
Probab=99.90 E-value=3.5e-23 Score=210.13 Aligned_cols=267 Identities=16% Similarity=0.085 Sum_probs=177.9
Q ss_pred CCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhhhcCEEEEeCHHHHH
Q 011969 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179 (474)
Q Consensus 100 ~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~ 179 (474)
.+||+||+++... ..+.+.++++..++|+++..++... .....++. ....++.+.+.+|.++++|+..++
T Consensus 90 ~~pDvv~~~~~~~--~~~~~~~~a~~~~ip~v~~~~~~~~------~~~~~~~~--~~~~~~~~~~~~~~~~~~s~~~~~ 159 (376)
T 1v4v_A 90 MGADYVLVHGDTL--TTFAVAWAAFLEGIPVGHVEAGLRS------GNLKEPFP--EEANRRLTDVLTDLDFAPTPLAKA 159 (376)
T ss_dssp TTCSEEEEESSCH--HHHHHHHHHHHTTCCEEEETCCCCC------SCTTSSTT--HHHHHHHHHHHCSEEEESSHHHHH
T ss_pred cCCCEEEEeCChH--HHHHHHHHHHHhCCCEEEEeCCCcc------ccccCCCc--hHHHHHHHHHHhceeeCCCHHHHH
Confidence 7899999997532 2223455677788998654433310 01101110 112344566789999999999998
Q ss_pred HHHHHhCCc---eEEEeCCCCCCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhcccccccccCC
Q 011969 180 ELAQNWGIK---ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKP 256 (474)
Q Consensus 180 ~l~~~~~~~---~~vi~n~~~~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (474)
.+.+. |.+ +.+++|+..+.+.. ......+. . .+ +
T Consensus 160 ~l~~~-g~~~~ki~vi~n~~~d~~~~------~~~~~~~~-----------------------------~------~~-~ 196 (376)
T 1v4v_A 160 NLLKE-GKREEGILVTGQTGVDAVLL------AAKLGRLP-----------------------------E------GL-P 196 (376)
T ss_dssp HHHTT-TCCGGGEEECCCHHHHHHHH------HHHHCCCC-----------------------------T------TC-C
T ss_pred HHHHc-CCCcceEEEECCchHHHHhh------hhhhhHHH-----------------------------H------hc-C
Confidence 88764 653 66666642111100 00000000 0 01 2
Q ss_pred CCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEE-eCCC-ChHHHHH
Q 011969 257 NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIIT-GKGP-DKESYEE 334 (474)
Q Consensus 257 ~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iv-G~g~-~~~~~~~ 334 (474)
+++++++++|++...||++.+++|+..+.++ .|+++++++ |+++ ..+.+++
T Consensus 197 ~~~~vl~~~gr~~~~k~~~~ll~a~~~l~~~---------------------------~~~~~lv~~~g~~~~~~~~l~~ 249 (376)
T 1v4v_A 197 EGPYVTVTMHRRENWPLLSDLAQALKRVAEA---------------------------FPHLTFVYPVHLNPVVREAVFP 249 (376)
T ss_dssp SSCEEEECCCCGGGGGGHHHHHHHHHHHHHH---------------------------CTTSEEEEECCSCHHHHHHHHH
T ss_pred CCCEEEEEeCcccchHHHHHHHHHHHHHHhh---------------------------CCCeEEEEECCCCHHHHHHHHH
Confidence 3455778899998778999999999998763 678888886 7665 2444554
Q ss_pred HHHHcCCCcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEec-ccccccccccCCcEEEe
Q 011969 335 KIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS-YSCIEELVKVDKNGLLF 413 (474)
Q Consensus 335 ~~~~l~l~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~-~~~~~e~v~~~~~G~l~ 413 (474)
.++. .++|.|+|. ++..++..+|+.||++|+ +| + |. ++|||+||+|||+++ .++..+++.. ++|+++
T Consensus 250 ~~~~--~~~v~~~g~-~g~~~~~~~~~~ad~~v~---~S--~--g~-~lEA~a~G~PvI~~~~~~~~~~~~~~-g~g~lv 317 (376)
T 1v4v_A 250 VLKG--VRNFVLLDP-LEYGSMAALMRASLLLVT---DS--G--GL-QEEGAALGVPVVVLRNVTERPEGLKA-GILKLA 317 (376)
T ss_dssp HHTT--CTTEEEECC-CCHHHHHHHHHTEEEEEE---SC--H--HH-HHHHHHTTCCEEECSSSCSCHHHHHH-TSEEEC
T ss_pred Hhcc--CCCEEEECC-CCHHHHHHHHHhCcEEEE---CC--c--CH-HHHHHHcCCCEEeccCCCcchhhhcC-CceEEC
Confidence 4432 368999987 777899999999999998 45 2 33 789999999999984 6888887754 589999
Q ss_pred -CCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHHHHHHH
Q 011969 414 -SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLIT 466 (474)
Q Consensus 414 -~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 466 (474)
.|+++|+++|.+++++ ++.+++|++++. .+.|...++++++.+.+
T Consensus 318 ~~d~~~la~~i~~ll~d----~~~~~~~~~~~~----~~~~~~~~~~i~~~i~~ 363 (376)
T 1v4v_A 318 GTDPEGVYRVVKGLLEN----PEELSRMRKAKN----PYGDGKAGLMVARGVAW 363 (376)
T ss_dssp CSCHHHHHHHHHHHHTC----HHHHHHHHHSCC----SSCCSCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhC----hHhhhhhcccCC----CCCCChHHHHHHHHHHH
Confidence 5899999999999984 888888887443 45555566665554433
|
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=5.1e-22 Score=211.12 Aligned_cols=282 Identities=9% Similarity=0.023 Sum_probs=187.2
Q ss_pred cCCCCEEEEeCCCChhHHHHHHHHHh-hCCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhhhcCEEEEeCHHH
Q 011969 99 IASPDVFLVQNPPSVPTLVAVKWASS-LRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAM 177 (474)
Q Consensus 99 ~~~~Dvi~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~ 177 (474)
..++|+||+|+... .++...++. ..+.|+++.+|....... .+. ..+.. ..+-+. ...+|.+...+...
T Consensus 121 ~~~~DiV~vHdyhl---~~l~~~lr~~~~~~~i~~~~H~pfp~~~--~~~-~lp~~---~~il~~-ll~~d~i~f~~~~~ 190 (482)
T 1uqt_A 121 LQDDDIIWIHDYHL---LPFAHELRKRGVNNRIGFFLHIPFPTPE--IFN-ALPTY---DTLLEQ-LCDYDLLGFQTEND 190 (482)
T ss_dssp CCTTCEEEEESGGG---TTHHHHHHHTTCCSCEEEECCSCCCCHH--HHT-TSTTH---HHHHHH-HTTSSEEEESSHHH
T ss_pred cCCCCEEEEECchH---HHHHHHHHHhCCCCcEEEEEcCCCCCHH--HHh-hCccH---HHHHHh-hhccCeEEEECHHH
Confidence 35689999998532 223444444 347999999998521110 001 11111 011111 12567777777655
Q ss_pred HHHHHHH-----------------hC--CceEEEeCCCC-CCCCCCCh----HHHHHHHHhhhhccCCCCCccccccccc
Q 011969 178 QHELAQN-----------------WG--IKATVLYDQPP-EFFHPTSL----EEKHELFCRLNKILHQPLGVQDCVSNAG 233 (474)
Q Consensus 178 ~~~l~~~-----------------~~--~~~~vi~n~~~-~~f~~~~~----~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 233 (474)
.+.+... ++ .++.++|||.+ +.|.+... .+..+++++++
T Consensus 191 ~~~f~~~~~~~l~~~~~~~~~~~~~g~~~~v~vip~GID~~~f~~~~~~~~~~~~~~lr~~~~----------------- 253 (482)
T 1uqt_A 191 RLAFLDCLSNLTRVTTRSAKSHTAWGKAFRTEVYPIGIEPKEIAKQAAGPLPPKLAQLKAELK----------------- 253 (482)
T ss_dssp HHHHHHHHHHHSCEEEETTTEEEETTEEEEEEECCCCCCHHHHHHHHHSCCCHHHHHHHHHTT-----------------
T ss_pred HHHHHHHHHHHhCCccccCCeEEECCeEEEEEEEeccCCHHHHHHHhcCcchHHHHHHHHHhC-----------------
Confidence 5443321 12 23778888854 44432100 00233444432
Q ss_pred cCCcCcchhhhhcccccccccCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccc
Q 011969 234 MEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQY 313 (474)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (474)
++ .+|+++||+.+.||++.+++|+..+.++
T Consensus 254 -----------------------~~-~vil~VgRl~~~Kgi~~ll~A~~~ll~~-------------------------- 283 (482)
T 1uqt_A 254 -----------------------NV-QNIFSVERLDYSKGLPERFLAYEALLEK-------------------------- 283 (482)
T ss_dssp -----------------------TC-EEEEEECCBCGGGCHHHHHHHHHHHHHH--------------------------
T ss_pred -----------------------CC-EEEEEEeCCcccCCHHHHHHHHHHHHHh--------------------------
Confidence 23 3899999999999999999999998764
Q ss_pred cCC----CEEEEEEeCC-----CCh----HHHHHHHHHcC----C---CcEEEecCCCCcccHHHHHhcccEEEeeccCC
Q 011969 314 LYP----RLLFIITGKG-----PDK----ESYEEKIRRLR----L---KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSS 373 (474)
Q Consensus 314 ~~~----~~~l~ivG~g-----~~~----~~~~~~~~~l~----l---~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s 373 (474)
+| +++|+++|.+ ++. +++++.+.+++ . ..|.|+++.++.+++..+|+.||++|+ +|
T Consensus 284 -~p~~~~~v~Lv~vG~p~~~~~~~~~~l~~~l~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~---pS 359 (482)
T 1uqt_A 284 -YPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLV---TP 359 (482)
T ss_dssp -CGGGTTTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEE---CC
T ss_pred -CccccCcEEEEEEECCCccchHHHHHHHHHHHHHHHHHhhhcccCCCceEEEeCCCCCHHHHHHHHHHccEEEE---CC
Confidence 34 4889999953 222 33444444432 1 247776555999999999999999999 78
Q ss_pred CCCCCchHHHHHHhcCC-----cEEEecccccccccccCCcEEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Q 011969 374 SGLDLPMKVVDMFGCGL-----PVCAVSYSCIEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLE 446 (474)
Q Consensus 374 ~~e~~p~kv~Eama~G~-----PVia~~~~~~~e~v~~~~~G~l~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~ 446 (474)
..||||++++||||||+ |||+|+.+|..+.+. +|++++ |+++++++|..++++ ++++++++.+++++
T Consensus 360 ~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~l~---~g~lv~p~d~~~lA~ai~~lL~~---~~~~r~~~~~~~~~ 433 (482)
T 1uqt_A 360 LRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELT---SALIVNPYDRDEVAAALDRALTM---SLAERISRHAEMLD 433 (482)
T ss_dssp SSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTCT---TSEEECTTCHHHHHHHHHHHHTC---CHHHHHHHHHHHHH
T ss_pred CcccCCchHHHHHHhCCCCCCCCEEEECCCCCHHHhC---CeEEECCCCHHHHHHHHHHHHcC---CHHHHHHHHHHHHH
Confidence 89999999999999997 899999877777772 789986 799999999999985 56778888888888
Q ss_pred hccccchHHHHHHHHHHHHHHH
Q 011969 447 MGLSARWATEWEEHAKPLITEV 468 (474)
Q Consensus 447 ~~~~~~w~~~~~~~~~~~~~~~ 468 (474)
....++|+. |.+.....++++
T Consensus 434 ~v~~~s~~~-~a~~~l~~l~~~ 454 (482)
T 1uqt_A 434 VIVKNDINH-WQECFISDLKQI 454 (482)
T ss_dssp HHHHTCHHH-HHHHHHHHHHHS
T ss_pred HHHhCCHHH-HHHHHHHHHHhc
Confidence 777788765 544444444443
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.89 E-value=6.3e-23 Score=188.15 Aligned_cols=154 Identities=21% Similarity=0.199 Sum_probs=135.7
Q ss_pred ccCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCChHHH
Q 011969 253 FLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESY 332 (474)
Q Consensus 253 ~~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~~ 332 (474)
.++.+++ +++|+|++.+.||++.+++|+..+ ++++|+|+|.|++.+++
T Consensus 18 ~~~~~~~-~i~~~G~~~~~Kg~~~li~a~~~l-------------------------------~~~~l~i~G~~~~~~~l 65 (177)
T 2f9f_A 18 KFKCYGD-FWLSVNRIYPEKRIELQLEVFKKL-------------------------------QDEKLYIVGWFSKGDHA 65 (177)
T ss_dssp CCCCCCS-CEEEECCSSGGGTHHHHHHHHHHC-------------------------------TTSCEEEEBCCCTTSTH
T ss_pred ccCCCCC-EEEEEeccccccCHHHHHHHHHhC-------------------------------CCcEEEEEecCccHHHH
Confidence 3555666 789999999999999999999875 56899999999988889
Q ss_pred HHHHH--HcCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecccccccccccCCc
Q 011969 333 EEKIR--RLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKN 409 (474)
Q Consensus 333 ~~~~~--~l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~~~~e~v~~~~~ 409 (474)
++.++ ++++ ++|.|.|. ++.+++..+|+.||++++ ++..|++|++++|||+||+|||+++.++..|++.++.+
T Consensus 66 ~~~~~~~~~~l~~~v~~~g~-~~~~e~~~~~~~adi~v~---ps~~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~ 141 (177)
T 2f9f_A 66 ERYARKIMKIAPDNVKFLGS-VSEEELIDLYSRCKGLLC---TAKDEDFGLTPIEAMASGKPVIAVNEGGFKETVINEKT 141 (177)
T ss_dssp HHHHHHHHHHSCTTEEEEES-CCHHHHHHHHHHCSEEEE---CCSSCCSCHHHHHHHHTTCCEEEESSHHHHHHCCBTTT
T ss_pred HHHHHhhhcccCCcEEEeCC-CCHHHHHHHHHhCCEEEe---CCCcCCCChHHHHHHHcCCcEEEeCCCCHHHHhcCCCc
Confidence 99999 7778 69999998 999999999999999999 67789999999999999999999999999999999999
Q ss_pred EEEe-CCHHHHHHHHHHHHhCCCCCHHH-HHHHHHHHHH
Q 011969 410 GLLF-SSSSELADQLLMLFKGFPDDSDV-LKKLRNGTLE 446 (474)
Q Consensus 410 G~l~-~~~~~la~~i~~l~~~~~~~~~~-~~~~~~~~~~ 446 (474)
|+++ .|+++++++|.+++++ ++. ++++++++++
T Consensus 142 g~~~~~d~~~l~~~i~~l~~~----~~~~~~~~~~~a~~ 176 (177)
T 2f9f_A 142 GYLVNADVNEIIDAMKKVSKN----PDKFKKDCFRRAKE 176 (177)
T ss_dssp EEEECSCHHHHHHHHHHHHHC----TTTTHHHHHHHHHT
T ss_pred cEEeCCCHHHHHHHHHHHHhC----HHHHHHHHHHHHhc
Confidence 9998 5799999999999986 333 5666666653
|
| >2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=5.9e-22 Score=203.59 Aligned_cols=236 Identities=16% Similarity=0.127 Sum_probs=169.9
Q ss_pred CCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhhhcCEEEEeCHHHHH
Q 011969 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179 (474)
Q Consensus 100 ~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~ 179 (474)
.+||++|++.+..++.. +..+.+ |+++..+.+ .... +.+.+++.+|.++++|+..++
T Consensus 110 ~~pDiv~~~~~~~~~~~-----~~~~~~-p~~~~~~~~---------~~~~--------~~~~~~~~~d~ii~~S~~~~~ 166 (374)
T 2xci_A 110 SKPKALIVVEREFWPSL-----IIFTKV-PKILVNAYA---------KGSL--------IEKILSKKFDLIIMRTQEDVE 166 (374)
T ss_dssp HCCSEEEEESCCCCHHH-----HHHCCS-CEEEEEECC---------CCCH--------HHHHHHTTCSEEEESCHHHHH
T ss_pred hCCCEEEEECccCcHHH-----HHHHhC-CEEEEEeec---------CchH--------HHHHHHHhCCEEEECCHHHHH
Confidence 68999998765444433 122333 766543332 1111 445667889999999999999
Q ss_pred HHHHHhCC-ceEEEeCCCCCCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhcccccccccCCCC
Q 011969 180 ELAQNWGI-KATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKPNR 258 (474)
Q Consensus 180 ~l~~~~~~-~~~vi~n~~~~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (474)
.+.+. |. ++.+++|+. |.+.... . . .+ ..
T Consensus 167 ~l~~~-g~~ki~vi~n~~---f~~~~~~-~----~---------------------------------------~l--~~ 196 (374)
T 2xci_A 167 KFKTF-GAKRVFSCGNLK---FICQKGK-G----I---------------------------------------KL--KG 196 (374)
T ss_dssp HHHTT-TCCSEEECCCGG---GCCCCCS-C----C---------------------------------------CC--SS
T ss_pred HHHHc-CCCeEEEcCCCc---cCCCcCh-h----h---------------------------------------hh--cC
Confidence 98774 65 477887751 2221100 0 0 01 11
Q ss_pred CeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCCh-HHHHHHHH
Q 011969 259 PALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK-ESYEEKIR 337 (474)
Q Consensus 259 ~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~-~~~~~~~~ 337 (474)
+ +++++|+ ..||++.|++|++.+.+ ..|+++|+|+|+|++. +++++.++
T Consensus 197 ~-vi~~~~~--~~k~~~~ll~A~~~l~~---------------------------~~p~~~lvivG~g~~~~~~l~~~~~ 246 (374)
T 2xci_A 197 E-FIVAGSI--HTGEVEIILKAFKEIKK---------------------------TYSSLKLILVPRHIENAKIFEKKAR 246 (374)
T ss_dssp C-EEEEEEE--CGGGHHHHHHHHHHHHT---------------------------TCTTCEEEEEESSGGGHHHHHHHHH
T ss_pred C-EEEEEeC--CCchHHHHHHHHHHHHh---------------------------hCCCcEEEEECCCHHHHHHHHHHHH
Confidence 3 5666665 35799999999999876 3689999999999887 58999999
Q ss_pred HcCCC---------cEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEe-ccccccccccc-
Q 011969 338 RLRLK---------RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV-SYSCIEELVKV- 406 (474)
Q Consensus 338 ~l~l~---------~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~-~~~~~~e~v~~- 406 (474)
++++. +|.+.|. .+|+..+|+.||++++| +|..+.+|++++||||||+|||++ +.++..|++.+
T Consensus 247 ~~gl~~~~~~~~~~~v~~~~~---~~dl~~~y~~aDv~vl~--ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~ 321 (374)
T 2xci_A 247 DFGFKTSFFENLEGDVILVDR---FGILKELYPVGKIAIVG--GTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFL 321 (374)
T ss_dssp HTTCCEEETTCCCSSEEECCS---SSCHHHHGGGEEEEEEC--SSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHH
T ss_pred HCCCceEEecCCCCcEEEECC---HHHHHHHHHhCCEEEEC--CcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHH
Confidence 99874 5777775 68999999999999985 445566889999999999999985 67888887754
Q ss_pred --CCcEEEeCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc
Q 011969 407 --DKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG 448 (474)
Q Consensus 407 --~~~G~l~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~ 448 (474)
.+.++.+.|+++|+++|..+++ | +.+++|++++++.+
T Consensus 322 ~~~G~l~~~~d~~~La~ai~~ll~----d-~~r~~mg~~ar~~~ 360 (374)
T 2xci_A 322 EKEGAGFEVKNETELVTKLTELLS----V-KKEIKVEEKSREIK 360 (374)
T ss_dssp HHTTCEEECCSHHHHHHHHHHHHH----S-CCCCCHHHHHHHHH
T ss_pred HHCCCEEEeCCHHHHHHHHHHHHh----H-HHHHHHHHHHHHHH
Confidence 3334444689999999999998 5 56778888888754
|
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=5e-19 Score=187.79 Aligned_cols=268 Identities=11% Similarity=-0.026 Sum_probs=181.6
Q ss_pred CCCEEEEeCCCChhHHHHHHHHH-hhCCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhhhcCEEEEeCHHHHH
Q 011969 101 SPDVFLVQNPPSVPTLVAVKWAS-SLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179 (474)
Q Consensus 101 ~~Dvi~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~ 179 (474)
.-|+|++|+.+.++ +...++ +..+.++.+.+|-...+.. .+ +.-+.. .-..+-+-+ -.||.|..-+....+
T Consensus 149 ~~D~VwVhDYhL~l---lp~~lR~~~~~~~igfFlHiPfPs~e--~f-~~Lp~~-~r~ell~gl-l~~DligF~t~~y~~ 220 (496)
T 3t5t_A 149 ADPVYLVHDYQLVG---VPALLREQRPDAPILLFVHIPWPSAD--YW-RILPKE-IRTGILHGM-LPATTIGFFADRWCR 220 (496)
T ss_dssp SSCEEEEESGGGTT---HHHHHHHHCTTSCEEEECCSCCCCHH--HH-TTSCHH-HHHHHHHHH-TTSSEEEESSHHHHH
T ss_pred CCCEEEEeCccHhH---HHHHHHhhCCCCeEEEEEcCCCCCHH--HH-hhCcHh-HHHHHHHHH-HhCCEEEEecHHHHH
Confidence 57899999954332 233344 3557889999997621110 01 111100 001222222 379999999997776
Q ss_pred HHHH----Hh-CC----------------ceEEEeCC-CCCCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCc
Q 011969 180 ELAQ----NW-GI----------------KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQ 237 (474)
Q Consensus 180 ~l~~----~~-~~----------------~~~vi~n~-~~~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 237 (474)
.+.+ .. |. ++.++|+| +++.|.+...+.+.+++++++
T Consensus 221 ~Fl~~~~r~l~g~~~~~~~~~v~~~gr~v~v~viP~GID~~~f~~~~~~~~~~lr~~~~--------------------- 279 (496)
T 3t5t_A 221 NFLESVADLLPDARIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGRNPQLPEGIEEWAD--------------------- 279 (496)
T ss_dssp HHHHHHHHHCTTCEEETTTTEEEETTEEEEEEECCCCBCGGGC----CCCCTTHHHHHT---------------------
T ss_pred HHHHHHHHHhcCCcccccCCeEEECCEEEEEEEeccEeCHHHhchhhHHHHHHHHHHhC---------------------
Confidence 5432 22 21 25678888 445665543211123333333
Q ss_pred CcchhhhhcccccccccCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCC-
Q 011969 238 KADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYP- 316 (474)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 316 (474)
++ .+|+++||+.+.||++.+++|+ .+.++ +|
T Consensus 280 -------------------~~-~lIl~VgRLd~~KGi~~lL~Af-~ll~~---------------------------~P~ 311 (496)
T 3t5t_A 280 -------------------GH-RLVVHSGRTDPIKNAERAVRAF-VLAAR---------------------------GGG 311 (496)
T ss_dssp -------------------TS-EEEEEEEESSGGGCHHHHHHHH-HHHHH---------------------------TSS
T ss_pred -------------------Cc-eEEEEcccCccccCHHHHHHHH-HHHHh---------------------------Ccc
Confidence 22 3899999999999999999999 77653 45
Q ss_pred --CEEEEEEeC-----CCChHHH----HHHHHHcCC----CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchH
Q 011969 317 --RLLFIITGK-----GPDKESY----EEKIRRLRL----KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMK 381 (474)
Q Consensus 317 --~~~l~ivG~-----g~~~~~~----~~~~~~l~l----~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~k 381 (474)
++.|+++|. +++.+++ ++++.+++. ..|.|+|. ++.+++..+|+.||++|+ +|..||||++
T Consensus 312 ~~~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~g~~~V~f~g~-v~~~el~aly~~ADv~vv---~SlrEGfgLv 387 (496)
T 3t5t_A 312 LEKTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGSDTVRIDND-NDVNHTIACFRRADLLIF---NSTVDGQNLS 387 (496)
T ss_dssp CTTEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEC-CCHHHHHHHHHHCSEEEE---CCSSBSCCSH
T ss_pred cceEEEEEEECCCCCCchHHHHHHHHHHHHHHHhccccCCcCEEEeCC-CCHHHHHHHHHhccEEEE---CcccccCChh
Confidence 467888873 3333333 444444332 26999998 999999999999999999 7999999999
Q ss_pred HHHHHhcC---CcEEEecccccccccccCCcEEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchH
Q 011969 382 VVDMFGCG---LPVCAVSYSCIEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWA 454 (474)
Q Consensus 382 v~Eama~G---~PVia~~~~~~~e~v~~~~~G~l~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~ 454 (474)
.+|||||| .|+|.|..+|..+.+. .+|++++ |+++++++|..+++. ++++++++.+..++..+++++.
T Consensus 388 ~~EamA~~~~~g~lVlSe~aGa~~~l~--~~allVnP~D~~~lA~AI~~aL~m---~~~er~~r~~~~~~~V~~~d~~ 460 (496)
T 3t5t_A 388 TFEAPLVNERDADVILSETCGAAEVLG--EYCRSVNPFDLVEQAEAISAALAA---GPRQRAEAAARRRDAARPWTLE 460 (496)
T ss_dssp HHHHHHHCSSCCEEEEETTBTTHHHHG--GGSEEECTTBHHHHHHHHHHHHHC---CHHHHHHHHHHHHHHHTTCBHH
T ss_pred HHHHHHhCCCCCCEEEeCCCCCHHHhC--CCEEEECCCCHHHHHHHHHHHHcC---CHHHHHHHHHHHHHHHHHCCHH
Confidence 99999997 8999999888888773 4789996 799999999999996 5677788788888877666553
|
| >3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.83 E-value=8.2e-19 Score=179.55 Aligned_cols=326 Identities=17% Similarity=0.146 Sum_probs=193.7
Q ss_pred ceEEEEEeCCCCCCchHHHHHHHHHhhCCCeEEEEecCCCCCCcceeccCCeEEEEeecCCCCCCCCCchhHHHHHHHHH
Q 011969 5 GRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKP 84 (474)
Q Consensus 5 ~~~~i~~~~~~g~~~r~~~~a~~l~~~~g~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (474)
++++|...|.=|+-.+..-.|..|.++ ||+|.+++.... .........|++++.++......+.... .+..+.++
T Consensus 3 ~~i~i~~GGTgGHi~palala~~L~~~-g~~V~~vg~~~g-~e~~~v~~~g~~~~~i~~~~~~~~~~~~---~~~~~~~~ 77 (365)
T 3s2u_A 3 GNVLIMAGGTGGHVFPALACAREFQAR-GYAVHWLGTPRG-IENDLVPKAGLPLHLIQVSGLRGKGLKS---LVKAPLEL 77 (365)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHT-TCEEEEEECSSS-THHHHTGGGTCCEEECC-----------------CHHHH
T ss_pred CcEEEEcCCCHHHHHHHHHHHHHHHhC-CCEEEEEECCch-HhhchhhhcCCcEEEEECCCcCCCCHHH---HHHHHHHH
Confidence 356654443212223344456677775 999999985432 2233455568888888732221111111 11112222
Q ss_pred HHHHHHHHHHHhhhcCCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHh
Q 011969 85 LIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYG 164 (474)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 164 (474)
+..+... +.++ +..+||+|++.... .+. .+.+++++.++|++++-+|.. .+ ...+++.
T Consensus 78 ~~~~~~~-~~~l-~~~~PDvVi~~g~~--~s~-p~~laA~~~~iP~vihe~n~~-------~G----------~~nr~l~ 135 (365)
T 3s2u_A 78 LKSLFQA-LRVI-RQLRPVCVLGLGGY--VTG-PGGLAARLNGVPLVIHEQNAV-------AG----------TANRSLA 135 (365)
T ss_dssp HHHHHHH-HHHH-HHHCCSEEEECSSS--THH-HHHHHHHHTTCCEEEEECSSS-------CC----------HHHHHHG
T ss_pred HHHHHHH-HHHH-HhcCCCEEEEcCCc--chH-HHHHHHHHcCCCEEEEecchh-------hh----------hHHHhhc
Confidence 2221111 1222 23799999988642 233 355667888999997665541 11 2345567
Q ss_pred hhcCEEEEeCHHHHHHHHHHhCCceEEEeCCCC-CCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhh
Q 011969 165 KMANGCLCVTQAMQHELAQNWGIKATVLYDQPP-EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETI 243 (474)
Q Consensus 165 ~~ad~vi~vS~~~~~~l~~~~~~~~~vi~n~~~-~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (474)
+.|+.+++..+.... ...+..+..+... +.+....
