Citrus Sinensis ID: 012083
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 471 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SGA8 | 464 | UDP-glycosyltransferase 8 | yes | no | 0.927 | 0.941 | 0.388 | 2e-86 | |
| Q9SK82 | 489 | UDP-glycosyltransferase 8 | no | no | 0.944 | 0.910 | 0.313 | 8e-55 | |
| Q9LMF1 | 488 | UDP-glycosyltransferase 8 | no | no | 0.944 | 0.911 | 0.307 | 1e-54 | |
| Q9LME8 | 487 | UDP-glycosyltransferase 8 | no | no | 0.942 | 0.911 | 0.296 | 3e-53 | |
| Q9MB73 | 511 | Limonoid UDP-glucosyltran | N/A | no | 0.906 | 0.835 | 0.325 | 8e-52 | |
| Q9ZWJ3 | 481 | UDP-glycosyltransferase 8 | no | no | 0.929 | 0.910 | 0.299 | 2e-51 | |
| Q9SJL0 | 490 | UDP-glycosyltransferase 8 | no | no | 0.927 | 0.891 | 0.284 | 2e-51 | |
| Q9M9E7 | 489 | UDP-glycosyltransferase 8 | no | no | 0.936 | 0.901 | 0.290 | 3e-51 | |
| Q66PF4 | 555 | Cinnamate beta-D-glucosyl | N/A | no | 0.938 | 0.796 | 0.312 | 6e-50 | |
| Q9LMF0 | 479 | UDP-glycosyltransferase 8 | no | no | 0.942 | 0.926 | 0.295 | 7e-50 |
| >sp|Q9SGA8|U83A1_ARATH UDP-glycosyltransferase 83A1 OS=Arabidopsis thaliana GN=UGT83A1 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 320 bits (819), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 179/461 (38%), Positives = 271/461 (58%), Gaps = 24/461 (5%)
Query: 19 HVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSE-MGDAQQ 77
HV+++ +PAQGHV L+ + LA I++TF+ TEF RI S + +GD
Sbjct: 13 HVVVIPYPAQGHVLPLISFSRYLAKQGIQITFINTEFNHNRIISSLPNSPHEDYVGDQIN 72
Query: 78 LVRIVPLPDGLEPE-DDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKI-TCVIADV 135
LV I PDGLE ++R K++ S+ + MP +EELI+++ + I +CV+AD
Sbjct: 73 LVSI---PDGLEDSPEERNIPGKLSESVLRFMPKKVEELIERMMAETSGGTIISCVVADQ 129
Query: 136 TFGWALQVAAKLELKKASIYTSAPGILAMIMNIPKFIEAGIISSDGIVIKNEKIELSPYL 195
+ GWA++VAAK +++ + +A + + +I K I+ G+I SDG V N+ I+LSP +
Sbjct: 130 SLGWAIEVAAKFGIRRTAFCPAAAASMVLGFSIQKLIDDGLIDSDGTVRVNKTIQLSPGM 189
Query: 196 PAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSANKILPSIIP 255
P +F+W C N Q +FQ + +IE++D +LC HEL +A + P+I+P
Sbjct: 190 PKMETDKFVWVCLKNKESQKNIFQLMLQNNNSIESTDWLLCNSVHELETAAFGLGPNIVP 249
Query: 256 VGPL-----IANGQPT-GNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELAL 309
+GP+ + G + G+F D CL WLD+Q PGSVIY AFGS + Q ELA+
Sbjct: 250 IGPIGWAHSLEEGSTSLGSFLPHDRDCLDWLDRQIPGSVIYVAFGSFGVMGNPQLEELAI 309
Query: 310 GLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTH 369
GLEL +P L ++ G G +D K+V+WAPQ +VL+ ++ C+++H
Sbjct: 310 GLELTKRPVL------WVTGDQQPIKLG-----SDRVKVVRWAPQREVLSSGAIGCFVSH 358
Query: 370 CGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVD 429
CGWNST+EG G+PFLC P+ D K+ ICD WKIGL LE D G++ R E+K+K+D
Sbjct: 359 CGWNSTLEGAQNGIPFLCIPYFADQFINKAYICDVWKIGLGLERDARGVVPRLEVKKKID 418
Query: 430 ELLSN-DVVRKNALKLKELAQKSVTKEGSSSKNLEYFIKQI 469
E++ + + A+K+KE+ KSV K+G S +NL F+ I
Sbjct: 419 EIMRDGGEYEERAMKVKEIVMKSVAKDGISCENLNKFVNWI 459
|
Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: - |
| >sp|Q9SK82|U85A1_ARATH UDP-glycosyltransferase 85A1 OS=Arabidopsis thaliana GN=UGT85A1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 214 bits (546), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 152/485 (31%), Positives = 232/485 (47%), Gaps = 40/485 (8%)
Query: 14 NKTNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMG 73
N HV+ V +PAQGH+ +M++A L VTFV T + R SR S
Sbjct: 8 NSQKPHVVCVPYPAQGHINPMMRVAKLLHARGFYVTFVNTVYNHNRFLRSRG----SNAL 63
Query: 74 DAQQLVRIVPLPDGLEPEDDRKDEAKMTRSISKVMPGYL---EELIQKINQQEEDEKITC 130
D R + DGL PE D +T M L EL+Q+IN + ++C
Sbjct: 64 DGLPSFRFESIADGL-PETDMDATQDITALCESTMKNCLAPFRELLQRINAGDNVPPVSC 122
Query: 131 VIADVTFGWALQVAAKLELKKASIYTSAPGILAMIMNIPKFIEAGIIS-SDGIVIKNEKI 189
+++D + L VA +L + + +T++ ++ FIE G+ D + E +
Sbjct: 123 IVSDGCMSFTLDVAEELGVPEVLFWTTSGCAFLAYLHFYLFIEKGLCPLKDESYLTKEYL 182
Query: 190 E--LSPYLPAASPAEFLWNCPG-----NPSLQTLMFQYINVIRQNIEASDRILCTWF--- 239
E + ++P + L + P NP + F R AS IL T+
Sbjct: 183 EDTVIDFIPTMKNVK-LKDIPSFIRTTNPDDVMISFALRETERAK-RASAIILNTFDDLE 240
Query: 240 HELAPSANKILPSIIPVGPL--IAN---------GQPTGNFWSEDLTCLSWLDKQPPGSV 288
H++ + ILP + VGPL +AN G + N W E++ CL WLD + SV
Sbjct: 241 HDVVHAMQSILPPVYSVGPLHLLANREIEEGSEIGMMSSNLWKEEMECLDWLDTKTQNSV 300
Query: 289 IYAAFGSISKLSQQQFNELALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKM 348
IY FGSI+ LS +Q E A GL +G+ FL +RP + G P + + D +
Sbjct: 301 IYINFGSITVLSVKQLVEFAWGLAGSGKEFLWVIRPDLVAGEEAMVPPDFLMETKDRSML 360
Query: 349 VKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIG 408
W PQEKVL+HP++ +LTHCGWNS +E +S GVP +CWP+ D CD+W +G
Sbjct: 361 ASWCPQEKVLSHPAIGGFLTHCGWNSILESLSCGVPMVCWPFFADQQMNCKFCCDEWDVG 420
Query: 409 LWLEPDDNGIIGRHEIKRKVDELLSND---VVRKNALKLKELAQKSVT-KEGSSSKNLEY 464
+ + G + R E++ V EL+ + +R+ A++ + LA+K+ K GSS N E
Sbjct: 421 IEI----GGDVKREEVEAVVRELMDGEKGKKMREKAVEWQRLAEKATEHKLGSSVMNFET 476
Query: 465 FIKQI 469
+ +
Sbjct: 477 VVSKF 481
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Involved in the O-glucosylation of trans-zeatin and dihydrozeatin. Also active in vitro on cis-zeatin. Not active on N-glucosylated substrates. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
| >sp|Q9LMF1|U85A3_ARATH UDP-glycosyltransferase 85A3 OS=Arabidopsis thaliana GN=UGT85A3 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 214 bits (545), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 149/484 (30%), Positives = 245/484 (50%), Gaps = 39/484 (8%)
Query: 14 NKTNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMG 73
N+ HV+ V +PAQGH+ +MK+A L VTFV T + R+ SR +
Sbjct: 8 NEQKPHVVCVPYPAQGHINPMMKVAKLLHVKGFHVTFVNTVYNHNRLLRSRGANAL---- 63
Query: 74 DAQQLVRIVPLPDGLEPE---DDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITC 130
D + +PDGL PE D +D ++ S +K ++L+Q+I +E+ ++C
Sbjct: 64 DGLPSFQFESIPDGL-PETGVDATQDIPALSESTTKNCLVPFKKLLQRIVTREDVPPVSC 122
Query: 131 VIADVTFGWALQVAAKLELKKASIYTSAPGILAMIMNIPKFIEAGIIS-SDGIVIKNEKI 189
+++D + + L VA +L + + +T++ ++ FIE G+ D + E +
Sbjct: 123 IVSDGSMSFTLDVAEELGVPEIHFWTTSACGFMAYLHFYLFIEKGLCPVKDASCLTKEYL 182
Query: 190 E-LSPYLPAASPAEFLWNCPG-----NPSLQTLMFQYINVIRQNIEASDRILCTWF---H 240
+ + ++P+ + + L + P NP+ L F R AS IL T+ H
Sbjct: 183 DTVIDWIPSMNNVK-LKDIPSFIRTTNPNDIMLNFVVREACRTK-RASAIILNTFDDLEH 240
Query: 241 ELAPSANKILPSIIPVGPL--IAN---------GQPTGNFWSEDLTCLSWLDKQPPGSVI 289
++ S ILP + P+GPL + N G+ N W E+ CL WL+ + SV+
Sbjct: 241 DIIQSMQSILPPVYPIGPLHLLVNREIEEDSEIGRMGSNLWKEETECLGWLNTKSRNSVV 300
Query: 290 YAAFGSISKLSQQQFNELALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMV 349
Y FGSI+ ++ Q E A GL G+ FL +RP + G P +A+ AD +
Sbjct: 301 YVNFGSITIMTTAQLLEFAWGLAATGKEFLWVMRPDSVAGEEAVIPKEFLAETADRRMLT 360
Query: 350 KWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGL 409
W PQEKVL+HP+V +LTHCGWNST+E +S GVP +CWP+ + CD+W++G+
Sbjct: 361 SWCPQEKVLSHPAVGGFLTHCGWNSTLESLSCGVPMVCWPFFAEQQTNCKFSCDEWEVGI 420
Query: 410 WLEPDDNGIIGRHEIKRKVDELLSND---VVRKNALKLKELAQKSVTKE-GSSSKNLEYF 465
+ G + R E++ V EL+ + +R+ A++ + LA+K+ GSS N E
Sbjct: 421 ----EIGGDVKRGEVEAVVRELMDGEKGKKMREKAVEWRRLAEKATKLPCGSSVINFETI 476
Query: 466 IKQI 469
+ ++
Sbjct: 477 VNKV 480
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
| >sp|Q9LME8|U85A7_ARATH UDP-glycosyltransferase 85A7 OS=Arabidopsis thaliana GN=UGT85A7 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 209 bits (533), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 144/486 (29%), Positives = 237/486 (48%), Gaps = 42/486 (8%)
Query: 14 NKTNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMG 73
N HV+ V +PAQGH+ ++K+A L VTFV T + R+ SR +
Sbjct: 8 NAQKPHVVCVPYPAQGHINPMLKVAKLLYAKGFHVTFVNTLYNHNRLLRSRGPNAL---- 63
Query: 74 DAQQLVRIVPLPDGL-EPEDDRKDEA-KMTRSISKVMPGYLEELIQKINQQEEDEKITCV 131
D R +PDGL E + DR + SI K +E++++IN +++ ++C+
Sbjct: 64 DGFPSFRFESIPDGLPETDGDRTQHTPTVCMSIEKNCLAPFKEILRRINDKDDVPPVSCI 123
Query: 132 IADVTFGWALQVAAKLELKKASIYTSAPGILAMIMNIPKFIEAGI--ISSDGIVIKNEKI 189
++D + L A +L + + +T++ I++ FIE G+ + + K
Sbjct: 124 VSDGVMSFTLDAAEELGVPEVIFWTNSACGFMTILHFYLFIEKGLSPFKDESYMSKEHLD 183
Query: 190 ELSPYLPAAS-------PAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTW---F 239
+ ++P+ P+ P N L L I + ++ AS IL T+
Sbjct: 184 TVIDWIPSMKNLRLKDIPSYIRTTNPDNIMLNFL----IREVERSKRASAIILNTFDELE 239
Query: 240 HELAPSANKILPSIIPVGPL-----------IANGQPTGNFWSEDLTCLSWLDKQPPGSV 288
H++ S ILP + +GPL GQ N W E++ CL WLD + P SV
Sbjct: 240 HDVIQSMQSILPPVYSIGPLHLLVKEEINEASEIGQMGLNLWREEMECLDWLDTKTPNSV 299
Query: 289 IYAAFGSISKLSQQQFNELALGLELAGQPFLCGVRPGFINGSS-TNNPDGLVAKVADFGK 347
++ FG I+ +S +Q E A GL + + FL +RP + G + P +A+ D
Sbjct: 300 LFVNFGCITVMSAKQLEEFAWGLAASRKEFLWVIRPNLVVGEAMVVLPQEFLAETIDRRM 359
Query: 348 MVKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKI 407
+ W PQEKVL+HP++ +LTHCGWNST+E ++ GVP +CWP + CD+W +
Sbjct: 360 LASWCPQEKVLSHPAIGGFLTHCGWNSTLESLAGGVPMICWPCFSEQPTNCKFCCDEWGV 419
Query: 408 GLWLEPDDNGIIGRHEIKRKVDELLSND---VVRKNALKLKELAQKSVT-KEGSSSKNLE 463
G+ + D + R E++ V EL+ + +R+ A + + LA+++ K GSS NLE
Sbjct: 420 GIEIGKD----VKREEVETVVRELMDGEKGKKLREKAEEWRRLAEEATRYKHGSSVMNLE 475
Query: 464 YFIKQI 469
I ++
Sbjct: 476 TLIHKV 481
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
| >sp|Q9MB73|LGT_CITUN Limonoid UDP-glucosyltransferase OS=Citrus unshiu PE=2 SV=1 | Back alignment and function description |
|---|
Score = 205 bits (521), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 157/483 (32%), Positives = 246/483 (50%), Gaps = 56/483 (11%)
Query: 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFS----EMG 73
VHVLLVSFP GHV L++L LA +T T E K+ R+ G+F+ +G
Sbjct: 7 VHVLLVSFPGHGHVNPLLRLGRLLASKGFFLTLTTPESFG---KQMRKAGNFTYEPTPVG 63
Query: 74 DAQQLVRIVPLPDGLEPEDDRKDE-----AKMTRSISKVMPGYLEELIQKINQQEEDEKI 128
D +R DG + +D R+++ A++ +V+P ++I+K EE +
Sbjct: 64 DG--FIRFEFFEDGWDEDDPRREDLDQYMAQLELIGKQVIP----KIIKK--SAEEYRPV 115
Query: 129 TCVIADVTFGWALQVAAKLELKKASIYTSAPGILAM-------IMNIPKFIEAGIISSDG 181
+C+I + W VA L L A ++ + A ++ P E I
Sbjct: 116 SCLINNPFIPWVSDVAESLGLPSAMLWVQSCACFAAYYHYFHGLVPFPSEKEPEIDVQLP 175
Query: 182 IVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHE 241
+ + E+ +L ++P FL + ++ QY +N+ IL F+E
Sbjct: 176 CMPLLKHDEMPSFLHPSTPYPFL--------RRAILGQY-----ENLGKPFCILLDTFYE 222
Query: 242 LAPS----ANKILPSIIPVGPLIANGQ-PTGNFWSEDLT---CLSWLDKQPPGSVIYAAF 293
L KI P I PVGPL N + PT + + C+ WLDK+PP SV+Y +F
Sbjct: 223 LEKEIIDYMAKICP-IKPVGPLFKNPKAPTLTVRDDCMKPDECIDWLDKKPPSSVVYISF 281
Query: 294 GSISKLSQQQFNELALGLELAGQPFLCGVRPGFINGSS--TNNPDGLVAKVADFGKMVKW 351
G++ L Q+Q E+ L +G FL ++P + + PDG + KV D GK+V+W
Sbjct: 282 GTVVYLKQEQVEEIGYALLNSGISFLWVMKPPPEDSGVKIVDLPDGFLEKVGDKGKVVQW 341
Query: 352 APQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWL 411
+PQEKVLAHPSVAC++THCGWNSTME ++ GVP + +P D + +CD +K GL L
Sbjct: 342 SPQEKVLAHPSVACFVTHCGWNSTMESLASGVPVITFPQWGDQVTDAMYLCDVFKTGLRL 401
Query: 412 --EPDDNGIIGRHEIKRKVDELLSND---VVRKNALKLKELAQKSVTKEGSSSKNLEYFI 466
+N II R E+++ + E + + +NALK K+ A+++V GSS +N++ F+
Sbjct: 402 CRGEAENRIISRDEVEKCLLEATAGPKAVALEENALKWKKEAEEAVADGGSSDRNIQAFV 461
Query: 467 KQI 469
++
Sbjct: 462 DEV 464
|
Involved in the glucosylation of limonoids. Citrus unshiu (taxid: 55188) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 1 EC: 0 |
| >sp|Q9ZWJ3|U85A2_ARATH UDP-glycosyltransferase 85A2 OS=Arabidopsis thaliana GN=UGT85A2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 144/481 (29%), Positives = 233/481 (48%), Gaps = 43/481 (8%)
Query: 19 HVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQL 78
HV+ V +PAQGH+ +MK+A L +TFV T + R+ SR + D
Sbjct: 10 HVVCVPYPAQGHINPMMKVAKLLYAKGFHITFVNTVYNHNRLLRSRGPNAV----DGLPS 65
Query: 79 VRIVPLPDGLEPEDD---RKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADV 135
R +PDGL PE D +D + S K +EL+++IN +++ ++C+++D
Sbjct: 66 FRFESIPDGL-PETDVDVTQDIPTLCESTMKHCLAPFKELLRQINARDDVPPVSCIVSDG 124
Query: 136 TFGWALQVAAKLELKKASIYT-SAPGILAMIMNIPKFIEAGI--ISSDGIVIKNEKIELS 192
+ L A +L + + +T SA G LA + +FIE G+ I + + K
Sbjct: 125 CMSFTLDAAEELGVPEVLFWTTSACGFLAYLYYY-RFIEKGLSPIKDESYLTKEHLDTKI 183
Query: 193 PYLPAASPAEFLWNCPG-----NPSLQTLMFQYINVIRQNIEASDRILCTWF----HELA 243
++P+ L + P NP +M +I + + I+ F H++
Sbjct: 184 DWIPSMKNLR-LKDIPSFIRTTNP--DDIMLNFIIREADRAKRASAIILNTFDDLEHDVI 240
Query: 244 PSANKILPSIIPVGPL-IANGQPTG----------NFWSEDLTCLSWLDKQPPGSVIYAA 292
S I+P + +GPL + Q +G N W E+ CL WL+ + SV+Y
Sbjct: 241 QSMKSIVPPVYSIGPLHLLEKQESGEYSEIGRTGSNLWREETECLDWLNTKARNSVVYVN 300
Query: 293 FGSISKLSQQQFNELALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWA 352
FGSI+ LS +Q E A GL G+ FL +RP + G P + AD + W
Sbjct: 301 FGSITVLSAKQLVEFAWGLAATGKEFLWVIRPDLVAGDEAMVPPEFLTATADRRMLASWC 360
Query: 353 PQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLE 412
PQEKVL+HP++ +LTHCGWNST+E + GVP +CWP+ + D+W++G+ +
Sbjct: 361 PQEKVLSHPAIGGFLTHCGWNSTLESLCGGVPMVCWPFFAEQQTNCKFSRDEWEVGIEI- 419
Query: 413 PDDNGIIGRHEIKRKVDELLSNDV---VRKNALKLKELAQKSVT-KEGSSSKNLEYFIKQ 468
G + R E++ V EL+ + +R+ A + + LA ++ K GSS N E + +
Sbjct: 420 ---GGDVKREEVEAVVRELMDEEKGKNMREKAEEWRRLANEATEHKHGSSKLNFEMLVNK 476
Query: 469 I 469
+
Sbjct: 477 V 477
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
| >sp|Q9SJL0|U86A1_ARATH UDP-glycosyltransferase 86A1 OS=Arabidopsis thaliana GN=UGT86A1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 135/475 (28%), Positives = 238/475 (50%), Gaps = 38/475 (8%)
Query: 19 HVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGD---- 74
H++++ +P QGHV + LA +LA +TFV T+ I I + Q + GD
Sbjct: 10 HIMMIPYPLQGHVIPFVHLAIKLASHGFTITFVNTDSIHHHISTAHQ----DDAGDIFSA 65
Query: 75 ----AQQLVRIVPLPDGLEPEDDRK-DEAKMTRSISKVMPGYLEELIQKINQQEEDEKIT 129
Q +R + DG + DR + + I V ++++LI K+++++ D +T
Sbjct: 66 ARSSGQHDIRYTTVSDGFPLDFDRSLNHDQFFEGILHVFSAHVDDLIAKLSRRD-DPPVT 124
Query: 130 CVIADVTFGWALQVAAKLELKKASIYTSAPGILAMIMNIPKFIEAGIISSDGIVIKNEK- 188
C+IAD + W+ + K L S +T +L + ++ I G S + N K
Sbjct: 125 CLIADTFYVWSSMICDKHNLVNVSFWTEPALVLNLYYHMDLLISNGHFKS----LDNRKD 180
Query: 189 -IELSPYLPAASPAE---FLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAP 244
I+ P + A P + +L + T++++ + ++++ +D ++C EL P
Sbjct: 181 VIDYVPGVKAIEPKDLMSYLQVSDKDVDTNTVVYRILFKAFKDVKRADFVVCNTVQELEP 240
Query: 245 SANKILPSIIPV---GPLIANGQ--PTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKL 299
+ L + PV GP+ + PT + W+E C WL +P GSV+Y +FGS + +
Sbjct: 241 DSLSALQAKQPVYAIGPVFSTDSVVPT-SLWAES-DCTEWLKGRPTGSVLYVSFGSYAHV 298
Query: 300 SQQQFNELALGLELAGQPFLCGVRPGFINGSSTNN--PDGLVAKVADFGKMVKWAPQEKV 357
+++ E+A GL L+G F+ +RP + GS+ + P G V + D G +V+W Q +V
Sbjct: 299 GKKEIVEIAHGLLLSGISFIWVLRPDIV-GSNVPDFLPAGFVDQAQDRGLVVQWCCQMEV 357
Query: 358 LAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNG 417
+++P+V + THCGWNS +E + G+P LC+P D + + DDW IG+ L +
Sbjct: 358 ISNPAVGGFFTHCGWNSILESVWCGLPLLCYPLLTDQFTNRKLVVDDWCIGINLC--EKK 415
Query: 418 IIGRHEIKRKVDELLSNDV---VRKNALKLKELAQKSVTKEGSSSKNLEYFIKQI 469
I R ++ V L++ + +R N K+K + +VT GSS N F+ ++
Sbjct: 416 TITRDQVSANVKRLMNGETSSELRNNVEKVKRHLKDAVTTVGSSETNFNLFVSEV 470
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
| >sp|Q9M9E7|U85A4_ARATH UDP-glycosyltransferase 85A4 OS=Arabidopsis thaliana GN=UGT85A4 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 202 bits (515), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 139/478 (29%), Positives = 237/478 (49%), Gaps = 37/478 (7%)
Query: 19 HVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQL 78
H + + +PAQGH+ ++KLA L VTFV T++ RI +SR + + +
Sbjct: 13 HAMCIPYPAQGHINPMLKLAKLLHARGFHVTFVNTDYNHRRILQSRGPHALNGLPS---- 68
Query: 79 VRIVPLPDGL--EPEDDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVT 136
R +PDGL D ++D K+ S ++LI ++N + ++C+I+D +
Sbjct: 69 FRFETIPDGLPWTDVDAKQDMLKLIDSTINNCLAPFKDLILRLNSGSDIPPVSCIISDAS 128
Query: 137 FGWALQVAAKLELKKASIYTSAPGILAMIMNIPKFIEAGII----SSDGIVIKNEKIELS 192
+ + A +L++ ++T++ L + ++ K IE II SSD +I+
Sbjct: 129 MSFTIDAAEELKIPVVLLWTNSATALILYLHYQKLIEKEIIPLKDSSDLKKHLETEIDWI 188
Query: 193 PYLPAASPAEFL-WNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWF----HELAPSAN 247
P + +F + NP Q M +I + I+ + I F H + S
Sbjct: 189 PSMKKIKLKDFPDFVTTTNP--QDPMISFILHVTGRIKRASAIFINTFEKLEHNVLLSLR 246
Query: 248 KILPSIIPVGP--LIANGQPTGN---------FWSEDLTCLSWLDKQPPGSVIYAAFGSI 296
+LP I VGP ++ N + N W E+ L WLD + +VIY FGS+
Sbjct: 247 SLLPQIYSVGPFQILENREIDKNSEIRKLGLNLWEEETESLDWLDTKAEKAVIYVNFGSL 306
Query: 297 SKLSQQQFNELALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVK-WAPQE 355
+ L+ +Q E A GL +G+ FL VR G ++G + P +++ + G ++K W QE
Sbjct: 307 TVLTSEQILEFAWGLARSGKEFLWVVRSGMVDGDDSILPAEFLSETKNRGMLIKGWCSQE 366
Query: 356 KVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDD 415
KVL+HP++ +LTHCGWNST+E + GVP +CWP+ D L + C+DW IG+ + +
Sbjct: 367 KVLSHPAIGGFLTHCGWNSTLESLYAGVPMICWPFFADQLTNRKFCCEDWGIGMEIGEE- 425
Query: 416 NGIIGRHEIKRKVDELLSND---VVRKNALKLKELAQK-SVTKEGSSSKNLEYFIKQI 469
+ R ++ V EL+ + +R+ ++ + LA++ S GSS N E + ++
Sbjct: 426 ---VKRERVETVVKELMDGEKGKRLREKVVEWRRLAEEASAPPLGSSYVNFETVVNKV 480
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
| >sp|Q66PF4|CGT_FRAAN Cinnamate beta-D-glucosyltransferase OS=Fragaria ananassa GN=GT2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 198 bits (504), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 150/480 (31%), Positives = 244/480 (50%), Gaps = 38/480 (7%)
Query: 10 SESLNKTNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSF 69
SESL VHV LVSF QGHV L++L RLA + VTF T E + + +++S +
Sbjct: 3 SESL----VHVFLVSFIGQGHVNPLLRLGKRLAAKGLLVTFCTAECVGKEMRKSNGITDE 58
Query: 70 SE-MGDAQQLVRIVPLPDG-LEPEDDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEK 127
+ +GD +R D E E R+D + V + E+I+K E+
Sbjct: 59 PKPVGDG--FIRFEFFKDRWAEDEPMRQDLDLYLPQLELVGKEVIPEMIKK--NAEQGRP 114
Query: 128 ITCVIADVTFGWALQVAAKLELKKASIYTSAPGILAMIMNIPKFIEAGIIS--SDGIVIK 185
++C+I + W VA L L A ++ + LA + G++ S+ +
Sbjct: 115 VSCLINNPFIPWVCDVAESLGLPSAMLWVQSAACLAAYYHY----YHGLVPFPSESDMFC 170
Query: 186 NEKIELSPYLPAASPAEFLWNCPGNPSLQ-TLMFQYINVIRQNIEASDRILCTWFHELAP 244
+ +I P L FL+ P L+ ++ QY N+E IL F EL
Sbjct: 171 DVQIPSMPLLKYDEVPSFLYPTSPYPFLRRAILGQY-----GNLEKPFCILMDTFQELES 225
Query: 245 SANKILPSIIP---VGPLIANGQPT----GNFWSEDLTCLSWLDKQPPGSVIYAAFGSIS 297
+ + + P VGPL N + G+F D + + WLD +P SV+Y +FGS+
Sbjct: 226 EIIEYMARLCPIKAVGPLFKNPKAQNAVRGDFMEADDSIIGWLDTKPKSSVVYISFGSVV 285
Query: 298 KLSQQQFNELALGLELAGQPFLCGVRPGFINGSST--NNPDGLVAKVADFGKMVKWAPQE 355
L Q+Q +E+A GL +G F+ ++P + P+G + K D GK+V+W+PQE
Sbjct: 286 YLKQEQVDEIAHGLLSSGVSFIWVMKPPHPDSGFELLVLPEGFLEKAGDRGKVVQWSPQE 345
Query: 356 KVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWL---E 412
K+L HPS AC++THCGWNSTME ++ G+P + +P D + + D++K+G+ + E
Sbjct: 346 KILEHPSTACFVTHCGWNSTMESLTSGMPVVAFPQWGDQVTDAKYLVDEFKVGVRMCRGE 405
Query: 413 PDDNGIIGRHEIKRKVDELLSNDV---VRKNALKLKELAQKSVTKEGSSSKNLEYFIKQI 469
+D +I R E+++ + E S +++NALK K A+ + ++ GSS +NL+ F+ ++
Sbjct: 406 AEDR-VIPRDEVEKCLLEATSGSKAAEMKQNALKWKAAAEAAFSEGGSSDRNLQAFVDEV 464
|
Broad spectrum multifunctional glucosyltransferase. Catalyzes the formation of cinnamic acid and p-coumaric acid glucose esters during fruit ripening. Accepted substrates range from derivatives of cinnamic acid and benzoic acid to heterocyclic and aliphatic compounds, resulting in the formation of O- and S-glucose esters and O-glucosides. May also be involved in detoxification of xenobiotics. Fragaria ananassa (taxid: 3747) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 7 EC: 7 |
| >sp|Q9LMF0|U85A5_ARATH UDP-glycosyltransferase 85A5 OS=Arabidopsis thaliana GN=UGT85A5 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 198 bits (504), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 139/470 (29%), Positives = 226/470 (48%), Gaps = 26/470 (5%)
Query: 19 HVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQL 78
HV+ + FPAQGH+ ++K+A L VTFV T + R+ SR S D
Sbjct: 13 HVVCIPFPAQGHINPMLKVAKLLYARGFHVTFVNTNYNHNRLIRSRGPNSL----DGLPS 68
Query: 79 VRIVPLPDGL--EPEDDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVT 136
R +PDGL E +D +D + S K +EL+++IN ++ ++C+++D
Sbjct: 69 FRFESIPDGLPEENKDVMQDVPTLCESTMKNCLAPFKELLRRINTTKDVPPVSCIVSDGV 128
Query: 137 FGWALQVAAKLELKKASIYT-SAPGILAMIMNIPKFIEAGIISSDGIVIKNEKIELSPYL 195
+ L A +L + +T SA G LA ++ +FIE G+ + KI P +
Sbjct: 129 MSFTLDAAEELGVPDVLFWTPSACGFLAY-LHFYRFIEKGLSPIKDESSLDTKINWIPSM 187
Query: 196 PAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWF---HELAPSANKILPS 252
+ + ++ +++ + AS IL T+ H++ S I+P
Sbjct: 188 KNLGLKDIPSFIRATNTEDIMLNFFVHEADRAKRASAIILNTFDSLEHDVVRSIQSIIPQ 247
Query: 253 IIPVGPL--IAN---------GQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQ 301
+ +GPL N GQ N W E++ CL WLD + P SV+Y FGSI+ +S
Sbjct: 248 VYTIGPLHLFVNRDIDEESDIGQIGTNMWREEMECLDWLDTKSPNSVVYVNFGSITVMSA 307
Query: 302 QQFNELALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHP 361
+Q E A GL + FL +RP + G P + + A+ + W PQEKVL+HP
Sbjct: 308 KQLVEFAWGLAATKKDFLWVIRPDLVAGDVPMLPPDFLIETANRRMLASWCPQEKVLSHP 367
Query: 362 SVACYLTHCGWNSTMEGISMGVPFLCWP-WGHDHLYIKSCICDDWKIGLWLEPDDNGIIG 420
+V +LTH GWNST+E +S GVP +CWP + K C CD+W++G+ + D
Sbjct: 368 AVGGFLTHSGWNSTLESLSGGVPMVCWPFFAEQQTNCKYC-CDEWEVGMEIGGDVRREEV 426
Query: 421 RHEIKRKVDELLSNDVVRKNALKLKELAQKSVTK-EGSSSKNLEYFIKQI 469
++ +D +R+ A + + LA+++ GSS N + + ++
Sbjct: 427 EELVRELMDG-DKGKKMRQKAEEWQRLAEEATKPIYGSSELNFQMVVDKV 475
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 471 | ||||||
| 225457255 | 456 | PREDICTED: UDP-glycosyltransferase 83A1 | 0.946 | 0.978 | 0.544 | 1e-142 | |
| 359491659 | 457 | PREDICTED: UDP-glycosyltransferase 83A1- | 0.951 | 0.980 | 0.522 | 1e-138 | |
| 297733895 | 745 | unnamed protein product [Vitis vinifera] | 0.951 | 0.601 | 0.522 | 1e-137 | |
| 225457267 | 456 | PREDICTED: UDP-glycosyltransferase 83A1 | 0.951 | 0.982 | 0.520 | 1e-137 | |
| 224108003 | 453 | predicted protein [Populus trichocarpa] | 0.940 | 0.977 | 0.542 | 1e-134 | |
| 225457271 | 462 | PREDICTED: UDP-glycosyltransferase 83A1- | 0.951 | 0.969 | 0.509 | 1e-133 | |
| 359491655 | 457 | PREDICTED: UDP-glycosyltransferase 83A1- | 0.951 | 0.980 | 0.503 | 1e-131 | |
| 225457265 | 455 | PREDICTED: UDP-glycosyltransferase 83A1 | 0.949 | 0.982 | 0.501 | 1e-130 | |
| 147802898 | 456 | hypothetical protein VITISV_022262 [Viti | 0.951 | 0.982 | 0.496 | 1e-129 | |
| 225457259 | 458 | PREDICTED: UDP-glycosyltransferase 83A1 | 0.951 | 0.978 | 0.493 | 1e-126 |
| >gi|225457255|ref|XP_002281128.1| PREDICTED: UDP-glycosyltransferase 83A1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 247/454 (54%), Positives = 332/454 (73%), Gaps = 8/454 (1%)
Query: 19 HVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQL 78
HVL+V FPAQGHVA LMKLAH+++D IKVTFV TEFI +I + S + Q
Sbjct: 6 HVLVVPFPAQGHVAPLMKLAHKVSDHGIKVTFVNTEFIHAKI-----MASMPDKDGKQSR 60
Query: 79 VRIVPLPDGLEPEDDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFG 138
+ +V +PDGL PE +R D +T SI VMPG++++LI+KIN+ +DEKITCVIAD T G
Sbjct: 61 IELVSVPDGLNPEANRNDAVMLTESILTVMPGHVKDLIEKINRTNDDEKITCVIADTTVG 120
Query: 139 WALQVAAKLELKKASIYTSAPGILAMIMNIPKFIEAGIISSDGIVIKNEKIELSPYLPAA 198
WAL+VA K+ +K+A+++ PG LA+ ++IPK IEA II +DG +KNE I L+ +PA
Sbjct: 121 WALEVAEKMGIKRAAVWPGGPGDLALALHIPKLIEARIIDTDGAPMKNELIHLAEDIPAF 180
Query: 199 SPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSANKILPSIIPVGP 258
S WN +P ++ ++F Y + Q ++ S+ +LC F+EL SA ++ I+P+GP
Sbjct: 181 SITGLSWNLSDDPKIRDVIFGYAFRVSQTVKLSNWLLCNSFYELHSSACNLISDILPIGP 240
Query: 259 LIANGQPT---GNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELAG 315
L+A+ P GNFW+ED TCL WLDKQP GSVIY AFGS++ LSQ QFNELALG+EL G
Sbjct: 241 LLASNHPAHSAGNFWAEDSTCLRWLDKQPAGSVIYVAFGSLAILSQHQFNELALGIELVG 300
Query: 316 QPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWNST 375
+PFL R F NGS+ PDG + +V+++GK+V+WA QEKVLAHPSVAC+L+HCGWNST
Sbjct: 301 RPFLWVARSDFTNGSAVEYPDGFMQRVSEYGKIVEWADQEKVLAHPSVACFLSHCGWNST 360
Query: 376 MEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSND 435
MEG+SMGVPFLCWP D ++ ICD WK+GL L+PD NGII RHEIK K+++LLS+D
Sbjct: 361 MEGVSMGVPFLCWPQFADQFCNRNFICDIWKVGLGLDPDGNGIISRHEIKIKIEKLLSDD 420
Query: 436 VVRKNALKLKELAQKSVTKEGSSSKNLEYFIKQI 469
++ NALKLKE+A++SV+++GSSSKN + FI+ +
Sbjct: 421 GIKANALKLKEMARESVSEDGSSSKNFKAFIEAV 454
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359491659|ref|XP_002281210.2| PREDICTED: UDP-glycosyltransferase 83A1-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 496 bits (1277), Expect = e-138, Method: Compositional matrix adjust.
Identities = 239/457 (52%), Positives = 330/457 (72%), Gaps = 9/457 (1%)
Query: 19 HVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQL 78
HVL++ FPAQGHVA LMK A++++D IKVTFV ++FI E++ + + + +A+
Sbjct: 6 HVLIIPFPAQGHVAPLMKFAYQISDHGIKVTFVNSDFIHEKL-----VAALPDEDEARSR 60
Query: 79 VRIVPLPDGLEPEDDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFG 138
+ + +PDGL P +DRKD K+T SI +VMPG+L+E ++K+N +DEKITCVIAD FG
Sbjct: 61 IGLASIPDGLGPGEDRKDSLKLTDSIFRVMPGHLKEFMEKVNNSNDDEKITCVIADSAFG 120
Query: 139 WALQVAAKLELKKASIYTSAPGILAMIMNIPKFIEAGII-SSDGIVIKNEKIELSPYLPA 197
WAL+VA K+ +K+ + PG LA+ +IP+ IEAG++ S+DG ++ +E I L+ +PA
Sbjct: 121 WALEVADKMGIKRVAFCPFGPGSLALAFHIPRLIEAGLLNSTDGSLLNDELICLAKDIPA 180
Query: 198 ASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSANKILPSIIPVG 257
S W+CP +P+LQ ++F+ I S+ ++C +EL SA ++P+I+P+G
Sbjct: 181 FSSNRLPWSCPSDPTLQEVIFRLAFKDISAINLSNWLICNSVYELDSSACDLIPNILPIG 240
Query: 258 PLIAN---GQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELA 314
PLIAN G GNFW ED TC+SWLDKQP GSVIY AFGS++ LSQ QFNELALG+EL
Sbjct: 241 PLIANNHLGHYPGNFWPEDSTCISWLDKQPAGSVIYVAFGSLAILSQHQFNELALGIELV 300
Query: 315 GQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWNS 374
G+PFL VR F NGS PDG + +VA+ GK+V WAPQEKVLAHPSVAC+L+HCGWNS
Sbjct: 301 GRPFLWVVRSDFTNGSDAEYPDGFIERVAENGKIVSWAPQEKVLAHPSVACFLSHCGWNS 360
Query: 375 TMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSN 434
TM+GI MGVPFLCWP+ D + +S ICD WK+GL L PD+NG I RHEIK+K++ L+S+
Sbjct: 361 TMDGIGMGVPFLCWPYVVDQFHNQSYICDKWKVGLGLNPDENGFISRHEIKKKIEMLVSD 420
Query: 435 DVVRKNALKLKELAQKSVTKEGSSSKNLEYFIKQITE 471
DV++ NA KLKE+ +KSV++ GSS KN + F++ + +
Sbjct: 421 DVIKANAEKLKEMTRKSVSEGGSSYKNFQTFVEVMKQ 457
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297733895|emb|CBI15142.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 239/457 (52%), Positives = 330/457 (72%), Gaps = 9/457 (1%)
Query: 19 HVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQL 78
HVL++ FPAQGHVA LMK A++++D IKVTFV ++FI E++ + + + +A+
Sbjct: 294 HVLIIPFPAQGHVAPLMKFAYQISDHGIKVTFVNSDFIHEKL-----VAALPDEDEARSR 348
Query: 79 VRIVPLPDGLEPEDDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFG 138
+ + +PDGL P +DRKD K+T SI +VMPG+L+E ++K+N +DEKITCVIAD FG
Sbjct: 349 IGLASIPDGLGPGEDRKDSLKLTDSIFRVMPGHLKEFMEKVNNSNDDEKITCVIADSAFG 408
Query: 139 WALQVAAKLELKKASIYTSAPGILAMIMNIPKFIEAGII-SSDGIVIKNEKIELSPYLPA 197
WAL+VA K+ +K+ + PG LA+ +IP+ IEAG++ S+DG ++ +E I L+ +PA
Sbjct: 409 WALEVADKMGIKRVAFCPFGPGSLALAFHIPRLIEAGLLNSTDGSLLNDELICLAKDIPA 468
Query: 198 ASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSANKILPSIIPVG 257
S W+CP +P+LQ ++F+ I S+ ++C +EL SA ++P+I+P+G
Sbjct: 469 FSSNRLPWSCPSDPTLQEVIFRLAFKDISAINLSNWLICNSVYELDSSACDLIPNILPIG 528
Query: 258 PLIAN---GQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELA 314
PLIAN G GNFW ED TC+SWLDKQP GSVIY AFGS++ LSQ QFNELALG+EL
Sbjct: 529 PLIANNHLGHYPGNFWPEDSTCISWLDKQPAGSVIYVAFGSLAILSQHQFNELALGIELV 588
Query: 315 GQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWNS 374
G+PFL VR F NGS PDG + +VA+ GK+V WAPQEKVLAHPSVAC+L+HCGWNS
Sbjct: 589 GRPFLWVVRSDFTNGSDAEYPDGFIERVAENGKIVSWAPQEKVLAHPSVACFLSHCGWNS 648
Query: 375 TMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSN 434
TM+GI MGVPFLCWP+ D + +S ICD WK+GL L PD+NG I RHEIK+K++ L+S+
Sbjct: 649 TMDGIGMGVPFLCWPYVVDQFHNQSYICDKWKVGLGLNPDENGFISRHEIKKKIEMLVSD 708
Query: 435 DVVRKNALKLKELAQKSVTKEGSSSKNLEYFIKQITE 471
DV++ NA KLKE+ +KSV++ GSS KN + F++ + +
Sbjct: 709 DVIKANAEKLKEMTRKSVSEGGSSYKNFQTFVEVMKQ 745
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225457267|ref|XP_002284350.1| PREDICTED: UDP-glycosyltransferase 83A1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 493 bits (1270), Expect = e-137, Method: Compositional matrix adjust.
Identities = 238/457 (52%), Positives = 329/457 (71%), Gaps = 9/457 (1%)
Query: 19 HVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQL 78
HVL++ PAQGHV LMK A++++D IKVTFV ++FI E++ + + + +AQ
Sbjct: 5 HVLIIPCPAQGHVTPLMKFAYQISDHGIKVTFVNSDFIHEKL-----VAALPDEDEAQSR 59
Query: 79 VRIVPLPDGLEPEDDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFG 138
+ + +PDGL P +DRKD K T S+ +VMPG+L+ELI+K+N +DEKITCVIAD T G
Sbjct: 60 IGLASIPDGLGPGEDRKDLLKSTDSMLRVMPGHLKELIEKVNNSNDDEKITCVIADTTVG 119
Query: 139 WALQVAAKLELKKASIYTSAPGILAMIMNIPKFIEAGIISS-DGIVIKNEKIELSPYLPA 197
WAL+VA K+ +K + PG LA++ +IP+ IEAG ++ DG ++ +E I L+ +PA
Sbjct: 120 WALEVAEKMGIKSVAFCPCGPGSLALLFHIPRLIEAGHVNGIDGSLLNDELISLAKDIPA 179
Query: 198 ASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSANKILPSIIPVG 257
S + W+CP +P+LQ ++FQ+ + S+ +LC +EL SA ++P+I+P+G
Sbjct: 180 FSSNKLPWSCPSDPNLQKVIFQFAFKDISAMNLSNWLLCNSVYELDSSACDLIPNILPIG 239
Query: 258 PLIAN---GQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELA 314
PL+A+ G TGNFW ED TC+SWLDKQP GSVIY AFGS++ LSQ QFNELALG+EL
Sbjct: 240 PLLASNHLGHYTGNFWPEDSTCISWLDKQPAGSVIYVAFGSVAILSQNQFNELALGIELV 299
Query: 315 GQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWNS 374
G+PFL VR F NGS+ PDG + +VA+ GK+V WAPQEKVLAHPSVAC+L+HCGWNS
Sbjct: 300 GRPFLWVVRSDFTNGSAAEYPDGFIERVAEHGKIVSWAPQEKVLAHPSVACFLSHCGWNS 359
Query: 375 TMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSN 434
TM+GI MGVPFLCWP+ D + +S ICD WK+GL L PD+NG I RHEIK+K++ L+S+
Sbjct: 360 TMDGIGMGVPFLCWPYFADQFHNQSYICDKWKVGLGLNPDENGFISRHEIKKKIEMLVSD 419
Query: 435 DVVRKNALKLKELAQKSVTKEGSSSKNLEYFIKQITE 471
D ++ NA KLKE+A+KSV + GSS KN + F++ + +
Sbjct: 420 DGIKANAEKLKEMARKSVIEGGSSYKNFQTFVEALKQ 456
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224108003|ref|XP_002314683.1| predicted protein [Populus trichocarpa] gi|222863723|gb|EEF00854.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 249/459 (54%), Positives = 326/459 (71%), Gaps = 16/459 (3%)
Query: 7 ASESESLNKTNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQL 66
S S S ++ N HVLL+ P QGHVA MKL H+L KVTF+TTE I +I++
Sbjct: 4 TSISTSPHQANAHVLLLPLPLQGHVAPFMKLGHQLVRHGSKVTFLTTESIRSQIEK---- 59
Query: 67 GSFSEMGDAQQLVRIVPLPDGLEPEDDRKDEAKMTRSISKVMPGYLEELIQKINQQE--E 124
+ + ++ +RI+ +PDGL EDD KD+ ++ +S V+PG+LE LI+K N+ E
Sbjct: 60 -----VDEEEEHMRIISVPDGLALEDDHKDDNRLVQSFLHVIPGHLENLIRKTNEDELIG 114
Query: 125 DEKITCVIADVTFGW-ALQVAAKLELKKASIYTSAPGILAMIMNIPKFIEAGIISSD-GI 182
+ITC+I DV +++A K+ LK A + SAPG+LA+I++IPK IEAGII +D G
Sbjct: 115 IGQITCLIVDVVLSRDPIEIAEKMGLKHAIFFPSAPGVLALILHIPKLIEAGIIDADDGT 174
Query: 183 VIKNEKIELSPYLPAASPAEFLWNCPGNPSL--QTLMFQYINVIRQNIEASDRILCTWFH 240
V KNEKI+LSP LPA A+F+W PGN S Q +FQY+ ++ Q ++ + +LC WFH
Sbjct: 175 VEKNEKIQLSPNLPAMDSADFIWKRPGNKSNFNQKDVFQYLLLVNQILKVPNWVLCNWFH 234
Query: 241 ELAPSANKILPSIIPVGPLIA-NGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKL 299
EL PSAN +LP+II VGPL A +G+ TGNF S DLTCL WLD+Q PGSVIY AFGS SK
Sbjct: 235 ELDPSANALLPNIISVGPLPAHDGKSTGNFRSGDLTCLPWLDRQSPGSVIYIAFGSTSKF 294
Query: 300 SQQQFNELALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLA 359
SQQQF+ELA GLEL G+PFL VR FI+G S PDG +V + GK+V WAPQEKVLA
Sbjct: 295 SQQQFHELAFGLELIGKPFLWAVRSDFIDGISIEYPDGFQDRVKNLGKIVNWAPQEKVLA 354
Query: 360 HPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGII 419
HPS+ACY+THCGWNSTME I+MG+P LCWP+ D + KSC+C WK+GL ++PD++G++
Sbjct: 355 HPSIACYMTHCGWNSTMESINMGIPMLCWPYFGDQFWNKSCVCYGWKVGLEIDPDESGMV 414
Query: 420 GRHEIKRKVDELLSNDVVRKNALKLKELAQKSVTKEGSS 458
RHEIKRKVDELLS++ ++ NALKLKELA + + GSS
Sbjct: 415 TRHEIKRKVDELLSDEGIKANALKLKELALNNAYEGGSS 453
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225457271|ref|XP_002284355.1| PREDICTED: UDP-glycosyltransferase 83A1-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 233/457 (50%), Positives = 323/457 (70%), Gaps = 9/457 (1%)
Query: 19 HVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQL 78
HVL++ FPAQGHV LMK A++++D IKVTFV ++FI E++ + + + +A+
Sbjct: 11 HVLIIPFPAQGHVTPLMKFAYQISDHGIKVTFVNSDFIHEKL-----VAALPDEDEARSR 65
Query: 79 VRIVPLPDGLEPEDDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFG 138
+ + +PDGL P +DRKD K T SI +VMPG+L+ELI+K+N +DEKITCVIAD T G
Sbjct: 66 IGLASIPDGLGPGEDRKDPLKSTDSILRVMPGHLKELIEKVNNSNDDEKITCVIADTTVG 125
Query: 139 WALQVAAKLELKKASIYTSAPGILAMIMNIPKFIEAGIISS-DGIVIKNEKIELSPYLPA 197
WAL+VA K+ ++ + PG LA++ +IP+ IEAG ++ DG ++ E I L+ +PA
Sbjct: 126 WALEVAEKMGIESVAFCPCGPGTLALVFDIPRLIEAGHVNGIDGSLLNEELICLAKDIPA 185
Query: 198 ASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSANKILPSIIPVG 257
S W CP + ++Q ++F+ S+ +LC +EL SA ++P+I+P+G
Sbjct: 186 FSSNRLPWGCPSDLTVQEILFRLALQCIPAKNLSNWLLCNSVYELDSSACDLIPNILPIG 245
Query: 258 PLIAN---GQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELA 314
PL+A+ G TGNFW ED TC+ WLDKQP GSVIY AFGS++ LSQ QFNELALG+EL
Sbjct: 246 PLLASNHLGHYTGNFWPEDSTCIGWLDKQPAGSVIYVAFGSLAILSQNQFNELALGIELV 305
Query: 315 GQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWNS 374
G+PFL VR F NGS+ PDG + +VA+ GK+V WAPQEKVLAHPSVAC+L+HCGWNS
Sbjct: 306 GRPFLWVVRSDFTNGSAAEYPDGFIERVAEHGKIVSWAPQEKVLAHPSVACFLSHCGWNS 365
Query: 375 TMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSN 434
TM+GI +GVPFLCWP+ D + +S ICD WK+GL L PD+NG I RHEIK+K++ L+S+
Sbjct: 366 TMDGIGIGVPFLCWPYFADQFHNQSYICDKWKVGLGLNPDENGFISRHEIKKKIEMLVSD 425
Query: 435 DVVRKNALKLKELAQKSVTKEGSSSKNLEYFIKQITE 471
D ++ NA KLKE+A+KSV + GSS KN + F++ + +
Sbjct: 426 DGIKANAEKLKEMARKSVIEGGSSYKNFQTFVEALKQ 462
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359491655|ref|XP_002281171.2| PREDICTED: UDP-glycosyltransferase 83A1-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 230/457 (50%), Positives = 323/457 (70%), Gaps = 9/457 (1%)
Query: 19 HVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQL 78
HVL++ PAQGHVA LMKLAHR++D IKVTFV ++FI ++ L + +A+
Sbjct: 6 HVLIIPLPAQGHVAPLMKLAHRISDHGIKVTFVNSDFI-----HAKLLAALPHEAEARSG 60
Query: 79 VRIVPLPDGLEPEDDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFG 138
+ + +PDGL+P DDRKD K+T SIS+VMP +L++LI+K+N+ +DE+I CV+AD+T G
Sbjct: 61 IGLASIPDGLDPGDDRKDLPKLTESISRVMPSHLKDLIEKVNRSNDDEQIICVVADITLG 120
Query: 139 W-ALQVAAKLELKKASIYTSAPGILAMIMNIPKFIEAGIISSDGIVIKNEKIELSPYLPA 197
W A++VA K+ + + S P ILA+ ++IPK IEA I+ +DG + +E I LS +P
Sbjct: 121 WWAMEVAEKMGILGVPFFPSGPEILALALHIPKLIEARILDADGSPLNDELICLSKDIPV 180
Query: 198 ASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSANKILPSIIPVG 257
S W CP +P +Q +F+ + +I Q ++ S +L + +EL SA +++P+I+ +G
Sbjct: 181 FSSNRLPWCCPIDPKIQETIFRTLLIIIQKMDFSKWLLSNFVYELDSSACELIPNILSIG 240
Query: 258 PLIAN---GQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELA 314
PL+A+ G GNFW ED TC+ WLDKQP GSVIY AFGS++ +Q+QFNELALGLEL
Sbjct: 241 PLLASHHLGHYAGNFWPEDSTCIGWLDKQPAGSVIYVAFGSLAIFNQRQFNELALGLELV 300
Query: 315 GQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWNS 374
G+PFL VR F +GS PDG + +VAD GK+V WAPQE+VLAHPSVAC+ +HCGWNS
Sbjct: 301 GRPFLWVVRSDFTDGSVAEYPDGFIERVADHGKIVSWAPQEEVLAHPSVACFFSHCGWNS 360
Query: 375 TMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSN 434
TM+ ISMGVPFLCWP+ D + +S IC WK+GL L PD+ G I RH IK K+++L+S+
Sbjct: 361 TMDSISMGVPFLCWPYFADQFHNQSYICKKWKVGLGLNPDEKGFISRHGIKMKIEKLVSD 420
Query: 435 DVVRKNALKLKELAQKSVTKEGSSSKNLEYFIKQITE 471
D ++ NA KLKE+A+KSV++ GSS KN + FI+ + +
Sbjct: 421 DGIKANAKKLKEMARKSVSEGGSSYKNFKTFIEAMKQ 457
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225457265|ref|XP_002281262.1| PREDICTED: UDP-glycosyltransferase 83A1 [Vitis vinifera] gi|147822731|emb|CAN70537.1| hypothetical protein VITISV_040069 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 229/457 (50%), Positives = 324/457 (70%), Gaps = 10/457 (2%)
Query: 19 HVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQL 78
HVL++ FPAQGHV MK A++++D IKVTFV ++FI E++ + + + +A+
Sbjct: 5 HVLIIPFPAQGHVTPFMKFAYQISDHGIKVTFVNSDFIHEKL-----VAALPDEDEARSR 59
Query: 79 VRIVPLPDGLEPEDDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFG 138
+ + +PDGL P +DRKD K+T SI +VMPG+L+ELI+K+N +DEKITCVIAD FG
Sbjct: 60 IGLASIPDGLGPGEDRKDSLKLTDSILRVMPGHLKELIEKVNNSNDDEKITCVIADSAFG 119
Query: 139 WALQVAAKLELKKASIYTSAPGILAMIMNIPKFIEAGII-SSDGIVIKNEKIELSPYLPA 197
WAL+VA K+ +K+ + PG LA+ +IP+ IEAG++ ++DG ++ +E I L+ +PA
Sbjct: 120 WALEVADKMGIKRVAFCPFGPGSLALAFHIPRLIEAGLLNTTDGSLLNHEFICLAKDIPA 179
Query: 198 ASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSANKILPSIIPVG 257
W+CP +P+LQ + F+ Q + S+ +L +EL SA +++P+I+ +G
Sbjct: 180 FISNRLPWSCPTDPTLQEICFRLAFKAIQVMNLSNWLLSNSVYELDSSACELIPNILSIG 239
Query: 258 PLIAN---GQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELA 314
PL+A+ G GNFW ED TC+ WLDKQP GSVIY AFGS++ +Q+QFNELALGLEL
Sbjct: 240 PLLASHHLGHYAGNFWHEDSTCIGWLDKQPAGSVIYVAFGSLAIFNQRQFNELALGLELV 299
Query: 315 GQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWNS 374
G+PFL VR F +GS PD + +VA+ GK+V WAPQEKVLAHPSVAC+L+HCGWNS
Sbjct: 300 GRPFLWVVRSDFADGSVAEYPD-FIERVAENGKIVSWAPQEKVLAHPSVACFLSHCGWNS 358
Query: 375 TMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSN 434
TM+ I MGVPFLCWP+ D + +S ICD WK+GL L PD+NG I RHEIK+K+++L+S+
Sbjct: 359 TMDAIGMGVPFLCWPYFADQFHNQSYICDKWKVGLGLNPDENGFISRHEIKKKIEKLVSD 418
Query: 435 DVVRKNALKLKELAQKSVTKEGSSSKNLEYFIKQITE 471
D ++ NA KLKE+A+KSV + GSS KN + F++ + +
Sbjct: 419 DGIKANAEKLKEMARKSVIEGGSSYKNFQTFVEALKQ 455
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147802898|emb|CAN66174.1| hypothetical protein VITISV_022262 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 227/457 (49%), Positives = 324/457 (70%), Gaps = 9/457 (1%)
Query: 19 HVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQL 78
HVL++ FPAQGHV LMK A++++ IKVTFV ++FI E++ + + + +A+
Sbjct: 5 HVLIIPFPAQGHVTPLMKFAYQISIHGIKVTFVNSDFIHEKL-----VAALPDEDEARSR 59
Query: 79 VRIVPLPDGLEPEDDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFG 138
+ + +PDGL P +DRKD K+T SI +VMPG+L+ELI+K+N +DEKITCVIAD FG
Sbjct: 60 IGLASIPDGLGPGEDRKDSLKLTDSILRVMPGHLKELIEKVNNSNDDEKITCVIADSAFG 119
Query: 139 WALQVAAKLELKKASIYTSAPGILAMIMNIPKFIEAGII-SSDGIVIKNEKIELSPYLPA 197
WAL+VA K+ +K+ + PG LA+ +IP+ IEAG++ S+DG ++ +E I L+ +PA
Sbjct: 120 WALEVADKMGIKRVAFCPFGPGSLALAFHIPRLIEAGLLNSTDGSLLNHELICLAKDIPA 179
Query: 198 ASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSANKILPSIIPVG 257
W+CP +P++Q + F+ Q + S+ +L +EL SA +++P+I+ +G
Sbjct: 180 FISNRLPWSCPTDPTVQEICFRLAFKAIQVMNLSNWLLSNSVYELDSSACELIPNILSIG 239
Query: 258 PLIAN---GQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELA 314
PL+A+ G GNFW ED TC+ WLDKQP GSVIY AFGS++ +Q+QFNELALGLEL
Sbjct: 240 PLLASHHLGHYAGNFWPEDSTCIGWLDKQPAGSVIYVAFGSLAIFNQRQFNELALGLELV 299
Query: 315 GQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWNS 374
G+PF+ VR F +GS PDG + +VA+ GK+V WAPQE+VL HPSVAC+L+HCGWNS
Sbjct: 300 GRPFIWVVRSDFADGSVAEYPDGFIGRVAENGKIVSWAPQEEVLDHPSVACFLSHCGWNS 359
Query: 375 TMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSN 434
TM+GI MGVPFLCWP+ D + +S ICD WK+GL L PD+NG I R EIK+K+++L+S+
Sbjct: 360 TMDGIGMGVPFLCWPYFADQFHNQSYICDKWKVGLGLNPDENGFISRREIKKKIEKLVSD 419
Query: 435 DVVRKNALKLKELAQKSVTKEGSSSKNLEYFIKQITE 471
D ++ NA KLKE+A+KSV + GSS KN + F++ + +
Sbjct: 420 DGIKANAEKLKEMARKSVIEGGSSYKNFQTFVEALKQ 456
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225457259|ref|XP_002281187.1| PREDICTED: UDP-glycosyltransferase 83A1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 226/458 (49%), Positives = 317/458 (69%), Gaps = 10/458 (2%)
Query: 19 HVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQL 78
HVL++ PAQGHVA LMKLAHR++D IKVTFV ++FI ++ L + +A+
Sbjct: 6 HVLIIPLPAQGHVAPLMKLAHRISDHGIKVTFVNSDFI-----HAKLLAALPHEAEARSG 60
Query: 79 VRIVPLPDGLEPEDDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTF- 137
+ + +PDGL+P DDRK+ K+T SIS+VMPG+L++LI+K+N +DE+ITCVIAD+T
Sbjct: 61 IGLASIPDGLDPGDDRKNMLKLTESISRVMPGHLKDLIEKVNHSNDDEQITCVIADITLE 120
Query: 138 GWALQVAAKLELKKASIYTSAPGILAMIMNIPKFIEAGII-SSDGIVIKNEKIELSPYLP 196
W ++VA K+ ++ GI A+ ++IPK IEAGI+ S+DG + +E I +S +P
Sbjct: 121 RWPMEVAEKMGIEGVPFCPMGAGIWALALHIPKLIEAGIVNSTDGSPLNDELICVSKGIP 180
Query: 197 AASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSANKILPSIIPV 256
S W P + +Q +F+ Q +++S +LC +EL SA ++P+++P+
Sbjct: 181 VLSSNSLPWQWPIDLKIQESVFRLYLTSIQIMDSSKWLLCNCVYELDSSACDLIPNLLPI 240
Query: 257 GPLIANGQP---TGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLEL 313
GPL+A+ P NFW ED TC+ WLDKQP GSVIY AFGS + L+Q QFNELALG+EL
Sbjct: 241 GPLLASSDPGHYAANFWPEDSTCIGWLDKQPAGSVIYVAFGSFTILTQHQFNELALGIEL 300
Query: 314 AGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWN 373
G+PFL VR F + S+ PDG + +VAD GK+V WAPQE+VLAHPSVAC+ +HCGWN
Sbjct: 301 VGRPFLWVVRSDFTDESAAEYPDGFIERVADHGKIVSWAPQEEVLAHPSVACFFSHCGWN 360
Query: 374 STMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLS 433
STM GI MGVPFLCWP+ D + +S IC+ WK+GL L PD NG I RHEIK K+++L+S
Sbjct: 361 STMGGIGMGVPFLCWPYLGDQFHNQSYICEKWKVGLGLNPDKNGFISRHEIKMKIEKLVS 420
Query: 434 NDVVRKNALKLKELAQKSVTKEGSSSKNLEYFIKQITE 471
+D ++ NA KLKE+A+KSV++ GSS +N + FI+ + +
Sbjct: 421 DDGIKANAEKLKEMARKSVSEGGSSYRNFKTFIEAMKQ 458
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 471 | ||||||
| TAIR|locus:2078608 | 464 | AT3G02100 [Arabidopsis thalian | 0.927 | 0.941 | 0.383 | 1e-82 | |
| TAIR|locus:2196490 | 488 | UGT85A3 "AT1G22380" [Arabidops | 0.479 | 0.463 | 0.355 | 1.4e-58 | |
| TAIR|locus:2009557 | 489 | UGT85A1 [Arabidopsis thaliana | 0.475 | 0.458 | 0.371 | 2.6e-57 | |
| TAIR|locus:2196501 | 481 | UGT85A2 "UDP-glucosyl transfer | 0.479 | 0.469 | 0.338 | 1.1e-54 | |
| TAIR|locus:2196496 | 479 | UGT85A5 "UDP-glucosyl transfer | 0.934 | 0.918 | 0.310 | 1.3e-52 | |
| TAIR|locus:2057976 | 490 | AT2G36970 [Arabidopsis thalian | 0.940 | 0.904 | 0.285 | 5.1e-51 | |
| TAIR|locus:2089880 | 496 | UGT84A2 "UDP-glucosyl transfer | 0.944 | 0.897 | 0.299 | 2.5e-49 | |
| TAIR|locus:2091628 | 461 | AT3G22250 [Arabidopsis thalian | 0.433 | 0.442 | 0.358 | 3.7e-48 | |
| TAIR|locus:2046193 | 482 | AT2G28080 "AT2G28080" [Arabido | 0.932 | 0.910 | 0.299 | 1.2e-47 | |
| TAIR|locus:2045238 | 456 | UGT74D1 "UDP-glucosyl transfer | 0.910 | 0.940 | 0.299 | 1.1e-46 |
| TAIR|locus:2078608 AT3G02100 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 829 (296.9 bits), Expect = 1.0e-82, P = 1.0e-82
Identities = 177/461 (38%), Positives = 273/461 (59%)
Query: 19 HVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSE-MGDAQQ 77
HV+++ +PAQGHV L+ + LA I++TF+ TEF RI S + +GD
Sbjct: 13 HVVVIPYPAQGHVLPLISFSRYLAKQGIQITFINTEFNHNRIISSLPNSPHEDYVGDQ-- 70
Query: 78 LVRIVPLPDGLEPE-DDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKI-TCVIADV 135
+ +V +PDGLE ++R K++ S+ + MP +EELI+++ + I +CV+AD
Sbjct: 71 -INLVSIPDGLEDSPEERNIPGKLSESVLRFMPKKVEELIERMMAETSGGTIISCVVADQ 129
Query: 136 TFGWALQVAAKLELKKASIYTSAPGILAMIMNIPKFIEAGIISSDGIVIKNEKIELSPYL 195
+ GWA++VAAK +++ + +A + + +I K I+ G+I SDG V N+ I+LSP +
Sbjct: 130 SLGWAIEVAAKFGIRRTAFCPAAAASMVLGFSIQKLIDDGLIDSDGTVRVNKTIQLSPGM 189
Query: 196 PAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSANKILPSIIP 255
P +F+W C N Q +FQ + +IE++D +LC HEL +A + P+I+P
Sbjct: 190 PKMETDKFVWVCLKNKESQKNIFQLMLQNNNSIESTDWLLCNSVHELETAAFGLGPNIVP 249
Query: 256 VGPL-----IANGQPT-GNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELAL 309
+GP+ + G + G+F D CL WLD+Q PGSVIY AFGS + Q ELA+
Sbjct: 250 IGPIGWAHSLEEGSTSLGSFLPHDRDCLDWLDRQIPGSVIYVAFGSFGVMGNPQLEELAI 309
Query: 310 GLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTH 369
GLEL +P L ++ G P + +D K+V+WAPQ +VL+ ++ C+++H
Sbjct: 310 GLELTKRPVL------WVTGDQ--QP---IKLGSDRVKVVRWAPQREVLSSGAIGCFVSH 358
Query: 370 CGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVD 429
CGWNST+EG G+PFLC P+ D K+ ICD WKIGL LE D G++ R E+K+K+D
Sbjct: 359 CGWNSTLEGAQNGIPFLCIPYFADQFINKAYICDVWKIGLGLERDARGVVPRLEVKKKID 418
Query: 430 ELLSND-VVRKNALKLKELAQKSVTKEGSSSKNLEYFIKQI 469
E++ + + A+K+KE+ KSV K+G S +NL F+ I
Sbjct: 419 EIMRDGGEYEERAMKVKEIVMKSVAKDGISCENLNKFVNWI 459
|
|
| TAIR|locus:2196490 UGT85A3 "AT1G22380" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 408 (148.7 bits), Expect = 1.4e-58, Sum P(2) = 1.4e-58
Identities = 87/245 (35%), Positives = 134/245 (54%)
Query: 240 HELAPSANKILPSIIPVGPL--IAN---------GQPTGNFWSEDLTCLSWLDKQPPGSV 288
H++ S ILP + P+GPL + N G+ N W E+ CL WL+ + SV
Sbjct: 240 HDIIQSMQSILPPVYPIGPLHLLVNREIEEDSEIGRMGSNLWKEETECLGWLNTKSRNSV 299
Query: 289 IYAAFGSISKLSQQQFNELALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKM 348
+Y FGSI+ ++ Q E A GL G+ FL +RP + G P +A+ AD +
Sbjct: 300 VYVNFGSITIMTTAQLLEFAWGLAATGKEFLWVMRPDSVAGEEAVIPKEFLAETADRRML 359
Query: 349 VKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIG 408
W PQEKVL+HP+V +LTHCGWNST+E +S GVP +CWP+ + CD+W++G
Sbjct: 360 TSWCPQEKVLSHPAVGGFLTHCGWNSTLESLSCGVPMVCWPFFAEQQTNCKFSCDEWEVG 419
Query: 409 LWLEPDDNGIIGRHEIKRKVDELLSNDV---VRKNALKLKELAQKSVTKE-GSSSKNLEY 464
+ + G + R E++ V EL+ + +R+ A++ + LA+K+ GSS N E
Sbjct: 420 IEI----GGDVKRGEVEAVVRELMDGEKGKKMREKAVEWRRLAEKATKLPCGSSVINFET 475
Query: 465 FIKQI 469
+ ++
Sbjct: 476 IVNKV 480
|
|
| TAIR|locus:2009557 UGT85A1 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 421 (153.3 bits), Expect = 2.6e-57, Sum P(2) = 2.6e-57
Identities = 91/245 (37%), Positives = 136/245 (55%)
Query: 240 HELAPSANKILPSIIPVGPL--IAN---------GQPTGNFWSEDLTCLSWLDKQPPGSV 288
H++ + ILP + VGPL +AN G + N W E++ CL WLD + SV
Sbjct: 241 HDVVHAMQSILPPVYSVGPLHLLANREIEEGSEIGMMSSNLWKEEMECLDWLDTKTQNSV 300
Query: 289 IYAAFGSISKLSQQQFNELALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKM 348
IY FGSI+ LS +Q E A GL +G+ FL +RP + G P + + D +
Sbjct: 301 IYINFGSITVLSVKQLVEFAWGLAGSGKEFLWVIRPDLVAGEEAMVPPDFLMETKDRSML 360
Query: 349 VKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDH-LYIKSCICDDWKI 407
W PQEKVL+HP++ +LTHCGWNS +E +S GVP +CWP+ D + K C CD+W +
Sbjct: 361 ASWCPQEKVLSHPAIGGFLTHCGWNSILESLSCGVPMVCWPFFADQQMNCKFC-CDEWDV 419
Query: 408 GLWLEPDDNGIIGRHEIKRKVDELLSNDV---VRKNALKLKELAQKSVT-KEGSSSKNLE 463
G+ + G + R E++ V EL+ + +R+ A++ + LA+K+ K GSS N E
Sbjct: 420 GIEI----GGDVKREEVEAVVRELMDGEKGKKMREKAVEWQRLAEKATEHKLGSSVMNFE 475
Query: 464 YFIKQ 468
+ +
Sbjct: 476 TVVSK 480
|
|
| TAIR|locus:2196501 UGT85A2 "UDP-glucosyl transferase 85A2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 385 (140.6 bits), Expect = 1.1e-54, Sum P(2) = 1.1e-54
Identities = 83/245 (33%), Positives = 129/245 (52%)
Query: 240 HELAPSANKILPSIIPVGPL-IANGQPTG----------NFWSEDLTCLSWLDKQPPGSV 288
H++ S I+P + +GPL + Q +G N W E+ CL WL+ + SV
Sbjct: 237 HDVIQSMKSIVPPVYSIGPLHLLEKQESGEYSEIGRTGSNLWREETECLDWLNTKARNSV 296
Query: 289 IYAAFGSISKLSQQQFNELALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKM 348
+Y FGSI+ LS +Q E A GL G+ FL +RP + G P + AD +
Sbjct: 297 VYVNFGSITVLSAKQLVEFAWGLAATGKEFLWVIRPDLVAGDEAMVPPEFLTATADRRML 356
Query: 349 VKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIG 408
W PQEKVL+HP++ +LTHCGWNST+E + GVP +CWP+ + D+W++G
Sbjct: 357 ASWCPQEKVLSHPAIGGFLTHCGWNSTLESLCGGVPMVCWPFFAEQQTNCKFSRDEWEVG 416
Query: 409 LWLEPDDNGIIGRHEIKRKVDELLSNDV---VRKNALKLKELAQKSVT-KEGSSSKNLEY 464
+ + G + R E++ V EL+ + +R+ A + + LA ++ K GSS N E
Sbjct: 417 IEI----GGDVKREEVEAVVRELMDEEKGKNMREKAEEWRRLANEATEHKHGSSKLNFEM 472
Query: 465 FIKQI 469
+ ++
Sbjct: 473 LVNKV 477
|
|
| TAIR|locus:2196496 UGT85A5 "UDP-glucosyl transferase 85A5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 545 (196.9 bits), Expect = 1.3e-52, P = 1.3e-52
Identities = 147/474 (31%), Positives = 233/474 (49%)
Query: 19 HVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQL 78
HV+ + FPAQGH+ ++K+A L VTFV T + R+ SR S D
Sbjct: 13 HVVCIPFPAQGHINPMLKVAKLLYARGFHVTFVNTNYNHNRLIRSRGPNSL----DGLPS 68
Query: 79 VRIVPLPDGL--EPEDDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVT 136
R +PDGL E +D +D + S K +EL+++IN ++ ++C+++D
Sbjct: 69 FRFESIPDGLPEENKDVMQDVPTLCESTMKNCLAPFKELLRRINTTKDVPPVSCIVSDGV 128
Query: 137 FGWALQVAAKLELKKASIYT-SAPGILAMIMNIPKFIEAGIISSDGIVIKNEKIELSPYL 195
+ L A +L + +T SA G LA + + +FIE G+ + KI P +
Sbjct: 129 MSFTLDAAEELGVPDVLFWTPSACGFLAYL-HFYRFIEKGLSPIKDESSLDTKINWIPSM 187
Query: 196 PAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWF---HELAPSANKILPS 252
+ + ++ +++ + AS IL T+ H++ S I+P
Sbjct: 188 KNLGLKDIPSFIRATNTEDIMLNFFVHEADRAKRASAIILNTFDSLEHDVVRSIQSIIPQ 247
Query: 253 IIPVGPL--IAN---------GQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQ 301
+ +GPL N GQ N W E++ CL WLD + P SV+Y FGSI+ +S
Sbjct: 248 VYTIGPLHLFVNRDIDEESDIGQIGTNMWREEMECLDWLDTKSPNSVVYVNFGSITVMSA 307
Query: 302 QQFNELALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHP 361
+Q E A GL + FL +RP + G P + + A+ + W PQEKVL+HP
Sbjct: 308 KQLVEFAWGLAATKKDFLWVIRPDLVAGDVPMLPPDFLIETANRRMLASWCPQEKVLSHP 367
Query: 362 SVACYLTHCGWNSTMEGISMGVPFLCWPW-GHDHLYIKSCICDDWKIGLWLEPDDNGIIG 420
+V +LTH GWNST+E +S GVP +CWP+ K C CD+W++G+ + G +
Sbjct: 368 AVGGFLTHSGWNSTLESLSGGVPMVCWPFFAEQQTNCKYC-CDEWEVGMEI----GGDVR 422
Query: 421 RHEIKRKVDELLSNDVVRKNALKLKE---LAQKSVTKE--GSSSKNLEYFIKQI 469
R E++ V EL+ D +K K +E LA+++ TK GSS N + + ++
Sbjct: 423 REEVEELVRELMDGDKGKKMRQKAEEWQRLAEEA-TKPIYGSSELNFQMVVDKV 475
|
|
| TAIR|locus:2057976 AT2G36970 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 530 (191.6 bits), Expect = 5.1e-51, P = 5.1e-51
Identities = 134/469 (28%), Positives = 238/469 (50%)
Query: 19 HVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQ--LGS-FSEM-GD 74
H++++ +P QGHV + LA +LA +TFV T+ I I + Q G FS
Sbjct: 10 HIMMIPYPLQGHVIPFVHLAIKLASHGFTITFVNTDSIHHHISTAHQDDAGDIFSAARSS 69
Query: 75 AQQLVRIVPLPDGLEPEDDRK-DEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIA 133
Q +R + DG + DR + + I V ++++LI K+++++ D +TC+IA
Sbjct: 70 GQHDIRYTTVSDGFPLDFDRSLNHDQFFEGILHVFSAHVDDLIAKLSRRD-DPPVTCLIA 128
Query: 134 DVTFGWALQVAAKLELKKASIYTSAPGILAMIMNIPKFIEAGIISSDGIVIKNEKIELSP 193
D + W+ + K L S +T +L + ++ I G S + + + I+ P
Sbjct: 129 DTFYVWSSMICDKHNLVNVSFWTEPALVLNLYYHMDLLISNGHFKS--LDNRKDVIDYVP 186
Query: 194 YLPAASPAE---FLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSANKIL 250
+ A P + +L + T++++ + ++++ +D ++C EL P + L
Sbjct: 187 GVKAIEPKDLMSYLQVSDKDVDTNTVVYRILFKAFKDVKRADFVVCNTVQELEPDSLSAL 246
Query: 251 PSIIPV---GPLIANGQ--PTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFN 305
+ PV GP+ + PT + W+E C WL +P GSV+Y +FGS + + +++
Sbjct: 247 QAKQPVYAIGPVFSTDSVVPT-SLWAES-DCTEWLKGRPTGSVLYVSFGSYAHVGKKEIV 304
Query: 306 ELALGLELAGQPFLCGVRPGFINGSSTNN--PDGLVAKVADFGKMVKWAPQEKVLAHPSV 363
E+A GL L+G F+ +RP + GS+ + P G V + D G +V+W Q +V+++P+V
Sbjct: 305 EIAHGLLLSGISFIWVLRPDIV-GSNVPDFLPAGFVDQAQDRGLVVQWCCQMEVISNPAV 363
Query: 364 ACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHE 423
+ THCGWNS +E + G+P LC+P D + + DDW IG+ L + I R +
Sbjct: 364 GGFFTHCGWNSILESVWCGLPLLCYPLLTDQFTNRKLVVDDWCIGINL--CEKKTITRDQ 421
Query: 424 IKRKVDELLSNDV---VRKNALKLKELAQKSVTKEGSSSKNLEYFIKQI 469
+ V L++ + +R N K+K + +VT GSS N F+ ++
Sbjct: 422 VSANVKRLMNGETSSELRNNVEKVKRHLKDAVTTVGSSETNFNLFVSEV 470
|
|
| TAIR|locus:2089880 UGT84A2 "UDP-glucosyl transferase 84A2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 514 (186.0 bits), Expect = 2.5e-49, P = 2.5e-49
Identities = 146/487 (29%), Positives = 249/487 (51%)
Query: 9 ESESLNKTNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGS 68
E ES HV+LVSFP QGHV L++L LA + +TFVTTE ++++ S ++
Sbjct: 2 ELESSPPLPPHVMLVSFPGQGHVNPLLRLGKLLASKGLLITFVTTESWGKKMRISNKIQD 61
Query: 69 FSEMGDAQQLVRIVPLPDGLEPEDDRKDEAKMT--RS-ISKVMPGYLEELIQKINQQEED 125
+ +R DGL PEDD +T R + V ++ L+++ + +
Sbjct: 62 RVLKPVGKGYLRYDFFDDGL-PEDDEASRTNLTILRPHLELVGKREIKNLVKRYKEVTK- 119
Query: 126 EKITCVIADVTFGWALQVAAKLELKKASIYTSAPGILAM-------IMNIPKFIEAGI-I 177
+ +TC+I + W VA L++ A ++ + LA +++ P E I +
Sbjct: 120 QPVTCLINNPFVSWVCDVAEDLQIPCAVLWVQSCACLAAYYYYHHNLVDFPTKTEPEIDV 179
Query: 178 SSDGI-VIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILC 236
G+ ++K++ E+ ++ +SP + +L+ ++ I + +
Sbjct: 180 QISGMPLLKHD--EIPSFIHPSSP---------HSALREVIIDQIKRLHKTFSIFIDTFN 228
Query: 237 TWFHELAPSANKI-LPSII-PVGPLIANGQPTG------NFWSEDLTCLSWLDKQPPGSV 288
+ ++ + + LP +I P+GPL + N C+ WLD QP SV
Sbjct: 229 SLEKDIIDHMSTLSLPGVIRPLGPLYKMAKTVAYDVVKVNISEPTDPCMEWLDSQPVSSV 288
Query: 289 IYAAFGSISKLSQQQFNELALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKM 348
+Y +FG+++ L Q+Q +E+A G+ A FL +R + + + L +V GK+
Sbjct: 289 VYISFGTVAYLKQEQIDEIAYGVLNADVTFLWVIRQQELGFNKEKHV--LPEEVKGKGKI 346
Query: 349 VKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWP-WGHDHLYIKSCICDDWKI 407
V+W QEKVL+HPSVAC++THCGWNSTME +S GVP +C+P WG D + + D WK
Sbjct: 347 VEWCSQEKVLSHPSVACFVTHCGWNSTMEAVSSGVPTVCFPQWG-DQVTDAVYMIDVWKT 405
Query: 408 GLWLEPDD--NGIIGRHEIKRKVDELLSNDV---VRKNALKLKELAQKSVTKEGSSSKNL 462
G+ L + ++ R E+ ++ E+ + ++KNALK KE A+ +V + GSS +NL
Sbjct: 406 GVRLSRGEAEERLVPREEVAERLREVTKGEKAIELKKNALKWKEEAEAAVARGGSSDRNL 465
Query: 463 EYFIKQI 469
E F++++
Sbjct: 466 EKFVEKL 472
|
|
| TAIR|locus:2091628 AT3G22250 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 339 (124.4 bits), Expect = 3.7e-48, Sum P(2) = 3.7e-48
Identities = 82/229 (35%), Positives = 126/229 (55%)
Query: 251 PSIIPVGPLIANGQPTGN-------FWSEDLTCLSWLDKQPPGSVIYAAFGS-ISKLSQQ 302
P I+ +GPL N + T N FW ED++CL WL +Q P SVIY +FGS +S + +
Sbjct: 242 PQILHLGPL-HNQEATNNITITKTSFWEEDMSCLGWLQEQNPNSVIYISFGSWVSPIGES 300
Query: 303 QFNELALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVA---DFGKMVKWAPQEKVLA 359
LAL LE +G+PFL + + G P G V +V + G++V WAPQ +VL
Sbjct: 301 NIQTLALALEASGRPFLWALNRVWQEGL----PPGFVHRVTITKNQGRIVSWAPQLEVLR 356
Query: 360 HPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGII 419
+ SV CY+THCGWNSTME ++ LC+P D I D WKIG+ L +G
Sbjct: 357 NDSVGCYVTHCGWNSTMEAVASSRRLLCYPVAGDQFVNCKYIVDVWKIGVRL----SGF- 411
Query: 420 GRHEIKRKVDELLSNDVVRKNALKLKELAQKSVTKEGSSSKNLEY-FIK 467
G E++ + +++ + + + +L++L +++ E S + + F+K
Sbjct: 412 GEKEVEDGLRKVMEDQDMGE---RLRKLRDRAMGNEARLSSEMNFTFLK 457
|
|
| TAIR|locus:2046193 AT2G28080 "AT2G28080" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 498 (180.4 bits), Expect = 1.2e-47, P = 1.2e-47
Identities = 139/464 (29%), Positives = 228/464 (49%)
Query: 17 NVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQ 76
++H LL+ +P QGHV + LA +LA I VTFV T +I +I F+ +
Sbjct: 16 HLHALLIPYPFQGHVNPFVHLAIKLASQGITVTFVNTHYIHHQITNGSDGDIFAGVRSES 75
Query: 77 QL-VRIVPLPDGLEPEDDRK-DEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIAD 134
L +R + DGL DR + S+ V ++EEL+ + D + +IAD
Sbjct: 76 GLDIRYATVSDGLPVGFDRSLNHDTYQSSLLHVFYAHVEELVASL--VGGDGGVNVMIAD 133
Query: 135 VTFGWALQVAAKLELKKASIYTSAPGILAMIMNIPKFIEAGIISSDGIVIKNEKIELSPY 194
F W VA K L S +T A + ++ ++ G + +++ I+ P
Sbjct: 134 TFFVWPSVVARKFGLVCVSFWTEAALVFSLYYHMDLLRIHGHFGAQET--RSDLIDYIPG 191
Query: 195 LPAASP---AEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSANKILP 251
+ A +P A +L + + ++F+ ++++ D +LC + K L
Sbjct: 192 VAAINPKDTASYLQETDTSSVVHQIIFKAF----EDVKKVDFVLCNTIQQFEDKTIKALN 247
Query: 252 SIIP---VGPLIANGQPTGN----FWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQF 304
+ IP +GP+I TG+ WSE C WL+ +P SV+Y +FGS + ++++
Sbjct: 248 TKIPFYAIGPIIPFNNQTGSVTTSLWSES-DCTQWLNTKPKSSVLYISFGSYAHVTKKDL 306
Query: 305 NELALGLELAGQPFLCGVRPGFINGSSTNN-PDGLVAKVADFGKMVKWAPQEKVLAHPSV 363
E+A G+ L+ F+ VRP ++ TN P+G + D G ++ W Q VL+H SV
Sbjct: 307 VEIAHGILLSKVNFVWVVRPDIVSSDETNPLPEGFETEAGDRGIVIPWCCQMTVLSHESV 366
Query: 364 ACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHE 423
+LTHCGWNS +E I VP LC+P D + + + DDW+IG+ L +D GR E
Sbjct: 367 GGFLTHCGWNSILETIWCEVPVLCFPLLTDQVTNRKLVVDDWEIGINL-CEDKSDFGRDE 425
Query: 424 IKRKVDELLSNDVVRKNALKLKELAQKSVTKEGSSSK-NLEYFI 466
+ R ++ L+ V ++ ++K + +V GSSS+ NL FI
Sbjct: 426 VGRNINRLMCG-VSKEKIGRVKMSLEGAVRNSGSSSEMNLGLFI 468
|
|
| TAIR|locus:2045238 UGT74D1 "UDP-glucosyl transferase 74D1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 489 (177.2 bits), Expect = 1.1e-46, P = 1.1e-46
Identities = 143/477 (29%), Positives = 230/477 (48%)
Query: 15 KTNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGD 74
K +VL+ SFP QGH+ L++ + RL + VTF+TT I G + +
Sbjct: 4 KAKANVLVFSFPIQGHINPLLQFSKRLLSKNVNVTFLTTSSTHNSILRRAITGGATALP- 62
Query: 75 AQQLVRIVPLPDGLE---PEDDRKDE--AKMTRSISKVMPGYLEELIQKINQQEEDEKIT 129
+ VP+ DG E P D + AK ++S+ L ELI + D K
Sbjct: 63 ----LSFVPIDDGFEEDHPSTDTSPDYFAKFQENVSRS----LSELISSM-----DPKPN 109
Query: 130 CVIADVTFGWALQVAAKLE-LKKASIYTSAPGILAMIMNIPKFIEAGIISSDGIVIKNEK 188
V+ D + L V K + AS +T + + A ++ F+ V+
Sbjct: 110 AVVYDSCLPYVLDVCRKHPGVAAASFFTQSSTVNATYIH---FLRGEFKEFQNDVV---- 162
Query: 189 IELSPYLPAASPAEFLW-NCPGNPSLQTLMFQYINVIRQN---IEASDRI---LCTWFHE 241
+ P L FL+ N P + + Q++NV + + + D + + W
Sbjct: 163 LPAMPPLKGNDLPVFLYDNNLCRPLFELISSQFVNVDDIDFFLVNSFDELEVEVLQWMKN 222
Query: 242 LAPSAN--KILPSIIPVGPLIANGQPTG-NFWSEDLT-CLSWLDKQPPGSVIYAAFGSIS 297
P N ++PS+ + +A + G N ++ + CL WLD +PPGSVIY +FGS++
Sbjct: 223 QWPVKNIGPMIPSMY-LDKRLAGDKDYGINLFNAQVNECLDWLDSKPPGSVIYVSFGSLA 281
Query: 298 KLSQQQFNELALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKV 357
L Q E+A GL+ G FL VR + P + + D G +V W+PQ +V
Sbjct: 282 VLKDDQMIEVAAGLKQTGHNFLWVVR----ETETKKLPSNYIEDICDKGLIVNWSPQLQV 337
Query: 358 LAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNG 417
LAH S+ C++THCGWNST+E +S+GV + P D I D WK+G+ ++ D NG
Sbjct: 338 LAHKSIGCFMTHCGWNSTLEALSLGVALIGMPAYSDQPTNAKFIEDVWKVGVRVKADQNG 397
Query: 418 IIGRHEIKRKVDELLSN-----DVVRKNALKLKELAQKSVTKEGSSSKNLEYFIKQI 469
+ + EI R V E++ + +RKNA +L E A+++++ G+S KN++ F+ +I
Sbjct: 398 FVPKEEIVRCVGEVMEDMSEKGKEIRKNARRLMEFAREALSDGGNSDKNIDEFVAKI 454
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9SGA8 | U83A1_ARATH | 2, ., 4, ., 1, ., - | 0.3882 | 0.9278 | 0.9418 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.4.1 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 471 | |||
| PLN02555 | 480 | PLN02555, PLN02555, limonoid glucosyltransferase | 4e-73 | |
| PLN02562 | 448 | PLN02562, PLN02562, UDP-glycosyltransferase | 1e-68 | |
| PLN02448 | 459 | PLN02448, PLN02448, UDP-glycosyltransferase family | 5e-59 | |
| PLN02410 | 451 | PLN02410, PLN02410, UDP-glucoronosyl/UDP-glucosyl | 1e-50 | |
| PLN02173 | 449 | PLN02173, PLN02173, UDP-glucosyl transferase famil | 2e-50 | |
| PLN02210 | 456 | PLN02210, PLN02210, UDP-glucosyl transferase | 3e-48 | |
| PLN02152 | 455 | PLN02152, PLN02152, indole-3-acetate beta-glucosyl | 4e-47 | |
| PLN03007 | 482 | PLN03007, PLN03007, UDP-glucosyltransferase family | 1e-42 | |
| PLN03004 | 451 | PLN03004, PLN03004, UDP-glycosyltransferase | 3e-42 | |
| PLN02863 | 477 | PLN02863, PLN02863, UDP-glucoronosyl/UDP-glucosyl | 8e-38 | |
| PLN02534 | 491 | PLN02534, PLN02534, UDP-glycosyltransferase | 1e-37 | |
| PLN02992 | 481 | PLN02992, PLN02992, coniferyl-alcohol glucosyltran | 4e-37 | |
| PLN02167 | 475 | PLN02167, PLN02167, UDP-glycosyltransferase family | 1e-35 | |
| PLN02207 | 468 | PLN02207, PLN02207, UDP-glycosyltransferase | 9e-35 | |
| PLN02554 | 481 | PLN02554, PLN02554, UDP-glycosyltransferase family | 1e-33 | |
| PLN03015 | 470 | PLN03015, PLN03015, UDP-glucosyl transferase | 1e-29 | |
| PLN00164 | 480 | PLN00164, PLN00164, glucosyltransferase; Provision | 4e-29 | |
| PLN02670 | 472 | PLN02670, PLN02670, transferase, transferring glyc | 2e-24 | |
| PLN00414 | 446 | PLN00414, PLN00414, glycosyltransferase family pro | 3e-21 | |
| pfam00201 | 500 | pfam00201, UDPGT, UDP-glucoronosyl and UDP-glucosy | 3e-20 | |
| PLN02764 | 453 | PLN02764, PLN02764, glycosyltransferase family pro | 3e-20 | |
| cd03784 | 401 | cd03784, GT1_Gtf_like, This family includes the Gt | 5e-20 | |
| PLN02208 | 442 | PLN02208, PLN02208, glycosyltransferase family pro | 1e-19 | |
| TIGR01426 | 392 | TIGR01426, MGT, glycosyltransferase, MGT family | 3e-11 | |
| COG1819 | 406 | COG1819, COG1819, Glycosyl transferases, related t | 7e-10 | |
| PHA03392 | 507 | PHA03392, egt, ecdysteroid UDP-glucosyltransferase | 0.001 |
| >gnl|CDD|178170 PLN02555, PLN02555, limonoid glucosyltransferase | Back alignment and domain information |
|---|
Score = 238 bits (608), Expect = 4e-73
Identities = 152/481 (31%), Positives = 240/481 (49%), Gaps = 50/481 (10%)
Query: 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQL--GSFSEMGDA 75
VHV+LVSFP QGHV L++L LA + VTFVTTE ++++++ ++ G +GD
Sbjct: 8 VHVMLVSFPGQGHVNPLLRLGKLLASKGLLVTFVTTESWGKKMRQANKIQDGVLKPVGDG 67
Query: 76 QQLVRIVPLPDGL-EPEDDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIAD 134
+R DG E + R+D + V + L+++ E+ ++C+I +
Sbjct: 68 --FIRFEFFEDGWAEDDPRRQDLDLYLPQLELVGKREIPNLVKRYA--EQGRPVSCLINN 123
Query: 135 VTFGWALQVAAKLELKKASIYTSAPGILAM-------IMNIPKFIEAGIISSDGIVIKNE 187
W VA +L + A ++ + + ++ P E I +
Sbjct: 124 PFIPWVCDVAEELGIPSAVLWVQSCACFSAYYHYYHGLVPFPTETEPEI---------DV 174
Query: 188 KIELSPYLPAASPAEFLWNCPGNPSL-QTLMFQYINVIRQNIEASDRILCTWFHELAPSA 246
++ P L FL P L + ++ QY +N++ IL F EL
Sbjct: 175 QLPCMPLLKYDEIPSFLHPSSPYPFLRRAILGQY-----KNLDKPFCILIDTFQELEKEI 229
Query: 247 ----NKILPSIIPVGPLIANGQP-----TGNFWSEDLTCLSWLDKQPPGSVIYAAFGSIS 297
+K+ P I PVGPL + G+ C+ WLD +PP SV+Y +FG++
Sbjct: 230 IDYMSKLCP-IKPVGPLFKMAKTPNSDVKGDISKPADDCIEWLDSKPPSSVVYISFGTVV 288
Query: 298 KLSQQQFNELALGLELAGQPFLCGVRPGFINGSSTNN---PDGLVAKVADFGKMVKWAPQ 354
L Q+Q +E+A G+ +G FL +RP S P+ + K D GK+V+W PQ
Sbjct: 289 YLKQEQIDEIAYGVLNSGVSFLWVMRPP-HKDSGVEPHVLPEEFLEKAGDKGKIVQWCPQ 347
Query: 355 EKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWP-WGHDHLYIKSCICDDWKIGLWL-- 411
EKVLAHPSVAC++THCGWNSTME +S GVP +C+P WG D + + D +K G+ L
Sbjct: 348 EKVLAHPSVACFVTHCGWNSTMEALSSGVPVVCFPQWG-DQVTDAVYLVDVFKTGVRLCR 406
Query: 412 EPDDNGIIGRHEIKRKVDELLSNDV---VRKNALKLKELAQKSVTKEGSSSKNLEYFIKQ 468
+N +I R E+ + E + +++NALK KE A+ +V + GSS +N + F+ +
Sbjct: 407 GEAENKLITREEVAECLLEATVGEKAAELKQNALKWKEEAEAAVAEGGSSDRNFQEFVDK 466
Query: 469 I 469
+
Sbjct: 467 L 467
|
Length = 480 |
| >gnl|CDD|215305 PLN02562, PLN02562, UDP-glycosyltransferase | Back alignment and domain information |
|---|
Score = 225 bits (575), Expect = 1e-68
Identities = 139/427 (32%), Positives = 210/427 (49%), Gaps = 39/427 (9%)
Query: 20 VLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLV 79
++LV +PAQGHV ++KLA + +T EFI RI S D + +
Sbjct: 9 IILVPYPAQGHVTPMLKLASAFLSRGFEPVVITPEFIHRRI---------SATLDPKLGI 59
Query: 80 RIVPLPDGLEPEDDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGW 139
+ + DG + +D +D + S+ MP LE L+ K+ +ED ++ C++ D+ W
Sbjct: 60 TFMSISDGQD-DDPPRDFFSIENSMENTMPPQLERLLHKL---DEDGEVACMVVDLLASW 115
Query: 140 ALQVAAKLELKKASIYTSAPGILAMIMNIPKFIEAGIISSDGIVIKNEKIELSPYLPAAS 199
A+ VA + + A + +I IP+ + G+IS G + EKI + P P S
Sbjct: 116 AIGVADRCGVPVAGFWPVMLAAYRLIQAIPELVRTGLISETGCPRQLEKICVLPEQPLLS 175
Query: 200 PAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWF----------HELAPSANKI 249
+ W G P + F++ + ++ IL F H+ + + +
Sbjct: 176 TEDLPW-LIGTPKARKARFKFWTRTLERTKSLRWILMNSFKDEEYDDVKNHQASYNNGQ- 233
Query: 250 LPSIIPVGPLIANGQPT---GNFWSEDLTCLSWLDKQPPGSVIYAAFGS-ISKLSQQQFN 305
P I+ +GPL T +FW ED++CL WL +Q P SVIY +FGS +S + +
Sbjct: 234 NPQILQIGPLHNQEATTITKPSFWEEDMSCLGWLQEQKPNSVIYISFGSWVSPIGESNVR 293
Query: 306 ELALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVAC 365
LAL LE +G+PF+ + P + G P G V +V+ GK+V WAPQ +VL H +V C
Sbjct: 294 TLALALEASGRPFIWVLNPVWREGL----PPGYVERVSKQGKVVSWAPQLEVLKHQAVGC 349
Query: 366 YLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRH--E 423
YLTHCGWNSTME I LC+P D + I D WKIG+ + +G + E
Sbjct: 350 YLTHCGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRI----SGFGQKEVEE 405
Query: 424 IKRKVDE 430
RKV E
Sbjct: 406 GLRKVME 412
|
Length = 448 |
| >gnl|CDD|215247 PLN02448, PLN02448, UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Score = 200 bits (511), Expect = 5e-59
Identities = 133/494 (26%), Positives = 211/494 (42%), Gaps = 83/494 (16%)
Query: 16 TNVHVLLVSFPAQGHVASLMKLAHRLA--DCRIKVTFVTTE----FICERIKESRQLGSF 69
T+ HV+ + +P +GH+ +M L LA I +TFV TE I K
Sbjct: 9 TSCHVVAMPYPGRGHINPMMNLCKLLASRKPDILITFVVTEEWLGLIGSDPKPDN----- 63
Query: 70 SEMGDAQQLVRIVPLPDGLEPEDDR-KD-----EAKMTRSISKVMPGYLEELIQKINQQE 123
+R +P+ + E R D EA MT+ M E+L+ ++
Sbjct: 64 ---------IRFATIPNVIPSELVRAADFPGFLEAVMTK-----MEAPFEQLLDRLEPP- 108
Query: 124 EDEKITCVIADVTFGWALQVAAKLELKKASIYTSAPGILAMIMNIPKFIEAGIISSDGIV 183
+T ++AD WA+ V + + AS++T + ++ + + G +
Sbjct: 109 ----VTAIVADTYLFWAVGVGNRRNIPVASLWTMSATFFSVFYHFDLLPQNGHFPVELSE 164
Query: 184 IKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNI-EASDRI------LC 236
E+++ Y+P S L + + + I EA + L
Sbjct: 165 SGEERVD---YIPGLSSTRLS-------DLPPIFHGNSRRVLKRILEAFSWVPKAQYLLF 214
Query: 237 TWFHELAPSANKILPS-----IIPVGPLIA-------NGQPTGNFWSEDLTCLSWLDKQP 284
T F+EL A L S + P+GP I + + WLD QP
Sbjct: 215 TSFYELEAQAIDALKSKFPFPVYPIGPSIPYMELKDNSSSSNNE--DNEPDYFQWLDSQP 272
Query: 285 PGSVIYAAFGSISKLSQQQFNELALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVAD 344
GSV+Y + GS +S Q +E+A GL +G FL R G ++ + D
Sbjct: 273 EGSVLYVSLGSFLSVSSAQMDEIAAGLRDSGVRFLWVAR-----GEASRLKEIC----GD 323
Query: 345 FGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDD 404
G +V W Q KVL H SV + THCGWNST+E + GVP L +P D I +D
Sbjct: 324 MGLVVPWCDQLKVLCHSSVGGFWTHCGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVED 383
Query: 405 WKIGLWLEP--DDNGIIGRHEIKRKVDELL---SNDV--VRKNALKLKELAQKSVTKEGS 457
WKIG ++ + ++GR EI V + S + +R+ A +L+E+ + ++ K GS
Sbjct: 384 WKIGWRVKREVGEETLVGREEIAELVKRFMDLESEEGKEMRRRAKELQEICRGAIAKGGS 443
Query: 458 SSKNLEYFIKQITE 471
S NL+ FI+ I++
Sbjct: 444 SDTNLDAFIRDISQ 457
|
Length = 459 |
| >gnl|CDD|178032 PLN02410, PLN02410, UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Score = 178 bits (452), Expect = 1e-50
Identities = 131/460 (28%), Positives = 217/460 (47%), Gaps = 37/460 (8%)
Query: 20 VLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLV 79
V+LV PAQGH++ +M+LA L +T T+F FS D
Sbjct: 10 VVLVPVPAQGHISPMMQLAKTLHLKGFSITIAQTKF-----------NYFSPSDDFTDF- 57
Query: 80 RIVPLPDGLEPEDDRKD--EAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTF 137
+ V +P+ L PE D K+ + ++K ++ + ++ Q+ +E I CV+ D
Sbjct: 58 QFVTIPESL-PESDFKNLGPIEFLHKLNKECQVSFKDCLGQLVLQQGNE-IACVVYDEFM 115
Query: 138 GWALQVAAKLELKKASIYTSAPGILAMIMNIPKFIEAGIISSDGIVIKNEKIELSPYLPA 197
+A A + +L T++ K +++ +K K + + +P
Sbjct: 116 YFAEAAAKEFKLPNVIFSTTSATAFVCRSVFDKLYANNVLAP----LKEPKGQQNELVPE 171
Query: 198 ASPAEFLWNCPGNP-----SLQTLMFQYINVIRQNIEAS---DRILCTWFHELAPSANKI 249
P C P SL+++M Y N + + +S + C L+ ++
Sbjct: 172 FHPLR----CKDFPVSHWASLESIMELYRNTVDKRTASSVIINTASCLESSSLSRLQQQL 227
Query: 250 LPSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELAL 309
+ P+GPL + E+ +C+ WL+KQ SVI+ + GS++ + + E A
Sbjct: 228 QIPVYPIGPLHLVASAPTSLLEENKSCIEWLNKQKKNSVIFVSLGSLALMEINEVMETAS 287
Query: 310 GLELAGQPFLCGVRPGFINGSS--TNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYL 367
GL+ + Q FL +RPG + GS + P ++ G +VKWAPQ++VL+HP+V +
Sbjct: 288 GLDSSNQQFLWVIRPGSVRGSEWIESLPKEFSKIISGRGYIVKWAPQKEVLSHPAVGGFW 347
Query: 368 THCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPD-DNGIIGRHEIKR 426
+HCGWNST+E I GVP +C P+ D + WKIG+ +E D D G + R +
Sbjct: 348 SHCGWNSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVEGDLDRGAVERAVKRL 407
Query: 427 KVDELLSNDVVRKNALKLKELAQKSVTKEGSSSKNLEYFI 466
V+E + +RK A+ LKE + SV GSS +LE F+
Sbjct: 408 MVEE--EGEEMRKRAISLKEQLRASVISGGSSHNSLEEFV 445
|
Length = 451 |
| >gnl|CDD|177830 PLN02173, PLN02173, UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Score = 177 bits (450), Expect = 2e-50
Identities = 139/489 (28%), Positives = 229/489 (46%), Gaps = 75/489 (15%)
Query: 13 LNKTNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEM 72
+ K HVL V FP+QGH+ + + RL K T T FI I
Sbjct: 1 MEKMRGHVLAVPFPSQGHITPIRQFCKRLHSKGFKTTHTLTTFIFNTIHL---------- 50
Query: 73 GDAQQLVRIVPLPDGLEPEDDRKDEAKMTRSISKVMPGYLE-----------ELIQKINQ 121
D + I + DG D+ + + S +P YL+ ++I+K
Sbjct: 51 -DPSSPISIATISDGY-------DQGGFSSAGS--VPEYLQNFKTFGSKTVADIIRK--H 98
Query: 122 QEEDEKITCVIADVTFGWALQVAAKLELKKASIYTSAPGILAMIMNIPKFIEAGIISSDG 181
Q D ITC++ D WAL +A + L A +T + + +N +I G ++
Sbjct: 99 QSTDNPITCIVYDSFMPWALDLAREFGLAAAPFFTQSCAV--NYINYLSYINNGSLTL-- 154
Query: 182 IVIKNEKIELSPYLPAASPAEFLWNCPGNPS-LQTLMFQYINVIRQNIEASDRILCTWFH 240
I+ P L F+ + + + ++ Q+ N + +D +L FH
Sbjct: 155 ------PIKDLPLLELQDLPTFVTPTGSHLAYFEMVLQQFTN-----FDKADFVLVNSFH 203
Query: 241 ELAPSANKILPSIIPV---GPLIA-----------NGQPTGNFWS-EDLTCLSWLDKQPP 285
+L N++L + PV GP + N F E C WLDK+P
Sbjct: 204 DLDLHENELLSKVCPVLTIGPTVPSMYLDQQIKSDNDYDLNLFDLKEAALCTDWLDKRPQ 263
Query: 286 GSVIYAAFGSISKLSQQQFNELALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAKV-AD 344
GSV+Y AFGS++KLS +Q E+A + + +L VR + P G + V D
Sbjct: 264 GSVVYIAFGSMAKLSSEQMEEIASAI--SNFSYLWVVR----ASEESKLPPGFLETVDKD 317
Query: 345 FGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDD 404
++KW+PQ +VL++ ++ C++THCGWNSTMEG+S+GVP + P D I D
Sbjct: 318 KSLVLKWSPQLQVLSNKAIGCFMTHCGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDV 377
Query: 405 WKIGLWLEPD-DNGIIGRHEIKRKVDELLSNDV---VRKNALKLKELAQKSVTKEGSSSK 460
WK+G+ ++ + ++GI R EI+ + E++ + +++NA K ++LA KS+++ GS+
Sbjct: 378 WKVGVRVKAEKESGIAKREEIEFSIKEVMEGEKSKEMKENAGKWRDLAVKSLSEGGSTDI 437
Query: 461 NLEYFIKQI 469
N+ F+ +I
Sbjct: 438 NINTFVSKI 446
|
Length = 449 |
| >gnl|CDD|215127 PLN02210, PLN02210, UDP-glucosyl transferase | Back alignment and domain information |
|---|
Score = 171 bits (435), Expect = 3e-48
Identities = 135/481 (28%), Positives = 232/481 (48%), Gaps = 65/481 (13%)
Query: 19 HVLLVSFPAQGHVASLMKLAH--RLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQ 76
HVL+V+ QGH+ ++KLA L+ + T TTE ++R L S E +
Sbjct: 10 HVLMVTLAFQGHINPMLKLAKHLSLSSKNLHFTLATTE-------QARDLLSTVE--KPR 60
Query: 77 QLVRIVPLPDGLEPEDDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVT 136
+ V +V DGL P+DD + + +S++KV L ++I E+++ +C+I+
Sbjct: 61 RPVDLVFFSDGL-PKDDPRAPETLLKSLNKVGAKNLSKII-------EEKRYSCIISSPF 112
Query: 137 FGWALQVAAKLELKKASIYTSAPGILAMI----MNIPKFIEAGIISSDGIVIKNEKIELS 192
W VAA + A ++ A G ++ M F + + N+ +EL
Sbjct: 113 TPWVPAVAAAHNIPCAILWIQACGAYSVYYRYYMKTNSFPDLEDL--------NQTVEL- 163
Query: 193 PYLPAAS----PAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPS--- 245
P LP P+ L + G LM ++ + +R +L F+EL
Sbjct: 164 PALPLLEVRDLPSFMLPS--GGAHFNNLMAEFADCLRY----VKWVLVNSFYELESEIIE 217
Query: 246 ANKILPSIIPVGPLIA-----NGQPTG------NFWSEDLTCLSWLDKQPPGSVIYAAFG 294
+ L +IP+GPL++ + + + D C+ WLDKQ SV+Y +FG
Sbjct: 218 SMADLKPVIPIGPLVSPFLLGDDEEETLDGKNLDMCKSDDCCMEWLDKQARSSVVYISFG 277
Query: 295 SISKLSQQQFNELALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADF-GKMVKWAP 353
S+ + + Q +A L+ G PFL +RP N L V + G +++W+P
Sbjct: 278 SMLESLENQVETIAKALKNRGVPFLWVIRPK----EKAQNVQVLQEMVKEGQGVVLEWSP 333
Query: 354 QEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEP 413
QEK+L+H +++C++THCGWNST+E + GVP + +P D + D + IG+ +
Sbjct: 334 QEKILSHMAISCFVTHCGWNSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRN 393
Query: 414 DD-NGIIGRHEIKRKVDELLSNDV---VRKNALKLKELAQKSVTKEGSSSKNLEYFIKQI 469
D +G + E++R ++ + +R+ A +LK +A+ ++ GSS++NL+ FI I
Sbjct: 394 DAVDGELKVEEVERCIEAVTEGPAAADIRRRAAELKHVARLALAPGGSSARNLDLFISDI 453
Query: 470 T 470
T
Sbjct: 454 T 454
|
Length = 456 |
| >gnl|CDD|177813 PLN02152, PLN02152, indole-3-acetate beta-glucosyltransferase | Back alignment and domain information |
|---|
Score = 168 bits (427), Expect = 4e-47
Identities = 132/479 (27%), Positives = 215/479 (44%), Gaps = 57/479 (11%)
Query: 19 HVLLVSFPAQGHVASLMKLAHRLADCR-IKVTFVTTEFICERIKESRQLGSFSEMGDAQQ 77
H LLV+FPAQGHV ++ A RL +VTF T C + + + + + +
Sbjct: 5 HFLLVTFPAQGHVNPSLRFARRLIKTTGTRVTFAT----CLSVIHRSMIPNHNNVENLSF 60
Query: 78 LVRIVPLPDGL--EPEDDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADV 135
L DG+ +D + R+ K + ++E D +TC+I +
Sbjct: 61 LTFSDGFDDGVISNTDDVQNRLVNFERNGDKALSDFIEA------NLNGDSPVTCLIYTI 114
Query: 136 TFGWALQVAAKLELKKASIYTSAPGILAMIMNIPKFIEAGIISSDGIVIKNEKIELS--P 193
WA +VA + L ++ A + +I G N E P
Sbjct: 115 LPNWAPKVARRFHLPSVLLWIQP----AFVFDIYYNYSTG---------NNSVFEFPNLP 161
Query: 194 YLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSANKILPSI 253
L FL N + Q + + + +++ E++ +IL F L P +P+I
Sbjct: 162 SLEIRDLPSFLSPSNTNKAAQAVYQELMEFLKE--ESNPKILVNTFDSLEPEFLTAIPNI 219
Query: 254 --IPVGPL----IANGQPTGNFWSEDLTCLS---WLDKQPPGSVIYAAFGSISKLSQQQF 304
+ VGPL I G +G S S WLD + SVIY +FG++ +LS++Q
Sbjct: 220 EMVAVGPLLPAEIFTGSESGKDLSVRDQSSSYTLWLDSKTESSVIYVSFGTMVELSKKQI 279
Query: 305 NELALGLELAGQPFLCGV-----RPGFINGSSTNNPDGLVAKVADF-------GKMVKWA 352
ELA L +PFL + R I G + K+A F G +V W
Sbjct: 280 EELARALIEGKRPFLWVITDKLNREAKIEGEEETE----IEKIAGFRHELEEVGMIVSWC 335
Query: 353 PQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLE 412
Q +VL H +V C++THCGW+S++E + +GVP + +P D + + WK G+ +
Sbjct: 336 SQIEVLRHRAVGCFVTHCGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVR 395
Query: 413 PDDNGIIGRHEIKRKVDELLSNDVV--RKNALKLKELAQKSVTKEGSSSKNLEYFIKQI 469
+ G++ R EI+R ++ ++ V R++A K K LA ++ + GSS KN+E F+K +
Sbjct: 396 ENSEGLVERGEIRRCLEAVMEEKSVELRESAEKWKRLAIEAGGEGGSSDKNVEAFVKTL 454
|
Length = 455 |
| >gnl|CDD|178584 PLN03007, PLN03007, UDP-glucosyltransferase family protein | Back alignment and domain information |
|---|
Score = 156 bits (397), Expect = 1e-42
Identities = 129/517 (24%), Positives = 220/517 (42%), Gaps = 99/517 (19%)
Query: 14 NKTNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEF---ICER-IKESRQLGSF 69
N +H+L F A GH+ + +A + K T +TT I E+ I+ + L
Sbjct: 2 NHEKLHILFFPFMAHGHMIPTLDMAKLFSSRGAKSTILTTPLNAKIFEKPIEAFKNLNPG 61
Query: 70 SEMGDAQQLVRI-------VPLPDGLE--------PEDDRKDEAKMTRSISKVMPGYLEE 114
E+ ++I + LP+G E DD D +K LE+
Sbjct: 62 LEID-----IQIFNFPCVELGLPEGCENVDFITSNNNDDSGDLFLKFLFSTKYFKDQLEK 116
Query: 115 LIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKASIYTSAPGILAMIMNIPKFIEA 174
L+ E + C++AD+ F WA + A K +P+ +
Sbjct: 117 LL-------ETTRPDCLVADMFFPWATEAAEKF-------------------GVPRLVFH 150
Query: 175 G-----IISSDGI-VIKNEKIELSPYLPAASPAEFLWNCPGNPSL----------QTLMF 218
G + +S I V K +K S P P + PG+ + ++ M
Sbjct: 151 GTGYFSLCASYCIRVHKPQKKVASSSEPFVIP-----DLPGDIVITEEQINDADEESPMG 205
Query: 219 QYINVIRQNIEASDRILCTWFHELAPSANKILPSIIP-----VGPL------IANGQPTG 267
+++ +R++ S +L F+EL + S + +GPL G
Sbjct: 206 KFMKEVRESEVKSFGVLVNSFYELESAYADFYKSFVAKRAWHIGPLSLYNRGFEEKAERG 265
Query: 268 NFWSED-LTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELAGQPFLCGVRPGF 326
+ D CL WLD + P SVIY +FGS++ +Q E+A GLE +GQ F+ VR
Sbjct: 266 KKANIDEQECLKWLDSKKPDSVIYLSFGSVASFKNEQLFEIAAGLEGSGQNFIWVVRK-- 323
Query: 327 INGSSTNN----PDGLVAKVADFGKMVK-WAPQEKVLAHPSVACYLTHCGWNSTMEGISM 381
N + P+G + G +++ WAPQ +L H + ++THCGWNS +EG++
Sbjct: 324 -NENQGEKEEWLPEGFEERTKGKGLIIRGWAPQVLILDHQATGGFVTHCGWNSLLEGVAA 382
Query: 382 GVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDN-----GIIGRHEIKRKVDELLSNDV 436
G+P + WP G + Y + + + G+ + I R ++++ V E++ +
Sbjct: 383 GLPMVTWPVGAEQFYNEKLVTQVLRTGVSVGAKKLVKVKGDFISREKVEKAVREVIVGEE 442
Query: 437 V---RKNALKLKELAQKSVTKEGSSSKNLEYFIKQIT 470
R A KL E+A+ +V + GSS +L F++++
Sbjct: 443 AEERRLRAKKLAEMAKAAVEEGGSSFNDLNKFMEELN 479
|
Length = 482 |
| >gnl|CDD|178581 PLN03004, PLN03004, UDP-glycosyltransferase | Back alignment and domain information |
|---|
Score = 155 bits (393), Expect = 3e-42
Identities = 77/216 (35%), Positives = 128/216 (59%), Gaps = 6/216 (2%)
Query: 250 LPSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELAL 309
+I P+GPLI NG+ ++ ++CL+WLD QP SV++ FGS+ S++Q E+A+
Sbjct: 234 FRNIYPIGPLIVNGRIEDRNDNKAVSCLNWLDSQPEKSVVFLCFGSLGLFSKEQVIEIAV 293
Query: 310 GLELAGQPFLCGVR-PGFINGSSTNN----PDGLVAKVADFGKMVK-WAPQEKVLAHPSV 363
GLE +GQ FL VR P + + + P+G +++ D G +VK WAPQ VL H +V
Sbjct: 294 GLEKSGQRFLWVVRNPPELEKTELDLKSLLPEGFLSRTEDKGMVVKSWAPQVPVLNHKAV 353
Query: 364 ACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHE 423
++THCGWNS +E + GVP + WP + + + I D+ KI + + + G + E
Sbjct: 354 GGFVTHCGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISMNESETGFVSSTE 413
Query: 424 IKRKVDELLSNDVVRKNALKLKELAQKSVTKEGSSS 459
++++V E++ VR+ + +K A+ ++T+ GSS
Sbjct: 414 VEKRVQEIIGECPVRERTMAMKNAAELALTETGSSH 449
|
Length = 451 |
| >gnl|CDD|215465 PLN02863, PLN02863, UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Score = 143 bits (362), Expect = 8e-38
Identities = 137/503 (27%), Positives = 225/503 (44%), Gaps = 75/503 (14%)
Query: 11 ESLNK-TNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSF 69
LNK HVL+ FPAQGH+ L+ L HRLA + +T + T + L
Sbjct: 2 TELNKPAGTHVLVFPFPAQGHMIPLLDLTHRLALRGLTITVLVT---------PKNLPFL 52
Query: 70 SEMGDAQQLVR--IVP------LPDGLEPEDDRKDEAKMTRSISKVMPGYLEELIQKINQ 121
+ + + ++P +P G+E D + S +M L EL +
Sbjct: 53 NPLLSKHPSIETLVLPFPSHPSIPSGVENVKD------LPPSGFPLMIHALGELYAPLLS 106
Query: 122 --QEEDEKITCVIADVTFGWALQVAAKLELKKASIYTSAPGILAMIMNIPKFIEAGIISS 179
+ +I+D+ GW +A +L +++ S L+++ ++ + + I
Sbjct: 107 WFRSHPSPPVAIISDMFLGWTQNLACQLGIRRFVFSPSGAMALSIMYSLWREMPTKINPD 166
Query: 180 DGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQ--TLMFQYI----------NVIRQN 227
D +NE + S +P NCP P Q +L Y+ + R N
Sbjct: 167 D----QNEILSFSK-IP---------NCPKYPWWQISSLYRSYVEGDPAWEFIKDSFRAN 212
Query: 228 IEASDRILCTWFHELAPSANKILPS------IIPVGPLIA----------NGQPTGNFWS 271
I AS ++ F EL + L + VGP++ G P+ +
Sbjct: 213 I-ASWGLVVNSFTELEGIYLEHLKKELGHDRVWAVGPILPLSGEKSGLMERGGPS-SVSV 270
Query: 272 EDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELAGQPFLCGVR-PGFINGS 330
+D+ ++WLD V+Y FGS L+++Q LA GLE +G F+ V+ P
Sbjct: 271 DDV--MTWLDTCEDHKVVYVCFGSQVVLTKEQMEALASGLEKSGVHFIWCVKEPVNEESD 328
Query: 331 STNNPDGLVAKVADFGKMVK-WAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWP 389
+N P G +VA G +++ WAPQ +L+H +V +LTHCGWNS +EG+ GVP L WP
Sbjct: 329 YSNIPSGFEDRVAGRGLVIRGWAPQVAILSHRAVGAFLTHCGWNSVLEGLVAGVPMLAWP 388
Query: 390 WGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLS-NDVVRKNALKLKELA 448
D S + D+ K+ + + + + E+ R E +S N V R+ A +L+ A
Sbjct: 389 MAADQFVNASLLVDELKVAVRVCEGADTVPDSDELARVFMESVSENQVERERAKELRRAA 448
Query: 449 QKSVTKEGSSSKNLEYFIKQITE 471
++ + GSS K+L+ F+K + E
Sbjct: 449 LDAIKERGSSVKDLDGFVKHVVE 471
|
Length = 477 |
| >gnl|CDD|215293 PLN02534, PLN02534, UDP-glycosyltransferase | Back alignment and domain information |
|---|
Score = 143 bits (362), Expect = 1e-37
Identities = 133/509 (26%), Positives = 227/509 (44%), Gaps = 88/509 (17%)
Query: 19 HVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQL 78
H +L+ AQGH+ ++ +A LA+ + V+ VTT R ++ + E G +L
Sbjct: 10 HFVLIPLMAQGHMIPMIDMARLLAERGVIVSLVTTPQNASRF--AKTIDRARESGLPIRL 67
Query: 79 VRI------VPLPDGLEPEDDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVI 132
V+I V LP G E D + + V L++ +++ +Q +C+I
Sbjct: 68 VQIPFPCKEVGLPIGCENLDTLPSRDLLRKFYDAV--DKLQQPLERFLEQA-KPPPSCII 124
Query: 133 ADVTFGWALQVAAKLELKKASIYTSAPGILAMIMNIPKFIEAG-----IISSDGIVIKNE 187
+D W + A + NIP+ + G ++SS I + N
Sbjct: 125 SDKCLSWTSKTAQRF-------------------NIPRIVFHGMCCFSLLSSHNIRLHN- 164
Query: 188 KIELSPYLPAASPAE-FLWNCPGNP-SLQTLMFQY---------INVIRQNIEASDR--- 233
+L +S +E F+ PG P S++ Q ++ +R + ++
Sbjct: 165 -----AHLSVSSDSEPFV--VPGMPQSIEITRAQLPGAFVSLPDLDDVRNKMREAESTAF 217
Query: 234 -ILCTWFHELAPS-----ANKILPSIIPVGPL-IANGQ-----PTGNFWSEDLT-CLSWL 280
++ F+EL I + VGP+ + N + GN S D T CL WL
Sbjct: 218 GVVVNSFNELEHGCAEAYEKAIKKKVWCVGPVSLCNKRNLDKFERGNKASIDETQCLEWL 277
Query: 281 DKQPPGSVIYAAFGSISKLSQQQFNELALGLELAGQPFLCGVRPG--FINGSSTNNPDGL 338
D P SVIYA GS+ +L Q EL LGLE + +PF+ ++ G +
Sbjct: 278 DSMKPRSVIYACLGSLCRLVPSQLIELGLGLEASKKPFIWVIKTGEKHSELEEWLVKENF 337
Query: 339 VAKVADFGKMVK-WAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYI 397
++ G ++K WAPQ +L+HP++ +LTHCGWNST+EGI GVP + WP +
Sbjct: 338 EERIKGRGLLIKGWAPQVLILSHPAIGGFLTHCGWNSTIEGICSGVPMITWPLFAEQFLN 397
Query: 398 KSCICDDWKIGL---------WLEPDDNGI-IGRHEIKRKVDELLSND-----VVRKNAL 442
+ I + +IG+ W + + G+ + + E+++ V L+ + R+ A
Sbjct: 398 EKLIVEVLRIGVRVGVEVPVRWGDEERVGVLVKKDEVEKAVKTLMDDGGEEGERRRRRAQ 457
Query: 443 KLKELAQKSVTKEGSSSKNLEYFIKQITE 471
+L +A+K++ GSS NL I+ + +
Sbjct: 458 ELGVMARKAMELGGSSHINLSILIQDVLK 486
|
Length = 491 |
| >gnl|CDD|178572 PLN02992, PLN02992, coniferyl-alcohol glucosyltransferase | Back alignment and domain information |
|---|
Score = 141 bits (357), Expect = 4e-37
Identities = 131/488 (26%), Positives = 210/488 (43%), Gaps = 80/488 (16%)
Query: 16 TNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDA 75
T H + S P GHV +++L RL+ F T F+ E S Q + G
Sbjct: 4 TKPHAAMFSSPGMGHVIPVIELGKRLSANH---GFHVTVFVLETDAASAQSKFLNSTG-- 58
Query: 76 QQLVRIVPLPD----GLEPEDDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCV 131
V IV LP GL + I +M + L KI E +K T +
Sbjct: 59 ---VDIVGLPSPDISGLVDPSAH-----VVTKIGVIMREAVPTLRSKI--AEMHQKPTAL 108
Query: 132 IADVTFGWALQVAAKLELKKASIYTSAPGILAMIMNIPKFIEAGIISSDGIVIKNEKIEL 191
I D+ AL + + + S L + + P D + + ++
Sbjct: 109 IVDLFGTDALCLGGEFNMLTYIFIASNARFLGVSIYYPTL--------DKDIKEEHTVQR 160
Query: 192 SPY-LPAASPAEF-----LWNCPGNPSLQTLMFQYINVIRQNI--EASDRILCTWFHELA 243
P +P P F + P P Y + +R + +D IL + E+
Sbjct: 161 KPLAMPGCEPVRFEDTLDAYLVPDEPV-------YRDFVRHGLAYPKADGILVNTWEEME 213
Query: 244 PSANKIL--PSII---------PVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAA 292
P + K L P ++ P+GPL Q + D L WL+KQP SV+Y +
Sbjct: 214 PKSLKSLQDPKLLGRVARVPVYPIGPLCRPIQSS----KTDHPVLDWLNKQPNESVLYIS 269
Query: 293 FGSISKLSQQQFNELALGLELAGQPFLCGVRPGFINGSSTNN-----------------P 335
FGS LS +Q ELA GLE++ Q F+ VRP ++GS+ + P
Sbjct: 270 FGSGGSLSAKQLTELAWGLEMSQQRFVWVVRPP-VDGSACSAYFSANGGETRDNTPEYLP 328
Query: 336 DGLVAKVADFGKMV-KWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDH 394
+G V++ D G +V WAPQ ++LAH +V +LTHCGW+ST+E + GVP + WP +
Sbjct: 329 EGFVSRTHDRGFVVPSWAPQAEILAHQAVGGFLTHCGWSSTLESVVGGVPMIAWPLFAEQ 388
Query: 395 LYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSND---VVRKNALKLKELAQKS 451
+ + D+ I + + D +I R +I+ V +++ + +R+ KL++ A+ S
Sbjct: 389 NMNAALLSDELGIAVRSD-DPKEVISRSKIEALVRKVMVEEEGEEMRRKVKKLRDTAEMS 447
Query: 452 VTKEGSSS 459
++ +G
Sbjct: 448 LSIDGGGV 455
|
Length = 481 |
| >gnl|CDD|215112 PLN02167, PLN02167, UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Score = 137 bits (347), Expect = 1e-35
Identities = 124/480 (25%), Positives = 209/480 (43%), Gaps = 41/480 (8%)
Query: 20 VLLVSFPAQGHVASLMKLAHRLA--DCRIKVTFVTTEFICERIKESRQLGSF-SEMGDAQ 76
++ V FP+ GH+ ++ A RL D RI T + + + Q +F + ++
Sbjct: 6 LIFVPFPSTGHILVTIEFAKRLINLDRRIH----TITILYWSLPFAPQADAFLKSLIASE 61
Query: 77 QLVRIVPLPDGLEPED----DRKDEAKMTRSISKVMPGYLEELIQKINQQEE--DEKITC 130
+R+V LP+ +P + EA + + K++P + L ++ ++E ++
Sbjct: 62 PRIRLVTLPEVQDPPPMELFVKASEAYILEFVKKMVPLVRDALSTLVSSRDESDSVRVAG 121
Query: 131 VIADVTFGWALQVAAKLELKKASIYTSAPGILAMIMNIPKFIEAGIISSDGIVIKNEKIE 190
++ D + V + L T G L M+ +P+ +S+ + E+
Sbjct: 122 LVLDFFCVPLIDVGNEFNLPSYIFLTCNAGFLGMMKYLPE--RHRKTASEFDLSSGEEEL 179
Query: 191 LSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSANKIL 250
P + P + L PG ++ I + + IL F EL P+A
Sbjct: 180 PIPGFVNSVPTKVL--PPG--LFMKESYEAWVEIAERFPEAKGILVNSFTELEPNAFDYF 235
Query: 251 -------PSIIPVGP-LIANGQPTGNFWSEDLT-CLSWLDKQPPGSVIYAAFGSISKLSQ 301
P + PVGP L + + N S D + WLD QP SV++ FGS+ L
Sbjct: 236 SRLPENYPPVYPVGPILSLKDRTSPNLDSSDRDRIMRWLDDQPESSVVFLCFGSLGSLPA 295
Query: 302 QQFNELALGLELAGQPFLCGVRPGFINGSSTNN--PDGLVAKVADFGKMVKWAPQEKVLA 359
Q E+A LEL G FL +R +S P+G + +V G + WAPQ ++LA
Sbjct: 296 PQIKEIAQALELVGCRFLWSIRTNPAEYASPYEPLPEGFMDRVMGRGLVCGWAPQVEILA 355
Query: 360 HPSVACYLTHCGWNSTMEGISMGVPFLCWP-WGHDHLYIKSCICDDWKIGLWLE------ 412
H ++ +++HCGWNS +E + GVP WP + L + + + +GL +E
Sbjct: 356 HKAIGGFVSHCGWNSVLESLWFGVPIATWPMYAEQQLNAFTMVKE---LGLAVELRLDYV 412
Query: 413 PDDNGIIGRHEIKRKVDELL-SNDVVRKNALKLKELAQKSVTKEGSSSKNLEYFIKQITE 471
I+ EI V L+ DV RK ++ E A+K+V GSS ++ FI +
Sbjct: 413 SAYGEIVKADEIAGAVRSLMDGEDVPRKKVKEIAEAARKAVMDGGSSFVAVKRFIDDLLG 472
|
Length = 475 |
| >gnl|CDD|177857 PLN02207, PLN02207, UDP-glycosyltransferase | Back alignment and domain information |
|---|
Score = 135 bits (340), Expect = 9e-35
Identities = 120/485 (24%), Positives = 219/485 (45%), Gaps = 56/485 (11%)
Query: 17 NVHVLLVSFPAQGHVASLMKLAHRL--ADCRIKVTFVTTEFICERIKESRQLGSF-SEMG 73
N ++ + P GH+ ++ A RL D RI++T + +++ L ++ +
Sbjct: 3 NAELIFIPTPTVGHLVPFLEFARRLIEQDDRIRITILLM-----KLQGQSHLDTYVKSIA 57
Query: 74 DAQQLVRIVPLPDGLEPEDDRKDEAKMTRSISKVMPGYLEE---LIQKI------NQQEE 124
+Q VR + +P E + K T+S+ + +E+ L++ I + +
Sbjct: 58 SSQPFVRFIDVP-----ELEEKPTLGGTQSVEAYVYDVIEKNIPLVRNIVMDILSSLALD 112
Query: 125 DEKITCVIADVTFGWALQVAAKLELKKASIYTSAPGILAMIMNIPKFIEAGIISSDGIVI 184
K+ +AD + VA + L T+ G LAM+ +++ + +
Sbjct: 113 GVKVKGFVADFFCLPMIDVAKDVSLPFYVFLTTNSGFLAMM----QYLADRHSKDTSVFV 168
Query: 185 KNEKIELS-PYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELA 243
+N + LS P PA L P ++ Y+ + +A+ ++ + F
Sbjct: 169 RNSEEMLSIPGFVNPVPANVL---PSALFVEDGYDAYVKLAILFTKANGILVNSSFDIEP 225
Query: 244 PSANKIL-----PSIIPVGPLI-ANGQPTGNFWSEDLTC----LSWLDKQPPGSVIYAAF 293
S N L PS+ VGP+ QP +DL + WLD QP SV++ F
Sbjct: 226 YSVNHFLDEQNYPSVYAVGPIFDLKAQPHPE---QDLARRDELMKWLDDQPEASVVFLCF 282
Query: 294 GSISKLSQQQFNELALGLELAGQPFLCGVRPGFINGSSTNN---PDGLVAKVADFGKMVK 350
GS+ +L E+A GLEL FL +R TN+ P+G + +V+ G +
Sbjct: 283 GSMGRLRGPLVKEIAHGLELCQYRFLWSLR----TEEVTNDDLLPEGFLDRVSGRGMICG 338
Query: 351 WAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLW 410
W+PQ ++LAH +V +++HCGWNS +E + GVP + WP + + + K+ +
Sbjct: 339 WSPQVEILAHKAVGGFVSHCGWNSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVE 398
Query: 411 LEPD----DNGIIGRHEIKRKVDELLS--NDVVRKNALKLKELAQKSVTKEGSSSKNLEY 464
L+ D + I+ +EI+ + +++ N+VVRK + + ++ Q++ GSS +E
Sbjct: 399 LKLDYRVHSDEIVNANEIETAIRCVMNKDNNVVRKRVMDISQMIQRATKNGGSSFAAIEK 458
Query: 465 FIKQI 469
FI +
Sbjct: 459 FIHDV 463
|
Length = 468 |
| >gnl|CDD|215304 PLN02554, PLN02554, UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Score = 131 bits (332), Expect = 1e-33
Identities = 118/498 (23%), Positives = 209/498 (41%), Gaps = 66/498 (13%)
Query: 18 VHVLLVSFPAQGHVASLMKLAHRL--ADCRIKVTFVTTEFICE-RIKESRQLGSFSEMGD 74
+ ++ + P GH+ ++LA L +D R+ +T + S + S S
Sbjct: 3 IELVFIPSPGIGHLRPTVELAKLLVDSDDRLSITVIIIPSRSGDDASSSAYIASLS--AS 60
Query: 75 AQQLVRIVPLPDGLEPEDDRKD--------EAKMTRSISKVMPGYLEELIQKINQQEEDE 126
++ +R + G +P + + K+ +++K++
Sbjct: 61 SEDRLRYEVISAGDQPTTEDPTFQSYIDNQKPKVRDAVAKLVDDS---------STPSSP 111
Query: 127 KITCVIADVTFGWALQVAAKLELKKASIYTSAPGILAMIMNIPKFIEAGIISSDGIVIKN 186
++ + D+ + VA + + YTS L + +++ + D +++
Sbjct: 112 RLAGFVVDMFCTSMIDVANEFGVPSYMFYTSNATFLGLQLHVQMLYDEK--KYDVSELED 169
Query: 187 EKIELS-PYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQ--NIEASDRILCTWFHELA 243
++EL P L P + L PS+ + Q IL EL
Sbjct: 170 SEVELDVPSLTRPYPVKCL------PSVLLSKEWLPLFLAQARRFREMKGILVNTVAELE 223
Query: 244 PSANKIL-------PSIIPVGPLIANGQPTGNFWSED--LTCLSWLDKQPPGSVIYAAFG 294
P A K P + PVGP++ + + +G+ ++ L WLD+QPP SV++ FG
Sbjct: 224 PQALKFFSGSSGDLPPVYPVGPVL-HLENSGDDSKDEKQSEILRWLDEQPPKSVVFLCFG 282
Query: 295 SISKLSQQQFNELALGLELAGQPFLCGVRPGFINGSS------TNN----PDGLVAKVAD 344
S+ S++Q E+A+ LE +G FL +R N TN P+G + + D
Sbjct: 283 SMGGFSEEQAREIAIALERSGHRFLWSLRRASPNIMKEPPGEFTNLEEILPEGFLDRTKD 342
Query: 345 FGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGH----------DH 394
GK++ WAPQ VLA P++ ++THCGWNS +E + GVP WP +
Sbjct: 343 IGKVIGWAPQVAVLAKPAIGGFVTHCGWNSILESLWFGVPMAAWPLYAEQKFNAFEMVEE 402
Query: 395 LYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDV-VRKNALKLKELAQKSVT 453
L + I W+ L + + EI+R + L+ D VRK ++ E ++
Sbjct: 403 LGLAVEIRKYWRGDLLAGEME--TVTAEEIERGIRCLMEQDSDVRKRVKEMSEKCHVALM 460
Query: 454 KEGSSSKNLEYFIKQITE 471
GSS L+ FI+ +T+
Sbjct: 461 DGGSSHTALKKFIQDVTK 478
|
Length = 481 |
| >gnl|CDD|178589 PLN03015, PLN03015, UDP-glucosyl transferase | Back alignment and domain information |
|---|
Score = 120 bits (302), Expect = 1e-29
Identities = 117/486 (24%), Positives = 217/486 (44%), Gaps = 73/486 (15%)
Query: 19 HVLLVSFPAQGHVASLMKLAHRLADC-RIKVTFVTTEFICERIKESRQLGSFSEMGDAQQ 77
H LLV+ P GH+ +++L +RL+ I VT + E+ + + + A+
Sbjct: 5 HALLVASPGLGHLIPILELGNRLSSVLNIHVTILAVTSGSSSPTETEAIHAAA----ART 60
Query: 78 LVRIVPLPDGLEPEDDRKDEAKMTRSISKV--MPGYLEELIQKINQQEEDEKITCVIADV 135
+I +P D T+ + K+ M + + ++ + + K T +I D
Sbjct: 61 TCQITEIPSVDVDNLVEPDATIFTKMVVKMRAMKPAVRDAVKSMKR-----KPTVMIVDF 115
Query: 136 TFGWALQVAAKLELKKASIYTSAPG---ILAMIMNIPKFIEAGIISSDGIVIKNEKIELS 192
FG AL A ++ + Y P LA+++ +P V++ E +++
Sbjct: 116 -FGTALMSIAD-DVGVTAKYVYIPSHAWFLAVMVYLPVL---------DTVVEGEYVDIK 164
Query: 193 PYL--PAASPAEFLWNCPGNPSLQTLMF-----QYINVIRQNIEA--SDRILCTWFHELA 243
L P P G L M QY +R +E SD +L + EL
Sbjct: 165 EPLKIPGCKPV-------GPKELMETMLDRSDQQYKECVRSGLEVPMSDGVLVNTWEELQ 217
Query: 244 PSA----------NKILPSII-PVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAA 292
+ N+++ + P+GP++ S WLDKQ SV+Y
Sbjct: 218 GNTLAALREDMELNRVMKVPVYPIGPIVRTNVHVEKRNS----IFEWLDKQGERSVVYVC 273
Query: 293 FGSISKLSQQQFNELALGLELAGQPFLCGVR--PGFINGSSTNN-------PDGLVAKVA 343
GS L+ +Q ELA GLEL+GQ F+ +R ++ SS+++ P+G + +
Sbjct: 274 LGSGGTLTFEQTVELAWGLELSGQRFVWVLRRPASYLGASSSDDDQVSASLPEGFLDRTR 333
Query: 344 DFGKMV-KWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCIC 402
G +V +WAPQ ++L+H S+ +L+HCGW+S +E ++ GVP + WP + + +
Sbjct: 334 GVGLVVTQWAPQVEILSHRSIGGFLSHCGWSSVLESLTKGVPIVAWPLYAEQWMNATLLT 393
Query: 403 DDWKIGL-WLEPDDNGIIGRHEIKRKVDELLSND-----VVRKNALKLKELAQKSVTKEG 456
++ + + E +IGR E+ V ++++ + +R A +++ ++++ + G
Sbjct: 394 EEIGVAVRTSELPSEKVIGREEVASLVRKIVAEEDEEGQKIRAKAEEVRVSSERAWSHGG 453
Query: 457 SSSKNL 462
SS +L
Sbjct: 454 SSYNSL 459
|
Length = 470 |
| >gnl|CDD|215084 PLN00164, PLN00164, glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 119 bits (299), Expect = 4e-29
Identities = 74/232 (31%), Positives = 114/232 (49%), Gaps = 23/232 (9%)
Query: 251 PSIIPVGPLI--ANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELA 308
P++ P+GP+I A P E C+ WLD QPP SV++ FGS+ Q E+A
Sbjct: 238 PTVYPIGPVISLAFTPPAEQPPHE---CVRWLDAQPPASVVFLCFGSMGFFDAPQVREIA 294
Query: 309 LGLELAGQPFLCGVRPGFINGSSTNN--------PDGLVAKVADFGKMV--KWAPQEKVL 358
GLE +G FL +R GS P+G + + G +V WAPQ+++L
Sbjct: 295 AGLERSGHRFLWVLRGPPAAGSRHPTDADLDELLPEGFLERTKGRG-LVWPTWAPQKEIL 353
Query: 359 AHPSVACYLTHCGWNSTMEGISMGVPFLCWPW-GHDHLYIKSCICD-DWKIGLWLEPDDN 416
AH +V ++THCGWNS +E + GVP WP HL + D + + ++ +
Sbjct: 354 AHAAVGGFVTHCGWNSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDRKRD 413
Query: 417 GIIGRHEIKRKVDELL--SNDVVRK---NALKLKELAQKSVTKEGSSSKNLE 463
+ E++R V L+ + RK A ++K +K+V + GSS L+
Sbjct: 414 NFVEAAELERAVRSLMGGGEEEGRKAREKAAEMKAACRKAVEEGGSSYAALQ 465
|
Length = 480 |
| >gnl|CDD|178275 PLN02670, PLN02670, transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Score = 105 bits (263), Expect = 2e-24
Identities = 113/412 (27%), Positives = 172/412 (41%), Gaps = 79/412 (19%)
Query: 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERI-KESRQLGSFSEMGDAQ 76
+HV + + A GH+ ++L+ LA K++F++T R+ K QL S +
Sbjct: 7 LHVAMFPWLAMGHLIPFLRLSKLLAQKGHKISFISTPRNLHRLPKIPSQLSS------SI 60
Query: 77 QLVRIVPLPD--GLEPEDDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIAD 134
LV PLP GL + + T+ +++ + L + E K +I D
Sbjct: 61 TLVSF-PLPSVPGLPSSAESSTDVPYTKQ--QLLKKAFDLLEPPLTTFLETSKPDWIIYD 117
Query: 135 VTFGWALQVAAKLELKKA--SIYTSAPGILAMIMNIPKFIEAGIISSDGIVIKNEKIELS 192
W +AA+L + KA S++T+A L+ I +E G + S
Sbjct: 118 YASHWLPSIAAELGISKAFFSLFTAA--TLSFIGPPSSLMEGGDLRS------------- 162
Query: 193 PYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQ-------------------NIEASDR 233
+ +F P P ++F+Y V + I SD
Sbjct: 163 ------TAEDFTVVPPWVPFESNIVFRYHEVTKYVEKTEEDETGPSDSVRFGFAIGGSDV 216
Query: 234 ILC--------TWFHELAPSANKILPSIIPVG---PLI----ANGQPTGNFWSEDLTCLS 278
++ WF L+ K IIP+G P+I + W
Sbjct: 217 VIIRSSPEFEPEWFDLLSDLYRK---PIIPIGFLPPVIEDDEEDDTIDVKGWVR---IKE 270
Query: 279 WLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELAGQPFLCGVR--PGFINGSSTNNPD 336
WLDKQ SV+Y A G+ + L +++ ELALGLE + PF +R PG + PD
Sbjct: 271 WLDKQRVNSVVYVALGTEASLRREEVTELALGLEKSETPFFWVLRNEPGTTQNALEMLPD 330
Query: 337 GLVAKVADFGKM-VKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMG-VPFL 386
G +V G + V W PQ K+L+H SV +LTHCGWNS +EG+ G V L
Sbjct: 331 GFEERVKGRGMIHVGWVPQVKILSHESVGGFLTHCGWNSVVEGLGFGRVLIL 382
|
Length = 472 |
| >gnl|CDD|177807 PLN00414, PLN00414, glycosyltransferase family protein | Back alignment and domain information |
|---|
Score = 95.5 bits (237), Expect = 3e-21
Identities = 60/198 (30%), Positives = 100/198 (50%), Gaps = 17/198 (8%)
Query: 258 PLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELAGQP 317
P +G+P + W+ WL+ PGSV++ AFG+ + QF E LG+EL G P
Sbjct: 230 PQNKSGKPLEDRWNH------WLNGFEPGSVVFCAFGTQFFFEKDQFQEFCLGMELTGLP 283
Query: 318 FLCGVRPGFINGSSTNN---PDGLVAKVADFGKMVK-WAPQEKVLAHPSVACYLTHCGWN 373
FL V P GSST P+G +V G + + W Q +L+HPSV C++ HCG+
Sbjct: 284 FLIAVMPP--KGSSTVQEALPEGFEERVKGRGIVWEGWVEQPLILSHPSVGCFVNHCGFG 341
Query: 374 STMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLS 433
S E + + P D + I + ++ ++ + ++ +D+G + ++ V ++
Sbjct: 342 SMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQREDSGWFSKESLRDTVKSVMD 401
Query: 434 ND-----VVRKNALKLKE 446
D +V++N KLKE
Sbjct: 402 KDSEIGNLVKRNHKKLKE 419
|
Length = 446 |
| >gnl|CDD|201077 pfam00201, UDPGT, UDP-glucoronosyl and UDP-glucosyl transferase | Back alignment and domain information |
|---|
Score = 92.9 bits (231), Expect = 3e-20
Identities = 40/147 (27%), Positives = 63/147 (42%), Gaps = 28/147 (19%)
Query: 249 ILPSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPG--SVIYAAFGS-ISKLSQQQFN 305
+LP++ +G L N +P ++ L Q G V+ + GS +S + +++ N
Sbjct: 244 LLPNMEFIGGL--NCKP-----AKPLPQEMEAFVQSSGEHGVVVFSLGSMVSNIPEEKAN 296
Query: 306 ELALGLELAGQPFLC---GVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPS 362
E+A L Q L G +P + N ++VKW PQ +L HP
Sbjct: 297 EIASALAQIPQKVLWRFDGTKPSTLG----RNT-----------RLVKWLPQNDLLGHPK 341
Query: 363 VACYLTHCGWNSTMEGISMGVPFLCWP 389
++TH G N E I GVP + P
Sbjct: 342 TRAFVTHAGSNGVYEAICHGVPMVGMP 368
|
Length = 500 |
| >gnl|CDD|178364 PLN02764, PLN02764, glycosyltransferase family protein | Back alignment and domain information |
|---|
Score = 92.4 bits (229), Expect = 3e-20
Identities = 58/204 (28%), Positives = 101/204 (49%), Gaps = 15/204 (7%)
Query: 277 LSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELAGQPFLCGVRPGFINGSSTNN-- 334
+ WL P SV++ A GS L + QF EL LG+EL G PFL V+P GSST
Sbjct: 248 VKWLSGYEPDSVVFCALGSQVILEKDQFQELCLGMELTGSPFLVAVKPP--RGSSTIQEA 305
Query: 335 -PDGLVAKVADFGKMV-KWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGH 392
P+G +V G + W Q +L+HPSV C+++HCG+ S E + + P
Sbjct: 306 LPEGFEERVKGRGVVWGGWVQQPLILSHPSVGCFVSHCGFGSMWESLLSDCQIVLVPQLG 365
Query: 393 DHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSND-----VVRKNALKLKEL 447
D + + D+ K+ + + ++ G + ++ ++ ++ D +V+KN K +E
Sbjct: 366 DQVLNTRLLSDELKVSVEVAREETGWFSKESLRDAINSVMKRDSEIGNLVKKNHTKWRE- 424
Query: 448 AQKSVTKEGSSSKNLEYFIKQITE 471
++ G + ++ FI+ + +
Sbjct: 425 ---TLASPGLLTGYVDNFIESLQD 445
|
Length = 453 |
| >gnl|CDD|99960 cd03784, GT1_Gtf_like, This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Score = 91.3 bits (227), Expect = 5e-20
Identities = 68/447 (15%), Positives = 127/447 (28%), Gaps = 77/447 (17%)
Query: 19 HVLLVSFPAQGHVASLMKLAHRL--ADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQ 76
VL+ + ++G V L+ LA L A V T E G
Sbjct: 2 RVLITTIGSRGDVQPLVALAWALRAAGHE--VRVATPP---EFADLVEAAG--------- 47
Query: 77 QLVRIVPLPDGLEPEDDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKIT------- 129
+ VP+ + + + + L+++ + D+ +
Sbjct: 48 --LEFVPVGGDPDELLASPERNAGLLLLGPGLLLGALRLLRREAEAMLDDLVAAARDWGP 105
Query: 130 -CVIADVTFGWALQVAAKLELKKASIYTSAPGILAMIMNIPKFIEAGIISSDGIVIKNEK 188
V+AD A L P + ++ P + G
Sbjct: 106 DLVVADPLAFAGAVAAEALG---------IPAVRLLLG--PDTPTSAFPPPLGRAN---- 150
Query: 189 IELSPYLPAASPAEFLWNCPGNPSLQTLMFQY--INVIRQNIEASDRILCTWFHELAP-- 244
A LW L+ + + + + L P
Sbjct: 151 -----LRLYALLEAELWQDLLGAWLRARRRRLGLPPLSLLDGSDVPELYGFSPAVLPPPP 205
Query: 245 -SANKILPSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSI-SKLSQQ 302
L + + NG P W +L P +Y FGS+ + +
Sbjct: 206 DWPRFDLVTGYGFRDVPYNGPPPPELWL-------FLAAGRP--PVYVGFGSMVVRDPEA 256
Query: 303 QFNELALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPS 362
+ GQ + + G G + ++V + P + +L P
Sbjct: 257 LARLDVEAVATLGQRAILSLGWG---------GLGAEDLPDNV-RVVDFVPHDWLL--PR 304
Query: 363 VACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRH 422
A + H G +T + GVP L P+ D + + + G L+P + +
Sbjct: 305 CAAVVHHGGAGTTAAALRAGVPQLVVPFFGDQPF-WAARVAELGAGPALDPRE---LTAE 360
Query: 423 EIKRKVDELLSNDVVRKNALKLKELAQ 449
+ + LL R+ A L+ + +
Sbjct: 361 RLAAALRRLLDPPSRRRAAALLRRIRE 387
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. Length = 401 |
| >gnl|CDD|177858 PLN02208, PLN02208, glycosyltransferase family protein | Back alignment and domain information |
|---|
Score = 90.8 bits (225), Expect = 1e-19
Identities = 57/202 (28%), Positives = 94/202 (46%), Gaps = 17/202 (8%)
Query: 255 PVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELA 314
P+ P +P WS +L PP SV++ + GS L + QF EL LG+EL
Sbjct: 226 PMFPEPDTSKPLEEQWSH------FLSGFPPKSVVFCSLGSQIILEKDQFQELCLGMELT 279
Query: 315 GQPFLCGVRPGFINGSSTNN---PDGLVAKVADFGKMV-KWAPQEKVLAHPSVACYLTHC 370
G PFL V+P GSST P+G +V G + W Q +L HPS+ C++ HC
Sbjct: 280 GLPFLIAVKPP--RGSSTVQEGLPEGFEERVKGRGVVWGGWVQQPLILDHPSIGCFVNHC 337
Query: 371 GWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDE 430
G + E + + P+ D + + +++++ + + + G + + +
Sbjct: 338 GPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREKTGWFSKESLSNAIKS 397
Query: 431 LLSND-----VVRKNALKLKEL 447
++ D +VR N KLKE+
Sbjct: 398 VMDKDSDLGKLVRSNHTKLKEI 419
|
Length = 442 |
| >gnl|CDD|233407 TIGR01426, MGT, glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Score = 64.7 bits (158), Expect = 3e-11
Identities = 85/437 (19%), Positives = 142/437 (32%), Gaps = 93/437 (21%)
Query: 24 SFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVP 83
+ PA GHV + + L +VT+ TTE ER++ + V
Sbjct: 2 NIPAHGHVNPTLGVVEELVARGHRVTYATTEEFAERVEAAG--------------AEFVL 47
Query: 84 LPDGLEPEDDRKDEAKMTRSISKVMPGYLEELIQKINQQEE---DEKITCVIADVTFGWA 140
L P D+ ++ L+E + Q EE ++ ++ D+
Sbjct: 48 YGSALPPPDNP--PENTEEEPIDIIEKLLDEAEDVLPQLEEAYKGDRPDLIVYDIASWTG 105
Query: 141 LQVAAKLEL---KKASIYTSAPGILAMIMNI-PKFIEAGIISSDGIVIKNEKIE--LSPY 194
+A K ++ + + M+ E G I+ G+ ++ L +
Sbjct: 106 RLLARKWDVPVISSFPTFAANEEFEEMVSPAGEGSAEEGAIAERGLAEYVARLSALLEEH 165
Query: 195 LPAASPAEFLWNCPGNPSLQTL--MFQYINVIRQNIEASDRILCTWFHELAPSANKILPS 252
P EFL + +L FQ E D F
Sbjct: 166 GITTPPVEFLAAPRRDLNLVYTPKAFQP------AGETFDDSFT--F------------- 204
Query: 253 IIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGS---VIYAAFGSISKLSQQQFNELAL 309
VGP I G + SW + PG V+ + G++ FN
Sbjct: 205 ---VGPCI--GDRKED--------GSW---ERPGDGRPVVLISLGTV-------FNNQPS 241
Query: 310 GLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVK------WAPQEKVLAHPSV 363
+ F + S D AD G++ W PQ ++L
Sbjct: 242 FYRTCVEAF--RDLDWHVVLSVGRGVD-----PADLGELPPNVEVRQWVPQLEILKKADA 294
Query: 364 ACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHE 423
+TH G NSTME + GVP + P G D I + +G L P++ + +
Sbjct: 295 F--ITHGGMNSTMEALFNGVPMVAVPQGADQPMTARRI-AELGLGRHLPPEE---VTAEK 348
Query: 424 IKRKVDELLSNDVVRKN 440
++ V +LS+ +
Sbjct: 349 LREAVLAVLSDPRYAER 365
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production [Cellular processes, Toxin production and resistance]. Length = 392 |
| >gnl|CDD|224732 COG1819, COG1819, Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | Back alignment and domain information |
|---|
Score = 60.5 bits (147), Expect = 7e-10
Identities = 78/444 (17%), Positives = 146/444 (32%), Gaps = 64/444 (14%)
Query: 19 HVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQL 78
+L V A GHV + L L +V F +T + ++ G A
Sbjct: 3 KILFVVCGAYGHVNPCLALGKELRRRGHEVVFASTG-------KFKEF--VEAAGLAFV- 52
Query: 79 VRIVPLPDGLEPEDDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFG 138
P+ D +D + +S +++ + + + + + E E ++ D
Sbjct: 53 --AYPIRDSELATED--GKFAGVKSFRRLLQQFKKLIRELLELLRELEPD--LVVDDARL 106
Query: 139 WALQVAAKLELKKASIYTSAPGILAMIMNIPKFIEAGIISSDGIVIKNE-KIELSPYLPA 197
A L P + + + A + + I + I L P P
Sbjct: 107 SLGLAARLL---------GIPVVGINVAPYTP-LPAAGLPLPPVGIAGKLPIPLYPLPPR 156
Query: 198 -ASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSANKIL---PSI 253
P F + V+R+N+ + + +I
Sbjct: 157 LVRPLIFARSW-----------LPKLVVRRNLGLELGLPNIRRLFASGPLLEIAYTDVLF 205
Query: 254 IPVGPLIANGQPTGNF-WSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLE 312
P L G G W+ P ++Y + G++ + + + L
Sbjct: 206 PPGDRLPFIGPYIGPLLGEAANELPYWIPADRP--IVYVSLGTVG--NAVELLAIVLEA- 260
Query: 313 LAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGW 372
LA V G + N PD VAD + PQ ++L + H G
Sbjct: 261 LADLDVRVIVSLGGARDTLVNVPDN--VIVAD------YVPQLELLPRADAV--IHHGGA 310
Query: 373 NSTMEGISMGVPFLCWPWGHD-HLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDEL 431
+T E + GVP + P G D L + ++ G+ L ++ + ++ V+E+
Sbjct: 311 GTTSEALYAGVPLVVIPDGADQPLNAE--RVEELGAGIALPFEE---LTEERLRAAVNEV 365
Query: 432 LSNDVVRKNALKLKELAQKSVTKE 455
L++D R+ A +L E ++
Sbjct: 366 LADDSYRRAAERLAEEFKEEDGPA 389
|
Length = 406 |
| >gnl|CDD|223071 PHA03392, egt, ecdysteroid UDP-glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 40.7 bits (96), Expect = 0.001
Identities = 17/40 (42%), Positives = 21/40 (52%)
Query: 350 KWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWP 389
KW PQ VL H +V ++T G ST E I VP + P
Sbjct: 352 KWFPQRAVLKHKNVKAFVTQGGVQSTDEAIDALVPMVGLP 391
|
Length = 507 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 471 | |||
| PLN02562 | 448 | UDP-glycosyltransferase | 100.0 | |
| PLN02410 | 451 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 100.0 | |
| PLN02555 | 480 | limonoid glucosyltransferase | 100.0 | |
| PLN02173 | 449 | UDP-glucosyl transferase family protein | 100.0 | |
| PLN02152 | 455 | indole-3-acetate beta-glucosyltransferase | 100.0 | |
| PLN02207 | 468 | UDP-glycosyltransferase | 100.0 | |
| PLN02554 | 481 | UDP-glycosyltransferase family protein | 100.0 | |
| PLN02210 | 456 | UDP-glucosyl transferase | 100.0 | |
| PLN02863 | 477 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 100.0 | |
| PLN02992 | 481 | coniferyl-alcohol glucosyltransferase | 100.0 | |
| PLN02448 | 459 | UDP-glycosyltransferase family protein | 100.0 | |
| PLN00164 | 480 | glucosyltransferase; Provisional | 100.0 | |
| PLN03007 | 482 | UDP-glucosyltransferase family protein | 100.0 | |
| PLN03004 | 451 | UDP-glycosyltransferase | 100.0 | |
| PLN02764 | 453 | glycosyltransferase family protein | 100.0 | |
| PLN02167 | 475 | UDP-glycosyltransferase family protein | 100.0 | |
| PLN03015 | 470 | UDP-glucosyl transferase | 100.0 | |
| PLN02208 | 442 | glycosyltransferase family protein | 100.0 | |
| PLN02670 | 472 | transferase, transferring glycosyl groups | 100.0 | |
| PLN02534 | 491 | UDP-glycosyltransferase | 100.0 | |
| PLN00414 | 446 | glycosyltransferase family protein | 100.0 | |
| PHA03392 | 507 | egt ecdysteroid UDP-glucosyltransferase; Provision | 100.0 | |
| PF00201 | 500 | UDPGT: UDP-glucoronosyl and UDP-glucosyl transfera | 100.0 | |
| TIGR01426 | 392 | MGT glycosyltransferase, MGT family. This model de | 100.0 | |
| cd03784 | 401 | GT1_Gtf_like This family includes the Gtfs, a grou | 100.0 | |
| COG1819 | 406 | Glycosyl transferases, related to UDP-glucuronosyl | 100.0 | |
| KOG1192 | 496 | consensus UDP-glucuronosyl and UDP-glucosyl transf | 100.0 | |
| PRK12446 | 352 | undecaprenyldiphospho-muramoylpentapeptide beta-N- | 99.95 | |
| PF13528 | 318 | Glyco_trans_1_3: Glycosyl transferase family 1 | 99.94 | |
| TIGR00661 | 321 | MJ1255 conserved hypothetical protein. This model | 99.92 | |
| COG0707 | 357 | MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami | 99.91 | |
| PRK00726 | 357 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.87 | |
| cd03785 | 350 | GT1_MurG MurG is an N-acetylglucosaminyltransferas | 99.83 | |
| TIGR01133 | 348 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.78 | |
| COG4671 | 400 | Predicted glycosyl transferase [General function p | 99.77 | |
| TIGR00215 | 385 | lpxB lipid-A-disaccharide synthase. Lipid-A precur | 99.77 | |
| PRK13609 | 380 | diacylglycerol glucosyltransferase; Provisional | 99.73 | |
| TIGR03590 | 279 | PseG pseudaminic acid biosynthesis-associated prot | 99.69 | |
| PRK00025 | 380 | lpxB lipid-A-disaccharide synthase; Reviewed | 99.67 | |
| PRK13608 | 391 | diacylglycerol glucosyltransferase; Provisional | 99.63 | |
| PLN02605 | 382 | monogalactosyldiacylglycerol synthase | 99.55 | |
| TIGR03492 | 396 | conserved hypothetical protein. This protein famil | 99.53 | |
| PF04101 | 167 | Glyco_tran_28_C: Glycosyltransferase family 28 C-t | 99.52 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to | 99.46 | |
| PF03033 | 139 | Glyco_transf_28: Glycosyltransferase family 28 N-t | 99.46 | |
| PLN02871 | 465 | UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | 99.4 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 99.33 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related | 99.3 | |
| TIGR00236 | 365 | wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras | 99.29 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related | 99.27 | |
| COG3980 | 318 | spsG Spore coat polysaccharide biosynthesis protei | 99.26 | |
| PRK05749 | 425 | 3-deoxy-D-manno-octulosonic-acid transferase; Revi | 99.26 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related | 99.25 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely r | 99.25 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related | 99.24 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to | 99.23 | |
| cd03805 | 392 | GT1_ALG2_like This family is most closely related | 99.23 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related | 99.23 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related | 99.2 | |
| cd03786 | 363 | GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th | 99.18 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 99.15 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related | 99.14 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related | 99.09 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related | 99.07 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to | 99.07 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino | 99.07 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related | 99.03 | |
| PF04007 | 335 | DUF354: Protein of unknown function (DUF354); Inte | 99.02 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 99.0 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the trans | 98.97 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely relate | 98.97 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely rela | 98.93 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related | 98.92 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related | 98.91 | |
| TIGR02472 | 439 | sucr_P_syn_N sucrose-phosphate synthase, putative, | 98.89 | |
| PRK14089 | 347 | ipid-A-disaccharide synthase; Provisional | 98.88 | |
| PRK09922 | 359 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D | 98.87 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related | 98.86 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related | 98.86 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltran | 98.84 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to | 98.81 | |
| TIGR03568 | 365 | NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, | 98.8 | |
| cd04951 | 360 | GT1_WbdM_like This family is most closely related | 98.8 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related | 98.8 | |
| TIGR02149 | 388 | glgA_Coryne glycogen synthase, Corynebacterium fam | 98.78 | |
| COG1519 | 419 | KdtA 3-deoxy-D-manno-octulosonic-acid transferase | 98.77 | |
| TIGR02470 | 784 | sucr_synth sucrose synthase. This model represents | 98.73 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related | 98.68 | |
| COG0381 | 383 | WecB UDP-N-acetylglucosamine 2-epimerase [Cell env | 98.68 | |
| PLN02846 | 462 | digalactosyldiacylglycerol synthase | 98.67 | |
| PLN02275 | 371 | transferase, transferring glycosyl groups | 98.65 | |
| TIGR03087 | 397 | stp1 sugar transferase, PEP-CTERM/EpsH1 system ass | 98.61 | |
| PF02350 | 346 | Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; | 98.61 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylas | 98.59 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related | 98.59 | |
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system ass | 98.57 | |
| PRK15427 | 406 | colanic acid biosynthesis glycosyltransferase WcaL | 98.52 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related | 98.43 | |
| PRK01021 | 608 | lpxB lipid-A-disaccharide synthase; Reviewed | 98.4 | |
| PF02684 | 373 | LpxB: Lipid-A-disaccharide synthetase; InterPro: I | 98.36 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 98.32 | |
| KOG3349 | 170 | consensus Predicted glycosyltransferase [General f | 98.32 | |
| PRK00654 | 466 | glgA glycogen synthase; Provisional | 98.31 | |
| PLN00142 | 815 | sucrose synthase | 98.27 | |
| cd04950 | 373 | GT1_like_1 Glycosyltransferases catalyze the trans | 98.25 | |
| PLN02501 | 794 | digalactosyldiacylglycerol synthase | 98.25 | |
| TIGR02095 | 473 | glgA glycogen/starch synthases, ADP-glucose type. | 98.25 | |
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is mo | 98.23 | |
| COG0763 | 381 | LpxB Lipid A disaccharide synthetase [Cell envelop | 98.1 | |
| TIGR02918 | 500 | accessory Sec system glycosylation protein GtfA. M | 98.06 | |
| PF13844 | 468 | Glyco_transf_41: Glycosyl transferase family 41; P | 98.06 | |
| PLN02949 | 463 | transferase, transferring glycosyl groups | 97.98 | |
| PLN02316 | 1036 | synthase/transferase | 97.9 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to | 97.88 | |
| PRK10017 | 426 | colanic acid biosynthesis protein; Provisional | 97.75 | |
| PRK14098 | 489 | glycogen synthase; Provisional | 97.75 | |
| COG5017 | 161 | Uncharacterized conserved protein [Function unknow | 97.73 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related | 97.73 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related | 97.71 | |
| PRK14099 | 485 | glycogen synthase; Provisional | 97.66 | |
| PF00534 | 172 | Glycos_transf_1: Glycosyl transferases group 1; In | 97.63 | |
| PRK10125 | 405 | putative glycosyl transferase; Provisional | 97.62 | |
| PRK15484 | 380 | lipopolysaccharide 1,2-N-acetylglucosaminetransfer | 97.55 | |
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases | 97.48 | |
| TIGR02193 | 319 | heptsyl_trn_I lipopolysaccharide heptosyltransfera | 97.32 | |
| KOG4626 | 966 | consensus O-linked N-acetylglucosamine transferase | 97.27 | |
| COG1817 | 346 | Uncharacterized protein conserved in archaea [Func | 97.22 | |
| PRK09814 | 333 | beta-1,6-galactofuranosyltransferase; Provisional | 97.12 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 97.06 | |
| PF13477 | 139 | Glyco_trans_4_2: Glycosyl transferase 4-like | 97.05 | |
| PF13692 | 135 | Glyco_trans_1_4: Glycosyl transferases group 1; PD | 97.03 | |
| PRK10422 | 352 | lipopolysaccharide core biosynthesis protein; Prov | 96.96 | |
| cd03789 | 279 | GT1_LPS_heptosyltransferase Lipopolysaccharide hep | 96.8 | |
| COG3914 | 620 | Spy Predicted O-linked N-acetylglucosamine transfe | 96.78 | |
| PRK10916 | 348 | ADP-heptose:LPS heptosyltransferase II; Provisiona | 96.72 | |
| PF06258 | 311 | Mito_fiss_Elm1: Mitochondrial fission ELM1; InterP | 96.57 | |
| PF06722 | 97 | DUF1205: Protein of unknown function (DUF1205); In | 96.54 | |
| TIGR02201 | 344 | heptsyl_trn_III lipopolysaccharide heptosyltransfe | 96.3 | |
| PRK15490 | 578 | Vi polysaccharide biosynthesis protein TviE; Provi | 96.29 | |
| PF13579 | 160 | Glyco_trans_4_4: Glycosyl transferase 4-like domai | 96.02 | |
| TIGR02195 | 334 | heptsyl_trn_II lipopolysaccharide heptosyltransfer | 96.01 | |
| COG0859 | 334 | RfaF ADP-heptose:LPS heptosyltransferase [Cell env | 95.91 | |
| COG3660 | 329 | Predicted nucleoside-diphosphate-sugar epimerase [ | 95.83 | |
| PF12000 | 171 | Glyco_trans_4_3: Gkycosyl transferase family 4 gro | 95.68 | |
| PRK10964 | 322 | ADP-heptose:LPS heptosyl transferase I; Provisiona | 95.6 | |
| PF13524 | 92 | Glyco_trans_1_2: Glycosyl transferases group 1 | 95.26 | |
| PHA01630 | 331 | putative group 1 glycosyl transferase | 95.21 | |
| PHA01633 | 335 | putative glycosyl transferase group 1 | 95.15 | |
| PF01975 | 196 | SurE: Survival protein SurE; InterPro: IPR002828 T | 95.07 | |
| PRK13932 | 257 | stationary phase survival protein SurE; Provisiona | 93.43 | |
| PRK02261 | 137 | methylaspartate mutase subunit S; Provisional | 93.33 | |
| PF13439 | 177 | Glyco_transf_4: Glycosyltransferase Family 4; PDB: | 93.28 | |
| cd02067 | 119 | B12-binding B12 binding domain (B12-BD). This doma | 93.17 | |
| COG1618 | 179 | Predicted nucleotide kinase [Nucleotide transport | 92.67 | |
| PF08660 | 170 | Alg14: Oligosaccharide biosynthesis protein Alg14 | 92.48 | |
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 92.23 | |
| TIGR02919 | 438 | accessory Sec system glycosyltransferase GtfB. Mem | 91.48 | |
| TIGR00087 | 244 | surE 5'/3'-nucleotidase SurE. E. coli SurE is Reco | 91.26 | |
| PF02951 | 119 | GSH-S_N: Prokaryotic glutathione synthetase, N-ter | 90.49 | |
| PRK13933 | 253 | stationary phase survival protein SurE; Provisiona | 90.11 | |
| COG0496 | 252 | SurE Predicted acid phosphatase [General function | 90.07 | |
| KOG2941 | 444 | consensus Beta-1,4-mannosyltransferase [Posttransl | 88.98 | |
| PRK13935 | 253 | stationary phase survival protein SurE; Provisiona | 88.93 | |
| TIGR02370 | 197 | pyl_corrinoid methyltransferase cognate corrinoid | 88.92 | |
| PRK13934 | 266 | stationary phase survival protein SurE; Provisiona | 88.8 | |
| PF06925 | 169 | MGDG_synth: Monogalactosyldiacylglycerol (MGDG) sy | 88.55 | |
| cd02070 | 201 | corrinoid_protein_B12-BD B12 binding domain of cor | 88.36 | |
| PRK00346 | 250 | surE 5'(3')-nucleotidase/polyphosphatase; Provisio | 87.88 | |
| TIGR02400 | 456 | trehalose_OtsA alpha,alpha-trehalose-phosphate syn | 87.78 | |
| cd01425 | 193 | RPS2 Ribosomal protein S2 (RPS2), involved in form | 87.3 | |
| PF02441 | 129 | Flavoprotein: Flavoprotein; InterPro: IPR003382 Th | 86.37 | |
| COG4370 | 412 | Uncharacterized protein conserved in bacteria [Fun | 86.01 | |
| cd00561 | 159 | CobA_CobO_BtuR ATP:corrinoid adenosyltransferase B | 86.0 | |
| TIGR03713 | 519 | acc_sec_asp1 accessory Sec system protein Asp1. Th | 85.11 | |
| PF00551 | 181 | Formyl_trans_N: Formyl transferase; InterPro: IPR0 | 85.11 | |
| PF02142 | 95 | MGS: MGS-like domain This is a subfamily of this f | 84.44 | |
| PRK05986 | 191 | cob(I)alamin adenolsyltransferase/cobinamide ATP-d | 84.43 | |
| COG1703 | 323 | ArgK Putative periplasmic protein kinase ArgK and | 84.35 | |
| COG0003 | 322 | ArsA Predicted ATPase involved in chromosome parti | 83.82 | |
| PRK13931 | 261 | stationary phase survival protein SurE; Provisiona | 83.79 | |
| cd02071 | 122 | MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 bin | 83.73 | |
| COG0438 | 381 | RfaG Glycosyltransferase [Cell envelope biogenesis | 83.65 | |
| COG0052 | 252 | RpsB Ribosomal protein S2 [Translation, ribosomal | 83.49 | |
| PF02571 | 249 | CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: | 83.16 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 83.14 | |
| PRK08305 | 196 | spoVFB dipicolinate synthase subunit B; Reviewed | 83.05 | |
| PRK08057 | 248 | cobalt-precorrin-6x reductase; Reviewed | 82.98 | |
| PF02374 | 305 | ArsA_ATPase: Anion-transporting ATPase; PDB: 2WOO_ | 82.68 | |
| cd03788 | 460 | GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a | 82.2 | |
| COG2185 | 143 | Sbm Methylmalonyl-CoA mutase, C-terminal domain/su | 82.1 | |
| smart00851 | 90 | MGS MGS-like domain. This domain composes the whol | 81.84 | |
| PRK13982 | 475 | bifunctional SbtC-like/phosphopantothenoylcysteine | 81.77 | |
| PRK05973 | 237 | replicative DNA helicase; Provisional | 80.98 | |
| KOG1111 | 426 | consensus N-acetylglucosaminyltransferase complex, | 80.31 | |
| PRK12311 | 326 | rpsB 30S ribosomal protein S2/unknown domain fusio | 80.08 |
| >PLN02562 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-68 Score=525.54 Aligned_cols=430 Identities=31% Similarity=0.573 Sum_probs=343.2
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCCccc
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDDRKD 96 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 96 (471)
+.||+++|++++||++|++.||+.|+.+|++|||++++.+...+.+.. ...++++|+.+|++.+.. ...+
T Consensus 6 ~~HVVlvPfPaqGHi~PmL~LAk~Las~G~~VT~vtt~~~~~~~~~~~---------~~~~~i~~v~lp~g~~~~-~~~~ 75 (448)
T PLN02562 6 RPKIILVPYPAQGHVTPMLKLASAFLSRGFEPVVITPEFIHRRISATL---------DPKLGITFMSISDGQDDD-PPRD 75 (448)
T ss_pred CcEEEEEcCccccCHHHHHHHHHHHHhCCCEEEEEeCcchhhhhhhcc---------CCCCCEEEEECCCCCCCC-cccc
Confidence 469999999999999999999999999999999999998876665431 112379999999877532 2223
Q ss_pred HHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEEEeCchHHHHHHHhchhhhhhhCC
Q 012083 97 EAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKASIYTSAPGILAMIMNIPKFIEAGI 176 (471)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~ 176 (471)
+..+...+...+.+.++++++++... .++++||+|.+..|+..+|+++|||++.++++++..+..+++++.....+.