T Consensus 136 ~~a~~v~~~~~~~~~-----~~~k~~~~g~pvr~~~~~~~~--------------------------------------- 171 (365)
T 3s2u_A 136 PIARRVCEAFPDTFP-----ASDKRLTTGNPVRGELFLDAH--------------------------------------- 171 (365)
T ss_dssp GGCSEEEESSTTSSC-----C---CEECCCCCCGGGCCCTT---------------------------------------
T ss_pred cccceeeeccccccc-----CcCcEEEECCCCchhhccchh---------------------------------------
Confidence 889988776553210 0112333333221 1111110
Q ss_pred hhcccccccccCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEE-EE
Q 011969 244 FTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLF-II 322 (474)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~i 322 (474)
....+.++++.++++.|+.+..+..+.+.+++..+.. ..++.+ ++
T Consensus 172 ------~~~~~~~~~~~ilv~gGs~g~~~~~~~~~~al~~l~~----------------------------~~~~~vi~~ 217 (365)
T 3s2u_A 172 ------ARAPLTGRRVNLLVLGGSLGAEPLNKLLPEALAQVPL----------------------------EIRPAIRHQ 217 (365)
T ss_dssp ------SSCCCTTSCCEEEECCTTTTCSHHHHHHHHHHHTSCT----------------------------TTCCEEEEE
T ss_pred ------hhcccCCCCcEEEEECCcCCccccchhhHHHHHhccc----------------------------ccceEEEEe
Confidence 0012345667788888999888777888888877643 123444 44
Q ss_pred EeCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEeccccc--
Q 011969 323 TGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI-- 400 (474)
Q Consensus 323 vG~g~~~~~~~~~~~~l~l~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~~~-- 400 (474)
+|.+ +.+.+.+..+.++. ++.+.++ .+|+..+|..||++|+ ..| ++++.|+|++|+|+|..+.+..
T Consensus 218 ~G~~-~~~~~~~~~~~~~~-~~~v~~f---~~dm~~~l~~aDlvI~----raG---~~Tv~E~~a~G~P~Ilip~p~~~~ 285 (365)
T 3s2u_A 218 AGRQ-HAEITAERYRTVAV-EADVAPF---ISDMAAAYAWADLVIC----RAG---ALTVSELTAAGLPAFLVPLPHAID 285 (365)
T ss_dssp CCTT-THHHHHHHHHHTTC-CCEEESC---CSCHHHHHHHCSEEEE----CCC---HHHHHHHHHHTCCEEECC-----C
T ss_pred cCcc-ccccccceeccccc-ccccccc---hhhhhhhhccceEEEe----cCC---cchHHHHHHhCCCeEEeccCCCCC
Confidence 5543 45566666676664 6777887 5899999999999997 233 6799999999999998875432
Q ss_pred ------ccccccCCcEEEeC----CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhcccc
Q 011969 401 ------EELVKVDKNGLLFS----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSA 451 (474)
Q Consensus 401 ------~e~v~~~~~G~l~~----~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (474)
++.+.+.+.|++++ ++++|+++|.+++++ ++.+++|++++++.+...
T Consensus 286 ~~Q~~NA~~l~~~G~a~~l~~~~~~~~~L~~~i~~ll~d----~~~~~~m~~~a~~~~~~~ 342 (365)
T 3s2u_A 286 DHQTRNAEFLVRSGAGRLLPQKSTGAAELAAQLSEVLMH----PETLRSMADQARSLAKPE 342 (365)
T ss_dssp CHHHHHHHHHHTTTSEEECCTTTCCHHHHHHHHHHHHHC----THHHHHHHHHHHHTCCTT
T ss_pred cHHHHHHHHHHHCCCEEEeecCCCCHHHHHHHHHHHHCC----HHHHHHHHHHHHhcCCcc
Confidence 24466667888875 588999999999995 899999999999976444
|
| >3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=7.7e-19 Score=179.97 Aligned_cols=338 Identities=13% Similarity=0.037 Sum_probs=205.8
Q ss_pred ceEEEEEeCCCCCCchHHHHHHHHHhhCCCeEEEEecCCCCCCcceeccCCeEEEEeecC-------------CC-CCC-
Q 011969 5 GRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQW-------------PT-IPR- 69 (474)
Q Consensus 5 ~~~~i~~~~~~g~~~r~~~~a~~l~~~~g~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~-------------~~-~~~- 69 (474)
.+++++..+..|...++...+..|.++ ||+|++++... ........|++++.++.. .. ...
T Consensus 21 MrIl~~~~~~~Gh~~~~~~la~~L~~~-GheV~v~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (412)
T 3otg_A 21 MRVLFASLGTHGHTYPLLPLATAARAA-GHEVTFATGEG---FAGTLRKLGFEPVATGMPVFDGFLAALRIRFDTDSPEG 96 (412)
T ss_dssp CEEEEECCSSHHHHGGGHHHHHHHHHT-TCEEEEEECGG---GHHHHHHTTCEEEECCCCHHHHHHHHHHHHHSCSCCTT
T ss_pred eEEEEEcCCCcccHHHHHHHHHHHHHC-CCEEEEEccHH---HHHHHHhcCCceeecCcccccchhhhhhhhhcccCCcc
Confidence 356666666556566677788899886 99999999653 234455678999988720 00 000
Q ss_pred -C-CCchhHHHHHHHHH-HHHHHHHHHHHhhhcCCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhcc
Q 011969 70 -G-LPKVLKPVLLLLKP-LIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSL 146 (474)
Q Consensus 70 -~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~ 146 (474)
. ..........+... ......-+...+. ..+||+|+++.. .. .+.++++..++|+|+..|++..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~~pDvVv~~~~-~~----~~~~aa~~~giP~v~~~~~~~~------- 163 (412)
T 3otg_A 97 LTPEQLSELPQIVFGRVIPQRVFDELQPVIE-RLRPDLVVQEIS-NY----GAGLAALKAGIPTICHGVGRDT------- 163 (412)
T ss_dssp CCHHHHTTSHHHHHHTHHHHHHHHHHHHHHH-HHCCSEEEEETT-CH----HHHHHHHHHTCCEEEECCSCCC-------
T ss_pred CChhHhhHHHHHHHhccchHHHHHHHHHHHH-hcCCCEEEECch-hh----HHHHHHHHcCCCEEEecccccC-------
Confidence 0 00000011111111 0010111222222 268999988852 11 2445667788999999888631
Q ss_pred CCCchHHHHHHHHHHHHhh------------hcCEEEEeCHHHHHHHHHHhCCc-eEEEeCCCCCCCCCCChHHHHHHHH
Q 011969 147 GRRSHFVSIYRWIEKYYGK------------MANGCLCVTQAMQHELAQNWGIK-ATVLYDQPPEFFHPTSLEEKHELFC 213 (474)
Q Consensus 147 ~~~~~~~~~~~~~e~~~~~------------~ad~vi~vS~~~~~~l~~~~~~~-~~vi~n~~~~~f~~~~~~~~~~~~~ 213 (474)
.......+.+++.+...+ .+|.+++.+....+......... ..+.+.+.. ... .. .
T Consensus 164 -~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~--~~----~ 232 (412)
T 3otg_A 164 -PDDLTRSIEEEVRGLAQRLGLDLPPGRIDGFGNPFIDIFPPSLQEPEFRARPRRHELRPVPFA----EQG--DL----P 232 (412)
T ss_dssp -CSHHHHHHHHHHHHHHHHTTCCCCSSCCGGGGCCEEECSCGGGSCHHHHTCTTEEECCCCCCC----CCC--CC----C
T ss_pred -chhhhHHHHHHHHHHHHHcCCCCCcccccCCCCeEEeeCCHHhcCCcccCCCCcceeeccCCC----CCC--CC----C
Confidence 111122333344444333 56788888876665554433222 111111100 000 00 0
Q ss_pred hh-hhccCCCCCccccccccccCCcCcchhhhhcccccccccCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhh
Q 011969 214 RL-NKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAIL 292 (474)
Q Consensus 214 ~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~ 292 (474)
++ + ...++++.++++.|++. .++.+.+.+++..+.+
T Consensus 233 ~~~~------------------------------------~~~~~~~~vlv~~G~~~-~~~~~~~~~~~~~l~~------ 269 (412)
T 3otg_A 233 AWLS------------------------------------SRDTARPLVYLTLGTSS-GGTVEVLRAAIDGLAG------ 269 (412)
T ss_dssp GGGG------------------------------------GSCTTSCEEEEECTTTT-CSCHHHHHHHHHHHHT------
T ss_pred Cccc------------------------------------cccCCCCEEEEEcCCCC-cCcHHHHHHHHHHHHc------
Confidence 00 0 01355677888999996 6788888777777654
Q ss_pred ccCCCchhhHhHhhhcCCccccCCCEEEEEEeCC-CChHHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcccEEEeec
Q 011969 293 NEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKG-PDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLH 370 (474)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g-~~~~~~~~~~~~l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~ 370 (474)
. +.++++++++ +..+.++ ++ ++|.|.|. + ++..+|..||++|+
T Consensus 270 ----------------------~-~~~~~~~~g~~~~~~~l~------~~~~~v~~~~~-~---~~~~~l~~ad~~v~-- 314 (412)
T 3otg_A 270 ----------------------L-DADVLVASGPSLDVSGLG------EVPANVRLESW-V---PQAALLPHVDLVVH-- 314 (412)
T ss_dssp ----------------------S-SSEEEEECCSSCCCTTCC------CCCTTEEEESC-C---CHHHHGGGCSEEEE--
T ss_pred ----------------------C-CCEEEEEECCCCChhhhc------cCCCcEEEeCC-C---CHHHHHhcCcEEEE--
Confidence 2 3555555544 3233332 23 68999987 4 59999999999997
Q ss_pred cCCCCCCCchHHHHHHhcCCcEEEeccc----ccccccccCCcEEEeC----CHHHHHHHHHHHHhCCCCCHHHHHHHHH
Q 011969 371 TSSSGLDLPMKVVDMFGCGLPVCAVSYS----CIEELVKVDKNGLLFS----SSSELADQLLMLFKGFPDDSDVLKKLRN 442 (474)
Q Consensus 371 ~~s~~e~~p~kv~Eama~G~PVia~~~~----~~~e~v~~~~~G~l~~----~~~~la~~i~~l~~~~~~~~~~~~~~~~ 442 (474)
.+ | +++++|||++|+|+|+++.+ +..+.+.+.++|++++ |+++|+++|..++++ ++.+++|++
T Consensus 315 -~~-g---~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v~~~g~g~~~~~~~~~~~~l~~ai~~ll~~----~~~~~~~~~ 385 (412)
T 3otg_A 315 -HG-G---SGTTLGALGAGVPQLSFPWAGDSFANAQAVAQAGAGDHLLPDNISPDSVSGAAKRLLAE----ESYRAGARA 385 (412)
T ss_dssp -SC-C---HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECCGGGCCHHHHHHHHHHHHHC----HHHHHHHHH
T ss_pred -CC-c---hHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEecCcccCCHHHHHHHHHHHHhC----HHHHHHHHH
Confidence 33 2 36899999999999997654 4677888888999985 689999999999994 889999999
Q ss_pred HHHHhccccchHHHH
Q 011969 443 GTLEMGLSARWATEW 457 (474)
Q Consensus 443 ~~~~~~~~~~w~~~~ 457 (474)
.+.++....+|+...
T Consensus 386 ~~~~~~~~~~~~~~~ 400 (412)
T 3otg_A 386 VAAEIAAMPGPDEVV 400 (412)
T ss_dssp HHHHHHHSCCHHHHH
T ss_pred HHHHHhcCCCHHHHH
Confidence 999887677776544
|
| >3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.81 E-value=6e-19 Score=182.66 Aligned_cols=257 Identities=14% Similarity=0.134 Sum_probs=170.4
Q ss_pred CCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCchH-HHHHHHHHHHHhhhcCEEEEeCHHHH
Q 011969 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHF-VSIYRWIEKYYGKMANGCLCVTQAMQ 178 (474)
Q Consensus 100 ~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~ad~vi~vS~~~~ 178 (474)
.+||+|+++.... +.+.+.++++..++|++...++.. +....+++ .. ...+.+.+.+|.+++.|+..+
T Consensus 110 ~kPDvVi~~g~~~--~~~~~~~aa~~~~IPv~h~~ag~r------s~~~~~~~~~~---~~r~~~~~~a~~~~~~se~~~ 178 (396)
T 3dzc_A 110 EQPDVVLVHGDTA--TTFAASLAAYYQQIPVGHVEAGLR------TGNIYSPWPEE---GNRKLTAALTQYHFAPTDTSR 178 (396)
T ss_dssp HCCSEEEEETTSH--HHHHHHHHHHTTTCCEEEETCCCC------CSCTTSSTTHH---HHHHHHHHTCSEEEESSHHHH
T ss_pred cCCCEEEEECCch--hHHHHHHHHHHhCCCEEEEECCcc------ccccccCCcHH---HHHHHHHHhcCEEECCCHHHH
Confidence 7899999998533 223345677788999764333221 01111111 11 112234678999999999999
Q ss_pred HHHHHHhCCc---eEEEeCCCCCCCCCCChH--H----HHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhcccc
Q 011969 179 HELAQNWGIK---ATVLYDQPPEFFHPTSLE--E----KHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAG 249 (474)
Q Consensus 179 ~~l~~~~~~~---~~vi~n~~~~~f~~~~~~--~----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (474)
+.+.+ .|.+ +.++.|...+.+...... . +.++++++|.
T Consensus 179 ~~l~~-~G~~~~ki~vvGn~~~d~~~~~~~~~~~~~~~~~~~r~~lg~-------------------------------- 225 (396)
T 3dzc_A 179 ANLLQ-ENYNAENIFVTGNTVIDALLAVREKIHTDMDLQATLESQFPM-------------------------------- 225 (396)
T ss_dssp HHHHH-TTCCGGGEEECCCHHHHHHHHHHHHHHHCHHHHHHHHHTCTT--------------------------------
T ss_pred HHHHH-cCCCcCcEEEECCcHHHHHHHhhhhcccchhhHHHHHHHhCc--------------------------------
Confidence 88887 4764 666655321111110000 0 1334444440
Q ss_pred cccccCCCCCeEEEEEeecc-cCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEE-eCCC
Q 011969 250 IDVFLKPNRPALVVSSTSWT-PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIIT-GKGP 327 (474)
Q Consensus 250 ~~~~~~~~~~~~i~~~G~l~-~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iv-G~g~ 327 (474)
++++++++++++++.. ..++++.+++|+..+.++ +|++.+++. |.++
T Consensus 226 ----l~~~~~~vlv~~hR~~~~~~~~~~ll~A~~~l~~~---------------------------~~~~~~v~~~g~~~ 274 (396)
T 3dzc_A 226 ----LDASKKLILVTGHRRESFGGGFERICQALITTAEQ---------------------------HPECQILYPVHLNP 274 (396)
T ss_dssp ----CCTTSEEEEEECSCBCCCTTHHHHHHHHHHHHHHH---------------------------CTTEEEEEECCBCH
T ss_pred ----cCCCCCEEEEEECCcccchhHHHHHHHHHHHHHHh---------------------------CCCceEEEEeCCCh
Confidence 1244555566665543 347799999999998774 688999885 5443
Q ss_pred ChHHHHHHHHH-cCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEe-ccccccccc
Q 011969 328 DKESYEEKIRR-LRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV-SYSCIEELV 404 (474)
Q Consensus 328 ~~~~~~~~~~~-l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~-~~~~~~e~v 404 (474)
.+++.+++ ++. ++|.+.+. ++..++..+|+.||++|. +| | + ...|||+||+|||++ +.++..|++
T Consensus 275 ---~~~~~l~~~~~~~~~v~~~~~-lg~~~~~~l~~~ad~vv~---~S-G---g-~~~EA~a~G~PvV~~~~~~~~~e~v 342 (396)
T 3dzc_A 275 ---NVREPVNKLLKGVSNIVLIEP-QQYLPFVYLMDRAHIILT---DS-G---G-IQEEAPSLGKPVLVMRETTERPEAV 342 (396)
T ss_dssp ---HHHHHHHHHTTTCTTEEEECC-CCHHHHHHHHHHCSEEEE---SC-S---G-GGTTGGGGTCCEEECCSSCSCHHHH
T ss_pred ---HHHHHHHHHHcCCCCEEEeCC-CCHHHHHHHHHhcCEEEE---CC-c---c-HHHHHHHcCCCEEEccCCCcchHHH
Confidence 24444444 343 68999988 888899999999999988 45 3 2 348999999999998 678888888
Q ss_pred ccCCcEEEeC-CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc
Q 011969 405 KVDKNGLLFS-SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG 448 (474)
Q Consensus 405 ~~~~~G~l~~-~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~ 448 (474)
+.+ .+++++ |++++++++..++++ ++.+++|++++..+.
T Consensus 343 ~~G-~~~lv~~d~~~l~~ai~~ll~d----~~~~~~m~~~~~~~~ 382 (396)
T 3dzc_A 343 AAG-TVKLVGTNQQQICDALSLLLTD----PQAYQAMSQAHNPYG 382 (396)
T ss_dssp HHT-SEEECTTCHHHHHHHHHHHHHC----HHHHHHHHTSCCTTC
T ss_pred HcC-ceEEcCCCHHHHHHHHHHHHcC----HHHHHHHhhccCCCc
Confidence 766 578886 799999999999984 888899988765543
|
| >3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.78 E-value=6e-18 Score=175.67 Aligned_cols=265 Identities=16% Similarity=0.113 Sum_probs=172.3
Q ss_pred CCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCchH-HHHHHHHHHHHhhhcCEEEEeCHHHH
Q 011969 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHF-VSIYRWIEKYYGKMANGCLCVTQAMQ 178 (474)
Q Consensus 100 ~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~ad~vi~vS~~~~ 178 (474)
.+||+|+++..... .+.+.++++..++|++. .+.... +.....++ .. ...+.+.+.+|.+++.|+..+
T Consensus 113 ~kPD~Vi~~gd~~~--~l~~~laA~~~~IPv~h-~~aglr-----s~~~~~~~p~~---~~r~~~~~~a~~~~~~se~~~ 181 (403)
T 3ot5_A 113 ENPDIVLVHGDTTT--SFAAGLATFYQQKMLGH-VEAGLR-----TWNKYSPFPEE---MNRQLTGVMADIHFSPTKQAK 181 (403)
T ss_dssp HCCSEEEEETTCHH--HHHHHHHHHHTTCEEEE-ESCCCC-----CSCTTSSTTHH---HHHHHHHHHCSEEEESSHHHH
T ss_pred cCCCEEEEECCchh--HHHHHHHHHHhCCCEEE-EECCcc-----ccccccCCcHH---HHHHHHHHhcCEEECCCHHHH
Confidence 78999999985332 22345667788999653 432200 01111111 11 223345567999999999999
Q ss_pred HHHHHHhCCc---eEEEeCCCCC--CCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhcccccccc
Q 011969 179 HELAQNWGIK---ATVLYDQPPE--FFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVF 253 (474)
Q Consensus 179 ~~l~~~~~~~---~~vi~n~~~~--~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (474)
+.+.+. |.+ +.++.|...+ .+.+... .+.+.++ .
T Consensus 182 ~~l~~~-Gi~~~~i~vvGn~~~D~~~~~~~~~-~~~~~~~---------------------------------------~ 220 (403)
T 3ot5_A 182 ENLLAE-GKDPATIFVTGNTAIDALKTTVQKD-YHHPILE---------------------------------------N 220 (403)
T ss_dssp HHHHHT-TCCGGGEEECCCHHHHHHHHHSCTT-CCCHHHH---------------------------------------S
T ss_pred HHHHHc-CCCcccEEEeCCchHHHHHhhhhhh-cchHHHH---------------------------------------h
Confidence 988874 664 5555443111 0100000 0001110 0
Q ss_pred cCCCCCeEEEEEeeccc-CCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEE-eCCCChHH
Q 011969 254 LKPNRPALVVSSTSWTP-DEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIIT-GKGPDKES 331 (474)
Q Consensus 254 ~~~~~~~~i~~~G~l~~-~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iv-G~g~~~~~ 331 (474)
+ ++++++++++|+... .++++.+++|+..+.++ +|++.+++. |.++ .
T Consensus 221 l-~~~~~vlv~~~r~~~~~~~l~~ll~a~~~l~~~---------------------------~~~~~~v~~~~~~~---~ 269 (403)
T 3ot5_A 221 L-GDNRLILMTAHRRENLGEPMQGMFEAVREIVES---------------------------REDTELVYPMHLNP---A 269 (403)
T ss_dssp C-TTCEEEEECCCCHHHHTTHHHHHHHHHHHHHHH---------------------------CTTEEEEEECCSCH---H
T ss_pred c-cCCCEEEEEeCcccccCcHHHHHHHHHHHHHHh---------------------------CCCceEEEecCCCH---H
Confidence 1 344556677776533 46789999999998774 688999887 4333 2
Q ss_pred HHHHHHH-cCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEe-cccccccccccCC
Q 011969 332 YEEKIRR-LRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV-SYSCIEELVKVDK 408 (474)
Q Consensus 332 ~~~~~~~-l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~-~~~~~~e~v~~~~ 408 (474)
+++.+++ ++. ++|.+.+. ++..++..+|+.||++|. +| |....||++||+|+|++ +.++..|.++.+
T Consensus 270 ~~~~l~~~~~~~~~v~l~~~-l~~~~~~~l~~~ad~vv~---~S-----Gg~~~EA~a~g~PvV~~~~~~~~~e~v~~g- 339 (403)
T 3ot5_A 270 VREKAMAILGGHERIHLIEP-LDAIDFHNFLRKSYLVFT---DS-----GGVQEEAPGMGVPVLVLRDTTERPEGIEAG- 339 (403)
T ss_dssp HHHHHHHHHTTCTTEEEECC-CCHHHHHHHHHHEEEEEE---CC-----HHHHHHGGGTTCCEEECCSSCSCHHHHHHT-
T ss_pred HHHHHHHHhCCCCCEEEeCC-CCHHHHHHHHHhcCEEEE---CC-----ccHHHHHHHhCCCEEEecCCCcchhheeCC-
Confidence 3444444 343 68999998 888899999999999987 44 23448999999999998 678888887555
Q ss_pred cEEEeC-CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHHHHHH
Q 011969 409 NGLLFS-SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLI 465 (474)
Q Consensus 409 ~G~l~~-~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 465 (474)
+|++++ |++++++++..++++ ++.+++|++++..+.... .++++++.+.
T Consensus 340 ~~~lv~~d~~~l~~ai~~ll~~----~~~~~~m~~~~~~~g~~~----aa~rI~~~l~ 389 (403)
T 3ot5_A 340 TLKLIGTNKENLIKEALDLLDN----KESHDKMAQAANPYGDGF----AANRILAAIK 389 (403)
T ss_dssp SEEECCSCHHHHHHHHHHHHHC----HHHHHHHHHSCCTTCCSC----HHHHHHHHHH
T ss_pred cEEEcCCCHHHHHHHHHHHHcC----HHHHHHHHhhcCcccCCc----HHHHHHHHHH
Confidence 899986 899999999999984 888899987665544333 4444444443
|
| >2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=99.77 E-value=7.7e-17 Score=166.60 Aligned_cols=151 Identities=17% Similarity=0.165 Sum_probs=107.0
Q ss_pred CCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEE-EEEeCCCChHHHHH
Q 011969 256 PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLF-IITGKGPDKESYEE 334 (474)
Q Consensus 256 ~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~ivG~g~~~~~~~~ 334 (474)
++++.++++.|++. .++.+.+.+++..+.+ .+++++ +++|++++.+.++
T Consensus 230 ~~~~~v~v~~Gs~~-~~~~~~~~~~~~~l~~----------------------------~~~~~~~~~~G~~~~~~~l~- 279 (430)
T 2iyf_A 230 GAEKVVLVSLGSAF-TKQPAFYRECVRAFGN----------------------------LPGWHLVLQIGRKVTPAELG- 279 (430)
T ss_dssp TCSEEEEEECTTTC-C-CHHHHHHHHHHHTT----------------------------CTTEEEEEECC---CGGGGC-
T ss_pred CCCCeEEEEcCCCC-CCcHHHHHHHHHHHhc----------------------------CCCeEEEEEeCCCCChHHhc-
Confidence 34566888999998 5565555555554422 246777 5789887655432
Q ss_pred HHHHcCCCcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecccc----cccccccCCcE
Q 011969 335 KIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVDKNG 410 (474)
Q Consensus 335 ~~~~l~l~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~~----~~e~v~~~~~G 410 (474)
.+ .++|.+.|. ++.. .+|..||++|. .+ | +++++|||++|+|+|+++..+ ..+.+.+.+.|
T Consensus 280 ---~~-~~~v~~~~~-~~~~---~~l~~ad~~v~---~~-G---~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~~g~g 344 (430)
T 2iyf_A 280 ---EL-PDNVEVHDW-VPQL---AILRQADLFVT---HA-G---AGGSQEGLATATPMIAVPQAVDQFGNADMLQGLGVA 344 (430)
T ss_dssp ---SC-CTTEEEESS-CCHH---HHHTTCSEEEE---CC-C---HHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSE
T ss_pred ---cC-CCCeEEEec-CCHH---HHhhccCEEEE---CC-C---ccHHHHHHHhCCCEEECCCccchHHHHHHHHHcCCE
Confidence 12 168999986 6654 78999999887 22 2 368999999999999997644 45667778899
Q ss_pred EEeC----CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHH
Q 011969 411 LLFS----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWAT 455 (474)
Q Consensus 411 ~l~~----~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~ 455 (474)
+.++ ++++++++|.+++++ ++.++++++.+.++.....|+.
T Consensus 345 ~~~~~~~~~~~~l~~~i~~ll~~----~~~~~~~~~~~~~~~~~~~~~~ 389 (430)
T 2iyf_A 345 RKLATEEATADLLRETALALVDD----PEVARRLRRIQAEMAQEGGTRR 389 (430)
T ss_dssp EECCCC-CCHHHHHHHHHHHHHC----HHHHHHHHHHHHHHHHHCHHHH
T ss_pred EEcCCCCCCHHHHHHHHHHHHcC----HHHHHHHHHHHHHHHhcCcHHH
Confidence 9986 689999999999984 8888888888887664444443
|
| >4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=1.1e-16 Score=164.00 Aligned_cols=150 Identities=12% Similarity=0.067 Sum_probs=100.9
Q ss_pred CCCCeEEEEEeecccCC----------CHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeC
Q 011969 256 PNRPALVVSSTSWTPDE----------DFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGK 325 (474)
Q Consensus 256 ~~~~~~i~~~G~l~~~k----------~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~ 325 (474)
++++.+++++|++...+ .+..+++++..+ +++++++|+
T Consensus 225 ~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~--------------------------------~~~~v~~~~ 272 (398)
T 4fzr_A 225 RKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKL--------------------------------GFEVVVAVS 272 (398)
T ss_dssp CSSCEEECC----------------CCSHHHHHHHGGGG--------------------------------TCEEEECCC
T ss_pred CCCCEEEEEccCcccccccccccchHHHHHHHHHHHHhC--------------------------------CCEEEEEeC
Confidence 45667888999997554 344444444332 478888887
Q ss_pred CCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEec----ccccc
Q 011969 326 GPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS----YSCIE 401 (474)
Q Consensus 326 g~~~~~~~~~~~~l~l~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~----~~~~~ 401 (474)
+++.+.+. .+ .++|.+.|. + ++..++..||++|. .+ -+.++.|||++|+|+|+.. ..+..
T Consensus 273 ~~~~~~l~----~~-~~~v~~~~~-~---~~~~ll~~ad~~v~---~g----G~~t~~Ea~~~G~P~v~~p~~~~q~~~a 336 (398)
T 4fzr_A 273 DKLAQTLQ----PL-PEGVLAAGQ-F---PLSAIMPACDVVVH---HG----GHGTTLTCLSEGVPQVSVPVIAEVWDSA 336 (398)
T ss_dssp C------------C-CTTEEEESC-C---CHHHHGGGCSEEEE---CC----CHHHHHHHHHTTCCEEECCCSGGGHHHH
T ss_pred Ccchhhhc----cC-CCcEEEeCc-C---CHHHHHhhCCEEEe---cC----CHHHHHHHHHhCCCEEecCCchhHHHHH
Confidence 76543332 22 269999987 5 47889999999997 22 2568999999999999954 44677
Q ss_pred cccccCCcEEEeC----CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHH
Q 011969 402 ELVKVDKNGLLFS----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEW 457 (474)
Q Consensus 402 e~v~~~~~G~l~~----~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~ 457 (474)
+.+.+.+.|++++ ++++|+++|.+++++ ++.++++++.+.++.....|+...
T Consensus 337 ~~~~~~g~g~~~~~~~~~~~~l~~ai~~ll~~----~~~~~~~~~~~~~~~~~~~~~~~~ 392 (398)
T 4fzr_A 337 RLLHAAGAGVEVPWEQAGVESVLAACARIRDD----SSYVGNARRLAAEMATLPTPADIV 392 (398)
T ss_dssp HHHHHTTSEEECC-------CHHHHHHHHHHC----THHHHHHHHHHHHHTTSCCHHHHH
T ss_pred HHHHHcCCEEecCcccCCHHHHHHHHHHHHhC----HHHHHHHHHHHHHHHcCCCHHHHH
Confidence 7888889999986 688999999999995 888999999999887677766543
|
| >3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} | Back alignment and structure |
|---|
Probab=99.70 E-value=2e-15 Score=153.57 Aligned_cols=350 Identities=13% Similarity=0.063 Sum_probs=190.1
Q ss_pred CceEEEEEeCCCCCCchHHHHHHHHHhhCCCeEEEEecCCCCCCcceeccCCeEEEEeecCCCCC-----CCCCchhHHH
Q 011969 4 RGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIP-----RGLPKVLKPV 78 (474)
Q Consensus 4 ~~~~~i~~~~~~g~~~r~~~~a~~l~~~~g~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~-----~~~~~~~~~~ 78 (474)
|++++++..+..|+..++...+..|.++ ||+|++++... ..+.....|+.++.++...... .........+
T Consensus 4 M~~il~~~~~~~Ghv~~~~~La~~L~~~-GheV~v~~~~~---~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (402)
T 3ia7_A 4 QRHILFANVQGHGHVYPSLGLVSELARR-GHRITYVTTPL---FADEVKAAGAEVVLYKSEFDTFHVPEVVKQEDAETQL 79 (402)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHHHHT-TCEEEEEECHH---HHHHHHHTTCEEEECCCGGGTSSSSSSSCCTTHHHHH
T ss_pred CCEEEEEeCCCCcccccHHHHHHHHHhC-CCEEEEEcCHH---HHHHHHHcCCEEEecccccccccccccccccchHHHH
Confidence 4457777777677777888888999986 99999999532 1233445688888887321100 0011111111
Q ss_pred HH-HHHHHHHHHHHHHHHhhhcCCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhh-------ccCCCc
Q 011969 79 LL-LLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSL-------SLGRRS 150 (474)
Q Consensus 79 ~~-~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~-------~~~~~~ 150 (474)
.. +.........-+...+ +..+||+||++++.. ..+.++++..++|++...|++..+.... ......
T Consensus 80 ~~~~~~~~~~~~~~l~~~l-~~~~pD~Vi~d~~~~----~~~~~aA~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (402)
T 3ia7_A 80 HLVYVRENVAILRAAEEAL-GDNPPDLVVYDVFPF----IAGRLLAARWDRPAVRLTGGFAANEHYSLFKELWKSNGQRH 154 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHH-TTCCCSEEEEESTTH----HHHHHHHHHHTCCEEEEESSCCCBTTBCHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHHHHHHHH-hccCCCEEEECchHH----HHHHHHHHhhCCCEEEEecccccCccccccccccccccccC
Confidence 11 1222212122222233 237999999985221 2345566778899999887764211000 000001
Q ss_pred h--HHHHHHHHHHHHhhh------------c-CEEEEeCHHHHHHHHHHhCCceEEEeCCCCCCCCCCChHHHHHHHHhh
Q 011969 151 H--FVSIYRWIEKYYGKM------------A-NGCLCVTQAMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRL 215 (474)
Q Consensus 151 ~--~~~~~~~~e~~~~~~------------a-d~vi~vS~~~~~~l~~~~~~~~~vi~n~~~~~f~~~~~~~~~~~~~~l 215 (474)
+ +..+..++.+...+. . |..++.+....+.....++.+ +.+.|+.. ... ..
T Consensus 155 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~~vGp~~--~~~-----~~----- 220 (402)
T 3ia7_A 155 PADVEAVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQPFAETFDER--FAFVGPTL--TGR-----DG----- 220 (402)
T ss_dssp GGGSHHHHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCGGGSTTGGGCCTT--EEECCCCC--CC-------------
T ss_pred hhhHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcChHhCCccccCCCC--eEEeCCCC--CCc-----cc-----
Confidence 1 111222222222211 0 333333322221111111111 11111100 000 00
Q ss_pred hhccCCCCCccccccccccCCcCcchhhhhcccccccccCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccC
Q 011969 216 NKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNED 295 (474)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~ 295 (474)
...+ ....++++.++++.|+....+ .+.+.+.+..+.+
T Consensus 221 -------------------------~~~~-------~~~~~~~~~v~v~~G~~~~~~-~~~~~~~~~~~~~--------- 258 (402)
T 3ia7_A 221 -------------------------QPGW-------QPPRPDAPVLLVSLGNQFNEH-PEFFRACAQAFAD--------- 258 (402)
T ss_dssp --------------------------CCC-------CCSSTTCCEEEEECCSCSSCC-HHHHHHHHHHHTT---------
T ss_pred -------------------------CCCC-------cccCCCCCEEEEECCCCCcch-HHHHHHHHHHHhc---------
Confidence 0000 001355677888999987654 2333333333322
Q ss_pred CCchhhHhHhhhcCCccccCCCEEEEEEeCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcccEEEeeccCCCC
Q 011969 296 DSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSG 375 (474)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~~~l~l~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~ 375 (474)
.+...++++|++.+.+.+++ + .++|.+.|. ++.. .++..||++|. .+ |
T Consensus 259 -------------------~~~~~~~~~g~~~~~~~~~~----~-~~~v~~~~~-~~~~---~ll~~ad~~v~---~~-G 306 (402)
T 3ia7_A 259 -------------------TPWHVVMAIGGFLDPAVLGP----L-PPNVEAHQW-IPFH---SVLAHARACLT---HG-T 306 (402)
T ss_dssp -------------------SSCEEEEECCTTSCGGGGCS----C-CTTEEEESC-CCHH---HHHTTEEEEEE---CC-C
T ss_pred -------------------CCcEEEEEeCCcCChhhhCC----C-CCcEEEecC-CCHH---HHHhhCCEEEE---CC-C
Confidence 23233455776655443322 1 268999987 6554 89999999997 22 2
Q ss_pred CCCchHHHHHHhcCCcEEEecc-----cccccccccCCcEEEeC----CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Q 011969 376 LDLPMKVVDMFGCGLPVCAVSY-----SCIEELVKVDKNGLLFS----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLE 446 (474)
Q Consensus 376 e~~p~kv~Eama~G~PVia~~~-----~~~~e~v~~~~~G~l~~----~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~ 446 (474)
..++.|||++|+|+|+... ....+.+.+.+.|..+. +++++++++.+++++ ++.++++++.+.+
T Consensus 307 ---~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~~~~ll~~----~~~~~~~~~~~~~ 379 (402)
T 3ia7_A 307 ---TGAVLEAFAAGVPLVLVPHFATEAAPSAERVIELGLGSVLRPDQLEPASIREAVERLAAD----SAVRERVRRMQRD 379 (402)
T ss_dssp ---HHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHHTTSEEECCGGGCSHHHHHHHHHHHHHC----HHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHHcCCEEEccCCCCCHHHHHHHHHHHHcC----HHHHHHHHHHHHH
Confidence 2588999999999996544 46667778889999885 689999999999995 8888888888888
Q ss_pred hccccchHHHH
Q 011969 447 MGLSARWATEW 457 (474)
Q Consensus 447 ~~~~~~w~~~~ 457 (474)
+.....++...
T Consensus 380 ~~~~~~~~~~~ 390 (402)
T 3ia7_A 380 ILSSGGPARAA 390 (402)
T ss_dssp HHTSCHHHHHH
T ss_pred HhhCChHHHHH
Confidence 76555554433
|
| >3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=4e-16 Score=159.00 Aligned_cols=153 Identities=10% Similarity=0.072 Sum_probs=114.3
Q ss_pred CCCCeEEEEEeecccCCCH-HHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCChHHHHH
Q 011969 256 PNRPALVVSSTSWTPDEDF-GILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEE 334 (474)
Q Consensus 256 ~~~~~~i~~~G~l~~~k~~-~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~ 334 (474)
++++.++++.|+....++. ..+++++... . ..|+++++++|++++.+.+.
T Consensus 216 ~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~---------------------------~~p~~~~v~~~~~~~~~~l~- 266 (391)
T 3tsa_A 216 TSARRVCICMGRMVLNATGPAPLLRAVAAA-T---------------------------ELPGVEAVIAVPPEHRALLT- 266 (391)
T ss_dssp CSSEEEEEECCHHHHHHHCSHHHHHHHHHH-H---------------------------TSTTEEEEEECCGGGGGGCT-
T ss_pred CCCCEEEEEcCCCCCcccchHHHHHHHHHh-c---------------------------cCCCeEEEEEECCcchhhcc-
Confidence 4566688888998765444 6666766655 5 25789999999876543332
Q ss_pred HHHHcCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEec----ccccccccccCCc
Q 011969 335 KIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS----YSCIEELVKVDKN 409 (474)
Q Consensus 335 ~~~~l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~----~~~~~e~v~~~~~ 409 (474)
++ ++|.+.|. ++..+ ++..||++|. .+ -++++.|||++|+|+|+.. .....+.+.+.+.
T Consensus 267 -----~~~~~v~~~~~-~~~~~---ll~~ad~~v~---~~----G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~ 330 (391)
T 3tsa_A 267 -----DLPDNARIAES-VPLNL---FLRTCELVIC---AG----GSGTAFTATRLGIPQLVLPQYFDQFDYARNLAAAGA 330 (391)
T ss_dssp -----TCCTTEEECCS-CCGGG---TGGGCSEEEE---CC----CHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTTS
T ss_pred -----cCCCCEEEecc-CCHHH---HHhhCCEEEe---CC----CHHHHHHHHHhCCCEEecCCcccHHHHHHHHHHcCC
Confidence 23 68999987 66544 5699999997 22 2358999999999999954 3456677888889
Q ss_pred EEEeCC------HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHH
Q 011969 410 GLLFSS------SSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEW 457 (474)
Q Consensus 410 G~l~~~------~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~ 457 (474)
|.+++. ++++++++.+++++ ++.++++++.+.++.....|+...
T Consensus 331 g~~~~~~~~~~~~~~l~~ai~~ll~~----~~~~~~~~~~~~~~~~~~~~~~~~ 380 (391)
T 3tsa_A 331 GICLPDEQAQSDHEQFTDSIATVLGD----TGFAAAAIKLSDEITAMPHPAALV 380 (391)
T ss_dssp EEECCSHHHHTCHHHHHHHHHHHHTC----THHHHHHHHHHHHHHTSCCHHHHH
T ss_pred EEecCcccccCCHHHHHHHHHHHHcC----HHHHHHHHHHHHHHHcCCCHHHHH
Confidence 999854 89999999999985 788899999888877667775543
|
| >3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=1.3e-15 Score=156.01 Aligned_cols=152 Identities=18% Similarity=0.093 Sum_probs=109.7
Q ss_pred CCCCeEEEEEeecccC-CCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCChHHHHH
Q 011969 256 PNRPALVVSSTSWTPD-EDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEE 334 (474)
Q Consensus 256 ~~~~~~i~~~G~l~~~-k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~ 334 (474)
++++.+++++|++... ++.+.+.+++..+.+ .+++++++|++++.+.++
T Consensus 230 ~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~-----------------------------~~~~~v~~~g~~~~~~l~- 279 (398)
T 3oti_A 230 PARPEVAITMGTIELQAFGIGAVEPIIAAAGE-----------------------------VDADFVLALGDLDISPLG- 279 (398)
T ss_dssp CSSCEEEECCTTTHHHHHCGGGHHHHHHHHHT-----------------------------SSSEEEEECTTSCCGGGC-
T ss_pred CCCCEEEEEcCCCccccCcHHHHHHHHHHHHc-----------------------------CCCEEEEEECCcChhhhc-
Confidence 4567788899999655 355666666665543 257888888876644332
Q ss_pred HHHHcCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEe----cccccc--cccccC
Q 011969 335 KIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV----SYSCIE--ELVKVD 407 (474)
Q Consensus 335 ~~~~l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~----~~~~~~--e~v~~~ 407 (474)
++ ++|.+.|. + ++..++..||++|. .+ -+.++.|||++|+|+|+. +..... +.+.+.
T Consensus 280 -----~~~~~v~~~~~-~---~~~~ll~~ad~~v~---~~----G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~~~ 343 (398)
T 3oti_A 280 -----TLPRNVRAVGW-T---PLHTLLRTCTAVVH---HG----GGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSRR 343 (398)
T ss_dssp -----SCCTTEEEESS-C---CHHHHHTTCSEEEE---CC----CHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHHHHH
T ss_pred -----cCCCcEEEEcc-C---CHHHHHhhCCEEEE---CC----CHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHHHHC
Confidence 23 69999987 4 57788999999997 22 245899999999999994 456777 888888
Q ss_pred CcEEEeCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHH
Q 011969 408 KNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEW 457 (474)
Q Consensus 408 ~~G~l~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~ 457 (474)
+.|+.++..+.-.+.+.++++ |++.++++++.+.++.....|+...
T Consensus 344 g~g~~~~~~~~~~~~l~~ll~----~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (398)
T 3oti_A 344 GIGLVSTSDKVDADLLRRLIG----DESLRTAAREVREEMVALPTPAETV 389 (398)
T ss_dssp TSEEECCGGGCCHHHHHHHHH----CHHHHHHHHHHHHHHHTSCCHHHHH
T ss_pred CCEEeeCCCCCCHHHHHHHHc----CHHHHHHHHHHHHHHHhCCCHHHHH
Confidence 999998632222333337777 4888999999999887677776544
|
| >3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=3.8e-14 Score=145.53 Aligned_cols=149 Identities=16% Similarity=0.171 Sum_probs=104.0
Q ss_pred CCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEE-EeCCCChHHHHH
Q 011969 256 PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFII-TGKGPDKESYEE 334 (474)
Q Consensus 256 ~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i-vG~g~~~~~~~~ 334 (474)
++++.++++.|+..... .+.+...+..+.+ .+ +++++ +|.+++.+.++
T Consensus 245 ~~~~~v~v~~Gs~~~~~-~~~~~~~~~al~~----------------------------~~-~~~v~~~g~~~~~~~l~- 293 (415)
T 3rsc_A 245 DDLPVVLVSLGTTFNDR-PGFFRDCARAFDG----------------------------QP-WHVVMTLGGQVDPAALG- 293 (415)
T ss_dssp SCCCEEEEECTTTSCCC-HHHHHHHHHHHTT----------------------------SS-CEEEEECTTTSCGGGGC-
T ss_pred CCCCEEEEECCCCCCCh-HHHHHHHHHHHhc----------------------------CC-cEEEEEeCCCCChHHhc-
Confidence 45677888889986543 2333333333322 23 66655 77665554332
Q ss_pred HHHHcCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEec----ccccccccccCCc
Q 011969 335 KIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS----YSCIEELVKVDKN 409 (474)
Q Consensus 335 ~~~~l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~----~~~~~e~v~~~~~ 409 (474)
.+ ++|.+.+. ++.. .++..||++|. . .| ..++.|||++|+|+|+.. .....+.+.+.+.
T Consensus 294 -----~~~~~v~~~~~-~~~~---~ll~~ad~~v~---~-~G---~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~~g~ 357 (415)
T 3rsc_A 294 -----DLPPNVEAHRW-VPHV---KVLEQATVCVT---H-GG---MGTLMEALYWGRPLVVVPQSFDVQPMARRVDQLGL 357 (415)
T ss_dssp -----CCCTTEEEESC-CCHH---HHHHHEEEEEE---S-CC---HHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHHTC
T ss_pred -----CCCCcEEEEec-CCHH---HHHhhCCEEEE---C-Cc---HHHHHHHHHhCCCEEEeCCcchHHHHHHHHHHcCC
Confidence 23 68999987 6544 88999999997 2 22 258899999999999954 4456677777888
Q ss_pred EEEeC----CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHH
Q 011969 410 GLLFS----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWAT 455 (474)
Q Consensus 410 G~l~~----~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~ 455 (474)
|..+. +++++++++.+++++ ++.++++++.+.++.....++.
T Consensus 358 g~~~~~~~~~~~~l~~~i~~ll~~----~~~~~~~~~~~~~~~~~~~~~~ 403 (415)
T 3rsc_A 358 GAVLPGEKADGDTLLAAVGAVAAD----PALLARVEAMRGHVRRAGGAAR 403 (415)
T ss_dssp EEECCGGGCCHHHHHHHHHHHHTC----HHHHHHHHHHHHHHHHSCHHHH
T ss_pred EEEcccCCCCHHHHHHHHHHHHcC----HHHHHHHHHHHHHHHhcCHHHH
Confidence 98885 689999999999984 8888888888887665555544
|
| >2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.55 E-value=3.8e-13 Score=136.77 Aligned_cols=157 Identities=15% Similarity=0.106 Sum_probs=108.6
Q ss_pred CCCCeEEEEEeecccC-------CCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCC
Q 011969 256 PNRPALVVSSTSWTPD-------EDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD 328 (474)
Q Consensus 256 ~~~~~~i~~~G~l~~~-------k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~ 328 (474)
++++.++++.|++... +.+..+++++.. .++++++++++++
T Consensus 208 ~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~--------------------------------~~~~~~~~~g~~~ 255 (384)
T 2p6p_A 208 DTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVR--------------------------------WDVELIVAAPDTV 255 (384)
T ss_dssp CSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHT--------------------------------TTCEEEEECCHHH
T ss_pred CCCCEEEEECCCCCccccccccHHHHHHHHHHHhc--------------------------------CCcEEEEEeCCCC
Confidence 3456688999999875 556666666653 2467777654432
Q ss_pred hHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEeccc----cccccc
Q 011969 329 KESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS----CIEELV 404 (474)
Q Consensus 329 ~~~~~~~~~~l~l~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~----~~~e~v 404 (474)
.+++ +.+ -++|.+ |. +| ...+|..||++|. .+ | ++++.|||++|+|+|+.+.. ...+.+
T Consensus 256 ~~~l----~~~-~~~v~~-~~-~~---~~~~l~~~d~~v~---~~-G---~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~ 318 (384)
T 2p6p_A 256 AEAL----RAE-VPQARV-GW-TP---LDVVAPTCDLLVH---HA-G---GVSTLTGLSAGVPQLLIPKGSVLEAPARRV 318 (384)
T ss_dssp HHHH----HHH-CTTSEE-EC-CC---HHHHGGGCSEEEE---CS-C---TTHHHHHHHTTCCEEECCCSHHHHHHHHHH
T ss_pred HHhh----CCC-CCceEE-cC-CC---HHHHHhhCCEEEe---CC-c---HHHHHHHHHhCCCEEEccCcccchHHHHHH
Confidence 2222 222 258888 65 65 4668899999998 22 2 35899999999999999753 366667
Q ss_pred ccCCcEEEeC----CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHHHHHHH
Q 011969 405 KVDKNGLLFS----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLIT 466 (474)
Q Consensus 405 ~~~~~G~l~~----~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 466 (474)
.+.+.|+.++ +.++++++|.+++++ ++.++++++.+.++.....-+.. -+.+..++.
T Consensus 319 ~~~g~g~~~~~~~~~~~~l~~~i~~ll~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~ 379 (384)
T 2p6p_A 319 ADYGAAIALLPGEDSTEAIADSCQELQAK----DTYARRAQDLSREISGMPLPATV-VTALEQLAH 379 (384)
T ss_dssp HHHTSEEECCTTCCCHHHHHHHHHHHHHC----HHHHHHHHHHHHHHHTSCCHHHH-HHHHHHHHH
T ss_pred HHCCCeEecCcCCCCHHHHHHHHHHHHcC----HHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHhh
Confidence 7778899885 689999999999984 88888888888876644333322 233444443
|
| >4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii} | Back alignment and structure |
|---|
Probab=99.47 E-value=5.2e-13 Score=137.85 Aligned_cols=247 Identities=16% Similarity=0.153 Sum_probs=156.0
Q ss_pred CCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCchHHHHHHHHHHHHhhhcCEEEEeCHHHHH
Q 011969 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179 (474)
Q Consensus 100 ~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~ 179 (474)
.+||+|+++..... ++ . .++++..++|++....+.. ......... ...+.+.+.+|.+++.|+..++
T Consensus 93 ~kPD~Vlv~gd~~~-~~-a-alaA~~~~IPv~h~eaglr-------s~~~~~pee---~nR~~~~~~a~~~~~~te~~~~ 159 (385)
T 4hwg_A 93 EKPDAVLFYGDTNS-CL-S-AIAAKRRKIPIFHMEAGNR-------CFDQRVPEE---INRKIIDHISDVNITLTEHARR 159 (385)
T ss_dssp HCCSEEEEESCSGG-GG-G-HHHHHHTTCCEEEESCCCC-------CSCTTSTHH---HHHHHHHHHCSEEEESSHHHHH
T ss_pred cCCcEEEEECCchH-HH-H-HHHHHHhCCCEEEEeCCCc-------cccccCcHH---HHHHHHHhhhceeecCCHHHHH
Confidence 78999999985432 22 2 4566778899654333331 111111011 2223445689999999999998
Q ss_pred HHHHHhCCc---eEEEeCCCCCCCCCC-ChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhcccccccccC
Q 011969 180 ELAQNWGIK---ATVLYDQPPEFFHPT-SLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLK 255 (474)
Q Consensus 180 ~l~~~~~~~---~~vi~n~~~~~f~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (474)
.+.+. |.+ +.++-|...+.+... +...+.++++++| ++
T Consensus 160 ~l~~~-G~~~~~I~vtGnp~~D~~~~~~~~~~~~~~~~~lg-------------------------------------l~ 201 (385)
T 4hwg_A 160 YLIAE-GLPAELTFKSGSHMPEVLDRFMPKILKSDILDKLS-------------------------------------LT 201 (385)
T ss_dssp HHHHT-TCCGGGEEECCCSHHHHHHHHHHHHHHCCHHHHTT-------------------------------------CC
T ss_pred HHHHc-CCCcCcEEEECCchHHHHHHhhhhcchhHHHHHcC-------------------------------------CC
Confidence 88774 664 444444211111000 0011223444444 22
Q ss_pred CCCCeEEEEEeecc---cCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCChHHH
Q 011969 256 PNRPALVVSSTSWT---PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESY 332 (474)
Q Consensus 256 ~~~~~~i~~~G~l~---~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~~ 332 (474)
+ ++++++..|+.. ..+++..+++|+..+.++ + ++.+++... | .+
T Consensus 202 ~-~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~---------------------------~-~~~vv~p~~-p---~~ 248 (385)
T 4hwg_A 202 P-KQYFLISSHREENVDVKNNLKELLNSLQMLIKE---------------------------Y-NFLIIFSTH-P---RT 248 (385)
T ss_dssp T-TSEEEEEECCC-----CHHHHHHHHHHHHHHHH---------------------------H-CCEEEEEEC-H---HH
T ss_pred c-CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhc---------------------------C-CeEEEEECC-h---HH
Confidence 3 455667777643 346788999999988663 3 566666543 2 35
Q ss_pred HHHHHHc-C-C---CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecc-ccccccccc
Q 011969 333 EEKIRRL-R-L---KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY-SCIEELVKV 406 (474)
Q Consensus 333 ~~~~~~l-~-l---~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~-~~~~e~v~~ 406 (474)
++.++++ + + ++|.+.+. ++..++..+++.||+++. +| | ....||+++|+|+|+... ++..|.++.
T Consensus 249 ~~~l~~~~~~~~~~~~v~l~~~-lg~~~~~~l~~~adlvvt---~S-G----gv~~EA~alG~Pvv~~~~~ter~e~v~~ 319 (385)
T 4hwg_A 249 KKRLEDLEGFKELGDKIRFLPA-FSFTDYVKLQMNAFCILS---DS-G----TITEEASILNLPALNIREAHERPEGMDA 319 (385)
T ss_dssp HHHHHTSGGGGGTGGGEEECCC-CCHHHHHHHHHHCSEEEE---CC-T----THHHHHHHTTCCEEECSSSCSCTHHHHH
T ss_pred HHHHHHHHHHhcCCCCEEEEcC-CCHHHHHHHHHhCcEEEE---CC-c----cHHHHHHHcCCCEEEcCCCccchhhhhc
Confidence 6666665 4 2 58999887 888899999999999996 45 2 257999999999999864 335677755
Q ss_pred CCcEEEeC-CHHHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 011969 407 DKNGLLFS-SSSELADQLLMLFKGFPDDSDVLKKLRNGT 444 (474)
Q Consensus 407 ~~~G~l~~-~~~~la~~i~~l~~~~~~~~~~~~~~~~~~ 444 (474)
+ ++++++ |.+++++++..++++ +..+++|++++
T Consensus 320 G-~~~lv~~d~~~i~~ai~~ll~d----~~~~~~m~~~~ 353 (385)
T 4hwg_A 320 G-TLIMSGFKAERVLQAVKTITEE----HDNNKRTQGLV 353 (385)
T ss_dssp T-CCEECCSSHHHHHHHHHHHHTT----CBTTBCCSCCC
T ss_pred C-ceEEcCCCHHHHHHHHHHHHhC----hHHHHHhhccC
Confidence 5 778886 899999999999985 44444444333
|
| >2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=99.46 E-value=1.3e-11 Score=127.21 Aligned_cols=142 Identities=15% Similarity=0.150 Sum_probs=99.9
Q ss_pred CCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEE-EEEeCCCChHHHHH
Q 011969 256 PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLF-IITGKGPDKESYEE 334 (474)
Q Consensus 256 ~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~ivG~g~~~~~~~~ 334 (474)
++++.++++.|+.. ....+.+.+++..+.+ .++++ +++|.+.+.+.+.
T Consensus 253 ~~~~~v~v~~Gs~~-~~~~~~~~~~~~al~~-----------------------------~~~~~~~~~g~~~~~~~~~- 301 (424)
T 2iya_A 253 DGRPVLLIALGSAF-TDHLDFYRTCLSAVDG-----------------------------LDWHVVLSVGRFVDPADLG- 301 (424)
T ss_dssp SSCCEEEEECCSSS-CCCHHHHHHHHHHHTT-----------------------------CSSEEEEECCTTSCGGGGC-
T ss_pred CCCCEEEEEcCCCC-cchHHHHHHHHHHHhc-----------------------------CCcEEEEEECCcCChHHhc-
Confidence 45667888899987 3444444444444322 34566 5678776544321
Q ss_pred HHHHcCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEeccc----ccccccccCCc
Q 011969 335 KIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS----CIEELVKVDKN 409 (474)
Q Consensus 335 ~~~~l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~----~~~e~v~~~~~ 409 (474)
.+ ++|.+.+. +|+. .+|..||++|. . .| .++++||+++|+|+|+.... ...+.+.+.+.
T Consensus 302 -----~~~~~v~~~~~-~~~~---~~l~~~d~~v~---~-~G---~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~ 365 (424)
T 2iya_A 302 -----EVPPNVEVHQW-VPQL---DILTKASAFIT---H-AG---MGSTMEALSNAVPMVAVPQIAEQTMNAERIVELGL 365 (424)
T ss_dssp -----SCCTTEEEESS-CCHH---HHHTTCSEEEE---C-CC---HHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTS
T ss_pred -----cCCCCeEEecC-CCHH---HHHhhCCEEEE---C-Cc---hhHHHHHHHcCCCEEEecCccchHHHHHHHHHCCC
Confidence 23 68999976 7654 68999999886 2 22 36999999999999999753 34556667788
Q ss_pred EEEeC----CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc
Q 011969 410 GLLFS----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG 448 (474)
Q Consensus 410 G~l~~----~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~ 448 (474)
|+.++ +.++++++|.+++++ ++.++++++.+.+..