T Consensus 76 ~~~l~~a~~~~~~~~l~~ll~~l~~~---~pv~cvI~D~~~~w~~~vA~~~giP~~~f~~~~a~~~~~~~~~~~~~~~~~ 152 (448)
T PLN02562 76 FFSIENSMENTMPPQLERLLHKLDED---GEVACMVVDLLASWAIGVADRCGVPVAGFWPVMLAAYRLIQAIPELVRTGL 152 (448)
T ss_pred HHHHHHHHHHhchHHHHHHHHHhcCC---CCcEEEEECCccHhHHHHHHHhCCCEEEEechhHHHHHHHHHHHHHhhccc
Confidence 44555555556888899998876431 245999999999999999999999999999999988887777665443332
Q ss_pred CCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhchhhhh--------
Q 012083 177 ISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSANK-------- 248 (471)
Q Consensus 177 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~-------- 248 (471)
.+..+.+...+.+..+|+++.++..+++ .++..........+.+.+..+...+++.+++||+.+||+....
T Consensus 153 ~~~~~~~~~~~~~~~~Pg~~~l~~~dl~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~ 231 (448)
T PLN02562 153 ISETGCPRQLEKICVLPEQPLLSTEDLP-WLIGTPKARKARFKFWTRTLERTKSLRWILMNSFKDEEYDDVKNHQASYNN 231 (448)
T ss_pred cccccccccccccccCCCCCCCChhhCc-chhcCCCcchHHHHHHHHHHhccccCCEEEEcChhhhCHHHHHHHHhhhcc
Confidence 2211112111223367888888888888 4332221122234445555566778999999999999985333
Q ss_pred -hCCCcceeccccCCCCCC---CCCCcCcchhcccccCCCCCcEEEEecCccc-cCCHHHHHHHHHHHHhCCCCEEEEEc
Q 012083 249 -ILPSIIPVGPLIANGQPT---GNFWSEDLTCLSWLDKQPPGSVIYAAFGSIS-KLSQQQFNELALGLELAGQPFLCGVR 323 (471)
Q Consensus 249 -~~~~~~~vGp~~~~~~~~---~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~-~~~~~~~~~~~~al~~~~~~~i~~~~ 323 (471)
..+++++|||++...... ...++.+.+|.+||+.++++++|||||||+. ..+.+++.+++.+|++++++|||+++
T Consensus 232 ~~~~~v~~iGpl~~~~~~~~~~~~~~~~~~~c~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~l~~~l~~~g~~fiW~~~ 311 (448)
T PLN02562 232 GQNPQILQIGPLHNQEATTITKPSFWEEDMSCLGWLQEQKPNSVIYISFGSWVSPIGESNVRTLALALEASGRPFIWVLN 311 (448)
T ss_pred ccCCCEEEecCcccccccccCCCccccchHHHHHHHhcCCCCceEEEEecccccCCCHHHHHHHHHHHHHCCCCEEEEEc
Confidence 246899999998754211 1123456678899999988889999999985 67899999999999999999999997
Q ss_pred CCCCCCCCCCCCchhHHhhCCCcEEEeccchhhhhccCcceeeeeccCcchhhHhhhcCCceeecccccchhhhHHHHHh
Q 012083 324 PGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICD 403 (471)
Q Consensus 324 ~~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~ 403 (471)
.. ....+|++|.++.++|+++++|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||+++++
T Consensus 312 ~~----~~~~l~~~~~~~~~~~~~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~ 387 (448)
T PLN02562 312 PV----WREGLPPGYVERVSKQGKVVSWAPQLEVLKHQAVGCYLTHCGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVD 387 (448)
T ss_pred CC----chhhCCHHHHHHhccCEEEEecCCHHHHhCCCccceEEecCcchhHHHHHHcCCCEEeCCcccchHHHHHHHHH
Confidence 53 22358889999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred hhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHh
Q 012083 404 DWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKELAQKSVTKEGSSSKNLEYFIKQIT 470 (471)
Q Consensus 404 ~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~ 470 (471)
.+|+|+.+. .++.++|.++|+++|.|++||+||++++++++++ .+||||++++++||++++
T Consensus 388 ~~g~g~~~~-----~~~~~~l~~~v~~~l~~~~~r~~a~~l~~~~~~~-~~gGSS~~nl~~~v~~~~ 448 (448)
T PLN02562 388 VWKIGVRIS-----GFGQKEVEEGLRKVMEDSGMGERLMKLRERAMGE-EARLRSMMNFTTLKDELK 448 (448)
T ss_pred HhCceeEeC-----CCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhc-CCCCCHHHHHHHHHHHhC
Confidence 469998883 4799999999999999999999999999999887 668999999999999875
|
|
| >PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-67 Score=513.50 Aligned_cols=431 Identities=27% Similarity=0.451 Sum_probs=340.9
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCC-Ccc
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPED-DRK 95 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~ 95 (471)
+.||+++|++++||++|++.||+.|+.+|+.|||++++.+.... . ....+++|..+|+++++.. ...
T Consensus 7 ~~HVvlvPfpaqGHi~P~l~LAk~La~~G~~VT~v~T~~n~~~~--~----------~~~~~i~~~~ip~glp~~~~~~~ 74 (451)
T PLN02410 7 RRRVVLVPVPAQGHISPMMQLAKTLHLKGFSITIAQTKFNYFSP--S----------DDFTDFQFVTIPESLPESDFKNL 74 (451)
T ss_pred CCEEEEECCCccccHHHHHHHHHHHHcCCCEEEEEeCccccccc--c----------cCCCCeEEEeCCCCCCccccccc
Confidence 57999999999999999999999999999999999998764210 0 1113699999998887641 222
Q ss_pred cHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEEEeCchHHHHHHHhchhhhhhhC
Q 012083 96 DEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKASIYTSAPGILAMIMNIPKFIEAG 175 (471)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~ 175 (471)
....++..+...+.+.++++++++..... .++++||+|.+..|+..+|+++|||++.+++++++.+..+++.+..+..+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~L~~l~~~~~-~p~~cVI~D~f~~Wa~dvA~~lgIP~v~F~t~~a~~~~~~~~~~~~~~~~ 153 (451)
T PLN02410 75 GPIEFLHKLNKECQVSFKDCLGQLVLQQG-NEIACVVYDEFMYFAEAAAKEFKLPNVIFSTTSATAFVCRSVFDKLYANN 153 (451)
T ss_pred CHHHHHHHHHHHhHHHHHHHHHHHHhccC-CCcEEEEECCcchHHHHHHHHcCCCEEEEEccCHHHHHHHHHHHHHHhcc
Confidence 34466666666778888888887642111 46799999999999999999999999999999999888777655544332
Q ss_pred C-CCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhchhhhhhC----
Q 012083 176 I-ISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSANKIL---- 250 (471)
Q Consensus 176 ~-~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~---- 250 (471)
. .+.... ..+....+|++++++..+++ .+.... ...+...+... ....+++.+++||+.+||+......
T Consensus 154 ~~~~~~~~--~~~~~~~iPg~~~~~~~dlp-~~~~~~--~~~~~~~~~~~-~~~~~~~~vlvNTf~eLE~~~~~~l~~~~ 227 (451)
T PLN02410 154 VLAPLKEP--KGQQNELVPEFHPLRCKDFP-VSHWAS--LESIMELYRNT-VDKRTASSVIINTASCLESSSLSRLQQQL 227 (451)
T ss_pred CCCCcccc--ccCccccCCCCCCCChHHCc-chhcCC--cHHHHHHHHHH-hhcccCCEEEEeChHHhhHHHHHHHHhcc
Confidence 1 110110 01122357888888888877 332211 11122222222 2346799999999999998766553
Q ss_pred -CCcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCC
Q 012083 251 -PSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELAGQPFLCGVRPGFING 329 (471)
Q Consensus 251 -~~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~ 329 (471)
+++++|||++............+.+|.+||+.+++++||||||||+...+.+++.+++.+|+.++.+|||+++.....+
T Consensus 228 ~~~v~~vGpl~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gLe~s~~~FlWv~r~~~~~~ 307 (451)
T PLN02410 228 QIPVYPIGPLHLVASAPTSLLEENKSCIEWLNKQKKNSVIFVSLGSLALMEINEVMETASGLDSSNQQFLWVIRPGSVRG 307 (451)
T ss_pred CCCEEEecccccccCCCccccccchHHHHHHHhCCCCcEEEEEccccccCCHHHHHHHHHHHHhcCCCeEEEEccCcccc
Confidence 5799999998643211111223456889999998889999999999999999999999999999999999998431111
Q ss_pred --CCCCCCchhHHhhCCCcEEEeccchhhhhccCcceeeeeccCcchhhHhhhcCCceeecccccchhhhHHHHHhhhcc
Q 012083 330 --SSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKI 407 (471)
Q Consensus 330 --~~~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~ 407 (471)
....+|++|.+++++|+++++|+||.+||+|+++++|||||||||++||+++|||||++|++.||+.||+++++.+|+
T Consensus 308 ~~~~~~lp~~f~er~~~~g~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~ 387 (451)
T PLN02410 308 SEWIESLPKEFSKIISGRGYIVKWAPQKEVLSHPAVGGFWSHCGWNSTLESIGEGVPMICKPFSSDQKVNARYLECVWKI 387 (451)
T ss_pred cchhhcCChhHHHhccCCeEEEccCCHHHHhCCCccCeeeecCchhHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCe
Confidence 123489999999999999999999999999999999999999999999999999999999999999999999885699
Q ss_pred eeeecCCCCCCcCHhHHHHHHHHHhCcH---HHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHh
Q 012083 408 GLWLEPDDNGIIGRHEIKRKVDELLSND---VVRKNALKLKELAQKSVTKEGSSSKNLEYFIKQIT 470 (471)
Q Consensus 408 G~~~~~~~~~~~~~~~l~~~i~~ll~~~---~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~ 470 (471)
|+.+. ..+++++|.++|+++|.++ +||+||+++++++++++.+||||+.++.+||++++
T Consensus 388 G~~~~----~~~~~~~v~~av~~lm~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~fv~~~~ 449 (451)
T PLN02410 388 GIQVE----GDLDRGAVERAVKRLMVEEEGEEMRKRAISLKEQLRASVISGGSSHNSLEEFVHFMR 449 (451)
T ss_pred eEEeC----CcccHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 99995 5689999999999999875 79999999999999999999999999999999875
|
|
| >PLN02555 limonoid glucosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-66 Score=511.07 Aligned_cols=447 Identities=31% Similarity=0.504 Sum_probs=346.0
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCC-CCcc
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPE-DDRK 95 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~ 95 (471)
+.||+++|+|++||++|++.||+.|+.+|..|||++++.+...+.+.....-..........++|..+|++++.. +...
T Consensus 7 ~~HVv~~PfpaqGHi~Pml~lA~~La~~G~~vT~v~T~~~~~~~~~a~~~~~~~~~~~~~~~i~~~~~pdglp~~~~~~~ 86 (480)
T PLN02555 7 LVHVMLVSFPGQGHVNPLLRLGKLLASKGLLVTFVTTESWGKKMRQANKIQDGVLKPVGDGFIRFEFFEDGWAEDDPRRQ 86 (480)
T ss_pred CCEEEEECCcccccHHHHHHHHHHHHhCCCeEEEEeccchhhhhhccccccccccccCCCCeEEEeeCCCCCCCCccccc
Confidence 579999999999999999999999999999999999997666554210000000000112247888788877654 2233
Q ss_pred cHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEEEeCchHHHHHHHhchhhhhhhC
Q 012083 96 DEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKASIYTSAPGILAMIMNIPKFIEAG 175 (471)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~ 175 (471)
++..++..+...+.+.++++++.+.... .+++|||+|.++.|+..+|+++|||.+.+++++++.+..+++++ .+
T Consensus 87 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~--~pv~ciV~D~~~~wa~~vA~~~gIP~~~F~t~~a~~~~~~~~~~----~~ 160 (480)
T PLN02555 87 DLDLYLPQLELVGKREIPNLVKRYAEQG--RPVSCLINNPFIPWVCDVAEELGIPSAVLWVQSCACFSAYYHYY----HG 160 (480)
T ss_pred CHHHHHHHHHHhhhHHHHHHHHHHhccC--CCceEEEECCcchHHHHHHHHcCCCeEEeecccHHHHHHHHHHh----hc
Confidence 4555666666677888999988764322 34599999999999999999999999999999999888877753 22
Q ss_pred CCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhchhhhhhC---CC
Q 012083 176 IISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSANKIL---PS 252 (471)
Q Consensus 176 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~---~~ 252 (471)
..+.......... ..+|++|.++..+++ .++........+.+.+.+..+...+++.+++||+.+||....... .+
T Consensus 161 ~~~~~~~~~~~~~-~~iPglp~l~~~dlp-~~~~~~~~~~~~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~~~~l~~~~~ 238 (480)
T PLN02555 161 LVPFPTETEPEID-VQLPCMPLLKYDEIP-SFLHPSSPYPFLRRAILGQYKNLDKPFCILIDTFQELEKEIIDYMSKLCP 238 (480)
T ss_pred CCCcccccCCCce-eecCCCCCcCHhhCc-ccccCCCCchHHHHHHHHHHHhcccCCEEEEEchHHHhHHHHHHHhhCCC
Confidence 1110000001111 258999989999998 444322122233444445555678899999999999998766543 24
Q ss_pred cceeccccCCCCC--C---CCCCcCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHHHHhCCCCEEEEEcCCCC
Q 012083 253 IIPVGPLIANGQP--T---GNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELAGQPFLCGVRPGFI 327 (471)
Q Consensus 253 ~~~vGp~~~~~~~--~---~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~ 327 (471)
++.|||+...... . ...+..+.+|.+||+.+++++||||||||+...+.+++.+++.+|+.++++|||++++...
T Consensus 239 v~~iGPl~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~~l~~~~~~flW~~~~~~~ 318 (480)
T PLN02555 239 IKPVGPLFKMAKTPNSDVKGDISKPADDCIEWLDSKPPSSVVYISFGTVVYLKQEQIDEIAYGVLNSGVSFLWVMRPPHK 318 (480)
T ss_pred EEEeCcccCccccccccccccccccchhHHHHHhCCCCCceeEEEeccccCCCHHHHHHHHHHHHhcCCeEEEEEecCcc
Confidence 8999999754211 0 1113345789999999988889999999999999999999999999999999999974311
Q ss_pred C--CCCCCCCchhHHhhCCCcEEEeccchhhhhccCcceeeeeccCcchhhHhhhcCCceeecccccchhhhHHHHHhhh
Q 012083 328 N--GSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDW 405 (471)
Q Consensus 328 ~--~~~~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~ 405 (471)
. .....+|+++.+++++|+++++|+||.+||+|++|++|||||||||++||+++|||||++|++.||+.||+++++.|
T Consensus 319 ~~~~~~~~lp~~~~~~~~~~g~v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~ 398 (480)
T PLN02555 319 DSGVEPHVLPEEFLEKAGDKGKIVQWCPQEKVLAHPSVACFVTHCGWNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVF 398 (480)
T ss_pred cccchhhcCChhhhhhcCCceEEEecCCHHHHhCCCccCeEEecCCcchHHHHHHcCCCEEeCCCccccHHHHHHHHHHh
Confidence 1 11235889999999999999999999999999999999999999999999999999999999999999999999867
Q ss_pred cceeeecCC--CCCCcCHhHHHHHHHHHhCcH---HHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHhC
Q 012083 406 KIGLWLEPD--DNGIIGRHEIKRKVDELLSND---VVRKNALKLKELAQKSVTKEGSSSKNLEYFIKQITE 471 (471)
Q Consensus 406 G~G~~~~~~--~~~~~~~~~l~~~i~~ll~~~---~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~~ 471 (471)
|+|+.+... ....+++++|.++|+++|.++ ++|+||++|+++.++++.+||||++++.+||+++++
T Consensus 399 gvGv~l~~~~~~~~~v~~~~v~~~v~~vm~~~~g~~~r~ra~~l~~~a~~A~~egGSS~~~l~~~v~~i~~ 469 (480)
T PLN02555 399 KTGVRLCRGEAENKLITREEVAECLLEATVGEKAAELKQNALKWKEEAEAAVAEGGSSDRNFQEFVDKLVR 469 (480)
T ss_pred CceEEccCCccccCcCcHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHh
Confidence 999999421 124689999999999999764 799999999999999999999999999999999863
|
|
| >PLN02173 UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-66 Score=506.69 Aligned_cols=424 Identities=29% Similarity=0.532 Sum_probs=339.2
Q ss_pred cCCCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCC-
Q 012083 13 LNKTNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPE- 91 (471)
Q Consensus 13 m~~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~- 91 (471)
|++++.||+++|++++||++|++.||+.|+.+|+.|||++++.+...+... ..++++|+.+|++++..
T Consensus 1 ~~~~~~hvv~~P~paqGHi~P~l~lAk~La~~G~~vT~v~t~~~~~~~~~~-----------~~~~i~~~~ipdglp~~~ 69 (449)
T PLN02173 1 MEKMRGHVLAVPFPSQGHITPIRQFCKRLHSKGFKTTHTLTTFIFNTIHLD-----------PSSPISIATISDGYDQGG 69 (449)
T ss_pred CCCCCcEEEEecCcccccHHHHHHHHHHHHcCCCEEEEEECCchhhhcccC-----------CCCCEEEEEcCCCCCCcc
Confidence 667788999999999999999999999999999999999999865544221 11369999999988763
Q ss_pred -CCcccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCe-eEEEECCCcchHHHHHHHcCCceEEEeCchHHHHHHHhchh
Q 012083 92 -DDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKI-TCVIADVTFGWALQVAAKLELKKASIYTSAPGILAMIMNIP 169 (471)
Q Consensus 92 -~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~p-D~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p 169 (471)
+...+...++..+...+.+.++++++.+... .+| +|||+|.+..|+..+|+++|||.+.+++++++....+++ +
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~Pv~cvV~D~f~~Wa~dVA~elgIP~v~F~~~~a~~~~~~~~-~ 145 (449)
T PLN02173 70 FSSAGSVPEYLQNFKTFGSKTVADIIRKHQST---DNPITCIVYDSFMPWALDLAREFGLAAAPFFTQSCAVNYINYL-S 145 (449)
T ss_pred cccccCHHHHHHHHHHhhhHHHHHHHHHhhcc---CCCceEEEECCcchhHHHHHHHhCCCEEEEechHHHHHHHHHh-H
Confidence 2233456777777777888999999876432 245 999999999999999999999999999988777655443 1
Q ss_pred hhhhhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhchhhhhh
Q 012083 170 KFIEAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSANKI 249 (471)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~ 249 (471)
... .+ .....+|++|.++..+++ .++............+.+......+++.+++||+.+||+.....
T Consensus 146 ~~~-~~-----------~~~~~~pg~p~l~~~dlp-~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~ 212 (449)
T PLN02173 146 YIN-NG-----------SLTLPIKDLPLLELQDLP-TFVTPTGSHLAYFEMVLQQFTNFDKADFVLVNSFHDLDLHENEL 212 (449)
T ss_pred Hhc-cC-----------CccCCCCCCCCCChhhCC-hhhcCCCCchHHHHHHHHHHhhhccCCEEEEeCHHHhhHHHHHH
Confidence 111 00 011236888888888888 44332222222334444555667889999999999999876655
Q ss_pred C---CCcceeccccCCC-------CCCC---CCC--cCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHHHHhC
Q 012083 250 L---PSIIPVGPLIANG-------QPTG---NFW--SEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELA 314 (471)
Q Consensus 250 ~---~~~~~vGp~~~~~-------~~~~---~~~--~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~ 314 (471)
. ++++.|||+.+.. .... +.+ ..+.+|.+||+.++++++|||||||+...+.+++.+++.+| .
T Consensus 213 ~~~~~~v~~VGPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~WLd~~~~~svvyvsfGS~~~~~~~~~~ela~gL--s 290 (449)
T PLN02173 213 LSKVCPVLTIGPTVPSMYLDQQIKSDNDYDLNLFDLKEAALCTDWLDKRPQGSVVYIAFGSMAKLSSEQMEEIASAI--S 290 (449)
T ss_pred HHhcCCeeEEcccCchhhccccccccccccccccccccchHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHh--c
Confidence 4 4799999997421 0000 011 22456999999999899999999999999999999999999 6
Q ss_pred CCCEEEEEcCCCCCCCCCCCCchhHHhh-CCCcEEEeccchhhhhccCcceeeeeccCcchhhHhhhcCCceeecccccc
Q 012083 315 GQPFLCGVRPGFINGSSTNNPDGLVAKV-ADFGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHD 393 (471)
Q Consensus 315 ~~~~i~~~~~~~~~~~~~~lp~~~~~~~-~~nv~~~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~D 393 (471)
+.+|+|+++.. ....+|++|.+++ ++|+++++|+||.+||+|++|++|||||||||++||+++|||||++|++.|
T Consensus 291 ~~~flWvvr~~----~~~~lp~~~~~~~~~~~~~i~~W~PQ~~iL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~D 366 (449)
T PLN02173 291 NFSYLWVVRAS----EESKLPPGFLETVDKDKSLVLKWSPQLQVLSNKAIGCFMTHCGWNSTMEGLSLGVPMVAMPQWTD 366 (449)
T ss_pred CCCEEEEEecc----chhcccchHHHhhcCCceEEeCCCCHHHHhCCCccceEEecCccchHHHHHHcCCCEEecCchhc
Confidence 78899999753 2345888999888 688999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHhhhcceeeecCCC-CCCcCHhHHHHHHHHHhCcH---HHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHH
Q 012083 394 HLYIKSCICDDWKIGLWLEPDD-NGIIGRHEIKRKVDELLSND---VVRKNALKLKELAQKSVTKEGSSSKNLEYFIKQI 469 (471)
Q Consensus 394 Q~~na~~v~~~~G~G~~~~~~~-~~~~~~~~l~~~i~~ll~~~---~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~ 469 (471)
|+.||+++++.||+|+.+..++ ...++.++|.++++++|.|+ ++|+||++++++.++++.+||||++++++||+++
T Consensus 367 Q~~Na~~v~~~~g~Gv~v~~~~~~~~~~~e~v~~av~~vm~~~~~~~~r~~a~~~~~~a~~Av~~gGSS~~~l~~~v~~~ 446 (449)
T PLN02173 367 QPMNAKYIQDVWKVGVRVKAEKESGIAKREEIEFSIKEVMEGEKSKEMKENAGKWRDLAVKSLSEGGSTDININTFVSKI 446 (449)
T ss_pred chHHHHHHHHHhCceEEEeecccCCcccHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHh
Confidence 9999999998679999986432 13479999999999999774 7999999999999999999999999999999987
Q ss_pred h
Q 012083 470 T 470 (471)
Q Consensus 470 ~ 470 (471)
.
T Consensus 447 ~ 447 (449)
T PLN02173 447 Q 447 (449)
T ss_pred c
Confidence 4
|
|
| >PLN02152 indole-3-acetate beta-glucosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-66 Score=504.97 Aligned_cols=429 Identities=26% Similarity=0.464 Sum_probs=338.4
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHh-CCCeEEEEeCCcc-hhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCC-
Q 012083 16 TNVHVLLVSFPAQGHVASLMKLAHRLAD-CRIKVTFVTTEFI-CERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPED- 92 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~~~La~~L~~-rGh~Vt~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~- 92 (471)
++.||+++|++++||++|++.||+.|+. +|+.|||++++.+ .....+.. ...++++|+.++++++...
T Consensus 2 ~~~hvv~~P~p~qGHi~P~l~La~~La~~~G~~vT~v~t~~~~~~~~~~~~---------~~~~~i~~~~i~dglp~g~~ 72 (455)
T PLN02152 2 APPHFLLVTFPAQGHVNPSLRFARRLIKTTGTRVTFATCLSVIHRSMIPNH---------NNVENLSFLTFSDGFDDGVI 72 (455)
T ss_pred CCcEEEEecCcccccHHHHHHHHHHHhhCCCcEEEEEeccchhhhhhhccC---------CCCCCEEEEEcCCCCCCccc
Confidence 4579999999999999999999999996 7999999999854 21111110 1123699999998887652
Q ss_pred -CcccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEEEeCchHHHHHHHhchhhh
Q 012083 93 -DRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKASIYTSAPGILAMIMNIPKF 171 (471)
Q Consensus 93 -~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~ 171 (471)
...+...++......+.+.++++++++...+ .++++||+|.+..|+..+|+++|||.+.+++++++.+..+++++..
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~--~pv~ciV~D~~~~wa~dvA~~lgIP~~~f~t~~a~~~~~~~~~~~~ 150 (455)
T PLN02152 73 SNTDDVQNRLVNFERNGDKALSDFIEANLNGD--SPVTCLIYTILPNWAPKVARRFHLPSVLLWIQPAFVFDIYYNYSTG 150 (455)
T ss_pred cccccHHHHHHHHHHhccHHHHHHHHHhhccC--CCceEEEECCccHhHHHHHHHhCCCEEEEECccHHHHHHHHHhhcc
Confidence 2334555666677788889999998864322 3469999999999999999999999999999999988887764311
Q ss_pred hhhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhc--cCcEEEEcchhhhchhhhhh
Q 012083 172 IEAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIE--ASDRILCTWFHELAPSANKI 249 (471)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~s~~~l~~~~~~~ 249 (471)
......+|+++.++..+++ .++........+...+.+..+... .++.+++||+.+||......
T Consensus 151 --------------~~~~~~iPglp~l~~~dlp-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~ 215 (455)
T PLN02152 151 --------------NNSVFEFPNLPSLEIRDLP-SFLSPSNTNKAAQAVYQELMEFLKEESNPKILVNTFDSLEPEFLTA 215 (455)
T ss_pred --------------CCCeeecCCCCCCchHHCc-hhhcCCCCchhHHHHHHHHHHHhhhccCCEEEEeChHHhhHHHHHh
Confidence 0011257888888888888 544332222223344444444332 35799999999999987776
Q ss_pred C--CCcceeccccCCCC---CC-CC--C-CcCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHHHHhCCCCEEE
Q 012083 250 L--PSIIPVGPLIANGQ---PT-GN--F-WSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELAGQPFLC 320 (471)
Q Consensus 250 ~--~~~~~vGp~~~~~~---~~-~~--~-~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~ 320 (471)
. .+++.|||+.+... .. .. . +..+.++.+||+.+++++||||||||+...+.+++.+++.+|+.++++|||
T Consensus 216 l~~~~v~~VGPL~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flW 295 (455)
T PLN02152 216 IPNIEMVAVGPLLPAEIFTGSESGKDLSVRDQSSSYTLWLDSKTESSVIYVSFGTMVELSKKQIEELARALIEGKRPFLW 295 (455)
T ss_pred hhcCCEEEEcccCccccccccccCccccccccchHHHHHhhCCCCCceEEEEecccccCCHHHHHHHHHHHHHcCCCeEE
Confidence 5 36999999975321 00 01 1 123457999999998889999999999999999999999999999999999
Q ss_pred EEcCCCCC-----CC---CCCCCchhHHhhCCCcEEEeccchhhhhccCcceeeeeccCcchhhHhhhcCCceeeccccc
Q 012083 321 GVRPGFIN-----GS---STNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGH 392 (471)
Q Consensus 321 ~~~~~~~~-----~~---~~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~ 392 (471)
++++.... +. ...+|++|.+++++|+++++|+||.+||+|+++++|||||||||++||+++|||||++|++.
T Consensus 296 v~r~~~~~~~~~~~~~~~~~~~~~~f~e~~~~~g~v~~W~PQ~~iL~h~~vg~fvtH~G~nS~~Ea~~~GvP~l~~P~~~ 375 (455)
T PLN02152 296 VITDKLNREAKIEGEEETEIEKIAGFRHELEEVGMIVSWCSQIEVLRHRAVGCFVTHCGWSSSLESLVLGVPVVAFPMWS 375 (455)
T ss_pred EEecCcccccccccccccccccchhHHHhccCCeEEEeeCCHHHHhCCcccceEEeeCCcccHHHHHHcCCCEEeccccc
Confidence 99753111 01 11257899999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcH--HHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHh
Q 012083 393 DHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSND--VVRKNALKLKELAQKSVTKEGSSSKNLEYFIKQIT 470 (471)
Q Consensus 393 DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~--~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~ 470 (471)
||+.||+++++.||+|+.+..+..+.++.++|.++|+++|+|+ +||+||++++++.++++.+||||++++++||++++
T Consensus 376 DQ~~na~~~~~~~~~G~~~~~~~~~~~~~e~l~~av~~vm~~~~~~~r~~a~~~~~~~~~a~~~ggsS~~nl~~li~~i~ 455 (455)
T PLN02152 376 DQPANAKLLEEIWKTGVRVRENSEGLVERGEIRRCLEAVMEEKSVELRESAEKWKRLAIEAGGEGGSSDKNVEAFVKTLC 455 (455)
T ss_pred cchHHHHHHHHHhCceEEeecCcCCcCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHhC
Confidence 9999999999856777777543234579999999999999875 59999999999999999999999999999999874
|
|
| >PLN02207 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-65 Score=502.79 Aligned_cols=439 Identities=22% Similarity=0.376 Sum_probs=333.3
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCC--CeEEEEeCCcch-hhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCC-
Q 012083 16 TNVHVLLVSFPAQGHVASLMKLAHRLADCR--IKVTFVTTEFIC-ERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPE- 91 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rG--h~Vt~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~- 91 (471)
++.||+++|++++||++|++.||+.|+.+| ..|||++++.+. ..+...... . ....++++|+.+|+.....
T Consensus 2 ~~~hvv~~P~p~qGHi~P~l~lA~~La~~gg~~~vT~~~t~~~~~~~~~~~~~~-~----~~~~~~i~~~~lp~~~~~~~ 76 (468)
T PLN02207 2 RNAELIFIPTPTVGHLVPFLEFARRLIEQDDRIRITILLMKLQGQSHLDTYVKS-I----ASSQPFVRFIDVPELEEKPT 76 (468)
T ss_pred CCcEEEEeCCcchhhHHHHHHHHHHHHhCCCCeEEEEEEcCCCcchhhHHhhhh-c----cCCCCCeEEEEeCCCCCCCc
Confidence 668999999999999999999999999998 999999998765 222221110 0 0112369999999644211
Q ss_pred -CCcccHHHHHHHHHhhccHH----HHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEEEeCchHHHHHHHh
Q 012083 92 -DDRKDEAKMTRSISKVMPGY----LEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKASIYTSAPGILAMIM 166 (471)
Q Consensus 92 -~~~~~~~~~~~~~~~~~~~~----~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~ 166 (471)
+...+...++......+.+. +.+++++..... .+++|||+|.++.|+..+|+++|||.+.++++++..+..+.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~pv~cvV~D~~~~w~~~vA~~~gip~~~f~~~~a~~~~~~~ 154 (468)
T PLN02207 77 LGGTQSVEAYVYDVIEKNIPLVRNIVMDILSSLALDG--VKVKGFVADFFCLPMIDVAKDVSLPFYVFLTTNSGFLAMMQ 154 (468)
T ss_pred cccccCHHHHHHHHHHhcchhHHHHHHHHHHHhccCC--CCeEEEEECCcchHHHHHHHHhCCCEEEEECccHHHHHHHH
Confidence 12234444444444455443 444444321111 23499999999999999999999999999999998888877
Q ss_pred chhhhhhhCCCCCCcccccccccccCCCC-CCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhchh
Q 012083 167 NIPKFIEAGIISSDGIVIKNEKIELSPYL-PAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPS 245 (471)
Q Consensus 167 ~~p~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~ 245 (471)
+.+......... ..+..+ ....+|++ +.++..+++ .++..... ...+.+......+++.+++||+++||++
T Consensus 155 ~~~~~~~~~~~~--~~~~~~-~~~~vPgl~~~l~~~dlp-~~~~~~~~----~~~~~~~~~~~~~~~~vlvNtf~~LE~~ 226 (468)
T PLN02207 155 YLADRHSKDTSV--FVRNSE-EMLSIPGFVNPVPANVLP-SALFVEDG----YDAYVKLAILFTKANGILVNSSFDIEPY 226 (468)
T ss_pred Hhhhcccccccc--CcCCCC-CeEECCCCCCCCChHHCc-chhcCCcc----HHHHHHHHHhcccCCEEEEEchHHHhHH
Confidence 765432110000 001111 22358998 678898888 43322111 2333444456788999999999999987
Q ss_pred hh------hhCCCcceeccccCCCCCCCC--CCcCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHHHHhCCCC
Q 012083 246 AN------KILPSIIPVGPLIANGQPTGN--FWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELAGQP 317 (471)
Q Consensus 246 ~~------~~~~~~~~vGp~~~~~~~~~~--~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~ 317 (471)
.. +..|+++.|||++........ ....+.+|.+||++++++++|||||||+...+.+++.+++.+|+.++++
T Consensus 227 ~~~~~~~~~~~p~v~~VGPl~~~~~~~~~~~~~~~~~~~~~WLd~~~~~sVVyvSfGS~~~~~~~q~~ela~~l~~~~~~ 306 (468)
T PLN02207 227 SVNHFLDEQNYPSVYAVGPIFDLKAQPHPEQDLARRDELMKWLDDQPEASVVFLCFGSMGRLRGPLVKEIAHGLELCQYR 306 (468)
T ss_pred HHHHHHhccCCCcEEEecCCcccccCCCCccccchhhHHHHHHhcCCCCcEEEEEeccCcCCCHHHHHHHHHHHHHCCCc
Confidence 33 345789999999864321111 0113367999999998889999999999999999999999999999999
Q ss_pred EEEEEcCCCCCCCCCCCCchhHHhhCCCcEEEeccchhhhhccCcceeeeeccCcchhhHhhhcCCceeecccccchhhh
Q 012083 318 FLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYI 397 (471)
Q Consensus 318 ~i~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~n 397 (471)
|||++++.. ....+.+|++|.+++++|+++++|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.|
T Consensus 307 flW~~r~~~-~~~~~~lp~~f~er~~~~g~i~~W~PQ~~IL~H~~vg~FvTH~GwnS~~Eai~~GVP~l~~P~~~DQ~~N 385 (468)
T PLN02207 307 FLWSLRTEE-VTNDDLLPEGFLDRVSGRGMICGWSPQVEILAHKAVGGFVSHCGWNSIVESLWFGVPIVTWPMYAEQQLN 385 (468)
T ss_pred EEEEEeCCC-ccccccCCHHHHhhcCCCeEEEEeCCHHHHhcccccceeeecCccccHHHHHHcCCCEEecCccccchhh
Confidence 999998531 1123458999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcceeeecCC----CCCCcCHhHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHh
Q 012083 398 KSCICDDWKIGLWLEPD----DNGIIGRHEIKRKVDELLS--NDVVRKNALKLKELAQKSVTKEGSSSKNLEYFIKQIT 470 (471)
Q Consensus 398 a~~v~~~~G~G~~~~~~----~~~~~~~~~l~~~i~~ll~--~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~ 470 (471)
|+++++.+|+|+.+..+ ....++.++|.++|+++|. +++||+||+++++.+++++.+||||++++++||++++
T Consensus 386 a~~~~~~~gvGv~~~~~~~~~~~~~v~~e~i~~av~~vm~~~~~~~r~~a~~l~~~a~~A~~~GGSS~~~l~~~v~~~~ 464 (468)
T PLN02207 386 AFLMVKELKLAVELKLDYRVHSDEIVNANEIETAIRCVMNKDNNVVRKRVMDISQMIQRATKNGGSSFAAIEKFIHDVI 464 (468)
T ss_pred HHHHHHHhCceEEEecccccccCCcccHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Confidence 99877658999977421 1235699999999999997 6799999999999999999999999999999999885
|
|
| >PLN02554 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-65 Score=507.83 Aligned_cols=440 Identities=22% Similarity=0.384 Sum_probs=330.1
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCC--CeEEEEeCCcchhhhH--HhhhcCCCCccCCCCCCeEEEeCCCCCCCCC
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADCR--IKVTFVTTEFICERIK--ESRQLGSFSEMGDAQQLVRIVPLPDGLEPED 92 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~rG--h~Vt~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 92 (471)
|+||+++|++++||++|++.||+.|+.+| ..|||++++.+..... +...... .....++++|+.+|++.++..
T Consensus 2 ~~hvvl~P~paqGHi~P~l~LAk~La~~G~~~~vT~v~t~~~~~~~~~~~~~~~~~---~~~~~~~i~~~~lp~~~~~~~ 78 (481)
T PLN02554 2 KIELVFIPSPGIGHLRPTVELAKLLVDSDDRLSITVIIIPSRSGDDASSSAYIASL---SASSEDRLRYEVISAGDQPTT 78 (481)
T ss_pred ceEEEEeCCcchhhHHHHHHHHHHHHhCCCCEEEEEEeCCCccchhhhhhhhhhhc---ccCCCCCeEEEEcCCCCCCcc
Confidence 68999999999999999999999999998 8899999987654221 1000000 001123699999997764221
Q ss_pred CcccHHHHHHHHHhhccHHHHHHHHHHhcc-c-CCCC-eeEEEECCCcchHHHHHHHcCCceEEEeCchHHHHHHHhchh
Q 012083 93 DRKDEAKMTRSISKVMPGYLEELIQKINQQ-E-EDEK-ITCVIADVTFGWALQVAAKLELKKASIYTSAPGILAMIMNIP 169 (471)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~-~-~~~~-pD~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p 169 (471)
....+.. +...+.+.+++.++++... . .+.+ .+|||+|.++.|+..+|+++|||++.++++++..+..+++++
T Consensus 79 ~~~~~~~----~~~~~~~~~~~~l~~l~~~~~~~~~~pv~cvV~D~f~~wa~dvA~~lgIP~~~F~t~sa~~~~~~~~~~ 154 (481)
T PLN02554 79 EDPTFQS----YIDNQKPKVRDAVAKLVDDSSTPSSPRLAGFVVDMFCTSMIDVANEFGVPSYMFYTSNATFLGLQLHVQ 154 (481)
T ss_pred cchHHHH----HHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEECCcchhHHHHHHHhCCCEEEEeCCcHHHHHHHHhhh
Confidence 1112222 2334455555555554321 0 0023 489999999999999999999999999999999999888876
Q ss_pred hhhhhCCCCCCcccccccccccCCCCC-CCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhchhhhh
Q 012083 170 KFIEAGIISSDGIVIKNEKIELSPYLP-AASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSANK 248 (471)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~ 248 (471)
.....+..+..+.+..... ..+|+++ +++..+++ .+... ......+.+......+++.+++||+.+||.....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~-v~iPgl~~pl~~~dlp-~~~~~----~~~~~~~~~~~~~~~~~~gvlvNt~~eLe~~~~~ 228 (481)
T PLN02554 155 MLYDEKKYDVSELEDSEVE-LDVPSLTRPYPVKCLP-SVLLS----KEWLPLFLAQARRFREMKGILVNTVAELEPQALK 228 (481)
T ss_pred hhccccccCccccCCCCce-eECCCCCCCCCHHHCC-CcccC----HHHHHHHHHHHHhcccCCEEEEechHHHhHHHHH
Confidence 5432211110011111111 2478874 67878887 33321 1223334444556788999999999999986554
Q ss_pred h-------CCCcceeccccC-CCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHHHHhCCCCEEE
Q 012083 249 I-------LPSIIPVGPLIA-NGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELAGQPFLC 320 (471)
Q Consensus 249 ~-------~~~~~~vGp~~~-~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~ 320 (471)
. .+++++|||+.. .........+.+.+|.+|++.+++++||||||||+...+.+++.+++.+|+.++++|||
T Consensus 229 ~l~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~la~~l~~~~~~flW 308 (481)
T PLN02554 229 FFSGSSGDLPPVYPVGPVLHLENSGDDSKDEKQSEILRWLDEQPPKSVVFLCFGSMGGFSEEQAREIAIALERSGHRFLW 308 (481)
T ss_pred HHHhcccCCCCEEEeCCCccccccccccccccchHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHHHHcCCCeEE
Confidence 2 368999999943 22111001233467999999998888999999999999999999999999999999999
Q ss_pred EEcCCCCC----------CCCCCCCchhHHhhCCCcEEEeccchhhhhccCcceeeeeccCcchhhHhhhcCCceeeccc
Q 012083 321 GVRPGFIN----------GSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPW 390 (471)
Q Consensus 321 ~~~~~~~~----------~~~~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~ 390 (471)
+++..... +....+|++|.+++++|+++++|+||.+||+|++|++|||||||||++||+++|||||++|+
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~r~~~~g~v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Ea~~~GVP~l~~P~ 388 (481)
T PLN02554 309 SLRRASPNIMKEPPGEFTNLEEILPEGFLDRTKDIGKVIGWAPQVAVLAKPAIGGFVTHCGWNSILESLWFGVPMAAWPL 388 (481)
T ss_pred EEcCCcccccccccccccchhhhCChHHHHHhccCceEEeeCCHHHHhCCcccCcccccCccchHHHHHHcCCCEEecCc
Confidence 99753110 01123699999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhhhHH-HHHhhhcceeeecCC--------CCCCcCHhHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHhhcCCChHH
Q 012083 391 GHDHLYIKS-CICDDWKIGLWLEPD--------DNGIIGRHEIKRKVDELLS-NDVVRKNALKLKELAQKSVTKEGSSSK 460 (471)
Q Consensus 391 ~~DQ~~na~-~v~~~~G~G~~~~~~--------~~~~~~~~~l~~~i~~ll~-~~~~~~~a~~l~~~~~~~~~~gg~~~~ 460 (471)
++||+.||+ ++++ +|+|+.++.. ....++.++|.++|+++|. |++||+||+++++++++++.+||||+.
T Consensus 389 ~~DQ~~Na~~~v~~-~g~Gv~l~~~~~~~~~~~~~~~~~~e~l~~av~~vm~~~~~~r~~a~~l~~~~~~av~~gGss~~ 467 (481)
T PLN02554 389 YAEQKFNAFEMVEE-LGLAVEIRKYWRGDLLAGEMETVTAEEIERGIRCLMEQDSDVRKRVKEMSEKCHVALMDGGSSHT 467 (481)
T ss_pred cccchhhHHHHHHH-hCceEEeeccccccccccccCeEcHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCChHHH
Confidence 999999995 5667 8999998631 1246899999999999996 789999999999999999999999999
Q ss_pred HHHHHHHHHh
Q 012083 461 NLEYFIKQIT 470 (471)
Q Consensus 461 ~~~~~~~~~~ 470 (471)
++.+||++++
T Consensus 468 ~l~~lv~~~~ 477 (481)
T PLN02554 468 ALKKFIQDVT 477 (481)
T ss_pred HHHHHHHHHH
Confidence 9999999986
|
|
| >PLN02210 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-65 Score=501.38 Aligned_cols=428 Identities=27% Similarity=0.479 Sum_probs=333.6
Q ss_pred CCCcEEEEEcCCCcccHHHHHHHHHH--HHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCC
Q 012083 15 KTNVHVLLVSFPAQGHVASLMKLAHR--LADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPED 92 (471)
Q Consensus 15 ~~~~~Il~~~~~~~GH~~p~~~La~~--L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 92 (471)
.++.||+++|+|++||++|++.||+. |++||++|||++++.+.+.+...+ .....+++..+++++++..
T Consensus 6 ~~~~hvv~~P~pa~GHi~P~l~La~~L~L~~~G~~VT~v~t~~~~~~~~~~~---------~~~~~~~~~~~~~glp~~~ 76 (456)
T PLN02210 6 GQETHVLMVTLAFQGHINPMLKLAKHLSLSSKNLHFTLATTEQARDLLSTVE---------KPRRPVDLVFFSDGLPKDD 76 (456)
T ss_pred CCCCEEEEeCCcccccHHHHHHHHHHHHhhcCCcEEEEEeccchhhhhcccc---------CCCCceEEEECCCCCCCCc
Confidence 34689999999999999999999999 569999999999998876653321 1124688888888777653
Q ss_pred CcccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEEEeCchHHHHHHHhchhhhh
Q 012083 93 DRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKASIYTSAPGILAMIMNIPKFI 172 (471)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~ 172 (471)
. .+...++..+.+.+.+.++++++. .+||+||+|.++.|+..+|+++|||.+.+++.++..+..+.+.+..
T Consensus 77 ~-~~~~~~~~~~~~~~~~~l~~~l~~-------~~~~~vI~D~~~~w~~~vA~~lgIP~~~f~~~sa~~~~~~~~~~~~- 147 (456)
T PLN02210 77 P-RAPETLLKSLNKVGAKNLSKIIEE-------KRYSCIISSPFTPWVPAVAAAHNIPCAILWIQACGAYSVYYRYYMK- 147 (456)
T ss_pred c-cCHHHHHHHHHHhhhHHHHHHHhc-------CCCcEEEECCcchhHHHHHHHhCCCEEEEecccHHHHHHHHhhhhc-
Confidence 2 244456666666666677777765 6899999999999999999999999999999999888776654321
Q ss_pred hhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhchhhhhhC--
Q 012083 173 EAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSANKIL-- 250 (471)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~-- 250 (471)
.+..+.. ...+....+|+++.++..+++ .++.... ...+.....+.......++.+++||+.+||.......
T Consensus 148 -~~~~~~~---~~~~~~~~~Pgl~~~~~~dl~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~ 221 (456)
T PLN02210 148 -TNSFPDL---EDLNQTVELPALPLLEVRDLP-SFMLPSG-GAHFNNLMAEFADCLRYVKWVLVNSFYELESEIIESMAD 221 (456)
T ss_pred -cCCCCcc---cccCCeeeCCCCCCCChhhCC-hhhhcCC-chHHHHHHHHHHHhcccCCEEEEeCHHHHhHHHHHHHhh
Confidence 1111100 000112347888878888887 4332221 1122223333334456789999999999999776653
Q ss_pred -CCcceeccccCC----C-CC---CC---CCCcCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHHHHhCCCCE
Q 012083 251 -PSIIPVGPLIAN----G-QP---TG---NFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELAGQPF 318 (471)
Q Consensus 251 -~~~~~vGp~~~~----~-~~---~~---~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~ 318 (471)
+++++|||+++. . .. .. ..+..+.+|.+|++.+++++||||||||....+.+++.+++.+|+.++++|
T Consensus 222 ~~~v~~VGPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~e~a~~l~~~~~~f 301 (456)
T PLN02210 222 LKPVIPIGPLVSPFLLGDDEEETLDGKNLDMCKSDDCCMEWLDKQARSSVVYISFGSMLESLENQVETIAKALKNRGVPF 301 (456)
T ss_pred cCCEEEEcccCchhhcCcccccccccccccccccchHHHHHHhCCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCE
Confidence 579999999752 1 10 00 012445678999999988899999999999899999999999999999999
Q ss_pred EEEEcCCCCCCCCCCCCchhHHhh-CCCcEEEeccchhhhhccCcceeeeeccCcchhhHhhhcCCceeecccccchhhh
Q 012083 319 LCGVRPGFINGSSTNNPDGLVAKV-ADFGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYI 397 (471)
Q Consensus 319 i~~~~~~~~~~~~~~lp~~~~~~~-~~nv~~~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~n 397 (471)
||+++... ....+..|.+++ ++++.+++|+||.+||+|+++++|||||||||++||+++|||||++|++.||+.|
T Consensus 302 lw~~~~~~----~~~~~~~~~~~~~~~~g~v~~w~PQ~~iL~h~~vg~FitH~G~nS~~Eai~~GVP~v~~P~~~DQ~~n 377 (456)
T PLN02210 302 LWVIRPKE----KAQNVQVLQEMVKEGQGVVLEWSPQEKILSHMAISCFVTHCGWNSTIETVVAGVPVVAYPSWTDQPID 377 (456)
T ss_pred EEEEeCCc----cccchhhHHhhccCCCeEEEecCCHHHHhcCcCcCeEEeeCCcccHHHHHHcCCCEEecccccccHHH
Confidence 99997531 112345566666 4888889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcceeeecCCC-CCCcCHhHHHHHHHHHhCcH---HHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHh
Q 012083 398 KSCICDDWKIGLWLEPDD-NGIIGRHEIKRKVDELLSND---VVRKNALKLKELAQKSVTKEGSSSKNLEYFIKQIT 470 (471)
Q Consensus 398 a~~v~~~~G~G~~~~~~~-~~~~~~~~l~~~i~~ll~~~---~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~ 470 (471)
|+++++.+|+|+.+..++ .+.++.++|.++|+++|.++ ++|+||++|++..++++++||||++++++||++++
T Consensus 378 a~~~~~~~g~G~~l~~~~~~~~~~~~~l~~av~~~m~~~~g~~~r~~a~~l~~~a~~Av~~gGSS~~~l~~~v~~~~ 454 (456)
T PLN02210 378 ARLLVDVFGIGVRMRNDAVDGELKVEEVERCIEAVTEGPAAADIRRRAAELKHVARLALAPGGSSARNLDLFISDIT 454 (456)
T ss_pred HHHHHHHhCeEEEEeccccCCcCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHh
Confidence 999987579999996421 24689999999999999876 49999999999999999999999999999999885
|
|
| >PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-64 Score=499.19 Aligned_cols=439 Identities=26% Similarity=0.388 Sum_probs=329.1
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCC----CCCCCC
Q 012083 16 TNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLP----DGLEPE 91 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~----~~~~~~ 91 (471)
.+.||+++|++++||++|++.||+.|+.+|+.|||++++.+...+.+.. ...++++++.+| ++++.+
T Consensus 8 ~~~HVvl~PfpaqGHi~P~l~LAk~La~~G~~VTfv~T~~n~~~~~~~~---------~~~~~i~~~~lp~P~~~~lPdG 78 (477)
T PLN02863 8 AGTHVLVFPFPAQGHMIPLLDLTHRLALRGLTITVLVTPKNLPFLNPLL---------SKHPSIETLVLPFPSHPSIPSG 78 (477)
T ss_pred CCCEEEEecCcccchHHHHHHHHHHHHhCCCEEEEEeCCCcHHHHhhhc---------ccCCCeeEEeCCCCCcCCCCCC
Confidence 3689999999999999999999999999999999999998877665431 112357777654 133332
Q ss_pred -CCccc----HHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEEEeCchHHHHHHHh
Q 012083 92 -DDRKD----EAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKASIYTSAPGILAMIM 166 (471)
Q Consensus 92 -~~~~~----~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~ 166 (471)
+...+ ....+......+.+.+.+++++. . .+|++||+|.+..|+..+|+++|||++.+++++++.+..++
T Consensus 79 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~---~--~~p~cvI~D~f~~Wa~dVA~e~GIP~~~F~t~sA~~~~~~~ 153 (477)
T PLN02863 79 VENVKDLPPSGFPLMIHALGELYAPLLSWFRSH---P--SPPVAIISDMFLGWTQNLACQLGIRRFVFSPSGAMALSIMY 153 (477)
T ss_pred CcChhhcchhhHHHHHHHHHHhHHHHHHHHHhC---C--CCCeEEEEcCchHhHHHHHHHcCCCEEEEeccCHHHHHHHH
Confidence 11111 11222223334455566666542 1 46899999999999999999999999999999999998888
Q ss_pred chhhhhhhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhchhh
Q 012083 167 NIPKFIEAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSA 246 (471)
Q Consensus 167 ~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~ 246 (471)
+++........+ .-......+..+|+++.++..+++ .+.............+.+.......++.+++||+.+||...
T Consensus 154 ~~~~~~~~~~~~--~~~~~~~~~~~iPg~~~~~~~dlp-~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~ 230 (477)
T PLN02863 154 SLWREMPTKINP--DDQNEILSFSKIPNCPKYPWWQIS-SLYRSYVEGDPAWEFIKDSFRANIASWGLVVNSFTELEGIY 230 (477)
T ss_pred HHhhcccccccc--cccccccccCCCCCCCCcChHhCc-hhhhccCccchHHHHHHHHHhhhccCCEEEEecHHHHHHHH
Confidence 754211100000 000000012347888888888888 43321111112334444444445678889999999999976
Q ss_pred hhhC------CCcceeccccCCCCCC-------CCCCcCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHHHHh
Q 012083 247 NKIL------PSIIPVGPLIANGQPT-------GNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLEL 313 (471)
Q Consensus 247 ~~~~------~~~~~vGp~~~~~~~~-------~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~ 313 (471)
.... ++++.|||+.+..... ......+.+|.+||+.+++++||||||||+...+.+++.+++.+|+.
T Consensus 231 ~~~~~~~~~~~~v~~IGPL~~~~~~~~~~~~~~~~~~~~~~~~~~WLd~~~~~svVyvsfGS~~~~~~~~~~ela~gL~~ 310 (477)
T PLN02863 231 LEHLKKELGHDRVWAVGPILPLSGEKSGLMERGGPSSVSVDDVMTWLDTCEDHKVVYVCFGSQVVLTKEQMEALASGLEK 310 (477)
T ss_pred HHHHHhhcCCCCeEEeCCCcccccccccccccCCcccccHHHHHHHHhcCCCCceEEEEeeceecCCHHHHHHHHHHHHh
Confidence 6553 5799999997533100 00111346799999999888999999999999999999999999999
Q ss_pred CCCCEEEEEcCCCCC-CCCCCCCchhHHhhCCCcE-EEeccchhhhhccCcceeeeeccCcchhhHhhhcCCceeecccc
Q 012083 314 AGQPFLCGVRPGFIN-GSSTNNPDGLVAKVADFGK-MVKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWG 391 (471)
Q Consensus 314 ~~~~~i~~~~~~~~~-~~~~~lp~~~~~~~~~nv~-~~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~ 391 (471)
++++|||+++..... .....+|++|.+++.++.. +.+|+||.+||+|++|++|||||||||++||+++|||||++|++
T Consensus 311 ~~~~flw~~~~~~~~~~~~~~lp~~~~~r~~~~g~~v~~w~PQ~~vL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~ 390 (477)
T PLN02863 311 SGVHFIWCVKEPVNEESDYSNIPSGFEDRVAGRGLVIRGWAPQVAILSHRAVGAFLTHCGWNSVLEGLVAGVPMLAWPMA 390 (477)
T ss_pred CCCcEEEEECCCcccccchhhCCHHHHHHhccCCEEecCCCCHHHHhcCCCcCeEEecCCchHHHHHHHcCCCEEeCCcc
Confidence 999999999853211 1223588999888755554 55999999999999999999999999999999999999999999
Q ss_pred cchhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHh
Q 012083 392 HDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELL-SNDVVRKNALKLKELAQKSVTKEGSSSKNLEYFIKQIT 470 (471)
Q Consensus 392 ~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll-~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~ 470 (471)
.||+.||+++++.+|+|+.+..+....++.+++.++++++| ++++||+||+++++..++++.+||||++++++||++++
T Consensus 391 ~DQ~~na~~v~~~~gvG~~~~~~~~~~~~~~~v~~~v~~~m~~~~~~r~~a~~l~e~a~~Av~~gGSS~~~l~~~v~~i~ 470 (477)
T PLN02863 391 ADQFVNASLLVDELKVAVRVCEGADTVPDSDELARVFMESVSENQVERERAKELRRAALDAIKERGSSVKDLDGFVKHVV 470 (477)
T ss_pred ccchhhHHHHHHhhceeEEeccCCCCCcCHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHH
Confidence 99999999987548999999532123568999999999999 67899999999999999999999999999999999986
Q ss_pred C
Q 012083 471 E 471 (471)
Q Consensus 471 ~ 471 (471)
+
T Consensus 471 ~ 471 (477)
T PLN02863 471 E 471 (477)
T ss_pred H
Confidence 3
|
|
| >PLN02992 coniferyl-alcohol glucosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-64 Score=495.45 Aligned_cols=429 Identities=27% Similarity=0.397 Sum_probs=334.2
Q ss_pred cCCCCcEEEEEcCCCcccHHHHHHHHHHHH-hCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCC----C
Q 012083 13 LNKTNVHVLLVSFPAQGHVASLMKLAHRLA-DCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPD----G 87 (471)
Q Consensus 13 m~~~~~~Il~~~~~~~GH~~p~~~La~~L~-~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~----~ 87 (471)
|-..+.||+++|++++||++|++.||+.|+ .+|+.|||++++.+...+.+.. ...++++++.+|. +
T Consensus 1 ~~~~~pHVvl~P~paqGHi~P~l~LAk~La~~~g~~vT~v~t~~n~~~~~~~~---------~~~~~i~~~~lp~p~~~g 71 (481)
T PLN02992 1 MHITKPHAAMFSSPGMGHVIPVIELGKRLSANHGFHVTVFVLETDAASAQSKF---------LNSTGVDIVGLPSPDISG 71 (481)
T ss_pred CCCCCcEEEEeCCcccchHHHHHHHHHHHHhCCCcEEEEEeCCCchhhhhhcc---------ccCCCceEEECCCccccC
Confidence 334578999999999999999999999998 7899999999998765543321 1112689998885 3
Q ss_pred CCCCCCcccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEEEeCchHHHHHHHhc
Q 012083 88 LEPEDDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKASIYTSAPGILAMIMN 167 (471)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~ 167 (471)
+++.. .+....+......+.+.++++++++. .+|++||+|.++.|+..+|+++|||++.++++++..+..+.+
T Consensus 72 lp~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~-----~~p~cvV~D~f~~Wa~dVA~elgIP~v~F~t~sA~~~~~~~~ 144 (481)
T PLN02992 72 LVDPS--AHVVTKIGVIMREAVPTLRSKIAEMH-----QKPTALIVDLFGTDALCLGGEFNMLTYIFIASNARFLGVSIY 144 (481)
T ss_pred CCCCC--ccHHHHHHHHHHHhHHHHHHHHHhcC-----CCCeEEEECCcchhHHHHHHHcCCCEEEEecCcHHHHHHHHh
Confidence 43221 12223333344456677888887642 478999999999999999999999999999999988877776
Q ss_pred hhhhhhhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhchhhh
Q 012083 168 IPKFIEAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSAN 247 (471)
Q Consensus 168 ~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~ 247 (471)
+|........+ .....+ ...+|+++.++..+++ ..+.... . .....+.+......+++.+++||+.+||....
T Consensus 145 ~~~~~~~~~~~---~~~~~~-~~~iPg~~~l~~~dlp-~~~~~~~-~-~~~~~~~~~~~~~~~a~gvlvNTf~eLE~~~l 217 (481)
T PLN02992 145 YPTLDKDIKEE---HTVQRK-PLAMPGCEPVRFEDTL-DAYLVPD-E-PVYRDFVRHGLAYPKADGILVNTWEEMEPKSL 217 (481)
T ss_pred hhhhccccccc---cccCCC-CcccCCCCccCHHHhh-HhhcCCC-c-HHHHHHHHHHHhcccCCEEEEechHHHhHHHH
Confidence 65432211000 000011 2357888888888887 3222111 1 22334445555667899999999999999777
Q ss_pred hhC-----------CCcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHHHHhCCC
Q 012083 248 KIL-----------PSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELAGQ 316 (471)
Q Consensus 248 ~~~-----------~~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~ 316 (471)
... ++++.|||+.+... ....+.+|.+||+.+++++||||||||+..++.+++.+++.+|+.+++
T Consensus 218 ~~l~~~~~~~~~~~~~v~~VGPl~~~~~----~~~~~~~c~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~ 293 (481)
T PLN02992 218 KSLQDPKLLGRVARVPVYPIGPLCRPIQ----SSKTDHPVLDWLNKQPNESVLYISFGSGGSLSAKQLTELAWGLEMSQQ 293 (481)
T ss_pred HHHhhccccccccCCceEEecCccCCcC----CCcchHHHHHHHHcCCCCceEEEeecccccCCHHHHHHHHHHHHHcCC
Confidence 642 46999999976432 112456799999999888999999999999999999999999999999
Q ss_pred CEEEEEcCCCCC---------------C-CCCCCCchhHHhhCCCcEEE-eccchhhhhccCcceeeeeccCcchhhHhh
Q 012083 317 PFLCGVRPGFIN---------------G-SSTNNPDGLVAKVADFGKMV-KWAPQEKVLAHPSVACYLTHCGWNSTMEGI 379 (471)
Q Consensus 317 ~~i~~~~~~~~~---------------~-~~~~lp~~~~~~~~~nv~~~-~~vpq~~lL~~~~~~~~ItHgG~~s~~eal 379 (471)
+|||+++..... . ....+|++|.+++.++..++ +|+||.+||+|+++++|||||||||++||+
T Consensus 294 ~flW~~r~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~f~eR~~~rg~vv~~W~PQ~~iL~h~~vg~FitH~G~nS~~Eal 373 (481)
T PLN02992 294 RFVWVVRPPVDGSACSAYFSANGGETRDNTPEYLPEGFVSRTHDRGFVVPSWAPQAEILAHQAVGGFLTHCGWSSTLESV 373 (481)
T ss_pred CEEEEEeCCcccccccccccCcccccccchhhhCCHHHHHHhcCCCEEEeecCCHHHHhCCcccCeeEecCchhHHHHHH
Confidence 999999642100 0 12358999999998777655 999999999999999999999999999999
Q ss_pred hcCCceeecccccchhhhHHHHH-hhhcceeeecCCCCCCcCHhHHHHHHHHHhCcH---HHHHHHHHHHHHHHHHhh--
Q 012083 380 SMGVPFLCWPWGHDHLYIKSCIC-DDWKIGLWLEPDDNGIIGRHEIKRKVDELLSND---VVRKNALKLKELAQKSVT-- 453 (471)
Q Consensus 380 ~~GvP~l~~P~~~DQ~~na~~v~-~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~---~~~~~a~~l~~~~~~~~~-- 453 (471)
++|||||++|++.||+.||++++ + +|+|+.++.. ...++.++|.++|+++|.++ ++|++++++++++++++.
T Consensus 374 ~~GVP~l~~P~~~DQ~~na~~~~~~-~g~gv~~~~~-~~~~~~~~l~~av~~vm~~~~g~~~r~~a~~~~~~a~~Av~~~ 451 (481)
T PLN02992 374 VGGVPMIAWPLFAEQNMNAALLSDE-LGIAVRSDDP-KEVISRSKIEALVRKVMVEEEGEEMRRKVKKLRDTAEMSLSID 451 (481)
T ss_pred HcCCCEEecCccchhHHHHHHHHHH-hCeeEEecCC-CCcccHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999996 6 8999999741 14689999999999999763 899999999999999994
Q ss_pred cCCChHHHHHHHHHHHh
Q 012083 454 KEGSSSKNLEYFIKQIT 470 (471)
Q Consensus 454 ~gg~~~~~~~~~~~~~~ 470 (471)
+||||++++++|+++++
T Consensus 452 ~GGSS~~~l~~~v~~~~ 468 (481)
T PLN02992 452 GGGVAHESLCRVTKECQ 468 (481)
T ss_pred CCCchHHHHHHHHHHHH
Confidence 59999999999999875
|
|
| >PLN02448 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-64 Score=497.57 Aligned_cols=427 Identities=28% Similarity=0.481 Sum_probs=335.4
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhC--CCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCC-CC
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADC--RIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPE-DD 93 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~r--Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~ 93 (471)
+.||+++|+|++||++|++.||++|+.+ ||+|||++++.+...+.+.. ...+++|+.+|++.+.. +.
T Consensus 10 ~~hVvlvp~pa~GHi~P~l~LA~~L~~~~~G~~VT~~~t~~~~~~i~~~~----------~~~gi~fv~lp~~~p~~~~~ 79 (459)
T PLN02448 10 SCHVVAMPYPGRGHINPMMNLCKLLASRKPDILITFVVTEEWLGLIGSDP----------KPDNIRFATIPNVIPSELVR 79 (459)
T ss_pred CcEEEEECCcccccHHHHHHHHHHHHcCCCCcEEEEEeCCchHhHhhccC----------CCCCEEEEECCCCCCCcccc
Confidence 4799999999999999999999999999 99999999999887776531 12479999999865544 22
Q ss_pred cccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEEEeCchHHHHHHHhchhhhhh
Q 012083 94 RKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKASIYTSAPGILAMIMNIPKFIE 173 (471)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~ 173 (471)
..+...++..+.+.+.+.++++++++. .++|+||+|.++.|+..+|+++|||++.++++++..+..+.+.+....
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~VI~D~~~~wa~~vA~~lgIP~v~f~~~~a~~~~~~~~~~~~~~ 154 (459)
T PLN02448 80 AADFPGFLEAVMTKMEAPFEQLLDRLE-----PPVTAIVADTYLFWAVGVGNRRNIPVASLWTMSATFFSVFYHFDLLPQ 154 (459)
T ss_pred ccCHHHHHHHHHHHhHHHHHHHHHhcC-----CCcEEEEECCccHHHHHHHHHhCCCeEEEEhHHHHHHHHHHHhhhhhh
Confidence 234556666666667778888887642 378999999999999999999999999999999988777776654332
Q ss_pred hCCCCCCcccc-cccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhchhhhhh---
Q 012083 174 AGIISSDGIVI-KNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSANKI--- 249 (471)
Q Consensus 174 ~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~--- 249 (471)
.+..+.. .+. ..+....+|+++.+...+++ .+.... .....+.+.+......+++.+++||+.+||+.....
T Consensus 155 ~~~~~~~-~~~~~~~~~~~iPg~~~l~~~dlp-~~~~~~--~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~ 230 (459)
T PLN02448 155 NGHFPVE-LSESGEERVDYIPGLSSTRLSDLP-PIFHGN--SRRVLKRILEAFSWVPKAQYLLFTSFYELEAQAIDALKS 230 (459)
T ss_pred ccCCCCc-cccccCCccccCCCCCCCChHHCc-hhhcCC--chHHHHHHHHHHhhcccCCEEEEccHHHhhHHHHHHHHh
Confidence 2211100 000 11222357888878888877 433322 112233444445556778899999999999875543
Q ss_pred --CCCcceeccccCCCCC---CCC-CC-cCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHHHHhCCCCEEEEE
Q 012083 250 --LPSIIPVGPLIANGQP---TGN-FW-SEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELAGQPFLCGV 322 (471)
Q Consensus 250 --~~~~~~vGp~~~~~~~---~~~-~~-~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~ 322 (471)
.++++.|||+.+.... ... .. +.+.++.+|++.++++++|||||||+...+.+++.+++.+|+.++++|||++
T Consensus 231 ~~~~~~~~iGP~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvsfGs~~~~~~~~~~~~~~~l~~~~~~~lw~~ 310 (459)
T PLN02448 231 KFPFPVYPIGPSIPYMELKDNSSSSNNEDNEPDYFQWLDSQPEGSVLYVSLGSFLSVSSAQMDEIAAGLRDSGVRFLWVA 310 (459)
T ss_pred hcCCceEEecCcccccccCCCccccccccchhHHHHHHcCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCEEEEE
Confidence 2478899999763211 000 01 1234788999999888999999999988889999999999999999999987
Q ss_pred cCCCCCCCCCCCCchhHHhhCCCcEEEeccchhhhhccCcceeeeeccCcchhhHhhhcCCceeecccccchhhhHHHHH
Q 012083 323 RPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCIC 402 (471)
Q Consensus 323 ~~~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~ 402 (471)
.+. ..++.++.++|+++++|+||.+||+|+++++|||||||||++||+++|||||++|++.||+.||++++
T Consensus 311 ~~~---------~~~~~~~~~~~~~v~~w~pQ~~iL~h~~v~~fvtHgG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~ 381 (459)
T PLN02448 311 RGE---------ASRLKEICGDMGLVVPWCDQLKVLCHSSVGGFWTHCGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIV 381 (459)
T ss_pred cCc---------hhhHhHhccCCEEEeccCCHHHHhccCccceEEecCchhHHHHHHHcCCCEEeccccccchhhHHHHH
Confidence 643 13455556678999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcceeeecCC--CCCCcCHhHHHHHHHHHhCcH-----HHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHhC
Q 012083 403 DDWKIGLWLEPD--DNGIIGRHEIKRKVDELLSND-----VVRKNALKLKELAQKSVTKEGSSSKNLEYFIKQITE 471 (471)
Q Consensus 403 ~~~G~G~~~~~~--~~~~~~~~~l~~~i~~ll~~~-----~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~~ 471 (471)
+.||+|+.+..+ +...+++++|.++++++|.|+ +||+||+++++++++++.+||||++++++||+++++
T Consensus 382 ~~~g~G~~~~~~~~~~~~~~~~~l~~av~~vl~~~~~~~~~~r~~a~~~~~~~~~a~~~gGss~~~l~~~v~~~~~ 457 (459)
T PLN02448 382 EDWKIGWRVKREVGEETLVGREEIAELVKRFMDLESEEGKEMRRRAKELQEICRGAIAKGGSSDTNLDAFIRDISQ 457 (459)
T ss_pred HHhCceEEEecccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhc
Confidence 867999888531 124579999999999999763 799999999999999999999999999999999874
|
|
| >PLN00164 glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-64 Score=496.99 Aligned_cols=436 Identities=23% Similarity=0.382 Sum_probs=337.8
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCC----CeEEEEeCCcchh----hhHHhhhcCCCCccCCCCCCeEEEeCCCC
Q 012083 16 TNVHVLLVSFPAQGHVASLMKLAHRLADCR----IKVTFVTTEFICE----RIKESRQLGSFSEMGDAQQLVRIVPLPDG 87 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rG----h~Vt~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 87 (471)
.|.||+++|++++||++|++.||+.|+.+| +.|||++++.... .+........ ....+++|+.+|++
T Consensus 2 ~~~HVVlvPfpaqGHi~P~l~LAk~La~~g~~~~~~vT~~~t~~~~~~~~~~~~~~~~~~~-----~~~~~i~~~~lp~~ 76 (480)
T PLN00164 2 AAPTVVLLPVWGSGHLMSMLEAGKRLLASSGGGALSLTVLVMPPPTPESASEVAAHVRREA-----ASGLDIRFHHLPAV 76 (480)
T ss_pred CCCEEEEeCCcchhHHHHHHHHHHHHHhCCCCCcEEEEEEEcCCCccchhHHHHHHHhhcc-----cCCCCEEEEECCCC
Confidence 567999999999999999999999999986 7999999876532 2322211000 11126999999976
Q ss_pred CCCCCCcccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEEEeCchHHHHHHHhc
Q 012083 88 LEPEDDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKASIYTSAPGILAMIMN 167 (471)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~ 167 (471)
..+. ...+...++..+...+.+.++++++.+. .++++||+|.++.|+..+|+++|||++.++++++..+..+++
T Consensus 77 ~~p~-~~e~~~~~~~~~~~~~~~~l~~~L~~l~-----~pv~cIV~D~f~~Wa~dVA~elgIP~v~F~t~sA~~~~~~~~ 150 (480)
T PLN00164 77 EPPT-DAAGVEEFISRYIQLHAPHVRAAIAGLS-----CPVAALVVDFFCTPLLDVARELAVPAYVYFTSTAAMLALMLR 150 (480)
T ss_pred CCCC-ccccHHHHHHHHHHhhhHHHHHHHHhcC-----CCceEEEECCcchhHHHHHHHhCCCEEEEECccHHHHHHHhh
Confidence 4332 2224445566566677888888887641 367999999999999999999999999999999999988888
Q ss_pred hhhhhhhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhchhhh
Q 012083 168 IPKFIEAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSAN 247 (471)
Q Consensus 168 ~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~ 247 (471)
.+...... +. .++..... ..+|+++.++..+++ .+..... .. ....+....+...+++.+++||+.+||+...
T Consensus 151 ~~~~~~~~--~~-~~~~~~~~-~~iPGlp~l~~~dlp-~~~~~~~-~~-~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~ 223 (480)
T PLN00164 151 LPALDEEV--AV-EFEEMEGA-VDVPGLPPVPASSLP-APVMDKK-SP-NYAWFVYHGRRFMEAAGIIVNTAAELEPGVL 223 (480)
T ss_pred hhhhcccc--cC-cccccCcc-eecCCCCCCChHHCC-chhcCCC-cH-HHHHHHHHHHhhhhcCEEEEechHHhhHHHH
Confidence 76532110 00 01110111 247999888888888 4433221 11 1223333345567899999999999998655
Q ss_pred hhC-----------CCcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHHHHhCCC
Q 012083 248 KIL-----------PSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELAGQ 316 (471)
Q Consensus 248 ~~~-----------~~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~ 316 (471)
... ++++.|||+...... ....+.+.+|.+||+.+++++||||||||+...+.+++.+++.+|+.+++
T Consensus 224 ~~~~~~~~~~~~~~~~v~~vGPl~~~~~~-~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~q~~ela~gL~~s~~ 302 (480)
T PLN00164 224 AAIADGRCTPGRPAPTVYPIGPVISLAFT-PPAEQPPHECVRWLDAQPPASVVFLCFGSMGFFDAPQVREIAAGLERSGH 302 (480)
T ss_pred HHHHhccccccCCCCceEEeCCCcccccc-CCCccchHHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHHHcCC
Confidence 442 479999999853221 11234567899999999888999999999999999999999999999999
Q ss_pred CEEEEEcCCCCC--------CCCCCCCchhHHhhCCCcEEE-eccchhhhhccCcceeeeeccCcchhhHhhhcCCceee
Q 012083 317 PFLCGVRPGFIN--------GSSTNNPDGLVAKVADFGKMV-KWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLC 387 (471)
Q Consensus 317 ~~i~~~~~~~~~--------~~~~~lp~~~~~~~~~nv~~~-~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~ 387 (471)
+|||+++..... +....+|++|.+++.++..++ +|+||.+||+|+++++|||||||||++||+++|||||+
T Consensus 303 ~flWv~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~PQ~~iL~h~~vg~fvtH~GwnS~~Eai~~GVP~l~ 382 (480)
T PLN00164 303 RFLWVLRGPPAAGSRHPTDADLDELLPEGFLERTKGRGLVWPTWAPQKEILAHAAVGGFVTHCGWNSVLESLWHGVPMAP 382 (480)
T ss_pred CEEEEEcCCcccccccccccchhhhCChHHHHHhcCCCeEEeecCCHHHHhcCcccCeEEeecccchHHHHHHcCCCEEe
Confidence 999999853211 112348899999998888777 99999999999999999999999999999999999999
Q ss_pred cccccchhhhHHHHHhhhcceeeecCCC--CCCcCHhHHHHHHHHHhCcH-----HHHHHHHHHHHHHHHHhhcCCChHH
Q 012083 388 WPWGHDHLYIKSCICDDWKIGLWLEPDD--NGIIGRHEIKRKVDELLSND-----VVRKNALKLKELAQKSVTKEGSSSK 460 (471)
Q Consensus 388 ~P~~~DQ~~na~~v~~~~G~G~~~~~~~--~~~~~~~~l~~~i~~ll~~~-----~~~~~a~~l~~~~~~~~~~gg~~~~ 460 (471)
+|+++||+.||+++++.+|+|+.+..++ .+.+++++|.++|+++|.|+ .+|+||++|++++++++.+||||++
T Consensus 383 ~P~~~DQ~~Na~~~~~~~gvG~~~~~~~~~~~~~~~e~l~~av~~vm~~~~~~~~~~r~~a~~~~~~~~~a~~~gGSS~~ 462 (480)
T PLN00164 383 WPLYAEQHLNAFELVADMGVAVAMKVDRKRDNFVEAAELERAVRSLMGGGEEEGRKAREKAAEMKAACRKAVEEGGSSYA 462 (480)
T ss_pred CCccccchhHHHHHHHHhCeEEEeccccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhcCCCcHHH
Confidence 9999999999998755489999996421 13479999999999999753 5899999999999999999999999
Q ss_pred HHHHHHHHHh
Q 012083 461 NLEYFIKQIT 470 (471)
Q Consensus 461 ~~~~~~~~~~ 470 (471)
++++||++++
T Consensus 463 ~l~~~v~~~~ 472 (480)
T PLN00164 463 ALQRLAREIR 472 (480)
T ss_pred HHHHHHHHHH
Confidence 9999999986
|
|
| >PLN03007 UDP-glucosyltransferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-63 Score=493.10 Aligned_cols=443 Identities=24% Similarity=0.424 Sum_probs=320.1
Q ss_pred cCCCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCC---CCCC
Q 012083 13 LNKTNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLP---DGLE 89 (471)
Q Consensus 13 m~~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~~ 89 (471)
|+.+++||+++|+|++||++|++.||+.|+.|||+|||++++.+...+++.+...... .+...-.+.+.++| ++++
T Consensus 1 ~~~~~~hVvlvp~pa~GHi~P~L~LAk~L~~rG~~VT~vtt~~~~~~i~~~~a~~~~~-~~~~~~~~~~~~~p~~~~glP 79 (482)
T PLN03007 1 MNHEKLHILFFPFMAHGHMIPTLDMAKLFSSRGAKSTILTTPLNAKIFEKPIEAFKNL-NPGLEIDIQIFNFPCVELGLP 79 (482)
T ss_pred CCCCCcEEEEECCCccccHHHHHHHHHHHHhCCCEEEEEECCCchhhhhhhhhhhccc-CCCCcceEEEeeCCCCcCCCC
Confidence 5667789999999999999999999999999999999999999887776554321100 00111145555565 3455
Q ss_pred CCCCc---------ccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEEEeCchHH
Q 012083 90 PEDDR---------KDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKASIYTSAPG 160 (471)
Q Consensus 90 ~~~~~---------~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~ 160 (471)
..... .....++..+.. ..+.+.+.++++... .+||+||+|.++.|+..+|+++|||.+.+++++++
T Consensus 80 ~g~e~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~l~~~l~~---~~~~~IV~D~~~~w~~~vA~~lgIP~v~f~~~~a~ 155 (482)
T PLN03007 80 EGCENVDFITSNNNDDSGDLFLKFLF-STKYFKDQLEKLLET---TRPDCLVADMFFPWATEAAEKFGVPRLVFHGTGYF 155 (482)
T ss_pred CCcccccccccccccchHHHHHHHHH-HHHHHHHHHHHHHhc---CCCCEEEECCcchhHHHHHHHhCCCeEEeecccHH
Confidence 43111 112233333332 222233333332211 68999999999999999999999999999998887
Q ss_pred HHHHHhchhhhhhhCCCCCCcccccccccccCCCCCC---CCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEc
Q 012083 161 ILAMIMNIPKFIEAGIISSDGIVIKNEKIELSPYLPA---ASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCT 237 (471)
Q Consensus 161 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 237 (471)
....++.+....+... .+..... ..+|+++. ++..+++ .. . ....+..++....+...+++.+++|
T Consensus 156 ~~~~~~~~~~~~~~~~-----~~~~~~~-~~~pg~p~~~~~~~~~~~-~~---~-~~~~~~~~~~~~~~~~~~~~~vl~N 224 (482)
T PLN03007 156 SLCASYCIRVHKPQKK-----VASSSEP-FVIPDLPGDIVITEEQIN-DA---D-EESPMGKFMKEVRESEVKSFGVLVN 224 (482)
T ss_pred HHHHHHHHHhcccccc-----cCCCCce-eeCCCCCCccccCHHhcC-CC---C-CchhHHHHHHHHHhhcccCCEEEEE
Confidence 7665543321111000 1111111 12566652 3333333 11 1 1122344444444556788999999
Q ss_pred chhhhchhhhhhC-----CCcceeccccCCCCCC------C-CCCcCcchhcccccCCCCCcEEEEecCccccCCHHHHH
Q 012083 238 WFHELAPSANKIL-----PSIIPVGPLIANGQPT------G-NFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFN 305 (471)
Q Consensus 238 s~~~l~~~~~~~~-----~~~~~vGp~~~~~~~~------~-~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~ 305 (471)
|+.+|+....+.. .++++|||+....... . .....+.+|.+|++.++++++|||||||+...+.+++.
T Consensus 225 t~~~le~~~~~~~~~~~~~~~~~VGPl~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~ 304 (482)
T PLN03007 225 SFYELESAYADFYKSFVAKRAWHIGPLSLYNRGFEEKAERGKKANIDEQECLKWLDSKKPDSVIYLSFGSVASFKNEQLF 304 (482)
T ss_pred CHHHHHHHHHHHHHhccCCCEEEEccccccccccccccccCCccccchhHHHHHHhcCCCCceEEEeecCCcCCCHHHHH
Confidence 9999998766654 3689999986532210 1 11112467899999998889999999999888999999
Q ss_pred HHHHHHHhCCCCEEEEEcCCCCC-CCCCCCCchhHHhh-CCCcEEEeccchhhhhccCcceeeeeccCcchhhHhhhcCC
Q 012083 306 ELALGLELAGQPFLCGVRPGFIN-GSSTNNPDGLVAKV-ADFGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGV 383 (471)
Q Consensus 306 ~~~~al~~~~~~~i~~~~~~~~~-~~~~~lp~~~~~~~-~~nv~~~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~Gv 383 (471)
+++.+|+.++++|||+++..... .....+|++|.+++ +.|+++.+|+||.+||+|+++++|||||||||++||+++||
T Consensus 305 ~~~~~l~~~~~~flw~~~~~~~~~~~~~~lp~~~~~r~~~~g~~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GV 384 (482)
T PLN03007 305 EIAAGLEGSGQNFIWVVRKNENQGEKEEWLPEGFEERTKGKGLIIRGWAPQVLILDHQATGGFVTHCGWNSLLEGVAAGL 384 (482)
T ss_pred HHHHHHHHCCCCEEEEEecCCcccchhhcCCHHHHHHhccCCEEEecCCCHHHHhccCccceeeecCcchHHHHHHHcCC
Confidence 99999999999999999864211 11235899998887 45556679999999999999999999999999999999999
Q ss_pred ceeecccccchhhhHHHHHhhhcceeeecCC-----CCCCcCHhHHHHHHHHHhCcH---HHHHHHHHHHHHHHHHhhcC
Q 012083 384 PFLCWPWGHDHLYIKSCICDDWKIGLWLEPD-----DNGIIGRHEIKRKVDELLSND---VVRKNALKLKELAQKSVTKE 455 (471)
Q Consensus 384 P~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~-----~~~~~~~~~l~~~i~~ll~~~---~~~~~a~~l~~~~~~~~~~g 455 (471)
|||++|++.||+.||+++++.+++|+.+... +...++.++|.++|+++|.|+ +||+||+++++.+++++.+|
T Consensus 385 P~v~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~l~~av~~~m~~~~~~~~r~~a~~~~~~a~~a~~~g 464 (482)
T PLN03007 385 PMVTWPVGAEQFYNEKLVTQVLRTGVSVGAKKLVKVKGDFISREKVEKAVREVIVGEEAEERRLRAKKLAEMAKAAVEEG 464 (482)
T ss_pred CeeeccchhhhhhhHHHHHHhhcceeEeccccccccccCcccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999987545666655311 125689999999999999987 89999999999999999999
Q ss_pred CChHHHHHHHHHHHhC
Q 012083 456 GSSSKNLEYFIKQITE 471 (471)
Q Consensus 456 g~~~~~~~~~~~~~~~ 471 (471)
|||+.++++|++++++
T Consensus 465 GsS~~~l~~~v~~~~~ 480 (482)
T PLN03007 465 GSSFNDLNKFMEELNS 480 (482)
T ss_pred CcHHHHHHHHHHHHHh
Confidence 9999999999999864
|
|
| >PLN03004 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-63 Score=485.66 Aligned_cols=429 Identities=25% Similarity=0.435 Sum_probs=323.9
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCC--CeEEE--EeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCC
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADCR--IKVTF--VTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPED 92 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~rG--h~Vt~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 92 (471)
+.||+++|++++||++|++.||+.|+.+| +.||+ ++++.+........ +. .....++++|+.+|++.+..+
T Consensus 3 ~~Hvvl~P~p~qGHi~P~l~LA~~La~~g~~~~vti~~~~~~~~~~~~~~~~-~~----~~~~~~~i~~~~lp~~~~~~~ 77 (451)
T PLN03004 3 EEAIVLYPAPPIGHLVSMVELGKTILSKNPSLSIHIILVPPPYQPESTATYI-SS----VSSSFPSITFHHLPAVTPYSS 77 (451)
T ss_pred CcEEEEeCCcccchHHHHHHHHHHHHhCCCceEEEEEEecCcchhhhhhhhh-cc----ccCCCCCeEEEEcCCCCCCCC
Confidence 46999999999999999999999999998 55665 44443322222110 00 001223699999997754221
Q ss_pred ---CcccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEEEeCchHHHHHHHhchh
Q 012083 93 ---DRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKASIYTSAPGILAMIMNIP 169 (471)
Q Consensus 93 ---~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p 169 (471)
...+....+......+.+.++++++++.. . .+++|||+|.++.|+..+|+++|||++.+++++++.+..+.+.+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-~--~pv~cII~D~~~~Wa~~vA~~lgIP~v~F~t~sA~~~~~~~~~~ 154 (451)
T PLN03004 78 SSTSRHHHESLLLEILCFSNPSVHRTLFSLSR-N--FNVRAMIIDFFCTAVLDITADFTFPVYFFYTSGAACLAFSFYLP 154 (451)
T ss_pred ccccccCHHHHHHHHHHhhhHHHHHHHHhcCC-C--CCceEEEECCcchhHHHHHHHhCCCEEEEeCHhHHHHHHHHHHH
Confidence 11233334444555777888888887632 1 34699999999999999999999999999999999998888765
Q ss_pred hhhhhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhchhhhhh
Q 012083 170 KFIEAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSANKI 249 (471)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~ 249 (471)
...... +.... .......+|+++.++..+++ .+..... .....++.+......+++.+++||+.+||......
T Consensus 155 ~~~~~~--~~~~~--~~~~~v~iPg~p~l~~~dlp-~~~~~~~--~~~~~~~~~~~~~~~~~~~vl~NTf~eLE~~~l~~ 227 (451)
T PLN03004 155 TIDETT--PGKNL--KDIPTVHIPGVPPMKGSDMP-KAVLERD--DEVYDVFIMFGKQLSKSSGIIINTFDALENRAIKA 227 (451)
T ss_pred hccccc--ccccc--ccCCeecCCCCCCCChHHCc-hhhcCCc--hHHHHHHHHHHHhhcccCeeeeeeHHHhHHHHHHH
Confidence 422110 00000 11122357899888888888 4433221 12334444555566789999999999999976654
Q ss_pred C------CCcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHHHHhCCCCEEEEEc
Q 012083 250 L------PSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELAGQPFLCGVR 323 (471)
Q Consensus 250 ~------~~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~ 323 (471)
. ++++.|||+.............+.+|.+||+.+++++||||||||+...+.+++.+++.+|+.++++|||+++
T Consensus 228 l~~~~~~~~v~~vGPl~~~~~~~~~~~~~~~~c~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~~FlW~~r 307 (451)
T PLN03004 228 ITEELCFRNIYPIGPLIVNGRIEDRNDNKAVSCLNWLDSQPEKSVVFLCFGSLGLFSKEQVIEIAVGLEKSGQRFLWVVR 307 (451)
T ss_pred HHhcCCCCCEEEEeeeccCccccccccchhhHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHHHCCCCEEEEEc
Confidence 3 4799999997532211011122456999999998889999999999999999999999999999999999998
Q ss_pred CCCCCC----CCC-CCCchhHHhhCCCc-EEEeccchhhhhccCcceeeeeccCcchhhHhhhcCCceeecccccchhhh
Q 012083 324 PGFING----SST-NNPDGLVAKVADFG-KMVKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYI 397 (471)
Q Consensus 324 ~~~~~~----~~~-~lp~~~~~~~~~nv-~~~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~n 397 (471)
...... ... .+|++|.+++.++. .+.+|+||.+||+|+++++|||||||||++||+++|||||++|++.||+.|
T Consensus 308 ~~~~~~~~~~~~~~~lp~gf~er~~~~g~~v~~W~PQ~~iL~H~~v~~FvTH~G~nS~lEal~~GVP~v~~P~~~DQ~~n 387 (451)
T PLN03004 308 NPPELEKTELDLKSLLPEGFLSRTEDKGMVVKSWAPQVPVLNHKAVGGFVTHCGWNSILEAVCAGVPMVAWPLYAEQRFN 387 (451)
T ss_pred CCccccccccchhhhCChHHHHhccCCcEEEEeeCCHHHHhCCCccceEeccCcchHHHHHHHcCCCEEeccccccchhh
Confidence 531100 112 38999999987655 556999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHhhcCCChHH
Q 012083 398 KSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKELAQKSVTKEGSSSK 460 (471)
Q Consensus 398 a~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~~~~~gg~~~~ 460 (471)
|+++++.+|+|+.++.++.+.+++++|.++|+++|.|++||+|++++++..++++++||||++
T Consensus 388 a~~~~~~~g~g~~l~~~~~~~~~~e~l~~av~~vm~~~~~r~~a~~~~~~a~~Av~~GGSS~~ 450 (451)
T PLN03004 388 RVMIVDEIKIAISMNESETGFVSSTEVEKRVQEIIGECPVRERTMAMKNAAELALTETGSSHT 450 (451)
T ss_pred HHHHHHHhCceEEecCCcCCccCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 999985479999997522236799999999999999999999999999999999999999975
|
|
| >PLN02764 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-62 Score=480.16 Aligned_cols=419 Identities=22% Similarity=0.384 Sum_probs=320.8
Q ss_pred cCCCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCC--CCCCC
Q 012083 13 LNKTNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLP--DGLEP 90 (471)
Q Consensus 13 m~~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~ 90 (471)
|+..++||+++|++++||++|++.||+.|+.+|+.|||++++.+...+.+. .. .+..-.+++.++| +++++
T Consensus 1 ~~~~~~Hvvl~P~paqGHi~P~l~LAk~La~~g~~vT~~tt~~~~~~~~~~--~~-----~~~~~~v~~~~~p~~~glp~ 73 (453)
T PLN02764 1 MGGLKFHVLMYPWFATGHMTPFLFLANKLAEKGHTVTFLLPKKALKQLEHL--NL-----FPHNIVFRSVTVPHVDGLPV 73 (453)
T ss_pred CCCCCcEEEEECCcccccHHHHHHHHHHHHhCCCEEEEEeCcchhhhhccc--cc-----CCCCceEEEEECCCcCCCCC
Confidence 455678999999999999999999999999999999999999876554431 00 0001137788887 66655
Q ss_pred C-CCcc----cHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEEEeCchHHHHHHH
Q 012083 91 E-DDRK----DEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKASIYTSAPGILAMI 165 (471)
Q Consensus 91 ~-~~~~----~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~ 165 (471)
+ +... .....+......+.+.++++++. .+||+||+|. ..|+..+|+++|||++.++++++..+..+
T Consensus 74 g~e~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~-------~~~~~iV~D~-~~w~~~vA~~~gIP~~~f~~~~a~~~~~~ 145 (453)
T PLN02764 74 GTETVSEIPVTSADLLMSAMDLTRDQVEVVVRA-------VEPDLIFFDF-AHWIPEVARDFGLKTVKYVVVSASTIASM 145 (453)
T ss_pred cccccccCChhHHHHHHHHHHHhHHHHHHHHHh-------CCCCEEEECC-chhHHHHHHHhCCCEEEEEcHHHHHHHHH
Confidence 4 2111 11122333334556778888776 6789999995 77999999999999999999999887776
Q ss_pred hchhhhhhhCCCCCCcccccccccccCCCCCC----CCccccCCCCCC--CCCchhHHHHHHHHHHhhhccCcEEEEcch
Q 012083 166 MNIPKFIEAGIISSDGIVIKNEKIELSPYLPA----ASPAEFLWNCPG--NPSLQTLMFQYINVIRQNIEASDRILCTWF 239 (471)
Q Consensus 166 ~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~----~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~ 239 (471)
.+ + .+..+ ..+|++|. ++..+++. +.. ..........++.+.......++.+++||+
T Consensus 146 ~~-~----~~~~~-----------~~~pglp~~~v~l~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~s~~vlvNTf 208 (453)
T PLN02764 146 LV-P----GGELG-----------VPPPGYPSSKVLLRKQDAYT-MKNLEPTNTIDVGPNLLERVTTSLMNSDVIAIRTA 208 (453)
T ss_pred hc-c----cccCC-----------CCCCCCCCCcccCcHhhCcc-hhhcCCCccchhHHHHHHHHHHhhccCCEEEEecc
Confidence 53 1 11110 12356652 45555552 211 111112233444444455678999999999
Q ss_pred hhhchhhhhhC-----CCcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHHHHhC
Q 012083 240 HELAPSANKIL-----PSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELA 314 (471)
Q Consensus 240 ~~l~~~~~~~~-----~~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~ 314 (471)
.+||....... ++++.|||+.+... .....+.+|.+|||.+++++||||||||+...+.+++.+++.+|+..
T Consensus 209 ~eLE~~~~~~~~~~~~~~v~~VGPL~~~~~---~~~~~~~~cl~WLD~q~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s 285 (453)
T PLN02764 209 REIEGNFCDYIEKHCRKKVLLTGPVFPEPD---KTRELEERWVKWLSGYEPDSVVFCALGSQVILEKDQFQELCLGMELT 285 (453)
T ss_pred HHhhHHHHHHHHhhcCCcEEEeccCccCcc---ccccchhHHHHHHhCCCCCceEEEeecccccCCHHHHHHHHHHHHhC
Confidence 99998766654 46999999976432 11123568999999999999999999999999999999999999999
Q ss_pred CCCEEEEEcCCCCC-CCCCCCCchhHHhhCCCcEEE-eccchhhhhccCcceeeeeccCcchhhHhhhcCCceeeccccc
Q 012083 315 GQPFLCGVRPGFIN-GSSTNNPDGLVAKVADFGKMV-KWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGH 392 (471)
Q Consensus 315 ~~~~i~~~~~~~~~-~~~~~lp~~~~~~~~~nv~~~-~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~ 392 (471)
+.+|+|+++..... .....+|++|.+++.+++.++ +|+||.+||+|++|++|||||||||++||+++|||||++|++.
T Consensus 286 ~~pflwv~r~~~~~~~~~~~lp~~f~~r~~grG~v~~~W~PQ~~vL~h~~v~~FvtH~G~nS~~Eal~~GVP~l~~P~~~ 365 (453)
T PLN02764 286 GSPFLVAVKPPRGSSTIQEALPEGFEERVKGRGVVWGGWVQQPLILSHPSVGCFVSHCGFGSMWESLLSDCQIVLVPQLG 365 (453)
T ss_pred CCCeEEEEeCCCCCcchhhhCCcchHhhhccCCcEEeCCCCHHHHhcCcccCeEEecCCchHHHHHHHcCCCEEeCCccc
Confidence 99999999853211 123469999999998888776 9999999999999999999999999999999999999999999
Q ss_pred chhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcH-----HHHHHHHHHHHHHHHHhhcCCChHHHHHHHHH
Q 012083 393 DHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSND-----VVRKNALKLKELAQKSVTKEGSSSKNLEYFIK 467 (471)
Q Consensus 393 DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~-----~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~ 467 (471)
||+.||+++++.+|+|+.+..++.+.++.++|.++|+++|+++ ++|+|++++++.+++ ||||++++++||+
T Consensus 366 DQ~~na~~l~~~~g~gv~~~~~~~~~~~~e~i~~av~~vm~~~~~~g~~~r~~a~~~~~~~~~----~GSS~~~l~~lv~ 441 (453)
T PLN02764 366 DQVLNTRLLSDELKVSVEVAREETGWFSKESLRDAINSVMKRDSEIGNLVKKNHTKWRETLAS----PGLLTGYVDNFIE 441 (453)
T ss_pred chHHHHHHHHHHhceEEEeccccCCccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHh----cCCHHHHHHHHHH
Confidence 9999999997548999998542113589999999999999874 489999999998865 8999999999999
Q ss_pred HHh
Q 012083 468 QIT 470 (471)
Q Consensus 468 ~~~ 470 (471)
+++
T Consensus 442 ~~~ 444 (453)
T PLN02764 442 SLQ 444 (453)
T ss_pred HHH
Confidence 886
|
|
| >PLN02167 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-63 Score=491.04 Aligned_cols=441 Identities=24% Similarity=0.402 Sum_probs=328.1
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCC---CeEEEEeCCcchh-hhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCC
Q 012083 16 TNVHVLLVSFPAQGHVASLMKLAHRLADCR---IKVTFVTTEFICE-RIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPE 91 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rG---h~Vt~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 91 (471)
++.||+++|++++||++|++.||+.|+.+| +.||++++..... ......... ....++++|+.+|+...+.
T Consensus 2 ~~~hVv~~PfpaqGHi~P~l~LAk~La~~G~~~t~vt~~~t~~~~~~~~~~~~~~~-----~~~~~~i~~~~lp~~~~p~ 76 (475)
T PLN02167 2 KEAELIFVPFPSTGHILVTIEFAKRLINLDRRIHTITILYWSLPFAPQADAFLKSL-----IASEPRIRLVTLPEVQDPP 76 (475)
T ss_pred CccEEEEeCChhhhhHHHHHHHHHHHHhCCCCeEEEEEEECCCCcchhhhHHHhhc-----ccCCCCeEEEECCCCCCCc
Confidence 567999999999999999999999999998 3567777543321 111110000 0122369999999754221
Q ss_pred C-C--cccHHHHHHHHHhhccHHHHHHHHHHhccc---CCCCeeEEEECCCcchHHHHHHHcCCceEEEeCchHHHHHHH
Q 012083 92 D-D--RKDEAKMTRSISKVMPGYLEELIQKINQQE---EDEKITCVIADVTFGWALQVAAKLELKKASIYTSAPGILAMI 165 (471)
Q Consensus 92 ~-~--~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~---~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~ 165 (471)
+ . .......+..+...+.+.+++.++++.... ...+++|||+|.++.|+..+|+++|||++.++++++..+..+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~pv~cvV~D~f~~Wa~dVA~elgIP~v~F~t~~A~~~~~~ 156 (475)
T PLN02167 77 PMELFVKASEAYILEFVKKMVPLVRDALSTLVSSRDESDSVRVAGLVLDFFCVPLIDVGNEFNLPSYIFLTCNAGFLGMM 156 (475)
T ss_pred cccccccchHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCeEEEEECCccHHHHHHHHHhCCCEEEEECccHHHHHHH
Confidence 1 1 112222333344566667777777653210 001459999999999999999999999999999999988888
Q ss_pred hchhhhhhhCCCCCCcccc-cccccccCCCC-CCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhc
Q 012083 166 MNIPKFIEAGIISSDGIVI-KNEKIELSPYL-PAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELA 243 (471)
Q Consensus 166 ~~~p~~~~~~~~~~~~~~~-~~~~~~~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~ 243 (471)
++++..... ... ..+. ..+....+|++ +.++..+++ .+..... ..+.+.+..+...+++.+++||+.+||
T Consensus 157 ~~~~~~~~~--~~~-~~~~~~~~~~~~iPgl~~~l~~~dlp-~~~~~~~----~~~~~~~~~~~~~~a~~vlvNTf~eLE 228 (475)
T PLN02167 157 KYLPERHRK--TAS-EFDLSSGEEELPIPGFVNSVPTKVLP-PGLFMKE----SYEAWVEIAERFPEAKGILVNSFTELE 228 (475)
T ss_pred HHHHHhccc--ccc-ccccCCCCCeeECCCCCCCCChhhCc-hhhhCcc----hHHHHHHHHHhhcccCEeeeccHHHHH
Confidence 776643211 100 0110 00111247888 457777776 3222111 122334445556889999999999999
Q ss_pred hhhhhhC-------CCcceeccccCCCCCCCCC--CcCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHHHHhC
Q 012083 244 PSANKIL-------PSIIPVGPLIANGQPTGNF--WSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELA 314 (471)
Q Consensus 244 ~~~~~~~-------~~~~~vGp~~~~~~~~~~~--~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~ 314 (471)
+...... |++++|||++......... ...+.+|.+||+.+++++||||||||+...+.+++.+++.+|+.+
T Consensus 229 ~~~~~~l~~~~~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~ela~~l~~~ 308 (475)
T PLN02167 229 PNAFDYFSRLPENYPPVYPVGPILSLKDRTSPNLDSSDRDRIMRWLDDQPESSVVFLCFGSLGSLPAPQIKEIAQALELV 308 (475)
T ss_pred HHHHHHHHhhcccCCeeEEeccccccccccCCCCCcchhHHHHHHHhcCCCCceEEEeecccccCCHHHHHHHHHHHHhC
Confidence 9766542 6899999998643210011 122367999999998889999999999889999999999999999
Q ss_pred CCCEEEEEcCCCCC--CCCCCCCchhHHhhCCCcEEEeccchhhhhccCcceeeeeccCcchhhHhhhcCCceeeccccc
Q 012083 315 GQPFLCGVRPGFIN--GSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGH 392 (471)
Q Consensus 315 ~~~~i~~~~~~~~~--~~~~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~ 392 (471)
+++|||+++..... .....+|++|.+++.+++++++|+||.+||+|++|++|||||||||++||+++|||||++|+++
T Consensus 309 ~~~flw~~~~~~~~~~~~~~~lp~~~~er~~~rg~v~~w~PQ~~iL~h~~vg~fvtH~G~nS~~Eal~~GvP~l~~P~~~ 388 (475)
T PLN02167 309 GCRFLWSIRTNPAEYASPYEPLPEGFMDRVMGRGLVCGWAPQVEILAHKAIGGFVSHCGWNSVLESLWFGVPIATWPMYA 388 (475)
T ss_pred CCcEEEEEecCcccccchhhhCChHHHHHhccCeeeeccCCHHHHhcCcccCeEEeeCCcccHHHHHHcCCCEEeccccc
Confidence 99999999753111 1123589999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhHHH-HHhhhcceeeecCC---C-CCCcCHhHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHhhcCCChHHHHHHHH
Q 012083 393 DHLYIKSC-ICDDWKIGLWLEPD---D-NGIIGRHEIKRKVDELLSND-VVRKNALKLKELAQKSVTKEGSSSKNLEYFI 466 (471)
Q Consensus 393 DQ~~na~~-v~~~~G~G~~~~~~---~-~~~~~~~~l~~~i~~ll~~~-~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~ 466 (471)
||+.||++ +++ +|+|+.+..+ + ...+++++|.++|+++|.++ +||+||+++++++++++.+||||+.++++||
T Consensus 389 DQ~~na~~~~~~-~g~g~~~~~~~~~~~~~~~~~~~l~~av~~~m~~~~~~r~~a~~~~~~~~~av~~gGsS~~~l~~~v 467 (475)
T PLN02167 389 EQQLNAFTMVKE-LGLAVELRLDYVSAYGEIVKADEIAGAVRSLMDGEDVPRKKVKEIAEAARKAVMDGGSSFVAVKRFI 467 (475)
T ss_pred cchhhHHHHHHH-hCeeEEeecccccccCCcccHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 99999987 556 8999998641 0 13579999999999999765 8999999999999999999999999999999
Q ss_pred HHHh
Q 012083 467 KQIT 470 (471)
Q Consensus 467 ~~~~ 470 (471)
++++
T Consensus 468 ~~i~ 471 (475)
T PLN02167 468 DDLL 471 (475)
T ss_pred HHHH
Confidence 9986
|
|
| >PLN03015 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-62 Score=479.04 Aligned_cols=434 Identities=23% Similarity=0.372 Sum_probs=331.9
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhC-CCeEEEEeCCcchhhhH-HhhhcCCCCccCCCCCCeEEEeCCCCCCCC-C
Q 012083 16 TNVHVLLVSFPAQGHVASLMKLAHRLADC-RIKVTFVTTEFICERIK-ESRQLGSFSEMGDAQQLVRIVPLPDGLEPE-D 92 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~~~La~~L~~r-Gh~Vt~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~ 92 (471)
.+.||+++|++++||++|++.||+.|+.+ |..|||++++....... +..... . ....+++++.+|...... .
T Consensus 2 ~~pHvvl~P~p~qGHi~P~l~LAk~La~~~g~~vT~v~t~~~~~~~~~~~~~~~----~-~~~~~i~~~~lp~~~~~~l~ 76 (470)
T PLN03015 2 DQPHALLVASPGLGHLIPILELGNRLSSVLNIHVTILAVTSGSSSPTETEAIHA----A-AARTTCQITEIPSVDVDNLV 76 (470)
T ss_pred CCcEEEEECCcccccHHHHHHHHHHHHhCCCCeEEEEECCCchhhhcccccccc----c-cCCCceEEEECCCCccccCC
Confidence 34699999999999999999999999987 99999998887554331 110000 0 011259999998543211 0
Q ss_pred C-cccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCc-eEEEeCchHHHHHHHhchhh
Q 012083 93 D-RKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELK-KASIYTSAPGILAMIMNIPK 170 (471)
Q Consensus 93 ~-~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP-~v~~~~~~~~~~~~~~~~p~ 170 (471)
. ..+....+......+.+.++++++++. .+|+|||+|.++.|+..+|+++||| .+.+++++++....++++|.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~-----~~~~ciV~D~f~~w~~~vA~~lgIP~~~~f~~~~a~~~~~~~~l~~ 151 (470)
T PLN03015 77 EPDATIFTKMVVKMRAMKPAVRDAVKSMK-----RKPTVMIVDFFGTALMSIADDVGVTAKYVYIPSHAWFLAVMVYLPV 151 (470)
T ss_pred CCCccHHHHHHHHHHhchHHHHHHHHhcC-----CCCeEEEEcCCcHHHHHHHHHcCCCEEEEEcCHHHHHHHHHHhhhh
Confidence 1 113333344445578888999988753 3689999999999999999999999 58888888877777777665
Q ss_pred hhhhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhchhhhhhC
Q 012083 171 FIEAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSANKIL 250 (471)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~ 250 (471)
... .... ......+. ..+|+++.++..+++ ..+.... ...+. .+.+..+...+++.+++||+.+||+......
T Consensus 152 ~~~--~~~~-~~~~~~~~-~~vPg~p~l~~~dlp-~~~~~~~-~~~~~-~~~~~~~~~~~a~gvlvNTf~eLE~~~~~~l 224 (470)
T PLN03015 152 LDT--VVEG-EYVDIKEP-LKIPGCKPVGPKELM-ETMLDRS-DQQYK-ECVRSGLEVPMSDGVLVNTWEELQGNTLAAL 224 (470)
T ss_pred hhc--cccc-ccCCCCCe-eeCCCCCCCChHHCC-HhhcCCC-cHHHH-HHHHHHHhcccCCEEEEechHHHhHHHHHHH
Confidence 321 1111 00010122 258999989999988 3332221 11222 2334445578899999999999998666443
Q ss_pred -----------CCcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHHHHhCCCCEE
Q 012083 251 -----------PSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELAGQPFL 319 (471)
Q Consensus 251 -----------~~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i 319 (471)
++++.|||+..... ....+.+|.+||+.+++++||||||||+..++.+++.+++.+|+.++++||
T Consensus 225 ~~~~~~~~~~~~~v~~VGPl~~~~~----~~~~~~~~~~WLd~~~~~sVvyvsFGS~~~~~~~q~~ela~gl~~s~~~Fl 300 (470)
T PLN03015 225 REDMELNRVMKVPVYPIGPIVRTNV----HVEKRNSIFEWLDKQGERSVVYVCLGSGGTLTFEQTVELAWGLELSGQRFV 300 (470)
T ss_pred HhhcccccccCCceEEecCCCCCcc----cccchHHHHHHHHhCCCCCEEEEECCcCCcCCHHHHHHHHHHHHhCCCcEE
Confidence 46999999985321 112345799999999888999999999999999999999999999999999
Q ss_pred EEEcCCCC--------CC-CCCCCCchhHHhhCCCcEEE-eccchhhhhccCcceeeeeccCcchhhHhhhcCCceeecc
Q 012083 320 CGVRPGFI--------NG-SSTNNPDGLVAKVADFGKMV-KWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWP 389 (471)
Q Consensus 320 ~~~~~~~~--------~~-~~~~lp~~~~~~~~~nv~~~-~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P 389 (471)
|+++.... .+ ....+|++|.+++.+++.++ +|+||.+||+|+++++|||||||||++||+++|||||++|
T Consensus 301 Wv~r~~~~~~~~~~~~~~~~~~~lp~~f~er~~~rGl~v~~W~PQ~~vL~h~~vg~fvtH~GwnS~~Eai~~GvP~v~~P 380 (470)
T PLN03015 301 WVLRRPASYLGASSSDDDQVSASLPEGFLDRTRGVGLVVTQWAPQVEILSHRSIGGFLSHCGWSSVLESLTKGVPIVAWP 380 (470)
T ss_pred EEEecCccccccccccccchhhcCChHHHHhhccCceEEEecCCHHHHhccCccCeEEecCCchhHHHHHHcCCCEEecc
Confidence 99974211 01 12358999999999888765 9999999999999999999999999999999999999999
Q ss_pred cccchhhhHHHHHhhhcceeeecC-CCCCCcCHhHHHHHHHHHhC-----cHHHHHHHHHHHHHHHHHhhcCCChHHHHH
Q 012083 390 WGHDHLYIKSCICDDWKIGLWLEP-DDNGIIGRHEIKRKVDELLS-----NDVVRKNALKLKELAQKSVTKEGSSSKNLE 463 (471)
Q Consensus 390 ~~~DQ~~na~~v~~~~G~G~~~~~-~~~~~~~~~~l~~~i~~ll~-----~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~ 463 (471)
++.||+.||+++++.+|+|+.+.. +..+.+++++|.++|+++|. ..++|+||++++++.++++.+||||++++.
T Consensus 381 ~~~DQ~~na~~~~~~~gvg~~~~~~~~~~~v~~e~i~~~v~~lm~~~~eeg~~~R~ra~~lk~~a~~Av~eGGSS~~nl~ 460 (470)
T PLN03015 381 LYAEQWMNATLLTEEIGVAVRTSELPSEKVIGREEVASLVRKIVAEEDEEGQKIRAKAEEVRVSSERAWSHGGSSYNSLF 460 (470)
T ss_pred cccchHHHHHHHHHHhCeeEEecccccCCccCHHHHHHHHHHHHccCcccHHHHHHHHHHHHHHHHHHhcCCCcHHHHHH
Confidence 999999999999655999999952 11246899999999999994 248999999999999999999999999999
Q ss_pred HHHHHHh
Q 012083 464 YFIKQIT 470 (471)
Q Consensus 464 ~~~~~~~ 470 (471)
+|++++.
T Consensus 461 ~~~~~~~ 467 (470)
T PLN03015 461 EWAKRCY 467 (470)
T ss_pred HHHHhcc
Confidence 9998763
|
|
| >PLN02208 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-62 Score=482.27 Aligned_cols=411 Identities=21% Similarity=0.391 Sum_probs=310.3
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeC--C--CCCCCCC
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPL--P--DGLEPED 92 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~--~~~~~~~ 92 (471)
+.||+++|++++||++|++.||+.|+.+||+|||++++.+...+.+.+ ....++++..+ + ++++...
T Consensus 4 ~~hvv~~P~paqGHi~P~l~LAk~La~~G~~VT~vtt~~~~~~i~~~~---------a~~~~i~~~~l~~p~~dgLp~g~ 74 (442)
T PLN02208 4 KFHAFMFPWFAFGHMIPFLHLANKLAEKGHRVTFLLPKKAQKQLEHHN---------LFPDSIVFHPLTIPPVNGLPAGA 74 (442)
T ss_pred CCEEEEecCccccHHHHHHHHHHHHHhCCCEEEEEeccchhhhhhccc---------CCCCceEEEEeCCCCccCCCCCc
Confidence 589999999999999999999999999999999999998877665432 11224566554 3 4555442
Q ss_pred C-cccHH----HHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEEEeCchHHHHHHHhc
Q 012083 93 D-RKDEA----KMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKASIYTSAPGILAMIMN 167 (471)
Q Consensus 93 ~-~~~~~----~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~ 167 (471)
. ..++. .++......+.+.++++++. .++|+||+| ++.|+..+|+++|||++.++++++.... +.+
T Consensus 75 ~~~~~l~~~l~~~~~~~~~~~~~~l~~~L~~-------~~~~cVV~D-~~~wa~~vA~e~giP~~~f~~~~a~~~~-~~~ 145 (442)
T PLN02208 75 ETTSDIPISMDNLLSEALDLTRDQVEAAVRA-------LRPDLIFFD-FAQWIPEMAKEHMIKSVSYIIVSATTIA-HTH 145 (442)
T ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHHHhh-------CCCeEEEEC-CcHhHHHHHHHhCCCEEEEEhhhHHHHH-HHc
Confidence 1 22222 22222233445556666654 688999999 5779999999999999999999888654 444
Q ss_pred hhhhhhhCCCCCCcccccccccccCCCCCC----CCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhc
Q 012083 168 IPKFIEAGIISSDGIVIKNEKIELSPYLPA----ASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELA 243 (471)
Q Consensus 168 ~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~ 243 (471)
++. +... ..+|++|. ++..+++ .+ . .....+.....+..+...+++.+++||+.+||
T Consensus 146 ~~~----~~~~-----------~~~pglp~~~~~~~~~~~~-~~-~--~~~~~~~~~~~~~~~~~~~~~~vl~Ntf~eLE 206 (442)
T PLN02208 146 VPG----GKLG-----------VPPPGYPSSKVLFRENDAH-AL-A--TLSIFYKRLYHQITTGLKSCDVIALRTCKEIE 206 (442)
T ss_pred cCc----cccC-----------CCCCCCCCcccccCHHHcC-cc-c--ccchHHHHHHHHHHhhhccCCEEEEECHHHHH
Confidence 331 1000 02356653 3455555 22 1 11122222222333456789999999999999
Q ss_pred hhhhhh-----CCCcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHHHHhCCCCE
Q 012083 244 PSANKI-----LPSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELAGQPF 318 (471)
Q Consensus 244 ~~~~~~-----~~~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~ 318 (471)
+..... .+++++|||+..... ...+.+.+|.+||+.+++++||||||||+..++.+++.+++.+++..+.++
T Consensus 207 ~~~~~~~~~~~~~~v~~vGpl~~~~~---~~~~~~~~~~~wLd~~~~~sVvyvSfGS~~~l~~~q~~e~~~~l~~s~~pf 283 (442)
T PLN02208 207 GKFCDYISRQYHKKVLLTGPMFPEPD---TSKPLEEQWSHFLSGFPPKSVVFCSLGSQIILEKDQFQELCLGMELTGLPF 283 (442)
T ss_pred HHHHHHHHhhcCCCEEEEeecccCcC---CCCCCHHHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHHHhCCCcE
Confidence 876654 368999999986542 112346789999999988899999999999999999999999998899999
Q ss_pred EEEEcCCCCC-CCCCCCCchhHHhhCCCcEEE-eccchhhhhccCcceeeeeccCcchhhHhhhcCCceeecccccchhh
Q 012083 319 LCGVRPGFIN-GSSTNNPDGLVAKVADFGKMV-KWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLY 396 (471)
Q Consensus 319 i~~~~~~~~~-~~~~~lp~~~~~~~~~nv~~~-~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~ 396 (471)
+|+++..... .....+|++|.+++.++..++ +|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.
T Consensus 284 ~wv~r~~~~~~~~~~~lp~~f~~r~~~~g~~v~~W~PQ~~iL~H~~v~~FvtHcG~nS~~Eai~~GVP~l~~P~~~DQ~~ 363 (442)
T PLN02208 284 LIAVKPPRGSSTVQEGLPEGFEERVKGRGVVWGGWVQQPLILDHPSIGCFVNHCGPGTIWESLVSDCQMVLIPFLSDQVL 363 (442)
T ss_pred EEEEeCCCcccchhhhCCHHHHHHHhcCCcEeeccCCHHHHhcCCccCeEEccCCchHHHHHHHcCCCEEecCcchhhHH
Confidence 9999743111 122468999999986655554 99999999999999999999999999999999999999999999999
Q ss_pred hHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcH-----HHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHhC
Q 012083 397 IKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSND-----VVRKNALKLKELAQKSVTKEGSSSKNLEYFIKQITE 471 (471)
Q Consensus 397 na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~-----~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~~ 471 (471)
||+++++.+|+|+.++.++.+.+++++|.++|+++|+++ ++|+|++++++.+.+ +|||+.++.+||+++++
T Consensus 364 na~~~~~~~g~gv~~~~~~~~~~~~~~l~~ai~~~m~~~~e~g~~~r~~~~~~~~~~~~----~gsS~~~l~~~v~~l~~ 439 (442)
T PLN02208 364 FTRLMTEEFEVSVEVSREKTGWFSKESLSNAIKSVMDKDSDLGKLVRSNHTKLKEILVS----PGLLTGYVDKFVEELQE 439 (442)
T ss_pred HHHHHHHHhceeEEeccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHhc----CCcHHHHHHHHHHHHHH
Confidence 999877658999999752213489999999999999764 499999999999743 78999999999999864
|
|
| >PLN02670 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-62 Score=481.63 Aligned_cols=429 Identities=24% Similarity=0.365 Sum_probs=325.3
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCC----CCCCCCC
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLP----DGLEPED 92 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~----~~~~~~~ 92 (471)
+.||+++|++++||++|++.||+.|+.||+.|||++++.+...+.+... ...++++++.+| ++++++.
T Consensus 6 ~~HVvl~P~paqGHi~P~l~LAk~La~~G~~vT~v~t~~n~~~~~~~~~--------~~~~~i~~~~lp~p~~dglp~~~ 77 (472)
T PLN02670 6 VLHVAMFPWLAMGHLIPFLRLSKLLAQKGHKISFISTPRNLHRLPKIPS--------QLSSSITLVSFPLPSVPGLPSSA 77 (472)
T ss_pred CcEEEEeCChhhhHHHHHHHHHHHHHhCCCEEEEEeCCchHHhhhhccc--------cCCCCeeEEECCCCccCCCCCCc
Confidence 5799999999999999999999999999999999999987765543210 112369999988 5666542
Q ss_pred C-cccH----HHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEEEeCchHHHHHHHhc
Q 012083 93 D-RKDE----AKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKASIYTSAPGILAMIMN 167 (471)
Q Consensus 93 ~-~~~~----~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~ 167 (471)
. ..+. ..++....+.+.+.+++++++ .+++|||+|.+..|+..+|+++|||++.++++++..+..+.+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-------~~~~cvI~D~f~~wa~~vA~~~gIP~~~f~~~~a~~~~~~~~ 150 (472)
T PLN02670 78 ESSTDVPYTKQQLLKKAFDLLEPPLTTFLET-------SKPDWIIYDYASHWLPSIAAELGISKAFFSLFTAATLSFIGP 150 (472)
T ss_pred ccccccchhhHHHHHHHHHHhHHHHHHHHHh-------CCCcEEEECCcchhHHHHHHHcCCCEEEEehhhHHHHHHHhh
Confidence 1 2222 234445555677777888766 678999999999999999999999999999999988877664
Q ss_pred hhhhhhhCCCCCCcccccccccccCCCC----C--CCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhh
Q 012083 168 IPKFIEAGIISSDGIVIKNEKIELSPYL----P--AASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHE 241 (471)
Q Consensus 168 ~p~~~~~~~~~~~~~~~~~~~~~~~p~~----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~ 241 (471)
.+.....+..+. ..+....+|++ + .++..+++ .+.............+.+......+++.+++||+.+
T Consensus 151 ~~~~~~~~~~~~-----~~~~~~~~p~~~P~~~~~~~~~~dlp-~~~~~~~~~~~~~~~~~~~~~~~~~~~gvlvNTf~e 224 (472)
T PLN02670 151 PSSLMEGGDLRS-----TAEDFTVVPPWVPFESNIVFRYHEVT-KYVEKTEEDETGPSDSVRFGFAIGGSDVVIIRSSPE 224 (472)
T ss_pred hHhhhhcccCCC-----ccccccCCCCcCCCCccccccHHHhh-HHHhccCccchHHHHHHHHHhhcccCCEEEEeCHHH
Confidence 433222222111 11111113332 1 23445666 333211111111222334444567899999999999
Q ss_pred hchhhhhhC-----CCcceeccccCCCCCCCC-C-C--cCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHHHH
Q 012083 242 LAPSANKIL-----PSIIPVGPLIANGQPTGN-F-W--SEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLE 312 (471)
Q Consensus 242 l~~~~~~~~-----~~~~~vGp~~~~~~~~~~-~-~--~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~ 312 (471)
||....... ++++.|||+.+....... . . +.+.+|.+||+.+++++||||||||+...+.+++.+++.+|+
T Consensus 225 LE~~~l~~l~~~~~~~v~~VGPl~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gl~ 304 (472)
T PLN02670 225 FEPEWFDLLSDLYRKPIIPIGFLPPVIEDDEEDDTIDVKGWVRIKEWLDKQRVNSVVYVALGTEASLRREEVTELALGLE 304 (472)
T ss_pred HhHHHHHHHHHhhCCCeEEEecCCccccccccccccccchhHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHH
Confidence 999777653 579999999753110001 0 0 123679999999988899999999999999999999999999
Q ss_pred hCCCCEEEEEcCCCCC--CCCCCCCchhHHhhCCCcEEE-eccchhhhhccCcceeeeeccCcchhhHhhhcCCceeecc
Q 012083 313 LAGQPFLCGVRPGFIN--GSSTNNPDGLVAKVADFGKMV-KWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWP 389 (471)
Q Consensus 313 ~~~~~~i~~~~~~~~~--~~~~~lp~~~~~~~~~nv~~~-~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P 389 (471)
.++++|||+++..... +....+|++|.+++.+++.++ +|+||.+||+|+++++|||||||||++||+++|||||++|
T Consensus 305 ~s~~~FlWv~r~~~~~~~~~~~~lp~~f~~~~~~rG~vv~~W~PQ~~IL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P 384 (472)
T PLN02670 305 KSETPFFWVLRNEPGTTQNALEMLPDGFEERVKGRGMIHVGWVPQVKILSHESVGGFLTHCGWNSVVEGLGFGRVLILFP 384 (472)
T ss_pred HCCCCEEEEEcCCcccccchhhcCChHHHHhccCCCeEEeCcCCHHHHhcCcccceeeecCCcchHHHHHHcCCCEEeCc
Confidence 9999999999853111 112368999999998888775 9999999999999999999999999999999999999999
Q ss_pred cccchhhhHHHHHhhhcceeeecCCC-CCCcCHhHHHHHHHHHhCcH---HHHHHHHHHHHHHHHHhhcCCChHHHHHHH
Q 012083 390 WGHDHLYIKSCICDDWKIGLWLEPDD-NGIIGRHEIKRKVDELLSND---VVRKNALKLKELAQKSVTKEGSSSKNLEYF 465 (471)
Q Consensus 390 ~~~DQ~~na~~v~~~~G~G~~~~~~~-~~~~~~~~l~~~i~~ll~~~---~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~ 465 (471)
++.||+.||+++++ +|+|+.+...+ .+.++.++|.++|+++|.|+ +||+||+++++++++ .+...+.++.|
T Consensus 385 ~~~DQ~~Na~~v~~-~g~Gv~l~~~~~~~~~~~e~i~~av~~vm~~~~g~~~r~~a~~l~~~~~~----~~~~~~~~~~~ 459 (472)
T PLN02670 385 VLNEQGLNTRLLHG-KKLGLEVPRDERDGSFTSDSVAESVRLAMVDDAGEEIRDKAKEMRNLFGD----MDRNNRYVDEL 459 (472)
T ss_pred chhccHHHHHHHHH-cCeeEEeeccccCCcCcHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHhC----cchhHHHHHHH
Confidence 99999999999998 79999996421 23589999999999999876 799999999999997 57888899999
Q ss_pred HHHHhC
Q 012083 466 IKQITE 471 (471)
Q Consensus 466 ~~~~~~ 471 (471)
++.+++
T Consensus 460 ~~~l~~ 465 (472)
T PLN02670 460 VHYLRE 465 (472)
T ss_pred HHHHHH
Confidence 988763
|
|
| >PLN02534 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-61 Score=477.93 Aligned_cols=434 Identities=26% Similarity=0.443 Sum_probs=321.2
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCC-----CCCCCC
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLP-----DGLEPE 91 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-----~~~~~~ 91 (471)
+.||+++|++++||++|++.||+.|+.+|+.|||++++.+...+........ .....++|+.+| +++++.
T Consensus 8 ~~Hvv~vPfpaqGHi~P~l~LAk~La~~G~~vT~v~t~~n~~~~~~~~~~~~-----~~~~~i~~~~lp~p~~~dglp~~ 82 (491)
T PLN02534 8 QLHFVLIPLMAQGHMIPMIDMARLLAERGVIVSLVTTPQNASRFAKTIDRAR-----ESGLPIRLVQIPFPCKEVGLPIG 82 (491)
T ss_pred CCEEEEECCCCcchHHHHHHHHHHHHhCCCeEEEEECCCcHHHHhhhhhhcc-----ccCCCeEEEEcCCCCccCCCCCC
Confidence 4799999999999999999999999999999999999988765554321100 111148999988 577654
Q ss_pred -CCcc-----cHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEEEeCchHHHHHHH
Q 012083 92 -DDRK-----DEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKASIYTSAPGILAMI 165 (471)
Q Consensus 92 -~~~~-----~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~ 165 (471)
+... .+...+......+.+.++++++.. . .+|++||+|.++.|+..+|+++|||.+.+++++++....+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lL~~~---~--~pp~cIV~D~f~~Wa~dVA~~lgIP~v~F~t~~a~~~~~~ 157 (491)
T PLN02534 83 CENLDTLPSRDLLRKFYDAVDKLQQPLERFLEQA---K--PPPSCIISDKCLSWTSKTAQRFNIPRIVFHGMCCFSLLSS 157 (491)
T ss_pred ccccccCCcHHHHHHHHHHHHHhHHHHHHHHHhc---C--CCCcEEEECCccHHHHHHHHHhCCCeEEEecchHHHHHHH
Confidence 2111 122222223334566777777642 1 4789999999999999999999999999999988877665
Q ss_pred hchhhhhhhCCCCCCcccccccccccCCCCCC---CCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhh
Q 012083 166 MNIPKFIEAGIISSDGIVIKNEKIELSPYLPA---ASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHEL 242 (471)
Q Consensus 166 ~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l 242 (471)
+++.. +. .... .+. ......+|+++. ++..+++ .+...... ...+..........++.+++||+.+|
T Consensus 158 ~~~~~-~~-~~~~---~~~-~~~~~~iPg~p~~~~l~~~dlp-~~~~~~~~---~~~~~~~~~~~~~~a~~vlvNTf~eL 227 (491)
T PLN02534 158 HNIRL-HN-AHLS---VSS-DSEPFVVPGMPQSIEITRAQLP-GAFVSLPD---LDDVRNKMREAESTAFGVVVNSFNEL 227 (491)
T ss_pred HHHHH-hc-cccc---CCC-CCceeecCCCCccccccHHHCC-hhhcCccc---HHHHHHHHHhhcccCCEEEEecHHHh
Confidence 43211 11 0110 111 111224677763 6666766 32221111 12222222222345779999999999
Q ss_pred chhhhhhC-----CCcceeccccCCCCCC------CCCCc-CcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHH
Q 012083 243 APSANKIL-----PSIIPVGPLIANGQPT------GNFWS-EDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALG 310 (471)
Q Consensus 243 ~~~~~~~~-----~~~~~vGp~~~~~~~~------~~~~~-~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~a 310 (471)
|+...... ++++.|||+....... ..... .+.+|.+||+.+++++||||||||+.....+++.+++.+
T Consensus 228 E~~~l~~l~~~~~~~v~~VGPL~~~~~~~~~~~~~~~~~~~~~~~cl~wLd~~~~~sVvyvsfGS~~~~~~~q~~e~a~g 307 (491)
T PLN02534 228 EHGCAEAYEKAIKKKVWCVGPVSLCNKRNLDKFERGNKASIDETQCLEWLDSMKPRSVIYACLGSLCRLVPSQLIELGLG 307 (491)
T ss_pred hHHHHHHHHhhcCCcEEEECcccccccccccccccCCccccchHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHH
Confidence 98766542 5799999997532100 00111 235699999999988999999999999999999999999
Q ss_pred HHhCCCCEEEEEcCCCCC-C-CCCCCCchhHHhhC-CCcEEEeccchhhhhccCcceeeeeccCcchhhHhhhcCCceee
Q 012083 311 LELAGQPFLCGVRPGFIN-G-SSTNNPDGLVAKVA-DFGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLC 387 (471)
Q Consensus 311 l~~~~~~~i~~~~~~~~~-~-~~~~lp~~~~~~~~-~nv~~~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~ 387 (471)
|+.++++|||+++..... + ....+|++|.+++. .++++.+|+||.+||+|+++++|||||||||++||+++|||||+
T Consensus 308 l~~~~~~flW~~r~~~~~~~~~~~~~p~gf~~~~~~~g~~v~~w~pq~~iL~h~~v~~fvtH~G~ns~~ea~~~GvP~v~ 387 (491)
T PLN02534 308 LEASKKPFIWVIKTGEKHSELEEWLVKENFEERIKGRGLLIKGWAPQVLILSHPAIGGFLTHCGWNSTIEGICSGVPMIT 387 (491)
T ss_pred HHhCCCCEEEEEecCccccchhhhcCchhhHHhhccCCeeccCCCCHHHHhcCCccceEEecCccHHHHHHHHcCCCEEe
Confidence 999999999999843111 1 11246899998864 55555699999999999999999999999999999999999999
Q ss_pred cccccchhhhHHHHHhhhcceeeecCC-------C-C-C-CcCHhHHHHHHHHHhC-----cHHHHHHHHHHHHHHHHHh
Q 012083 388 WPWGHDHLYIKSCICDDWKIGLWLEPD-------D-N-G-IIGRHEIKRKVDELLS-----NDVVRKNALKLKELAQKSV 452 (471)
Q Consensus 388 ~P~~~DQ~~na~~v~~~~G~G~~~~~~-------~-~-~-~~~~~~l~~~i~~ll~-----~~~~~~~a~~l~~~~~~~~ 452 (471)
+|++.||+.||+++++.||+|+.+..+ + . + .+++++|.++|+++|. ..++|+||++|+++.++++
T Consensus 388 ~P~~~dq~~na~~~~e~~~vGv~~~~~~~~~~~~~~~~~~~v~~eev~~~v~~~m~~~~eeg~~~R~rA~elk~~a~~Av 467 (491)
T PLN02534 388 WPLFAEQFLNEKLIVEVLRIGVRVGVEVPVRWGDEERVGVLVKKDEVEKAVKTLMDDGGEEGERRRRRAQELGVMARKAM 467 (491)
T ss_pred ccccccHHHHHHHHHHhhcceEEecccccccccccccccCccCHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHh
Confidence 999999999999998779999988521 0 0 1 4899999999999996 2489999999999999999
Q ss_pred hcCCChHHHHHHHHHHHh
Q 012083 453 TKEGSSSKNLEYFIKQIT 470 (471)
Q Consensus 453 ~~gg~~~~~~~~~~~~~~ 470 (471)
.+||||++++++||++++
T Consensus 468 ~~GGSS~~nl~~fv~~i~ 485 (491)
T PLN02534 468 ELGGSSHINLSILIQDVL 485 (491)
T ss_pred cCCCcHHHHHHHHHHHHH
Confidence 999999999999999886
|
|
| >PLN00414 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-61 Score=471.95 Aligned_cols=411 Identities=22% Similarity=0.380 Sum_probs=307.3
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCC----CCCCCC
Q 012083 16 TNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLP----DGLEPE 91 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~----~~~~~~ 91 (471)
++.||+++|++++||++|++.||+.|+.+|++|||++++.+...+.+.. ...++++|..++ +++++.
T Consensus 3 ~~~HVvlvPfpaqGHi~PmL~LAk~Las~G~~VT~vtt~~~~~~i~~~~---------~~~~~i~~~~i~lP~~dGLP~g 73 (446)
T PLN00414 3 SKFHAFMYPWFGFGHMIPYLHLANKLAEKGHRVTFFLPKKAHKQLQPLN---------LFPDSIVFEPLTLPPVDGLPFG 73 (446)
T ss_pred CCCEEEEecCcccchHHHHHHHHHHHHhCCCEEEEEeCCchhhhhcccc---------cCCCceEEEEecCCCcCCCCCc
Confidence 3579999999999999999999999999999999999998876665431 111258885543 566554
Q ss_pred C-CcccHHH----HHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEEEeCchHHHHHHHh
Q 012083 92 D-DRKDEAK----MTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKASIYTSAPGILAMIM 166 (471)
Q Consensus 92 ~-~~~~~~~----~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~ 166 (471)
. ...++.. .+......+.+.++++++. .+||+||+|. +.|+..+|+++|||++.++++++.....+.
T Consensus 74 ~e~~~~l~~~~~~~~~~a~~~l~~~l~~~L~~-------~~p~cVV~D~-~~wa~~vA~~lgIP~~~F~~~~a~~~~~~~ 145 (446)
T PLN00414 74 AETASDLPNSTKKPIFDAMDLLRDQIEAKVRA-------LKPDLIFFDF-VHWVPEMAKEFGIKSVNYQIISAACVAMVL 145 (446)
T ss_pred ccccccchhhHHHHHHHHHHHHHHHHHHHHhc-------CCCeEEEECC-chhHHHHHHHhCCCEEEEecHHHHHHHHHh
Confidence 2 2212211 1222222344444444443 6889999995 789999999999999999999998887766
Q ss_pred chhhhhhhCCCCCCcccccccccccCCCCCC----CCccccCC-CCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhh
Q 012083 167 NIPKFIEAGIISSDGIVIKNEKIELSPYLPA----ASPAEFLW-NCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHE 241 (471)
Q Consensus 167 ~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~ 241 (471)
+ +. ... + ..+|++|. ++..+... .++.. ....+.+..+...+++.+++||+.+
T Consensus 146 ~-~~--~~~-----~--------~~~pg~p~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~vlvNTf~e 203 (446)
T PLN00414 146 A-PR--AEL-----G--------FPPPDYPLSKVALRGHDANVCSLFAN------SHELFGLITKGLKNCDVVSIRTCVE 203 (446)
T ss_pred C-cH--hhc-----C--------CCCCCCCCCcCcCchhhcccchhhcc------cHHHHHHHHHhhccCCEEEEechHH
Confidence 5 21 100 0 01244432 22121110 11110 1123334445567899999999999
Q ss_pred hchhhhhhC-----CCcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHHHHhCCC
Q 012083 242 LAPSANKIL-----PSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELAGQ 316 (471)
Q Consensus 242 l~~~~~~~~-----~~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~ 316 (471)
||+...... ++++.|||+.+..... .....+.+|.+|||.+++++||||||||+...+.+++.+++.+|+..+.