T Consensus 366 g~~~~~~~~~~~~l~~~i~~ll~~----~~~~~~~~~~~~~~~ 404 (424)
T 2iya_A 366 GRHIPRDQVTAEKLREAVLAVASD----PGVAERLAAVRQEIR 404 (424)
T ss_dssp EEECCGGGCCHHHHHHHHHHHHHC----HHHHHHHHHHHHHHH
T ss_pred EEEcCcCCCCHHHHHHHHHHHHcC----HHHHHHHHHHHHHHH
Confidence 99886 789999999999985 777777777776654
|
| >2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=99.34 E-value=9.2e-11 Score=121.93 Aligned_cols=149 Identities=13% Similarity=0.031 Sum_probs=106.7
Q ss_pred CCCCeEEEEEeecccC-----CCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCChH
Q 011969 256 PNRPALVVSSTSWTPD-----EDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKE 330 (474)
Q Consensus 256 ~~~~~~i~~~G~l~~~-----k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~ 330 (474)
++++.++++.|+.... +.+..+++++..+ ++++++++++++.+
T Consensus 265 ~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~--------------------------------~~~~v~~~g~~~~~ 312 (441)
T 2yjn_A 265 PERRRVCLTLGISSRENSIGQVSIEELLGAVGDV--------------------------------DAEIIATFDAQQLE 312 (441)
T ss_dssp CSSCEEEEEC----------CCSTTTTHHHHHTS--------------------------------SSEEEECCCTTTTS
T ss_pred CCCCEEEEECCCCcccccChHHHHHHHHHHHHcC--------------------------------CCEEEEEECCcchh
Confidence 4567788999998754 7788888887542 46777777665433
Q ss_pred HHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecc----cccccccc
Q 011969 331 SYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY----SCIEELVK 405 (474)
Q Consensus 331 ~~~~~~~~l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~----~~~~e~v~ 405 (474)
.++ ++ ++|.+.+. +|. ..+|..||++|+ . . -++++.|||++|+|+|+... ....+.+.
T Consensus 313 ~l~------~~~~~v~~~~~-~~~---~~ll~~ad~~V~---~-~---G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~ 375 (441)
T 2yjn_A 313 GVA------NIPDNVRTVGF-VPM---HALLPTCAATVH---H-G---GPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQ 375 (441)
T ss_dssp SCS------SCCSSEEECCS-CCH---HHHGGGCSEEEE---C-C---CHHHHHHHHHTTCCEEECCCSHHHHHHHHHHH
T ss_pred hhc------cCCCCEEEecC-CCH---HHHHhhCCEEEE---C-C---CHHHHHHHHHhCCCEEEeCCcccHHHHHHHHH
Confidence 221 23 68999986 765 457899999997 2 2 24689999999999999976 33566677
Q ss_pred cCCcEEEeC----CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHH
Q 011969 406 VDKNGLLFS----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEW 457 (474)
Q Consensus 406 ~~~~G~l~~----~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~ 457 (474)
+.+.|+.++ ++++++++|.+++++ ++.++++++.+.++.....++...
T Consensus 376 ~~g~g~~~~~~~~~~~~l~~~i~~ll~~----~~~~~~~~~~~~~~~~~~~~~~~~ 427 (441)
T 2yjn_A 376 EFGAGIALPVPELTPDQLRESVKRVLDD----PAHRAGAARMRDDMLAEPSPAEVV 427 (441)
T ss_dssp HHTSEEECCTTTCCHHHHHHHHHHHHHC----HHHHHHHHHHHHHHHTSCCHHHHH
T ss_pred HcCCEEEcccccCCHHHHHHHHHHHhcC----HHHHHHHHHHHHHHHcCCCHHHHH
Confidence 788999885 689999999999984 888888888888776555555443
|
| >3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A* | Back alignment and structure |
|---|
Probab=99.25 E-value=1.6e-09 Score=111.50 Aligned_cols=139 Identities=14% Similarity=0.105 Sum_probs=95.3
Q ss_pred CCCCeEEEEEeecc-cCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCChHHHHH
Q 011969 256 PNRPALVVSSTSWT-PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEE 334 (474)
Q Consensus 256 ~~~~~~i~~~G~l~-~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~ 334 (474)
++++.++++.|+.. ..+.+..+++++..+ ++++++.++....+
T Consensus 219 ~~~~~Vlv~~Gs~~~~~~~~~~~~~al~~~--------------------------------~~~vv~~~g~~~~~---- 262 (404)
T 3h4t_A 219 AGSPPVYVGFGSGPAPAEAARVAIEAVRAQ--------------------------------GRRVVLSSGWAGLG---- 262 (404)
T ss_dssp TSSCCEEECCTTSCCCTTHHHHHHHHHHHT--------------------------------TCCEEEECTTTTCC----
T ss_pred cCCCeEEEECCCCCCcHHHHHHHHHHHHhC--------------------------------CCEEEEEeCCcccc----
Confidence 44566888889987 555566666666542 34566654433221
Q ss_pred HHHHcCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEeccc----ccccccccCCc
Q 011969 335 KIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS----CIEELVKVDKN 409 (474)
Q Consensus 335 ~~~~l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~----~~~e~v~~~~~ 409 (474)
..+. ++|.+.+. +|. ..++..||++|. .+ | ..++.||+++|+|+|+.... ...+.+...+.
T Consensus 263 ---~~~~~~~v~~~~~-~~~---~~ll~~~d~~v~---~g-G---~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~~G~ 328 (404)
T 3h4t_A 263 ---RIDEGDDCLVVGE-VNH---QVLFGRVAAVVH---HG-G---AGTTTAVTRAGAPQVVVPQKADQPYYAGRVADLGV 328 (404)
T ss_dssp ---CSSCCTTEEEESS-CCH---HHHGGGSSEEEE---CC-C---HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTS
T ss_pred ---cccCCCCEEEecC-CCH---HHHHhhCcEEEE---CC-c---HHHHHHHHHcCCCEEEcCCcccHHHHHHHHHHCCC
Confidence 1223 68999976 654 567889999997 22 2 24899999999999998643 23344666778
Q ss_pred EEEeC----CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhcc
Q 011969 410 GLLFS----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGL 449 (474)
Q Consensus 410 G~l~~----~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~ 449 (474)
|...+ +.+++++++..+++ ++.++++++.+.++..
T Consensus 329 g~~l~~~~~~~~~l~~ai~~ll~-----~~~~~~~~~~~~~~~~ 367 (404)
T 3h4t_A 329 GVAHDGPTPTVESLSAALATALT-----PGIRARAAAVAGTIRT 367 (404)
T ss_dssp EEECSSSSCCHHHHHHHHHHHTS-----HHHHHHHHHHHTTCCC
T ss_pred EeccCcCCCCHHHHHHHHHHHhC-----HHHHHHHHHHHHHHhh
Confidence 88874 68999999999986 4566777777766554
|
| >3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A | Back alignment and structure |
|---|
Probab=99.24 E-value=1.7e-09 Score=117.02 Aligned_cols=173 Identities=13% Similarity=0.064 Sum_probs=128.2
Q ss_pred eEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEE--EEeCCC-ChHHHHHHH
Q 011969 260 ALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFI--ITGKGP-DKESYEEKI 336 (474)
Q Consensus 260 ~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--ivG~g~-~~~~~~~~~ 336 (474)
++++..++ ..|..+.++++...+.++ .|+..++ ++|.++ ....+.+.+
T Consensus 442 v~Fg~fn~--~~Ki~p~~l~~WarIL~~---------------------------vP~s~L~l~~~g~~~g~~~~~~~~~ 492 (631)
T 3q3e_A 442 VNIGIAST--TMKLNPYFLEALKAIRDR---------------------------AKVKVHFHFALGQSNGITHPYVERF 492 (631)
T ss_dssp EEEEEEEC--STTCCHHHHHHHHHHHHH---------------------------CSSEEEEEEEESSCCGGGHHHHHHH
T ss_pred EEEEECCc--cccCCHHHHHHHHHHHHh---------------------------CCCcEEEEEecCCCchhhHHHHHHH
Confidence 34555554 568889999999988875 6776664 367432 233344456
Q ss_pred HHcCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecccccccccc------cCCc
Q 011969 337 RRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVK------VDKN 409 (474)
Q Consensus 337 ~~l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~~~~e~v~------~~~~ 409 (474)
.+.|+ ++|.|.|. ++.+++...|+.+|+++-| +.. +.|++.+|||+||+|||+.....+..-+. -|-.
T Consensus 493 ~~~GI~~Rv~F~g~-~p~~e~la~y~~aDIfLDp---fpy-~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~~GLp 567 (631)
T 3q3e_A 493 IKSYLGDSATAHPH-SPYHQYLRILHNCDMMVNP---FPF-GNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKRLGLP 567 (631)
T ss_dssp HHHHHGGGEEEECC-CCHHHHHHHHHTCSEEECC---SSS-CCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHHTTCC
T ss_pred HHcCCCccEEEcCC-CCHHHHHHHHhcCcEEEeC---Ccc-cCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHhcCCC
Confidence 67788 69999998 9999999999999999983 432 34899999999999999987655554332 2445
Q ss_pred E-EEeCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccc----cchHHHHHHHHHHHHHHHhh
Q 011969 410 G-LLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLS----ARWATEWEEHAKPLITEVIS 470 (474)
Q Consensus 410 G-~l~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~----~~w~~~~~~~~~~~~~~~~~ 470 (474)
+ ++..|.+++.+....+.++ ++.++++|++.++.... ..|...+++.++.++++..+
T Consensus 568 E~LIA~d~eeYv~~Av~La~D----~~~l~~LR~~Lr~~~~~spLFd~~~~~~e~~ye~~~~~w~~ 629 (631)
T 3q3e_A 568 EWLIANTVDEYVERAVRLAEN----HQERLELRRYIIENNGLNTLFTGDPRPMGQVFLEKLNAFLK 629 (631)
T ss_dssp GGGEESSHHHHHHHHHHHHHC----HHHHHHHHHHHHHSCCHHHHTCSCCTHHHHHHHHHHHHHHH
T ss_pred cceecCCHHHHHHHHHHHhCC----HHHHHHHHHHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHh
Confidence 5 3778999999999999995 99999999999875411 14567778888777776544
|
| >1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=99.23 E-value=1.8e-09 Score=111.16 Aligned_cols=136 Identities=11% Similarity=0.038 Sum_probs=94.0
Q ss_pred CCCeEEEEEeecc-cCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEE-eCCCChHHHHH
Q 011969 257 NRPALVVSSTSWT-PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIIT-GKGPDKESYEE 334 (474)
Q Consensus 257 ~~~~~i~~~G~l~-~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iv-G~g~~~~~~~~ 334 (474)
+++.++++.|+.. ..+..+.+++++..+ + .+++++ |.+....
T Consensus 237 ~~~~v~v~~Gs~~~~~~~~~~~~~al~~~-------------------------------~-~~~v~~~g~~~~~~---- 280 (415)
T 1iir_A 237 GPPPVYLGFGSLGAPADAVRVAIDAIRAH-------------------------------G-RRVILSRGWADLVL---- 280 (415)
T ss_dssp SSCCEEEECC---CCHHHHHHHHHHHHHT-------------------------------T-CCEEECTTCTTCCC----
T ss_pred CCCeEEEeCCCCCCcHHHHHHHHHHHHHC-------------------------------C-CeEEEEeCCCcccc----
Confidence 3456888999985 666666666766543 2 344444 7654320
Q ss_pred HHHHcCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecccc----cccccccCCc
Q 011969 335 KIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVDKN 409 (474)
Q Consensus 335 ~~~~l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~~----~~e~v~~~~~ 409 (474)
..+ ++|.+.+. +|.. .++..||++|. . .| .+++.||+++|+|+|+....+ ..+.+.+.+.
T Consensus 281 ----~~~~~~v~~~~~-~~~~---~~l~~~d~~v~---~-~G---~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~ 345 (415)
T 1iir_A 281 ----PDDGADCFAIGE-VNHQ---VLFGRVAAVIH---H-GG---AGTTHVAARAGAPQILLPQMADQPYYAGRVAELGV 345 (415)
T ss_dssp ----SSCGGGEEECSS-CCHH---HHGGGSSEEEE---C-CC---HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTS
T ss_pred ----cCCCCCEEEeCc-CChH---HHHhhCCEEEe---C-CC---hhHHHHHHHcCCCEEECCCCCccHHHHHHHHHCCC
Confidence 123 58999876 8764 45799999997 2 22 369999999999999986533 4566777788
Q ss_pred EEEeC----CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc
Q 011969 410 GLLFS----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG 448 (474)
Q Consensus 410 G~l~~----~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~ 448 (474)
|+.++ +.++++++|.++ + |++.++++++.+.++.
T Consensus 346 g~~~~~~~~~~~~l~~~i~~l-~----~~~~~~~~~~~~~~~~ 383 (415)
T 1iir_A 346 GVAHDGPIPTFDSLSAALATA-L----TPETHARATAVAGTIR 383 (415)
T ss_dssp EEECSSSSCCHHHHHHHHHHH-T----SHHHHHHHHHHHHHSC
T ss_pred cccCCcCCCCHHHHHHHHHHH-c----CHHHHHHHHHHHHHHh
Confidence 98875 689999999999 7 4777777777777654
|
| >4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A* | Back alignment and structure |
|---|
Probab=99.11 E-value=3.4e-10 Score=115.01 Aligned_cols=144 Identities=17% Similarity=0.128 Sum_probs=94.3
Q ss_pred CCCCCeEEEEEeecccCCC-HHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCChHHHH
Q 011969 255 KPNRPALVVSSTSWTPDED-FGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYE 333 (474)
Q Consensus 255 ~~~~~~~i~~~G~l~~~k~-~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~~~ 333 (474)
.++++.++++.|+....++ ...+.+++..+.+ .+..+++.+.+.+.+.
T Consensus 234 ~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~-----------------------------~~~~~v~~~~~~~~~~-- 282 (400)
T 4amg_A 234 AAGRRRIAVTLGSIDALSGGIAKLAPLFSEVAD-----------------------------VDAEFVLTLGGGDLAL-- 282 (400)
T ss_dssp CTTCCEEEECCCSCC--CCSSSTTHHHHHHGGG-----------------------------SSSEEEEECCTTCCCC--
T ss_pred cCCCcEEEEeCCcccccCccHHHHHHHHHHhhc-----------------------------cCceEEEEecCccccc--
Confidence 3566767888888765443 3444445555433 3455666554433221
Q ss_pred HHHHHcCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecc----cccccccccCC
Q 011969 334 EKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY----SCIEELVKVDK 408 (474)
Q Consensus 334 ~~~~~l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~----~~~~e~v~~~~ 408 (474)
...+ +++.+.+. +| ...+|..+|++|. ..| .+++.||+++|+|+|+... ....+.+.+.+
T Consensus 283 ----~~~~~~~v~~~~~-~p---~~~lL~~~~~~v~----h~G---~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~~G 347 (400)
T 4amg_A 283 ----LGELPANVRVVEW-IP---LGALLETCDAIIH----HGG---SGTLLTALAAGVPQCVIPHGSYQDTNRDVLTGLG 347 (400)
T ss_dssp ----CCCCCTTEEEECC-CC---HHHHHTTCSEEEE----CCC---HHHHHHHHHHTCCEEECCC---CHHHHHHHHHHT
T ss_pred ----cccCCCCEEEEee-cC---HHHHhhhhhheec----cCC---ccHHHHHHHhCCCEEEecCcccHHHHHHHHHHCC
Confidence 1123 68988865 76 4567899999886 122 4589999999999999654 33456666778
Q ss_pred cEEEeCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc
Q 011969 409 NGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG 448 (474)
Q Consensus 409 ~G~l~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~ 448 (474)
.|+..++.+..+++|.+++++ ++.+++.++-+.++.
T Consensus 348 ~g~~l~~~~~~~~al~~lL~d----~~~r~~a~~l~~~~~ 383 (400)
T 4amg_A 348 IGFDAEAGSLGAEQCRRLLDD----AGLREAALRVRQEMS 383 (400)
T ss_dssp SEEECCTTTCSHHHHHHHHHC----HHHHHHHHHHHHHHH
T ss_pred CEEEcCCCCchHHHHHHHHcC----HHHHHHHHHHHHHHH
Confidence 898888767778899999985 776666666665554
|
| >1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=99.07 E-value=2.3e-08 Score=102.91 Aligned_cols=91 Identities=8% Similarity=-0.031 Sum_probs=69.4
Q ss_pred CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEeccc----ccccccccCCcEEEeC---
Q 011969 342 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS----CIEELVKVDKNGLLFS--- 414 (474)
Q Consensus 342 ~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~----~~~e~v~~~~~G~l~~--- 414 (474)
++|.+.+. +|. ..++..||++|. ..| .+++.||+++|+|+|+.... ...+.+.+.+.|+.++
T Consensus 286 ~~v~~~~~-~~~---~~ll~~~d~~v~----~~G---~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~ 354 (416)
T 1rrv_A 286 DDCFAIDE-VNF---QALFRRVAAVIH----HGS---AGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPT 354 (416)
T ss_dssp TTEEEESS-CCH---HHHGGGSSEEEE----CCC---HHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEECSSSC
T ss_pred CCEEEecc-CCh---HHHhccCCEEEe----cCC---hhHHHHHHHcCCCEEEccCCCCcHHHHHHHHHCCCccCCCCCC
Confidence 58999876 764 567899999997 222 45999999999999998643 3445566778888874
Q ss_pred -CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc
Q 011969 415 -SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG 448 (474)
Q Consensus 415 -~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~ 448 (474)
+.++++++|.++ + |++.++++++.+.++.
T Consensus 355 ~~~~~l~~~i~~l-~----~~~~~~~~~~~~~~~~ 384 (416)
T 1rrv_A 355 PTFESLSAALTTV-L----APETRARAEAVAGMVL 384 (416)
T ss_dssp CCHHHHHHHHHHH-T----SHHHHHHHHHHTTTCC
T ss_pred CCHHHHHHHHHHh-h----CHHHHHHHHHHHHHHh
Confidence 689999999999 7 4777777776666544
|
| >2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.04 E-value=6.9e-10 Score=100.15 Aligned_cols=134 Identities=12% Similarity=0.126 Sum_probs=95.3
Q ss_pred CCCCeEEEEEeecc---cCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCChHHH
Q 011969 256 PNRPALVVSSTSWT---PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESY 332 (474)
Q Consensus 256 ~~~~~~i~~~G~l~---~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~~ 332 (474)
++++.+++++|+.. +.+.+..+++++..+ + .+++++++++..+
T Consensus 19 ~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~-------------------------------~-~~~~~~~g~~~~~-- 64 (170)
T 2o6l_A 19 GENGVVVFSLGSMVSNMTEERANVIASALAQI-------------------------------P-QKVLWRFDGNKPD-- 64 (170)
T ss_dssp TTTCEEEEECCSCCTTCCHHHHHHHHHHHTTS-------------------------------S-SEEEEECCSSCCT--
T ss_pred CCCCEEEEECCCCcccCCHHHHHHHHHHHHhC-------------------------------C-CeEEEEECCcCcc--
Confidence 34566889999986 445556666665431 2 5677777655322
Q ss_pred HHHHHHcCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEeccc----ccccccccC
Q 011969 333 EEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS----CIEELVKVD 407 (474)
Q Consensus 333 ~~~~~~l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~----~~~e~v~~~ 407 (474)
.+ ++|.+.|. +|.+++..+ ..||++|+ . . -++++.|||++|+|+|+.... ...+.+.+.
T Consensus 65 -------~~~~~v~~~~~-~~~~~~l~~-~~ad~~I~---~-~---G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~ 128 (170)
T 2o6l_A 65 -------TLGLNTRLYKW-IPQNDLLGH-PKTRAFIT---H-G---GANGIYEAIYHGIPMVGIPLFADQPDNIAHMKAR 128 (170)
T ss_dssp -------TCCTTEEEESS-CCHHHHHTS-TTEEEEEE---C-C---CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTT
T ss_pred -------cCCCcEEEecC-CCHHHHhcC-CCcCEEEE---c-C---CccHHHHHHHcCCCEEeccchhhHHHHHHHHHHc
Confidence 23 58999986 877554332 89999997 2 1 247999999999999999753 446677788
Q ss_pred CcEEEeC----CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHh
Q 011969 408 KNGLLFS----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEM 447 (474)
Q Consensus 408 ~~G~l~~----~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~ 447 (474)
+.|+.++ +.++++++|..++++ ++ +++++.+.
T Consensus 129 g~g~~~~~~~~~~~~l~~~i~~ll~~----~~----~~~~a~~~ 164 (170)
T 2o6l_A 129 GAAVRVDFNTMSSTDLLNALKRVIND----PS----YKENVMKL 164 (170)
T ss_dssp TSEEECCTTTCCHHHHHHHHHHHHHC----HH----HHHHHHHH
T ss_pred CCeEEeccccCCHHHHHHHHHHHHcC----HH----HHHHHHHH
Confidence 8999986 689999999999985 54 45555543
|
| >3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A* | Back alignment and structure |
|---|
Probab=98.56 E-value=1.9e-05 Score=83.05 Aligned_cols=167 Identities=17% Similarity=0.134 Sum_probs=101.2
Q ss_pred CCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEE-EeCCCChHHHHH
Q 011969 256 PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFII-TGKGPDKESYEE 334 (474)
Q Consensus 256 ~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i-vG~g~~~~~~~~ 334 (474)
++++++.+..|+.... ..+.+.+.+..+.+. +.++++ +|.+ ..+.+.+
T Consensus 271 ~~~~vVyvsfGS~~~~-~~~~~~el~~~l~~~-----------------------------~~~flw~~~~~-~~~~lp~ 319 (454)
T 3hbf_A 271 ENSSVVYISFGSVVTP-PPHELTALAESLEEC-----------------------------GFPFIWSFRGD-PKEKLPK 319 (454)
T ss_dssp CTTCEEEEECCSSCCC-CHHHHHHHHHHHHHH-----------------------------CCCEEEECCSC-HHHHSCT
T ss_pred CCCceEEEecCCCCcC-CHHHHHHHHHHHHhC-----------------------------CCeEEEEeCCc-chhcCCH
Confidence 4567677888888753 345555555555442 234444 4432 1111111
Q ss_pred -HHHHcCCCcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEeccc----ccccccccC-C
Q 011969 335 -KIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS----CIEELVKVD-K 408 (474)
Q Consensus 335 -~~~~l~l~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~----~~~e~v~~~-~ 408 (474)
..++.. +|+...+ |+|+ ..++.++++.++. +++. -+.+.|++++|+|+|+.... .....+.+. +
T Consensus 320 ~~~~~~~-~~~~vv~-w~Pq---~~vL~h~~v~~fv---tH~G--~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g 389 (454)
T 3hbf_A 320 GFLERTK-TKGKIVA-WAPQ---VEILKHSSVGVFL---THSG--WNSVLECIVGGVPMISRPFFGDQGLNTILTESVLE 389 (454)
T ss_dssp THHHHTT-TTEEEES-SCCH---HHHHHSTTEEEEE---ECCC--HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSC
T ss_pred hHHhhcC-CceEEEe-eCCH---HHHHhhcCcCeEE---ecCC--cchHHHHHHcCCCEecCcccccHHHHHHHHHHhhC
Confidence 111221 5788884 6886 4788999966663 3331 34899999999999998642 233445553 8
Q ss_pred cEEEeC----CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchH-----HHHHHHHHHHHHHHh
Q 011969 409 NGLLFS----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWA-----TEWEEHAKPLITEVI 469 (474)
Q Consensus 409 ~G~l~~----~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~-----~~~~~~~~~~~~~~~ 469 (474)
.|+... +.+++++++.+++++ +..+++++++.++....+=+ .++ +.++.+++++.
T Consensus 390 ~Gv~l~~~~~~~~~l~~av~~ll~~-----~~~~~~r~~a~~l~~~~~~a~~~gGsS~-~~l~~~v~~i~ 453 (454)
T 3hbf_A 390 IGVGVDNGVLTKESIKKALELTMSS-----EKGGIMRQKIVKLKESAFKAVEQNGTSA-MDFTTLIQIVT 453 (454)
T ss_dssp SEEECGGGSCCHHHHHHHHHHHHSS-----HHHHHHHHHHHHHHHHHHHHTSTTSHHH-HHHHHHHHHHT
T ss_pred eeEEecCCCCCHHHHHHHHHHHHCC-----ChHHHHHHHHHHHHHHHHHhhccCCCHH-HHHHHHHHHHh
Confidence 888874 589999999999974 34567788877754222211 233 34666666654
|
| >1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* | Back alignment and structure |
|---|
Probab=98.52 E-value=2.1e-06 Score=94.85 Aligned_cols=183 Identities=13% Similarity=0.079 Sum_probs=122.8
Q ss_pred cCCCCCeEEEEEeecccCCCHHH-HHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCCh-HH
Q 011969 254 LKPNRPALVVSSTSWTPDEDFGI-LLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK-ES 331 (474)
Q Consensus 254 ~~~~~~~~i~~~G~l~~~k~~~~-Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~-~~ 331 (474)
+.++.+ +++++.|++..|+.++ ++..+..+.+ |.+++........+++.|++... +.
T Consensus 522 vdpd~l-~~~~vkRl~eYKRq~Lnil~ii~~~~~--------------------i~~~~~~~~~p~q~If~GKA~P~y~~ 580 (796)
T 1l5w_A 522 INPQAI-FDIQIKRLHEYKRQHLNLLHILALYKE--------------------IRENPQADRVPRVFLFGAKAAPGYYL 580 (796)
T ss_dssp CCTTSE-EEEEESCCCGGGTHHHHHHHHHHHHHH--------------------HHTCTTCCCCCEEEEEECCCCTTCHH
T ss_pred cCCCcc-eEeeeecchhhcccCEeHHHHHHHHHH--------------------HhcCCCCCCCCeEEEEEecCChhHHH
Confidence 445555 8899999999999999 8888887654 22333222345899999988533 21
Q ss_pred -------HHHHHH----HcCC-C--cEEEecCCCCcccHHHHHhcccEEEeeccCCC--CCCCchHHHHHHhcCCcEEEe
Q 011969 332 -------YEEKIR----RLRL-K--RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS--GLDLPMKVVDMFGCGLPVCAV 395 (474)
Q Consensus 332 -------~~~~~~----~l~l-~--~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~--~e~~p~kv~Eama~G~PVia~ 395 (474)
+.+.++ +-.. + +|.|+.. -+.+-...++..||+.++ +|. .|.+|+.=+=+|..|.+.|++
T Consensus 581 aK~iIk~i~~va~~in~Dp~~~~~lKVvfl~n-Y~vslA~~I~~gaDv~l~---~S~a~~EAsGTs~MKam~NGaL~iGt 656 (796)
T 1l5w_A 581 AKNIIFAINKVADVINNDPLVGDKLKVVFLPD-YCVSAAEKLIPAADISEQ---ISTAGKEASGTGNMKLALNGALTVGT 656 (796)
T ss_dssp HHHHHHHHHHHHHHHHTCTTTGGGEEEEECSS-CCHHHHHHHGGGCSEEEE---CCCTTTCCCCSHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHHHHHHHhccccccCCceEEEEECC-CCHHHHHHHhhhcceeec---CCCCCCCCCchHHHHHHHcCCeeecC
Confidence 222232 1123 4 6999877 778888999999999999 554 699999999999999999998
Q ss_pred ccccccccccc--CCcEEEeC-CHHHHHHHHH------HHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHHHHHHH
Q 011969 396 SYSCIEELVKV--DKNGLLFS-SSSELADQLL------MLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLIT 466 (474)
Q Consensus 396 ~~~~~~e~v~~--~~~G~l~~-~~~~la~~i~------~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 466 (474)
--|...|+.+. .+|||+|. +.+++.+.-. .++.. ++ ..+++...+.. ..++|... +..++++.
T Consensus 657 LDGanvEi~e~vG~~NgF~FG~~~~ev~~l~~~~y~a~~~y~~---~~-~~~~vvd~~~~--g~fs~~~~--~~y~~Ly~ 728 (796)
T 1l5w_A 657 LDGANVEIAEKVGEENIFIFGHTVEQVKAILAKGYDPVKWRKK---DK-VLDAVLKELES--GKYSDGDK--HAFDQMLH 728 (796)
T ss_dssp SCTTHHHHHHHHCGGGSEECSCCHHHHHHHHHHCCCHHHHHHH---CH-HHHHHHHHHHH--TTTTTTCT--TTTHHHHH
T ss_pred cCCeeeehhhccCCCcEEEecCCHHHHHHHHHcccCHHHHhhc---CH-HHHHHHHHHHc--CCCCCCcH--HHHHHHHH
Confidence 77777776544 47999997 5666653222 12222 34 45555555554 25677553 22555555
Q ss_pred HHh
Q 011969 467 EVI 469 (474)
Q Consensus 467 ~~~ 469 (474)
.+.