T Consensus 204 LE~~~~~~~~~~~~~~v~~VGPl~~~~~~~-~~~~~~~~~~~WLD~q~~~sVvyvsfGS~~~~~~~q~~e~a~gL~~s~~ 282 (446)
T PLN00414 204 LEGNLCDFIERQCQRKVLLTGPMLPEPQNK-SGKPLEDRWNHWLNGFEPGSVVFCAFGTQFFFEKDQFQEFCLGMELTGL 282 (446)
T ss_pred HHHHHHHHHHHhcCCCeEEEcccCCCcccc-cCcccHHHHHHHHhcCCCCceEEEeecccccCCHHHHHHHHHHHHHcCC
Confidence 999776643 4689999997543210 1112345689999999999999999999999999999999999999999
Q ss_pred CEEEEEcCCCCC-CCCCCCCchhHHhhCCCcEEE-eccchhhhhccCcceeeeeccCcchhhHhhhcCCceeecccccch
Q 012083 317 PFLCGVRPGFIN-GSSTNNPDGLVAKVADFGKMV-KWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDH 394 (471)
Q Consensus 317 ~~i~~~~~~~~~-~~~~~lp~~~~~~~~~nv~~~-~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ 394 (471)
+|+|++...... .....+|++|.+++.++.+++ +|+||.+||+|+++++|||||||||++||+++|||||++|++.||
T Consensus 283 ~Flwvvr~~~~~~~~~~~lp~~f~~r~~~~g~vv~~w~PQ~~vL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~dQ 362 (446)
T PLN00414 283 PFLIAVMPPKGSSTVQEALPEGFEERVKGRGIVWEGWVEQPLILSHPSVGCFVNHCGFGSMWESLVSDCQIVFIPQLADQ 362 (446)
T ss_pred CeEEEEecCCCcccchhhCChhHHHHhcCCCeEEeccCCHHHHhcCCccceEEecCchhHHHHHHHcCCCEEecCcccch
Confidence 999999864221 123469999999999999887 999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcH-----HHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHH
Q 012083 395 LYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSND-----VVRKNALKLKELAQKSVTKEGSSSKNLEYFIKQI 469 (471)
Q Consensus 395 ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~-----~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~ 469 (471)
+.||+++++.+|+|+.+..++.+.+++++|.++++++|.|+ ++|++++++++.+.+ +||+| ..+++||+++
T Consensus 363 ~~na~~~~~~~g~g~~~~~~~~~~~~~~~i~~~v~~~m~~~~e~g~~~r~~a~~~~~~~~~---~gg~s-s~l~~~v~~~ 438 (446)
T PLN00414 363 VLITRLLTEELEVSVKVQREDSGWFSKESLRDTVKSVMDKDSEIGNLVKRNHKKLKETLVS---PGLLS-GYADKFVEAL 438 (446)
T ss_pred HHHHHHHHHHhCeEEEeccccCCccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHc---CCCcH-HHHHHHHHHH
Confidence 99999997448999999642113589999999999999764 499999999999744 47734 3389999987
Q ss_pred h
Q 012083 470 T 470 (471)
Q Consensus 470 ~ 470 (471)
+
T Consensus 439 ~ 439 (446)
T PLN00414 439 E 439 (446)
T ss_pred H
Confidence 5
|
|
| >PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-52 Score=417.14 Aligned_cols=402 Identities=15% Similarity=0.144 Sum_probs=275.2
Q ss_pred cEEEEE-cCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCC----C
Q 012083 18 VHVLLV-SFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPE----D 92 (471)
Q Consensus 18 ~~Il~~-~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~----~ 92 (471)
.||+.+ |.++.||+..+.+|+++|++|||+||++++..... ... ....+++.+.++...+.. .
T Consensus 21 ~kIl~~~P~~~~SH~~~~~~l~~~La~rGH~VTvi~p~~~~~-~~~-----------~~~~~~~~i~~~~~~~~~~~~~~ 88 (507)
T PHA03392 21 ARILAVFPTPAYSHHSVFKVYVEALAERGHNVTVIKPTLRVY-YAS-----------HLCGNITEIDASLSVEYFKKLVK 88 (507)
T ss_pred ccEEEEcCCCCCcHHHHHHHHHHHHHHcCCeEEEEecccccc-ccc-----------CCCCCEEEEEcCCChHHHHHHHh
Confidence 578755 88999999999999999999999999997753211 100 011266666654211110 0
Q ss_pred Cc------c---cHHHH----HHHHHhhc-----cHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHc-CCceEE
Q 012083 93 DR------K---DEAKM----TRSISKVM-----PGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKL-ELKKAS 153 (471)
Q Consensus 93 ~~------~---~~~~~----~~~~~~~~-----~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~l-giP~v~ 153 (471)
.. . +...+ ...+...+ .+.+.+++ +... .++|+||+|.+..|+..+|+++ ++|+|.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L---~~~~--~kFDlvi~e~~~~c~~~la~~~~~~p~i~ 163 (507)
T PHA03392 89 SSAVFRKRGVVADSSTVTADNYMGLVRMISDQFDLPNVKNLI---ANKN--NKFDLLVTEAFLDYPLVFSHLFGDAPVIQ 163 (507)
T ss_pred hhhHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHCCHHHHHHH---hcCC--CceeEEEecccchhHHHHHHHhCCCCEEE
Confidence 00 0 00011 11111122 22223333 2111 7899999999888999999999 999998
Q ss_pred EeCchHHHHHHHhchhhhhhhCCCCCCcccccccccccCCCCCCCCccccCCCCC-----------CCCCchhHHHHHHH
Q 012083 154 IYTSAPGILAMIMNIPKFIEAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCP-----------GNPSLQTLMFQYIN 222 (471)
Q Consensus 154 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~ 222 (471)
++++..................++|.+..... ..+.+.+...+++ .....++...+++.
T Consensus 164 ~ss~~~~~~~~~~~gg~p~~~syvP~~~~~~~----------~~Msf~~R~~N~~~~~~~~~~~~~~~~~~~~l~~~~f~ 233 (507)
T PHA03392 164 ISSGYGLAENFETMGAVSRHPVYYPNLWRSKF----------GNLNVWETINEIYTELRLYNEFSLLADEQNKLLKQQFG 233 (507)
T ss_pred EcCCCCchhHHHhhccCCCCCeeeCCcccCCC----------CCCCHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHcC
Confidence 88865543221110001111112221110000 0111111000100 00122223333332
Q ss_pred H----HHhhhccCcEEEEcchhhhchhhhhhCCCcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccc-
Q 012083 223 V----IRQNIEASDRILCTWFHELAPSANKILPSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSIS- 297 (471)
Q Consensus 223 ~----~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~- 297 (471)
. +.+...+.+++++|+++.++++ ++++|++++|||+..+.. ...+.+.++.+|++.++ +++|||||||+.
T Consensus 234 ~~~~~~~~l~~~~~l~lvns~~~~d~~-rp~~p~v~~vGgi~~~~~---~~~~l~~~l~~fl~~~~-~g~V~vS~GS~~~ 308 (507)
T PHA03392 234 PDTPTIRELRNRVQLLFVNVHPVFDNN-RPVPPSVQYLGGLHLHKK---PPQPLDDYLEEFLNNST-NGVVYVSFGSSID 308 (507)
T ss_pred CCCCCHHHHHhCCcEEEEecCccccCC-CCCCCCeeeecccccCCC---CCCCCCHHHHHHHhcCC-CcEEEEECCCCCc
Confidence 1 2233467789999999999998 899999999999987542 22356778889999865 469999999984
Q ss_pred --cCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCCchhHHhhCCCcEEEeccchhhhhccCcceeeeeccCcchh
Q 012083 298 --KLSQQQFNELALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWNST 375 (471)
Q Consensus 298 --~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~ItHgG~~s~ 375 (471)
..+.+.++.+++|+++.+.+|||+.++. ..+ ...|+|+++++|+||.+||+||+|++||||||+||+
T Consensus 309 ~~~~~~~~~~~~l~a~~~l~~~viw~~~~~-------~~~----~~~p~Nv~i~~w~Pq~~lL~hp~v~~fItHGG~~s~ 377 (507)
T PHA03392 309 TNDMDNEFLQMLLRTFKKLPYNVLWKYDGE-------VEA----INLPANVLTQKWFPQRAVLKHKNVKAFVTQGGVQST 377 (507)
T ss_pred CCCCCHHHHHHHHHHHHhCCCeEEEEECCC-------cCc----ccCCCceEEecCCCHHHHhcCCCCCEEEecCCcccH
Confidence 3578889999999999999999999754 111 124789999999999999999999999999999999
Q ss_pred hHhhhcCCceeecccccchhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHhhcC
Q 012083 376 MEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKELAQKSVTKE 455 (471)
Q Consensus 376 ~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~~~~~g 455 (471)
+||+++|||||++|++.||+.||+|+++ +|+|+.+++ ..++.++|.++|+++|+|++||+||+++++.+++. .
T Consensus 378 ~Eal~~GvP~v~iP~~~DQ~~Na~rv~~-~G~G~~l~~---~~~t~~~l~~ai~~vl~~~~y~~~a~~ls~~~~~~---p 450 (507)
T PHA03392 378 DEAIDALVPMVGLPMMGDQFYNTNKYVE-LGIGRALDT---VTVSAAQLVLAIVDVIENPKYRKNLKELRHLIRHQ---P 450 (507)
T ss_pred HHHHHcCCCEEECCCCccHHHHHHHHHH-cCcEEEecc---CCcCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhC---C
Confidence 9999999999999999999999999999 799999986 77899999999999999999999999999999984 3
Q ss_pred CChHHHHHHHHHHH
Q 012083 456 GSSSKNLEYFIKQI 469 (471)
Q Consensus 456 g~~~~~~~~~~~~~ 469 (471)
-+..+.+..-++.+
T Consensus 451 ~~~~~~av~~iE~v 464 (507)
T PHA03392 451 MTPLHKAIWYTEHV 464 (507)
T ss_pred CCHHHHHHHHHHHH
Confidence 33444444444443
|
|
| >PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-51 Score=419.63 Aligned_cols=378 Identities=24% Similarity=0.306 Sum_probs=228.6
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCCc---c
Q 012083 19 HVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDDR---K 95 (471)
Q Consensus 19 ~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~---~ 95 (471)
||+++|. ++||+.++..|+++|++|||+||++++.... .+.. .....+++..++......+.. .
T Consensus 2 kvLv~p~-~~SH~~~~~~l~~~L~~rGH~VTvl~~~~~~-~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (500)
T PF00201_consen 2 KVLVFPM-AYSHFIFMRPLAEELAERGHNVTVLTPSPSS-SLNP-----------SKPSNIRFETYPDPYPEEEFEEIFP 68 (500)
T ss_dssp -----------SHHHHHHHHHHHHHH-TTSEEEHHHHHH-T-----------------S-CCEEEE-----TT------T
T ss_pred EEEEeCC-CcCHHHHHHHHHHHHHhcCCceEEEEeeccc-cccc-----------ccccceeeEEEcCCcchHHHhhhhH
Confidence 7888885 7899999999999999999999999875432 2221 112266776666554433111 1
Q ss_pred cH--------------HHHHHH---HHhhccHHHH------HHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceE
Q 012083 96 DE--------------AKMTRS---ISKVMPGYLE------ELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKA 152 (471)
Q Consensus 96 ~~--------------~~~~~~---~~~~~~~~~~------~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v 152 (471)
.. ...+.. +.......++ ++++.++. .++|++|+|.+..|+..+|+.+++|.+
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~l~d~~l~~~l~~----~~fDlvI~d~f~~c~~~la~~l~iP~i 144 (500)
T PF00201_consen 69 EFISKFFSESSFANSFWEMFKMLNAFFDFFSKSCEDLLSDPELMEQLKS----EKFDLVISDAFDPCGLALAHYLGIPVI 144 (500)
T ss_dssp THHHHHHHHHCCHHHHHHHHHHHHCHHHS----E--EEEETTSTTHHHH----HHHCT-EEEEEESSHHHHHHHHHHTHH
T ss_pred HHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHh----hccccceEeeccchhHHHHHHhcCCeE
Confidence 10 111111 1111111221 22222333 689999999998899999999999998
Q ss_pred EEeCchHHHHHHHhchhhhhhhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCc-hhHHHHHHHH--------
Q 012083 153 SIYTSAPGILAMIMNIPKFIEAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSL-QTLMFQYINV-------- 223 (471)
Q Consensus 153 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-------- 223 (471)
.+.++.+....... . .+.|. ...++|....-....+. .+.+..+. ......+..+
T Consensus 145 ~~~s~~~~~~~~~~-------~-----~g~p~---~psyvP~~~s~~~~~ms-f~~Ri~N~l~~~~~~~~~~~~~~~~~~ 208 (500)
T PF00201_consen 145 IISSSTPMYDLSSF-------S-----GGVPS---PPSYVPSMFSDFSDRMS-FWQRIKNFLFYLYFRFIFRYFFSPQDK 208 (500)
T ss_dssp HHHHCCSCSCCTCC-------T-----SCCCT---STTSTTCBCCCSGTTSS-SST--TTSHHHHHHHHHHHHGGGS-TT
T ss_pred EEecccccchhhhh-------c-----cCCCC---ChHHhccccccCCCccc-hhhhhhhhhhhhhhccccccchhhHHH
Confidence 76443322100000 0 00110 00111211100000000 01000110 1111111111
Q ss_pred -----------HHhhhccCcEEEEcchhhhchhhhhhCCCcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEe
Q 012083 224 -----------IRQNIEASDRILCTWFHELAPSANKILPSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAA 292 (471)
Q Consensus 224 -----------~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs 292 (471)
..+.+...+.+++|+++.++++ ++.+|++.+||++..+++ .+.+.++..|++...++++||||
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~l~l~ns~~~ld~p-rp~~p~v~~vGgl~~~~~-----~~l~~~~~~~~~~~~~~~vv~vs 282 (500)
T PF00201_consen 209 LYKKYFGFPFSFRELLSNASLVLINSHPSLDFP-RPLLPNVVEVGGLHIKPA-----KPLPEELWNFLDSSGKKGVVYVS 282 (500)
T ss_dssp S-EEESS-GGGCHHHHHHHHHCCSSTEEE-----HHHHCTSTTGCGC-S---------TCHHHHHHHTSTTTTTEEEEEE
T ss_pred HHhhhcccccccHHHHHHHHHHhhhccccCcCC-cchhhcccccCccccccc-----cccccccchhhhccCCCCEEEEe
Confidence 1122345677899999999988 899999999999987654 24567788999985567899999
Q ss_pred cCccccCCHH-HHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCCchhHHhhCCCcEEEeccchhhhhccCcceeeeeccC
Q 012083 293 FGSISKLSQQ-QFNELALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCG 371 (471)
Q Consensus 293 ~GS~~~~~~~-~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~ItHgG 371 (471)
|||+....++ .++.++++|++++++|||++.+. +.. ..++|+++++|+||.+||+||++++||||||
T Consensus 283 fGs~~~~~~~~~~~~~~~~~~~~~~~~iW~~~~~---------~~~---~l~~n~~~~~W~PQ~~lL~hp~v~~fitHgG 350 (500)
T PF00201_consen 283 FGSIVSSMPEEKLKEIAEAFENLPQRFIWKYEGE---------PPE---NLPKNVLIVKWLPQNDLLAHPRVKLFITHGG 350 (500)
T ss_dssp -TSSSTT-HHHHHHHHHHHHHCSTTEEEEEETCS---------HGC---HHHTTEEEESS--HHHHHTSTTEEEEEES--
T ss_pred cCcccchhHHHHHHHHHHHHhhCCCccccccccc---------ccc---cccceEEEeccccchhhhhcccceeeeeccc
Confidence 9998654444 47889999999999999999753 122 2478999999999999999999999999999
Q ss_pred cchhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHH
Q 012083 372 WNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKELAQKS 451 (471)
Q Consensus 372 ~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~~ 451 (471)
+||+.||+++|||||++|+++||+.||+++++ .|+|+.++. ..+|.++|.++|+++|+|++|++||+++++.+++.
T Consensus 351 ~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~-~G~g~~l~~---~~~~~~~l~~ai~~vl~~~~y~~~a~~ls~~~~~~ 426 (500)
T PF00201_consen 351 LNSTQEALYHGVPMLGIPLFGDQPRNAARVEE-KGVGVVLDK---NDLTEEELRAAIREVLENPSYKENAKRLSSLFRDR 426 (500)
T ss_dssp HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHH-TTSEEEEGG---GC-SHHHHHHHHHHHHHSHHHHHHHHHHHHTTT--
T ss_pred cchhhhhhhccCCccCCCCcccCCccceEEEE-EeeEEEEEe---cCCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999 699999996 78999999999999999999999999999999874
|
This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A .... |
| >TIGR01426 MGT glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-44 Score=356.15 Aligned_cols=374 Identities=18% Similarity=0.253 Sum_probs=264.2
Q ss_pred EcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCCc-----ccH
Q 012083 23 VSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDDR-----KDE 97 (471)
Q Consensus 23 ~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-----~~~ 97 (471)
+.+|+.||++|+++||++|+++||+|+|++++.+.+.+++. |+.|.+++......... .+.
T Consensus 1 ~~~p~~Ghv~P~l~lA~~L~~~Gh~V~~~~~~~~~~~v~~~--------------G~~~~~~~~~~~~~~~~~~~~~~~~ 66 (392)
T TIGR01426 1 FNIPAHGHVNPTLGVVEELVARGHRVTYATTEEFAERVEAA--------------GAEFVLYGSALPPPDNPPENTEEEP 66 (392)
T ss_pred CCCCccccccccHHHHHHHHhCCCeEEEEeCHHHHHHHHHc--------------CCEEEecCCcCccccccccccCcch
Confidence 35799999999999999999999999999999999999887 88998888654432111 233
Q ss_pred HHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEEEeCchHHHHHHHhchhhhhhhCCC
Q 012083 98 AKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKASIYTSAPGILAMIMNIPKFIEAGII 177 (471)
Q Consensus 98 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~ 177 (471)
...++.+.......+..+.+.+.. .+||+||+|.++.++..+|+.+|||+|.+++...... ..+...
T Consensus 67 ~~~~~~~~~~~~~~~~~l~~~~~~----~~pDlVi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~----~~~~~~----- 133 (392)
T TIGR01426 67 IDIIEKLLDEAEDVLPQLEEAYKG----DRPDLIVYDIASWTGRLLARKWDVPVISSFPTFAANE----EFEEMV----- 133 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcC----CCCCEEEECCccHHHHHHHHHhCCCEEEEehhhcccc----cccccc-----
Confidence 344444444444444444444444 8999999999888999999999999999865432210 000000
Q ss_pred CCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHh----------h--hccCcEEEEcchhhhchh
Q 012083 178 SSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQ----------N--IEASDRILCTWFHELAPS 245 (471)
Q Consensus 178 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~--~~~~~~~l~~s~~~l~~~ 245 (471)
+ + ..+.+. ...... . .. .+.+.+.+.+... . ....+..++.+.+.|+++
T Consensus 134 ~----~-------~~~~~~--~~~~~~-~----~~-~~~~~~~~~~~r~~~gl~~~~~~~~~~~~~~~~l~~~~~~l~~~ 194 (392)
T TIGR01426 134 S----P-------AGEGSA--EEGAIA-E----RG-LAEYVARLSALLEEHGITTPPVEFLAAPRRDLNLVYTPKAFQPA 194 (392)
T ss_pred c----c-------cchhhh--hhhccc-c----ch-hHHHHHHHHHHHHHhCCCCCCHHHHhcCCcCcEEEeCChHhCCC
Confidence 0 0 000000 000000 0 00 0111111111111 1 123334677778888876
Q ss_pred hhhhCCCcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHHHHhCCCCEEEEEcCC
Q 012083 246 ANKILPSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELAGQPFLCGVRPG 325 (471)
Q Consensus 246 ~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~ 325 (471)
...++++++++||+..+... ...|....+++++||||+||+.......+..+++++.+.+.+++|.++..
T Consensus 195 ~~~~~~~~~~~Gp~~~~~~~----------~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~g~~ 264 (392)
T TIGR01426 195 GETFDDSFTFVGPCIGDRKE----------DGSWERPGDGRPVVLISLGTVFNNQPSFYRTCVEAFRDLDWHVVLSVGRG 264 (392)
T ss_pred ccccCCCeEEECCCCCCccc----------cCCCCCCCCCCCEEEEecCccCCCCHHHHHHHHHHHhcCCCeEEEEECCC
Confidence 55678899999998754321 11366655667899999999866677788889999999999999988654
Q ss_pred CCCCCCCCCCchhHHhhCCCcEEEeccchhhhhccCcceeeeeccCcchhhHhhhcCCceeecccccchhhhHHHHHhhh
Q 012083 326 FINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDW 405 (471)
Q Consensus 326 ~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~ 405 (471)
.. ... ....++|+.+.+|+||.++|+++++ ||||||+||++||+++|+|+|++|...||..||.++++ +
T Consensus 265 ~~-------~~~-~~~~~~~v~~~~~~p~~~ll~~~~~--~I~hgG~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~-~ 333 (392)
T TIGR01426 265 VD-------PAD-LGELPPNVEVRQWVPQLEILKKADA--FITHGGMNSTMEALFNGVPMVAVPQGADQPMTARRIAE-L 333 (392)
T ss_pred CC-------hhH-hccCCCCeEEeCCCCHHHHHhhCCE--EEECCCchHHHHHHHhCCCEEecCCcccHHHHHHHHHH-C
Confidence 10 111 1224688999999999999977766 99999999999999999999999999999999999999 7
Q ss_pred cceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHh
Q 012083 406 KIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKELAQKSVTKEGSSSKNLEYFIKQIT 470 (471)
Q Consensus 406 G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~ 470 (471)
|+|..+.. ..++.++|.++|+++|+|++|+++++++++++++. ++...+.+.+.+.+.
T Consensus 334 g~g~~l~~---~~~~~~~l~~ai~~~l~~~~~~~~~~~l~~~~~~~----~~~~~aa~~i~~~~~ 391 (392)
T TIGR01426 334 GLGRHLPP---EEVTAEKLREAVLAVLSDPRYAERLRKMRAEIREA----GGARRAADEIEGFLA 391 (392)
T ss_pred CCEEEecc---ccCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHc----CCHHHHHHHHHHhhc
Confidence 99999874 67899999999999999999999999999999874 344444444444433
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. |
| >cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-45 Score=360.93 Aligned_cols=378 Identities=16% Similarity=0.142 Sum_probs=257.0
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCC-----
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPED----- 92 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~----- 92 (471)
|||+|++.|+.||++|+++||++|++|||+|+|++++.+...+++. |+.|.++++......
T Consensus 1 mrIl~~~~p~~GHv~P~l~la~~L~~rGh~V~~~t~~~~~~~v~~~--------------G~~~~~~~~~~~~~~~~~~~ 66 (401)
T cd03784 1 MRVLITTIGSRGDVQPLVALAWALRAAGHEVRVATPPEFADLVEAA--------------GLEFVPVGGDPDELLASPER 66 (401)
T ss_pred CeEEEEeCCCcchHHHHHHHHHHHHHCCCeEEEeeCHhHHHHHHHc--------------CCceeeCCCCHHHHHhhhhh
Confidence 5999999999999999999999999999999999999999888876 899998876432210
Q ss_pred -------CcccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEEEeCchHHHHHHH
Q 012083 93 -------DRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKASIYTSAPGILAMI 165 (471)
Q Consensus 93 -------~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~ 165 (471)
...........+.......++++++.++. ++||+||+|.+..++..+|+++|||++.+++++.......
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~pDlvi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~ 142 (401)
T cd03784 67 NAGLLLLGPGLLLGALRLLRREAEAMLDDLVAAARD----WGPDLVVADPLAFAGAVAAEALGIPAVRLLLGPDTPTSAF 142 (401)
T ss_pred cccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcc----cCCCEEEeCcHHHHHHHHHHHhCCCeEEeecccCCccccC
Confidence 01112222333444444555555555444 8999999999888999999999999999988664421110
Q ss_pred hchhhhhhhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhc---------cCcEEEE
Q 012083 166 MNIPKFIEAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIE---------ASDRILC 236 (471)
Q Consensus 166 ~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~l~ 236 (471)
.+ ..... . ...+.................+....+. ..+..+.
T Consensus 143 ~~--------------------------~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~ 194 (401)
T cd03784 143 PP--------------------------PLGRA-N-LRLYALLEAELWQDLLGAWLRARRRRLGLPPLSLLDGSDVPELY 194 (401)
T ss_pred CC--------------------------ccchH-H-HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCCcEEE
Confidence 00 00000 0 0000000000000001111111111111 1223344
Q ss_pred cchhhhchhhhhhCCCcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccCC-HHHHHHHHHHHHhCC
Q 012083 237 TWFHELAPSANKILPSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLS-QQQFNELALGLELAG 315 (471)
Q Consensus 237 ~s~~~l~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~-~~~~~~~~~al~~~~ 315 (471)
...+.+..+..+++++..++|......+ .....+.++..|++.. +++|||++||+.... ...+..+++++...+
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~---~~~~~~~~~~~~~~~~--~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~~ 269 (401)
T cd03784 195 GFSPAVLPPPPDWPRFDLVTGYGFRDVP---YNGPPPPELWLFLAAG--RPPVYVGFGSMVVRDPEALARLDVEAVATLG 269 (401)
T ss_pred ecCcccCCCCCCccccCcEeCCCCCCCC---CCCCCCHHHHHHHhCC--CCcEEEeCCCCcccCHHHHHHHHHHHHHHcC
Confidence 4444444343566677778763333222 1223456666787663 569999999987644 456777999999999
Q ss_pred CCEEEEEcCCCCCCCCCCCCchhHHhhCCCcEEEeccchhhhhccCcceeeeeccCcchhhHhhhcCCceeecccccchh
Q 012083 316 QPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHL 395 (471)
Q Consensus 316 ~~~i~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~ 395 (471)
.++||+++... ... ...++|+++.+|+||.++|.|+++ ||||||+||++|++++|||+|++|+..||+
T Consensus 270 ~~~i~~~g~~~-------~~~---~~~~~~v~~~~~~p~~~ll~~~d~--~I~hgG~~t~~eal~~GvP~v~~P~~~dQ~ 337 (401)
T cd03784 270 QRAILSLGWGG-------LGA---EDLPDNVRVVDFVPHDWLLPRCAA--VVHHGGAGTTAAALRAGVPQLVVPFFGDQP 337 (401)
T ss_pred CeEEEEccCcc-------ccc---cCCCCceEEeCCCCHHHHhhhhhe--eeecCCchhHHHHHHcCCCEEeeCCCCCcH
Confidence 99999997651 001 234789999999999999977555 999999999999999999999999999999
Q ss_pred hhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHH
Q 012083 396 YIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKELAQKSVTKEGSSSKNLEYFIKQ 468 (471)
Q Consensus 396 ~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~ 468 (471)
.||+++++ +|+|+.+.. ..++.++|.++++++|++ .++++++++++.+++. .+...+.++|++
T Consensus 338 ~~a~~~~~-~G~g~~l~~---~~~~~~~l~~al~~~l~~-~~~~~~~~~~~~~~~~-----~g~~~~~~~ie~ 400 (401)
T cd03784 338 FWAARVAE-LGAGPALDP---RELTAERLAAALRRLLDP-PSRRRAAALLRRIREE-----DGVPSAADVIER 400 (401)
T ss_pred HHHHHHHH-CCCCCCCCc---ccCCHHHHHHHHHHHhCH-HHHHHHHHHHHHHHhc-----cCHHHHHHHHhh
Confidence 99999999 799999975 558999999999999986 4667777787777653 344555555543
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
| >COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-42 Score=338.22 Aligned_cols=381 Identities=17% Similarity=0.212 Sum_probs=248.6
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCCcccH
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDDRKDE 97 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 97 (471)
|||+|+..|+.||++|+++||++|.++||+|+|+|++.+++.+++. |+.|..++............
T Consensus 2 mkil~~~~~~~Ghv~p~~aL~~eL~~~gheV~~~~~~~~~~~ve~a--------------g~~f~~~~~~~~~~~~~~~~ 67 (406)
T COG1819 2 MKILFVVCGAYGHVNPCLALGKELRRRGHEVVFASTGKFKEFVEAA--------------GLAFVAYPIRDSELATEDGK 67 (406)
T ss_pred ceEEEEeccccccccchHHHHHHHHhcCCeEEEEeCHHHHHHHHHh--------------CcceeeccccCChhhhhhhh
Confidence 8999999999999999999999999999999999999999999998 77777766542212111111
Q ss_pred HHHHHH---HHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEEEeCchHHHHHHHh-chhhhhh
Q 012083 98 AKMTRS---ISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKASIYTSAPGILAMIM-NIPKFIE 173 (471)
Q Consensus 98 ~~~~~~---~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~-~~p~~~~ 173 (471)
....+. ..........++++-+.+ ..||+++.|...+.+ .+++..++|++.......+...... +.+....
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~e----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (406)
T COG1819 68 FAGVKSFRRLLQQFKKLIRELLELLRE----LEPDLVVDDARLSLG-LAARLLGIPVVGINVAPYTPLPAAGLPLPPVGI 142 (406)
T ss_pred hhccchhHHHhhhhhhhhHHHHHHHHh----cchhhhhcchhhhhh-hhhhhcccchhhhhhhhccCCcccccCcccccc
Confidence 111121 222222333444444444 899999988776544 8999999999886554433211111 1000000
Q ss_pred hCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHH-----------Hhhhcc-CcEEEEcchhh
Q 012083 174 AGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVI-----------RQNIEA-SDRILCTWFHE 241 (471)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-~~~~l~~s~~~ 241 (471)
.+.. ..+..+ +..... .+....... ......+. ...... ....+......
T Consensus 143 ~~~~-------------~~~~~~-~~~~~~--~~~~~~~~~--~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (406)
T COG1819 143 AGKL-------------PIPLYP-LPPRLV--RPLIFARSW--LPKLVVRRNLGLELGLPNIRRLFASGPLLEIAYTDVL 204 (406)
T ss_pred cccc-------------cccccc-cChhhc--cccccchhh--hhhhhhhhhccccccccchHHHhcCCCCccccccccc
Confidence 0000 000000 000000 000000000 00000000 011111 11111111111
Q ss_pred hchhhhhhCCCcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHHHHhCCCCEEEE
Q 012083 242 LAPSANKILPSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELAGQPFLCG 321 (471)
Q Consensus 242 l~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~ 321 (471)
+.+. ...+....++||+...... ++..| ...++++||+|+||.... .+.+..+++++..++.++|+.
T Consensus 205 ~~~~-~~~p~~~~~~~~~~~~~~~---------~~~~~--~~~d~~~vyvslGt~~~~-~~l~~~~~~a~~~l~~~vi~~ 271 (406)
T COG1819 205 FPPG-DRLPFIGPYIGPLLGEAAN---------ELPYW--IPADRPIVYVSLGTVGNA-VELLAIVLEALADLDVRVIVS 271 (406)
T ss_pred cCCC-CCCCCCcCccccccccccc---------cCcch--hcCCCCeEEEEcCCcccH-HHHHHHHHHHHhcCCcEEEEe
Confidence 1110 2234455667766655431 11123 234577999999998766 888999999999999999999
Q ss_pred EcCCCCCCCCCCCCchhHHhhCCCcEEEeccchhhhhccCcceeeeeccCcchhhHhhhcCCceeecccccchhhhHHHH
Q 012083 322 VRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCI 401 (471)
Q Consensus 322 ~~~~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v 401 (471)
+++. +.-....++|+++.+|+||.++|+++++ ||||||+|||+|||++|||+|++|...||+.||.|+
T Consensus 272 ~~~~----------~~~~~~~p~n~~v~~~~p~~~~l~~ad~--vI~hGG~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rv 339 (406)
T COG1819 272 LGGA----------RDTLVNVPDNVIVADYVPQLELLPRADA--VIHHGGAGTTSEALYAGVPLVVIPDGADQPLNAERV 339 (406)
T ss_pred cccc----------ccccccCCCceEEecCCCHHHHhhhcCE--EEecCCcchHHHHHHcCCCEEEecCCcchhHHHHHH
Confidence 8752 0011234788999999999999966666 999999999999999999999999999999999999
Q ss_pred HhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHH
Q 012083 402 CDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKELAQKSVTKEGSSSKNLEYFIKQI 469 (471)
Q Consensus 402 ~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~ 469 (471)
++ +|+|..+.. ..++.+.|+++|+++|.|+.|+++++++++.+++. +| .+...+.|++.
T Consensus 340 e~-~G~G~~l~~---~~l~~~~l~~av~~vL~~~~~~~~~~~~~~~~~~~---~g--~~~~a~~le~~ 398 (406)
T COG1819 340 EE-LGAGIALPF---EELTEERLRAAVNEVLADDSYRRAAERLAEEFKEE---DG--PAKAADLLEEF 398 (406)
T ss_pred HH-cCCceecCc---ccCCHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhc---cc--HHHHHHHHHHH
Confidence 99 799999986 78999999999999999999999999999999986 44 45566666553
|
|
| >KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-42 Score=349.86 Aligned_cols=413 Identities=27% Similarity=0.374 Sum_probs=261.9
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCCcc-
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDDRK- 95 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~- 95 (471)
+.+++++++|++||++|+..+|+.|+++||+||++++.......... ........ .....+.+...+++++......
T Consensus 5 ~~~~il~~~p~~sH~~~~~~la~~L~~~gh~vt~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 82 (496)
T KOG1192|consen 5 KAHNILVPFPGQSHLNPMLQLAKRLAERGHNVTVVTPSFNALKLSKS-SKSKSIKK-INPPPFEFLTIPDGLPEGWEDDD 82 (496)
T ss_pred cceeEEEECCcccHHHHHHHHHHHHHHcCCceEEEEeechhcccCCc-ccceeeee-eecChHHhhhhhhhhccchHHHH
Confidence 46788888899999999999999999999999999998765544321 00000000 0000111111112222221111
Q ss_pred -cHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcC-CceEEEeCchHHHHHHHhchhhhhh
Q 012083 96 -DEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLE-LKKASIYTSAPGILAMIMNIPKFIE 173 (471)
Q Consensus 96 -~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lg-iP~v~~~~~~~~~~~~~~~~p~~~~ 173 (471)
........+...+...+++....+..... .++|++|+|.+..+...+|.... ||...+.+..+.........+..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~g~~~~~~-- 159 (496)
T KOG1192|consen 83 LDISESLLELNKTCEDLLRDPLEKLLLLKS-EKFDLIISDPFLGLFLLLAIPSFVIPLLSFPTSSAVLLALGLPSPLS-- 159 (496)
T ss_pred HHHHHHHHHHHHHHHHHHhchHHHHHHhhc-CCccEEEechhhHHHHHhcccceEEEeecccCchHHHHhcCCcCccc--
Confidence 11111334444455555554433332221 34999999998667777776665 89888888877765554332211
Q ss_pred hCCCCCCcccccccccccCCCCCCCCccccCCCCCCC----CCchhHHHHHHHH-------HHhhhccCcEEEEcchhhh
Q 012083 174 AGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGN----PSLQTLMFQYINV-------IRQNIEASDRILCTWFHEL 242 (471)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~-------~~~~~~~~~~~l~~s~~~l 242 (471)
+.+....+...+........+.+....++ ..... ............+ ......+.+..++|+.+.+
T Consensus 160 --~~p~~~~~~~~~~~~~~~~~~n~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ln~~~~~ 236 (496)
T KOG1192|consen 160 --YVPSPFSLSSGDDMSFPERVPNLIKKDLP-SFLFSLSDDRKQDKISKELLGDILNWKPTASGIIVNASFIFLNSNPLL 236 (496)
T ss_pred --ccCcccCccccccCcHHHHHHHHHHHHHH-HHHHHHhhhHHHHHHHHHhCCCcccccccHHHhhhcCeEEEEccCccc
Confidence 11110000000000000000000000000 00000 0000001111100 0122356668888998888
Q ss_pred chhhhhhCCCcceeccccCCCCCCCCCCcCcchhcccccCCCCC--cEEEEecCccc---cCCHHHHHHHHHHHHhC-CC
Q 012083 243 APSANKILPSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPG--SVIYAAFGSIS---KLSQQQFNELALGLELA-GQ 316 (471)
Q Consensus 243 ~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~--~vv~vs~GS~~---~~~~~~~~~~~~al~~~-~~ 316 (471)
+....+..+++++|||+...... .+. ..+.+|++..+.+ ++|||||||+. .++.+++..++.+++++ ++
T Consensus 237 ~~~~~~~~~~v~~IG~l~~~~~~---~~~--~~~~~wl~~~~~~~~~vvyvSfGS~~~~~~lp~~~~~~l~~~l~~~~~~ 311 (496)
T KOG1192|consen 237 DFEPRPLLPKVIPIGPLHVKDSK---QKS--PLPLEWLDILDESRHSVVYISFGSMVNSADLPEEQKKELAKALESLQGV 311 (496)
T ss_pred CCCCCCCCCCceEECcEEecCcc---ccc--cccHHHHHHHhhccCCeEEEECCcccccccCCHHHHHHHHHHHHhCCCc
Confidence 87546778999999999988431 111 1344777766554 79999999997 79999999999999999 88
Q ss_pred CEEEEEcCCCCCCCCCCCCchhHHhhCCCcEEEeccchhhh-hccCcceeeeeccCcchhhHhhhcCCceeecccccchh
Q 012083 317 PFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKV-LAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHL 395 (471)
Q Consensus 317 ~~i~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~~l-L~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~ 395 (471)
.|+|++... ....+++++.++.++||...+|+||.++ |.|+++++||||||+|||+|++++||||+++|+++||+
T Consensus 312 ~FiW~~~~~----~~~~~~~~~~~~~~~nV~~~~W~PQ~~lll~H~~v~~FvTHgG~nSt~E~~~~GvP~v~~Plf~DQ~ 387 (496)
T KOG1192|consen 312 TFLWKYRPD----DSIYFPEGLPNRGRGNVVLSKWAPQNDLLLDHPAVGGFVTHGGWNSTLESIYSGVPMVCVPLFGDQP 387 (496)
T ss_pred eEEEEecCC----cchhhhhcCCCCCcCceEEecCCCcHHHhcCCCcCcEEEECCcccHHHHHHhcCCceecCCccccch
Confidence 899999865 1111233332222568888899999998 69999999999999999999999999999999999999
Q ss_pred hhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Q 012083 396 YIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKELAQK 450 (471)
Q Consensus 396 ~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~ 450 (471)
.||+++++. |.|..+.. ..++...+.+++.+++++++|+++++++++.+++
T Consensus 388 ~Na~~i~~~-g~~~v~~~---~~~~~~~~~~~~~~il~~~~y~~~~~~l~~~~~~ 438 (496)
T KOG1192|consen 388 LNARLLVRH-GGGGVLDK---RDLVSEELLEAIKEILENEEYKEAAKRLSEILRD 438 (496)
T ss_pred hHHHHHHhC-CCEEEEeh---hhcCcHHHHHHHHHHHcChHHHHHHHHHHHHHHc
Confidence 999999994 77777765 5566656999999999999999999999999874
|
|
| >PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.3e-26 Score=219.94 Aligned_cols=320 Identities=16% Similarity=0.134 Sum_probs=203.1
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCCcccH
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDDRKDE 97 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 97 (471)
.||+|.+.++.||+.|.++||++|.++||+|+|+++..-.+.-. ....++.+..++..--.. ...
T Consensus 2 ~~i~~~~GGTGGHi~Pala~a~~l~~~g~~v~~vg~~~~~e~~l------------~~~~g~~~~~~~~~~l~~---~~~ 66 (352)
T PRK12446 2 KKIVFTGGGSAGHVTPNLAIIPYLKEDNWDISYIGSHQGIEKTI------------IEKENIPYYSISSGKLRR---YFD 66 (352)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEECCCcccccc------------CcccCCcEEEEeccCcCC---Cch
Confidence 68999999999999999999999999999999999776543211 112278887776321111 111
Q ss_pred HHHHHHHHhhccH--HHHHHHHHHhcccCCCCeeEEEECCCcc--hHHHHHHHcCCceEEEeCchHHHHHHHhchhhhhh
Q 012083 98 AKMTRSISKVMPG--YLEELIQKINQQEEDEKITCVIADVTFG--WALQVAAKLELKKASIYTSAPGILAMIMNIPKFIE 173 (471)
Q Consensus 98 ~~~~~~~~~~~~~--~~~~ll~~l~~~~~~~~pD~vV~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~ 173 (471)
.+.+......... ....++++ .+||+||+...+. .+..+|..+++|++......
T Consensus 67 ~~~~~~~~~~~~~~~~~~~i~~~-------~kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i~e~n~--------------- 124 (352)
T PRK12446 67 LKNIKDPFLVMKGVMDAYVRIRK-------LKPDVIFSKGGFVSVPVVIGGWLNRVPVLLHESDM--------------- 124 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-------cCCCEEEecCchhhHHHHHHHHHcCCCEEEECCCC---------------
Confidence 2222222211111 12233444 9999999987555 46789999999998843211
Q ss_pred hCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhchhhhhhC-CC
Q 012083 174 AGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSANKIL-PS 252 (471)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~-~~ 252 (471)
.+++. + +.+ .+.++.+++. +++-. .... .+
T Consensus 125 ------------------~~g~~-----------------n----r~~------~~~a~~v~~~-f~~~~---~~~~~~k 155 (352)
T PRK12446 125 ------------------TPGLA-----------------N----KIA------LRFASKIFVT-FEEAA---KHLPKEK 155 (352)
T ss_pred ------------------CccHH-----------------H----HHH------HHhhCEEEEE-ccchh---hhCCCCC
Confidence 11111 1 111 1244555443 22211 1112 47
Q ss_pred cceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccCCHHH-HHHHHHHHHhCCCCEEEEEcCCCCCCCC
Q 012083 253 IIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQ-FNELALGLELAGQPFLCGVRPGFINGSS 331 (471)
Q Consensus 253 ~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~-~~~~~~al~~~~~~~i~~~~~~~~~~~~ 331 (471)
+..+|+...+.-. ........+.+.-.+++++|+|..||++....+. +..++..+.. +.+++|.++.+
T Consensus 156 ~~~tG~Pvr~~~~----~~~~~~~~~~~~l~~~~~~iLv~GGS~Ga~~in~~~~~~l~~l~~-~~~vv~~~G~~------ 224 (352)
T PRK12446 156 VIYTGSPVREEVL----KGNREKGLAFLGFSRKKPVITIMGGSLGAKKINETVREALPELLL-KYQIVHLCGKG------ 224 (352)
T ss_pred eEEECCcCCcccc----cccchHHHHhcCCCCCCcEEEEECCccchHHHHHHHHHHHHhhcc-CcEEEEEeCCc------
Confidence 7889977655321 0111111122333345679999999987655433 3444444432 47888888754
Q ss_pred CCCCchhHHhhCCCcEEEecc-chh-hhhccCcceeeeeccCcchhhHhhhcCCceeecccc-----cchhhhHHHHHhh
Q 012083 332 TNNPDGLVAKVADFGKMVKWA-PQE-KVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWG-----HDHLYIKSCICDD 404 (471)
Q Consensus 332 ~~lp~~~~~~~~~nv~~~~~v-pq~-~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~-----~DQ~~na~~v~~~ 404 (471)
.+... .+. ..+..+.+|+ +.+ .+|+++++ +|||||.+|++|++++|+|+|++|+. .||..||..+++
T Consensus 225 -~~~~~-~~~-~~~~~~~~f~~~~m~~~~~~adl--vIsr~G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~- 298 (352)
T PRK12446 225 -NLDDS-LQN-KEGYRQFEYVHGELPDILAITDF--VISRAGSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESFER- 298 (352)
T ss_pred -hHHHH-Hhh-cCCcEEecchhhhHHHHHHhCCE--EEECCChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHHHH-
Confidence 01110 101 1344566787 543 78977776 99999999999999999999999984 489999999999
Q ss_pred hcceeeecCCCCCCcCHhHHHHHHHHHhCcH-HHHHHHHH
Q 012083 405 WKIGLWLEPDDNGIIGRHEIKRKVDELLSND-VVRKNALK 443 (471)
Q Consensus 405 ~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~-~~~~~a~~ 443 (471)
.|+|..+.. ..++++.|.+++.++++|+ .|++++++
T Consensus 299 ~g~~~~l~~---~~~~~~~l~~~l~~ll~~~~~~~~~~~~ 335 (352)
T PRK12446 299 QGYASVLYE---EDVTVNSLIKHVEELSHNNEKYKTALKK 335 (352)
T ss_pred CCCEEEcch---hcCCHHHHHHHHHHHHcCHHHHHHHHHH
Confidence 699999974 7789999999999999886 55544433
|
|
| >PF13528 Glyco_trans_1_3: Glycosyl transferase family 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.2e-25 Score=209.91 Aligned_cols=307 Identities=18% Similarity=0.197 Sum_probs=194.2
Q ss_pred cEEEEEcCC-CcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCC-CCCcc
Q 012083 18 VHVLLVSFP-AQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEP-EDDRK 95 (471)
Q Consensus 18 ~~Il~~~~~-~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~ 95 (471)
|||+|...+ +.||+.++++||++| |||+|+|++.....+.+.. .+....+++-... ....-
T Consensus 1 MkIl~~v~~~G~GH~~R~~~la~~L--rg~~v~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~ 63 (318)
T PF13528_consen 1 MKILFYVQGHGLGHASRCLALARAL--RGHEVTFITSGPAPEFLKP---------------RFPVREIPGLGPIQENGRL 63 (318)
T ss_pred CEEEEEeCCCCcCHHHHHHHHHHHH--ccCceEEEEcCCcHHHhcc---------------ccCEEEccCceEeccCCcc
Confidence 699998877 889999999999999 5999999999866544432 2334444322111 11111
Q ss_pred cHHHHHHHH---HhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEEEeCchHHHHHHHhchhhhh
Q 012083 96 DEAKMTRSI---SKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKASIYTSAPGILAMIMNIPKFI 172 (471)
Q Consensus 96 ~~~~~~~~~---~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~ 172 (471)
+........ .......++++++.++. .+||+||+|.. +.+..+|+..|||++.+........
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~pDlVIsD~~-~~~~~aa~~~giP~i~i~~~~~~~~---------- 128 (318)
T PF13528_consen 64 DRWKTVRNNIRWLARLARRIRREIRWLRE----FRPDLVISDFY-PLAALAARRAGIPVIVISNQYWFLH---------- 128 (318)
T ss_pred chHHHHHHHHHhhHHHHHHHHHHHHHHHh----cCCCEEEEcCh-HHHHHHHHhcCCCEEEEEehHHccc----------
Confidence 111111111 12233445555555555 89999999954 4567899999999999876543310
Q ss_pred hhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhchhhhhhCCC
Q 012083 173 EAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSANKILPS 252 (471)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~ 252 (471)
+... +. ........+.++..+. ....++..+..++. .. .....+
T Consensus 129 --------------------~~~~------~~----~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~-~~---~~~~~~ 172 (318)
T PF13528_consen 129 --------------------PNFW------LP----WDQDFGRLIERYIDRY--HFPPADRRLALSFY-PP---LPPFFR 172 (318)
T ss_pred --------------------ccCC------cc----hhhhHHHHHHHhhhhc--cCCcccceecCCcc-cc---cccccc
Confidence 0000 00 0000011111111111 13445555555443 11 222335
Q ss_pred cceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHHHHhCC-CCEEEEEcCCCCCCCC
Q 012083 253 IIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELAG-QPFLCGVRPGFINGSS 331 (471)
Q Consensus 253 ~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~-~~~i~~~~~~~~~~~~ 331 (471)
+.++||+..+.... . . ..+++.|+|++|..... .++++++..+ +.+++. +..
T Consensus 173 ~~~~~p~~~~~~~~---~----------~-~~~~~~iLv~~gg~~~~------~~~~~l~~~~~~~~~v~-g~~------ 225 (318)
T PF13528_consen 173 VPFVGPIIRPEIRE---L----------P-PEDEPKILVYFGGGGPG------DLIEALKALPDYQFIVF-GPN------ 225 (318)
T ss_pred ccccCchhcccccc---c----------C-CCCCCEEEEEeCCCcHH------HHHHHHHhCCCCeEEEE-cCC------
Confidence 67788887654310 0 0 12345899999874332 5667776666 566655 433
Q ss_pred CCCCchhHHhhCCCcEEEecc-c-hhhhhccCcceeeeeccCcchhhHhhhcCCceeeccc--ccchhhhHHHHHhhhcc
Q 012083 332 TNNPDGLVAKVADFGKMVKWA-P-QEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPW--GHDHLYIKSCICDDWKI 407 (471)
Q Consensus 332 ~~lp~~~~~~~~~nv~~~~~v-p-q~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~--~~DQ~~na~~v~~~~G~ 407 (471)
. .+...+|+.+.+|. + ..++|+.+++ +|||||+||++|++++|+|+|++|. ..||..||+++++ +|+
T Consensus 226 --~----~~~~~~ni~~~~~~~~~~~~~m~~ad~--vIs~~G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~-~G~ 296 (318)
T PF13528_consen 226 --A----ADPRPGNIHVRPFSTPDFAELMAAADL--VISKGGYTTISEALALGKPALVIPRPGQDEQEYNARKLEE-LGL 296 (318)
T ss_pred --c----ccccCCCEEEeecChHHHHHHHHhCCE--EEECCCHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHH-CCC
Confidence 0 11126889988887 3 4578955555 9999999999999999999999999 7899999999999 799
Q ss_pred eeeecCCCCCCcCHhHHHHHHHHH
Q 012083 408 GLWLEPDDNGIIGRHEIKRKVDEL 431 (471)
Q Consensus 408 G~~~~~~~~~~~~~~~l~~~i~~l 431 (471)
|..+.. .+++++.|.+.|+++
T Consensus 297 ~~~~~~---~~~~~~~l~~~l~~~ 317 (318)
T PF13528_consen 297 GIVLSQ---EDLTPERLAEFLERL 317 (318)
T ss_pred eEEccc---ccCCHHHHHHHHhcC
Confidence 999975 789999999998764
|
|
| >TIGR00661 MJ1255 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.2e-23 Score=197.26 Aligned_cols=307 Identities=15% Similarity=0.119 Sum_probs=174.1
Q ss_pred EEEEEcCCCc-ccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeE-EEeCCCC-CCCCCCcc
Q 012083 19 HVLLVSFPAQ-GHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVR-IVPLPDG-LEPEDDRK 95 (471)
Q Consensus 19 ~Il~~~~~~~-GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~-~~~~~~~~ 95 (471)
||+|...+.. ||+.|.++|+++|++ ||+|+|+++......+... ++. +..+|.. +......-
T Consensus 1 ril~~~~g~G~GH~~r~~ala~~L~~-g~ev~~~~~~~~~~~~~~~--------------~~~~~~~~p~~~~~~~~~~~ 65 (321)
T TIGR00661 1 KILYSVCGEGFGHTTRSVAIGEALKN-DYEVSYIASGRSKNYISKY--------------GFKVFETFPGIKLKGEDGKV 65 (321)
T ss_pred CEEEEEeccCccHHHHHHHHHHHHhC-CCeEEEEEcCCHHHhhhhh--------------cCcceeccCCceEeecCCcC
Confidence 5778666655 999999999999999 9999999988755444443 332 2222210 00000011
Q ss_pred cHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEEEeCchHHHHHHHhchhhhhhhC
Q 012083 96 DEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKASIYTSAPGILAMIMNIPKFIEAG 175 (471)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~ 175 (471)
+....+..........+.+..+.+++ .+||+||+| ..+.+..+|+.+|||++.+......
T Consensus 66 ~~~~~l~~~~~~~~~~~~~~~~~l~~----~~pDlVi~d-~~~~~~~aA~~~~iP~i~i~~q~~~--------------- 125 (321)
T TIGR00661 66 NIVKTLRNKEYSPKKAIRREINIIRE----YNPDLIISD-FEYSTVVAAKLLKIPVICISNQNYT--------------- 125 (321)
T ss_pred cHHHHHHhhccccHHHHHHHHHHHHh----cCCCEEEEC-CchHHHHHHHhcCCCEEEEecchhh---------------
Confidence 22222211001111234444444444 999999999 5456688999999999987652111
Q ss_pred CCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhh-hccCcEEEEcchhhhchhhhhhCCCcc
Q 012083 176 IISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQN-IEASDRILCTWFHELAPSANKILPSII 254 (471)
Q Consensus 176 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~s~~~l~~~~~~~~~~~~ 254 (471)
..|+.. +. . .....+.... ...++..++..++... ...|.+.
T Consensus 126 ---------------~~~~~~----~~-----------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~p~~~ 168 (321)
T TIGR00661 126 ---------------RYPLKT----DL-----------I---VYPTMAALRIFNERCERFIVPDYPFPY----TICPKII 168 (321)
T ss_pred ---------------cCCccc----ch-----------h---HHHHHHHHHHhccccceEeeecCCCCC----CCCcccc
Confidence 001100 00 0 0000011111 1233444333322111 0111110
Q ss_pred --eeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHHHHhCCC-CEEEEEcCCCCCCCC
Q 012083 255 --PVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELAGQ-PFLCGVRPGFINGSS 331 (471)
Q Consensus 255 --~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~-~~i~~~~~~~~~~~~ 331 (471)
.-+|... .+..++... +++.|++.+|+... ..+++++.+.+. .++ +...
T Consensus 169 ~~~~~~~~~------------~~~~~~~~~--~~~~iLv~~g~~~~------~~l~~~l~~~~~~~~i--~~~~------ 220 (321)
T TIGR00661 169 KNMEGPLIR------------YDVDDVDNY--GEDYILVYIGFEYR------YKILELLGKIANVKFV--CYSY------ 220 (321)
T ss_pred ccCCCcccc------------hhhhccccC--CCCcEEEECCcCCH------HHHHHHHHhCCCeEEE--EeCC------
Confidence 0011110 111122222 24578888887322 345667766653 343 2221
Q ss_pred CCCCchhHHhhCCCcEEEeccc--hhhhhccCcceeeeeccCcchhhHhhhcCCceeeccccc--chhhhHHHHHhhhcc
Q 012083 332 TNNPDGLVAKVADFGKMVKWAP--QEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGH--DHLYIKSCICDDWKI 407 (471)
Q Consensus 332 ~~lp~~~~~~~~~nv~~~~~vp--q~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~--DQ~~na~~v~~~~G~ 407 (471)
....+ ..++|+.+.+|.| ....| +.++++|||||.+|++|++++|+|++++|... ||..||+.+++ .|+
T Consensus 221 ~~~~~----~~~~~v~~~~~~~~~~~~~l--~~ad~vI~~~G~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~-~g~ 293 (321)
T TIGR00661 221 EVAKN----SYNENVEIRRITTDNFKELI--KNAELVITHGGFSLISEALSLGKPLIVIPDLGQFEQGNNAVKLED-LGC 293 (321)
T ss_pred CCCcc----ccCCCEEEEECChHHHHHHH--HhCCEEEECCChHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHH-CCC
Confidence 01111 2357888999998 33667 55555999999999999999999999999854 89999999999 699
Q ss_pred eeeecCCCCCCcCHhHHHHHHHHHhCcHHHH
Q 012083 408 GLWLEPDDNGIIGRHEIKRKVDELLSNDVVR 438 (471)
Q Consensus 408 G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~ 438 (471)
|+.+.. ..+ ++.+++.++++|+.|+
T Consensus 294 ~~~l~~---~~~---~~~~~~~~~~~~~~~~ 318 (321)
T TIGR00661 294 GIALEY---KEL---RLLEAILDIRNMKRYK 318 (321)
T ss_pred EEEcCh---hhH---HHHHHHHhcccccccc
Confidence 999975 333 7777888888887664
|
This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases. |
| >COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1e-21 Score=187.16 Aligned_cols=326 Identities=15% Similarity=0.102 Sum_probs=204.4
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCC-eEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCCc-c
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRI-KVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDDR-K 95 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh-~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~ 95 (471)
++|++...++.||+.|.++|+++|.++|+ +|.++.+....+... ....++.++.++.+-...... .
T Consensus 1 ~~ivl~~gGTGGHv~pAlAl~~~l~~~g~~~v~~~~~~~~~e~~l------------~~~~~~~~~~I~~~~~~~~~~~~ 68 (357)
T COG0707 1 KKIVLTAGGTGGHVFPALALAEELAKRGWEQVIVLGTGDGLEAFL------------VKQYGIEFELIPSGGLRRKGSLK 68 (357)
T ss_pred CeEEEEeCCCccchhHHHHHHHHHHhhCccEEEEecccccceeee------------ccccCceEEEEecccccccCcHH
Confidence 48899999999999999999999999999 588887766555443 223388888887554443221 1
Q ss_pred cHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcc--hHHHHHHHcCCceEEEeCchHHHHHHHhchhhhhh
Q 012083 96 DEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFG--WALQVAAKLELKKASIYTSAPGILAMIMNIPKFIE 173 (471)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~ 173 (471)
.....+..+. .....++++++ .+||+|+.-..+. .+..+|..+|||++..-.
T Consensus 69 ~~~~~~~~~~--~~~~a~~il~~-------~kPd~vig~Ggyvs~P~~~Aa~~~~iPv~ihEq----------------- 122 (357)
T COG0707 69 LLKAPFKLLK--GVLQARKILKK-------LKPDVVIGTGGYVSGPVGIAAKLLGIPVIIHEQ----------------- 122 (357)
T ss_pred HHHHHHHHHH--HHHHHHHHHHH-------cCCCEEEecCCccccHHHHHHHhCCCCEEEEec-----------------
Confidence 2222222221 22335566666 9999999966554 667899999999999422
Q ss_pred hCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhchhhhhhCCCc
Q 012083 174 AGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSANKILPSI 253 (471)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~ 253 (471)
+ ..+|.. + +++. +.++.+.+.. +..+- .....++
T Consensus 123 -n---------------~~~G~a-----------------n----k~~~------~~a~~V~~~f-~~~~~--~~~~~~~ 156 (357)
T COG0707 123 -N---------------AVPGLA-----------------N----KILS------KFAKKVASAF-PKLEA--GVKPENV 156 (357)
T ss_pred -C---------------CCcchh-----------------H----HHhH------Hhhceeeecc-ccccc--cCCCCce
Confidence 1 112211 0 1111 1333333332 21110 1112257
Q ss_pred ceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccCCHHH-HHHHHHHHHhCCCCEEEEEcCCCCCCCCC
Q 012083 254 IPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQ-FNELALGLELAGQPFLCGVRPGFINGSST 332 (471)
Q Consensus 254 ~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~-~~~~~~al~~~~~~~i~~~~~~~~~~~~~ 332 (471)
..+|--....-. . .+.. . .+ .+...++++|+|..||++...-+. +..+...+.+ ...+++.++..
T Consensus 157 ~~tG~Pvr~~~~--~-~~~~-~-~~-~~~~~~~~~ilV~GGS~Ga~~ln~~v~~~~~~l~~-~~~v~~~~G~~------- 222 (357)
T COG0707 157 VVTGIPVRPEFE--E-LPAA-E-VR-KDGRLDKKTILVTGGSQGAKALNDLVPEALAKLAN-RIQVIHQTGKN------- 222 (357)
T ss_pred EEecCcccHHhh--c-cchh-h-hh-hhccCCCcEEEEECCcchhHHHHHHHHHHHHHhhh-CeEEEEEcCcc-------
Confidence 777743332210 0 0110 0 01 111225679999999975543222 2233333333 46777777654
Q ss_pred CCCchhHHhh-CCC-cEEEeccchh-hhhccCcceeeeeccCcchhhHhhhcCCceeecccc----cchhhhHHHHHhhh
Q 012083 333 NNPDGLVAKV-ADF-GKMVKWAPQE-KVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWG----HDHLYIKSCICDDW 405 (471)
Q Consensus 333 ~lp~~~~~~~-~~n-v~~~~~vpq~-~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~----~DQ~~na~~v~~~~ 405 (471)
.+ +...... ..+ +.+.+|..++ .+++-+++ +||++|.+|+.|++++|+|++.+|+- .||..||..+++ .
T Consensus 223 ~~-~~~~~~~~~~~~~~v~~f~~dm~~~~~~ADL--vIsRaGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~~-~ 298 (357)
T COG0707 223 DL-EELKSAYNELGVVRVLPFIDDMAALLAAADL--VISRAGALTIAELLALGVPAILVPYPPGADGHQEYNAKFLEK-A 298 (357)
T ss_pred hH-HHHHHHHhhcCcEEEeeHHhhHHHHHHhccE--EEeCCcccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHHHh-C
Confidence 11 1111111 223 6677999876 68866666 99999999999999999999999982 489999999999 5
Q ss_pred cceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHH
Q 012083 406 KIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKELAQKS 451 (471)
Q Consensus 406 G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~~ 451 (471)
|.|..+.- ..+|.+.+.+.|.++++++ ++.++|++..++.
T Consensus 299 gaa~~i~~---~~lt~~~l~~~i~~l~~~~---~~l~~m~~~a~~~ 338 (357)
T COG0707 299 GAALVIRQ---SELTPEKLAELILRLLSNP---EKLKAMAENAKKL 338 (357)
T ss_pred CCEEEecc---ccCCHHHHHHHHHHHhcCH---HHHHHHHHHHHhc
Confidence 99999984 7799999999999999984 4555555555543
|
|
| >PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.2e-20 Score=180.52 Aligned_cols=337 Identities=14% Similarity=0.112 Sum_probs=201.0
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcch--hhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCCcc
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFIC--ERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDDRK 95 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 95 (471)
|||+|+..+..||...++.|+++|.++||+|++++.+... +..++ .+++++.++..-... .
T Consensus 2 ~~i~i~~~g~gG~~~~~~~la~~L~~~g~ev~vv~~~~~~~~~~~~~--------------~g~~~~~~~~~~~~~---~ 64 (357)
T PRK00726 2 KKILLAGGGTGGHVFPALALAEELKKRGWEVLYLGTARGMEARLVPK--------------AGIEFHFIPSGGLRR---K 64 (357)
T ss_pred cEEEEEcCcchHhhhHHHHHHHHHHhCCCEEEEEECCCchhhhcccc--------------CCCcEEEEeccCcCC---C
Confidence 8999999999999999999999999999999999886521 11111 266666664321111 1
Q ss_pred cHHHHHHHHHh--hccHHHHHHHHHHhcccCCCCeeEEEECCCc--chHHHHHHHcCCceEEEeCchHHHHHHHhchhhh
Q 012083 96 DEAKMTRSISK--VMPGYLEELIQKINQQEEDEKITCVIADVTF--GWALQVAAKLELKKASIYTSAPGILAMIMNIPKF 171 (471)
Q Consensus 96 ~~~~~~~~~~~--~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~--~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~ 171 (471)
.....+..... .....+.+++++ .+||+|++.... ..+..++...++|++......
T Consensus 65 ~~~~~l~~~~~~~~~~~~~~~~ik~-------~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~------------- 124 (357)
T PRK00726 65 GSLANLKAPFKLLKGVLQARKILKR-------FKPDVVVGFGGYVSGPGGLAARLLGIPLVIHEQNA------------- 124 (357)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHh-------cCCCEEEECCCcchhHHHHHHHHcCCCEEEEcCCC-------------
Confidence 11111111111 111123344444 899999999632 245567788899998632100
Q ss_pred hhhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhchhhhhhCC
Q 012083 172 IEAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSANKILP 251 (471)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~ 251 (471)
.++ ...++. ...+|.+++.+...+. .....
T Consensus 125 --------------------~~~---------------------~~~r~~------~~~~d~ii~~~~~~~~---~~~~~ 154 (357)
T PRK00726 125 --------------------VPG---------------------LANKLL------ARFAKKVATAFPGAFP---EFFKP 154 (357)
T ss_pred --------------------Ccc---------------------HHHHHH------HHHhchheECchhhhh---ccCCC
Confidence 000 001111 1234555544433221 12235
Q ss_pred CcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccCCHHHHH-HHHHHHHhCCC--CEEEEEcCCCCC
Q 012083 252 SIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFN-ELALGLELAGQ--PFLCGVRPGFIN 328 (471)
Q Consensus 252 ~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~-~~~~al~~~~~--~~i~~~~~~~~~ 328 (471)
++.++|........ . +.... .-+...++.++|++..|+. ....+. .+.+++.++.. .+++.++..
T Consensus 155 ~i~vi~n~v~~~~~--~--~~~~~--~~~~~~~~~~~i~~~gg~~---~~~~~~~~l~~a~~~~~~~~~~~~~~G~g--- 222 (357)
T PRK00726 155 KAVVTGNPVREEIL--A--LAAPP--ARLAGREGKPTLLVVGGSQ---GARVLNEAVPEALALLPEALQVIHQTGKG--- 222 (357)
T ss_pred CEEEECCCCChHhh--c--ccchh--hhccCCCCCeEEEEECCcH---hHHHHHHHHHHHHHHhhhCcEEEEEcCCC---
Confidence 77777755443211 0 00000 1112222345777766653 222232 33366655443 344555543
Q ss_pred CCCCCCCchhHHh--hCCCcEEEeccc-hhhhhccCcceeeeeccCcchhhHhhhcCCceeeccc----ccchhhhHHHH
Q 012083 329 GSSTNNPDGLVAK--VADFGKMVKWAP-QEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPW----GHDHLYIKSCI 401 (471)
Q Consensus 329 ~~~~~lp~~~~~~--~~~nv~~~~~vp-q~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~----~~DQ~~na~~v 401 (471)
.. +.+.+. ..-++.+.+|+. ..++++.+++ +|+|+|.++++||+++|+|+|++|. ..||..|+..+
T Consensus 223 -~~----~~~~~~~~~~~~v~~~g~~~~~~~~~~~~d~--~i~~~g~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i 295 (357)
T PRK00726 223 -DL----EEVRAAYAAGINAEVVPFIDDMAAAYAAADL--VICRAGASTVAELAAAGLPAILVPLPHAADDHQTANARAL 295 (357)
T ss_pred -cH----HHHHHHhhcCCcEEEeehHhhHHHHHHhCCE--EEECCCHHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHH
Confidence 11 122111 222377789984 4589966666 9999999999999999999999997 46899999999
Q ss_pred HhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHH
Q 012083 402 CDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKELAQKSVTKEGSSSKNLEYFIKQ 468 (471)
Q Consensus 402 ~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~ 468 (471)
.+ .|.|..+.. ..++.++|.++|.++++|+++++++.+-+++..+ ..+.....+.+.+.
T Consensus 296 ~~-~~~g~~~~~---~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 354 (357)
T PRK00726 296 VD-AGAALLIPQ---SDLTPEKLAEKLLELLSDPERLEAMAEAARALGK----PDAAERLADLIEEL 354 (357)
T ss_pred HH-CCCEEEEEc---ccCCHHHHHHHHHHHHcCHHHHHHHHHHHHhcCC----cCHHHHHHHHHHHH
Confidence 99 699999975 5578999999999999999888777776665533 34444444444443
|
|
| >cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.7e-18 Score=167.31 Aligned_cols=323 Identities=14% Similarity=0.074 Sum_probs=192.1
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCCcccHH
Q 012083 19 HVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDDRKDEA 98 (471)
Q Consensus 19 ~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 98 (471)
+|+|...++.||...+..|++.|.++||+|++++....... . . ....++++..++..-... ....
T Consensus 1 ~~~~~~~~~gG~~~~~~~la~~l~~~G~ev~v~~~~~~~~~-~-~----------~~~~~~~~~~~~~~~~~~---~~~~ 65 (350)
T cd03785 1 RILIAGGGTGGHIFPALALAEELRERGAEVLFLGTKRGLEA-R-L----------VPKAGIPLHTIPVGGLRR---KGSL 65 (350)
T ss_pred CEEEEecCchhhhhHHHHHHHHHHhCCCEEEEEECCCcchh-h-c----------ccccCCceEEEEecCcCC---CChH
Confidence 58899999999999999999999999999999987543211 1 0 111256666654321111 1112
Q ss_pred HHHHHHHh--hccHHHHHHHHHHhcccCCCCeeEEEECCC--cchHHHHHHHcCCceEEEeCchHHHHHHHhchhhhhhh
Q 012083 99 KMTRSISK--VMPGYLEELIQKINQQEEDEKITCVIADVT--FGWALQVAAKLELKKASIYTSAPGILAMIMNIPKFIEA 174 (471)
Q Consensus 99 ~~~~~~~~--~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~--~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~ 174 (471)
+.+..+.. .....+.+++++ .+||+|++... ...+..+|...++|++.....
T Consensus 66 ~~~~~~~~~~~~~~~~~~~i~~-------~~pDvI~~~~~~~~~~~~~~a~~~~~p~v~~~~~----------------- 121 (350)
T cd03785 66 KKLKAPFKLLKGVLQARKILKK-------FKPDVVVGFGGYVSGPVGLAAKLLGIPLVIHEQN----------------- 121 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-------cCCCEEEECCCCcchHHHHHHHHhCCCEEEEcCC-----------------
Confidence 22222111 111223444444 89999998753 335567788899999863110
Q ss_pred CCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhchhhhhhCCCcc
Q 012083 175 GIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSANKILPSII 254 (471)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~ 254 (471)
..++ ...++. ...++.+++.+....+. -...++.
T Consensus 122 ----------------~~~~---------------------~~~~~~------~~~~~~vi~~s~~~~~~---~~~~~~~ 155 (350)
T cd03785 122 ----------------AVPG---------------------LANRLL------ARFADRVALSFPETAKY---FPKDKAV 155 (350)
T ss_pred ----------------CCcc---------------------HHHHHH------HHhhCEEEEcchhhhhc---CCCCcEE
Confidence 0000 000111 12467777776554442 1134677
Q ss_pred eeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccCCH-HHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCC
Q 012083 255 PVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQ-QQFNELALGLELAGQPFLCGVRPGFINGSSTN 333 (471)
Q Consensus 255 ~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~-~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~ 333 (471)
.+|........ . +.+. ...+...+++++|++..|+...... +.+..++..+.+.+..+++.++.. .
T Consensus 156 ~i~n~v~~~~~--~--~~~~--~~~~~~~~~~~~i~~~~g~~~~~~~~~~l~~a~~~l~~~~~~~~~i~G~g----~--- 222 (350)
T cd03785 156 VTGNPVREEIL--A--LDRE--RARLGLRPGKPTLLVFGGSQGARAINEAVPEALAELLRKRLQVIHQTGKG----D--- 222 (350)
T ss_pred EECCCCchHHh--h--hhhh--HHhcCCCCCCeEEEEECCcHhHHHHHHHHHHHHHHhhccCeEEEEEcCCc----c---
Confidence 77754432210 0 0000 1223333345567776676432211 122233333433334455555543 1
Q ss_pred CCchhHHhh---CCCcEEEecc-chhhhhccCcceeeeeccCcchhhHhhhcCCceeeccc----ccchhhhHHHHHhhh
Q 012083 334 NPDGLVAKV---ADFGKMVKWA-PQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPW----GHDHLYIKSCICDDW 405 (471)
Q Consensus 334 lp~~~~~~~---~~nv~~~~~v-pq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~----~~DQ~~na~~v~~~~ 405 (471)
.+.+.+.. .+|+.+.+|+ ....+|+.+++ +|+++|.+|+.||+.+|+|+++.|. ..+|..|+..+.+ .
T Consensus 223 -~~~l~~~~~~~~~~v~~~g~~~~~~~~l~~ad~--~v~~sg~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~~l~~-~ 298 (350)
T cd03785 223 -LEEVKKAYEELGVNYEVFPFIDDMAAAYAAADL--VISRAGASTVAELAALGLPAILIPLPYAADDHQTANARALVK-A 298 (350)
T ss_pred -HHHHHHHHhccCCCeEEeehhhhHHHHHHhcCE--EEECCCHhHHHHHHHhCCCEEEeecCCCCCCcHHHhHHHHHh-C
Confidence 12222222 4688999998 34578866666 9999999999999999999999986 4678999999999 6
Q ss_pred cceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHH
Q 012083 406 KIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKE 446 (471)
Q Consensus 406 G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~ 446 (471)
|.|..+.. ...+.+++.++|+++++|++.++++.+-+.
T Consensus 299 g~g~~v~~---~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~ 336 (350)
T cd03785 299 GAAVLIPQ---EELTPERLAAALLELLSDPERLKAMAEAAR 336 (350)
T ss_pred CCEEEEec---CCCCHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 99999974 446899999999999998866555444433
|
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.78 E-value=7.9e-17 Score=156.89 Aligned_cols=318 Identities=14% Similarity=0.107 Sum_probs=178.4
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCCcccH
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDDRKDE 97 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 97 (471)
|||+|+..+..||+.....|+++|.++||+|++++.+.... ... ....+++++.++..-... ...
T Consensus 1 ~~i~~~~g~~~g~~~~~~~La~~L~~~g~eV~vv~~~~~~~--~~~----------~~~~g~~~~~i~~~~~~~---~~~ 65 (348)
T TIGR01133 1 KKVVLAAGGTGGHIFPALAVAEELIKRGVEVLWLGTKRGLE--KRL----------VPKAGIEFYFIPVGGLRR---KGS 65 (348)
T ss_pred CeEEEEeCccHHHHhHHHHHHHHHHhCCCEEEEEeCCCcch--hcc----------cccCCCceEEEeccCcCC---CCh
Confidence 49999999999999988899999999999999998743211 000 011267776664321111 122
Q ss_pred HHHHHHHHhh--ccHHHHHHHHHHhcccCCCCeeEEEECCCcc--hHHHHHHHcCCceEEEeCchHHHHHHHhchhhhhh
Q 012083 98 AKMTRSISKV--MPGYLEELIQKINQQEEDEKITCVIADVTFG--WALQVAAKLELKKASIYTSAPGILAMIMNIPKFIE 173 (471)
Q Consensus 98 ~~~~~~~~~~--~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~ 173 (471)
.+.+...... ....+.+++++ .+||+|++..... .+..++...++|++.....
T Consensus 66 ~~~l~~~~~~~~~~~~l~~~i~~-------~~pDvVi~~~~~~~~~~~~~~~~~~~p~v~~~~~---------------- 122 (348)
T TIGR01133 66 FRLIKTPLKLLKAVFQARRILKK-------FKPDAVIGFGGYVSGPAGLAAKLLGIPLFHHEQN---------------- 122 (348)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-------cCCCEEEEcCCcccHHHHHHHHHcCCCEEEECCC----------------
Confidence 2222211110 11123444454 8999999975433 3455788889998742100
Q ss_pred hCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhchhhhhhCCCc
Q 012083 174 AGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSANKILPSI 253 (471)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~ 253 (471)
..+ ....+++ .+.++.+++.+...-+.. ..
T Consensus 123 -----------------~~~---------------------~~~~~~~------~~~~d~ii~~~~~~~~~~------~~ 152 (348)
T TIGR01133 123 -----------------AVP---------------------GLTNKLL------SRFAKKVLISFPGAKDHF------EA 152 (348)
T ss_pred -----------------CCc---------------------cHHHHHH------HHHhCeeEECchhHhhcC------Cc
Confidence 000 0001111 135666666654332221 22
Q ss_pred ceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHHHH---hCCCCEEEEEcCCCCCCC
Q 012083 254 IPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLE---LAGQPFLCGVRPGFINGS 330 (471)
Q Consensus 254 ~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~---~~~~~~i~~~~~~~~~~~ 330 (471)
..||........ .. +.. ...+...++.++|.+..|+... ......+.++++ ..+.++++..++. .
T Consensus 153 ~~i~n~v~~~~~--~~-~~~---~~~~~~~~~~~~i~~~gg~~~~--~~~~~~l~~a~~~l~~~~~~~~~~~g~~----~ 220 (348)
T TIGR01133 153 VLVGNPVRQEIR--SL-PVP---RERFGLREGKPTILVLGGSQGA--KILNELVPKALAKLAEKGIQIVHQTGKN----D 220 (348)
T ss_pred eEEcCCcCHHHh--cc-cch---hhhcCCCCCCeEEEEECCchhH--HHHHHHHHHHHHHHhhcCcEEEEECCcc----h
Confidence 455533321110 00 000 0122222334455554455332 221222334443 3345565544432 1
Q ss_pred CCCCCchhHHhhCC-C-cEEEecc--chhhhhccCcceeeeeccCcchhhHhhhcCCceeecccc---cchhhhHHHHHh
Q 012083 331 STNNPDGLVAKVAD-F-GKMVKWA--PQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWG---HDHLYIKSCICD 403 (471)
Q Consensus 331 ~~~lp~~~~~~~~~-n-v~~~~~v--pq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~---~DQ~~na~~v~~ 403 (471)
. +.+.+...+ + ...+.|. ....+|+.+++ +|+++|.+++.||+++|+|+|+.|.. .+|..|+..+.+
T Consensus 221 ---~-~~l~~~~~~~~l~~~v~~~~~~~~~~l~~ad~--~v~~~g~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~ 294 (348)
T TIGR01133 221 ---L-EKVKNVYQELGIEAIVTFIDENMAAAYAAADL--VISRAGASTVAELAAAGVPAILIPYPYAADDQYYNAKFLED 294 (348)
T ss_pred ---H-HHHHHHHhhCCceEEecCcccCHHHHHHhCCE--EEECCChhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHH
Confidence 1 222221211 1 1233344 34578866666 99999988999999999999999873 468889999998
Q ss_pred hhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHH
Q 012083 404 DWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLK 445 (471)
Q Consensus 404 ~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~ 445 (471)
.|.|..+.. ...+.++|.++++++++|++++++..+-+
T Consensus 295 -~~~G~~~~~---~~~~~~~l~~~i~~ll~~~~~~~~~~~~~ 332 (348)
T TIGR01133 295 -LGAGLVIRQ---KELLPEKLLEALLKLLLDPANLEAMAEAA 332 (348)
T ss_pred -CCCEEEEec---ccCCHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence 699998864 55679999999999999987665544433
|
RL J Bacteriol 1993 Mar;175(6):1841-3 |
| >COG4671 Predicted glycosyl transferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.1e-16 Score=142.38 Aligned_cols=328 Identities=15% Similarity=0.127 Sum_probs=200.5
Q ss_pred CcEEEEEcCC--CcccHHHHHHHHHHHHhC--CCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCC
Q 012083 17 NVHVLLVSFP--AQGHVASLMKLAHRLADC--RIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPED 92 (471)
Q Consensus 17 ~~~Il~~~~~--~~GH~~p~~~La~~L~~r--Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 92 (471)
.+||+|.+.- +-||+..+..+|++|++. |.+|++++......-+. ...|++|+.+|.......
T Consensus 9 ~~Ri~~Yshd~~GlGHlrR~~~Ia~aLv~d~~~~~Il~IsG~~~~~~F~-------------~~~gVd~V~LPsl~k~~~ 75 (400)
T COG4671 9 RPRILFYSHDLLGLGHLRRALRIAHALVEDYLGFDILIISGGPPAGGFP-------------GPAGVDFVKLPSLIKGDN 75 (400)
T ss_pred cceEEEEehhhccchHHHHHHHHHHHHhhcccCceEEEEeCCCccCCCC-------------CcccCceEecCceEecCC
Confidence 3699999977 558999999999999997 99999999977655442 334999999996543331
Q ss_pred -------CcccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEEEeCchHHHHHHH
Q 012083 93 -------DRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKASIYTSAPGILAMI 165 (471)
Q Consensus 93 -------~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~ 165 (471)
...+. +.+.+.-...+...++. .+||++|+|.+-.+. -.++ .| +..+
T Consensus 76 G~~~~~d~~~~l----~e~~~~Rs~lil~t~~~-------fkPDi~IVd~~P~Gl---r~EL-~p-----------tL~y 129 (400)
T COG4671 76 GEYGLVDLDGDL----EETKKLRSQLILSTAET-------FKPDIFIVDKFPFGL---RFEL-LP-----------TLEY 129 (400)
T ss_pred CceeeeecCCCH----HHHHHHHHHHHHHHHHh-------cCCCEEEEeccccch---hhhh-hH-----------HHHH
Confidence 11122 22221122223333344 999999999775531 1110 00 0001
Q ss_pred hchhhhhhhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhchh
Q 012083 166 MNIPKFIEAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPS 245 (471)
Q Consensus 166 ~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~ 245 (471)
.. ..+ + ..+-++. ...|.+ ......-.++.....+ -+..|.+++-.+|+|..+
T Consensus 130 l~-----~~~--t-----------~~vL~lr--~i~D~p-~~~~~~w~~~~~~~~I------~r~yD~V~v~GdP~f~d~ 182 (400)
T COG4671 130 LK-----TTG--T-----------RLVLGLR--SIRDIP-QELEADWRRAETVRLI------NRFYDLVLVYGDPDFYDP 182 (400)
T ss_pred Hh-----hcC--C-----------cceeehH--hhhhch-hhhccchhhhHHHHHH------HHhheEEEEecCccccCh
Confidence 10 000 0 0000000 001111 0000000011111111 146788888888877544
Q ss_pred hhhh------CCCcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHHHHh-CCCC-
Q 012083 246 ANKI------LPSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLEL-AGQP- 317 (471)
Q Consensus 246 ~~~~------~~~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~-~~~~- 317 (471)
...+ -.++.|+|.+-.+-+ ....|.. .. +++.-|+||-|- +....+.+...+.|-.. .+.+
T Consensus 183 ~~~~~~~~~i~~k~~ytG~vq~~~~--~~~~p~~-------~~-pE~~~Ilvs~GG-G~dG~eLi~~~l~A~~~l~~l~~ 251 (400)
T COG4671 183 LTEFPFAPAIRAKMRYTGFVQRSLP--HLPLPPH-------EA-PEGFDILVSVGG-GADGAELIETALAAAQLLAGLNH 251 (400)
T ss_pred hhcCCccHhhhhheeEeEEeeccCc--CCCCCCc-------CC-CccceEEEecCC-ChhhHHHHHHHHHHhhhCCCCCc
Confidence 2322 238899998822111 1111111 11 344588888886 44456666666665433 3333
Q ss_pred -EEEEEcCCCCCCCCCCCCchhHH----hhC--CCcEEEeccchh-hhhccCcceeeeeccCcchhhHhhhcCCceeecc
Q 012083 318 -FLCGVRPGFINGSSTNNPDGLVA----KVA--DFGKMVKWAPQE-KVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWP 389 (471)
Q Consensus 318 -~i~~~~~~~~~~~~~~lp~~~~~----~~~--~nv~~~~~vpq~-~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P 389 (471)
.++.+++ .+|..-.+ ..+ +++.+..|--+. .+++.++. +|+-||+||++|-|++|+|.+++|
T Consensus 252 ~~~ivtGP--------~MP~~~r~~l~~~A~~~p~i~I~~f~~~~~~ll~gA~~--vVSm~GYNTvCeILs~~k~aLivP 321 (400)
T COG4671 252 KWLIVTGP--------FMPEAQRQKLLASAPKRPHISIFEFRNDFESLLAGARL--VVSMGGYNTVCEILSFGKPALIVP 321 (400)
T ss_pred ceEEEeCC--------CCCHHHHHHHHHhcccCCCeEEEEhhhhHHHHHHhhhe--eeecccchhhhHHHhCCCceEEec
Confidence 5555654 35543332 334 778888998765 68855555 999999999999999999999999
Q ss_pred cc---cchhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcH
Q 012083 390 WG---HDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSND 435 (471)
Q Consensus 390 ~~---~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~ 435 (471)
.. -||...|+|+++ ||+--.+.+ +.++++.+.+++...++-|
T Consensus 322 r~~p~eEQliRA~Rl~~-LGL~dvL~p---e~lt~~~La~al~~~l~~P 366 (400)
T COG4671 322 RAAPREEQLIRAQRLEE-LGLVDVLLP---ENLTPQNLADALKAALARP 366 (400)
T ss_pred cCCCcHHHHHHHHHHHh-cCcceeeCc---ccCChHHHHHHHHhcccCC
Confidence 85 499999999999 999999987 7899999999999999843
|
|
| >TIGR00215 lpxB lipid-A-disaccharide synthase | Back alignment and domain information |
|---|
Probab=99.77 E-value=5.2e-17 Score=159.10 Aligned_cols=350 Identities=13% Similarity=0.020 Sum_probs=200.4
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCCcccH
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDDRKDE 97 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 97 (471)
.||+|...++.||+.|. +|+++|.++|++|+|++.... ..++.+.+ .++.+..++. ..+
T Consensus 6 ~ki~i~aGgtsGhi~pa-al~~~l~~~~~~~~~~g~gg~--~m~~~g~~----------~~~~~~~l~v--------~G~ 64 (385)
T TIGR00215 6 PTIALVAGEASGDILGA-GLRQQLKEHYPNARFIGVAGP--RMAAEGCE----------VLYSMEELSV--------MGL 64 (385)
T ss_pred CeEEEEeCCccHHHHHH-HHHHHHHhcCCCcEEEEEccH--HHHhCcCc----------cccChHHhhh--------ccH
Confidence 68999999999999999 999999999999999987532 34444211 0233333321 111
Q ss_pred HHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCC-cch--HHHHHHHcCCceEEEeC-chHHHHHHHhchhhhhh
Q 012083 98 AKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVT-FGW--ALQVAAKLELKKASIYT-SAPGILAMIMNIPKFIE 173 (471)
Q Consensus 98 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~-~~~--~~~~A~~lgiP~v~~~~-~~~~~~~~~~~~p~~~~ 173 (471)
.+.+..+. .....+.+..+.+++ .+||+||.-.. ... ....|+.+|||++...+ ..+
T Consensus 65 ~~~l~~~~-~~~~~~~~~~~~l~~----~kPd~vi~~g~~~~~~~~a~aa~~~gip~v~~i~P~~w-------------- 125 (385)
T TIGR00215 65 REVLGRLG-RLLKIRKEVVQLAKQ----AKPDLLVGIDAPDFNLTKELKKKDPGIKIIYYISPQVW-------------- 125 (385)
T ss_pred HHHHHHHH-HHHHHHHHHHHHHHh----cCCCEEEEeCCCCccHHHHHHHhhCCCCEEEEeCCcHh--------------
Confidence 11122111 111122233333333 89999997443 222 22378899999987531 111
Q ss_pred hCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhchhhhhhCCCc
Q 012083 174 AGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSANKILPSI 253 (471)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~ 253 (471)
.|. ....+.+. +.+|.+++.+..+-+.. ....-+.
T Consensus 126 --------------------------------aw~--~~~~r~l~----------~~~d~v~~~~~~e~~~~-~~~g~~~ 160 (385)
T TIGR00215 126 --------------------------------AWR--KWRAKKIE----------KATDFLLAILPFEKAFY-QKKNVPC 160 (385)
T ss_pred --------------------------------hcC--cchHHHHH----------HHHhHhhccCCCcHHHH-HhcCCCE
Confidence 110 00011111 24555555554443332 1222356
Q ss_pred ceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHHHHhC-----CCCEEEEEcCCCCC
Q 012083 254 IPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELA-----GQPFLCGVRPGFIN 328 (471)
Q Consensus 254 ~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~ 328 (471)
.+||.-..+... ...+...+..+-+.-.+++++|.+-.||....-...+..+++++..+ +.++++.......
T Consensus 161 ~~vGnPv~~~~~--~~~~~~~~~r~~lgl~~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~~vi~~~~~~~- 237 (385)
T TIGR00215 161 RFVGHPLLDAIP--LYKPDRKSAREKLGIDHNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLRRVLPVVNFKR- 237 (385)
T ss_pred EEECCchhhhcc--ccCCCHHHHHHHcCCCCCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeEEEEEeCCchh-
Confidence 678844332210 00011112222233334566888888886442223344455554432 3345554433200
Q ss_pred CCCCCCCchhHHhh--CCCcEEEeccchhhhhccCcceeeeeccCcchhhHhhhcCCceeec----cccc---------c
Q 012083 329 GSSTNNPDGLVAKV--ADFGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCW----PWGH---------D 393 (471)
Q Consensus 329 ~~~~~lp~~~~~~~--~~nv~~~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~----P~~~---------D 393 (471)
...+ +.+.+.. ..++.+..+ ....+++.+++ +|+-+|..|+ |++.+|+|+|++ |+.. .
T Consensus 238 --~~~~-~~~~~~~~~~~~v~~~~~-~~~~~l~aADl--~V~~SGt~tl-Ea~a~G~P~Vv~yk~~pl~~~~~~~~~~~~ 310 (385)
T TIGR00215 238 --RLQF-EQIKAEYGPDLQLHLIDG-DARKAMFAADA--ALLASGTAAL-EAALIKTPMVVGYRMKPLTFLIARRLVKTD 310 (385)
T ss_pred --HHHH-HHHHHHhCCCCcEEEECc-hHHHHHHhCCE--EeecCCHHHH-HHHHcCCCEEEEEcCCHHHHHHHHHHHcCC
Confidence 0000 1111111 123333322 23358866666 9999999988 999999999999 8742 3
Q ss_pred hhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcH----HHHHHHHHHHHHHHHHhhcCCChHHHHHHHH
Q 012083 394 HLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSND----VVRKNALKLKELAQKSVTKEGSSSKNLEYFI 466 (471)
Q Consensus 394 Q~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~----~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~ 466 (471)
|..|++.++. .++...+.- ..+|++.|.+.+.++|.|+ +++++.++--+++++...++|.+..+.+.++
T Consensus 311 ~~~~~nil~~-~~~~pel~q---~~~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~i~ 383 (385)
T TIGR00215 311 YISLPNILAN-RLLVPELLQ---EECTPHPLAIALLLLLENGLKAYKEMHRERQFFEELRQRIYCNADSERAAQAVL 383 (385)
T ss_pred eeeccHHhcC-CccchhhcC---CCCCHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHh
Confidence 8889999999 599999863 7799999999999999999 8777777777777777666677776655443
|
Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA |
| >PRK13609 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.3e-15 Score=148.29 Aligned_cols=144 Identities=15% Similarity=0.144 Sum_probs=102.1
Q ss_pred CCCcEEEEecCccccCCHHHHHHHHHHHHhC-CCCEEEEEcCCCCCCCCCCCCchhH---HhhCCCcEEEeccchh-hhh
Q 012083 284 PPGSVIYAAFGSISKLSQQQFNELALGLELA-GQPFLCGVRPGFINGSSTNNPDGLV---AKVADFGKMVKWAPQE-KVL 358 (471)
Q Consensus 284 ~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~lp~~~~---~~~~~nv~~~~~vpq~-~lL 358 (471)
+++++|++..|+.... ..+..+++++.+. +.++++..+.+ ..+.+.+. +..++|+.+.+|+++. .++
T Consensus 200 ~~~~~il~~~G~~~~~--k~~~~li~~l~~~~~~~~viv~G~~------~~~~~~l~~~~~~~~~~v~~~g~~~~~~~l~ 271 (380)
T PRK13609 200 PNKKILLIMAGAHGVL--GNVKELCQSLMSVPDLQVVVVCGKN------EALKQSLEDLQETNPDALKVFGYVENIDELF 271 (380)
T ss_pred CCCcEEEEEcCCCCCC--cCHHHHHHHHhhCCCcEEEEEeCCC------HHHHHHHHHHHhcCCCcEEEEechhhHHHHH
Confidence 3456788877876432 2345667777543 45666666533 01111221 1224688999999875 789
Q ss_pred ccCcceeeeeccCcchhhHhhhcCCceeec-ccccchhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHH
Q 012083 359 AHPSVACYLTHCGWNSTMEGISMGVPFLCW-PWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVV 437 (471)
Q Consensus 359 ~~~~~~~~ItHgG~~s~~eal~~GvP~l~~-P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~ 437 (471)
+.+++ +|+.+|..|+.||+++|+|+|+. |..+.+..|+..+.+ .|+|+... +.+++.++|.++++|++.
T Consensus 272 ~~aD~--~v~~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~-~G~~~~~~-------~~~~l~~~i~~ll~~~~~ 341 (380)
T PRK13609 272 RVTSC--MITKPGGITLSEAAALGVPVILYKPVPGQEKENAMYFER-KGAAVVIR-------DDEEVFAKTEALLQDDMK 341 (380)
T ss_pred HhccE--EEeCCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHh-CCcEEEEC-------CHHHHHHHHHHHHCCHHH
Confidence 77777 99999988999999999999985 666778889999888 59988653 568999999999999876
Q ss_pred HHHHHHHH
Q 012083 438 RKNALKLK 445 (471)
Q Consensus 438 ~~~a~~l~ 445 (471)
+++.++-+
T Consensus 342 ~~~m~~~~ 349 (380)
T PRK13609 342 LLQMKEAM 349 (380)
T ss_pred HHHHHHHH
Confidence 65554433
|
|
| >TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG | Back alignment and domain information |
|---|
Probab=99.69 E-value=3.3e-15 Score=139.70 Aligned_cols=103 Identities=12% Similarity=0.073 Sum_probs=75.2
Q ss_pred cEEEEecCccccCCHHHHHHHHHHHHhC--CCCEEEEEcCCCCCCCCCCCCchhHHh--hCCCcEEEeccchh-hhhccC
Q 012083 287 SVIYAAFGSISKLSQQQFNELALGLELA--GQPFLCGVRPGFINGSSTNNPDGLVAK--VADFGKMVKWAPQE-KVLAHP 361 (471)
Q Consensus 287 ~vv~vs~GS~~~~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~~lp~~~~~~--~~~nv~~~~~vpq~-~lL~~~ 361 (471)
+.|++++|... .......+++++.+. +.++.+++++. ....+.+.+. ..+|+.+..|++++ .+|+.+
T Consensus 171 ~~iLi~~GG~d--~~~~~~~~l~~l~~~~~~~~i~vv~G~~------~~~~~~l~~~~~~~~~i~~~~~~~~m~~lm~~a 242 (279)
T TIGR03590 171 RRVLVSFGGAD--PDNLTLKLLSALAESQINISITLVTGSS------NPNLDELKKFAKEYPNIILFIDVENMAELMNEA 242 (279)
T ss_pred CeEEEEeCCcC--CcCHHHHHHHHHhccccCceEEEEECCC------CcCHHHHHHHHHhCCCEEEEeCHHHHHHHHHHC
Confidence 57899998532 223445566777653 45677777654 1122222222 24688889999987 899666
Q ss_pred cceeeeeccCcchhhHhhhcCCceeecccccchhhhHHH
Q 012083 362 SVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSC 400 (471)
Q Consensus 362 ~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~ 400 (471)
++ +||+|| +|++|++++|+|++++|...+|..||+.
T Consensus 243 Dl--~Is~~G-~T~~E~~a~g~P~i~i~~~~nQ~~~a~~ 278 (279)
T TIGR03590 243 DL--AIGAAG-STSWERCCLGLPSLAICLAENQQSNSQQ 278 (279)
T ss_pred CE--EEECCc-hHHHHHHHcCCCEEEEEecccHHHHhhh
Confidence 66 999999 9999999999999999999999999875
|
This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases. |
| >PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=99.67 E-value=9.3e-15 Score=144.11 Aligned_cols=345 Identities=13% Similarity=0.097 Sum_probs=176.7
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCCcccH
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDDRKDE 97 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 97 (471)
|||+|...++.||+.|.. ++++|.++++++.+++.... ..++.+. ..++.++.++- ..+
T Consensus 2 ~ki~i~~Ggt~G~i~~a~-l~~~L~~~~~~~~~~~~~~~--~~~~~~~----------~~~~~~~~l~~--------~g~ 60 (380)
T PRK00025 2 LRIAIVAGEVSGDLLGAG-LIRALKARAPNLEFVGVGGP--RMQAAGC----------ESLFDMEELAV--------MGL 60 (380)
T ss_pred ceEEEEecCcCHHHHHHH-HHHHHHhcCCCcEEEEEccH--HHHhCCC----------ccccCHHHhhh--------ccH
Confidence 799999999999999999 99999998888888765432 2333211 01233332221 111
Q ss_pred HHHHHHHHh--hccHHHHHHHHHHhcccCCCCeeEEEECCC-cchH--HHHHHHcCCceEEEeCchHHHHHHHhchhhhh
Q 012083 98 AKMTRSISK--VMPGYLEELIQKINQQEEDEKITCVIADVT-FGWA--LQVAAKLELKKASIYTSAPGILAMIMNIPKFI 172 (471)
Q Consensus 98 ~~~~~~~~~--~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~-~~~~--~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~ 172 (471)
.+.+..+.. .....+++++++ .+||+|++-.. ..+. ...|...|||++...... .
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~l~~-------~kPdivi~~~~~~~~~~~a~~a~~~~ip~i~~~~~~-~------------ 120 (380)
T PRK00025 61 VEVLPRLPRLLKIRRRLKRRLLA-------EPPDVFIGIDAPDFNLRLEKKLRKAGIPTIHYVSPS-V------------ 120 (380)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-------cCCCEEEEeCCCCCCHHHHHHHHHCCCCEEEEeCCc-h------------
Confidence 222222111 122234455555 99999887432 2233 334678899988642210 0
Q ss_pred hhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhchhhhhhCCC
Q 012083 173 EAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSANKILPS 252 (471)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~ 252 (471)
|.+. ...... ....++.+++.+...-+.. ....-+
T Consensus 121 --------------------------------~~~~-----~~~~~~-------~~~~~d~i~~~~~~~~~~~-~~~g~~ 155 (380)
T PRK00025 121 --------------------------------WAWR-----QGRAFK-------IAKATDHVLALFPFEAAFY-DKLGVP 155 (380)
T ss_pred --------------------------------hhcC-----chHHHH-------HHHHHhhheeCCccCHHHH-HhcCCC
Confidence 0000 000000 1224455565554333221 111123
Q ss_pred cceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHHHHhC-----CCCEEEEEcCCCC
Q 012083 253 IIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELA-----GQPFLCGVRPGFI 327 (471)
Q Consensus 253 ~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~ 327 (471)
+.++|-...+.. ...+....+...+.-.+++++|++..||........+..++++++.+ +.+++++.+..
T Consensus 156 ~~~~G~p~~~~~---~~~~~~~~~~~~l~~~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~~ii~~~~~-- 230 (380)
T PRK00025 156 VTFVGHPLADAI---PLLPDRAAARARLGLDPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLRFVLPLVNP-- 230 (380)
T ss_pred eEEECcCHHHhc---ccccChHHHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCCh--
Confidence 666763322211 00011122222233333455777777764332222244455554322 33566655422
Q ss_pred CCCCCCCCchhHHhh----CCCcEEEeccch-hhhhccCcceeeeeccCcchhhHhhhcCCceeecccc------c--ch
Q 012083 328 NGSSTNNPDGLVAKV----ADFGKMVKWAPQ-EKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWG------H--DH 394 (471)
Q Consensus 328 ~~~~~~lp~~~~~~~----~~nv~~~~~vpq-~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~------~--DQ 394 (471)
...+.+.+.. .-++.+.. +. ..+++.+++ +|+.+|.+++ |++.+|+|+|+.|-. . .|
T Consensus 231 -----~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~aDl--~v~~sG~~~l-Ea~a~G~PvI~~~~~~~~~~~~~~~~ 300 (380)
T PRK00025 231 -----KRREQIEEALAEYAGLEVTLLD--GQKREAMAAADA--ALAASGTVTL-ELALLKVPMVVGYKVSPLTFWIAKRL 300 (380)
T ss_pred -----hhHHHHHHHHhhcCCCCeEEEc--ccHHHHHHhCCE--EEECccHHHH-HHHHhCCCEEEEEccCHHHHHHHHHH
Confidence 1111222212 12333322 22 467866666 9999998887 999999999998432 1 22
Q ss_pred hhh-----HHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHH
Q 012083 395 LYI-----KSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKELAQKSVTKEGSSSKNLEYFIKQ 468 (471)
Q Consensus 395 ~~n-----a~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~ 468 (471)
..| +..+++ .+++..+.. ...+++.|.+++.++++|++.+++..+-.+.+++.. ..|+.....+.+.+.
T Consensus 301 ~~~~~~~l~~~~~~-~~~~~~~~~---~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~-~~~a~~~~~~~i~~~ 374 (380)
T PRK00025 301 VKVPYVSLPNLLAG-RELVPELLQ---EEATPEKLARALLPLLADGARRQALLEGFTELHQQL-RCGADERAAQAVLEL 374 (380)
T ss_pred HcCCeeehHHHhcC-CCcchhhcC---CCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHh-CCCHHHHHHHHHHHH
Confidence 222 233333 233433432 557889999999999999987776666555555543 345555444444443
|
|
| >PRK13608 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=3.2e-13 Score=133.19 Aligned_cols=146 Identities=14% Similarity=0.159 Sum_probs=101.5
Q ss_pred CCCcEEEEecCccccCCHHHHHHHHHHH-Hh-CCCCEEEEEcCCCCCCCCCCCCchhHHh--hCCCcEEEeccchh-hhh
Q 012083 284 PPGSVIYAAFGSISKLSQQQFNELALGL-EL-AGQPFLCGVRPGFINGSSTNNPDGLVAK--VADFGKMVKWAPQE-KVL 358 (471)
Q Consensus 284 ~~~~vv~vs~GS~~~~~~~~~~~~~~al-~~-~~~~~i~~~~~~~~~~~~~~lp~~~~~~--~~~nv~~~~~vpq~-~lL 358 (471)
+++++|++..|++.. ...+..+++++ +. .+.++++..+++ ..+-+.+.+. ..+++.+.+|+.+. .++
T Consensus 200 ~~~~~ilv~~G~lg~--~k~~~~li~~~~~~~~~~~~vvv~G~~------~~l~~~l~~~~~~~~~v~~~G~~~~~~~~~ 271 (391)
T PRK13608 200 PDKQTILMSAGAFGV--SKGFDTMITDILAKSANAQVVMICGKS------KELKRSLTAKFKSNENVLILGYTKHMNEWM 271 (391)
T ss_pred CCCCEEEEECCCccc--chhHHHHHHHHHhcCCCceEEEEcCCC------HHHHHHHHHHhccCCCeEEEeccchHHHHH
Confidence 345688888898652 23355555554 22 235666665543 1111222221 13578888999765 688
Q ss_pred ccCcceeeeeccCcchhhHhhhcCCceeec-ccccchhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHH
Q 012083 359 AHPSVACYLTHCGWNSTMEGISMGVPFLCW-PWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVV 437 (471)
Q Consensus 359 ~~~~~~~~ItHgG~~s~~eal~~GvP~l~~-P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~ 437 (471)
+.+++ +|+..|..|+.||+++|+|+|+. |..+.|..|+..+.+ .|+|+... +.+++.++|.++++|++.
T Consensus 272 ~~aDl--~I~k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~-~G~g~~~~-------~~~~l~~~i~~ll~~~~~ 341 (391)
T PRK13608 272 ASSQL--MITKPGGITISEGLARCIPMIFLNPAPGQELENALYFEE-KGFGKIAD-------TPEEAIKIVASLTNGNEQ 341 (391)
T ss_pred HhhhE--EEeCCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHh-CCcEEEeC-------CHHHHHHHHHHHhcCHHH
Confidence 77777 99988888999999999999998 776778899999999 69998763 678999999999999754
Q ss_pred HHHHHHHHHHHHH
Q 012083 438 RKNALKLKELAQK 450 (471)
Q Consensus 438 ~~~a~~l~~~~~~ 450 (471)
++ +|++..++
T Consensus 342 ~~---~m~~~~~~ 351 (391)
T PRK13608 342 LT---NMISTMEQ 351 (391)
T ss_pred HH---HHHHHHHH
Confidence 44 34444443
|
|
| >PLN02605 monogalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.55 E-value=4.2e-12 Score=125.01 Aligned_cols=149 Identities=13% Similarity=0.033 Sum_probs=98.2
Q ss_pred ccCCCCCcEEEEecCccccCCHHHHHHHHHHHHh---------CCCCEEEEEcCCCCCCCCCCCCchhHHh-hCCCcEEE
Q 012083 280 LDKQPPGSVIYAAFGSISKLSQQQFNELALGLEL---------AGQPFLCGVRPGFINGSSTNNPDGLVAK-VADFGKMV 349 (471)
Q Consensus 280 l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~---------~~~~~i~~~~~~~~~~~~~~lp~~~~~~-~~~nv~~~ 349 (471)
+.-.+++++|++..|+..... +..+++++.. .+..+++.++.+ ..+-+.+.+. ...++++.
T Consensus 200 ~gl~~~~~~il~~Gg~~g~~~---~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~------~~~~~~L~~~~~~~~v~~~ 270 (382)
T PLN02605 200 LGMDEDLPAVLLMGGGEGMGP---LEETARALGDSLYDKNLGKPIGQVVVICGRN------KKLQSKLESRDWKIPVKVR 270 (382)
T ss_pred cCCCCCCcEEEEECCCccccc---HHHHHHHHHHhhccccccCCCceEEEEECCC------HHHHHHHHhhcccCCeEEE
Confidence 333344567777766654333 2333333322 234566666643 1111111111 13467888
Q ss_pred eccchh-hhhccCcceeeeeccCcchhhHhhhcCCceeecccccchh-hhHHHHHhhhcceeeecCCCCCCcCHhHHHHH
Q 012083 350 KWAPQE-KVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHL-YIKSCICDDWKIGLWLEPDDNGIIGRHEIKRK 427 (471)
Q Consensus 350 ~~vpq~-~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~-~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~ 427 (471)
+|+++. .+++.+++ +|+.+|.+|+.||+++|+|+|+.+....|. .|+..+.+ .|.|..+. ++++|.++
T Consensus 271 G~~~~~~~l~~aaDv--~V~~~g~~ti~EAma~g~PvI~~~~~pgqe~gn~~~i~~-~g~g~~~~-------~~~~la~~ 340 (382)
T PLN02605 271 GFVTNMEEWMGACDC--IITKAGPGTIAEALIRGLPIILNGYIPGQEEGNVPYVVD-NGFGAFSE-------SPKEIARI 340 (382)
T ss_pred eccccHHHHHHhCCE--EEECCCcchHHHHHHcCCCEEEecCCCccchhhHHHHHh-CCceeecC-------CHHHHHHH
Confidence 999875 78866666 999999999999999999999998766665 69998998 59998652 78999999
Q ss_pred HHHHhCc-HHHHHHHHHHHHH
Q 012083 428 VDELLSN-DVVRKNALKLKEL 447 (471)
Q Consensus 428 i~~ll~~-~~~~~~a~~l~~~ 447 (471)
|.+++.| ++.+++.++.+++
T Consensus 341 i~~ll~~~~~~~~~m~~~~~~ 361 (382)
T PLN02605 341 VAEWFGDKSDELEAMSENALK 361 (382)
T ss_pred HHHHHcCCHHHHHHHHHHHHH
Confidence 9999988 6655444444433
|
|
| >TIGR03492 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=99.53 E-value=4.7e-12 Score=124.28 Aligned_cols=333 Identities=12% Similarity=0.006 Sum_probs=187.5
Q ss_pred CCCcccHHHHHHHHHHHHh--CCCeEE---EEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCCcccHHH
Q 012083 25 FPAQGHVASLMKLAHRLAD--CRIKVT---FVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDDRKDEAK 99 (471)
Q Consensus 25 ~~~~GH~~p~~~La~~L~~--rGh~Vt---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 99 (471)
..++|-=.-.++||++|++ .|++|. ++++..-.+ +.. ....| .+..+|.+=- ....+.+
T Consensus 4 snghged~~a~ai~~~l~~~~~~~~v~~~p~vG~~~~~e---~~~---------ip~~g-~~~~~~sgg~---~~~~~~~ 67 (396)
T TIGR03492 4 SNGHGEDLIAARIAKALLQLSPDLNLEALPLVGEGRAYQ---NLG---------IPIIG-PTKELPSGGF---SYQSLRG 67 (396)
T ss_pred CCCchHHHHHHHHHHHHHhhCCCCCeEEeCcccCCHHHh---hCC---------CceeC-CCCCCCCCCc---cCCCHHH
Confidence 3566767778899999998 699999 998876543 211 11113 4444432211 1233444
Q ss_pred HHHHHHhhccHHHHHHHHHHhcccCCC--CeeEEEECCCcchHHHHHHHcCCceEEEeCchHHHHHHHhchhhhhhhCCC
Q 012083 100 MTRSISKVMPGYLEELIQKINQQEEDE--KITCVIADVTFGWALQVAAKLELKKASIYTSAPGILAMIMNIPKFIEAGII 177 (471)
Q Consensus 100 ~~~~~~~~~~~~~~~ll~~l~~~~~~~--~pD~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~ 177 (471)
.+....+.....+.+-+..+++ + +||+||+-.-+. +..+|...|+|++++.+.-......
T Consensus 68 ~~~~~~~gl~~~~~~~~~~~~~----~~~~p~~v~~~Gg~v-~~~aA~~~~~p~~~~~~~esn~~~~------------- 129 (396)
T TIGR03492 68 LLRDLRAGLVGLTLGQWRALRK----WAKKGDLIVAVGDIV-PLLFAWLSGKPYAFVGTAKSDYYWE------------- 129 (396)
T ss_pred HHHHHHhhHHHHHHHHHHHHHH----HhhcCCEEEEECcHH-HHHHHHHcCCCceEEEeeccceeec-------------
Confidence 4444443222222222223333 5 999999876665 8889999999999965532211000
Q ss_pred CCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHh-hhccCcEEEEcchhhhchhhhhhCCCccee
Q 012083 178 SSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQ-NIEASDRILCTWFHELAPSANKILPSIIPV 256 (471)
Q Consensus 178 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~s~~~l~~~~~~~~~~~~~v 256 (471)
+..+.+ ..+....+||....++ +... ..+.++.+++++...-+.. ....-++.++
T Consensus 130 ~~~~~~-~~~~~~~~~G~~~~p~----------------------e~n~l~~~~a~~v~~~~~~t~~~l-~~~g~k~~~v 185 (396)
T TIGR03492 130 SGPRRS-PSDEYHRLEGSLYLPW----------------------ERWLMRSRRCLAVFVRDRLTARDL-RRQGVRASYL 185 (396)
T ss_pred CCCCCc-cchhhhccCCCccCHH----------------------HHHHhhchhhCEEeCCCHHHHHHH-HHCCCeEEEe
Confidence 000000 0001111222211111 0111 1256788887775544332 2222488999
Q ss_pred ccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHHHHhC----CCCEEEEEcCCCCCCCCC
Q 012083 257 GPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELA----GQPFLCGVRPGFINGSST 332 (471)
Q Consensus 257 Gp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~----~~~~i~~~~~~~~~~~~~ 332 (471)
|-...+.-. ..... . + .+++++|.+--||....-.+.+..++++++.+ +..|++.+.+..
T Consensus 186 GnPv~d~l~-----~~~~~--~-l--~~~~~~lllLpGSR~ae~~~~lp~~l~al~~L~~~~~~~~v~~~~~~~------ 249 (396)
T TIGR03492 186 GNPMMDGLE-----PPERK--P-L--LTGRFRIALLPGSRPPEAYRNLKLLLRALEALPDSQPFVFLAAIVPSL------ 249 (396)
T ss_pred CcCHHhcCc-----ccccc--c-c--CCCCCEEEEECCCCHHHHHccHHHHHHHHHHHhhCCCeEEEEEeCCCC------
Confidence 955444321 00100 1 1 22345888888986444444455666666554 567777774431
Q ss_pred CCCchhHHhh-------------------CCCcEEEeccch-hhhhccCcceeeeeccCcchhhHhhhcCCceeeccccc
Q 012083 333 NNPDGLVAKV-------------------ADFGKMVKWAPQ-EKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGH 392 (471)
Q Consensus 333 ~lp~~~~~~~-------------------~~nv~~~~~vpq-~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~ 392 (471)
..+.+.+.. .+++.+..+..+ ..+++.+++ +|+-+|..| .|+..+|+|+|++|...
T Consensus 250 -~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~ADl--vI~rSGt~T-~E~a~lg~P~Ilip~~~ 325 (396)
T TIGR03492 250 -SLEKLQAILEDLGWQLEGSSEDQTSLFQKGTLEVLLGRGAFAEILHWADL--GIAMAGTAT-EQAVGLGKPVIQLPGKG 325 (396)
T ss_pred -CHHHHHHHHHhcCceecCCccccchhhccCceEEEechHhHHHHHHhCCE--EEECcCHHH-HHHHHhCCCEEEEeCCC
Confidence 001111111 123455555544 478877777 999999766 99999999999999877
Q ss_pred chhhhHHHHHhhh----cceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHH
Q 012083 393 DHLYIKSCICDDW----KIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNAL 442 (471)
Q Consensus 393 DQ~~na~~v~~~~----G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~ 442 (471)
.|. |+...++ . |.++.+. ..+.+.|.+++.++++|++.+++..
T Consensus 326 ~q~-na~~~~~-~~~l~g~~~~l~-----~~~~~~l~~~l~~ll~d~~~~~~~~ 372 (396)
T TIGR03492 326 PQF-TYGFAEA-QSRLLGGSVFLA-----SKNPEQAAQVVRQLLADPELLERCR 372 (396)
T ss_pred CHH-HHHHHHh-hHhhcCCEEecC-----CCCHHHHHHHHHHHHcCHHHHHHHH
Confidence 786 9877666 3 6666653 2455999999999999987665555
|
This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown. |
| >PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.52 E-value=1e-15 Score=132.29 Aligned_cols=140 Identities=14% Similarity=0.137 Sum_probs=96.1
Q ss_pred EEEEecCccccCCHH-HHHHHHHHHHh--CCCCEEEEEcCCCCCCCCCCCCchhHHhhCCCcEEEeccc-hhhhhccCcc
Q 012083 288 VIYAAFGSISKLSQQ-QFNELALGLEL--AGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAP-QEKVLAHPSV 363 (471)
Q Consensus 288 vv~vs~GS~~~~~~~-~~~~~~~al~~--~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~~~vp-q~~lL~~~~~ 363 (471)
+|+|+.||.....-. .+..+...+.. ...++++.+++. ........ ......|+.+.+|++ ...+++.+++
T Consensus 1 tilv~gGs~g~~~l~~~v~~~~~~~~~~~~~~~viv~~G~~----~~~~~~~~-~~~~~~~v~~~~~~~~m~~~m~~aDl 75 (167)
T PF04101_consen 1 TILVTGGSQGARDLNRLVLKILELLAEKHKNIQVIVQTGKN----NYEELKIK-VENFNPNVKVFGFVDNMAELMAAADL 75 (167)
T ss_dssp -EEEEETTTSHHHHHCCCCCHHHHHHHHHHHCCCCCCCTTC----ECHHHCCC-HCCTTCCCEEECSSSSHHHHHHHHSE
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHhhcCCCcEEEEEECCC----cHHHHHHH-HhccCCcEEEEechhhHHHHHHHcCE
Confidence 489999985432111 12223333332 257888888755 11111111 111136889999999 5689977776
Q ss_pred eeeeeccCcchhhHhhhcCCceeeccccc----chhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHH
Q 012083 364 ACYLTHCGWNSTMEGISMGVPFLCWPWGH----DHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVR 438 (471)
Q Consensus 364 ~~~ItHgG~~s~~eal~~GvP~l~~P~~~----DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~ 438 (471)
+|||||.||++|++++|+|+|++|... +|..||..+++ .|+|..+.. ...+.+.|.++|.+++.++...
T Consensus 76 --vIs~aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~-~g~~~~~~~---~~~~~~~L~~~i~~l~~~~~~~ 148 (167)
T PF04101_consen 76 --VISHAGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAK-KGAAIMLDE---SELNPEELAEAIEELLSDPEKL 148 (167)
T ss_dssp --EEECS-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHH-CCCCCCSEC---CC-SCCCHHHHHHCHCCCHH-S
T ss_pred --EEeCCCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHH-cCCccccCc---ccCCHHHHHHHHHHHHcCcHHH
Confidence 999999999999999999999999988 99999999999 699999985 6677899999999999998653
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B. |
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.3e-10 Score=111.52 Aligned_cols=321 Identities=13% Similarity=0.057 Sum_probs=170.5
Q ss_pred cccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCCcccHHHHHHHHHhh
Q 012083 28 QGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDDRKDEAKMTRSISKV 107 (471)
Q Consensus 28 ~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (471)
.|+...+..|+++|+++||+|++++.......... .....+..++.. ..... .. . -.
T Consensus 14 ~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~-------------~~~~~~~~~~~~--~~~~~-~~------~-~~ 70 (364)
T cd03814 14 NGVVRTLQRLVEHLRARGHEVLVIAPGPFRESEGP-------------ARVVPVPSVPLP--GYPEI-RL------A-LP 70 (364)
T ss_pred cceehHHHHHHHHHHHCCCEEEEEeCCchhhccCC-------------CCceeecccccC--cccce-Ee------c-cc
Confidence 78999999999999999999999998654321110 001111111100 00000 00 0 00
Q ss_pred ccHHHHHHHHHHhcccCCCCeeEEEECCCcc---hHHHHHHHcCCceEEEeCchHHHHHHHhchhhhhhhCCCCCCcccc
Q 012083 108 MPGYLEELIQKINQQEEDEKITCVIADVTFG---WALQVAAKLELKKASIYTSAPGILAMIMNIPKFIEAGIISSDGIVI 184 (471)
Q Consensus 108 ~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~---~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 184 (471)
....+...++. .+||+|++..... .+..++...++|++.............
T Consensus 71 ~~~~~~~~~~~-------~~pdii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~------------------- 124 (364)
T cd03814 71 PRRRVRRLLDA-------FAPDVVHIATPGPLGLAALRAARRLGIPVVTSYHTDFPEYLRY------------------- 124 (364)
T ss_pred chhhHHHHHHh-------cCCCEEEEeccchhhHHHHHHHHHcCCCEEEEEecChHHHhhh-------------------
Confidence 11123333334 8999998764432 456778889999988654322110000
Q ss_pred cccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHH-hhhccCcEEEEcchhhhchhhhhhCCCcceeccccCCC
Q 012083 185 KNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIR-QNIEASDRILCTWFHELAPSANKILPSIIPVGPLIANG 263 (471)
Q Consensus 185 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~vGp~~~~~ 263 (471)
.. . .+ ......... ....+++.+++.+....+.......+++..+.......
T Consensus 125 ----------~~-------~-~~---------~~~~~~~~~~~~~~~~d~i~~~s~~~~~~~~~~~~~~~~~~~~g~~~~ 177 (364)
T cd03814 125 ----------YG-------L-GP---------LSWLAWAYLRWFHNRADRVLVPSPSLADELRARGFRRVRLWPRGVDTE 177 (364)
T ss_pred ----------cc-------c-ch---------HhHhhHHHHHHHHHhCCEEEeCCHHHHHHHhccCCCceeecCCCcccc
Confidence 00 0 00 000001111 12357899999888776532111223444333222111
Q ss_pred CCCCCCCcCcchhcccccCCCCCcEEEEecCcccc-CCHHHHHHHHHHHHh-CCCCEEEEEcCCCCCCCCCCCCchhHHh
Q 012083 264 QPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISK-LSQQQFNELALGLEL-AGQPFLCGVRPGFINGSSTNNPDGLVAK 341 (471)
Q Consensus 264 ~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~-~~~~~~~~~~~al~~-~~~~~i~~~~~~~~~~~~~~lp~~~~~~ 341 (471)
.. .+.........-+. ..++.+++..|+... ...+.+..++..+.. .+..+++.-.+. . ...+ +.
T Consensus 178 ~~--~~~~~~~~~~~~~~--~~~~~~i~~~G~~~~~k~~~~~i~~~~~l~~~~~~~l~i~G~~~----~----~~~~-~~ 244 (364)
T cd03814 178 LF--HPRRRDEALRARLG--PPDRPVLLYVGRLAPEKNLEALLDADLPLRRRPPVRLVIVGDGP----A----RARL-EA 244 (364)
T ss_pred cc--CcccccHHHHHHhC--CCCCeEEEEEeccccccCHHHHHHHHHHhhhcCCceEEEEeCCc----h----HHHH-hc
Confidence 00 00011111111111 123466677777532 223334444444432 234444443322 0 0111 12
Q ss_pred hCCCcEEEeccchh---hhhccCcceeeeeccC----cchhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeecCC
Q 012083 342 VADFGKMVKWAPQE---KVLAHPSVACYLTHCG----WNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPD 414 (471)
Q Consensus 342 ~~~nv~~~~~vpq~---~lL~~~~~~~~ItHgG----~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~ 414 (471)
..+|+.+.+|+++. .+++.+++ +|+.+. .+++.||+++|+|+|+.+... +...+.+ .+.|.....
T Consensus 245 ~~~~v~~~g~~~~~~~~~~~~~~d~--~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~~----~~~~i~~-~~~g~~~~~- 316 (364)
T cd03814 245 RYPNVHFLGFLDGEELAAAYASADV--FVFPSRTETFGLVVLEAMASGLPVVAPDAGG----PADIVTD-GENGLLVEP- 316 (364)
T ss_pred cCCcEEEEeccCHHHHHHHHHhCCE--EEECcccccCCcHHHHHHHcCCCEEEcCCCC----chhhhcC-CcceEEcCC-
Confidence 35789999999976 47876766 886654 478999999999999887543 5556666 488988853
Q ss_pred CCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHHHH
Q 012083 415 DNGIIGRHEIKRKVDELLSNDVVRKNALKLKELAQ 449 (471)
Q Consensus 415 ~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~ 449 (471)
-+.+++.++|.+++.|++.+++..+-+....
T Consensus 317 ----~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~ 347 (364)
T cd03814 317 ----GDAEAFAAALAALLADPELRRRMAARARAEA 347 (364)
T ss_pred ----CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 4678899999999999876666555554443
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.2e-13 Score=113.95 Aligned_cols=126 Identities=17% Similarity=0.115 Sum_probs=84.0
Q ss_pred EEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCCcccHHH
Q 012083 20 VLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDDRKDEAK 99 (471)
Q Consensus 20 Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 99 (471)
|+|.+.|+.||++|+++||++|++|||+|++++++.+.+.+++. |+.|.+++... ..........
T Consensus 1 Ili~~~Gt~Ghv~P~lala~~L~~rGh~V~~~~~~~~~~~v~~~--------------Gl~~~~~~~~~-~~~~~~~~~~ 65 (139)
T PF03033_consen 1 ILIATGGTRGHVYPFLALARALRRRGHEVRLATPPDFRERVEAA--------------GLEFVPIPGDS-RLPRSLEPLA 65 (139)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHTT-EEEEEETGGGHHHHHHT--------------T-EEEESSSCG-GGGHHHHHHH
T ss_pred CEEEEcCChhHHHHHHHHHHHHhccCCeEEEeecccceeccccc--------------CceEEEecCCc-CcCcccchhh
Confidence 78999999999999999999999999999999999999999877 99999987660 0000001111
Q ss_pred HHHHHHhh--ccHHHHHHHHHHh-----cccCCCCeeEEEECCCcchHHHHHHHcCCceEEEeCchHH
Q 012083 100 MTRSISKV--MPGYLEELIQKIN-----QQEEDEKITCVIADVTFGWALQVAAKLELKKASIYTSAPG 160 (471)
Q Consensus 100 ~~~~~~~~--~~~~~~~ll~~l~-----~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~ 160 (471)
.+....+. ....+.+.+.... ..+....+|+++.+.....+..+|+++|||++.....+..
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~vaE~~~iP~~~~~~~p~~ 133 (139)
T PF03033_consen 66 NLRRLARLIRGLEEAMRILARFRPDLVVAAGGYVADDVIIAAPLAFAAALVAEQLGIPGVANRLFPWF 133 (139)
T ss_dssp HHHCHHHHHHHHHHHHHHHHHHHHCCCCHCTTTTECCEECHHHHHTHHHHHHHHHTS-EEEEESSGGG
T ss_pred hhhhHHHHhhhhhHHHHHhhccCcchhhhccCcccchHHHhhhhcCccceeEhhhCchHHHHhhCCcC
Confidence 11111111 1111222222211 1111147888888888888999999999999998776654
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B .... |
| >PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.1e-09 Score=110.76 Aligned_cols=334 Identities=14% Similarity=0.038 Sum_probs=170.3
Q ss_pred CCCcEEEEEcCCC-----cccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCC-C
Q 012083 15 KTNVHVLLVSFPA-----QGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDG-L 88 (471)
Q Consensus 15 ~~~~~Il~~~~~~-----~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~ 88 (471)
+++|||+++..+. .|=-..+..+++.|.++||+|++++....... . ..++....+... .
T Consensus 56 ~~~mrI~~~~~~~~~~~~gG~~~~~~~l~~~L~~~G~eV~vlt~~~~~~~--~-------------~~g~~v~~~~~~~~ 120 (465)
T PLN02871 56 SRPRRIALFVEPSPFSYVSGYKNRFQNFIRYLREMGDEVLVVTTDEGVPQ--E-------------FHGAKVIGSWSFPC 120 (465)
T ss_pred CCCceEEEEECCcCCcccccHHHHHHHHHHHHHHCCCeEEEEecCCCCCc--c-------------ccCceeeccCCcCC
Confidence 4679999885432 34456789999999999999999998643211 0 014433322110 0
Q ss_pred CCCCCcccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcc---hHHHHHHHcCCceEEEeCchHHHHHHH
Q 012083 89 EPEDDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFG---WALQVAAKLELKKASIYTSAPGILAMI 165 (471)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~---~~~~~A~~lgiP~v~~~~~~~~~~~~~ 165 (471)
+... .. ...+ .....+..++++ .+||+|.+..... .+..+|...|+|+|.........
T Consensus 121 ~~~~---~~---~~~~--~~~~~l~~~i~~-------~kpDiIh~~~~~~~~~~~~~~ak~~~ip~V~~~h~~~~~---- 181 (465)
T PLN02871 121 PFYQ---KV---PLSL--ALSPRIISEVAR-------FKPDLIHASSPGIMVFGALFYAKLLCVPLVMSYHTHVPV---- 181 (465)
T ss_pred ccCC---Cc---eeec--cCCHHHHHHHHh-------CCCCEEEECCCchhHHHHHHHHHHhCCCEEEEEecCchh----
Confidence 0000 00 0000 011134444555 8999997654322 34557888999998854321100
Q ss_pred hchhhhhhhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhchh
Q 012083 166 MNIPKFIEAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPS 245 (471)
Q Consensus 166 ~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~ 245 (471)
..+.+. . ... ...+... .+ .....+|.+++.+...-+.-
T Consensus 182 -------------------------~~~~~~---~-----~~~-----~~~~~~~-~r--~~~~~ad~ii~~S~~~~~~l 220 (465)
T PLN02871 182 -------------------------YIPRYT---F-----SWL-----VKPMWDI-IR--FLHRAADLTLVTSPALGKEL 220 (465)
T ss_pred -------------------------hhhccc---c-----hhh-----HHHHHHH-HH--HHHhhCCEEEECCHHHHHHH
Confidence 000000 0 000 0000000 01 12357888888886654432
Q ss_pred hhhh---CCCcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHHHHhCC-CCEEEE
Q 012083 246 ANKI---LPSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELAG-QPFLCG 321 (471)
Q Consensus 246 ~~~~---~~~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~-~~~i~~ 321 (471)
.... ..++..+..-...... .+.........-+....+...+++..|++.. ...+..+++++++.. .++++
T Consensus 221 ~~~~~~~~~kv~vi~nGvd~~~f--~p~~~~~~~~~~~~~~~~~~~~i~~vGrl~~--~K~~~~li~a~~~~~~~~l~i- 295 (465)
T PLN02871 221 EAAGVTAANRIRVWNKGVDSESF--HPRFRSEEMRARLSGGEPEKPLIVYVGRLGA--EKNLDFLKRVMERLPGARLAF- 295 (465)
T ss_pred HHcCCCCcCeEEEeCCccCcccc--CCccccHHHHHHhcCCCCCCeEEEEeCCCch--hhhHHHHHHHHHhCCCcEEEE-
Confidence 1111 1233322211111100 0001111111111111112245566687532 233556777776653 45444
Q ss_pred EcCCCCCCCCCCCCchhHHhh-CCCcEEEeccchh---hhhccCcceeeeeccC----cchhhHhhhcCCceeecccccc
Q 012083 322 VRPGFINGSSTNNPDGLVAKV-ADFGKMVKWAPQE---KVLAHPSVACYLTHCG----WNSTMEGISMGVPFLCWPWGHD 393 (471)
Q Consensus 322 ~~~~~~~~~~~~lp~~~~~~~-~~nv~~~~~vpq~---~lL~~~~~~~~ItHgG----~~s~~eal~~GvP~l~~P~~~D 393 (471)
+++. ...+.+.+.. ..++.+.+|+|+. .+++.+++ ||.-.. .+++.||+++|+|+|+....+
T Consensus 296 vG~G-------~~~~~l~~~~~~~~V~f~G~v~~~ev~~~~~~aDv--~V~pS~~E~~g~~vlEAmA~G~PVI~s~~gg- 365 (465)
T PLN02871 296 VGDG-------PYREELEKMFAGTPTVFTGMLQGDELSQAYASGDV--FVMPSESETLGFVVLEAMASGVPVVAARAGG- 365 (465)
T ss_pred EeCC-------hHHHHHHHHhccCCeEEeccCCHHHHHHHHHHCCE--EEECCcccccCcHHHHHHHcCCCEEEcCCCC-
Confidence 4332 1112222211 3578888999864 47877777 775433 457889999999999875432
Q ss_pred hhhhHHHHHh---hhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHH
Q 012083 394 HLYIKSCICD---DWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKEL 447 (471)
Q Consensus 394 Q~~na~~v~~---~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~ 447 (471)
....+.. . +.|..+++ -+.+++.++|.++++|++.+++..+-+..
T Consensus 366 ---~~eiv~~~~~~-~~G~lv~~-----~d~~~la~~i~~ll~~~~~~~~~~~~a~~ 413 (465)
T PLN02871 366 ---IPDIIPPDQEG-KTGFLYTP-----GDVDDCVEKLETLLADPELRERMGAAARE 413 (465)
T ss_pred ---cHhhhhcCCCC-CceEEeCC-----CCHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 2223332 3 67888854 36799999999999998665554444443
|
|
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.33 E-value=9.5e-09 Score=101.91 Aligned_cols=91 Identities=20% Similarity=0.196 Sum_probs=63.3
Q ss_pred CCCcEEEeccchh---hhhccCcceeeeec-cC-cchhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeecCCCCC
Q 012083 343 ADFGKMVKWAPQE---KVLAHPSVACYLTH-CG-WNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNG 417 (471)
Q Consensus 343 ~~nv~~~~~vpq~---~lL~~~~~~~~ItH-gG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~ 417 (471)
.++|.+.+++|+. .+++.+++-++.+. .| .+++.||+++|+|+|+.. .......+.. -..|..++.
T Consensus 280 ~~~V~f~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~PVIas~----~~g~~e~i~~-~~~G~lv~~---- 350 (396)
T cd03818 280 LSRVHFLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGCLVVGSD----TAPVREVITD-GENGLLVDF---- 350 (396)
T ss_pred cceEEEeCCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCCCCEEEcC----CCCchhhccc-CCceEEcCC----
Confidence 3678889999976 46767777333232 22 348999999999999864 3445555555 256777743
Q ss_pred CcCHhHHHHHHHHHhCcHHHHHHHHH
Q 012083 418 IIGRHEIKRKVDELLSNDVVRKNALK 443 (471)
Q Consensus 418 ~~~~~~l~~~i~~ll~~~~~~~~a~~ 443 (471)
-+.+++.++|.++++|++.+++..+
T Consensus 351 -~d~~~la~~i~~ll~~~~~~~~l~~ 375 (396)
T cd03818 351 -FDPDALAAAVIELLDDPARRARLRR 375 (396)
T ss_pred -CCHHHHHHHHHHHHhCHHHHHHHHH
Confidence 4689999999999999865444433
|
ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). |
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.30 E-value=4.7e-09 Score=102.01 Aligned_cols=89 Identities=16% Similarity=0.109 Sum_probs=65.0
Q ss_pred CCCcEEEeccchh---hhhccCcceeeeec----c-CcchhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeecCC
Q 012083 343 ADFGKMVKWAPQE---KVLAHPSVACYLTH----C-GWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPD 414 (471)
Q Consensus 343 ~~nv~~~~~vpq~---~lL~~~~~~~~ItH----g-G~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~ 414 (471)
.+++.+.+|+++. .+++.+++ +|+. . ...++.||+++|+|+|+.+. ..+...+.. -+.|..+..
T Consensus 242 ~~~v~~~g~~~~~~~~~~~~~ad~--~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i~~-~~~g~~~~~- 313 (359)
T cd03823 242 DPRVEFLGAYPQEEIDDFYAEIDV--LVVPSIWPENFPLVIREALAAGVPVIASDI----GGMAELVRD-GVNGLLFPP- 313 (359)
T ss_pred CCeEEEeCCCCHHHHHHHHHhCCE--EEEcCcccCCCChHHHHHHHCCCCEEECCC----CCHHHHhcC-CCcEEEECC-
Confidence 5788899999865 46877776 6632 3 34479999999999998754 345556666 367888854
Q ss_pred CCCCcCHhHHHHHHHHHhCcHHHHHHHHH
Q 012083 415 DNGIIGRHEIKRKVDELLSNDVVRKNALK 443 (471)
Q Consensus 415 ~~~~~~~~~l~~~i~~ll~~~~~~~~a~~ 443 (471)
-+.+++.+++.++++|++.++++.+
T Consensus 314 ----~d~~~l~~~i~~l~~~~~~~~~~~~ 338 (359)
T cd03823 314 ----GDAEDLAAALERLIDDPDLLERLRA 338 (359)
T ss_pred ----CCHHHHHHHHHHHHhChHHHHHHHH
Confidence 3579999999999998865555444
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). |
| >TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase | Back alignment and domain information |
|---|
Probab=99.29 E-value=5.5e-10 Score=109.46 Aligned_cols=346 Identities=13% Similarity=0.064 Sum_probs=176.5
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhC-CCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCCccc
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADC-RIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDDRKD 96 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~r-Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 96 (471)
|||+++. +++.|+.-+.+|.++|.++ +.++.++.+....+........ + ++.. .++-.+.. ....
T Consensus 1 ~~i~~~~-gtr~~~~~~~p~~~~l~~~~~~~~~~~~tg~h~~~~~~~~~~-~---------~i~~-~~~~~~~~--~~~~ 66 (365)
T TIGR00236 1 LKVSIVL-GTRPEAIKMAPLIRALKKYPEIDSYVIVTAQHREMLDQVLDL-F---------HLPP-DYDLNIMS--PGQT 66 (365)
T ss_pred CeEEEEE-ecCHHHHHHHHHHHHHhhCCCCCEEEEEeCCCHHHHHHHHHh-c---------CCCC-CeeeecCC--CCCC
Confidence 4888776 8999999999999999986 5666666665544433332111 1 3321 01001111 1222
Q ss_pred HHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECC--Cc-chHHHHHHHcCCceEEEeCchHHHHHHHhchhhhhh
Q 012083 97 EAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADV--TF-GWALQVAAKLELKKASIYTSAPGILAMIMNIPKFIE 173 (471)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~--~~-~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~ 173 (471)
..+.... +...+.+++++ .+||+|++-. .. .++..+|..+|||++.+....-+
T Consensus 67 ~~~~~~~----~~~~l~~~l~~-------~~pDiv~~~gd~~~~la~a~aa~~~~ipv~h~~~g~~s------------- 122 (365)
T TIGR00236 67 LGEITSN----MLEGLEELLLE-------EKPDIVLVQGDTTTTLAGALAAFYLQIPVGHVEAGLRT------------- 122 (365)
T ss_pred HHHHHHH----HHHHHHHHHHH-------cCCCEEEEeCCchHHHHHHHHHHHhCCCEEEEeCCCCc-------------
Confidence 2222222 12345566666 8999999853 22 36788999999999865321100
Q ss_pred hCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhchhhh-hh-CC
Q 012083 174 AGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSAN-KI-LP 251 (471)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~-~~-~~ 251 (471)
...+. .++ ....+..+. ..++.+++.+...-+.-.. .. +.
T Consensus 123 ------------------~~~~~-----~~~---------~~~~r~~~~------~~ad~~~~~s~~~~~~l~~~G~~~~ 164 (365)
T TIGR00236 123 ------------------GDRYS-----PMP---------EEINRQLTG------HIADLHFAPTEQAKDNLLRENVKAD 164 (365)
T ss_pred ------------------CCCCC-----CCc---------cHHHHHHHH------HHHHhccCCCHHHHHHHHHcCCCcc
Confidence 00000 000 000000000 1234444444333221101 11 12
Q ss_pred CcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHHHHhC-----CCCEEEEEcCCC
Q 012083 252 SIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELA-----GQPFLCGVRPGF 326 (471)
Q Consensus 252 ~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~ 326 (471)
+++.+|-...+............++.+-+. .+++.|+++++-.... ...+..+++++.++ +.++++...++
T Consensus 165 ~I~vign~~~d~~~~~~~~~~~~~~~~~~~--~~~~~vl~~~hr~~~~-~k~~~~ll~a~~~l~~~~~~~~~vi~~~~~- 240 (365)
T TIGR00236 165 SIFVTGNTVIDALLTNVEIAYSSPVLSEFG--EDKRYILLTLHRRENV-GEPLENIFKAIREIVEEFEDVQIVYPVHLN- 240 (365)
T ss_pred cEEEeCChHHHHHHHHHhhccchhHHHhcC--CCCCEEEEecCchhhh-hhHHHHHHHHHHHHHHHCCCCEEEEECCCC-
Confidence 456666443211000000000111112122 1234677665432111 13466677776553 34566554432
Q ss_pred CCCCCCCCCchhHHh--hCCCcEEEeccchh---hhhccCcceeeeeccCcchhhHhhhcCCceeecccccchhhhHHHH
Q 012083 327 INGSSTNNPDGLVAK--VADFGKMVKWAPQE---KVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCI 401 (471)
Q Consensus 327 ~~~~~~~lp~~~~~~--~~~nv~~~~~vpq~---~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v 401 (471)
......+.+. ..+++++.+.+++. .+++++++ +|+..|.. +.||+++|+|+|.++...+++. +
T Consensus 241 -----~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~ad~--vv~~Sg~~-~~EA~a~g~PvI~~~~~~~~~e----~ 308 (365)
T TIGR00236 241 -----PVVREPLHKHLGDSKRVHLIEPLEYLDFLNLAANSHL--ILTDSGGV-QEEAPSLGKPVLVLRDTTERPE----T 308 (365)
T ss_pred -----hHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhCCE--EEECChhH-HHHHHHcCCCEEECCCCCCChH----H
Confidence 0011112221 23578888766654 56766665 89877644 7999999999999876555542 3
Q ss_pred HhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHH
Q 012083 402 CDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKELAQKSVTKEGSSSKNLEYFI 466 (471)
Q Consensus 402 ~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~ 466 (471)
.+ .|.+..+. -+.++|.+++.++++|++.+++...-...+ .+|+++.+.++.+.
T Consensus 309 ~~-~g~~~lv~------~d~~~i~~ai~~ll~~~~~~~~~~~~~~~~----g~~~a~~ri~~~l~ 362 (365)
T TIGR00236 309 VE-AGTNKLVG------TDKENITKAAKRLLTDPDEYKKMSNASNPY----GDGEASERIVEELL 362 (365)
T ss_pred Hh-cCceEEeC------CCHHHHHHHHHHHHhChHHHHHhhhcCCCC----cCchHHHHHHHHHH
Confidence 34 37776653 278999999999999987776655433222 23555555554443
|
Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other. |
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.27 E-value=2.4e-09 Score=105.07 Aligned_cols=350 Identities=17% Similarity=0.045 Sum_probs=175.4
Q ss_pred EEEEEcCCC----cccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCCc
Q 012083 19 HVLLVSFPA----QGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDDR 94 (471)
Q Consensus 19 ~Il~~~~~~----~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 94 (471)
||+|++... .|+-..+..+++.|+++||+|++++.............. ......++.+..++.......
T Consensus 1 kIl~i~~~~~~~~~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~-- 73 (394)
T cd03794 1 KILILSQYFPPELGGGAFRTTELAEELVKRGHEVTVITGSPNYPSGKIYKGY-----KREEVDGVRVHRVPLPPYKKN-- 73 (394)
T ss_pred CEEEEecccCCccCCcceeHHHHHHHHHhCCceEEEEecCCCcccccccccc-----eEEecCCeEEEEEecCCCCcc--
Confidence 566666442 589999999999999999999999876544332210000 000123666655543222111
Q ss_pred ccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcc----hHHHHHHHcCCceEEEeCchHHHHHHHhchhh
Q 012083 95 KDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFG----WALQVAAKLELKKASIYTSAPGILAMIMNIPK 170 (471)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~----~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~ 170 (471)
..+...... ..........+.. .. .+||+|++..... .+..++...++|++.............
T Consensus 74 ~~~~~~~~~-~~~~~~~~~~~~~--~~----~~~D~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~----- 141 (394)
T cd03794 74 GLLKRLLNY-LSFALSALLALLK--RR----RRPDVIIATSPPLLIALAALLLARLKGAPFVLEVRDLWPESAVA----- 141 (394)
T ss_pred chHHHHHhh-hHHHHHHHHHHHh--cc----cCCCEEEEcCChHHHHHHHHHHHHhcCCCEEEEehhhcchhHHH-----
Confidence 111111111 1111111111111 12 8999999996222 334556667999988643211100000
Q ss_pred hhhhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHH-hhhccCcEEEEcchhhhchhh-hh
Q 012083 171 FIEAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIR-QNIEASDRILCTWFHELAPSA-NK 248 (471)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~s~~~l~~~~-~~ 248 (471)
. ..... ............ ..+..++.+++.+....+.-. ..
T Consensus 142 ---~-------------------------------~~~~~---~~~~~~~~~~~~~~~~~~~d~vi~~s~~~~~~~~~~~ 184 (394)
T cd03794 142 ---L-------------------------------GLLKN---GSLLYRLLRKLERLIYRRADAIVVISPGMREYLVRRG 184 (394)
T ss_pred ---c-------------------------------cCccc---cchHHHHHHHHHHHHHhcCCEEEEECHHHHHHHHhcC
Confidence 0 00000 000011111111 124678998888876655431 11
Q ss_pred h-CCCcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCcccc-CCHHHHHHHHHHHHhC-CCCEEEEEcCC
Q 012083 249 I-LPSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISK-LSQQQFNELALGLELA-GQPFLCGVRPG 325 (471)
Q Consensus 249 ~-~~~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~-~~~~~~~~~~~al~~~-~~~~i~~~~~~ 325 (471)
. ..++..+......... ............. ..+++.+++..|+... ...+.+...+..+.+. +.++++ ++..
T Consensus 185 ~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~--~~~~~~~i~~~G~~~~~k~~~~l~~~~~~l~~~~~~~l~i-~G~~ 259 (394)
T cd03794 185 VPPEKISVIPNGVDLELF--KPPPADESLRKEL--GLDDKFVVLYAGNIGRAQGLDTLLEAAALLKDRPDIRFLI-VGDG 259 (394)
T ss_pred CCcCceEEcCCCCCHHHc--CCccchhhhhhcc--CCCCcEEEEEecCcccccCHHHHHHHHHHHhhcCCeEEEE-eCCc
Confidence 1 2344444332221110 0000000000111 1223477777887633 2333344444444333 444443 3322
Q ss_pred CCCCCCCCCCchhH----HhhCCCcEEEeccchh---hhhccCcceeeeeccC---------cchhhHhhhcCCceeecc
Q 012083 326 FINGSSTNNPDGLV----AKVADFGKMVKWAPQE---KVLAHPSVACYLTHCG---------WNSTMEGISMGVPFLCWP 389 (471)
Q Consensus 326 ~~~~~~~~lp~~~~----~~~~~nv~~~~~vpq~---~lL~~~~~~~~ItHgG---------~~s~~eal~~GvP~l~~P 389 (471)
...+.+. ....+|+.+.+++++. .+++.+++ +|.... -+++.||+++|+|+|+.+
T Consensus 260 -------~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di--~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~ 330 (394)
T cd03794 260 -------PEKEELKELAKALGLDNVTFLGRVPKEELPELLAAADV--GLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASV 330 (394)
T ss_pred -------ccHHHHHHHHHHcCCCcEEEeCCCChHHHHHHHHhhCe--eEEeccCcccccccCchHHHHHHHCCCcEEEec
Confidence 1111221 1235788889999865 46766776 664322 234799999999999987
Q ss_pred cccchhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHHH
Q 012083 390 WGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKELA 448 (471)
Q Consensus 390 ~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~ 448 (471)
....+. .+.+ .+.|..++. -+.+++.++|.+++.|++.+++..+-+.+.
T Consensus 331 ~~~~~~----~~~~-~~~g~~~~~-----~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~ 379 (394)
T cd03794 331 DGESAE----LVEE-AGAGLVVPP-----GDPEALAAAILELLDDPEERAEMGENGRRY 379 (394)
T ss_pred CCCchh----hhcc-CCcceEeCC-----CCHHHHHHHHHHHHhChHHHHHHHHHHHHH
Confidence 765443 3344 367777753 378999999999999886665554444433
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. |
| >COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.26 E-value=4.7e-10 Score=99.51 Aligned_cols=296 Identities=16% Similarity=0.106 Sum_probs=184.6
Q ss_pred cEEEEEcCC----CcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCC
Q 012083 18 VHVLLVSFP----AQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDD 93 (471)
Q Consensus 18 ~~Il~~~~~----~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 93 (471)
|||+|.+-+ +.||+..++.||++|.++|..++|++.+...+.+.+.. +++.+.....
T Consensus 1 M~V~i~~Dgg~~iGmGHV~R~l~LA~~l~k~~~~~~fl~k~~~e~~~~~~~------------~~f~~~~~~~------- 61 (318)
T COG3980 1 MKVLIRCDGGLEIGMGHVMRTLTLARELEKRGFACLFLTKQDIEAIIHKVY------------EGFKVLEGRG------- 61 (318)
T ss_pred CcEEEEecCCcccCcchhhhHHHHHHHHHhcCceEEEecccchhhhhhhhh------------hhccceeeec-------
Confidence 589998866 67999999999999999999999999988666443211 1222211100
Q ss_pred cccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcch---HHHHHHHcCCceEEEeCchHHHHHHHhchhh
Q 012083 94 RKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGW---ALQVAAKLELKKASIYTSAPGILAMIMNIPK 170 (471)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~---~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~ 170 (471)
.. .+.+ .++|++|.|..... ...+..+.+.+.+.+-.-....+.
T Consensus 62 --------------~n-----~ik~-------~k~d~lI~Dsygl~~dd~k~ik~e~~~k~l~fDd~~~~~~~------- 108 (318)
T COG3980 62 --------------NN-----LIKE-------EKFDLLIFDSYGLNADDFKLIKEEAGSKILIFDDENAKSFK------- 108 (318)
T ss_pred --------------cc-----cccc-------ccCCEEEEeccCCCHHHHHHHHHHhCCcEEEecCCCccchh-------
Confidence 00 3344 89999999988773 356777899999997543322110
Q ss_pred hhhhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhchhhhhhC
Q 012083 171 FIEAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSANKIL 250 (471)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~ 250 (471)
..++.-+.... . +....+ .+
T Consensus 109 -----------------------------d~d~ivN~~~~----------------a---------~~~y~~------v~ 128 (318)
T COG3980 109 -----------------------------DNDLIVNAILN----------------A---------NDYYGL------VP 128 (318)
T ss_pred -----------------------------hhHhhhhhhhc----------------c---------hhhccc------cC
Confidence 00000000000 0 000000 01
Q ss_pred CCc-ceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCC
Q 012083 251 PSI-IPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELAGQPFLCGVRPGFING 329 (471)
Q Consensus 251 ~~~-~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~ 329 (471)
.+. ++.||-...-+. ......++ .-.+ +..-|+|++|- +.+.....+++..+.+..+.+-++++..
T Consensus 129 ~k~~~~lGp~y~~lr~--eF~~~r~~----~~~r-~~r~ilI~lGG--sDpk~lt~kvl~~L~~~~~nl~iV~gs~---- 195 (318)
T COG3980 129 NKTRYYLGPGYAPLRP--EFYALREE----NTER-PKRDILITLGG--SDPKNLTLKVLAELEQKNVNLHIVVGSS---- 195 (318)
T ss_pred cceEEEecCCceeccH--HHHHhHHH----Hhhc-chheEEEEccC--CChhhhHHHHHHHhhccCeeEEEEecCC----
Confidence 111 333333222110 00000000 0111 23479999994 5555567788888988887776777632
Q ss_pred CCCCCCchhHHhh--CCCcEEEeccchh-hhhccCcceeeeeccCcchhhHhhhcCCceeecccccchhhhHHHHHhhhc
Q 012083 330 SSTNNPDGLVAKV--ADFGKMVKWAPQE-KVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWK 406 (471)
Q Consensus 330 ~~~~lp~~~~~~~--~~nv~~~~~vpq~-~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G 406 (471)
..-..+..++. .+|..+......+ .++..+++ .|+-||. |+.|++.-|+|.+++|+...|.--|...+. +|
T Consensus 196 --~p~l~~l~k~~~~~~~i~~~~~~~dma~LMke~d~--aI~AaGs-tlyEa~~lgvP~l~l~~a~NQ~~~a~~f~~-lg 269 (318)
T COG3980 196 --NPTLKNLRKRAEKYPNINLYIDTNDMAELMKEADL--AISAAGS-TLYEALLLGVPSLVLPLAENQIATAKEFEA-LG 269 (318)
T ss_pred --CcchhHHHHHHhhCCCeeeEecchhHHHHHHhcch--heeccch-HHHHHHHhcCCceEEeeeccHHHHHHHHHh-cC
Confidence 12222333332 4566666555543 68866666 9998885 899999999999999999999999999999 68
Q ss_pred ceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHHH
Q 012083 407 IGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKELA 448 (471)
Q Consensus 407 ~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~ 448 (471)
+-..++ -.++++...-.+.++..|...|++.-.-++.+
T Consensus 270 ~~~~l~----~~l~~~~~~~~~~~i~~d~~~rk~l~~~~~~i 307 (318)
T COG3980 270 IIKQLG----YHLKDLAKDYEILQIQKDYARRKNLSFGSKLI 307 (318)
T ss_pred chhhcc----CCCchHHHHHHHHHhhhCHHHhhhhhhcccee
Confidence 888885 34788888889999999988887776555544
|
|
| >PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.26 E-value=5.7e-09 Score=104.49 Aligned_cols=94 Identities=14% Similarity=0.097 Sum_probs=65.8
Q ss_pred CcEEEeccch-hhhhccCcceeeeec-----cCcchhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeecCCCCCC
Q 012083 345 FGKMVKWAPQ-EKVLAHPSVACYLTH-----CGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGI 418 (471)
Q Consensus 345 nv~~~~~vpq-~~lL~~~~~~~~ItH-----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~ 418 (471)
++.+.+...+ ..+++.+++ ++.. +|..++.||+++|+|+|+-|...++......+.+ -|++....
T Consensus 303 ~v~l~~~~~el~~~y~~aDi--~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~-~g~~~~~~------ 373 (425)
T PRK05749 303 DVLLGDTMGELGLLYAIADI--AFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERLLQ-AGAAIQVE------ 373 (425)
T ss_pred cEEEEecHHHHHHHHHhCCE--EEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHHHH-CCCeEEEC------
Confidence 3444454443 357766665 3331 3444699999999999999988888877777766 37666642
Q ss_pred cCHhHHHHHHHHHhCcHHHHHHHHHHHHHH
Q 012083 419 IGRHEIKRKVDELLSNDVVRKNALKLKELA 448 (471)
Q Consensus 419 ~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~ 448 (471)
+.+++.+++.++++|++.+++..+-+...
T Consensus 374 -d~~~La~~l~~ll~~~~~~~~m~~~a~~~ 402 (425)
T PRK05749 374 -DAEDLAKAVTYLLTDPDARQAYGEAGVAF 402 (425)
T ss_pred -CHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 67999999999999987666555544443
|
|
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.25 E-value=3e-08 Score=96.00 Aligned_cols=325 Identities=12% Similarity=0.074 Sum_probs=171.9
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhh-hHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCCcccH
Q 012083 19 HVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICER-IKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDDRKDE 97 (471)
Q Consensus 19 ~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 97 (471)
||++++....|+...+..++++|.+.||+|++++....... ... .++.+..++..... ...
T Consensus 1 kIl~i~~~~~g~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~----~~~ 62 (359)
T cd03808 1 KILHIVTVDGGLYSFRLPLIKALRAAGYEVHVVAPPGDELEELEA--------------LGVKVIPIPLDRRG----INP 62 (359)
T ss_pred CeeEEEecchhHHHHHHHHHHHHHhcCCeeEEEecCCCccccccc--------------CCceEEeccccccc----cCh
Confidence 58888888888999999999999999999999998765542 221 26777666533211 111
Q ss_pred HHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcc--hHHHHHHHcCCceEEEeCchHHHHHHHhchhhhhhhC
Q 012083 98 AKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFG--WALQVAAKLELKKASIYTSAPGILAMIMNIPKFIEAG 175 (471)
Q Consensus 98 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~ 175 (471)
...+..+ ..+..+++. .+||+|++..... .+..++...+.|.+..........
T Consensus 63 ~~~~~~~-----~~~~~~~~~-------~~~dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------------- 117 (359)
T cd03808 63 FKDLKAL-----LRLYRLLRK-------ERPDIVHTHTPKPGILGRLAARLAGVPKVIYTVHGLGFV------------- 117 (359)
T ss_pred HhHHHHH-----HHHHHHHHh-------cCCCEEEEccccchhHHHHHHHHcCCCCEEEEecCcchh-------------
Confidence 1111111 123344444 8999999875433 334445546666555432211100
Q ss_pred CCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHH-hhhccCcEEEEcchhhhchhhhhhC---C
Q 012083 176 IISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIR-QNIEASDRILCTWFHELAPSANKIL---P 251 (471)
Q Consensus 176 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~s~~~l~~~~~~~~---~ 251 (471)
.. . ... ....+.... .....++.+++.+....+.-..... .
T Consensus 118 -----------------~~---------~-~~~--------~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~ 162 (359)
T cd03808 118 -----------------FT---------S-GGL--------KRRLYLLLERLALRFTDKVIFQNEDDRDLALKLGIIKKK 162 (359)
T ss_pred -----------------hc---------c-chh--------HHHHHHHHHHHHHhhccEEEEcCHHHHHHHHHhcCCCcC
Confidence 00 0 000 011111111 1235678888888766554312111 1
Q ss_pred CcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCcccc-CCHHHHHHHHHHHHh--CCCCEEEEEcCCCCC
Q 012083 252 SIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISK-LSQQQFNELALGLEL--AGQPFLCGVRPGFIN 328 (471)
Q Consensus 252 ~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~-~~~~~~~~~~~al~~--~~~~~i~~~~~~~~~ 328 (471)
....+.+...+.. ...+... . ..+++.+++..|+... ...+.+...+..+.+ .+.++++.-...
T Consensus 163 ~~~~~~~~~~~~~---~~~~~~~---~----~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~~~l~i~G~~~--- 229 (359)
T cd03808 163 KTVLIPGSGVDLD---RFSPSPE---P----IPEDDPVFLFVARLLKDKGIDELLEAARILKAKGPNVRLLLVGDGD--- 229 (359)
T ss_pred ceEEecCCCCChh---hcCcccc---c----cCCCCcEEEEEeccccccCHHHHHHHHHHHHhcCCCeEEEEEcCCC---
Confidence 2222222222211 0000000 0 1234577888887632 233334444444443 233444433322
Q ss_pred CCCCCCCchhHHh--hCCCcEEEeccchh-hhhccCcceeeeeccC----cchhhHhhhcCCceeecccccchhhhHHHH
Q 012083 329 GSSTNNPDGLVAK--VADFGKMVKWAPQE-KVLAHPSVACYLTHCG----WNSTMEGISMGVPFLCWPWGHDHLYIKSCI 401 (471)
Q Consensus 329 ~~~~~lp~~~~~~--~~~nv~~~~~vpq~-~lL~~~~~~~~ItHgG----~~s~~eal~~GvP~l~~P~~~DQ~~na~~v 401 (471)
............ ..+++.+.++..+. .+++.+++ +|..+. .+++.||+.+|+|+|+.+.. .+...+
T Consensus 230 -~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~adi--~i~ps~~e~~~~~~~Ea~~~G~Pvi~s~~~----~~~~~i 302 (359)
T cd03808 230 -EENPAAILEIEKLGLEGRVEFLGFRDDVPELLAAADV--FVLPSYREGLPRVLLEAMAMGRPVIATDVP----GCREAV 302 (359)
T ss_pred -cchhhHHHHHHhcCCcceEEEeeccccHHHHHHhccE--EEecCcccCcchHHHHHHHcCCCEEEecCC----Cchhhh
Confidence 000000000111 24677777775543 68877776 665433 67899999999999986543 344555
Q ss_pred HhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHH
Q 012083 402 CDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKEL 447 (471)
Q Consensus 402 ~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~ 447 (471)
.+ -+.|..++. -+.+++.++|.+++.|++..++..+-+.+
T Consensus 303 ~~-~~~g~~~~~-----~~~~~~~~~i~~l~~~~~~~~~~~~~~~~ 342 (359)
T cd03808 303 ID-GVNGFLVPP-----GDAEALADAIERLIEDPELRARMGQAARK 342 (359)
T ss_pred hc-CcceEEECC-----CCHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 55 377887753 36799999999999998655554444333
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. |
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.25 E-value=1e-08 Score=101.51 Aligned_cols=332 Identities=15% Similarity=0.129 Sum_probs=168.0
Q ss_pred CcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCCcccHHHHHHHHHh
Q 012083 27 AQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDDRKDEAKMTRSISK 106 (471)
Q Consensus 27 ~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (471)
..|.-..+..|++.|+++||+|++++........... ....++.+..++.................
T Consensus 20 ~GG~~~~~~~l~~~L~~~g~~V~v~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 85 (398)
T cd03800 20 TGGQNVYVLELARALARLGHEVDIFTRRIDDALPPIV----------ELAPGVRVVRVPAGPAEYLPKEELWPYLD---- 85 (398)
T ss_pred CCceeehHHHHHHHHhccCceEEEEEecCCcccCCcc----------ccccceEEEecccccccCCChhhcchhHH----
Confidence 3578889999999999999999999865432221101 11236676665432111100101111111
Q ss_pred hccHHHHHHHHHHhcccCCCCeeEEEECCCcc--hHHHHHHHcCCceEEEeCchHHHHHHHhchhhhhhhCCCCCCcccc
Q 012083 107 VMPGYLEELIQKINQQEEDEKITCVIADVTFG--WALQVAAKLELKKASIYTSAPGILAMIMNIPKFIEAGIISSDGIVI 184 (471)
Q Consensus 107 ~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 184 (471)
.....++..+.... .+||+|++..... .+..++..+++|+|.........
T Consensus 86 ---~~~~~~~~~~~~~~--~~~Div~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~----------------------- 137 (398)
T cd03800 86 ---EFADDLLRFLRREG--GRPDLIHAHYWDSGLVALLLARRLGIPLVHTFHSLGAV----------------------- 137 (398)
T ss_pred ---HHHHHHHHHHHhcC--CCccEEEEecCccchHHHHHHhhcCCceEEEeeccccc-----------------------
Confidence 11222333333311 2999999875433 45677889999988753311100
Q ss_pred cccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhchhhhhh---CCCcceeccccC
Q 012083 185 KNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSANKI---LPSIIPVGPLIA 261 (471)
Q Consensus 185 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~---~~~~~~vGp~~~ 261 (471)
...... . .... . ...........+..++.+++.+....+.-.... ..++..|.+...
T Consensus 138 ------~~~~~~-------~-~~~~----~--~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~~~vi~ng~~ 197 (398)
T cd03800 138 ------KRRHLG-------A-ADTY----E--PARRIEAEERLLRAADRVIASTPQEAEELYSLYGAYPRRIRVVPPGVD 197 (398)
T ss_pred ------CCcccc-------c-cccc----c--hhhhhhHHHHHHhhCCEEEEcCHHHHHHHHHHccccccccEEECCCCC
Confidence 000000 0 0000 0 000001112234678999888876543321111 122444433322
Q ss_pred CCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHHHHhC-----CCCEEEEEcCCCCCCCCCCCCc
Q 012083 262 NGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELA-----GQPFLCGVRPGFINGSSTNNPD 336 (471)
Q Consensus 262 ~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~~~~~~lp~ 336 (471)
.... ............+.... ...+++..|+.... ..+..+++++..+ +.++++..++. ....+.
T Consensus 198 ~~~~--~~~~~~~~~~~~~~~~~-~~~~i~~~gr~~~~--k~~~~ll~a~~~l~~~~~~~~l~i~G~~~-----~~~~~~ 267 (398)
T cd03800 198 LERF--TPYGRAEARRARLLRDP-DKPRILAVGRLDPR--KGIDTLIRAYAELPELRERANLVIVGGPR-----DDILAM 267 (398)
T ss_pred ccce--ecccchhhHHHhhccCC-CCcEEEEEcccccc--cCHHHHHHHHHHHHHhCCCeEEEEEECCC-----Ccchhh
Confidence 1110 00000000001111122 23666777876321 2233344444332 34555554432 011110
Q ss_pred ------hhHHh--hCCCcEEEeccchhh---hhccCcceeeeec----cCcchhhHhhhcCCceeecccccchhhhHHHH
Q 012083 337 ------GLVAK--VADFGKMVKWAPQEK---VLAHPSVACYLTH----CGWNSTMEGISMGVPFLCWPWGHDHLYIKSCI 401 (471)
Q Consensus 337 ------~~~~~--~~~nv~~~~~vpq~~---lL~~~~~~~~ItH----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v 401 (471)
.+.+. ..+|+.+.+|+|+.+ +++.+++ +++. |-..++.||+++|+|+|+.... .....+
T Consensus 268 ~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~adi--~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~----~~~e~i 341 (398)
T cd03800 268 DEEELRELARELGVIDRVDFPGRVSREDLPALYRAADV--FVNPALYEPFGLTALEAMACGLPVVATAVG----GPRDIV 341 (398)
T ss_pred hhHHHHHHHHhcCCCceEEEeccCCHHHHHHHHHhCCE--EEecccccccCcHHHHHHhcCCCEEECCCC----CHHHHc
Confidence 11111 246788899999764 5867666 7744 3246899999999999987543 345556
Q ss_pred HhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHH
Q 012083 402 CDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNAL 442 (471)
Q Consensus 402 ~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~ 442 (471)
.+ -+.|...+. -+.+++.++|.++++|++.+++..
T Consensus 342 ~~-~~~g~~~~~-----~~~~~l~~~i~~l~~~~~~~~~~~ 376 (398)
T cd03800 342 VD-GVTGLLVDP-----RDPEALAAALRRLLTDPALRRRLS 376 (398)
T ss_pred cC-CCCeEEeCC-----CCHHHHHHHHHHHHhCHHHHHHHH
Confidence 66 478888853 368999999999999875444333
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. |
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.1e-08 Score=101.91 Aligned_cols=336 Identities=13% Similarity=0.011 Sum_probs=166.9
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCCcc
Q 012083 16 TNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDDRK 95 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 95 (471)
++.+|++++....|+-..+..+|+.|+++||+|++++........+ . ....++.++.++..-.......
T Consensus 2 ~~~~~~~~~~~~~~~~~R~~~~a~~L~~~G~~V~ii~~~~~~~~~~-~----------~~~~~v~~~~~~~~~~~~~~~~ 70 (415)
T cd03816 2 KRKRVCVLVLGDIGRSPRMQYHALSLAKHGWKVDLVGYLETPPHDE-I----------LSNPNITIHPLPPPPQRLNKLP 70 (415)
T ss_pred CccEEEEEEecccCCCHHHHHHHHHHHhcCceEEEEEecCCCCCHH-H----------hcCCCEEEEECCCCccccccch
Confidence 4578888888888888899999999999999999998754321111 0 1123788887754210011111
Q ss_pred cHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcc-----hHHHHHHHcCCceEEEeCchHHHHHHHhchhh
Q 012083 96 DEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFG-----WALQVAAKLELKKASIYTSAPGILAMIMNIPK 170 (471)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~-----~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~ 170 (471)
....+...........+..++.. .+||+|++..... .+..++...++|+|..+...+... .
T Consensus 71 ~~~~~~~~~~~~~~~~~~~l~~~-------~~~Dvi~~~~~~~~~~~~~a~~~~~~~~~~~V~~~h~~~~~~-~------ 136 (415)
T cd03816 71 FLLFAPLKVLWQFFSLLWLLYKL-------RPADYILIQNPPSIPTLLIAWLYCLLRRTKLIIDWHNYGYTI-L------ 136 (415)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc-------CCCCEEEEeCCCCchHHHHHHHHHHHhCCeEEEEcCCchHHH-H------
Confidence 11111111111122222333333 7899999754221 234456678999987644321110 0
Q ss_pred hhhhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHh-h-hccCcEEEEcchhhhchhhh-
Q 012083 171 FIEAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQ-N-IEASDRILCTWFHELAPSAN- 247 (471)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~l~~s~~~l~~~~~- 247 (471)
. . ... . ...... +..+.+ . .+.+|.+++.|...-+.-..
T Consensus 137 --~------------------------~-------~~~-~---~~~~~~-~~~~~e~~~~~~ad~ii~vS~~~~~~l~~~ 178 (415)
T cd03816 137 --A------------------------L-------KLG-E---NHPLVR-LAKWYEKLFGRLADYNLCVTKAMKEDLQQF 178 (415)
T ss_pred --h------------------------c-------ccC-C---CCHHHH-HHHHHHHHHhhcCCEeeecCHHHHHHHHhh
Confidence 0 0 000 0 000011 111111 1 35688888888765433211
Q ss_pred hh-CCCcceeccccCCCCCCCCCCcCcchhcccc----------------cCCCCCcEEEEecCccccCCHHHHHHHHHH
Q 012083 248 KI-LPSIIPVGPLIANGQPTGNFWSEDLTCLSWL----------------DKQPPGSVIYAAFGSISKLSQQQFNELALG 310 (471)
Q Consensus 248 ~~-~~~~~~vGp~~~~~~~~~~~~~~~~~l~~~l----------------~~~~~~~vv~vs~GS~~~~~~~~~~~~~~a 310 (471)
.. ..++..|.... ...- .+.+....-..+. ...+++..++++.|.+.. ...+..+++|
T Consensus 179 ~~~~~ki~vI~Ng~-~~~f--~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~grl~~--~K~~~~li~A 253 (415)
T cd03816 179 NNWKIRATVLYDRP-PEQF--RPLPLEEKHELFLKLAKTFLTRELRIGAVQLSEERPALLVSSTSWTP--DEDFGILLDA 253 (415)
T ss_pred hccCCCeeecCCCC-HHHc--eeCcHHHHHHHHHhccccccccccccccceecCCCceEEEEeccccC--CCCHHHHHHH
Confidence 11 12332221100 0000 0000000000010 011234466666676532 2223344444
Q ss_pred HHhC-----------CCCEEEEEcCCCCCCCCCCCCchhHHh---h-CCCcEEE-eccchh---hhhccCcceeeee-c-
Q 012083 311 LELA-----------GQPFLCGVRPGFINGSSTNNPDGLVAK---V-ADFGKMV-KWAPQE---KVLAHPSVACYLT-H- 369 (471)
Q Consensus 311 l~~~-----------~~~~i~~~~~~~~~~~~~~lp~~~~~~---~-~~nv~~~-~~vpq~---~lL~~~~~~~~It-H- 369 (471)
+..+ +.+++ .+|++ ...+.+.+. . -+|+.+. +|+|.. .+|+.+++ +|. +
T Consensus 254 ~~~l~~~~~~~~~~~~i~l~-ivG~G-------~~~~~l~~~~~~~~l~~~~~~~g~~~~~~~~~~l~~aDv--~v~~~~ 323 (415)
T cd03816 254 LVAYEKSAATGPKLPKLLCI-ITGKG-------PLKEKYLERIKELKLKKVTIRTPWLSAEDYPKLLASADL--GVSLHT 323 (415)
T ss_pred HHHHHHhhcccccCCCEEEE-EEecC-------ccHHHHHHHHHHcCCCcEEEEcCcCCHHHHHHHHHhCCE--EEEccc
Confidence 4332 12333 33332 111222222 1 2456555 688855 46767777 553 1
Q ss_pred -----cCcchhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCc---HHHHHHH
Q 012083 370 -----CGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSN---DVVRKNA 441 (471)
Q Consensus 370 -----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~---~~~~~~a 441 (471)
|--+++.||+++|+|+|+... ......+++ -+.|..++ +.+++.++|.++++| ++.+++.
T Consensus 324 ~~~~~~~p~~~~Eama~G~PVI~s~~----~~~~eiv~~-~~~G~lv~-------d~~~la~~i~~ll~~~~~~~~~~~m 391 (415)
T cd03816 324 SSSGLDLPMKVVDMFGCGLPVCALDF----KCIDELVKH-GENGLVFG-------DSEELAEQLIDLLSNFPNRGKLNSL 391 (415)
T ss_pred cccccCCcHHHHHHHHcCCCEEEeCC----CCHHHHhcC-CCCEEEEC-------CHHHHHHHHHHHHhcCCCHHHHHHH
Confidence 123479999999999998643 345556666 36788772 689999999999998 6544333
|
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. |
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.23 E-value=1.8e-08 Score=98.96 Aligned_cols=89 Identities=13% Similarity=0.111 Sum_probs=62.8
Q ss_pred CCCcEEEeccchh-hhhccCcceeeeec----cCcchhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeecCCCCC
Q 012083 343 ADFGKMVKWAPQE-KVLAHPSVACYLTH----CGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNG 417 (471)
Q Consensus 343 ~~nv~~~~~vpq~-~lL~~~~~~~~ItH----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~ 417 (471)
.+++.+.++.++. .+++.+++ +|.- |.-.++.||+++|+|+|+.. ....+..+.+ -..|..++.
T Consensus 252 ~~~v~~~g~~~~~~~~~~~~d~--~v~ps~~E~~~~~~~EAma~g~PvI~s~----~~~~~e~i~~-~~~G~~~~~---- 320 (371)
T cd04962 252 QDDVLFLGKQDHVEELLSIADL--FLLPSEKESFGLAALEAMACGVPVVASN----AGGIPEVVKH-GETGFLVDV---- 320 (371)
T ss_pred CceEEEecCcccHHHHHHhcCE--EEeCCCcCCCccHHHHHHHcCCCEEEeC----CCCchhhhcC-CCceEEcCC----
Confidence 4678888887753 67866666 6632 34569999999999999864 3445555565 257777643
Q ss_pred CcCHhHHHHHHHHHhCcHHHHHHHHH
Q 012083 418 IIGRHEIKRKVDELLSNDVVRKNALK 443 (471)
Q Consensus 418 ~~~~~~l~~~i~~ll~~~~~~~~a~~ 443 (471)
-+.+++.+++.++++|++.+++.++
T Consensus 321 -~~~~~l~~~i~~l~~~~~~~~~~~~ 345 (371)
T cd04962 321 -GDVEAMAEYALSLLEDDELWQEFSR 345 (371)
T ss_pred -CCHHHHHHHHHHHHhCHHHHHHHHH
Confidence 3678999999999998765444333
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.23 E-value=1.4e-08 Score=100.53 Aligned_cols=88 Identities=15% Similarity=0.110 Sum_probs=62.2
Q ss_pred CCCcEEEeccchh---hhhccCcceeeeecc---C-cchhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeecCCC
Q 012083 343 ADFGKMVKWAPQE---KVLAHPSVACYLTHC---G-WNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDD 415 (471)
Q Consensus 343 ~~nv~~~~~vpq~---~lL~~~~~~~~ItHg---G-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~ 415 (471)
.+++.+.+++|+. .+++.+++ ++... | ..++.||+++|+|+|+.-.. .....+.. -+.|.....
T Consensus 279 ~~~V~f~g~~~~~~~~~~l~~ad~--~l~~s~~E~~g~~~lEAma~G~PvI~s~~~----~~~e~i~~-~~~g~~~~~-- 349 (392)
T cd03805 279 EDQVIFLPSISDSQKELLLSSARA--LLYTPSNEHFGIVPLEAMYAGKPVIACNSG----GPLETVVD-GETGFLCEP-- 349 (392)
T ss_pred CceEEEeCCCChHHHHHHHhhCeE--EEECCCcCCCCchHHHHHHcCCCEEEECCC----CcHHHhcc-CCceEEeCC--
Confidence 5788999999976 56776776 55321 1 35789999999999987432 33344555 366777632
Q ss_pred CCCcCHhHHHHHHHHHhCcHHHHHHHHH
Q 012083 416 NGIIGRHEIKRKVDELLSNDVVRKNALK 443 (471)
Q Consensus 416 ~~~~~~~~l~~~i~~ll~~~~~~~~a~~ 443 (471)
+.+++.++|.++++|++.+++..+
T Consensus 350 ----~~~~~a~~i~~l~~~~~~~~~~~~ 373 (392)
T cd03805 350 ----TPEEFAEAMLKLANDPDLADRMGA 373 (392)
T ss_pred ----CHHHHHHHHHHHHhChHHHHHHHH
Confidence 689999999999999865544433
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. |
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.23 E-value=2.5e-08 Score=97.30 Aligned_cols=83 Identities=16% Similarity=0.245 Sum_probs=61.6
Q ss_pred CCCcEEEeccchh---hhhccCcceeeeec----cCcchhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeecCCC
Q 012083 343 ADFGKMVKWAPQE---KVLAHPSVACYLTH----CGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDD 415 (471)
Q Consensus 343 ~~nv~~~~~vpq~---~lL~~~~~~~~ItH----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~ 415 (471)
.+|+.+.+++|+. .+++.+++ +|.. |..+++.||+++|+|+|+... ...+..+.+ .+.|..++.+
T Consensus 258 ~~~v~~~g~~~~~~~~~~~~~ad~--~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~----~~~~~~i~~-~~~g~~~~~~- 329 (374)
T cd03817 258 ADRVIFTGFVPREELPDYYKAADL--FVFASTTETQGLVLLEAMAAGLPVVAVDA----PGLPDLVAD-GENGFLFPPG- 329 (374)
T ss_pred CCcEEEeccCChHHHHHHHHHcCE--EEecccccCcChHHHHHHHcCCcEEEeCC----CChhhheec-CceeEEeCCC-
Confidence 5788899999976 46877777 6633 335789999999999998653 445566666 3788888641
Q ss_pred CCCcCHhHHHHHHHHHhCcHHHH
Q 012083 416 NGIIGRHEIKRKVDELLSNDVVR 438 (471)
Q Consensus 416 ~~~~~~~~l~~~i~~ll~~~~~~ 438 (471)
+. ++.+++.++++|++.+
T Consensus 330 ----~~-~~~~~i~~l~~~~~~~ 347 (374)
T cd03817 330 ----DE-ALAEALLRLLQDPELR 347 (374)
T ss_pred ----CH-HHHHHHHHHHhChHHH
Confidence 22 8999999999998643
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. |
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Probab=99.20 E-value=4.7e-08 Score=94.86 Aligned_cols=326 Identities=16% Similarity=0.111 Sum_probs=173.4
Q ss_pred EEEEEcCC---C-cccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCCc
Q 012083 19 HVLLVSFP---A-QGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDDR 94 (471)
Q Consensus 19 ~Il~~~~~---~-~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 94 (471)
||++++.. . .|+...+..+++.|.+.||+|++++............ ........ ... .
T Consensus 1 kI~ii~~~~~~~~~G~~~~~~~l~~~L~~~g~~v~i~~~~~~~~~~~~~~------------~~~~~~~~-----~~~-~ 62 (374)
T cd03801 1 KILLVTPEYPPSVGGAERHVLELARALAARGHEVTVLTPGDGGLPDEEEV------------GGIVVVRP-----PPL-L 62 (374)
T ss_pred CeeEEecccCCccCcHhHHHHHHHHHHHhcCceEEEEecCCCCCCceeee------------cCcceecC-----Ccc-c
Confidence 35555433 2 6889999999999999999999999876543322110 00000000 000 0
Q ss_pred ccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchHH--HHHHHcCCceEEEeCchHHHHHHHhchhhhh
Q 012083 95 KDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWAL--QVAAKLELKKASIYTSAPGILAMIMNIPKFI 172 (471)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~--~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~ 172 (471)
... ...........+..++.. .+||+|+......... ..+...++|++..........
T Consensus 63 -~~~--~~~~~~~~~~~~~~~~~~-------~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~---------- 122 (374)
T cd03801 63 -RVR--RLLLLLLLALRLRRLLRR-------ERFDVVHAHDWLALLAAALAARLLGIPLVLTVHGLEFGR---------- 122 (374)
T ss_pred -ccc--hhHHHHHHHHHHHHHhhh-------cCCcEEEEechhHHHHHHHHHHhcCCcEEEEeccchhhc----------
Confidence 000 000011112223344444 8999999987766433 478889999988653322100
Q ss_pred hhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHH-HHhhhccCcEEEEcchhhhchhhhhhC-
Q 012083 173 EAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINV-IRQNIEASDRILCTWFHELAPSANKIL- 250 (471)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~s~~~l~~~~~~~~- 250 (471)
.. .. .......... .......++.+++.+....+.-.....
T Consensus 123 -----------------------~~--------~~------~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~~~~ 165 (374)
T cd03801 123 -----------------------PG--------NE------LGLLLKLARALERRALRRADRIIAVSEATREELRELGGV 165 (374)
T ss_pred -----------------------cc--------cc------hhHHHHHHHHHHHHHHHhCCEEEEecHHHHHHHHhcCCC
Confidence 00 00 0001111111 122346889999888776654422222
Q ss_pred --CCcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHHHHhC-----CCCEEEEEc
Q 012083 251 --PSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELA-----GQPFLCGVR 323 (471)
Q Consensus 251 --~~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~-----~~~~i~~~~ 323 (471)
.++..+......... .+.......-... ...+.+++.+|+.. ....+..+++++... +.++++. +
T Consensus 166 ~~~~~~~i~~~~~~~~~----~~~~~~~~~~~~~-~~~~~~i~~~g~~~--~~k~~~~~i~~~~~~~~~~~~~~l~i~-G 237 (374)
T cd03801 166 PPEKITVIPNGVDTERF----RPAPRAARRRLGI-PEDEPVILFVGRLV--PRKGVDLLLEALAKLRKEYPDVRLVIV-G 237 (374)
T ss_pred CCCcEEEecCccccccc----CccchHHHhhcCC-cCCCeEEEEecchh--hhcCHHHHHHHHHHHhhhcCCeEEEEE-e
Confidence 245555433222110 0000000011111 22336667777753 222234444444332 2333333 3
Q ss_pred CCCCCCCCCCCCchhHH-----hhCCCcEEEeccchh---hhhccCcceeeee----ccCcchhhHhhhcCCceeecccc
Q 012083 324 PGFINGSSTNNPDGLVA-----KVADFGKMVKWAPQE---KVLAHPSVACYLT----HCGWNSTMEGISMGVPFLCWPWG 391 (471)
Q Consensus 324 ~~~~~~~~~~lp~~~~~-----~~~~nv~~~~~vpq~---~lL~~~~~~~~It----HgG~~s~~eal~~GvP~l~~P~~ 391 (471)
.. .....+.+ ...+++.+.+++++. .+++.+++ +|. -|..+++.||+++|+|+|+.+.
T Consensus 238 ~~-------~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di--~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~- 307 (374)
T cd03801 238 DG-------PLREELEALAAELGLGDRVTFLGFVPDEDLPALYAAADV--FVLPSLYEGFGLVLLEAMAAGLPVVASDV- 307 (374)
T ss_pred Cc-------HHHHHHHHHHHHhCCCcceEEEeccChhhHHHHHHhcCE--EEecchhccccchHHHHHHcCCcEEEeCC-
Confidence 22 11111111 136788899999754 57877666 663 3567799999999999998765
Q ss_pred cchhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHH
Q 012083 392 HDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKE 446 (471)
Q Consensus 392 ~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~ 446 (471)
......+.+ .+.|...+. .+.+++.+++.+++.|++.+++..+-+.
T Consensus 308 ---~~~~~~~~~-~~~g~~~~~-----~~~~~l~~~i~~~~~~~~~~~~~~~~~~ 353 (374)
T cd03801 308 ---GGIPEVVED-GETGLLVPP-----GDPEALAEAILRLLDDPELRRRLGEAAR 353 (374)
T ss_pred ---CChhHHhcC-CcceEEeCC-----CCHHHHHHHHHHHHcChHHHHHHHHHHH
Confidence 445666665 378888853 3589999999999999865554444433
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. |
| >cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) | Back alignment and domain information |
|---|
Probab=99.18 E-value=5.1e-10 Score=109.64 Aligned_cols=136 Identities=13% Similarity=0.102 Sum_probs=86.3
Q ss_pred CcEEEEecCccccC-CHHHHHHHHHHHHhCCCC-EEEEEcCCCCCCCCCCCCchhHH---hh---CCCcEEEeccchh--
Q 012083 286 GSVIYAAFGSISKL-SQQQFNELALGLELAGQP-FLCGVRPGFINGSSTNNPDGLVA---KV---ADFGKMVKWAPQE-- 355 (471)
Q Consensus 286 ~~vv~vs~GS~~~~-~~~~~~~~~~al~~~~~~-~i~~~~~~~~~~~~~~lp~~~~~---~~---~~nv~~~~~vpq~-- 355 (471)
++.|++++|..... ....+..+++++...... +.+..... ......+.+ +. .+|+.+.++.++.
T Consensus 198 ~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~~~~vi~~~~------~~~~~~l~~~~~~~~~~~~~v~~~~~~~~~~~ 271 (363)
T cd03786 198 KKYILVTLHRVENVDDGEQLEEILEALAELAEEDVPVVFPNH------PRTRPRIREAGLEFLGHHPNVLLISPLGYLYF 271 (363)
T ss_pred CCEEEEEeCCccccCChHHHHHHHHHHHHHHhcCCEEEEECC------CChHHHHHHHHHhhccCCCCEEEECCcCHHHH
Confidence 45788888875443 355677788887665432 44443322 011112222 11 3677777766544
Q ss_pred -hhhccCcceeeeeccCcchhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCc
Q 012083 356 -KVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSN 434 (471)
Q Consensus 356 -~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~ 434 (471)
.+++.+++ ||+..| |.+.||+.+|+|+|+++.. |. +..+.+ -|++..+.. +.++|.+++.++++|
T Consensus 272 ~~l~~~ad~--~v~~Sg-gi~~Ea~~~g~PvI~~~~~--~~--~~~~~~-~g~~~~~~~------~~~~i~~~i~~ll~~ 337 (363)
T cd03786 272 LLLLKNADL--VLTDSG-GIQEEASFLGVPVLNLRDR--TE--RPETVE-SGTNVLVGT------DPEAILAAIEKLLSD 337 (363)
T ss_pred HHHHHcCcE--EEEcCc-cHHhhhhhcCCCEEeeCCC--Cc--cchhhh-eeeEEecCC------CHHHHHHHHHHHhcC
Confidence 45755666 999999 7788999999999998643 22 334455 377766631 578999999999998
Q ss_pred HHHHHHH
Q 012083 435 DVVRKNA 441 (471)
Q Consensus 435 ~~~~~~a 441 (471)
+..+++.
T Consensus 338 ~~~~~~~ 344 (363)
T cd03786 338 EFAYSLM 344 (363)
T ss_pred chhhhcC
Confidence 7655544
|
The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st |
| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.8e-07 Score=93.29 Aligned_cols=90 Identities=11% Similarity=0.141 Sum_probs=60.8
Q ss_pred CCcEEEeccchh---hhhccCcceeeeeccCc------chhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeecCC
Q 012083 344 DFGKMVKWAPQE---KVLAHPSVACYLTHCGW------NSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPD 414 (471)
Q Consensus 344 ~nv~~~~~vpq~---~lL~~~~~~~~ItHgG~------~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~ 414 (471)
+|+.+.+|+|+. .+++.+++-++.+..+. +.+.|++++|+|+|+....+.. ....+ + +.|..++.
T Consensus 284 ~~v~f~G~~~~~~~~~~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~--~~~~i-~--~~G~~~~~- 357 (412)
T PRK10307 284 PNVHFLPLQPYDRLPALLKMADCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTE--LGQLV-E--GIGVCVEP- 357 (412)
T ss_pred CceEEeCCCCHHHHHHHHHhcCEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCch--HHHHH-h--CCcEEeCC-
Confidence 578889999865 47878887555555332 2368999999999998643311 11122 2 56777743
Q ss_pred CCCCcCHhHHHHHHHHHhCcHHHHHHHHH
Q 012083 415 DNGIIGRHEIKRKVDELLSNDVVRKNALK 443 (471)
Q Consensus 415 ~~~~~~~~~l~~~i~~ll~~~~~~~~a~~ 443 (471)
-+.+++.++|.++++|++.+++..+
T Consensus 358 ----~d~~~la~~i~~l~~~~~~~~~~~~ 382 (412)
T PRK10307 358 ----ESVEALVAAIAALARQALLRPKLGT 382 (412)
T ss_pred ----CCHHHHHHHHHHHHhCHHHHHHHHH
Confidence 3679999999999998755444333
|
|
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.14 E-value=5.5e-08 Score=95.03 Aligned_cols=87 Identities=13% Similarity=0.116 Sum_probs=61.3
Q ss_pred hCCCcEEEeccc-hh---hhhccCcceeeeecc----CcchhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeecC
Q 012083 342 VADFGKMVKWAP-QE---KVLAHPSVACYLTHC----GWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEP 413 (471)
Q Consensus 342 ~~~nv~~~~~vp-q~---~lL~~~~~~~~ItHg----G~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~ 413 (471)
...++.+.+|++ +. .+++.+++ +|... ..+++.||+++|+|+|+... ......+.. -+.|..++
T Consensus 242 ~~~~v~~~g~~~~~~~~~~~~~~ad~--~l~ps~~e~~g~~~~Eam~~g~PvI~~~~----~~~~e~~~~-~~~g~~~~- 313 (365)
T cd03825 242 LPFPVHYLGSLNDDESLALIYSAADV--FVVPSLQENFPNTAIEALACGTPVVAFDV----GGIPDIVDH-GVTGYLAK- 313 (365)
T ss_pred CCCceEecCCcCCHHHHHHHHHhCCE--EEeccccccccHHHHHHHhcCCCEEEecC----CCChhheeC-CCceEEeC-
Confidence 356778889998 43 46866666 77643 35799999999999998643 233334444 25677764
Q ss_pred CCCCCcCHhHHHHHHHHHhCcHHHHHH
Q 012083 414 DDNGIIGRHEIKRKVDELLSNDVVRKN 440 (471)
Q Consensus 414 ~~~~~~~~~~l~~~i~~ll~~~~~~~~ 440 (471)
..+.+++.+++.++++|++..++
T Consensus 314 ----~~~~~~~~~~l~~l~~~~~~~~~ 336 (365)
T cd03825 314 ----PGDPEDLAEGIEWLLADPDEREE 336 (365)
T ss_pred ----CCCHHHHHHHHHHHHhCHHHHHH
Confidence 34789999999999998864433
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. |
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.09 E-value=2.7e-07 Score=89.82 Aligned_cols=316 Identities=13% Similarity=0.048 Sum_probs=161.6
Q ss_pred CcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCC-CCcccHHHHHHHHH
Q 012083 27 AQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPE-DDRKDEAKMTRSIS 105 (471)
Q Consensus 27 ~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~ 105 (471)
..|+...+..+++.|.+.||+|++++............ ............... ............
T Consensus 13 ~~g~~~~~~~~~~~l~~~g~~v~v~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 78 (377)
T cd03798 13 NGGGGIFVKELARALAKRGVEVTVLAPGPWGPKLLDLL------------KGRLVGVERLPVLLPVVPLLKGPLLYLL-- 78 (377)
T ss_pred CchHHHHHHHHHHHHHHCCCceEEEecCCCCCCchhhc------------ccccccccccccCcchhhccccchhHHH--
Confidence 47888999999999999999999999876544332210 000000000000000 000000000111
Q ss_pred hhccHHHHHHHHHHhcccCCCCeeEEEECCCcc---hHHHHHHHcCCceEEEeCchHHHHHHHhchhhhhhhCCCCCCcc
Q 012083 106 KVMPGYLEELIQKINQQEEDEKITCVIADVTFG---WALQVAAKLELKKASIYTSAPGILAMIMNIPKFIEAGIISSDGI 182 (471)
Q Consensus 106 ~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~---~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 182 (471)
....+..++.. .. .+||+|++..... .+..++...++|++.........
T Consensus 79 --~~~~~~~~l~~-~~----~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~--------------------- 130 (377)
T cd03798 79 --AARALLKLLKL-KR----FRPDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVN--------------------- 130 (377)
T ss_pred --HHHHHHHHHhc-cc----CCCCEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhc---------------------
Confidence 11123333331 02 8999999885543 33456677888988754322110
Q ss_pred cccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhchhhhh--hCCCcceecccc
Q 012083 183 VIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSANK--ILPSIIPVGPLI 260 (471)
Q Consensus 183 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~--~~~~~~~vGp~~ 260 (471)
.... .. .... ........++.+++.+...-+.-... ...++..++...
T Consensus 131 -----------~~~~--------~~---------~~~~--~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~~i~~~~ 180 (377)
T cd03798 131 -----------LLPR--------KR---------LLRA--LLRRALRRADAVIAVSEALADELKALGIDPEKVTVIPNGV 180 (377)
T ss_pred -----------ccCc--------hh---------hHHH--HHHHHHhcCCeEEeCCHHHHHHHHHhcCCCCceEEcCCCc
Confidence 0000 00 0000 01122467888888887665543221 123455554333
Q ss_pred CCCCCCCCCCcCcchhcccccCCCCCcEEEEecCcccc-CCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCCchhH
Q 012083 261 ANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISK-LSQQQFNELALGLELAGQPFLCGVRPGFINGSSTNNPDGLV 339 (471)
Q Consensus 261 ~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~ 339 (471)
..... .+....-...+.. ...+.+++..|+... ...+.+-..+..+.+.+..+.+.+.+.. . ....+.
T Consensus 181 ~~~~~----~~~~~~~~~~~~~-~~~~~~i~~~g~~~~~k~~~~li~~~~~~~~~~~~~~l~i~g~~---~---~~~~~~ 249 (377)
T cd03798 181 DTERF----SPADRAEARKLGL-PEDKKVILFVGRLVPRKGIDYLIEALARLLKKRPDVHLVIVGDG---P---LREALE 249 (377)
T ss_pred CcccC----CCcchHHHHhccC-CCCceEEEEeccCccccCHHHHHHHHHHHHhcCCCeEEEEEcCC---c---chHHHH
Confidence 22110 0100000000111 123467777787543 2233333333344332223333332220 1 111111
Q ss_pred Hh-----hCCCcEEEeccchh---hhhccCcceeeee----ccCcchhhHhhhcCCceeecccccchhhhHHHHHhhhcc
Q 012083 340 AK-----VADFGKMVKWAPQE---KVLAHPSVACYLT----HCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKI 407 (471)
Q Consensus 340 ~~-----~~~nv~~~~~vpq~---~lL~~~~~~~~It----HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~ 407 (471)
+. ..+|+.+.+++++. .++..+++ +|. -|..+++.||+++|+|+|+.+.. .....+.. .+.
T Consensus 250 ~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~----~~~~~~~~-~~~ 322 (377)
T cd03798 250 ALAAELGLEDRVTFLGAVPHEEVPAYYAAADV--FVLPSLREGFGLVLLEAMACGLPVVATDVG----GIPEIITD-GEN 322 (377)
T ss_pred HHHHhcCCcceEEEeCCCCHHHHHHHHHhcCe--eecchhhccCChHHHHHHhcCCCEEEecCC----ChHHHhcC-Ccc
Confidence 11 25788889999975 56766666 552 35577899999999999986543 34455666 466
Q ss_pred eeeecCCCCCCcCHhHHHHHHHHHhCcHHH
Q 012083 408 GLWLEPDDNGIIGRHEIKRKVDELLSNDVV 437 (471)
Q Consensus 408 G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~ 437 (471)
|...+. -+.+++.+++.++++++..
T Consensus 323 g~~~~~-----~~~~~l~~~i~~~~~~~~~ 347 (377)
T cd03798 323 GLLVPP-----GDPEALAEAILRLLADPWL 347 (377)
T ss_pred eeEECC-----CCHHHHHHHHHHHhcCcHH
Confidence 777743 4789999999999999874
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. |
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.07 E-value=2.7e-07 Score=88.86 Aligned_cols=96 Identities=15% Similarity=0.170 Sum_probs=65.8
Q ss_pred CCCcEEEeccch-hhhhccCcceeeeecc----CcchhhHhhhcCCceeecccccchhhhHHHHHhhhc-ceeeecCCCC
Q 012083 343 ADFGKMVKWAPQ-EKVLAHPSVACYLTHC----GWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWK-IGLWLEPDDN 416 (471)
Q Consensus 343 ~~nv~~~~~vpq-~~lL~~~~~~~~ItHg----G~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G-~G~~~~~~~~ 416 (471)
..++.+.++... ..+++.+++ +|... .-+++.||+++|+|+|+.+....+ ..+.+ -| .|..++.
T Consensus 234 ~~~v~~~g~~~~~~~~~~~ad~--~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~----~~~~~-~~~~g~~~~~--- 303 (348)
T cd03820 234 EDRVILLGFTKNIEEYYAKASI--FVLTSRFEGFPMVLLEAMAFGLPVISFDCPTGP----SEIIE-DGVNGLLVPN--- 303 (348)
T ss_pred CCeEEEcCCcchHHHHHHhCCE--EEeCccccccCHHHHHHHHcCCCEEEecCCCch----Hhhhc-cCcceEEeCC---
Confidence 456666676443 368876666 66554 257899999999999987544333 23344 25 7887753
Q ss_pred CCcCHhHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Q 012083 417 GIIGRHEIKRKVDELLSNDVVRKNALKLKELAQK 450 (471)
Q Consensus 417 ~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~ 450 (471)
-+.+++.++|.++++|++.+++..+-+..+.+
T Consensus 304 --~~~~~~~~~i~~ll~~~~~~~~~~~~~~~~~~ 335 (348)
T cd03820 304 --GDVEALAEALLRLMEDEELRKRMGANARESAE 335 (348)
T ss_pred --CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence 46799999999999999877666665544443
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. |
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.07 E-value=9.5e-08 Score=93.04 Aligned_cols=139 Identities=15% Similarity=0.157 Sum_probs=86.2
Q ss_pred cEEEEecCccccCCHHHHHHHHHHHHhCC-CCEEEEEcCCCCCCCCCCCCchhHH-----hhCCCcEEEeccchh---hh
Q 012083 287 SVIYAAFGSISKLSQQQFNELALGLELAG-QPFLCGVRPGFINGSSTNNPDGLVA-----KVADFGKMVKWAPQE---KV 357 (471)
Q Consensus 287 ~vv~vs~GS~~~~~~~~~~~~~~al~~~~-~~~i~~~~~~~~~~~~~~lp~~~~~-----~~~~nv~~~~~vpq~---~l 357 (471)
..+++..|+... ...+..+++++.+.. .++++.-.+. ....+.+ ...+||.+.+|+|+. .+
T Consensus 191 ~~~i~~~G~~~~--~K~~~~li~a~~~l~~~~l~i~G~g~--------~~~~~~~~~~~~~~~~~V~~~g~v~~~~~~~~ 260 (357)
T cd03795 191 RPFFLFVGRLVY--YKGLDVLLEAAAALPDAPLVIVGEGP--------LEAELEALAAALGLLDRVRFLGRLDDEEKAAL 260 (357)
T ss_pred CcEEEEeccccc--ccCHHHHHHHHHhccCcEEEEEeCCh--------hHHHHHHHHHhcCCcceEEEcCCCCHHHHHHH
Confidence 366677777532 234556777777666 4444443221 1111111 135789999999975 57
Q ss_pred hccCcceeeee---ccC-cchhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhC
Q 012083 358 LAHPSVACYLT---HCG-WNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLS 433 (471)
Q Consensus 358 L~~~~~~~~It---HgG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~ 433 (471)
++.+++-++.+ +.| ..++.||+++|+|+|+............ .. +.|...+. -+.+++.++|.++++
T Consensus 261 ~~~ad~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~---~~-~~g~~~~~-----~d~~~~~~~i~~l~~ 331 (357)
T cd03795 261 LAACDVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNL---HG-VTGLVVPP-----GDPAALAEAIRRLLE 331 (357)
T ss_pred HHhCCEEEeCCcccccccchHHHHHHHcCCCEEecCCCCchhHHhh---CC-CceEEeCC-----CCHHHHHHHHHHHHH
Confidence 76677633333 234 3479999999999999765544432222 22 67777743 378999999999999
Q ss_pred cHHHHHHHHHH
Q 012083 434 NDVVRKNALKL 444 (471)
Q Consensus 434 ~~~~~~~a~~l 444 (471)
|++.+++.++-
T Consensus 332 ~~~~~~~~~~~ 342 (357)
T cd03795 332 DPELRERLGEA 342 (357)
T ss_pred CHHHHHHHHHH
Confidence 98655444433
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.07 E-value=4e-07 Score=90.59 Aligned_cols=93 Identities=18% Similarity=0.145 Sum_probs=66.1
Q ss_pred CCCcEEEeccchh---hhhccCcceeeee---c-cCcchhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeecCCC
Q 012083 343 ADFGKMVKWAPQE---KVLAHPSVACYLT---H-CGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDD 415 (471)
Q Consensus 343 ~~nv~~~~~vpq~---~lL~~~~~~~~It---H-gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~ 415 (471)
.+++.+.+++|+. .+++.+++ +|. + |...++.||+++|+|+|+.... .....+.+ -+.|..++.
T Consensus 282 ~~~v~~~g~~~~~~~~~~l~~ad~--~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~----~~~e~i~~-~~~g~~~~~-- 352 (405)
T TIGR03449 282 ADRVRFLPPRPPEELVHVYRAADV--VAVPSYNESFGLVAMEAQACGTPVVAARVG----GLPVAVAD-GETGLLVDG-- 352 (405)
T ss_pred CceEEECCCCCHHHHHHHHHhCCE--EEECCCCCCcChHHHHHHHcCCCEEEecCC----CcHhhhcc-CCceEECCC--
Confidence 4678899999864 57877776 653 2 3345899999999999987543 34445555 367877743
Q ss_pred CCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHH
Q 012083 416 NGIIGRHEIKRKVDELLSNDVVRKNALKLKEL 447 (471)
Q Consensus 416 ~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~ 447 (471)
-+.+++.++|.++++|++.++++.+-+..
T Consensus 353 ---~d~~~la~~i~~~l~~~~~~~~~~~~~~~ 381 (405)
T TIGR03449 353 ---HDPADWADALARLLDDPRTRIRMGAAAVE 381 (405)
T ss_pred ---CCHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 37799999999999998665555444443
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. |
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.03 E-value=6.9e-07 Score=87.07 Aligned_cols=92 Identities=12% Similarity=-0.017 Sum_probs=63.1
Q ss_pred CCCcEEEeccchh---hhhccCcceeeeecc----CcchhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeecCCC
Q 012083 343 ADFGKMVKWAPQE---KVLAHPSVACYLTHC----GWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDD 415 (471)
Q Consensus 343 ~~nv~~~~~vpq~---~lL~~~~~~~~ItHg----G~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~ 415 (471)
.+++.+.+|+++. .+++.+++ +|.-. -.+++.||+++|+|+|+.+.. .....+.. +.|...+.
T Consensus 261 ~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~PvI~~~~~----~~~~~~~~--~~~~~~~~-- 330 (375)
T cd03821 261 EDRVTFTGMLYGEDKAAALADADL--FVLPSHSENFGIVVAEALACGTPVVTTDKV----PWQELIEY--GCGWVVDD-- 330 (375)
T ss_pred cceEEEcCCCChHHHHHHHhhCCE--EEeccccCCCCcHHHHHHhcCCCEEEcCCC----CHHHHhhc--CceEEeCC--
Confidence 5788889999964 45777776 55432 256899999999999997543 23333333 67776642
Q ss_pred CCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHHH
Q 012083 416 NGIIGRHEIKRKVDELLSNDVVRKNALKLKELA 448 (471)
Q Consensus 416 ~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~ 448 (471)
+.+++.++|.++++|++.+++..+-+.+.
T Consensus 331 ----~~~~~~~~i~~l~~~~~~~~~~~~~~~~~ 359 (375)
T cd03821 331 ----DVDALAAALRRALELPQRLKAMGENGRAL 359 (375)
T ss_pred ----ChHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 34999999999999975555444444443
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. |
| >PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length | Back alignment and domain information |
|---|
Probab=99.02 E-value=3.2e-07 Score=86.96 Aligned_cols=300 Identities=13% Similarity=0.065 Sum_probs=156.9
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcc--hhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCCcc
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFI--CERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDDRK 95 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 95 (471)
|||+|--.. .-|+.-+-.+.++|.++||+|.+.+-... .+.+... |+.+..+..- ..
T Consensus 1 MkIwiDi~~-p~hvhfFk~~I~eL~~~GheV~it~R~~~~~~~LL~~y--------------g~~y~~iG~~------g~ 59 (335)
T PF04007_consen 1 MKIWIDITH-PAHVHFFKNIIRELEKRGHEVLITARDKDETEELLDLY--------------GIDYIVIGKH------GD 59 (335)
T ss_pred CeEEEECCC-chHHHHHHHHHHHHHhCCCEEEEEEeccchHHHHHHHc--------------CCCeEEEcCC------CC
Confidence 588776643 34999999999999999999999877543 2333333 8888877531 12
Q ss_pred cHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEEEeCchHHHHHHHhchhhhhhhC
Q 012083 96 DEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKASIYTSAPGILAMIMNIPKFIEAG 175 (471)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~ 175 (471)
+....+...... ..++++.+.+ .+||++|+- .+..+..+|.-+|+|+|.+.-+..........
T Consensus 60 ~~~~Kl~~~~~R----~~~l~~~~~~----~~pDv~is~-~s~~a~~va~~lgiP~I~f~D~e~a~~~~~Lt-------- 122 (335)
T PF04007_consen 60 SLYGKLLESIER----QYKLLKLIKK----FKPDVAISF-GSPEAARVAFGLGIPSIVFNDTEHAIAQNRLT-------- 122 (335)
T ss_pred CHHHHHHHHHHH----HHHHHHHHHh----hCCCEEEec-CcHHHHHHHHHhCCCeEEEecCchhhccceee--------
Confidence 333322222222 2333343333 899999964 55678889999999999987654332110000
Q ss_pred CCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEE-EcchhhhchhhhhhCCCcc
Q 012083 176 IISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRIL-CTWFHELAPSANKILPSII 254 (471)
Q Consensus 176 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~s~~~l~~~~~~~~~~~~ 254 (471)
+|..... ..|. .. .. ..+.+ .-.+ +.+. ++...++-
T Consensus 123 ------~Pla~~i--~~P~------------~~-----~~---~~~~~---~G~~-~~i~~y~G~~E~a----------- 159 (335)
T PF04007_consen 123 ------LPLADVI--ITPE------------AI-----PK---EFLKR---FGAK-NQIRTYNGYKELA----------- 159 (335)
T ss_pred ------hhcCCee--ECCc------------cc-----CH---HHHHh---cCCc-CCEEEECCeeeEE-----------
Confidence 0000000 0000 00 00 00000 0001 1122 33332222
Q ss_pred eeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccc----cCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCC
Q 012083 255 PVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSIS----KLSQQQFNELALGLELAGQPFLCGVRPGFINGS 330 (471)
Q Consensus 255 ~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~----~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~ 330 (471)
++-|+ .++.+..+-+.. .+.+.|++=+-+.. ......+..+++.+++.+..+|+..+..
T Consensus 160 yl~~F-----------~Pd~~vl~~lg~-~~~~yIvvR~~~~~A~y~~~~~~i~~~ii~~L~~~~~~vV~ipr~~----- 222 (335)
T PF04007_consen 160 YLHPF-----------KPDPEVLKELGL-DDEPYIVVRPEAWKASYDNGKKSILPEIIEELEKYGRNVVIIPRYE----- 222 (335)
T ss_pred eecCC-----------CCChhHHHHcCC-CCCCEEEEEeccccCeeecCccchHHHHHHHHHhhCceEEEecCCc-----
Confidence 11111 122222233331 23457777666542 1233456778999988887644333322
Q ss_pred CCCCCchhHHhhCCCcEEE-eccchhhhhccCcceeeeeccCcchhhHhhhcCCceeecccccchhhhHHHHHhhhccee
Q 012083 331 STNNPDGLVAKVADFGKMV-KWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGL 409 (471)
Q Consensus 331 ~~~lp~~~~~~~~~nv~~~-~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~ 409 (471)
..++.+ ++. ++.+. .-+.-..+|.++++ +|+-|| ....||...|+|.+.+ +.++-...-+.+.+ .|+
T Consensus 223 --~~~~~~-~~~--~~~i~~~~vd~~~Ll~~a~l--~Ig~gg-TMa~EAA~LGtPaIs~-~~g~~~~vd~~L~~-~Gl-- 290 (335)
T PF04007_consen 223 --DQRELF-EKY--GVIIPPEPVDGLDLLYYADL--VIGGGG-TMAREAALLGTPAISC-FPGKLLAVDKYLIE-KGL-- 290 (335)
T ss_pred --chhhHH-hcc--CccccCCCCCHHHHHHhcCE--EEeCCc-HHHHHHHHhCCCEEEe-cCCcchhHHHHHHH-CCC--
Confidence 111111 111 13222 33444579988887 999888 7788999999999975 22232223344566 466
Q ss_pred eecCCCCCCcCHhHHHHHHHHHh
Q 012083 410 WLEPDDNGIIGRHEIKRKVDELL 432 (471)
Q Consensus 410 ~~~~~~~~~~~~~~l~~~i~~ll 432 (471)
.. ..-+.+++.+.+++.+
T Consensus 291 l~-----~~~~~~ei~~~v~~~~ 308 (335)
T PF04007_consen 291 LY-----HSTDPDEIVEYVRKNL 308 (335)
T ss_pred eE-----ecCCHHHHHHHHHHhh
Confidence 22 2236677777555544
|
They are found in archaea and some bacteria and have no known function. |
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=99.00 E-value=9.5e-07 Score=94.27 Aligned_cols=379 Identities=11% Similarity=0.057 Sum_probs=194.1
Q ss_pred CCcEEEEEcCC---------------CcccHHHHHHHHHHHHhCC--CeEEEEeCCcchhhhHH-hhhcC--CC------
Q 012083 16 TNVHVLLVSFP---------------AQGHVASLMKLAHRLADCR--IKVTFVTTEFICERIKE-SRQLG--SF------ 69 (471)
Q Consensus 16 ~~~~Il~~~~~---------------~~GH~~p~~~La~~L~~rG--h~Vt~~~~~~~~~~~~~-~~~~~--~~------ 69 (471)
++|.|++++.. +.|+..=.+.||++|+++| |+|.++|-....+.+.. .+.+. ..
T Consensus 168 ~~~~I~liS~HG~~~~~~~elg~~~DtGGq~vYV~ELAraLa~~~gv~~Vdl~TR~~~~~~~~~~y~~p~e~~~~~~~~~ 247 (1050)
T TIGR02468 168 KKLYIVLISLHGLVRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDWSYGEPTEMLTPRSSEN 247 (1050)
T ss_pred CceEEEEEccccCccccCcccCCCCCCCChHHHHHHHHHHHHhCCCCCEEEEEeCCcCccccccccCCcccccccccccc
Confidence 57888887643 2356666789999999998 89999987654322100 00000 00
Q ss_pred C-ccCCCCCCeEEEeCCCCCCCC-CCcccHHHHHHHHHhhccHHHHH----HHHHHhc-ccCCCCeeEEEECCCcc--hH
Q 012083 70 S-EMGDAQQLVRIVPLPDGLEPE-DDRKDEAKMTRSISKVMPGYLEE----LIQKINQ-QEEDEKITCVIADVTFG--WA 140 (471)
Q Consensus 70 ~-~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~----ll~~l~~-~~~~~~pD~vV~D~~~~--~~ 140 (471)
. ......+|++++-+|.+.... -....++.++..|.+.+...+.+ +.+++.. .. ..||+|-+..... .+
T Consensus 248 ~~~~~~~~~g~rIvRip~GP~~~~l~Ke~L~~~l~ef~d~~l~~~~~~~~~~~~~~~~~~~--~~pDvIHaHyw~sG~aa 325 (1050)
T TIGR02468 248 DGDEMGESSGAYIIRIPFGPRDKYIPKEELWPYIPEFVDGALSHIVNMSKVLGEQIGSGHP--VWPYVIHGHYADAGDSA 325 (1050)
T ss_pred ccccccCCCCeEEEEeccCCCCCCcCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccC--CCCCEEEECcchHHHHH
Confidence 0 000123588888887664432 22334566666665555554433 2233211 11 3599999876544 67
Q ss_pred HHHHHHcCCceEEEeCchHHHHHHHhchhhhhhhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHH
Q 012083 141 LQVAAKLELKKASIYTSAPGILAMIMNIPKFIEAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQY 220 (471)
Q Consensus 141 ~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (471)
..+++.+|||+|.+..+....-.... .. .+.. ...... ... .....
T Consensus 326 ~~L~~~lgVP~V~T~HSLgr~K~~~l-----l~-------------------~g~~--~~~~~~-~~y-------~~~~R 371 (1050)
T TIGR02468 326 ALLSGALNVPMVLTGHSLGRDKLEQL-----LK-------------------QGRM--SKEEIN-STY-------KIMRR 371 (1050)
T ss_pred HHHHHhhCCCEEEECccchhhhhhhh-----cc-------------------cccc--cccccc-ccc-------chHHH
Confidence 78999999999987655322100000 00 0000 000000 000 00011
Q ss_pred HHHHHhhhccCcEEEEcchhhhchhhhhh-------------------------CCCcceeccccCCCCCCC--------
Q 012083 221 INVIRQNIEASDRILCTWFHELAPSANKI-------------------------LPSIIPVGPLIANGQPTG-------- 267 (471)
Q Consensus 221 ~~~~~~~~~~~~~~l~~s~~~l~~~~~~~-------------------------~~~~~~vGp~~~~~~~~~-------- 267 (471)
+.-....+..++.++.+|..+-+....-+ .+++..|.|-........
T Consensus 372 i~~Ee~~l~~Ad~VIasT~qE~~eq~~lY~~~~~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~ 451 (1050)
T TIGR02468 372 IEAEELSLDASEIVITSTRQEIEEQWGLYDGFDVILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGE 451 (1050)
T ss_pred HHHHHHHHHhcCEEEEeCHHHHHHHHHHhccCCchhhhhhhhhhcccccccccCCCCeEEeCCCCcHHHccCCCccccch
Confidence 11112235789999999988775321110 123333333221110000
Q ss_pred ---------C-CCcCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHHHHhCC-----CCEEEEEcCCCCCCCCC
Q 012083 268 ---------N-FWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELAG-----QPFLCGVRPGFINGSST 332 (471)
Q Consensus 268 ---------~-~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~-----~~~i~~~~~~~~~~~~~ 332 (471)
. ..+.+.++..|+.. +++ .++++.|.+.. ...+..+++|+..+. ..+.+.++... ...
T Consensus 452 ~~~~~~~~~~~~~~~~~~l~r~~~~-pdk-pvIL~VGRL~p--~KGi~~LIeAf~~L~~l~~~~nL~LIiG~gd---d~d 524 (1050)
T TIGR02468 452 TEGNEEHPAKPDPPIWSEIMRFFTN-PRK-PMILALARPDP--KKNITTLVKAFGECRPLRELANLTLIMGNRD---DID 524 (1050)
T ss_pred hcccccccccccchhhHHHHhhccc-CCC-cEEEEEcCCcc--ccCHHHHHHHHHHhHhhccCCCEEEEEecCc---hhh
Confidence 0 00112345556644 333 45555676422 223455666665432 23434444320 000
Q ss_pred CCC-------c---hhHHh--hCCCcEEEeccchhh---hhccCc--ceeeeec---cC-cchhhHhhhcCCceeecccc
Q 012083 333 NNP-------D---GLVAK--VADFGKMVKWAPQEK---VLAHPS--VACYLTH---CG-WNSTMEGISMGVPFLCWPWG 391 (471)
Q Consensus 333 ~lp-------~---~~~~~--~~~nv~~~~~vpq~~---lL~~~~--~~~~ItH---gG-~~s~~eal~~GvP~l~~P~~ 391 (471)
.+. . .+.++ +.++|.+.+++++.+ +++.++ .++||.- =| -.++.||+++|+|+|+....
T Consensus 525 ~l~~~~~~~l~~L~~li~~lgL~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvG 604 (1050)
T TIGR02468 525 EMSSGSSSVLTSVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNG 604 (1050)
T ss_pred hhhccchHHHHHHHHHHHHhCCCCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCC
Confidence 000 0 11122 247788889988764 454342 2347764 23 45899999999999998643
Q ss_pred cchhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHH
Q 012083 392 HDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKEL 447 (471)
Q Consensus 392 ~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~ 447 (471)
+ ....+.. -.-|..+++ -+.++|+++|.++++|++.+++..+-+.+
T Consensus 605 G----~~EII~~-g~nGlLVdP-----~D~eaLA~AL~~LL~Dpelr~~m~~~gr~ 650 (1050)
T TIGR02468 605 G----PVDIHRV-LDNGLLVDP-----HDQQAIADALLKLVADKQLWAECRQNGLK 650 (1050)
T ss_pred C----cHHHhcc-CCcEEEECC-----CCHHHHHHHHHHHhhCHHHHHHHHHHHHH
Confidence 2 2233344 246777754 47899999999999998766555544433
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=98.97 E-value=4.8e-07 Score=88.59 Aligned_cols=89 Identities=16% Similarity=0.174 Sum_probs=65.7
Q ss_pred CCCcEEEeccchh---hhhccCcceeeeec----------cCcchhhHhhhcCCceeecccccchhhhHHHHHhhhccee
Q 012083 343 ADFGKMVKWAPQE---KVLAHPSVACYLTH----------CGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGL 409 (471)
Q Consensus 343 ~~nv~~~~~vpq~---~lL~~~~~~~~ItH----------gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~ 409 (471)
.+++.+.+++|+. .+++.+++ +|.. |-.+++.||+++|+|+|+.+.. .++..+.+ -+.|.
T Consensus 244 ~~~v~~~g~~~~~~l~~~~~~ad~--~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~----~~~e~i~~-~~~g~ 316 (367)
T cd05844 244 GGRVTFLGAQPHAEVRELMRRARI--FLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHG----GIPEAVED-GETGL 316 (367)
T ss_pred CCeEEECCCCCHHHHHHHHHhCCE--EEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCC----Cchhheec-CCeeE
Confidence 5778888999865 45877776 5542 2357899999999999987653 35566666 47888
Q ss_pred eecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHH
Q 012083 410 WLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALK 443 (471)
Q Consensus 410 ~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~ 443 (471)
.++. -+.+++.++|.++++|++.+++..+
T Consensus 317 ~~~~-----~d~~~l~~~i~~l~~~~~~~~~~~~ 345 (367)
T cd05844 317 LVPE-----GDVAALAAALGRLLADPDLRARMGA 345 (367)
T ss_pred EECC-----CCHHHHHHHHHHHHcCHHHHHHHHH
Confidence 8853 4679999999999999865544433
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.97 E-value=1.4e-07 Score=91.05 Aligned_cols=130 Identities=12% Similarity=0.081 Sum_probs=78.0
Q ss_pred EEEEecCccccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCCchhHHh--hCCCcEEEeccchh---hhhccCc
Q 012083 288 VIYAAFGSISKLSQQQFNELALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAK--VADFGKMVKWAPQE---KVLAHPS 362 (471)
Q Consensus 288 vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~--~~~nv~~~~~vpq~---~lL~~~~ 362 (471)
.+.+..|... .......+++++++.+.++++.-.+. ....+.....+. ..+++.+.+++++. .+++..+
T Consensus 172 ~~i~~~Gr~~--~~Kg~~~li~~~~~~~~~l~i~G~~~----~~~~~~~~~~~~~~~~~~v~~~G~~~~~~~~~~~~~~d 245 (335)
T cd03802 172 DYLLFLGRIS--PEKGPHLAIRAARRAGIPLKLAGPVS----DPDYFYREIAPELLDGPDIEYLGEVGGAEKAELLGNAR 245 (335)
T ss_pred CEEEEEEeec--cccCHHHHHHHHHhcCCeEEEEeCCC----CHHHHHHHHHHhcccCCcEEEeCCCCHHHHHHHHHhCc
Confidence 3445557652 22234557777887887776554432 000010111111 25788999999975 4677777
Q ss_pred ceeeee--ccC-cchhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcH
Q 012083 363 VACYLT--HCG-WNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSND 435 (471)
Q Consensus 363 ~~~~It--HgG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~ 435 (471)
+-++-+ +-| ..++.||+++|+|+|+.... .+...+.. -..|..++ . .+++.+++.+++..+
T Consensus 246 ~~v~ps~~~E~~~~~~lEAma~G~PvI~~~~~----~~~e~i~~-~~~g~l~~----~---~~~l~~~l~~l~~~~ 309 (335)
T cd03802 246 ALLFPILWEEPFGLVMIEAMACGTPVIAFRRG----AVPEVVED-GVTGFLVD----S---VEELAAAVARADRLD 309 (335)
T ss_pred EEEeCCcccCCcchHHHHHHhcCCCEEEeCCC----CchhheeC-CCcEEEeC----C---HHHHHHHHHHHhccH
Confidence 633323 233 45899999999999987543 33344444 13677663 2 899999999987654
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. |
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.93 E-value=1.3e-06 Score=85.14 Aligned_cols=91 Identities=19% Similarity=0.284 Sum_probs=63.3
Q ss_pred CCCcEEE-eccchh---hhhccCcceeeee--c----cCcchhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeec
Q 012083 343 ADFGKMV-KWAPQE---KVLAHPSVACYLT--H----CGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLE 412 (471)
Q Consensus 343 ~~nv~~~-~~vpq~---~lL~~~~~~~~It--H----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~ 412 (471)
.+++.+. +|+|+. .+++.+++ +|. + |..+++.||+++|+|+|+.+... ...+.. -+.|..+.
T Consensus 246 ~~~v~~~~~~~~~~~~~~~~~~ad~--~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-----~~~i~~-~~~g~~~~ 317 (366)
T cd03822 246 ADRVIFINRYLPDEELPELFSAADV--VVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-----AEEVLD-GGTGLLVP 317 (366)
T ss_pred CCcEEEecCcCCHHHHHHHHhhcCE--EEecccccccccchHHHHHHHcCCCEEecCCCC-----hheeee-CCCcEEEc
Confidence 5778877 458864 67866666 553 2 34568999999999999987544 233445 37788775
Q ss_pred CCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHH
Q 012083 413 PDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKE 446 (471)
Q Consensus 413 ~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~ 446 (471)
. -+.+++.+++.++++|++.+++..+-+.
T Consensus 318 ~-----~d~~~~~~~l~~l~~~~~~~~~~~~~~~ 346 (366)
T cd03822 318 P-----GDPAALAEAIRRLLADPELAQALRARAR 346 (366)
T ss_pred C-----CCHHHHHHHHHHHHcChHHHHHHHHHHH
Confidence 3 3579999999999999765544443333
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. |
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.92 E-value=5.6e-07 Score=86.72 Aligned_cols=319 Identities=17% Similarity=0.120 Sum_probs=162.9
Q ss_pred EEEEEcCC--CcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCCccc
Q 012083 19 HVLLVSFP--AQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDDRKD 96 (471)
Q Consensus 19 ~Il~~~~~--~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 96 (471)
||+++... ..|+-..+..++++|.+.||+|++++............ ........ ..... ....
T Consensus 1 kIl~~~~~~~~gG~~~~~~~l~~~l~~~g~~v~v~~~~~~~~~~~~~~------------~~~~~~~~--~~~~~-~~~~ 65 (353)
T cd03811 1 KILFVIPSLGGGGAERVLLNLANGLDKRGYDVTLVVLRDEGDYLELLP------------SNVKLIPV--RVLKL-KSLR 65 (353)
T ss_pred CeEEEeecccCCCcchhHHHHHHHHHhcCceEEEEEcCCCCccccccc------------cchhhhce--eeeec-cccc
Confidence 46666544 57888899999999999999999998866543322110 00000000 00000 0000
Q ss_pred HHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCC-cc-hHHHHHHHcCCceEEEeCchHHHHHHHhchhhhhhh
Q 012083 97 EAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVT-FG-WALQVAAKLELKKASIYTSAPGILAMIMNIPKFIEA 174 (471)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~-~~-~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~ 174 (471)
.. .....+.+++.. .+||+|++... .. ....++..+++|++............
T Consensus 66 ~~--------~~~~~~~~~~~~-------~~~dii~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~---------- 120 (353)
T cd03811 66 DL--------LAILRLRRLLRK-------EKPDVVISHLTTTPNVLALLAARLGTKLIVWEHNSLSLELK---------- 120 (353)
T ss_pred ch--------hHHHHHHHHHHh-------cCCCEEEEcCccchhHHHHHHhhcCCceEEEEcCcchhhhc----------
Confidence 00 011224455555 89999999876 22 23334444478988865433221000
Q ss_pred CCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhchhhhhhC---C
Q 012083 175 GIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSANKIL---P 251 (471)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~---~ 251 (471)
... . .. .........++.+++.+....+.-..... .
T Consensus 121 -------------------------------~~~-----~---~~--~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~ 159 (353)
T cd03811 121 -------------------------------RKL-----R---LL--LLIRKLYRRADKIVAVSEGVKEDLLKLLGIPPD 159 (353)
T ss_pred -------------------------------cch-----h---HH--HHHHhhccccceEEEeccchhhhHHHhhcCCcc
Confidence 000 0 00 11122246778888777665443312222 3
Q ss_pred CcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHHHHhC-----CCCEEEEEcCCC
Q 012083 252 SIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELA-----GQPFLCGVRPGF 326 (471)
Q Consensus 252 ~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~ 326 (471)
++..+......... .+.... .......+++.+++..|+... ...+..+++++..+ +.++++.-.+.
T Consensus 160 ~~~vi~~~~~~~~~----~~~~~~--~~~~~~~~~~~~i~~~g~~~~--~k~~~~~i~~~~~l~~~~~~~~l~i~G~~~- 230 (353)
T cd03811 160 KIEVIYNPIDIEEI----RALAEE--PLELGIPPDGPVILAVGRLSP--QKGFDTLIRAFALLRKEGPDARLVILGDGP- 230 (353)
T ss_pred ccEEecCCcChhhc----Ccccch--hhhcCCCCCceEEEEEecchh--hcChHHHHHHHHHhhhcCCCceEEEEcCCc-
Confidence 44555433322110 000000 000011223477777887642 22233444444332 33444432221
Q ss_pred CCCCCCCCCchhHHh--hCCCcEEEeccchh-hhhccCcceeeeec----cCcchhhHhhhcCCceeecccccchhhhHH
Q 012083 327 INGSSTNNPDGLVAK--VADFGKMVKWAPQE-KVLAHPSVACYLTH----CGWNSTMEGISMGVPFLCWPWGHDHLYIKS 399 (471)
Q Consensus 327 ~~~~~~~lp~~~~~~--~~~nv~~~~~vpq~-~lL~~~~~~~~ItH----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~ 399 (471)
....+ ....++ ..+++.+.++.+.. .+++.+++ +|.- |..+++.||+++|+|+|+.... ....
T Consensus 231 ---~~~~~-~~~~~~~~~~~~v~~~g~~~~~~~~~~~~d~--~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~----~~~e 300 (353)
T cd03811 231 ---LREEL-EALAKELGLADRVHFLGFQSNPYPYLKAADL--FVLSSRYEGFPNVLLEAMALGTPVVATDCP----GPRE 300 (353)
T ss_pred ---cHHHH-HHHHHhcCCCccEEEecccCCHHHHHHhCCE--EEeCcccCCCCcHHHHHHHhCCCEEEcCCC----ChHH
Confidence 00000 011111 24678888887754 68877776 5532 3457899999999999986443 5556
Q ss_pred HHHhhhcceeeecCCCCCCcCHhHH---HHHHHHHhCcHHHHHHHHH
Q 012083 400 CICDDWKIGLWLEPDDNGIIGRHEI---KRKVDELLSNDVVRKNALK 443 (471)
Q Consensus 400 ~v~~~~G~G~~~~~~~~~~~~~~~l---~~~i~~ll~~~~~~~~a~~ 443 (471)
.+.+ -+.|...+. -+.+.+ .+++..++.+++.+++++.
T Consensus 301 ~i~~-~~~g~~~~~-----~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 341 (353)
T cd03811 301 ILED-GENGLLVPV-----GDEAALAAAALALLDLLLDPELRERLAA 341 (353)
T ss_pred HhcC-CCceEEECC-----CCHHHHHHHHHHHHhccCChHHHHHHHH
Confidence 6677 478888854 355566 7778888888765555555
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. |
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.91 E-value=2e-06 Score=85.42 Aligned_cols=79 Identities=23% Similarity=0.263 Sum_probs=54.5
Q ss_pred CCCcEEEeccchh---hhhccCcceeeeec---cCc-chhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeecCCC
Q 012083 343 ADFGKMVKWAPQE---KVLAHPSVACYLTH---CGW-NSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDD 415 (471)
Q Consensus 343 ~~nv~~~~~vpq~---~lL~~~~~~~~ItH---gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~ 415 (471)
.+++.+.+|+|+. .+++.+++ +|.- -|. .++.||+++|+|+|+.+..+ ....+.+ |.+....
T Consensus 249 ~~~v~~~G~~~~~~~~~~l~~ad~--~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg----~~e~i~~--~~~~~~~--- 317 (398)
T cd03796 249 QDRVELLGAVPHERVRDVLVQGHI--FLNTSLTEAFCIAIVEAASCGLLVVSTRVGG----IPEVLPP--DMILLAE--- 317 (398)
T ss_pred CCeEEEeCCCCHHHHHHHHHhCCE--EEeCChhhccCHHHHHHHHcCCCEEECCCCC----chhheeC--CceeecC---
Confidence 4678889999864 57766776 6542 243 49999999999999876542 2233333 4443332
Q ss_pred CCCcCHhHHHHHHHHHhCcH
Q 012083 416 NGIIGRHEIKRKVDELLSND 435 (471)
Q Consensus 416 ~~~~~~~~l~~~i~~ll~~~ 435 (471)
. +.+++.+++.+++.+.
T Consensus 318 -~--~~~~l~~~l~~~l~~~ 334 (398)
T cd03796 318 -P--DVESIVRKLEEAISIL 334 (398)
T ss_pred -C--CHHHHHHHHHHHHhCh
Confidence 2 6799999999999864
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. |
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Probab=98.89 E-value=4.6e-06 Score=83.82 Aligned_cols=89 Identities=13% Similarity=0.104 Sum_probs=61.7
Q ss_pred CCCcEEEeccchhhh---hccC--cceeeeecc---C-cchhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeecC
Q 012083 343 ADFGKMVKWAPQEKV---LAHP--SVACYLTHC---G-WNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEP 413 (471)
Q Consensus 343 ~~nv~~~~~vpq~~l---L~~~--~~~~~ItHg---G-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~ 413 (471)
.++|.+.+++++.++ ++.+ ++++||... | -.+++||+++|+|+|+... ......+.. -..|..+++
T Consensus 316 ~~~V~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~----gg~~eiv~~-~~~G~lv~~ 390 (439)
T TIGR02472 316 YGKVAYPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACGLPIVATDD----GGPRDIIAN-CRNGLLVDV 390 (439)
T ss_pred CceEEecCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhCCCEEEeCC----CCcHHHhcC-CCcEEEeCC
Confidence 577888888887643 5433 224477643 3 4699999999999998854 334444555 246877754
Q ss_pred CCCCCcCHhHHHHHHHHHhCcHHHHHHH
Q 012083 414 DDNGIIGRHEIKRKVDELLSNDVVRKNA 441 (471)
Q Consensus 414 ~~~~~~~~~~l~~~i~~ll~~~~~~~~a 441 (471)
-+.+++.++|.++++|++.+++.
T Consensus 391 -----~d~~~la~~i~~ll~~~~~~~~~ 413 (439)
T TIGR02472 391 -----LDLEAIASALEDALSDSSQWQLW 413 (439)
T ss_pred -----CCHHHHHHHHHHHHhCHHHHHHH
Confidence 47799999999999998654443
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. |
| >PRK14089 ipid-A-disaccharide synthase; Provisional | Back alignment and domain information |
|---|
Probab=98.88 E-value=3.4e-07 Score=87.52 Aligned_cols=148 Identities=11% Similarity=0.050 Sum_probs=88.6
Q ss_pred CcEEEEecCccccCCHHHHHHHHHHHHhCCCC-EEEEEcCCCCCCCCCCCCchhHHhhCC--CcEEEeccchhhhhccCc
Q 012083 286 GSVIYAAFGSISKLSQQQFNELALGLELAGQP-FLCGVRPGFINGSSTNNPDGLVAKVAD--FGKMVKWAPQEKVLAHPS 362 (471)
Q Consensus 286 ~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~-~i~~~~~~~~~~~~~~lp~~~~~~~~~--nv~~~~~vpq~~lL~~~~ 362 (471)
+++|.+--||..+--...+..+.++...+..+ ..+.+... ... +.+.+...+ .+.+.+ .-.++++.++
T Consensus 167 ~~~I~llPGSR~~Ei~~llP~~~~aa~~L~~~~~~~~i~~a------~~~-~~i~~~~~~~~~~~~~~--~~~~~m~~aD 237 (347)
T PRK14089 167 EGTIAFMPGSRKSEIKRLMPIFKELAKKLEGKEKILVVPSF------FKG-KDLKEIYGDISEFEISY--DTHKALLEAE 237 (347)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCcEEEEeCC------CcH-HHHHHHHhcCCCcEEec--cHHHHHHhhh
Confidence 35899999996443334455455555444322 22222221 001 222222221 222332 2246887677
Q ss_pred ceeeeeccCcchhhHhhhcCCceeeccc--ccchhhhHHHHH---hhhcceeeecC---------C-CCCCcCHhHHHHH
Q 012083 363 VACYLTHCGWNSTMEGISMGVPFLCWPW--GHDHLYIKSCIC---DDWKIGLWLEP---------D-DNGIIGRHEIKRK 427 (471)
Q Consensus 363 ~~~~ItHgG~~s~~eal~~GvP~l~~P~--~~DQ~~na~~v~---~~~G~G~~~~~---------~-~~~~~~~~~l~~~ 427 (471)
+ +|+-+|..|+ |+..+|+||++ ++ ..-|..||+++. . .|+.-.+.. + ..+..|++.|.++
T Consensus 238 l--al~~SGT~TL-E~al~g~P~Vv-~Yk~~~lty~iak~lv~~~~-igL~Nii~~~~~~~~vvPEllQ~~~t~~~la~~ 312 (347)
T PRK14089 238 F--AFICSGTATL-EAALIGTPFVL-AYKAKAIDYFIAKMFVKLKH-IGLANIFFDFLGKEPLHPELLQEFVTVENLLKA 312 (347)
T ss_pred H--HHhcCcHHHH-HHHHhCCCEEE-EEeCCHHHHHHHHHHHcCCe-eehHHHhcCCCcccccCchhhcccCCHHHHHHH
Confidence 6 9999999999 99999999988 55 346889999999 6 476665521 0 1366899999999
Q ss_pred HHHHhCcHHHHHHHHHHHHHHHHHh
Q 012083 428 VDELLSNDVVRKNALKLKELAQKSV 452 (471)
Q Consensus 428 i~~ll~~~~~~~~a~~l~~~~~~~~ 452 (471)
+.+ + .+++.++..+.+++..
T Consensus 313 i~~-~----~~~~~~~~~~~l~~~l 332 (347)
T PRK14089 313 YKE-M----DREKFFKKSKELREYL 332 (347)
T ss_pred HHH-H----HHHHHHHHHHHHHHHh
Confidence 988 2 3444555555555443
|
|
| >PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.87 E-value=9.7e-07 Score=86.31 Aligned_cols=134 Identities=18% Similarity=0.187 Sum_probs=78.7
Q ss_pred cEEEEecCccccCCHHHHHHHHHHHHhCCCCE-EEEEcCCCCCCCCCCCCchhHHh--hCCCcEEEeccch--h---hhh
Q 012083 287 SVIYAAFGSISKLSQQQFNELALGLELAGQPF-LCGVRPGFINGSSTNNPDGLVAK--VADFGKMVKWAPQ--E---KVL 358 (471)
Q Consensus 287 ~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~-i~~~~~~~~~~~~~~lp~~~~~~--~~~nv~~~~~vpq--~---~lL 358 (471)
+.+++..|.+.......+..+++++.+....+ ++.++... ..+.+ ....+. .++++.+.+|+++ . ..+
T Consensus 180 ~~~i~~~Grl~~~~~k~~~~l~~a~~~~~~~~~l~ivG~g~---~~~~l-~~~~~~~~l~~~v~f~G~~~~~~~~~~~~~ 255 (359)
T PRK09922 180 PAVFLYVGRLKFEGQKNVKELFDGLSQTTGEWQLHIIGDGS---DFEKC-KAYSRELGIEQRIIWHGWQSQPWEVVQQKI 255 (359)
T ss_pred CcEEEEEEEEecccCcCHHHHHHHHHhhCCCeEEEEEeCCc---cHHHH-HHHHHHcCCCCeEEEecccCCcHHHHHHHH
Confidence 35667777764323334566777776553332 23333220 00111 111111 2578888898854 2 234
Q ss_pred ccCcceeeeec----cCcchhhHhhhcCCceeecc-cccchhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhC
Q 012083 359 AHPSVACYLTH----CGWNSTMEGISMGVPFLCWP-WGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLS 433 (471)
Q Consensus 359 ~~~~~~~~ItH----gG~~s~~eal~~GvP~l~~P-~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~ 433 (471)
+..++ +|.. |--+++.||+++|+|+|+.- ..+ ....+.. -..|..+++ -+.+++.++|.++++
T Consensus 256 ~~~d~--~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g----~~eiv~~-~~~G~lv~~-----~d~~~la~~i~~l~~ 323 (359)
T PRK09922 256 KNVSA--LLLTSKFEGFPMTLLEAMSYGIPCISSDCMSG----PRDIIKP-GLNGELYTP-----GNIDEFVGKLNKVIS 323 (359)
T ss_pred hcCcE--EEECCcccCcChHHHHHHHcCCCEEEeCCCCC----hHHHccC-CCceEEECC-----CCHHHHHHHHHHHHh
Confidence 33444 6643 33679999999999999874 322 2234444 256777743 488999999999999
Q ss_pred cHH
Q 012083 434 NDV 436 (471)
Q Consensus 434 ~~~ 436 (471)
|++
T Consensus 324 ~~~ 326 (359)
T PRK09922 324 GEV 326 (359)
T ss_pred Ccc
Confidence 986
|
|
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.86 E-value=3.9e-06 Score=81.75 Aligned_cols=88 Identities=13% Similarity=0.001 Sum_probs=60.6
Q ss_pred CCCcEEEeccch-hhhhccCcceeeeec----cCcchhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeecCCCCC
Q 012083 343 ADFGKMVKWAPQ-EKVLAHPSVACYLTH----CGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNG 417 (471)
Q Consensus 343 ~~nv~~~~~vpq-~~lL~~~~~~~~ItH----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~ 417 (471)
.+++.+.++..+ ..+++.+++ +|.- |-.++++||+++|+|+|+....+ ....+.. +.|.....
T Consensus 248 ~~~v~~~g~~~~~~~~~~~adi--~v~ps~~E~~~~~~lEAma~G~PvI~s~~~~----~~~~i~~--~~~~~~~~---- 315 (358)
T cd03812 248 EDKVIFLGVRNDVPELLQAMDV--FLFPSLYEGLPLVLIEAQASGLPCILSDTIT----KEVDLTD--LVKFLSLD---- 315 (358)
T ss_pred CCcEEEecccCCHHHHHHhcCE--EEecccccCCCHHHHHHHHhCCCEEEEcCCc----hhhhhcc--CccEEeCC----
Confidence 467888887544 368876766 5543 45679999999999999875443 3333333 45555432
Q ss_pred CcCHhHHHHHHHHHhCcHHHHHHHHH
Q 012083 418 IIGRHEIKRKVDELLSNDVVRKNALK 443 (471)
Q Consensus 418 ~~~~~~l~~~i~~ll~~~~~~~~a~~ 443 (471)
-+.+++.++|.++++|++.+++...
T Consensus 316 -~~~~~~a~~i~~l~~~~~~~~~~~~ 340 (358)
T cd03812 316 -ESPEIWAEEILKLKSEDRRERSSES 340 (358)
T ss_pred -CCHHHHHHHHHHHHhCcchhhhhhh
Confidence 2579999999999999876655433
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). |
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.86 E-value=1.1e-05 Score=78.54 Aligned_cols=308 Identities=14% Similarity=0.061 Sum_probs=156.3
Q ss_pred CcccHHHHHHHHHHHHhCCCeEEEEeCCcchh-hhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCCcccHHHHHHHHH
Q 012083 27 AQGHVASLMKLAHRLADCRIKVTFVTTEFICE-RIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDDRKDEAKMTRSIS 105 (471)
Q Consensus 27 ~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (471)
..|--..+..||++|+++||+|++++...... ..... +++++.++..- ......+..
T Consensus 9 ~gG~e~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~--------------~~~~~~~~~~~------~~~~~~~~~-- 66 (355)
T cd03819 9 SGGVERGTLELARALVERGHRSLVASAGGRLVAELEAE--------------GSRHIKLPFIS------KNPLRILLN-- 66 (355)
T ss_pred cCcHHHHHHHHHHHHHHcCCEEEEEcCCCchHHHHHhc--------------CCeEEEccccc------cchhhhHHH--
Confidence 46677778999999999999999998754322 22222 66666553211 011111111
Q ss_pred hhccHHHHHHHHHHhcccCCCCeeEEEECCCcc--hHHHHHHHcCCceEEEeCchHHHHHHHhchhhhhhhCCCCCCccc
Q 012083 106 KVMPGYLEELIQKINQQEEDEKITCVIADVTFG--WALQVAAKLELKKASIYTSAPGILAMIMNIPKFIEAGIISSDGIV 183 (471)
Q Consensus 106 ~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 183 (471)
...+..++.+ .+||+|++..... .+..++..+++|++..........
T Consensus 67 ---~~~l~~~~~~-------~~~dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~--------------------- 115 (355)
T cd03819 67 ---VARLRRLIRE-------EKVDIVHARSRAPAWSAYLAARRTRPPFVTTVHGFYSVN--------------------- 115 (355)
T ss_pred ---HHHHHHHHHH-------cCCCEEEECCCchhHHHHHHHHhcCCCEEEEeCCchhhH---------------------
Confidence 1123334444 8999999876433 344566788999887543221100
Q ss_pred ccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhchhhhhh--C-CCcceecccc
Q 012083 184 IKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSANKI--L-PSIIPVGPLI 260 (471)
Q Consensus 184 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~--~-~~~~~vGp~~ 260 (471)
. ... ....+++.+++.+....+.-...+ + .++..++.-.
T Consensus 116 ----------------------~----------~~~------~~~~~~~~vi~~s~~~~~~~~~~~~~~~~k~~~i~ngi 157 (355)
T cd03819 116 ----------------------F----------RYN------AIMARGDRVIAVSNFIADHIRENYGVDPDRIRVIPRGV 157 (355)
T ss_pred ----------------------H----------HHH------HHHHhcCEEEEeCHHHHHHHHHhcCCChhhEEEecCCc
Confidence 0 000 112356777776654443321111 1 2344443222
Q ss_pred CCCCCCCCCCcCcch---hcccccCCCCCcEEEEecCcccc-CCHHHHHHHHHHHHhC--CCCEEEEEcCCCCCCCCCCC
Q 012083 261 ANGQPTGNFWSEDLT---CLSWLDKQPPGSVIYAAFGSISK-LSQQQFNELALGLELA--GQPFLCGVRPGFINGSSTNN 334 (471)
Q Consensus 261 ~~~~~~~~~~~~~~~---l~~~l~~~~~~~vv~vs~GS~~~-~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~~l 334 (471)
...... .......+ +.+-+.. ++...+++..|+... ...+.+...+..+.+. +.+++++-.+. ....+
T Consensus 158 ~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~~~~~~l~ivG~~~----~~~~~ 231 (355)
T cd03819 158 DLDRFD-PGAVPPERILALAREWPL-PKGKPVILLPGRLTRWKGQEVFIEALARLKKDDPDVHLLIVGDAQ----GRRFY 231 (355)
T ss_pred cccccC-ccccchHHHHHHHHHcCC-CCCceEEEEeeccccccCHHHHHHHHHHHHhcCCCeEEEEEECCc----ccchH
Confidence 111100 00000000 0011111 223466777777643 2344455555555543 33444333222 00111
Q ss_pred Cchh---HH--hhCCCcEEEeccch-hhhhccCcceeeeec--cC-cchhhHhhhcCCceeecccccchhhhHHHHHhhh
Q 012083 335 PDGL---VA--KVADFGKMVKWAPQ-EKVLAHPSVACYLTH--CG-WNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDW 405 (471)
Q Consensus 335 p~~~---~~--~~~~nv~~~~~vpq-~~lL~~~~~~~~ItH--gG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~ 405 (471)
...+ .+ ...+++.+.+|... ..+++.+++-++-++ -| .++++||+++|+|+|+... ......+.. -
T Consensus 232 ~~~~~~~~~~~~~~~~v~~~g~~~~~~~~l~~ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~----~~~~e~i~~-~ 306 (355)
T cd03819 232 YAELLELIKRLGLQDRVTFVGHCSDMPAAYALADIVVSASTEPEAFGRTAVEAQAMGRPVIASDH----GGARETVRP-G 306 (355)
T ss_pred HHHHHHHHHHcCCcceEEEcCCcccHHHHHHhCCEEEecCCCCCCCchHHHHHHhcCCCEEEcCC----CCcHHHHhC-C
Confidence 1111 11 12467888888553 367877777333331 23 4699999999999988643 334445555 2
Q ss_pred cceeeecCCCCCCcCHhHHHHHHHHHhC-cHHHHHHH
Q 012083 406 KIGLWLEPDDNGIIGRHEIKRKVDELLS-NDVVRKNA 441 (471)
Q Consensus 406 G~G~~~~~~~~~~~~~~~l~~~i~~ll~-~~~~~~~a 441 (471)
+.|..++. -+.+++.++|..++. +++.+++.
T Consensus 307 ~~g~~~~~-----~~~~~l~~~i~~~~~~~~~~~~~~ 338 (355)
T cd03819 307 ETGLLVPP-----GDAEALAQALDQILSLLPEGRAKM 338 (355)
T ss_pred CceEEeCC-----CCHHHHHHHHHHHHhhCHHHHHHH
Confidence 57888753 478999999965554 55444333
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. |
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Probab=98.84 E-value=4.8e-06 Score=80.97 Aligned_cols=87 Identities=20% Similarity=0.282 Sum_probs=62.4
Q ss_pred CCCcEEEeccchh---hhhccCcceeeee----------ccCcchhhHhhhcCCceeecccccchhhhHHHHHhhhccee
Q 012083 343 ADFGKMVKWAPQE---KVLAHPSVACYLT----------HCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGL 409 (471)
Q Consensus 343 ~~nv~~~~~vpq~---~lL~~~~~~~~It----------HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~ 409 (471)
++|+.+.+++|+. .+++.+++ +|. -|.-+++.||+++|+|+|+.+... ....+.. ...|.
T Consensus 235 ~~~v~~~g~~~~~~l~~~~~~adi--~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~----~~~~i~~-~~~g~ 307 (355)
T cd03799 235 EDRVTLLGAKSQEEVRELLRAADL--FVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSG----IPELVED-GETGL 307 (355)
T ss_pred CCeEEECCcCChHHHHHHHHhCCE--EEecceecCCCCccCccHHHHHHHHcCCCEEecCCCC----cchhhhC-CCceE
Confidence 5788899999854 57766776 555 233578999999999999875432 2334444 24888
Q ss_pred eecCCCCCCcCHhHHHHHHHHHhCcHHHHHHH
Q 012083 410 WLEPDDNGIIGRHEIKRKVDELLSNDVVRKNA 441 (471)
Q Consensus 410 ~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a 441 (471)
.+.. -+.+++.++|.++++|+...++.
T Consensus 308 ~~~~-----~~~~~l~~~i~~~~~~~~~~~~~ 334 (355)
T cd03799 308 LVPP-----GDPEALADAIERLLDDPELRREM 334 (355)
T ss_pred EeCC-----CCHHHHHHHHHHHHhCHHHHHHH
Confidence 8853 37899999999999998654333
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. |
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.81 E-value=1.1e-05 Score=78.85 Aligned_cols=132 Identities=15% Similarity=0.178 Sum_probs=72.6
Q ss_pred EEecCccccCCHHHHHHHHHHHHhCC--CCEEEEEcCCCCCCCCCCCCchhH--HhhCCCcEEEeccchh---hhhccCc
Q 012083 290 YAAFGSISKLSQQQFNELALGLELAG--QPFLCGVRPGFINGSSTNNPDGLV--AKVADFGKMVKWAPQE---KVLAHPS 362 (471)
Q Consensus 290 ~vs~GS~~~~~~~~~~~~~~al~~~~--~~~i~~~~~~~~~~~~~~lp~~~~--~~~~~nv~~~~~vpq~---~lL~~~~ 362 (471)
++..|++.. ...+..+++++.+.. .+++++-.+. ....+-..+. ....++|.+.+++|+. .++..++
T Consensus 196 i~~~G~~~~--~Kg~~~li~a~~~l~~~~~l~ivG~~~----~~~~~~~~~~~~~~~~~~V~~~g~~~~~~~~~~~~~ad 269 (363)
T cd04955 196 YLLVGRIVP--ENNIDDLIEAFSKSNSGKKLVIVGNAD----HNTPYGKLLKEKAAADPRIIFVGPIYDQELLELLRYAA 269 (363)
T ss_pred EEEEecccc--cCCHHHHHHHHHhhccCceEEEEcCCC----CcchHHHHHHHHhCCCCcEEEccccChHHHHHHHHhCC
Confidence 445677632 223455666665554 4444333221 0111111111 1235788899999986 4565555
Q ss_pred ceeeeeccCc-----chhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHH
Q 012083 363 VACYLTHCGW-----NSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVV 437 (471)
Q Consensus 363 ~~~~ItHgG~-----~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~ 437 (471)
+ ++.+.-. +++.||+++|+|+|+..... +...+.. -|..... . +.+.+++.++++|++.
T Consensus 270 ~--~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~----~~e~~~~---~g~~~~~------~-~~l~~~i~~l~~~~~~ 333 (363)
T cd04955 270 L--FYLHGHSVGGTNPSLLEAMAYGCPVLASDNPF----NREVLGD---KAIYFKV------G-DDLASLLEELEADPEE 333 (363)
T ss_pred E--EEeCCccCCCCChHHHHHHHcCCCEEEecCCc----cceeecC---CeeEecC------c-hHHHHHHHHHHhCHHH
Confidence 5 5554433 47999999999999875432 1112222 2333332 1 1299999999999755
Q ss_pred HHHHHH
Q 012083 438 RKNALK 443 (471)
Q Consensus 438 ~~~a~~ 443 (471)
.++..+
T Consensus 334 ~~~~~~ 339 (363)
T cd04955 334 VSAMAK 339 (363)
T ss_pred HHHHHH
Confidence 444333
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing | Back alignment and domain information |
|---|
Probab=98.80 E-value=1.3e-06 Score=85.18 Aligned_cols=132 Identities=14% Similarity=0.138 Sum_probs=79.6
Q ss_pred CcEEEEecCcc---ccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCCchhHHhh--CCCcEEEeccc---hhhh
Q 012083 286 GSVIYAAFGSI---SKLSQQQFNELALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAKV--ADFGKMVKWAP---QEKV 357 (471)
Q Consensus 286 ~~vv~vs~GS~---~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~--~~nv~~~~~vp---q~~l 357 (471)
++.|++++=.. .....+.+..+++++...+..+++..+... . ....+.+.+.+.. .+|+.+.+-++ ...+
T Consensus 201 ~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~~~~~~vi~P~~~-p-~~~~i~~~i~~~~~~~~~v~l~~~l~~~~~l~L 278 (365)
T TIGR03568 201 KPYALVTFHPVTLEKESAEEQIKELLKALDELNKNYIFTYPNAD-A-GSRIINEAIEEYVNEHPNFRLFKSLGQERYLSL 278 (365)
T ss_pred CCEEEEEeCCCcccccCchHHHHHHHHHHHHhccCCEEEEeCCC-C-CchHHHHHHHHHhcCCCCEEEECCCChHHHHHH
Confidence 35877877543 234466788999999887766665543220 0 0001111111111 36788876555 4578
Q ss_pred hccCcceeeeeccCcchhhHhhhcCCceeecccccchhhhHHHHHhhhcceee-ecCCCCCCcCHhHHHHHHHHHhCcHH
Q 012083 358 LAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLW-LEPDDNGIIGRHEIKRKVDELLSNDV 436 (471)
Q Consensus 358 L~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~-~~~~~~~~~~~~~l~~~i~~ll~~~~ 436 (471)
++++++ +||.++.+- .||...|+|+|.+- +.+ .- .+ .|-.+. +. .++++|.+++++++ +++
T Consensus 279 l~~a~~--vitdSSggi-~EA~~lg~Pvv~l~---~R~---e~-~~-~g~nvl~vg------~~~~~I~~a~~~~~-~~~ 340 (365)
T TIGR03568 279 LKNADA--VIGNSSSGI-IEAPSFGVPTINIG---TRQ---KG-RL-RADSVIDVD------PDKEEIVKAIEKLL-DPA 340 (365)
T ss_pred HHhCCE--EEEcChhHH-HhhhhcCCCEEeec---CCc---hh-hh-hcCeEEEeC------CCHHHHHHHHHHHh-ChH
Confidence 977777 999886655 99999999999874 211 11 12 133322 32 47899999999965 444
Q ss_pred H
Q 012083 437 V 437 (471)
Q Consensus 437 ~ 437 (471)
+
T Consensus 341 ~ 341 (365)
T TIGR03568 341 F 341 (365)
T ss_pred H
Confidence 3
|
This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate. |
| >cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Probab=98.80 E-value=4.6e-06 Score=81.28 Aligned_cols=93 Identities=12% Similarity=0.092 Sum_probs=61.6
Q ss_pred CCCcEEEeccch-hhhhccCcceeeeecc----CcchhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeecCCCCC
Q 012083 343 ADFGKMVKWAPQ-EKVLAHPSVACYLTHC----GWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNG 417 (471)
Q Consensus 343 ~~nv~~~~~vpq-~~lL~~~~~~~~ItHg----G~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~ 417 (471)
.+|+.+.++..+ ..+++.+++ +|.-. ..+++.||+++|+|+|+. |...+...+.+ .|. .+..
T Consensus 244 ~~~v~~~g~~~~~~~~~~~ad~--~v~~s~~e~~~~~~~Ea~a~G~PvI~~----~~~~~~e~i~~-~g~--~~~~---- 310 (360)
T cd04951 244 SNRVKLLGLRDDIAAYYNAADL--FVLSSAWEGFGLVVAEAMACELPVVAT----DAGGVREVVGD-SGL--IVPI---- 310 (360)
T ss_pred CCcEEEecccccHHHHHHhhce--EEecccccCCChHHHHHHHcCCCEEEe----cCCChhhEecC-Cce--EeCC----
Confidence 467888887765 367877776 55432 257899999999999875 44455555555 244 3422
Q ss_pred CcCHhHHHHHHHHHh-CcHHHHHHHHHHHHHHH
Q 012083 418 IIGRHEIKRKVDELL-SNDVVRKNALKLKELAQ 449 (471)
Q Consensus 418 ~~~~~~l~~~i~~ll-~~~~~~~~a~~l~~~~~ 449 (471)
-+.+++.+++.+++ .++.+++......+.+.
T Consensus 311 -~~~~~~~~~i~~ll~~~~~~~~~~~~~~~~~~ 342 (360)
T cd04951 311 -SDPEALANKIDEILKMSGEERDIIGARRERIV 342 (360)
T ss_pred -CCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 37789999999999 45566655554433333
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have |
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.80 E-value=2.6e-05 Score=75.63 Aligned_cols=82 Identities=16% Similarity=0.209 Sum_probs=55.9
Q ss_pred CCCcEEEeccch-hhhhccCcceeeeeccC----cchhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeecCCCCC
Q 012083 343 ADFGKMVKWAPQ-EKVLAHPSVACYLTHCG----WNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNG 417 (471)
Q Consensus 343 ~~nv~~~~~vpq-~~lL~~~~~~~~ItHgG----~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~ 417 (471)
.+++.+.+...+ ..+++.+++ +|..+. .+++.||+++|+|+|+... ..+...+.+ .|..++.
T Consensus 250 ~~~v~~~g~~~~~~~~~~~adi--~v~ps~~e~~~~~~~Ea~a~g~PvI~~~~----~~~~e~~~~---~g~~~~~---- 316 (365)
T cd03807 250 EDKVILLGERSDVPALLNALDV--FVLSSLSEGFPNVLLEAMACGLPVVATDV----GDNAELVGD---TGFLVPP---- 316 (365)
T ss_pred CceEEEccccccHHHHHHhCCE--EEeCCccccCCcHHHHHHhcCCCEEEcCC----CChHHHhhc---CCEEeCC----
Confidence 456666665544 368877776 776544 4799999999999998543 334444433 4555532
Q ss_pred CcCHhHHHHHHHHHhCcHHHH
Q 012083 418 IIGRHEIKRKVDELLSNDVVR 438 (471)
Q Consensus 418 ~~~~~~l~~~i~~ll~~~~~~ 438 (471)
-+.+++.++|.++++|++.+
T Consensus 317 -~~~~~l~~~i~~l~~~~~~~ 336 (365)
T cd03807 317 -GDPEALAEAIEALLADPALR 336 (365)
T ss_pred -CCHHHHHHHHHHHHhChHHH
Confidence 36789999999999987433
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. |
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Probab=98.78 E-value=9.5e-06 Score=80.16 Aligned_cols=143 Identities=15% Similarity=0.157 Sum_probs=80.6
Q ss_pred EEEEecCccccCCHHHHHHHHHHHHhC--CCCEEEEEcCCCCCCCCCCCCchhHHh---h---CCCcEEE-eccchh---
Q 012083 288 VIYAAFGSISKLSQQQFNELALGLELA--GQPFLCGVRPGFINGSSTNNPDGLVAK---V---ADFGKMV-KWAPQE--- 355 (471)
Q Consensus 288 vv~vs~GS~~~~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~~lp~~~~~~---~---~~nv~~~-~~vpq~--- 355 (471)
.+++..|.... ...+..+++++..+ +.++++..++. ....+-+.+.+. . .+++.+. +++++.
T Consensus 202 ~~i~~~Grl~~--~Kg~~~li~a~~~l~~~~~l~i~g~g~----~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 275 (388)
T TIGR02149 202 PYILFVGRITR--QKGVPHLLDAVHYIPKDVQVVLCAGAP----DTPEVAEEVRQAVALLDRNRTGIIWINKMLPKEELV 275 (388)
T ss_pred eEEEEEccccc--ccCHHHHHHHHHHHhhcCcEEEEeCCC----CcHHHHHHHHHHHHHhccccCceEEecCCCCHHHHH
Confidence 55666677532 22345555566544 44555544432 111111111111 1 1335544 678754
Q ss_pred hhhccCcceeeeec----cCcchhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeecCCCC-CCcCHhHHHHHHHH
Q 012083 356 KVLAHPSVACYLTH----CGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDN-GIIGRHEIKRKVDE 430 (471)
Q Consensus 356 ~lL~~~~~~~~ItH----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~-~~~~~~~l~~~i~~ 430 (471)
.+++.+++ +|.- |...++.||+++|+|+|+... ......+.. -+.|..++.++. ..-..+++.++|.+
T Consensus 276 ~~~~~aDv--~v~ps~~e~~g~~~lEA~a~G~PvI~s~~----~~~~e~i~~-~~~G~~~~~~~~~~~~~~~~l~~~i~~ 348 (388)
T TIGR02149 276 ELLSNAEV--FVCPSIYEPLGIVNLEAMACGTPVVASAT----GGIPEVVVD-GETGFLVPPDNSDADGFQAELAKAINI 348 (388)
T ss_pred HHHHhCCE--EEeCCccCCCChHHHHHHHcCCCEEEeCC----CCHHHHhhC-CCceEEcCCCCCcccchHHHHHHHHHH
Confidence 57877777 6643 334577999999999998754 345555666 367888864110 01112799999999
Q ss_pred HhCcHHHHHHHHH
Q 012083 431 LLSNDVVRKNALK 443 (471)
Q Consensus 431 ll~~~~~~~~a~~ 443 (471)
+++|++.+++..+
T Consensus 349 l~~~~~~~~~~~~ 361 (388)
T TIGR02149 349 LLADPELAKKMGI 361 (388)
T ss_pred HHhCHHHHHHHHH
Confidence 9999865544433
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor. |
| >COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.77 E-value=2.7e-05 Score=74.26 Aligned_cols=315 Identities=14% Similarity=0.082 Sum_probs=181.2
Q ss_pred CCcccHHHHHHHHHHHHhC--CCeEEEEe-CCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCCcccHHHHHH
Q 012083 26 PAQGHVASLMKLAHRLADC--RIKVTFVT-TEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDDRKDEAKMTR 102 (471)
Q Consensus 26 ~~~GH~~p~~~La~~L~~r--Gh~Vt~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 102 (471)
-+.|-++-..+|.++|.++ ++.|++-+ ++...+.+.+.. .+.+....+|-+.
T Consensus 57 aSVGEv~a~~pLv~~l~~~~P~~~ilvTt~T~Tg~e~a~~~~-----------~~~v~h~YlP~D~-------------- 111 (419)
T COG1519 57 ASVGEVLAALPLVRALRERFPDLRILVTTMTPTGAERAAALF-----------GDSVIHQYLPLDL-------------- 111 (419)
T ss_pred cchhHHHHHHHHHHHHHHhCCCCCEEEEecCccHHHHHHHHc-----------CCCeEEEecCcCc--------------
Confidence 5789999999999999998 88988887 555666665442 1234555554321
Q ss_pred HHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchH--HHHHHHcCCceEEEeCchHHHHHHHhchhhhhhhCCCCCC
Q 012083 103 SISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWA--LQVAAKLELKKASIYTSAPGILAMIMNIPKFIEAGIISSD 180 (471)
Q Consensus 103 ~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~--~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 180 (471)
...++.+++. ++||++|.-....|. ..-++..|+|.+.+..= ++
T Consensus 112 ------~~~v~rFl~~-------~~P~l~Ii~EtElWPnli~e~~~~~~p~~LvNaR-------------------LS-- 157 (419)
T COG1519 112 ------PIAVRRFLRK-------WRPKLLIIMETELWPNLINELKRRGIPLVLVNAR-------------------LS-- 157 (419)
T ss_pred ------hHHHHHHHHh-------cCCCEEEEEeccccHHHHHHHHHcCCCEEEEeee-------------------ec--
Confidence 1124556777 899998866655544 55677899999996320 00
Q ss_pred cccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHh-hhccCcEEEEcchhhhchhhhhh-CCCcceecc
Q 012083 181 GIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQ-NIEASDRILCTWFHELAPSANKI-LPSIIPVGP 258 (471)
Q Consensus 181 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~s~~~l~~~~~~~-~~~~~~vGp 258 (471)
+.. .+. +..+....+ .+.+.+.++..+..+-+-- ..+ .+++...|-
T Consensus 158 ---------------------~rS---------~~~-y~k~~~~~~~~~~~i~li~aQse~D~~Rf-~~LGa~~v~v~GN 205 (419)
T COG1519 158 ---------------------DRS---------FAR-YAKLKFLARLLFKNIDLILAQSEEDAQRF-RSLGAKPVVVTGN 205 (419)
T ss_pred ---------------------hhh---------hHH-HHHHHHHHHHHHHhcceeeecCHHHHHHH-HhcCCcceEEecc
Confidence 000 000 111111122 2356788888876655432 122 345777887
Q ss_pred ccCCCCCCCCCCcCcc----hhcccccCCCCCcEEEEecCccccCCHHHHHHHHHHHHhCC-CCEEEEEcCCCCCCC---
Q 012083 259 LIANGQPTGNFWSEDL----TCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELAG-QPFLCGVRPGFINGS--- 330 (471)
Q Consensus 259 ~~~~~~~~~~~~~~~~----~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~-~~~i~~~~~~~~~~~--- 330 (471)
+-.+... .+... .+...++.. ..+.|..+|. ....+.+.....++.+.. ...++.++...+..+
T Consensus 206 lKfd~~~----~~~~~~~~~~~r~~l~~~---r~v~iaaSTH-~GEeei~l~~~~~l~~~~~~~llIlVPRHpERf~~v~ 277 (419)
T COG1519 206 LKFDIEP----PPQLAAELAALRRQLGGH---RPVWVAASTH-EGEEEIILDAHQALKKQFPNLLLILVPRHPERFKAVE 277 (419)
T ss_pred eeecCCC----ChhhHHHHHHHHHhcCCC---CceEEEecCC-CchHHHHHHHHHHHHhhCCCceEEEecCChhhHHHHH
Confidence 7555431 11111 222333332 2666666663 223333445555554333 233444443311100
Q ss_pred ----CCCCCchhHH-----hhCCCcEEEeccchh-hhhccCcc----eeeeeccCcchhhHhhhcCCceeecccccchhh
Q 012083 331 ----STNNPDGLVA-----KVADFGKMVKWAPQE-KVLAHPSV----ACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLY 396 (471)
Q Consensus 331 ----~~~lp~~~~~-----~~~~nv~~~~~vpq~-~lL~~~~~----~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~ 396 (471)
...+.-.... -...+|.+++-+--+ .++.-+++ +-++-+||+| ..|.+++|+|++.=|+..-|.+
T Consensus 278 ~l~~~~gl~~~~rS~~~~~~~~tdV~l~DtmGEL~l~y~~adiAFVGGSlv~~GGHN-~LEpa~~~~pvi~Gp~~~Nf~e 356 (419)
T COG1519 278 NLLKRKGLSVTRRSQGDPPFSDTDVLLGDTMGELGLLYGIADIAFVGGSLVPIGGHN-PLEPAAFGTPVIFGPYTFNFSD 356 (419)
T ss_pred HHHHHcCCeEEeecCCCCCCCCCcEEEEecHhHHHHHHhhccEEEECCcccCCCCCC-hhhHHHcCCCEEeCCccccHHH
Confidence 0000000000 002356666665533 34443443 1145589988 5799999999999999999999
Q ss_pred hHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHHH
Q 012083 397 IKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKELA 448 (471)
Q Consensus 397 na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~ 448 (471)
-++++.++ |.|+.++ +.+.+.+++..++.|++.+++..+-+..+
T Consensus 357 i~~~l~~~-ga~~~v~-------~~~~l~~~v~~l~~~~~~r~~~~~~~~~~ 400 (419)
T COG1519 357 IAERLLQA-GAGLQVE-------DADLLAKAVELLLADEDKREAYGRAGLEF 400 (419)
T ss_pred HHHHHHhc-CCeEEEC-------CHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 99999995 9999995 36888999999998876665554444444
|
|
| >TIGR02470 sucr_synth sucrose synthase | Back alignment and domain information |
|---|
Probab=98.73 E-value=4.5e-05 Score=79.91 Aligned_cols=92 Identities=10% Similarity=0.093 Sum_probs=58.2
Q ss_pred CCCcEEEecc-chh---hhhcc-Cc-ceeeeec----cCcchhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeec
Q 012083 343 ADFGKMVKWA-PQE---KVLAH-PS-VACYLTH----CGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLE 412 (471)
Q Consensus 343 ~~nv~~~~~v-pq~---~lL~~-~~-~~~~ItH----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~ 412 (471)
.++|.+.++. +.. .++.+ ++ .++||.- +--.++.||++||+|+|+.-. ...+..+... .-|..++
T Consensus 618 ~g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~----GG~~EiV~dg-~tGfLVd 692 (784)
T TIGR02470 618 HGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRF----GGPLEIIQDG-VSGFHID 692 (784)
T ss_pred CCeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCC----CCHHHHhcCC-CcEEEeC
Confidence 4677777764 322 34432 21 2336643 224589999999999998643 3455556662 5688886
Q ss_pred CCCCCCcCHhHHHHHHHHHh----CcHHHHHHHHHH
Q 012083 413 PDDNGIIGRHEIKRKVDELL----SNDVVRKNALKL 444 (471)
Q Consensus 413 ~~~~~~~~~~~l~~~i~~ll----~~~~~~~~a~~l 444 (471)
+ -+.++++++|.+++ .|++.+++..+-
T Consensus 693 p-----~D~eaLA~aL~~ll~kll~dp~~~~~ms~~ 723 (784)
T TIGR02470 693 P-----YHGEEAAEKIVDFFEKCDEDPSYWQKISQG 723 (784)
T ss_pred C-----CCHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 4 36788999988775 677655554433
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria. |
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.68 E-value=1.3e-05 Score=78.01 Aligned_cols=93 Identities=12% Similarity=0.246 Sum_probs=64.3
Q ss_pred hCCCcEEEeccchh---hhhccCcceeeeec----cCcchhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeecCC
Q 012083 342 VADFGKMVKWAPQE---KVLAHPSVACYLTH----CGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPD 414 (471)
Q Consensus 342 ~~~nv~~~~~vpq~---~lL~~~~~~~~ItH----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~ 414 (471)
..+++.+.+++|+. .+++.+++ +|.. |..+++.||+++|+|+|+..... ....+.+ .|..+..
T Consensus 251 ~~~~v~~~g~~~~~~~~~~~~~~d~--~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~----~~e~~~~---~~~~~~~- 320 (365)
T cd03809 251 LGDRVRFLGYVSDEELAALYRGARA--FVFPSLYEGFGLPVLEAMACGTPVIASNISS----LPEVAGD---AALYFDP- 320 (365)
T ss_pred CCCeEEECCCCChhHHHHHHhhhhh--hcccchhccCCCCHHHHhcCCCcEEecCCCC----ccceecC---ceeeeCC-
Confidence 46788888999875 56766776 5433 34568999999999999865421 2222222 3445532
Q ss_pred CCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHHH
Q 012083 415 DNGIIGRHEIKRKVDELLSNDVVRKNALKLKELA 448 (471)
Q Consensus 415 ~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~ 448 (471)
-+.+++.+++.+++.|++.+.+..+-+...
T Consensus 321 ----~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~ 350 (365)
T cd03809 321 ----LDPEALAAAIERLLEDPALREELRERGLAR 350 (365)
T ss_pred ----CCHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 378999999999999998777766655543
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. |
| >COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.68 E-value=4.1e-06 Score=79.06 Aligned_cols=350 Identities=13% Similarity=0.086 Sum_probs=184.2
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCC-CeEEEEeCCcchh-hhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCCc
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADCR-IKVTFVTTEFICE-RIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDDR 94 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~rG-h~Vt~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 94 (471)
++||+++. |++-.+.=+.+|.+++.+.+ .+..++.+....+ ..-......+ ++....+ .+.-....
T Consensus 3 ~~Kv~~I~-GTRPE~iKmapli~~~~~~~~~~~~vi~TGQH~d~em~~~~le~~---------~i~~pdy--~L~i~~~~ 70 (383)
T COG0381 3 MLKVLTIF-GTRPEAIKMAPLVKALEKDPDFELIVIHTGQHRDYEMLDQVLELF---------GIRKPDY--DLNIMKPG 70 (383)
T ss_pred ceEEEEEE-ecCHHHHHHhHHHHHHHhCCCCceEEEEecccccHHHHHHHHHHh---------CCCCCCc--chhccccC
Confidence 36777665 99999999999999999987 7777776666552 2222211000 2222000 11111234
Q ss_pred ccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEE--CCCcc-hHHHHHHHcCCceEEEeCchHHHHHHHhchhhh
Q 012083 95 KDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIA--DVTFG-WALQVAAKLELKKASIYTSAPGILAMIMNIPKF 171 (471)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~--D~~~~-~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~ 171 (471)
.++.+.... +-..+.+++.+ .+||+|++ |.... +++.+|.+.+||+.-+-.+.-+....
T Consensus 71 ~tl~~~t~~----~i~~~~~vl~~-------~kPD~VlVhGDT~t~lA~alaa~~~~IpV~HvEAGlRt~~~~------- 132 (383)
T COG0381 71 QTLGEITGN----IIEGLSKVLEE-------EKPDLVLVHGDTNTTLAGALAAFYLKIPVGHVEAGLRTGDLY------- 132 (383)
T ss_pred CCHHHHHHH----HHHHHHHHHHh-------hCCCEEEEeCCcchHHHHHHHHHHhCCceEEEecccccCCCC-------
Confidence 444443333 33346677776 89999885 44433 66889999999998865433221000
Q ss_pred hhhCCCCCCcccccccccccCCCCCCCCccccC-CCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhchhhhhhC
Q 012083 172 IEAGIISSDGIVIKNEKIELSPYLPAASPAEFL-WNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSANKIL 250 (471)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~ 250 (471)
+|.+.+ ..-...+. +.|.- .....+.+. +.-.....+++.....+|-- ....
T Consensus 133 ----------~PEE~N---------R~l~~~~S~~hfap----te~ar~nLl---~EG~~~~~IfvtGnt~iDal-~~~~ 185 (383)
T COG0381 133 ----------FPEEIN---------RRLTSHLSDLHFAP----TEIARKNLL---REGVPEKRIFVTGNTVIDAL-LNTR 185 (383)
T ss_pred ----------CcHHHH---------HHHHHHhhhhhcCC----hHHHHHHHH---HcCCCccceEEeCChHHHHH-HHHH
Confidence 000000 00000000 00000 000011110 11112223444443333321 0000
Q ss_pred CCcceeccccCCCCCCCCCCcCcchhccc-ccCCCCCcEEEEecCccccCCHHHHHHHHHHH----HhC-CCCEEEEEcC
Q 012083 251 PSIIPVGPLIANGQPTGNFWSEDLTCLSW-LDKQPPGSVIYAAFGSISKLSQQQFNELALGL----ELA-GQPFLCGVRP 324 (471)
Q Consensus 251 ~~~~~vGp~~~~~~~~~~~~~~~~~l~~~-l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al----~~~-~~~~i~~~~~ 324 (471)
.....+.....- +.. +++..|++++=...... +.+..+..++ +.. +..+|.-+..
T Consensus 186 -----------------~~~~~~~~~~~~~~~~-~~~~~iLvT~HRreN~~-~~~~~i~~al~~i~~~~~~~~viyp~H~ 246 (383)
T COG0381 186 -----------------DRVLEDSKILAKGLDD-KDKKYILVTAHRRENVG-EPLEEICEALREIAEEYPDVIVIYPVHP 246 (383)
T ss_pred -----------------hhhccchhhHHhhhcc-ccCcEEEEEcchhhccc-ccHHHHHHHHHHHHHhCCCceEEEeCCC
Confidence 000111111110 122 22448888875544444 3445555544 444 4455555443
Q ss_pred CCCCCCCCCCCchhHHhhC--CCcEEE---eccchhhhhccCcceeeeeccCcchhhHhhhcCCceeecccccchhhhHH
Q 012083 325 GFINGSSTNNPDGLVAKVA--DFGKMV---KWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKS 399 (471)
Q Consensus 325 ~~~~~~~~~lp~~~~~~~~--~nv~~~---~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~ 399 (471)
. ....+-..++.. +|+++. +|.+...++.++.+ ++|-.|. -.-||-..|+|++++=...+++.
T Consensus 247 ~------~~v~e~~~~~L~~~~~v~li~pl~~~~f~~L~~~a~~--iltDSGg-iqEEAp~lg~Pvl~lR~~TERPE--- 314 (383)
T COG0381 247 R------PRVRELVLKRLKNVERVKLIDPLGYLDFHNLMKNAFL--ILTDSGG-IQEEAPSLGKPVLVLRDTTERPE--- 314 (383)
T ss_pred C------hhhhHHHHHHhCCCCcEEEeCCcchHHHHHHHHhceE--EEecCCc-hhhhHHhcCCcEEeeccCCCCcc---
Confidence 2 111111112233 457765 78888999988877 9998875 45799999999999999999995
Q ss_pred HHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHH
Q 012083 400 CICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKELAQKSVTKEGSSSKNLEYFI 466 (471)
Q Consensus 400 ~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~ 466 (471)
+ .++ |.-+.+. .+.+.|.+++..++++++..+|.+....-..+ |.+|.+.++.+.
T Consensus 315 ~-v~a-gt~~lvg------~~~~~i~~~~~~ll~~~~~~~~m~~~~npYgd----g~as~rIv~~l~ 369 (383)
T COG0381 315 G-VEA-GTNILVG------TDEENILDAATELLEDEEFYERMSNAKNPYGD----GNASERIVEILL 369 (383)
T ss_pred c-eec-CceEEeC------ccHHHHHHHHHHHhhChHHHHHHhcccCCCcC----cchHHHHHHHHH
Confidence 2 332 5555554 47799999999999999888877766665543 444544444433
|
|
| >PLN02846 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=98.67 E-value=3.5e-05 Score=76.50 Aligned_cols=73 Identities=12% Similarity=0.124 Sum_probs=50.8
Q ss_pred EEeccchhhhhccCcceeeeec----cCcchhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeecCCCCCCcCHhH
Q 012083 348 MVKWAPQEKVLAHPSVACYLTH----CGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHE 423 (471)
Q Consensus 348 ~~~~vpq~~lL~~~~~~~~ItH----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~ 423 (471)
+.++.....+++..++ ||.- +=.+++.||+++|+|+|+.-... + ..+.+ -+-|...+ +.++
T Consensus 288 f~G~~~~~~~~~~~Dv--Fv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~----~-~~v~~-~~ng~~~~-------~~~~ 352 (462)
T PLN02846 288 YPGRDHADPLFHDYKV--FLNPSTTDVVCTTTAEALAMGKIVVCANHPS----N-EFFKQ-FPNCRTYD-------DGKG 352 (462)
T ss_pred ECCCCCHHHHHHhCCE--EEECCCcccchHHHHHHHHcCCcEEEecCCC----c-ceeec-CCceEecC-------CHHH
Confidence 3466666678866665 8877 34678999999999999985432 2 33333 24454442 5789
Q ss_pred HHHHHHHHhCcH
Q 012083 424 IKRKVDELLSND 435 (471)
Q Consensus 424 l~~~i~~ll~~~ 435 (471)
+.+++.++|.++
T Consensus 353 ~a~ai~~~l~~~ 364 (462)
T PLN02846 353 FVRATLKALAEE 364 (462)
T ss_pred HHHHHHHHHccC
Confidence 999999999864
|
|
| >PLN02275 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=98.65 E-value=5.3e-05 Score=74.40 Aligned_cols=75 Identities=20% Similarity=0.302 Sum_probs=52.4
Q ss_pred CCcEEE-eccchhh---hhccCcceeeee-c-----cC-cchhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeec
Q 012083 344 DFGKMV-KWAPQEK---VLAHPSVACYLT-H-----CG-WNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLE 412 (471)
Q Consensus 344 ~nv~~~-~~vpq~~---lL~~~~~~~~It-H-----gG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~ 412 (471)
+|+.+. .|+|+.+ +|+.+++ +|. + -| -+++.||+++|+|+|+... ..+...+.+. +.|..++
T Consensus 286 ~~v~~~~~~~~~~~~~~~l~~aDv--~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~----gg~~eiv~~g-~~G~lv~ 358 (371)
T PLN02275 286 RHVAFRTMWLEAEDYPLLLGSADL--GVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSY----SCIGELVKDG-KNGLLFS 358 (371)
T ss_pred CceEEEcCCCCHHHHHHHHHhCCE--EEEeccccccccccHHHHHHHHCCCCEEEecC----CChHHHccCC-CCeEEEC
Confidence 556665 4788764 4877777 663 1 12 3579999999999998743 3355666663 6788873
Q ss_pred CCCCCCcCHhHHHHHHHHHh
Q 012083 413 PDDNGIIGRHEIKRKVDELL 432 (471)
Q Consensus 413 ~~~~~~~~~~~l~~~i~~ll 432 (471)
+.+++.++|.++|
T Consensus 359 -------~~~~la~~i~~l~ 371 (371)
T PLN02275 359 -------SSSELADQLLELL 371 (371)
T ss_pred -------CHHHHHHHHHHhC
Confidence 4789999998875
|
|
| >TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=98.61 E-value=3.5e-05 Score=76.45 Aligned_cols=90 Identities=17% Similarity=0.134 Sum_probs=62.8
Q ss_pred CCCcEEEeccchh-hhhccCcceeee--ec--cCc-chhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeecCCCC
Q 012083 343 ADFGKMVKWAPQE-KVLAHPSVACYL--TH--CGW-NSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDN 416 (471)
Q Consensus 343 ~~nv~~~~~vpq~-~lL~~~~~~~~I--tH--gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~ 416 (471)
.+++.+.+++++. .+++.+++ +| ++ .|. +.+.||+++|+|+|+.+...+.. ... -|.|..+.
T Consensus 279 ~~~V~~~G~v~~~~~~~~~adv--~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~~i-----~~~-~~~g~lv~---- 346 (397)
T TIGR03087 279 LPGVTVTGSVADVRPYLAHAAV--AVAPLRIARGIQNKVLEAMAMAKPVVASPEAAEGI-----DAL-PGAELLVA---- 346 (397)
T ss_pred CCCeEEeeecCCHHHHHHhCCE--EEecccccCCcccHHHHHHHcCCCEEecCcccccc-----ccc-CCcceEeC----
Confidence 4678888999864 67877777 55 32 354 46999999999999987543321 123 26676663
Q ss_pred CCcCHhHHHHHHHHHhCcHHHHHHHHHHHH
Q 012083 417 GIIGRHEIKRKVDELLSNDVVRKNALKLKE 446 (471)
Q Consensus 417 ~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~ 446 (471)
-+.+++.++|.++++|++.+++..+-++
T Consensus 347 --~~~~~la~ai~~ll~~~~~~~~~~~~ar 374 (397)
T TIGR03087 347 --ADPADFAAAILALLANPAEREELGQAAR 374 (397)
T ss_pred --CCHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 3789999999999999865555444333
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 | Back alignment and domain information |
|---|
Probab=98.61 E-value=1.3e-07 Score=91.22 Aligned_cols=255 Identities=13% Similarity=0.089 Sum_probs=127.7
Q ss_pred ccHHHHHHHHHHhcccCCCCeeEEEE--CCCcc-hHHHHHHHcCCceEEEeCchHHHHHHHhchhhhhhhCCCCCCcccc
Q 012083 108 MPGYLEELIQKINQQEEDEKITCVIA--DVTFG-WALQVAAKLELKKASIYTSAPGILAMIMNIPKFIEAGIISSDGIVI 184 (471)
Q Consensus 108 ~~~~~~~ll~~l~~~~~~~~pD~vV~--D~~~~-~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 184 (471)
+...+.+++.. .+||+||+ |-... +++.+|..++||++-+..+.-+.
T Consensus 55 ~~~~~~~~~~~-------~~Pd~Vlv~GD~~~~la~alaA~~~~ipv~HieaGlRs~----------------------- 104 (346)
T PF02350_consen 55 AIIELADVLER-------EKPDAVLVLGDRNEALAAALAAFYLNIPVAHIEAGLRSG----------------------- 104 (346)
T ss_dssp HHHHHHHHHHH-------HT-SEEEEETTSHHHHHHHHHHHHTT-EEEEES-----S-----------------------
T ss_pred HHHHHHHHHHh-------cCCCEEEEEcCCchHHHHHHHHHHhCCCEEEecCCCCcc-----------------------
Confidence 33446667776 79999875 44433 77899999999988865432110
Q ss_pred cccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhchhhhhh--CCCcceeccccCC
Q 012083 185 KNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSANKI--LPSIIPVGPLIAN 262 (471)
Q Consensus 185 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~--~~~~~~vGp~~~~ 262 (471)
+ ...+++ +...+.... ..+++.++.+...-+.-.... +.+++.+|....+
T Consensus 105 --d---~~~g~~-----------------de~~R~~i~------~la~lhf~~t~~~~~~L~~~G~~~~rI~~vG~~~~D 156 (346)
T PF02350_consen 105 --D---RTEGMP-----------------DEINRHAID------KLAHLHFAPTEEARERLLQEGEPPERIFVVGNPGID 156 (346)
T ss_dssp ------TTSSTT-----------------HHHHHHHHH------HH-SEEEESSHHHHHHHHHTT--GGGEEE---HHHH
T ss_pred --c---cCCCCc-----------------hhhhhhhhh------hhhhhhccCCHHHHHHHHhcCCCCCeEEEEChHHHH
Confidence 0 000001 222222222 246666666655443321111 3467777765443
Q ss_pred CCCCCCCCcCcchh--cccccCCCCCcEEEEecCccccCC-H---HHHHHHHHHHHhC-CCCEEEEEcCCCCCCCCCCCC
Q 012083 263 GQPTGNFWSEDLTC--LSWLDKQPPGSVIYAAFGSISKLS-Q---QQFNELALGLELA-GQPFLCGVRPGFINGSSTNNP 335 (471)
Q Consensus 263 ~~~~~~~~~~~~~l--~~~l~~~~~~~vv~vs~GS~~~~~-~---~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~lp 335 (471)
.-..... .....+ ..++.. .+++.+++++=...... + ..+..+++++.+. +..+||.+... +...
T Consensus 157 ~l~~~~~-~~~~~~~~~~i~~~-~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~~~~~vi~~~hn~------p~~~ 228 (346)
T PF02350_consen 157 ALLQNKE-EIEEKYKNSGILQD-APKPYILVTLHPVTNEDNPERLEQILEALKALAERQNVPVIFPLHNN------PRGS 228 (346)
T ss_dssp HHHHHHH-TTCC-HHHHHHHHC-TTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHHTTEEEEEE--S-------HHHH
T ss_pred HHHHhHH-HHhhhhhhHHHHhc-cCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhcCCCcEEEEecCC------chHH
Confidence 2100000 000000 012122 44679999985544444 3 3455566677655 77889888733 0001
Q ss_pred chhHHhhC--CCcEEEeccc---hhhhhccCcceeeeeccCcchhh-HhhhcCCceeecccccchhhhHHHHHhhhccee
Q 012083 336 DGLVAKVA--DFGKMVKWAP---QEKVLAHPSVACYLTHCGWNSTM-EGISMGVPFLCWPWGHDHLYIKSCICDDWKIGL 409 (471)
Q Consensus 336 ~~~~~~~~--~nv~~~~~vp---q~~lL~~~~~~~~ItHgG~~s~~-eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~ 409 (471)
..+.+... +|++++.-++ ...+|+++++ +|+..| ++. ||.++|+|+|.+= |+..+-.-+.. |-.+
T Consensus 229 ~~i~~~l~~~~~v~~~~~l~~~~~l~ll~~a~~--vvgdSs--GI~eEa~~lg~P~v~iR---~~geRqe~r~~--~~nv 299 (346)
T PF02350_consen 229 DIIIEKLKKYDNVRLIEPLGYEEYLSLLKNADL--VVGDSS--GIQEEAPSLGKPVVNIR---DSGERQEGRER--GSNV 299 (346)
T ss_dssp HHHHHHHTT-TTEEEE----HHHHHHHHHHESE--EEESSH--HHHHHGGGGT--EEECS---SS-S-HHHHHT--TSEE
T ss_pred HHHHHHhcccCCEEEECCCCHHHHHHHHhcceE--EEEcCc--cHHHHHHHhCCeEEEec---CCCCCHHHHhh--cceE
Confidence 12222221 4888886665 4578988887 999999 566 9999999999992 22222222222 5555
Q ss_pred eecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHH
Q 012083 410 WLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALK 443 (471)
Q Consensus 410 ~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~ 443 (471)
.+. .+.++|.+++++++++.+...+.+.
T Consensus 300 lv~------~~~~~I~~ai~~~l~~~~~~~~~~~ 327 (346)
T PF02350_consen 300 LVG------TDPEAIIQAIEKALSDKDFYRKLKN 327 (346)
T ss_dssp EET------SSHHHHHHHHHHHHH-HHHHHHHHC
T ss_pred EeC------CCHHHHHHHHHHHHhChHHHHhhcc
Confidence 553 4889999999999988554444443
|
1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C. |
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Probab=98.59 E-value=2.3e-05 Score=76.97 Aligned_cols=91 Identities=18% Similarity=0.142 Sum_probs=59.7
Q ss_pred CCCcEEEecc--chh---hhhccCcceeeeecc---C-cchhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeecC
Q 012083 343 ADFGKMVKWA--PQE---KVLAHPSVACYLTHC---G-WNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEP 413 (471)
Q Consensus 343 ~~nv~~~~~v--pq~---~lL~~~~~~~~ItHg---G-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~ 413 (471)
.+++.+.++. ++. .+++.+++ |+... | -.++.||+++|+|+|+.... .....+.. -..|...+
T Consensus 251 ~~~v~~~~~~~~~~~~~~~~~~~ad~--~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~----~~~~~i~~-~~~g~~~~- 322 (372)
T cd03792 251 DPDIHVLTLPPVSDLEVNALQRASTV--VLQKSIREGFGLTVTEALWKGKPVIAGPVG----GIPLQIED-GETGFLVD- 322 (372)
T ss_pred CCCeEEEecCCCCHHHHHHHHHhCeE--EEeCCCccCCCHHHHHHHHcCCCEEEcCCC----Cchhhccc-CCceEEeC-
Confidence 4667777776 432 56766666 77543 2 45999999999999987543 23334444 25566553
Q ss_pred CCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHH
Q 012083 414 DDNGIIGRHEIKRKVDELLSNDVVRKNALKLKEL 447 (471)
Q Consensus 414 ~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~ 447 (471)
+.+++..+|.+++.|++.+++..+-+..
T Consensus 323 ------~~~~~a~~i~~ll~~~~~~~~~~~~a~~ 350 (372)
T cd03792 323 ------TVEEAAVRILYLLRDPELRRKMGANARE 350 (372)
T ss_pred ------CcHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 3467888999999998766555444433
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. |
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.59 E-value=5.5e-06 Score=80.70 Aligned_cols=137 Identities=13% Similarity=0.162 Sum_probs=89.0
Q ss_pred EEEecCccccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCCchhHHhhCCCcEEEeccchh---hhhccCccee
Q 012083 289 IYAAFGSISKLSQQQFNELALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQE---KVLAHPSVAC 365 (471)
Q Consensus 289 v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~---~lL~~~~~~~ 365 (471)
.++..|++. ....+..++++++..+.++++.-.+. ..+.+.+...+||.+.+++|+. .+++.+++-+
T Consensus 197 ~il~~G~~~--~~K~~~~li~a~~~~~~~l~ivG~g~--------~~~~l~~~~~~~V~~~g~~~~~~~~~~~~~ad~~v 266 (351)
T cd03804 197 YYLSVGRLV--PYKRIDLAIEAFNKLGKRLVVIGDGP--------ELDRLRAKAGPNVTFLGRVSDEELRDLYARARAFL 266 (351)
T ss_pred EEEEEEcCc--cccChHHHHHHHHHCCCcEEEEECCh--------hHHHHHhhcCCCEEEecCCCHHHHHHHHHhCCEEE
Confidence 345566643 22346667888887777766554332 1123333457899999999984 5787777733
Q ss_pred eeeccCc-chhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcH-HHHHHHHH
Q 012083 366 YLTHCGW-NSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSND-VVRKNALK 443 (471)
Q Consensus 366 ~ItHgG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~-~~~~~a~~ 443 (471)
+-+.-|. .++.||+++|+|+|+....+ ....+.+ -+.|..+++ -+.+++.++|..+++|+ ..++++++
T Consensus 267 ~ps~e~~g~~~~Eama~G~Pvi~~~~~~----~~e~i~~-~~~G~~~~~-----~~~~~la~~i~~l~~~~~~~~~~~~~ 336 (351)
T cd03804 267 FPAEEDFGIVPVEAMASGTPVIAYGKGG----ALETVID-GVTGILFEE-----QTVESLAAAVERFEKNEDFDPQAIRA 336 (351)
T ss_pred ECCcCCCCchHHHHHHcCCCEEEeCCCC----CcceeeC-CCCEEEeCC-----CCHHHHHHHHHHHHhCcccCHHHHHH
Confidence 3233343 46789999999999986433 3344555 367888853 36788999999999998 44444444
Q ss_pred HH
Q 012083 444 LK 445 (471)
Q Consensus 444 l~ 445 (471)
-+
T Consensus 337 ~~ 338 (351)
T cd03804 337 HA 338 (351)
T ss_pred HH
Confidence 33
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. |
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=98.57 E-value=0.00058 Score=67.07 Aligned_cols=85 Identities=12% Similarity=0.121 Sum_probs=59.2
Q ss_pred CCCcEEEeccch-hhhhccCcceeee--ec--cCcchhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeecCCCCC
Q 012083 343 ADFGKMVKWAPQ-EKVLAHPSVACYL--TH--CGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNG 417 (471)
Q Consensus 343 ~~nv~~~~~vpq-~~lL~~~~~~~~I--tH--gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~ 417 (471)
.+++.+.++..+ ..+++.+++ +| ++ |--+++.||+++|+|+|+... ..+...+.+ -..|..++.
T Consensus 254 ~~~v~~~g~~~~~~~~~~~adi--~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~----~g~~e~i~~-~~~g~~~~~---- 322 (374)
T TIGR03088 254 AHLVWLPGERDDVPALMQALDL--FVLPSLAEGISNTILEAMASGLPVIATAV----GGNPELVQH-GVTGALVPP---- 322 (374)
T ss_pred cceEEEcCCcCCHHHHHHhcCE--EEeccccccCchHHHHHHHcCCCEEEcCC----CCcHHHhcC-CCceEEeCC----
Confidence 345666665543 367877777 65 33 446799999999999999754 334555555 256777743
Q ss_pred CcCHhHHHHHHHHHhCcHHHHH
Q 012083 418 IIGRHEIKRKVDELLSNDVVRK 439 (471)
Q Consensus 418 ~~~~~~l~~~i~~ll~~~~~~~ 439 (471)
-+.+++.+++.++++|++.++
T Consensus 323 -~d~~~la~~i~~l~~~~~~~~ 343 (374)
T TIGR03088 323 -GDAVALARALQPYVSDPAARR 343 (374)
T ss_pred -CCHHHHHHHHHHHHhCHHHHH
Confidence 467899999999999875443
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
Probab=98.52 E-value=0.00016 Score=71.73 Aligned_cols=87 Identities=16% Similarity=0.224 Sum_probs=62.2
Q ss_pred CCCcEEEeccchh---hhhccCcceeeeec---------cCc-chhhHhhhcCCceeecccccchhhhHHHHHhhhccee
Q 012083 343 ADFGKMVKWAPQE---KVLAHPSVACYLTH---------CGW-NSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGL 409 (471)
Q Consensus 343 ~~nv~~~~~vpq~---~lL~~~~~~~~ItH---------gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~ 409 (471)
.+++.+.+|+|+. .+++.+++ +|.- -|. ++++||+++|+|+|+.... .....+.. -..|.
T Consensus 278 ~~~V~~~G~~~~~el~~~l~~aDv--~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~----g~~E~v~~-~~~G~ 350 (406)
T PRK15427 278 EDVVEMPGFKPSHEVKAMLDDADV--FLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHS----GIPELVEA-DKSGW 350 (406)
T ss_pred CCeEEEeCCCCHHHHHHHHHhCCE--EEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCC----CchhhhcC-CCceE
Confidence 4778889999976 47767776 6642 244 5789999999999987543 23344555 25677
Q ss_pred eecCCCCCCcCHhHHHHHHHHHhC-cHHHHHHH
Q 012083 410 WLEPDDNGIIGRHEIKRKVDELLS-NDVVRKNA 441 (471)
Q Consensus 410 ~~~~~~~~~~~~~~l~~~i~~ll~-~~~~~~~a 441 (471)
.++. -+.+++.++|.++++ |++.+++.
T Consensus 351 lv~~-----~d~~~la~ai~~l~~~d~~~~~~~ 378 (406)
T PRK15427 351 LVPE-----NDAQALAQRLAAFSQLDTDELAPV 378 (406)
T ss_pred EeCC-----CCHHHHHHHHHHHHhCCHHHHHHH
Confidence 7753 368999999999999 87644433
|
|
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.43 E-value=0.00017 Score=71.94 Aligned_cols=80 Identities=20% Similarity=0.175 Sum_probs=54.6
Q ss_pred CCCcEEEeccchh---hhhccCcceeeeec----cCcchhhHhhhcCCceeecccccchhhhHHHHH---hhhcceeeec
Q 012083 343 ADFGKMVKWAPQE---KVLAHPSVACYLTH----CGWNSTMEGISMGVPFLCWPWGHDHLYIKSCIC---DDWKIGLWLE 412 (471)
Q Consensus 343 ~~nv~~~~~vpq~---~lL~~~~~~~~ItH----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~---~~~G~G~~~~ 412 (471)
.++|.+.+++|+. .+|+.+++ +|+- +=..++.||+++|+|+|+.-..+. ....+. .. ..|...
T Consensus 304 ~~~V~f~g~v~~~~l~~~l~~adv--~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp---~~~iv~~~~~g-~~G~l~- 376 (419)
T cd03806 304 EDKVEFVVNAPFEELLEELSTASI--GLHTMWNEHFGIGVVEYMAAGLIPLAHASGGP---LLDIVVPWDGG-PTGFLA- 376 (419)
T ss_pred CCeEEEecCCCHHHHHHHHHhCeE--EEECCccCCcccHHHHHHHcCCcEEEEcCCCC---chheeeccCCC-CceEEe-
Confidence 5789999999875 57877776 5532 223488999999999997643221 111222 31 466654
Q ss_pred CCCCCCcCHhHHHHHHHHHhCcH
Q 012083 413 PDDNGIIGRHEIKRKVDELLSND 435 (471)
Q Consensus 413 ~~~~~~~~~~~l~~~i~~ll~~~ 435 (471)
. +.++++++|.++++++
T Consensus 377 ----~--d~~~la~ai~~ll~~~ 393 (419)
T cd03806 377 ----S--TAEEYAEAIEKILSLS 393 (419)
T ss_pred ----C--CHHHHHHHHHHHHhCC
Confidence 1 7899999999999875
|
ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. |
| >PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=98.40 E-value=0.00017 Score=72.92 Aligned_cols=215 Identities=12% Similarity=0.074 Sum_probs=114.4
Q ss_pred cCcEEEEcchhhhchhhhhhCCCcceec-cccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHH
Q 012083 230 ASDRILCTWFHELAPSANKILPSIIPVG-PLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELA 308 (471)
Q Consensus 230 ~~~~~l~~s~~~l~~~~~~~~~~~~~vG-p~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~ 308 (471)
..|.+++--++|-+.. ....-++.||| |+....+ ..+...+..+-+.-.+++++|-+--||-.+--...+..++
T Consensus 361 ~vD~ll~IfPFE~~~y-~~~gv~v~yVGHPL~d~i~----~~~~~~~~r~~lgl~~~~~iIaLLPGSR~~EI~rllPv~l 435 (608)
T PRK01021 361 YLDLLLLILPFEQNLF-KDSPLRTVYLGHPLVETIS----SFSPNLSWKEQLHLPSDKPIVAAFPGSRRGDILRNLTIQV 435 (608)
T ss_pred HhhhheecCccCHHHH-HhcCCCeEEECCcHHhhcc----cCCCHHHHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 4566676666666665 44566899999 4443321 1122222233333344567999999994333333345566
Q ss_pred HHHH--hC--CCCEEEEEcCCCCCCCCCCCCchhHHhhC-C---CcEEEeccchhhhhccCcceeeeeccCcchhhHhhh
Q 012083 309 LGLE--LA--GQPFLCGVRPGFINGSSTNNPDGLVAKVA-D---FGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEGIS 380 (471)
Q Consensus 309 ~al~--~~--~~~~i~~~~~~~~~~~~~~lp~~~~~~~~-~---nv~~~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~ 380 (471)
++.+ .. +.+|++...+. ...+.+.+... . ++.++.---..++++.+++ .+.-+|. .++|+..
T Consensus 436 ~aa~~~~l~~~l~fvvp~a~~-------~~~~~i~~~~~~~~~~~~~ii~~~~~~~~m~aaD~--aLaaSGT-aTLEaAL 505 (608)
T PRK01021 436 QAFLASSLASTHQLLVSSANP-------KYDHLILEVLQQEGCLHSHIVPSQFRYELMRECDC--ALAKCGT-IVLETAL 505 (608)
T ss_pred HHHHHHHhccCeEEEEecCch-------hhHHHHHHHHhhcCCCCeEEecCcchHHHHHhcCe--eeecCCH-HHHHHHH
Confidence 6665 33 34565543322 11111222121 1 1233210012478866666 7776665 4679999
Q ss_pred cCCceeeccc-ccchhhhHHHHHhhh----------cceeeecCCCC---CCcCHhHHHHHHHHHhCcHHHHHHHHHHHH
Q 012083 381 MGVPFLCWPW-GHDHLYIKSCICDDW----------KIGLWLEPDDN---GIIGRHEIKRKVDELLSNDVVRKNALKLKE 446 (471)
Q Consensus 381 ~GvP~l~~P~-~~DQ~~na~~v~~~~----------G~G~~~~~~~~---~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~ 446 (471)
+|+||+++=- ..=-...|+++.+ . =+|..+-++-- +..|++.|.+++ ++|.|++++++.++==+
T Consensus 506 ~g~PmVV~YK~s~Lty~Iak~Lvk-i~i~yIsLpNIIagr~VvPEllqgQ~~~tpe~La~~l-~lL~d~~~r~~~~~~l~ 583 (608)
T PRK01021 506 NQTPTIVTCQLRPFDTFLAKYIFK-IILPAYSLPNIILGSTIFPEFIGGKKDFQPEEVAAAL-DILKTSQSKEKQKDACR 583 (608)
T ss_pred hCCCEEEEEecCHHHHHHHHHHHh-ccCCeeehhHHhcCCCcchhhcCCcccCCHHHHHHHH-HHhcCHHHHHHHHHHHH
Confidence 9999988521 1111223344333 1 12333333212 578999999997 88888866666666555
Q ss_pred HHHHHhhcCCChHHH
Q 012083 447 LAQKSVTKEGSSSKN 461 (471)
Q Consensus 447 ~~~~~~~~gg~~~~~ 461 (471)
++++.+.+|.+.-+.
T Consensus 584 ~lr~~Lg~~~~~~~~ 598 (608)
T PRK01021 584 DLYQAMNESASTMKE 598 (608)
T ss_pred HHHHHhcCCCCCHHH
Confidence 666655445544443
|
|
| >PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.36 E-value=0.00015 Score=70.08 Aligned_cols=216 Identities=19% Similarity=0.149 Sum_probs=120.5
Q ss_pred cCcEEEEcchhhhchhhhhhCCCcceec-cccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHH
Q 012083 230 ASDRILCTWFHELAPSANKILPSIIPVG-PLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELA 308 (471)
Q Consensus 230 ~~~~~l~~s~~~l~~~~~~~~~~~~~vG-p~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~ 308 (471)
..|.+++-.++|-++. ....-++.||| |+..... .........+.+ -.+++++|.+--||-.+--...+..++
T Consensus 133 ~~D~ll~ifPFE~~~y-~~~g~~~~~VGHPl~d~~~----~~~~~~~~~~~~-l~~~~~iIaLLPGSR~~EI~rllP~~l 206 (373)
T PF02684_consen 133 YVDHLLVIFPFEPEFY-KKHGVPVTYVGHPLLDEVK----PEPDRAEAREKL-LDPDKPIIALLPGSRKSEIKRLLPIFL 206 (373)
T ss_pred HHhheeECCcccHHHH-hccCCCeEEECCcchhhhc----cCCCHHHHHHhc-CCCCCcEEEEeCCCCHHHHHHHHHHHH
Confidence 4566777766666655 44445799999 5443322 112222222333 234466999999994332222334445
Q ss_pred HHHHh-----CCCCEEEEEcCCCCCCCCCCCCc---hhHHhhCCCcEEEec-cchhhhhccCcceeeeeccCcchhhHhh
Q 012083 309 LGLEL-----AGQPFLCGVRPGFINGSSTNNPD---GLVAKVADFGKMVKW-APQEKVLAHPSVACYLTHCGWNSTMEGI 379 (471)
Q Consensus 309 ~al~~-----~~~~~i~~~~~~~~~~~~~~lp~---~~~~~~~~nv~~~~~-vpq~~lL~~~~~~~~ItHgG~~s~~eal 379 (471)
++.+. .+.+|++.+... .... ........++.+.-. -.-.++|+.+++ .+.-.|. .|+|+.
T Consensus 207 ~aa~~l~~~~p~l~fvvp~a~~-------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~m~~ad~--al~~SGT-aTLE~A 276 (373)
T PF02684_consen 207 EAAKLLKKQRPDLQFVVPVAPE-------VHEELIEEILAEYPPDVSIVIIEGESYDAMAAADA--ALAASGT-ATLEAA 276 (373)
T ss_pred HHHHHHHHhCCCeEEEEecCCH-------HHHHHHHHHHHhhCCCCeEEEcCCchHHHHHhCcc--hhhcCCH-HHHHHH
Confidence 55432 234566554332 1111 111112333333322 233467766666 5555554 578999
Q ss_pred hcCCceeeccc-ccchhhhHHHHHhhhc--------ceeeecCCC-CCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHHHH
Q 012083 380 SMGVPFLCWPW-GHDHLYIKSCICDDWK--------IGLWLEPDD-NGIIGRHEIKRKVDELLSNDVVRKNALKLKELAQ 449 (471)
Q Consensus 380 ~~GvP~l~~P~-~~DQ~~na~~v~~~~G--------~G~~~~~~~-~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~ 449 (471)
.+|+|||++=- ..=....|+++.+ .. +|..+-++- .+..|++.|.+++..+|.|++.++..+...+.++
T Consensus 277 l~g~P~Vv~Yk~~~lt~~iak~lvk-~~~isL~Niia~~~v~PEliQ~~~~~~~i~~~~~~ll~~~~~~~~~~~~~~~~~ 355 (373)
T PF02684_consen 277 LLGVPMVVAYKVSPLTYFIAKRLVK-VKYISLPNIIAGREVVPELIQEDATPENIAAELLELLENPEKRKKQKELFREIR 355 (373)
T ss_pred HhCCCEEEEEcCcHHHHHHHHHhhc-CCEeechhhhcCCCcchhhhcccCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 99999988621 1122334444433 22 111221111 3678999999999999999988888888888888
Q ss_pred HHhhcCCChHHHH
Q 012083 450 KSVTKEGSSSKNL 462 (471)
Q Consensus 450 ~~~~~gg~~~~~~ 462 (471)
+..+.|.++....
T Consensus 356 ~~~~~~~~~~~~~ 368 (373)
T PF02684_consen 356 QLLGPGASSRAAQ 368 (373)
T ss_pred HhhhhccCCHHHH
Confidence 8877777766544
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process |
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=98.32 E-value=0.0012 Score=69.28 Aligned_cols=93 Identities=14% Similarity=0.133 Sum_probs=62.1
Q ss_pred CCCcEEEeccchh-hhhccCcceeeee---ccC-cchhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeecCCCCC
Q 012083 343 ADFGKMVKWAPQE-KVLAHPSVACYLT---HCG-WNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNG 417 (471)
Q Consensus 343 ~~nv~~~~~vpq~-~lL~~~~~~~~It---HgG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~ 417 (471)
.++|.+.+|.+.. .+++..++ ||. +.| -+++.||+.+|+|+|+.... .....+.+. ..|..+++ +
T Consensus 573 ~~~V~flG~~~dv~~ll~aaDv--~VlpS~~Egfp~vlLEAMA~G~PVVat~~g----G~~EiV~dg-~~GlLv~~---~ 642 (694)
T PRK15179 573 GERILFTGLSRRVGYWLTQFNA--FLLLSRFEGLPNVLIEAQFSGVPVVTTLAG----GAGEAVQEG-VTGLTLPA---D 642 (694)
T ss_pred CCcEEEcCCcchHHHHHHhcCE--EEeccccccchHHHHHHHHcCCeEEEECCC----ChHHHccCC-CCEEEeCC---C
Confidence 4778888988754 67866666 554 344 56899999999999997542 344455552 46888865 4
Q ss_pred CcCHhHHHHHHHHHh----CcHHHHHHHHHHH
Q 012083 418 IIGRHEIKRKVDELL----SNDVVRKNALKLK 445 (471)
Q Consensus 418 ~~~~~~l~~~i~~ll----~~~~~~~~a~~l~ 445 (471)
..+.+++.+++.+++ .++.+++++++..
T Consensus 643 d~~~~~La~aL~~ll~~l~~~~~l~~~ar~~a 674 (694)
T PRK15179 643 TVTAPDVAEALARIHDMCAADPGIARKAADWA 674 (694)
T ss_pred CCChHHHHHHHHHHHhChhccHHHHHHHHHHH
Confidence 445556666665554 4567777665554
|
|
| >KOG3349 consensus Predicted glycosyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.32 E-value=3.4e-06 Score=67.80 Aligned_cols=116 Identities=13% Similarity=0.199 Sum_probs=77.8
Q ss_pred cEEEEecCccccCCHHHH-----HHHHHHHHhCCC-CEEEEEcCCCCCCCCCCCCchhHHhhC-CCcE--EEeccch-hh
Q 012083 287 SVIYAAFGSISKLSQQQF-----NELALGLELAGQ-PFLCGVRPGFINGSSTNNPDGLVAKVA-DFGK--MVKWAPQ-EK 356 (471)
Q Consensus 287 ~vv~vs~GS~~~~~~~~~-----~~~~~al~~~~~-~~i~~~~~~~~~~~~~~lp~~~~~~~~-~nv~--~~~~vpq-~~ 356 (471)
..+||+-||.. ++ +.+ ....+.+.+.|. +.++..+++ ....++.+..... +... ..+|-|- .+
T Consensus 4 ~~vFVTVGtT~-Fd-~LI~~Vl~~~~~~~L~k~G~~kLiiQ~Grg-----~~~~~d~~~~~~k~~gl~id~y~f~psl~e 76 (170)
T KOG3349|consen 4 MTVFVTVGTTS-FD-DLISCVLSEEFLQELQKRGFTKLIIQIGRG-----QPFFGDPIDLIRKNGGLTIDGYDFSPSLTE 76 (170)
T ss_pred eEEEEEecccc-HH-HHHHHHcCHHHHHHHHHcCccEEEEEecCC-----ccCCCCHHHhhcccCCeEEEEEecCccHHH
Confidence 38999999954 22 221 235566677776 667777765 1233333322221 1122 2378886 45
Q ss_pred hhccCcceeeeeccCcchhhHhhhcCCceeeccc----ccchhhhHHHHHhhhcceeeec
Q 012083 357 VLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPW----GHDHLYIKSCICDDWKIGLWLE 412 (471)
Q Consensus 357 lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~----~~DQ~~na~~v~~~~G~G~~~~ 412 (471)
..+.+++ +|+|+|.||++|.|..|+|.++++. -..|-.-|..+++ .|.=..-.