T Consensus 729 ~L~ 731 (796)
T 1l5w_A 729 SIG 731 (796)
T ss_dssp HTS
T ss_pred HHh
Confidence 553
|
| >2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A* | Back alignment and structure |
|---|
Probab=98.47 E-value=2.1e-05 Score=82.48 Aligned_cols=112 Identities=16% Similarity=0.146 Sum_probs=75.6
Q ss_pred CcEEEecCCCCcccHHHHHh--cccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecc----cccccccccC-CcEEEeC
Q 011969 342 KRVAFRTMWLSAEDYPLLLG--SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY----SCIEELVKVD-KNGLLFS 414 (474)
Q Consensus 342 ~~V~f~g~~v~~~~~~~~l~--~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~----~~~~e~v~~~-~~G~l~~ 414 (474)
+++...+ |+|+. .+|. .+|++|. -.| .+++.||+++|+|+|+... ......+.+. +.|+..+
T Consensus 325 ~~~~v~~-w~pq~---~vL~h~~~~~fvt----h~G---~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~~l~ 393 (456)
T 2c1x_A 325 GYGMVVP-WAPQA---EVLAHEAVGAFVT----HCG---WNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIE 393 (456)
T ss_dssp TTEEEES-CCCHH---HHHTSTTEEEEEE----CCC---HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECG
T ss_pred CceEEec-CCCHH---HHhcCCcCCEEEe----cCC---cchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEEEec
Confidence 4788886 68764 5788 5566665 222 3599999999999999864 2334455566 7888874
Q ss_pred ----CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccch-----HHHHHHHHHHHHHHHhh
Q 011969 415 ----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARW-----ATEWEEHAKPLITEVIS 470 (474)
Q Consensus 415 ----~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w-----~~~~~~~~~~~~~~~~~ 470 (474)
+.++++++|.+++++ ++ .+++++++.++....+= ..++ +.++.+++++.+
T Consensus 394 ~~~~~~~~l~~~i~~ll~~----~~-~~~~r~~a~~l~~~~~~a~~~gGsS~-~~l~~~v~~~~~ 452 (456)
T 2c1x_A 394 GGVFTKSGLMSCFDQILSQ----EK-GKKLRENLRALRETADRAVGPKGSST-ENFITLVDLVSK 452 (456)
T ss_dssp GGSCCHHHHHHHHHHHHHS----HH-HHHHHHHHHHHHHHHHHHTSTTCHHH-HHHHHHHHHHTS
T ss_pred CCCcCHHHHHHHHHHHHCC----Cc-HHHHHHHHHHHHHHHHHhhhcCCcHH-HHHHHHHHHHHh
Confidence 589999999999985 54 67788888775533211 1223 346666666543
|
| >2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10 | Back alignment and structure |
|---|
Probab=98.44 E-value=3.7e-05 Score=81.00 Aligned_cols=112 Identities=16% Similarity=0.236 Sum_probs=76.1
Q ss_pred CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEeccc----cccccc-ccCCcEEEeC--
Q 011969 342 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS----CIEELV-KVDKNGLLFS-- 414 (474)
Q Consensus 342 ~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~----~~~e~v-~~~~~G~l~~-- 414 (474)
+++.+.+ |+|+. .+|.++++.++. +++. .+.+.||+++|+|+|+.... .....+ +..+.|+...
T Consensus 353 ~~~~v~~-~~pq~---~~L~h~~~~~~v---th~G--~~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~~~ 423 (482)
T 2pq6_A 353 DRGLIAS-WCPQD---KVLNHPSIGGFL---THCG--WNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEIDTN 423 (482)
T ss_dssp TTEEEES-CCCHH---HHHTSTTEEEEE---ECCC--HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECCSS
T ss_pred CCEEEEe-ecCHH---HHhcCCCCCEEE---ecCC--cchHHHHHHcCCCEEecCcccchHHHHHHHHHHhCEEEEECCC
Confidence 5788886 68875 478887774442 2331 35999999999999998642 233334 3567888875
Q ss_pred -CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchH-----HHHHHHHHHHHHHH
Q 011969 415 -SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWA-----TEWEEHAKPLITEV 468 (474)
Q Consensus 415 -~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~-----~~~~~~~~~~~~~~ 468 (474)
+.++++++|.+++.+ ++ .+++++++.++....+=+ .++ +.++.+++++
T Consensus 424 ~~~~~l~~~i~~ll~~----~~-~~~~r~~a~~l~~~~~~a~~~gGss~-~~l~~~v~~~ 477 (482)
T 2pq6_A 424 VKREELAKLINEVIAG----DK-GKKMKQKAMELKKKAEENTRPGGCSY-MNLNKVIKDV 477 (482)
T ss_dssp CCHHHHHHHHHHHHTS----HH-HHHHHHHHHHHHHHHHHHTSTTCHHH-HHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHcC----Cc-HHHHHHHHHHHHHHHHHHHhcCCcHH-HHHHHHHHHH
Confidence 689999999999985 54 577888888765332211 222 4466666665
|
| >2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} | Back alignment and structure |
|---|
Probab=98.39 E-value=2.4e-06 Score=94.37 Aligned_cols=136 Identities=14% Similarity=0.094 Sum_probs=99.9
Q ss_pred cCCCCCeEEEEEeecccCCCHHH-HHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCCh-HH
Q 011969 254 LKPNRPALVVSSTSWTPDEDFGI-LLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK-ES 331 (474)
Q Consensus 254 ~~~~~~~~i~~~G~l~~~k~~~~-Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~-~~ 331 (474)
+.++.+ +++++.|++..|+.++ ++..+..+.+ |.+++........+++.|++... +.
T Consensus 512 vdpd~l-~~~~vkRlheYKRq~Lnil~ii~~~~~--------------------i~~~~~~~~~p~q~If~GKA~P~y~~ 570 (796)
T 2c4m_A 512 IDPESI-FDVQIKRLHEYKRQLMNALYVLDLYFR--------------------IKEDGLTDIPARTVIFGAKAAPGYVR 570 (796)
T ss_dssp CCTTSE-EEEEECCCCGGGTHHHHHHHHHHHHHH--------------------HHTSCCCSSCCEEEEEECCCCTTCHH
T ss_pred CCCCCc-EEEEeecchhhcccCEeHHHHHHHHHH--------------------HhhCCCCCCCCeEEEEEecCCHhHHH
Confidence 445555 8899999999999999 8888887654 22222222245899999988533 21
Q ss_pred -------HHHHHH----HcCC-C--cEEEecCCCCcccHHHHHhcccEEEeeccCCC--CCCCchHHHHHHhcCCcEEEe
Q 011969 332 -------YEEKIR----RLRL-K--RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS--GLDLPMKVVDMFGCGLPVCAV 395 (474)
Q Consensus 332 -------~~~~~~----~l~l-~--~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~--~e~~p~kv~Eama~G~PVia~ 395 (474)
+.+.++ +-.. + +|.|+.. -+.+-...++..||+.++ +|. .|.+|+.=+=+|..|.+.|++
T Consensus 571 aK~iIk~i~~va~~in~dp~~~~~lKVvFl~n-Y~vslA~~I~~gaDv~l~---~S~a~~EAsGTs~MKam~NGaL~iGt 646 (796)
T 2c4m_A 571 AKAIIKLINSIADLVNNDPEVSPLLKVVFVEN-YNVSPAEHILPASDVSEQ---ISTAGKEASGTSNMKFMMNGALTLGT 646 (796)
T ss_dssp HHHHHHHHHHHHHHHHTCTTTTTTEEEEEETT-CCHHHHHHHGGGCSEEEE---CCCTTSCSCCHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHHhccccccCCceEEEEECC-CCHHHHHHHhhhcceeec---CCCCCCCCCchHHHHHHHcCCeEEec
Confidence 223333 1123 4 7999877 788888999999999999 554 699999999999999999999
Q ss_pred ccccccccccc--CCcEEEeC
Q 011969 396 SYSCIEELVKV--DKNGLLFS 414 (474)
Q Consensus 396 ~~~~~~e~v~~--~~~G~l~~ 414 (474)
--|...|+.+. .+|||+|.
T Consensus 647 LDGanvEi~e~vG~~NgF~FG 667 (796)
T 2c4m_A 647 MDGANVEIVDSVGEENAYIFG 667 (796)
T ss_dssp SSTHHHHHHHHHCGGGSEEES
T ss_pred cCCeEeehhhhcCCCcEEEec
Confidence 77777776544 47999996
|
| >2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A* | Back alignment and structure |
|---|
Probab=98.34 E-value=0.00055 Score=72.11 Aligned_cols=90 Identities=19% Similarity=0.178 Sum_probs=61.5
Q ss_pred EecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecc----ccccccc-ccCCcEEEeC------
Q 011969 346 FRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY----SCIEELV-KVDKNGLLFS------ 414 (474)
Q Consensus 346 f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~----~~~~e~v-~~~~~G~l~~------ 414 (474)
....|+|+. .+|.++++.++. +++. -+.+.||+++|+|+|+... ......+ +.-+.|+...
T Consensus 342 ~v~~w~Pq~---~vL~h~~v~~fv---tHgG--~~S~~Eal~~GvP~i~~P~~~DQ~~na~~l~~~~G~g~~l~~~~~~~ 413 (480)
T 2vch_A 342 VIPFWAPQA---QVLAHPSTGGFL---THCG--WNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDGL 413 (480)
T ss_dssp EEESCCCHH---HHHHSTTEEEEE---ECCC--HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCCTTSC
T ss_pred EEeCccCHH---HHhCCCCcCeEE---eccc--chhHHHHHHcCCCEEeccccccchHHHHHHHHHhCeEEEeecccCCc
Confidence 444568764 789999976552 3331 3489999999999999864 2233443 5667787652
Q ss_pred -CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhc
Q 011969 415 -SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG 448 (474)
Q Consensus 415 -~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~ 448 (474)
+.++++++|.+++.+ + .-+++++++.++.
T Consensus 414 ~~~~~l~~av~~vl~~----~-~~~~~r~~a~~l~ 443 (480)
T 2vch_A 414 VRREEVARVVKGLMEG----E-EGKGVRNKMKELK 443 (480)
T ss_dssp CCHHHHHHHHHHHHTS----T-HHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHhcC----c-chHHHHHHHHHHH
Confidence 479999999999974 2 3355666666544
|
| >2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A* | Back alignment and structure |
|---|
Probab=98.27 E-value=0.0021 Score=67.29 Aligned_cols=131 Identities=16% Similarity=0.098 Sum_probs=80.7
Q ss_pred CCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEE-EEEeCC--CChHHH
Q 011969 256 PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLF-IITGKG--PDKESY 332 (474)
Q Consensus 256 ~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~ivG~g--~~~~~~ 332 (474)
++++++++..|+....-+.+.+.+.+..+.+. +.++ +.+|.+ ...+.+
T Consensus 274 ~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~-----------------------------~~~~l~~~~~~~~~l~~~~ 324 (463)
T 2acv_A 274 PDKSVVFLCFGSMGVSFGPSQIREIALGLKHS-----------------------------GVRFLWSNSAEKKVFPEGF 324 (463)
T ss_dssp CTTCEEEEECCSSCCCCCHHHHHHHHHHHHHH-----------------------------TCEEEEECCCCGGGSCTTH
T ss_pred CCCceEEEEeccccccCCHHHHHHHHHHHHhC-----------------------------CCcEEEEECCCcccCChhH
Confidence 45666888889887323444454555555442 2444 445543 111233
Q ss_pred HHHHHHcCCCcEEEecCCCCcccHHHHHh--cccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecc----cccccc-cc
Q 011969 333 EEKIRRLRLKRVAFRTMWLSAEDYPLLLG--SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY----SCIEEL-VK 405 (474)
Q Consensus 333 ~~~~~~l~l~~V~f~g~~v~~~~~~~~l~--~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~----~~~~e~-v~ 405 (474)
.+....- +++...+ |+|+. .+|. .+|++|. -.| .+++.||+++|+|+|+... ...... +.
T Consensus 325 ~~~~~~~--~~~~v~~-w~pq~---~vL~h~~~~~fvt----h~G---~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv~ 391 (463)
T 2acv_A 325 LEWMELE--GKGMICG-WAPQV---EVLAHKAIGGFVS----HCG---WNSILESMWFGVPILTWPIYAEQQLNAFRLVK 391 (463)
T ss_dssp HHHHHHH--CSEEEES-SCCHH---HHHHSTTEEEEEE----CCC---HHHHHHHHHTTCCEEECCCSTTHHHHHHHHHH
T ss_pred HHhhccC--CCEEEEc-cCCHH---HHhCCCccCeEEe----cCC---chhHHHHHHcCCCeeeccchhhhHHHHHHHHH
Confidence 3322101 3677777 78764 4676 4666665 222 3599999999999999864 223344 46
Q ss_pred cCCcEEEe-C---------CHHHHHHHHHHHHh
Q 011969 406 VDKNGLLF-S---------SSSELADQLLMLFK 428 (474)
Q Consensus 406 ~~~~G~l~-~---------~~~~la~~i~~l~~ 428 (474)
..+.|+.. . +.++++++|.++++
T Consensus 392 ~~g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~ 424 (463)
T 2acv_A 392 EWGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMD 424 (463)
T ss_dssp TSCCEEESCSSCCTTCCCCCHHHHHHHHHHHTC
T ss_pred HcCeEEEEecccCCCCccccHHHHHHHHHHHHh
Confidence 77888887 1 57899999999986
|
| >1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7 | Back alignment and structure |
|---|
Probab=98.01 E-value=0.00025 Score=70.53 Aligned_cols=103 Identities=16% Similarity=0.157 Sum_probs=71.0
Q ss_pred CCCCeEEEEEee-cccCCCHH--HHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCChHHH
Q 011969 256 PNRPALVVSSTS-WTPDEDFG--ILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESY 332 (474)
Q Consensus 256 ~~~~~~i~~~G~-l~~~k~~~--~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~~ 332 (474)
.+++++++..|+ ..+.|... .+.+++..+.+ .++.++++|...+.+..
T Consensus 178 ~~~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~-----------------------------~~~~vvl~g~~~e~~~~ 228 (348)
T 1psw_A 178 SERPMIGFCPGAEFGPAKRWPHYHYAELAKQLID-----------------------------EGYQVVLFGSAKDHEAG 228 (348)
T ss_dssp SSSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHH-----------------------------TTCEEEECCCGGGHHHH
T ss_pred CCCcEEEEECCCCccccCCCCHHHHHHHHHHHHH-----------------------------CCCeEEEEeChhhHHHH
Confidence 345667777777 55555554 77777777765 26788888876655444
Q ss_pred HHHHHHcC----CCcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEec
Q 011969 333 EEKIRRLR----LKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS 396 (474)
Q Consensus 333 ~~~~~~l~----l~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~ 396 (474)
++..+..+ .+.+.+.|. .+-.++..+++.||++|. .++| .+-.|.|+|+|+|+--
T Consensus 229 ~~i~~~~~~~~~~~~~~l~g~-~sl~e~~ali~~a~l~I~---~Dsg-----~~HlAaa~g~P~v~lf 287 (348)
T 1psw_A 229 NEILAALNTEQQAWCRNLAGE-TQLDQAVILIAACKAIVT---NDSG-----LMHVAAALNRPLVALY 287 (348)
T ss_dssp HHHHTTSCHHHHTTEEECTTT-SCHHHHHHHHHTSSEEEE---ESSH-----HHHHHHHTTCCEEEEE
T ss_pred HHHHHhhhhccccceEeccCc-CCHHHHHHHHHhCCEEEe---cCCH-----HHHHHHHcCCCEEEEE
Confidence 44443332 123466676 888999999999999998 3444 3344999999999864
|
| >3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula} | Back alignment and structure |
|---|
Probab=97.98 E-value=0.00021 Score=72.18 Aligned_cols=103 Identities=15% Similarity=0.143 Sum_probs=72.9
Q ss_pred CCCCeEEEEEeecccCCC--HHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCChHHHH
Q 011969 256 PNRPALVVSSTSWTPDED--FGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYE 333 (474)
Q Consensus 256 ~~~~~~i~~~G~l~~~k~--~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~~~ 333 (474)
++++++++..|+-.+.|. .+...+.+..+.++ ++.++++|...+.+..+
T Consensus 183 ~~~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~-----------------------------g~~vvl~g~~~e~~~~~ 233 (349)
T 3tov_A 183 DTDILIGFNIGSAVPEKRWPAERFAHVADYFGRL-----------------------------GYKTVFFGGPMDLEMVQ 233 (349)
T ss_dssp TTCCEEEEECCCSSGGGCCCHHHHHHHHHHHHHH-----------------------------TCEEEECCCTTTHHHHH
T ss_pred CCCCEEEEeCCCCCccCCCCHHHHHHHHHHHHhC-----------------------------CCeEEEEeCcchHHHHH
Confidence 456667777665434444 45677777777652 46778888776666666
Q ss_pred HHHHHcCCCcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEec
Q 011969 334 EKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS 396 (474)
Q Consensus 334 ~~~~~l~l~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~ 396 (474)
+.++.++.+.+.+.|. .+-.++..+++.||++|. ..+| ..-+ |.|+|+|+|+--
T Consensus 234 ~i~~~~~~~~~~l~g~-~sl~e~~ali~~a~~~i~---~DsG----~~Hl-Aaa~g~P~v~lf 287 (349)
T 3tov_A 234 PVVEQMETKPIVATGK-FQLGPLAAAMNRCNLLIT---NDSG----PMHV-GISQGVPIVALY 287 (349)
T ss_dssp HHHHTCSSCCEECTTC-CCHHHHHHHHHTCSEEEE---ESSH----HHHH-HHTTTCCEEEEC
T ss_pred HHHHhcccccEEeeCC-CCHHHHHHHHHhCCEEEE---CCCC----HHHH-HHhcCCCEEEEE
Confidence 6666655445677777 888999999999999998 3344 2333 899999999974
|
| >2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... | Back alignment and structure |
|---|
Probab=97.85 E-value=0.0002 Score=79.50 Aligned_cols=182 Identities=14% Similarity=0.091 Sum_probs=119.6
Q ss_pred cCCCCCeEEEEEeecccCCCHHHH-HHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCCh--H
Q 011969 254 LKPNRPALVVSSTSWTPDEDFGIL-LEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK--E 330 (474)
Q Consensus 254 ~~~~~~~~i~~~G~l~~~k~~~~L-i~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~--~ 330 (474)
+.++.+ +++++.|++..|+.+++ +..+..+.+ |.+++........+++.|++... .
T Consensus 546 vdpd~l-~~g~vkRl~eYKRq~L~~l~~i~~~~~--------------------i~~~~~~~~~p~q~If~GKA~P~y~~ 604 (824)
T 2gj4_A 546 INPNSL-FDVQVKRIHEYKRQLLNCLHVITLYNR--------------------IKKEPNKFVVPRTVMIGGKAAPGYHM 604 (824)
T ss_dssp CCTTSE-EEEEESCCCGGGTHHHHHHHHHHHHHH--------------------HHHCTTSCCCCEEEEEECCCCTTCHH
T ss_pred cCCCcc-eEeeeecchhhcchhhHHHHHHHHHHH--------------------HHhCCCCCCCCEEEEEEEeCCHhHHH
Confidence 445555 88999999999999998 777776643 11111111225899999988532 1
Q ss_pred H------HHHHHHHcC----C-C--cEEEecCCCCcccHHHHHhcccEEEeeccCCC--CCCCchHHHHHHhcCCcEEEe
Q 011969 331 S------YEEKIRRLR----L-K--RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS--GLDLPMKVVDMFGCGLPVCAV 395 (474)
Q Consensus 331 ~------~~~~~~~l~----l-~--~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~--~e~~p~kv~Eama~G~PVia~ 395 (474)
. +.+.++... + + +|.|+.. .+.+-...++..||+.++ +|. .|.+|+.=+=+|..|.+.|++
T Consensus 605 aK~iIkli~~va~~in~Dp~v~~~lKVvFl~n-YdvslA~~I~~gaDv~l~---~S~ag~EAsGTs~MKamlNGaLtigt 680 (824)
T 2gj4_A 605 AKMIIKLITAIGDVVNHDPVVGDRLRVIFLEN-YRVSLAEKVIPAADLSEQ---ISTAGTEASGTGNMKFMLNGALTIGT 680 (824)
T ss_dssp HHHHHHHHHHHHHHHTTCTTTGGGEEEEEETT-CCHHHHHHHGGGCSEEEE---CCCTTSCSCCSHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHHHHHHHhccCcccCCceEEEEECC-CCHHHHHHHhhhcceeec---CCCCCCCCCchHHHHHHHcCceEEEE
Confidence 1 334444331 2 3 6999876 678888899999999999 454 699999999999999999998
Q ss_pred cccccccccc--cCCcEEEeC-CHHHHHHHHH-------HHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHHHHHH
Q 011969 396 SYSCIEELVK--VDKNGLLFS-SSSELADQLL-------MLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLI 465 (474)
Q Consensus 396 ~~~~~~e~v~--~~~~G~l~~-~~~~la~~i~-------~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 465 (474)
--|...|+.+ ..+||+++. ..+++ ..+. .+++. ++ ..+++-.++.. ..++|... +...+++
T Consensus 681 lDGanvEi~e~vG~~Ngf~FG~~~~ev-~~l~~~~~~a~~~Y~~---~~-~l~~v~d~i~~--g~fs~~~~--~~y~~ly 751 (824)
T 2gj4_A 681 MDGANVEMAEEAGEENFFIFGMRVEDV-DRLDQRGYNAQEYYDR---IP-ELRQIIEQLSS--GFFSPKQP--DLFKDIV 751 (824)
T ss_dssp SCTTHHHHHHHHCGGGSEECSCCHHHH-HHHHHHCCCHHHHHHH---CH-HHHHHHHHHHH--TTTCTTST--TTTHHHH
T ss_pred ecCccchhhhccCCCCEEEeCCcHHHH-HHHHHcCCCHHHHhcC---CH-HHHHHHHHHHh--CCCCCCCh--HHHHHHH
Confidence 7665556543 457999997 46666 4442 23332 22 34444444443 35777654 2255555
Q ss_pred HHHh
Q 011969 466 TEVI 469 (474)
Q Consensus 466 ~~~~ 469 (474)
.++.
T Consensus 752 ~~l~ 755 (824)
T 2gj4_A 752 NMLM 755 (824)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5553
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=97.83 E-value=0.00045 Score=76.56 Aligned_cols=142 Identities=14% Similarity=0.086 Sum_probs=105.4
Q ss_pred cCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCC-hHHHHHHHHHcCC--CcEEE
Q 011969 270 PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD-KESYEEKIRRLRL--KRVAF 346 (474)
Q Consensus 270 ~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~-~~~~~~~~~~l~l--~~V~f 346 (474)
..|=-+..++....+.++ .|+-+|++...+.. .+.+++.+++.|+ ++|.|
T Consensus 532 ~~Ki~p~~~~~W~~IL~~---------------------------vP~S~L~Ll~~~~~~~~~l~~~~~~~gi~~~r~~f 584 (723)
T 4gyw_A 532 LYKIDPSTLQMWANILKR---------------------------VPNSVLWLLRFPAVGEPNIQQYAQNMGLPQNRIIF 584 (723)
T ss_dssp GGGCCHHHHHHHHHHHHH---------------------------CSSEEEEEEETTGGGHHHHHHHHHHTTCCGGGEEE
T ss_pred cccCCHHHHHHHHHHHHh---------------------------CCCCeEEEEeCcHHHHHHHHHHHHhcCCCcCeEEE
Confidence 445556677777777664 79999988876543 4678888999999 59999
Q ss_pred ecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEeccccccc-----ccc-cCCcEEEeCCHHHHH
Q 011969 347 RTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEE-----LVK-VDKNGLLFSSSSELA 420 (474)
Q Consensus 347 ~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~~~~e-----~v~-~~~~G~l~~~~~~la 420 (474)
.+. .+.++....|+.+|+++= +...+=+++.+||+.+|+|||+-....+.. ++. -|-..+++.|.++..
T Consensus 585 ~~~-~~~~~~l~~~~~~Di~LD----t~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~gl~e~ia~~~~~Y~ 659 (723)
T 4gyw_A 585 SPV-APKEEHVRRGQLADVCLD----TPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLELIAKNRQEYE 659 (723)
T ss_dssp EEC-CCHHHHHHHGGGCSEEEC----CSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHHTCGGGBCSSHHHHH
T ss_pred CCC-CCHHHHHHHhCCCeEEeC----CCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHcCCcccccCCHHHHH
Confidence 998 999999999999999996 433345789999999999999975322211 111 122334567899999
Q ss_pred HHHHHHHhCCCCCHHHHHHHHHHHHHh
Q 011969 421 DQLLMLFKGFPDDSDVLKKLRNGTLEM 447 (474)
Q Consensus 421 ~~i~~l~~~~~~~~~~~~~~~~~~~~~ 447 (474)
+....+.++ ++.++++|+..++.
T Consensus 660 ~~a~~la~d----~~~l~~lr~~l~~~ 682 (723)
T 4gyw_A 660 DIAVKLGTD----LEYLKKVRGKVWKQ 682 (723)
T ss_dssp HHHHHHHHC----HHHHHHHHHHHHHH
T ss_pred HHHHHHhcC----HHHHHHHHHHHHHH
Confidence 999999884 88888888777653
|
| >3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A* | Back alignment and structure |
|---|
Probab=97.62 E-value=0.00067 Score=75.02 Aligned_cols=222 Identities=14% Similarity=0.073 Sum_probs=126.8
Q ss_pred hhCCCcEEEEecCchhhhhhhccCCC----chHHHHHHHHHHHHhhhcCEEEEeCHHHHHHHHHHhCCc-eEEEeCCCC-
Q 011969 124 SLRRSAFIVDWHNFGYTLLSLSLGRR----SHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQNWGIK-ATVLYDQPP- 197 (474)
Q Consensus 124 ~~~~~~~i~~~h~~~~~~~~~~~~~~----~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~~l~~~~~~~-~~vi~n~~~- 197 (474)
+..+..+|-+||+.+...+....... .......+.+. ...+..|.+++.|+.+.+.+.+.++.+ -.++..|-|
T Consensus 433 k~~~~~~iq~wHG~~lK~~g~d~~~~~~~~~~~~~~~~~~~-~~~~~~D~~~~~s~~~~~~~~~~f~~~~~~i~~~G~PR 511 (729)
T 3l7i_A 433 KKENQTYIQTWHGTPLKRLANDMKVVRMPGTTTPKYKRNFN-RETSRWDYLISPNRYSTEIFRSAFWMDEERILEIGYPR 511 (729)
T ss_dssp CCTTCEEEECCSSCCSBCCGGGCSCCCCTTCCHHHHHHHHH-HHHTTCSEEEESSHHHHHHHHHHTCCCGGGEEESCCGG
T ss_pred cCCCcEEEECCCCCchhhccccccccccccccCHHHHHHHH-HhhccCCEEEeCCHHHHHHHHHHhCCCcceEEEcCCCc
Confidence 44567788899998533222111110 11111111111 223567999999999999898888876 456666644
Q ss_pred --CCC-CCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhcccccccccCCCCCeEEEEEeecccCCC-
Q 011969 198 --EFF-HPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDED- 273 (474)
Q Consensus 198 --~~f-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~l~~~k~- 273 (474)
..| .+...+.+..++++++ ++.+++ +|+|.-+|.....
T Consensus 512 ~D~l~~~~~~~~~~~~~~~~~~-------------------------------------~~~~kk-~ILyaPT~r~~~~~ 553 (729)
T 3l7i_A 512 NDVLVNRANDQEYLDEIRTHLN-------------------------------------LPSDKK-VIMYAPTWRDDEFV 553 (729)
T ss_dssp GHHHHHSTTCHHHHHHHHHHTT-------------------------------------CCSSCE-EEEECCCCCGGGCC
T ss_pred hHHHhcccchHHHHHHHHHHhC-------------------------------------CCCCCe-EEEEeeeeeCCccc
Confidence 223 2223334555666665 334444 8899988776421
Q ss_pred --------HHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCChHHHHHHHHHcCC-CcE
Q 011969 274 --------FGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRL-KRV 344 (474)
Q Consensus 274 --------~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~~~l~l-~~V 344 (474)
...-++.+.... .+++.+++-.. |. +.+.....+. +.+
T Consensus 554 ~~~~~~~~~~~~~~~l~~~l-----------------------------~~~~~li~r~H-p~---~~~~~~~~~~~~~~ 600 (729)
T 3l7i_A 554 SKGKYLFELKIDLDNLYKEL-----------------------------GDDYVILLRMH-YL---ISNALDLSGYENFA 600 (729)
T ss_dssp GGGSSCCCCTTCHHHHHHHH-----------------------------TTTEEEEECCC-HH---HHTTCCCTTCTTTE
T ss_pred cccccccchhhHHHHHHHHc-----------------------------CCCeEEEEecC-cc---hhccccccccCCcE
Confidence 111122222211 24677776553 21 1111111122 344
Q ss_pred EEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecc--c-------ccccccccCCcEEEeCC
Q 011969 345 AFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY--S-------CIEELVKVDKNGLLFSS 415 (474)
Q Consensus 345 ~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~--~-------~~~e~v~~~~~G~l~~~ 415 (474)
.-... ..++..++..||++|. .-+ ..++|++..++|||.... . |...-..+.-.|-++.+
T Consensus 601 ~~~~~---~~di~~ll~~aD~lIT---DyS-----Sv~fD~~~l~kPiif~~~D~~~Y~~~~rg~y~d~~~~~pg~~~~~ 669 (729)
T 3l7i_A 601 IDVSN---YNDVSELFLISDCLIT---DYS-----SVMFDYGILKRPQFFFAYDIDKYDKGLRGFYMNYMEDLPGPIYTE 669 (729)
T ss_dssp EECTT---CSCHHHHHHTCSEEEE---SSC-----THHHHHGGGCCCEEEECTTTTTTTSSCCSBSSCTTSSSSSCEESS
T ss_pred EeCCC---CcCHHHHHHHhCEEEe---ech-----HHHHhHHhhCCCEEEecCCHHHHhhccCCcccChhHhCCCCeECC
Confidence 44433 5799999999999997 333 489999999999998731 1 11111222345777889
Q ss_pred HHHHHHHHHHHHh
Q 011969 416 SSELADQLLMLFK 428 (474)
Q Consensus 416 ~~~la~~i~~l~~ 428 (474)
.++|.++|.....