T Consensus 77 ~I~~Adl--VIsHAGaGS~letL~l~KPlivVvNd~LMDNHQ~ELA~qL~~-egyL~~C~ 133 (170)
T KOG3349|consen 77 DIRSADL--VISHAGAGSCLETLRLGKPLIVVVNDSLMDNHQLELAKQLAE-EGYLYYCT 133 (170)
T ss_pred HHhhccE--EEecCCcchHHHHHHcCCCEEEEeChHhhhhHHHHHHHHHHh-cCcEEEee
Confidence 6655665 9999999999999999999999996 4579999999999 58665553
|
|
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=98.31 E-value=0.00033 Score=70.97 Aligned_cols=131 Identities=11% Similarity=0.130 Sum_probs=70.7
Q ss_pred cEEEEecCccccCCHHHHHHHHHHHH---hCCCCEEEEEcCCCCCCCCCCCCch---hHHhhCCCcEE-Eeccchh--hh
Q 012083 287 SVIYAAFGSISKLSQQQFNELALGLE---LAGQPFLCGVRPGFINGSSTNNPDG---LVAKVADFGKM-VKWAPQE--KV 357 (471)
Q Consensus 287 ~vv~vs~GS~~~~~~~~~~~~~~al~---~~~~~~i~~~~~~~~~~~~~~lp~~---~~~~~~~nv~~-~~~vpq~--~l 357 (471)
..+++..|.+.. ...+..++++++ +.+.++++.-.+. ....+. +.++.+.++.+ .+|-... .+
T Consensus 282 ~~~i~~vGRl~~--~KG~~~li~a~~~l~~~~~~lvivG~g~------~~~~~~l~~l~~~~~~~v~~~~g~~~~~~~~~ 353 (466)
T PRK00654 282 APLFAMVSRLTE--QKGLDLVLEALPELLEQGGQLVLLGTGD------PELEEAFRALAARYPGKVGVQIGYDEALAHRI 353 (466)
T ss_pred CcEEEEeecccc--ccChHHHHHHHHHHHhcCCEEEEEecCc------HHHHHHHHHHHHHCCCcEEEEEeCCHHHHHHH
Confidence 356666677532 222334444443 2356666553221 011111 22233566654 3663222 56
Q ss_pred hccCcceeeeec---cCcc-hhhHhhhcCCceeeccccc--chhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHH
Q 012083 358 LAHPSVACYLTH---CGWN-STMEGISMGVPFLCWPWGH--DHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDEL 431 (471)
Q Consensus 358 L~~~~~~~~ItH---gG~~-s~~eal~~GvP~l~~P~~~--DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~l 431 (471)
++.+++ +|.- -|+| +.+||+++|+|.|+....+ |...+...-.+ -+-|..+++ -+.+++.++|.++
T Consensus 354 ~~~aDv--~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~-~~~G~lv~~-----~d~~~la~~i~~~ 425 (466)
T PRK00654 354 YAGADM--FLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDG-EATGFVFDD-----FNAEDLLRALRRA 425 (466)
T ss_pred HhhCCE--EEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCC-CCceEEeCC-----CCHHHHHHHHHHH
Confidence 766776 6643 3444 8899999999999875422 22111101022 167888854 4778999999998
Q ss_pred hC
Q 012083 432 LS 433 (471)
Q Consensus 432 l~ 433 (471)
++
T Consensus 426 l~ 427 (466)
T PRK00654 426 LE 427 (466)
T ss_pred HH
Confidence 86
|
|
| >PLN00142 sucrose synthase | Back alignment and domain information |
|---|
Probab=98.27 E-value=0.0013 Score=69.38 Aligned_cols=71 Identities=13% Similarity=0.185 Sum_probs=47.1
Q ss_pred eeeec---cCcc-hhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHH----HhCcHH
Q 012083 365 CYLTH---CGWN-STMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDE----LLSNDV 436 (471)
Q Consensus 365 ~~ItH---gG~~-s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~----ll~~~~ 436 (471)
+||.- -|.| ++.||+++|+|+|+... ......+... .-|..+++ -+.++++++|.+ ++.|++
T Consensus 669 VfVlPS~~EgFGLvvLEAMA~GlPVVATdv----GG~~EIV~dG-~tG~LV~P-----~D~eaLA~aI~~lLekLl~Dp~ 738 (815)
T PLN00142 669 AFVQPALYEAFGLTVVEAMTCGLPTFATCQ----GGPAEIIVDG-VSGFHIDP-----YHGDEAANKIADFFEKCKEDPS 738 (815)
T ss_pred EEEeCCcccCCCHHHHHHHHcCCCEEEcCC----CCHHHHhcCC-CcEEEeCC-----CCHHHHHHHHHHHHHHhcCCHH
Confidence 36653 4444 89999999999988644 3345555552 46888864 366777777765 457887
Q ss_pred HHHHHHHHH
Q 012083 437 VRKNALKLK 445 (471)
Q Consensus 437 ~~~~a~~l~ 445 (471)
.+++..+-+
T Consensus 739 lr~~mg~~A 747 (815)
T PLN00142 739 YWNKISDAG 747 (815)
T ss_pred HHHHHHHHH
Confidence 666555443
|
|
| >cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=98.25 E-value=0.0017 Score=63.86 Aligned_cols=180 Identities=16% Similarity=0.087 Sum_probs=90.8
Q ss_pred hccCcEEEEcchhhhchhhhhhCCCcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCcccc-CCHHHHHH
Q 012083 228 IEASDRILCTWFHELAPSANKILPSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISK-LSQQQFNE 306 (471)
Q Consensus 228 ~~~~~~~l~~s~~~l~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~-~~~~~~~~ 306 (471)
+..+|.++..|....+.- ....++++.++.-.............. .. +.+...+ ..+++..|++.. ...+.+..
T Consensus 151 ~~~ad~vi~~S~~l~~~~-~~~~~~i~~i~ngvd~~~f~~~~~~~~-~~-~~~~~~~--~~~i~y~G~l~~~~d~~ll~~ 225 (373)
T cd04950 151 LKRADLVFTTSPSLYEAK-RRLNPNVVLVPNGVDYEHFAAARDPPP-PP-ADLAALP--RPVIGYYGAIAEWLDLELLEA 225 (373)
T ss_pred HHhCCEEEECCHHHHHHH-hhCCCCEEEcccccCHHHhhcccccCC-Ch-hHHhcCC--CCEEEEEeccccccCHHHHHH
Confidence 468999988877655432 333355655543222110000000000 00 1111122 245556788753 23333333
Q ss_pred HHHHHHhCCCCEEEEEcCCCCCCCCCCCCchhHHhhCCCcEEEeccchh---hhhccCcceeee------eccCc-chhh
Q 012083 307 LALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQE---KVLAHPSVACYL------THCGW-NSTM 376 (471)
Q Consensus 307 ~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~---~lL~~~~~~~~I------tHgG~-~s~~ 376 (471)
++. ...+.++++.-.+. ..... ..+ ...+||.+.+++|+. ..+++.++.++- +.++. +.+.
T Consensus 226 la~--~~p~~~~vliG~~~----~~~~~-~~~--~~~~nV~~~G~~~~~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~ 296 (373)
T cd04950 226 LAK--ARPDWSFVLIGPVD----VSIDP-SAL--LRLPNVHYLGPKPYKELPAYLAGFDVAILPFRLNELTRATSPLKLF 296 (373)
T ss_pred HHH--HCCCCEEEEECCCc----CccCh-hHh--ccCCCEEEeCCCCHHHHHHHHHhCCEEecCCccchhhhcCCcchHH
Confidence 332 12345555433321 00000 010 114789999999965 467777773332 22332 4589
Q ss_pred HhhhcCCceeecccccchhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcH
Q 012083 377 EGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSND 435 (471)
Q Consensus 377 eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~ 435 (471)
|++++|+|+|+.++ ...+.. .+ |..+.. -+.+++.++|.+++.++
T Consensus 297 EylA~G~PVVat~~-------~~~~~~-~~-~~~~~~-----~d~~~~~~ai~~~l~~~ 341 (373)
T cd04950 297 EYLAAGKPVVATPL-------PEVRRY-ED-EVVLIA-----DDPEEFVAAIEKALLED 341 (373)
T ss_pred HHhccCCCEEecCc-------HHHHhh-cC-cEEEeC-----CCHHHHHHHHHHHHhcC
Confidence 99999999998763 222233 23 333321 27899999999977554
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >PLN02501 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=98.25 E-value=0.00046 Score=70.57 Aligned_cols=78 Identities=17% Similarity=0.135 Sum_probs=52.2
Q ss_pred CcEEEeccchh-hhhccCcceeeeecc----CcchhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeecCCCCCCc
Q 012083 345 FGKMVKWAPQE-KVLAHPSVACYLTHC----GWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGII 419 (471)
Q Consensus 345 nv~~~~~vpq~-~lL~~~~~~~~ItHg----G~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~ 419 (471)
++.+.++.++. .+++..++ ||.-+ =.++++||+++|+|+|+.-..+... +.. |.+..+. -
T Consensus 602 ~V~FLG~~dd~~~lyasaDV--FVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~e~-----V~~--g~nGll~------~ 666 (794)
T PLN02501 602 NLNFLKGRDHADDSLHGYKV--FINPSISDVLCTATAEALAMGKFVVCADHPSNEF-----FRS--FPNCLTY------K 666 (794)
T ss_pred EEEecCCCCCHHHHHHhCCE--EEECCCcccchHHHHHHHHcCCCEEEecCCCCce-----Eee--cCCeEec------C
Confidence 35555666654 47866666 77532 2568999999999999986654221 222 3333332 2
Q ss_pred CHhHHHHHHHHHhCcHHH
Q 012083 420 GRHEIKRKVDELLSNDVV 437 (471)
Q Consensus 420 ~~~~l~~~i~~ll~~~~~ 437 (471)
+.+++.++|.++|.|+..
T Consensus 667 D~EafAeAI~~LLsd~~~ 684 (794)
T PLN02501 667 TSEDFVAKVKEALANEPQ 684 (794)
T ss_pred CHHHHHHHHHHHHhCchh
Confidence 679999999999998753
|
|
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type | Back alignment and domain information |
|---|
Probab=98.25 E-value=0.00022 Score=72.47 Aligned_cols=84 Identities=10% Similarity=0.045 Sum_probs=53.0
Q ss_pred hCCCcEEEeccchh---hhhccCcceeeeecc---Ccc-hhhHhhhcCCceeeccccc--chhhhHHHHHhhhcceeeec
Q 012083 342 VADFGKMVKWAPQE---KVLAHPSVACYLTHC---GWN-STMEGISMGVPFLCWPWGH--DHLYIKSCICDDWKIGLWLE 412 (471)
Q Consensus 342 ~~~nv~~~~~vpq~---~lL~~~~~~~~ItHg---G~~-s~~eal~~GvP~l~~P~~~--DQ~~na~~v~~~~G~G~~~~ 412 (471)
.+.++.+....+.. .+++.+++ +|.-. |.| +.+||+++|+|+|+....+ |...+...-.. -+.|..++
T Consensus 344 ~~~~v~~~~~~~~~~~~~~~~~aDv--~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~~~-~~~G~l~~ 420 (473)
T TIGR02095 344 YPGNVRVIIGYDEALAHLIYAGADF--ILMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPEAE-SGTGFLFE 420 (473)
T ss_pred CCCcEEEEEcCCHHHHHHHHHhCCE--EEeCCCcCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCCCC-CCceEEeC
Confidence 45667666555543 47766666 66432 443 7889999999999875432 22211100012 16788885
Q ss_pred CCCCCCcCHhHHHHHHHHHhC
Q 012083 413 PDDNGIIGRHEIKRKVDELLS 433 (471)
Q Consensus 413 ~~~~~~~~~~~l~~~i~~ll~ 433 (471)
. -+.+++.++|.+++.
T Consensus 421 ~-----~d~~~la~~i~~~l~ 436 (473)
T TIGR02095 421 E-----YDPGALLAALSRALR 436 (473)
T ss_pred C-----CCHHHHHHHHHHHHH
Confidence 3 478899999999987
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. |
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.23 E-value=0.00063 Score=69.27 Aligned_cols=84 Identities=11% Similarity=0.005 Sum_probs=51.9
Q ss_pred CCCcEEEeccchh---hhhccCcceeeeec---cCc-chhhHhhhcCCceeeccccc--chhhhHHHHHhhhcceeeecC
Q 012083 343 ADFGKMVKWAPQE---KVLAHPSVACYLTH---CGW-NSTMEGISMGVPFLCWPWGH--DHLYIKSCICDDWKIGLWLEP 413 (471)
Q Consensus 343 ~~nv~~~~~vpq~---~lL~~~~~~~~ItH---gG~-~s~~eal~~GvP~l~~P~~~--DQ~~na~~v~~~~G~G~~~~~ 413 (471)
++|+.+..-.++. .+++.+++ ++.. -|. .+.+||+++|+|+|+....+ |...+...-.+ -|.|..+++
T Consensus 350 ~~~v~~~~~~~~~~~~~~~~~aDv--~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~-~~~G~~~~~ 426 (476)
T cd03791 350 PGRVAVLIGYDEALAHLIYAGADF--FLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTG-EGTGFVFEG 426 (476)
T ss_pred CCcEEEEEeCCHHHHHHHHHhCCE--EECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCC-CCCeEEeCC
Confidence 5677765333333 46766666 6643 122 47899999999999765432 22211111113 257888854
Q ss_pred CCCCCcCHhHHHHHHHHHhCc
Q 012083 414 DDNGIIGRHEIKRKVDELLSN 434 (471)
Q Consensus 414 ~~~~~~~~~~l~~~i~~ll~~ 434 (471)
-+.+++.+++.+++++
T Consensus 427 -----~~~~~l~~~i~~~l~~ 442 (476)
T cd03791 427 -----YNADALLAALRRALAL 442 (476)
T ss_pred -----CCHHHHHHHHHHHHHH
Confidence 4689999999998863
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| >COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.10 E-value=0.00066 Score=64.29 Aligned_cols=347 Identities=15% Similarity=0.106 Sum_probs=175.0
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCC-Cccc
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPED-DRKD 96 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~ 96 (471)
+||.++..-..|++.- -.|.++|.++=-+|.|++-.. +..++. |++- + ++..+ ....
T Consensus 2 ~ki~i~AGE~SGDllG-a~LikaLk~~~~~~efvGvgG--~~m~ae--------------G~~s--l---~~~~elsvmG 59 (381)
T COG0763 2 LKIALSAGEASGDLLG-AGLIKALKARYPDVEFVGVGG--EKMEAE--------------GLES--L---FDMEELSVMG 59 (381)
T ss_pred ceEEEEecccchhhHH-HHHHHHHHhhCCCeEEEEecc--HHHHhc--------------cCcc--c---cCHHHHHHhh
Confidence 7899999888888764 467788887633777776632 334444 3111 1 00000 1112
Q ss_pred HHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEE-ECCCcc--hHHHHHHHcC--CceEEEeCchHHHHHHHhchhhh
Q 012083 97 EAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVI-ADVTFG--WALQVAAKLE--LKKASIYTSAPGILAMIMNIPKF 171 (471)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV-~D~~~~--~~~~~A~~lg--iP~v~~~~~~~~~~~~~~~~p~~ 171 (471)
+.+-+..+. ......+++++.+.. .+||++| +|...+ -...-.++.| +|.|-+..
T Consensus 60 f~EVL~~lp-~llk~~~~~~~~i~~----~kpD~~i~IDsPdFnl~vak~lrk~~p~i~iihYV~--------------- 119 (381)
T COG0763 60 FVEVLGRLP-RLLKIRRELVRYILA----NKPDVLILIDSPDFNLRVAKKLRKAGPKIKIIHYVS--------------- 119 (381)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHh----cCCCEEEEeCCCCCchHHHHHHHHhCCCCCeEEEEC---------------
Confidence 222222211 122234555555555 8999987 565433 2233345666 88877532
Q ss_pred hhhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhchhhhhhCC
Q 012083 172 IEAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSANKILP 251 (471)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~ 251 (471)
|..+ .|- .+... ......|.++.--++|-++. ....-
T Consensus 120 ---------------------PsVW---------AWr--~~Ra~----------~i~~~~D~lLailPFE~~~y-~k~g~ 156 (381)
T COG0763 120 ---------------------PSVW---------AWR--PKRAV----------KIAKYVDHLLAILPFEPAFY-DKFGL 156 (381)
T ss_pred ---------------------ccee---------eec--hhhHH----------HHHHHhhHeeeecCCCHHHH-HhcCC
Confidence 1111 110 00011 11235666666666665554 23333
Q ss_pred Ccceec-cccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHHHHhC-----CCCEEEEEcCC
Q 012083 252 SIIPVG-PLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELA-----GQPFLCGVRPG 325 (471)
Q Consensus 252 ~~~~vG-p~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~ 325 (471)
+.+||| |+....+ ..+....+.+-+....+++++.+--||-.+--...+..+.++..++ +.+|++-+...
T Consensus 157 ~~~yVGHpl~d~i~----~~~~r~~ar~~l~~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~~vlp~~~~ 232 (381)
T COG0763 157 PCTYVGHPLADEIP----LLPDREAAREKLGIDADEKTLALLPGSRRSEIRRLLPPFVQAAQELKARYPDLKFVLPLVNA 232 (381)
T ss_pred CeEEeCChhhhhcc----ccccHHHHHHHhCCCCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCceEEEecCcH
Confidence 489999 4433321 2233333445555555667999999995432233333344444332 35777665433
Q ss_pred CCCCCCCCCCchhHHhhCCCc-EEEeccc-h--hhhhccCcceeeeeccCcchhhHhhhcCCceeecccccc--hhhhHH
Q 012083 326 FINGSSTNNPDGLVAKVADFG-KMVKWAP-Q--EKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHD--HLYIKS 399 (471)
Q Consensus 326 ~~~~~~~~lp~~~~~~~~~nv-~~~~~vp-q--~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~D--Q~~na~ 399 (471)
....+-..+. ..+. ...-++. + ...+..+++ .+.-+|.. ++|+..+|+|||+.= -.+ -...|.
T Consensus 233 ----~~~~~~~~~~---~~~~~~~~~~~~~~~~~~a~~~aD~--al~aSGT~-tLE~aL~g~P~Vv~Y-k~~~it~~iak 301 (381)
T COG0763 233 ----KYRRIIEEAL---KWEVAGLSLILIDGEKRKAFAAADA--ALAASGTA-TLEAALAGTPMVVAY-KVKPITYFIAK 301 (381)
T ss_pred ----HHHHHHHHHh---hccccCceEEecCchHHHHHHHhhH--HHHhccHH-HHHHHHhCCCEEEEE-eccHHHHHHHH
Confidence 0001111111 1111 1222222 2 235644555 66666654 579999999998762 111 111233
Q ss_pred HHHhhhc--------ceeeecCCC-CCCcCHhHHHHHHHHHhCcH----HHHHHHHHHHHHHHHHhhcCCChHHHHHHHH
Q 012083 400 CICDDWK--------IGLWLEPDD-NGIIGRHEIKRKVDELLSND----VVRKNALKLKELAQKSVTKEGSSSKNLEYFI 466 (471)
Q Consensus 400 ~v~~~~G--------~G~~~~~~~-~~~~~~~~l~~~i~~ll~~~----~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~ 466 (471)
+... .. +|..+-++- ....+++.|.+++..++.|+ .+++..++|.+.++ .++++..+.+.++
T Consensus 302 ~lvk-~~yisLpNIi~~~~ivPEliq~~~~pe~la~~l~~ll~~~~~~~~~~~~~~~l~~~l~----~~~~~e~aA~~vl 376 (381)
T COG0763 302 RLVK-LPYVSLPNILAGREIVPELIQEDCTPENLARALEELLLNGDRREALKEKFRELHQYLR----EDPASEIAAQAVL 376 (381)
T ss_pred Hhcc-CCcccchHHhcCCccchHHHhhhcCHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHc----CCcHHHHHHHHHH
Confidence 3222 12 121222110 35688999999999999998 45555555555554 3556666666555
Q ss_pred HHH
Q 012083 467 KQI 469 (471)
Q Consensus 467 ~~~ 469 (471)
+.+
T Consensus 377 ~~~ 379 (381)
T COG0763 377 ELL 379 (381)
T ss_pred HHh
Confidence 544
|
|
| >TIGR02918 accessory Sec system glycosylation protein GtfA | Back alignment and domain information |
|---|
Probab=98.06 E-value=0.0017 Score=66.10 Aligned_cols=87 Identities=17% Similarity=0.195 Sum_probs=57.2
Q ss_pred CCCcEEEeccchhhhhccCcceeeee---ccC-cchhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeecCCC--C
Q 012083 343 ADFGKMVKWAPQEKVLAHPSVACYLT---HCG-WNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDD--N 416 (471)
Q Consensus 343 ~~nv~~~~~vpq~~lL~~~~~~~~It---HgG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~--~ 416 (471)
.++|.+.++.+...+++.+++ +|. .-| ..+++||+++|+|+|+.-... .+...+.. -.-|..++.+. .
T Consensus 375 ~~~V~f~G~~~~~~~~~~adv--~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~---G~~eiI~~-g~nG~lv~~~~~~~ 448 (500)
T TIGR02918 375 QDYIHLKGHRNLSEVYKDYEL--YLSASTSEGFGLTLMEAVGSGLGMIGFDVNY---GNPTFIED-NKNGYLIPIDEEED 448 (500)
T ss_pred CCeEEEcCCCCHHHHHHhCCE--EEEcCccccccHHHHHHHHhCCCEEEecCCC---CCHHHccC-CCCEEEEeCCcccc
Confidence 466788888887788977777 664 233 468999999999999974321 23334444 24577665210 0
Q ss_pred CCcC-HhHHHHHHHHHhCcH
Q 012083 417 GIIG-RHEIKRKVDELLSND 435 (471)
Q Consensus 417 ~~~~-~~~l~~~i~~ll~~~ 435 (471)
..-+ .++++++|.++++++
T Consensus 449 d~~~~~~~la~~I~~ll~~~ 468 (500)
T TIGR02918 449 DEDQIITALAEKIVEYFNSN 468 (500)
T ss_pred chhHHHHHHHHHHHHHhChH
Confidence 0112 688999999999654
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. |
| >PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A | Back alignment and domain information |
|---|
Probab=98.06 E-value=0.0001 Score=72.53 Aligned_cols=144 Identities=17% Similarity=0.142 Sum_probs=83.9
Q ss_pred CCcEEEEecCccccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCCchhHHhh------CCCcEEEeccchhhhh
Q 012083 285 PGSVIYAAFGSISKLSQQQFNELALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAKV------ADFGKMVKWAPQEKVL 358 (471)
Q Consensus 285 ~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~------~~nv~~~~~vpq~~lL 358 (471)
+..++|.||.+....+++.+..-.+.|++.+...+|...... .-...+.+.. ++++.+.++.|+.+-|
T Consensus 283 ~d~vvF~~fn~~~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~------~~~~~l~~~~~~~Gv~~~Ri~f~~~~~~~ehl 356 (468)
T PF13844_consen 283 EDAVVFGSFNNLFKISPETLDLWARILKAVPNSRLWLLRFPA------SGEARLRRRFAAHGVDPDRIIFSPVAPREEHL 356 (468)
T ss_dssp SSSEEEEE-S-GGG--HHHHHHHHHHHHHSTTEEEEEEETST------THHHHHHHHHHHTTS-GGGEEEEE---HHHHH
T ss_pred CCceEEEecCccccCCHHHHHHHHHHHHhCCCcEEEEeeCCH------HHHHHHHHHHHHcCCChhhEEEcCCCCHHHHH
Confidence 345999999999999999999999999999998898876431 0011222211 5777778888865433
Q ss_pred c-cCcceeee---eccCcchhhHhhhcCCceeecccc-cchhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhC
Q 012083 359 A-HPSVACYL---THCGWNSTMEGISMGVPFLCWPWG-HDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLS 433 (471)
Q Consensus 359 ~-~~~~~~~I---tHgG~~s~~eal~~GvP~l~~P~~-~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~ 433 (471)
. +..+++++ ..+|.+|++|||++|||+|.+|-. .=...-|..+.. +|+.-.+-. +.++-.+..-++-+
T Consensus 357 ~~~~~~DI~LDT~p~nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~-lGl~ElIA~------s~~eYv~~Av~La~ 429 (468)
T PF13844_consen 357 RRYQLADICLDTFPYNGGTTTLDALWMGVPVVTLPGETMASRVGASILRA-LGLPELIAD------SEEEYVEIAVRLAT 429 (468)
T ss_dssp HHGGG-SEEE--SSS--SHHHHHHHHHT--EEB---SSGGGSHHHHHHHH-HT-GGGB-S------SHHHHHHHHHHHHH
T ss_pred HHhhhCCEEeeCCCCCCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHH-cCCchhcCC------CHHHHHHHHHHHhC
Confidence 2 22233344 568999999999999999999953 233445556666 788887753 55666666667777
Q ss_pred cHHHHHHH
Q 012083 434 NDVVRKNA 441 (471)
Q Consensus 434 ~~~~~~~a 441 (471)
|++++++.
T Consensus 430 D~~~l~~l 437 (468)
T PF13844_consen 430 DPERLRAL 437 (468)
T ss_dssp -HHHHHHH
T ss_pred CHHHHHHH
Confidence 87655443
|
|
| >PLN02949 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=97.98 E-value=0.026 Score=56.89 Aligned_cols=83 Identities=14% Similarity=0.087 Sum_probs=52.8
Q ss_pred CCCcEEEeccchh---hhhccCcceeeee---ccCcc-hhhHhhhcCCceeecccccchhhhHHHHHh-hhc-ceeeecC
Q 012083 343 ADFGKMVKWAPQE---KVLAHPSVACYLT---HCGWN-STMEGISMGVPFLCWPWGHDHLYIKSCICD-DWK-IGLWLEP 413 (471)
Q Consensus 343 ~~nv~~~~~vpq~---~lL~~~~~~~~It---HgG~~-s~~eal~~GvP~l~~P~~~DQ~~na~~v~~-~~G-~G~~~~~ 413 (471)
.++|.+.+++|+. .+|+.+++ +|+ +-|.| ++.||+++|+|+|+....+-- ...+.+ .-| .|...
T Consensus 334 ~~~V~f~g~v~~~el~~ll~~a~~--~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~---~eIV~~~~~g~tG~l~-- 406 (463)
T PLN02949 334 DGDVEFHKNVSYRDLVRLLGGAVA--GLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPK---MDIVLDEDGQQTGFLA-- 406 (463)
T ss_pred CCcEEEeCCCCHHHHHHHHHhCcE--EEeCCccCCCChHHHHHHHcCCcEEEeCCCCCc---ceeeecCCCCcccccC--
Confidence 5789999999865 46766766 663 23333 799999999999998643200 000111 001 23222
Q ss_pred CCCCCcCHhHHHHHHHHHhCc-HHH
Q 012083 414 DDNGIIGRHEIKRKVDELLSN-DVV 437 (471)
Q Consensus 414 ~~~~~~~~~~l~~~i~~ll~~-~~~ 437 (471)
-+.++++++|.+++++ ++.
T Consensus 407 -----~~~~~la~ai~~ll~~~~~~ 426 (463)
T PLN02949 407 -----TTVEEYADAILEVLRMRETE 426 (463)
T ss_pred -----CCHHHHHHHHHHHHhCCHHH
Confidence 1779999999999984 443
|
|
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
Probab=97.90 E-value=0.043 Score=59.73 Aligned_cols=84 Identities=10% Similarity=0.032 Sum_probs=51.6
Q ss_pred CCCcEEEeccchh---hhhccCcceeeeecc---C-cchhhHhhhcCCceeeccccc--chhhh-------HHHHHhhhc
Q 012083 343 ADFGKMVKWAPQE---KVLAHPSVACYLTHC---G-WNSTMEGISMGVPFLCWPWGH--DHLYI-------KSCICDDWK 406 (471)
Q Consensus 343 ~~nv~~~~~vpq~---~lL~~~~~~~~ItHg---G-~~s~~eal~~GvP~l~~P~~~--DQ~~n-------a~~v~~~~G 406 (471)
++++.+....+.. .+++.+++ |+.-. | -.+.+||+++|+|.|+....+ |.... ++.... -+
T Consensus 899 ~~rV~f~g~~de~lah~iyaaADi--flmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~-~~ 975 (1036)
T PLN02316 899 HDRARLCLTYDEPLSHLIYAGADF--ILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGL-EP 975 (1036)
T ss_pred CCeEEEEecCCHHHHHHHHHhCcE--EEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhcccccccccccccccc-CC
Confidence 4567666444443 57755655 77532 2 458999999999888765432 22211 110001 14
Q ss_pred ceeeecCCCCCCcCHhHHHHHHHHHhCc
Q 012083 407 IGLWLEPDDNGIIGRHEIKRKVDELLSN 434 (471)
Q Consensus 407 ~G~~~~~~~~~~~~~~~l~~~i~~ll~~ 434 (471)
-|..++ ..+++.|..+|.++|.+
T Consensus 976 tGflf~-----~~d~~aLa~AL~raL~~ 998 (1036)
T PLN02316 976 NGFSFD-----GADAAGVDYALNRAISA 998 (1036)
T ss_pred ceEEeC-----CCCHHHHHHHHHHHHhh
Confidence 677774 35788999999999975
|
|
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.011 Score=60.06 Aligned_cols=93 Identities=15% Similarity=0.145 Sum_probs=62.7
Q ss_pred CCCcEEEeccchhhhhccCcceeeeec----cCcchhhHhhhcCCceeecccccchhhhHHHHHhh----hc-ceeeecC
Q 012083 343 ADFGKMVKWAPQEKVLAHPSVACYLTH----CGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDD----WK-IGLWLEP 413 (471)
Q Consensus 343 ~~nv~~~~~vpq~~lL~~~~~~~~ItH----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~----~G-~G~~~~~ 413 (471)
.+||.+.+...-..+++..++ +|.. |--+++.||+++|+|+|+.. .......+.+. +| .|..+++
T Consensus 353 ~~~V~f~G~~~v~~~l~~aDv--~vlpS~~Eg~p~~vlEAma~G~PVVatd----~g~~~elv~~~~~~~~g~~G~lv~~ 426 (475)
T cd03813 353 EDNVKFTGFQNVKEYLPKLDV--LVLTSISEGQPLVILEAMAAGIPVVATD----VGSCRELIEGADDEALGPAGEVVPP 426 (475)
T ss_pred CCeEEEcCCccHHHHHHhCCE--EEeCchhhcCChHHHHHHHcCCCEEECC----CCChHHHhcCCcccccCCceEEECC
Confidence 478888885445578866666 5543 34568999999999999853 33333333331 12 6777743
Q ss_pred CCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHH
Q 012083 414 DDNGIIGRHEIKRKVDELLSNDVVRKNALKLKE 446 (471)
Q Consensus 414 ~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~ 446 (471)
-+.+++.++|.++++|++.++++.+-+.
T Consensus 427 -----~d~~~la~ai~~ll~~~~~~~~~~~~a~ 454 (475)
T cd03813 427 -----ADPEALARAILRLLKDPELRRAMGEAGR 454 (475)
T ss_pred -----CCHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 4789999999999999876555444333
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PRK10017 colanic acid biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.056 Score=53.67 Aligned_cols=177 Identities=11% Similarity=0.141 Sum_probs=101.5
Q ss_pred ccccCCCCCcEEEEecCccccC------CHH----HHHHHHHHHHhCCCCEEEEEcCC-CCC-CCCC-CCCchhHHhhC-
Q 012083 278 SWLDKQPPGSVIYAAFGSISKL------SQQ----QFNELALGLELAGQPFLCGVRPG-FIN-GSST-NNPDGLVAKVA- 343 (471)
Q Consensus 278 ~~l~~~~~~~vv~vs~GS~~~~------~~~----~~~~~~~al~~~~~~~i~~~~~~-~~~-~~~~-~lp~~~~~~~~- 343 (471)
.|+...+++++|-|+....... ..+ .+..+++.+.+.++++++...-. ... ...+ .....+.+.++
T Consensus 226 ~~~~~~~~~~~Vgisvr~~~~~~~~~~~~~~~Y~~~la~~i~~Li~~g~~Vv~lp~~~~~~~~~~dD~~~~~~l~~~~~~ 305 (426)
T PRK10017 226 HWLDVAAQQKTVAITLRELAPFDKRLGTTQQAYEKAFAGVVNRIIDEGYQVIALSTCTGIDSYNKDDRMVALNLRQHVSD 305 (426)
T ss_pred hhhcccccCCEEEEEecccccccccccccHHHHHHHHHHHHHHHHHCCCeEEEEecccCccCCCCchHHHHHHHHHhccc
Confidence 4554434456888886543211 222 24445555555688876554211 000 0000 01122333332
Q ss_pred -CCcEEE--eccchh--hhhccCcceeeeeccCcchhhHhhhcCCceeecccccchhhhHHHHHhhhcceee-ecCCCCC
Q 012083 344 -DFGKMV--KWAPQE--KVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLW-LEPDDNG 417 (471)
Q Consensus 344 -~nv~~~--~~vpq~--~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~-~~~~~~~ 417 (471)
.++.++ ++-|.+ .+++++++ +|..= +=++.-|+..|||.+.+++ |.- ....+.+ +|.... .+. .
T Consensus 306 ~~~~~vi~~~~~~~e~~~iIs~~dl--~ig~R-lHa~I~a~~~gvP~i~i~Y--~~K-~~~~~~~-lg~~~~~~~~---~ 375 (426)
T PRK10017 306 PARYHVVMDELNDLEMGKILGACEL--TVGTR-LHSAIISMNFGTPAIAINY--EHK-SAGIMQQ-LGLPEMAIDI---R 375 (426)
T ss_pred ccceeEecCCCChHHHHHHHhhCCE--EEEec-chHHHHHHHcCCCEEEeee--hHH-HHHHHHH-cCCccEEech---h
Confidence 334443 333443 67755554 77532 3356678899999999987 433 3444467 788866 554 7
Q ss_pred CcCHhHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHh
Q 012083 418 IIGRHEIKRKVDELLSND-VVRKNALKLKELAQKSVTKEGSSSKNLEYFIKQIT 470 (471)
Q Consensus 418 ~~~~~~l~~~i~~ll~~~-~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~ 470 (471)
.++.++|.+.+.++++|. +++++.++..+++++ .......++++.+-
T Consensus 376 ~l~~~~Li~~v~~~~~~r~~~~~~l~~~v~~~r~------~~~~~~~~~~~~~~ 423 (426)
T PRK10017 376 HLLDGSLQAMVADTLGQLPALNARLAEAVSRERQ------TGMQMVQSVLERIG 423 (426)
T ss_pred hCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHhc
Confidence 788899999999999985 677777666666665 34456667776654
|
|
| >PRK14098 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.034 Score=56.65 Aligned_cols=82 Identities=13% Similarity=0.071 Sum_probs=53.8
Q ss_pred hhCCCcEEEeccchh---hhhccCcceeeeecc---Cc-chhhHhhhcCCceeeccccc--chhhhHHHHHhhhcceeee
Q 012083 341 KVADFGKMVKWAPQE---KVLAHPSVACYLTHC---GW-NSTMEGISMGVPFLCWPWGH--DHLYIKSCICDDWKIGLWL 411 (471)
Q Consensus 341 ~~~~nv~~~~~vpq~---~lL~~~~~~~~ItHg---G~-~s~~eal~~GvP~l~~P~~~--DQ~~na~~v~~~~G~G~~~ 411 (471)
+.++++.+..+++.. .+++.+++ |+... |. .+.+||+++|+|.|+....+ |...+ ...+. +-|..+
T Consensus 359 ~~~~~V~~~g~~~~~~~~~~~a~aDi--~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~--~~~~~-~~G~l~ 433 (489)
T PRK14098 359 EHPEQVSVQTEFTDAFFHLAIAGLDM--LLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEE--VSEDK-GSGFIF 433 (489)
T ss_pred HCCCCEEEEEecCHHHHHHHHHhCCE--EEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeec--CCCCC-CceeEe
Confidence 346788888888864 57866666 76543 22 37789999999888775432 22111 11122 677777
Q ss_pred cCCCCCCcCHhHHHHHHHHHh
Q 012083 412 EPDDNGIIGRHEIKRKVDELL 432 (471)
Q Consensus 412 ~~~~~~~~~~~~l~~~i~~ll 432 (471)
+. -+.+++.++|.+++
T Consensus 434 ~~-----~d~~~la~ai~~~l 449 (489)
T PRK14098 434 HD-----YTPEALVAKLGEAL 449 (489)
T ss_pred CC-----CCHHHHHHHHHHHH
Confidence 43 47899999999866
|
|
| >COG5017 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.00032 Score=55.59 Aligned_cols=109 Identities=13% Similarity=0.166 Sum_probs=69.7
Q ss_pred EEEecCccccCCHHHHHH--HHHHHHhCCCCEEEEEcCCCCCCCCCCCCchhHHhhCCCcEEE--eccch-hhhhccCcc
Q 012083 289 IYAAFGSISKLSQQQFNE--LALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMV--KWAPQ-EKVLAHPSV 363 (471)
Q Consensus 289 v~vs~GS~~~~~~~~~~~--~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~--~~vpq-~~lL~~~~~ 363 (471)
|||+.||....=...+.. +..-.+....++|+..+.. +..|- .+ .++. ++-+- ..+...++
T Consensus 2 ifVTvGstf~~f~rlv~k~e~~el~~~i~e~lIvQyGn~------d~kpv------ag-l~v~~F~~~~kiQsli~dar- 67 (161)
T COG5017 2 IFVTVGSTFYPFNRLVLKIEVLELTELIQEELIVQYGNG------DIKPV------AG-LRVYGFDKEEKIQSLIHDAR- 67 (161)
T ss_pred eEEEecCccchHHHHHhhHHHHHHHHHhhhheeeeecCC------Ccccc------cc-cEEEeechHHHHHHHhhcce-
Confidence 789999962211222222 2222333455889888764 22221 11 2344 44453 34554444
Q ss_pred eeeeeccCcchhhHhhhcCCceeeccccc--------chhhhHHHHHhhhcceeeecC
Q 012083 364 ACYLTHCGWNSTMEGISMGVPFLCWPWGH--------DHLYIKSCICDDWKIGLWLEP 413 (471)
Q Consensus 364 ~~~ItHgG~~s~~eal~~GvP~l~~P~~~--------DQ~~na~~v~~~~G~G~~~~~ 413 (471)
.+|+|+|.||++.++..++|.+++|-.. .|-.-|..+++ .+.=....+
T Consensus 68 -IVISHaG~GSIL~~~rl~kplIv~pr~s~y~elvDdHQvela~klae-~~~vv~~sp 123 (161)
T COG5017 68 -IVISHAGEGSILLLLRLDKPLIVVPRSSQYQELVDDHQVELALKLAE-INYVVACSP 123 (161)
T ss_pred -EEEeccCcchHHHHhhcCCcEEEEECchhHHHhhhhHHHHHHHHHHh-cCceEEEcC
Confidence 5999999999999999999999999643 57788888888 687777753
|
|
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.01 Score=58.13 Aligned_cols=89 Identities=16% Similarity=0.148 Sum_probs=62.2
Q ss_pred CCCcEEEeccchh-hhhccCcceeeeec--cCcchhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeecCCCCCCc
Q 012083 343 ADFGKMVKWAPQE-KVLAHPSVACYLTH--CGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGII 419 (471)
Q Consensus 343 ~~nv~~~~~vpq~-~lL~~~~~~~~ItH--gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~ 419 (471)
++++.+.++.++. .+++.+++-++.++ |...++.||+++|+|+|+..... .....+.. -..|..++. -
T Consensus 260 ~~~v~~~g~~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~---g~~~~v~~-~~~G~lv~~-----~ 330 (372)
T cd04949 260 EDYVFLKGYTRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNY---GPSEIIED-GENGYLVPK-----G 330 (372)
T ss_pred cceEEEcCCCCCHHHHHhhhhEEEecccccccChHHHHHHhCCCCEEEecCCC---CcHHHccc-CCCceEeCC-----C
Confidence 5677777877664 68877777445554 34568999999999999864321 13344455 367777743 4
Q ss_pred CHhHHHHHHHHHhCcHHHHHH
Q 012083 420 GRHEIKRKVDELLSNDVVRKN 440 (471)
Q Consensus 420 ~~~~l~~~i~~ll~~~~~~~~ 440 (471)
+.+++.++|..+++|++..++
T Consensus 331 d~~~la~~i~~ll~~~~~~~~ 351 (372)
T cd04949 331 DIEALAEAIIELLNDPKLLQK 351 (372)
T ss_pred cHHHHHHHHHHHHcCHHHHHH
Confidence 789999999999999744333
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra |
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.0012 Score=65.77 Aligned_cols=90 Identities=14% Similarity=0.105 Sum_probs=63.8
Q ss_pred CCCcEEEeccchh---hhhccCcceeeeeccC----cchhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeecCCC
Q 012083 343 ADFGKMVKWAPQE---KVLAHPSVACYLTHCG----WNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDD 415 (471)
Q Consensus 343 ~~nv~~~~~vpq~---~lL~~~~~~~~ItHgG----~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~ 415 (471)
.+++.+.+|+++. .+++..++++||...- -++++||+++|+|+|+.. -......+.+ -+.|..+.
T Consensus 288 ~~~V~f~G~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~----vgg~~e~i~~-~~~G~l~~--- 359 (407)
T cd04946 288 NISVNFTGELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATN----VGGTPEIVDN-GGNGLLLS--- 359 (407)
T ss_pred CceEEEecCCChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCC----CCCcHHHhcC-CCcEEEeC---
Confidence 3568888999976 4555445555775543 568999999999999864 3335556666 24888775
Q ss_pred CCCcCHhHHHHHHHHHhCcHHHHHHH
Q 012083 416 NGIIGRHEIKRKVDELLSNDVVRKNA 441 (471)
Q Consensus 416 ~~~~~~~~l~~~i~~ll~~~~~~~~a 441 (471)
..-+.+++.++|.++++|++.+++.
T Consensus 360 -~~~~~~~la~~I~~ll~~~~~~~~m 384 (407)
T cd04946 360 -KDPTPNELVSSLSKFIDNEEEYQTM 384 (407)
T ss_pred -CCCCHHHHHHHHHHHHhCHHHHHHH
Confidence 3347899999999999988654443
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. |
| >PRK14099 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.043 Score=55.79 Aligned_cols=40 Identities=20% Similarity=0.201 Sum_probs=32.9
Q ss_pred CCcEEEEEcCC------CcccHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012083 16 TNVHVLLVSFP------AQGHVASLMKLAHRLADCRIKVTFVTTEF 55 (471)
Q Consensus 16 ~~~~Il~~~~~------~~GH~~p~~~La~~L~~rGh~Vt~~~~~~ 55 (471)
++|||+|++.- +.|=-..+-+|.++|+++||+|.++.+..
T Consensus 2 ~~~~il~v~~E~~p~~k~ggl~dv~~~lp~~l~~~g~~v~v~~P~y 47 (485)
T PRK14099 2 TPLRVLSVASEIFPLIKTGGLADVAGALPAALKAHGVEVRTLVPGY 47 (485)
T ss_pred CCcEEEEEEeccccccCCCcHHHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 67899999843 45666678899999999999999998854
|
|
| >PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.001 Score=57.28 Aligned_cols=91 Identities=16% Similarity=0.234 Sum_probs=67.8
Q ss_pred CCCcEEEeccch---hhhhccCcceeeeec----cCcchhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeecCCC
Q 012083 343 ADFGKMVKWAPQ---EKVLAHPSVACYLTH----CGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDD 415 (471)
Q Consensus 343 ~~nv~~~~~vpq---~~lL~~~~~~~~ItH----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~ 415 (471)
.+++.+.+++++ ..++..+++ +|+. |..+++.||+++|+|+|+. |...+...+.. .+.|..++.
T Consensus 72 ~~~i~~~~~~~~~~l~~~~~~~di--~v~~s~~e~~~~~~~Ea~~~g~pvI~~----~~~~~~e~~~~-~~~g~~~~~-- 142 (172)
T PF00534_consen 72 KENIIFLGYVPDDELDELYKSSDI--FVSPSRNEGFGLSLLEAMACGCPVIAS----DIGGNNEIIND-GVNGFLFDP-- 142 (172)
T ss_dssp GTTEEEEESHSHHHHHHHHHHTSE--EEE-BSSBSS-HHHHHHHHTT-EEEEE----SSTHHHHHSGT-TTSEEEEST--
T ss_pred ccccccccccccccccccccccee--ccccccccccccccccccccccceeec----cccCCceeecc-ccceEEeCC--
Confidence 578889999983 368877776 7766 6677999999999999975 45666666677 467899863
Q ss_pred CCCcCHhHHHHHHHHHhCcHHHHHHHHHHH
Q 012083 416 NGIIGRHEIKRKVDELLSNDVVRKNALKLK 445 (471)
Q Consensus 416 ~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~ 445 (471)
.+.+++.++|.+++.|++.++++.+-+
T Consensus 143 ---~~~~~l~~~i~~~l~~~~~~~~l~~~~ 169 (172)
T PF00534_consen 143 ---NDIEELADAIEKLLNDPELRQKLGKNA 169 (172)
T ss_dssp ---TSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---CCHHHHHHHHHHHHCCHHHHHHHHHHh
Confidence 388999999999999986555555443
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B .... |
| >PRK10125 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.032 Score=55.35 Aligned_cols=100 Identities=12% Similarity=-0.015 Sum_probs=58.6
Q ss_pred HHHHHHHHHHhCCCCE-EEEEcCCCCCCCCCCCCchhHHhhCCCcEEEeccch----hhhhccCcceeeeec----cCcc
Q 012083 303 QFNELALGLELAGQPF-LCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQ----EKVLAHPSVACYLTH----CGWN 373 (471)
Q Consensus 303 ~~~~~~~al~~~~~~~-i~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq----~~lL~~~~~~~~ItH----gG~~ 373 (471)
.+..+++|+...+..+ ++.++.. . . . ...++...++... ..+++.+++ ||.- |--+
T Consensus 257 g~~~li~A~~~l~~~~~L~ivG~g----~-~---~-----~~~~v~~~g~~~~~~~l~~~y~~aDv--fV~pS~~Egfp~ 321 (405)
T PRK10125 257 TDQQLVREMMALGDKIELHTFGKF----S-P---F-----TAGNVVNHGFETDKRKLMSALNQMDA--LVFSSRVDNYPL 321 (405)
T ss_pred cHHHHHHHHHhCCCCeEEEEEcCC----C-c---c-----cccceEEecCcCCHHHHHHHHHhCCE--EEECCccccCcC
Confidence 3566888887765443 3444432 0 0 0 1244555566532 245544555 6653 3356
Q ss_pred hhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHH
Q 012083 374 STMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKV 428 (471)
Q Consensus 374 s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i 428 (471)
+++||+++|+|+|+....+ ....+.. +-|..+++ -+.++|++.+
T Consensus 322 vilEAmA~G~PVVat~~gG----~~Eiv~~--~~G~lv~~-----~d~~~La~~~ 365 (405)
T PRK10125 322 ILCEALSIGVPVIATHSDA----AREVLQK--SGGKTVSE-----EEVLQLAQLS 365 (405)
T ss_pred HHHHHHHcCCCEEEeCCCC----hHHhEeC--CcEEEECC-----CCHHHHHhcc
Confidence 8999999999999997654 2222222 56888864 3567777643
|
|
| >PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.0045 Score=60.96 Aligned_cols=86 Identities=16% Similarity=0.217 Sum_probs=61.4
Q ss_pred hCCCcEEEeccchh---hhhccCcceeeeec----cCc-chhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeecC
Q 012083 342 VADFGKMVKWAPQE---KVLAHPSVACYLTH----CGW-NSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEP 413 (471)
Q Consensus 342 ~~~nv~~~~~vpq~---~lL~~~~~~~~ItH----gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~ 413 (471)
...++.+.+++|+. .+++.+++ +|.. .|. .++.||+++|+|+|+.... .+...+.+ -..|..+.
T Consensus 255 l~~~v~~~G~~~~~~l~~~~~~aDv--~v~pS~~~E~f~~~~lEAma~G~PVI~s~~g----g~~Eiv~~-~~~G~~l~- 326 (380)
T PRK15484 255 IGDRCIMLGGQPPEKMHNYYPLADL--VVVPSQVEEAFCMVAVEAMAAGKPVLASTKG----GITEFVLE-GITGYHLA- 326 (380)
T ss_pred cCCcEEEeCCCCHHHHHHHHHhCCE--EEeCCCCccccccHHHHHHHcCCCEEEeCCC----CcHhhccc-CCceEEEe-
Confidence 45778888999865 56877777 6643 332 5788999999999997543 34445555 25676553
Q ss_pred CCCCCcCHhHHHHHHHHHhCcHHHH
Q 012083 414 DDNGIIGRHEIKRKVDELLSNDVVR 438 (471)
Q Consensus 414 ~~~~~~~~~~l~~~i~~ll~~~~~~ 438 (471)
...+.+++.++|.++++|++.+
T Consensus 327 ---~~~d~~~la~~I~~ll~d~~~~ 348 (380)
T PRK15484 327 ---EPMTSDSIISDINRTLADPELT 348 (380)
T ss_pred ---CCCCHHHHHHHHHHHHcCHHHH
Confidence 2347899999999999998653
|
|
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.014 Score=52.29 Aligned_cols=48 Identities=19% Similarity=0.167 Sum_probs=35.6
Q ss_pred CCCcEEEeccch-h---hhhccCcceeeeeccC----cchhhHhhhcCCceeeccccc
Q 012083 343 ADFGKMVKWAPQ-E---KVLAHPSVACYLTHCG----WNSTMEGISMGVPFLCWPWGH 392 (471)
Q Consensus 343 ~~nv~~~~~vpq-~---~lL~~~~~~~~ItHgG----~~s~~eal~~GvP~l~~P~~~ 392 (471)
.+|+.+.+++++ . .+++.+++ +|+... .+++.||+++|+|+|+.+...
T Consensus 160 ~~~v~~~~~~~~~~~~~~~~~~~di--~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~ 215 (229)
T cd01635 160 LDRVIFLGGLDPEELLALLLAAADV--FVLPSLREGFGLVVLEAMACGLPVIATDVGG 215 (229)
T ss_pred cccEEEeCCCCcHHHHHHHhhcCCE--EEecccccCcChHHHHHHhCCCCEEEcCCCC
Confidence 578888888732 2 34433555 887776 789999999999999987654
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.047 Score=52.34 Aligned_cols=134 Identities=10% Similarity=0.031 Sum_probs=75.9
Q ss_pred CcEEEEecCcc---ccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCCchhHHhhCCCcEEEe--ccchh-hhhc
Q 012083 286 GSVIYAAFGSI---SKLSQQQFNELALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVK--WAPQE-KVLA 359 (471)
Q Consensus 286 ~~vv~vs~GS~---~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~~--~vpq~-~lL~ 359 (471)
++.|.+..|+. ..++.+.+.++++.+.+.++++++..++. .+........+..+. ..+.+ -+++. .+++
T Consensus 179 ~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~~~~~vl~~g~~----~e~~~~~~i~~~~~~-~~l~g~~sL~el~ali~ 253 (319)
T TIGR02193 179 APYAVLLHATSRDDKTWPEERWRELARLLLARGLQIVLPWGND----AEKQRAERIAEALPG-AVVLPKMSLAEVAALLA 253 (319)
T ss_pred CCEEEEEeCCCcccCCCCHHHHHHHHHHHHHCCCeEEEeCCCH----HHHHHHHHHHhhCCC-CeecCCCCHHHHHHHHH
Confidence 45666666643 45678889999998876677776654432 111111122222222 22333 24443 7886
Q ss_pred cCcceeeeeccCcchhhHhhhcCCceeecccccchhhhHHHHHhhhccee-eecCCCCCCcCHhHHHHHHHHHh
Q 012083 360 HPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGL-WLEPDDNGIIGRHEIKRKVDELL 432 (471)
Q Consensus 360 ~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~-~~~~~~~~~~~~~~l~~~i~~ll 432 (471)
++++ +|+. -.|.++=|...|+|++++ ++ +.+..+-.= +|-.. .+..+....++++++.++++++|
T Consensus 254 ~a~l--~I~~-DSgp~HlAaa~g~P~i~l--fg--~t~p~~~~P-~~~~~~~~~~~~~~~I~~~~V~~ai~~~~ 319 (319)
T TIGR02193 254 GADA--VVGV-DTGLTHLAAALDKPTVTL--YG--ATDPGRTGG-YGKPNVALLGESGANPTPDEVLAALEELL 319 (319)
T ss_pred cCCE--EEeC-CChHHHHHHHcCCCEEEE--EC--CCCHhhccc-CCCCceEEccCccCCCCHHHHHHHHHhhC
Confidence 6666 9987 467788888999999986 22 111222111 12211 11111147899999999998875
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0056 Score=60.98 Aligned_cols=139 Identities=18% Similarity=0.190 Sum_probs=92.3
Q ss_pred CCCcEEEEecCccccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCCchhHHhh------CCCcEEEeccchh--
Q 012083 284 PPGSVIYAAFGSISKLSQQQFNELALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAKV------ADFGKMVKWAPQE-- 355 (471)
Q Consensus 284 ~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~------~~nv~~~~~vpq~-- 355 (471)
++..+||.+|--....++..++.-++.|...+..++|.+..+..- ...|.... |+++.+.+-++-.
T Consensus 756 p~d~vvf~~FNqLyKidP~~l~~W~~ILk~VPnS~LwllrfPa~g------e~rf~ty~~~~Gl~p~riifs~va~k~eH 829 (966)
T KOG4626|consen 756 PEDAVVFCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVG------EQRFRTYAEQLGLEPDRIIFSPVAAKEEH 829 (966)
T ss_pred CCCeEEEeechhhhcCCHHHHHHHHHHHHhCCcceeEEEeccccc------hHHHHHHHHHhCCCccceeeccccchHHH
Confidence 345699999999999999999999999999999999999754100 02222221 5666666555532
Q ss_pred ---hhhccCcceeeeeccCcchhhHhhhcCCceeecccccc-hhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHH
Q 012083 356 ---KVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHD-HLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDEL 431 (471)
Q Consensus 356 ---~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~D-Q~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~l 431 (471)
-.|+.-.++-+.+. |..|.++.|++|||||.+|...- ...-+..+.. +|+|-.+.+ +.++-.+.--++
T Consensus 830 vrr~~LaDv~LDTplcn-GhTTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~-~Gl~hliak------~~eEY~~iaV~L 901 (966)
T KOG4626|consen 830 VRRGQLADVCLDTPLCN-GHTTGMDVLWAGVPMVTMPGETLASRVAASLLTA-LGLGHLIAK------NREEYVQIAVRL 901 (966)
T ss_pred HHhhhhhhhcccCcCcC-CcccchhhhccCCceeecccHHHHHHHHHHHHHH-cccHHHHhh------hHHHHHHHHHHh
Confidence 34444444546665 67899999999999999998543 3334445555 799987753 444444433344
Q ss_pred hCcHH
Q 012083 432 LSNDV 436 (471)
Q Consensus 432 l~~~~ 436 (471)
-.|.+
T Consensus 902 atd~~ 906 (966)
T KOG4626|consen 902 ATDKE 906 (966)
T ss_pred hcCHH
Confidence 44543
|
|
| >COG1817 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.17 Score=46.68 Aligned_cols=113 Identities=13% Similarity=-0.009 Sum_probs=74.2
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcc--hhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCCccc
Q 012083 19 HVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFI--CERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDDRKD 96 (471)
Q Consensus 19 ~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 96 (471)
||+|-- +-.-|+.-+..+-.+|.++||+|.+.+-... .+.+... |+.+..+... ....
T Consensus 2 kVwiDI-~n~~hvhfFk~lI~elekkG~ev~iT~rd~~~v~~LLd~y--------------gf~~~~Igk~-----g~~t 61 (346)
T COG1817 2 KVWIDI-GNPPHVHFFKNLIWELEKKGHEVLITCRDFGVVTELLDLY--------------GFPYKSIGKH-----GGVT 61 (346)
T ss_pred eEEEEc-CCcchhhHHHHHHHHHHhCCeEEEEEEeecCcHHHHHHHh--------------CCCeEeeccc-----CCcc
Confidence 555543 4556888999999999999999988766432 2333333 7777776421 1223
Q ss_pred HHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEEEeCchHH
Q 012083 97 EAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKASIYTSAPG 160 (471)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~ 160 (471)
+.+.+.....+ .-.+.+++.+ .+||+.+. -.+..+..+|--+|+|.|++....-.
T Consensus 62 l~~Kl~~~~eR-~~~L~ki~~~-------~kpdv~i~-~~s~~l~rvafgLg~psIi~~D~ehA 116 (346)
T COG1817 62 LKEKLLESAER-VYKLSKIIAE-------FKPDVAIG-KHSPELPRVAFGLGIPSIIFVDNEHA 116 (346)
T ss_pred HHHHHHHHHHH-HHHHHHHHhh-------cCCceEee-cCCcchhhHHhhcCCceEEecCChhH
Confidence 33222222211 1224555555 99999998 66778999999999999998765443
|
|
| >PRK09814 beta-1,6-galactofuranosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.003 Score=61.03 Aligned_cols=110 Identities=16% Similarity=0.259 Sum_probs=78.1
Q ss_pred hCCCcEEEeccchhhh---hccCcceeeeecc-------Cc------chhhHhhhcCCceeecccccchhhhHHHHHhhh
Q 012083 342 VADFGKMVKWAPQEKV---LAHPSVACYLTHC-------GW------NSTMEGISMGVPFLCWPWGHDHLYIKSCICDDW 405 (471)
Q Consensus 342 ~~~nv~~~~~vpq~~l---L~~~~~~~~ItHg-------G~------~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~ 405 (471)
..+||.+.+|+|+.++ |+. +.+++...- .+ +-+.+.|++|+|+|+. ++...+..+++ .
T Consensus 205 ~~~~V~f~G~~~~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~----~~~~~~~~V~~-~ 278 (333)
T PRK09814 205 NSANISYKGWFDPEELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVW----SKAAIADFIVE-N 278 (333)
T ss_pred cCCCeEEecCCCHHHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEEC----CCccHHHHHHh-C
Confidence 3578999999998755 443 333222211 11 1267789999999985 55678888888 5
Q ss_pred cceeeecCCCCCCcCHhHHHHHHHHHhCcH--HHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHH
Q 012083 406 KIGLWLEPDDNGIIGRHEIKRKVDELLSND--VVRKNALKLKELAQKSVTKEGSSSKNLEYFIKQ 468 (471)
Q Consensus 406 G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~--~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~ 468 (471)
++|..++ +.+++.+++..+..+. ++++|++++++++++ |---.+++++.+..
T Consensus 279 ~~G~~v~-------~~~el~~~l~~~~~~~~~~m~~n~~~~~~~~~~----g~~~~~~~~~~~~~ 332 (333)
T PRK09814 279 GLGFVVD-------SLEELPEIIDNITEEEYQEMVENVKKISKLLRN----GYFTKKALVDAIKE 332 (333)
T ss_pred CceEEeC-------CHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhc----chhHHHHHHHHHhc
Confidence 9999994 5578999998865332 688999999999986 66666666666543
|
|
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.65 Score=50.22 Aligned_cols=91 Identities=10% Similarity=0.139 Sum_probs=56.9
Q ss_pred CCCcEEEeccchh---hhhccCcceeeeecc----CcchhhHhhhcCCceeeccccc--chhhh--HHHH-Hhhhcceee
Q 012083 343 ADFGKMVKWAPQE---KVLAHPSVACYLTHC----GWNSTMEGISMGVPFLCWPWGH--DHLYI--KSCI-CDDWKIGLW 410 (471)
Q Consensus 343 ~~nv~~~~~vpq~---~lL~~~~~~~~ItHg----G~~s~~eal~~GvP~l~~P~~~--DQ~~n--a~~v-~~~~G~G~~ 410 (471)
.++|.+..+.+.. .+++.+++ ||.-. --.+.+||+++|+|.|+....+ |...+ ...+ .+ -+-|..
T Consensus 836 ~drV~FlG~~de~lah~IYAaADI--FLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~e-g~NGfL 912 (977)
T PLN02939 836 NNNIRLILKYDEALSHSIYAASDM--FIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVE-LRNGFT 912 (977)
T ss_pred CCeEEEEeccCHHHHHHHHHhCCE--EEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccC-CCceEE
Confidence 4578888887764 47866666 77542 2347899999999998876533 22211 1111 12 246777
Q ss_pred ecCCCCCCcCHhHHHHHHHHHhC----cHHHHHHH
Q 012083 411 LEPDDNGIIGRHEIKRKVDELLS----NDVVRKNA 441 (471)
Q Consensus 411 ~~~~~~~~~~~~~l~~~i~~ll~----~~~~~~~a 441 (471)
+.. .+.+++.++|.+++. |++.+++.
T Consensus 913 f~~-----~D~eaLa~AL~rAL~~~~~dpe~~~~L 942 (977)
T PLN02939 913 FLT-----PDEQGLNSALERAFNYYKRKPEVWKQL 942 (977)
T ss_pred ecC-----CCHHHHHHHHHHHHHHhccCHHHHHHH
Confidence 743 477889988888774 55544443
|
|
| >PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.011 Score=48.86 Aligned_cols=103 Identities=19% Similarity=0.240 Sum_probs=66.2
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCCcccHH
Q 012083 19 HVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDDRKDEA 98 (471)
Q Consensus 19 ~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 98 (471)
||++++.....| ...+++.|.++||+|++++.....+.... ..++.+..++.. .....
T Consensus 1 KIl~i~~~~~~~---~~~~~~~L~~~g~~V~ii~~~~~~~~~~~-------------~~~i~~~~~~~~------~k~~~ 58 (139)
T PF13477_consen 1 KILLIGNTPSTF---IYNLAKELKKRGYDVHIITPRNDYEKYEI-------------IEGIKVIRLPSP------RKSPL 58 (139)
T ss_pred CEEEEecCcHHH---HHHHHHHHHHCCCEEEEEEcCCCchhhhH-------------hCCeEEEEecCC------CCccH
Confidence 577887666555 56889999999999999999655433322 238888887432 11122
Q ss_pred HHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcc---hHHHHHHHcC-CceEEEeC
Q 012083 99 KMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFG---WALQVAAKLE-LKKASIYT 156 (471)
Q Consensus 99 ~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~---~~~~~A~~lg-iP~v~~~~ 156 (471)
.++. .. .+..++.+ .+||+|.+-.... .+..++...+ +|++....
T Consensus 59 ~~~~-----~~-~l~k~ik~-------~~~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~~h 107 (139)
T PF13477_consen 59 NYIK-----YF-RLRKIIKK-------EKPDVIHCHTPSPYGLFAMLAKKLLKNKKVIYTVH 107 (139)
T ss_pred HHHH-----HH-HHHHHhcc-------CCCCEEEEecCChHHHHHHHHHHHcCCCCEEEEec
Confidence 2221 11 34555555 8999998776543 3445667888 89887543
|
|
| >PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0027 Score=52.22 Aligned_cols=80 Identities=15% Similarity=0.200 Sum_probs=49.5
Q ss_pred CCCcEEEeccchh-hhhccCcceeeeec---cCcchhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeecCCCCCC
Q 012083 343 ADFGKMVKWAPQE-KVLAHPSVACYLTH---CGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGI 418 (471)
Q Consensus 343 ~~nv~~~~~vpq~-~lL~~~~~~~~ItH---gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~ 418 (471)
.+|+.+.+|++.. .+++.+++.+..+. |-.+++.|++++|+|+|+.+.. ....++. .+.|..+.
T Consensus 52 ~~~v~~~g~~~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~~-----~~~~~~~-~~~~~~~~------ 119 (135)
T PF13692_consen 52 RPNVRFHGFVEELPEILAAADVGLIPSRFNEGFPNKLLEAMAAGKPVIASDNG-----AEGIVEE-DGCGVLVA------ 119 (135)
T ss_dssp HCTEEEE-S-HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHHH-----CHCHS----SEEEE-T------
T ss_pred CCCEEEcCCHHHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhCCCEEECCcc-----hhhheee-cCCeEEEC------
Confidence 5699999999743 67888887555442 2348999999999999998762 1222333 37777773
Q ss_pred cCHhHHHHHHHHHhCc
Q 012083 419 IGRHEIKRKVDELLSN 434 (471)
Q Consensus 419 ~~~~~l~~~i~~ll~~ 434 (471)
-+.+++.++|+++++|
T Consensus 120 ~~~~~l~~~i~~l~~d 135 (135)
T PF13692_consen 120 NDPEELAEAIERLLND 135 (135)
T ss_dssp T-HHHHHHHHHHHHH-
T ss_pred CCHHHHHHHHHHHhcC
Confidence 2889999999999875
|
|
| >PRK10422 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.12 Score=50.25 Aligned_cols=110 Identities=9% Similarity=0.118 Sum_probs=73.3
Q ss_pred cCCCCcEEEEEcCCCcccHHHHHHHHHHHHhC--CCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeE-EEeCCCCCC
Q 012083 13 LNKTNVHVLLVSFPAQGHVASLMKLAHRLADC--RIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVR-IVPLPDGLE 89 (471)
Q Consensus 13 m~~~~~~Il~~~~~~~GH~~p~~~La~~L~~r--Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~ 89 (471)
|+...+|||++-....|++.-..++.++|+++ +.+|++++.+.+.+.++.. +.+. ++.++..
T Consensus 1 ~~~~~~~ILii~~~~iGD~vl~~P~l~~Lk~~~P~a~I~~l~~~~~~~l~~~~-------------P~id~vi~~~~~-- 65 (352)
T PRK10422 1 MDKPFRRILIIKMRFHGDMLLTTPVISSLKKNYPDAKIDVLLYQDTIPILSEN-------------PEINALYGIKNK-- 65 (352)
T ss_pred CCCCCceEEEEEecccCceeeHHHHHHHHHHHCCCCeEEEEeccChHHHhccC-------------CCceEEEEeccc--
Confidence 34445899999999999999999999999997 8999999999988877644 2332 2222211
Q ss_pred CCCCcccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEE
Q 012083 90 PEDDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKAS 153 (471)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~ 153 (471)
.......+. ....++.+++. .++|++|.-........++...|.|..+
T Consensus 66 ----~~~~~~~~~--------~~~~l~~~lr~----~~yD~vidl~~~~~s~ll~~l~~a~~ri 113 (352)
T PRK10422 66 ----KAGASEKIK--------NFFSLIKVLRA----NKYDLIVNLTDQWMVALLVRLLNARVKI 113 (352)
T ss_pred ----cccHHHHHH--------HHHHHHHHHhh----CCCCEEEEcccchHHHHHHHHhCCCeEE
Confidence 001111111 12234455555 8999999654444556677777888755
|
|
| >cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS) | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.12 Score=48.54 Aligned_cols=102 Identities=12% Similarity=0.127 Sum_probs=67.0
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhC--CCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeE-EEeCCCCCCCCCCcc
Q 012083 19 HVLLVSFPAQGHVASLMKLAHRLADC--RIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVR-IVPLPDGLEPEDDRK 95 (471)
Q Consensus 19 ~Il~~~~~~~GH~~p~~~La~~L~~r--Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~ 95 (471)
|||++-....|++.-+.++.++|+++ +-+|++++.+...+.++.. +.+. +..++.. ....
T Consensus 1 kILii~~~~iGD~i~~~p~l~~Lk~~~P~~~I~~l~~~~~~~l~~~~-------------p~id~v~~~~~~----~~~~ 63 (279)
T cd03789 1 RILVIRLSWIGDVVLATPLLRALKARYPDARITVLAPPWFAPLLELM-------------PEVDRVIVLPKK----HGKL 63 (279)
T ss_pred CEEEEecccHHHHHHHHHHHHHHHHHCCCCEEEEEEChhhHHHHhcC-------------CccCEEEEcCCc----cccc
Confidence 68999999999999999999999997 4899999999888877754 1332 2222211 0000
Q ss_pred cHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEE
Q 012083 96 DEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKAS 153 (471)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~ 153 (471)
.. ....+++..++. .++|+++.-........++...+++...
T Consensus 64 ~~------------~~~~~~~~~l~~----~~~D~vi~~~~~~~~~~~~~~~~~~~~~ 105 (279)
T cd03789 64 GL------------GARRRLARALRR----RRYDLAIDLQGSLRSALLPFLAGAPRRI 105 (279)
T ss_pred ch------------HHHHHHHHHHhh----cCCCEEEECCCccHHHHHHHHhCCCeEE
Confidence 11 112344555555 7999999766555444556666666544
|
Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.7 Score=46.42 Aligned_cols=104 Identities=18% Similarity=0.251 Sum_probs=73.1
Q ss_pred CCCcEEEEecCccccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCCchhHH---hh---CCCcEEEeccchh--
Q 012083 284 PPGSVIYAAFGSISKLSQQQFNELALGLELAGQPFLCGVRPGFINGSSTNNPDGLVA---KV---ADFGKMVKWAPQE-- 355 (471)
Q Consensus 284 ~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~---~~---~~nv~~~~~vpq~-- 355 (471)
++.-+||+||+......++.+..=++.+...+..++|..+++ ..+...+.+.+ +. .++.++.+-.|..
T Consensus 427 p~~avVf~c~~n~~K~~pev~~~wmqIL~~vP~Svl~L~~~~----~~~~~~~~l~~la~~~Gv~~eRL~f~p~~~~~~h 502 (620)
T COG3914 427 PEDAVVFCCFNNYFKITPEVFALWMQILSAVPNSVLLLKAGG----DDAEINARLRDLAEREGVDSERLRFLPPAPNEDH 502 (620)
T ss_pred CCCeEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEecCC----CcHHHHHHHHHHHHHcCCChhheeecCCCCCHHH
Confidence 345699999999999999999998899998999999999874 11111111111 11 3555665655543
Q ss_pred -hhhccCcceeee---eccCcchhhHhhhcCCceeecccccchh
Q 012083 356 -KVLAHPSVACYL---THCGWNSTMEGISMGVPFLCWPWGHDHL 395 (471)
Q Consensus 356 -~lL~~~~~~~~I---tHgG~~s~~eal~~GvP~l~~P~~~DQ~ 395 (471)
+=+.-+++ |+ --||..|+.|+|++|||||..+ ++|+
T Consensus 503 ~a~~~iADl--vLDTyPY~g~TTa~daLwm~vPVlT~~--G~~F 542 (620)
T COG3914 503 RARYGIADL--VLDTYPYGGHTTASDALWMGVPVLTRV--GEQF 542 (620)
T ss_pred HHhhchhhe--eeecccCCCccchHHHHHhcCceeeec--cHHH
Confidence 33333443 55 4699999999999999999985 6775
|
|
| >PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.25 Score=48.01 Aligned_cols=103 Identities=9% Similarity=0.026 Sum_probs=71.0
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhC--CCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEe-CCCCCCCCCCc
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADC--RIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVP-LPDGLEPEDDR 94 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~r--Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~ 94 (471)
||||++-..+.|++.-..++.++|+++ +.+|++++.+.+.+.++.. +.++-+. ++. ..
T Consensus 1 mrILii~~~~iGD~il~tP~l~~Lk~~~P~a~I~~l~~~~~~~l~~~~-------------P~vd~vi~~~~----~~-- 61 (348)
T PRK10916 1 MKILVIGPSWVGDMMMSQSLYRTLKARYPQAIIDVMAPAWCRPLLSRM-------------PEVNEAIPMPL----GH-- 61 (348)
T ss_pred CcEEEEccCcccHHHhHHHHHHHHHHHCCCCeEEEEechhhHHHHhcC-------------CccCEEEeccc----cc--
Confidence 589999999999999999999999995 8999999998888877754 2333221 211 00
Q ss_pred ccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEE
Q 012083 95 KDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKAS 153 (471)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~ 153 (471)
.... + ....+++..++. .++|++|.-....-...++...|+|.-.
T Consensus 62 -~~~~-~--------~~~~~l~~~lr~----~~yD~vidl~~~~~s~~l~~~~~~~~ri 106 (348)
T PRK10916 62 -GALE-I--------GERRRLGHSLRE----KRYDRAYVLPNSFKSALVPFFAGIPHRT 106 (348)
T ss_pred -chhh-h--------HHHHHHHHHHHh----cCCCEEEECCCcHHHHHHHHHcCCCeEe
Confidence 0000 0 112344455555 8999999665555566777888888655
|
|
| >PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.061 Score=51.01 Aligned_cols=168 Identities=12% Similarity=0.036 Sum_probs=86.3
Q ss_pred cCcEEEEcchhhhchhhhhhCCCc-ceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecC-cc--ccCCHHHHH
Q 012083 230 ASDRILCTWFHELAPSANKILPSI-IPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFG-SI--SKLSQQQFN 305 (471)
Q Consensus 230 ~~~~~l~~s~~~l~~~~~~~~~~~-~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~G-S~--~~~~~~~~~ 305 (471)
..|++++..+..+. ..+|+ ...|+++.-.+. ........+..-+...+ ++.+-|-.| .. ...+.+...
T Consensus 97 ~FDlvi~p~HD~~~-----~~~Nvl~t~ga~~~i~~~--~l~~a~~~~~~~~~~l~-~p~~avLIGG~s~~~~~~~~~~~ 168 (311)
T PF06258_consen 97 PFDLVIVPEHDRLP-----RGPNVLPTLGAPNRITPE--RLAEAAAAWAPRLAALP-RPRVAVLIGGDSKHYRWDEEDAE 168 (311)
T ss_pred ccCEEEECcccCcC-----CCCceEecccCCCcCCHH--HHHHHHHhhhhhhccCC-CCeEEEEECcCCCCcccCHHHHH
Confidence 45677777665441 12344 556666654431 00001111111122222 344544444 32 445666333
Q ss_pred H----HHHHHHhCCCCEEEEEcCCCCCCCCCCCCchhHHhhC--CCcEEE---eccchhhhhccCcceeeeeccCcchhh
Q 012083 306 E----LALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVA--DFGKMV---KWAPQEKVLAHPSVACYLTHCGWNSTM 376 (471)
Q Consensus 306 ~----~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~--~nv~~~---~~vpq~~lL~~~~~~~~ItHgG~~s~~ 376 (471)
. +...++..+.++++++.... ....-..+.+... ..+.+. +.=|+...|+.++. .|||=-..+.+.
T Consensus 169 ~l~~~l~~~~~~~~~~~~vttSRRT----p~~~~~~L~~~~~~~~~~~~~~~~~~nPy~~~La~ad~-i~VT~DSvSMvs 243 (311)
T PF06258_consen 169 RLLDQLAALAAAYGGSLLVTTSRRT----PPEAEAALRELLKDNPGVYIWDGTGENPYLGFLAAADA-IVVTEDSVSMVS 243 (311)
T ss_pred HHHHHHHHHHHhCCCeEEEEcCCCC----cHHHHHHHHHhhcCCCceEEecCCCCCcHHHHHHhCCE-EEEcCccHHHHH
Confidence 3 33344555556666665541 1111122222221 223232 22367788887875 688888899999
Q ss_pred HhhhcCCceeecccccchhh----hHHHHHhhhcceeeec
Q 012083 377 EGISMGVPFLCWPWGHDHLY----IKSCICDDWKIGLWLE 412 (471)
Q Consensus 377 eal~~GvP~l~~P~~~DQ~~----na~~v~~~~G~G~~~~ 412 (471)
||+..|+|+.++|... +.. -...+.+ .|+-..+.
T Consensus 244 EA~~tG~pV~v~~l~~-~~~r~~r~~~~L~~-~g~~r~~~ 281 (311)
T PF06258_consen 244 EAAATGKPVYVLPLPG-RSGRFRRFHQSLEE-RGAVRPFT 281 (311)
T ss_pred HHHHcCCCEEEecCCC-cchHHHHHHHHHHH-CCCEEECC
Confidence 9999999999999876 322 2233445 36655554
|
The function of this family is unknown. |
| >PF06722 DUF1205: Protein of unknown function (DUF1205); InterPro: IPR010610 This entry represents a conserved region of unknown function within bacterial glycosyl transferases | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.0038 Score=47.73 Aligned_cols=55 Identities=11% Similarity=0.199 Sum_probs=44.2
Q ss_pred cCcchhcccccCCCCCcEEEEecCccccC---CH--HHHHHHHHHHHhCCCCEEEEEcCC
Q 012083 271 SEDLTCLSWLDKQPPGSVIYAAFGSISKL---SQ--QQFNELALGLELAGQPFLCGVRPG 325 (471)
Q Consensus 271 ~~~~~l~~~l~~~~~~~vv~vs~GS~~~~---~~--~~~~~~~~al~~~~~~~i~~~~~~ 325 (471)
+....+..|+...++++.|++|+||.... .. ..+..++++++.++..+|.+++..
T Consensus 25 NG~~~~P~Wl~~~~~RpRVcvT~G~~~~~~~g~~~~~~l~~ll~ala~ldvEvV~a~~~~ 84 (97)
T PF06722_consen 25 NGPAVVPDWLLEPPGRPRVCVTLGTSVRMFFGPGGVPLLRRLLEALAGLDVEVVVALPAA 84 (97)
T ss_dssp -SSEEEEGGGSSSTSSEEEEEEETHHHCHHHSCHHHCHHHHHHHHHHTSSSEEEEEETTC
T ss_pred CCCCCCCcccccCCCCCEEEEEcCCCccccccccchHHHHHHHHHHhhCCcEEEEECCHH
Confidence 34455568999999999999999997443 22 368889999999999999999865
|
Many proteins containing this domain are members of the glycosyl transferase family 28 IPR004276 from INTERPRO.; PDB: 3OTH_A 3OTG_A 3OTI_A 3D0R_A 3D0Q_B 2P6P_A 3UYK_A 3UYL_B 3TSA_B 2YJN_A. |
| >TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.2 Score=48.61 Aligned_cols=106 Identities=12% Similarity=0.102 Sum_probs=71.1
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhC--CCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeE-EEeCCCCCCCCCCcc
Q 012083 19 HVLLVSFPAQGHVASLMKLAHRLADC--RIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVR-IVPLPDGLEPEDDRK 95 (471)
Q Consensus 19 ~Il~~~~~~~GH~~p~~~La~~L~~r--Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~ 95 (471)
|||++-....|++.-+.++.++|+++ +.+|++++.+.+.+.++.. +.+. ++.++..... .
T Consensus 1 rILii~~~~iGD~vl~tp~l~~Lk~~~P~a~I~~l~~~~~~~l~~~~-------------p~vd~vi~~~~~~~~----~ 63 (344)
T TIGR02201 1 RILLIKLRHHGDMLLTTPVISSLKKNYPDAKIDVLLYQETIPILSEN-------------PDINALYGLDRKKAK----A 63 (344)
T ss_pred CEEEEEeccccceeeHHHHHHHHHHHCCCCEEEEEECcChHHHHhcC-------------CCccEEEEeChhhhc----c
Confidence 68999999999999999999999986 8999999999988877754 2343 2333211000 0
Q ss_pred cHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEEE
Q 012083 96 DEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKASI 154 (471)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~~ 154 (471)
.. ..+. ...+++..++. .++|++|.-........++...|.|.-+-
T Consensus 64 ~~----~~~~-----~~~~l~~~lr~----~~yD~vidl~~~~~s~ll~~l~~a~~riG 109 (344)
T TIGR02201 64 GE----RKLA-----NQFHLIKVLRA----NRYDLVVNLTDQWMVAILVKLLNARVKIG 109 (344)
T ss_pred hH----HHHH-----HHHHHHHHHHh----CCCCEEEECCcchHHHHHHHhcCCCeEEe
Confidence 00 0110 11233444554 89999996554556677888889996553
|
This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II. |
| >PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=96.29 E-value=1.6 Score=44.63 Aligned_cols=64 Identities=20% Similarity=0.181 Sum_probs=45.7
Q ss_pred CCCcEEEeccchh-hhhccCcceeeeec---cC-cchhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeecC
Q 012083 343 ADFGKMVKWAPQE-KVLAHPSVACYLTH---CG-WNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEP 413 (471)
Q Consensus 343 ~~nv~~~~~vpq~-~lL~~~~~~~~ItH---gG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~ 413 (471)
.++|.+.+|..+. .+|+.+++ ||.. -| -+++.||+++|+|+|+... ..+...+.+ -..|..++.
T Consensus 454 ~d~V~FlG~~~Dv~~~LaaADV--fVlPS~~EGfp~vlLEAMA~GlPVVATdv----GG~~EiV~d-G~nG~LVp~ 522 (578)
T PRK15490 454 LERILFVGASRDVGYWLQKMNV--FILFSRYEGLPNVLIEAQMVGVPVISTPA----GGSAECFIE-GVSGFILDD 522 (578)
T ss_pred CCcEEECCChhhHHHHHHhCCE--EEEcccccCccHHHHHHHHhCCCEEEeCC----CCcHHHccc-CCcEEEECC
Confidence 4788888886543 57866766 7753 34 5699999999999998754 345566666 367888864
|
|
| >PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.011 Score=49.67 Aligned_cols=98 Identities=20% Similarity=0.125 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCCcccHHHHHHHHHhhccHH
Q 012083 32 ASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDDRKDEAKMTRSISKVMPGY 111 (471)
Q Consensus 32 ~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (471)
.-+..|+++|.++||+|++++........+ ....++.+..++-..... ......++ ..
T Consensus 5 ~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~--~~~~~~~~--------~~ 62 (160)
T PF13579_consen 5 RYVRELARALAARGHEVTVVTPQPDPEDDE------------EEEDGVRVHRLPLPRRPW--PLRLLRFL--------RR 62 (160)
T ss_dssp HHHHHHHHHHHHTT-EEEEEEE---GGG-S------------EEETTEEEEEE--S-SSS--GGGHCCHH--------HH
T ss_pred HHHHHHHHHHHHCCCEEEEEecCCCCcccc------------cccCCceEEeccCCccch--hhhhHHHH--------HH
Confidence 346789999999999999999765554221 112377777765221111 00111111 12
Q ss_pred HHHHHHHHhcccCCCCeeEEEECCCcc-hHHHHHH-HcCCceEEEeC
Q 012083 112 LEELIQKINQQEEDEKITCVIADVTFG-WALQVAA-KLELKKASIYT 156 (471)
Q Consensus 112 ~~~ll~~l~~~~~~~~pD~vV~D~~~~-~~~~~A~-~lgiP~v~~~~ 156 (471)
+..++ .... .+||+|.+..... ....+++ ..++|+|....
T Consensus 63 ~~~~l-~~~~----~~~Dvv~~~~~~~~~~~~~~~~~~~~p~v~~~h 104 (160)
T PF13579_consen 63 LRRLL-AARR----ERPDVVHAHSPTAGLVAALARRRRGIPLVVTVH 104 (160)
T ss_dssp HHHHC-HHCT-------SEEEEEHHHHHHHHHHHHHHHT--EEEE-S
T ss_pred HHHHH-hhhc----cCCeEEEecccchhHHHHHHHHccCCcEEEEEC
Confidence 23333 1122 8999999887432 2333444 88999998653
|
|
| >TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.76 Score=44.27 Aligned_cols=102 Identities=10% Similarity=0.096 Sum_probs=68.5
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhC--CCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEE-EeCCCCCCCCCCcc
Q 012083 19 HVLLVSFPAQGHVASLMKLAHRLADC--RIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRI-VPLPDGLEPEDDRK 95 (471)
Q Consensus 19 ~Il~~~~~~~GH~~p~~~La~~L~~r--Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~~ 95 (471)
|||++-..+.|++.-..++.++|++. +.+|++++.+.+.+.++.. +.+.- +.++.. .
T Consensus 1 rILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~~~~-------------p~id~v~~~~~~----~--- 60 (334)
T TIGR02195 1 KILVIGPSWVGDMVMAQSLYRLLKKRYPQAVIDVLAPAWCRPLLERM-------------PEIRQAIDMPLG----H--- 60 (334)
T ss_pred CEEEEccchhHHHHHHHHHHHHHHHHCCCCEEEEEechhhHHHHhcC-------------chhceeeecCCc----c---
Confidence 68999999999999999999999986 8999999998887777644 13322 222111 0
Q ss_pred cHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEE
Q 012083 96 DEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKAS 153 (471)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~ 153 (471)
....+ ....+++.+++. .++|++|.-....-...++...|+|.-.
T Consensus 61 ~~~~~---------~~~~~~~~~lr~----~~yD~vi~l~~~~~s~ll~~~~~~~~ri 105 (334)
T TIGR02195 61 GALEL---------TERRRLGRSLRE----ERYDQAIVLPNSLKSALIPFFAGIPHRT 105 (334)
T ss_pred cchhh---------hHHHHHHHHHhh----cCCCEEEECCCCHHHHHHHHHcCCCcee
Confidence 00000 011234445554 7999999766555666677777888644
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=95.91 E-value=0.29 Score=47.20 Aligned_cols=107 Identities=15% Similarity=0.149 Sum_probs=73.7
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhC--CCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCCcc
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADC--RIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDDRK 95 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~r--Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 95 (471)
|||+++-...-|++.-..++-+.|+++ +.++++++.+.+.+.+... +.+.-+..-+. ...
T Consensus 2 ~kIliir~~~iGD~vlt~p~~~~lk~~~P~a~i~~~~~~~~~~i~~~~-------------p~I~~vi~~~~-----~~~ 63 (334)
T COG0859 2 MKILVIRLSKLGDVVLTLPLLRTLKKAYPNAKIDVLVPKGFAPILKLN-------------PEIDKVIIIDK-----KKK 63 (334)
T ss_pred ceEEEEeccchhHHHhHHHHHHHHHHHCCCCEEEEEeccchHHHHhcC-------------hHhhhhccccc-----ccc
Confidence 899999999999999999999999998 5999999999998877654 12222211000 011
Q ss_pred cHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEEEeC
Q 012083 96 DEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKASIYT 156 (471)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~~~~ 156 (471)
. ........+.+.++. .++|+||.=....-...++...++|.-.-+.
T Consensus 64 ~----------~~~~~~~~l~~~lr~----~~yD~vidl~~~~ksa~l~~~~~~~~r~g~~ 110 (334)
T COG0859 64 G----------LGLKERLALLRTLRK----ERYDAVIDLQGLLKSALLALLLGIPFRIGFD 110 (334)
T ss_pred c----------cchHHHHHHHHHhhc----cCCCEEEECcccHHHHHHHHHhCCCcccccc
Confidence 1 111223344555554 7899999766666667777788888777443
|
|
| >COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=95.83 E-value=1.4 Score=39.89 Aligned_cols=96 Identities=20% Similarity=0.157 Sum_probs=55.2
Q ss_pred EEEEecCccc--cCCHHHHH---H-HHHHHHhCCCCEEEEEcCCCCCCCCCCCCchhHHhhCCC-cEE-----Eeccchh
Q 012083 288 VIYAAFGSIS--KLSQQQFN---E-LALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADF-GKM-----VKWAPQE 355 (471)
Q Consensus 288 vv~vs~GS~~--~~~~~~~~---~-~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~n-v~~-----~~~vpq~ 355 (471)
|-++-.|+.. .+.++... . +.+.+++.+.+|+++..... .+....-+.+++... +.+ .++=|+-
T Consensus 164 vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l~~~g~~~lisfSRRT----p~~~~s~l~~~l~s~~~i~w~~~d~g~NPY~ 239 (329)
T COG3660 164 VAVLVGGNNKAFVFQEDKAHQFASLLVKILENQGGSFLISFSRRT----PDTVKSILKNNLNSSPGIVWNNEDTGYNPYI 239 (329)
T ss_pred EEEEecCCCCCCccCHHHHHHHHHHHHHHHHhCCceEEEEeecCC----cHHHHHHHHhccccCceeEeCCCCCCCCchH
Confidence 4444455553 33344433 2 55667889999999987652 111111111111111 111 1445888
Q ss_pred hhhccCcceeeeeccCcchhhHhhhcCCceeec
Q 012083 356 KVLAHPSVACYLTHCGWNSTMEGISMGVPFLCW 388 (471)
Q Consensus 356 ~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~ 388 (471)
+.|+.++. .++|--..|..+||.+.|+|+-++
T Consensus 240 ~~La~Ady-ii~TaDSinM~sEAasTgkPv~~~ 271 (329)
T COG3660 240 DMLAAADY-IISTADSINMCSEAASTGKPVFIL 271 (329)
T ss_pred HHHhhcce-EEEecchhhhhHHHhccCCCeEEE
Confidence 99966554 355666788889999999999665
|
|
| >PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria | Back alignment and domain information |
|---|
Probab=95.68 E-value=0.079 Score=45.16 Aligned_cols=95 Identities=13% Similarity=0.048 Sum_probs=58.6
Q ss_pred hCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCCcccHHHHHHHHHhhccHHHHHHHHHHhcc
Q 012083 43 DCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDDRKDEAKMTRSISKVMPGYLEELIQKINQQ 122 (471)
Q Consensus 43 ~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~ 122 (471)
++||+|+|+|........ +|++...+...-............++.-....+. +...+.+|++.
T Consensus 1 q~gh~v~fl~~~~~~~~~----------------~GV~~~~y~~~~~~~~~~~~~~~~~e~~~~rg~a-v~~a~~~L~~~ 63 (171)
T PF12000_consen 1 QRGHEVVFLTERKRPPIP----------------PGVRVVRYRPPRGPTPGTHPYVRDFEAAVLRGQA-VARAARQLRAQ 63 (171)
T ss_pred CCCCEEEEEecCCCCCCC----------------CCcEEEEeCCCCCCCCCCCcccccHHHHHHHHHH-HHHHHHHHHHc
Confidence 479999999965544322 2777777654222222222222333433333333 44455666666
Q ss_pred cCCCCeeEEEECCCcchHHHHHHHc-CCceEEEeC
Q 012083 123 EEDEKITCVIADVTFGWALQVAAKL-ELKKASIYT 156 (471)
Q Consensus 123 ~~~~~pD~vV~D~~~~~~~~~A~~l-giP~v~~~~ 156 (471)
+ ..||+||.-...-.+.-+-+.+ ++|++.+.-
T Consensus 64 G--f~PDvI~~H~GWGe~Lflkdv~P~a~li~Y~E 96 (171)
T PF12000_consen 64 G--FVPDVIIAHPGWGETLFLKDVFPDAPLIGYFE 96 (171)
T ss_pred C--CCCCEEEEcCCcchhhhHHHhCCCCcEEEEEE
Confidence 6 9999999987655677788888 899998753
|
This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important. |
| >PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional | Back alignment and domain information |
|---|
Probab=95.60 E-value=2.3 Score=40.76 Aligned_cols=46 Identities=17% Similarity=0.182 Sum_probs=41.3
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhC--CCeEEEEeCCcchhhhHHh
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADC--RIKVTFVTTEFICERIKES 63 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~r--Gh~Vt~~~~~~~~~~~~~~ 63 (471)
||||++-....|++.-..++.+.|++. +.+||+++.+.+.+.++..
T Consensus 1 m~ILii~~~~iGD~v~~~p~~~~lk~~~P~a~I~~l~~~~~~~l~~~~ 48 (322)
T PRK10964 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIQFDWVVEEGFAQIPSWH 48 (322)
T ss_pred CeEEEEeccchHHHHhHHHHHHHHHHhCCCCEEEEEECHHHHHHHhcC
Confidence 599999999999999999999999996 9999999998887766543
|
|
| >PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Probab=95.26 E-value=0.18 Score=38.09 Aligned_cols=66 Identities=17% Similarity=0.115 Sum_probs=44.3
Q ss_pred ccCcchhhHhhhcCCceeecccccchhhhHHHHHhhhc-ceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHH
Q 012083 369 HCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWK-IGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKEL 447 (471)
Q Consensus 369 HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G-~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~ 447 (471)
+|-..-+.|++++|+|+|+-.. ......+.. | -++.. . +.+++.+++..+++|++.+++.++-+.+
T Consensus 9 ~~~~~r~~E~~a~G~~vi~~~~----~~~~~~~~~--~~~~~~~-----~--~~~el~~~i~~ll~~~~~~~~ia~~a~~ 75 (92)
T PF13524_consen 9 DGPNMRIFEAMACGTPVISDDS----PGLREIFED--GEHIITY-----N--DPEELAEKIEYLLENPEERRRIAKNARE 75 (92)
T ss_pred CCCchHHHHHHHCCCeEEECCh----HHHHHHcCC--CCeEEEE-----C--CHHHHHHHHHHHHCCHHHHHHHHHHHHH
Confidence 5556689999999999998854 222222222 4 23333 2 8899999999999998655555444433
|
|
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
Probab=95.21 E-value=0.42 Score=45.96 Aligned_cols=93 Identities=16% Similarity=0.226 Sum_probs=54.7
Q ss_pred eccchh---hhhccCcceeee--ec-cC-cchhhHhhhcCCceeeccccc--chhh---hHHHHHhh----------hcc
Q 012083 350 KWAPQE---KVLAHPSVACYL--TH-CG-WNSTMEGISMGVPFLCWPWGH--DHLY---IKSCICDD----------WKI 407 (471)
Q Consensus 350 ~~vpq~---~lL~~~~~~~~I--tH-gG-~~s~~eal~~GvP~l~~P~~~--DQ~~---na~~v~~~----------~G~ 407 (471)
.++|+. .+++.+++ ++ ++ .| -.++.||+++|+|+|+.-..+ |... |+..+... .++
T Consensus 196 ~~v~~~~l~~~y~~aDv--~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~ 273 (331)
T PHA01630 196 TPLPDDDIYSLFAGCDI--LFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHV 273 (331)
T ss_pred ccCCHHHHHHHHHhCCE--EEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccccccCCccc
Confidence 346654 46766776 55 23 22 568999999999999976432 3221 21111100 134
Q ss_pred eeeecCCCCCCcCHhHHHHHHHHHhCc---HHHHHHHHHHHHHHHH
Q 012083 408 GLWLEPDDNGIIGRHEIKRKVDELLSN---DVVRKNALKLKELAQK 450 (471)
Q Consensus 408 G~~~~~~~~~~~~~~~l~~~i~~ll~~---~~~~~~a~~l~~~~~~ 450 (471)
|..+.+ +.+++.+++.++|.| ++++++.+.-+...++
T Consensus 274 G~~v~~------~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~ 313 (331)
T PHA01630 274 GYFLDP------DIEDAYQKLLEALANWTPEKKKENLEGRAILYRE 313 (331)
T ss_pred ccccCC------CHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHH
Confidence 555542 567888888888887 4566655555554444
|
|
| >PHA01633 putative glycosyl transferase group 1 | Back alignment and domain information |
|---|
Probab=95.15 E-value=0.56 Score=44.99 Aligned_cols=85 Identities=9% Similarity=-0.003 Sum_probs=55.1
Q ss_pred hCCCcEEE---eccchh---hhhccCcceeeeec---cC-cchhhHhhhcCCceeeccc------ccch------hhhHH
Q 012083 342 VADFGKMV---KWAPQE---KVLAHPSVACYLTH---CG-WNSTMEGISMGVPFLCWPW------GHDH------LYIKS 399 (471)
Q Consensus 342 ~~~nv~~~---~~vpq~---~lL~~~~~~~~ItH---gG-~~s~~eal~~GvP~l~~P~------~~DQ------~~na~ 399 (471)
.++++.+. +++++. .+++.+++ ||.- -| -++++||+++|+|+|+--. .+|+ .+++.
T Consensus 199 l~~~V~f~g~~G~~~~~dl~~~y~~aDi--fV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~ 276 (335)
T PHA01633 199 VPANVHFVAEFGHNSREYIFAFYGAMDF--TIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVE 276 (335)
T ss_pred CCCcEEEEecCCCCCHHHHHHHHHhCCE--EEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHH
Confidence 36778887 455543 56766766 7764 23 4578999999999998633 2232 22222
Q ss_pred HHH--hhhcceeeecCCCCCCcCHhHHHHHHHHHhCc
Q 012083 400 CIC--DDWKIGLWLEPDDNGIIGRHEIKRKVDELLSN 434 (471)
Q Consensus 400 ~v~--~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~ 434 (471)
... + .|.|..+ ...++++++++|.+++..
T Consensus 277 ~~~~~~-~g~g~~~-----~~~d~~~la~ai~~~~~~ 307 (335)
T PHA01633 277 EYYDKE-HGQKWKI-----HKFQIEDMANAIILAFEL 307 (335)
T ss_pred HhcCcc-cCceeee-----cCCCHHHHHHHHHHHHhc
Confidence 222 2 2566666 447999999999999543
|
|
| >PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family | Back alignment and domain information |
|---|
Probab=95.07 E-value=0.064 Score=47.02 Aligned_cols=116 Identities=17% Similarity=0.189 Sum_probs=62.9
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCC-----
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPED----- 92 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~----- 92 (471)
||||+.-=-+. +---+.+|+++|.+.||+|+++.+...+.-.-.+. .....++...........+
T Consensus 1 M~ILlTNDDGi-~a~Gi~aL~~~L~~~g~~V~VvAP~~~~Sg~g~si---------t~~~pl~~~~~~~~~~~~~~~~~~ 70 (196)
T PF01975_consen 1 MRILLTNDDGI-DAPGIRALAKALSALGHDVVVVAPDSEQSGTGHSI---------TLHKPLRVTEVEPGHDPGGVEAYA 70 (196)
T ss_dssp SEEEEE-SS-T-TSHHHHHHHHHHTTTSSEEEEEEESSSTTTSTTS-----------SSSEEEEEEEE-TTCCSTTEEEE
T ss_pred CeEEEEcCCCC-CCHHHHHHHHHHHhcCCeEEEEeCCCCCcCcceee---------cCCCCeEEEEEEecccCCCCCEEE
Confidence 47777654444 44557899999988899999999988766543321 2223555544321111111
Q ss_pred CcccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECC----------Ccc---hHHHHHHHcCCceEEEeCc
Q 012083 93 DRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADV----------TFG---WALQVAAKLELKKASIYTS 157 (471)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~----------~~~---~~~~~A~~lgiP~v~~~~~ 157 (471)
-...+.+ +-.+. +..++.. .+||+||+.. +++ +|+.-|...|||.|.++..
T Consensus 71 v~GTPaD-cv~~a------l~~~~~~-------~~pDLViSGiN~G~N~g~~v~~SGTVgAA~ea~~~GipaIA~S~~ 134 (196)
T PF01975_consen 71 VSGTPAD-CVKLA------LDGLLPD-------KKPDLVISGINHGANLGTDVLYSGTVGAAMEAALRGIPAIAVSLD 134 (196)
T ss_dssp ESS-HHH-HHHHH------HHCTSTT-------SS-SEEEEEEEES---GGGGGG-HHHHHHHHHHHTTSEEEEEEEE
T ss_pred EcCcHHH-HHHHH------HHhhhcc-------CCCCEEEECCCCCccCCcCcccccHHHHHHHHHHcCCCeEEEecc
Confidence 1122221 11111 2222222 4699999642 222 4566778899999998753
|
This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A .... |
| >PRK13932 stationary phase survival protein SurE; Provisional | Back alignment and domain information |
|---|
Probab=93.43 E-value=1.1 Score=40.96 Aligned_cols=114 Identities=13% Similarity=0.114 Sum_probs=64.3
Q ss_pred CCcEEEEEcCCCcc-cHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCC--CCCCCC
Q 012083 16 TNVHVLLVSFPAQG-HVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPD--GLEPED 92 (471)
Q Consensus 16 ~~~~Il~~~~~~~G-H~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~ 92 (471)
++||||+.- --| |.--+.+|+++|.+.| +|+++.+...+.-.-.+. +....+++..+.. ......
T Consensus 4 ~~M~ILltN--DDGi~a~Gi~aL~~~l~~~g-~V~VvAP~~~~Sg~g~ai---------t~~~pl~~~~~~~~~~~~~y~ 71 (257)
T PRK13932 4 KKPHILVCN--DDGIEGEGIHVLAASMKKIG-RVTVVAPAEPHSGMSHAM---------TLGVPLRIKEYQKNNRFFGYT 71 (257)
T ss_pred CCCEEEEEC--CCCCCCHHHHHHHHHHHhCC-CEEEEcCCCCCCCCcccc---------cCCCCeEEEEEccCCCceEEE
Confidence 457988764 333 3345778899998888 799998877665443321 2233566665531 110000
Q ss_pred CcccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECC----------Ccc---hHHHHHHHcCCceEEEeC
Q 012083 93 DRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADV----------TFG---WALQVAAKLELKKASIYT 156 (471)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~----------~~~---~~~~~A~~lgiP~v~~~~ 156 (471)
-...+.+ | +.--+..+.. .+||+||+.. +++ +|+.-|..+|||.|.+|.
T Consensus 72 v~GTPaD-C----------V~lal~~~~~----~~pDLVvSGIN~G~N~G~dv~ySGTVgAA~Ea~~~GiPsIA~S~ 133 (257)
T PRK13932 72 VSGTPVD-C----------IKVALSHILP----EKPDLIVSGINYGSNTATNTLYSGTVAAALEGAIQGIPSLAFSL 133 (257)
T ss_pred EcCcHHH-H----------HHHHHHhhcC----CCCCEEEECCcCCCCCCcCEecchhHHHHHHHHHcCCCeEEEEc
Confidence 1112221 1 1111222222 5899999643 222 466777889999999885
|
|
| >PRK02261 methylaspartate mutase subunit S; Provisional | Back alignment and domain information |
|---|
Probab=93.33 E-value=1.2 Score=36.55 Aligned_cols=49 Identities=16% Similarity=0.102 Sum_probs=42.4
Q ss_pred CCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHh
Q 012083 15 KTNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKES 63 (471)
Q Consensus 15 ~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~ 63 (471)
+++.||++.+.++-+|-.-..-++..|..+|++|++++.....+.+.+.
T Consensus 1 ~~~~~vl~~~~~gD~H~lG~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~ 49 (137)
T PRK02261 1 MKKKTVVLGVIGADCHAVGNKILDRALTEAGFEVINLGVMTSQEEFIDA 49 (137)
T ss_pred CCCCEEEEEeCCCChhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHH
Confidence 3678999999999999999999999999999999999987665555444
|
|
| >PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A | Back alignment and domain information |
|---|
Probab=93.28 E-value=0.85 Score=38.66 Aligned_cols=32 Identities=25% Similarity=0.201 Sum_probs=25.1
Q ss_pred CCcccHHHHHHHHHHHHhCCCeEEEEeCCcch
Q 012083 26 PAQGHVASLMKLAHRLADCRIKVTFVTTEFIC 57 (471)
Q Consensus 26 ~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~ 57 (471)
...|=-.-+..|+++|+++||+|++++.....
T Consensus 10 ~~GG~e~~~~~l~~~l~~~G~~v~v~~~~~~~ 41 (177)
T PF13439_consen 10 NIGGAERVVLNLARALAKRGHEVTVVSPGVKD 41 (177)
T ss_dssp SSSHHHHHHHHHHHHHHHTT-EEEEEESS-TT
T ss_pred CCChHHHHHHHHHHHHHHCCCEEEEEEcCCCc
Confidence 35577788999999999999999999876444
|
|
| >cd02067 B12-binding B12 binding domain (B12-BD) | Back alignment and domain information |
|---|
Probab=93.17 E-value=0.72 Score=36.85 Aligned_cols=43 Identities=21% Similarity=0.230 Sum_probs=36.3
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhH
Q 012083 19 HVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIK 61 (471)
Q Consensus 19 ~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~ 61 (471)
||++.+.++-.|.....-++..|.++|++|.+.......+.+.
T Consensus 1 ~vl~~~~~~e~H~lG~~~~~~~l~~~G~~V~~lg~~~~~~~l~ 43 (119)
T cd02067 1 KVVIATVGGDGHDIGKNIVARALRDAGFEVIDLGVDVPPEEIV 43 (119)
T ss_pred CEEEEeeCCchhhHHHHHHHHHHHHCCCEEEECCCCCCHHHHH
Confidence 5889999999999999999999999999999887654444443
|
This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins. |
| >COG1618 Predicted nucleotide kinase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.67 E-value=0.65 Score=38.79 Aligned_cols=57 Identities=23% Similarity=0.262 Sum_probs=44.7
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCC
Q 012083 16 TNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPD 86 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 86 (471)
..|||++...|+.|-..-++.++..|.++|+.|-=+-++.-++--... |++.+.+..
T Consensus 4 ~~mki~ITG~PGvGKtTl~~ki~e~L~~~g~kvgGf~t~EVR~gGkR~--------------GF~Ivdl~t 60 (179)
T COG1618 4 MAMKIFITGRPGVGKTTLVLKIAEKLREKGYKVGGFITPEVREGGKRI--------------GFKIVDLAT 60 (179)
T ss_pred cceEEEEeCCCCccHHHHHHHHHHHHHhcCceeeeEEeeeeecCCeEe--------------eeEEEEccC
Confidence 359999999999999999999999999999999855444444322222 888888863
|
|
| >PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [] | Back alignment and domain information |
|---|
Probab=92.48 E-value=1.2 Score=38.24 Aligned_cols=115 Identities=18% Similarity=0.148 Sum_probs=59.8
Q ss_pred EcCCCcccHHHHHHHHHHH-HhC-CCeEEEEeCCcchhh--hHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCCcccHH
Q 012083 23 VSFPAQGHVASLMKLAHRL-ADC-RIKVTFVTTEFICER--IKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDDRKDEA 98 (471)
Q Consensus 23 ~~~~~~GH~~p~~~La~~L-~~r-Gh~Vt~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 98 (471)
+..++.||+.-|+.|.+.+ .++ .++..+++..+.... +.+.... ......+..+|....-. +...
T Consensus 3 ~v~gsGGHt~eml~L~~~~~~~~~~~~~~ivt~~d~~S~~k~~~~~~~--------~~~~~~~~~~~r~r~v~---q~~~ 71 (170)
T PF08660_consen 3 VVLGSGGHTAEMLRLLKALDNDRYQPRTYIVTEGDKQSRSKAEQLEKS--------SSKRHKILEIPRAREVG---QSYL 71 (170)
T ss_pred EEEcCcHHHHHHHHHHHHhhhhcCCCcEEEEEcCCcccHHHHHHHHHh--------ccccceeeccceEEEec---hhhH
Confidence 3347899999999999999 333 566666666554332 2221100 00011333333211111 1111
Q ss_pred HHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcc--hHHHHHHHc------CCceEEEeC
Q 012083 99 KMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFG--WALQVAAKL------ELKKASIYT 156 (471)
Q Consensus 99 ~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~--~~~~~A~~l------giP~v~~~~ 156 (471)
.....+.......+.-+ .. .+||+||+..... ....+|..+ |.+.|.+-+
T Consensus 72 ~~~~~~l~~~~~~~~il----~r----~rPdvii~nGpg~~vp~~~~~~l~~~~~~~~~kiIyIES 129 (170)
T PF08660_consen 72 TSIFTTLRAFLQSLRIL----RR----ERPDVIISNGPGTCVPVCLAAKLLRLLGLRGSKIIYIES 129 (170)
T ss_pred hhHHHHHHHHHHHHHHH----HH----hCCCEEEEcCCceeeHHHHHHHHHHHhhccCCcEEEEEe
Confidence 11111111122222222 22 6999999998765 556678888 899888754
|
|
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=92.23 E-value=0.72 Score=42.38 Aligned_cols=91 Identities=18% Similarity=0.211 Sum_probs=55.3
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhh-HHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCCccc
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERI-KESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDDRKD 96 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 96 (471)
|||+++...+. -..|++.|.++||+|+..+........ .+.+ +..... +.
T Consensus 1 m~ILvlGGT~e-----gr~la~~L~~~g~~v~~s~~t~~~~~~~~~~g-------------~~~v~~--g~--------- 51 (256)
T TIGR00715 1 MTVLLMGGTVD-----SRAIAKGLIAQGIEILVTVTTSEGKHLYPIHQ-------------ALTVHT--GA--------- 51 (256)
T ss_pred CeEEEEechHH-----HHHHHHHHHhCCCeEEEEEccCCccccccccC-------------CceEEE--CC---------
Confidence 47777653332 568999999999999987776654322 2210 112211 00
Q ss_pred HHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchH-------HHHHHHcCCceEEEe
Q 012083 97 EAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWA-------LQVAAKLELKKASIY 155 (471)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~-------~~~A~~lgiP~v~~~ 155 (471)
+ -...+++++++ .++|+|| |..-++| ..+|+.+|||++.+-
T Consensus 52 l----------~~~~l~~~l~~-------~~i~~VI-DAtHPfA~~is~~a~~a~~~~~ipylR~e 99 (256)
T TIGR00715 52 L----------DPQELREFLKR-------HSIDILV-DATHPFAAQITTNATAVCKELGIPYVRFE 99 (256)
T ss_pred C----------CHHHHHHHHHh-------cCCCEEE-EcCCHHHHHHHHHHHHHHHHhCCcEEEEE
Confidence 0 01124455666 8999887 5444433 578899999999963
|
This enzyme was found to be a monomer by gel filtration. |
| >TIGR02919 accessory Sec system glycosyltransferase GtfB | Back alignment and domain information |
|---|
Probab=91.48 E-value=4 Score=40.85 Aligned_cols=176 Identities=14% Similarity=0.107 Sum_probs=101.9
Q ss_pred ccCcEEEEcchhhhchhhhhhCC-----CcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccCCHHH
Q 012083 229 EASDRILCTWFHELAPSANKILP-----SIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQ 303 (471)
Q Consensus 229 ~~~~~~l~~s~~~l~~~~~~~~~-----~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~ 303 (471)
.+-+.+++.|..+-+.- ....+ .+.++|-+...+ ...+..+.++.++ ..+.
T Consensus 238 ~~~~~iIv~T~~q~~di-~~r~~~~~~~~~ip~g~i~~~~----------------~~~r~~~~~l~~t-------~s~~ 293 (438)
T TIGR02919 238 TRNKKIIIPNKNEYEKI-KELLDNEYQEQISQLGYLYPFK----------------KDNKYRKQALILT-------NSDQ 293 (438)
T ss_pred cccCeEEeCCHHHHHHH-HHHhCcccCceEEEEEEEEeec----------------cccCCcccEEEEC-------CHHH
Confidence 56778888885543321 11111 456666663210 1222334577776 2556
Q ss_pred HHHHHHHHHhC-CCCEEEEEcCCCCCCCCCCCCchhHHhhCCCcEEE-eccch--hhhhccCcceeeeeccC--cchhhH
Q 012083 304 FNELALGLELA-GQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMV-KWAPQ--EKVLAHPSVACYLTHCG--WNSTME 377 (471)
Q Consensus 304 ~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~-~~vpq--~~lL~~~~~~~~ItHgG--~~s~~e 377 (471)
+..+....+++ +..|-+..+... ...|- .+ ++. +|+.+. ++.++ ..++..+++-+-|+||. .+++.|
T Consensus 294 I~~i~~Lv~~lPd~~f~Iga~te~----s~kL~-~L-~~y-~nvvly~~~~~~~l~~ly~~~dlyLdin~~e~~~~al~e 366 (438)
T TIGR02919 294 IEHLEEIVQALPDYHFHIAALTEM----SSKLM-SL-DKY-DNVKLYPNITTQKIQELYQTCDIYLDINHGNEILNAVRR 366 (438)
T ss_pred HHHHHHHHHhCCCcEEEEEecCcc----cHHHH-HH-Hhc-CCcEEECCcChHHHHHHHHhccEEEEccccccHHHHHHH
Confidence 66666666554 445555443221 01111 12 233 666655 77883 37999999999999977 679999
Q ss_pred hhhcCCceeecccccchhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHH
Q 012083 378 GISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKEL 447 (471)
Q Consensus 378 al~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~ 447 (471)
|+.+|+|++..=...... .... . |-.+. .-+.+++.++|.++|+|++.-+.+-..+++
T Consensus 367 A~~~G~pI~afd~t~~~~----~~i~--~-g~l~~-----~~~~~~m~~~i~~lL~d~~~~~~~~~~q~~ 424 (438)
T TIGR02919 367 AFEYNLLILGFEETAHNR----DFIA--S-ENIFE-----HNEVDQLISKLKDLLNDPNQFRELLEQQRE 424 (438)
T ss_pred HHHcCCcEEEEecccCCc----cccc--C-Cceec-----CCCHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 999999999874332111 1111 1 33442 236799999999999998543333333333
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. |
| >TIGR00087 surE 5'/3'-nucleotidase SurE | Back alignment and domain information |
|---|
Probab=91.26 E-value=2 Score=39.10 Aligned_cols=112 Identities=19% Similarity=0.124 Sum_probs=62.1
Q ss_pred cEEEEEcCCCcc-cHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCC--CCCCCCCc
Q 012083 18 VHVLLVSFPAQG-HVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPD--GLEPEDDR 94 (471)
Q Consensus 18 ~~Il~~~~~~~G-H~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~ 94 (471)
||||+.= --| |---+.+|+++|.+.| +|+++.+...+.-.-.+. +....+++..++. +.....-.
T Consensus 1 M~ILltN--DDGi~a~Gi~aL~~~l~~~g-~V~VvAP~~~~Sg~g~ai---------t~~~pl~~~~~~~~~~~~~~~v~ 68 (244)
T TIGR00087 1 MKILLTN--DDGIHSPGIRALYQALKELG-EVTVVAPARQRSGTGHSL---------TLFEPLRVGQVKVKNGAHIYAVD 68 (244)
T ss_pred CeEEEEC--CCCCCCHhHHHHHHHHHhCC-CEEEEeCCCCccccccCc---------CCCCCeEEEEeccCCCccEEEEc
Confidence 3666432 333 3334778999999988 899999987766554331 2234566665531 11000001
Q ss_pred ccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECC----------Ccc---hHHHHHHHcCCceEEEeC
Q 012083 95 KDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADV----------TFG---WALQVAAKLELKKASIYT 156 (471)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~----------~~~---~~~~~A~~lgiP~v~~~~ 156 (471)
..+.+ |-. --+..+.. .+||+||+.. +++ +|+.-|..+|||.|.+|.
T Consensus 69 GTPaD-cv~----------~gl~~l~~----~~pDLVvSGiN~G~N~g~~v~ySGTVgAA~ea~~~GipaiA~S~ 128 (244)
T TIGR00087 69 GTPTD-CVI----------LGINELMP----EVPDLVISGINAGENLGTDVTYSGTVGAAMEAAIHGVPAIAISL 128 (244)
T ss_pred CcHHH-HHH----------HHHHHhcc----CCCCeEEeccccCCCCCccEecchhHHHHHHHHHcCCCeEEEEe
Confidence 11211 111 11222222 5799998643 222 456777889999999875
|
E. coli SurE is Recommended cutoffs are 15 for homology, 40 for probable orthology, and 200 for orthology with full-length homology. |
| >PF02951 GSH-S_N: Prokaryotic glutathione synthetase, N-terminal domain; InterPro: IPR004215 Prokaryotic glutathione synthetase 6 | Back alignment and domain information |
|---|
Probab=90.49 E-value=0.42 Score=38.04 Aligned_cols=40 Identities=10% Similarity=0.072 Sum_probs=29.2
Q ss_pred cEEEEEcCCCcc---cHHHHHHHHHHHHhCCCeEEEEeCCcch
Q 012083 18 VHVLLVSFPAQG---HVASLMKLAHRLADCRIKVTFVTTEFIC 57 (471)
Q Consensus 18 ~~Il~~~~~~~G---H~~p~~~La~~L~~rGh~Vt~~~~~~~~ 57 (471)
|||+|+.-|-.+ .-.-.++|+.+.++|||+|.+++.....
T Consensus 1 Mki~fvmDpi~~i~~~kDTT~alm~eAq~RGhev~~~~~~dL~ 43 (119)
T PF02951_consen 1 MKIAFVMDPIESIKPYKDTTFALMLEAQRRGHEVFYYEPGDLS 43 (119)
T ss_dssp -EEEEEES-GGG--TTT-HHHHHHHHHHHTT-EEEEE-GGGEE
T ss_pred CeEEEEeCCHHHCCCCCChHHHHHHHHHHCCCEEEEEEcCcEE
Confidence 599999987655 4467889999999999999999887653
|
3.2.3 from EC (glutathione synthase) catalyses the conversion of gamma-L-glutamyl-L-cysteine and glycine to orthophosphate and glutathione in the presence of ATP. This is the second step in glutathione biosynthesis. The enzyme is inhibited by 7,8-dihydrofolate, methotrexate and trimethoprim. This domain is the N terminus of the enzyme.; GO: 0004363 glutathione synthase activity, 0006750 glutathione biosynthetic process; PDB: 1GLV_A 1GSA_A 1GSH_A 2GLT_A. |
| >PRK13933 stationary phase survival protein SurE; Provisional | Back alignment and domain information |
|---|
Probab=90.11 E-value=5 Score=36.72 Aligned_cols=113 Identities=16% Similarity=0.168 Sum_probs=59.9
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCC-CCCCC-C-CCc
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLP-DGLEP-E-DDR 94 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~-~-~~~ 94 (471)
||||+.-=-+. |---+.+|+++|++ +|+|+++.+...+.-.-.+. +....++...+. ++... . .-.
T Consensus 1 M~ILvtNDDGi-~apGl~aL~~~l~~-~~~V~VvAP~~~~Sg~g~si---------t~~~pl~~~~~~~~~~~~~~~~v~ 69 (253)
T PRK13933 1 MNILLTNDDGI-NAEGINTLAELLSK-YHEVIIVAPENQRSASSHSI---------TIYEPIIIKEVKLEGINSKAYSIS 69 (253)
T ss_pred CeEEEEcCCCC-CChhHHHHHHHHHh-CCcEEEEccCCCCccccccc---------cCCCCeEEEeeccCCCCccEEEEC
Confidence 46666532211 22237788999975 68999999887766443321 222345555443 10000 0 001
Q ss_pred ccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEEC----------CCcc---hHHHHHHHcCCceEEEeC
Q 012083 95 KDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIAD----------VTFG---WALQVAAKLELKKASIYT 156 (471)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D----------~~~~---~~~~~A~~lgiP~v~~~~ 156 (471)
..+.+ |- .--+..+.. .+||+||+. .+++ +|+.-|...|||.|.+|.
T Consensus 70 GTPaD-cV----------~lal~~l~~----~~pDLVvSGIN~G~N~g~dv~ySGTVgAA~ea~~~GiPsiA~S~ 129 (253)
T PRK13933 70 GTPAD-CV----------RVALDKLVP----DNIDMVISGINKGLNIGNDILYSGTVSAAIEGAIYKVPSIAVSA 129 (253)
T ss_pred CcHHH-HH----------HHHHHHhcC----CCCCEEEECCcCCCCCCcCCccchhHHHHHHHHHcCCCeEEEEe
Confidence 11211 11 111222222 589999964 2333 566777899999999875
|
|
| >COG0496 SurE Predicted acid phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=90.07 E-value=1.3 Score=40.24 Aligned_cols=113 Identities=20% Similarity=0.220 Sum_probs=64.4
Q ss_pred cEEEEEcCCCcc-cHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCCccc
Q 012083 18 VHVLLVSFPAQG-HVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDDRKD 96 (471)
Q Consensus 18 ~~Il~~~~~~~G-H~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 96 (471)
||||+.- --| |.--+.+|+++|. .+++|+++.+...+.-+-.+. +....++...+.... ..-...
T Consensus 1 mrILlTN--DDGi~a~Gi~aL~~al~-~~~dV~VVAP~~~qSg~s~sl---------Tl~~Plr~~~~~~~~--~av~GT 66 (252)
T COG0496 1 MRILLTN--DDGIHAPGIRALARALR-EGADVTVVAPDREQSGASHSL---------TLHEPLRVRQVDNGA--YAVNGT 66 (252)
T ss_pred CeEEEec--CCccCCHHHHHHHHHHh-hCCCEEEEccCCCCccccccc---------ccccCceeeEeccce--EEecCC
Confidence 3665543 233 4445778888888 999999999988876554332 222345544443300 000112
Q ss_pred HHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECC----------Cc---chHHHHHHHcCCceEEEeCch
Q 012083 97 EAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADV----------TF---GWALQVAAKLELKKASIYTSA 158 (471)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~----------~~---~~~~~~A~~lgiP~v~~~~~~ 158 (471)
+.+ |-.+ .+..++++ .+||+||+.. .+ .+|+.=|..+|||.|.+|...
T Consensus 67 PaD-CV~l------al~~l~~~-------~~pDLVvSGIN~G~Nlg~dv~ySGTVaaA~Ea~~~GipsIA~S~~~ 127 (252)
T COG0496 67 PAD-CVIL------GLNELLKE-------PRPDLVVSGINAGANLGDDVIYSGTVAAAMEAALLGIPAIAISLAY 127 (252)
T ss_pred hHH-HHHH------HHHHhccC-------CCCCEEEeCccCCCccccceeeeehHHHHHHHHHcCccceeeeehh
Confidence 221 1111 13344433 6799998643 22 256677889999999987643
|
|
| >KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=88.98 E-value=22 Score=33.92 Aligned_cols=127 Identities=11% Similarity=-0.062 Sum_probs=75.7
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCCcc
Q 012083 16 TNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDDRK 95 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 95 (471)
++.+++++..|--||--.|.-=|..|++.|.+|.+++-.......+- ...++|+++.++..-.......
T Consensus 11 ~k~ra~vvVLGDvGRSPRMqYHA~Sla~~gf~VdliGy~~s~p~e~l-----------~~hprI~ih~m~~l~~~~~~p~ 79 (444)
T KOG2941|consen 11 KKKRAIVVVLGDVGRSPRMQYHALSLAKLGFQVDLIGYVESIPLEEL-----------LNHPRIRIHGMPNLPFLQGGPR 79 (444)
T ss_pred ccceEEEEEecccCCChHHHHHHHHHHHcCCeEEEEEecCCCChHHH-----------hcCCceEEEeCCCCcccCCCch
Confidence 46789999999999999999999999999999999876554332211 2246899999875432221111
Q ss_pred cHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCC-cchHHHHH----HHcCCceEEEeCchHHH
Q 012083 96 DEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVT-FGWALQVA----AKLELKKASIYTSAPGI 161 (471)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~-~~~~~~~A----~~lgiP~v~~~~~~~~~ 161 (471)
-..-.++.+. .....+-.+... .++|.+++-.- +.....+| ...|-.+++=|....+.
T Consensus 80 ~~~l~lKvf~-Qfl~Ll~aL~~~-------~~~~~ilvQNPP~iPtliv~~~~~~l~~~KfiIDWHNy~Ys 142 (444)
T KOG2941|consen 80 VLFLPLKVFW-QFLSLLWALFVL-------RPPDIILVQNPPSIPTLIVCVLYSILTGAKFIIDWHNYGYS 142 (444)
T ss_pred hhhhHHHHHH-HHHHHHHHHHhc-------cCCcEEEEeCCCCCchHHHHHHHHHHhcceEEEEehhhHHH
Confidence 1111122221 111122233332 68888876543 33444444 44466777777665554
|
|
| >PRK13935 stationary phase survival protein SurE; Provisional | Back alignment and domain information |
|---|
Probab=88.93 E-value=4.9 Score=36.71 Aligned_cols=113 Identities=12% Similarity=0.067 Sum_probs=60.0
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCC--CCCCCCCcc
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPD--GLEPEDDRK 95 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~ 95 (471)
||||+.-=-+. |---+.+|+++|++ +|+|+++.+...+.-.-.+. +....++...+.. +...-.-..
T Consensus 1 M~ILlTNDDGi-~a~Gi~aL~~~l~~-~~~V~VvAP~~~qSg~g~ai---------t~~~pl~~~~~~~~~~~~~y~v~G 69 (253)
T PRK13935 1 MNILVTNDDGI-TSPGIIILAEYLSE-KHEVFVVAPDKERSATGHAI---------TIRVPLWAKKVFISERFVAYATTG 69 (253)
T ss_pred CeEEEECCCCC-CCHHHHHHHHHHHh-CCcEEEEccCCCCccccccc---------cCCCCceEEEeecCCCccEEEECC
Confidence 36665542222 33447788889975 68999999987766544331 1222455544421 110000111
Q ss_pred cHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEEC----------CCcc---hHHHHHHHcCCceEEEeC
Q 012083 96 DEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIAD----------VTFG---WALQVAAKLELKKASIYT 156 (471)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D----------~~~~---~~~~~A~~lgiP~v~~~~ 156 (471)
.+.+ |- .--+..+.. .+||+||+. .+++ +|+.-|..+|||.|.+|.
T Consensus 70 TPaD-cV----------~lal~~~~~----~~pDLVvSGIN~G~N~g~~v~ySGTVgAA~ea~~~GiPaiA~S~ 128 (253)
T PRK13935 70 TPAD-CV----------KLGYDVIMD----KKVDLVISGINRGPNLGTDVLYSGTVSGALEGAMMGVPSIAISS 128 (253)
T ss_pred cHHH-HH----------HHHHHhhcc----CCCCEEEeCCccCCCCCcCCcccHhHHHHHHHHhcCCCeEEEEc
Confidence 2211 11 111222222 589999964 3333 456677889999999985
|
|
| >TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family | Back alignment and domain information |
|---|
Probab=88.92 E-value=3.6 Score=36.20 Aligned_cols=107 Identities=7% Similarity=-0.007 Sum_probs=69.4
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCCccc
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDDRKD 96 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 96 (471)
+.||++.+.++-.|-....-++..|..+|++|++++..-..+.+.+.-. ..+..++.+.-.+.
T Consensus 84 ~~~vv~~t~~gd~H~lG~~~v~~~l~~~G~~vi~LG~~vp~e~~v~~~~----------~~~pd~v~lS~~~~------- 146 (197)
T TIGR02370 84 LGKVVCGVAEGDVHDIGKNIVVTMLRANGFDVIDLGRDVPIDTVVEKVK----------KEKPLMLTGSALMT------- 146 (197)
T ss_pred CCeEEEEeCCCchhHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHHHH----------HcCCCEEEEccccc-------
Confidence 4699999999999999999999999999999999988776665554421 12444544422111
Q ss_pred HHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceE
Q 012083 97 EAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKA 152 (471)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v 152 (471)
...+.++++++.+++.+...++-++|..... ....|+++|.=.+
T Consensus 147 ----------~~~~~~~~~i~~l~~~~~~~~v~i~vGG~~~--~~~~~~~~gad~~ 190 (197)
T TIGR02370 147 ----------TTMYGQKDINDKLKEEGYRDSVKFMVGGAPV--TQDWADKIGADVY 190 (197)
T ss_pred ----------cCHHHHHHHHHHHHHcCCCCCCEEEEEChhc--CHHHHHHhCCcEE
Confidence 1122345566666664311346677776554 3457777776443
|
This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere. |
| >PRK13934 stationary phase survival protein SurE; Provisional | Back alignment and domain information |
|---|
Probab=88.80 E-value=5.7 Score=36.54 Aligned_cols=112 Identities=14% Similarity=0.074 Sum_probs=60.7
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCC-CCCCCCCccc
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPD-GLEPEDDRKD 96 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~ 96 (471)
||||+.-=-+. |---+.+|+++|.+.| +|+++.+...+.-.-.+. +....++...+.. +...-.-...
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~al~~~g-~V~VvAP~~eqSg~g~ai---------T~~~pl~~~~~~~~~~~~y~v~GT 69 (266)
T PRK13934 1 MKILVTNDDGV-HSPGLRLLYEFVSPLG-EVDVVAPETPKSATGLGI---------TLHKPLRMYEVDLCGFKVYATSGT 69 (266)
T ss_pred CeEEEEcCCCC-CCHHHHHHHHHHHhCC-cEEEEccCCCCccccccc---------cCCCCcEEEEeccCCcceEEeCCC
Confidence 36555432222 4455788999998887 799998877665443321 2223555555431 1100001112
Q ss_pred HHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEE----------C-CCcc---hHHHHHHHcCCceEEEeC
Q 012083 97 EAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIA----------D-VTFG---WALQVAAKLELKKASIYT 156 (471)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~----------D-~~~~---~~~~~A~~lgiP~v~~~~ 156 (471)
+.+ |-.+ -+..+ . .+||+||+ | ..++ +|+.-|..+|||.|.+|.
T Consensus 70 PaD-CV~l----------al~~l-~----~~pDLViSGIN~G~NlG~d~v~ySGTVgAA~Ea~~~GIPsIAvS~ 127 (266)
T PRK13934 70 PSD-TIYL----------ATYGL-G----RKYDLVLSGINLGDNTSLQVILSSGTLGAAFQAALLGIPAVAYSA 127 (266)
T ss_pred HHH-HHHH----------HHHhc-c----CCCCeEEecCccCCCCCcCcccccHhHHHHHHHHhcCCCEEEEec
Confidence 221 1111 11222 2 68999995 3 2223 456677889999999985
|
|
| >PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [] | Back alignment and domain information |
|---|
Probab=88.55 E-value=0.73 Score=39.49 Aligned_cols=42 Identities=14% Similarity=0.222 Sum_probs=26.0
Q ss_pred ccHHHHHHHHHHhcccCCCCeeEEEECCCcchHH-H--H-H-HHc-CCceEEEeC
Q 012083 108 MPGYLEELIQKINQQEEDEKITCVIADVTFGWAL-Q--V-A-AKL-ELKKASIYT 156 (471)
Q Consensus 108 ~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~-~--~-A-~~l-giP~v~~~~ 156 (471)
..+.+.+++++ .+||+||+...+.... . + . ..+ ++|++.+.+
T Consensus 77 ~~~~l~~~l~~-------~~PD~IIsThp~~~~~~l~~lk~~~~~~~~p~~tvvT 124 (169)
T PF06925_consen 77 FARRLIRLLRE-------FQPDLIISTHPFPAQVPLSRLKRRGRLPNIPVVTVVT 124 (169)
T ss_pred HHHHHHHHHhh-------cCCCEEEECCcchhhhHHHHHHHhhcccCCcEEEEEc
Confidence 33445555555 9999999998764333 1 1 1 224 588877655
|
; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process |
| >cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins | Back alignment and domain information |
|---|
Probab=88.36 E-value=2.2 Score=37.69 Aligned_cols=108 Identities=13% Similarity=0.137 Sum_probs=67.1
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCCccc
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDDRKD 96 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 96 (471)
+.||++.+.++-.|-....-++..|..+|++|++++..-..+.+.+.-. ..+..++.+...+
T Consensus 82 ~~~vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~~~p~~~l~~~~~----------~~~~d~v~lS~~~-------- 143 (201)
T cd02070 82 KGKVVIGTVEGDIHDIGKNLVATMLEANGFEVIDLGRDVPPEEFVEAVK----------EHKPDILGLSALM-------- 143 (201)
T ss_pred CCeEEEEecCCccchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHH----------HcCCCEEEEeccc--------
Confidence 4699999999999999999999999999999998876655444443311 1144444432211
Q ss_pred HHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEE
Q 012083 97 EAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKAS 153 (471)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~ 153 (471)
....+.++++++.+++.+...++.++|..... ....++++|.=.+.
T Consensus 144 ---------~~~~~~~~~~i~~lr~~~~~~~~~i~vGG~~~--~~~~~~~~GaD~~~ 189 (201)
T cd02070 144 ---------TTTMGGMKEVIEALKEAGLRDKVKVMVGGAPV--NQEFADEIGADGYA 189 (201)
T ss_pred ---------cccHHHHHHHHHHHHHCCCCcCCeEEEECCcC--CHHHHHHcCCcEEE
Confidence 11223355566666653310145566666543 34578888765544
|
A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases. |
| >PRK00346 surE 5'(3')-nucleotidase/polyphosphatase; Provisional | Back alignment and domain information |
|---|
Probab=87.88 E-value=6.8 Score=35.80 Aligned_cols=111 Identities=15% Similarity=0.166 Sum_probs=61.5
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCCcccH
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDDRKDE 97 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 97 (471)
||||+.-=-+. |.--+.+|+++|.+. |+|+++.+...+.-.-.+. +....+++..+.... ..-...+
T Consensus 1 M~ILlTNDDGi-~a~Gi~aL~~~l~~~-~~V~VvAP~~~qSg~g~ai---------t~~~pl~~~~~~~~~--~~v~GTP 67 (250)
T PRK00346 1 MRILLTNDDGI-HAPGIRALAEALREL-ADVTVVAPDRERSGASHSL---------TLTRPLRVEKVDNGF--YAVDGTP 67 (250)
T ss_pred CeEEEECCCCC-CChhHHHHHHHHHhC-CCEEEEeCCCCCcCCcccc---------cCCCCeEEEEecCCe--EEECCcH
Confidence 36655432211 334477899999988 7999999987765544331 223356666552110 0001111
Q ss_pred HHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECC----------Ccc---hHHHHHHHcCCceEEEeC
Q 012083 98 AKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADV----------TFG---WALQVAAKLELKKASIYT 156 (471)
Q Consensus 98 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~----------~~~---~~~~~A~~lgiP~v~~~~ 156 (471)
.+ ++.--+..+.. .+||+||+.. +++ +|+.-|...|||.|.+|.
T Consensus 68 aD-----------cV~~gl~~l~~----~~pDlVvSGIN~G~N~g~~v~ySGTVgAA~ea~~~GiPaiA~S~ 124 (250)
T PRK00346 68 TD-----------CVHLALNGLLD----PKPDLVVSGINHGANLGDDVLYSGTVAAAMEGALLGIPAIAVSL 124 (250)
T ss_pred HH-----------HHHHHHHhhcc----CCCCEEEeCCccCCCCCCCeeccHHHHHHHHHHhcCCCeEEEec
Confidence 11 11111222322 5899998643 222 456777889999999875
|
|
| >TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=87.78 E-value=1.9 Score=43.46 Aligned_cols=101 Identities=12% Similarity=0.124 Sum_probs=68.0
Q ss_pred eccchh---hhhccCcceeeee---ccCc-chhhHhhhcCCc----eeecccccchhhhHHHHHhhhcceeeecCCCCCC
Q 012083 350 KWAPQE---KVLAHPSVACYLT---HCGW-NSTMEGISMGVP----FLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGI 418 (471)
Q Consensus 350 ~~vpq~---~lL~~~~~~~~It---HgG~-~s~~eal~~GvP----~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~ 418 (471)
+.+++. .+++.+++ ++. +-|. .++.||+++|+| +|+--+.+- + +. ++-|+.+++
T Consensus 342 ~~~~~~el~aly~aaDv--~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~----~---~~-l~~gllVnP----- 406 (456)
T TIGR02400 342 RSYDREELMALYRAADV--GLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGA----A---QE-LNGALLVNP----- 406 (456)
T ss_pred CCCCHHHHHHHHHhCcE--EEECccccccCccHHHHHHhcCCCCceEEEeCCCCC----h---HH-hCCcEEECC-----
Confidence 556665 45766666 665 3464 478899999999 655543321 1 12 344677754
Q ss_pred cCHhHHHHHHHHHhCcH--HHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHh
Q 012083 419 IGRHEIKRKVDELLSND--VVRKNALKLKELAQKSVTKEGSSSKNLEYFIKQIT 470 (471)
Q Consensus 419 ~~~~~l~~~i~~ll~~~--~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~ 470 (471)
.+.++++++|.++|+++ +-+++.+++.+.+.+ -+...-.+.|++++.
T Consensus 407 ~d~~~lA~aI~~aL~~~~~er~~r~~~~~~~v~~-----~~~~~W~~~~l~~l~ 455 (456)
T TIGR02400 407 YDIDGMADAIARALTMPLEEREERHRAMMDKLRK-----NDVQRWREDFLSDLN 455 (456)
T ss_pred CCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhh-----CCHHHHHHHHHHHhh
Confidence 57899999999999864 566677777777654 366677778887764
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib |
| >cd01425 RPS2 Ribosomal protein S2 (RPS2), involved in formation of the translation initiation complex, where it might contact the messenger RNA and several components of the ribosome | Back alignment and domain information |
|---|
Probab=87.30 E-value=3.3 Score=36.28 Aligned_cols=117 Identities=17% Similarity=0.049 Sum_probs=59.2
Q ss_pred cHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCC--CcccHHHHHHHHHhh
Q 012083 30 HVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPED--DRKDEAKMTRSISKV 107 (471)
Q Consensus 30 H~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 107 (471)
++.-.+.+...+.++|-+|.|+++......+.+.-+... +-.++ ...+-.+- ........+..+...
T Consensus 41 ~L~~A~~~i~~i~~~~g~iLfV~t~~~~~~~v~~~a~~~---------~~~~i--~~rw~~G~LTN~~~~~~~~~~~~~~ 109 (193)
T cd01425 41 KLRLALNFIANIAAKGGKILFVGTKPQAQRAVKKFAERT---------GSFYV--NGRWLGGTLTNWKTIRKSIKRLKKL 109 (193)
T ss_pred HHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHc---------CCeee--cCeecCCcCCCHHHHHHHHHHHHHH
Confidence 344445555666778999999999865444433322111 22221 11111110 111111111111111
Q ss_pred ccHHHHHHHHHHhcccCCCCeeEEEECCCcc--hHHHHHHHcCCceEEEeCchH
Q 012083 108 MPGYLEELIQKINQQEEDEKITCVIADVTFG--WALQVAAKLELKKASIYTSAP 159 (471)
Q Consensus 108 ~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~--~~~~~A~~lgiP~v~~~~~~~ 159 (471)
-...++..+..++..- ..||+||+-...- .+..=|.++|||.|.+..+..
T Consensus 110 ~~~~~~k~~~g~~~~~--~~Pdlviv~~~~~~~~ai~Ea~~l~IP~I~i~Dtn~ 161 (193)
T cd01425 110 EKEKLEKNLGGIKDMF--RLPDLVIVLDPRKEHQAIREASKLGIPVIAIVDTNC 161 (193)
T ss_pred HHHHHHHhcccccccc--cCCCEEEEeCCccchHHHHHHHHcCCCEEEEecCCC
Confidence 1122333333333322 7899988655332 778899999999999986654
|
It has been shown that in Escherichia coli RPS2 is essential for the binding of ribosomal protein S1 to the 30s ribosomal subunit. In humans, most likely in all vertebrates, and perhaps in all metazoans, the protein also functions as the 67 kDa laminin receptor (LAMR1 or 67LR), which is formed from a 37 kDa precursor, and is overexpressed in many tumors. 67LR is a cell surface receptor which interacts with a variety of ligands, laminin-1 and others. It is assumed that the ligand interactions are mediated via the conserved C-terminus, which becomes extracellular as the protein undergoes conformational changes which are not well understood. Specifically, a conserved palindromic motif, LMWWML, may participate in the interactions. 67LR plays essential roles in the adhesion of cells to the basement membrane an |
| >PF02441 Flavoprotein: Flavoprotein; InterPro: IPR003382 This entry contains a diverse range of flavoprotein enzymes, including epidermin biosynthesis protein, EpiD, which has been shown to be a flavoprotein that binds FMN [] | Back alignment and domain information |
|---|
Probab=86.37 E-value=1.2 Score=36.14 Aligned_cols=45 Identities=16% Similarity=0.050 Sum_probs=37.8
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHh
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKES 63 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~ 63 (471)
|||++...|+.+=+. ...+.++|.++|++|.++.++.....+...
T Consensus 1 k~i~l~vtGs~~~~~-~~~~l~~L~~~g~~v~vv~S~~A~~~~~~~ 45 (129)
T PF02441_consen 1 KRILLGVTGSIAAYK-APDLLRRLKRAGWEVRVVLSPSAERFVTPE 45 (129)
T ss_dssp -EEEEEE-SSGGGGG-HHHHHHHHHTTTSEEEEEESHHHHHHSHHH
T ss_pred CEEEEEEECHHHHHH-HHHHHHHHhhCCCEEEEEECCcHHHHhhhh
Confidence 589888888877766 999999999999999999998888777765
|
This enzyme catalyzes the removal of two reducing equivalents from the cysteine residue of the C-terminal meso-lanthionine of epidermin to form a --C==C-- double bond. This family also includes the B chain of dipicolinate synthase a small polar molecule that accumulates to high concentrations in bacterial endospores, and is thought to play a role in spore heat resistance, or the maintenance of heat resistance []. Dipicolinate synthase catalyses the formation of dipicolinic acid from dihydroxydipicolinic acid. This family also includes phenylacrylic acid decarboxylase 4.1.1 from EC [].; GO: 0003824 catalytic activity; PDB: 3QJG_L 1G63_G 1G5Q_L 1P3Y_1 1QZU_A 1E20_A 1MVN_A 1MVL_A 3ZQU_A 2EJB_A .... |
| >COG4370 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=86.01 E-value=30 Score=32.34 Aligned_cols=99 Identities=14% Similarity=0.069 Sum_probs=58.2
Q ss_pred CCcEEE-eccchhhhhccCcceeeeeccCcchhhHhhhcCCceeecccccchhhh--HHHHHhhhcceeeecCCCCCCcC
Q 012083 344 DFGKMV-KWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYI--KSCICDDWKIGLWLEPDDNGIIG 420 (471)
Q Consensus 344 ~nv~~~-~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~n--a~~v~~~~G~G~~~~~~~~~~~~ 420 (471)
+|..+. .|-...++|.++++ .|--.|. .+-+++=.|||+|.+|-.+-|+.- |.|=.+-+|..+.+-. -.
T Consensus 294 dnc~l~lsqqsfadiLH~ada--algmAGT-AtEQavGLGkPvi~fPg~GPQy~pgFA~rQ~rLLG~sltlv~-----~~ 365 (412)
T COG4370 294 DNCSLWLSQQSFADILHAADA--ALGMAGT-ATEQAVGLGKPVIGFPGQGPQYNPGFAERQQRLLGASLTLVR-----PE 365 (412)
T ss_pred CceEEEEeHHHHHHHHHHHHH--HHHhccc-hHHHhhccCCceeecCCCCCCcChHHHHHHHHHhcceeeecC-----Cc
Confidence 344433 55555566655554 3333332 223457789999999999888654 4444443577777743 22
Q ss_pred HhHHHHHHHHHhCcHHHHHHHH-HHHHHHHH
Q 012083 421 RHEIKRKVDELLSNDVVRKNAL-KLKELAQK 450 (471)
Q Consensus 421 ~~~l~~~i~~ll~~~~~~~~a~-~l~~~~~~ 450 (471)
...-..+.+++|.|+++..+++ .=.+++.+
T Consensus 366 aq~a~~~~q~ll~dp~r~~air~nGqrRiGq 396 (412)
T COG4370 366 AQAAAQAVQELLGDPQRLTAIRHNGQRRIGQ 396 (412)
T ss_pred hhhHHHHHHHHhcChHHHHHHHhcchhhccC
Confidence 3333444455999999888887 33445544
|
|
| >cd00561 CobA_CobO_BtuR ATP:corrinoid adenosyltransferase BtuR/CobO/CobP | Back alignment and domain information |
|---|
Probab=86.00 E-value=15 Score=30.97 Aligned_cols=100 Identities=14% Similarity=0.104 Sum_probs=57.3
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEE---eCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCCcc
Q 012083 19 HVLLVSFPAQGHVASLMKLAHRLADCRIKVTFV---TTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDDRK 95 (471)
Q Consensus 19 ~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 95 (471)
-|.+.+.++.|-....+++|-+.+.+|++|.|+ -........... ...+++.+.....+..... .
T Consensus 4 ~i~vy~g~G~Gkt~~a~g~~~ra~~~g~~v~~vQFlKg~~~~gE~~~l----------~~l~~v~~~~~g~~~~~~~--~ 71 (159)
T cd00561 4 LIQVYTGNGKGKTTAALGLALRALGHGYRVGVVQFLKGGWKYGELKAL----------ERLPNIEIHRMGRGFFWTT--E 71 (159)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEEeCCCCccCHHHHH----------HhCCCcEEEECCCCCccCC--C
Confidence 367778889999999999999999999999984 332111111111 1123778877655432221 1
Q ss_pred cHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcc
Q 012083 96 DEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFG 138 (471)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~ 138 (471)
+..+.... ........++.+.. .++|+||.|-...
T Consensus 72 ~~~~~~~~-a~~~~~~a~~~~~~-------~~~dLlVLDEi~~ 106 (159)
T cd00561 72 NDEEDIAA-AAEGWAFAKEAIAS-------GEYDLVILDEINY 106 (159)
T ss_pred ChHHHHHH-HHHHHHHHHHHHhc-------CCCCEEEEechHh
Confidence 11111111 11222223333333 7999999998764
|
This family consists of the BtuR, CobO, CobP proteins all of which are Cob(I)alamin (vitamin B12) adenosyltransferase, which is involved in cobalamin (vitamin B12) biosynthesis. This enzyme is a homodimer, which catalyzes the adenosylation reaction: ATP + cob(I)alamin + H2O <= phosphate + diphosphate + adenosylcobalamin. |
| >TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 | Back alignment and domain information |
|---|
Probab=85.11 E-value=4 Score=41.89 Aligned_cols=80 Identities=15% Similarity=0.162 Sum_probs=55.3
Q ss_pred CCcEEEeccc--hh-hhhccCcceeeeecc---CcchhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeecCCCCC
Q 012083 344 DFGKMVKWAP--QE-KVLAHPSVACYLTHC---GWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNG 417 (471)
Q Consensus 344 ~nv~~~~~vp--q~-~lL~~~~~~~~ItHg---G~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~ 417 (471)
.++.+.++.. +. .++.+.++ +|.=+ |.++..||+.+|+|+| .......|.. ..=|..++
T Consensus 409 ~~v~f~gy~~e~dl~~~~~~arl--~id~s~~eg~~~~ieAiS~GiPqI-------nyg~~~~V~d-~~NG~li~----- 473 (519)
T TIGR03713 409 ERIAFTTLTNEEDLISALDKLRL--IIDLSKEPDLYTQISGISAGIPQI-------NKVETDYVEH-NKNGYIID----- 473 (519)
T ss_pred cEEEEEecCCHHHHHHHHhhheE--EEECCCCCChHHHHHHHHcCCCee-------ecCCceeeEc-CCCcEEeC-----
Confidence 5677778888 32 67755554 87665 6779999999999999 2222333444 34555553
Q ss_pred CcCHhHHHHHHHHHhCcHHHHHH
Q 012083 418 IIGRHEIKRKVDELLSNDVVRKN 440 (471)
Q Consensus 418 ~~~~~~l~~~i~~ll~~~~~~~~ 440 (471)
+.++|.+++..+|.+++--++
T Consensus 474 --d~~~l~~al~~~L~~~~~wn~ 494 (519)
T TIGR03713 474 --DISELLKALDYYLDNLKNWNY 494 (519)
T ss_pred --CHHHHHHHHHHHHhCHHHHHH
Confidence 668999999999999843333
|
This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >PF00551 Formyl_trans_N: Formyl transferase; InterPro: IPR002376 A number of formyl transferases belong to this group | Back alignment and domain information |
|---|
Probab=85.11 E-value=4 Score=35.38 Aligned_cols=106 Identities=8% Similarity=-0.027 Sum_probs=53.7
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCe--EEE-EeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCCc
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIK--VTF-VTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDDR 94 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~--Vt~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 94 (471)
|||+|+..++. ..+..+.++|.+++|+ +.. ++.++.......... .++....+...
T Consensus 1 mrI~~~~Sg~~---~~~~~~l~~l~~~~~~~~iv~Vit~~~~~~~~~~~~~-----------~~~~~~~~~~~------- 59 (181)
T PF00551_consen 1 MRIVFFGSGSG---SFLKALLEALKARGHNVEIVLVITNPDKPRGRSRAIK-----------NGIPAQVADEK------- 59 (181)
T ss_dssp EEEEEEESSSS---HHHHHHHHHHHTTSSEEEEEEEEESSTTTHHHHHHHH-----------TTHHEEEHHGG-------
T ss_pred CEEEEEEcCCC---HHHHHHHHHHHhCCCCceEEEEecccccccccccccc-----------CCCCEEecccc-------
Confidence 69999976655 4566778899999997 444 444433332221110 12222221100
Q ss_pred ccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcc-hHHHHHHHcCCceEEEeCc
Q 012083 95 KDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFG-WALQVAAKLELKKASIYTS 157 (471)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~-~~~~~A~~lgiP~v~~~~~ 157 (471)
. +.. .....+.+.+.+++ .+||++|+-.+.. -...+-+.....++-++++
T Consensus 60 -~----~~~-~~~~~~~~~~~l~~-------~~~Dl~v~~~~~~il~~~~l~~~~~~~iNiHps 110 (181)
T PF00551_consen 60 -N----FQP-RSENDEELLELLES-------LNPDLIVVAGYGRILPKEFLSIPPYGIINIHPS 110 (181)
T ss_dssp -G----SSS-HHHHHHHHHHHHHH-------TT-SEEEESS-SS---HHHHHHSTTSEEEEESS
T ss_pred -C----CCc-hHhhhhHHHHHHHh-------hccceeehhhhHHHhhhhhhhcccccEEEEeec
Confidence 0 000 01112223344444 8999998876543 4455557777777777664
|
Methionyl-tRNA formyltransferase transfers a formyl group onto the amino terminus of the acyl moiety of the methionyl aminoacyl-tRNA. The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and by impairing its binding to EFTU-GTP. Formyltetrahydrofolate dehydrogenase produces formate from formyl- tetrahydrofolate. This is the N-terminal domain of these enzymes and is found upstream of the C-terminal domain (IPR005793 from INTERPRO). The trifunctional glycinamide ribonucleotide synthetase-aminoimidazole ribonucleotide synthetase-glycinamide ribonucleotide transformylase catalyses the second, third and fifth steps in de novo purine biosynthesis. The glycinamide ribonucleotide transformylase belongs to this group.; GO: 0016742 hydroxymethyl-, formyl- and related transferase activity, 0009058 biosynthetic process; PDB: 3P9X_B 3OBI_A 3R8X_A 3KCQ_C 3RFO_D 3AV3_A 3N0V_D 3LOU_A 3O1L_A 4DS3_A .... |
| >PF02142 MGS: MGS-like domain This is a subfamily of this family; InterPro: IPR011607 This domain composes the whole protein of methylglyoxal synthetase and the domain is also found in carbamoyl phosphate synthetase (CPS) where it forms a regulatory domain that binds to the allosteric effector ornithine | Back alignment and domain information |
|---|
Probab=84.44 E-value=2.5 Score=32.14 Aligned_cols=83 Identities=18% Similarity=0.186 Sum_probs=48.8
Q ss_pred HHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCC-CcccHHHHHHHHHhhccHHH
Q 012083 34 LMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPED-DRKDEAKMTRSISKVMPGYL 112 (471)
Q Consensus 34 ~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 112 (471)
++.+|+.|.+.|+++ ++++.-...+.+. |+....+.......+ ..++.
T Consensus 2 ~~~~a~~l~~lG~~i--~AT~gTa~~L~~~--------------Gi~~~~v~~~~~~~~~~~g~~--------------- 50 (95)
T PF02142_consen 2 IVPLAKRLAELGFEI--YATEGTAKFLKEH--------------GIEVTEVVNKIGEGESPDGRV--------------- 50 (95)
T ss_dssp HHHHHHHHHHTTSEE--EEEHHHHHHHHHT--------------T--EEECCEEHSTG-GGTHCH---------------
T ss_pred HHHHHHHHHHCCCEE--EEChHHHHHHHHc--------------CCCceeeeeecccCccCCchh---------------
Confidence 578999999999664 5566677777777 777554432211110 01111
Q ss_pred HHHHHHHhcccCCCCeeEEEECCCcchH---------HHHHHHcCCceE
Q 012083 113 EELIQKINQQEEDEKITCVIADVTFGWA---------LQVAAKLELKKA 152 (471)
Q Consensus 113 ~~ll~~l~~~~~~~~pD~vV~D~~~~~~---------~~~A~~lgiP~v 152 (471)
++++.++. .+.|+||........ ..+|...+||++
T Consensus 51 -~i~~~i~~----~~IdlVIn~~~~~~~~~~~dg~~irr~a~~~~Ip~~ 94 (95)
T PF02142_consen 51 -QIMDLIKN----GKIDLVINTPYPFSDQEHTDGYKIRRAAVEYNIPLF 94 (95)
T ss_dssp -HHHHHHHT----TSEEEEEEE--THHHHHTHHHHHHHHHHHHTTSHEE
T ss_pred -HHHHHHHc----CCeEEEEEeCCCCcccccCCcHHHHHHHHHcCCCCc
Confidence 33344444 899999977644311 467889999986
|
The known structures in this domain show a common phosphate binding site []. ; PDB: 4A1O_A 3ZZM_A 1ZCZ_A 1M6V_C 1CS0_C 1C30_E 1C3O_G 1BXR_A 1T36_E 1A9X_A .... |
| >PRK05986 cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase; Validated | Back alignment and domain information |
|---|
Probab=84.43 E-value=16 Score=31.81 Aligned_cols=102 Identities=13% Similarity=0.012 Sum_probs=61.4
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcch---hhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCC
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFIC---ERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDD 93 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 93 (471)
+-.|.+++..+.|=....+++|-+.+.+|++|.++-.-... ...... ...+++.+.....+.....
T Consensus 22 ~g~v~v~~g~GkGKtt~a~g~a~ra~g~G~~V~ivQFlKg~~~~GE~~~l----------~~l~~v~~~~~g~~~~~~~- 90 (191)
T PRK05986 22 KGLLIVHTGNGKGKSTAAFGMALRAVGHGKKVGVVQFIKGAWSTGERNLL----------EFGGGVEFHVMGTGFTWET- 90 (191)
T ss_pred CCeEEEECCCCCChHHHHHHHHHHHHHCCCeEEEEEEecCCCccCHHHHH----------hcCCCcEEEECCCCCcccC-
Confidence 45789999999999999999999999999999987432211 111111 1123788887765432221
Q ss_pred cccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcc
Q 012083 94 RKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFG 138 (471)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~ 138 (471)
.+..+-.. .........++.+.. .++|+||.|-...
T Consensus 91 -~~~~e~~~-~~~~~~~~a~~~l~~-------~~ydlvVLDEi~~ 126 (191)
T PRK05986 91 -QDRERDIA-AAREGWEEAKRMLAD-------ESYDLVVLDELTY 126 (191)
T ss_pred -CCcHHHHH-HHHHHHHHHHHHHhC-------CCCCEEEEehhhH
Confidence 11111111 112222233333333 8999999998764
|
|
| >COG1703 ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=84.35 E-value=3.4 Score=38.40 Aligned_cols=120 Identities=11% Similarity=0.086 Sum_probs=69.7
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCC---CC-CCC
Q 012083 16 TNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPD---GL-EPE 91 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~-~~~ 91 (471)
+.-.|.+...|+-|--.-.-+|.+.|.++||+|-++..++....--.+ ...+.++...+.. .+ .+.
T Consensus 50 ~a~viGITG~PGaGKSTli~~L~~~l~~~G~rVaVlAVDPSSp~TGGs----------iLGDRiRM~~~~~~~~vFiRs~ 119 (323)
T COG1703 50 NAHVIGITGVPGAGKSTLIEALGRELRERGHRVAVLAVDPSSPFTGGS----------ILGDRIRMQRLAVDPGVFIRSS 119 (323)
T ss_pred CCcEEEecCCCCCchHHHHHHHHHHHHHCCcEEEEEEECCCCCCCCcc----------ccccHhhHHhhccCCCeEEeec
Confidence 345789999999999999999999999999999998776654432211 1112233322210 00 001
Q ss_pred CCcccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcc--hHHHHHHHcCCceEEEeCc
Q 012083 92 DDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFG--WALQVAAKLELKKASIYTS 157 (471)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~--~~~~~A~~lgiP~v~~~~~ 157 (471)
.....+.. .....++.+..+.. ..+|+||++.... .=..+++...+-.+.+.+.
T Consensus 120 ~srG~lGG--------lS~at~~~i~~ldA----aG~DvIIVETVGvGQsev~I~~~aDt~~~v~~pg 175 (323)
T COG1703 120 PSRGTLGG--------LSRATREAIKLLDA----AGYDVIIVETVGVGQSEVDIANMADTFLVVMIPG 175 (323)
T ss_pred CCCccchh--------hhHHHHHHHHHHHh----cCCCEEEEEecCCCcchhHHhhhcceEEEEecCC
Confidence 11111111 11122233333333 8999999997765 2356777777666665443
|
|
| >COG0003 ArsA Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
Probab=83.82 E-value=12 Score=35.63 Aligned_cols=43 Identities=19% Similarity=0.141 Sum_probs=34.2
Q ss_pred cEEEEEcC-CCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhh
Q 012083 18 VHVLLVSF-PAQGHVASLMKLAHRLADCRIKVTFVTTEFICERI 60 (471)
Q Consensus 18 ~~Il~~~~-~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~ 60 (471)
+||+|++. |+-|=..-..++|-.|++.|.+|.+++++.....-
T Consensus 2 ~riv~f~GKGGVGKTT~aaA~A~~lA~~g~kvLlvStDPAhsL~ 45 (322)
T COG0003 2 TRIVFFTGKGGVGKTTIAAATAVKLAESGKKVLLVSTDPAHSLG 45 (322)
T ss_pred cEEEEEecCCcccHHHHHHHHHHHHHHcCCcEEEEEeCCCCchH
Confidence 57777764 56799889999999999999998888887665543
|
|
| >PRK13931 stationary phase survival protein SurE; Provisional | Back alignment and domain information |
|---|
Probab=83.79 E-value=6.9 Score=36.02 Aligned_cols=100 Identities=14% Similarity=0.049 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHhC---CCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCCcccHHHHHHHHHhhc
Q 012083 32 ASLMKLAHRLADC---RIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDDRKDEAKMTRSISKVM 108 (471)
Q Consensus 32 ~p~~~La~~L~~r---Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (471)
--+.+|+++|.+. |++|+++.+...+.-.-.+. +....++...+.++. -.-...+.+ |-.+.
T Consensus 14 ~Gl~aL~~~l~~~~~~~~~V~VVAP~~eqSg~ghai---------T~~~pl~~~~~~~~~--yav~GTPaD-CV~la--- 78 (261)
T PRK13931 14 PGLEVLEQIATELAGPDGEVWTVAPAFEQSGVGHCI---------SYTHPMMIAELGPRR--FAAEGSPAD-CVLAA--- 78 (261)
T ss_pred HhHHHHHHHHHHhccCCCeEEEEeCCCCCCCCcccc---------cCCCCeEEEEeCCCe--EEEcCchHH-HHHHH---
Confidence 3466777777663 47999999887765544332 223466776654211 000112221 11111
Q ss_pred cHHHHHHHHHHhcccCCCCeeEEEEC----------CCcc---hHHHHHHHcCCceEEEeC
Q 012083 109 PGYLEELIQKINQQEEDEKITCVIAD----------VTFG---WALQVAAKLELKKASIYT 156 (471)
Q Consensus 109 ~~~~~~ll~~l~~~~~~~~pD~vV~D----------~~~~---~~~~~A~~lgiP~v~~~~ 156 (471)
+..++.. .+||+||+. .+++ +|+.-|..+|||.|.+|.
T Consensus 79 ---l~~~~~~-------~~pDlVvSGIN~G~N~g~~v~ySGTVgAA~Ea~~~GiPsiA~S~ 129 (261)
T PRK13931 79 ---LYDVMKD-------APPDLVLSGVNRGNNSAENVLYSGTVGGAMEAALQGLPAIALSQ 129 (261)
T ss_pred ---HHHhcCC-------CCCCEEEECCccCCCCCcCcccchhHHHHHHHHhcCCCeEEEEe
Confidence 2222221 479999963 3333 456777899999999985
|
|
| >cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain | Back alignment and domain information |
|---|
Probab=83.73 E-value=11 Score=30.12 Aligned_cols=43 Identities=21% Similarity=0.235 Sum_probs=37.0
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhH
Q 012083 19 HVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIK 61 (471)
Q Consensus 19 ~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~ 61 (471)
||++.+.++-.|..-..-++.-|...|++|.+.......+.+.
T Consensus 1 ~vv~~~~~gd~H~lG~~~~~~~l~~~G~~vi~lG~~vp~e~~~ 43 (122)
T cd02071 1 RILVAKPGLDGHDRGAKVIARALRDAGFEVIYTGLRQTPEEIV 43 (122)
T ss_pred CEEEEecCCChhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHH
Confidence 6889999999999999999999999999999998865544443
|
This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation. |
| >COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=83.65 E-value=38 Score=31.57 Aligned_cols=88 Identities=20% Similarity=0.320 Sum_probs=56.4
Q ss_pred CCcEEEeccch---hhhhccCcceeeeec---cCcc-hhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeecCCCC
Q 012083 344 DFGKMVKWAPQ---EKVLAHPSVACYLTH---CGWN-STMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDN 416 (471)
Q Consensus 344 ~nv~~~~~vpq---~~lL~~~~~~~~ItH---gG~~-s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~ 416 (471)
+++.+.+++|+ ..+++.+++ ++.. .|.| ++.||+++|+|++.... ......+.. .+.|....
T Consensus 257 ~~v~~~g~~~~~~~~~~~~~~~~--~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~----~~~~e~~~~-~~~g~~~~---- 325 (381)
T COG0438 257 DNVKFLGYVPDEELAELLASADV--FVLPSLSEGFGLVLLEAMAAGTPVIASDV----GGIPEVVED-GETGLLVP---- 325 (381)
T ss_pred CcEEEecccCHHHHHHHHHhCCE--EEeccccccchHHHHHHHhcCCcEEECCC----CChHHHhcC-CCceEecC----
Confidence 67777899882 245655555 5555 3554 45999999999976643 323333333 23466332
Q ss_pred CCcCHhHHHHHHHHHhCcHHHHHHHHH
Q 012083 417 GIIGRHEIKRKVDELLSNDVVRKNALK 443 (471)
Q Consensus 417 ~~~~~~~l~~~i~~ll~~~~~~~~a~~ 443 (471)
. ...+++.+++..++++.+.+++..+
T Consensus 326 ~-~~~~~~~~~i~~~~~~~~~~~~~~~ 351 (381)
T COG0438 326 P-GDVEELADALEQLLEDPELREELGE 351 (381)
T ss_pred C-CCHHHHHHHHHHHhcCHHHHHHHHH
Confidence 1 2679999999999999854555444
|
|
| >COG0052 RpsB Ribosomal protein S2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=83.49 E-value=7.8 Score=34.87 Aligned_cols=35 Identities=14% Similarity=0.079 Sum_probs=25.9
Q ss_pred CCeeEEEE-CCCcc-hHHHHHHHcCCceEEEeCchHH
Q 012083 126 EKITCVIA-DVTFG-WALQVAAKLELKKASIYTSAPG 160 (471)
Q Consensus 126 ~~pD~vV~-D~~~~-~~~~~A~~lgiP~v~~~~~~~~ 160 (471)
.-||++++ |...- -|..=|.++|||+|.+.-+...
T Consensus 155 ~~Pd~l~ViDp~~e~iAv~EA~klgIPVvAlvDTn~d 191 (252)
T COG0052 155 GLPDVLFVIDPRKEKIAVKEANKLGIPVVALVDTNCD 191 (252)
T ss_pred CCCCEEEEeCCcHhHHHHHHHHHcCCCEEEEecCCCC
Confidence 34998764 54433 7788899999999998766544
|
|
| >PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt | Back alignment and domain information |
|---|
Probab=83.16 E-value=7.4 Score=35.65 Aligned_cols=93 Identities=19% Similarity=0.243 Sum_probs=56.2
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCCcccH
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDDRKDE 97 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 97 (471)
|||+++...+-|+ .|++.|.++|+ |.+-+.-++........ ..+..... +...
T Consensus 1 m~ILvlgGTtE~r-----~la~~L~~~g~-v~~sv~t~~g~~~~~~~-----------~~~~~v~~--------G~lg-- 53 (249)
T PF02571_consen 1 MKILVLGGTTEGR-----KLAERLAEAGY-VIVSVATSYGGELLKPE-----------LPGLEVRV--------GRLG-- 53 (249)
T ss_pred CEEEEEechHHHH-----HHHHHHHhcCC-EEEEEEhhhhHhhhccc-----------cCCceEEE--------CCCC--
Confidence 5888887666554 68999999999 66554444544443210 01112211 0000
Q ss_pred HHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchH-------HHHHHHcCCceEEEe
Q 012083 98 AKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWA-------LQVAAKLELKKASIY 155 (471)
Q Consensus 98 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~-------~~~A~~lgiP~v~~~ 155 (471)
..+.+.+++++ .++|+|| |..-++| ..+|+.+|||++.+-
T Consensus 54 ----------~~~~l~~~l~~-------~~i~~vI-DATHPfA~~is~na~~a~~~~~ipylR~e 100 (249)
T PF02571_consen 54 ----------DEEGLAEFLRE-------NGIDAVI-DATHPFAAEISQNAIEACRELGIPYLRFE 100 (249)
T ss_pred ----------CHHHHHHHHHh-------CCCcEEE-ECCCchHHHHHHHHHHHHhhcCcceEEEE
Confidence 12234555666 8999988 6554443 578899999999974
|
Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process |
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=83.14 E-value=5.9 Score=43.05 Aligned_cols=96 Identities=17% Similarity=0.132 Sum_probs=62.1
Q ss_pred hhhccCcceeeeec---cCcc-hhhHhhhcCCc---eeecccccchhhhHHHHHhhhc-ceeeecCCCCCCcCHhHHHHH
Q 012083 356 KVLAHPSVACYLTH---CGWN-STMEGISMGVP---FLCWPWGHDHLYIKSCICDDWK-IGLWLEPDDNGIIGRHEIKRK 427 (471)
Q Consensus 356 ~lL~~~~~~~~ItH---gG~~-s~~eal~~GvP---~l~~P~~~DQ~~na~~v~~~~G-~G~~~~~~~~~~~~~~~l~~~ 427 (471)
.+++.+++ |+.- -|+| +..|++++|+| +++++-+. ..+. . +| -|+.+++ .+.++++++
T Consensus 371 aly~~ADv--fvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~---G~~~---~-l~~~allVnP-----~D~~~lA~A 436 (797)
T PLN03063 371 ALYAITDV--MLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFA---GAGQ---S-LGAGALLVNP-----WNITEVSSA 436 (797)
T ss_pred HHHHhCCE--EEeCccccccCcchhhHheeecCCCCCEEeeCCc---Cchh---h-hcCCeEEECC-----CCHHHHHHH
Confidence 67766777 6644 4766 66799999999 44554221 1222 2 33 4777754 588999999
Q ss_pred HHHHhC-cH-HHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHh
Q 012083 428 VDELLS-ND-VVRKNALKLKELAQKSVTKEGSSSKNLEYFIKQIT 470 (471)
Q Consensus 428 i~~ll~-~~-~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~ 470 (471)
|.++|+ ++ +-+++.+++.+.+++. +...-.+.|++++.
T Consensus 437 I~~aL~m~~~er~~r~~~~~~~v~~~-----~~~~Wa~~fl~~l~ 476 (797)
T PLN03063 437 IKEALNMSDEERETRHRHNFQYVKTH-----SAQKWADDFMSELN 476 (797)
T ss_pred HHHHHhCCHHHHHHHHHHHHHhhhhC-----CHHHHHHHHHHHHH
Confidence 999998 44 4555566666666543 45555667766653
|
|
| >PRK08305 spoVFB dipicolinate synthase subunit B; Reviewed | Back alignment and domain information |
|---|
Probab=83.05 E-value=2.3 Score=37.16 Aligned_cols=45 Identities=11% Similarity=-0.010 Sum_probs=35.9
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhh
Q 012083 16 TNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERI 60 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~ 60 (471)
+.+||++-..|+.|=+.-...+++.|.++||+|.++.++.....+
T Consensus 4 ~~k~IllgVTGsiaa~k~a~~lir~L~k~G~~V~vv~T~aA~~~~ 48 (196)
T PRK08305 4 KGKRIGFGLTGSHCTYDEVMPEIEKLVDEGAEVTPIVSYTVQTTD 48 (196)
T ss_pred CCCEEEEEEcCHHHHHHHHHHHHHHHHhCcCEEEEEECHhHHHHh
Confidence 457888888776666655789999999999999999987765443
|
|
| >PRK08057 cobalt-precorrin-6x reductase; Reviewed | Back alignment and domain information |
|---|
Probab=82.98 E-value=5.9 Score=36.24 Aligned_cols=90 Identities=17% Similarity=0.130 Sum_probs=56.0
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCCcccH
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDDRKDE 97 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 97 (471)
++|+++...+-|+ .||+.|.++|+.|++-+...+.. .... +..... +...
T Consensus 3 ~~IlvlgGT~egr-----~la~~L~~~g~~v~~Svat~~g~-~~~~--------------~~~v~~--------G~l~-- 52 (248)
T PRK08057 3 PRILLLGGTSEAR-----ALARALAAAGVDIVLSLAGRTGG-PADL--------------PGPVRV--------GGFG-- 52 (248)
T ss_pred ceEEEEechHHHH-----HHHHHHHhCCCeEEEEEccCCCC-cccC--------------CceEEE--------CCCC--
Confidence 7888887666654 68899999999888765544443 1111 222211 0000
Q ss_pred HHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchH-------HHHHHHcCCceEEEe
Q 012083 98 AKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWA-------LQVAAKLELKKASIY 155 (471)
Q Consensus 98 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~-------~~~A~~lgiP~v~~~ 155 (471)
..+.+.+++++ .+.++|| |..-++| ..+|+.+|||++.+.
T Consensus 53 ----------~~~~l~~~l~~-------~~i~~VI-DATHPfA~~is~~a~~ac~~~~ipyiR~e 99 (248)
T PRK08057 53 ----------GAEGLAAYLRE-------EGIDLVI-DATHPYAAQISANAAAACRALGIPYLRLE 99 (248)
T ss_pred ----------CHHHHHHHHHH-------CCCCEEE-ECCCccHHHHHHHHHHHHHHhCCcEEEEe
Confidence 12234555666 8999987 6554433 478899999999974
|
|
| >PF02374 ArsA_ATPase: Anion-transporting ATPase; PDB: 2WOO_A 3IBG_B 3SJA_A 3H84_B 3SJD_A 3ZS9_A 3A37_A 2WOJ_A 3SJC_B 3A36_B | Back alignment and domain information |
|---|
Probab=82.68 E-value=23 Score=33.56 Aligned_cols=44 Identities=18% Similarity=0.149 Sum_probs=34.4
Q ss_pred cEEEEEc-CCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhH
Q 012083 18 VHVLLVS-FPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIK 61 (471)
Q Consensus 18 ~~Il~~~-~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~ 61 (471)
||++|+. -|+-|=..-..++|-.++++|++|.+++++.....-.
T Consensus 1 ~r~~~~~GKGGVGKTT~aaA~A~~~A~~G~rtLlvS~Dpa~~L~d 45 (305)
T PF02374_consen 1 MRILFFGGKGGVGKTTVAAALALALARRGKRTLLVSTDPAHSLSD 45 (305)
T ss_dssp -SEEEEEESTTSSHHHHHHHHHHHHHHTTS-EEEEESSTTTHHHH
T ss_pred CeEEEEecCCCCCcHHHHHHHHHHHhhCCCCeeEeecCCCccHHH
Confidence 3665555 5677999999999999999999999999988765433
|
... |
| >cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Probab=82.20 E-value=6.2 Score=39.92 Aligned_cols=101 Identities=15% Similarity=0.169 Sum_probs=60.2
Q ss_pred Eeccchh---hhhccCcceeeee---ccCc-chhhHhhhcCCc----eeecccccchhhhHHHHHhhhcceeeecCCCCC
Q 012083 349 VKWAPQE---KVLAHPSVACYLT---HCGW-NSTMEGISMGVP----FLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNG 417 (471)
Q Consensus 349 ~~~vpq~---~lL~~~~~~~~It---HgG~-~s~~eal~~GvP----~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~ 417 (471)
.+++++. .+++.+++ ||. +-|. .++.||+++|+| +|+--..+ - .+. ..-|..+++
T Consensus 346 ~g~v~~~el~~~y~~aDv--~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G-~------~~~-~~~g~lv~p---- 411 (460)
T cd03788 346 YRSLPREELAALYRAADV--ALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAG-A------AEE-LSGALLVNP---- 411 (460)
T ss_pred eCCCCHHHHHHHHHhccE--EEeCccccccCcccceeEEEecCCCceEEEecccc-c------hhh-cCCCEEECC----
Confidence 3677765 46766776 663 3454 477999999999 44332221 0 011 133666644
Q ss_pred CcCHhHHHHHHHHHhCcH--HHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHH
Q 012083 418 IIGRHEIKRKVDELLSND--VVRKNALKLKELAQKSVTKEGSSSKNLEYFIKQI 469 (471)
Q Consensus 418 ~~~~~~l~~~i~~ll~~~--~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~ 469 (471)
-+.++++++|.++|+++ +.+++.++..+.+.+ -+...-.+.+++++
T Consensus 412 -~d~~~la~ai~~~l~~~~~e~~~~~~~~~~~v~~-----~~~~~w~~~~l~~l 459 (460)
T cd03788 412 -YDIDEVADAIHRALTMPLEERRERHRKLREYVRT-----HDVQAWANSFLDDL 459 (460)
T ss_pred -CCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh-----CCHHHHHHHHHHhh
Confidence 47799999999999875 333333333444332 35556666777665
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. |
| >COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=82.10 E-value=5.7 Score=32.57 Aligned_cols=48 Identities=21% Similarity=0.155 Sum_probs=40.4
Q ss_pred CCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHH
Q 012083 15 KTNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKE 62 (471)
Q Consensus 15 ~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~ 62 (471)
+++.||++.+.+.-||-.-.--++++|+..|.+|...+.-...+.+..
T Consensus 10 g~rprvlvak~GlDgHd~gakvia~~l~d~GfeVi~~g~~~tp~e~v~ 57 (143)
T COG2185 10 GARPRVLVAKLGLDGHDRGAKVIARALADAGFEVINLGLFQTPEEAVR 57 (143)
T ss_pred CCCceEEEeccCccccccchHHHHHHHHhCCceEEecCCcCCHHHHHH
Confidence 367999999999999999999999999999999998766555444433
|
|
| >smart00851 MGS MGS-like domain | Back alignment and domain information |
|---|
Probab=81.84 E-value=16 Score=27.32 Aligned_cols=79 Identities=19% Similarity=0.213 Sum_probs=46.7
Q ss_pred HHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCCcccHHHHHHHHHhhccHHHH
Q 012083 34 LMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDDRKDEAKMTRSISKVMPGYLE 113 (471)
Q Consensus 34 ~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (471)
++.+++.|.+.|++| ++|. .....+++. |+....+.... .+.. +
T Consensus 2 ~~~~~~~l~~lG~~i-~AT~-gTa~~L~~~--------------Gi~~~~~~~ki--~~~~---------------~--- 45 (90)
T smart00851 2 LVELAKRLAELGFEL-VATG-GTAKFLREA--------------GLPVKTLHPKV--HGGI---------------L--- 45 (90)
T ss_pred HHHHHHHHHHCCCEE-EEcc-HHHHHHHHC--------------CCcceeccCCC--CCCC---------------H---
Confidence 468899999999998 3444 455666665 65542111000 0000 1
Q ss_pred HHHHHHhcccCCCCeeEEEECCCc---------chHHHHHHHcCCceE
Q 012083 114 ELIQKINQQEEDEKITCVIADVTF---------GWALQVAAKLELKKA 152 (471)
Q Consensus 114 ~ll~~l~~~~~~~~pD~vV~D~~~---------~~~~~~A~~lgiP~v 152 (471)
.+++.++. .++|+||..... ..-...|...+||++
T Consensus 46 ~i~~~i~~----g~id~VIn~~~~~~~~~~~d~~~iRr~A~~~~Ip~~ 89 (90)
T smart00851 46 AILDLIKN----GEIDLVINTLYPLGAQPHEDGKALRRAAENIDIPGA 89 (90)
T ss_pred HHHHHhcC----CCeEEEEECCCcCcceeccCcHHHHHHHHHcCCCee
Confidence 13344444 899999985431 123467889999986
|
This domain composes the whole protein of methylglyoxal synthetase and the domain is also found in Carbamoyl phosphate synthetase (CPS) where it forms a regulatory domain that binds to the allosteric effector ornithine. This family also includes inosicase. The known structures in this family show a common phosphate binding site PUBMED:10526357. |
| >PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional | Back alignment and domain information |
|---|
Probab=81.77 E-value=3.4 Score=41.53 Aligned_cols=41 Identities=17% Similarity=0.255 Sum_probs=35.2
Q ss_pred CCcEEEEEcCCCcccHHHH------------HHHHHHHHhCCCeEEEEeCCcc
Q 012083 16 TNVHVLLVSFPAQGHVASL------------MKLAHRLADCRIKVTFVTTEFI 56 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~------------~~La~~L~~rGh~Vt~~~~~~~ 56 (471)
+.+||++...|+.-.+.|. .+||+++..+|++||+++.+..
T Consensus 255 ~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~ 307 (475)
T PRK13982 255 AGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD 307 (475)
T ss_pred CCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC
Confidence 5679999999998888775 4899999999999999997653
|
|
| >PRK05973 replicative DNA helicase; Provisional | Back alignment and domain information |
|---|
Probab=80.98 E-value=13 Score=33.79 Aligned_cols=45 Identities=22% Similarity=0.255 Sum_probs=37.5
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHH
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKE 62 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~ 62 (471)
-=+++...|+.|=..-++.++...+++|+.|.|++.+...+.+.+
T Consensus 65 sl~LIaG~PG~GKT~lalqfa~~~a~~Ge~vlyfSlEes~~~i~~ 109 (237)
T PRK05973 65 DLVLLGARPGHGKTLLGLELAVEAMKSGRTGVFFTLEYTEQDVRD 109 (237)
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHHhcCCeEEEEEEeCCHHHHHH
Confidence 346778888999999999999999889999999998877655544
|
|
| >KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=80.31 E-value=57 Score=31.37 Aligned_cols=84 Identities=15% Similarity=0.156 Sum_probs=51.2
Q ss_pred cCCHHHHHHHH-HHHHh-CCCCEEEEEcCCCCCCCCCCCCchhHHh--hCCCcEEEeccchh---hhhccCcceeeeecc
Q 012083 298 KLSQQQFNELA-LGLEL-AGQPFLCGVRPGFINGSSTNNPDGLVAK--VADFGKMVKWAPQE---KVLAHPSVACYLTHC 370 (471)
Q Consensus 298 ~~~~~~~~~~~-~al~~-~~~~~i~~~~~~~~~~~~~~lp~~~~~~--~~~nv~~~~~vpq~---~lL~~~~~~~~ItHg 370 (471)
....+.+..++ +.+.+ ...+|++.-.++ +...+. ...|+ +.++|.+.+-+|++ ++|...++ |++-.
T Consensus 207 rKGiDll~~iIp~vc~~~p~vrfii~GDGP----k~i~le-e~lEk~~l~~rV~~lG~v~h~~Vr~vl~~G~I--FlntS 279 (426)
T KOG1111|consen 207 RKGIDLLLEIIPSVCDKHPEVRFIIIGDGP----KRIDLE-EMLEKLFLQDRVVMLGTVPHDRVRDVLVRGDI--FLNTS 279 (426)
T ss_pred ccchHHHHHHHHHHHhcCCCeeEEEecCCc----ccchHH-HHHHHhhccCceEEecccchHHHHHHHhcCcE--EeccH
Confidence 34455666644 44553 345777655443 111121 22222 47888999999986 56766666 66543
Q ss_pred C----cchhhHhhhcCCceeec
Q 012083 371 G----WNSTMEGISMGVPFLCW 388 (471)
Q Consensus 371 G----~~s~~eal~~GvP~l~~ 388 (471)
= .-++.||..||.|++..
T Consensus 280 lTEafc~~ivEAaScGL~VVsT 301 (426)
T KOG1111|consen 280 LTEAFCMVIVEAASCGLPVVST 301 (426)
T ss_pred HHHHHHHHHHHHHhCCCEEEEe
Confidence 2 34678999999999875
|
|
| >PRK12311 rpsB 30S ribosomal protein S2/unknown domain fusion protein; Provisional | Back alignment and domain information |
|---|
Probab=80.08 E-value=6.1 Score=37.56 Aligned_cols=35 Identities=20% Similarity=0.049 Sum_probs=26.5
Q ss_pred CCeeEEEECCCcc--hHHHHHHHcCCceEEEeCchHH
Q 012083 126 EKITCVIADVTFG--WALQVAAKLELKKASIYTSAPG 160 (471)
Q Consensus 126 ~~pD~vV~D~~~~--~~~~~A~~lgiP~v~~~~~~~~ 160 (471)
..||+||+-...- .+..=|.++|||+|.+.-+...
T Consensus 151 ~~Pd~viv~d~~~e~~AI~EA~kl~IPvIaivDTn~d 187 (326)
T PRK12311 151 GLPDLLFVIDTNKEDIAIQEAQRLGIPVAAIVDTNCD 187 (326)
T ss_pred cCCCEEEEeCCccchHHHHHHHHcCCCEEEEeeCCCC
Confidence 4799877544322 7888999999999999766543
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 471 | ||||
| 2pq6_A | 482 | Crystal Structure Of Medicago Truncatula Ugt85h2- I | 9e-61 | ||
| 2vce_A | 480 | Characterization And Engineering Of The Bifunctiona | 5e-41 | ||
| 2c1x_A | 456 | Structure And Activity Of A Flavonoid 3-O Glucosylt | 7e-31 | ||
| 2acv_A | 463 | Crystal Structure Of Medicago Truncatula Ugt71g1 Le | 5e-27 | ||
| 2acw_A | 465 | Crystal Structure Of Medicago Truncatula Ugt71g1 Co | 5e-27 | ||
| 3hbf_A | 454 | Structure Of Ugt78g1 Complexed With Myricetin And U | 2e-26 | ||
| 2o6l_A | 170 | Crystal Structure Of The Udp-Glucuronic Acid Bindin | 3e-05 |
| >pdb|2PQ6|A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights Into The Structural Basis Of A Multifunctional (Iso) Flavonoid Glycosyltransferase Length = 482 | Back alignment and structure |
|
| >pdb|2VCE|A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants Length = 480 | Back alignment and structure |
|
| >pdb|2C1X|A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification Length = 456 | Back alignment and structure |
|
| >pdb|2ACV|A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Length = 463 | Back alignment and structure |
|
| >pdb|2ACW|A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose Length = 465 | Back alignment and structure |
|
| >pdb|3HBF|A Chain A, Structure Of Ugt78g1 Complexed With Myricetin And Udp Length = 454 | Back alignment and structure |
|
| >pdb|2O6L|A Chain A, Crystal Structure Of The Udp-Glucuronic Acid Binding Domain Of The Human Drug Metabolizing Udp-Glucuronosyltransferase 2b7 Length = 170 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10 Length = 482 | Back alignment and structure |
|---|
Score = 466 bits (1200), Expect = e-162
Identities = 141/484 (29%), Positives = 232/484 (47%), Gaps = 33/484 (6%)
Query: 11 ESLNKTNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFS 70
+ HV+++ +P QGH+ L KLA L +TFV TE+ +R+ +SR +F
Sbjct: 2 GNFANRKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFD 61
Query: 71 EMGDAQQLVRIVPLPDGLEPEDDRKDEA----KMTRSISKVMPGYLEELIQKINQQEEDE 126
D +PDGL P + D + + +S+ K EL+ ++N
Sbjct: 62 GFTD----FNFESIPDGLTPMEGDGDVSQDVPTLCQSVRKNFLKPYCELLTRLNHSTNVP 117
Query: 127 KITCVIADVTFGWALQVAAKLELKKASIYTSAPGILAMIMNIPKFIEAGIISS-DGIVIK 185
+TC+++D + +Q A + EL ++S+ L +M+ F+E GII D +
Sbjct: 118 PVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVERGIIPFKDESYLT 177
Query: 186 NEKIELS-PYLPAASPAEF--LWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHEL 242
N +E ++P + + + +M ++ + + IL F+EL
Sbjct: 178 NGCLETKVDWIPGLKNFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNEL 237
Query: 243 APSA----NKILPSIIPVGPLI----------ANGQPTGNFWSEDLTCLSWLDKQPPGSV 288
+ +PSI P+GPL N W ED CL WL+ + PGSV
Sbjct: 238 ESDVINALSSTIPSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSV 297
Query: 289 IYAAFGSISKLSQQQFNELALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKM 348
+Y FGS + ++ +Q E A GL + FL +RP + G S ++AD G +
Sbjct: 298 VYVNFGSTTVMTPEQLLEFAWGLANCKKSFLWIIRPDLVIGGSVIFSSEFTNEIADRGLI 357
Query: 349 VKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIG 408
W PQ+KVL HPS+ +LTHCGWNST E I GVP LCWP+ D IC++W+IG
Sbjct: 358 ASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIG 417
Query: 409 LWLEPDDNGIIGRHEIKRKVDELLSND---VVRKNALKLKELAQKSVTKEGSSSKNLEYF 465
+ ++ + R E+ + ++E+++ D +++ A++LK+ A+++ G S NL
Sbjct: 418 MEID----TNVKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKV 473
Query: 466 IKQI 469
IK +
Sbjct: 474 IKDV 477
|
| >2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A* Length = 456 | Back alignment and structure |
|---|
Score = 417 bits (1075), Expect = e-143
Identities = 105/468 (22%), Positives = 201/468 (42%), Gaps = 31/468 (6%)
Query: 15 KTNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVT--TEFICERIKESRQLGSFSEM 72
TN HV +++FP H A L+ + RLA F T I
Sbjct: 5 TTNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMHTMQCN- 63
Query: 73 GDAQQLVRIVPLPDGLEPEDDRKD--EAKMTRSISKVMPGYLEELIQKINQQEEDEKITC 130
++ + DG+ + + + + ++ + E ++C
Sbjct: 64 ------IKSYDISDGVPEGYVFAGRPQEDIELFTRAAPESFRQGMVMAVA--ETGRPVSC 115
Query: 131 VIADVTFGWALQVAAKLELKKASIYTSAPGILAMIMNIPKFIEAGIISSDGIVIKNEKIE 190
++AD +A +AA++ + +T+ P L+ + I + E +S ++E +
Sbjct: 116 LVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIGVSGIQ-GREDELLN 174
Query: 191 LSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSA---- 246
P + + +L +L + ++ + Q + + + F EL S
Sbjct: 175 FIPGMSKVRFRDLQEGIV-FGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDL 233
Query: 247 NKILPSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNE 306
L + + +GP P CL WL ++ P SV+Y +FG+++ +
Sbjct: 234 KSKLKTYLNIGPFNLITPP--PVVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVA 291
Query: 307 LALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACY 366
L+ LE + PF+ +R + + P+G + K +G +V WAPQ +VLAH +V +
Sbjct: 292 LSEALEASRVPFIWSLRDK----ARVHLPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAF 347
Query: 367 LTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKR 426
+THCGWNS E ++ GVP +C P+ D + D +IG+ +E G+ + +
Sbjct: 348 VTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIE---GGVFTKSGLMS 404
Query: 427 KVDELLSND---VVRKNALKLKELAQKSVTKEGSSSKNLEYFIKQITE 471
D++LS + +R+N L+E A ++V +GSS++N + +++
Sbjct: 405 CFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVSK 452
|
| >3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} PDB: 3hbj_A* Length = 454 | Back alignment and structure |
|---|
Score = 410 bits (1057), Expect = e-141
Identities = 112/476 (23%), Positives = 199/476 (41%), Gaps = 36/476 (7%)
Query: 7 ASESESLNKTN-VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTF---VTTEFICERIKE 62
++ +N N +HV +++FP H A L+ L ++A KVTF TT
Sbjct: 2 STFKNEMNGNNLLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSR 61
Query: 63 SRQLGSFSEMGDAQQLVRIVPLPDGLEPEDDR-KDEAKMTRSISKVMPGYLEELIQKINQ 121
S + ++ + DGL + + K M + +I +
Sbjct: 62 SNEFLPN---------IKYYNVHDGLPKGYVSSGNPREPIFLFIKAMQENFKHVIDEAVA 112
Query: 122 QEEDEKITCVIADVTFGWALQVAAKLELKKASIYTSAPGILAMIMNIPKFIEAGIISSDG 181
E + ITC++ D F + +A ++ K ++T+ P L + E
Sbjct: 113 -ETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREKTGSKE-- 169
Query: 182 IVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHE 241
V + I++ P P ++ + ++ + + ++ + F
Sbjct: 170 -VHDVKSIDVLPGFPELKASDLPEGVIKDID--VPFATMLHKMGLELPRANAVAINSFAT 226
Query: 242 LAPSA----NKILPSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSIS 297
+ P N ++ VGP S++ CL WLD+ SV+Y +FGS+
Sbjct: 227 IHPLIENELNSKFKLLLNVGPFNLTTPQ--RKVSDEHGCLEWLDQHENSSVVYISFGSVV 284
Query: 298 KLSQQQFNELALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKV 357
+ LA LE G PF+ R P G + + GK+V WAPQ ++
Sbjct: 285 TPPPHELTALAESLEECGFPFIWSFRGD----PKEKLPKGFLERTKTKGKIVAWAPQVEI 340
Query: 358 LAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNG 417
L H SV +LTH GWNS +E I GVP + P+ D +IG+ ++ NG
Sbjct: 341 LKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVD---NG 397
Query: 418 IIGRHEIKRKVDELLSND---VVRKNALKLKELAQKSVTKEGSSSKNLEYFIKQIT 470
++ + IK+ ++ +S++ ++R+ +KLKE A K+V + G+S+ + I+ +T
Sbjct: 398 VLTKESIKKALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVT 453
|
| >2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A* Length = 463 | Back alignment and structure |
|---|
Score = 368 bits (947), Expect = e-124
Identities = 104/481 (21%), Positives = 205/481 (42%), Gaps = 39/481 (8%)
Query: 9 ESESLNKTNVHVLLVSFPAQGHVASLMKLAHRLA--DCRIKVTFVTTEFICERIKESRQL 66
+NK ++ + P GH+AS ++ A L D + +T +F +S
Sbjct: 2 SMSDINKN-SELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIK 60
Query: 67 GSFSEMGDAQQLVRIVPLPDGLEPEDDR-KDEAKMTRSISKVMPGYLEELIQKINQQEED 125
+ ++++ LP+ P + K + + + +++ I+ I
Sbjct: 61 SVLASQPQ----IQLIDLPEVEPPPQELLKSPEFYILTFLESLIPHVKATIKTILSN--- 113
Query: 126 EKITCVIADVTFGWALQVAAKLELKKASIYTSAPGILAMIMNIPKFIEAGIISSDGIVIK 185
K+ ++ D + V + + TS G L++++++ + D
Sbjct: 114 -KVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIEEVF--DDSDRD 170
Query: 186 NEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPS 245
++ + + P + P+ L + N + + + + + I+ F +L S
Sbjct: 171 HQLLNI-PGISNQVPSNVLPDACFNKDGGYIAYYKL---AERFRDTKGIIVNTFSDLEQS 226
Query: 246 A-------NKILPSIIPVGPLI--ANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSI 296
+ ++ +P I VGPL+ ++ L WLD+QP SV++ FGS+
Sbjct: 227 SIDALYDHDEKIPPIYAVGPLLDLKGQPNPKLDQAQHDLILKWLDEQPDKSVVFLCFGSM 286
Query: 297 S-KLSQQQFNELALGLELAGQPFLCGVRPGFINGSSTNNPDGLV--AKVADFGKMVKWAP 353
Q E+ALGL+ +G FL P+G + ++ G + WAP
Sbjct: 287 GVSFGPSQIREIALGLKHSGVRFLWSNSAE-----KKVFPEGFLEWMELEGKGMICGWAP 341
Query: 354 QEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEP 413
Q +VLAH ++ +++HCGWNS +E + GVP L WP + + +W +GL L
Sbjct: 342 QVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRV 401
Query: 414 D---DNGIIGRHEIKRKVDELL-SNDVVRKNALKLKELAQKSVTKEGSSSKNLEYFIKQI 469
D + ++ EI++ + +L+ + +V K ++KE+++ +V GSS ++ I I
Sbjct: 402 DYRKGSDVVAAEEIEKGLKDLMDKDSIVHKKVQEMKEMSRNAVVDGGSSLISVGKLIDDI 461
Query: 470 T 470
T
Sbjct: 462 T 462
|
| >2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A* Length = 480 | Back alignment and structure |
|---|
Score = 362 bits (931), Expect = e-121
Identities = 122/482 (25%), Positives = 196/482 (40%), Gaps = 51/482 (10%)
Query: 19 HVLLVSFPAQGHVASLMKLAHRLADCR-IKVTFVTTEFICERIKESRQLGSFSEMGDAQQ 77
HV ++ P GH+ L++ A RL + VTFV + L S
Sbjct: 8 HVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLDSLPS------ 61
Query: 78 LVRIVPLPD-GLEPEDDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVT 136
+ V LP L L ++ + T ++ D+
Sbjct: 62 SISSVFLPPVDLTDLSSSTRIESRISLTVTRSNPELRKVFDSFVE--GGRLPTALVVDLF 119
Query: 137 FGWALQVAAKLELKKASIYTSAPGILAMIMNIPKFIEAGIISSDGIVIKNEKIELS-PYL 195
A VA + + Y + +L+ +++PK E + L P
Sbjct: 120 GTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSCE-----FRELTEPLMLPGC 174
Query: 196 PAASPAEFLWNCPGNPSLQT----LMFQYINVIRQNIEASDRILCTWFHELAPSA----- 246
+ +F ++++ + + ++ IL F EL P+A
Sbjct: 175 VPVAGKDF-------LDPAQDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQ 227
Query: 247 --NKILPSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQF 304
P + PVGPL+ G+ +E+ CL WLD QP GSV+Y +FGS L+ +Q
Sbjct: 228 EPGLDKPPVYPVGPLVNIGKQEAK-QTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQL 286
Query: 305 NELALGLELAGQPFLCGVRPGFINGSSTNN------------PDGLVAKVADFGKMVK-W 351
NELALGL + Q FL +R +S+ P G + + G ++ W
Sbjct: 287 NELALGLADSEQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFW 346
Query: 352 APQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWL 411
APQ +VLAHPS +LTHCGWNST+E + G+P + WP + + +D + L
Sbjct: 347 APQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRP 406
Query: 412 EPDDNGIIGRHEIKRKVDELLSND---VVRKNALKLKELAQKSVTKEGSSSKNLEYFIKQ 468
D+G++ R E+ R V L+ + VR +LKE A + + +G+S+K L +
Sbjct: 407 RAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVALK 466
Query: 469 IT 470
Sbjct: 467 WK 468
|
| >2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} Length = 424 | Back alignment and structure |
|---|
Score = 125 bits (315), Expect = 8e-32
Identities = 57/450 (12%), Positives = 122/450 (27%), Gaps = 84/450 (18%)
Query: 19 HVLLVSFPAQGHVASLMKLAHRLAD--CRIKVTFVTTEFICERIKESRQLGSFSEMGDAQ 76
H+ + P GHV + + L R V++ T+ ++K +
Sbjct: 14 HISFFNIPGHGHVNPSLGIVQELVARGHR--VSYAITDEFAAQVKAAG------------ 59
Query: 77 QLVRIVPLPDGLEPEDD-----RKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCV 131
V L E + +D+ L +L D++ +
Sbjct: 60 --ATPVVYDSILPKESNPEESWPEDQESAMGLFLDEAVRVLPQLEDAY----ADDRPDLI 113
Query: 132 IADVTFGWALQVAAKLELKKASIYTSAPGILAMIMNIPKFIEAGIISSDGIVIKNEKIEL 191
+ D+ A + K ++ + + ++P + + +
Sbjct: 114 VYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGFEEDVPAVQDPTADRGEEAAAPAGTGDA 173
Query: 192 SPYLPAASP--------AEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELA 243
A + FL + + A +R +
Sbjct: 174 EEGAEAEDGLVRFFTRLSAFLEEHGVDTPATEFLI-----------APNRCIVALPRTFQ 222
Query: 244 PSANKILPSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQ 303
+ + + VGP + G +W V+ A GS
Sbjct: 223 IKGDTVGDNYTFVGPTYGDRSHQG----------TWEGPGDGRPVLLIALGSAFTDHLDF 272
Query: 304 FNELALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSV 363
+ ++ + V P + +W PQ +L
Sbjct: 273 YRTCLSAVDGLDWHVVLSVGRFVDPADLGEVPPNVEV--------HQWVPQLDILTK--A 322
Query: 364 ACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDW-------KIGLWLEPDDN 416
+ ++TH G STME +S VP + P + +G + D
Sbjct: 323 SAFITHAGMGSTMEALSNAVPMVAVPQIAEQT--------MNAERIVELGLGRHIPRDQ- 373
Query: 417 GIIGRHEIKRKVDELLSNDVVRKNALKLKE 446
+ +++ V + S+ V + +++
Sbjct: 374 --VTAEKLREAVLAVASDPGVAERLAAVRQ 401
|
| >2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} Length = 430 | Back alignment and structure |
|---|
Score = 110 bits (276), Expect = 1e-26
Identities = 57/443 (12%), Positives = 116/443 (26%), Gaps = 87/443 (19%)
Query: 19 HVLLVSFPAQGHVASLMKLAHRLAD--CRIKVTFVTTEFICERIKESRQLGSFSEMGDAQ 76
H+ + S A GHV +++ L R VT+ +++ +
Sbjct: 9 HIAMFSIAAHGHVNPSLEVIRELVARGHR--VTYAIPPVFADKVAATG------------ 54
Query: 77 QLVRIVPLPDGLEPEDD-----RKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCV 131
R V L D L +L D+ V
Sbjct: 55 --PRPVLYHSTLPGPDADPEAWGSTLLDNVEPFLNDAIQALPQLADAY----ADDIPDLV 108
Query: 132 IADVTFGWALQVAAKLELKKASIYTSAPGILAMIMNIPKFIEAGIISSDGIVIKNEKIEL 191
+ D+T A +A + + S+ + + +
Sbjct: 109 LHDITSYPARVLARRWGVPAVSLSPNLVAWKGYEEEVAE--------------------- 147
Query: 192 SPYLPAASPAEFLWNCPGNPSLQTLMFQY-INVIRQNIEAS-DRILCTWFHELAPSANKI 249
P + + + + I + R L L P A+++
Sbjct: 148 ---PMWREPRQTERGRAYYARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPHADRV 204
Query: 250 LPSIIP-VGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELA 308
+ VG G W V+ + GS + E
Sbjct: 205 DEDVYTFVGACQ--GDRAEEGG--------WQRPAGAEKVVLVSLGSAFTKQPAFYRECV 254
Query: 309 LGL-ELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYL 367
L G + + PD + ++ W PQ +L + ++
Sbjct: 255 RAFGNLPGWHLVLQIGRKVTPAELGELPDNV--------EVHDWVPQLAILRQADL--FV 304
Query: 368 THCGWNSTMEGISMGVPFLCWPWGHDHLY----IKSCICDDWKIGLWLEPDDNGIIGRHE 423
TH G + EG++ P + P D ++ + L ++
Sbjct: 305 THAGAGGSQEGLATATPMIAVPQAVDQFGNADMLQGL-----GVARKLATEE---ATADL 356
Query: 424 IKRKVDELLSNDVVRKNALKLKE 446
++ L+ + V + +++
Sbjct: 357 LRETALALVDDPEVARRLRRIQA 379
|
| >3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* Length = 415 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 3e-23
Identities = 55/433 (12%), Positives = 116/433 (26%), Gaps = 66/433 (15%)
Query: 19 HVLLVSFPAQGHVASLMKLAHRLAD--CRIKVTFVTTEFICERIKESRQLG-SFSEMGDA 75
H+L+V+ + G + + + L R V++VT E + R G +
Sbjct: 22 HLLIVNVASHGLILPTLTVVTELVRRGHR--VSYVTAGGFAEPV---RAAGATVVPYQSE 76
Query: 76 QQLVRIVPLPDGLEPEDDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIAD- 134
+ D E + + L + + + + V+ D
Sbjct: 77 ------IIDADAAEVFGSDDLGVRPHLMYLRENVSVLRATAEAL----DGDVPDLVLYDD 126
Query: 135 VTFGWALQVAAKLELKKASIYTSAPGILAMIMNIPKFIEAGIISSDGIVIKNEKI-ELSP 193
F +AA+ + + + AG I + + + + +L
Sbjct: 127 FPFIAGQLLAARWRRPAVRLSAAFASNEHYSFSQDMVTLAGTIDPLDLPVFRDTLRDLLA 186
Query: 194 YLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSANKILPSI 253
+ WN +L + +
Sbjct: 187 EHGLSRSVVDCWNHVEQLNLV--------------------FVPK--AFQIAGDTFDDRF 224
Query: 254 IPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLEL 313
+ VGP + + G W V+ + G+ F + A +
Sbjct: 225 VFVGPCFDDRRFLG----------EWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDG 274
Query: 314 AGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWN 373
+ + + + P + W P KVL +TH G
Sbjct: 275 QPWHVVMTLGGQVDPAALGDLPPN--VEAHR------WVPHVKVL--EQATVCVTHGGMG 324
Query: 374 STMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLS 433
+ ME + G P + P D + + D +G L + + V + +
Sbjct: 325 TLMEALYWGRPLVVVPQSFDVQPMARRV-DQLGLGAVLPGEK---ADGDTLLAAVGAVAA 380
Query: 434 NDVVRKNALKLKE 446
+ + ++
Sbjct: 381 DPALLARVEAMRG 393
|
| >3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} Length = 402 | Back alignment and structure |
|---|
Score = 99.8 bits (249), Expect = 5e-23
Identities = 62/439 (14%), Positives = 124/439 (28%), Gaps = 77/439 (17%)
Query: 19 HVLLVSFPAQGHVASLMKLAHRLAD--CRIKVTFVTTEFICERIKESRQLGSFSEMGDAQ 76
H+L + GHV + L LA R +T+VTT + +K + G
Sbjct: 6 HILFANVQGHGHVYPSLGLVSELARRGHR--ITYVTTPLFADEVKAA---------G--- 51
Query: 77 QLVRIVPLPDGLEPED------DRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITC 130
+V + E ++ + L + + D
Sbjct: 52 --AEVVLYKSEFDTFHVPEVVKQEDAETQLHLVYVRENVAILRAAEEAL----GDNPPDL 105
Query: 131 VIAD-VTFGWALQVAAKLELKKASIYTSAPGILAMIMNIPKFIEAGIISSDGIVIKNEKI 189
V+ D F +AA+ + + + + G + + +
Sbjct: 106 VVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEHYSLFKELWKSNGQRHPADVEAVHSVL 165
Query: 190 -ELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSANK 248
+L +P + W+ ++ P A
Sbjct: 166 VDLLGKYGVDTPVKEYWDEIEGLTIV--------------------FLPK--SFQPFAET 203
Query: 249 ILPSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELA 308
VGP + + P V+ + G+ + F A
Sbjct: 204 FDERFAFVGPTLTGRDGQPGWQPPR----------PDAPVLLVSLGNQFNEHPEFFRACA 253
Query: 309 LGLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLT 368
+ + G ++ + + +W P VLAH LT
Sbjct: 254 QAFADTPWHVV--MAIG------GFLDPAVLGPLPPNVEAHQWIPFHSVLAH--ARACLT 303
Query: 369 HCGWNSTMEGISMGVPFLCWP-WGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRK 427
H + +E + GVP + P + + + + +G L PD + I+
Sbjct: 304 HGTTGAVLEAFAAGVPLVLVPHFATEAAPSAERV-IELGLGSVLRPDQ---LEPASIREA 359
Query: 428 VDELLSNDVVRKNALKLKE 446
V+ L ++ VR+ +++
Sbjct: 360 VERLAADSAVRERVRRMQR 378
|
| >3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* Length = 412 | Back alignment and structure |
|---|
Score = 89.7 bits (223), Expect = 1e-19
Identities = 82/460 (17%), Positives = 134/460 (29%), Gaps = 89/460 (19%)
Query: 1 MEFRYFASESESLNKTNVHVLLVSFPAQGHVASLMKLAHRLAD--CRIKVTFVTTEFICE 58
+ S + ++ VL S GH L+ LA VTF T E
Sbjct: 4 HHHHHHHHSSGHIEGRHMRVLFASLGTHGHTYPLLPLATAARAAGHE--VTFATGEGFAG 61
Query: 59 RIKES----RQLGS--FSEMGDAQQLVRIVPLPDGLEPEDDRK-DEAKMTRSISKVMPGY 111
+++ G F A ++ P+GL PE + + R I + +
Sbjct: 62 TLRKLGFEPVATGMPVFDGFLAALRIRFDTDSPEGLTPEQLSELPQIVFGRVIPQRVFDE 121
Query: 112 LEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKASIYTSAPGILAMIMNIPKF 171
L+ +I E + V+ +++ A A K + + +I +
Sbjct: 122 LQPVI-------ERLRPDLVVQEISNYGAGLAALKAGIPTICHGVGRDTPDDLTRSIEEE 174
Query: 172 I-----EAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQ 226
+ G ++L P F+ P PSLQ
Sbjct: 175 VRGLAQRLG-------------LDLPPGRIDGFGNPFIDIFP--PSLQ------------ 207
Query: 227 NIEASDRILCTWFHELAPSANKILPSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPG 286
+ P + P+ Q W LS D P
Sbjct: 208 -----------------EPEFRARPRRHELRPVPFAEQGDLPAW------LSSRDTARP- 243
Query: 287 SVIYAAFGSISKLSQQQFNELALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFG 346
++Y G+ S + + GL L P P ++
Sbjct: 244 -LVYLTLGTSSGGTVEVLRAAIDGLAGLDADVLVASGPSLDVSGLGEVPAN--VRLES-- 298
Query: 347 KMVKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWK 406
W PQ +L P V + H G +T+ + GVP L +PW D +
Sbjct: 299 ----WVPQAALL--PHVDLVVHHGGSGTTLGALGAGVPQLSFPWAGDSFANAQAV-AQAG 351
Query: 407 IGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKE 446
G L PD+ I + LL+ + R A +
Sbjct: 352 AGDHLLPDN---ISPDSVSGAAKRLLAEESYRAGARAVAA 388
|
| >2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} Length = 170 | Back alignment and structure |
|---|
Score = 69.9 bits (172), Expect = 3e-14
Identities = 33/170 (19%), Positives = 67/170 (39%), Gaps = 17/170 (10%)
Query: 279 WLDKQPPGSVIYAAFGS-ISKLSQQQFNELALGLELAGQPFLCGVRPGFINGSSTNNPDG 337
++ V+ + GS +S +++++ N +A L Q L N PD
Sbjct: 14 FVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRF--------DGNKPDT 65
Query: 338 LVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYI 397
L ++ KW PQ +L HP ++TH G N E I G+P + P D
Sbjct: 66 LGLNT----RLYKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQ-PD 120
Query: 398 KSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKEL 447
+ ++ + + ++ + ++++ ++N +KL +
Sbjct: 121 NIAHMKARGAAVRVDFNT---MSSTDLLNALKRVINDPSYKENVMKLSRI 167
|
| >3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* Length = 391 | Back alignment and structure |
|---|
Score = 70.2 bits (172), Expect = 3e-13
Identities = 22/168 (13%), Positives = 46/168 (27%), Gaps = 10/168 (5%)
Query: 279 WLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELAGQPFLCGVRPGFINGSSTNNPDGL 338
W + + G + + L P GV + + L
Sbjct: 211 WGAARTSARRVCICMGRMVLNATGPAPLLRAVAAATELP---GVE--AVIAVPPEHRALL 265
Query: 339 VAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIK 398
+ D ++ + P L + + G + +G+P L P D
Sbjct: 266 TD-LPDNARIAESVPLNLFL--RTCELVICAGGSGTAFTATRLGIPQLVLPQYFDQFDYA 322
Query: 399 SCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKE 446
+ G+ L + + + +L + A+KL +
Sbjct: 323 RNL-AAAGAGICLPDEQ-AQSDHEQFTDSIATVLGDTGFAAAAIKLSD 368
|
| >3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* Length = 391 | Back alignment and structure |
|---|
Score = 42.9 bits (101), Expect = 2e-04
Identities = 20/135 (14%), Positives = 41/135 (30%), Gaps = 11/135 (8%)
Query: 20 VLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKES-------RQLGSFSEM 72
VL+V P H+ +++ L L +V + + R +
Sbjct: 4 VLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAHGAGLTTAGIRGNDRTGDT 63
Query: 73 GDAQQLVRIVPLPDGLEPEDDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVI 132
G QL P + E R+ + ++++ L E ++ ++
Sbjct: 64 GGTTQLRFPNPAFGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEAWRPS----VLL 119
Query: 133 ADVTFGWALQVAAKL 147
DV + L
Sbjct: 120 VDVCALIGRVLGGLL 134
|
| >1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 Length = 416 | Back alignment and structure |
|---|
Score = 68.3 bits (167), Expect = 1e-12
Identities = 60/397 (15%), Positives = 108/397 (27%), Gaps = 83/397 (20%)
Query: 20 VLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLG-SFSEMGDAQQL 78
VLL +G V + LA RL ++ ER+ ++G +G Q +
Sbjct: 3 VLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERL---AEVGVPHVPVGLPQHM 59
Query: 79 VRIVPLPDGLEPEDDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFG 138
+ L+ + R + + + + E + V
Sbjct: 60 M--------LQEGMPPPPPEEEQRLAAMTVEMQFDAVPG---AAEGCAAVVAVGDLAAAT 108
Query: 139 WALQVAAKLELKKASIYTSAPGI-LAMIMNIPKFIEAGIISSDGIVIKNEKIELSPYLPA 197
VA KL G+ + P ++ SP+LP
Sbjct: 109 GVRSVAEKL------------GLPFFYSVPSPVYLA------------------SPHLPP 138
Query: 198 ASPAEFLWNCPGNPSLQTLMFQ--------YINVIRQN-----IEASDRILCTWFHELAP 244
A L +N R +E LA
Sbjct: 139 AYDEPTTPGVTDIRVLWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGERPLLAA 198
Query: 245 SANKILPSIIPVGPLIANGQPTGNFWSEDLTC----LSWLDKQPPGSVIYAAFGSISKLS 300
P + P+ P + Q S++ ++L P ++ FGS S
Sbjct: 199 D-----PVLAPLQPDVDAVQTGAWLLSDERPLPPELEAFLAAGSP--PVHIGFGSSSGRG 251
Query: 301 QQQFNELALG-LELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLA 359
++A+ + G+ + + G+ ++ D + + +
Sbjct: 252 IADAAKVAVEAIRAQGRRVI--LSRGWTELVLPDDRDDC--------FAIDEVNFQALF- 300
Query: 360 HPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLY 396
VA + H + GVP L P D Y
Sbjct: 301 -RRVAAVIHHGSAGTEHVATRAGVPQLVIPRNTDQPY 336
|
| >3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} PDB: 3h4i_A* 1pn3_A* 1pnv_A* Length = 404 | Back alignment and structure |
|---|
Score = 66.4 bits (162), Expect = 6e-12
Identities = 65/451 (14%), Positives = 119/451 (26%), Gaps = 98/451 (21%)
Query: 20 VLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLV 79
VL+ ++G L+ LA RL + ER E
Sbjct: 3 VLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAEV---------------- 46
Query: 80 RIVPLPDGLEPEDDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGW 139
G+ + R ++ PG E + + + + + + G
Sbjct: 47 -------GVPMVPVGRAVRAGAREPGELPPGAAEVVTEVVAEWFDK------VPAAIEGC 93
Query: 140 ALQVAAKLELKKASIYTSAPGI-LAMIMNIPKFIEAGIISSDGIVIKNEKIELSPYLPAA 198
V L + + +A + IP + P
Sbjct: 94 DAVVTTGL------LPAAVAVRSMAEKLGIPYR-------------------YTVLSPDH 128
Query: 199 SPAEF--LWNCPGNPSLQTLMFQYINVIRQNI-----------EASDRILCTWFHELAPS 245
P+E N L +N R +I +D+ L+P
Sbjct: 129 LPSEQSQAERDMYNQGADRLFGDAVNSHRASIGLPPVEHLYDYGYTDQPWLAADPVLSP- 187
Query: 246 ANKILPSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFN 305
+ G I Q S +L +L P +Y FGS +
Sbjct: 188 LRPTDLGTVQTGAWILPDQRP---LSAELE--GFLRAGSP--PVYVGFGSGPA-PAEAAR 239
Query: 306 ELALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVAC 365
+ G+ + + G+ + D +V + + VA
Sbjct: 240 VAIEAVRAQGRRVV--LSSGWAGLGRIDEGDDC--------LVVGEVNHQVLF--GRVAA 287
Query: 366 YLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIK 425
+ H G +T G P + P D Y + D +G+ + +
Sbjct: 288 VVHHGGAGTTTAVTRAGAPQVVVPQKADQPYYAGRV-ADLGVGVAHDGPT---PTVESLS 343
Query: 426 RKVDELLSNDVVRKNALKLKELAQKSVTKEG 456
+ L+ +R A +A + +G
Sbjct: 344 AALATALT-PGIRARA---AAVAGT-IRTDG 369
|
| >2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} Length = 441 | Back alignment and structure |
|---|
Score = 66.0 bits (161), Expect = 8e-12
Identities = 64/456 (14%), Positives = 131/456 (28%), Gaps = 92/456 (20%)
Query: 20 VLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKES----RQLGSFSEMGDA 75
V+ S ++ H+ L+ LA +V V + + E I + +G+ ++ D
Sbjct: 23 VVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITAAGLTAVPVGTDVDLVDF 82
Query: 76 -----QQLVRIVPLPDGLEPEDDRKDEAKMTRSISKVMPGYL-----EELIQKINQQEED 125
++ V D E + + + + P + + LI+ +
Sbjct: 83 MTHAGHDIIDYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRK 142
Query: 126 EKITCVIADVTFGWALQVAAKLELKKASIYTSAPGILAMIMNIPKFIEAGIISSDGIVIK 185
+ VI + A AA T P +
Sbjct: 143 WRPDLVIWEPLTFAAPIAAAV---------TGTPHARLLWG------------------- 174
Query: 186 NEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEA-------SDRILCTW 238
P + + FL P P + + +E + ++ W
Sbjct: 175 -------PDITTRARQNFLGLLPDQPE-EHREDPLAEWLTWTLEKYGGPAFDEEVVVGQW 226
Query: 239 FHELAPSANKILPSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISK 298
+ AP+A ++ + VG + WL +P + G S+
Sbjct: 227 TIDPAPAAIRLDTGLKTVGMRYVDYNGPSVVPE-------WLHDEPERRRVCLTLGISSR 279
Query: 299 LSQQQFNELALGLE-LAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKV 357
+ + L + +G+ + + V + P +
Sbjct: 280 ENSIGQVSIEELLGAVGDVDAEIIATFD------AQQLEGVANIPDNV-RTVGFVPMHAL 332
Query: 358 LAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDW-------KIGLW 410
L P+ A + H G S GVP + P G D G+
Sbjct: 333 L--PTCAATVHHGGPGSWHTAAIHGVPQVILPDGWDTG--------VRAQRTQEFGAGIA 382
Query: 411 LEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKE 446
L + + +++ V +L + R A ++++
Sbjct: 383 LPVPE---LTPDQLRESVKRVLDDPAHRAGAARMRD 415
|
| >2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} Length = 384 | Back alignment and structure |
|---|
Score = 62.9 bits (153), Expect = 6e-11
Identities = 33/182 (18%), Positives = 49/182 (26%), Gaps = 21/182 (11%)
Query: 270 WSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQ-----FNELALGLELAGQPFLCGVRP 324
S W+ + + GS LA L +
Sbjct: 194 TSRQCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDVELIVAAPD 253
Query: 325 GFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVP 384
+ V W P + V P+ + H G ST+ G+S GVP
Sbjct: 254 T---------VAEALRAEVP-QARVGWTPLDVVA--PTCDLLVHHAGGVSTLTGLSAGVP 301
Query: 385 FLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKL 444
L P G + D+ + L P + I EL + D + A L
Sbjct: 302 QLLIPKGSVLEAPARRV-ADYGAAIALLPGE---DSTEAIADSCQELQAKDTYARRAQDL 357
Query: 445 KE 446
Sbjct: 358 SR 359
|
| >2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} Length = 384 | Back alignment and structure |
|---|
Score = 43.6 bits (103), Expect = 9e-05
Identities = 18/129 (13%), Positives = 37/129 (28%), Gaps = 5/129 (3%)
Query: 20 VLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLG-SFSEMGDAQQL 78
+L V+ + V +L LA + +V + + + +G D
Sbjct: 3 ILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVV---TGVGLPAVATTDLPIR 59
Query: 79 VRIVPLPDGLEPEDDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFG 138
I +G PE D R + + ++ + ++
Sbjct: 60 HFITTDREG-RPEAIPSDPVAQARFTGRWFARMAASSLPRMLDFSRAWRPDLIVGGTMSY 118
Query: 139 WALQVAAKL 147
A +A L
Sbjct: 119 VAPLLALHL 127
|
| >3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* Length = 398 | Back alignment and structure |
|---|
Score = 61.8 bits (150), Expect = 1e-10
Identities = 24/170 (14%), Positives = 50/170 (29%), Gaps = 19/170 (11%)
Query: 279 WLDKQPPGSVIYAAFGSIS--KLSQQQFNELALGLELAGQPFLCGVRPGFINGSSTNNPD 336
L P + G+I + F+ +
Sbjct: 225 RLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGEVDADFVLALGDL---------DI 275
Query: 337 GLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLY 396
+ + + V W P +L + + H G + M I G+P L P D
Sbjct: 276 SPLGTLPRNVRAVGWTPLHTLL--RTCTAVVHHGGGGTVMTAIDAGIPQLLAPDPRDQFQ 333
Query: 397 IKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKE 446
+ + G+ L + + + L+ ++ +R A +++E
Sbjct: 334 HTAREAVS-RRGIGLVSTSDKVDADL-----LRRLIGDESLRTAAREVRE 377
|
| >3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* Length = 398 | Back alignment and structure |
|---|
Score = 47.1 bits (112), Expect = 7e-06
Identities = 23/134 (17%), Positives = 43/134 (32%), Gaps = 10/134 (7%)
Query: 19 HVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKES-----RQLGSFSEMG 73
VL VS P GH+ L++LA V E +R + +S +
Sbjct: 22 RVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVAEHA-DRAAAAGLEVVDVAPDYSAVK 80
Query: 74 DAQQLVRIVPLPDGLEPEDDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIA 133
+Q+ + P D + I+ V ++ + ++ D V+
Sbjct: 81 VFEQVAKDNPRFAETVATRPAIDLEEWGVQIAAVNRPLVDGTMALVDDYRPD----LVVY 136
Query: 134 DVTFGWALQVAAKL 147
+ L A +
Sbjct: 137 EQGATVGLLAADRA 150
|
| >4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* Length = 398 | Back alignment and structure |
|---|
Score = 59.4 bits (144), Expect = 8e-10
Identities = 25/175 (14%), Positives = 54/175 (30%), Gaps = 19/175 (10%)
Query: 278 SWLDKQPPGSVIYAAFGSISKLSQQQFNELALGL------ELAGQPFLCGVRPGFINGSS 331
SW+ ++ + FG+ L L L EL G + +
Sbjct: 219 SWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKL----GFE---VVVAV 271
Query: 332 TNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWG 391
++ + + + P ++ P+ + H G +T+ +S GVP + P
Sbjct: 272 SDKLAQTLQPLPEGVLAAGQFPLSAIM--PACDVVVHHGGHGTTLTCLSEGVPQVSVPVI 329
Query: 392 HDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKE 446
+ + G+ + + G + + + NA +L
Sbjct: 330 AEVWDSARLL-HAAGAGVEVPWEQ---AGVESVLAACARIRDDSSYVGNARRLAA 380
|
| >4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* Length = 398 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 2e-04
Identities = 20/132 (15%), Positives = 46/132 (34%), Gaps = 10/132 (7%)
Query: 20 VLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKES----RQLGSFSEMGDA 75
+L+++ ++G V L+ L+ L +V +E + + + +M +
Sbjct: 18 ILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTGAGLPFAPTCPSLDMPEV 77
Query: 76 QQLVRIVPLPDGLEPEDDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADV 135
R P +++ + R +++ +E + E K V+ +
Sbjct: 78 LSWDR--EGNRTTMPREEKPLLEHIGRGYGRLVLRMRDEALALA----ERWKPDLVLTET 131
Query: 136 TFGWALQVAAKL 147
VAA L
Sbjct: 132 YSLTGPLVAATL 143
|
| >1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 Length = 415 | Back alignment and structure |
|---|
Score = 59.5 bits (144), Expect = 9e-10
Identities = 33/226 (14%), Positives = 70/226 (30%), Gaps = 30/226 (13%)
Query: 231 SDRILCTWFHELAPSANKILPSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIY 290
+D LAP L ++ ++ + +P S +L ++LD PP +Y
Sbjct: 191 TDHPWVAADPVLAPLQPTDLDAVQTGAWILPDERP----LSPELA--AFLDAGPP--PVY 242
Query: 291 AAFGSISKLSQQQFNELALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVK 350
FGS+ + G+ + + G+ + ++ +
Sbjct: 243 LGFGSLGA-PADAVRVAIDAIRAHGRRVI--LSRGWADLVLPDDGADC--------FAIG 291
Query: 351 WAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLW 410
+ + VA + H G +T G P + P D Y + + +G+
Sbjct: 292 EVNHQVLF--GRVAAVIHHGGAGTTHVAARAGAPQILLPQMADQPYYAGRV-AELGVGVA 348
Query: 411 LEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKELAQKSVTKEG 456
+ + + L+ A +A + +G
Sbjct: 349 HDGPI---PTFDSLSAALATALT-PETHARA---TAVAGT-IRTDG 386
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 471 | |||
| 3hbf_A | 454 | Flavonoid 3-O-glucosyltransferase; glycosyltransfe | 100.0 | |
| 2pq6_A | 482 | UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl | 100.0 | |
| 2vch_A | 480 | Hydroquinone glucosyltransferase; glycosyltransfer | 100.0 | |
| 2c1x_A | 456 | UDP-glucose flavonoid 3-O glycosyltransferase; WIN | 100.0 | |
| 2acv_A | 463 | Triterpene UDP-glucosyl transferase UGT71G1; glyco | 100.0 | |
| 2iya_A | 424 | OLEI, oleandomycin glycosyltransferase; carbohydra | 100.0 | |
| 4amg_A | 400 | Snogd; transferase, polyketide biosynthesis, GT1 f | 100.0 | |
| 1iir_A | 415 | Glycosyltransferase GTFB; rossmann fold; 1.80A {Am | 100.0 | |
| 3rsc_A | 415 | CALG2; TDP, enediyne, structural genomics, PSI-2, | 100.0 | |
| 1rrv_A | 416 | Glycosyltransferase GTFD; GT-B, glycosyltransferas | 100.0 | |
| 3ia7_A | 402 | CALG4; glycosysltransferase, calicheamicin, enediy | 100.0 | |
| 3h4t_A | 404 | Glycosyltransferase GTFA, glycosyltransferase; van | 100.0 | |
| 2yjn_A | 441 | ERYCIII, glycosyltransferase; transferase, cytochr | 100.0 | |
| 2iyf_A | 430 | OLED, oleandomycin glycosyltransferase; antibiotic | 100.0 | |
| 2p6p_A | 384 | Glycosyl transferase; X-RAY-diffraction,urdamycina | 100.0 | |
| 3oti_A | 398 | CALG3; calicheamicin, TDP, structural genomics, PS | 100.0 | |
| 4fzr_A | 398 | SSFS6; structural genomics, PSI-biology, protein s | 100.0 | |
| 3tsa_A | 391 | SPNG, NDP-rhamnosyltransferase; glycosyltransferas | 100.0 | |
| 3otg_A | 412 | CALG1; calicheamicin, TDP, structural genomics, PS | 100.0 | |
| 3s2u_A | 365 | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape | 99.97 | |
| 2o6l_A | 170 | UDP-glucuronosyltransferase 2B7; drug metabolism, | 99.95 | |
| 1f0k_A | 364 | MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe | 99.88 | |
| 3hbm_A | 282 | UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter je | 99.69 | |
| 2jzc_A | 224 | UDP-N-acetylglucosamine transferase subunit ALG13; | 99.6 | |
| 1v4v_A | 376 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t | 99.56 | |
| 3ot5_A | 403 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.51 | |
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 99.49 | |
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 99.47 | |
| 3dzc_A | 396 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.46 | |
| 1vgv_A | 384 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.45 | |
| 3fro_A | 439 | GLGA glycogen synthase; glycosyltransferase family | 99.4 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 99.37 | |
| 3beo_A | 375 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a | 99.36 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 99.33 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 99.3 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 99.29 | |
| 4hwg_A | 385 | UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc | 99.28 | |
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 99.27 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 99.1 | |
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 98.88 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 98.87 | |
| 1rzu_A | 485 | Glycogen synthase 1; glycosyl-transferase, GT-B fo | 98.86 | |
| 2qzs_A | 485 | Glycogen synthase; glycosyl-transferase, GT-B fold | 98.82 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 98.67 | |
| 2xci_A | 374 | KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci | 98.62 | |
| 2hy7_A | 406 | Glucuronosyltransferase GUMK; glycosyltransferases | 98.54 | |
| 2f9f_A | 177 | First mannosyl transferase (WBAZ-1); alpha-beta pr | 98.39 | |
| 3q3e_A | 631 | HMW1C-like glycosyltransferase; N-glycosylation; 2 | 98.08 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 98.06 | |
| 1psw_A | 348 | ADP-heptose LPS heptosyltransferase II; structural | 97.88 | |
| 3tov_A | 349 | Glycosyl transferase family 9; structural genomics | 97.84 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 97.78 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 97.63 | |
| 3vue_A | 536 | GBSS-I, granule-bound starch synthase 1, chloropla | 97.6 | |
| 2bfw_A | 200 | GLGA glycogen synthase; glycosyltransferase family | 97.44 | |
| 3rhz_A | 339 | GTF3, nucleotide sugar synthetase-like protein; gl | 97.13 | |
| 2gt1_A | 326 | Lipopolysaccharide heptosyltransferase-1; GT-B fol | 96.84 | |
| 2phj_A | 251 | 5'-nucleotidase SURE; SURE protein, putative acid | 93.44 | |
| 3ty2_A | 261 | 5'-nucleotidase SURE; surviVal protein, phosphatas | 92.47 | |
| 2wqk_A | 251 | 5'-nucleotidase SURE; SURE protein, putative acid | 90.92 | |
| 3q0i_A | 318 | Methionyl-tRNA formyltransferase; structural genom | 90.71 | |
| 1g5t_A | 196 | COB(I)alamin adenosyltransferase; P-loop protein, | 90.31 | |
| 3nb0_A | 725 | Glycogen [starch] synthase isoform 2; glycogen syn | 90.02 | |
| 1j9j_A | 247 | Stationary phase surviVal protein; SURE protein, u | 88.11 | |
| 1l5x_A | 280 | SurviVal protein E; structural genomics, putative | 87.71 | |
| 3io3_A | 348 | DEHA2D07832P; chaperone, membrane traffic, ATPase; | 87.59 | |
| 4dzz_A | 206 | Plasmid partitioning protein PARF; deviant walker | 87.21 | |
| 2ywr_A | 216 | Phosphoribosylglycinamide formyltransferase; rossm | 86.85 | |
| 2bw0_A | 329 | 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase | 86.79 | |
| 3lqk_A | 201 | Dipicolinate synthase subunit B; flavoprotein, PSI | 86.42 | |
| 2e6c_A | 244 | 5'-nucleotidase SURE; SURE protein, cowith mangane | 85.97 | |
| 2yxb_A | 161 | Coenzyme B12-dependent mutase; alpha/beta, structu | 85.92 | |
| 3qxc_A | 242 | Dethiobiotin synthetase; DTBS, structural genomics | 85.62 | |
| 3tqr_A | 215 | Phosphoribosylglycinamide formyltransferase; purin | 85.47 | |
| 3t5t_A | 496 | Putative glycosyltransferase; GTB fold, pseudoglyc | 84.8 | |
| 3auf_A | 229 | Glycinamide ribonucleotide transformylase 1; struc | 84.7 | |
| 3fgn_A | 251 | Dethiobiotin synthetase; biotin biosynthesis, BIOD | 84.13 | |
| 3kjh_A | 254 | CO dehydrogenase/acetyl-COA synthase complex, acce | 83.62 | |
| 3av3_A | 212 | Phosphoribosylglycinamide formyltransferase; struc | 83.37 | |
| 1fmt_A | 314 | Methionyl-tRNA FMet formyltransferase; initiator t | 83.02 | |
| 3qjg_A | 175 | Epidermin biosynthesis protein EPID; structural ge | 82.39 | |
| 4dim_A | 403 | Phosphoribosylglycinamide synthetase; structural g | 82.1 | |
| 2v4n_A | 254 | Multifunctional protein SUR E; hydrolase, surviVal | 81.7 | |
| 3lrx_A | 158 | Putative hydrogenase; alpha-beta protein, structur | 80.95 | |
| 2qyt_A | 317 | 2-dehydropantoate 2-reductase; APC81190, porphyrom | 80.8 |
| >3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-70 Score=539.98 Aligned_cols=432 Identities=24% Similarity=0.408 Sum_probs=354.6
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCC--CeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCC-
Q 012083 16 TNVHVLLVSFPAQGHVASLMKLAHRLADCR--IKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPED- 92 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rG--h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~- 92 (471)
++.||+++|+|++||++|++.||+.|+.+| +.|||++++.+...+.+... ...++++|+.+|+++++..
T Consensus 12 ~~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~~--------~~~~~i~~~~ipdglp~~~~ 83 (454)
T 3hbf_A 12 NLLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSN--------EFLPNIKYYNVHDGLPKGYV 83 (454)
T ss_dssp CCCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSSS--------CCCTTEEEEECCCCCCTTCC
T ss_pred CCCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhcccc--------cCCCCceEEecCCCCCCCcc
Confidence 368999999999999999999999999999 99999999876655532210 1135799999999888762
Q ss_pred CcccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEEEeCchHHHHHHHhchhhhh
Q 012083 93 DRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKASIYTSAPGILAMIMNIPKFI 172 (471)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~ 172 (471)
...+...++..+...+.+.+++.++++..... .++|+||+|.++.|+..+|+++|||++.+++++++.+..+++.+.+.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~ 162 (454)
T 3hbf_A 84 SSGNPREPIFLFIKAMQENFKHVIDEAVAETG-KNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIR 162 (454)
T ss_dssp CCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHH
T ss_pred ccCChHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHH
Confidence 22333344455555555566666666433211 58999999999999999999999999999999999999988877655
Q ss_pred hhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhchhh----hh
Q 012083 173 EAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSA----NK 248 (471)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~----~~ 248 (471)
...... .......+..+|+++.++..++++ ++.. .....+.+++.+..+...+++.+++||+++||++. ++
T Consensus 163 ~~~~~~---~~~~~~~~~~iPg~p~~~~~dlp~-~~~~-~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~ 237 (454)
T 3hbf_A 163 EKTGSK---EVHDVKSIDVLPGFPELKASDLPE-GVIK-DIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNS 237 (454)
T ss_dssp HTCCHH---HHTTSSCBCCSTTSCCBCGGGSCT-TSSS-CTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHT
T ss_pred hhcCCC---ccccccccccCCCCCCcChhhCch-hhcc-CCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHHh
Confidence 431100 001123344689999999999994 4332 23344566777777888999999999999999864 34
Q ss_pred hCCCcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCC
Q 012083 249 ILPSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELAGQPFLCGVRPGFIN 328 (471)
Q Consensus 249 ~~~~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~ 328 (471)
..+++++|||++..... ...+.+.++.+||+.++++++|||||||+...+.+++.+++.+|++.+++|||+++..
T Consensus 238 ~~~~v~~vGPl~~~~~~--~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~~~~--- 312 (454)
T 3hbf_A 238 KFKLLLNVGPFNLTTPQ--RKVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFRGD--- 312 (454)
T ss_dssp TSSCEEECCCHHHHSCC--SCCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEECCSC---
T ss_pred cCCCEEEECCccccccc--ccccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCc---
Confidence 46799999999865431 1234467899999998888999999999998899999999999999999999999865
Q ss_pred CCCCCCCchhHHhhCCCcEEEeccchhhhhccCcceeeeeccCcchhhHhhhcCCceeecccccchhhhHHHHHhhhcce
Q 012083 329 GSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIG 408 (471)
Q Consensus 329 ~~~~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G 408 (471)
....+|++|.+++++|+++++|+||.++|+|+++++||||||+||++|++++|||||++|++.||+.||+++++.+|+|
T Consensus 313 -~~~~lp~~~~~~~~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~G 391 (454)
T 3hbf_A 313 -PKEKLPKGFLERTKTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIG 391 (454)
T ss_dssp -HHHHSCTTHHHHTTTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSE
T ss_pred -chhcCCHhHHhhcCCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCee
Confidence 2235889999999999999999999999999999999999999999999999999999999999999999999845999
Q ss_pred eeecCCCCCCcCHhHHHHHHHHHhCcH---HHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHh
Q 012083 409 LWLEPDDNGIIGRHEIKRKVDELLSND---VVRKNALKLKELAQKSVTKEGSSSKNLEYFIKQIT 470 (471)
Q Consensus 409 ~~~~~~~~~~~~~~~l~~~i~~ll~~~---~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~ 470 (471)
+.+.. ..+++++|.++|+++|+|+ +||+||+++++++++++.+||||++++++||++|+
T Consensus 392 v~l~~---~~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~i~ 453 (454)
T 3hbf_A 392 VGVDN---GVLTKESIKKALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVT 453 (454)
T ss_dssp EECGG---GSCCHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHT
T ss_pred EEecC---CCCCHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHh
Confidence 99974 6799999999999999987 89999999999999999999999999999999986
|
| >2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-65 Score=518.29 Aligned_cols=445 Identities=31% Similarity=0.597 Sum_probs=343.0
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCC---
Q 012083 16 TNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPED--- 92 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--- 92 (471)
+++||+++|+|++||++|++.||++|++|||+|||++++.+.+.+.+...... ....++++|++++++++..+
T Consensus 7 ~~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~----~~~~~~i~~~~l~~~lp~~~~~~ 82 (482)
T 2pq6_A 7 RKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKA----FDGFTDFNFESIPDGLTPMEGDG 82 (482)
T ss_dssp -CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC----------------CEEEEEECCCCC------
T ss_pred CCCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhcccccccc----ccCCCceEEEECCCCCCCccccc
Confidence 35799999999999999999999999999999999999887766543210000 00013899999998776521
Q ss_pred -CcccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEEEeCchHHHHHHHhchhhh
Q 012083 93 -DRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKASIYTSAPGILAMIMNIPKF 171 (471)
Q Consensus 93 -~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~ 171 (471)
...+...++..+...+.+.++++++.+.......+||+||+|.++.|+..+|+++|||++.++++++.....+.+++.+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~ 162 (482)
T 2pq6_A 83 DVSQDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSF 162 (482)
T ss_dssp ---CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHHH
T ss_pred CcchhHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHHHHHH
Confidence 1234555666665778888999998876420016899999999999999999999999999999999887777666766
Q ss_pred hhhCCCCCCccc--cc---ccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhchhh
Q 012083 172 IEAGIISSDGIV--IK---NEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSA 246 (471)
Q Consensus 172 ~~~~~~~~~~~~--~~---~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~ 246 (471)
...++.+..... .. ......+|+++.+...+++ .+.........+.+++.+..+...+++.+++||+++||++.
T Consensus 163 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~nt~~~le~~~ 241 (482)
T 2pq6_A 163 VERGIIPFKDESYLTNGCLETKVDWIPGLKNFRLKDIV-DFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESDV 241 (482)
T ss_dssp HHTTCSSCSSGGGGTSSGGGCBCCSSTTCCSCBGGGSC-GGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESSCGGGGHHH
T ss_pred HhcCCCCCccccccccccccCccccCCCCCCCchHHCc-hhhccCCcccHHHHHHHHHHHhhccCCEEEEcChHHHhHHH
Confidence 555655432110 00 1122345677666666665 33332222333455555555667889999999999999863
Q ss_pred ----hhhCCCcceeccccCC-CCC-------C--CCCCcCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHHHH
Q 012083 247 ----NKILPSIIPVGPLIAN-GQP-------T--GNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLE 312 (471)
Q Consensus 247 ----~~~~~~~~~vGp~~~~-~~~-------~--~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~ 312 (471)
++..+++++|||++.. ... . ...++.+.++.+|++.++++++|||||||+...+.+++..++.+|+
T Consensus 242 ~~~~~~~~~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~ 321 (482)
T 2pq6_A 242 INALSSTIPSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPEQLLEFAWGLA 321 (482)
T ss_dssp HHHHHTTCTTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCCHHHHHHHHHHHH
T ss_pred HHHHHHhCCcEEEEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCCcccCCHHHHHHHHHHHH
Confidence 3334789999999763 111 0 1123456678999999888899999999998888889999999999
Q ss_pred hCCCCEEEEEcCCCCCCCCCCCCchhHHhhCCCcEEEeccchhhhhccCcceeeeeccCcchhhHhhhcCCceeeccccc
Q 012083 313 LAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGH 392 (471)
Q Consensus 313 ~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~ 392 (471)
+.+++|||+++.....+....+|+++.++.++|+++++|+||.++|+|+++++||||||+||++||+++|||||++|++.
T Consensus 322 ~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~Eal~~GvP~i~~P~~~ 401 (482)
T 2pq6_A 322 NCKKSFLWIIRPDLVIGGSVIFSSEFTNEIADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFA 401 (482)
T ss_dssp HTTCEEEEECCGGGSTTTGGGSCHHHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCST
T ss_pred hcCCcEEEEEcCCccccccccCcHhHHHhcCCCEEEEeecCHHHHhcCCCCCEEEecCCcchHHHHHHcCCCEEecCccc
Confidence 99999999997542111222378899888999999999999999999999999999999999999999999999999999
Q ss_pred chhhhHHHHH-hhhcceeeecCCCCCCcCHhHHHHHHHHHhCcH---HHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHH
Q 012083 393 DHLYIKSCIC-DDWKIGLWLEPDDNGIIGRHEIKRKVDELLSND---VVRKNALKLKELAQKSVTKEGSSSKNLEYFIKQ 468 (471)
Q Consensus 393 DQ~~na~~v~-~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~---~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~ 468 (471)
||+.||++++ + +|+|+.+. ..++.++|.++|+++|+|+ +||+||+++++++++++.+||||..++++|+++
T Consensus 402 dQ~~na~~~~~~-~G~g~~l~----~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~ 476 (482)
T 2pq6_A 402 DQPTDCRFICNE-WEIGMEID----TNVKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKVIKD 476 (482)
T ss_dssp THHHHHHHHHHT-SCCEEECC----SSCCHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHH
T ss_pred chHHHHHHHHHH-hCEEEEEC----CCCCHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHH
Confidence 9999999997 6 79999995 4589999999999999998 699999999999999999999999999999998
Q ss_pred Hh
Q 012083 469 IT 470 (471)
Q Consensus 469 ~~ 470 (471)
++
T Consensus 477 ~~ 478 (482)
T 2pq6_A 477 VL 478 (482)
T ss_dssp TT
T ss_pred HH
Confidence 75
|
| >2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-62 Score=494.60 Aligned_cols=434 Identities=28% Similarity=0.438 Sum_probs=333.4
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhC-CCeEEEEeCCc--chhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCC-C
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADC-RIKVTFVTTEF--ICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPE-D 92 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~r-Gh~Vt~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~ 92 (471)
++||+++|+|++||++|+++||++|++| ||+|||++++. +...+.+... ....+++|+.+++...+. .
T Consensus 6 ~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~~--------~~~~~i~~~~l~~~~~~~~~ 77 (480)
T 2vch_A 6 TPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLD--------SLPSSISSVFLPPVDLTDLS 77 (480)
T ss_dssp CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC---------CCTTEEEEECCCCCCTTSC
T ss_pred CcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhcc--------ccCCCceEEEcCCCCCCCCC
Confidence 4899999999999999999999999998 99999999987 4444443210 112489999998653221 1
Q ss_pred CcccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCe-eEEEECCCcchHHHHHHHcCCceEEEeCchHHHHHHHhchhhh
Q 012083 93 DRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKI-TCVIADVTFGWALQVAAKLELKKASIYTSAPGILAMIMNIPKF 171 (471)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~p-D~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~ 171 (471)
...+....+......+.+.++++++.+.. . .++ |+||+|.++.|+..+|+++|||++.++++++..+..++++|..
T Consensus 78 ~~~~~~~~~~~~~~~~~~~l~~ll~~~~~-~--~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~ 154 (480)
T 2vch_A 78 SSTRIESRISLTVTRSNPELRKVFDSFVE-G--GRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKL 154 (480)
T ss_dssp TTCCHHHHHHHHHHTTHHHHHHHHHHHHH-T--TCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHhhhHHHHHHHHHhcc-C--CCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHH
Confidence 12233333434455667778888887642 1 578 9999999999999999999999999999999888777777655
Q ss_pred hhhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhchhhhhh--
Q 012083 172 IEAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSANKI-- 249 (471)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~-- 249 (471)
......+ +... .....+|+++++...+++..+. .. .. .....+.+.....++++.+++|++.+|+......
T Consensus 155 ~~~~~~~---~~~~-~~~~~~Pg~~p~~~~~l~~~~~-~~-~~-~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l~ 227 (480)
T 2vch_A 155 DETVSCE---FREL-TEPLMLPGCVPVAGKDFLDPAQ-DR-KD-DAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQ 227 (480)
T ss_dssp HHHCCSC---GGGC-SSCBCCTTCCCBCGGGSCGGGS-CT-TS-HHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHH
T ss_pred HhcCCCc---cccc-CCcccCCCCCCCChHHCchhhh-cC-Cc-hHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHHH
Confidence 4332111 1100 1112467777777777663322 11 11 2333444455566788899999999999753321
Q ss_pred -----CCCcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHHHHhCCCCEEEEEcC
Q 012083 250 -----LPSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELAGQPFLCGVRP 324 (471)
Q Consensus 250 -----~~~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~ 324 (471)
.+++++|||++...... ...+.+.++.+||+.++++++|||||||+...+.+++.+++.+|++++++|||+++.
T Consensus 228 ~~~~~~~~v~~vGpl~~~~~~~-~~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~ 306 (480)
T 2vch_A 228 EPGLDKPPVYPVGPLVNIGKQE-AKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRS 306 (480)
T ss_dssp SCCTTCCCEEECCCCCCCSCSC-C-----CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred hcccCCCcEEEEeccccccccc-cCccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCCcEEEEECC
Confidence 36899999998754210 012356788999999888899999999998889999999999999999999999986
Q ss_pred CCCCC-----------C-CCCCCchhHHhhCCCcEEEe-ccchhhhhccCcceeeeeccCcchhhHhhhcCCceeecccc
Q 012083 325 GFING-----------S-STNNPDGLVAKVADFGKMVK-WAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWG 391 (471)
Q Consensus 325 ~~~~~-----------~-~~~lp~~~~~~~~~nv~~~~-~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~ 391 (471)
....+ . ...+|++|.+++.++.+++. |+||.+||+|++|++||||||+||++||+++|||||++|++
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~P~~ 386 (480)
T 2vch_A 307 PSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLY 386 (480)
T ss_dssp CCSSTTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCS
T ss_pred ccccccccccccccccchhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCEEecccc
Confidence 42111 1 12588899888888888875 99999999999999999999999999999999999999999
Q ss_pred cchhhhHHHH-HhhhcceeeecCCCCCCcCHhHHHHHHHHHhC---cHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHH
Q 012083 392 HDHLYIKSCI-CDDWKIGLWLEPDDNGIIGRHEIKRKVDELLS---NDVVRKNALKLKELAQKSVTKEGSSSKNLEYFIK 467 (471)
Q Consensus 392 ~DQ~~na~~v-~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~---~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~ 467 (471)
.||+.||+++ ++ +|+|+.+...+.+.++.++|.++|+++|+ +++||+||+++++++++++.+||+|..++++|++
T Consensus 387 ~DQ~~na~~l~~~-~G~g~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~~~~~v~ 465 (480)
T 2vch_A 387 AEQKMNAVLLSED-IRAALRPRAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVAL 465 (480)
T ss_dssp TTHHHHHHHHHHT-TCCEECCCCCTTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHH
T ss_pred ccchHHHHHHHHH-hCeEEEeecccCCccCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Confidence 9999999997 57 89999997522237999999999999998 7899999999999999999999999999999999
Q ss_pred HHh
Q 012083 468 QIT 470 (471)
Q Consensus 468 ~~~ 470 (471)
+++
T Consensus 466 ~~~ 468 (480)
T 2vch_A 466 KWK 468 (480)
T ss_dssp HHH
T ss_pred HHH
Confidence 875
|
| >2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-63 Score=496.97 Aligned_cols=435 Identities=24% Similarity=0.425 Sum_probs=332.4
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCe--EEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCC-
Q 012083 16 TNVHVLLVSFPAQGHVASLMKLAHRLADCRIK--VTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPED- 92 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~--Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~- 92 (471)
+++||+++|+|++||++|++.||+.|++|||. |||++++.....+.+... +....+++|+.++++++...
T Consensus 6 ~~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~-------~~~~~~i~~~~i~~glp~~~~ 78 (456)
T 2c1x_A 6 TNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSM-------HTMQCNIKSYDISDGVPEGYV 78 (456)
T ss_dssp -CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC--------------CTTEEEEECCCCCCTTCC
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhcccc-------ccCCCceEEEeCCCCCCCccc
Confidence 35899999999999999999999999999755 688888765544432210 00124899999998776542
Q ss_pred CcccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEEEeCchHHHHHHHhchhhhh
Q 012083 93 DRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKASIYTSAPGILAMIMNIPKFI 172 (471)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~ 172 (471)
........+..+...+...++++++++.+... .+||+||+|.++.|+..+|+++|||+|.++++++..+..+.+.+.+.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~-~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 157 (456)
T 2c1x_A 79 FAGRPQEDIELFTRAAPESFRQGMVMAVAETG-RPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIR 157 (456)
T ss_dssp CCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHT-CCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHH
T ss_pred ccCChHHHHHHHHHHhHHHHHHHHHHHHhccC-CCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHHHH
Confidence 11223333444444445556666665442211 69999999999999999999999999999999888776665554432
Q ss_pred hh-CCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhchhh----h
Q 012083 173 EA-GIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSA----N 247 (471)
Q Consensus 173 ~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~----~ 247 (471)
.. +..+. .....+.+..+|+++.++..+++. .+........+.+.+.+......+++.+++||+++||++. +
T Consensus 158 ~~~~~~~~--~~~~~~~~~~~pg~~~~~~~~lp~-~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~~ 234 (456)
T 2c1x_A 158 EKIGVSGI--QGREDELLNFIPGMSKVRFRDLQE-GIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLK 234 (456)
T ss_dssp HHHCSSCC--TTCTTCBCTTSTTCTTCBGGGSCT-TTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHH
T ss_pred hccCCccc--ccccccccccCCCCCcccHHhCch-hhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHHHHHHHH
Confidence 22 21110 011123334578888777777773 2222222223444455555556789999999999999863 3
Q ss_pred hhCCCcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHHHHhCCCCEEEEEcCCCC
Q 012083 248 KILPSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELAGQPFLCGVRPGFI 327 (471)
Q Consensus 248 ~~~~~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~ 327 (471)
+..+++++|||+...... ..++.+.++.+|++.++++++|||||||+...+.+++..++.+|++.+++|||+++..
T Consensus 235 ~~~~~~~~vGpl~~~~~~--~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~-- 310 (456)
T 2c1x_A 235 SKLKTYLNIGPFNLITPP--PVVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSLRDK-- 310 (456)
T ss_dssp HHSSCEEECCCHHHHC-----------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEEECCGG--
T ss_pred hcCCCEEEecCcccCccc--ccccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcCCeEEEEECCc--
Confidence 445799999999865321 1134456788999998888999999999988888899999999999999999999764
Q ss_pred CCCCCCCCchhHHhhCCCcEEEeccchhhhhccCcceeeeeccCcchhhHhhhcCCceeecccccchhhhHHHHHhhhcc
Q 012083 328 NGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKI 407 (471)
Q Consensus 328 ~~~~~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~ 407 (471)
....+|++|.++.++|+++++|+||.++|+|+++++||||||+||++||+++|||||++|++.||+.||+++++.||+
T Consensus 311 --~~~~l~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~ 388 (456)
T 2c1x_A 311 --ARVHLPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEI 388 (456)
T ss_dssp --GGGGSCTTHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCC
T ss_pred --chhhCCHHHHhhcCCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCe
Confidence 233578888888899999999999999999999999999999999999999999999999999999999999993399
Q ss_pred eeeecCCCCCCcCHhHHHHHHHHHhCcH---HHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHh
Q 012083 408 GLWLEPDDNGIIGRHEIKRKVDELLSND---VVRKNALKLKELAQKSVTKEGSSSKNLEYFIKQIT 470 (471)
Q Consensus 408 G~~~~~~~~~~~~~~~l~~~i~~ll~~~---~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~ 470 (471)
|+.+.. ..++.++|.++|+++|+|+ +||+||+++++++++++.+||||.+++++||++++
T Consensus 389 g~~l~~---~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~~~ 451 (456)
T 2c1x_A 389 GVRIEG---GVFTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVS 451 (456)
T ss_dssp EEECGG---GSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHT
T ss_pred EEEecC---CCcCHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHH
Confidence 999974 6789999999999999997 89999999999999999999999999999999875
|
| >2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-61 Score=480.93 Aligned_cols=427 Identities=24% Similarity=0.421 Sum_probs=329.7
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhC--CCeEEEEeCCcch-----hhhHHhhhcCCCCccCCCCCCeEEEeCCCCC-
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADC--RIKVTFVTTEFIC-----ERIKESRQLGSFSEMGDAQQLVRIVPLPDGL- 88 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~r--Gh~Vt~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~- 88 (471)
++||+++|+|++||++|++.||+.|++| ||+|||++++.+. ..+.+.. ....+++|+.+|++.
T Consensus 9 ~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~---------~~~~~i~~~~lp~~~~ 79 (463)
T 2acv_A 9 NSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVL---------ASQPQIQLIDLPEVEP 79 (463)
T ss_dssp CEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHH---------CSCTTEEEEECCCCCC
T ss_pred CCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhcc---------cCCCCceEEECCCCCC
Confidence 5899999999999999999999999999 9999999998763 2222210 122489999999763
Q ss_pred CCCCCcccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEEEeCchHHHHHHHhch
Q 012083 89 EPEDDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKASIYTSAPGILAMIMNI 168 (471)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~ 168 (471)
+..+........+......+.+.++++++.+.. .+||+||+|.++.|+..+|+++|||++.++++++..+..++++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~----~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~ 155 (463)
T 2acv_A 80 PPQELLKSPEFYILTFLESLIPHVKATIKTILS----NKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSL 155 (463)
T ss_dssp CCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHCC----TTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHG
T ss_pred CcccccCCccHHHHHHHHhhhHHHHHHHHhccC----CCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHH
Confidence 221101111111333345667778888887622 6999999999999999999999999999999999887777766
Q ss_pred hhhhhhCCCCCCccccccc--ccccCCCC-CCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhchh
Q 012083 169 PKFIEAGIISSDGIVIKNE--KIELSPYL-PAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPS 245 (471)
Q Consensus 169 p~~~~~~~~~~~~~~~~~~--~~~~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~ 245 (471)
+...... + +..... ....+|++ +++...+++..+... .. ....+.+.....++++.+++||+.+|++.
T Consensus 156 ~~~~~~~--~---~~~~~~~~~~~~~pg~~~~~~~~~l~~~~~~~---~~-~~~~~~~~~~~~~~~~~~l~nt~~ele~~ 226 (463)
T 2acv_A 156 KNRQIEE--V---FDDSDRDHQLLNIPGISNQVPSNVLPDACFNK---DG-GYIAYYKLAERFRDTKGIIVNTFSDLEQS 226 (463)
T ss_dssp GGSCTTC--C---CCCSSGGGCEECCTTCSSCEEGGGSCHHHHCT---TT-HHHHHHHHHHHHTTSSEEEESCCHHHHHH
T ss_pred HhhcccC--C---CCCccccCceeECCCCCCCCChHHCchhhcCC---ch-HHHHHHHHHHhcccCCEEEECCHHHHhHH
Confidence 5432110 0 111010 02356777 666666555222111 11 33444445556688899999999999986
Q ss_pred hhhh-------CCCcceeccccCCCC-CC-CCCCcCcchhcccccCCCCCcEEEEecCccc-cCCHHHHHHHHHHHHhCC
Q 012083 246 ANKI-------LPSIIPVGPLIANGQ-PT-GNFWSEDLTCLSWLDKQPPGSVIYAAFGSIS-KLSQQQFNELALGLELAG 315 (471)
Q Consensus 246 ~~~~-------~~~~~~vGp~~~~~~-~~-~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~-~~~~~~~~~~~~al~~~~ 315 (471)
...+ .+++++|||+..... .. ...++.+.++.+|++.++++++|||+|||+. ..+.+++..++.+|++.+
T Consensus 227 ~~~~l~~~~~p~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~ 306 (463)
T 2acv_A 227 SIDALYDHDEKIPPIYAVGPLLDLKGQPNPKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSG 306 (463)
T ss_dssp HHHHHHHHCTTSCCEEECCCCCCSSCCCBTTBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHhccccCCcEEEeCCCcccccccccccccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCC
Confidence 5332 578999999986532 10 0001345688999999888899999999998 888888999999999999
Q ss_pred CCEEEEEcCCCCCCCCCCCCchhHHhh--CCCcEEEeccchhhhhccCcceeeeeccCcchhhHhhhcCCceeecccccc
Q 012083 316 QPFLCGVRPGFINGSSTNNPDGLVAKV--ADFGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHD 393 (471)
Q Consensus 316 ~~~i~~~~~~~~~~~~~~lp~~~~~~~--~~nv~~~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~D 393 (471)
++|||+++.. ...+|++|.++. ++|+++++|+||.++|+|+++++||||||+||++||+++|||||++|++.|
T Consensus 307 ~~~l~~~~~~-----~~~l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~~d 381 (463)
T 2acv_A 307 VRFLWSNSAE-----KKVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAE 381 (463)
T ss_dssp CEEEEECCCC-----GGGSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTT
T ss_pred CcEEEEECCC-----cccCChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccchhh
Confidence 9999999752 124778888887 899999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHH-Hhhhcceeee-cCCCCC--CcCHhHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHH
Q 012083 394 HLYIKSCI-CDDWKIGLWL-EPDDNG--IIGRHEIKRKVDELLS-NDVVRKNALKLKELAQKSVTKEGSSSKNLEYFIKQ 468 (471)
Q Consensus 394 Q~~na~~v-~~~~G~G~~~-~~~~~~--~~~~~~l~~~i~~ll~-~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~ 468 (471)
|+.||+++ ++ +|+|+.+ ...+.. .++.++|.++|+++|+ +++||+||+++++++++++.+||||..++++||++
T Consensus 382 Q~~Na~~lv~~-~g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~ 460 (463)
T 2acv_A 382 QQLNAFRLVKE-WGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKDSIVHKKVQEMKEMSRNAVVDGGSSLISVGKLIDD 460 (463)
T ss_dssp HHHHHHHHHHT-SCCEEESCSSCCTTCCCCCHHHHHHHHHHHTCTTCTHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHH
T ss_pred hHHHHHHHHHH-cCeEEEEecccCCCCccccHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHH
Confidence 99999995 78 7999999 311124 6899999999999997 47999999999999999999999999999999999
Q ss_pred HhC
Q 012083 469 ITE 471 (471)
Q Consensus 469 ~~~ 471 (471)
+++
T Consensus 461 ~~~ 463 (463)
T 2acv_A 461 ITG 463 (463)
T ss_dssp HHC
T ss_pred hcC
Confidence 864
|
| >2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-47 Score=378.03 Aligned_cols=388 Identities=15% Similarity=0.194 Sum_probs=268.2
Q ss_pred ccccccCCCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCC
Q 012083 8 SESESLNKTNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDG 87 (471)
Q Consensus 8 ~~~~~m~~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 87 (471)
+++.|+.++.|||+|+++++.||++|+++||++|+++||+|+|++++.+.+.+.+. |++|++++..
T Consensus 3 ~~~~~~~m~~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~~--------------g~~~~~~~~~ 68 (424)
T 2iya_A 3 SEHRSASVTPRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKAA--------------GATPVVYDSI 68 (424)
T ss_dssp --------CCCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH--------------TCEEEECCCC
T ss_pred cccccCCcccceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHhC--------------CCEEEecCcc
Confidence 45555434568999999999999999999999999999999999999998888776 8899998876
Q ss_pred CCCCC-C----cccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEEEeCchHHHH
Q 012083 88 LEPED-D----RKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKASIYTSAPGIL 162 (471)
Q Consensus 88 ~~~~~-~----~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~ 162 (471)
++... . ..+....+..+........+++.+.+++ .+||+||+|.+..++..+|+++|||++.+++.+....
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~ 144 (424)
T 2iya_A 69 LPKESNPEESWPEDQESAMGLFLDEAVRVLPQLEDAYAD----DRPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYE 144 (424)
T ss_dssp SCCTTCTTCCCCSSHHHHHHHHHHHHHHHHHHHHHHTTT----SCCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCT
T ss_pred ccccccchhhcchhHHHHHHHHHHHHHHHHHHHHHHHhc----cCCCEEEEcCcccHHHHHHHhcCCCEEEEeccccccc
Confidence 54321 1 2233333433333333344455444444 8999999999888999999999999999987654110
Q ss_pred HHHhchhhhhhhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhh----------hccCc
Q 012083 163 AMIMNIPKFIEAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQN----------IEASD 232 (471)
Q Consensus 163 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~ 232 (471)
.. ...+.....+..+ .... ...|. ...... .+.........+.+.+.+.... ...++
T Consensus 145 ~~-~~~~~~~~~~~~~------~~~~-~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 211 (424)
T 2iya_A 145 GF-EEDVPAVQDPTAD------RGEE-AAAPA----GTGDAE-EGAEAEDGLVRFFTRLSAFLEEHGVDTPATEFLIAPN 211 (424)
T ss_dssp TH-HHHSGGGSCCCC---------------------------------HHHHHHHHHHHHHHHHHTTCCSCHHHHHHCCS
T ss_pred cc-ccccccccccccc------cccc-ccccc----ccccch-hhhccchhHHHHHHHHHHHHHHcCCCCCHHHhccCCC
Confidence 00 0000000000000 0000 00000 000000 0000000001111111111111 12578
Q ss_pred EEEEcchhhhchhhhhhCCCcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHHHH
Q 012083 233 RILCTWFHELAPSANKILPSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLE 312 (471)
Q Consensus 233 ~~l~~s~~~l~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~ 312 (471)
.++++++++|+++...+++++++|||+..... +..+|++..+++++|||++||......+.+..++++++
T Consensus 212 ~~l~~~~~~l~~~~~~~~~~~~~vGp~~~~~~----------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~ 281 (424)
T 2iya_A 212 RCIVALPRTFQIKGDTVGDNYTFVGPTYGDRS----------HQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVD 281 (424)
T ss_dssp SEEESSCTTTSTTGGGCCTTEEECCCCCCCCG----------GGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHT
T ss_pred cEEEEcchhhCCCccCCCCCEEEeCCCCCCcc----------cCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHh
Confidence 89999999999875567789999999764321 12267776666789999999998667788889999999
Q ss_pred hCCCCEEEEEcCCCCCCCCCCCCchhHHhhCCCcEEEeccchhhhhccCcceeeeeccCcchhhHhhhcCCceeeccccc
Q 012083 313 LAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGH 392 (471)
Q Consensus 313 ~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~ 392 (471)
+.+.+++|.++... ..+.+ +..++|+++++|+||.++|+|+++ ||||||+||++||+++|||+|++|...
T Consensus 282 ~~~~~~~~~~g~~~-------~~~~~-~~~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~ 351 (424)
T 2iya_A 282 GLDWHVVLSVGRFV-------DPADL-GEVPPNVEVHQWVPQLDILTKASA--FITHAGMGSTMEALSNAVPMVAVPQIA 351 (424)
T ss_dssp TCSSEEEEECCTTS-------CGGGG-CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSH
T ss_pred cCCcEEEEEECCcC-------ChHHh-ccCCCCeEEecCCCHHHHHhhCCE--EEECCchhHHHHHHHcCCCEEEecCcc
Confidence 88889999887541 01111 124688999999999999988776 999999999999999999999999999
Q ss_pred chhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Q 012083 393 DHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKELAQK 450 (471)
Q Consensus 393 DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~ 450 (471)
||..||.++++ +|+|+.+.. ..++.++|.++|+++|+|++++++++++++++++
T Consensus 352 dQ~~na~~l~~-~g~g~~~~~---~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~ 405 (424)
T 2iya_A 352 EQTMNAERIVE-LGLGRHIPR---DQVTAEKLREAVLAVASDPGVAERLAAVRQEIRE 405 (424)
T ss_dssp HHHHHHHHHHH-TTSEEECCG---GGCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHT
T ss_pred chHHHHHHHHH-CCCEEEcCc---CCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHh
Confidence 99999999999 799999974 5689999999999999999999999999999976
|
| >4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-45 Score=363.82 Aligned_cols=358 Identities=16% Similarity=0.185 Sum_probs=233.9
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCC----
Q 012083 16 TNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPE---- 91 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~---- 91 (471)
+.|||||+++|+.||++|+++||++|++|||+|||++++.+.+..+ . ++.+..+.......
T Consensus 21 ~~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~~~~-~--------------g~~~~~~~~~~~~~~~~~ 85 (400)
T 4amg_A 21 QSMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRAVAE-A--------------GLCAVDVSPGVNYAKLFV 85 (400)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHHHHT-T--------------TCEEEESSTTCCSHHHHS
T ss_pred CCCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhhHHh-c--------------CCeeEecCCchhHhhhcc
Confidence 3589999999999999999999999999999999999988776433 3 77777765432211
Q ss_pred -------C----CcccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEEEeCchHH
Q 012083 92 -------D----DRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKASIYTSAPG 160 (471)
Q Consensus 92 -------~----~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~ 160 (471)
. .......+...+.......+.++++.+++ ++||+||+|.++.++..+|+.+|||++.+...+..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~ 161 (400)
T 4amg_A 86 PDDTDVTDPMHSEGLGEGFFAEMFARVSAVAVDGALRTARS----WRPDLVVHTPTQGAGPLTAAALQLPCVELPLGPAD 161 (400)
T ss_dssp CCC------------CHHHHHHHHHHHHHHHHHHHHHHHHH----HCCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTT
T ss_pred ccccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHh----cCCCEEEECcchHHHHHHHHHcCCCceeecccccc
Confidence 0 00011111222222233334445454444 89999999999999999999999999987654432
Q ss_pred HHHHHhchhhhhhhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhh-hccCcEEEEcch
Q 012083 161 ILAMIMNIPKFIEAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQN-IEASDRILCTWF 239 (471)
Q Consensus 161 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~s~ 239 (471)
......... .+.+.....+..-. .......+....
T Consensus 162 ~~~~~~~~~--------------------------------------------~~~l~~~~~~~~~~~~~~~~~~~~~~~ 197 (400)
T 4amg_A 162 SEPGLGALI--------------------------------------------RRAMSKDYERHGVTGEPTGSVRLTTTP 197 (400)
T ss_dssp CCHHHHHHH--------------------------------------------HHHTHHHHHHTTCCCCCSCEEEEECCC
T ss_pred cccchhhHH--------------------------------------------HHHHHHHHHHhCCCcccccchhhcccC
Confidence 111100000 00000000000000 011222222222
Q ss_pred hhhchh--hhhhCCCcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccCC--HHHHHHHHHHHHhCC
Q 012083 240 HELAPS--ANKILPSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLS--QQQFNELALGLELAG 315 (471)
Q Consensus 240 ~~l~~~--~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~--~~~~~~~~~al~~~~ 315 (471)
+.+... .....+....+.+... .....+.+|++..+++++|||||||+.... .+.+..+++++++.+
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~ 268 (400)
T 4amg_A 198 PSVEALLPEDRRSPGAWPMRYVPY---------NGGAVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVD 268 (400)
T ss_dssp HHHHHTSCGGGCCTTCEECCCCCC---------CCCEECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSS
T ss_pred chhhccCcccccCCcccCcccccc---------cccccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccC
Confidence 221111 0011112222222111 122334478888888899999999985544 356888999999999
Q ss_pred CCEEEEEcCCCCCCCCCCCCchhHHhhCCCcEEEeccchhhhhccCcceeeeeccCcchhhHhhhcCCceeecccccchh
Q 012083 316 QPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHL 395 (471)
Q Consensus 316 ~~~i~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~ 395 (471)
.+++|.+++. ...... ..++|+++++|+||.++|+|+++ ||||||+||++||+++|||+|++|++.||+
T Consensus 269 ~~~v~~~~~~----~~~~~~-----~~~~~v~~~~~~p~~~lL~~~~~--~v~h~G~~s~~Eal~~GvP~v~~P~~~dQ~ 337 (400)
T 4amg_A 269 AEFVLTLGGG----DLALLG-----ELPANVRVVEWIPLGALLETCDA--IIHHGGSGTLLTALAAGVPQCVIPHGSYQD 337 (400)
T ss_dssp SEEEEECCTT----CCCCCC-----CCCTTEEEECCCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCC---CH
T ss_pred ceEEEEecCc----cccccc-----cCCCCEEEEeecCHHHHhhhhhh--eeccCCccHHHHHHHhCCCEEEecCcccHH
Confidence 9999998765 111111 23788999999999999988776 999999999999999999999999999999
Q ss_pred hhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHH
Q 012083 396 YIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKELAQKSVTKEGSSSKNLEYFIKQI 469 (471)
Q Consensus 396 ~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~ 469 (471)
.||+++++ +|+|+.++. ...+. ++|+++|+|++||+||+++++++++. .+. ..+...++++
T Consensus 338 ~na~~v~~-~G~g~~l~~---~~~~~----~al~~lL~d~~~r~~a~~l~~~~~~~----~~~-~~~a~~le~l 398 (400)
T 4amg_A 338 TNRDVLTG-LGIGFDAEA---GSLGA----EQCRRLLDDAGLREAALRVRQEMSEM----PPP-AETAAXLVAL 398 (400)
T ss_dssp HHHHHHHH-HTSEEECCT---TTCSH----HHHHHHHHCHHHHHHHHHHHHHHHTS----CCH-HHHHHHHHHH
T ss_pred HHHHHHHH-CCCEEEcCC---CCchH----HHHHHHHcCHHHHHHHHHHHHHHHcC----CCH-HHHHHHHHHh
Confidence 99999999 799999974 44554 57888999999999999999999874 333 3444555554
|
| >1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-43 Score=349.71 Aligned_cols=372 Identities=16% Similarity=0.152 Sum_probs=254.5
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCC-CC-cc
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPE-DD-RK 95 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~-~~ 95 (471)
|||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+.+. |++|+.++...... .. ..
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~--------------g~~~~~i~~~~~~~~~~~~~ 66 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAEV--------------GVPHVPVGPSARAPIQRAKP 66 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHT--------------TCCEEECCC-------CCSC
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHHc--------------CCeeeeCCCCHHHHhhcccc
Confidence 5999999999999999999999999999999999999987777665 88999888653211 00 11
Q ss_pred cHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECC-Ccch--HHHHHHHcCCceEEEeCchHHHHHHHhchhhhh
Q 012083 96 DEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADV-TFGW--ALQVAAKLELKKASIYTSAPGILAMIMNIPKFI 172 (471)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~-~~~~--~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~ 172 (471)
.....+..+. .....+.++.+.... .+||+||+|. +..+ +..+|+++|||++.+++++....
T Consensus 67 ~~~~~~~~~~---~~~~~~~~~~l~~~~--~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~---------- 131 (415)
T 1iir_A 67 LTAEDVRRFT---TEAIATQFDEIPAAA--EGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVP---------- 131 (415)
T ss_dssp CCHHHHHHHH---HHHHHHHHHHHHHHT--TTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSC----------
T ss_pred cchHHHHHHH---HHHHHHHHHHHHHHh--cCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCC----------
Confidence 1111121221 122333444443212 7999999998 5668 89999999999999987664310
Q ss_pred hhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCC----chhHHH----HHHHHHHhhh------------ccCc
Q 012083 173 EAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPS----LQTLMF----QYINVIRQNI------------EASD 232 (471)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~----~~~~~~----~~~~~~~~~~------------~~~~ 232 (471)
..+. |... ... .++.....+.. ...... ..+.+..... ...
T Consensus 132 -~~~~---------------p~~~-~~~-~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~- 192 (415)
T 1iir_A 132 -SPYY---------------PPPP-LGE-PSTQDTIDIPAQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTD- 192 (415)
T ss_dssp -CSSS---------------CCCC-----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCS-
T ss_pred -Cccc---------------CCcc-CCc-cccchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCccccccCCC-
Confidence 0000 0000 000 00000000000 000000 0111111111 122
Q ss_pred EEEEcchhhhch-hhhhhCCCcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHHH
Q 012083 233 RILCTWFHELAP-SANKILPSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGL 311 (471)
Q Consensus 233 ~~l~~s~~~l~~-~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al 311 (471)
.+++++++.|++ + .+.. ++++|||+..+.. ++.+.++.+|++..+ ++|||++||+. ...+.+..+++++
T Consensus 193 ~~l~~~~~~l~~~~-~~~~-~~~~vG~~~~~~~-----~~~~~~~~~~l~~~~--~~v~v~~Gs~~-~~~~~~~~~~~al 262 (415)
T 1iir_A 193 HPWVAADPVLAPLQ-PTDL-DAVQTGAWILPDE-----RPLSPELAAFLDAGP--PPVYLGFGSLG-APADAVRVAIDAI 262 (415)
T ss_dssp SCEECSCTTTSCCC-CCSS-CCEECCCCCCCCC-----CCCCHHHHHHHHTSS--CCEEEECC----CCHHHHHHHHHHH
T ss_pred CEEEeeChhhcCCC-cccC-CeEeeCCCccCcc-----cCCCHHHHHHHhhCC--CeEEEeCCCCC-CcHHHHHHHHHHH
Confidence 689999999987 4 2222 8999999987532 344567789997653 59999999987 6677788899999
Q ss_pred HhCCCCEEEEEcCCCCCCCCCCCCchhHHhhCCCcEEEeccchhhhhccCcceeeeeccCcchhhHhhhcCCceeecccc
Q 012083 312 ELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWG 391 (471)
Q Consensus 312 ~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~ 391 (471)
++.+.+++|+++... .. . ...++|+++++|+||.++| +++++||||||+||++||+++|+|+|++|..
T Consensus 263 ~~~~~~~v~~~g~~~----~~-~-----~~~~~~v~~~~~~~~~~~l--~~~d~~v~~~G~~t~~Ea~~~G~P~i~~p~~ 330 (415)
T 1iir_A 263 RAHGRRVILSRGWAD----LV-L-----PDDGADCFAIGEVNHQVLF--GRVAAVIHHGGAGTTHVAARAGAPQILLPQM 330 (415)
T ss_dssp HHTTCCEEECTTCTT----CC-C-----SSCGGGEEECSSCCHHHHG--GGSSEEEECCCHHHHHHHHHHTCCEEECCCS
T ss_pred HHCCCeEEEEeCCCc----cc-c-----cCCCCCEEEeCcCChHHHH--hhCCEEEeCCChhHHHHHHHcCCCEEECCCC
Confidence 999999999887541 11 1 1235788999999999999 5566699999999999999999999999999
Q ss_pred cchhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHH
Q 012083 392 HDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKELAQKSVTKEGSSSKNLEYFIKQI 469 (471)
Q Consensus 392 ~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~ 469 (471)
.||..||.++++ +|+|+.++. ..++.++|.++|+++ +|++|++++++++++++. ..+...+.+.|+++
T Consensus 331 ~dQ~~na~~l~~-~g~g~~~~~---~~~~~~~l~~~i~~l-~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~i~~~ 398 (415)
T 1iir_A 331 ADQPYYAGRVAE-LGVGVAHDG---PIPTFDSLSAALATA-LTPETHARATAVAGTIRT-----DGAAVAARLLLDAV 398 (415)
T ss_dssp TTHHHHHHHHHH-HTSEEECSS---SSCCHHHHHHHHHHH-TSHHHHHHHHHHHHHSCS-----CHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHH-CCCcccCCc---CCCCHHHHHHHHHHH-cCHHHHHHHHHHHHHHhh-----cChHHHHHHHHHHH
Confidence 999999999999 799999975 668999999999999 999999999999998854 23344555555544
|
| >3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-42 Score=342.54 Aligned_cols=377 Identities=13% Similarity=0.172 Sum_probs=268.0
Q ss_pred cccccCCCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCC
Q 012083 9 ESESLNKTNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGL 88 (471)
Q Consensus 9 ~~~~m~~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 88 (471)
+.+.| |||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+++. |+.+..++...
T Consensus 16 ~~~~m----~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~~--------------G~~~~~~~~~~ 77 (415)
T 3rsc_A 16 EGRHM----AHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRAA--------------GATVVPYQSEI 77 (415)
T ss_dssp ---CC----CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHT--------------TCEEEECCCST
T ss_pred CcccC----CEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHhc--------------CCEEEeccccc
Confidence 55557 9999999999999999999999999999999999999998888776 89999988655
Q ss_pred CCCCCc-----ccHHHHHHH-HHhhccHHHHHHHHHHhcccCCCCeeEEEEC-CCcchHHHHHHHcCCceEEEeCchHHH
Q 012083 89 EPEDDR-----KDEAKMTRS-ISKVMPGYLEELIQKINQQEEDEKITCVIAD-VTFGWALQVAAKLELKKASIYTSAPGI 161 (471)
Q Consensus 89 ~~~~~~-----~~~~~~~~~-~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D-~~~~~~~~~A~~lgiP~v~~~~~~~~~ 161 (471)
+..... ......+.. +.......++++.+.+++ ++||+||+| ....++..+|+.+|||++.+.+.....
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~ 153 (415)
T 3rsc_A 78 IDADAAEVFGSDDLGVRPHLMYLRENVSVLRATAEALDG----DVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASN 153 (415)
T ss_dssp TTCCHHHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHSS----SCCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred cccccchhhccccHHHHHHHHHHHHHHHHHHHHHHHHhc----cCCCEEEECchhhhHHHHHHHHhCCCEEEEEeccccc
Confidence 433110 011111222 233333344555555555 899999999 777789999999999999987544310
Q ss_pred HHHHhchhhhhhhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhh----------hcc-
Q 012083 162 LAMIMNIPKFIEAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQN----------IEA- 230 (471)
Q Consensus 162 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~- 230 (471)
... ...+..... .....+. ....+.+.+.+.... ...
T Consensus 154 ~~~-~~~~~~~~~----------------~~~~~p~---------------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 201 (415)
T 3rsc_A 154 EHY-SFSQDMVTL----------------AGTIDPL---------------DLPVFRDTLRDLLAEHGLSRSVVDCWNHV 201 (415)
T ss_dssp SSC-CHHHHHHHH----------------HTCCCGG---------------GCHHHHHHHHHHHHHTTCCCCHHHHHTCC
T ss_pred Ccc-ccccccccc----------------cccCChh---------------hHHHHHHHHHHHHHHcCCCCChhhhhcCC
Confidence 000 000000000 0000000 000111111111111 122
Q ss_pred CcEEEEcchhhhchhhhhhCCCcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHH
Q 012083 231 SDRILCTWFHELAPSANKILPSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALG 310 (471)
Q Consensus 231 ~~~~l~~s~~~l~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~a 310 (471)
++..++.+.+.++++...++.+++++||...+.. +..+|....+++++||+++||......+.+..++++
T Consensus 202 ~~~~l~~~~~~~~~~~~~~~~~~~~vGp~~~~~~----------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~a 271 (415)
T 3rsc_A 202 EQLNLVFVPKAFQIAGDTFDDRFVFVGPCFDDRR----------FLGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARA 271 (415)
T ss_dssp CSEEEESSCTTTSTTGGGCCTTEEECCCCCCCCG----------GGCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHH
T ss_pred CCeEEEEcCcccCCCcccCCCceEEeCCCCCCcc----------cCcCccccCCCCCEEEEECCCCCCChHHHHHHHHHH
Confidence 2788889988888875556778999998875431 122555555567899999999977777888899999
Q ss_pred HHhCCCCEEEEEcCCCCCCCCCCCCchhHHhhCCCcEEEeccchhhhhccCcceeeeeccCcchhhHhhhcCCceeeccc
Q 012083 311 LELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPW 390 (471)
Q Consensus 311 l~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~ 390 (471)
+++.+.+++|.++... ..+. .+..++|+++.+|+|+.++|+++++ ||||||+||++|++++|+|+|++|.
T Consensus 272 l~~~~~~~v~~~g~~~-------~~~~-l~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~ 341 (415)
T 3rsc_A 272 FDGQPWHVVMTLGGQV-------DPAA-LGDLPPNVEAHRWVPHVKVLEQATV--CVTHGGMGTLMEALYWGRPLVVVPQ 341 (415)
T ss_dssp HTTSSCEEEEECTTTS-------CGGG-GCCCCTTEEEESCCCHHHHHHHEEE--EEESCCHHHHHHHHHTTCCEEECCC
T ss_pred HhcCCcEEEEEeCCCC-------ChHH-hcCCCCcEEEEecCCHHHHHhhCCE--EEECCcHHHHHHHHHhCCCEEEeCC
Confidence 9988899999887541 0111 1234688999999999999977666 9999999999999999999999999
Q ss_pred ccchhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHH
Q 012083 391 GHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKELAQKSVTKEGSSSKNLEYFIK 467 (471)
Q Consensus 391 ~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~ 467 (471)
..||..||.++++ .|+|..+.. ..++.++|.++|+++|+|++++++++++++.+++ +++....++.+.+
T Consensus 342 ~~~q~~~a~~l~~-~g~g~~~~~---~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~ 410 (415)
T 3rsc_A 342 SFDVQPMARRVDQ-LGLGAVLPG---EKADGDTLLAAVGAVAADPALLARVEAMRGHVRR----AGGAARAADAVEA 410 (415)
T ss_dssp SGGGHHHHHHHHH-HTCEEECCG---GGCCHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH----SCHHHHHHHHHHH
T ss_pred cchHHHHHHHHHH-cCCEEEccc---CCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHh----cCHHHHHHHHHHH
Confidence 9999999999999 699999975 6789999999999999999999999999999987 3444444444433
|
| >1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-42 Score=342.05 Aligned_cols=357 Identities=16% Similarity=0.079 Sum_probs=251.9
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCC-CC--c
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPE-DD--R 94 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~--~ 94 (471)
|||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+.+. |++|++++...... .. .
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~--------------g~~~~~~~~~~~~~~~~~~~ 66 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAEV--------------GVPHVPVGLPQHMMLQEGMP 66 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH--------------TCCEEECSCCGGGCCCTTSC
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHc--------------CCeeeecCCCHHHHHhhccc
Confidence 5999999999999999999999999999999999999888877776 88898887643211 00 0
Q ss_pred ccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECC-Ccch--HHHHHHHcCCceEEEeCchHHHHHHHhchhhh
Q 012083 95 KDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADV-TFGW--ALQVAAKLELKKASIYTSAPGILAMIMNIPKF 171 (471)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~-~~~~--~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~ 171 (471)
......+..+.. ....++++.+.... .+||+||+|. +..+ +..+|+.+|||++.+++++....
T Consensus 67 ~~~~~~~~~~~~---~~~~~~~~~l~~~~--~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~--------- 132 (416)
T 1rrv_A 67 PPPPEEEQRLAA---MTVEMQFDAVPGAA--EGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLA--------- 132 (416)
T ss_dssp CCCHHHHHHHHH---HHHHHHHHHHHHHT--TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSC---------
T ss_pred cchhHHHHHHHH---HHHHHHHHHHHHHh--cCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCC---------
Confidence 111111222211 22344444444222 7999999997 4556 88999999999999887653210
Q ss_pred hhhCCCCCCcccccccccccCC-CCCCCCccccCCCCCCCCCc----hhH----HHHHHHHHHhh------------hcc
Q 012083 172 IEAGIISSDGIVIKNEKIELSP-YLPAASPAEFLWNCPGNPSL----QTL----MFQYINVIRQN------------IEA 230 (471)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~~~~~~~~~----~~~----~~~~~~~~~~~------------~~~ 230 (471)
.. .+| ... +. +.+....+... ... +.....+.... ...
T Consensus 133 --~~---------------~~p~~~~-~~---~~~~r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 191 (416)
T 1rrv_A 133 --SP---------------HLPPAYD-EP---TTPGVTDIRVLWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHG 191 (416)
T ss_dssp --CS---------------SSCCCBC-SC---CCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTC
T ss_pred --Cc---------------ccCCCCC-CC---CCchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCchhhhccC
Confidence 00 011 000 00 00000000000 000 00011111111 122
Q ss_pred CcEEEEcchhhhchhhhhhCCCcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCcccc-CCHHHHHHHHH
Q 012083 231 SDRILCTWFHELAPSANKILPSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISK-LSQQQFNELAL 309 (471)
Q Consensus 231 ~~~~l~~s~~~l~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~-~~~~~~~~~~~ 309 (471)
. .++++++++|+++... . ++++|||+..+.. ++.+.++.+|++..+ ++|||++||+.. ...+.+..+++
T Consensus 192 ~-~~l~~~~~~l~~~~~~-~-~~~~vG~~~~~~~-----~~~~~~~~~~l~~~~--~~v~v~~Gs~~~~~~~~~~~~~~~ 261 (416)
T 1rrv_A 192 E-RPLLAADPVLAPLQPD-V-DAVQTGAWLLSDE-----RPLPPELEAFLAAGS--PPVHIGFGSSSGRGIADAAKVAVE 261 (416)
T ss_dssp S-SCEECSCTTTSCCCSS-C-CCEECCCCCCCCC-----CCCCHHHHHHHHSSS--CCEEECCTTCCSHHHHHHHHHHHH
T ss_pred C-CeEEccCccccCCCCC-C-CeeeECCCccCcc-----CCCCHHHHHHHhcCC--CeEEEecCCCCccChHHHHHHHHH
Confidence 3 6899999999875222 2 8999999987632 234567789987653 599999999754 34566788999
Q ss_pred HHHhCCCCEEEEEcCCCCCCCCCCCCchhHHhhCCCcEEEeccchhhhhccCcceeeeeccCcchhhHhhhcCCceeecc
Q 012083 310 GLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWP 389 (471)
Q Consensus 310 al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P 389 (471)
++++.+.+++|+++.. ... + +..++|+++++|+||.++| +++++||||||+||++||+++|||+|++|
T Consensus 262 al~~~~~~~v~~~g~~----~~~-~-----~~~~~~v~~~~~~~~~~ll--~~~d~~v~~~G~~t~~Ea~~~G~P~i~~p 329 (416)
T 1rrv_A 262 AIRAQGRRVILSRGWT----ELV-L-----PDDRDDCFAIDEVNFQALF--RRVAAVIHHGSAGTEHVATRAGVPQLVIP 329 (416)
T ss_dssp HHHHTTCCEEEECTTT----TCC-C-----SCCCTTEEEESSCCHHHHG--GGSSEEEECCCHHHHHHHHHHTCCEEECC
T ss_pred HHHHCCCeEEEEeCCc----ccc-c-----cCCCCCEEEeccCChHHHh--ccCCEEEecCChhHHHHHHHcCCCEEEcc
Confidence 9999999999998764 111 1 1246789999999999999 55556999999999999999999999999
Q ss_pred cccchhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Q 012083 390 WGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKELAQK 450 (471)
Q Consensus 390 ~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~ 450 (471)
+..||..||.++++ +|+|+.+.. ..++.++|.++|+++ +|++|+++++++++++++
T Consensus 330 ~~~dQ~~na~~l~~-~g~g~~~~~---~~~~~~~l~~~i~~l-~~~~~~~~~~~~~~~~~~ 385 (416)
T 1rrv_A 330 RNTDQPYFAGRVAA-LGIGVAHDG---PTPTFESLSAALTTV-LAPETRARAEAVAGMVLT 385 (416)
T ss_dssp CSBTHHHHHHHHHH-HTSEEECSS---SCCCHHHHHHHHHHH-TSHHHHHHHHHHTTTCCC
T ss_pred CCCCcHHHHHHHHH-CCCccCCCC---CCCCHHHHHHHHHHh-hCHHHHHHHHHHHHHHhh
Confidence 99999999999999 799999974 568999999999999 999999999999998864
|
| >3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-40 Score=330.16 Aligned_cols=370 Identities=16% Similarity=0.221 Sum_probs=265.0
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCC-----
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPED----- 92 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~----- 92 (471)
+||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+++. |+.+..++...+...
T Consensus 5 ~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~--------------G~~~~~~~~~~~~~~~~~~~ 70 (402)
T 3ia7_A 5 RHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKAA--------------GAEVVLYKSEFDTFHVPEVV 70 (402)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHT--------------TCEEEECCCGGGTSSSSSSS
T ss_pred CEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHHc--------------CCEEEecccccccccccccc
Confidence 6999999999999999999999999999999999998888888766 899998875433221
Q ss_pred CcccHHHHHHH-HHhhccHHHHHHHHHHhcccCCCCeeEEEEC-CCcchHHHHHHHcCCceEEEeCchHHHHHHHhchhh
Q 012083 93 DRKDEAKMTRS-ISKVMPGYLEELIQKINQQEEDEKITCVIAD-VTFGWALQVAAKLELKKASIYTSAPGILAMIMNIPK 170 (471)
Q Consensus 93 ~~~~~~~~~~~-~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D-~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~ 170 (471)
...+....+.. +.......+.++.+.+++ ++||+||+| ....++..+|+.+|||++.+.+........ ...+.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~-~~~~~ 145 (402)
T 3ia7_A 71 KQEDAETQLHLVYVRENVAILRAAEEALGD----NPPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEHY-SLFKE 145 (402)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHHHHHHHTT----CCCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTTB-CHHHH
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHhc----cCCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCccc-ccccc
Confidence 12233333333 444444445555555555 899999999 777789999999999999987544321000 00000
Q ss_pred hhhhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhh----------hcc-CcEEEEcch
Q 012083 171 FIEAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQN----------IEA-SDRILCTWF 239 (471)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~-~~~~l~~s~ 239 (471)
..... ....+. ....+...+.+.... ... .+..++.+.
T Consensus 146 ~~~~~----------------~~~~~~---------------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~ 194 (402)
T 3ia7_A 146 LWKSN----------------GQRHPA---------------DVEAVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLP 194 (402)
T ss_dssp HHHHH----------------TCCCGG---------------GSHHHHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSC
T ss_pred ccccc----------------cccChh---------------hHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcC
Confidence 00000 000000 000011111111111 112 277888888
Q ss_pred hhhchhhhhhCCCcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHHHHhCCCCEE
Q 012083 240 HELAPSANKILPSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELAGQPFL 319 (471)
Q Consensus 240 ~~l~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i 319 (471)
++++++...+..+++++||...... +...|....+++++||+++||......+.+..+++++++.+.+++
T Consensus 195 ~~~~~~~~~~~~~~~~vGp~~~~~~----------~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (402)
T 3ia7_A 195 KSFQPFAETFDERFAFVGPTLTGRD----------GQPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVV 264 (402)
T ss_dssp GGGSTTGGGCCTTEEECCCCCCC--------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEE
T ss_pred hHhCCccccCCCCeEEeCCCCCCcc----------cCCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEE
Confidence 8888774555778999998865432 112455555567899999999987777788999999998888899
Q ss_pred EEEcCCCCCCCCCCCCchhHHhhCCCcEEEeccchhhhhccCcceeeeeccCcchhhHhhhcCCceeeccc-ccchhhhH
Q 012083 320 CGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPW-GHDHLYIK 398 (471)
Q Consensus 320 ~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~-~~DQ~~na 398 (471)
|.+++.. ..+. .+..++|+++.+|+|+.++|+++++ ||||||+||++|++++|+|+|++|. ..||..||
T Consensus 265 ~~~g~~~-------~~~~-~~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a 334 (402)
T 3ia7_A 265 MAIGGFL-------DPAV-LGPLPPNVEAHQWIPFHSVLAHARA--CLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSA 334 (402)
T ss_dssp EECCTTS-------CGGG-GCSCCTTEEEESCCCHHHHHTTEEE--EEECCCHHHHHHHHHTTCCEEECGGGCGGGHHHH
T ss_pred EEeCCcC-------Chhh-hCCCCCcEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCCcccHHHHH
Confidence 8887541 1111 1224789999999999999977665 9999999999999999999999999 99999999
Q ss_pred HHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHhhcCCChHHHHHHH
Q 012083 399 SCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKELAQKSVTKEGSSSKNLEYF 465 (471)
Q Consensus 399 ~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~ 465 (471)
.++++ .|+|..+.. ..++.+.|.++++++|+|++++++++++++++.+ +++.....+.+
T Consensus 335 ~~~~~-~g~g~~~~~---~~~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i 393 (402)
T 3ia7_A 335 ERVIE-LGLGSVLRP---DQLEPASIREAVERLAADSAVRERVRRMQRDILS----SGGPARAADEV 393 (402)
T ss_dssp HHHHH-TTSEEECCG---GGCSHHHHHHHHHHHHHCHHHHHHHHHHHHHHHT----SCHHHHHHHHH
T ss_pred HHHHH-cCCEEEccC---CCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHhh----CChHHHHHHHH
Confidence 99999 699999975 6789999999999999999999999999999876 34444444433
|
| >3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-41 Score=330.84 Aligned_cols=350 Identities=17% Similarity=0.151 Sum_probs=246.7
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCC--CCcc
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPE--DDRK 95 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~--~~~~ 95 (471)
|||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+++. |+.|.+++...... ....
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~~~--------------g~~~~~l~~~~~~~~~~~~~ 66 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAEV--------------GVPMVPVGRAVRAGAREPGE 66 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHHHT--------------TCCEEECSSCSSGGGSCTTC
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHc--------------CCceeecCCCHHHHhccccC
Confidence 5999999999999999999999999999999999999998888877 88999887543211 0000
Q ss_pred cHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchH---HHHHHHcCCceEEEeCchHHHHHHHhchhhhh
Q 012083 96 DEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWA---LQVAAKLELKKASIYTSAPGILAMIMNIPKFI 172 (471)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~---~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~ 172 (471)
........+... +.+.++.+.... .+||+||+|.....+ ..+|+.+|||++.+..++.......++ ...
T Consensus 67 ~~~~~~~~~~~~----~~~~~~~l~~~~--~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~~~~--~~~ 138 (404)
T 3h4t_A 67 LPPGAAEVVTEV----VAEWFDKVPAAI--EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSEQSQ--AER 138 (404)
T ss_dssp CCTTCGGGHHHH----HHHHHHHHHHHH--TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGGSCH--HHH
T ss_pred CHHHHHHHHHHH----HHHHHHHHHHHh--cCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCChhHH--HHH
Confidence 000111111111 222222222222 479999998665533 789999999999988776531000000 000
Q ss_pred hhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhh-----------ccCcEEEEcchhh
Q 012083 173 EAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNI-----------EASDRILCTWFHE 241 (471)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~s~~~ 241 (471)
. +. .....+.+.+.+.+....+ ...+..+++..+.
T Consensus 139 ~-----------------------------~~-----~~~~~~~~~~~~~~~~~~lgl~~~~~~~~~~~~~~~l~~~~~~ 184 (404)
T 3h4t_A 139 D-----------------------------MY-----NQGADRLFGDAVNSHRASIGLPPVEHLYDYGYTDQPWLAADPV 184 (404)
T ss_dssp H-----------------------------HH-----HHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTT
T ss_pred H-----------------------------HH-----HHHHHHHhHHHHHHHHHHcCCCCCcchhhccccCCeEEeeCcc
Confidence 0 00 0000000000011100000 0123346677777
Q ss_pred hchhhhhhCCCcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHHHHhCCCCEEEE
Q 012083 242 LAPSANKILPSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELAGQPFLCG 321 (471)
Q Consensus 242 l~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~ 321 (471)
+.+. .++.++++++|++..+.. .+.+.++.+|++.. +++|||++||+.. ..+.+..+++++++.+.++||+
T Consensus 185 l~p~-~~~~~~~~~~G~~~~~~~-----~~~~~~l~~~l~~~--~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~~~vv~~ 255 (404)
T 3h4t_A 185 LSPL-RPTDLGTVQTGAWILPDQ-----RPLSAELEGFLRAG--SPPVYVGFGSGPA-PAEAARVAIEAVRAQGRRVVLS 255 (404)
T ss_dssp TSCC-CTTCCSCCBCCCCCCCCC-----CCCCHHHHHHHHTS--SCCEEECCTTSCC-CTTHHHHHHHHHHHTTCCEEEE
T ss_pred eeCC-CCCCCCeEEeCccccCCC-----CCCCHHHHHHHhcC--CCeEEEECCCCCC-cHHHHHHHHHHHHhCCCEEEEE
Confidence 7665 456778999998865532 24456777888754 4699999999876 6778889999999999999999
Q ss_pred EcCCCCCCCCCCCCchhHHhhCCCcEEEeccchhhhhccCcceeeeeccCcchhhHhhhcCCceeecccccchhhhHHHH
Q 012083 322 VRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCI 401 (471)
Q Consensus 322 ~~~~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v 401 (471)
++.. ....+ ..++|+++++|+||.++|.+ +++||||||+||+.|++++|+|+|++|+..||+.||.++
T Consensus 256 ~g~~----~~~~~------~~~~~v~~~~~~~~~~ll~~--~d~~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~ 323 (404)
T 3h4t_A 256 SGWA----GLGRI------DEGDDCLVVGEVNHQVLFGR--VAAVVHHGGAGTTTAVTRAGAPQVVVPQKADQPYYAGRV 323 (404)
T ss_dssp CTTT----TCCCS------SCCTTEEEESSCCHHHHGGG--SSEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHH
T ss_pred eCCc----ccccc------cCCCCEEEecCCCHHHHHhh--CcEEEECCcHHHHHHHHHcCCCEEEcCCcccHHHHHHHH
Confidence 8754 11111 12688999999999999955 555999999999999999999999999999999999999
Q ss_pred HhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHHHH
Q 012083 402 CDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKELAQ 449 (471)
Q Consensus 402 ~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~ 449 (471)
++ .|+|..+.. ..++.++|.++|+++|+ ++|+++++++++.++
T Consensus 324 ~~-~G~g~~l~~---~~~~~~~l~~ai~~ll~-~~~~~~~~~~~~~~~ 366 (404)
T 3h4t_A 324 AD-LGVGVAHDG---PTPTVESLSAALATALT-PGIRARAAAVAGTIR 366 (404)
T ss_dssp HH-HTSEEECSS---SSCCHHHHHHHHHHHTS-HHHHHHHHHHHTTCC
T ss_pred HH-CCCEeccCc---CCCCHHHHHHHHHHHhC-HHHHHHHHHHHHHHh
Confidence 99 799999975 67899999999999999 999999999998874
|
| >2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-40 Score=330.86 Aligned_cols=354 Identities=16% Similarity=0.151 Sum_probs=240.2
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCC-----
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPED----- 92 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~----- 92 (471)
|||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+++. |++|++++...+..+
T Consensus 21 mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~~~--------------G~~~~~i~~~~~~~~~~~~~ 86 (441)
T 2yjn_A 21 MRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITAA--------------GLTAVPVGTDVDLVDFMTHA 86 (441)
T ss_dssp CEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHHTT--------------TCCEEECSCCCCHHHHHHHT
T ss_pred cEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHHHhC--------------CCceeecCCccchHHHhhhh
Confidence 8999999999999999999999999999999999999887777665 899999876531000
Q ss_pred -----------C-----cc--cHH---HHHHHHHhh----c-cH-HHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHH
Q 012083 93 -----------D-----RK--DEA---KMTRSISKV----M-PG-YLEELIQKINQQEEDEKITCVIADVTFGWALQVAA 145 (471)
Q Consensus 93 -----------~-----~~--~~~---~~~~~~~~~----~-~~-~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~ 145 (471)
+ .. ... .....+... . .. .++++++.+++ ++||+||+|..+.++..+|+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~pDlVv~d~~~~~~~~aA~ 162 (441)
T 2yjn_A 87 GHDIIDYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRK----WRPDLVIWEPLTFAAPIAAA 162 (441)
T ss_dssp THHHHHHHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHH----HCCSEEEECTTCTHHHHHHH
T ss_pred hcccccccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHh----cCCCEEEecCcchhHHHHHH
Confidence 0 10 110 111112111 1 12 56666665555 89999999998788999999
Q ss_pred HcCCceEEEeCchHHHHHHHhchhhhhhhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHH
Q 012083 146 KLELKKASIYTSAPGILAMIMNIPKFIEAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIR 225 (471)
Q Consensus 146 ~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (471)
.+|||++.+...+............ ..+ ..+.. .. ...+.+.+.+..
T Consensus 163 ~lgiP~v~~~~~~~~~~~~~~~~~~--~~~---------------~~~~~-----------~~-----~~~~~~~l~~~~ 209 (441)
T 2yjn_A 163 VTGTPHARLLWGPDITTRARQNFLG--LLP---------------DQPEE-----------HR-----EDPLAEWLTWTL 209 (441)
T ss_dssp HHTCCEEEECSSCCHHHHHHHHHHH--HGG---------------GSCTT-----------TC-----CCHHHHHHHHHH
T ss_pred HcCCCEEEEecCCCcchhhhhhhhh--hcc---------------ccccc-----------cc-----cchHHHHHHHHH
Confidence 9999999996554332111100000 000 00000 00 011112222222
Q ss_pred hhhc---------cCcEEEEcchhhhchhhhhhC-CCcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCc
Q 012083 226 QNIE---------ASDRILCTWFHELAPSANKIL-PSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGS 295 (471)
Q Consensus 226 ~~~~---------~~~~~l~~s~~~l~~~~~~~~-~~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS 295 (471)
..+. ..+.++..+.+.++++ ..++ ..+++++ .. .+.++.+|++..+++++|||++||
T Consensus 210 ~~~g~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~---~~---------~~~~~~~~l~~~~~~~~v~v~~Gs 276 (441)
T 2yjn_A 210 EKYGGPAFDEEVVVGQWTIDPAPAAIRLD-TGLKTVGMRYVD---YN---------GPSVVPEWLHDEPERRRVCLTLGI 276 (441)
T ss_dssp HHTTCCCCCGGGTSCSSEEECSCGGGSCC-CCCCEEECCCCC---CC---------SSCCCCGGGSSCCSSCEEEEEC--
T ss_pred HHcCCCCCCccccCCCeEEEecCccccCC-CCCCCCceeeeC---CC---------CCcccchHhhcCCCCCEEEEECCC
Confidence 2111 2455666666666542 2221 1222221 11 122345888876667899999999
Q ss_pred cccC---CHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCCchhHHhhCCCcEEEeccchhhhhccCcceeeeeccCc
Q 012083 296 ISKL---SQQQFNELALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGW 372 (471)
Q Consensus 296 ~~~~---~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~ItHgG~ 372 (471)
+... ..+.+..+++++++.+.+++|++++. ....+. ..++|+++++|+||.++|+ .+++||||||+
T Consensus 277 ~~~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~----~~~~l~-----~~~~~v~~~~~~~~~~ll~--~ad~~V~~~G~ 345 (441)
T 2yjn_A 277 SSRENSIGQVSIEELLGAVGDVDAEIIATFDAQ----QLEGVA-----NIPDNVRTVGFVPMHALLP--TCAATVHHGGP 345 (441)
T ss_dssp --------CCSTTTTHHHHHTSSSEEEECCCTT----TTSSCS-----SCCSSEEECCSCCHHHHGG--GCSEEEECCCH
T ss_pred CcccccChHHHHHHHHHHHHcCCCEEEEEECCc----chhhhc-----cCCCCEEEecCCCHHHHHh--hCCEEEECCCH
Confidence 8653 33456778899998899999988754 111221 2367899999999999995 45559999999
Q ss_pred chhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Q 012083 373 NSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKELAQK 450 (471)
Q Consensus 373 ~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~ 450 (471)
||++|++++|+|+|++|+..||..||.++++ .|+|+.+.. ..++.++|.++|+++|+|++++++++++++++++
T Consensus 346 ~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~-~g~g~~~~~---~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~ 419 (441)
T 2yjn_A 346 GSWHTAAIHGVPQVILPDGWDTGVRAQRTQE-FGAGIALPV---PELTPDQLRESVKRVLDDPAHRAGAARMRDDMLA 419 (441)
T ss_dssp HHHHHHHHTTCCEEECCCSHHHHHHHHHHHH-HTSEEECCT---TTCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhCCCEEEeCCcccHHHHHHHHHH-cCCEEEccc---ccCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHc
Confidence 9999999999999999999999999999999 699999975 6789999999999999999999999999999876
|
| >2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-39 Score=322.07 Aligned_cols=360 Identities=14% Similarity=0.174 Sum_probs=253.4
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCC----
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDD---- 93 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~---- 93 (471)
|||+|++.++.||++|+++|+++|+++||+|+++++....+.+.+. |++++.++...+....
T Consensus 8 ~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~~~--------------g~~~~~~~~~~~~~~~~~~~ 73 (430)
T 2iyf_A 8 AHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAAT--------------GPRPVLYHSTLPGPDADPEA 73 (430)
T ss_dssp CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHTT--------------SCEEEECCCCSCCTTSCGGG
T ss_pred ceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHHhC--------------CCEEEEcCCcCccccccccc
Confidence 7999999999999999999999999999999999999887666554 8899988865432211
Q ss_pred -cccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEEEeCchHHHHHHHhchhhhh
Q 012083 94 -RKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKASIYTSAPGILAMIMNIPKFI 172 (471)
Q Consensus 94 -~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~ 172 (471)
..+....+..+.......+..+.+.+++ .+||+||+|....++..+|+.+|||++.+++........ ...+.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~-~~~~~-- 146 (430)
T 2iyf_A 74 WGSTLLDNVEPFLNDAIQALPQLADAYAD----DIPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGY-EEEVA-- 146 (430)
T ss_dssp GCSSHHHHHHHHHHHHHHHHHHHHHHHTT----SCCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTH-HHHTH--
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHhhc----cCCCEEEECCccHHHHHHHHHcCCCEEEEeccccccccc-ccccc--
Confidence 1233333333333233334455555544 899999999877788999999999999998654310000 00000
Q ss_pred hhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHh----------hhccCcEEEEcchhhh
Q 012083 173 EAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQ----------NIEASDRILCTWFHEL 242 (471)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~s~~~l 242 (471)
.. .. ......++ ...+...+.+... ....++.+++++.+.+
T Consensus 147 -~~------~~---~~~~~~~~-------------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~ 197 (430)
T 2iyf_A 147 -EP------MW---REPRQTER-------------------GRAYYARFEAWLKENGITEHPDTFASHPPRSLVLIPKAL 197 (430)
T ss_dssp -HH------HH---HHHHHSHH-------------------HHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGG
T ss_pred -cc------hh---hhhccchH-------------------HHHHHHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHh
Confidence 00 00 00000000 0000001111111 1125788999999999
Q ss_pred chhhhhhCCC-cceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHHHHhC-CCCEEE
Q 012083 243 APSANKILPS-IIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELA-GQPFLC 320 (471)
Q Consensus 243 ~~~~~~~~~~-~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~-~~~~i~ 320 (471)
+++...++++ +++|||...... . ..+|....+++++||+++||+.....+.+..+++++++. +.+++|
T Consensus 198 ~~~~~~~~~~~v~~vG~~~~~~~---~-------~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~~~~~ 267 (430)
T 2iyf_A 198 QPHADRVDEDVYTFVGACQGDRA---E-------EGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGWHLVL 267 (430)
T ss_dssp STTGGGSCTTTEEECCCCC---------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTTEEEEE
T ss_pred CCCcccCCCccEEEeCCcCCCCC---C-------CCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCCeEEEE
Confidence 8764455667 999998654321 0 124555445577999999998855677788899999885 778888
Q ss_pred EEcCCCCCCCCCCCCchhHHhhCCCcEEEeccchhhhhccCcceeeeeccCcchhhHhhhcCCceeecccccchhhhHHH
Q 012083 321 GVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSC 400 (471)
Q Consensus 321 ~~~~~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~ 400 (471)
.++... ..+.+ +..++|+.+.+|+||.++|+++++ ||||||+||++||+++|+|+|++|...||..||.+
T Consensus 268 ~~G~~~-------~~~~l-~~~~~~v~~~~~~~~~~~l~~ad~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~ 337 (430)
T 2iyf_A 268 QIGRKV-------TPAEL-GELPDNVEVHDWVPQLAILRQADL--FVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADM 337 (430)
T ss_dssp ECC----------CGGGG-CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHH
T ss_pred EeCCCC-------ChHHh-ccCCCCeEEEecCCHHHHhhccCE--EEECCCccHHHHHHHhCCCEEECCCccchHHHHHH
Confidence 887541 01111 124678999999999999988777 99999999999999999999999999999999999
Q ss_pred HHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHH
Q 012083 401 ICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKELAQKS 451 (471)
Q Consensus 401 v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~~ 451 (471)
+++ .|+|+.+.. ..++.++|.++|+++++|++++++++++++++++.
T Consensus 338 ~~~-~g~g~~~~~---~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~ 384 (430)
T 2iyf_A 338 LQG-LGVARKLAT---EEATADLLRETALALVDDPEVARRLRRIQAEMAQE 384 (430)
T ss_dssp HHH-TTSEEECCC---C-CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred HHH-cCCEEEcCC---CCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhc
Confidence 999 699999974 56799999999999999999999999999998764
|
| >2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-39 Score=315.92 Aligned_cols=348 Identities=15% Similarity=0.116 Sum_probs=247.5
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCC--------
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLE-------- 89 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-------- 89 (471)
|||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+... |+.++.++....
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~--------------g~~~~~~~~~~~~~~~~~~~ 66 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVTGV--------------GLPAVATTDLPIRHFITTDR 66 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHT--------------TCCEEESCSSCHHHHHHBCT
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHHhC--------------CCEEEEeCCcchHHHHhhhc
Confidence 5999999999999999999999999999999999998877666655 888888875420
Q ss_pred ----CCCCcc-cHHHHH-HH-HHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEEEeCchHHHH
Q 012083 90 ----PEDDRK-DEAKMT-RS-ISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKASIYTSAPGIL 162 (471)
Q Consensus 90 ----~~~~~~-~~~~~~-~~-~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~ 162 (471)
...... .....+ .. +.......++++.+.+++ .+||+||+|....++..+|+.+|||++.++..+..