T Consensus 670 ~~eL~~~i~~~~~ 682 (729)
T 3l7i_A 670 PYGLAKELKNLDK 682 (729)
T ss_dssp HHHHHHHHTTHHH
T ss_pred HHHHHHHHhhhhc
Confidence 9999999998765
|
| >3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A* | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0039 Score=61.23 Aligned_cols=66 Identities=11% Similarity=0.073 Sum_probs=51.2
Q ss_pred EEEEEeCCC-ChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecc
Q 011969 319 LFIITGKGP-DKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY 397 (474)
Q Consensus 319 ~l~ivG~g~-~~~~~~~~~~~l~l~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~ 397 (474)
..+++|.+. ..+++++.+++. +++.+.++ .+++..+|..||++|+. + |.++.|++++|+|.|....
T Consensus 186 i~vv~G~~~~~~~~l~~~~~~~--~~v~v~~~---~~~m~~~m~~aDlvI~~-----g---G~T~~E~~~~g~P~i~ip~ 252 (282)
T 3hbm_A 186 ISIATSSSNPNLKKLQKFAKLH--NNIRLFID---HENIAKLMNESNKLIIS-----A---SSLVNEALLLKANFKAICY 252 (282)
T ss_dssp EEEEECTTCTTHHHHHHHHHTC--SSEEEEES---CSCHHHHHHTEEEEEEE-----S---SHHHHHHHHTTCCEEEECC
T ss_pred EEEEECCCchHHHHHHHHHhhC--CCEEEEeC---HHHHHHHHHHCCEEEEC-----C---cHHHHHHHHcCCCEEEEeC
Confidence 446778764 346666665543 48999988 79999999999999982 2 3699999999999999753
|
| >2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A | Back alignment and structure |
|---|
Probab=96.54 E-value=0.0018 Score=61.52 Aligned_cols=73 Identities=10% Similarity=0.039 Sum_probs=52.4
Q ss_pred cEEEecCCCCcccHHHHHh-cccEEEeeccCCCCCCCchHHHHHHhcCCcEEEeccccc--------ccccccCCcEEEe
Q 011969 343 RVAFRTMWLSAEDYPLLLG-SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI--------EELVKVDKNGLLF 413 (474)
Q Consensus 343 ~V~f~g~~v~~~~~~~~l~-~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~~~--------~e~v~~~~~G~l~ 413 (474)
++...++ .+++..+|. .||++|+ -.| ..++.|++++|+|.|....+.. ++.+...+.++++
T Consensus 115 ~v~v~~f---~~~m~~~l~~~AdlvIs----haG---agTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~~G~~~~~ 184 (224)
T 2jzc_A 115 KVIGFDF---STKMQSIIRDYSDLVIS----HAG---TGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVELGYVWSC 184 (224)
T ss_dssp EEEECCS---SSSHHHHHHHHCSCEEE----SSC---HHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHHHSCCCEE
T ss_pred eEEEeec---cchHHHHHHhcCCEEEE----CCc---HHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHHCCCEEEc
Confidence 4555555 489999999 9999997 223 4599999999999999876421 2234343445554
Q ss_pred CCHHHHHHHHHHH
Q 011969 414 SSSSELADQLLML 426 (474)
Q Consensus 414 ~~~~~la~~i~~l 426 (474)
++++|+++|..+
T Consensus 185 -~~~~L~~~i~~l 196 (224)
T 2jzc_A 185 -APTETGLIAGLR 196 (224)
T ss_dssp -CSCTTTHHHHHH
T ss_pred -CHHHHHHHHHHH
Confidence 677788888877
|
| >2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A* | Back alignment and structure |
|---|
Probab=94.43 E-value=0.094 Score=51.38 Aligned_cols=133 Identities=13% Similarity=0.052 Sum_probs=78.5
Q ss_pred CCCeEEEEEeecccCCCHH--HHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCCh-HHHH
Q 011969 257 NRPALVVSSTSWTPDEDFG--ILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK-ESYE 333 (474)
Q Consensus 257 ~~~~~i~~~G~l~~~k~~~--~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~-~~~~ 333 (474)
+++++++..|.=.+.|... ...+.+..+.+ .+++++++++++.. +..+
T Consensus 177 ~~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~-----------------------------~~~~vvl~~g~~~e~~~~~ 227 (326)
T 2gt1_A 177 AGEYAVFLHATTRDDKHWPEEHWRELIGLLAD-----------------------------SGIRIKLPWGAPHEEERAK 227 (326)
T ss_dssp TTSEEEEECCCSSGGGSCCHHHHHHHHHHTTT-----------------------------TCCEEEECCSSHHHHHHHH
T ss_pred CCCEEEEEeCCCCccccCCHHHHHHHHHHHHH-----------------------------CCCcEEEecCCHHHHHHHH
Confidence 4555666666544445443 56666665533 35778887434433 3333
Q ss_pred HHHHHcCCCcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecccccccccccC-CcEE-
Q 011969 334 EKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVD-KNGL- 411 (474)
Q Consensus 334 ~~~~~l~l~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~~~~e~v~~~-~~G~- 411 (474)
+..+.. +++.+.|. .+-.++..+++.||++|. ..+| + .=+ |.|+|+|+|+--.+......... ....
T Consensus 228 ~i~~~~--~~~~l~g~-~sl~el~ali~~a~l~I~---~DSG---~-~Hl-Aaa~g~P~v~lfg~t~p~~~~P~~~~~~~ 296 (326)
T 2gt1_A 228 RLAEGF--AYVEVLPK-MSLEGVARVLAGAKFVVS---VDTG---L-SHL-TAALDRPNITVYGPTDPGLIGGYGKNQMV 296 (326)
T ss_dssp HHHTTC--TTEEECCC-CCHHHHHHHHHTCSEEEE---ESSH---H-HHH-HHHTTCCEEEEESSSCHHHHCCCSSSEEE
T ss_pred HHHhhC--CcccccCC-CCHHHHHHHHHhCCEEEe---cCCc---H-HHH-HHHcCCCEEEEECCCChhhcCCCCCCceE
Confidence 333322 35777787 889999999999999998 3444 2 334 77899999987322111111111 1111
Q ss_pred E------e-C-CHHHHHHHHHHHHhC
Q 011969 412 L------F-S-SSSELADQLLMLFKG 429 (474)
Q Consensus 412 l------~-~-~~~~la~~i~~l~~~ 429 (474)
+ . + +++++.+++.++++.
T Consensus 297 ~~~~~~cm~~I~~~~V~~~i~~~l~~ 322 (326)
T 2gt1_A 297 CRAPGNELSQLTANAVKQFIEENAEK 322 (326)
T ss_dssp EECGGGCGGGCCHHHHHHHHHHTTTT
T ss_pred ecCCcccccCCCHHHHHHHHHHHHHH
Confidence 1 1 1 588888888888764
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 474 | ||||
| d2bisa1 | 437 | c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyro | 1e-04 |
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 437 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Score = 42.1 bits (97), Expect = 1e-04
Identities = 33/162 (20%), Positives = 58/162 (35%), Gaps = 10/162 (6%)
Query: 312 QYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHT 371
+ + + FII GKG + + + V T LS E L GS D +
Sbjct: 278 KKEFQEMRFIIIGKGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVD---FVII 334
Query: 372 SSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFS--SSSELADQLLMLFKG 429
S + ++ G A + + +++ ++ G+L ELA+ +L +
Sbjct: 335 PSYFEPFGLVALEAMCLGAIPIASAVGGLRDIIT-NETGILVKAGDPGELANAILKALE- 392
Query: 430 FPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEVISQ 471
L K R + +S W E + K T I +
Sbjct: 393 --LSRSDLSKFRENCKKRAMSFSWEKSAERYVK-AYTGSIDR 431
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 474 | |||
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 100.0 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 100.0 | |
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 100.0 | |
| d2bfwa1 | 196 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.89 | |
| d2f9fa1 | 166 | First mannosyl transferase WbaZ {Archaeoglobus ful | 99.88 | |
| d1uqta_ | 456 | Trehalose-6-phosphate synthase, OtsA {Escherichia | 99.81 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 99.32 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 98.98 | |
| d1rrva_ | 401 | TDP-vancosaminyltransferase GftD {Amycolatopsis or | 98.92 | |
| d1v4va_ | 373 | UDP-N-acetylglucosamine 2-epimerase {Thermus therm | 98.84 | |
| d1iira_ | 401 | UDP-glucosyltransferase GtfB {Amycolatopsis orient | 98.62 | |
| d1o6ca_ | 377 | UDP-N-acetylglucosamine 2-epimerase {Bacillus subt | 98.56 | |
| d1f6da_ | 376 | UDP-N-acetylglucosamine 2-epimerase {Escherichia c | 98.4 | |
| d2acva1 | 461 | Triterpene UDP-glucosyl transferase UGT71G1 {Medic | 98.4 | |
| d2c1xa1 | 450 | UDP glucose:flavonoid 3-o-glucosyltransferase {Gra | 98.2 | |
| d2pq6a1 | 473 | (Iso)flavonoid glycosyltransferase {Medicago trunc | 97.83 | |
| d1pswa_ | 348 | ADP-heptose LPS heptosyltransferase II {Escherichi | 97.36 | |
| d2vcha1 | 471 | Hydroquinone glucosyltransferase {Thale cress (Ara | 97.18 | |
| d2gj4a1 | 824 | Glycogen phosphorylase {Rabbit (Oryctolagus cunicu | 94.75 | |
| d1l5wa_ | 796 | Maltodextrin phosphorylase (MALP) {Escherichia col | 94.59 | |
| d1ygpa_ | 876 | Glycogen phosphorylase {Baker's yeast (Saccharomyc | 84.3 | |
| d2ez9a1 | 183 | Pyruvate oxidase {Lactobacillus plantarum [TaxId: | 83.35 |
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=100.00 E-value=2.2e-32 Score=278.33 Aligned_cols=381 Identities=17% Similarity=0.117 Sum_probs=250.4
Q ss_pred CCCCchHHH-HHHHHHhhCCCeEEEEecCCCCCCcce-----------------eccCCeEEEEeecCCCC--CCCCCch
Q 011969 15 LGRSPRMQY-QALSLARQMSLEVDVVAYGGSKPHAAI-----------------LEHPSIHIHTMTQWPTI--PRGLPKV 74 (474)
Q Consensus 15 ~g~~~r~~~-~a~~l~~~~g~eV~Vv~~~~~~~~~~~-----------------~~~~gi~i~~~~~~~~~--~~~~~~~ 74 (474)
.||.+|..+ .+.+|+++ ||+|+|+++.......+. ....++.++++...... .......
T Consensus 15 ~GG~~~~~~~La~~L~~~-Gh~V~Vvtp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (437)
T d2bisa1 15 VGGLAEALTAISEALASL-GHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRIGGGLLDSEDVYGPGW 93 (437)
T ss_dssp SSSHHHHHHHHHHHHHHT-TCEEEEEEECTTSSCCEEEEEEECSSSEEEEEEEEEEETTEEEEEEESSGGGCSCTTCSHH
T ss_pred cCCHHHHHHHHHHHHHHc-CCEEEEEecCCCccchhhccceeecccccceeeeeeccCCeEEEecCccccccccccccch
Confidence 366555554 57788886 999999996543221111 22346777776632110 1111111
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhcCCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhh---ccCCCch
Q 011969 75 LKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSL---SLGRRSH 151 (474)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~---~~~~~~~ 151 (474)
.................+..++.....||+||+|++ .+.+++.++++..++|+|++.|+..+..... .......
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pDiIh~~~~---~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~ 170 (437)
T d2bisa1 94 DGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDW---HTVFAGALIKKYFKIPAVFTIHRLNKSKLPAFYFHEAGLSE 170 (437)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSSCCCSEEEEETG---GGHHHHHHHHHHHCCCEEEEESSCCCCCEEHHHHHHTTCGG
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCh---hhhhHhhhhhccccCceeEEEeeccccccchhhhhhccchh
Confidence 111111111112222344455555567999999984 4455677777888999999999975311000 0000000
Q ss_pred H-HHHHHHHHHHHhhhcCEEEEeCHHHHHHHHHHh---CCceEEEeCCCC-CCCCCCC-----hHHHHHHHHhhhhccCC
Q 011969 152 F-VSIYRWIEKYYGKMANGCLCVTQAMQHELAQNW---GIKATVLYDQPP-EFFHPTS-----LEEKHELFCRLNKILHQ 221 (474)
Q Consensus 152 ~-~~~~~~~e~~~~~~ad~vi~vS~~~~~~l~~~~---~~~~~vi~n~~~-~~f~~~~-----~~~~~~~~~~l~~~~~~ 221 (474)
+ .......++...+.+|.+++++..........+ ..++.+++|+.+ +.|.+.. ...+..+..+++
T Consensus 171 ~~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~~~~~~ki~vi~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~----- 245 (437)
T d2bisa1 171 LAPYPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFG----- 245 (437)
T ss_dssp GCCSSEECHHHHHHHHSSEEEESCHHHHHHTHHHHGGGTTTEEECCCCCCTTTSCGGGCCSCHHHHHHHHHHHTT-----
T ss_pred hhhHHHHHHHHHHHHhhhhhcccchhhhhhhhhhhccccCceEEEecccccccccccccchhhHHHHHhhhhhhh-----
Confidence 0 000113456667789999999998877654443 345899999844 5554431 122334444444
Q ss_pred CCCccccccccccCCcCcchhhhhcccccccccCCCCCeEEEEEeeccc-CCCHHHHHHHHHHhHHHHhhhhccCCCchh
Q 011969 222 PLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTP-DEDFGILLEAALMYDRRVAAILNEDDSTNE 300 (474)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~l~~-~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~ 300 (474)
......++|+|++.. .||++.+++|+..+..+
T Consensus 246 ----------------------------------~~~~~~i~~~G~~~~~~Kg~~~ll~a~~~~~~~------------- 278 (437)
T d2bisa1 246 ----------------------------------MDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSK------------- 278 (437)
T ss_dssp ----------------------------------CCSCEEEEEESCBCSSSSCHHHHHHHHHHHTTS-------------
T ss_pred ----------------------------------ccCCceEEEeecccccchhHHHHHhhhcccccc-------------
Confidence 222348999999964 69999999999987431
Q ss_pred hHhHhhhcCCccccCCCEEEEEEeCCCChHH-HHHHHHHcCCCcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCc
Q 011969 301 EVFLKEISDGKQYLYPRLLFIITGKGPDKES-YEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLP 379 (474)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~-~~~~~~~l~l~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p 379 (474)
...++++|+|+|.|+.... ..+...+...+++.+.|. ++.+++..+++.||++++ +|..|++|
T Consensus 279 ------------~~~~~~~lvi~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~adi~v~---~s~~e~~~ 342 (437)
T d2bisa1 279 ------------KEFQEMRFIIIGKGDPELEGWARSLEEKHGNVKVITEM-LSREFVRELYGSVDFVII---PSYFEPFG 342 (437)
T ss_dssp ------------GGGGGEEEEEECCBCHHHHHHHHHHHHTCTTEEEECSC-CCHHHHHHHHTTCSEEEE---CCSCCSSC
T ss_pred ------------cccccceeeeecccccccccchhhhccccccceecccc-CcHHHHHHHHhhhccccc---cccccccc
Confidence 0247899999999875432 222333322234555554 999999999999999999 68889999
Q ss_pred hHHHHHHhcCCcEEEecccccccccccCCcEEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHH
Q 011969 380 MKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEW 457 (474)
Q Consensus 380 ~kv~Eama~G~PVia~~~~~~~e~v~~~~~G~l~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~ 457 (474)
++++|||+||+|||+++.|+..|++++ ++|++++ |+++|+++|.+++++ +++.+++|++++++.+++++|+...
T Consensus 343 ~~~~Eama~G~Pvi~~~~g~~~e~i~~-~~G~~~~~~d~~~la~~i~~ll~~---~~~~~~~~~~~~~~~~~~~s~~~~a 418 (437)
T d2bisa1 343 LVALEAMCLGAIPIASAVGGLRDIITN-ETGILVKAGDPGELANAILKALEL---SRSDLSKFRENCKKRAMSFSWEKSA 418 (437)
T ss_dssp HHHHHHHTTTCEEEEESCTTHHHHCCT-TTCEEECTTCHHHHHHHHHHHHTT---TTSCTHHHHHHHHHHHHHSCHHHHH
T ss_pred hHHHHHHHCCCCEEEeCCCCcHHhEEC-CcEEEECCCCHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 999999999999999999999998865 6899986 799999999999875 5778899999999988889998877
Q ss_pred HHHHHHHHHHHhhcc
Q 011969 458 EEHAKPLITEVISQF 472 (474)
Q Consensus 458 ~~~~~~~~~~~~~~~ 472 (474)
+++. .+++.++.+.
T Consensus 419 ~~~~-~iY~~~i~r~ 432 (437)
T d2bisa1 419 ERYV-KAYTGSIDRA 432 (437)
T ss_dssp HHHH-HHHHTCSCCB
T ss_pred HHHH-HHHHHHHHhH
Confidence 6644 4566666554
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.2e-33 Score=278.57 Aligned_cols=342 Identities=12% Similarity=0.043 Sum_probs=231.3
Q ss_pred CCCCCCchHH-HHHHHHHhhCCCeEEEEecCCCCCCcceeccCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHHHH
Q 011969 13 GDLGRSPRMQ-YQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFML 91 (474)
Q Consensus 13 ~~~g~~~r~~-~~a~~l~~~~g~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (474)
..+||.+|.. ..|.+|+++ ||+|+|+|...... ...+++++.++. ............. ..
T Consensus 10 ~p~GG~e~~~~~la~~L~~~-G~~V~v~~~~~~~~-----~~~~~~~~~~~~-----~~~~~~~~~~~~~-~~------- 70 (370)
T d2iw1a1 10 FPFGGLQRDFMRIASTVAAR-GHHVRVYTQSWEGD-----CPKAFELIQVPV-----KSHTNHGRNAEYY-AW------- 70 (370)
T ss_dssp CTTCHHHHHHHHHHHHHHHT-TCCEEEEESEECSC-----CCTTCEEEECCC-----CCSSHHHHHHHHH-HH-------
T ss_pred CCCCCHHHHHHHHHHHHHHC-CCEEEEEecCCCCC-----CCCceEEEEcCc-----cccccchhhHHHH-HH-------
Confidence 4578777755 567888886 99999999653321 134788888872 1111111111111 11
Q ss_pred HHHHhhhcCCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhh-hhhcc---CCCchHHHHHHHHHHHHh--h
Q 011969 92 LWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTL-LSLSL---GRRSHFVSIYRWIEKYYG--K 165 (474)
Q Consensus 92 ~~~~~~~~~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~-~~~~~---~~~~~~~~~~~~~e~~~~--~ 165 (474)
+...+ +..++|++|.++.... + . ++..++..+.. ..... .........+...++... .
T Consensus 71 ~~~~~-~~~~~d~v~~~~~~~~--~------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (370)
T d2iw1a1 71 VQNHL-KEHPADRVVGFNKMPG--L------------D-VYFAADVCYAEKVAQEKGFLYRLTSRYRHYAAFERATFEQG 134 (370)
T ss_dssp HHHHH-HHSCCSEEEESSCCTT--C------------S-EEECCSCCHHHHHHHHCCHHHHTSHHHHHHHHHHHHHHSTT
T ss_pred HHHHH-HhcccceeeecccCch--H------------H-HHHHhhcccceeeeeecCccccccchhchhHHHHHHHHhhc
Confidence 11111 2378999998764211 0 0 11111110000 00000 001111122233343333 3
Q ss_pred hcCEEEEeCHHHHHHHHHHhCCc---eEEEeCCCC-CCCCC-CChHHHHHHHHhhhhccCCCCCccccccccccCCcCcc
Q 011969 166 MANGCLCVTQAMQHELAQNWGIK---ATVLYDQPP-EFFHP-TSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKAD 240 (474)
Q Consensus 166 ~ad~vi~vS~~~~~~l~~~~~~~---~~vi~n~~~-~~f~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (474)
.++.+++.+....+.+.+.++.. +.+++|+.+ +.+.+ .....+..++..++
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~vi~~gv~~~~~~~~~~~~~~~~~r~~~~------------------------ 190 (370)
T d2iw1a1 135 KSTKLMMLTDKQIADFQKHYQTEPERFQILPPGIYPDRKYSEQIPNSREIYRQKNG------------------------ 190 (370)
T ss_dssp CCCEEEESCHHHHHHHHHHHCCCGGGEEECCCCCCGGGSGGGSCTTHHHHHHHHTT------------------------
T ss_pred cCceEEEecHHHHHHHHHhcCCCcceEEEEEeecccccccccCchhhhhhhhhccC------------------------
Confidence 57899999999988888777654 789999844 33322 22334455555555
Q ss_pred hhhhhcccccccccCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEE
Q 011969 241 ETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLF 320 (474)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 320 (474)
++++.+ +++++|++.+.||++.+++|++.+.++ .++..+
T Consensus 191 -------------~~~~~~-~i~~~gr~~~~Kg~~~li~a~~~l~~~---------------------------~~~~~~ 229 (370)
T d2iw1a1 191 -------------IKEQQN-LLLQVGSDFGRKGVDRSIEALASLPES---------------------------LRHNTL 229 (370)
T ss_dssp -------------CCTTCE-EEEEECSCTTTTTHHHHHHHHHTSCHH---------------------------HHHTEE
T ss_pred -------------CCccce-EEEEEeccccccchhhhcccccccccc---------------------------ccccee
Confidence 233343 899999999999999999999988663 466677
Q ss_pred EEEeCCCChHHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecccc
Q 011969 321 IITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC 399 (474)
Q Consensus 321 ~ivG~g~~~~~~~~~~~~l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~~ 399 (474)
.++|+++..+++++.+++++. +++.|.|. .+++..+|+.||++|+ ||..|++|++++|||+||+|||+++.++
T Consensus 230 ~ii~g~~~~~~~~~~~~~~~~~~~v~~~g~---~~~~~~~~~~adv~v~---ps~~E~~~~~~~EAma~G~PvI~s~~~g 303 (370)
T d2iw1a1 230 LFVVGQDKPRKFEALAEKLGVRSNVHFFSG---RNDVSELMAAADLLLH---PAYQEAAGIVLLEAITAGLPVLTTAVCG 303 (370)
T ss_dssp EEEESSSCCHHHHHHHHHHTCGGGEEEESC---CSCHHHHHHHCSEEEE---CCSCCSSCHHHHHHHHHTCCEEEETTST
T ss_pred eecccccccccccccccccccccccccccc---cccccccccccccccc---ccccccccceeeecccCCeeEEEeCCCC
Confidence 777777777889999999998 79999987 6899999999999999 6888999999999999999999999999
Q ss_pred cccccccCCcEEEe-C--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHHHHHH
Q 011969 400 IEELVKVDKNGLLF-S--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLI 465 (474)
Q Consensus 400 ~~e~v~~~~~G~l~-~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 465 (474)
..|++.++.+|+++ + |+++|+++|.+++++ ++.+++|+++++++++.+.|. .|.+.+..++
T Consensus 304 ~~e~i~~~~~G~l~~~~~d~~~la~~i~~ll~d----~~~~~~~~~~ar~~~~~~~~~-~~~~~~~~ii 367 (370)
T d2iw1a1 304 YAHYIADANCGTVIAEPFSQEQLNEVLRKALTQ----SPLRMAWAENARHYADTQDLY-SLPEKAADII 367 (370)
T ss_dssp TTHHHHHHTCEEEECSSCCHHHHHHHHHHHHHC----HHHHHHHHHHHHHHHHHSCCS-CHHHHHHHHH
T ss_pred hHHHhcCCCceEEEcCCCCHHHHHHHHHHHHcC----HHHHHHHHHHHHHHHHHhChh-HHHHHHHHHH
Confidence 99999999999765 3 799999999999994 899999999999887555442 2444444443
|
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=100.00 E-value=1.5e-31 Score=279.40 Aligned_cols=294 Identities=12% Similarity=0.057 Sum_probs=204.4
Q ss_pred CCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhh------hhccCCCchHH------HHHHHHHHHHhhhc
Q 011969 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLL------SLSLGRRSHFV------SIYRWIEKYYGKMA 167 (474)
Q Consensus 100 ~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~------~~~~~~~~~~~------~~~~~~e~~~~~~a 167 (474)
.+||+||+|+....... .....++..++|+|++.|+..+... .........+. .-....++.....|
T Consensus 129 ~~pDIvH~h~~~~~l~~-~~~~~~~~~~ip~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 207 (477)
T d1rzua_ 129 WRPDMVHAHDWQAAMTP-VYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTA 207 (477)
T ss_dssp CCCSEEEEEHHHHTTHH-HHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHHC
T ss_pred CCCCEEEecchhHHHHH-HHHHHhhCCCCCEEEEEecccccccCCHHHHHHhhcchhhcccccccccchhHHHHHHHHhh
Confidence 68999999984222222 1223345667999999998642111 00000000000 00012345566789
Q ss_pred CEEEEeCHHHHHHHHHH-h-----------CCceEEEeCCC-CCCCCCCCh----------------HHHHHHHHhhhhc
Q 011969 168 NGCLCVTQAMQHELAQN-W-----------GIKATVLYDQP-PEFFHPTSL----------------EEKHELFCRLNKI 218 (474)
Q Consensus 168 d~vi~vS~~~~~~l~~~-~-----------~~~~~vi~n~~-~~~f~~~~~----------------~~~~~~~~~l~~~ 218 (474)
|.++++|...++++... + ..++.+++|+. .+.|.|... .....++.+.+
T Consensus 208 d~~~~vs~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-- 285 (477)
T d1rzua_ 208 TALSTVSPSYAEEILTAEFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFR-- 285 (477)
T ss_dssp SEEEESCHHHHHHTTSHHHHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHT--
T ss_pred hhhhhccHHHHHHHHHHhcCcchhhhhhhccccEEEEECCcchhhccccccccccccchhhhHHHhhhhHHHHHHhcc--
Confidence 99999999887764321 1 12378999984 455655311 01112222222
Q ss_pred cCCCCCccccccccccCCcCcchhhhhcccccccccCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCc
Q 011969 219 LHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDST 298 (474)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~ 298 (474)
+..+...+++|+|++.+.||++.|++|+..+.+
T Consensus 286 -----------------------------------~~~~~~~~i~~vgrl~~~KG~~~Ll~a~~~~~~------------ 318 (477)
T d1rzua_ 286 -----------------------------------IDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVS------------ 318 (477)
T ss_dssp -----------------------------------CCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHH------------
T ss_pred -----------------------------------cccCCccEEEEEeeeeecCCcHHHHHHHHHHHh------------
Confidence 223333489999999999999999999999876
Q ss_pred hhhHhHhhhcCCccccCCCEEEEEEeCCCChHHH--HHHHHHcCCCcEEEecCCCCcccHHHHHhcccEEEeeccCCCCC
Q 011969 299 NEEVFLKEISDGKQYLYPRLLFIITGKGPDKESY--EEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGL 376 (474)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~~--~~~~~~l~l~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e 376 (474)
.+.+++++|.|+..... ++....++ ++|.|.+. .+.++...+++.||++|+ ||..|
T Consensus 319 -----------------~~~~l~~~G~G~~~~~~~~~~~~~~~~-~~v~~~~~-~~~~~~~~~~~~aD~~v~---PS~~E 376 (477)
T d1rzua_ 319 -----------------LGGRLVVLGAGDVALEGALLAAASRHH-GRVGVAIG-YNEPLSHLMQAGCDAIII---PSRFE 376 (477)
T ss_dssp -----------------TTCEEEEEECBCHHHHHHHHHHHHHTT-TTEEEEES-CCHHHHHHHHHHCSEEEE---CCSCC
T ss_pred -----------------hCCeEEEEecCCchHHHHHHHHHhhcC-CeEEEEcc-cChhHHHHHHHhCccccC---Ccccc
Confidence 36788889988765433 33333333 68999988 788899999999999999 68889
Q ss_pred CCchHHHHHHhcCCcEEEecccccccccccCC---------cEEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Q 011969 377 DLPMKVVDMFGCGLPVCAVSYSCIEELVKVDK---------NGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTL 445 (474)
Q Consensus 377 ~~p~kv~Eama~G~PVia~~~~~~~e~v~~~~---------~G~l~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~ 445 (474)
+||++++||||||+|||+|+.||++|+|.++. +|++++ |+++|+++|.++++.+. |++.+++|++++.