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~-- 140 (384)
T 2p6p_A 67 EGRPEAIPSDPVAQARFTGRWFARMAASSLPRMLDFSRA----WRPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVD-- 140 (384)
T ss_dssp TSCBCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCC--
T ss_pred ccCccccCcchHHHHHHHHHHHHhhHHHHHHHHHHHHhc----cCCcEEEECcchhhHHHHHHhcCCCEEEeccCCcc--
Confidence 000010 111111 21 111222334445444444 89999999988778889999999999987632110
Q ss_pred HHHhchhhhhhhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhh-----ccCcEEEEc
Q 012083 163 AMIMNIPKFIEAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNI-----EASDRILCT 237 (471)
Q Consensus 163 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~ 237 (471)
..++ ...+...+.+..... ..++.++++
T Consensus 141 -----------------------------~~~~------------------~~~~~~~~~~~~~~~g~~~~~~~~~~l~~ 173 (384)
T 2p6p_A 141 -----------------------------ADGI------------------HPGADAELRPELSELGLERLPAPDLFIDI 173 (384)
T ss_dssp -----------------------------CTTT------------------HHHHHHHTHHHHHHTTCSSCCCCSEEEEC
T ss_pred -----------------------------cchh------------------hHHHHHHHHHHHHHcCCCCCCCCCeEEEE
Confidence 0000 000111111111111 126789999
Q ss_pred chhhhchhhhhhC-CCcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccC-----CHHHHHHHHHHH
Q 012083 238 WFHELAPSANKIL-PSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKL-----SQQQFNELALGL 311 (471)
Q Consensus 238 s~~~l~~~~~~~~-~~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~-----~~~~~~~~~~al 311 (471)
+.+.++++ .+++ .++.+++. . .+.++.+|++..+++++||+++||+... +.+.+..+++++
T Consensus 174 ~~~~~~~~-~~~~~~~~~~~~~---~---------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al 240 (384)
T 2p6p_A 174 CPPSLRPA-NAAPARMMRHVAT---S---------RQCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDL 240 (384)
T ss_dssp SCGGGSCT-TSCCCEECCCCCC---C---------CCCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHH
T ss_pred CCHHHCCC-CCCCCCceEecCC---C---------CCCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHH
Confidence 99988765 2322 23444421 1 1123457887655567999999998654 456788899999
Q ss_pred HhCCCCEEEEEcCCCCCCCCCCCCchhHHhhCCCcEEEeccchhhhhccCcceeeeeccCcchhhHhhhcCCceeecccc
Q 012083 312 ELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWG 391 (471)
Q Consensus 312 ~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~ 391 (471)
++.+.+++|++++. ..+.+ +..++|+.+ +|+||.++|++++ +||||||+||++||+++|+|+|++|..
T Consensus 241 ~~~~~~~~~~~g~~--------~~~~l-~~~~~~v~~-~~~~~~~~l~~~d--~~v~~~G~~t~~Ea~~~G~P~v~~p~~ 308 (384)
T 2p6p_A 241 VRWDVELIVAAPDT--------VAEAL-RAEVPQARV-GWTPLDVVAPTCD--LLVHHAGGVSTLTGLSAGVPQLLIPKG 308 (384)
T ss_dssp HTTTCEEEEECCHH--------HHHHH-HHHCTTSEE-ECCCHHHHGGGCS--EEEECSCTTHHHHHHHTTCCEEECCCS
T ss_pred hcCCcEEEEEeCCC--------CHHhh-CCCCCceEE-cCCCHHHHHhhCC--EEEeCCcHHHHHHHHHhCCCEEEccCc
Confidence 98999999987632 01111 235789999 9999999995555 599999999999999999999999999
Q ss_pred cchhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHhhcCCChHHHHHHH
Q 012083 392 HDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKELAQKSVTKEGSSSKNLEYF 465 (471)
Q Consensus 392 ~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~ 465 (471)
.||..||.++++ .|+|+.+.. ..++.++|.++|+++|+|++++++++++++++++. .+..+.++.+
T Consensus 309 ~dq~~~a~~~~~-~g~g~~~~~---~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~----~~~~~~~~~i 374 (384)
T 2p6p_A 309 SVLEAPARRVAD-YGAAIALLP---GEDSTEAIADSCQELQAKDTYARRAQDLSREISGM----PLPATVVTAL 374 (384)
T ss_dssp HHHHHHHHHHHH-HTSEEECCT---TCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTS----CCHHHHHHHH
T ss_pred ccchHHHHHHHH-CCCeEecCc---CCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhC----CCHHHHHHHH
Confidence 999999999999 699999874 56799999999999999999999999999999873 4444444433
|
| >3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-37 Score=307.94 Aligned_cols=350 Identities=14% Similarity=0.135 Sum_probs=239.0
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCC-------
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLE------- 89 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~------- 89 (471)
.|||+|++.++.||++|+++||++|+++||+|+++++ .+.+.++.. |+.+..++....
T Consensus 20 ~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~~~--------------G~~~~~~~~~~~~~~~~~~ 84 (398)
T 3oti_A 20 HMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAAAA--------------GLEVVDVAPDYSAVKVFEQ 84 (398)
T ss_dssp CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHHTT--------------TCEEEESSTTCCHHHHHHH
T ss_pred cCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHHhC--------------CCeeEecCCccCHHHHhhh
Confidence 3899999999999999999999999999999999999 777777765 899999875321
Q ss_pred ---------------CCCCcccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEEE
Q 012083 90 ---------------PEDDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKASI 154 (471)
Q Consensus 90 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~~ 154 (471)
...........+..........+.+++++ ++||+||+|....++..+|+.+|||++.+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------~~pDlVv~d~~~~~~~~aA~~~giP~v~~ 157 (398)
T 3oti_A 85 VAKDNPRFAETVATRPAIDLEEWGVQIAAVNRPLVDGTMALVDD-------YRPDLVVYEQGATVGLLAADRAGVPAVQR 157 (398)
T ss_dssp HHHHCHHHHHTGGGSCCCSGGGGHHHHHHHHGGGHHHHHHHHHH-------HCCSEEEEETTCHHHHHHHHHHTCCEEEE
T ss_pred cccCCccccccccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHH-------cCCCEEEECchhhHHHHHHHHcCCCEEEE
Confidence 11111122222233333333334444444 89999999988888999999999999987
Q ss_pred eCchHHHHHHHhchhhhhhhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEE
Q 012083 155 YTSAPGILAMIMNIPKFIEAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRI 234 (471)
Q Consensus 155 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (471)
........ . ..... ...+.....+..-.....+..
T Consensus 158 ~~~~~~~~-------------------------------~-----~~~~~---------~~~l~~~~~~~~~~~~~~~~~ 192 (398)
T 3oti_A 158 NQSAWRTR-------------------------------G-----MHRSI---------ASFLTDLMDKHQVSLPEPVAT 192 (398)
T ss_dssp CCTTCCCT-------------------------------T-----HHHHH---------HTTCHHHHHHTTCCCCCCSEE
T ss_pred eccCCCcc-------------------------------c-----hhhHH---------HHHHHHHHHHcCCCCCCCCeE
Confidence 53321000 0 00000 000011111100001233555
Q ss_pred EEcchhhhchhhhhhCCCcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccC--CHHHHHHHHHHHH
Q 012083 235 LCTWFHELAPSANKILPSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKL--SQQQFNELALGLE 312 (471)
Q Consensus 235 l~~s~~~l~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~--~~~~~~~~~~al~ 312 (471)
+....+.+..+.......+.++. . .....+.+|+...+++++||+++||.... ..+.+..++++++
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~-~-----------~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~ 260 (398)
T 3oti_A 193 IESFPPSLLLEAEPEGWFMRWVP-Y-----------GGGAVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAG 260 (398)
T ss_dssp ECSSCGGGGTTSCCCSBCCCCCC-C-----------CCCEECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHH
T ss_pred EEeCCHHHCCCCCCCCCCccccC-C-----------CCCcCCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHH
Confidence 65555555433101111112210 0 11223346776666678999999998442 5566888999999
Q ss_pred hCCCCEEEEEcCCCCCCCCCCCCchhHHhhCCCcEEEeccchhhhhccCcceeeeeccCcchhhHhhhcCCceeeccccc
Q 012083 313 LAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGH 392 (471)
Q Consensus 313 ~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~ 392 (471)
+.+.+++|+.++. . .+. .+..++|+++.+|+|+.++|+++++ ||||||.||++||+++|+|+|++|...
T Consensus 261 ~~~~~~v~~~g~~----~----~~~-l~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Eal~~G~P~v~~p~~~ 329 (398)
T 3oti_A 261 EVDADFVLALGDL----D----ISP-LGTLPRNVRAVGWTPLHTLLRTCTA--VVHHGGGGTVMTAIDAGIPQLLAPDPR 329 (398)
T ss_dssp TSSSEEEEECTTS----C----CGG-GCSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCCTT
T ss_pred cCCCEEEEEECCc----C----hhh-hccCCCcEEEEccCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEcCCCc
Confidence 8999999988764 1 111 1134789999999999999977665 999999999999999999999999999
Q ss_pred chhhhH--HHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHH
Q 012083 393 DHLYIK--SCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKELAQKSVTKEGSSSKNLEYFIKQI 469 (471)
Q Consensus 393 DQ~~na--~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~ 469 (471)
||..|| .++++ .|+|+.++. ...+.+.|. ++|+|++++++++++++++++. . +...+...++++
T Consensus 330 dq~~~a~~~~~~~-~g~g~~~~~---~~~~~~~l~----~ll~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~l~~l 395 (398)
T 3oti_A 330 DQFQHTAREAVSR-RGIGLVSTS---DKVDADLLR----RLIGDESLRTAAREVREEMVAL----P-TPAETVRRIVER 395 (398)
T ss_dssp CCSSCTTHHHHHH-HTSEEECCG---GGCCHHHHH----HHHHCHHHHHHHHHHHHHHHTS----C-CHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHH-CCCEEeeCC---CCCCHHHHH----HHHcCHHHHHHHHHHHHHHHhC----C-CHHHHHHHHHHH
Confidence 999999 99999 699999975 556777666 8899999999999999999763 3 344555555544
|
| >4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-38 Score=309.35 Aligned_cols=341 Identities=13% Similarity=0.070 Sum_probs=224.8
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCC------
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEP------ 90 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~------ 90 (471)
+|||+|++.++.||++|+++|+++|+++||+|++++++.+.+.+.+. |+.+..++.....
T Consensus 15 ~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~--------------G~~~~~~~~~~~~~~~~~~ 80 (398)
T 4fzr_A 15 HMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTGA--------------GLPFAPTCPSLDMPEVLSW 80 (398)
T ss_dssp CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHHT--------------TCCEEEEESSCCHHHHHSB
T ss_pred ceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHhC--------------CCeeEecCCccchHhhhhh
Confidence 38999999999999999999999999999999999998888888776 7777777532110
Q ss_pred ---C---CCcccH----HHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEEEeCchHH
Q 012083 91 ---E---DDRKDE----AKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKASIYTSAPG 160 (471)
Q Consensus 91 ---~---~~~~~~----~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~ 160 (471)
. ...... ......+.......++++.+.+++ ++||+||+|....++..+|+.+|||++.+......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~ 156 (398)
T 4fzr_A 81 DREGNRTTMPREEKPLLEHIGRGYGRLVLRMRDEALALAER----WKPDLVLTETYSLTGPLVAATLGIPWIEQSIRLAS 156 (398)
T ss_dssp CTTSCBCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCC
T ss_pred hccCcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh----CCCCEEEECccccHHHHHHHhhCCCEEEeccCCCC
Confidence 0 000011 111112222222333444444444 89999999987778999999999999987654321
Q ss_pred HHHHHhchhhhhhhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhh-----hccCcEEE
Q 012083 161 ILAMIMNIPKFIEAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQN-----IEASDRIL 235 (471)
Q Consensus 161 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l 235 (471)
....... ....+.+.... ....+..+
T Consensus 157 ~~~~~~~-------------------------------------------------~~~~l~~~~~~~~~~~~~~~~~~~ 187 (398)
T 4fzr_A 157 PELIKSA-------------------------------------------------GVGELAPELAELGLTDFPDPLLSI 187 (398)
T ss_dssp CHHHHHH-------------------------------------------------HHHHTHHHHHTTTCSSCCCCSEEE
T ss_pred chhhhHH-------------------------------------------------HHHHHHHHHHHcCCCCCCCCCeEE
Confidence 1000000 00000000110 12335556
Q ss_pred EcchhhhchhhhhhCCCcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccC--------CHHHHHHH
Q 012083 236 CTWFHELAPSANKILPSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKL--------SQQQFNEL 307 (471)
Q Consensus 236 ~~s~~~l~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~--------~~~~~~~~ 307 (471)
....+.++.........+.++++.. ...++.+|+...+++++||+++||.... ..+.+..+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~ 256 (398)
T 4fzr_A 188 DVCPPSMEAQPKPGTTKMRYVPYNG-----------RNDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQAL 256 (398)
T ss_dssp ECSCGGGC----CCCEECCCCCCCC-----------SSCCCCHHHHSCCSSCEEECC----------------CCSHHHH
T ss_pred EeCChhhCCCCCCCCCCeeeeCCCC-----------CCCCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHH
Confidence 6666666543111111122332110 1223346776656678999999998543 33457889
Q ss_pred HHHHHhCCCCEEEEEcCCCCCCCCCCCCchhHHhhCCCcEEEeccchhhhhccCcceeeeeccCcchhhHhhhcCCceee
Q 012083 308 ALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLC 387 (471)
Q Consensus 308 ~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~ 387 (471)
++++.+.+.+++|+.++. ....+ +..++|+++.+|+|+.++|+++++ ||||||.||++||+++|+|+|+
T Consensus 257 ~~al~~~~~~~v~~~~~~----~~~~l-----~~~~~~v~~~~~~~~~~ll~~ad~--~v~~gG~~t~~Ea~~~G~P~v~ 325 (398)
T 4fzr_A 257 SQELPKLGFEVVVAVSDK----LAQTL-----QPLPEGVLAAGQFPLSAIMPACDV--VVHHGGHGTTLTCLSEGVPQVS 325 (398)
T ss_dssp HHHGGGGTCEEEECCCC-----------------CCTTEEEESCCCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCEEE
T ss_pred HHHHHhCCCEEEEEeCCc----chhhh-----ccCCCcEEEeCcCCHHHHHhhCCE--EEecCCHHHHHHHHHhCCCEEe
Confidence 999998899999888754 11111 234789999999999999987666 9999999999999999999999
Q ss_pred cccccchhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Q 012083 388 WPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKELAQK 450 (471)
Q Consensus 388 ~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~ 450 (471)
+|...||..||.++++ .|+|+.+.. ..++.++|.++|+++|+|++++++++++++++++
T Consensus 326 ~p~~~~q~~~a~~~~~-~g~g~~~~~---~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~~~~~ 384 (398)
T 4fzr_A 326 VPVIAEVWDSARLLHA-AGAGVEVPW---EQAGVESVLAACARIRDDSSYVGNARRLAAEMAT 384 (398)
T ss_dssp CCCSGGGHHHHHHHHH-TTSEEECC----------CHHHHHHHHHHCTHHHHHHHHHHHHHTT
T ss_pred cCCchhHHHHHHHHHH-cCCEEecCc---ccCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHc
Confidence 9999999999999999 699999975 6678999999999999999999999999999876
|
| >3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-35 Score=293.05 Aligned_cols=355 Identities=12% Similarity=0.146 Sum_probs=238.9
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeC-CCCCCCC----
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPL-PDGLEPE---- 91 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~---- 91 (471)
+|||+|++.++.||++|++.|+++|+++||+|++++++.+.+.+... |+.+..+ +......
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~--------------g~~~~~~~~~~~~~~~~~~ 66 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAHGA--------------GLTTAGIRGNDRTGDTGGT 66 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHHHHB--------------TCEEEEC------------
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHHHhC--------------CCceeeecCCccchhhhhh
Confidence 37999999999999999999999999999999999998887777766 7888877 3221100
Q ss_pred ------C------CcccHHHHHHHHHhhc----cHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEEEe
Q 012083 92 ------D------DRKDEAKMTRSISKVM----PGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKASIY 155 (471)
Q Consensus 92 ------~------~~~~~~~~~~~~~~~~----~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~~~ 155 (471)
. ........+......+ ...++++.+.+++ ++||+||+|...+++..+|+.+|||++.+.
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~PD~Vv~~~~~~~~~~aa~~~giP~v~~~ 142 (391)
T 3tsa_A 67 TQLRFPNPAFGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEA----WRPSVLLVDVCALIGRVLGGLLDLPVVLHR 142 (391)
T ss_dssp --CCSCCGGGGCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HCCSEEEEETTCHHHHHHHHHTTCCEEEEC
T ss_pred hcccccccccccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHh----cCCCEEEeCcchhHHHHHHHHhCCCEEEEe
Confidence 0 0011112222221111 1114444444444 899999999877788889999999999975
Q ss_pred CchHHHHHHHhchhhhhhhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhh-----cc
Q 012083 156 TSAPGILAMIMNIPKFIEAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNI-----EA 230 (471)
Q Consensus 156 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 230 (471)
........ .........+.+....+ ..
T Consensus 143 ~~~~~~~~------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~ 174 (391)
T 3tsa_A 143 WGVDPTAG------------------------------------------------PFSDRAHELLDPVCRHHGLTGLPT 174 (391)
T ss_dssp CSCCCTTT------------------------------------------------HHHHHHHHHHHHHHHHTTSSSSCC
T ss_pred cCCccccc------------------------------------------------cccchHHHHHHHHHHHcCCCCCCC
Confidence 43211000 00001111111111111 22
Q ss_pred CcEEEEcchhhhchhhhhhCCCcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCcccc--CC-HHHHHHH
Q 012083 231 SDRILCTWFHELAPSANKILPSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISK--LS-QQQFNEL 307 (471)
Q Consensus 231 ~~~~l~~s~~~l~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~--~~-~~~~~~~ 307 (471)
.+.++..+.++++.........++++ |. .....+..|+...+++++||+++||... .. .+.+..+
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~-p~-----------~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~ 242 (391)
T 3tsa_A 175 PELILDPCPPSLQASDAPQGAPVQYV-PY-----------NGSGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAV 242 (391)
T ss_dssp CSEEEECSCGGGSCTTSCCCEECCCC-CC-----------CCCEECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHH
T ss_pred CceEEEecChhhcCCCCCccCCeeee-cC-----------CCCcCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHH
Confidence 36667777777665421111123333 11 1122233677766667899999999833 33 6778888
Q ss_pred HHHHHhC-CCCEEEEEcCCCCCCCCCCCCchhHHhhCCCcEEEeccchhhhhccCcceeeeeccCcchhhHhhhcCCcee
Q 012083 308 ALGLELA-GQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFL 386 (471)
Q Consensus 308 ~~al~~~-~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l 386 (471)
+++ ++. +.+++|..++. ..+.+ +..++|+++.+|+|+.++|+++++ ||||||.||++||+++|+|+|
T Consensus 243 ~~~-~~~p~~~~v~~~~~~----~~~~l-----~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v 310 (391)
T 3tsa_A 243 AAA-TELPGVEAVIAVPPE----HRALL-----TDLPDNARIAESVPLNLFLRTCEL--VICAGGSGTAFTATRLGIPQL 310 (391)
T ss_dssp HHH-HTSTTEEEEEECCGG----GGGGC-----TTCCTTEEECCSCCGGGTGGGCSE--EEECCCHHHHHHHHHTTCCEE
T ss_pred HHh-ccCCCeEEEEEECCc----chhhc-----ccCCCCEEEeccCCHHHHHhhCCE--EEeCCCHHHHHHHHHhCCCEE
Confidence 888 877 77888887653 11111 124688999999999999955555 999999999999999999999
Q ss_pred ecccccchhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHH
Q 012083 387 CWPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKELAQKSVTKEGSSSKNLEYFI 466 (471)
Q Consensus 387 ~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~ 466 (471)
++|...||..|+.++++ .|+|..+..+ ....+.+.|.++++++|+|++++++++++++++.+ +.+... +.+.+
T Consensus 311 ~~p~~~~q~~~a~~~~~-~g~g~~~~~~-~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~~~~~----~~~~~~-~~~~i 383 (391)
T 3tsa_A 311 VLPQYFDQFDYARNLAA-AGAGICLPDE-QAQSDHEQFTDSIATVLGDTGFAAAAIKLSDEITA----MPHPAA-LVRTL 383 (391)
T ss_dssp ECCCSTTHHHHHHHHHH-TTSEEECCSH-HHHTCHHHHHHHHHHHHTCTHHHHHHHHHHHHHHT----SCCHHH-HHHHH
T ss_pred ecCCcccHHHHHHHHHH-cCCEEecCcc-cccCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHc----CCCHHH-HHHHH
Confidence 99999999999999999 6999999520 02378999999999999999999999999999876 344444 44444
Q ss_pred HH
Q 012083 467 KQ 468 (471)
Q Consensus 467 ~~ 468 (471)
++
T Consensus 384 ~~ 385 (391)
T 3tsa_A 384 EN 385 (391)
T ss_dssp HH
T ss_pred HH
Confidence 43
|
| >3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-33 Score=279.26 Aligned_cols=345 Identities=17% Similarity=0.201 Sum_probs=239.4
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCC-------
Q 012083 16 TNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGL------- 88 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------- 88 (471)
++|||+|++.++.||++|+++|+++|+++||+|++++++.+.+.+.+. |+.+..++...
T Consensus 19 ~~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~--------------g~~~~~~~~~~~~~~~~~ 84 (412)
T 3otg_A 19 RHMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLRKL--------------GFEPVATGMPVFDGFLAA 84 (412)
T ss_dssp CSCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHT--------------TCEEEECCCCHHHHHHHH
T ss_pred ceeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHHHhc--------------CCceeecCcccccchhhh
Confidence 458999999999999999999999999999999999998876666655 89998887410
Q ss_pred -----CCC-CCcccHH----HHHHHHHhh-ccHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEEEeCc
Q 012083 89 -----EPE-DDRKDEA----KMTRSISKV-MPGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKASIYTS 157 (471)
Q Consensus 89 -----~~~-~~~~~~~----~~~~~~~~~-~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~~~~~ 157 (471)
... ....... .....+... ....+.++.+.+++ .+||+||+|....++..+|+.+|||+|.+...
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~ 160 (412)
T 3otg_A 85 LRIRFDTDSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIER----LRPDLVVQEISNYGAGLAALKAGIPTICHGVG 160 (412)
T ss_dssp HHHHHSCSCCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHH----HCCSEEEEETTCHHHHHHHHHHTCCEEEECCS
T ss_pred hhhhhcccCCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHh----cCCCEEEECchhhHHHHHHHHcCCCEEEeccc
Confidence 000 0000011 111111111 11122333333333 89999999987778888999999999986543
Q ss_pred hHHHHHHHhchhhhhhhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhh----------
Q 012083 158 APGILAMIMNIPKFIEAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQN---------- 227 (471)
Q Consensus 158 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 227 (471)
....... ...+.+.+.+....
T Consensus 161 ~~~~~~~-------------------------------------------------~~~~~~~~~~~~~~~g~~~~~~~~ 191 (412)
T 3otg_A 161 RDTPDDL-------------------------------------------------TRSIEEEVRGLAQRLGLDLPPGRI 191 (412)
T ss_dssp CCCCSHH-------------------------------------------------HHHHHHHHHHHHHHTTCCCCSSCC
T ss_pred ccCchhh-------------------------------------------------hHHHHHHHHHHHHHcCCCCCcccc
Confidence 2210000 00001111111111
Q ss_pred hccCcEEEEcchhhhchhhhhhCCCcceeccccCCCCCCCCCCcCcchhccc-ccCCCCCcEEEEecCccccCCHHHHHH
Q 012083 228 IEASDRILCTWFHELAPSANKILPSIIPVGPLIANGQPTGNFWSEDLTCLSW-LDKQPPGSVIYAAFGSISKLSQQQFNE 306 (471)
Q Consensus 228 ~~~~~~~l~~s~~~l~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~l~~~-l~~~~~~~vv~vs~GS~~~~~~~~~~~ 306 (471)
...++.++..+...++...........++- .... .......+| ....+++++|++++||......+.+..
T Consensus 192 ~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~---~~~~------~~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~ 262 (412)
T 3otg_A 192 DGFGNPFIDIFPPSLQEPEFRARPRRHELR---PVPF------AEQGDLPAWLSSRDTARPLVYLTLGTSSGGTVEVLRA 262 (412)
T ss_dssp GGGGCCEEECSCGGGSCHHHHTCTTEEECC---CCCC------CCCCCCCGGGGGSCTTSCEEEEECTTTTCSCHHHHHH
T ss_pred cCCCCeEEeeCCHHhcCCcccCCCCcceee---ccCC------CCCCCCCCccccccCCCCEEEEEcCCCCcCcHHHHHH
Confidence 135677787777777654222111111111 1111 111223355 333345679999999987667788889
Q ss_pred HHHHHHhCCCCEEEEEcCCCCCCCCCCCCchhHHhhCCCcEEEeccchhhhhccCcceeeeeccCcchhhHhhhcCCcee
Q 012083 307 LALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFL 386 (471)
Q Consensus 307 ~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l 386 (471)
+++++.+.+.+++|.+++.. ..+.+. ..++|+.+.+|+|+..+|+++++ ||+|||.||++||+++|+|+|
T Consensus 263 ~~~~l~~~~~~~~~~~g~~~---~~~~l~-----~~~~~v~~~~~~~~~~~l~~ad~--~v~~~g~~t~~Ea~a~G~P~v 332 (412)
T 3otg_A 263 AIDGLAGLDADVLVASGPSL---DVSGLG-----EVPANVRLESWVPQAALLPHVDL--VVHHGGSGTTLGALGAGVPQL 332 (412)
T ss_dssp HHHHHHTSSSEEEEECCSSC---CCTTCC-----CCCTTEEEESCCCHHHHGGGCSE--EEESCCHHHHHHHHHHTCCEE
T ss_pred HHHHHHcCCCEEEEEECCCC---Chhhhc-----cCCCcEEEeCCCCHHHHHhcCcE--EEECCchHHHHHHHHhCCCEE
Confidence 99999988999999887651 011121 23678999999999999987776 999999999999999999999
Q ss_pred ecccccchhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Q 012083 387 CWPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKELAQK 450 (471)
Q Consensus 387 ~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~ 450 (471)
++|...||..|+..+++ .|+|..+.. ..++.++|.++|.++|+|+++++++.+.++++.+
T Consensus 333 ~~p~~~~q~~~~~~v~~-~g~g~~~~~---~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~~~~~ 392 (412)
T 3otg_A 333 SFPWAGDSFANAQAVAQ-AGAGDHLLP---DNISPDSVSGAAKRLLAEESYRAGARAVAAEIAA 392 (412)
T ss_dssp ECCCSTTHHHHHHHHHH-HTSEEECCG---GGCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred ecCCchhHHHHHHHHHH-cCCEEecCc---ccCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHhc
Confidence 99999999999999999 699999975 5679999999999999999999999999999876
|
| >3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.3e-29 Score=243.54 Aligned_cols=336 Identities=11% Similarity=0.031 Sum_probs=207.8
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchh--hhHHhhhcCCCCccCCCCCCeEEEeCCCC-CCCCCC
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICE--RIKESRQLGSFSEMGDAQQLVRIVPLPDG-LEPEDD 93 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~ 93 (471)
+.||+|...|+.||++|+++||++|+++||+|+|+++....+ .+.+. |+.++.++.. +.....
T Consensus 2 ~~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~~--------------g~~~~~i~~~~~~~~~~ 67 (365)
T 3s2u_A 2 KGNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPKA--------------GLPLHLIQVSGLRGKGL 67 (365)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGGG--------------TCCEEECC---------
T ss_pred CCcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhhc--------------CCcEEEEECCCcCCCCH
Confidence 468999998889999999999999999999999999876432 33433 8888887632 221111
Q ss_pred ---cccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcc--hHHHHHHHcCCceEEEeCchHHHHHHHhch
Q 012083 94 ---RKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFG--WALQVAAKLELKKASIYTSAPGILAMIMNI 168 (471)
Q Consensus 94 ---~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~ 168 (471)
...+..++..+ .....++++ .+||+||++..+. .+..+|..+|||++..-.
T Consensus 68 ~~~~~~~~~~~~~~-----~~~~~~l~~-------~~PDvVi~~g~~~s~p~~laA~~~~iP~vihe~------------ 123 (365)
T 3s2u_A 68 KSLVKAPLELLKSL-----FQALRVIRQ-------LRPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQ------------ 123 (365)
T ss_dssp -----CHHHHHHHH-----HHHHHHHHH-------HCCSEEEECSSSTHHHHHHHHHHTTCCEEEEEC------------
T ss_pred HHHHHHHHHHHHHH-----HHHHHHHHh-------cCCCEEEEcCCcchHHHHHHHHHcCCCEEEEec------------
Confidence 11122222221 123344555 8999999997655 456788999999987321
Q ss_pred hhhhhhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhchhhhh
Q 012083 169 PKFIEAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSANK 248 (471)
Q Consensus 169 p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~ 248 (471)
+ .+|+.. .+++ .+.++.++......+ +
T Consensus 124 ------n---------------~~~G~~---------------------nr~l------~~~a~~v~~~~~~~~-----~ 150 (365)
T 3s2u_A 124 ------N---------------AVAGTA---------------------NRSL------APIARRVCEAFPDTF-----P 150 (365)
T ss_dssp ------S---------------SSCCHH---------------------HHHH------GGGCSEEEESSTTSS-----C
T ss_pred ------c---------------hhhhhH---------------------HHhh------ccccceeeecccccc-----c
Confidence 0 111110 0111 124455554432211 2
Q ss_pred hCCCcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHHHHhCC----CCEEEEEcC
Q 012083 249 ILPSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELAG----QPFLCGVRP 324 (471)
Q Consensus 249 ~~~~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~----~~~i~~~~~ 324 (471)
...+..++|........ .. .. ......+++++|++..||..... ....+.++++.+. ..++|.++.
T Consensus 151 ~~~k~~~~g~pvr~~~~-----~~-~~--~~~~~~~~~~~ilv~gGs~g~~~--~~~~~~~al~~l~~~~~~~vi~~~G~ 220 (365)
T 3s2u_A 151 ASDKRLTTGNPVRGELF-----LD-AH--ARAPLTGRRVNLLVLGGSLGAEP--LNKLLPEALAQVPLEIRPAIRHQAGR 220 (365)
T ss_dssp C---CEECCCCCCGGGC-----CC-TT--SSCCCTTSCCEEEECCTTTTCSH--HHHHHHHHHHTSCTTTCCEEEEECCT
T ss_pred CcCcEEEECCCCchhhc-----cc-hh--hhcccCCCCcEEEEECCcCCccc--cchhhHHHHHhcccccceEEEEecCc
Confidence 23466677755433211 00 00 11122234569999999975533 2334556665543 356666654
Q ss_pred CCCCCCCCCCCchhHHhhCCCcEEEeccchh-hhhccCcceeeeeccCcchhhHhhhcCCceeecccc----cchhhhHH
Q 012083 325 GFINGSSTNNPDGLVAKVADFGKMVKWAPQE-KVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWG----HDHLYIKS 399 (471)
Q Consensus 325 ~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~-~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~----~DQ~~na~ 399 (471)
. ..+.+ ....+..+.++.+.+|++++ .+|+.+++ +|||+|.+|++|++++|+|+|.+|+. .+|..||+
T Consensus 221 ~----~~~~~-~~~~~~~~~~~~v~~f~~dm~~~l~~aDl--vI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~ 293 (365)
T 3s2u_A 221 Q----HAEIT-AERYRTVAVEADVAPFISDMAAAYAWADL--VICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAE 293 (365)
T ss_dssp T----THHHH-HHHHHHTTCCCEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHHH
T ss_pred c----ccccc-cceecccccccccccchhhhhhhhccceE--EEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHH
Confidence 3 11111 11223456789999999986 79977776 99999999999999999999999974 58999999
Q ss_pred HHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHH
Q 012083 400 CICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKELAQKSVTKEGSSSKNLEYFIKQI 469 (471)
Q Consensus 400 ~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~ 469 (471)
.+++ .|+|..+.. ..++++.|.++|.++|+|++.++++.+-++++.. . .+.+.+.+.|.++
T Consensus 294 ~l~~-~G~a~~l~~---~~~~~~~L~~~i~~ll~d~~~~~~m~~~a~~~~~----~-~aa~~ia~~i~~l 354 (365)
T 3s2u_A 294 FLVR-SGAGRLLPQ---KSTGAAELAAQLSEVLMHPETLRSMADQARSLAK----P-EATRTVVDACLEV 354 (365)
T ss_dssp HHHT-TTSEEECCT---TTCCHHHHHHHHHHHHHCTHHHHHHHHHHHHTCC----T-THHHHHHHHHHHH
T ss_pred HHHH-CCCEEEeec---CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHhcCC----c-cHHHHHHHHHHHH
Confidence 9999 699999974 7789999999999999998765554444433321 2 2344455555443
|
| >2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.3e-27 Score=206.79 Aligned_cols=164 Identities=18% Similarity=0.328 Sum_probs=140.8
Q ss_pred cCcchhcccccCCCCCcEEEEecCccc-cCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCCchhHHhhCCCcEEE
Q 012083 271 SEDLTCLSWLDKQPPGSVIYAAFGSIS-KLSQQQFNELALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMV 349 (471)
Q Consensus 271 ~~~~~l~~~l~~~~~~~vv~vs~GS~~-~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~ 349 (471)
+.+.++.+|++..+++++||+++||+. ......+..+++++++.+.+++|+.++. . ++ ..++|+++.
T Consensus 6 ~l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~----~----~~----~~~~~v~~~ 73 (170)
T 2o6l_A 6 PLPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGN----K----PD----TLGLNTRLY 73 (170)
T ss_dssp CCCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSS----C----CT----TCCTTEEEE
T ss_pred CCCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCc----C----cc----cCCCcEEEe
Confidence 456788899987766789999999985 4567788899999998889999998754 1 11 236789999
Q ss_pred eccchhhhhccCcceeeeeccCcchhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHH
Q 012083 350 KWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVD 429 (471)
Q Consensus 350 ~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~ 429 (471)
+|+||.+++.|+.+++||||||+||++||+++|+|+|++|...||..||.++++ .|+|+.++. ..++.++|.++|.
T Consensus 74 ~~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~-~g~g~~~~~---~~~~~~~l~~~i~ 149 (170)
T 2o6l_A 74 KWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKA-RGAAVRVDF---NTMSSTDLLNALK 149 (170)
T ss_dssp SSCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHT-TTSEEECCT---TTCCHHHHHHHHH
T ss_pred cCCCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHH-cCCeEEecc---ccCCHHHHHHHHH
Confidence 999999999888899999999999999999999999999999999999999999 699999975 6789999999999
Q ss_pred HHhCcHHHHHHHHHHHHHHHH
Q 012083 430 ELLSNDVVRKNALKLKELAQK 450 (471)
Q Consensus 430 ~ll~~~~~~~~a~~l~~~~~~ 450 (471)
++++|++|+++++++++.+++
T Consensus 150 ~ll~~~~~~~~a~~~~~~~~~ 170 (170)
T 2o6l_A 150 RVINDPSYKENVMKLSRIQHD 170 (170)
T ss_dssp HHHHCHHHHHHHHHHC-----
T ss_pred HHHcCHHHHHHHHHHHHHhhC
Confidence 999999999999999998864
|
| >1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=3e-21 Score=187.74 Aligned_cols=318 Identities=12% Similarity=0.046 Sum_probs=197.4
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchh--hhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCCc
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICE--RIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDDR 94 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 94 (471)
+|||++++.+..||..+++.|+++|+++||+|++++...... .+.+. |+.+..++......
T Consensus 6 ~mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~--------------g~~~~~~~~~~~~~--- 68 (364)
T 1f0k_A 6 GKRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKH--------------GIEIDFIRISGLRG--- 68 (364)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGGG--------------TCEEEECCCCCCTT---
T ss_pred CcEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhcccc--------------CCceEEecCCccCc---
Confidence 489999998888999999999999999999999999865322 22222 77877765321111
Q ss_pred ccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCc--chHHHHHHHcCCceEEEeCchHHHHHHHhchhhhh
Q 012083 95 KDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTF--GWALQVAAKLELKKASIYTSAPGILAMIMNIPKFI 172 (471)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~--~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~ 172 (471)
......+..... ....+..+.+.+++ .+||+|+++... ..+..++..+|+|++......
T Consensus 69 ~~~~~~~~~~~~-~~~~~~~l~~~l~~----~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~-------------- 129 (364)
T 1f0k_A 69 KGIKALIAAPLR-IFNAWRQARAIMKA----YKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNG-------------- 129 (364)
T ss_dssp CCHHHHHTCHHH-HHHHHHHHHHHHHH----HCCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSS--------------
T ss_pred CccHHHHHHHHH-HHHHHHHHHHHHHh----cCCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCC--------------
Confidence 111111111000 01112233333333 799999998653 245677888999998643210
Q ss_pred hhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhchhhhhhCCC
Q 012083 173 EAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSANKILPS 252 (471)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~ 252 (471)
.++ ...+. ..+.++.+++.+... .++
T Consensus 130 -------------------~~~---------------------~~~~~------~~~~~d~v~~~~~~~--------~~~ 155 (364)
T 1f0k_A 130 -------------------IAG---------------------LTNKW------LAKIATKVMQAFPGA--------FPN 155 (364)
T ss_dssp -------------------SCC---------------------HHHHH------HTTTCSEEEESSTTS--------SSS
T ss_pred -------------------CCc---------------------HHHHH------HHHhCCEEEecChhh--------cCC
Confidence 000 00011 123567777655332 124
Q ss_pred cceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHHHHhC--CCCEEEEEcCCCCCCC
Q 012083 253 IIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELA--GQPFLCGVRPGFINGS 330 (471)
Q Consensus 253 ~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~ 330 (471)
+..+|....... ..... ..+.+...+++++|++..|+... ......++++++.+ +.++++.+++. .
T Consensus 156 ~~~i~n~v~~~~-----~~~~~-~~~~~~~~~~~~~il~~~g~~~~--~k~~~~li~a~~~l~~~~~~l~i~G~~----~ 223 (364)
T 1f0k_A 156 AEVVGNPVRTDV-----LALPL-PQQRLAGREGPVRVLVVGGSQGA--RILNQTMPQVAAKLGDSVTIWHQSGKG----S 223 (364)
T ss_dssp CEECCCCCCHHH-----HTSCC-HHHHHTTCCSSEEEEEECTTTCC--HHHHHHHHHHHHHHGGGEEEEEECCTT----C
T ss_pred ceEeCCccchhh-----cccch-hhhhcccCCCCcEEEEEcCchHh--HHHHHHHHHHHHHhcCCcEEEEEcCCc----h
Confidence 555553322110 00000 01122222345678888888533 34445566666554 45666666654 1
Q ss_pred CCCCCchhHH---hhC-CCcEEEeccch-hhhhccCcceeeeeccCcchhhHhhhcCCceeecccc---cchhhhHHHHH
Q 012083 331 STNNPDGLVA---KVA-DFGKMVKWAPQ-EKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWG---HDHLYIKSCIC 402 (471)
Q Consensus 331 ~~~lp~~~~~---~~~-~nv~~~~~vpq-~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~---~DQ~~na~~v~ 402 (471)
.+.+.+ +.+ +|+.+.+|+++ ..+++.+++ +|+++|.+++.||+++|+|+|+.|.. .||..|+..+.
T Consensus 224 ----~~~l~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~--~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~ 297 (364)
T 1f0k_A 224 ----QQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADV--VVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLE 297 (364)
T ss_dssp ----HHHHHHHHHHTTCTTSEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHH
T ss_pred ----HHHHHHHHhhcCCCceEEecchhhHHHHHHhCCE--EEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHH
Confidence 122222 222 58999999955 578977777 99999999999999999999999987 79999999999
Q ss_pred hhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHHH
Q 012083 403 DDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKELA 448 (471)
Q Consensus 403 ~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~ 448 (471)
+ .|.|..++. ..++.+++.++|.++ |++.+++..+-+++.
T Consensus 298 ~-~g~g~~~~~---~d~~~~~la~~i~~l--~~~~~~~~~~~~~~~ 337 (364)
T 1f0k_A 298 K-AGAAKIIEQ---PQLSVDAVANTLAGW--SRETLLTMAERARAA 337 (364)
T ss_dssp H-TTSEEECCG---GGCCHHHHHHHHHTC--CHHHHHHHHHHHHHT
T ss_pred h-CCcEEEecc---ccCCHHHHHHHHHhc--CHHHHHHHHHHHHHh
Confidence 9 599998875 556789999999998 877776665555443
|
| >3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=5.6e-16 Score=143.00 Aligned_cols=115 Identities=7% Similarity=-0.001 Sum_probs=86.8
Q ss_pred CcEEEEecCccccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCCchhHHh--hCCCcEEEeccchh-hhhccCc
Q 012083 286 GSVIYAAFGSISKLSQQQFNELALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAK--VADFGKMVKWAPQE-KVLAHPS 362 (471)
Q Consensus 286 ~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~--~~~nv~~~~~vpq~-~lL~~~~ 362 (471)
.+.|+|++|... ..+....+++++.+.. ++.++++.. ....+.+.+. ...|+.+..|++++ .+|+.++
T Consensus 157 ~~~ILv~~GG~d--~~~l~~~vl~~L~~~~-~i~vv~G~~------~~~~~~l~~~~~~~~~v~v~~~~~~m~~~m~~aD 227 (282)
T 3hbm_A 157 KYDFFICMGGTD--IKNLSLQIASELPKTK-IISIATSSS------NPNLKKLQKFAKLHNNIRLFIDHENIAKLMNESN 227 (282)
T ss_dssp CEEEEEECCSCC--TTCHHHHHHHHSCTTS-CEEEEECTT------CTTHHHHHHHHHTCSSEEEEESCSCHHHHHHTEE
T ss_pred CCeEEEEECCCc--hhhHHHHHHHHhhcCC-CEEEEECCC------chHHHHHHHHHhhCCCEEEEeCHHHHHHHHHHCC
Confidence 458999999642 3335566778876544 566666654 1222333222 13589999999987 6996666
Q ss_pred ceeeeeccCcchhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeecC
Q 012083 363 VACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEP 413 (471)
Q Consensus 363 ~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~ 413 (471)
+ +||+|| +|++|++++|+|++++|...+|..||..+++ .|++..+..
T Consensus 228 l--vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~-~G~~~~~~~ 274 (282)
T 3hbm_A 228 K--LIISAS-SLVNEALLLKANFKAICYVKNQESTATWLAK-KGYEVEYKY 274 (282)
T ss_dssp E--EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHHH-TTCEEECGG
T ss_pred E--EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHH-CCCEEEcch
Confidence 5 999999 8999999999999999999999999999999 699999853
|
| >2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A | Back alignment and structure |
|---|
Probab=99.60 E-value=2.4e-15 Score=133.04 Aligned_cols=134 Identities=8% Similarity=0.080 Sum_probs=94.7
Q ss_pred cCCCCCcEEEEecCccccCCHHHHHHH-----HHHHHhCC-CCEEEEEcCCCCCCCCCCCCchhHHhh---------C--
Q 012083 281 DKQPPGSVIYAAFGSISKLSQQQFNEL-----ALGLELAG-QPFLCGVRPGFINGSSTNNPDGLVAKV---------A-- 343 (471)
Q Consensus 281 ~~~~~~~vv~vs~GS~~~~~~~~~~~~-----~~al~~~~-~~~i~~~~~~~~~~~~~~lp~~~~~~~---------~-- 343 (471)
...+++++|||+.||... -.+.+..+ +++|...+ .++++.++.... .....+.+.. |
T Consensus 23 ~~~~~~~~VlVtgGS~~~-~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~-----~~~~~~~~~~~~~~~~~l~p~~ 96 (224)
T 2jzc_A 23 EGIIEEKALFVTCGATVP-FPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYS-----SEFEHLVQERGGQRESQKIPID 96 (224)
T ss_dssp -CCCCSCCEEEECCSCCS-CHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSC-----CCCCSHHHHHTCEECSCCCSSC
T ss_pred CCCCCCCEEEEEcCCchH-HHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCch-----hhHHHHHHhhhccccccccccc
Confidence 333456799999999732 23333333 48887777 789999886511 0111111111 1
Q ss_pred ---------------C--CcEEEeccchh-hhhc-cCcceeeeeccCcchhhHhhhcCCceeecccc----cchhhhHHH
Q 012083 344 ---------------D--FGKMVKWAPQE-KVLA-HPSVACYLTHCGWNSTMEGISMGVPFLCWPWG----HDHLYIKSC 400 (471)
Q Consensus 344 ---------------~--nv~~~~~vpq~-~lL~-~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~----~DQ~~na~~ 400 (471)
. ++.+.+|++++ .+|+ .+++ +|||||.||++|++++|+|+|++|.. .||..||++
T Consensus 97 ~~~~~~~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~ 174 (224)
T 2jzc_A 97 QFGCGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADK 174 (224)
T ss_dssp TTCTTCSCEEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHH
T ss_pred cccccccccccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHH
Confidence 2 34456888886 7896 6666 99999999999999999999999984 479999999
Q ss_pred HHhhhcceeeecCCCCCCcCHhHHHHHHHHH
Q 012083 401 ICDDWKIGLWLEPDDNGIIGRHEIKRKVDEL 431 (471)
Q Consensus 401 v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~l 431 (471)
+++ .|+|+.+ +.+.|.++|+++
T Consensus 175 l~~-~G~~~~~--------~~~~L~~~i~~l 196 (224)
T 2jzc_A 175 FVE-LGYVWSC--------APTETGLIAGLR 196 (224)
T ss_dssp HHH-HSCCCEE--------CSCTTTHHHHHH
T ss_pred HHH-CCCEEEc--------CHHHHHHHHHHH
Confidence 999 6998766 446777777776
|
| >1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3 | Back alignment and structure |
|---|
Probab=99.56 E-value=1.3e-13 Score=134.32 Aligned_cols=321 Identities=11% Similarity=-0.014 Sum_probs=168.0
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhC-CCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEE-EeCCCCCCCCCCcc
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADC-RIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRI-VPLPDGLEPEDDRK 95 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~r-Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~~ 95 (471)
|||++++.. .++......|+++|.++ ||+|.++++............ . .++.+ ..++-.- ...
T Consensus 6 mkIl~v~~~-~~~~~~~~~l~~~L~~~~g~~v~~~~~~~~~~~~~~~~~-~---------~~~~~~~~~~~~~----~~~ 70 (376)
T 1v4v_A 6 KRVVLAFGT-RPEATKMAPVYLALRGIPGLKPLVLLTGQHREQLRQALS-L---------FGIQEDRNLDVMQ----ERQ 70 (376)
T ss_dssp EEEEEEECS-HHHHHHHHHHHHHHHTSTTEEEEEEECSSCHHHHHHHHH-T---------TTCCCSEECCCCS----SCC
T ss_pred eEEEEEEec-cHHHHHHHHHHHHHHhCCCCceEEEEcCCcHHHHHHHHH-H---------cCCCcccccccCC----CCc
Confidence 899999844 44455567889999998 899887766543332221110 0 14332 2222110 111
Q ss_pred cHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECC--Cc-chHHHHHHHcCCceEEEeCchHHHHHHHhchhhhh
Q 012083 96 DEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADV--TF-GWALQVAAKLELKKASIYTSAPGILAMIMNIPKFI 172 (471)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~--~~-~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~ 172 (471)
.....+.. ....+.+++++ .+||+|++-. .. ..+..+|..+|||++.+.....
T Consensus 71 ~~~~~~~~----~~~~l~~~l~~-------~~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~~~~------------- 126 (376)
T 1v4v_A 71 ALPDLAAR----ILPQAARALKE-------MGADYVLVHGDTLTTFAVAWAAFLEGIPVGHVEAGLR------------- 126 (376)
T ss_dssp CHHHHHHH----HHHHHHHHHHH-------TTCSEEEEESSCHHHHHHHHHHHHTTCCEEEETCCCC-------------
T ss_pred cHHHHHHH----HHHHHHHHHHH-------cCCCEEEEeCChHHHHHHHHHHHHhCCCEEEEeCCCc-------------
Confidence 22111111 11234455555 8999999832 22 2456788999999875422100
Q ss_pred hhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhchhhh-hh-C
Q 012083 173 EAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSAN-KI-L 250 (471)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~-~~-~ 250 (471)
.... .. .+ ........+ ...++.+++.+...-+.-.. .. .
T Consensus 127 ------------------------~~~~--~~-~~-----~~~~~~~~~------~~~~~~~~~~s~~~~~~l~~~g~~~ 168 (376)
T 1v4v_A 127 ------------------------SGNL--KE-PF-----PEEANRRLT------DVLTDLDFAPTPLAKANLLKEGKRE 168 (376)
T ss_dssp ------------------------CSCT--TS-ST-----THHHHHHHH------HHHCSEEEESSHHHHHHHHTTTCCG
T ss_pred ------------------------cccc--cC-CC-----chHHHHHHH------HHHhceeeCCCHHHHHHHHHcCCCc
Confidence 0000 00 00 011111111 13467777776554332211 11 1
Q ss_pred CCcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHHHHhC-----CCCEEEEEcCC
Q 012083 251 PSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELA-----GQPFLCGVRPG 325 (471)
Q Consensus 251 ~~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~ 325 (471)
.++..+|....+.. ...+...++.+.+ ++++.|+++.|...... .+..+++|++.+ +.++++..+++
T Consensus 169 ~ki~vi~n~~~d~~---~~~~~~~~~~~~~---~~~~~vl~~~gr~~~~k--~~~~ll~a~~~l~~~~~~~~lv~~~g~~ 240 (376)
T 1v4v_A 169 EGILVTGQTGVDAV---LLAAKLGRLPEGL---PEGPYVTVTMHRRENWP--LLSDLAQALKRVAEAFPHLTFVYPVHLN 240 (376)
T ss_dssp GGEEECCCHHHHHH---HHHHHHCCCCTTC---CSSCEEEECCCCGGGGG--GHHHHHHHHHHHHHHCTTSEEEEECCSC
T ss_pred ceEEEECCchHHHH---hhhhhhhHHHHhc---CCCCEEEEEeCcccchH--HHHHHHHHHHHHHhhCCCeEEEEECCCC
Confidence 24666664321110 0000001111222 23457788888653222 344455555432 34555444432
Q ss_pred CCCCCCCCCCchhHHhh--CCCcEEEeccch---hhhhccCcceeeeeccCcchhhHhhhcCCceeecccccchhhhHHH
Q 012083 326 FINGSSTNNPDGLVAKV--ADFGKMVKWAPQ---EKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSC 400 (471)
Q Consensus 326 ~~~~~~~~lp~~~~~~~--~~nv~~~~~vpq---~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~ 400 (471)
..+.+.+.+.. .+++.+.+++++ ..+++.+++ ||+++| |.+.||+++|+|+|+.+...++..
T Consensus 241 ------~~~~~~l~~~~~~~~~v~~~g~~g~~~~~~~~~~ad~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~---- 307 (376)
T 1v4v_A 241 ------PVVREAVFPVLKGVRNFVLLDPLEYGSMAALMRASLL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPE---- 307 (376)
T ss_dssp ------HHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTEEE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHH----
T ss_pred ------HHHHHHHHHHhccCCCEEEECCCCHHHHHHHHHhCcE--EEECCc-CHHHHHHHcCCCEEeccCCCcchh----
Confidence 00111222211 358888866665 478866666 998884 446699999999999876666554
Q ss_pred HHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHH
Q 012083 401 ICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALK 443 (471)
Q Consensus 401 v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~ 443 (471)
+.+ .|.|..+. .+.++|.+++.++++|++.+++..+
T Consensus 308 ~~~-~g~g~lv~------~d~~~la~~i~~ll~d~~~~~~~~~ 343 (376)
T 1v4v_A 308 GLK-AGILKLAG------TDPEGVYRVVKGLLENPEELSRMRK 343 (376)
T ss_dssp HHH-HTSEEECC------SCHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred hhc-CCceEECC------CCHHHHHHHHHHHHhChHhhhhhcc
Confidence 245 38887773 2889999999999999876655544
|
| >3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.51 E-value=5.1e-13 Score=130.90 Aligned_cols=345 Identities=11% Similarity=0.017 Sum_probs=180.9
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhC--CCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEE-EeCCCCCCCCC
Q 012083 16 TNVHVLLVSFPAQGHVASLMKLAHRLADC--RIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRI-VPLPDGLEPED 92 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~~~La~~L~~r--Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~ 92 (471)
++|||+++. ++...+.=+.+|.++|.++ |+++.++.+....+...+.. ..+ ++.. +.+. -..
T Consensus 26 ~~~kI~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~~tG~h~~m~~~~~-~~~---------~i~~~~~l~----v~~ 90 (403)
T 3ot5_A 26 AKIKVMSIF-GTRPEAIKMAPLVLALEKEPETFESTVVITAQHREMLDQVL-EIF---------DIKPDIDLD----IMK 90 (403)
T ss_dssp CCEEEEEEE-CSHHHHHHHHHHHHHHHTCTTTEEEEEEECC-----CHHHH-HHT---------TCCCSEECC----CCC
T ss_pred ccceEEEEE-ecChhHHHHHHHHHHHHhCCCCCcEEEEEecCcHHHHHHHH-Hhc---------CCCCCcccc----cCC
Confidence 457998887 7777777779999999987 68987665553321111110 001 3311 1111 111
Q ss_pred CcccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECC--C-cchHHHHHHHcCCceEEEeCchHHHHHHHhchh
Q 012083 93 DRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADV--T-FGWALQVAAKLELKKASIYTSAPGILAMIMNIP 169 (471)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~--~-~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p 169 (471)
........ + ......+.+++++ .+||+|++-. . ..++..+|..+|||++.+....
T Consensus 91 ~~~~~~~~---~-~~~~~~l~~~l~~-------~kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~~agl----------- 148 (403)
T 3ot5_A 91 KGQTLAEI---T-SRVMNGINEVIAA-------ENPDIVLVHGDTTTSFAAGLATFYQQKMLGHVEAGL----------- 148 (403)
T ss_dssp -CCCHHHH---H-HHHHHHHHHHHHH-------HCCSEEEEETTCHHHHHHHHHHHHTTCEEEEESCCC-----------
T ss_pred CCCCHHHH---H-HHHHHHHHHHHHH-------cCCCEEEEECCchhHHHHHHHHHHhCCCEEEEECCc-----------
Confidence 12233221 1 1223335566666 8999999732 2 2345788999999987643210
Q ss_pred hhhhhCCCCCCcccccccccccCCCCCCCCc-cccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhchhhhh
Q 012083 170 KFIEAGIISSDGIVIKNEKIELSPYLPAASP-AEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSANK 248 (471)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~ 248 (471)
..+.. ..++ ....+..+. ..++.+++.+...-+.-...
T Consensus 149 --------------------------rs~~~~~~~p---------~~~~r~~~~------~~a~~~~~~se~~~~~l~~~ 187 (403)
T 3ot5_A 149 --------------------------RTWNKYSPFP---------EEMNRQLTG------VMADIHFSPTKQAKENLLAE 187 (403)
T ss_dssp --------------------------CCSCTTSSTT---------HHHHHHHHH------HHCSEEEESSHHHHHHHHHT
T ss_pred --------------------------cccccccCCc---------HHHHHHHHH------HhcCEEECCCHHHHHHHHHc
Confidence 00000 0000 111111111 24677777776544332111
Q ss_pred -h-CCCcceeccccCCCCC-CCCCCcCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHHHHh-----CCCCEEE
Q 012083 249 -I-LPSIIPVGPLIANGQP-TGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLEL-----AGQPFLC 320 (471)
Q Consensus 249 -~-~~~~~~vGp~~~~~~~-~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~-----~~~~~i~ 320 (471)
. +.++..+|....+... .... ....+..+.+ +++++++++.|....... .+..+++++.. .+.++++
T Consensus 188 Gi~~~~i~vvGn~~~D~~~~~~~~-~~~~~~~~~l---~~~~~vlv~~~r~~~~~~-~l~~ll~a~~~l~~~~~~~~~v~ 262 (403)
T 3ot5_A 188 GKDPATIFVTGNTAIDALKTTVQK-DYHHPILENL---GDNRLILMTAHRRENLGE-PMQGMFEAVREIVESREDTELVY 262 (403)
T ss_dssp TCCGGGEEECCCHHHHHHHHHSCT-TCCCHHHHSC---TTCEEEEECCCCHHHHTT-HHHHHHHHHHHHHHHCTTEEEEE
T ss_pred CCCcccEEEeCCchHHHHHhhhhh-hcchHHHHhc---cCCCEEEEEeCcccccCc-HHHHHHHHHHHHHHhCCCceEEE
Confidence 1 2368888854322100 0000 0011222222 345678887664322111 24455555533 2445665
Q ss_pred EEcCCCCCCCCCCCCchhHHh--hCCCcEEEeccch---hhhhccCcceeeeeccCcchhhHhhhcCCceeecccccchh
Q 012083 321 GVRPGFINGSSTNNPDGLVAK--VADFGKMVKWAPQ---EKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHL 395 (471)
Q Consensus 321 ~~~~~~~~~~~~~lp~~~~~~--~~~nv~~~~~vpq---~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~ 395 (471)
..+++ ..+...+.+. ..+++++.+++++ ..+++++++ +|+..|..+ .||..+|+|+|++|-..++.
T Consensus 263 ~~~~~------~~~~~~l~~~~~~~~~v~l~~~l~~~~~~~l~~~ad~--vv~~SGg~~-~EA~a~g~PvV~~~~~~~~~ 333 (403)
T 3ot5_A 263 PMHLN------PAVREKAMAILGGHERIHLIEPLDAIDFHNFLRKSYL--VFTDSGGVQ-EEAPGMGVPVLVLRDTTERP 333 (403)
T ss_dssp ECCSC------HHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHEEE--EEECCHHHH-HHGGGTTCCEEECCSSCSCH
T ss_pred ecCCC------HHHHHHHHHHhCCCCCEEEeCCCCHHHHHHHHHhcCE--EEECCccHH-HHHHHhCCCEEEecCCCcch
Confidence 54432 0011111111 2368889998874 368866666 998875333 69999999999997666655
Q ss_pred hhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHH
Q 012083 396 YIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKELAQKSVTKEGSSSKNLEYFIK 467 (471)
Q Consensus 396 ~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~ 467 (471)
. +.+ .|.|+.+.. +.++|.+++.++++|++.++++.+.+..+ ..|+++.+.++.+.+
T Consensus 334 e----~v~-~g~~~lv~~------d~~~l~~ai~~ll~~~~~~~~m~~~~~~~----g~~~aa~rI~~~l~~ 390 (403)
T 3ot5_A 334 E----GIE-AGTLKLIGT------NKENLIKEALDLLDNKESHDKMAQAANPY----GDGFAANRILAAIKS 390 (403)
T ss_dssp H----HHH-HTSEEECCS------CHHHHHHHHHHHHHCHHHHHHHHHSCCTT----CCSCHHHHHHHHHHH
T ss_pred h----hee-CCcEEEcCC------CHHHHHHHHHHHHcCHHHHHHHHhhcCcc----cCCcHHHHHHHHHHH
Confidence 3 245 388877742 78999999999999987766554433222 335555555544443
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=2.5e-11 Score=120.48 Aligned_cols=343 Identities=12% Similarity=0.057 Sum_probs=175.5
Q ss_pred cEEEEEcC-----------CCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCC
Q 012083 18 VHVLLVSF-----------PAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPD 86 (471)
Q Consensus 18 ~~Il~~~~-----------~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 86 (471)
|||+|++. ...|+-..+..|++.|.++||+|++++........... ...++++++.++.
T Consensus 21 mkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~----------~~~~~v~v~~~~~ 90 (438)
T 3c48_A 21 MRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIV----------RVAENLRVINIAA 90 (438)
T ss_dssp CEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCSEE----------EEETTEEEEEECC
T ss_pred heeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCcccc----------cccCCeEEEEecC
Confidence 89999995 24688899999999999999999999875432211000 0113777777654
Q ss_pred CCCCCCCcccHHHHHHHHHhhccHHHHHHHHH-HhcccCCCCeeEEEECCCcc--hHHHHHHHcCCceEEEeCchHHHHH
Q 012083 87 GLEPEDDRKDEAKMTRSISKVMPGYLEELIQK-INQQEEDEKITCVIADVTFG--WALQVAAKLELKKASIYTSAPGILA 163 (471)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~-l~~~~~~~~pD~vV~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~ 163 (471)
..............+..+ .+.+++. ++.. .+||+|++..... .+..++..+++|+|..........
T Consensus 91 ~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~---~~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~- 159 (438)
T 3c48_A 91 GPYEGLSKEELPTQLAAF-------TGGMLSFTRREK---VTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAAVK- 159 (438)
T ss_dssp SCSSSCCGGGGGGGHHHH-------HHHHHHHHHHHT---CCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSSCHHHH-
T ss_pred CCccccchhHHHHHHHHH-------HHHHHHHHHhcc---CCCCEEEeCCccHHHHHHHHHHHcCCCEEEEecCCcccc-
Confidence 321111111111111111 1122222 2210 2599999875322 344567788999988755433210
Q ss_pred HHhchhhhhhhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhc
Q 012083 164 MIMNIPKFIEAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELA 243 (471)
Q Consensus 164 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~ 243 (471)
. ..+. . ............. ...+..++.+++.|....+
T Consensus 160 ---~-------------------------~~~~---------~---~~~~~~~~~~~~~--~~~~~~~d~ii~~s~~~~~ 197 (438)
T 3c48_A 160 ---N-------------------------SYRD---------D---SDTPESEARRICE--QQLVDNADVLAVNTQEEMQ 197 (438)
T ss_dssp ---S-------------------------CC----------------CCHHHHHHHHHH--HHHHHHCSEEEESSHHHHH
T ss_pred ---c-------------------------cccc---------c---cCCcchHHHHHHH--HHHHhcCCEEEEcCHHHHH
Confidence 0 0000 0 0000000111111 1224679999999887655
Q ss_pred hhhhhh--C-CCcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCcccc-CCHHHHHHHHHHHH-hC---C
Q 012083 244 PSANKI--L-PSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISK-LSQQQFNELALGLE-LA---G 315 (471)
Q Consensus 244 ~~~~~~--~-~~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~-~~~~~~~~~~~al~-~~---~ 315 (471)
.-...+ . .++..|...................+.+-+...+ ...+++..|+... ...+.+-..+..+. +. +
T Consensus 198 ~~~~~~g~~~~k~~vi~ngvd~~~~~~~~~~~~~~~r~~~~~~~-~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~p~~~ 276 (438)
T 3c48_A 198 DLMHHYDADPDRISVVSPGADVELYSPGNDRATERSRRELGIPL-HTKVVAFVGRLQPFKGPQVLIKAVAALFDRDPDRN 276 (438)
T ss_dssp HHHHHHCCCGGGEEECCCCCCTTTSCCC----CHHHHHHTTCCS-SSEEEEEESCBSGGGCHHHHHHHHHHHHHHCTTCS
T ss_pred HHHHHhCCChhheEEecCCccccccCCcccchhhhhHHhcCCCC-CCcEEEEEeeecccCCHHHHHHHHHHHHhhCCCcc
Confidence 431212 1 2444454332221100000000001222222222 2366777787632 22333333333332 22 2
Q ss_pred CCEEEEEcCCCCCCCCCCCCchhH---Hh--hCCCcEEEeccchh---hhhccCcceeeeec----cCcchhhHhhhcCC
Q 012083 316 QPFLCGVRPGFINGSSTNNPDGLV---AK--VADFGKMVKWAPQE---KVLAHPSVACYLTH----CGWNSTMEGISMGV 383 (471)
Q Consensus 316 ~~~i~~~~~~~~~~~~~~lp~~~~---~~--~~~nv~~~~~vpq~---~lL~~~~~~~~ItH----gG~~s~~eal~~Gv 383 (471)
.+++ .++.....+ ...+.+. ++ ..+++.+.+|+|+. .+++.+++ +|.. |..+++.||+++|+
T Consensus 277 ~~l~-i~G~~~~~g---~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~ 350 (438)
T 3c48_A 277 LRVI-ICGGPSGPN---ATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADI--VAVPSFNESFGLVAMEAQASGT 350 (438)
T ss_dssp EEEE-EECCBC---------CHHHHHHHHTTCTTTEEEECCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHHTTC
T ss_pred eEEE-EEeCCCCCC---cHHHHHHHHHHHcCCCCcEEEcCCCChHHHHHHHHhCCE--EEECccccCCchHHHHHHHcCC
Confidence 3333 344310000 1112222 22 24789999999864 67877777 6654 33568999999999
Q ss_pred ceeecccccchhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHH
Q 012083 384 PFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKN 440 (471)
Q Consensus 384 P~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~ 440 (471)
|+|+.+. ......+.+ -+.|..++. -+.+++.++|.++++|++.+++
T Consensus 351 PvI~~~~----~~~~e~i~~-~~~g~~~~~-----~d~~~la~~i~~l~~~~~~~~~ 397 (438)
T 3c48_A 351 PVIAARV----GGLPIAVAE-GETGLLVDG-----HSPHAWADALATLLDDDETRIR 397 (438)
T ss_dssp CEEEESC----TTHHHHSCB-TTTEEEESS-----CCHHHHHHHHHHHHHCHHHHHH
T ss_pred CEEecCC----CChhHHhhC-CCcEEECCC-----CCHHHHHHHHHHHHcCHHHHHH
Confidence 9999753 344555556 367888853 4789999999999999865443
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=3.6e-11 Score=117.46 Aligned_cols=324 Identities=13% Similarity=0.050 Sum_probs=178.5
Q ss_pred CCcEEEEEcC--C--CcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCC
Q 012083 16 TNVHVLLVSF--P--AQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPE 91 (471)
Q Consensus 16 ~~~~Il~~~~--~--~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 91 (471)
++|||++++. + ..|.-..+..+++.| +||+|++++........... ....++.+..++......
T Consensus 3 ~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~ 70 (394)
T 3okp_A 3 ASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAY----------DKTLDYEVIRWPRSVMLP 70 (394)
T ss_dssp -CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHH----------HTTCSSEEEEESSSSCCS
T ss_pred CCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhh----------ccccceEEEEcccccccc
Confidence 4589999975 3 467888899999999 79999999887665422222 112377777765422111
Q ss_pred CCcccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcc--hHHHHHHHcCCceEEEeCchHHHHHHHhchh
Q 012083 92 DDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFG--WALQVAAKLELKKASIYTSAPGILAMIMNIP 169 (471)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p 169 (471)
.. .....+.+++++ .+||+|++..... ....++..+++|.+++.........
T Consensus 71 ----~~---------~~~~~l~~~~~~-------~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~------ 124 (394)
T 3okp_A 71 ----TP---------TTAHAMAEIIRE-------REIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVGW------ 124 (394)
T ss_dssp ----CH---------HHHHHHHHHHHH-------TTCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHHH------
T ss_pred ----ch---------hhHHHHHHHHHh-------cCCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhhh------
Confidence 11 111224455555 8999999865443 4455688899985553322111000
Q ss_pred hhhhhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhchhhhhh
Q 012083 170 KFIEAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSANKI 249 (471)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~ 249 (471)
.. ........ ......++.+++.|....+.-....
T Consensus 125 ------------------------------------~~------~~~~~~~~---~~~~~~~d~ii~~s~~~~~~~~~~~ 159 (394)
T 3okp_A 125 ------------------------------------SM------LPGSRQSL---RKIGTEVDVLTYISQYTLRRFKSAF 159 (394)
T ss_dssp ------------------------------------TT------SHHHHHHH---HHHHHHCSEEEESCHHHHHHHHHHH
T ss_pred ------------------------------------hh------cchhhHHH---HHHHHhCCEEEEcCHHHHHHHHHhc
Confidence 00 00001111 1123678999999887655432222
Q ss_pred --CCCcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccc-cCCHHHHHHHHHHHHh--CCCCEEEEEcC
Q 012083 250 --LPSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSIS-KLSQQQFNELALGLEL--AGQPFLCGVRP 324 (471)
Q Consensus 250 --~~~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~-~~~~~~~~~~~~al~~--~~~~~i~~~~~ 324 (471)
..++..|...................+.+-+... ++..+++..|+.. ....+.+...+..+.+ .+.++++. +.
T Consensus 160 ~~~~~~~vi~ngv~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~-G~ 237 (394)
T 3okp_A 160 GSHPTFEHLPSGVDVKRFTPATPEDKSATRKKLGFT-DTTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLIV-GS 237 (394)
T ss_dssp CSSSEEEECCCCBCTTTSCCCCHHHHHHHHHHTTCC-TTCCEEEEESCSCGGGCHHHHHHHHHHHHHHSTTCEEEEE-CC
T ss_pred CCCCCeEEecCCcCHHHcCCCCchhhHHHHHhcCCC-cCceEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEE-cC
Confidence 2355555433322110000000112222222222 2336677778762 2233333333333322 24454443 32
Q ss_pred CCCCCCCCCCCchhH---HhhCCCcEEEeccchh---hhhccCcceeeee-----------ccCcchhhHhhhcCCceee
Q 012083 325 GFINGSSTNNPDGLV---AKVADFGKMVKWAPQE---KVLAHPSVACYLT-----------HCGWNSTMEGISMGVPFLC 387 (471)
Q Consensus 325 ~~~~~~~~~lp~~~~---~~~~~nv~~~~~vpq~---~lL~~~~~~~~It-----------HgG~~s~~eal~~GvP~l~ 387 (471)
. ...+.+. ....+++.+.+|+|+. .+++.+++ +|. -|..+++.||+++|+|+|+
T Consensus 238 g-------~~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~ 308 (394)
T 3okp_A 238 G-------RYESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADI--FAMPARTRGGGLDVEGLGIVYLEAQACGVPVIA 308 (394)
T ss_dssp C-------TTHHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCSE--EEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEE
T ss_pred c-------hHHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCCE--EEecCccccccccccccCcHHHHHHHcCCCEEE
Confidence 2 1111221 2235789999999865 57877777 665 5556789999999999999
Q ss_pred cccccchhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHH
Q 012083 388 WPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKL 444 (471)
Q Consensus 388 ~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l 444 (471)
.+.. .....+.+ |.|..++. -+.+++.++|.++++|++.+++..+-
T Consensus 309 ~~~~----~~~e~i~~--~~g~~~~~-----~d~~~l~~~i~~l~~~~~~~~~~~~~ 354 (394)
T 3okp_A 309 GTSG----GAPETVTP--ATGLVVEG-----SDVDKLSELLIELLDDPIRRAAMGAA 354 (394)
T ss_dssp CSST----TGGGGCCT--TTEEECCT-----TCHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred eCCC----ChHHHHhc--CCceEeCC-----CCHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 7653 23333334 57777743 47899999999999998655544433
|
| >3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.46 E-value=4.2e-12 Score=124.21 Aligned_cols=327 Identities=11% Similarity=0.007 Sum_probs=175.3
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhC-CCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEE-EeCCCCCCCCCCcc
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADC-RIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRI-VPLPDGLEPEDDRK 95 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~r-Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~~ 95 (471)
|||+++. +++....=+.+|.++|.++ |+++.++.+....+...+.. ..+ ++.. +.+. -.....
T Consensus 26 ~ki~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~tG~h~~~~~~~~-~~~---------~i~~~~~l~----~~~~~~ 90 (396)
T 3dzc_A 26 KKVLIVF-GTRPEAIKMAPLVQQLCQDNRFVAKVCVTGQHREMLDQVL-ELF---------SITPDFDLN----IMEPGQ 90 (396)
T ss_dssp EEEEEEE-CSHHHHHHHHHHHHHHHHCTTEEEEEEECCSSSHHHHHHH-HHT---------TCCCSEECC----CCCTTC
T ss_pred CeEEEEE-eccHhHHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHH-Hhc---------CCCCceeee----cCCCCC
Confidence 7888777 7888888889999999987 79987665544432111110 001 3310 1111 101122
Q ss_pred cHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECC--Cc-chHHHHHHHcCCceEEEeCchHHHHHHHhchhhhh
Q 012083 96 DEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADV--TF-GWALQVAAKLELKKASIYTSAPGILAMIMNIPKFI 172 (471)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~--~~-~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~ 172 (471)
...... ......+.+++++ .+||+|++-. .. .++..+|..+|||++.+....
T Consensus 91 ~~~~~~----~~~~~~l~~~l~~-------~kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~~ag~-------------- 145 (396)
T 3dzc_A 91 TLNGVT----SKILLGMQQVLSS-------EQPDVVLVHGDTATTFAASLAAYYQQIPVGHVEAGL-------------- 145 (396)
T ss_dssp CHHHHH----HHHHHHHHHHHHH-------HCCSEEEEETTSHHHHHHHHHHHTTTCCEEEETCCC--------------
T ss_pred CHHHHH----HHHHHHHHHHHHh-------cCCCEEEEECCchhHHHHHHHHHHhCCCEEEEECCc--------------
Confidence 332211 1223335566666 8999998732 33 345678999999987642110
Q ss_pred hhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhchhhhh-h-C
Q 012083 173 EAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSANK-I-L 250 (471)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~-~-~ 250 (471)
..+... . .+ .....+..+ ...++.+++.+...-+.-... . .
T Consensus 146 -----------------------rs~~~~--~-~~-----~~~~~r~~~------~~~a~~~~~~se~~~~~l~~~G~~~ 188 (396)
T 3dzc_A 146 -----------------------RTGNIY--S-PW-----PEEGNRKLT------AALTQYHFAPTDTSRANLLQENYNA 188 (396)
T ss_dssp -----------------------CCSCTT--S-ST-----THHHHHHHH------HHTCSEEEESSHHHHHHHHHTTCCG
T ss_pred -----------------------cccccc--c-CC-----cHHHHHHHH------HHhcCEEECCCHHHHHHHHHcCCCc
Confidence 000000 0 00 011111111 135778888776543332111 1 2
Q ss_pred CCcceeccccCCCCCCCCCCcC--------cchhccccc-CCCCCcEEEEecCccccCCHHHHHHHHHHHHhC-----CC
Q 012083 251 PSIIPVGPLIANGQPTGNFWSE--------DLTCLSWLD-KQPPGSVIYAAFGSISKLSQQQFNELALGLELA-----GQ 316 (471)
Q Consensus 251 ~~~~~vGp~~~~~~~~~~~~~~--------~~~l~~~l~-~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~-----~~ 316 (471)
.++..+|-...+.. ...+. ..++.+.+. -.+++++|+++.+-....... +..+++|+..+ +.
T Consensus 189 ~ki~vvGn~~~d~~---~~~~~~~~~~~~~~~~~r~~lg~l~~~~~~vlv~~hR~~~~~~~-~~~ll~A~~~l~~~~~~~ 264 (396)
T 3dzc_A 189 ENIFVTGNTVIDAL---LAVREKIHTDMDLQATLESQFPMLDASKKLILVTGHRRESFGGG-FERICQALITTAEQHPEC 264 (396)
T ss_dssp GGEEECCCHHHHHH---HHHHHHHHHCHHHHHHHHHTCTTCCTTSEEEEEECSCBCCCTTH-HHHHHHHHHHHHHHCTTE
T ss_pred CcEEEECCcHHHHH---HHhhhhcccchhhHHHHHHHhCccCCCCCEEEEEECCcccchhH-HHHHHHHHHHHHHhCCCc
Confidence 36788884322210 00000 022223332 123356777776432222222 45666666443 44
Q ss_pred CEEEEEcCCCCCCCCCCCCchhHHh--hCCCcEEEeccch---hhhhccCcceeeeeccCcchhhHhhhcCCceeecccc
Q 012083 317 PFLCGVRPGFINGSSTNNPDGLVAK--VADFGKMVKWAPQ---EKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWG 391 (471)
Q Consensus 317 ~~i~~~~~~~~~~~~~~lp~~~~~~--~~~nv~~~~~vpq---~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~ 391 (471)
++++.++.+ ..+.+.+.+. ..+++++.+++++ ..+++.+++ +|+-.| |.+.||.++|+|+|+..-.
T Consensus 265 ~~v~~~g~~------~~~~~~l~~~~~~~~~v~~~~~lg~~~~~~l~~~ad~--vv~~SG-g~~~EA~a~G~PvV~~~~~ 335 (396)
T 3dzc_A 265 QILYPVHLN------PNVREPVNKLLKGVSNIVLIEPQQYLPFVYLMDRAHI--ILTDSG-GIQEEAPSLGKPVLVMRET 335 (396)
T ss_dssp EEEEECCBC------HHHHHHHHHHTTTCTTEEEECCCCHHHHHHHHHHCSE--EEESCS-GGGTTGGGGTCCEEECCSS
T ss_pred eEEEEeCCC------hHHHHHHHHHHcCCCCEEEeCCCCHHHHHHHHHhcCE--EEECCc-cHHHHHHHcCCCEEEccCC
Confidence 566554422 0011112211 2368888877753 478877777 999987 6667999999999997554
Q ss_pred cchhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHH
Q 012083 392 HDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLK 445 (471)
Q Consensus 392 ~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~ 445 (471)
.++. .+.+ .|.++.+.. +.++|.+++.++++|++.++++.+.+
T Consensus 336 ~~~~----e~v~-~G~~~lv~~------d~~~l~~ai~~ll~d~~~~~~m~~~~ 378 (396)
T 3dzc_A 336 TERP----EAVA-AGTVKLVGT------NQQQICDALSLLLTDPQAYQAMSQAH 378 (396)
T ss_dssp CSCH----HHHH-HTSEEECTT------CHHHHHHHHHHHHHCHHHHHHHHTSC
T ss_pred Ccch----HHHH-cCceEEcCC------CHHHHHHHHHHHHcCHHHHHHHhhcc
Confidence 4543 2345 387766531 68999999999999987766555433
|
| >1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* | Back alignment and structure |
|---|
Probab=99.45 E-value=2.6e-12 Score=125.39 Aligned_cols=320 Identities=12% Similarity=0.019 Sum_probs=170.3
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCC-eEEEEeCCcchh----hhHHhhhcCCCCccCCCCCCeEE-EeCCCCCCCC
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRI-KVTFVTTEFICE----RIKESRQLGSFSEMGDAQQLVRI-VPLPDGLEPE 91 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh-~Vt~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~ 91 (471)
|||+|++ +..++...+..|+++|+++|+ +|.++.+..... ..... ++.+ ..++-. .
T Consensus 1 mkIl~v~-~~~~~~~~~~~l~~~L~~~g~~~~~v~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~--~- 62 (384)
T 1vgv_A 1 MKVLTVF-GTRPEAIKMAPLVHALAKDPFFEAKVCVTAQHREMLDQVLKLF--------------SIVPDYDLNIM--Q- 62 (384)
T ss_dssp CEEEEEE-CSHHHHHHHHHHHHHHHHSTTCEEEEEECCSSGGGGHHHHHHH--------------TCCCSEECCCC--S-
T ss_pred CeEEEEe-cccHHHHHHHHHHHHHHhCCCCceEEEEcCCCHHHHHHHHHHc--------------CCCCCcceecC--C-
Confidence 5999886 456778888999999999994 777654432211 22222 4333 233211 0
Q ss_pred CCcccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCC---cchHHHHHHHcCCceEEEeCchHHHHHHHhch
Q 012083 92 DDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVT---FGWALQVAAKLELKKASIYTSAPGILAMIMNI 168 (471)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~---~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~ 168 (471)
........ .. .....+.+++++ .+||+|++-.. .+.+..+|..+|+|++.+.....
T Consensus 63 -~~~~~~~~---~~-~~~~~l~~~l~~-------~~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~~~~--------- 121 (384)
T 1vgv_A 63 -PGQGLTEI---TC-RILEGLKPILAE-------FKPDVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGLR--------- 121 (384)
T ss_dssp -TTSCHHHH---HH-HHHHHHHHHHHH-------HCCSEEEEETTCHHHHHHHHHHHTTTCCEEEESCCCC---------
T ss_pred -CCccHHHH---HH-HHHHHHHHHHHH-------hCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEecccc---------
Confidence 11122221 11 112234555555 89999998432 22456678889999887432110
Q ss_pred hhhhhhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhchhhh-
Q 012083 169 PKFIEAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSAN- 247 (471)
Q Consensus 169 p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~- 247 (471)
... . +..+ ... ..+.+ ....++.+++.+...-+.-..
T Consensus 122 ----------------------------~~~---~-~~~~----~~~-~~~~~-----~~~~~d~ii~~s~~~~~~l~~~ 159 (384)
T 1vgv_A 122 ----------------------------TGD---L-YSPW----PEE-ANRTL-----TGHLAMYHFSPTETSRQNLLRE 159 (384)
T ss_dssp ----------------------------CSC---T-TSST----THH-HHHHH-----HHTTCSEEEESSHHHHHHHHHT
T ss_pred ----------------------------ccc---c-cCCC----chH-hhHHH-----HHhhccEEEcCcHHHHHHHHHc
Confidence 000 0 0000 000 01110 023588888887655433211
Q ss_pred hh-CCCcceeccccCCCCCCCCCCcC--------cchhccccc-CCCCCcEEEEecCccccCCHHHHHHHHHHHHhC---
Q 012083 248 KI-LPSIIPVGPLIANGQPTGNFWSE--------DLTCLSWLD-KQPPGSVIYAAFGSISKLSQQQFNELALGLELA--- 314 (471)
Q Consensus 248 ~~-~~~~~~vGp~~~~~~~~~~~~~~--------~~~l~~~l~-~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~--- 314 (471)
.. ..++..+|....+.. ...+. ..++.+.+. ..+++++++++.|+...... .+..+++++..+
T Consensus 160 g~~~~~i~vi~n~~~d~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~gr~~~~~k-g~~~li~a~~~l~~~ 235 (384)
T 1vgv_A 160 NVADSRIFITGNTVIDAL---LWVRDQVMSSDKLRSELAANYPFIDPDKKMILVTGHRRESFGR-GFEEICHALADIATT 235 (384)
T ss_dssp TCCGGGEEECCCHHHHHH---HHHHHHTTTCHHHHHHHHTTCTTCCTTSEEEEEECCCBSSCCH-HHHHHHHHHHHHHHH
T ss_pred CCChhhEEEeCChHHHHH---HhhhhccccchhhhHHHHHhccccCCCCCEEEEEeCCccccch-HHHHHHHHHHHHHhh
Confidence 11 124555653321100 00000 012223322 21335678888887643322 344455555332
Q ss_pred --CCCEEEEEcCCCCCCCCCCCCchhHHhh--CCCcEEEeccch---hhhhccCcceeeeeccCcchhhHhhhcCCceee
Q 012083 315 --GQPFLCGVRPGFINGSSTNNPDGLVAKV--ADFGKMVKWAPQ---EKVLAHPSVACYLTHCGWNSTMEGISMGVPFLC 387 (471)
Q Consensus 315 --~~~~i~~~~~~~~~~~~~~lp~~~~~~~--~~nv~~~~~vpq---~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~ 387 (471)
+.++++..++. ..+.+.+.+.. .+++.+.+++++ ..+++.+++ ||+.+|. .+.||+++|+|+|+
T Consensus 236 ~~~~~l~i~~g~~------~~~~~~l~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~~Sg~-~~lEA~a~G~PvI~ 306 (384)
T 1vgv_A 236 HQDIQIVYPVHLN------PNVREPVNRILGHVKNVILIDPQEYLPFVWLMNHAWL--ILTDSGG-IQEEAPSLGKPVLV 306 (384)
T ss_dssp CTTEEEEEECCBC------HHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHCSE--EEESSST-GGGTGGGGTCCEEE
T ss_pred CCCeEEEEEcCCC------HHHHHHHHHHhhcCCCEEEeCCCCHHHHHHHHHhCcE--EEECCcc-hHHHHHHcCCCEEE
Confidence 34555533321 00111222211 368888777764 467877777 9988854 48899999999999
Q ss_pred cccccchhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHH
Q 012083 388 WPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNAL 442 (471)
Q Consensus 388 ~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~ 442 (471)
.+...+.. .+.+ .|.|..++ . +.++|.++|.++++|++.+++..
T Consensus 307 ~~~~~~~~----e~v~-~g~g~lv~----~--d~~~la~~i~~ll~d~~~~~~~~ 350 (384)
T 1vgv_A 307 MRDTTERP----EAVT-AGTVRLVG----T--DKQRIVEEVTRLLKDENEYQAMS 350 (384)
T ss_dssp ESSCCSCH----HHHH-HTSEEEEC----S--SHHHHHHHHHHHHHCHHHHHHHH
T ss_pred ccCCCCcc----hhhh-CCceEEeC----C--CHHHHHHHHHHHHhChHHHhhhh
Confidence 98744332 3455 38888884 2 88999999999999986655443
|
| >3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=5.3e-11 Score=117.97 Aligned_cols=364 Identities=12% Similarity=0.006 Sum_probs=179.3
Q ss_pred CCcEEEEEcCC-----CcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHH------hhhcCCCCccCCCCCCeEEEeC
Q 012083 16 TNVHVLLVSFP-----AQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKE------SRQLGSFSEMGDAQQLVRIVPL 84 (471)
Q Consensus 16 ~~~~Il~~~~~-----~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~~~ 84 (471)
|+|||++++.. ..|--.-+..|+++|+++||+|+++++......-.. .+............+|+.+..+
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~ 80 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRI 80 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEEE
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEEEe
Confidence 46899999833 456667789999999999999999995432211000 0000000000001237777766
Q ss_pred CCCCCCC-CCcccHHHH-HHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcc--hHHHHHHHcCCceEEEeCchHH
Q 012083 85 PDGLEPE-DDRKDEAKM-TRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFG--WALQVAAKLELKKASIYTSAPG 160 (471)
Q Consensus 85 ~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~--~~~~~A~~lgiP~v~~~~~~~~ 160 (471)
+...... ......... ...+. .....+..++..+.... .+||+|.+..... .+..++...++|+|........
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~Dii~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~ 157 (439)
T 3fro_A 81 GGGLLDSEDVYGPGWDGLIRKAV-TFGRASVLLLNDLLREE--PLPDVVHFHDWHTVFAGALIKKYFKIPAVFTIHRLNK 157 (439)
T ss_dssp ESGGGGCSSTTCSHHHHHHHHHH-HHHHHHHHHHHHHTTTS--CCCSEEEEESGGGHHHHHHHHHHHCCCEEEEESCCCC
T ss_pred cchhccccccccCCcchhhhhhH-HHHHHHHHHHHHHhccC--CCCeEEEecchhhhhhHHHHhhccCCCEEEEeccccc
Confidence 5411111 111111111 22211 12222334444441111 7999999876543 3456778889999886543321
Q ss_pred HHHHHhchhhhhhhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchh
Q 012083 161 ILAMIMNIPKFIEAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFH 240 (471)
Q Consensus 161 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~ 240 (471)
. . ++.... ....+. .+. ... .....+. .+..++.+++.|..
T Consensus 158 ~-----~--------------~~~~~~---~~~~~~-----~~~--~~~----~~~~~~~------~~~~ad~ii~~S~~ 198 (439)
T 3fro_A 158 S-----K--------------LPAFYF---HEAGLS-----ELA--PYP----DIDPEHT------GGYIADIVTTVSRG 198 (439)
T ss_dssp C-----C--------------EEHHHH---HHTTCG-----GGC--CSS----EECHHHH------HHHHCSEEEESCHH
T ss_pred c-----c--------------CchHHh---Cccccc-----ccc--ccc----eeeHhhh------hhhhccEEEecCHH
Confidence 0 0 000000 000000 000 000 0001111 23578999998876
Q ss_pred hhchhhhh----hCCCcceeccccCCCCCCCCCC-----cCcchhcccccCCCCCcEEEEecCccc--cCCHHHHHHHHH
Q 012083 241 ELAPSANK----ILPSIIPVGPLIANGQPTGNFW-----SEDLTCLSWLDKQPPGSVIYAAFGSIS--KLSQQQFNELAL 309 (471)
Q Consensus 241 ~l~~~~~~----~~~~~~~vGp~~~~~~~~~~~~-----~~~~~l~~~l~~~~~~~vv~vs~GS~~--~~~~~~~~~~~~ 309 (471)
..+.. .. ...++..|..-.....-..... .....+.+-+.-. ++ .+++..|+.. ....+.+-..+.
T Consensus 199 ~~~~~-~~~~~~~~~~i~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~i~~~G~~~~~~Kg~~~li~a~~ 275 (439)
T 3fro_A 199 YLIDE-WGFFRNFEGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFGMD-EG-VTFMFIGRFDRGQKGVDVLLKAIE 275 (439)
T ss_dssp HHHHT-HHHHGGGTTSEEECCCCCCTTTSCGGGSCSCHHHHHHHHHHHHTCC-SC-EEEEEECCSSCTTBCHHHHHHHHH
T ss_pred HHHHH-hhhhhhcCCceeecCCCCCchhcCcccccchhhhhHHHHHHHcCCC-CC-cEEEEEcccccccccHHHHHHHHH
Confidence 65542 22 1334444433221111000000 0111222222222 23 7777788865 233444444444
Q ss_pred HHHh----CCCCEEEEEcCCCCCCCCC--CCCchhHHhhCCCcEEEeccchh---hhhccCcceeeeec----cCcchhh
Q 012083 310 GLEL----AGQPFLCGVRPGFINGSST--NNPDGLVAKVADFGKMVKWAPQE---KVLAHPSVACYLTH----CGWNSTM 376 (471)
Q Consensus 310 al~~----~~~~~i~~~~~~~~~~~~~--~lp~~~~~~~~~nv~~~~~vpq~---~lL~~~~~~~~ItH----gG~~s~~ 376 (471)
.+.. .+.++++ ++.. ... ..-....++.++++.+.+|+|+. .+++.+++ +|.- |-.+++.
T Consensus 276 ~l~~~~~~~~~~l~i-~G~g----~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~ 348 (439)
T 3fro_A 276 ILSSKKEFQEMRFII-IGKG----DPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVAL 348 (439)
T ss_dssp HHHTSGGGGGEEEEE-ECCC----CHHHHHHHHHHHHHCTTEEEECSCCCHHHHHHHHTTCSE--EEECBSCCSSCHHHH
T ss_pred HHHhcccCCCeEEEE-EcCC----ChhHHHHHHHHHhhcCCEEEEcCCCCHHHHHHHHHHCCE--EEeCCCCCCccHHHH
Confidence 4443 2334443 3322 000 00011222335445566999985 57877776 6633 4457999
Q ss_pred HhhhcCCceeecccccchhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhC-cHHHHHHHH
Q 012083 377 EGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLS-NDVVRKNAL 442 (471)
Q Consensus 377 eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~-~~~~~~~a~ 442 (471)
||+++|+|+|+... ......+.. |.|..+++ -+.+++.++|.++++ |++.+++..
T Consensus 349 EAma~G~Pvi~s~~----~~~~e~~~~--~~g~~~~~-----~d~~~la~~i~~ll~~~~~~~~~~~ 404 (439)
T 3fro_A 349 EAMCLGAIPIASAV----GGLRDIITN--ETGILVKA-----GDPGELANAILKALELSRSDLSKFR 404 (439)
T ss_dssp HHHHTTCEEEEESS----THHHHHCCT--TTCEEECT-----TCHHHHHHHHHHHHHHTTTTTHHHH
T ss_pred HHHHCCCCeEEcCC----CCcceeEEc--CceEEeCC-----CCHHHHHHHHHHHHhcCHHHHHHHH
Confidence 99999999998743 334444433 78888853 478999999999998 764444333
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* | Back alignment and structure |
|---|
Probab=99.37 E-value=1.1e-10 Score=114.47 Aligned_cols=316 Identities=10% Similarity=0.044 Sum_probs=166.5
Q ss_pred CcEEEEEcCC---C-cccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCC
Q 012083 17 NVHVLLVSFP---A-QGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPED 92 (471)
Q Consensus 17 ~~~Il~~~~~---~-~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 92 (471)
+|||+|+... . .|.-..+..++++|.++||+|++++............ ...+ ++..++.. .
T Consensus 20 ~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~----------~~~~-~~~~~~~~----~ 84 (406)
T 2gek_A 20 HMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDYV----------VSGG-KAVPIPYN----G 84 (406)
T ss_dssp -CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCCCTTE----------EECC-CCC----------
T ss_pred cceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCccccCCccc----------ccCC-cEEecccc----C
Confidence 5999999842 2 5677889999999999999999999875533111100 0001 11111100 0
Q ss_pred CcccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcc--hHHHHHHHcCCceEEEeCchHHHHHHHhchhh
Q 012083 93 DRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFG--WALQVAAKLELKKASIYTSAPGILAMIMNIPK 170 (471)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~ 170 (471)
....+ .+.......+.+++++ .+||+|++..... .+..++...++|+|.........
T Consensus 85 ---~~~~~--~~~~~~~~~l~~~l~~-------~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~--------- 143 (406)
T 2gek_A 85 ---SVARL--RFGPATHRKVKKWIAE-------GDFDVLHIHEPNAPSLSMLALQAAEGPIVATFHTSTTK--------- 143 (406)
T ss_dssp -----------CCHHHHHHHHHHHHH-------HCCSEEEEECCCSSSHHHHHHHHEESSEEEEECCCCCS---------
T ss_pred ---Ccccc--cccHHHHHHHHHHHHh-------cCCCEEEECCccchHHHHHHHHhcCCCEEEEEcCcchh---------
Confidence 00000 0000011224444444 7999999876544 34566777899999864321100
Q ss_pred hhhhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHH-hhhccCcEEEEcchhhhchhhhhh
Q 012083 171 FIEAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIR-QNIEASDRILCTWFHELAPSANKI 249 (471)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~s~~~l~~~~~~~ 249 (471)
......+.+.. ..+..++.+++.+....+.-...+
T Consensus 144 --------------------------------------------~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~ 179 (406)
T 2gek_A 144 --------------------------------------------SLTLSVFQGILRPYHEKIIGRIAVSDLARRWQMEAL 179 (406)
T ss_dssp --------------------------------------------HHHHHHHHSTTHHHHTTCSEEEESSHHHHHHHHHHH
T ss_pred --------------------------------------------hhhHHHHHHHHHHHHhhCCEEEECCHHHHHHHHHhc
Confidence 00000011111 224678888888876654432222
Q ss_pred C-CCcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCcc-cc-CCHHHHHHHHHHHHhC--CCCEEEEEcC
Q 012083 250 L-PSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSI-SK-LSQQQFNELALGLELA--GQPFLCGVRP 324 (471)
Q Consensus 250 ~-~~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~-~~-~~~~~~~~~~~al~~~--~~~~i~~~~~ 324 (471)
. +++ .|......... ....... .... +..+++..|+. .. ...+.+...+..+.+. +.+++ .++.
T Consensus 180 ~~~~~-vi~~~v~~~~~--~~~~~~~------~~~~-~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~l~-i~G~ 248 (406)
T 2gek_A 180 GSDAV-EIPNGVDVASF--ADAPLLD------GYPR-EGRTVLFLGRYDEPRKGMAVLLAALPKLVARFPDVEIL-IVGR 248 (406)
T ss_dssp SSCEE-ECCCCBCHHHH--HTCCCCT------TCSC-SSCEEEEESCTTSGGGCHHHHHHHHHHHHTTSTTCEEE-EESC
T ss_pred CCCcE-EecCCCChhhc--CCCchhh------hccC-CCeEEEEEeeeCccccCHHHHHHHHHHHHHHCCCeEEE-EEcC
Confidence 2 233 33322111000 0000000 0001 12566667775 22 2233333333333222 34444 3443
Q ss_pred CCCCCCCCCCCchhHHh---hCCCcEEEeccchh---hhhccCcceeeeec----cC-cchhhHhhhcCCceeecccccc
Q 012083 325 GFINGSSTNNPDGLVAK---VADFGKMVKWAPQE---KVLAHPSVACYLTH----CG-WNSTMEGISMGVPFLCWPWGHD 393 (471)
Q Consensus 325 ~~~~~~~~~lp~~~~~~---~~~nv~~~~~vpq~---~lL~~~~~~~~ItH----gG-~~s~~eal~~GvP~l~~P~~~D 393 (471)
. . . +.+.+. ..+++.+.+++|+. .+++.+++ +|.- .| .+++.||+++|+|+|+.+.
T Consensus 249 ~----~---~-~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~--- 315 (406)
T 2gek_A 249 G----D---E-DELREQAGDLAGHLRFLGQVDDATKASAMRSADV--YCAPHLGGESFGIVLVEAMAAGTAVVASDL--- 315 (406)
T ss_dssp S----C---H-HHHHHHTGGGGGGEEECCSCCHHHHHHHHHHSSE--EEECCCSCCSSCHHHHHHHHHTCEEEECCC---
T ss_pred C----c---H-HHHHHHHHhccCcEEEEecCCHHHHHHHHHHCCE--EEecCCCCCCCchHHHHHHHcCCCEEEecC---
Confidence 3 1 1 233222 25788999999974 78877887 5533 34 4489999999999999855
Q ss_pred hhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHH
Q 012083 394 HLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALK 443 (471)
Q Consensus 394 Q~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~ 443 (471)
......+.+ -+.|..++. -+.+++.++|.++++|++.+++..+
T Consensus 316 -~~~~e~i~~-~~~g~~~~~-----~d~~~l~~~i~~l~~~~~~~~~~~~ 358 (406)
T 2gek_A 316 -DAFRRVLAD-GDAGRLVPV-----DDADGMAAALIGILEDDQLRAGYVA 358 (406)
T ss_dssp -HHHHHHHTT-TTSSEECCT-----TCHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred -CcHHHHhcC-CCceEEeCC-----CCHHHHHHHHHHHHcCHHHHHHHHH
Confidence 445556666 367887743 3789999999999999865554433
|
| >3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A | Back alignment and structure |
|---|
Probab=99.36 E-value=2.7e-11 Score=117.63 Aligned_cols=325 Identities=12% Similarity=0.014 Sum_probs=167.0
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhC-C-CeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEE-EeCCCCCCCCCC
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADC-R-IKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRI-VPLPDGLEPEDD 93 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~r-G-h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~ 93 (471)
+|||++++ ++.++......++++|+++ | |+|+++++....+........ . ++.. ..++... .
T Consensus 8 ~mkIl~v~-~~~~~~~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~-~---------~~~~~~~~~~~~----~ 72 (375)
T 3beo_A 8 RLKVMTIF-GTRPEAIKMAPLVLELQKHPEKIESIVTVTAQHRQMLDQVLSI-F---------GITPDFDLNIMK----D 72 (375)
T ss_dssp CEEEEEEE-CSHHHHHHHHHHHHHHTTCTTTEEEEEEECCSSSHHHHHHHHH-H---------TCCCSEECCCCC----T
T ss_pred CceEEEEe-cCcHHHHHHHHHHHHHHhCCCCCCeEEEEcCCCHHHHHHHHHH-c---------CCCCccccccCC----C
Confidence 48999997 4577888889999999987 5 888877765443322211000 0 2221 1221110 1
Q ss_pred cccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcc---hHHHHHHHcCCceEEEeCchHHHHHHHhchhh
Q 012083 94 RKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFG---WALQVAAKLELKKASIYTSAPGILAMIMNIPK 170 (471)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~---~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~ 170 (471)
..+...... .....+.+++++ .+||+|++..... .+..+|...|+|++.+....
T Consensus 73 ~~~~~~~~~----~~~~~l~~~l~~-------~~pDvv~~~~~~~~~~~~~~~~~~~~ip~v~~~~~~------------ 129 (375)
T 3beo_A 73 RQTLIDITT----RGLEGLDKVMKE-------AKPDIVLVHGDTTTTFIASLAAFYNQIPVGHVEAGL------------ 129 (375)
T ss_dssp TCCHHHHHH----HHHHHHHHHHHH-------HCCSEEEEETTSHHHHHHHHHHHHTTCCEEEESCCC------------
T ss_pred cccHHHHHH----HHHHHHHHHHHH-------hCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEeccc------------
Confidence 111111111 111224455555 8999999853222 34467788999998642110
Q ss_pred hhhhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhchhhh-hh
Q 012083 171 FIEAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSAN-KI 249 (471)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~-~~ 249 (471)
..... . ..+ ........+ ...++.+++.+...-+.-.. ..
T Consensus 130 -------------------------~~~~~--~--~~~----~~~~~~~~~------~~~~d~ii~~s~~~~~~~~~~g~ 170 (375)
T 3beo_A 130 -------------------------RTWDK--Y--SPY----PEEMNRQLT------GVMADLHFSPTAKSATNLQKENK 170 (375)
T ss_dssp -------------------------CCSCT--T--SST----THHHHHHHH------HHHCSEEEESSHHHHHHHHHTTC
T ss_pred -------------------------ccccc--c--CCC----hhHhhhhHH------hhhhheeeCCCHHHHHHHHHcCC
Confidence 00000 0 000 011111111 12478888887765443211 11
Q ss_pred C-CCcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHHHHhC-----CCCEEEEEc
Q 012083 250 L-PSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELA-----GQPFLCGVR 323 (471)
Q Consensus 250 ~-~~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~-----~~~~i~~~~ 323 (471)
. .++..+|....+............++.+-+ +++++++++.|...... ..+..+++++..+ +.++++ +
T Consensus 171 ~~~~i~vi~n~~~d~~~~~~~~~~~~~~~~~~---~~~~~vl~~~gr~~~~~-K~~~~li~a~~~l~~~~~~~~~i~--~ 244 (375)
T 3beo_A 171 DESRIFITGNTAIDALKTTVKETYSHPVLEKL---GNNRLVLMTAHRRENLG-EPMRNMFRAIKRLVDKHEDVQVVY--P 244 (375)
T ss_dssp CGGGEEECCCHHHHHHHHHCCSSCCCHHHHTT---TTSEEEEEECCCGGGTT-HHHHHHHHHHHHHHHHCTTEEEEE--E
T ss_pred CcccEEEECChhHhhhhhhhhhhhhHHHHHhc---cCCCeEEEEecccccch-hHHHHHHHHHHHHHhhCCCeEEEE--e
Confidence 1 245556533111000000000111111112 23457778888754322 2345566665432 334443 3
Q ss_pred CCCCCCCCCCCCchhHHhhC--CCcEEEeccchh---hhhccCcceeeeeccCcchhhHhhhcCCceeecccccchhhhH
Q 012083 324 PGFINGSSTNNPDGLVAKVA--DFGKMVKWAPQE---KVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIK 398 (471)
Q Consensus 324 ~~~~~~~~~~lp~~~~~~~~--~nv~~~~~vpq~---~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na 398 (471)
.. ....+.+.+.+... +++.+.+++++. .+++.+++ ||+.+| +.+.||+++|+|+|+.......
T Consensus 245 ~g----~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~---- 313 (375)
T 3beo_A 245 VH----MNPVVRETANDILGDYGRIHLIEPLDVIDFHNVAARSYL--MLTDSG-GVQEEAPSLGVPVLVLRDTTER---- 313 (375)
T ss_dssp CC----SCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTCSE--EEECCH-HHHHHHHHHTCCEEECSSCCSC----
T ss_pred CC----CCHHHHHHHHHHhhccCCEEEeCCCCHHHHHHHHHhCcE--EEECCC-ChHHHHHhcCCCEEEecCCCCC----
Confidence 22 00001111222223 689987877754 67877776 888864 4588999999999988543332
Q ss_pred HHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHH
Q 012083 399 SCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNAL 442 (471)
Q Consensus 399 ~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~ 442 (471)
..+.+ .|.|..++ . +.++|.++|.++++|++.+++..
T Consensus 314 ~e~v~-~g~g~~v~-----~-d~~~la~~i~~ll~~~~~~~~~~ 350 (375)
T 3beo_A 314 PEGIE-AGTLKLAG-----T-DEETIFSLADELLSDKEAHDKMS 350 (375)
T ss_dssp HHHHH-TTSEEECC-----S-CHHHHHHHHHHHHHCHHHHHHHC
T ss_pred ceeec-CCceEEcC-----C-CHHHHHHHHHHHHhChHhHhhhh
Confidence 22345 38888773 2 78999999999999987665543
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* | Back alignment and structure |
|---|
Probab=99.33 E-value=2.9e-11 Score=115.96 Aligned_cols=133 Identities=14% Similarity=0.101 Sum_probs=84.6
Q ss_pred EEEecCccccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCCchhHHhhCCCcEEEeccchh---hhhccCccee
Q 012083 289 IYAAFGSISKLSQQQFNELALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQE---KVLAHPSVAC 365 (471)
Q Consensus 289 v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~---~lL~~~~~~~ 365 (471)
+++..|+.. ....+..++++++.++.+++++-.+. ....+ ..+.++..+|+.+.+|+|+. .+++.+++
T Consensus 164 ~i~~vG~~~--~~Kg~~~li~a~~~~~~~l~i~G~g~----~~~~l-~~~~~~~~~~v~~~g~~~~~~l~~~~~~adv-- 234 (342)
T 2iuy_A 164 FLLFMGRVS--PHKGALEAAAFAHACGRRLVLAGPAW----EPEYF-DEITRRYGSTVEPIGEVGGERRLDLLASAHA-- 234 (342)
T ss_dssp CEEEESCCC--GGGTHHHHHHHHHHHTCCEEEESCCC----CHHHH-HHHHHHHTTTEEECCCCCHHHHHHHHHHCSE--
T ss_pred EEEEEeccc--cccCHHHHHHHHHhcCcEEEEEeCcc----cHHHH-HHHHHHhCCCEEEeccCCHHHHHHHHHhCCE--
Confidence 344567653 23345667777777777766543221 00001 12333345899999999975 78877777
Q ss_pred ee--ec------------cCcchhhHhhhcCCceeecccccchhhhHHHHHh--hhcceeeecCCCCCCcCHhHHHHHHH
Q 012083 366 YL--TH------------CGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICD--DWKIGLWLEPDDNGIIGRHEIKRKVD 429 (471)
Q Consensus 366 ~I--tH------------gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~--~~G~G~~~~~~~~~~~~~~~l~~~i~ 429 (471)
+| +. |-.+++.||+++|+|+|+... ..+...+.+ . +.|..+ .. +.+++.++|.
T Consensus 235 ~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~----~~~~e~~~~~~~-~~g~~~-----~~-d~~~l~~~i~ 303 (342)
T 2iuy_A 235 VLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGN----GCLAEIVPSVGE-VVGYGT-----DF-APDEARRTLA 303 (342)
T ss_dssp EEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCT----TTHHHHGGGGEE-ECCSSS-----CC-CHHHHHHHHH
T ss_pred EEECCcccccccccccccCccHHHHHHHhcCCCEEEcCC----CChHHHhcccCC-CceEEc-----CC-CHHHHHHHHH
Confidence 55 32 334689999999999999865 334444444 2 466666 34 8899999999
Q ss_pred HHhCcHHHHHHHHHHH
Q 012083 430 ELLSNDVVRKNALKLK 445 (471)
Q Consensus 430 ~ll~~~~~~~~a~~l~ 445 (471)
++++ .+++++..
T Consensus 304 ~l~~----~~~~~~~~ 315 (342)
T 2iuy_A 304 GLPA----SDEVRRAA 315 (342)
T ss_dssp TSCC----HHHHHHHH
T ss_pred HHHH----HHHHHHHH
Confidence 9997 44554443
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* | Back alignment and structure |
|---|
Probab=99.30 E-value=3.3e-09 Score=103.62 Aligned_cols=325 Identities=13% Similarity=0.091 Sum_probs=169.1
Q ss_pred CcEEEEEcCCC-cccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCCcc
Q 012083 17 NVHVLLVSFPA-QGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDDRK 95 (471)
Q Consensus 17 ~~~Il~~~~~~-~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 95 (471)
+.++....+|. .|.-..+..|+++|+++||+|++++...... .. ...+++.+..++.........
T Consensus 15 ~~~~~~~~~p~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~-~~------------~~~~~i~~~~~~~~~~~~~~~- 80 (394)
T 2jjm_A 15 KLKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGLPFR-LN------------KVYPNIYFHEVTVNQYSVFQY- 80 (394)
T ss_dssp CCEEEEECCC--CHHHHHHHHHHHHHHHTTCEEEEECSSCC-----------------CCCTTEEEECCCCC----CCS-
T ss_pred eeeeehhcCCCCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCc-cc------------ccCCceEEEeccccccccccc-
Confidence 67888887775 4577788899999999999999998854321 11 112377776654321110000
Q ss_pred cHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcc--hHHHHHHH-c--CCceEEEeCchHHHHHHHhchhh
Q 012083 96 DEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFG--WALQVAAK-L--ELKKASIYTSAPGILAMIMNIPK 170 (471)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~--~~~~~A~~-l--giP~v~~~~~~~~~~~~~~~~p~ 170 (471)
.... +. ....+.+++++ .+||+|++..... ....++.. + ++|+|.........
T Consensus 81 ~~~~-~~-----~~~~l~~~l~~-------~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~--------- 138 (394)
T 2jjm_A 81 PPYD-LA-----LASKMAEVAQR-------ENLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDIT--------- 138 (394)
T ss_dssp CCHH-HH-----HHHHHHHHHHH-------HTCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHH---------
T ss_pred cccc-HH-----HHHHHHHHHHH-------cCCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCccc---------
Confidence 0000 00 11223444554 7999999875433 22334443 3 59988765432110
Q ss_pred hhhhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhchhhhhh-
Q 012083 171 FIEAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSANKI- 249 (471)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~- 249 (471)
. .+.. .. .....+ ..+..++.+++.|....+.-....
T Consensus 139 --------------------~-~~~~---------~~------~~~~~~------~~~~~ad~ii~~s~~~~~~~~~~~~ 176 (394)
T 2jjm_A 139 --------------------V-LGSD---------PS------LNNLIR------FGIEQSDVVTAVSHSLINETHELVK 176 (394)
T ss_dssp --------------------T-TTTC---------TT------THHHHH------HHHHHSSEEEESCHHHHHHHHHHTC
T ss_pred --------------------c-cCCC---------HH------HHHHHH------HHHhhCCEEEECCHHHHHHHHHhhC
Confidence 0 0000 00 000111 123578999998877655431111
Q ss_pred -CCCcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCcccc-CCHHHHHHHHHHHHh-CCCCEEEEEcCCC
Q 012083 250 -LPSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISK-LSQQQFNELALGLEL-AGQPFLCGVRPGF 326 (471)
Q Consensus 250 -~~~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~-~~~~~~~~~~~al~~-~~~~~i~~~~~~~ 326 (471)
..++..+......... .......+.+-+...+ +..+++..|+... ...+.+-..+..+.+ .+.+++ .++..
T Consensus 177 ~~~~~~vi~ngv~~~~~---~~~~~~~~~~~~~~~~-~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~l~-i~G~g- 250 (394)
T 2jjm_A 177 PNKDIQTVYNFIDERVY---FKRDMTQLKKEYGISE-SEKILIHISNFRKVKRVQDVVQAFAKIVTEVDAKLL-LVGDG- 250 (394)
T ss_dssp CSSCEEECCCCCCTTTC---CCCCCHHHHHHTTCC----CEEEEECCCCGGGTHHHHHHHHHHHHHSSCCEEE-EECCC-
T ss_pred CcccEEEecCCccHHhc---CCcchHHHHHHcCCCC-CCeEEEEeeccccccCHHHHHHHHHHHHhhCCCEEE-EECCc-
Confidence 2355555433322110 0011112222222112 2356666787632 223333333333322 244444 34432
Q ss_pred CCCCCCCCCchhHHh---h--CCCcEEEeccch-hhhhccCcceeee----eccCcchhhHhhhcCCceeecccccchhh
Q 012083 327 INGSSTNNPDGLVAK---V--ADFGKMVKWAPQ-EKVLAHPSVACYL----THCGWNSTMEGISMGVPFLCWPWGHDHLY 396 (471)
Q Consensus 327 ~~~~~~~lp~~~~~~---~--~~nv~~~~~vpq-~~lL~~~~~~~~I----tHgG~~s~~eal~~GvP~l~~P~~~DQ~~ 396 (471)
...+.+.+. . .+++.+.++..+ ..+++.+++ +| .-|..+++.||+++|+|+|+.+.. .
T Consensus 251 ------~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~PvI~~~~~----~ 318 (394)
T 2jjm_A 251 ------PEFCTILQLVKNLHIEDRVLFLGKQDNVAELLAMSDL--MLLLSEKESFGLVLLEAMACGVPCIGTRVG----G 318 (394)
T ss_dssp ------TTHHHHHHHHHTTTCGGGBCCCBSCSCTHHHHHTCSE--EEECCSCCSCCHHHHHHHHTTCCEEEECCT----T
T ss_pred ------hHHHHHHHHHHHcCCCCeEEEeCchhhHHHHHHhCCE--EEeccccCCCchHHHHHHhcCCCEEEecCC----C
Confidence 111222221 1 367888887554 368877776 77 456677999999999999998653 2
Q ss_pred hHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHH
Q 012083 397 IKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALK 443 (471)
Q Consensus 397 na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~ 443 (471)
....+.+ -+.|..++. -+.+++.++|.++++|++.+++..+
T Consensus 319 ~~e~v~~-~~~g~~~~~-----~d~~~la~~i~~l~~~~~~~~~~~~ 359 (394)
T 2jjm_A 319 IPEVIQH-GDTGYLCEV-----GDTTGVADQAIQLLKDEELHRNMGE 359 (394)
T ss_dssp STTTCCB-TTTEEEECT-----TCHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred hHHHhhc-CCceEEeCC-----CCHHHHHHHHHHHHcCHHHHHHHHH
Confidence 3334444 257887753 3789999999999999865544433
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* | Back alignment and structure |
|---|
Probab=99.29 E-value=1.1e-09 Score=105.94 Aligned_cols=159 Identities=14% Similarity=0.100 Sum_probs=98.6
Q ss_pred cEEEEecCccccCCHHHHHHHHHHHHhCCC----C-EEEEEcCCCCCCCCCCCCchhHH---hh--CCCcEEEeccch-h
Q 012083 287 SVIYAAFGSISKLSQQQFNELALGLELAGQ----P-FLCGVRPGFINGSSTNNPDGLVA---KV--ADFGKMVKWAPQ-E 355 (471)
Q Consensus 287 ~vv~vs~GS~~~~~~~~~~~~~~al~~~~~----~-~i~~~~~~~~~~~~~~lp~~~~~---~~--~~nv~~~~~vpq-~ 355 (471)
+.+++..|+... ...+..+++++..... . -++.++.. . .+.+.+ +. .+|+.+.++..+ .
T Consensus 196 ~~~i~~~G~~~~--~K~~~~li~a~~~l~~~~~~~~~l~i~G~g----~----~~~~~~~~~~~~~~~~v~~~g~~~~~~ 265 (374)
T 2iw1_A 196 QNLLLQVGSDFG--RKGVDRSIEALASLPESLRHNTLLFVVGQD----K----PRKFEALAEKLGVRSNVHFFSGRNDVS 265 (374)
T ss_dssp CEEEEEECSCTT--TTTHHHHHHHHHTSCHHHHHTEEEEEESSS----C----CHHHHHHHHHHTCGGGEEEESCCSCHH
T ss_pred CeEEEEeccchh--hcCHHHHHHHHHHhHhccCCceEEEEEcCC----C----HHHHHHHHHHcCCCCcEEECCCcccHH
Confidence 467777787533 2335556667665432 2 23444432 1 122222 22 478888888654 3
Q ss_pred hhhccCcceeeee----ccCcchhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHH
Q 012083 356 KVLAHPSVACYLT----HCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDEL 431 (471)
Q Consensus 356 ~lL~~~~~~~~It----HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~l 431 (471)
.+++.+++ +|. -|..+++.||+++|+|+|+... ..+...+.+ -+.|..+. ..-+.+++.++|.++
T Consensus 266 ~~~~~ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i~~-~~~g~~~~----~~~~~~~l~~~i~~l 334 (374)
T 2iw1_A 266 ELMAAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAV----CGYAHYIAD-ANCGTVIA----EPFSQEQLNEVLRKA 334 (374)
T ss_dssp HHHHHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETT----STTTHHHHH-HTCEEEEC----SSCCHHHHHHHHHHH
T ss_pred HHHHhcCE--EEeccccCCcccHHHHHHHCCCCEEEecC----CCchhhhcc-CCceEEeC----CCCCHHHHHHHHHHH
Confidence 68877777 665 4667899999999999999754 345667777 48898885 234789999999999
Q ss_pred hCcHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHH
Q 012083 432 LSNDVVRKNALKLKELAQKSVTKEGSSSKNLEYFIK 467 (471)
Q Consensus 432 l~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~ 467 (471)
++|++.+++..+-+.+..+.. .-.+..+.+.++++
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~ 369 (374)
T 2iw1_A 335 LTQSPLRMAWAENARHYADTQ-DLYSLPEKAADIIT 369 (374)
T ss_dssp HHCHHHHHHHHHHHHHHHHHS-CCSCHHHHHHHHHH
T ss_pred HcChHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHH
Confidence 999876655554444443321 11333444444443
|
| >4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii} | Back alignment and structure |
|---|
Probab=99.28 E-value=2.9e-11 Score=117.41 Aligned_cols=317 Identities=14% Similarity=0.058 Sum_probs=172.3
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchh-hhHHhhhcCCCCccCCCCCCeEEEeCCC-CCCCCCCcc
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICE-RIKESRQLGSFSEMGDAQQLVRIVPLPD-GLEPEDDRK 95 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~ 95 (471)
.|++++. |++-.+.=+.+|.++|.++ +++.++.+....+ ...+.... ++.+. -|+ .+.. ...
T Consensus 10 ~~~~~v~-GtRpe~~k~~p~~~~l~~~-~~~~~~~tgqh~~~~~~~~~~~-----------~~~i~-~~~~~l~~--~~~ 73 (385)
T 4hwg_A 10 LKVMTIV-GTRPELIKLCCVISEFDKH-TKHILVHTGQNYAYELNQVFFD-----------DMGIR-KPDYFLEV--AAD 73 (385)
T ss_dssp CEEEEEE-CSHHHHHHHHHHHHHHHHH-SEEEEEECSCHHHHHHTHHHHC------------CCCC-CCSEECCC--CCC
T ss_pred hheeEEE-EcCHhHHHHHHHHHHHHhc-CCEEEEEeCCCCChhHHHHHHh-----------hCCCC-CCceecCC--CCC
Confidence 7887765 8999999999999999987 9988877765544 23221111 22220 111 0111 122
Q ss_pred cHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEE--CCCcchHHHHHHHcCCceEEEeCchHHHHHHHhchhhhhh
Q 012083 96 DEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIA--DVTFGWALQVAAKLELKKASIYTSAPGILAMIMNIPKFIE 173 (471)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~--D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~ 173 (471)
+..+.. ......+++++++ .+||+|++ |....++..+|.++|||++.+....
T Consensus 74 ~~~~~~----~~~~~~l~~~l~~-------~kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~eagl--------------- 127 (385)
T 4hwg_A 74 NTAKSI----GLVIEKVDEVLEK-------EKPDAVLFYGDTNSCLSAIAAKRRKIPIFHMEAGN--------------- 127 (385)
T ss_dssp CSHHHH----HHHHHHHHHHHHH-------HCCSEEEEESCSGGGGGHHHHHHTTCCEEEESCCC---------------
T ss_pred CHHHHH----HHHHHHHHHHHHh-------cCCcEEEEECCchHHHHHHHHHHhCCCEEEEeCCC---------------
Confidence 222222 2233346666666 89999886 3334445889999999976643210
Q ss_pred hCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhchhhhh-h-CC
Q 012083 174 AGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSANK-I-LP 251 (471)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~-~-~~ 251 (471)
..... .++ ....+..+. ..++.+++.+...-+.-... . ..
T Consensus 128 ----------------------rs~~~-~~p---------ee~nR~~~~------~~a~~~~~~te~~~~~l~~~G~~~~ 169 (385)
T 4hwg_A 128 ----------------------RCFDQ-RVP---------EEINRKIID------HISDVNITLTEHARRYLIAEGLPAE 169 (385)
T ss_dssp ----------------------CCSCT-TST---------HHHHHHHHH------HHCSEEEESSHHHHHHHHHTTCCGG
T ss_pred ----------------------ccccc-cCc---------HHHHHHHHH------hhhceeecCCHHHHHHHHHcCCCcC
Confidence 00000 001 111111111 24677777766543322111 1 23
Q ss_pred CcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccCC-HHHHHHHHHHHHhC----CCCEEEEEcCCC
Q 012083 252 SIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLS-QQQFNELALGLELA----GQPFLCGVRPGF 326 (471)
Q Consensus 252 ~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~-~~~~~~~~~al~~~----~~~~i~~~~~~~ 326 (471)
++..+|-...+.-..........++.+.+.-.+ ++.|+++.|...... .+.+..+++++..+ +..+|+...+.
T Consensus 170 ~I~vtGnp~~D~~~~~~~~~~~~~~~~~lgl~~-~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p~- 247 (385)
T 4hwg_A 170 LTFKSGSHMPEVLDRFMPKILKSDILDKLSLTP-KQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHPR- 247 (385)
T ss_dssp GEEECCCSHHHHHHHHHHHHHHCCHHHHTTCCT-TSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECHH-
T ss_pred cEEEECCchHHHHHHhhhhcchhHHHHHcCCCc-CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECChH-
Confidence 678888432221000000001112223333222 458888888753332 24456666766543 56677655421
Q ss_pred CCCCCCCCCchhHHh-----hCCCcEEEeccch---hhhhccCcceeeeeccCcchhhHhhhcCCceeecccccchhhhH
Q 012083 327 INGSSTNNPDGLVAK-----VADFGKMVKWAPQ---EKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIK 398 (471)
Q Consensus 327 ~~~~~~~lp~~~~~~-----~~~nv~~~~~vpq---~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na 398 (471)
....+.+. ..+|+++.+.+++ ..+++++++ +||-.|.. +.||..+|+|+|+++-..+.+.
T Consensus 248 -------~~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adl--vvt~SGgv-~~EA~alG~Pvv~~~~~ter~e-- 315 (385)
T 4hwg_A 248 -------TKKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFC--ILSDSGTI-TEEASILNLPALNIREAHERPE-- 315 (385)
T ss_dssp -------HHHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCSE--EEECCTTH-HHHHHHTTCCEEECSSSCSCTH--
T ss_pred -------HHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcE--EEECCccH-HHHHHHcCCCEEEcCCCccchh--
Confidence 10111111 1357777665554 478877777 99998764 6999999999999987554222
Q ss_pred HHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHH
Q 012083 399 SCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVV 437 (471)
Q Consensus 399 ~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~ 437 (471)
..+ .|.++.+. .+.++|.+++.++|+|+..
T Consensus 316 --~v~-~G~~~lv~------~d~~~i~~ai~~ll~d~~~ 345 (385)
T 4hwg_A 316 --GMD-AGTLIMSG------FKAERVLQAVKTITEEHDN 345 (385)
T ss_dssp --HHH-HTCCEECC------SSHHHHHHHHHHHHTTCBT
T ss_pred --hhh-cCceEEcC------CCHHHHHHHHHHHHhChHH
Confidence 245 38776664 2789999999999998743
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* | Back alignment and structure |
|---|
Probab=99.27 E-value=1.8e-09 Score=109.09 Aligned_cols=354 Identities=12% Similarity=0.025 Sum_probs=178.6
Q ss_pred CcEEEEEcCC---------------CcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHh---hhcCCCCccCCCCCC
Q 012083 17 NVHVLLVSFP---------------AQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKES---RQLGSFSEMGDAQQL 78 (471)
Q Consensus 17 ~~~Il~~~~~---------------~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 78 (471)
+|||++++.. ..|.-..+..|++.|.++||+|++++........... .... ....+
T Consensus 7 ~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~------~~~~g 80 (499)
T 2r60_A 7 IKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIKDENWPEFSGEIDYY------QETNK 80 (499)
T ss_dssp CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECCCBTTBGGGCCSEEEC------TTCSS
T ss_pred cceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEEeCCCCcccccchhhhHHhc------cCCCC
Confidence 4899999852 3577788999999999999999999865332110000 0000 01247
Q ss_pred eEEEeCCCCCCCCCCcccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcc--hHHHHHHHcCCceEEEeC
Q 012083 79 VRIVPLPDGLEPEDDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFG--WALQVAAKLELKKASIYT 156 (471)
Q Consensus 79 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~--~~~~~A~~lgiP~v~~~~ 156 (471)
++++.++...........+...+..+. ..+..++++. . .+||+|.+..... .+..++..+|+|+|....
T Consensus 81 v~v~~~~~~~~~~~~~~~~~~~~~~~~----~~l~~~l~~~---~--~~~Divh~~~~~~~~~~~~~~~~~~~p~v~~~H 151 (499)
T 2r60_A 81 VRIVRIPFGGDKFLPKEELWPYLHEYV----NKIINFYREE---G--KFPQVVTTHYGDGGLAGVLLKNIKGLPFTFTGH 151 (499)
T ss_dssp EEEEEECCSCSSCCCGGGCGGGHHHHH----HHHHHHHHHH---T--CCCSEEEEEHHHHHHHHHHHHHHHCCCEEEECS
T ss_pred eEEEEecCCCcCCcCHHHHHHHHHHHH----HHHHHHHHhc---C--CCCCEEEEcCCcchHHHHHHHHhcCCcEEEEcc
Confidence 888777643211111111111111111 1122333321 1 4899999865322 344577888999987655
Q ss_pred chHHHHHHHhchhhhhhhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHH--HHhhhccCcEE
Q 012083 157 SAPGILAMIMNIPKFIEAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINV--IRQNIEASDRI 234 (471)
Q Consensus 157 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 234 (471)
.......... .. .+.. ...+ ...+...... ....+..++.+
T Consensus 152 ~~~~~~~~~~----------~~--------------~~~~---~~~~----------~~~~~~~~~~~~~~~~~~~ad~v 194 (499)
T 2r60_A 152 SLGAQKMEKL----------NV--------------NTSN---FKEM----------DERFKFHRRIIAERLTMSYADKI 194 (499)
T ss_dssp SCHHHHHHTT----------CC--------------CSTT---SHHH----------HHHHCHHHHHHHHHHHHHHCSEE
T ss_pred Ccccccchhh----------cc--------------CCCC---cchh----------hhhHHHHHHHHHHHHHHhcCCEE
Confidence 4332110000 00 0000 0000 0000000000 11234689999
Q ss_pred EEcchhhhchhhhh--h--------CCCcceeccccCCCCCCCCCCcCc-----chhccccc-----CCCCCcEEEEecC
Q 012083 235 LCTWFHELAPSANK--I--------LPSIIPVGPLIANGQPTGNFWSED-----LTCLSWLD-----KQPPGSVIYAAFG 294 (471)
Q Consensus 235 l~~s~~~l~~~~~~--~--------~~~~~~vGp~~~~~~~~~~~~~~~-----~~l~~~l~-----~~~~~~vv~vs~G 294 (471)
++.|....+.-... + ..++..|..-..... ..+.. ..+.+-+. ... +..+++..|
T Consensus 195 i~~S~~~~~~~~~~~~~g~~~~~~~~~ki~vi~ngvd~~~----~~~~~~~~~~~~~r~~~~~~~~~~~~-~~~~i~~vG 269 (499)
T 2r60_A 195 IVSTSQERFGQYSHDLYRGAVNVEDDDKFSVIPPGVNTRV----FDGEYGDKIKAKITKYLERDLGSERM-ELPAIIASS 269 (499)
T ss_dssp EESSHHHHHHTTTSGGGTTTCCTTCGGGEEECCCCBCTTT----SSSCCCHHHHHHHHHHHHHHSCGGGT-TSCEEEECS
T ss_pred EECCHHHHHHHHhhhcccccccccCCCCeEEECCCcChhh----cCccchhhhHHHHHHHhcccccccCC-CCcEEEEee
Confidence 99887765432111 1 123333332221111 11111 11212111 111 235667778
Q ss_pred ccccCCHHHHHHHHHHHHhCC-----CCEEEEEcCCCCCC-CCCCC-------CchhHH---h--hCCCcEEEeccchh-
Q 012083 295 SISKLSQQQFNELALGLELAG-----QPFLCGVRPGFING-SSTNN-------PDGLVA---K--VADFGKMVKWAPQE- 355 (471)
Q Consensus 295 S~~~~~~~~~~~~~~al~~~~-----~~~i~~~~~~~~~~-~~~~l-------p~~~~~---~--~~~nv~~~~~vpq~- 355 (471)
+... ...+..+++|+..+. ...++.+++..... ....+ .+.+.+ + ..++|.+.+++|+.
T Consensus 270 rl~~--~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~~V~~~G~v~~~~ 347 (499)
T 2r60_A 270 RLDQ--KKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSMFPLNSQQE 347 (499)
T ss_dssp CCCG--GGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTBCTTSCHHHHHHHHHHHHHHHHTTCBTTEEEEECCSHHH
T ss_pred cCcc--ccCHHHHHHHHHHHHHhCCCceEEEEECCCCCcccccccccccchHHHHHHHHHHHhcCCCceEEECCCCCHHH
Confidence 7532 223555666665542 12355555420000 00001 111211 1 25789999999865
Q ss_pred --hhhccC----cceeeeec----cCcchhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeecCCCCCCcCHhHHH
Q 012083 356 --KVLAHP----SVACYLTH----CGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIK 425 (471)
Q Consensus 356 --~lL~~~----~~~~~ItH----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~ 425 (471)
.+++.+ ++ +|.- |--+++.||+++|+|+|+... ......+.. -+.|..+++ -+.+++.
T Consensus 348 ~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~~----~g~~e~v~~-~~~g~l~~~-----~d~~~la 415 (499)
T 2r60_A 348 LAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTRN----GGPAEILDG-GKYGVLVDP-----EDPEDIA 415 (499)
T ss_dssp HHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEESS----BHHHHHTGG-GTSSEEECT-----TCHHHHH
T ss_pred HHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEecC----CCHHHHhcC-CceEEEeCC-----CCHHHHH
Confidence 577666 66 6632 334689999999999998853 334445555 257888853 4789999
Q ss_pred HHHHHHhCcHHHHHHH
Q 012083 426 RKVDELLSNDVVRKNA 441 (471)
Q Consensus 426 ~~i~~ll~~~~~~~~a 441 (471)
++|.++++|++.+++.
T Consensus 416 ~~i~~ll~~~~~~~~~ 431 (499)
T 2r60_A 416 RGLLKAFESEETWSAY 431 (499)
T ss_dssp HHHHHHHSCHHHHHHH
T ss_pred HHHHHHHhCHHHHHHH
Confidence 9999999998655443
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* | Back alignment and structure |
|---|
Probab=99.10 E-value=1e-08 Score=100.88 Aligned_cols=87 Identities=20% Similarity=0.024 Sum_probs=63.8
Q ss_pred CCCcEEEeccc---h---hhhhccCcceeeeecc----CcchhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeec
Q 012083 343 ADFGKMVKWAP---Q---EKVLAHPSVACYLTHC----GWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLE 412 (471)
Q Consensus 343 ~~nv~~~~~vp---q---~~lL~~~~~~~~ItHg----G~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~ 412 (471)
.++|.+.+|++ + ..+++.+++ +|.-. ..+++.||+++|+|+|+.+. ..+...+.. -+.|..+
T Consensus 292 ~~~V~~~G~~~~~~~~~~~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i~~-~~~g~l~- 363 (416)
T 2x6q_A 292 DYDVKVLTNLIGVHAREVNAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQIVD-GETGFLV- 363 (416)
T ss_dssp CTTEEEEEGGGTCCHHHHHHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHCCB-TTTEEEE-
T ss_pred CCcEEEecccCCCCHHHHHHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhheec-CCCeEEE-
Confidence 47899999886 2 257766776 66544 46689999999999999764 345555555 3677777
Q ss_pred CCCCCCcCHhHHHHHHHHHhCcHHHHHHHHH
Q 012083 413 PDDNGIIGRHEIKRKVDELLSNDVVRKNALK 443 (471)
Q Consensus 413 ~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~ 443 (471)
. +.+++.++|.++++|++.+++..+
T Consensus 364 ----~--d~~~la~~i~~ll~~~~~~~~~~~ 388 (416)
T 2x6q_A 364 ----R--DANEAVEVVLYLLKHPEVSKEMGA 388 (416)
T ss_dssp ----S--SHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred ----C--CHHHHHHHHHHHHhCHHHHHHHHH
Confidence 2 789999999999999865554433
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* | Back alignment and structure |
|---|
Probab=98.88 E-value=5.6e-07 Score=94.75 Aligned_cols=93 Identities=9% Similarity=0.060 Sum_probs=61.5
Q ss_pred CCCcEEEe----ccchhhhhc----cCcceeeeec----cCcchhhHhhhcCCceeecccccchhhhHHHHHhhhcceee
Q 012083 343 ADFGKMVK----WAPQEKVLA----HPSVACYLTH----CGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLW 410 (471)
Q Consensus 343 ~~nv~~~~----~vpq~~lL~----~~~~~~~ItH----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~ 410 (471)
.++|.+.+ ++|+.++.. .+++ ||.- |-..++.||+++|+|+|+. |-......+.. -+.|..
T Consensus 639 ~~~V~flG~~~~~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIas----d~GG~~EiV~d-g~~Gll 711 (816)
T 3s28_A 639 NGQFRWISSQMDRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVH-GKSGFH 711 (816)
T ss_dssp BBBEEEECCCCCHHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEE----SSBTHHHHCCB-TTTBEE
T ss_pred CCcEEEccCccccCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEe----CCCChHHHHcc-CCcEEE
Confidence 47888887 444454443 3344 6643 3456999999999999996 44445555555 367888
Q ss_pred ecCCCCCCcCHhHHHHHHHHHh----CcHHHHHHHHHHHHH
Q 012083 411 LEPDDNGIIGRHEIKRKVDELL----SNDVVRKNALKLKEL 447 (471)
Q Consensus 411 ~~~~~~~~~~~~~l~~~i~~ll----~~~~~~~~a~~l~~~ 447 (471)
+++ -+.++++++|.+++ .|++.+++..+-+.+
T Consensus 712 v~p-----~D~e~LA~aI~~lL~~Ll~d~~~~~~m~~~ar~ 747 (816)
T 3s28_A 712 IDP-----YHGDQAADTLADFFTKCKEDPSHWDEISKGGLQ 747 (816)
T ss_dssp ECT-----TSHHHHHHHHHHHHHHHHHCTHHHHHHHHHHHH
T ss_pred eCC-----CCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence 854 47789999997766 787655554444333
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=98.87 E-value=1.8e-06 Score=88.40 Aligned_cols=91 Identities=12% Similarity=0.034 Sum_probs=65.8
Q ss_pred CCcEEEeccchh---hhhccCcceeeee---ccCcchhhHhhhcCCceeecccc---cchhhhHHHHHhhhcceeeecCC
Q 012083 344 DFGKMVKWAPQE---KVLAHPSVACYLT---HCGWNSTMEGISMGVPFLCWPWG---HDHLYIKSCICDDWKIGLWLEPD 414 (471)
Q Consensus 344 ~nv~~~~~vpq~---~lL~~~~~~~~It---HgG~~s~~eal~~GvP~l~~P~~---~DQ~~na~~v~~~~G~G~~~~~~ 414 (471)
++|.+.+++|+. .+++.+++ ||. .|+.+++.||+++|+|+|++|-. .|. -+..+.. .|+...+.
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~--~~~~l~~-~g~~e~v~-- 506 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARV--AGSLNHH-LGLDEMNV-- 506 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSH--HHHHHHH-HTCGGGBC--
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHH--HHHHHHH-CCChhhhc--
Confidence 789999999854 56877776 652 26677999999999999997642 222 2344555 47777664
Q ss_pred CCCCcCHhHHHHHHHHHhCcHHHHHHHHHHH
Q 012083 415 DNGIIGRHEIKRKVDELLSNDVVRKNALKLK 445 (471)
Q Consensus 415 ~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~ 445 (471)
. +.+++.+++.++++|++.+++..+-+
T Consensus 507 --~--~~~~la~~i~~l~~~~~~~~~~~~~~ 533 (568)
T 2vsy_A 507 --A--DDAAFVAKAVALASDPAALTALHARV 533 (568)
T ss_dssp --S--SHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred --C--CHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 2 78999999999999987666544433
|
| >1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A | Back alignment and structure |
|---|
Probab=98.86 E-value=2.5e-07 Score=92.89 Aligned_cols=136 Identities=6% Similarity=-0.003 Sum_probs=80.5
Q ss_pred EEEEecCcccc-CCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCCc---hhHHhhCCCcE-EEeccchh---hhhc
Q 012083 288 VIYAAFGSISK-LSQQQFNELALGLELAGQPFLCGVRPGFINGSSTNNPD---GLVAKVADFGK-MVKWAPQE---KVLA 359 (471)
Q Consensus 288 vv~vs~GS~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~---~~~~~~~~nv~-~~~~vpq~---~lL~ 359 (471)
.+++..|++.. ...+.+...+..+.+.+.+++++-.+. ..+.+ .+.++.++++. +.++ +.. .+++
T Consensus 292 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~------~~~~~~l~~~~~~~~~~v~~~~g~-~~~~~~~~~~ 364 (485)
T 1rzu_A 292 PLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGD------VALEGALLAAASRHHGRVGVAIGY-NEPLSHLMQA 364 (485)
T ss_dssp CEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEEECBC------HHHHHHHHHHHHHTTTTEEEEESC-CHHHHHHHHH
T ss_pred eEEEEEccCccccCHHHHHHHHHHHHhcCceEEEEeCCc------hHHHHHHHHHHHhCCCcEEEecCC-CHHHHHHHHh
Confidence 47777888643 223333333333333355655544321 00111 12223357887 5688 543 5787
Q ss_pred cCcceeeeec----cCcchhhHhhhcCCceeecccccchhhhHHHHHhhh---------cceeeecCCCCCCcCHhHHHH
Q 012083 360 HPSVACYLTH----CGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDW---------KIGLWLEPDDNGIIGRHEIKR 426 (471)
Q Consensus 360 ~~~~~~~ItH----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~---------G~G~~~~~~~~~~~~~~~l~~ 426 (471)
.+++ +|.- |.-+++.||+++|+|+|+... ......+.+ - +.|..++. -+.+++.+
T Consensus 365 ~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v~~-~~~~~~~~~~~~G~l~~~-----~d~~~la~ 432 (485)
T 1rzu_A 365 GCDA--IIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTVID-ANHAALASKAATGVQFSP-----VTLDGLKQ 432 (485)
T ss_dssp HCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCB-CCHHHHHTTCCCBEEESS-----CSHHHHHH
T ss_pred cCCE--EEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhheecc-cccccccccCCcceEeCC-----CCHHHHHH
Confidence 7776 6632 445689999999999999754 233444443 2 47777753 46799999
Q ss_pred HHHHHh---CcHHHHHHHH
Q 012083 427 KVDELL---SNDVVRKNAL 442 (471)
Q Consensus 427 ~i~~ll---~~~~~~~~a~ 442 (471)
+|.+++ +|++.+++..
T Consensus 433 ~i~~ll~~~~~~~~~~~~~ 451 (485)
T 1rzu_A 433 AIRRTVRYYHDPKLWTQMQ 451 (485)
T ss_dssp HHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHhCCHHHHHHHH
Confidence 999999 7876555443
|
| >2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A | Back alignment and structure |
|---|
Probab=98.82 E-value=1.6e-06 Score=86.98 Aligned_cols=137 Identities=12% Similarity=0.075 Sum_probs=79.5
Q ss_pred EEEEecCcccc-CCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCCch---hHHhhCCCcE-EEeccchh--hhhcc
Q 012083 288 VIYAAFGSISK-LSQQQFNELALGLELAGQPFLCGVRPGFINGSSTNNPDG---LVAKVADFGK-MVKWAPQE--KVLAH 360 (471)
Q Consensus 288 vv~vs~GS~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~---~~~~~~~nv~-~~~~vpq~--~lL~~ 360 (471)
.+++..|++.. ...+.+...+..+.+.+.+++++-.+. ....+. +.++.++++. +.++.... .+++.
T Consensus 293 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~------~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~ 366 (485)
T 2qzs_A 293 PLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGD------PVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGG 366 (485)
T ss_dssp CEEEEEEEESGGGCHHHHHHHHHHHHHTTCEEEEEEEEC------HHHHHHHHHHHHHSTTTEEEEESCCHHHHHHHHHH
T ss_pred eEEEEeccCccccCHHHHHHHHHHHhhCCcEEEEEeCCc------hHHHHHHHHHHHhCCCcEEEeCCCCHHHHHHHHHh
Confidence 56666777532 233333333333333355655544321 001111 2223356886 66883332 57877
Q ss_pred Ccceeeeec----cCcchhhHhhhcCCceeecccccchhhhHHHHHhhh---------cceeeecCCCCCCcCHhHHHHH
Q 012083 361 PSVACYLTH----CGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDW---------KIGLWLEPDDNGIIGRHEIKRK 427 (471)
Q Consensus 361 ~~~~~~ItH----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~---------G~G~~~~~~~~~~~~~~~l~~~ 427 (471)
+++ +|.- |.-+++.||+++|+|+|+... ......+.. - +.|..++. -+.++++++
T Consensus 367 adv--~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v~~-~~~~~~~~~~~~G~l~~~-----~d~~~la~~ 434 (485)
T 2qzs_A 367 ADV--ILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTVSD-CSLENLADGVASGFVFED-----SNAWSLLRA 434 (485)
T ss_dssp CSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCB-CCHHHHHTTCCCBEEECS-----SSHHHHHHH
T ss_pred CCE--EEECCccCCCcHHHHHHHHCCCCEEECCC----CCccceecc-CccccccccccceEEECC-----CCHHHHHHH
Confidence 777 6632 445688999999999999854 233444443 2 47787753 478999999
Q ss_pred HHHHh---CcHHHHHHHH
Q 012083 428 VDELL---SNDVVRKNAL 442 (471)
Q Consensus 428 i~~ll---~~~~~~~~a~ 442 (471)
|.+++ +|++.+++..
T Consensus 435 i~~ll~~~~~~~~~~~~~ 452 (485)
T 2qzs_A 435 IRRAFVLWSRPSLWRFVQ 452 (485)
T ss_dssp HHHHHHHHTSHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHH
Confidence 99999 7876555443
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* | Back alignment and structure |
|---|
Probab=98.67 E-value=3.2e-06 Score=82.81 Aligned_cols=88 Identities=14% Similarity=0.064 Sum_probs=58.9
Q ss_pred cEEEeccchh---hhhccCcceeeee----ccCcchhhHhhhcCCceeecccccchhhhHHHHHhhhcc-----------
Q 012083 346 GKMVKWAPQE---KVLAHPSVACYLT----HCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKI----------- 407 (471)
Q Consensus 346 v~~~~~vpq~---~lL~~~~~~~~It----HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~----------- 407 (471)
+.+.+|+|+. .+++.+++ +|. -|..+++.||+++|+|+|+.... .....+.+ |.
T Consensus 256 v~~~g~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~~----g~~e~v~~--~~~~~i~~~~~~~ 327 (413)
T 3oy2_A 256 MINRTVLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISAVG----GADDYFSG--DCVYKIKPSAWIS 327 (413)
T ss_dssp EEECSCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEECCH----HHHHHSCT--TTSEEECCCEEEE
T ss_pred eeccCcCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcCCC----ChHHHHcc--Ccccccccccccc
Confidence 5566999954 57877777 663 23355899999999999997542 33333333 22
Q ss_pred -----ee--eecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHH
Q 012083 408 -----GL--WLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKEL 447 (471)
Q Consensus 408 -----G~--~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~ 447 (471)
|. .+.. -+.+++.++| ++++|++.+++..+-+.+
T Consensus 328 ~~~~~G~~gl~~~-----~d~~~la~~i-~l~~~~~~~~~~~~~a~~ 368 (413)
T 3oy2_A 328 VDDRDGIGGIEGI-----IDVDDLVEAF-TFFKDEKNRKEYGKRVQD 368 (413)
T ss_dssp CTTTCSSCCEEEE-----CCHHHHHHHH-HHTTSHHHHHHHHHHHHH
T ss_pred cccccCcceeeCC-----CCHHHHHHHH-HHhcCHHHHHHHHHHHHH
Confidence 44 5532 3889999999 999998766554444443
|
| >2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A* | Back alignment and structure |
|---|
Probab=98.62 E-value=4.3e-06 Score=80.77 Aligned_cols=92 Identities=18% Similarity=0.203 Sum_probs=61.9
Q ss_pred CcEEEeccchh-hhhccCcceeeeec-----cCcchhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeecCCCCCC
Q 012083 345 FGKMVKWAPQE-KVLAHPSVACYLTH-----CGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGI 418 (471)
Q Consensus 345 nv~~~~~vpq~-~lL~~~~~~~~ItH-----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~ 418 (471)
++.+.++.... .+++.+++ ++.- +|..++.||+++|+|+|+-|...+.......+.+ -|.++...
T Consensus 261 ~v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~-~G~l~~~~------ 331 (374)
T 2xci_A 261 DVILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEK-EGAGFEVK------ 331 (374)
T ss_dssp SEEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHH-TTCEEECC------
T ss_pred cEEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHH-CCCEEEeC------
Confidence 45555655443 57765665 5431 2457899999999999987766666665555555 37766652
Q ss_pred cCHhHHHHHHHHHhCcHH----HHHHHHHHHHH
Q 012083 419 IGRHEIKRKVDELLSNDV----VRKNALKLKEL 447 (471)
Q Consensus 419 ~~~~~l~~~i~~ll~~~~----~~~~a~~l~~~ 447 (471)
+.++|.++|.++++| + +.+++++..+.
T Consensus 332 -d~~~La~ai~~ll~d-~~r~~mg~~ar~~~~~ 362 (374)
T 2xci_A 332 -NETELVTKLTELLSV-KKEIKVEEKSREIKGC 362 (374)
T ss_dssp -SHHHHHHHHHHHHHS-CCCCCHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHh
Confidence 678999999999988 5 44444444433
|
| >2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* | Back alignment and structure |
|---|
Probab=98.54 E-value=1.3e-05 Score=78.38 Aligned_cols=76 Identities=9% Similarity=0.031 Sum_probs=57.7
Q ss_pred CCCcEEEeccchh---hhhccCcceeeee---c-cCcchhhHhh-------hcCCceeecccccchhhhHHHHHhhhcce
Q 012083 343 ADFGKMVKWAPQE---KVLAHPSVACYLT---H-CGWNSTMEGI-------SMGVPFLCWPWGHDHLYIKSCICDDWKIG 408 (471)
Q Consensus 343 ~~nv~~~~~vpq~---~lL~~~~~~~~It---H-gG~~s~~eal-------~~GvP~l~~P~~~DQ~~na~~v~~~~G~G 408 (471)
.+||.+.+++|+. .+++.+++ +|. + |-.+++.||+ ++|+|+|+... +... ..|
T Consensus 264 ~~~V~f~G~~~~~~l~~~~~~adv--~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~~-~~G 330 (406)
T 2hy7_A 264 GDNVIVYGEMKHAQTIGYIKHARF--GIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVGP-YKS 330 (406)
T ss_dssp CTTEEEECCCCHHHHHHHHHTCSE--EECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTCS-CSS
T ss_pred CCCEEEcCCCCHHHHHHHHHhcCE--EEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------cccC-cce
Confidence 5789999999965 57877777 553 2 3345788999 99999999854 4552 567
Q ss_pred ee-ecCCCCCCcCHhHHHHHHHHHhCcHH
Q 012083 409 LW-LEPDDNGIIGRHEIKRKVDELLSNDV 436 (471)
Q Consensus 409 ~~-~~~~~~~~~~~~~l~~~i~~ll~~~~ 436 (471)
.. +.+ -+.+++.++|.++++|++
T Consensus 331 ~l~v~~-----~d~~~la~ai~~ll~~~~ 354 (406)
T 2hy7_A 331 RFGYTP-----GNADSVIAAITQALEAPR 354 (406)
T ss_dssp EEEECT-----TCHHHHHHHHHHHHHCCC
T ss_pred EEEeCC-----CCHHHHHHHHHHHHhCcc
Confidence 77 643 378999999999998875
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=98.39 E-value=7.2e-07 Score=76.43 Aligned_cols=140 Identities=10% Similarity=0.040 Sum_probs=90.3
Q ss_pred EEEEecCccccCCHHHHHHHHHHHHhC-CCCEEEEEcCCCCCCCCCCCCchh---HHhhCCCcEEEeccch---hhhhcc
Q 012083 288 VIYAAFGSISKLSQQQFNELALGLELA-GQPFLCGVRPGFINGSSTNNPDGL---VAKVADFGKMVKWAPQ---EKVLAH 360 (471)
Q Consensus 288 vv~vs~GS~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~lp~~~---~~~~~~nv~~~~~vpq---~~lL~~ 360 (471)
.+++..|+... ...+..+++++... +.++++.-.+. ....+.... ....++|+.+.+|+|+ ..+++.
T Consensus 24 ~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~l~i~G~~~----~~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~ 97 (177)
T 2f9f_A 24 DFWLSVNRIYP--EKRIELQLEVFKKLQDEKLYIVGWFS----KGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSR 97 (177)
T ss_dssp SCEEEECCSSG--GGTHHHHHHHHHHCTTSCEEEEBCCC----TTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHH
T ss_pred CEEEEEecccc--ccCHHHHHHHHHhCCCcEEEEEecCc----cHHHHHHHHHhhhcccCCcEEEeCCCCHHHHHHHHHh
Confidence 44556676532 33456677777766 45665544322 111121111 1124579999999997 478877
Q ss_pred Ccceeeee---ccC-cchhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHH
Q 012083 361 PSVACYLT---HCG-WNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDV 436 (471)
Q Consensus 361 ~~~~~~It---HgG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~ 436 (471)
+++ +|. +.| .+++.||+++|+|+|+... ..+...+.+ .+.|..+ . -+.+++.++|.++++|++
T Consensus 98 adi--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~-~~~g~~~-~-----~d~~~l~~~i~~l~~~~~ 164 (177)
T 2f9f_A 98 CKG--LLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETVIN-EKTGYLV-N-----ADVNEIIDAMKKVSKNPD 164 (177)
T ss_dssp CSE--EEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHCCB-TTTEEEE-C-----SCHHHHHHHHHHHHHCTT
T ss_pred CCE--EEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHhcC-CCccEEe-C-----CCHHHHHHHHHHHHhCHH
Confidence 777 665 334 4499999999999998753 445555555 3677777 3 277999999999998886
Q ss_pred H-HHHHHHHHH
Q 012083 437 V-RKNALKLKE 446 (471)
Q Consensus 437 ~-~~~a~~l~~ 446 (471)
. ++++++.++
T Consensus 165 ~~~~~~~~~a~ 175 (177)
T 2f9f_A 165 KFKKDCFRRAK 175 (177)
T ss_dssp TTHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 4 666655543
|
| >3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A | Back alignment and structure |
|---|
Probab=98.08 E-value=0.0045 Score=62.46 Aligned_cols=142 Identities=12% Similarity=0.084 Sum_probs=95.2
Q ss_pred CcEEEEecCccccCCHHHHHHHHHHHHhCCCCEEEE--EcCCCCCCCCCCCCchhHH-----hhCCCcEEEeccchhh--
Q 012083 286 GSVIYAAFGSISKLSQQQFNELALGLELAGQPFLCG--VRPGFINGSSTNNPDGLVA-----KVADFGKMVKWAPQEK-- 356 (471)
Q Consensus 286 ~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~--~~~~~~~~~~~~lp~~~~~-----~~~~nv~~~~~vpq~~-- 356 (471)
+.++|.+|++.....++.+....+.+.+.+..++|. ++.. ........+ .+.+++.+.+.+|+.+
T Consensus 440 G~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~------~g~~~~~~~~~~~~GI~~Rv~F~g~~p~~e~l 513 (631)
T 3q3e_A 440 EVVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQS------NGITHPYVERFIKSYLGDSATAHPHSPYHQYL 513 (631)
T ss_dssp SEEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSC------CGGGHHHHHHHHHHHHGGGEEEECCCCHHHHH
T ss_pred CeEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCC------chhhHHHHHHHHHcCCCccEEEcCCCCHHHHH
Confidence 359999999998889999999999998888777764 3321 111111111 1356788889998654
Q ss_pred -hhccCcceeeee---ccCcchhhHhhhcCCceeeccccc-chhhhHHHHHhhhcceee-ecCCCCCCcCHhHHHHHHHH
Q 012083 357 -VLAHPSVACYLT---HCGWNSTMEGISMGVPFLCWPWGH-DHLYIKSCICDDWKIGLW-LEPDDNGIIGRHEIKRKVDE 430 (471)
Q Consensus 357 -lL~~~~~~~~It---HgG~~s~~eal~~GvP~l~~P~~~-DQ~~na~~v~~~~G~G~~-~~~~~~~~~~~~~l~~~i~~ 430 (471)
.+...++ |+. .+|.+|++|||++|||+|+++-.. --..-+..+.. .|+... +.. +.++..+...+
T Consensus 514 a~y~~aDI--fLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~-~GLpE~LIA~------d~eeYv~~Av~ 584 (631)
T 3q3e_A 514 RILHNCDM--MVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKR-LGLPEWLIAN------TVDEYVERAVR 584 (631)
T ss_dssp HHHHTCSE--EECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHH-TTCCGGGEES------SHHHHHHHHHH
T ss_pred HHHhcCcE--EEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHh-cCCCcceecC------CHHHHHHHHHH
Confidence 4455555 543 378899999999999999987421 11222233444 476653 432 67888888889
Q ss_pred HhCcHHHHHHHH
Q 012083 431 LLSNDVVRKNAL 442 (471)
Q Consensus 431 ll~~~~~~~~a~ 442 (471)
+.+|++.+++.+
T Consensus 585 La~D~~~l~~LR 596 (631)
T 3q3e_A 585 LAENHQERLELR 596 (631)
T ss_dssp HHHCHHHHHHHH
T ss_pred HhCCHHHHHHHH
Confidence 999987655543
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* | Back alignment and structure |
|---|
Probab=98.06 E-value=2.2e-05 Score=76.88 Aligned_cols=85 Identities=14% Similarity=-0.027 Sum_probs=57.4
Q ss_pred CCCcEEEeccchh---hhhccCcceeeeecc---C-cchhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeecCCC
Q 012083 343 ADFGKMVKWAPQE---KVLAHPSVACYLTHC---G-WNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDD 415 (471)
Q Consensus 343 ~~nv~~~~~vpq~---~lL~~~~~~~~ItHg---G-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~ 415 (471)
.+++.+.+++|+. .+++.+++ ||.-. | .+++.||+++|+|+|+- ..+ ....+... ..|..+++
T Consensus 294 ~~~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~~-~~g----~~e~v~~~-~~G~lv~~-- 363 (413)
T 2x0d_A 294 GIHLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVITN-KYE----NKDLSNWH-SNIVSLEQ-- 363 (413)
T ss_dssp TEEEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEEE-CBT----TBCGGGTB-TTEEEESS--
T ss_pred cCcEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEEe-CCC----cchhhhcC-CCEEEeCC--
Confidence 4678889999865 57877777 66422 3 35679999999999982 221 12233441 46777753
Q ss_pred CCCcCHhHHHHHHHHHhCcHHHHHH
Q 012083 416 NGIIGRHEIKRKVDELLSNDVVRKN 440 (471)
Q Consensus 416 ~~~~~~~~l~~~i~~ll~~~~~~~~ 440 (471)
-+.++++++|.++++|++.+++
T Consensus 364 ---~d~~~la~ai~~ll~~~~~~~~ 385 (413)
T 2x0d_A 364 ---LNPENIAETLVELCMSFNNRDV 385 (413)
T ss_dssp ---CSHHHHHHHHHHHHHHTC----
T ss_pred ---CCHHHHHHHHHHHHcCHHHHHH
Confidence 4789999999999999876665
|
| >1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7 | Back alignment and structure |
|---|
Probab=97.88 E-value=0.0012 Score=62.80 Aligned_cols=103 Identities=11% Similarity=0.084 Sum_probs=69.6
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhC--CCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCe-EEEeCCCCCCCCCCc
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADC--RIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLV-RIVPLPDGLEPEDDR 94 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~r--Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~ 94 (471)
|||+++.....|++.-..++.++|+++ +.+|++++.+.+.+.++.. +.+ +++.++.. ...