T Consensus 377 ~fglv~lEAma~G~PvVas~~GG~~E~v~d~~~~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~-~~~~~~~~~~~a~ 455 (477)
T d1rzua_ 377 PCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYH-DPKLWTQMQKLGM 455 (477)
T ss_dssp SSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHHT-CHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHcCCCEEEcCCCCCcceeecCCccccccCCCceEEeCCCCHHHHHHHHHHHHhhhC-CHHHHHHHHHHHH
Confidence 99999999999999999999999999998764 899996 79999999998876322 6899999999986
Q ss_pred HhccccchHHHHHHHHHHHHHHHh
Q 011969 446 EMGLSARWATEWEEHAKPLITEVI 469 (474)
Q Consensus 446 ~~~~~~~w~~~~~~~~~~~~~~~~ 469 (474)
+ ++++|+...+++ ..++++++
T Consensus 456 ~--~~fsw~~~a~~~-~~lY~~ll 476 (477)
T d1rzua_ 456 K--SDVSWEKSAGLY-AALYSQLI 476 (477)
T ss_dssp T--CCCBHHHHHHHH-HHHHHHHT
T ss_pred H--hhCCHHHHHHHH-HHHHHHHh
Confidence 4 479999887664 44666664
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.89 E-value=1.8e-22 Score=186.25 Aligned_cols=157 Identities=20% Similarity=0.267 Sum_probs=127.7
Q ss_pred EEEEEeecc-cCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCCh-HHHHHHHHH
Q 011969 261 LVVSSTSWT-PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK-ESYEEKIRR 338 (474)
Q Consensus 261 ~i~~~G~l~-~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~-~~~~~~~~~ 338 (474)
.++|+|++. ++||++.+++|++.+.++ ...++++|+|+|.|+.. +.+.+.+++
T Consensus 34 ~il~~Grl~~~~Kg~~~li~a~~~l~~~-------------------------~~~~~~~l~i~G~g~~~~~~~~~~~~~ 88 (196)
T d2bfwa1 34 TFMFIGRFDRGQKGVDVLLKAIEILSSK-------------------------KEFQEMRFIIIGKGDPELEGWARSLEE 88 (196)
T ss_dssp EEEEESCBCSSSSCHHHHHHHHHHHTTS-------------------------GGGGGEEEEEECCBCHHHHHHHHHHHH
T ss_pred EEEEEcCCCccccCHHHHHHHHHhhhcc-------------------------cCCCCeEEEEEeecccchhhhhhhhhh
Confidence 789999997 589999999999988541 12478999999988643 222222222
Q ss_pred cCCCcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecccccccccccCCcEEEeC--CH
Q 011969 339 LRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFS--SS 416 (474)
Q Consensus 339 l~l~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~~~~e~v~~~~~G~l~~--~~ 416 (474)
. ..++.+.+++++.+++..+|+.||++|+ |+..|++|.+++|||+||+|||+++.+++.|++.+ .+|++++ |+
T Consensus 89 ~-~~~~~~~~~~~~~~~l~~~~~~~di~v~---ps~~e~~~~~~~Eam~~G~pvI~~~~~~~~e~i~~-~~g~~~~~~~~ 163 (196)
T d2bfwa1 89 K-HGNVKVITEMLSREFVRELYGSVDFVII---PSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITN-ETGILVKAGDP 163 (196)
T ss_dssp H-CTTEEEECSCCCHHHHHHHHTTCSEEEE---CCSCCSSCHHHHHHHHTTCEEEEESCHHHHHHCCT-TTCEEECTTCH
T ss_pred c-cceeEEeeeccccccchhcccccccccc---ccccccccccchhhhhcCceeeecCCCccceeecC-CceeeECCCCH
Confidence 2 3345555555999999999999999999 67889999999999999999999999999998854 6899986 79
Q ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccc
Q 011969 417 SELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLS 450 (474)
Q Consensus 417 ~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~ 450 (474)
++++++|.++++. +++.++++++++++.+.+
T Consensus 164 ~~l~~~i~~~l~~---~~~~~~~~~~~a~~~a~~ 194 (196)
T d2bfwa1 164 GELANAILKALEL---SRSDLSKFRENCKKRAMS 194 (196)
T ss_dssp HHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHh
Confidence 9999999999885 688999999999986543
|
| >d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: First mannosyl transferase WbaZ species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.88 E-value=2.8e-22 Score=180.40 Aligned_cols=152 Identities=21% Similarity=0.230 Sum_probs=126.3
Q ss_pred CCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCCh---HHH
Q 011969 256 PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK---ESY 332 (474)
Q Consensus 256 ~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~---~~~ 332 (474)
...+ .++|+|++.+.||++.+++|++.+ ++.+++|+|.+++. +.+
T Consensus 10 ~~~~-~~l~iGrl~~~K~~~~~i~a~~~l-------------------------------~~~~l~ivg~~~~~~~~~~~ 57 (166)
T d2f9fa1 10 CYGD-FWLSVNRIYPEKRIELQLEVFKKL-------------------------------QDEKLYIVGWFSKGDHAERY 57 (166)
T ss_dssp CCCS-CEEEECCSSGGGTHHHHHHHHHHC-------------------------------TTSCEEEEBCCCTTSTHHHH
T ss_pred CCCC-EEEEEecCccccCHHHHHHHHHHh-------------------------------cCCeEEEEEecccccchhhh
Confidence 3344 477999999999999999999875 56788999977654 344
Q ss_pred HHHHHHcCCCcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecccccccccccCCcEEE
Q 011969 333 EEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLL 412 (474)
Q Consensus 333 ~~~~~~l~l~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~~~~e~v~~~~~G~l 412 (474)
.+.+++...++|.|+|. ++.+++..+|+.||++++ ||..|++|++++|||+||+|||+++.++..|++.++.+|++
T Consensus 58 ~~~~~~~~~~~v~~~g~-~~~~~~~~~~~~ad~~i~---ps~~e~~~~~~~Ea~~~g~pvi~s~~~~~~e~i~~~~~g~~ 133 (166)
T d2f9fa1 58 ARKIMKIAPDNVKFLGS-VSEEELIDLYSRCKGLLC---TAKDEDFGLTPIEAMASGKPVIAVNEGGFKETVINEKTGYL 133 (166)
T ss_dssp HHHHHHHSCTTEEEEES-CCHHHHHHHHHHCSEEEE---CCSSCCSCHHHHHHHHTTCCEEEESSHHHHHHCCBTTTEEE
T ss_pred hhhhcccccCcEEEeec-cccccccccccccccccc---ccccccccccccccccccccceeecCCcceeeecCCccccc
Confidence 44455555579999987 999999999999999999 68889999999999999999999999999999999999999
Q ss_pred eC-CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Q 011969 413 FS-SSSELADQLLMLFKGFPDDSDVLKKLRNGTLE 446 (474)
Q Consensus 413 ~~-~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~ 446 (474)
++ |+++++++|..+++++ ...++.++++|++
T Consensus 134 ~~~d~~~~~~~i~~l~~~~---~~~~~~~~~~a~~ 165 (166)
T d2f9fa1 134 VNADVNEIIDAMKKVSKNP---DKFKKDCFRRAKE 165 (166)
T ss_dssp ECSCHHHHHHHHHHHHHCT---TTTHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHhCH---HHHHHHHHHHHhC
Confidence 86 7999999999999962 2334445555543
|
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Probab=99.81 E-value=8.6e-19 Score=182.53 Aligned_cols=176 Identities=8% Similarity=0.062 Sum_probs=137.0
Q ss_pred eEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCCh---------H
Q 011969 260 ALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK---------E 330 (474)
Q Consensus 260 ~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~---------~ 330 (474)
.+++++||+.+.||++.+++|+..+.++ .+....++.++.+|.++.. .
T Consensus 255 ~~il~V~Rld~~KGi~~~l~A~~~~l~~-----------------------~p~~~~~v~lv~~~~~~~~~~~~~~~~~~ 311 (456)
T d1uqta_ 255 QNIFSVERLDYSKGLPERFLAYEALLEK-----------------------YPQHHGKIRYTQIAPTSRGDVQAYQDIRH 311 (456)
T ss_dssp EEEEEECCBCGGGCHHHHHHHHHHHHHH-----------------------CGGGTTTEEEEEECCBCSTTSHHHHHHHH
T ss_pred eEEEEeCCCchhhchHHHHHHHHHHHHh-----------------------CccccccEEEEEEcCCcccchHHHHHHHH
Confidence 3899999999999999999999998774 0101235778888866432 1
Q ss_pred HHHHHHHHc-------CC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCc-----EEEecc
Q 011969 331 SYEEKIRRL-------RL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLP-----VCAVSY 397 (474)
Q Consensus 331 ~~~~~~~~l-------~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~P-----Via~~~ 397 (474)
++.+.+.++ ++ +.+.+.+. ++.+++..+|+.||++++ +|..||||++++||||||+| ||+|+.
T Consensus 312 ev~~lv~~in~~~~~~~~~~~v~~~~~-~~~~~l~a~~~~Adv~v~---~s~~EG~~lv~~Ea~a~~~p~~~g~lIlS~~ 387 (456)
T d1uqta_ 312 QLENEAGRINGKYGQLGWTPLYYLNQH-FDRKLLMKIFRYSDVGLV---TPLRDGMNLVAKEYVAAQDPANPGVLVLSQF 387 (456)
T ss_dssp HHHHHHHHHHHHHCBTTBCSEEEECSC-CCHHHHHHHHHHCSEEEE---CCSSBSCCHHHHHHHHHSCTTSCCEEEEETT
T ss_pred HHHHHHHHHHhhhccCCCCceeeccCC-cCHHHHhHHHhhhceeec---CCccCCCCcHHHHHHHhCCCCCCCcEEEeCC
Confidence 222233222 34 56778777 999999999999999999 79999999999999999999 999999
Q ss_pred cccccccccCCcEEEeC--CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHh
Q 011969 398 SCIEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEVI 469 (474)
Q Consensus 398 ~~~~e~v~~~~~G~l~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 469 (474)
+|..+.+. .|++++ |++++|++|.++++. ++++++++.+++++...++++.. |-+....-++++.
T Consensus 388 ~G~~~~l~---~g~lVnP~d~~~~A~ai~~aL~~---~~~er~~~~~~~~~~v~~~~~~~-W~~~fl~~l~~~~ 454 (456)
T d1uqta_ 388 AGAANELT---SALIVNPYDRDEVAAALDRALTM---SLAERISRHAEMLDVIVKNDINH-WQECFISDLKQIV 454 (456)
T ss_dssp BGGGGTCT---TSEEECTTCHHHHHHHHHHHHTC---CHHHHHHHHHHHHHHHHHTCHHH-HHHHHHHHHHHSC
T ss_pred CCCHHHhC---CeEEECcCCHHHHHHHHHHHHcC---CHHHHHHHHHHHHHHHHHCCHHH-HHHHHHHHHHhhc
Confidence 99999884 378886 899999999999986 57888888888888877777653 7554444444443
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=99.32 E-value=1.5e-10 Score=112.34 Aligned_cols=118 Identities=15% Similarity=0.201 Sum_probs=79.0
Q ss_pred EEEEEEeCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecc
Q 011969 318 LLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY 397 (474)
Q Consensus 318 ~~l~ivG~g~~~~~~~~~~~~l~l~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~ 397 (474)
...+.+|..................++...++ .+++..++..||++|+ ..| +..+.|+++||+|+|....
T Consensus 207 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~f---~~~~~~lm~~adl~It----~~G---~~T~~Eal~~g~P~I~iP~ 276 (351)
T d1f0ka_ 207 VTIWHQSGKGSQQSVEQAYAEAGQPQHKVTEF---IDDMAAAYAWADVVVC----RSG---ALTVSEIAAAGLPALFVPF 276 (351)
T ss_dssp EEEEEECCTTCHHHHHHHHHHTTCTTSEEESC---CSCHHHHHHHCSEEEE----CCC---HHHHHHHHHHTCCEEECCC
T ss_pred ceeeeeccccchhhhhhhhcccccccceeeee---hhhHHHHHHhCchhhc----ccc---chHHHHHHHhCCceeeeec
Confidence 34455554444333333333333357777777 5889999999999997 233 3589999999999998753
Q ss_pred c-------ccccccccCCcEEEeC----CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhcccc
Q 011969 398 S-------CIEELVKVDKNGLLFS----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSA 451 (474)
Q Consensus 398 ~-------~~~e~v~~~~~G~l~~----~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (474)
. ..++.+++.+.|+..+ +.+.+.++|..+ +++.+.+|++++++.....
T Consensus 277 ~~~~~~Q~~NA~~l~~~G~~~~~~~~~~~~e~l~~~l~~l------~~~~~~~~~~~~~~~~~~~ 335 (351)
T d1f0ka_ 277 QHKDRQQYWNALPLEKAGAAKIIEQPQLSVDAVANTLAGW------SRETLLTMAERARAASIPD 335 (351)
T ss_dssp CCTTCHHHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHTC------CHHHHHHHHHHHHHTCCTT
T ss_pred ccCCchHHHHHHHHHHCCCEEEechhhCCHHHHHHHHHhh------CHHHHHHHHHHHHccCCcc
Confidence 2 2245677778888875 356666666554 3677889999999865343
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=98.98 E-value=1.4e-08 Score=99.08 Aligned_cols=76 Identities=12% Similarity=0.079 Sum_probs=59.6
Q ss_pred CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecccc--------cccccccCCcEEEe
Q 011969 342 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC--------IEELVKVDKNGLLF 413 (474)
Q Consensus 342 ~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~~--------~~e~v~~~~~G~l~ 413 (474)
++|.+.+. +|. ..++..+|++|.. .| .+++.|||++|+|+|+....+ ..+.+.+.+.|+..
T Consensus 270 ~~v~i~~~-~p~---~~ll~~a~~~v~h----gG---~~t~~Eal~~G~P~v~~P~~~d~~~eQ~~nA~~l~~~G~g~~l 338 (391)
T d1pn3a_ 270 ADCFVVGE-VNL---QELFGRVAAAIHH----DS---AGTTLLAMRAGIPQIVVRRVVDNVVEQAYHADRVAELGVGVAV 338 (391)
T ss_dssp TTCCEESS-CCH---HHHHTTSSCEEEE----SC---HHHHHHHHHHTCCEEEECSSCCBTTBCCHHHHHHHHHTSEEEE
T ss_pred CCEEEecc-cCH---HHHHhhccEEEec----Cc---hHHHHHHHHhCCcEEEeccccCCcchHHHHHHHHHHCCCEEEc
Confidence 68988875 764 5568899999972 22 358999999999999987432 35567777889888
Q ss_pred C----CHHHHHHHHHHHHh
Q 011969 414 S----SSSELADQLLMLFK 428 (474)
Q Consensus 414 ~----~~~~la~~i~~l~~ 428 (474)
+ ++++|+++|.++++
T Consensus 339 ~~~~~~~~~l~~~i~~~l~ 357 (391)
T d1pn3a_ 339 DGPVPTIDSLSAALDTALA 357 (391)
T ss_dssp CCSSCCHHHHHHHHHHHTS
T ss_pred CcCCCCHHHHHHHHHHHhC
Confidence 4 48999999999986
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Probab=98.92 E-value=1.2e-07 Score=92.59 Aligned_cols=76 Identities=11% Similarity=0.039 Sum_probs=60.3
Q ss_pred CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecccc----cccccccCCcEEEeC---
Q 011969 342 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVDKNGLLFS--- 414 (474)
Q Consensus 342 ~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~~----~~e~v~~~~~G~l~~--- 414 (474)
+||.+.+. +|. ..++.++|++|. ++ -.+++.||+++|+|+|+....+ ..+.++..+.|+..+
T Consensus 286 ~~v~~~~~-~p~---~~ll~~~~~~I~-----hg--G~~t~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~G~g~~l~~~~ 354 (401)
T d1rrva_ 286 DDCFAIDE-VNF---QALFRRVAAVIH-----HG--SAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPT 354 (401)
T ss_dssp TTEEEESS-CCH---HHHGGGSSEEEE-----CC--CHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEECSSSC
T ss_pred CCEEEEec-cCc---HHHhhhccEEEe-----cC--CchHHHHHHHhCCCEEEecccccHHHHHHHHHHCCCEEEcCcCC
Confidence 68999875 764 566889999997 22 2469999999999999987544 456677778898885
Q ss_pred -CHHHHHHHHHHHHh
Q 011969 415 -SSSELADQLLMLFK 428 (474)
Q Consensus 415 -~~~~la~~i~~l~~ 428 (474)
++++|+++|.++++
T Consensus 355 ~~~~~L~~ai~~vl~ 369 (401)
T d1rrva_ 355 PTFESLSAALTTVLA 369 (401)
T ss_dssp CCHHHHHHHHHHHTS
T ss_pred CCHHHHHHHHHHHhC
Confidence 58999999999985
|
| >d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Thermus thermophilus [TaxId: 274]
Probab=98.84 E-value=1.6e-07 Score=93.85 Aligned_cols=248 Identities=17% Similarity=0.125 Sum_probs=153.9
Q ss_pred CCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCchH-HHHHHHHHHHHhhhcCEEEEeCHHHH
Q 011969 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHF-VSIYRWIEKYYGKMANGCLCVTQAMQ 178 (474)
Q Consensus 100 ~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~ad~vi~vS~~~~ 178 (474)
.+||+|+++.-. ..+ +++.+++...++| |+++|+-.. +.....++ .- .......+.||..+|.++..+
T Consensus 87 ~kPD~vlv~GDr-~e~-la~a~aa~~~~ip-i~HiegG~r-----sg~~~~~~~de---~~R~~iskls~~hf~~t~~~~ 155 (373)
T d1v4va_ 87 MGADYVLVHGDT-LTT-FAVAWAAFLEGIP-VGHVEAGLR-----SGNLKEPFPEE---ANRRLTDVLTDLDFAPTPLAK 155 (373)
T ss_dssp TTCSEEEEESSC-HHH-HHHHHHHHHTTCC-EEEETCCCC-----CSCTTSSTTHH---HHHHHHHHHCSEEEESSHHHH
T ss_pred cCcccccccccC-ccc-hhHHHHHHHhhhh-heeeccccc-----ccccccCcchh---hhhhhhccccceeeecchhhh
Confidence 799999998743 233 3566778888999 555665311 00111111 11 233345578999999999999
Q ss_pred HHHHHHhCCceEEEeC-CCCCCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhcccccccccCCC
Q 011969 179 HELAQNWGIKATVLYD-QPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKPN 257 (474)
Q Consensus 179 ~~l~~~~~~~~~vi~n-~~~~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (474)
+.+.+. |.+-..+.+ |.+ .. +.......+.. .....+.
T Consensus 156 ~~L~~~-Ge~~~~I~~vG~p------~~-D~i~~~~~~~~---------------------------------~~~~~~~ 194 (373)
T d1v4va_ 156 ANLLKE-GKREEGILVTGQT------GV-DAVLLAAKLGR---------------------------------LPEGLPE 194 (373)
T ss_dssp HHHHTT-TCCGGGEEECCCH------HH-HHHHHHHHHCC---------------------------------CCTTCCS
T ss_pred hhhhhh-cccccceeecccc------hh-hHHHhhhhhcc---------------------------------ccccccc
Confidence 999884 665322222 322 00 10000111110 0011233
Q ss_pred CCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCChHHHHHH-H
Q 011969 258 RPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEK-I 336 (474)
Q Consensus 258 ~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~-~ 336 (474)
.+++++..-+-...+....+.+++..+.+. .+++.+++..... ...... .
T Consensus 195 ~~~~lvt~hr~~n~~~~~~~~~~~~~~~~~---------------------------~~~~~~i~p~~~~--~~~~~~~~ 245 (373)
T d1v4va_ 195 GPYVTVTMHRRENWPLLSDLAQALKRVAEA---------------------------FPHLTFVYPVHLN--PVVREAVF 245 (373)
T ss_dssp SCEEEECCCCGGGGGGHHHHHHHHHHHHHH---------------------------CTTSEEEEECCSC--HHHHHHHH
T ss_pred ccceeEEeccccccchHHHHHHHHHHHhhh---------------------------cccceeeeeeccc--ccchhhhh
Confidence 455666666666556667777777777663 5566666554322 222222 2
Q ss_pred HHcCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEe-cccccccccccCCcEEEe-
Q 011969 337 RRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV-SYSCIEELVKVDKNGLLF- 413 (474)
Q Consensus 337 ~~l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~-~~~~~~e~v~~~~~G~l~- 413 (474)
+.+.. +++.+... ++..++..+++.|++++- .|.+ -+.||.++|+|+|.. +.+.-.+-++.+.+ +++
T Consensus 246 ~~~~~~~n~~~~~~-l~~~~~l~ll~~s~~vig---nSss-----gi~Ea~~lg~P~Inir~~~eRqeg~~~g~n-vlv~ 315 (373)
T d1v4va_ 246 PVLKGVRNFVLLDP-LEYGSMAALMRASLLLVT---DSGG-----LQEEGAALGVPVVVLRNVTERPEGLKAGIL-KLAG 315 (373)
T ss_dssp HHHTTCTTEEEECC-CCHHHHHHHHHTEEEEEE---SCHH-----HHHHHHHTTCCEEECSSSCSCHHHHHHTSE-EECC
T ss_pred hhhcccccceeecc-chHHHHHHHhhhceeEec---ccch-----hhhcchhhcCcEEEeCCCccCHHHHhcCee-EEcC
Confidence 23333 68999988 999999999999999986 4444 678999999999998 45777777766655 445
Q ss_pred CCHHHHHHHHHHHHhCCCCCHHHHHHHHH
Q 011969 414 SSSSELADQLLMLFKGFPDDSDVLKKLRN 442 (474)
Q Consensus 414 ~~~~~la~~i~~l~~~~~~~~~~~~~~~~ 442 (474)
.|.+++.+++..++++ ++.++++.+
T Consensus 316 ~d~~~I~~~i~~~l~~----~~~~~~~~~ 340 (373)
T d1v4va_ 316 TDPEGVYRVVKGLLEN----PEELSRMRK 340 (373)
T ss_dssp SCHHHHHHHHHHHHTC----HHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcC----HHHHhhccc
Confidence 4899999999999885 665555544
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=98.62 E-value=1.5e-06 Score=84.01 Aligned_cols=76 Identities=12% Similarity=0.030 Sum_probs=59.7
Q ss_pred CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecccc----cccccccCCcEEEeC---
Q 011969 342 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVDKNGLLFS--- 414 (474)
Q Consensus 342 ~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~~----~~e~v~~~~~G~l~~--- 414 (474)
+||.+.+. +|. ..+|.++|++|+ ++ -.+++.||+++|+|+|+....+ ..+.+.+.+.|...+
T Consensus 285 ~nv~~~~~-~p~---~~~l~~~~~~V~-----hg--G~~t~~Eal~~GvP~v~~P~~~DQ~~na~~l~~~G~g~~l~~~~ 353 (401)
T d1iira_ 285 ADCFAIGE-VNH---QVLFGRVAAVIH-----HG--GAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHDGPI 353 (401)
T ss_dssp GGEEECSS-CCH---HHHGGGSSEEEE-----CC--CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSS
T ss_pred CCEEEEec-cCH---HHHHhhcCEEEe-----cC--CchHHHHHHHhCCCEEEccccccHHHHHHHHHHCCCEEEcCcCC
Confidence 58999875 654 567899999997 22 3569999999999999975433 455666778898874
Q ss_pred -CHHHHHHHHHHHHh
Q 011969 415 -SSSELADQLLMLFK 428 (474)
Q Consensus 415 -~~~~la~~i~~l~~ 428 (474)
++++|+++|.++++
T Consensus 354 ~~~~~l~~ai~~~l~ 368 (401)
T d1iira_ 354 PTFDSLSAALATALT 368 (401)
T ss_dssp CCHHHHHHHHHHHTS
T ss_pred CCHHHHHHHHHHHhC
Confidence 59999999999986
|
| >d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Bacillus subtilis [TaxId: 1423]
Probab=98.56 E-value=1.1e-05 Score=80.19 Aligned_cols=250 Identities=14% Similarity=0.085 Sum_probs=135.8
Q ss_pred CCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCCCchH-HHHHHHHHHHHhhhcCEEEEeCHHHH
Q 011969 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHF-VSIYRWIEKYYGKMANGCLCVTQAMQ 178 (474)
Q Consensus 100 ~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~ad~vi~vS~~~~ 178 (474)
.+||+|++++-.+ ..+++..++...++|+ +++|+-.. +.....++ -- .......+.||..+|.++..+
T Consensus 87 ~kpD~v~v~GDr~--e~la~a~aa~~~~Ipi-~HiegG~~-----s~~~~~~~~de---~~R~~iskls~~hf~~t~~~~ 155 (377)
T d1o6ca_ 87 IKPDIVLVHGDTT--TTFAGSLAAFYHQIAV-GHVEAGLR-----TGNKYSPFPEE---LNRQMTGAIADLHFAPTGQAK 155 (377)
T ss_dssp HCCSEEEEETTCH--HHHHHHHHHHHTTCEE-EEESCCCC-----CSCTTTTTTHH---HHHHHHHHHCSEEEESSHHHH
T ss_pred cccceeEeeeccc--ccchhhhhhhhccceE-EEEecccc-----cccccccCchh---hhccccccceeEEeecchhhh
Confidence 7899999987532 3345677788899995 56665421 11111111 11 223455678999999999999
Q ss_pred HHHHHHhCCceE-EEeCCCCCCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhcccccccccCCC
Q 011969 179 HELAQNWGIKAT-VLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKPN 257 (474)
Q Consensus 179 ~~l~~~~~~~~~-vi~n~~~~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (474)
+.|.+. |.+.. +...|.+ .-+.+...... .. . .........
T Consensus 156 ~~L~~~-G~~~~~I~~vG~~---------~~D~i~~~~~~---------------------~~----~---~~~~~~~~~ 197 (377)
T d1o6ca_ 156 DNLLKE-NKKADSIFVTGNT---------AIDALNTTVRD---------------------GY----S---HPVLDQVGE 197 (377)
T ss_dssp HHHHHT-TCCGGGEEECCCH---------HHHHHHHHCCS---------------------SC----C---CSTTTTTTT
T ss_pred hhhhhh-ccccceEeeccch---------hHHHHHHHHHH---------------------HH----h---hhhhhhccC
Confidence 999885 66532 3333322 00111110000 00 0 000011123
Q ss_pred CCeEEEEEeecccC-CCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCChHHHHHHH
Q 011969 258 RPALVVSSTSWTPD-EDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKI 336 (474)
Q Consensus 258 ~~~~i~~~G~l~~~-k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~ 336 (474)
.+++++..-+.+.. +.....+.++..+... .++..+++...... ......
T Consensus 198 ~~~ilvt~Hr~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~i~~~~~~~--~~~~~~ 248 (377)
T d1o6ca_ 198 DKMILLTAHRRENLGEPMENMFKAIRRIVGE---------------------------FEDVQVVYPVHLNP--VVREAA 248 (377)
T ss_dssp SEEEEECC----------HHHHHHHHHHHHH---------------------------CTTEEEEEC----C--HHHHHH
T ss_pred CceEEEEeccccccccchHHHHHHHHhhccc---------------------------cccccccccccccc--ccchhh
Confidence 33344444333322 2223333444333331 35566655543322 233333
Q ss_pred HH-cCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEec-ccccccccccCCcEEEe
Q 011969 337 RR-LRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS-YSCIEELVKVDKNGLLF 413 (474)
Q Consensus 337 ~~-l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~-~~~~~e~v~~~~~G~l~ 413 (474)
.+ +.. ++|.+... +++.++..+++.|++++- .|.+ -+.||-.+|+|+|... .+.-.+.++.+.+=++.
T Consensus 249 ~~~~~~~~ni~~~~~-l~~~~fl~llk~s~~vIg---nSss-----~i~Ea~~lg~P~Inir~~tERqe~~~~g~nilv~ 319 (377)
T d1o6ca_ 249 HKHFGDSDRVHLIEP-LEVIDFHNFAAKSHFILT---DSGG-----VQEEAPSLGKPVLVLRDTTERPEGVEAGTLKLAG 319 (377)
T ss_dssp HHC--CCSSEEECCC-CCHHHHHHHHHHCSEEEE---C--C-----HHHHGGGGTCCEEEECSCCC---CTTTTSSEEEC
T ss_pred hhccccccceEeccc-cchHHHHHHHhhhheeec---ccch-----hHHhhhhhhceEEEeCCCCcCcchhhcCeeEECC
Confidence 33 223 68999988 999999999999999886 5555 5899999999999885 35566766666554433
Q ss_pred CCHHHHHHHHHHHHhCCCCCHHHHHHH
Q 011969 414 SSSSELADQLLMLFKGFPDDSDVLKKL 440 (474)
Q Consensus 414 ~~~~~la~~i~~l~~~~~~~~~~~~~~ 440 (474)
.+.+++.+++..++.+ +...+.+
T Consensus 320 ~~~~~I~~~i~~~l~~----~~~~~~~ 342 (377)
T d1o6ca_ 320 TDEENIYQLAKQLLTD----PDEYKKM 342 (377)
T ss_dssp SCHHHHHHHHHHHHHC----HHHHHHH
T ss_pred CCHHHHHHHHHHHHhC----hHHHhhh
Confidence 4899999999999885 5544443
|
| >d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Escherichia coli [TaxId: 562]
Probab=98.40 E-value=1.8e-05 Score=78.61 Aligned_cols=251 Identities=15% Similarity=0.099 Sum_probs=142.6
Q ss_pred CCCCEEEEeCCCChhHHHHHHHHHhhCCCcEEEEecCchhhhhhhccCC-CchHHHHHHHHHHHHhhhcCEEEEeCHHHH
Q 011969 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGR-RSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178 (474)
Q Consensus 100 ~~~Dvi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~-~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~ 178 (474)
.+||+|+++.-. .. .+++.+++...++| |.++|+-.. +.+. .....- .......+.||..+|.++..+
T Consensus 85 ~kPD~v~v~GDr-~e-~la~a~aa~~~~ip-i~HiegG~~-----s~~~~~~~pde---~~R~~iskls~~hf~~~~~~~ 153 (376)
T d1f6da_ 85 FKPDVVLVHGDT-TT-TLATSLAAFYQRIP-VGHVEAGLR-----TGDLYSPWPEE---ANRTLTGHLAMYHFSPTETSR 153 (376)
T ss_dssp HCCSEEEEETTC-HH-HHHHHHHHHTTTCC-EEEESCCCC-----CSCTTSSTTHH---HHHHHHHHTCSEEEESSHHHH
T ss_pred ccCcceeeeccc-cc-hhhHHHHHHhhCce-EEEEecccc-----cccccccCchh---hhhhhhccceeEEEeccHHHH
Confidence 789999998753 33 33566777888999 566776421 0111 011111 233455678999999999999
Q ss_pred HHHHHHhCCceEEEeC-CCCCCCCCCChHHHHHHHHhhhhccCCCCCccccccccccCCcCcchhhhhc-ccccccccCC
Q 011969 179 HELAQNWGIKATVLYD-QPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTS-LAGIDVFLKP 256 (474)
Q Consensus 179 ~~l~~~~~~~~~vi~n-~~~~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 256 (474)
+.+.+. |.....+++ |.+. .+.-........ ....+.. ..........
T Consensus 154 ~~L~~~-G~~~~~I~~vG~~~------~D~l~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~ 203 (376)
T d1f6da_ 154 QNLLRE-NVADSRIFITGNTV------IDALLWVRDQVM-----------------------SSDKLRSELAANYPFIDP 203 (376)
T ss_dssp HHHHHT-TCCGGGEEECCCHH------HHHHHHHHHHTT-----------------------TCHHHHHHHHTTCTTCCT
T ss_pred hHHHhc-CCCccccceecCch------HHHHHHHHhhhh-----------------------ccchhhhhhhccccccCC
Confidence 999885 665332222 3220 000000000000 0000000 0000001223
Q ss_pred CCCeEEEEEeecc-cCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCChHHHHHH
Q 011969 257 NRPALVVSSTSWT-PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEK 335 (474)
Q Consensus 257 ~~~~~i~~~G~l~-~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~ 335 (474)
+.+++++..-+.+ ..+....++.++..+.+. ..++.+++.... ....-...
T Consensus 204 ~~~~ilvt~H~~~~~~~~~~~i~~~l~~~~~~---------------------------~~~~~ii~p~~~-~~~~~~~~ 255 (376)
T d1f6da_ 204 DKKMILVTGHRRESFGRGFEEICHALADIATT---------------------------HQDIQIVYPVHL-NPNVREPV 255 (376)
T ss_dssp TSEEEEECCCCBSSCCHHHHHHHHHHHHHHHH---------------------------CTTEEEEEECCB-CHHHHHHH
T ss_pred CCceEEEecccchhhhhhHHHHHHHHhhhhhh---------------------------cceeEEeccccc-chhhhhhH
Confidence 4454554433332 233445566666666552 456666665432 22211222
Q ss_pred HHHcCC-CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEec-ccccccccccCCcEEEe
Q 011969 336 IRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS-YSCIEELVKVDKNGLLF 413 (474)
Q Consensus 336 ~~~l~l-~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~-~~~~~e~v~~~~~G~l~ 413 (474)
.+.+.. +++.+... +++.++..+++.|++++- .|++ -+.||-.+|+|+|... .+.-.+-+..+ +-+++
T Consensus 256 ~~~~~~~~ni~~~~~-l~~~~fl~ll~~a~~vig---nSss-----gi~Ea~~lg~P~Inir~~ter~~~~~~g-~~i~v 325 (376)
T d1f6da_ 256 NRILGHVKNVILIDP-QEYLPFVWLMNHAWLILT---DSGG-----IQEEAPSLGKPVLVMRDTTERPEAVTAG-TVRLV 325 (376)
T ss_dssp HHHHTTCTTEEEECC-CCHHHHHHHHHHCSEEEE---SSSG-----GGGTGGGGTCCEEECSSCCSCHHHHHHT-SEEEC
T ss_pred hhhhcccccceeecc-ccHHHHHHHHhhceEEEe---cCcc-----hHhhHHHhCCCEEEcCCCccCccceecC-eeEEC
Confidence 222333 79999988 999999999999999997 5544 4689999999999763 34455666554 44555
Q ss_pred C-CHHHHHHHHHHHHhC
Q 011969 414 S-SSSELADQLLMLFKG 429 (474)
Q Consensus 414 ~-~~~~la~~i~~l~~~ 429 (474)
+ +.+++.+++.+++++
T Consensus 326 ~~~~~~I~~ai~~~l~~ 342 (376)
T d1f6da_ 326 GTDKQRIVEEVTRLLKD 342 (376)
T ss_dssp CSSHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHhC
Confidence 4 799999999999884
|
| >d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Triterpene UDP-glucosyl transferase UGT71G1 species: Medicago truncatula [TaxId: 3880]
Probab=98.40 E-value=0.00019 Score=70.20 Aligned_cols=79 Identities=14% Similarity=0.031 Sum_probs=55.5
Q ss_pred CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecc----cccccc-cccCCcEEEeC--
Q 011969 342 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY----SCIEEL-VKVDKNGLLFS-- 414 (474)
Q Consensus 342 ~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~----~~~~e~-v~~~~~G~l~~-- 414 (474)
+++.+.. |.+..++. ....+|++|. +| =-+.+.||+.+|+|+|+... .....- ++..+.|+...
T Consensus 330 ~n~~v~~-~~pq~~~l-~~p~~~~fIt-----HG--G~gs~~eAl~~GVP~l~~P~~~DQ~~nA~rlve~~G~G~~l~~~ 400 (461)
T d2acva1 330 GKGMICG-WAPQVEVL-AHKAIGGFVS-----HC--GWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVD 400 (461)
T ss_dssp CSEEEES-SCCHHHHH-HSTTEEEEEE-----CC--CHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCSS
T ss_pred CCeEEEe-cCCHHHHH-hcccCCEEEe-----cC--CccHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceEEeecc
Confidence 3666664 35555443 4678889886 22 13489999999999999753 333333 46667888763
Q ss_pred --------CHHHHHHHHHHHHhC
Q 011969 415 --------SSSELADQLLMLFKG 429 (474)
Q Consensus 415 --------~~~~la~~i~~l~~~ 429 (474)
+.+++++++.+++.+
T Consensus 401 ~~~~~~~~t~~~l~~a~~~vl~~ 423 (461)
T d2acva1 401 YRKGSDVVAAEEIEKGLKDLMDK 423 (461)
T ss_dssp CCTTCCCCCHHHHHHHHHHHTCT
T ss_pred ccccCCccCHHHHHHHHHHHhhC
Confidence 478999999999964
|
| >d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: UDP glucose:flavonoid 3-o-glucosyltransferase species: Grape (Vitis vinifera) [TaxId: 29760]
Probab=98.20 E-value=0.00022 Score=70.08 Aligned_cols=91 Identities=14% Similarity=0.080 Sum_probs=61.3
Q ss_pred CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEeccc----ccccccc-cCCcEEEeC--
Q 011969 342 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS----CIEELVK-VDKNGLLFS-- 414 (474)
Q Consensus 342 ~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~~----~~~e~v~-~~~~G~l~~-- 414 (474)
+|+.+.. |+|+.++.. ...++++|. +|. .+.+.||+.+|+|+|+.... .....+. ..+.|+..+
T Consensus 319 ~nv~~~~-~~pq~~lL~-hp~~~~fIt-----HGG--~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~ 389 (450)
T d2c1xa1 319 GYGMVVP-WAPQAEVLA-HEAVGAFVT-----HCG--WNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGG 389 (450)
T ss_dssp TTEEEES-CCCHHHHHT-STTEEEEEE-----CCC--HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECGGG
T ss_pred ccccccc-cCChHhhhc-cCceeEEEc-----cCC--ccHHHHHHHcCCCEEecccccchHHHHHHHHHHcCcEEEecCC
Confidence 4787774 477665322 255677775 331 34899999999999998643 2333343 458898875
Q ss_pred --CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Q 011969 415 --SSSELADQLLMLFKGFPDDSDVLKKLRNGTLE 446 (474)
Q Consensus 415 --~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~ 446 (474)
+.+++.++|.+++++ + .+++.++++.+
T Consensus 390 ~~t~~~l~~ai~~vL~d----~-~y~~~~~r~~~ 418 (450)
T d2c1xa1 390 VFTKSGLMSCFDQILSQ----E-KGKKLRENLRA 418 (450)
T ss_dssp SCCHHHHHHHHHHHHHS----H-HHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHhcC----c-HHHHHHHHHHH
Confidence 689999999999995 3 34455555544
|
| >d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: (Iso)flavonoid glycosyltransferase species: Medicago truncatula [TaxId: 3880]
Probab=97.83 E-value=0.00095 Score=65.16 Aligned_cols=112 Identities=15% Similarity=0.198 Sum_probs=74.5
Q ss_pred CcEEEecCCCCcccHHHHH--hcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecc----ccccccc-ccCCcEEEeC
Q 011969 342 KRVAFRTMWLSAEDYPLLL--GSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY----SCIEELV-KVDKNGLLFS 414 (474)
Q Consensus 342 ~~V~f~g~~v~~~~~~~~l--~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~----~~~~e~v-~~~~~G~l~~ 414 (474)
+||.+.. |+|+.+ ++ .+++++|. +|. .+.+.||+.+|+|+|+... .....-+ +..+.|+..+
T Consensus 346 ~Nv~~~~-~~Pq~~---lL~hp~~~~fIt-----HGG--~~s~~Eal~~GVP~lv~P~~~DQ~~na~rv~~~~G~G~~l~ 414 (473)
T d2pq6a1 346 DRGLIAS-WCPQDK---VLNHPSIGGFLT-----HCG--WNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEID 414 (473)
T ss_dssp TTEEEES-CCCHHH---HHTSTTEEEEEE-----CCC--HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECC
T ss_pred CceEEee-eCCHHH---HhcCCcCcEEEe-----cCC--ccHHHHHHHcCCCEEeccchhhhHHHHHHHHHHcCeEEeeC
Confidence 5898875 577665 46 46667775 331 3489999999999999863 3333434 4457888876
Q ss_pred ---CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccccch-----HHHHHHHHHHHHHHHhh
Q 011969 415 ---SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARW-----ATEWEEHAKPLITEVIS 470 (474)
Q Consensus 415 ---~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w-----~~~~~~~~~~~~~~~~~ 470 (474)
+.++++++|.+++++ +. .+++++++.++....+= .+++ ..++.+++|++.
T Consensus 415 ~~~t~~~l~~ai~~vl~d----~~-~~~~r~~a~~l~~~~~~a~~~gg~s~-~~~~~~i~~~~~ 472 (473)
T d2pq6a1 415 TNVKREELAKLINEVIAG----DK-GKKMKQKAMELKKKAEENTRPGGCSY-MNLNKVIKDVLL 472 (473)
T ss_dssp SSCCHHHHHHHHHHHHTS----HH-HHHHHHHHHHHHHHHHHHTSTTCHHH-HHHHHHHHHTTC
T ss_pred CCcCHHHHHHHHHHHHcC----Ch-HHHHHHHHHHHHHHHHHHHhCCCCHH-HHHHHHHHHHhc
Confidence 699999999999995 43 45677787775532211 0223 236667777653
|
| >d1pswa_ c.87.1.7 (A:) ADP-heptose LPS heptosyltransferase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: ADP-heptose LPS heptosyltransferase II domain: ADP-heptose LPS heptosyltransferase II species: Escherichia coli [TaxId: 562]
Probab=97.36 E-value=0.0013 Score=62.50 Aligned_cols=104 Identities=15% Similarity=0.142 Sum_probs=70.3
Q ss_pred CCCCCeEEEEEe-ecccCC--CHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCChHH
Q 011969 255 KPNRPALVVSST-SWTPDE--DFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKES 331 (474)
Q Consensus 255 ~~~~~~~i~~~G-~l~~~k--~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~~~ 331 (474)
..+++.+++..| +....| ..+...+.+..+.+ .+..++++|.+.+.+.
T Consensus 177 ~~~~~~i~~~~~~~~~~~k~wp~~~~~~L~~~l~~-----------------------------~~~~ivl~g~~~e~~~ 227 (348)
T d1pswa_ 177 SSERPMIGFCPGAEFGPAKRWPHYHYAELAKQLID-----------------------------EGYQVVLFGSAKDHEA 227 (348)
T ss_dssp CSSSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHH-----------------------------TTCEEEECCCGGGHHH
T ss_pred ccCCCeEEeccccchhhccccchHHHhhhHHHHhh-----------------------------cCCccccccccchHHH
Confidence 345665666655 444334 45557777777765 3567888886666554
Q ss_pred HHHHHHHcCC---C-cEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEec
Q 011969 332 YEEKIRRLRL---K-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS 396 (474)
Q Consensus 332 ~~~~~~~l~l---~-~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~ 396 (474)
.++..+.+.. . -+.+.|. .+-.++..+++.||++|. ...| .+=-|.|+|+|+|+--
T Consensus 228 ~~~~~~~~~~~~~~~~~~l~g~-~sl~el~~li~~a~l~I~---~Dtg-----~~HlAaa~g~p~i~lf 287 (348)
T d1pswa_ 228 GNEILAALNTEQQAWCRNLAGE-TQLDQAVILIAACKAIVT---NDSG-----LMHVAAALNRPLVALY 287 (348)
T ss_dssp HHHHHTTSCHHHHTTEEECTTT-SCHHHHHHHHHTSSEEEE---ESSH-----HHHHHHHTTCCEEEEE
T ss_pred HHHHHHhhhcccccccccccCC-ccHHHHHHHHhcceeEee---cCcc-----HHHHHHHcCCCEEEEE
Confidence 4444433322 2 3555666 789999999999999999 4555 5678999999999974
|
| >d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Hydroquinone glucosyltransferase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=97.18 E-value=0.11 Score=49.75 Aligned_cols=91 Identities=16% Similarity=0.081 Sum_probs=60.6
Q ss_pred CcEEEecCCCCcccHHHHHhcccEEEeeccCCCCCCCchHHHHHHhcCCcEEEecc----ccccccc-ccCCcEEEeC--
Q 011969 342 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY----SCIEELV-KVDKNGLLFS-- 414 (474)
Q Consensus 342 ~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~~e~~p~kv~Eama~G~PVia~~~----~~~~e~v-~~~~~G~l~~-- 414 (474)
+||.+.+ |+|+.++.. ..+++++|. +|- .+.+.||+.+|+|+|+... ......+ +.-+.|+...
T Consensus 334 ~nv~~~~-w~Pq~~lL~-hp~~~~fVt-----HGG--~gS~~EAl~~GvP~v~~P~~~DQ~~nA~rv~e~lG~Gv~l~~~ 404 (471)
T d2vcha1 334 RGFVIPF-WAPQAQVLA-HPSTGGFLT-----HCG--WNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAG 404 (471)
T ss_dssp TEEEEES-CCCHHHHHH-STTEEEEEE-----CCC--HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCC
T ss_pred CCeeecc-cCCHHHHhc-CccCCEEEe-----cCC--ccHHHHHHHcCCCEEEcccccccHHHHHHHHHHheeEEEEecC
Confidence 5788875 588876432 145677775 331 3489999999999999863 2233334 4446777552
Q ss_pred -----CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Q 011969 415 -----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLE 446 (474)
Q Consensus 415 -----~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~ 446 (474)
+.++++++|.+++++ + +.+.+++++.+
T Consensus 405 ~~~~~t~~~l~~ai~~vl~~----~-~~~~~r~ra~~ 436 (471)
T d2vcha1 405 DDGLVRREEVARVVKGLMEG----E-EGKGVRNKMKE 436 (471)
T ss_dssp TTSCCCHHHHHHHHHHHHTS----T-HHHHHHHHHHH
T ss_pred CCCcCCHHHHHHHHHHHhCC----c-HHHHHHHHHHH
Confidence 579999999999985 2 23455555554
|
| >d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Glycogen phosphorylase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=94.75 E-value=0.26 Score=52.29 Aligned_cols=138 Identities=14% Similarity=0.095 Sum_probs=92.8
Q ss_pred cCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCC-hHHH
Q 011969 254 LKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD-KESY 332 (474)
Q Consensus 254 ~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~-~~~~ 332 (474)
+.++. ++++++-|++..|...+.+.-+-.+-+++...++. ......+++.|+-.. -..-
T Consensus 546 ldp~~-lfd~~arRfheYKRq~Ln~~~i~~ly~rlk~~~~~-------------------~~~P~q~IFaGKAhP~d~~g 605 (824)
T d2gj4a1 546 INPNS-LFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNK-------------------FVVPRTVMIGGKAAPGYHMA 605 (824)
T ss_dssp CCTTS-EEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTS-------------------CCCCEEEEEECCCCTTCHHH
T ss_pred CCcch-hhhhheeechhhhhhhhhHhhHHHHHHHhhhcccC-------------------CCCCeEEEEeCCCCCccHHH
Confidence 33444 48899999999999988544332222222222111 123488999996522 2222
Q ss_pred HHHHH---Hc----C----C---CcEEEecCCCCcccHHHHHhcccEEEeeccCCC-CCCCchHHHHHHhcCCcEEEecc
Q 011969 333 EEKIR---RL----R----L---KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS-GLDLPMKVVDMFGCGLPVCAVSY 397 (474)
Q Consensus 333 ~~~~~---~l----~----l---~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s~-~e~~p~kv~Eama~G~PVia~~~ 397 (474)
++.++ ++ + + -+|.|+.- .+-+-...++..||+.+.- |.. -|..|+.=+=+|..|.+-+++--
T Consensus 606 K~iIk~I~~va~~in~dp~~~~~lkVvFlen-Y~v~lA~~li~g~Dvwln~--p~~~~EASGTSgMK~alNGal~lstlD 682 (824)
T d2gj4a1 606 KMIIKLITAIGDVVNHDPVVGDRLRVIFLEN-YRVSLAEKVIPAADLSEQI--STAGTEASGTGNMKFMLNGALTIGTMD 682 (824)
T ss_dssp HHHHHHHHHHHHHHTTCTTTGGGEEEEEETT-CCHHHHHHHGGGCSEEEEC--CCTTSCSCCSHHHHHHHTTCEEEECSC
T ss_pred HHHHHHHHHHHHHHhcChhhccceeEEEcCC-CchHHHHHhhhhhhhhhcC--CCCCcccCCcchhHHHHcCCeeecccc
Confidence 22222 11 1 1 16899976 7788888999999999983 333 37788888889999999999988
Q ss_pred ccccccccc--CCcEEEeC
Q 011969 398 SCIEELVKV--DKNGLLFS 414 (474)
Q Consensus 398 ~~~~e~v~~--~~~G~l~~ 414 (474)
|...|+.+. ++||+++.
T Consensus 683 GwnvEi~~~vg~~N~~~fG 701 (824)
T d2gj4a1 683 GANVEMAEEAGEENFFIFG 701 (824)
T ss_dssp TTHHHHHHHHCGGGSEECS
T ss_pred chHHHHHHhcCcccEEEeC
Confidence 888887764 77999996
|
| >d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Maltodextrin phosphorylase (MALP) species: Escherichia coli [TaxId: 562]
Probab=94.59 E-value=0.15 Score=53.98 Aligned_cols=138 Identities=13% Similarity=0.101 Sum_probs=96.0
Q ss_pred cCCCCCeEEEEEeecccCCCHHHHHHHHHHhHHHHhhhhccCCCchhhHhHhhhcCCccccCCCEEEEEEeCCCCh----
Q 011969 254 LKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK---- 329 (474)
Q Consensus 254 ~~~~~~~~i~~~G~l~~~k~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ivG~g~~~---- 329 (474)
+.++. ++++++-|++..|...+++.-...+.++ |.+........+.+++.|+-...
T Consensus 522 ldp~~-LtigfaRRfa~YKR~~L~~~~i~~l~~~-------------------l~~~~~~~~~Pvq~IfaGKAhP~d~~g 581 (796)
T d1l5wa_ 522 INPQA-IFDIQIKRLHEYKRQHLNLLHILALYKE-------------------IRENPQADRVPRVFLFGAKAAPGYYLA 581 (796)
T ss_dssp CCTTS-EEEEEESCCCGGGTHHHHHHHHHHHHHH-------------------HHTCTTCCCCCEEEEEECCCCTTCHHH
T ss_pred cChhh-ccchhhhhhhhhhcccchhhhHHHHHHH-------------------HhcCcccCCCceEEEEcCCCCCchHHH
Confidence 33444 4889999999999999866655544332 22222222234889999965322
Q ss_pred HHHHHHHHHc--------CC---CcEEEecCCCCcccHHHHHhcccEEEeeccCC-CCCCCchHHHHHHhcCCcEEEecc
Q 011969 330 ESYEEKIRRL--------RL---KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSS-SGLDLPMKVVDMFGCGLPVCAVSY 397 (474)
Q Consensus 330 ~~~~~~~~~l--------~l---~~V~f~g~~v~~~~~~~~l~~adv~v~~~~~s-~~e~~p~kv~Eama~G~PVia~~~ 397 (474)
.++.+.+.++ .+ -+|.|+.- -+-+-...++..|||-+.- |. ..|..|..=+=|+..|.+.+++--
T Consensus 582 K~iIk~I~~va~~in~dp~~~~~~kVVFlen-Ydv~lA~~lv~g~DVwln~--p~~p~EASGTSgMKaalNG~lnlstlD 658 (796)
T d1l5wa_ 582 KNIIFAINKVADVINNDPLVGDKLKVVFLPD-YCVSAAEKLIPAADISEQI--STAGKEASGTGNMKLALNGALTVGTLD 658 (796)
T ss_dssp HHHHHHHHHHHHHHHTCTTTGGGEEEEECSS-CCHHHHHHHGGGCSEEEEC--CCTTTCCCCSHHHHHHHTTCEEEECSC
T ss_pred HHHHHHHHHHHHHhcCChhhccceeEEEeCC-CchHHHHHHhcccchhhhC--CCCCcccCCchHHHHHHcCCeeeeccc
Confidence 1222222211 11 16999976 6778888899999999983 33 348889999999999999999988
Q ss_pred ccccccccc--CCcEEEeC
Q 011969 398 SCIEELVKV--DKNGLLFS 414 (474)
Q Consensus 398 ~~~~e~v~~--~~~G~l~~ 414 (474)
|...|+.++ ++||+++.
T Consensus 659 Gw~vE~~~~vg~eN~f~fG 677 (796)
T d1l5wa_ 659 GANVEIAEKVGEENIFIFG 677 (796)
T ss_dssp TTHHHHHHHHCGGGSEECS
T ss_pred chHHHHHHhcCccceEEec
Confidence 888888764 78999996
|
| >d2ez9a1 c.31.1.3 (A:183-365) Pyruvate oxidase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: DHS-like NAD/FAD-binding domain superfamily: DHS-like NAD/FAD-binding domain family: Pyruvate oxidase and decarboxylase, middle domain domain: Pyruvate oxidase species: Lactobacillus plantarum [TaxId: 1590]
Probab=83.35 E-value=12 Score=31.44 Aligned_cols=107 Identities=12% Similarity=0.101 Sum_probs=62.3
Q ss_pred EEEEEEeCCCC--hHHHHHHHHHcCCCcEE--------------EecCC--CCcccHHHHHhcccEEEeeccCCCCCCCc
Q 011969 318 LLFIITGKGPD--KESYEEKIRRLRLKRVA--------------FRTMW--LSAEDYPLLLGSADLGVCLHTSSSGLDLP 379 (474)
Q Consensus 318 ~~l~ivG~g~~--~~~~~~~~~~l~l~~V~--------------f~g~~--v~~~~~~~~l~~adv~v~~~~~s~~e~~p 379 (474)
-.++|+|.|.. .+++.++++.++++-+. +.|.. ........++..||++++.-+.-.....
T Consensus 32 rPvii~G~G~~~a~~~l~~lae~~~~Pv~tt~~~~g~~~~~hp~~~G~~G~~~~~~~~~~i~~aDlil~vG~~l~~~~~- 110 (183)
T d2ez9a1 32 RPLIYYGIGARKAGKELEQLSKTLKIPLMSTYPAKGIVADRYPAYLGSANRVAQKPANEALAQADVVLFVGNNYPFAEV- 110 (183)
T ss_dssp SEEEEECGGGTTCHHHHHHHHHHHTCCEEECGGGTTSSCTTCTTBCCCCSSSSCHHHHHHHHHCSEEEEESCCCTTTTT-
T ss_pred CeEEEEcCCcccchHHHHHHhhccceEEEeeccccccccccCccccccccccccHHHHhhhhccCceEEeecccCcccc-
Confidence 35899998743 36789999999875432 22210 2245677889999999985221111112
Q ss_pred hHHHHHHhcCCcEEEecccccccccccCCc-EEEeCCHHHHHHHHHHHHhC
Q 011969 380 MKVVDMFGCGLPVCAVSYSCIEELVKVDKN-GLLFSSSSELADQLLMLFKG 429 (474)
Q Consensus 380 ~kv~Eama~G~PVia~~~~~~~e~v~~~~~-G~l~~~~~~la~~i~~l~~~ 429 (474)
...+.-+..+|..+... .++-..... --++.|+.....+|...++.
T Consensus 111 ---~~~~~~~~~iI~Id~d~-~~i~~~~~~~~~i~~D~~~~l~~L~~~l~~ 157 (183)
T d2ez9a1 111 ---SKAFKNTRYFLQIDIDP-AKLGKRHKTDIAVLADAQKTLAAILAQVSE 157 (183)
T ss_dssp ---TTTTTTCSEEEEEESCG-GGTTSSSCCSEEEESCHHHHHHHHHHTCCC
T ss_pred ---eeecccccchheeeccH-HHHhhcCCCCeEEEECHHHHHHHHHHHhhh
Confidence 13355677898776543 233222222 23345777777777766654
|