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~~~-------------p~i~~v~~~~~~----~~~ 63 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSRM-------------PEVNEAIPMPLG----HGA 63 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTTC-------------TTEEEEEEC----------
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcC-------------CccCEEEEecCC----ccc
Confidence 599999999999999999999999987 9999999998877765433 245 34444210 000
Q ss_pred ccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEE
Q 012083 95 KDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKAS 153 (471)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~ 153 (471)
. ....+.++.+.++. .+||++|.-....-...++...|+|...
T Consensus 64 ~------------~~~~~~~l~~~l~~----~~~D~vid~~~~~~sa~~~~~~~~~~~i 106 (348)
T 1psw_A 64 L------------EIGERRKLGHSLRE----KRYDRAYVLPNSFKSALVPLFAGIPHRT 106 (348)
T ss_dssp -------------CHHHHHHHHHHTTT----TTCSEEEECSCCSGGGHHHHHTTCSEEE
T ss_pred c------------chHHHHHHHHHHHh----cCCCEEEECCCChHHHHHHHHhCCCEEe
Confidence 0 11223455566665 7999999332334556678888999744
|
| >3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula} | Back alignment and structure |
|---|
Probab=97.84 E-value=0.00052 Score=65.34 Aligned_cols=109 Identities=13% Similarity=0.118 Sum_probs=76.2
Q ss_pred ccCCCCcEEEEEcCCCcccHHHHHHHHHHHHhC--CCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeE-EEeCCCCC
Q 012083 12 SLNKTNVHVLLVSFPAQGHVASLMKLAHRLADC--RIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVR-IVPLPDGL 88 (471)
Q Consensus 12 ~m~~~~~~Il~~~~~~~GH~~p~~~La~~L~~r--Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~ 88 (471)
.|+...+||+++-..+.|++.-..++.++|+++ +.+|++++.+.+.+.++.. +.+. ++.++..
T Consensus 3 ~~~l~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~~-------------p~vd~vi~~~~~- 68 (349)
T 3tov_A 3 AMELDYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEYN-------------PNIDELIVVDKK- 68 (349)
T ss_dssp SCCCTTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSSC-------------TTCSEEEEECCS-
T ss_pred CcCCCCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcC-------------CCccEEEEeCcc-
Confidence 344566899999999999999999999999987 9999999999988877643 2443 4444321
Q ss_pred CCCCCcccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCe-eEEEECCCcchHHHHHHHcCCceEE
Q 012083 89 EPEDDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKI-TCVIADVTFGWALQVAAKLELKKAS 153 (471)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~p-D~vV~D~~~~~~~~~A~~lgiP~v~ 153 (471)
.....+. .+.+++..++. .++ |++|.-....-...++...|+|..+
T Consensus 69 -------~~~~~~~--------~~~~l~~~Lr~----~~y~D~vidl~~~~rs~~l~~~~~a~~ri 115 (349)
T 3tov_A 69 -------GRHNSIS--------GLNEVAREINA----KGKTDIVINLHPNERTSYLAWKIHAPITT 115 (349)
T ss_dssp -------SHHHHHH--------HHHHHHHHHHH----HCCCCEEEECCCSHHHHHHHHHHCCSEEE
T ss_pred -------cccccHH--------HHHHHHHHHhh----CCCCeEEEECCCChHHHHHHHHhCCCeEE
Confidence 1111111 12234455554 789 9999655555566788889999765
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=97.78 E-value=0.00035 Score=73.23 Aligned_cols=147 Identities=15% Similarity=0.088 Sum_probs=96.4
Q ss_pred CCcEEEEecCccccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCCchhHHh--hCCCcEEEeccchhhhh-ccC
Q 012083 285 PGSVIYAAFGSISKLSQQQFNELALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAK--VADFGKMVKWAPQEKVL-AHP 361 (471)
Q Consensus 285 ~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~--~~~nv~~~~~vpq~~lL-~~~ 361 (471)
+..+||.||.+....+++.+..-.+.|++.+...+|....... ....+-..+.+. .++++.+.+.+|..+-| .+.
T Consensus 521 ~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~--~~~~l~~~~~~~gi~~~r~~f~~~~~~~~~l~~~~ 598 (723)
T 4gyw_A 521 EDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAV--GEPNIQQYAQNMGLPQNRIIFSPVAPKEEHVRRGQ 598 (723)
T ss_dssp TTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGG--GHHHHHHHHHHTTCCGGGEEEEECCCHHHHHHHGG
T ss_pred CCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHH--HHHHHHHHHHhcCCCcCeEEECCCCCHHHHHHHhC
Confidence 3469999999999999999999999999999999998865410 000111111110 14667788888865433 223
Q ss_pred cceeeee---ccCcchhhHhhhcCCceeecccc-cchhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHH
Q 012083 362 SVACYLT---HCGWNSTMEGISMGVPFLCWPWG-HDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVV 437 (471)
Q Consensus 362 ~~~~~It---HgG~~s~~eal~~GvP~l~~P~~-~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~ 437 (471)
.+++++- .+|.+|++|||++|||+|.++-. .=-..-+..+.. .|+...+-. +.++-.+..-++-+|++.
T Consensus 599 ~~Di~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~-~gl~e~ia~------~~~~Y~~~a~~la~d~~~ 671 (723)
T 4gyw_A 599 LADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTC-LGCLELIAK------NRQEYEDIAVKLGTDLEY 671 (723)
T ss_dssp GCSEEECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHH-HTCGGGBCS------SHHHHHHHHHHHHHCHHH
T ss_pred CCeEEeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHH-cCCcccccC------CHHHHHHHHHHHhcCHHH
Confidence 3444764 89999999999999999999832 222333445555 577766642 555555555566677654
Q ss_pred HHH
Q 012083 438 RKN 440 (471)
Q Consensus 438 ~~~ 440 (471)
+++
T Consensus 672 l~~ 674 (723)
T 4gyw_A 672 LKK 674 (723)
T ss_dssp HHH
T ss_pred HHH
Confidence 433
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=97.63 E-value=0.00022 Score=59.72 Aligned_cols=137 Identities=17% Similarity=0.183 Sum_probs=79.5
Q ss_pred cEEEEecCccccCCHHHHHHHHHHHHhCCC--CE-EEEEcCCCCCCCCCCCCch---hHHhhCCCcEEEeccchh---hh
Q 012083 287 SVIYAAFGSISKLSQQQFNELALGLELAGQ--PF-LCGVRPGFINGSSTNNPDG---LVAKVADFGKMVKWAPQE---KV 357 (471)
Q Consensus 287 ~vv~vs~GS~~~~~~~~~~~~~~al~~~~~--~~-i~~~~~~~~~~~~~~lp~~---~~~~~~~nv~~~~~vpq~---~l 357 (471)
+++++..|+... ...+..+++++..+.. .+ ++.++.. ...+. ..++.+.++.+ +|+|+. .+
T Consensus 2 ~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~l~i~G~g-------~~~~~~~~~~~~~~~~v~~-g~~~~~~~~~~ 71 (166)
T 3qhp_A 2 PFKIAMVGRYSN--EKNQSVLIKAVALSKYKQDIVLLLKGKG-------PDEKKIKLLAQKLGVKAEF-GFVNSNELLEI 71 (166)
T ss_dssp CEEEEEESCCST--TTTHHHHHHHHHTCTTGGGEEEEEECCS-------TTHHHHHHHHHHHTCEEEC-CCCCHHHHHHH
T ss_pred ceEEEEEeccch--hcCHHHHHHHHHHhccCCCeEEEEEeCC-------ccHHHHHHHHHHcCCeEEE-eecCHHHHHHH
Confidence 477778887633 2335566667765531 22 2333322 11122 22233457778 999864 57
Q ss_pred hccCcceeeee----ccCcchhhHhhhcCC-ceeecccccchhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHh
Q 012083 358 LAHPSVACYLT----HCGWNSTMEGISMGV-PFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELL 432 (471)
Q Consensus 358 L~~~~~~~~It----HgG~~s~~eal~~Gv-P~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll 432 (471)
++.+++ +|. -|..+++.||+++|+ |+|+.... ......+.. -+. .+. .-+.+++.++|.+++
T Consensus 72 ~~~adv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~---~~~~~~~~~-~~~--~~~-----~~~~~~l~~~i~~l~ 138 (166)
T 3qhp_A 72 LKTCTL--YVHAANVESEAIACLEAISVGIVPVIANSPL---SATRQFALD-ERS--LFE-----PNNAKDLSAKIDWWL 138 (166)
T ss_dssp HTTCSE--EEECCCSCCCCHHHHHHHHTTCCEEEECCTT---CGGGGGCSS-GGG--EEC-----TTCHHHHHHHHHHHH
T ss_pred HHhCCE--EEECCcccCccHHHHHHHhcCCCcEEeeCCC---CchhhhccC-Cce--EEc-----CCCHHHHHHHHHHHH
Confidence 877776 664 244569999999996 99994321 111112222 132 332 237899999999999
Q ss_pred CcHHHHHHHHHHHH
Q 012083 433 SNDVVRKNALKLKE 446 (471)
Q Consensus 433 ~~~~~~~~a~~l~~ 446 (471)
+|++.+++..+-+.
T Consensus 139 ~~~~~~~~~~~~~~ 152 (166)
T 3qhp_A 139 ENKLERERMQNEYA 152 (166)
T ss_dssp HCHHHHHHHHHHHH
T ss_pred hCHHHHHHHHHHHH
Confidence 99865554444333
|
| >3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* | Back alignment and structure |
|---|
Probab=97.60 E-value=0.042 Score=55.37 Aligned_cols=134 Identities=11% Similarity=0.086 Sum_probs=70.9
Q ss_pred EEEEecCccccCCHHHHHHHHHHHH---hCCCCEEEEEcCCCCCCCCCCCCchhHHhhCCCcEEEeccchh---hhhccC
Q 012083 288 VIYAAFGSISKLSQQQFNELALGLE---LAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQE---KVLAHP 361 (471)
Q Consensus 288 vv~vs~GS~~~~~~~~~~~~~~al~---~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~---~lL~~~ 361 (471)
++++..|.+.. ...+..+++|+. +.+.++++...+. +.....-.......+.++.+....+.. .+++.+
T Consensus 328 p~i~~vgRl~~--~Kg~~~li~a~~~l~~~~~~l~l~G~G~---~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~a 402 (536)
T 3vue_A 328 PLIAFIGRLEE--QKGPDVMAAAIPELMQEDVQIVLLGTGK---KKFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMAGA 402 (536)
T ss_dssp CEEEEECCBSG--GGCHHHHHHHHHHHTTSSCEEEEECCBC---HHHHHHHHHHHHHSTTTEEEECSCCHHHHHHHHHHC
T ss_pred cEEEEEeeccc--cCChHHHHHHHHHhHhhCCeEEEEeccC---chHHHHHHHHHhhcCCceEEEEeccHHHHHHHHHhh
Confidence 55666777532 222444444443 3455555444322 000000011223347888888777754 467666
Q ss_pred cceeeeecc---C-cchhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeecCCC-----CCCcCHhHHHHHHHHHh
Q 012083 362 SVACYLTHC---G-WNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDD-----NGIIGRHEIKRKVDELL 432 (471)
Q Consensus 362 ~~~~~ItHg---G-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~-----~~~~~~~~l~~~i~~ll 432 (471)
++ ||.-. | -.+++||+++|+|+|+.... -....+.+. .-|....... -...+.++|.++|+++|
T Consensus 403 D~--~v~PS~~E~fgl~~lEAma~G~PvI~s~~g----G~~e~V~dg-~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral 475 (536)
T 3vue_A 403 DV--LAVPSRFEPCGLIQLQGMRYGTPCACASTG----GLVDTVIEG-KTGFHMGRLSVDCKVVEPSDVKKVAATLKRAI 475 (536)
T ss_dssp SE--EEECCSCCSSCSHHHHHHHTTCCEEECSCT----HHHHHCCBT-TTEEECCCCCSCTTCCCHHHHHHHHHHHHHHH
T ss_pred he--eecccccCCCCHHHHHHHHcCCCEEEcCCC----CchheeeCC-CCccccccCCCceeEECCCCHHHHHHHHHHHH
Confidence 66 66532 3 35889999999999987542 233333331 2333222100 02235688999998877
Q ss_pred C
Q 012083 433 S 433 (471)
Q Consensus 433 ~ 433 (471)
.
T Consensus 476 ~ 476 (536)
T 3vue_A 476 K 476 (536)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=97.44 E-value=0.0015 Score=56.32 Aligned_cols=86 Identities=9% Similarity=0.017 Sum_probs=62.9
Q ss_pred CcEE-Eeccchh---hhhccCcceeeeec----cCcchhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeecCCCC
Q 012083 345 FGKM-VKWAPQE---KVLAHPSVACYLTH----CGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDN 416 (471)
Q Consensus 345 nv~~-~~~vpq~---~lL~~~~~~~~ItH----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~ 416 (471)
++.+ .+++++. .+++.+++ +|.. |..+++.||+++|+|+|+... ..+...+ . -+.|..++.
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~~-~-~~~g~~~~~--- 164 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDII-T-NETGILVKA--- 164 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESC----HHHHHHC-C-TTTCEEECT---
T ss_pred CEEEEeccCCHHHHHHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeCC----CChHHHc-C-CCceEEecC---
Confidence 8999 8999953 67877777 6643 235688999999999998754 3344455 5 367888853
Q ss_pred CCcCHhHHHHHHHHHhC-cHHHHHHHHH
Q 012083 417 GIIGRHEIKRKVDELLS-NDVVRKNALK 443 (471)
Q Consensus 417 ~~~~~~~l~~~i~~ll~-~~~~~~~a~~ 443 (471)
-+.+++.++|.++++ |++.+++..+
T Consensus 165 --~~~~~l~~~i~~l~~~~~~~~~~~~~ 190 (200)
T 2bfw_A 165 --GDPGELANAILKALELSRSDLSKFRE 190 (200)
T ss_dssp --TCHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred --CCHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 378999999999999 9865544433
|
| >3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* | Back alignment and structure |
|---|
Probab=97.13 E-value=0.00099 Score=62.97 Aligned_cols=108 Identities=13% Similarity=0.111 Sum_probs=77.8
Q ss_pred CcEEEeccchhhh---hccCcceeeeeccCc---------chhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeec
Q 012083 345 FGKMVKWAPQEKV---LAHPSVACYLTHCGW---------NSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLE 412 (471)
Q Consensus 345 nv~~~~~vpq~~l---L~~~~~~~~ItHgG~---------~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~ 412 (471)
||.+.+|+|+.++ |+..+.+++.+-+.. +-+.|+|++|+|+|+.+ ...++..+.+ .|+|..++
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v~~-~~~G~~~~ 289 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELIEN-NGLGWIVK 289 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHHHH-HTCEEEES
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHHHh-CCeEEEeC
Confidence 8999999998754 544555545433322 35789999999999754 5678888889 59999994
Q ss_pred CCCCCCcCHhHHHHHHHHHhCcH--HHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHH
Q 012083 413 PDDNGIIGRHEIKRKVDELLSND--VVRKNALKLKELAQKSVTKEGSSSKNLEYFIKQ 468 (471)
Q Consensus 413 ~~~~~~~~~~~l~~~i~~ll~~~--~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~ 468 (471)
+.+++.+++..+..++ ++++|+++.++++++ |-...+.+.+.+.+
T Consensus 290 -------~~~e~~~~i~~l~~~~~~~m~~na~~~a~~~~~----~~f~k~~l~~~~~~ 336 (339)
T 3rhz_A 290 -------DVEEAIMKVKNVNEDEYIELVKNVRSFNPILRK----GFFTRRLLTESVFQ 336 (339)
T ss_dssp -------SHHHHHHHHHHCCHHHHHHHHHHHHHHTHHHHT----THHHHHHHHHHHHH
T ss_pred -------CHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhc----cHHHHHHHHHHHHH
Confidence 4688999998876443 678888888888765 55555555555444
|
| >2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A* | Back alignment and structure |
|---|
Probab=96.84 E-value=0.014 Score=54.70 Aligned_cols=46 Identities=20% Similarity=0.194 Sum_probs=41.6
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhC--CCeEEEEeCCcchhhhHHh
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADC--RIKVTFVTTEFICERIKES 63 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~r--Gh~Vt~~~~~~~~~~~~~~ 63 (471)
|||+++-..+.|++.-..++.++|+++ +.+|++++.+.+.+.+...
T Consensus 1 ~~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~~~~ 48 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIPSWH 48 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGGGTHHHHTS
T ss_pred CeEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehhhhHHHhcC
Confidence 599999999999999999999999987 9999999999988877643
|
| >3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0 | Back alignment and structure |
|---|
Probab=92.47 E-value=0.11 Score=46.10 Aligned_cols=113 Identities=19% Similarity=0.127 Sum_probs=63.7
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCCcc
Q 012083 16 TNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDDRK 95 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 95 (471)
++||||+.-=-+. +---+.+|+++|.+ +|+|+++.+...+.-.-.+. .....+++..+.++. ..-..
T Consensus 10 ~~m~ILlTNDDGi-~apGi~aL~~~l~~-~~~V~VVAP~~~~Sg~g~si---------Tl~~pl~~~~~~~~~--~~v~G 76 (261)
T 3ty2_A 10 PKLRLLLSNDDGV-YAKGLAILAKTLAD-LGEVDVVAPDRNRSGASNSL---------TLNAPLHIKNLENGM--ISVEG 76 (261)
T ss_dssp -CCEEEEECSSCT-TCHHHHHHHHHHTT-TSEEEEEEESSCCTTCTTCC---------CCSSCEEEEECTTSC--EEESS
T ss_pred CCCeEEEEcCCCC-CCHHHHHHHHHHHh-cCCEEEEecCCCCcCcccce---------ecCCCeEEEEecCCe--EEECC
Confidence 3589888764333 44557788999987 89999999987776544321 223356776654321 00011
Q ss_pred cHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEEC----------CCcch---HHHHHHHcCCceEEEeC
Q 012083 96 DEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIAD----------VTFGW---ALQVAAKLELKKASIYT 156 (471)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D----------~~~~~---~~~~A~~lgiP~v~~~~ 156 (471)
.+.+ |-.+ -+..+.. .+||+||+. ..++. |+.-|..+|||.|.+|.
T Consensus 77 TPaD-CV~l----------al~~l~~----~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 135 (261)
T 3ty2_A 77 TPTD-CVHL----------AITGVLP----EMPDMVVAGINAGPNLGDDVWYSGTVAAAMEGRFLGLPALAVSL 135 (261)
T ss_dssp CHHH-HHHH----------HTTTTSS----SCCSEEEEEEEESCCCGGGGGTCHHHHHC-CCSTTSCCEEEEEE
T ss_pred CHHH-HHHH----------HHHHhcC----CCCCEEEECCcCCCCCCCCcCCchHHHHHHHHHHcCCCeEEEEc
Confidence 2211 1111 1122222 689999963 22332 23344678999999875
|
| >2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=90.92 E-value=0.77 Score=40.79 Aligned_cols=112 Identities=13% Similarity=0.146 Sum_probs=61.7
Q ss_pred cEEEEEcCCCcccH-HHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCCccc
Q 012083 18 VHVLLVSFPAQGHV-ASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDDRKD 96 (471)
Q Consensus 18 ~~Il~~~~~~~GH~-~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 96 (471)
.|||+.- --|-. --+.+|+++|.+.|| |+++.+...+.-.-.+. +....+++..+...... .-.+.
T Consensus 2 p~ILlTN--DDGi~apGi~~L~~~l~~~g~-V~VvAP~~~~Sg~g~si---------T~~~pl~~~~~~~~~~~-~v~GT 68 (251)
T 2wqk_A 2 PTFLLVN--DDGYFSPGINALREALKSLGR-VVVVAPDRNLSGVGHSL---------TFTEPLKMRKIDTDFYT-VIDGT 68 (251)
T ss_dssp CEEEEEC--SSCTTCHHHHHHHHHHTTTSE-EEEEEESSCCTTSCCSC---------CCSSCEEEEEEETTEEE-ETTCC
T ss_pred CEEEEEc--CCCCCcHHHHHHHHHHHhCCC-EEEEeeCCCCcccccCc---------CCCCCceeEEeecccee-ecCCC
Confidence 6777654 33323 346788999999984 88888877665443221 22335666544321000 00112
Q ss_pred HHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEE----------CCCcc---hHHHHHHHcCCceEEEeC
Q 012083 97 EAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIA----------DVTFG---WALQVAAKLELKKASIYT 156 (471)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~----------D~~~~---~~~~~A~~lgiP~v~~~~ 156 (471)
+.+ |-.+. +..++. + .+||+||+ |..++ +|+.-|..+|||.|.+|.
T Consensus 69 PaD-CV~la------l~~~l~---~----~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S~ 127 (251)
T 2wqk_A 69 PAD-CVHLG------YRVILE---E----KKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSA 127 (251)
T ss_dssp HHH-HHHHH------HHTTTT---T----CCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred hHH-HHhhh------hhhhcC---C----CCCCEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEEc
Confidence 221 11111 112222 2 68999997 33333 566777899999999874
|
| >3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=90.71 E-value=2.2 Score=39.41 Aligned_cols=35 Identities=11% Similarity=0.176 Sum_probs=25.1
Q ss_pred CCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 012083 15 KTNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 15 ~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
|++|||+|+..+.. .+...++|.++||+|..+.+.
T Consensus 5 ~~~mrivf~Gt~~f-----a~~~L~~L~~~~~~v~~Vvt~ 39 (318)
T 3q0i_A 5 SQSLRIVFAGTPDF-----AARHLAALLSSEHEIIAVYTQ 39 (318)
T ss_dssp --CCEEEEECCSHH-----HHHHHHHHHTSSSEEEEEECC
T ss_pred ccCCEEEEEecCHH-----HHHHHHHHHHCCCcEEEEEcC
Confidence 35799999987643 345568888899999866663
|
| >1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A* | Back alignment and structure |
|---|
Probab=90.31 E-value=2.4 Score=35.95 Aligned_cols=98 Identities=10% Similarity=0.016 Sum_probs=63.5
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcc------hhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCC
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFI------CERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEP 90 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 90 (471)
+-.|++++..+.|=..-.+++|.+.+.+|++|.|+..-.. ...+... ++++.....++..
T Consensus 28 ~g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF~Kg~~~~gE~~~l~~L--------------~v~~~~~g~gf~~ 93 (196)
T 1g5t_A 28 RGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFIKGTWPNGERNLLEPH--------------GVEFQVMATGFTW 93 (196)
T ss_dssp CCCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEESSCCSSCCHHHHHHGGG--------------TCEEEECCTTCCC
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEeeCCCCCccHHHHHHhC--------------CcEEEEccccccc
Confidence 3468888888899999999999999999999999955432 1222222 5778777664432
Q ss_pred CCCcccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcc
Q 012083 91 EDDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFG 138 (471)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~ 138 (471)
. ..+..+ -.......+....+.+.. .++|+||.|-...
T Consensus 94 ~--~~~~~~----~~~~a~~~l~~a~~~l~~----~~yDlvILDEi~~ 131 (196)
T 1g5t_A 94 E--TQNREA----DTAACMAVWQHGKRMLAD----PLLDMVVLDELTY 131 (196)
T ss_dssp C--GGGHHH----HHHHHHHHHHHHHHHTTC----TTCSEEEEETHHH
T ss_pred C--CCCcHH----HHHHHHHHHHHHHHHHhc----CCCCEEEEeCCCc
Confidence 2 111111 111224445555555544 7999999998754
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* | Back alignment and structure |
|---|
Probab=90.02 E-value=1.4 Score=45.00 Aligned_cols=46 Identities=17% Similarity=0.112 Sum_probs=33.1
Q ss_pred CCcEEE---eccchh---------hhhccCcceeeeecc---C-cchhhHhhhcCCceeecccc
Q 012083 344 DFGKMV---KWAPQE---------KVLAHPSVACYLTHC---G-WNSTMEGISMGVPFLCWPWG 391 (471)
Q Consensus 344 ~nv~~~---~~vpq~---------~lL~~~~~~~~ItHg---G-~~s~~eal~~GvP~l~~P~~ 391 (471)
++|+++ .|++.. .+++.+++ ||.-. | -.+.+||+++|+|+|+.-..
T Consensus 490 drVKVIf~P~~L~~~d~lf~~d~~~~~~~adv--fV~PS~~EgfGl~~LEAmA~G~PvI~s~~g 551 (725)
T 3nb0_A 490 DRVKMIFHPEFLNANNPILGLDYDEFVRGCHL--GVFPSYYEPWGYTPAECTVMGVPSITTNVS 551 (725)
T ss_dssp CSEEEEECCSCCCTTCSSSCCCHHHHHHHCSE--EECCCSSBSSCHHHHHHHHTTCCEEEETTB
T ss_pred CceeEEEeccccCCCCccchhHHHHHHhhceE--EEeccccCCCCHHHHHHHHcCCCEEEeCCC
Confidence 566654 888764 47877777 66543 3 45899999999999987553
|
| >1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A* | Back alignment and structure |
|---|
Probab=88.11 E-value=1.5 Score=38.80 Aligned_cols=113 Identities=9% Similarity=0.077 Sum_probs=63.3
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCC-CC-CCcc
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLE-PE-DDRK 95 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~-~~~~ 95 (471)
||||+.-=-+. |---+.+|+++|++.| +|+++.+...+.-+-.+. .....+++..+..+-. .. .-..
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~si---------Tl~~pl~~~~~~~~~~~~~~~v~G 69 (247)
T 1j9j_A 1 MRILVTNDDGI-QSKGIIVLAELLSEEH-EVFVVAPDKERSATGHSI---------TIHVPLWMKKVFISERVVAYSTTG 69 (247)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTCTTCC---------CCSSCCCEEECCCSSSEEEEEESS
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccc---------cCCCCeEEEEeccCCCCceEEECC
Confidence 46665542222 3344788999999888 899999987766554331 2223566666543200 00 0011
Q ss_pred cHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEEC----------CCcc---hHHHHHHHcCCceEEEeC
Q 012083 96 DEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIAD----------VTFG---WALQVAAKLELKKASIYT 156 (471)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D----------~~~~---~~~~~A~~lgiP~v~~~~ 156 (471)
.+.+ ++.--+..+.. .+||+||+. ..++ +|+.-|..+|||.|.++.
T Consensus 70 TPaD-----------CV~lal~~l~~----~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 128 (247)
T 1j9j_A 70 TPAD-----------CVKLAYNVVMD----KRVDLIVSGVNRGPNMGMDILHSGTVSGAMEGAMMNIPSIAISS 128 (247)
T ss_dssp CHHH-----------HHHHHHHTTST----TCCSEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred cHHH-----------HHHHHHHhhcc----CCCCEEEECCccCCCCCcCeecchhHHHHHHHHhcCCCeEEEec
Confidence 1211 11111222322 689999963 2322 456677889999999975
|
| >1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1 | Back alignment and structure |
|---|
Probab=87.71 E-value=1.4 Score=39.71 Aligned_cols=113 Identities=12% Similarity=-0.022 Sum_probs=63.1
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCC-CCccc
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPE-DDRKD 96 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~ 96 (471)
||||+.-=-+. +---+.+|+++|++.| +|+++.+...+.-+-.+. .....+++..++.+-... .-.+.
T Consensus 1 M~ILlTNDDGi-~ApGi~aL~~aL~~~g-~V~VVAP~~~qSg~g~si---------Tl~~pl~~~~~~~~~~~~~~v~GT 69 (280)
T 1l5x_A 1 MKILVTNDDGV-HSPGLRLLYQFALSLG-DVDVVAPESPKSATGLGI---------TLHKPLRMYEVDLCGFRAIATSGT 69 (280)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHGGGS-EEEEEEESSCTTTSCSSC---------CCSSCBCEEEEECSSSEEEEESSC
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccc---------cCCCCeEEEEeccCCCceEEECCc
Confidence 46666542222 3344788999999988 899999987766543321 222345555543210000 00112
Q ss_pred HHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEEC-----------CCcc---hHHHHHHHcCCceEEEeCc
Q 012083 97 EAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIAD-----------VTFG---WALQVAAKLELKKASIYTS 157 (471)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D-----------~~~~---~~~~~A~~lgiP~v~~~~~ 157 (471)
+.+ ++.--+..+ . .+||+||+. .+++ +|+.-|..+|||.|.++..
T Consensus 70 PaD-----------CV~lal~~l-~----~~PDLVvSGIN~G~Nlg~d~v~ySGTVgAA~Ea~~~GiPaIA~S~~ 128 (280)
T 1l5x_A 70 PSD-----------TVYLATFGL-G----RKYDIVLSGINLGDNTSLQVILSSGTLGAAFQAALLGIPALAYSAY 128 (280)
T ss_dssp HHH-----------HHHHHHHHH-T----SCCSEEEEEEEEBCCCSHHHHTTCHHHHHHHHHHHTTCCEEEEEEC
T ss_pred HHH-----------HHHHHHhcC-C----CCCCEEEECCccCCcCCccccccchhHHHHHHHHHcCCCeEEEEcc
Confidence 211 111122333 3 699999963 2222 4566678899999999864
|
| >3io3_A DEHA2D07832P; chaperone, membrane traffic, ATPase; HET: ADP; 1.80A {Debaryomyces hansenii} | Back alignment and structure |
|---|
Probab=87.59 E-value=2 Score=40.21 Aligned_cols=45 Identities=13% Similarity=0.180 Sum_probs=35.9
Q ss_pred cCCCCcEEEEEc-CCCcccHHHHHHHHHHHH--hCCCeEEEEeCCcch
Q 012083 13 LNKTNVHVLLVS-FPAQGHVASLMKLAHRLA--DCRIKVTFVTTEFIC 57 (471)
Q Consensus 13 m~~~~~~Il~~~-~~~~GH~~p~~~La~~L~--~rGh~Vt~~~~~~~~ 57 (471)
++.+.++|+|++ -|+-|=..-..+||..|+ ++|++|.++......
T Consensus 13 l~~~~~~i~~~~gkGGvGKTt~a~~lA~~la~~~~g~~vllid~D~~~ 60 (348)
T 3io3_A 13 VQHDSLKWIFVGGKGGVGKTTTSSSVAVQLALAQPNEQFLLISTDPAH 60 (348)
T ss_dssp HTCTTCSEEEEECSTTSSHHHHHHHHHHHHHHHCTTSCEEEEECCSSC
T ss_pred hcCCCcEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCCeEEEEECCCCC
Confidence 444456777665 467799999999999999 899999999987543
|
| >4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A* | Back alignment and structure |
|---|
Probab=87.21 E-value=3.8 Score=34.61 Aligned_cols=82 Identities=13% Similarity=0.094 Sum_probs=52.8
Q ss_pred EEE-EE-cCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCCccc
Q 012083 19 HVL-LV-SFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDDRKD 96 (471)
Q Consensus 19 ~Il-~~-~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 96 (471)
|++ |. +-|+-|=..-...||..|+++|++|.++-.........-.. ....++.+.+.+.
T Consensus 2 ~vi~v~s~kgG~GKTt~a~~la~~la~~g~~vlliD~D~~~~~~~~~~---------~~~~~~~~~~~~~---------- 62 (206)
T 4dzz_A 2 KVISFLNPKGGSGKTTAVINIATALSRSGYNIAVVDTDPQMSLTNWSK---------AGKAAFDVFTAAS---------- 62 (206)
T ss_dssp EEEEECCSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHT---------TSCCSSEEEECCS----------
T ss_pred eEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEECCCCCCHHHHHh---------cCCCCCcEEecCc----------
Confidence 544 44 34577889999999999999999999997654433322221 1122455544321
Q ss_pred HHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCc
Q 012083 97 EAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTF 137 (471)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~ 137 (471)
..+.+.++.+. .++|+||.|.-.
T Consensus 63 -------------~~l~~~l~~l~-----~~yD~viiD~~~ 85 (206)
T 4dzz_A 63 -------------EKDVYGIRKDL-----ADYDFAIVDGAG 85 (206)
T ss_dssp -------------HHHHHTHHHHT-----TTSSEEEEECCS
T ss_pred -------------HHHHHHHHHhc-----CCCCEEEEECCC
Confidence 34555666654 479999999753
|
| >2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=86.85 E-value=6.5 Score=33.92 Aligned_cols=103 Identities=12% Similarity=0.071 Sum_probs=57.2
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCC--eEEEEe-CCcc---hhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCC
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRI--KVTFVT-TEFI---CERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPE 91 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh--~Vt~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 91 (471)
|||+|+..++.+ .+.++.++|.+.+| +|..+. .+.. .+..++. |+.+..++..-
T Consensus 2 ~rI~vl~SG~g~---~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~~~~~A~~~--------------gIp~~~~~~~~--- 61 (216)
T 2ywr_A 2 LKIGVLVSGRGS---NLQAIIDAIESGKVNASIELVISDNPKAYAIERCKKH--------------NVECKVIQRKE--- 61 (216)
T ss_dssp EEEEEEECSCCH---HHHHHHHHHHTTSSCEEEEEEEESCTTCHHHHHHHHH--------------TCCEEECCGGG---
T ss_pred CEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEeCCCChHHHHHHHHc--------------CCCEEEeCccc---
Confidence 799998766653 46777888888888 766554 4322 2233434 77766543210
Q ss_pred CCcccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcc-hHHHHHHHcCCceEEEeCc
Q 012083 92 DDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFG-WALQVAAKLELKKASIYTS 157 (471)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~-~~~~~A~~lgiP~v~~~~~ 157 (471)
..+ .....+.+.+.+++ .+||+||+-.+.. -...+-+...-.++=++++
T Consensus 62 --~~~--------r~~~~~~~~~~l~~-------~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 111 (216)
T 2ywr_A 62 --FPS--------KKEFEERMALELKK-------KGVELVVLAGFMRILSHNFLKYFPNKVINIHPS 111 (216)
T ss_dssp --SSS--------HHHHHHHHHHHHHH-------TTCCEEEESSCCSCCCHHHHTTSTTCEEEEESS
T ss_pred --ccc--------hhhhhHHHHHHHHh-------cCCCEEEEeCchhhCCHHHHhhccCCeEEEcCC
Confidence 000 01112223334444 8999999876533 3444445555567776654
|
| >2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A | Back alignment and structure |
|---|
Probab=86.79 E-value=3.6 Score=38.14 Aligned_cols=102 Identities=7% Similarity=-0.034 Sum_probs=56.7
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC-C-------cchhhhHHhhhcCCCCccCCCCCCeEEEeCCCC
Q 012083 16 TNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTT-E-------FICERIKESRQLGSFSEMGDAQQLVRIVPLPDG 87 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~-~-------~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 87 (471)
++|||+|+. --+....+.++|.++||+|..+.+ + ...+...+. |+.+.....
T Consensus 21 ~~mrIvf~G-----~~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~~~~~v~~~A~~~--------------gIpv~~~~~- 80 (329)
T 2bw0_A 21 QSMKIAVIG-----QSLFGQEVYCHLRKEGHEVVGVFTVPDKDGKADPLGLEAEKD--------------GVPVFKYSR- 80 (329)
T ss_dssp CCCEEEEEC-----CHHHHHHHHHHHHHTTCEEEEEEECCCCSSCCCHHHHHHHHH--------------TCCEEECSC-
T ss_pred CCCEEEEEc-----CcHHHHHHHHHHHHCCCeEEEEEeCCCcCCCCCHHHHHHHHc--------------CCCEEecCc-
Confidence 358999993 224444677899999999886654 2 122233333 666655422
Q ss_pred CCCCCCcccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcc-hHHHHHHHcCCceEEEeCch
Q 012083 88 LEPEDDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFG-WALQVAAKLELKKASIYTSA 158 (471)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~-~~~~~A~~lgiP~v~~~~~~ 158 (471)
+... ....+ ++++.++. .+||++|+-.+.. -...+-+.....++-++++.
T Consensus 81 ~~~~--------------~~~~~---~~~~~l~~----~~~Dliv~a~y~~ilp~~il~~~~~g~iNiHpSL 131 (329)
T 2bw0_A 81 WRAK--------------GQALP---DVVAKYQA----LGAELNVLPFCSQFIPMEIISAPRHGSIIYHPSL 131 (329)
T ss_dssp CEET--------------TEECH---HHHHHHHT----TCCSEEEESSCSSCCCHHHHTCSTTCEEEEESSC
T ss_pred cccc--------------ccccH---HHHHHHHh----cCCCEEEEeehhhhCCHHHHhhCcCCEEEEcCCc
Confidence 1000 01112 23333444 8999999876533 33444455556677777654
|
| >3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=86.42 E-value=0.72 Score=39.44 Aligned_cols=50 Identities=18% Similarity=0.074 Sum_probs=38.7
Q ss_pred cccCCCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhh
Q 012083 11 ESLNKTNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERI 60 (471)
Q Consensus 11 ~~m~~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~ 60 (471)
++|..+++||++-..|+.+=+.=...+.+.|+++|++|.++.++.....+
T Consensus 1 ~~m~l~~k~I~lgiTGs~aa~~k~~~ll~~L~~~g~eV~vv~T~~A~~~i 50 (201)
T 3lqk_A 1 GHMNFAGKHVGFGLTGSHCTYHEVLPQMERLVELGAKVTPFVTHTVQTTD 50 (201)
T ss_dssp --CCCTTCEEEEECCSCGGGGGGTHHHHHHHHHTTCEEEEECSSCSCCTT
T ss_pred CCCCcCCCEEEEEEEChHHHHHHHHHHHHHHhhCCCEEEEEEChhHHHHH
Confidence 35666678999998888554437899999999999999999987665444
|
| >2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A | Back alignment and structure |
|---|
Probab=85.97 E-value=2.8 Score=36.90 Aligned_cols=111 Identities=14% Similarity=0.137 Sum_probs=63.9
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCC-----
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPED----- 92 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~----- 92 (471)
||||+.-=-+. +---+.+|+++|++.| +|+++.+...+.-+-.+. .....+++..++.+.+..+
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~si---------Tl~~pl~~~~~~~~~~~~~~~~~~ 69 (244)
T 2e6c_A 1 MRILVTNDDGI-YSPGLWALAEAASQFG-EVFVAAPDTEQSAAGHAI---------TIAHPVRAYPHPSPLHAPHFPAYR 69 (244)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEECSSCCCCCSSC---------CCSSCBEEEECCCCTTSCCCCEEE
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccc---------cCCCCeEEEEeccCcCCCCCceEE
Confidence 46666542222 3334778999999888 899999987765443321 2334677777754211000
Q ss_pred CcccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEEC----------CCcc---hHHHHHHHcCCceEEEeC
Q 012083 93 DRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIAD----------VTFG---WALQVAAKLELKKASIYT 156 (471)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D----------~~~~---~~~~~A~~lgiP~v~~~~ 156 (471)
-...+.+ |-.+. +. + . .+||+||+. .+++ +|+.-|..+|||.|.++.
T Consensus 70 v~GTPaD-CV~la----------l~-l-~----~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 129 (244)
T 2e6c_A 70 VRGTPAD-CVALG----------LH-L-F----GPVDLVLSGVNLGSNLGHEIWHSGTVAAAKQGYLFGLSAAAFSV 129 (244)
T ss_dssp EESCHHH-HHHHH----------HH-H-S----CSCCEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCEEEEEEE
T ss_pred EcCcHHH-HHHHH----------Hc-C-C----CCCCEEEECCccCCCCCcCeechHhHHHHHHHHhcCCCeEEEec
Confidence 0112221 11111 11 2 2 699999963 2322 456677889999999874
|
| >2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=85.92 E-value=3.1 Score=34.08 Aligned_cols=45 Identities=20% Similarity=0.271 Sum_probs=37.9
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhh
Q 012083 16 TNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERI 60 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~ 60 (471)
++.||++.+.++-.|-....-++..|..+|++|.........+.+
T Consensus 17 ~~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~~p~e~l 61 (161)
T 2yxb_A 17 RRYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLRQTPEQV 61 (161)
T ss_dssp CSCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSBCCHHHH
T ss_pred CCCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHHH
Confidence 457999999999999999999999999999999988765444333
|
| >3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A | Back alignment and structure |
|---|
Probab=85.62 E-value=2.6 Score=37.16 Aligned_cols=34 Identities=24% Similarity=0.388 Sum_probs=28.1
Q ss_pred cEEEEEcCC--CcccHHHHHHHHHHHHhCCCeEEEE
Q 012083 18 VHVLLVSFP--AQGHVASLMKLAHRLADCRIKVTFV 51 (471)
Q Consensus 18 ~~Il~~~~~--~~GH~~p~~~La~~L~~rGh~Vt~~ 51 (471)
+|.+|++.. .-|=..-.+.|++.|+++|.+|.++
T Consensus 21 ~k~i~ItgT~t~vGKT~vs~gL~~~L~~~G~~V~~f 56 (242)
T 3qxc_A 21 GHMLFISATNTNAGKTTCARLLAQYCNACGVKTILL 56 (242)
T ss_dssp CEEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CcEEEEEeCCCCCcHHHHHHHHHHHHHhCCCceEEE
Confidence 676666644 4578888999999999999999987
|
| >3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0 | Back alignment and structure |
|---|
Probab=85.47 E-value=5 Score=34.56 Aligned_cols=108 Identities=8% Similarity=0.090 Sum_probs=57.9
Q ss_pred cCCCCcEEEEEcCCCcccHHHHHHHHHHHHh-CCCeEEEEeCCcc----hhhhHHhhhcCCCCccCCCCCCeEEEeCCCC
Q 012083 13 LNKTNVHVLLVSFPAQGHVASLMKLAHRLAD-CRIKVTFVTTEFI----CERIKESRQLGSFSEMGDAQQLVRIVPLPDG 87 (471)
Q Consensus 13 m~~~~~~Il~~~~~~~GH~~p~~~La~~L~~-rGh~Vt~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 87 (471)
|+.+++||+++..+..+.+. +|.++..+ .+++|..+.+... .+..++. |+.+..++..
T Consensus 1 ~~~~~~riavl~SG~Gsnl~---all~~~~~~~~~eI~~Vis~~~~a~~~~~A~~~--------------gIp~~~~~~~ 63 (215)
T 3tqr_A 1 MNREPLPIVVLISGNGTNLQ---AIIGAIQKGLAIEIRAVISNRADAYGLKRAQQA--------------DIPTHIIPHE 63 (215)
T ss_dssp ---CCEEEEEEESSCCHHHH---HHHHHHHTTCSEEEEEEEESCTTCHHHHHHHHT--------------TCCEEECCGG
T ss_pred CCCCCcEEEEEEeCCcHHHH---HHHHHHHcCCCCEEEEEEeCCcchHHHHHHHHc--------------CCCEEEeCcc
Confidence 56678999988877655544 44444444 3688887665322 1233333 7777665321
Q ss_pred CCCCCCcccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcc-hHHHHHHHcCCceEEEeCc
Q 012083 88 LEPEDDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFG-WALQVAAKLELKKASIYTS 157 (471)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~-~~~~~A~~lgiP~v~~~~~ 157 (471)
-- .+-. ...+ ++++.+++ .+||+||+-.+.. -...+-+...-.++-++++
T Consensus 64 ~~-----~~r~--------~~d~---~~~~~l~~----~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 114 (215)
T 3tqr_A 64 EF-----PSRT--------DFES---TLQKTIDH----YDPKLIVLAGFMRKLGKAFVSHYSGRMINIHPS 114 (215)
T ss_dssp GS-----SSHH--------HHHH---HHHHHHHT----TCCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred cc-----Cchh--------HhHH---HHHHHHHh----cCCCEEEEccchhhCCHHHHhhccCCeEEeCcc
Confidence 00 0000 0112 33344444 8999999876533 4445556666667776654
|
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A* | Back alignment and structure |
|---|
Probab=84.80 E-value=3.1 Score=40.98 Aligned_cols=106 Identities=8% Similarity=-0.022 Sum_probs=69.4
Q ss_pred CcEEEeccchh---hhhccCcceeeee---ccCcch-hhHhhhcC---CceeecccccchhhhHHHHHhhhc-ceeeecC
Q 012083 345 FGKMVKWAPQE---KVLAHPSVACYLT---HCGWNS-TMEGISMG---VPFLCWPWGHDHLYIKSCICDDWK-IGLWLEP 413 (471)
Q Consensus 345 nv~~~~~vpq~---~lL~~~~~~~~It---HgG~~s-~~eal~~G---vP~l~~P~~~DQ~~na~~v~~~~G-~G~~~~~ 413 (471)
.|++.+.+|+. .+++.+++ |+. .=|+|. ..|++++| .|+|+--+.+ .+ ++ +| -|+.+++
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv--~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG----a~---~~-l~~~allVnP 422 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL--LIFNSTVDGQNLSTFEAPLVNERDADVILSETCG----AA---EV-LGEYCRSVNP 422 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE--EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBT----TH---HH-HGGGSEEECT
T ss_pred CEEEeCCCCHHHHHHHHHhccE--EEECcccccCChhHHHHHHhCCCCCCEEEeCCCC----CH---HH-hCCCEEEECC
Confidence 57777888864 67777777 443 458875 58999996 5555443322 12 22 33 4778865
Q ss_pred CCCCCcCHhHHHHHHHHHhCcH--HHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHh
Q 012083 414 DDNGIIGRHEIKRKVDELLSND--VVRKNALKLKELAQKSVTKEGSSSKNLEYFIKQIT 470 (471)
Q Consensus 414 ~~~~~~~~~~l~~~i~~ll~~~--~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~ 470 (471)
.+.++++++|.++|+++ +-+++.+++.+.+++ -....-.+.|++++.
T Consensus 423 -----~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~V~~-----~d~~~W~~~fl~~L~ 471 (496)
T 3t5t_A 423 -----FDLVEQAEAISAALAAGPRQRAEAAARRRDAARP-----WTLEAWVQAQLDGLA 471 (496)
T ss_dssp -----TBHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTT-----CBHHHHHHHHHHHHH
T ss_pred -----CCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH-----CCHHHHHHHHHHHHh
Confidence 47899999999999875 455555666665544 255666677777664
|
| >3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii} | Back alignment and structure |
|---|
Probab=84.70 E-value=7.9 Score=33.70 Aligned_cols=103 Identities=12% Similarity=0.047 Sum_probs=58.4
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhC--CCeEEEEeCC-cch---hhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCC
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADC--RIKVTFVTTE-FIC---ERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPE 91 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~r--Gh~Vt~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 91 (471)
|||+|+..++.+ .+.++.++|.+. +++|..+.+. ... +.+.+. |+.+..++..-
T Consensus 23 ~rI~~l~SG~g~---~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A~~~--------------gIp~~~~~~~~--- 82 (229)
T 3auf_A 23 IRIGVLISGSGT---NLQAILDGCREGRIPGRVAVVISDRADAYGLERARRA--------------GVDALHMDPAA--- 82 (229)
T ss_dssp EEEEEEESSCCH---HHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHHHHT--------------TCEEEECCGGG---
T ss_pred cEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHHHHc--------------CCCEEEECccc---
Confidence 899999766643 367777888876 6888755544 222 223333 78777553210
Q ss_pred CCcccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcc-hHHHHHHHcCCceEEEeCc
Q 012083 92 DDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFG-WALQVAAKLELKKASIYTS 157 (471)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~-~~~~~A~~lgiP~v~~~~~ 157 (471)
..+- ....+.+.+.+++ .+||+||+-.+.. -...+-+.+.-.++=+.++
T Consensus 83 --~~~r--------~~~~~~~~~~l~~-------~~~Dliv~agy~~IL~~~~l~~~~~~~iNiHpS 132 (229)
T 3auf_A 83 --YPSR--------TAFDAALAERLQA-------YGVDLVCLAGYMRLVRGPMLTAFPNRILNIHPS 132 (229)
T ss_dssp --SSSH--------HHHHHHHHHHHHH-------TTCSEEEESSCCSCCCHHHHHHSTTCEEEEESS
T ss_pred --ccch--------hhccHHHHHHHHh-------cCCCEEEEcChhHhCCHHHHhhccCCEEEEccC
Confidence 0000 1111223334444 8999999876633 4445556666667776653
|
| >3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A* | Back alignment and structure |
|---|
Probab=84.13 E-value=12 Score=33.13 Aligned_cols=37 Identities=19% Similarity=0.269 Sum_probs=29.5
Q ss_pred CCCcEEEEEcCC--CcccHHHHHHHHHHHHhCCCeEEEE
Q 012083 15 KTNVHVLLVSFP--AQGHVASLMKLAHRLADCRIKVTFV 51 (471)
Q Consensus 15 ~~~~~Il~~~~~--~~GH~~p~~~La~~L~~rGh~Vt~~ 51 (471)
.++||.+|++.. .-|=..-.+.|++.|+++|++|.++
T Consensus 23 ~~~m~~i~Itgt~t~vGKT~vt~gL~~~l~~~G~~V~~f 61 (251)
T 3fgn_A 23 QSHMTILVVTGTGTGVGKTVVCAALASAARQAGIDVAVC 61 (251)
T ss_dssp CSSCEEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred ccCCCEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEE
Confidence 345677666644 4578888999999999999999987
|
| >3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A* | Back alignment and structure |
|---|
Probab=83.62 E-value=7.1 Score=34.05 Aligned_cols=38 Identities=13% Similarity=0.043 Sum_probs=32.7
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEF 55 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~ 55 (471)
|||+|..-|+-|=..-...||..|+++|++|.++=...
T Consensus 1 mkI~vs~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~ 38 (254)
T 3kjh_A 1 MKLAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVDGDP 38 (254)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHHTTTCSCEEEEEECT
T ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 58999777788999999999999999999999885443
|
| >3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=83.37 E-value=7.5 Score=33.41 Aligned_cols=103 Identities=9% Similarity=0.020 Sum_probs=57.6
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhC--CCeEEEEeCCc-ch---hhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCC
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADC--RIKVTFVTTEF-IC---ERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPE 91 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~r--Gh~Vt~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 91 (471)
+||.++-.++.+ .+.++.++|.+. +|+|..+.+.. .. +...+. |+.+..++..-
T Consensus 4 ~ki~vl~sG~g~---~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~~~--------------gIp~~~~~~~~--- 63 (212)
T 3av3_A 4 KRLAVFASGSGT---NFQAIVDAAKRGDLPARVALLVCDRPGAKVIERAARE--------------NVPAFVFSPKD--- 63 (212)
T ss_dssp EEEEEECCSSCH---HHHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHHHT--------------TCCEEECCGGG---
T ss_pred cEEEEEEECCcH---HHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHHHc--------------CCCEEEeCccc---
Confidence 788888766644 366777888876 78987665542 22 223333 77766543210
Q ss_pred CCcccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcc-hHHHHHHHcCCceEEEeCc
Q 012083 92 DDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFG-WALQVAAKLELKKASIYTS 157 (471)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~-~~~~~A~~lgiP~v~~~~~ 157 (471)
..+- ....+.+.+.+++ .+||+||+-.+.. -...+-+.+.-.++=++++
T Consensus 64 --~~~~--------~~~~~~~~~~l~~-------~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 113 (212)
T 3av3_A 64 --YPSK--------AAFESEILRELKG-------RQIDWIALAGYMRLIGPTLLSAYEGKIVNIHPS 113 (212)
T ss_dssp --SSSH--------HHHHHHHHHHHHH-------TTCCEEEESSCCSCCCHHHHHHTTTCEEEEESS
T ss_pred --ccch--------hhhHHHHHHHHHh-------cCCCEEEEchhhhhCCHHHHhhhcCCEEEEecC
Confidence 0010 1112223333444 8999999876533 4445556666667776654
|
| >1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A | Back alignment and structure |
|---|
Probab=83.02 E-value=7.6 Score=35.65 Aligned_cols=34 Identities=15% Similarity=0.177 Sum_probs=24.1
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 012083 16 TNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTE 54 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~ 54 (471)
++|||+|+..+..+ ....++|.+.||+|..+.+.
T Consensus 2 ~~mrIvf~Gt~~fa-----~~~L~~L~~~~~~i~~Vvt~ 35 (314)
T 1fmt_A 2 ESLRIIFAGTPDFA-----ARHLDALLSSGHNVVGVFTQ 35 (314)
T ss_dssp CCCEEEEEECSHHH-----HHHHHHHHHTTCEEEEEECC
T ss_pred CCCEEEEEecCHHH-----HHHHHHHHHCCCcEEEEEeC
Confidence 35799999876432 45557777789999866554
|
| >3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0 | Back alignment and structure |
|---|
Probab=82.39 E-value=1.8 Score=35.99 Aligned_cols=45 Identities=11% Similarity=0.034 Sum_probs=37.3
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHH
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKE 62 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~ 62 (471)
++||++...|+.|=+. ...+.+.|+++|++|.++.++.....+..
T Consensus 5 ~k~IllgvTGs~aa~k-~~~ll~~L~~~g~~V~vv~T~~A~~fi~~ 49 (175)
T 3qjg_A 5 GENVLICLCGSVNSIN-ISHYIIELKSKFDEVNVIASTNGRKFING 49 (175)
T ss_dssp CCEEEEEECSSGGGGG-HHHHHHHHTTTCSEEEEEECTGGGGGSCH
T ss_pred CCEEEEEEeCHHHHHH-HHHHHHHHHHCCCEEEEEECcCHHHHhhH
Confidence 3689888888877665 88999999999999999999877765543
|
| >4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=82.10 E-value=6 Score=37.70 Aligned_cols=38 Identities=13% Similarity=0.064 Sum_probs=27.8
Q ss_pred ccCCCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012083 12 SLNKTNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEF 55 (471)
Q Consensus 12 ~m~~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~ 55 (471)
.| ++.+||+++..+.. .+.+++++++.|++|.++..+.
T Consensus 3 ~m-~~~~~ilI~g~g~~-----~~~~~~a~~~~G~~~v~v~~~~ 40 (403)
T 4dim_A 3 AM-YDNKRLLILGAGRG-----QLGLYKAAKELGIHTIAGTMPN 40 (403)
T ss_dssp ----CCCEEEEECCCGG-----GHHHHHHHHHHTCEEEEEECSS
T ss_pred cc-cCCCEEEEECCcHh-----HHHHHHHHHHCCCEEEEEcCCC
Confidence 34 34579999987754 3668999999999999997643
|
| >2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A | Back alignment and structure |
|---|
Probab=81.70 E-value=3.1 Score=36.88 Aligned_cols=111 Identities=14% Similarity=0.148 Sum_probs=62.5
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCCc-cc
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDDR-KD 96 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~ 96 (471)
||||+.-=-+. |---+.+|+++|++.| +|+++.+...+.-+-.+. .....++...+... .-.-. ..
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~L~~~g-~V~VVAP~~~~Sg~g~ai---------Tl~~Pl~~~~~~~~--~~~v~~GT 68 (254)
T 2v4n_A 2 MRILLSNDDGV-HAPGIQTLAKALREFA-DVQVVAPDRNRSGASNSL---------TLESSLRTFTFDNG--DIAVQMGT 68 (254)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTCTTCC---------CCSSCCEEEECTTS--CEEEETCC
T ss_pred CeEEEEcCCCC-CCHHHHHHHHHHHhCC-cEEEEeeCCCCcCccCCc---------CCCCCeEEEEeCCC--CeEECCCC
Confidence 57777643332 4444778999998876 999999988766554331 22235666655211 00011 22
Q ss_pred HHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEEC----------CCcc---hHHHHHHHcCCceEEEeC
Q 012083 97 EAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIAD----------VTFG---WALQVAAKLELKKASIYT 156 (471)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D----------~~~~---~~~~~A~~lgiP~v~~~~ 156 (471)
+.+ | +.--+..+.. .+||+||+. .+++ +|+.-|..+|||.|.++.
T Consensus 69 PaD-C----------V~lal~~ll~----~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 126 (254)
T 2v4n_A 69 PTD-C----------VYLGVNALMR----PRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSL 126 (254)
T ss_dssp HHH-H----------HHHHHHTTSS----SCCSEEEEEEEESCCCGGGGGGCHHHHHHHTTTTSSSCEEEEEE
T ss_pred HHH-H----------HHHHHhhccC----CCCCEeeeCCcCCCCCCCCeeccHHHHHHHHHHhcCCCeEEEec
Confidence 221 1 1111222222 689999963 3333 344555679999999875
|
| >3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=80.95 E-value=20 Score=28.86 Aligned_cols=37 Identities=11% Similarity=0.064 Sum_probs=30.0
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFI 56 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~ 56 (471)
..+++++..++. +.|++++++.|.++|.+|+++ ....
T Consensus 23 ~~~~llIaGG~G--ItPl~sm~~~l~~~~~~v~l~-g~r~ 59 (158)
T 3lrx_A 23 FGKILAIGAYTG--IVEVYPIAKAWQEIGNDVTTL-HVTF 59 (158)
T ss_dssp CSEEEEEEETTH--HHHHHHHHHHHHHHTCEEEEE-EECB
T ss_pred CCeEEEEEccCc--HHHHHHHHHHHHhcCCcEEEE-EeCC
Confidence 358888885553 999999999999999999998 5443
|
| >2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=80.80 E-value=1 Score=41.53 Aligned_cols=47 Identities=15% Similarity=0.255 Sum_probs=30.6
Q ss_pred cccCCCCcEEEEEcCCCcccHHHHHHHHHHHHhC-----C-CeEEEEeCCcchhhhHH
Q 012083 11 ESLNKTNVHVLLVSFPAQGHVASLMKLAHRLADC-----R-IKVTFVTTEFICERIKE 62 (471)
Q Consensus 11 ~~m~~~~~~Il~~~~~~~GH~~p~~~La~~L~~r-----G-h~Vt~~~~~~~~~~~~~ 62 (471)
.+|+.++|||+|+..|..|. .+|..|.+. | |+|+++..+...+.+.+
T Consensus 2 ~~m~~~~m~I~iiG~G~mG~-----~~a~~L~~~~~~~~g~~~V~~~~r~~~~~~l~~ 54 (317)
T 2qyt_A 2 NAMNQQPIKIAVFGLGGVGG-----YYGAMLALRAAATDGLLEVSWIARGAHLEAIRA 54 (317)
T ss_dssp -----CCEEEEEECCSHHHH-----HHHHHHHHHHHHTTSSEEEEEECCHHHHHHHHH
T ss_pred CCCCCCCCEEEEECcCHHHH-----HHHHHHHhCccccCCCCCEEEEEcHHHHHHHHh
Confidence 45666678999998777774 567888888 9 99999876333344443
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 471 | ||||
| d2pq6a1 | 473 | c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransfe | 2e-75 | |
| d2vcha1 | 471 | c.87.1.10 (A:6-476) Hydroquinone glucosyltransfera | 3e-71 | |
| d2c1xa1 | 450 | c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-gluc | 7e-69 | |
| d2acva1 | 461 | c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transf | 2e-66 | |
| d1rrva_ | 401 | c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Am | 3e-32 | |
| d1iira_ | 401 | c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycol | 2e-29 | |
| d1pn3a_ | 391 | c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA | 5e-25 |
| >d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]} Length = 473 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: (Iso)flavonoid glycosyltransferase species: Medicago truncatula [TaxId: 3880]
Score = 242 bits (618), Expect = 2e-75
Identities = 135/476 (28%), Positives = 225/476 (47%), Gaps = 33/476 (6%)
Query: 19 HVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQL 78
HV+++ +P QGH+ L KLA L +TFV TE+ +R+ +SR +F D
Sbjct: 3 HVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTD---- 58
Query: 79 VRIVPLPDGLEPEDDRKDEAK----MTRSISKVMPGYLEELIQKINQQEEDEKITCVIAD 134
+PDGL P + D ++ + +S+ K EL+ ++N +TC+++D
Sbjct: 59 FNFESIPDGLTPMEGDGDVSQDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSD 118
Query: 135 VTFGWALQVAAKLELKKASIYTSAPGILAMIMNIPKFIEAGIISSDG--IVIKNEKIELS 192
+ +Q A + EL ++S+ L +M+ F+E GII +
Sbjct: 119 CCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVERGIIPFKDESYLTNGCLETKV 178
Query: 193 PYLPA--ASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSANKIL 250
++P + + + + +M ++ + + IL F+EL L
Sbjct: 179 DWIPGLKNFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESDVINAL 238
Query: 251 PSIIP--------------VGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSI 296
S IP + N W ED CL WL+ + PGSV+Y FGS
Sbjct: 239 SSTIPSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGST 298
Query: 297 SKLSQQQFNELALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEK 356
+ ++ +Q E A GL + FL +RP + G S ++AD G + W PQ+K
Sbjct: 299 TVMTPEQLLEFAWGLANCKKSFLWIIRPDLVIGGSVIFSSEFTNEIADRGLIASWCPQDK 358
Query: 357 VLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDN 416
VL HPS+ +LTHCGWNST E I GVP LCWP+ D IC++W+IG+ ++ +
Sbjct: 359 VLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEIDTN-- 416
Query: 417 GIIGRHEIKRKVDELLSND---VVRKNALKLKELAQKSVTKEGSSSKNLEYFIKQI 469
+ R E+ + ++E+++ D +++ A++LK+ A+++ G S NL IK +
Sbjct: 417 --VKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKVIKDV 470
|
| >d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 471 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Hydroquinone glucosyltransferase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 231 bits (589), Expect = 3e-71
Identities = 116/468 (24%), Positives = 190/468 (40%), Gaps = 25/468 (5%)
Query: 19 HVLLVSFPAQGHVASLMKLAHRLADCR-IKVTFVTTEFICERIKESRQLGSFSEMGDAQQ 77
HV ++ P GH+ L++ A RL + VTFV + L S +
Sbjct: 3 HVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLDSLPSSISSVF 62
Query: 78 LVRIVPLPDGLEPEDDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTF 137
L P D + + E++++ ++++ P L ++ + E T ++ D+
Sbjct: 63 L----PPVDLTDLSSSTRIESRISLTVTRSNP-ELRKVFD--SFVEGGRLPTALVVDLFG 115
Query: 138 GWALQVAAKLELKKASIYTSAPGILAMIMNIPKFIEAGIISSDGIVIKNEKIELSPYLPA 197
A VA + + Y + +L+ +++PK E + P
Sbjct: 116 TDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSCEFRELTEPLMLPGCVPVAGK 175
Query: 198 ASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSANKILPSIIPVG 257
+ + + L + P + PVG
Sbjct: 176 DFLDPAQDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPGLDKPPVYPVG 235
Query: 258 PLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELAGQP 317
PL+ G+ E CL WLD QP GSV+Y +FGS L+ +Q NELALGL + Q
Sbjct: 236 PLVNIGKQEAKQTEES-ECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQR 294
Query: 318 FLCGVRPGFINGSSTNN------------PDGLVAKVADFG-KMVKWAPQEKVLAHPSVA 364
FL +R +S+ P G + + G + WAPQ +VLAHPS
Sbjct: 295 FLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTG 354
Query: 365 CYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEI 424
+LTHCGWNST+E + G+P + WP + + +D + L D+G++ R E+
Sbjct: 355 GFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDGLVRREEV 414
Query: 425 KRKVDELLSND---VVRKNALKLKELAQKSVTKEGSSSKNLEYFIKQI 469
R V L+ + VR +LKE A + + +G+S+K L +
Sbjct: 415 ARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVALKW 462
|
| >d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]} Length = 450 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: UDP glucose:flavonoid 3-o-glucosyltransferase species: Grape (Vitis vinifera) [TaxId: 29760]
Score = 224 bits (571), Expect = 7e-69
Identities = 103/461 (22%), Positives = 195/461 (42%), Gaps = 21/461 (4%)
Query: 17 NVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQ 76
N HV +++FP H A L+ + RLA F M Q
Sbjct: 1 NPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFH-----DSMHTMQ 55
Query: 77 QLVRIVPLPDGLEPEDDR-KDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADV 135
++ + DG+ + ++ P + + E ++C++AD
Sbjct: 56 CNIKSYDISDGVPEGYVFAGRPQEDIELFTRAAPESFRQGMVMAVA-ETGRPVSCLVADA 114
Query: 136 TFGWALQVAAKLELKKASIYTSAPGILAMIMNIPKFIEAGIISSDGIVIKNEKIELSPYL 195
+A +AA++ + +T+ P L+ + I + E +S ++E + P +
Sbjct: 115 FIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIGVSGI-QGREDELLNFIPGM 173
Query: 196 PAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSANKILPSIIP 255
+ +L + ++ + Q + + + F EL S L S +
Sbjct: 174 SKVRFRDLQEGIVFGNL-NSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLKSKLK 232
Query: 256 VGPLIA--NGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLEL 313
I N CL WL ++ P SV+Y +FG+++ + L+ LE
Sbjct: 233 TYLNIGPFNLITPPPVVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEA 292
Query: 314 AGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWN 373
+ PF+ +R + + P+G + K +G +V WAPQ +VLAH +V ++THCGWN
Sbjct: 293 SRVPFIWSLRDK----ARVHLPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWN 348
Query: 374 STMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLS 433
S E ++ GVP +C P+ D + D +IG+ + + G+ + + D++LS
Sbjct: 349 SLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRI---EGGVFTKSGLMSCFDQILS 405
Query: 434 ND---VVRKNALKLKELAQKSVTKEGSSSKNLEYFIKQITE 471
+ +R+N L+E A ++V +GSS++N + +++
Sbjct: 406 QEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVSK 446
|
| >d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]} Length = 461 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Triterpene UDP-glucosyl transferase UGT71G1 species: Medicago truncatula [TaxId: 3880]
Score = 218 bits (555), Expect = 2e-66
Identities = 102/479 (21%), Positives = 195/479 (40%), Gaps = 39/479 (8%)
Query: 11 ESLNKTNVHVLLVSFPAQGHVASLMKLAHRLAD--CRIKVTFVTTEFICERIKESRQLGS 68
+NK N ++ + P GH+AS ++ A L + + +T +F +S
Sbjct: 2 SDINK-NSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSV 60
Query: 69 FSEMGDAQQLVRIVPLPDGL-EPEDDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEK 127
+ ++++ LP+ P++ K + + + +++ I+ I K
Sbjct: 61 LASQPQ----IQLIDLPEVEPPPQELLKSPEFYILTFLESLIPHVKATIKTI----LSNK 112
Query: 128 ITCVIADVTFGWALQVAAKLELKKASIYTSAPGILAMIMNIPKFIEAGIISSDGIVIKNE 187
+ ++ D + V + + TS G L++++++ + + ++
Sbjct: 113 VVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQ------IEEVFDDSD 166
Query: 188 KIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSAN 247
+ +P S P + + + + + I+ F +L S+
Sbjct: 167 RDHQLLNIPGISNQVPSNVLPDACFNKDGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSI 226
Query: 248 KIL-------PSIIPVGPLI--ANGQPTGNFWSEDLTCLSWLDKQPPGS-VIYAAFGSIS 297
L P I VGPL+ ++ L WLD+QP S V
Sbjct: 227 DALYDHDEKIPPIYAVGPLLDLKGQPNPKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGV 286
Query: 298 KLSQQQFNELALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKM--VKWAPQE 355
Q E+ALGL+ +G FL + P+G + + GK WAPQ
Sbjct: 287 SFGPSQIREIALGLKHSGVRFLW-----SNSAEKKVFPEGFLEWMELEGKGMICGWAPQV 341
Query: 356 KVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPD- 414
+VLAH ++ +++HCGWNS +E + GVP L WP + + +W +GL L D
Sbjct: 342 EVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDY 401
Query: 415 --DNGIIGRHEIKRKVDELLSND-VVRKNALKLKELAQKSVTKEGSSSKNLEYFIKQIT 470
+ ++ EI++ + +L+ D +V K ++KE+++ +V GSS ++ I IT
Sbjct: 402 RKGSDVVAAEEIEKGLKDLMDKDSIVHKKVQEMKEMSRNAVVDGGSSLISVGKLIDDIT 460
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} Length = 401 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Score = 125 bits (313), Expect = 3e-32
Identities = 53/431 (12%), Positives = 107/431 (24%), Gaps = 48/431 (11%)
Query: 20 VLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLV 79
VLL +G V + LA RL ++ ER+ E V
Sbjct: 3 VLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAEVG--------------V 48
Query: 80 RIVPLPDGLEPEDDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGW 139
VP+ ++ +E + E + D+
Sbjct: 49 PHVPVGLPQHMMLQEGMPPPPPEEEQRLAAMTVEMQFDAVPGAAEGCAAVVAVGDLAAAT 108
Query: 140 ALQVAAKLELKKASIYTSAPGILAMIMNIPKFIEAGIISSDGIVIKNEKIELSPYLPAAS 199
++ A+ +P LA P + E + A+
Sbjct: 109 GVRSVAEKLGLPFFYSVPSPVYLASPHLPPAYDEPTTPGVT--------DIRVLWEERAA 160
Query: 200 PAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSANKILPSIIPVGPL 259
+ N + + + +L + + G
Sbjct: 161 RFADRYGPTLNRRRAEIGLPPVEDVFGYGHGERPLLAADPVLAPLQPD---VDAVQTGAW 217
Query: 260 IANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELAGQPFL 319
+ + + ++L P ++ FGS S ++A+ + Q
Sbjct: 218 LLS-----DERPLPPELEAFLAAGSP--PVHIGFGSSSGRGIADAAKVAVEA-IRAQGRR 269
Query: 320 CGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEGI 379
+ G+ ++ D + + + VA + H +
Sbjct: 270 VILSRGWTELVLPDDRDDC--------FAIDEVNFQALFRR--VAAVIHHGSAGTEHVAT 319
Query: 380 SMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRK 439
GVP L P D Y + IG+ + + + +L R
Sbjct: 320 RAGVPQLVIPRNTDQPYFAGRVA-ALGIGVAHDGPT---PTFESLSAALTTVL-APETRA 374
Query: 440 NALKLKELAQK 450
A + +
Sbjct: 375 RAEAVAGMVLT 385
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} Length = 401 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Score = 117 bits (292), Expect = 2e-29
Identities = 50/431 (11%), Positives = 104/431 (24%), Gaps = 49/431 (11%)
Query: 20 VLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLV 79
VLL + ++G L+ LA R+ D V ER+ E V
Sbjct: 3 VLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAEVG--------------V 48
Query: 80 RIVPLPDGLEPEDDRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGW 139
VP+ R + + + +I E +
Sbjct: 49 PHVPVGPSARAPIQRAK-PLTAEDVRRFTTEAIATQFDEIPAAAEGCAAVVTTGLLAAAI 107
Query: 140 ALQVAAKLELKKASIYTSAPGILAMIMNIPKFIEAGIISSDGIVIKNEKIELSPYLPAAS 199
++ A+ P + P + G + I++ +
Sbjct: 108 GVRSVAEKLGIPYFYAFHCPSYVPSPYYPPPPL--------GEPSTQDTIDIPAQWERNN 159
Query: 200 PAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSANKILPSIIPVGPL 259
+ + S + + +D LAP L ++ +
Sbjct: 160 QSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTDHPWVAADPVLAPLQPTDLDAVQTGAWI 219
Query: 260 IANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELAGQPFL 319
+ + L+ +Y FGS+ + G+ +
Sbjct: 220 LPD--------ERPLSPELAAFLDAGPPPVYLGFGSLG-APADAVRVAIDAIRAHGRRVI 270
Query: 320 CGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEGI 379
D ++ + + + VA + H G +T
Sbjct: 271 LSRGW----------ADLVLPDDGADCFAIGEVNHQVLFGR--VAAVIHHGGAGTTHVAA 318
Query: 380 SMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRK 439
G P + P D Y + + +G+ + + + L
Sbjct: 319 RAGAPQILLPQMADQPYYAGRVA-ELGVGVAHDGPI---PTFDSLSAALATAL-TPETHA 373
Query: 440 NALKLKELAQK 450
A + +
Sbjct: 374 RATAVAGTIRT 384
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} Length = 391 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Score = 104 bits (259), Expect = 5e-25
Identities = 47/435 (10%), Positives = 114/435 (26%), Gaps = 68/435 (15%)
Query: 20 VLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLV 79
VL+ ++G L+ LA RL + ER E V
Sbjct: 3 VLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAEVG--------------V 48
Query: 80 RIVPLPDGLEPEDDRKDEAKMTRSISKVMPGYLEELIQKINQQEED-EKITCVIADVTFG 138
+VP+ ++ ++ ++V+ + E K+ E + +
Sbjct: 49 PMVPVGR--AVRAGAREPGELPPGAAEVVTEVVAEWFDKVPAAIEGCDAVVTTGLLPAAV 106
Query: 139 WALQVAAKLELKKASIYTSAPGILAMIMNIPKFIEAGIISSDGIVIKNEKIELSPYLPAA 198
+A KL + S + +
Sbjct: 107 AVRSMAEKLGIPYRYTVLSPDHLPSEQSQA------------------------ERDMYN 142
Query: 199 SPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSANKILPSIIPVGP 258
A+ L+ N ++ + + L + + G
Sbjct: 143 QGADRLFGDAVNSHRASIGLPPVEHLYDYGYTDQPWLAA--DPVLSPLRPTDLGTVQTGA 200
Query: 259 LIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELAGQPF 318
I + + L V S + + +G+
Sbjct: 201 WILPDERPLSAE------LEAFLAAGSTPVYVGFGSSSRPATADAAKMAIKAVRASGRRI 254
Query: 319 LCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEG 378
+ + G+ + ++ +V +++ VA + H +T+
Sbjct: 255 V--LSRGWADLVLPDDGADCF--------VVGEVNLQELFGR--VAAAIHHDSAGTTLLA 302
Query: 379 ISMGVPFLCWPWGHDHLYIKSCICD---DWKIGLWLEPDDNGIIGRHEIKRKVDELLSND 435
+ G+P + D++ ++ D + +G+ ++ + +D L
Sbjct: 303 MRAGIPQIVVRRVVDNVVEQAYHADRVAELGVGVAVDGPV---PTIDSLSAALDTAL-AP 358
Query: 436 VVRKNALKLKELAQK 450
+R A + + +
Sbjct: 359 EIRARATTVADTIRA 373
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 471 | |||
| d2pq6a1 | 473 | (Iso)flavonoid glycosyltransferase {Medicago trunc | 100.0 | |
| d2c1xa1 | 450 | UDP glucose:flavonoid 3-o-glucosyltransferase {Gra | 100.0 | |
| d2vcha1 | 471 | Hydroquinone glucosyltransferase {Thale cress (Ara | 100.0 | |
| d2acva1 | 461 | Triterpene UDP-glucosyl transferase UGT71G1 {Medic | 100.0 | |
| d1rrva_ | 401 | TDP-vancosaminyltransferase GftD {Amycolatopsis or | 100.0 | |
| d1iira_ | 401 | UDP-glucosyltransferase GtfB {Amycolatopsis orient | 100.0 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 100.0 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 99.92 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 99.11 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.03 | |
| d1o6ca_ | 377 | UDP-N-acetylglucosamine 2-epimerase {Bacillus subt | 98.98 | |
| d1v4va_ | 373 | UDP-N-acetylglucosamine 2-epimerase {Thermus therm | 98.82 | |
| d1f6da_ | 376 | UDP-N-acetylglucosamine 2-epimerase {Escherichia c | 98.69 | |
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 98.57 | |
| d2f9fa1 | 166 | First mannosyl transferase WbaZ {Archaeoglobus ful | 97.92 | |
| d1pswa_ | 348 | ADP-heptose LPS heptosyltransferase II {Escherichi | 97.48 | |
| d2bfwa1 | 196 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 96.65 | |
| d1j9ja_ | 247 | SurE homolog TM1662 {Thermotoga maritima [TaxId: 2 | 92.9 | |
| d1gsoa2 | 105 | Glycinamide ribonucleotide synthetase (GAR-syn), N | 90.26 | |
| d1ccwa_ | 137 | Glutamate mutase, small subunit {Clostridium cochl | 89.97 | |
| d1uqta_ | 456 | Trehalose-6-phosphate synthase, OtsA {Escherichia | 87.83 | |
| d1u7za_ | 223 | Coenzyme A biosynthesis bifunctional protein CoaBC | 87.22 | |
| d1gsaa1 | 122 | Prokaryotic glutathione synthetase, N-terminal dom | 87.0 | |
| d2qy9a2 | 211 | GTPase domain of the signal recognition particle r | 83.63 | |
| d1j6ua1 | 89 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 83.53 | |
| d1l5xa_ | 276 | SurE homolog PAE2908 (SurE-alpha) {Archaeon Pyroba | 82.62 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 80.93 |
| >d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: (Iso)flavonoid glycosyltransferase species: Medicago truncatula [TaxId: 3880]
Probab=100.00 E-value=3.3e-57 Score=454.67 Aligned_cols=445 Identities=31% Similarity=0.588 Sum_probs=333.7
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCC----
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPED---- 92 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---- 92 (471)
|.||+|+|+|+.||++|+++||++|++|||+|||++++.+.+.+.+.+.... ......+++..++++.....
T Consensus 1 ~~hvl~~p~p~~gH~~P~~~lA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 76 (473)
T d2pq6a1 1 KPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKA----FDGFTDFNFESIPDGLTPMEGDGD 76 (473)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC----------------CEEEEEECCCCC-------
T ss_pred CCEEEEECchhhhHHHHHHHHHHHHHHCCCeEEEEeCcchHhHHhhccCccc----ccCCCCcceeecCCCCcccccccc
Confidence 4699999999999999999999999999999999999988887766542211 12234677888877666542
Q ss_pred CcccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEEEeCchHHHHHHHhchhhhh
Q 012083 93 DRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKASIYTSAPGILAMIMNIPKFI 172 (471)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~ 172 (471)
.......++..+.......+.+....+....+..++|+||.|....++..+|+++++|++.+++........+.+.+...
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~a~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 156 (473)
T d2pq6a1 77 VSQDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFV 156 (473)
T ss_dssp --CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHHHH
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeEEEecCcchhhHHHHHHhCCCceeeccccchhhhhhhcccccc
Confidence 33445566666666666666666666655444478999999999999999999999999999999888877777766655
Q ss_pred hhCCCCCCcccc-----cccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhchhhh
Q 012083 173 EAGIISSDGIVI-----KNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSAN 247 (471)
Q Consensus 173 ~~~~~~~~~~~~-----~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~ 247 (471)
.....+...... .......+|++......++. .+.....................+.....+.+++.+.+....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (473)
T d2pq6a1 157 ERGIIPFKDESYLTNGCLETKVDWIPGLKNFRLKDIV-DFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESDVI 235 (473)
T ss_dssp HTTCSSCSSGGGGTSSGGGCBCCSSTTCCSCBGGGSC-GGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESSCGGGGHHHH
T ss_pred cccCCCccccccccccccccccccCCCccccchhhhh-hhhhhcchhHHHHHHHHHHHHHHHhhhcccccchhhhhHhHH
Confidence 544443221111 11222344555444444444 344444445556677777777788899999999888766433
Q ss_pred hh----CCCcceeccccCCCC----------CCCCCCcCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHHHHh
Q 012083 248 KI----LPSIIPVGPLIANGQ----------PTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLEL 313 (471)
Q Consensus 248 ~~----~~~~~~vGp~~~~~~----------~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~ 313 (471)
.. .+...+.++...... ......+.+.+...|+.......++|+++||......+....++.++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~gs~~~~~~~~~~~~~~~~~~ 315 (473)
T d2pq6a1 236 NALSSTIPSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPEQLLEFAWGLAN 315 (473)
T ss_dssp HHHHTTCTTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCCHHHHHHHHHHHHH
T ss_pred HHHHhcCCcccccCCccccCCCCCCccccccCCcccccccHHHHHHhhhcCCCceeeeccCccccccHHHHHHHHHHHHh
Confidence 32 223333332221100 0112234456667888888878899999999999999999999999999
Q ss_pred CCCCEEEEEcCCCCCCCCCCCCchhHHhhCCCcEEEeccchhhhhccCcceeeeeccCcchhhHhhhcCCceeecccccc
Q 012083 314 AGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHD 393 (471)
Q Consensus 314 ~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~D 393 (471)
++.+++|+++..........+++++....++|+++++|+||.+||.||+|++||||||+||++||+++|||||++|++.|
T Consensus 316 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Nv~~~~~~Pq~~lL~hp~~~~fItHGG~~s~~Eal~~GVP~lv~P~~~D 395 (473)
T d2pq6a1 316 CKKSFLWIIRPDLVIGGSVIFSSEFTNEIADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFAD 395 (473)
T ss_dssp TTCEEEEECCGGGSTTTGGGSCHHHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTT
T ss_pred cCCeEEEEEccCCcccccccCcccchhhccCceEEeeeCCHHHHhcCCcCcEEEecCCccHHHHHHHcCCCEEeccchhh
Confidence 99999999976544444556788888888999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHH---HHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHh
Q 012083 394 HLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDV---VRKNALKLKELAQKSVTKEGSSSKNLEYFIKQIT 470 (471)
Q Consensus 394 Q~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~---~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~ 470 (471)
|+.||+|+++++|+|+.++ ..+|.++|.++|+++|+|++ ||+||++|++++++++++||+|++++++||++|.
T Consensus 396 Q~~na~rv~~~~G~G~~l~----~~~t~~~l~~ai~~vl~d~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~~~~~i~~~~ 471 (473)
T d2pq6a1 396 QPTDCRFICNEWEIGMEID----TNVKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKVIKDVL 471 (473)
T ss_dssp HHHHHHHHHHTSCCEEECC----SSCCHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHcCeEEeeC----CCcCHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Confidence 9999999955379999996 46899999999999999985 9999999999999999999999999999999985
|
| >d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: UDP glucose:flavonoid 3-o-glucosyltransferase species: Grape (Vitis vinifera) [TaxId: 29760]
Probab=100.00 E-value=4.7e-57 Score=451.46 Aligned_cols=436 Identities=23% Similarity=0.407 Sum_probs=324.1
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCC-Cccc
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPED-DRKD 96 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~ 96 (471)
.||+|+|+|++||++|+++||++|++|||+|||++.............. .......+++..++++++... ...+
T Consensus 2 ~hvl~~p~P~~gH~~p~l~la~~L~~rGH~Vt~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (450)
T d2c1xa1 2 PHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDS-----MHTMQCNIKSYDISDGVPEGYVFAGR 76 (450)
T ss_dssp CEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC------------CTTEEEEECCCCCCTTCCCCCC
T ss_pred CEEEEECchhHhHHHHHHHHHHHHHHCCCcEEEEEccCccchhhhhccc-----ccccCCCceeeecCCCCCcchhhccc
Confidence 5999999999999999999999999999999999754332222211100 012234688999988876652 2222
Q ss_pred HHHHHHHHHhhc-cHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEEEeCchHHHHHHHhchhhhhhhC
Q 012083 97 EAKMTRSISKVM-PGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKASIYTSAPGILAMIMNIPKFIEAG 175 (471)
Q Consensus 97 ~~~~~~~~~~~~-~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~ 175 (471)
....+..+.... ....+.+.+.+...+ .+||+||+|.+..++..+|+++|+|++.+++.+..........+......
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~Dlvi~D~~~~~~~~~a~~~~~p~v~~~~~~~~~~~~~~~~~~~~~~~ 154 (450)
T d2c1xa1 77 PQEDIELFTRAAPESFRQGMVMAVAETG--RPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKI 154 (450)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHT--CCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhHHHHHHHHHhCC--CCCeEEEECCccHHHHHHHHHhCCCEEEEecCchhhhhhhhccccccccc
Confidence 222223332222 222233333333333 79999999999999999999999999999999988877766665543332
Q ss_pred CCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhchhh----hhhCC
Q 012083 176 IISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSA----NKILP 251 (471)
Q Consensus 176 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~----~~~~~ 251 (471)
..+... ..........++...+...... ...........+.+......+....++.+..++..++.... .+..|
T Consensus 155 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p 232 (450)
T d2c1xa1 155 GVSGIQ-GREDELLNFIPGMSKVRFRDLQ-EGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLKSKLK 232 (450)
T ss_dssp CSSCCT-TCTTCBCTTSTTCTTCBGGGSC-TTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHHHSS
T ss_pred CCCccc-cccccccccCCcccchhHhhhh-hhhhcccchHHHHHHHHHHHhhhhcccccccccHHhhhhhhhhhccccCC
Confidence 222111 1112222334444444444433 33344444555666666667777888888888887765432 34467
Q ss_pred CcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCC
Q 012083 252 SIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELAGQPFLCGVRPGFINGSS 331 (471)
Q Consensus 252 ~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~ 331 (471)
++.++|+....... ...+.+.++..|+...+.+++||+++||......+.+..++.++++.+++|+|+.... ..
T Consensus 233 ~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~v~~s~gs~~~~~~~~~~~~~~~~~~~~~~vl~~~~~~----~~ 306 (450)
T d2c1xa1 233 TYLNIGPFNLITPP--PVVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSLRDK----AR 306 (450)
T ss_dssp CEEECCCHHHHC-----------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEEECCGG----GG
T ss_pred ceeecCCccccCCC--CCCcchhhhccccccCCccceeeecccccccCCHHHHHHHHHHHHhcCCeEEEEECCC----cc
Confidence 88888887665442 2234556777899988888899999999999999999999999999999999998765 34
Q ss_pred CCCCchhHHhhCCCcEEEeccchhhhhccCcceeeeeccCcchhhHhhhcCCceeecccccchhhhHHHHHhhhcceeee
Q 012083 332 TNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWL 411 (471)
Q Consensus 332 ~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~ 411 (471)
..+|+++..+.+.|+.+..|+||.++|.||+|++||||||+||++||+++|||||++|++.||+.||+|+++++|+|+.+
T Consensus 307 ~~l~~~~~~~~~~nv~~~~~~pq~~lL~hp~~~~fItHGG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l 386 (450)
T d2c1xa1 307 VHLPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRI 386 (450)
T ss_dssp GGSCTTHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEEC
T ss_pred ccCChhhhhhccccccccccCChHhhhccCceeEEEccCCccHHHHHHHcCCCEEecccccchHHHHHHHHHHcCcEEEe
Confidence 56788888889999999999999999999999999999999999999999999999999999999999997636999999
Q ss_pred cCCCCCCcCHhHHHHHHHHHhCcHHHH---HHHHHHHHHHHHHhhcCCChHHHHHHHHHHHhC
Q 012083 412 EPDDNGIIGRHEIKRKVDELLSNDVVR---KNALKLKELAQKSVTKEGSSSKNLEYFIKQITE 471 (471)
Q Consensus 412 ~~~~~~~~~~~~l~~~i~~ll~~~~~~---~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~~ 471 (471)
+. ..+|.++|.++|+++|+|++|| +|+++|++..++++.+||||.+++..+|+.+++
T Consensus 387 ~~---~~~t~~~l~~ai~~vL~d~~y~~~~~r~~~l~~~~~~a~~~~gss~~~~~~~~e~v~r 446 (450)
T d2c1xa1 387 EG---GVFTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVSK 446 (450)
T ss_dssp GG---GSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHTS
T ss_pred cC---CCcCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhh
Confidence 86 7899999999999999999776 688888888889999999999999999999864
|
| >d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Hydroquinone glucosyltransferase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=2.4e-53 Score=426.35 Aligned_cols=436 Identities=27% Similarity=0.413 Sum_probs=316.5
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHh-CCCeEEEEeCCcchhhh-HHhhhcCCCCccCCCCCCeEEEeCCCCCCCC-CCc
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLAD-CRIKVTFVTTEFICERI-KESRQLGSFSEMGDAQQLVRIVPLPDGLEPE-DDR 94 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~-rGh~Vt~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~ 94 (471)
.||+|+|+|++||++|+++||++|++ |||+|||++++.+.... ...+... ....+....++...... ...
T Consensus 2 ~hil~~p~p~~GH~~P~l~La~~L~~~rGH~Vt~v~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~ 74 (471)
T d2vcha1 2 PHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLDS-------LPSSISSVFLPPVDLTDLSSS 74 (471)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC--------CCTTEEEEECCCCCCTTSCTT
T ss_pred CEEEEECchhHhHHHHHHHHHHHHHHccCCEEEEEeCCCcchhhhhhccccc-------CCCCcceeecCcccccccccc
Confidence 49999999999999999999999964 89999999887654433 3332221 12256666666433332 345
Q ss_pred ccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEEEeCchHHHHHHHhchhhhhhh
Q 012083 95 KDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKASIYTSAPGILAMIMNIPKFIEA 174 (471)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~ 174 (471)
.+....+..+...+...+++..+.+.+.. ..+|+||.|....++..+++.+|+|++.+++.+......+.+.|.....
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~li~~~~~~~~~~~a~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 152 (471)
T d2vcha1 75 TRIESRISLTVTRSNPELRKVFDSFVEGG--RLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDET 152 (471)
T ss_dssp CCHHHHHHHHHHTTHHHHHHHHHHHHHTT--CCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhcC--CCCcEEEEeccchHHHHHHHHhCCCcccccccchhhHHHhhcCcccccc
Confidence 56667777777788888888887777655 7899999999999999999999999999999888776666655543222
Q ss_pred CCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhchhhhhh-----
Q 012083 175 GIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSANKI----- 249 (471)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~----- 249 (471)
..... ........+++...+...... ... ............+........+..+.+.+...+......
T Consensus 153 ~~~~~----~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (471)
T d2vcha1 153 VSCEF----RELTEPLMLPGCVPVAGKDFL-DPA--QDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPG 225 (471)
T ss_dssp CCSCG----GGCSSCBCCTTCCCBCGGGSC-GGG--SCTTSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHHSCC
T ss_pred cCccc----ccccccccccccccccccccc-ccc--cccchHHHHHHHHHHHhhcccccccchhHHHHHHHHHhhccccc
Confidence 11110 000111122222222222111 111 111222334444444556677777777766655432222
Q ss_pred --CCCcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHHHHhCCCCEEEEEcCCCC
Q 012083 250 --LPSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELAGQPFLCGVRPGFI 327 (471)
Q Consensus 250 --~~~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~ 327 (471)
.+.+.++++....... ....+...++.+|++.....+++|+++|+.....+..+..+..+++..+.+++|.+.....
T Consensus 226 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (471)
T d2vcha1 226 LDKPPVYPVGPLVNIGKQ-EAKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRSPSG 304 (471)
T ss_dssp TTCCCEEECCCCCCCSCS-CC-----CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEECCCCS
T ss_pred CCCCCccCcccccccCcc-ccccccchhHHHHHHhcCCccccccccccccCCCHHHHHHHHHHHHhhcCCeEEEeccccc
Confidence 2344555555433221 1234556788899999888899999999999999999999999999999999999876422
Q ss_pred CC------------CCCCCCchhHHh-hCCCcEEEeccchhhhhccCcceeeeeccCcchhhHhhhcCCceeecccccch
Q 012083 328 NG------------SSTNNPDGLVAK-VADFGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDH 394 (471)
Q Consensus 328 ~~------------~~~~lp~~~~~~-~~~nv~~~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ 394 (471)
.. ....+|+++... .++|+++++|+||.+||+||+|++||||||+||++||+++|||||++|+++||
T Consensus 305 ~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~w~Pq~~lL~hp~~~~fVtHGG~gS~~EAl~~GvP~v~~P~~~DQ 384 (471)
T d2vcha1 305 IANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQ 384 (471)
T ss_dssp STTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTH
T ss_pred cccccccccccccchhhhCCchhhhhccCCCeeecccCCHHHHhcCccCCEEEecCCccHHHHHHHcCCCEEEccccccc
Confidence 21 122366666554 47899999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHH---HHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHh
Q 012083 395 LYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDV---VRKNALKLKELAQKSVTKEGSSSKNLEYFIKQIT 470 (471)
Q Consensus 395 ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~---~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~ 470 (471)
+.||+|+++.+|+|+.+..++...+|+++|.++|+++|+|++ ||+||++|++++++++++||||.++++.||++.+
T Consensus 385 ~~nA~rv~e~lG~Gv~l~~~~~~~~t~~~l~~ai~~vl~~~~~~~~r~ra~~l~e~~~~a~~~gG~s~~~~~~~~~~~~ 463 (471)
T d2vcha1 385 KMNAVLLSEDIRAALRPRAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVALKWK 463 (471)
T ss_dssp HHHHHHHHHTTCCEECCCCCTTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHheeEEEEecCCCCcCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 999999965379999998755567999999999999999975 9999999999999999999999999999998764
|
| >d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Triterpene UDP-glucosyl transferase UGT71G1 species: Medicago truncatula [TaxId: 3880]
Probab=100.00 E-value=4.5e-54 Score=430.52 Aligned_cols=434 Identities=23% Similarity=0.390 Sum_probs=319.0
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEE--EeCCcc-hhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCC-C
Q 012083 17 NVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTF--VTTEFI-CERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPE-D 92 (471)
Q Consensus 17 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~ 92 (471)
+.||+|+|+|+.||++|+++||++|++|||+||+ ++++.. .......+.... ...+.+++..++++.... +
T Consensus 7 ~~hil~~p~P~~GH~~P~l~lA~~L~~rGH~V~vt~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 81 (461)
T d2acva1 7 NSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVL-----ASQPQIQLIDLPEVEPPPQE 81 (461)
T ss_dssp CEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHH-----CSCTTEEEEECCCCCCCCGG
T ss_pred CCeEEEecChhhhHHHHHHHHHHHHHHCCCCeEEEEEeCCccchhhhhhcccccc-----cCCCCeeEEECCCCCCchhh
Confidence 3799999999999999999999999999998764 455443 322232222111 445689999998776555 3
Q ss_pred CcccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEEEeCchHHHHHHHhchhhhh
Q 012083 93 DRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKASIYTSAPGILAMIMNIPKFI 172 (471)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~ 172 (471)
.......++..+.+.+.+.++++++.+.. .++|+||.|.+..++..+|+.+++|++.++++.........+.+...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~d~vi~d~~~~~~~~~a~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 157 (461)
T d2acva1 82 LLKSPEFYILTFLESLIPHVKATIKTILS----NKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQ 157 (461)
T ss_dssp GGGSHHHHHHHHHHHTHHHHHHHHHHHCC----TTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSC
T ss_pred hhhcHHHHHHHHHHHHHHHHHHHHHHhcc----CCCeEEEEeccchHHHHHHHHhCCCeEEEecccchhhHHhhcccccc
Confidence 44556666777788888889999988877 89999999999999999999999999999998887766655544321
Q ss_pred hhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhchhhh-----
Q 012083 173 EAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSAN----- 247 (471)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~----- 247 (471)
..... ...........+++........+...+.. ........+.+........+.++.+++..++....
T Consensus 158 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (461)
T d2acva1 158 IEEVF---DDSDRDHQLLNIPGISNQVPSNVLPDACF---NKDGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYD 231 (461)
T ss_dssp TTCCC---CCSSGGGCEECCTTCSSCEEGGGSCHHHH---CTTTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHHHH
T ss_pred ccccc---cccccccccccccccccchhhhhhhhhhh---ccchhHHHHHHHHHhhhccccccccccccccchhhhhhhh
Confidence 11100 01111111122222221111111100000 01112233344555567888888888777654322
Q ss_pred --hhCCCcceeccccCCCCCC--CCCCcCcchhcccccCCCCCcEEEEecCcc-ccCCHHHHHHHHHHHHhCCCCEEEEE
Q 012083 248 --KILPSIIPVGPLIANGQPT--GNFWSEDLTCLSWLDKQPPGSVIYAAFGSI-SKLSQQQFNELALGLELAGQPFLCGV 322 (471)
Q Consensus 248 --~~~~~~~~vGp~~~~~~~~--~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~-~~~~~~~~~~~~~al~~~~~~~i~~~ 322 (471)
+..++++++||........ ....+.+.++..|++..+...++++++|+. ...+.+.+..++.+++..+++++|..
T Consensus 232 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (461)
T d2acva1 232 HDEKIPPIYAVGPLLDLKGQPNPKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLWSN 311 (461)
T ss_dssp HCTTSCCEEECCCCCCSSCCCBTTBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEEEC
T ss_pred cccCCCCceeeccccccCCccCCCccccCcHHHHHHHhhCCccceeeeeccccccCCCHHHHHHHHHHHHhcCccEEEEe
Confidence 2356888898887654321 122234566778898887777888888877 55678889999999999999999998
Q ss_pred cCCCCCCCCCCCCchhHH--hhCCCcEEEeccchhhhhccCcceeeeeccCcchhhHhhhcCCceeecccccchhhhHHH
Q 012083 323 RPGFINGSSTNNPDGLVA--KVADFGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSC 400 (471)
Q Consensus 323 ~~~~~~~~~~~lp~~~~~--~~~~nv~~~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~ 400 (471)
... ....++++.+ ..++|+.++.|.||..+|.||+|++||||||+||++|||++|||||++|++.||+.||+|
T Consensus 312 ~~~-----~~~~~~~~~~~~~~~~n~~v~~~~pq~~~l~~p~~~~fItHGG~gs~~eAl~~GVP~l~~P~~~DQ~~nA~r 386 (461)
T d2acva1 312 SAE-----KKVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFR 386 (461)
T ss_dssp CCC-----GGGSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHH
T ss_pred ecc-----cccCCccchhhhccCCCeEEEecCCHHHHHhcccCCEEEecCCccHHHHHHHcCCCEEeCCcccchHHHHHH
Confidence 764 2234455443 358999999999999999999999999999999999999999999999999999999999
Q ss_pred H-HhhhcceeeecCCC---CCCcCHhHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHhC
Q 012083 401 I-CDDWKIGLWLEPDD---NGIIGRHEIKRKVDELLSN-DVVRKNALKLKELAQKSVTKEGSSSKNLEYFIKQITE 471 (471)
Q Consensus 401 v-~~~~G~G~~~~~~~---~~~~~~~~l~~~i~~ll~~-~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~~ 471 (471)
+ ++ +|+|+.++.+. ...+|.++|.++|+++|+| +.||+||++|++++++++++||||.++++.||++|+.
T Consensus 387 lve~-~G~G~~l~~~~~~~~~~~t~~~l~~a~~~vl~~d~~~r~~a~~l~~~~r~a~~~gg~s~~~~~~~~~~~~~ 461 (461)
T d2acva1 387 LVKE-WGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKDSIVHKKVQEMKEMSRNAVVDGGSSLISVGKLIDDITG 461 (461)
T ss_dssp HHHT-SCCEEESCSSCCTTCCCCCHHHHHHHHHHHTCTTCTHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHHC
T ss_pred HHHH-hCceEEeeccccccCCccCHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHhcC
Confidence 7 56 79999997642 2238999999999999976 5699999999999999999999999999999999984
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Probab=100.00 E-value=7.2e-45 Score=356.80 Aligned_cols=368 Identities=15% Similarity=0.099 Sum_probs=246.2
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCC----CCC
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEP----EDD 93 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~----~~~ 93 (471)
|||+|+++|+.||++|+++||++|++|||+|||++++.+.+.+++. |+.|++++..... ...
T Consensus 1 mrIl~~~~gt~Ghv~P~l~lA~~L~~rGh~V~~~t~~~~~~~v~~~--------------g~~~~~~~~~~~~~~~~~~~ 66 (401)
T d1rrva_ 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAEV--------------GVPHVPVGLPQHMMLQEGMP 66 (401)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH--------------TCCEEECSCCGGGCCCTTSC
T ss_pred CeEEEECCCChhHHHHHHHHHHHHHHCCCEEEEEEChhhHHHHHHC--------------CCeEEEcCCcHHhhhccccc
Confidence 6999999999999999999999999999999999999999999887 8888887642111 112
Q ss_pred cccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcc-hHHHHHHHcCCceEEEeCchHHHHHHHhchhhhh
Q 012083 94 RKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFG-WALQVAAKLELKKASIYTSAPGILAMIMNIPKFI 172 (471)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~-~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~ 172 (471)
..................++.+.+.+.. .++|+++.|.... ++..+|+.+++|++...+.+....
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~i~~~~~~~~~~~~a~~~~~p~~~~~~~~~~~~---------- 132 (401)
T d1rrva_ 67 PPPPEEEQRLAAMTVEMQFDAVPGAAEG----CAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLA---------- 132 (401)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHTTT----CSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSC----------
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEEEcCchhhHHHHHHHHhCCCcccccccchhhc----------
Confidence 2222222222211112222222222233 8999999987554 778899999999998877654310
Q ss_pred hhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhh-----------hccCcEEEEcchhh
Q 012083 173 EAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQN-----------IEASDRILCTWFHE 241 (471)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~l~~s~~~ 241 (471)
..... ... ..+..+........+... ..............+... ........++..+.
T Consensus 133 -~~~~~-----~~~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (401)
T d1rrva_ 133 -SPHLP-----PAY----DEPTTPGVTDIRVLWEER-AARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGERPLLAADPV 201 (401)
T ss_dssp -CSSSC-----CCB----CSCCCTTCCCHHHHHHHH-HHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCSSCEECSCTT
T ss_pred -ccccc-----ccc----ccccccccchhhhhHHHH-HHHHHhhhHHHHHHHHHHhCCcccchhhhhccccchhhcchhh
Confidence 00000 000 000000000000000000 000000011111111111 12222233444444
Q ss_pred hchhhhhhCCCcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccCCHH-HHHHHHHHHHhCCCCEEE
Q 012083 242 LAPSANKILPSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQ-QFNELALGLELAGQPFLC 320 (471)
Q Consensus 242 l~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~-~~~~~~~al~~~~~~~i~ 320 (471)
+.. .+...++.++|++..... .+.+.++..|++... ++||+++||....... ....++.++...+..++|
T Consensus 202 ~~~--~~~~~~~~~~g~~~~~~~-----~~~~~~~~~~l~~~~--~~v~~~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (401)
T d1rrva_ 202 LAP--LQPDVDAVQTGAWLLSDE-----RPLPPELEAFLAAGS--PPVHIGFGSSSGRGIADAAKVAVEAIRAQGRRVIL 272 (401)
T ss_dssp TSC--CCSSCCCEECCCCCCCCC-----CCCCHHHHHHHHSSS--CCEEECCTTCCSHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred hcc--cCCCCCeEEECCCccccc-----ccCCHHHHHhhccCC--CeEEEECCccccCCHHHHHHHHHHHHhhcCCeEEE
Confidence 332 334567889999887643 355667778998864 4999999998665554 455688899999999988
Q ss_pred EEcCCCCCCCCCCCCchhHHhhCCCcEEEeccchhhhhccCcceeeeeccCcchhhHhhhcCCceeecccccchhhhHHH
Q 012083 321 GVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSC 400 (471)
Q Consensus 321 ~~~~~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~ 400 (471)
..+.. ..... ..++|+++.+|+||.++|+|.+ +||||||+||++||+++|||+|++|+..||+.||.+
T Consensus 273 ~~~~~-----~~~~~-----~~~~~v~~~~~~p~~~ll~~~~--~~I~hgG~~t~~Eal~~GvP~l~~P~~~DQ~~na~~ 340 (401)
T d1rrva_ 273 SRGWT-----ELVLP-----DDRDDCFAIDEVNFQALFRRVA--AVIHHGSAGTEHVATRAGVPQLVIPRNTDQPYFAGR 340 (401)
T ss_dssp ECTTT-----TCCCS-----CCCTTEEEESSCCHHHHGGGSS--EEEECCCHHHHHHHHHHTCCEEECCCSBTHHHHHHH
T ss_pred ecccc-----ccccc-----cCCCCEEEEeccCcHHHhhhcc--EEEecCCchHHHHHHHhCCCEEEecccccHHHHHHH
Confidence 77643 11122 2378999999999999997755 499999999999999999999999999999999999
Q ss_pred HHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Q 012083 401 ICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKELAQK 450 (471)
Q Consensus 401 v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~ 450 (471)
+++ +|+|+.++. ..+|+++|.++|+++| |++|+++|++++++++.
T Consensus 341 v~~-~G~g~~l~~---~~~~~~~L~~ai~~vl-~~~~r~~a~~~~~~~~~ 385 (401)
T d1rrva_ 341 VAA-LGIGVAHDG---PTPTFESLSAALTTVL-APETRARAEAVAGMVLT 385 (401)
T ss_dssp HHH-HTSEEECSS---SCCCHHHHHHHHHHHT-SHHHHHHHHHHTTTCCC
T ss_pred HHH-CCCEEEcCc---CCCCHHHHHHHHHHHh-CHHHHHHHHHHHHHHhh
Confidence 999 799999986 6799999999999999 56899999999988753
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=100.00 E-value=1.7e-43 Score=346.52 Aligned_cols=381 Identities=15% Similarity=0.143 Sum_probs=252.7
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCC---CCc
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPE---DDR 94 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~---~~~ 94 (471)
|||+|+++|++||++|+++||++|+++||+|||++++.+.+.+.+. |+.|++++...... ...
T Consensus 1 mkil~~~~gt~Gh~~P~lala~~L~~~Gh~V~~~~~~~~~~~v~~~--------------g~~~~~i~~~~~~~~~~~~~ 66 (401)
T d1iira_ 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAEV--------------GVPHVPVGPSARAPIQRAKP 66 (401)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHT--------------TCCEEECCC-------CCSC
T ss_pred CEEEEECCCChhHHHHHHHHHHHHHHCCCEEEEEeCcchHHHHHHc--------------CCeEEECCcchhhhhhcccc
Confidence 6999999999999999999999999999999999999999999877 89999988654333 111
Q ss_pred ccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcc---hHHHHHHHcCCceEEEeCchHHHHHHHhchhhh
Q 012083 95 KDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFG---WALQVAAKLELKKASIYTSAPGILAMIMNIPKF 171 (471)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~---~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~ 171 (471)
.................++.+.+. . ...|.++.+.... ++..++..+++|++...+......
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~l~~~----~--~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~--------- 131 (401)
T d1iira_ 67 LTAEDVRRFTTEAIATQFDEIPAA----A--EGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVP--------- 131 (401)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHH----T--TTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSC---------
T ss_pred chHHHHHHHHHHHHHHHHHHHHHH----h--hcCcceEEeecchhHHHHHHHHHHhccccccccccccccc---------
Confidence 222222222222222222222222 2 3445555554433 566799999999999876543210
Q ss_pred hhhCCCCCCcccccccccccCCCCCCCCccccCCCC-CCCCCchhHHHHHHHHHH-----------hhhccCcEEEEcch
Q 012083 172 IEAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNC-PGNPSLQTLMFQYINVIR-----------QNIEASDRILCTWF 239 (471)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~l~~s~ 239 (471)
....+ ......+... ........+ .........+........ ......+..++++.
T Consensus 132 --~~~~~--------~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (401)
T d1iira_ 132 --SPYYP--------PPPLGEPSTQ--DTIDIPAQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTDHPWVAAD 199 (401)
T ss_dssp --CSSSC--------CCC-----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSC
T ss_pred --ccccc--------cccccccccc--chhcchhhhhhhhhHHHHHHHHHHHHHHHHhcCccchhhhhhcccchhhhccc
Confidence 00000 0000000000 000000000 000000000000000110 12244667788899
Q ss_pred hhhchhhhhhCCCcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHHHHhCCCCEE
Q 012083 240 HELAPSANKILPSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELAGQPFL 319 (471)
Q Consensus 240 ~~l~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~i 319 (471)
+.++++ .+..+....+|+...... .+.+.+...|+.... ++||+++|+.. .+...+..++++++..+.+++
T Consensus 200 ~~~~~~-~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~--~~i~~~~~~~~-~~~~~~~~~~~al~~~~~~~~ 270 (401)
T d1iira_ 200 PVLAPL-QPTDLDAVQTGAWILPDE-----RPLSPELAAFLDAGP--PPVYLGFGSLG-APADAVRVAIDAIRAHGRRVI 270 (401)
T ss_dssp TTTSCC-CCCSSCCEECCCCCCCCC-----CCCCHHHHHHHHTSS--CCEEEECC----CCHHHHHHHHHHHHHTTCCEE
T ss_pred ccccCC-CCcccccccccCcccCcc-----cccCHHHHHhhccCC--CeEEEccCccc-cchHHHHHHHHHHHHcCCeEE
Confidence 999876 777778888888776543 244455556777654 49999999864 477888999999999999999
Q ss_pred EEEcCCCCCCCCCCCCchhHHhhCCCcEEEeccchhhhhccCcceeeeeccCcchhhHhhhcCCceeecccccchhhhHH
Q 012083 320 CGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKS 399 (471)
Q Consensus 320 ~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~ 399 (471)
|..+.. ...... .++|+++++|+||.++|.|.++ ||||||+||++||+++|||||++|+..||+.||+
T Consensus 271 ~~~~~~-----~~~~~~-----~~~nv~~~~~~p~~~~l~~~~~--~V~hgG~~t~~Eal~~GvP~v~~P~~~DQ~~na~ 338 (401)
T d1iira_ 271 LSRGWA-----DLVLPD-----DGADCFAIGEVNHQVLFGRVAA--VIHHGGAGTTHVAARAGAPQILLPQMADQPYYAG 338 (401)
T ss_dssp ECTTCT-----TCCCSS-----CGGGEEECSSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHH
T ss_pred EeccCC-----cccccc-----CCCCEEEEeccCHHHHHhhcCE--EEecCCchHHHHHHHhCCCEEEccccccHHHHHH
Confidence 987654 111111 3688999999999999987555 9999999999999999999999999999999999
Q ss_pred HHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHh
Q 012083 400 CICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKELAQKSVTKEGSSSKNLEYFIKQIT 470 (471)
Q Consensus 400 ~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~ 470 (471)
++++ +|+|+.++. ..+|+++|.++|+++|+ ++|++||+++++++++. | ..++.+.+++.+.
T Consensus 339 ~l~~-~G~g~~l~~---~~~~~~~l~~ai~~~l~-~~~~~~a~~~~~~~~~~---~--~~~aa~~i~~~i~ 399 (401)
T d1iira_ 339 RVAE-LGVGVAHDG---PIPTFDSLSAALATALT-PETHARATAVAGTIRTD---G--AAVAARLLLDAVS 399 (401)
T ss_dssp HHHH-HTSEEECSS---SSCCHHHHHHHHHHHTS-HHHHHHHHHHHHHSCSC---H--HHHHHHHHHHHHH
T ss_pred HHHH-CCCEEEcCc---CCCCHHHHHHHHHHHhC-HHHHHHHHHHHHHHHhc---C--hHHHHHHHHHHHh
Confidence 9999 799999986 77999999999999995 57999999999998752 2 2345555666553
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=100.00 E-value=4.8e-44 Score=349.69 Aligned_cols=363 Identities=14% Similarity=0.139 Sum_probs=252.3
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCC-----C
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPE-----D 92 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-----~ 92 (471)
|||+|.+.|+.||++|+++||++|+++||+|||++++.+.+.+++. |+.+++++...... .
T Consensus 1 mril~~~~gt~Ghi~P~laLA~~L~~rGh~V~~~~~~~~~~~v~~~--------------g~~~~~~~~~~~~~~~~~~~ 66 (391)
T d1pn3a_ 1 MRVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAEV--------------GVPMVPVGRAVRAGAREPGE 66 (391)
T ss_dssp CEEEEEEESSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH--------------TCCEEECSSCSSGGGSCTTC
T ss_pred CEEEEEcCCChhHHHHHHHHHHHHHHCCCEEEEEEChhhHhHHHHC--------------CCeEEECCccHHHHhhChhh
Confidence 6999999999999999999999999999999999999999999888 89999987554322 1
Q ss_pred CcccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcc---hHHHHHHHcCCceEEEeCchHHHHHHHhchh
Q 012083 93 DRKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFG---WALQVAAKLELKKASIYTSAPGILAMIMNIP 169 (471)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~---~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p 169 (471)
........+. ..++..++.+.+.. .+||+||+|.+.. ++..+|+.+++|++.+.+.+..........+
T Consensus 67 ~~~~~~~~~~-------~~~~~~~~~l~~~~--~~~D~vi~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~~~~~~ 137 (391)
T d1pn3a_ 67 LPPGAAEVVT-------EVVAEWFDKVPAAI--EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSEQSQAE 137 (391)
T ss_dssp CCTTCGGGHH-------HHHHHHHHHHHHHH--TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGGSCHHH
T ss_pred hhHHHHHHHH-------HHHHHHHHHHHHHh--cCCCeEEEcccCchHHHHHHHHHHcCCceEEeeccccccccccccch
Confidence 1111111111 11222222222222 5799999998754 4567899999999998876543111000000
Q ss_pred hhhhhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHH-----------HhhhccCcEEEEcc
Q 012083 170 KFIEAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVI-----------RQNIEASDRILCTW 238 (471)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~l~~s 238 (471)
...... +. ...+...+.+. .......+..++..
T Consensus 138 ~~~~~~---------------------------~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 181 (391)
T d1pn3a_ 138 RDMYNQ---------------------------GA---------DRLFGDAVNSHRASIGLPPVEHLYDYGYTDQPWLAA 181 (391)
T ss_dssp HHHHHH---------------------------HH---------HHHTHHHHHHHHHTTSCCCCCCHHHHHHCSSCEECS
T ss_pred hhHHHH---------------------------HH---------HHHHHHHHHHHHHHhcCcccccccccccccceeecc
Confidence 000000 00 00000000000 00111233445566
Q ss_pred hhhhchhhhhhCCCcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccCCHHH-HHHHHHHHHhCCCC
Q 012083 239 FHELAPSANKILPSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQ-FNELALGLELAGQP 317 (471)
Q Consensus 239 ~~~l~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~-~~~~~~al~~~~~~ 317 (471)
.+.+... .+..++.+++|++..... .+.+.++..|+...+ ++||+++|+........ ...++.++...+.+
T Consensus 182 ~~~~~~~-~~~~~~~~~~g~~~~~~~-----~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 253 (391)
T d1pn3a_ 182 DPVLSPL-RPTDLGTVQTGAWILPDE-----RPLSAELEAFLAAGS--TPVYVGFGSSSRPATADAAKMAIKAVRASGRR 253 (391)
T ss_dssp CTTTSCC-CTTCCSCCBCCCCCCCCC-----CCCCHHHHHHTTSSS--CCEEEECTTCCSTHHHHHHHHHHHHHHHTTCC
T ss_pred chhhhcc-CCCCCCeeeecCcccCcc-----ccCCHHHhhhhccCC--CeEEEeccccccccHHHHHHHHHHHHHhcCCE
Confidence 6666554 566778899999877653 345566667777664 49999999986665544 55688899999999
Q ss_pred EEEEEcCCCCCCCCCCCCchhHHhhCCCcEEEeccchhhhhccCcceeeeeccCcchhhHhhhcCCceeecccccc----
Q 012083 318 FLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQEKVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHD---- 393 (471)
Q Consensus 318 ~i~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~D---- 393 (471)
++|..... ...... .++|+.+.+|+||.++|+|.++ ||||||+||++||+++|+|+|++|+.+|
T Consensus 254 ~~~~~~~~-----~~~~~~-----~~~~v~i~~~~p~~~ll~~a~~--~v~hgG~~t~~Eal~~G~P~v~~P~~~d~~~e 321 (391)
T d1pn3a_ 254 IVLSRGWA-----DLVLPD-----DGADCFVVGEVNLQELFGRVAA--AIHHDSAGTTLLAMRAGIPQIVVRRVVDNVVE 321 (391)
T ss_dssp EEEECTTT-----TCCCSS-----CCTTCCEESSCCHHHHHTTSSC--EEEESCHHHHHHHHHHTCCEEEECSSCCBTTB
T ss_pred EEEecccc-----cccccc-----CCCCEEEecccCHHHHHhhccE--EEecCchHHHHHHHHhCCcEEEeccccCCcch
Confidence 98877543 111222 3788999999999999987766 9999999999999999999999999988
Q ss_pred hhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHH
Q 012083 394 HLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKELAQKSVTKEGSSSKNLEYFIKQI 469 (471)
Q Consensus 394 Q~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~ 469 (471)
|+.||.++++ .|+|+.++. ..+|+++|.++|+++|+ ++||+||+++++.+++ ++..++++.+.+.+
T Consensus 322 Q~~nA~~l~~-~G~g~~l~~---~~~~~~~l~~~i~~~l~-~~~r~~a~~~a~~~~~-----~g~~~aa~~i~~~l 387 (391)
T d1pn3a_ 322 QAYHADRVAE-LGVGVAVDG---PVPTIDSLSAALDTALA-PEIRARATTVADTIRA-----DGTTVAAQLLFDAV 387 (391)
T ss_dssp CCHHHHHHHH-HTSEEEECC---SSCCHHHHHHHHHHHTS-TTHHHHHHHHGGGSCS-----CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-CCCEEEcCc---CCCCHHHHHHHHHHHhC-HHHHHHHHHHHHHHHh-----cCHHHHHHHHHHHH
Confidence 9999999999 799999985 77999999999999995 5799999999988753 33444444444443
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=99.92 E-value=2.4e-24 Score=205.97 Aligned_cols=334 Identities=11% Similarity=0.039 Sum_probs=190.6
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcch--hhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCCcc
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFIC--ERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDDRK 95 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 95 (471)
+||++.+.|+.||++|+++|+++|.++||+|+|+++.... +.+.+. ++.+..++..-... .
T Consensus 1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~---~ 63 (351)
T d1f0ka_ 1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKH--------------GIEIDFIRISGLRG---K 63 (351)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGGG--------------TCEEEECCCCCCTT---C
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeCCcchhhccccc--------------CCcEEEEECCCcCC---C
Confidence 4899998775699999999999999999999999876532 334443 77777665321111 1
Q ss_pred cHHHHHHHHHh--hccHHHHHHHHHHhcccCCCCeeEEEECCC--cchHHHHHHHcCCceEEEeCchHHHHHHHhchhhh
Q 012083 96 DEAKMTRSISK--VMPGYLEELIQKINQQEEDEKITCVIADVT--FGWALQVAAKLELKKASIYTSAPGILAMIMNIPKF 171 (471)
Q Consensus 96 ~~~~~~~~~~~--~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~--~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~ 171 (471)
.....+..... ........++.. .++|+++.... ...+...|..+++|++.+.+..........
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~i~~~-------~~~~~~~~~~~~~~~~~~~~a~~~~ip~~~~~~~~~~~~~~~~----- 131 (351)
T d1f0ka_ 64 GIKALIAAPLRIFNAWRQARAIMKA-------YKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNGIAGLTNKW----- 131 (351)
T ss_dssp CHHHHHTCHHHHHHHHHHHHHHHHH-------HCCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSSSCCHHHHH-----
T ss_pred CHHHHHHHHHHHHHhHHHHHHHhhc-------cccceeeecccchhhhhhhhhhhcccceeecccccccchhHHH-----
Confidence 22211111111 111122334444 79999987643 346677899999999986542211000000
Q ss_pred hhhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhchhhhhhCC
Q 012083 172 IEAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSANKILP 251 (471)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~ 251 (471)
.....+.+..... ....
T Consensus 132 -------------------------------------------------------~~~~~~~~~~~~~--------~~~~ 148 (351)
T d1f0ka_ 132 -------------------------------------------------------LAKIATKVMQAFP--------GAFP 148 (351)
T ss_dssp -------------------------------------------------------HTTTCSEEEESST--------TSSS
T ss_pred -------------------------------------------------------hhhhcceeecccc--------cccc
Confidence 0011112111111 0111
Q ss_pred CcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccCCHHHHHHHHHHHHhCCC-CEEEEEcCCCCCCC
Q 012083 252 SIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNELALGLELAGQ-PFLCGVRPGFINGS 330 (471)
Q Consensus 252 ~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~-~~i~~~~~~~~~~~ 330 (471)
....+|....... ....... ...........+++.+||.+... ....+.+.+..... ...+.....
T Consensus 149 ~~~~~~~~~~~~~-----~~~~~~~-~~~~~~~~~~~i~~~~gs~g~~~--~~~~~~~~~~~l~~~~~~i~~~~~----- 215 (351)
T d1f0ka_ 149 NAEVVGNPVRTDV-----LALPLPQ-QRLAGREGPVRVLVVGGSQGARI--LNQTMPQVAAKLGDSVTIWHQSGK----- 215 (351)
T ss_dssp SCEECCCCCCHHH-----HTSCCHH-HHHTTCCSSEEEEEECTTTCCHH--HHHHHHHHHHHHGGGEEEEEECCT-----
T ss_pred ceeEEcCCccccc-----ccchhHH-hhhhcccCCcccccccccchhhh--hHHHHHHhhhhhcccceeeeeccc-----
Confidence 2222322211100 0000010 11112233457888888864332 22233333433332 223333222
Q ss_pred CCCCC---chhHHhhCCCcEEEeccchh-hhhccCcceeeeeccCcchhhHhhhcCCceeecccc---cchhhhHHHHHh
Q 012083 331 STNNP---DGLVAKVADFGKMVKWAPQE-KVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWG---HDHLYIKSCICD 403 (471)
Q Consensus 331 ~~~lp---~~~~~~~~~nv~~~~~vpq~-~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~---~DQ~~na~~v~~ 403 (471)
.... ....+....|+.+.+|.++. .+|+.+++ +|||||.+|++|++++|+|+|++|+. .||..||.++++
T Consensus 216 -~~~~~~~~~~~~~~~~~~~v~~f~~~~~~lm~~adl--~It~~G~~T~~Eal~~g~P~I~iP~~~~~~~Q~~NA~~l~~ 292 (351)
T d1f0ka_ 216 -GSQQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADV--VVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEK 292 (351)
T ss_dssp -TCHHHHHHHHHHTTCTTSEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHH
T ss_pred -cchhhhhhhhcccccccceeeeehhhHHHHHHhCch--hhccccchHHHHHHHhCCceeeeecccCCchHHHHHHHHHH
Confidence 1111 11122346788889999865 68855555 99999999999999999999999975 489999999999
Q ss_pred hhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHh
Q 012083 404 DWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKELAQKSVTKEGSSSKNLEYFIKQIT 470 (471)
Q Consensus 404 ~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~ 470 (471)
+|+|+.++. ..++.+.|.+++..+.. ++..+|++.+++. . ...+.+.+.+.|.+|.
T Consensus 293 -~G~~~~~~~---~~~~~e~l~~~l~~l~~-----~~~~~~~~~~~~~-~-~~~~a~~i~~~i~~l~ 348 (351)
T d1f0ka_ 293 -AGAAKIIEQ---PQLSVDAVANTLAGWSR-----ETLLTMAERARAA-S-IPDATERVANEVSRVA 348 (351)
T ss_dssp -TTSEEECCG---GGCCHHHHHHHHHTCCH-----HHHHHHHHHHHHT-C-CTTHHHHHHHHHHHHH
T ss_pred -CCCEEEech---hhCCHHHHHHHHHhhCH-----HHHHHHHHHHHcc-C-CccHHHHHHHHHHHHH
Confidence 799999974 77899999999988632 2444555555543 1 2234566666666653
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Probab=99.11 E-value=1.3e-08 Score=95.35 Aligned_cols=147 Identities=14% Similarity=0.100 Sum_probs=89.6
Q ss_pred CcEEEEecCccccCCHHHHHHHHHHHHhCCC-----CEEEEEcCCCCCCCCCCCCchhHHh--hCCCcEEEeccchh-hh
Q 012083 286 GSVIYAAFGSISKLSQQQFNELALGLELAGQ-----PFLCGVRPGFINGSSTNNPDGLVAK--VADFGKMVKWAPQE-KV 357 (471)
Q Consensus 286 ~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~-----~~i~~~~~~~~~~~~~~lp~~~~~~--~~~nv~~~~~vpq~-~l 357 (471)
+..+++..|+... ...+..++++++.+.. .+++..++. ....+ ....++ ..+++.+.++..+. .+
T Consensus 194 ~~~~i~~~gr~~~--~Kg~~~li~a~~~l~~~~~~~~~~ii~g~~----~~~~~-~~~~~~~~~~~~v~~~g~~~~~~~~ 266 (370)
T d2iw1a1 194 QQNLLLQVGSDFG--RKGVDRSIEALASLPESLRHNTLLFVVGQD----KPRKF-EALAEKLGVRSNVHFFSGRNDVSEL 266 (370)
T ss_dssp TCEEEEEECSCTT--TTTHHHHHHHHHTSCHHHHHTEEEEEESSS----CCHHH-HHHHHHHTCGGGEEEESCCSCHHHH
T ss_pred cceEEEEEecccc--ccchhhhcccccccccccccceeeeccccc----ccccc-ccccccccccccccccccccccccc
Confidence 3477777787533 2235566666655432 333334322 10001 112222 24567777766543 68
Q ss_pred hccCcceeeee--c--cCcchhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhC
Q 012083 358 LAHPSVACYLT--H--CGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLS 433 (471)
Q Consensus 358 L~~~~~~~~It--H--gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~ 433 (471)
++.+++ +|. + |-.+++.||+++|+|+|+.. .......+.+ -+.|..+. ..-+.+++.++|.++++
T Consensus 267 ~~~adv--~v~ps~~E~~~~~~~EAma~G~PvI~s~----~~g~~e~i~~-~~~G~l~~----~~~d~~~la~~i~~ll~ 335 (370)
T d2iw1a1 267 MAAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTA----VCGYAHYIAD-ANCGTVIA----EPFSQEQLNEVLRKALT 335 (370)
T ss_dssp HHHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEET----TSTTTHHHHH-HTCEEEEC----SSCCHHHHHHHHHHHHH
T ss_pred cccccc--cccccccccccceeeecccCCeeEEEeC----CCChHHHhcC-CCceEEEc----CCCCHHHHHHHHHHHHc
Confidence 877887 553 3 44578999999999999864 3445556667 37787663 33478999999999999
Q ss_pred cHHHHHHHHHHHHHHHH
Q 012083 434 NDVVRKNALKLKELAQK 450 (471)
Q Consensus 434 ~~~~~~~a~~l~~~~~~ 450 (471)
|++.+++..+-+++..+
T Consensus 336 d~~~~~~~~~~ar~~~~ 352 (370)
T d2iw1a1 336 QSPLRMAWAENARHYAD 352 (370)
T ss_dssp CHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHH
Confidence 98766655554444433
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.03 E-value=8.7e-08 Score=92.21 Aligned_cols=91 Identities=12% Similarity=0.140 Sum_probs=60.5
Q ss_pred CCCcEEEeccchh---hhhccCcceeeeec----cCcchhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeecCCC
Q 012083 343 ADFGKMVKWAPQE---KVLAHPSVACYLTH----CGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDD 415 (471)
Q Consensus 343 ~~nv~~~~~vpq~---~lL~~~~~~~~ItH----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~ 415 (471)
+.++.+.+++|+. .+++.+++ ++.. |..+++.||+++|+|+|+.... .....+.. +.|..++.
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~~adi--~v~~s~~e~~~~~~~Eama~G~Pvi~~~~g----~~~e~i~~--~~G~~~~~-- 377 (437)
T d2bisa1 308 GNVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAVG----GLRDIITN--ETGILVKA-- 377 (437)
T ss_dssp TTEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHTTTCEEEEESCT----THHHHCCT--TTCEEECT--
T ss_pred ccceeccccCcHHHHHHHHhhhcc--ccccccccccchHHHHHHHCCCCEEEeCCC----CcHHhEEC--CcEEEECC--
Confidence 4445556888864 56666666 5543 4456999999999999986543 23333333 67887753
Q ss_pred CCCcCHhHHHHHHHHHhC-cH----HHHHHHHHHHH
Q 012083 416 NGIIGRHEIKRKVDELLS-ND----VVRKNALKLKE 446 (471)
Q Consensus 416 ~~~~~~~~l~~~i~~ll~-~~----~~~~~a~~l~~ 446 (471)
-+.++++++|.++|+ |+ .+++++++.++
T Consensus 378 ---~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~ 410 (437)
T d2bisa1 378 ---GDPGELANAILKALELSRSDLSKFRENCKKRAM 410 (437)
T ss_dssp ---TCHHHHHHHHHHHHTTTTSCTHHHHHHHHHHHH
T ss_pred ---CCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 478999999999986 44 35555555443
|
| >d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Bacillus subtilis [TaxId: 1423]
Probab=98.98 E-value=1.4e-08 Score=95.98 Aligned_cols=351 Identities=13% Similarity=0.020 Sum_probs=187.4
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhC-CCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEE-EeCCCCCCCCCC
Q 012083 16 TNVHVLLVSFPAQGHVASLMKLAHRLADC-RIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRI-VPLPDGLEPEDD 93 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~~~La~~L~~r-Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~ 93 (471)
+||||+++. |++..+.-+.+|.++|.++ +.++.++.+....+......... ++.. ..+ .+. ..
T Consensus 1 ~k~Ki~~v~-GtR~e~~kl~pli~~l~~~~~~~~~li~tG~H~~~~~~~~~~~----------~i~~~~~~--~~~--~~ 65 (377)
T d1o6ca_ 1 KKLKVMTVF-GTRPEAIKMAPLVLELKKYPEIDSYVTVTAQHRQMLDQVLDAF----------HIKPDFDL--NIM--KE 65 (377)
T ss_dssp CCEEEEEEE-CSHHHHHHHHHHHHHGGGCTTEEEEEEECCSCGGGTHHHHHHT----------TCCCSEEC--CCC--CT
T ss_pred CCceEEEEE-EchHhHHHHHHHHHHHHhCCCCCEEEEEeCCCHHHHHHHHhhc----------CCCCceee--ecC--CC
Confidence 578999888 9999999999999999986 67888888776533222221110 2210 011 111 11
Q ss_pred cccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEE--CCCcc-hHHHHHHHcCCceEEEeCchHHHHHHHhchhh
Q 012083 94 RKDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIA--DVTFG-WALQVAAKLELKKASIYTSAPGILAMIMNIPK 170 (471)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~--D~~~~-~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~ 170 (471)
........ ..+...+.+++.+ .+||+||+ |-... +++.+|..++||.+-+..+--+.
T Consensus 66 ~~~~~~~~----~~~i~~~~~~~~~-------~kpD~v~v~GDr~e~la~a~aa~~~~Ipi~HiegG~~s~--------- 125 (377)
T d1o6ca_ 66 RQTLAEIT----SNALVRLDELFKD-------IKPDIVLVHGDTTTTFAGSLAAFYHQIAVGHVEAGLRTG--------- 125 (377)
T ss_dssp TCCHHHHH----HHHHHHHHHHHHH-------HCCSEEEEETTCHHHHHHHHHHHHTTCEEEEESCCCCCS---------
T ss_pred CCCHHHHH----HHHHHhhhhhhhh-------cccceeEeeecccccchhhhhhhhccceEEEEecccccc---------
Confidence 12232222 2223335555655 79998764 43433 67889999999999865321110
Q ss_pred hhhhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhchhhhhh-
Q 012083 171 FIEAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSANKI- 249 (471)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~- 249 (471)
+ ...+ .+ +...+.... ..++..++.+....+.-....
T Consensus 126 ----------------~---~~~~--------~~---------de~~R~~is------kls~~hf~~t~~~~~~L~~~G~ 163 (377)
T d1o6ca_ 126 ----------------N---KYSP--------FP---------EELNRQMTG------AIADLHFAPTGQAKDNLLKENK 163 (377)
T ss_dssp ----------------C---TTTT--------TT---------HHHHHHHHH------HHCSEEEESSHHHHHHHHHTTC
T ss_pred ----------------c---cccc--------Cc---------hhhhccccc------cceeEEeecchhhhhhhhhhcc
Confidence 0 0000 01 222222222 256677777765544321111
Q ss_pred -CCCcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccCC---HHHHHHHHHHHHhCCCCEEEEEcCC
Q 012083 250 -LPSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLS---QQQFNELALGLELAGQPFLCGVRPG 325 (471)
Q Consensus 250 -~~~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~---~~~~~~~~~al~~~~~~~i~~~~~~ 325 (471)
..+++.||-...+.-.......... ..+.....++.+++++-...... ...+..+...+..... +.+.....
T Consensus 164 ~~~~I~~vG~~~~D~i~~~~~~~~~~---~~~~~~~~~~~ilvt~Hr~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~ 239 (377)
T d1o6ca_ 164 KADSIFVTGNTAIDALNTTVRDGYSH---PVLDQVGEDKMILLTAHRRENLGEPMENMFKAIRRIVGEFED-VQVVYPVH 239 (377)
T ss_dssp CGGGEEECCCHHHHHHHHHCCSSCCC---STTTTTTTSEEEEECC----------HHHHHHHHHHHHHCTT-EEEEEC--
T ss_pred ccceEeeccchhHHHHHHHHHHHHhh---hhhhhccCCceEEEEeccccccccchHHHHHHHHhhcccccc-cccccccc
Confidence 3367777755443100000000011 11222233457788776443322 2234445555555443 22222211
Q ss_pred CCCCCCCCCCchhHH--hhCCCcEEEeccchh---hhhccCcceeeeeccCcchhhHhhhcCCceeecccccchhhhHHH
Q 012083 326 FINGSSTNNPDGLVA--KVADFGKMVKWAPQE---KVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSC 400 (471)
Q Consensus 326 ~~~~~~~~lp~~~~~--~~~~nv~~~~~vpq~---~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~ 400 (471)
.....-....+ ...+|+++++.+++. .+|+++++ +|+.+|.+ ..||-..|+|+|.+--..|+.. +
T Consensus 240 ----~~~~~~~~~~~~~~~~~ni~~~~~l~~~~fl~llk~s~~--vIgnSss~-i~Ea~~lg~P~Inir~~tERqe-~-- 309 (377)
T d1o6ca_ 240 ----LNPVVREAAHKHFGDSDRVHLIEPLEVIDFHNFAAKSHF--ILTDSGGV-QEEAPSLGKPVLVLRDTTERPE-G-- 309 (377)
T ss_dssp ------CHHHHHHHHC--CCSSEEECCCCCHHHHHHHHHHCSE--EEEC--CH-HHHGGGGTCCEEEECSCCC----C--
T ss_pred ----cccccchhhhhccccccceEeccccchHHHHHHHhhhhe--eecccchh-HHhhhhhhceEEEeCCCCcCcc-h--
Confidence 00000001111 125788888888865 57888887 99999988 6699999999999976555542 1
Q ss_pred HHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHH
Q 012083 401 ICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKELAQKSVTKEGSSSKNLEYFIKQI 469 (471)
Q Consensus 401 v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~ 469 (471)
.+ .|.-+.++ .+.++|.+++..++.++...++......-. .+|++|.+.++.+++.+
T Consensus 310 -~~-~g~nilv~------~~~~~I~~~i~~~l~~~~~~~~~~~~~npY----GdG~as~rI~~~L~~~~ 366 (377)
T d1o6ca_ 310 -VE-AGTLKLAG------TDEENIYQLAKQLLTDPDEYKKMSQASNPY----GDGEASRRIVEELLFHY 366 (377)
T ss_dssp -TT-TTSSEEEC------SCHHHHHHHHHHHHHCHHHHHHHHHCCCTT----CCSCHHHHHHHHHHHHT
T ss_pred -hh-cCeeEECC------CCHHHHHHHHHHHHhChHHHhhhccCCCCC----CCChHHHHHHHHHHHhh
Confidence 12 25444443 378999999999999988777766554433 33677777777776543
|
| >d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Thermus thermophilus [TaxId: 274]
Probab=98.82 E-value=4.3e-07 Score=85.33 Aligned_cols=344 Identities=10% Similarity=-0.033 Sum_probs=186.0
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHh-CCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCCccc
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLAD-CRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDDRKD 96 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~-rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 96 (471)
+||+++. +++..+.-+.+|.++|.+ .+.++.++.+....+...+... .. +++-.. .+........
T Consensus 3 kkI~~v~-GtR~e~~kl~pli~~l~~~~~~~~~li~tG~H~~~~~~~~~-~~---------~i~~d~---~l~~~~~~~s 68 (373)
T d1v4va_ 3 KRVVLAF-GTRPEATKMAPVYLALRGIPGLKPLVLLTGQHREQLRQALS-LF---------GIQEDR---NLDVMQERQA 68 (373)
T ss_dssp EEEEEEE-CSHHHHHHHHHHHHHHHTSTTEEEEEEECSSCHHHHHHHHH-TT---------TCCCSE---ECCCCSSCCC
T ss_pred CeEEEEE-EhhHHHHHHHHHHHHHHhCCCCCEEEEEccCChhhhhCcch-hc---------CCCccc---cCCCCCCCCC
Confidence 6887776 999999999999999987 4899998888766554332211 11 332100 0111111223
Q ss_pred HHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEE--CCCcc-hHHHHHHHcCCceEEEeCchHHHHHHHhchhhhhh
Q 012083 97 EAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIA--DVTFG-WALQVAAKLELKKASIYTSAPGILAMIMNIPKFIE 173 (471)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~--D~~~~-~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~ 173 (471)
+.+.. ..+...+.+++.+ .+||+|++ |-... +++.+|..++||.+-+..+.-+
T Consensus 69 ~~~~~----~~~~~~~~~~l~~-------~kPD~vlv~GDr~e~la~a~aa~~~~ipi~HiegG~rs------------- 124 (373)
T d1v4va_ 69 LPDLA----ARILPQAARALKE-------MGADYVLVHGDTLTTFAVAWAAFLEGIPVGHVEAGLRS------------- 124 (373)
T ss_dssp HHHHH----HHHHHHHHHHHHH-------TTCSEEEEESSCHHHHHHHHHHHHTTCCEEEETCCCCC-------------
T ss_pred HHHHH----HHHHHHHhhhhhh-------cCcccccccccCccchhHHHHHHHhhhhheeecccccc-------------
Confidence 32222 2233345666666 89998874 54444 6678899999999996532110
Q ss_pred hCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhchhhhhh---C
Q 012083 174 AGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSANKI---L 250 (471)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~---~ 250 (471)
... .....+...+.... .-++..++.+...-+.- ... .
T Consensus 125 ------------------------g~~--------~~~~~de~~R~~is------kls~~hf~~t~~~~~~L-~~~Ge~~ 165 (373)
T d1v4va_ 125 ------------------------GNL--------KEPFPEEANRRLTD------VLTDLDFAPTPLAKANL-LKEGKRE 165 (373)
T ss_dssp ------------------------SCT--------TSSTTHHHHHHHHH------HHCSEEEESSHHHHHHH-HTTTCCG
T ss_pred ------------------------ccc--------ccCcchhhhhhhhc------cccceeeecchhhhhhh-hhhcccc
Confidence 000 00000222222221 24566666665544332 111 2
Q ss_pred CCcceeccccCCCCCCCCCCcCcchhcccccCCCCCcEEEEecCccccC-CHHHHHHHHHHHHhCCCCEEEEEcCCCCCC
Q 012083 251 PSIIPVGPLIANGQPTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKL-SQQQFNELALGLELAGQPFLCGVRPGFING 329 (471)
Q Consensus 251 ~~~~~vGp~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~-~~~~~~~~~~al~~~~~~~i~~~~~~~~~~ 329 (471)
.++..||-...+.- .....+.........++.+++++-..... ....+..++..+......+.+.....
T Consensus 166 ~~I~~vG~p~~D~i------~~~~~~~~~~~~~~~~~~~lvt~hr~~n~~~~~~~~~~~~~~~~~~~~~~~i~p~~---- 235 (373)
T d1v4va_ 166 EGILVTGQTGVDAV------LLAAKLGRLPEGLPEGPYVTVTMHRRENWPLLSDLAQALKRVAEAFPHLTFVYPVH---- 235 (373)
T ss_dssp GGEEECCCHHHHHH------HHHHHHCCCCTTCCSSCEEEECCCCGGGGGGHHHHHHHHHHHHHHCTTSEEEEECC----
T ss_pred cceeecccchhhHH------HhhhhhcccccccccccceeEEeccccccchHHHHHHHHHHHhhhcccceeeeeec----
Confidence 36677774433211 00001111112223355888888765332 23445555555544443333333221
Q ss_pred CCCCCCchhHH--hhCCCcEEEeccchh---hhhccCcceeeeeccCcchhhHhhhcCCceeecccccchhhhHHHHHhh
Q 012083 330 SSTNNPDGLVA--KVADFGKMVKWAPQE---KVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDD 404 (471)
Q Consensus 330 ~~~~lp~~~~~--~~~~nv~~~~~vpq~---~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~ 404 (471)
..........+ +...|+.++..+++. .+|+++.+ +|+.+|.+ ..||-++|+|+|.+....+...- . +
T Consensus 236 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~l~ll~~s~~--vignSssg-i~Ea~~lg~P~Inir~~~eRqeg-~---~- 307 (373)
T d1v4va_ 236 LNPVVREAVFPVLKGVRNFVLLDPLEYGSMAALMRASLL--LVTDSGGL-QEEGAALGVPVVVLRNVTERPEG-L---K- 307 (373)
T ss_dssp SCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTEEE--EEESCHHH-HHHHHHTTCCEEECSSSCSCHHH-H---H-
T ss_pred ccccchhhhhhhhcccccceeeccchHHHHHHHhhhcee--Eecccchh-hhcchhhcCcEEEeCCCccCHHH-H---h-
Confidence 00000001111 224788888777765 56866666 99998765 45999999999999775554432 1 2
Q ss_pred hcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHH
Q 012083 405 WKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKELAQKSVTKEGSSSKNLEYFI 466 (471)
Q Consensus 405 ~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~ 466 (471)
.|.-+.+. .+.++|.+++..++++++++++......-. .+|.++.+.++.+.
T Consensus 308 ~g~nvlv~------~d~~~I~~~i~~~l~~~~~~~~~~~~~npY----GdG~as~rI~~~L~ 359 (373)
T d1v4va_ 308 AGILKLAG------TDPEGVYRVVKGLLENPEELSRMRKAKNPY----GDGKAGLMVARGVA 359 (373)
T ss_dssp HTSEEECC------SCHHHHHHHHHHHHTCHHHHHHHHHSCCSS----CCSCHHHHHHHHHH
T ss_pred cCeeEEcC------CCHHHHHHHHHHHHcCHHHHhhcccCCCCC----CCCHHHHHHHHHHH
Confidence 25444433 478999999999999998887766543333 22455544444443
|
| >d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Escherichia coli [TaxId: 562]
Probab=98.69 E-value=1.7e-06 Score=81.12 Aligned_cols=345 Identities=12% Similarity=0.025 Sum_probs=185.6
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhC-CCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEE-EeCCCCCCCCCCcc
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADC-RIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRI-VPLPDGLEPEDDRK 95 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~r-Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~~ 95 (471)
|||+++. |++..+.-+.+|.++|.+. +.++.++.+....+......... ++.. +.+ .-.....
T Consensus 1 MKi~~v~-GtR~e~~kl~pli~~l~~~~~~~~~li~tG~H~~~~~~~~~~~----------~~~~~~~~----~~~~~~~ 65 (376)
T d1f6da_ 1 MKVLTVF-GTRPEAIKMAPLVHALAKDPFFEAKVCVTAQHREMLDQVLKLF----------SIVPDYDL----NIMQPGQ 65 (376)
T ss_dssp CEEEEEE-CSHHHHHHHHHHHHHHHHCTTCEEEEEECCTTGGGGHHHHHHT----------TCCCSEEC----CCCSSSS
T ss_pred CeEEEEE-EhhHhHHHHHHHHHHHHhCCCCCEEEEEcCCCHHHHHHHHHhc----------CCCCCccc----ccCCCCC
Confidence 5988888 9999999999999999886 68999998876544322211100 2210 011 1111122
Q ss_pred cHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEE--CCCcc-hHHHHHHHcCCceEEEeCchHHHHHHHhchhhhh
Q 012083 96 DEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIA--DVTFG-WALQVAAKLELKKASIYTSAPGILAMIMNIPKFI 172 (471)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~--D~~~~-~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~ 172 (471)
....... .+-..+.+.+.+ .+||+||+ |-... +++.+|..++||++-+..+--+.
T Consensus 66 ~~~~~~~----~~i~~~~~~~~~-------~kPD~v~v~GDr~e~la~a~aa~~~~ipi~HiegG~~s~----------- 123 (376)
T d1f6da_ 66 GLTEITC----RILEGLKPILAE-------FKPDVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGLRTG----------- 123 (376)
T ss_dssp CHHHHHH----HHHHHHHHHHHH-------HCCSEEEEETTCHHHHHHHHHHHTTTCCEEEESCCCCCS-----------
T ss_pred CHHHHHH----HHHHhhHHHHHh-------ccCcceeeeccccchhhHHHHHHhhCceEEEEecccccc-----------
Confidence 2322222 222334555555 78998764 44433 77788999999999975321100
Q ss_pred hhCCCCCCcccccccccccCCCCCCCCccccCCCCCCCCCchhHHHHHHHHHHhhhccCcEEEEcchhhhchhhhhh---
Q 012083 173 EAGIISSDGIVIKNEKIELSPYLPAASPAEFLWNCPGNPSLQTLMFQYINVIRQNIEASDRILCTWFHELAPSANKI--- 249 (471)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~--- 249 (471)
....+ .+ +...+.... .-++..++.+...-+.- ...
T Consensus 124 -----------------~~~~~--------~p---------de~~R~~is------kls~~hf~~~~~~~~~L-~~~G~~ 162 (376)
T d1f6da_ 124 -----------------DLYSP--------WP---------EEANRTLTG------HLAMYHFSPTETSRQNL-LRENVA 162 (376)
T ss_dssp -----------------CTTSS--------TT---------HHHHHHHHH------HTCSEEEESSHHHHHHH-HHTTCC
T ss_pred -----------------ccccc--------Cc---------hhhhhhhhc------cceeEEEeccHHHHhHH-HhcCCC
Confidence 00000 11 222222222 35677777776544332 111
Q ss_pred CCCcceeccccCCCC------CCCCCCcCcchhcccccCCCCCcEEEEecCccccCCHHHHHHH---HHHHHhCCCCEEE
Q 012083 250 LPSIIPVGPLIANGQ------PTGNFWSEDLTCLSWLDKQPPGSVIYAAFGSISKLSQQQFNEL---ALGLELAGQPFLC 320 (471)
Q Consensus 250 ~~~~~~vGp~~~~~~------~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~---~~al~~~~~~~i~ 320 (471)
+.+++.||....+.- ......-....+.........++.|++++=....... .+..+ +..+......+.+
T Consensus 163 ~~~I~~vG~~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ilvt~H~~~~~~~-~~~~i~~~l~~~~~~~~~~~i 241 (376)
T d1f6da_ 163 DSRIFITGNTVIDALLWVRDQVMSSDKLRSELAANYPFIDPDKKMILVTGHRRESFGR-GFEEICHALADIATTHQDIQI 241 (376)
T ss_dssp GGGEEECCCHHHHHHHHHHHHTTTCHHHHHHHHTTCTTCCTTSEEEEECCCCBSSCCH-HHHHHHHHHHHHHHHCTTEEE
T ss_pred ccccceecCchHHHHHHHHhhhhccchhhhhhhccccccCCCCceEEEecccchhhhh-hHHHHHHHHhhhhhhcceeEE
Confidence 346788886554310 0000000011111111112345688888765444433 33333 4444444444444
Q ss_pred EEcCCCCCCCCCCCCchhHH--hhCCCcEEEeccchh---hhhccCcceeeeeccCcchhhHhhhcCCceeecccccchh
Q 012083 321 GVRPGFINGSSTNNPDGLVA--KVADFGKMVKWAPQE---KVLAHPSVACYLTHCGWNSTMEGISMGVPFLCWPWGHDHL 395 (471)
Q Consensus 321 ~~~~~~~~~~~~~lp~~~~~--~~~~nv~~~~~vpq~---~lL~~~~~~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~ 395 (471)
...... ....-....+ ...+|+.+++-+++. .+|+++.+ +|+..|.+ .-||-+.|+|+|.+-...+|+
T Consensus 242 i~p~~~----~~~~~~~~~~~~~~~~ni~~~~~l~~~~fl~ll~~a~~--vignSssg-i~Ea~~lg~P~Inir~~ter~ 314 (376)
T d1f6da_ 242 VYPVHL----NPNVREPVNRILGHVKNVILIDPQEYLPFVWLMNHAWL--ILTDSGGI-QEEAPSLGKPVLVMRDTTERP 314 (376)
T ss_dssp EEECCB----CHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHCSE--EEESSSGG-GGTGGGGTCCEEECSSCCSCH
T ss_pred eccccc----chhhhhhHhhhhcccccceeeccccHHHHHHHHhhceE--EEecCcch-HhhHHHhCCCEEEcCCCccCc
Confidence 443220 0000000111 125788888666654 58888888 99997754 569999999999886555666
Q ss_pred hhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHhhcCCChHHHHH
Q 012083 396 YIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSNDVVRKNALKLKELAQKSVTKEGSSSKNLE 463 (471)
Q Consensus 396 ~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~ 463 (471)
. ++.. |--+.+. .+.++|.+++.++++++..+++..+...-.. +|.++.+.++
T Consensus 315 ~---~~~~--g~~i~v~------~~~~~I~~ai~~~l~~~~~~~~~~~~~npYG----dG~as~rI~~ 367 (376)
T d1f6da_ 315 E---AVTA--GTVRLVG------TDKQRIVEEVTRLLKDENEYQAMSRAHNPYG----DGQACSRILE 367 (376)
T ss_dssp H---HHHH--TSEEECC------SSHHHHHHHHHHHHHCHHHHHHHHHSCCTTC----CSCHHHHHHH
T ss_pred c---ceec--CeeEECC------CCHHHHHHHHHHHHhChHhhhhhccCCCCCC----CChHHHHHHH
Confidence 2 3322 4333332 4789999999999998877666555433332 2455444443
|
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=98.57 E-value=2.7e-06 Score=82.78 Aligned_cols=140 Identities=8% Similarity=0.027 Sum_probs=81.1
Q ss_pred CcEEEEecCcccc-CCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCCc---hhHHhhCCCcEEEeccchh---hhh
Q 012083 286 GSVIYAAFGSISK-LSQQQFNELALGLELAGQPFLCGVRPGFINGSSTNNPD---GLVAKVADFGKMVKWAPQE---KVL 358 (471)
Q Consensus 286 ~~vv~vs~GS~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~---~~~~~~~~nv~~~~~vpq~---~lL 358 (471)
+..+++..|.... ...+.+...+..+.+.+.++++...+. ..... ....+.++++.+..+.+.. .++
T Consensus 290 ~~~~i~~vgrl~~~KG~~~Ll~a~~~~~~~~~~l~~~G~G~------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 363 (477)
T d1rzua_ 290 GSPLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGD------VALEGALLAAASRHHGRVGVAIGYNEPLSHLMQ 363 (477)
T ss_dssp SSCEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEEECBC------HHHHHHHHHHHHHTTTTEEEEESCCHHHHHHHH
T ss_pred CccEEEEEeeeeecCCcHHHHHHHHHHHhhCCeEEEEecCC------chHHHHHHHHHhhcCCeEEEEcccChhHHHHHH
Confidence 3456677887643 334444443333344567777655432 00001 1222357888888776653 355
Q ss_pred ccCcceeeeecc---Ccc-hhhHhhhcCCceeeccccc--c---hhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHH
Q 012083 359 AHPSVACYLTHC---GWN-STMEGISMGVPFLCWPWGH--D---HLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVD 429 (471)
Q Consensus 359 ~~~~~~~~ItHg---G~~-s~~eal~~GvP~l~~P~~~--D---Q~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~ 429 (471)
+.+++ ||... |.| +++||+++|+|+|+.-..+ | ...+...+.. -+.|..+++ -+.++|.++|+
T Consensus 364 ~~aD~--~v~PS~~E~fglv~lEAma~G~PvVas~~GG~~E~v~d~~~~~~~~~-~~~G~l~~~-----~d~~~la~ai~ 435 (477)
T d1rzua_ 364 AGCDA--IIIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASK-AATGVQFSP-----VTLDGLKQAIR 435 (477)
T ss_dssp HHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTT-CCCBEEESS-----CSHHHHHHHHH
T ss_pred HhCcc--ccCCccccCCCHHHHHHHHcCCCEEEcCCCCCcceeecCCccccccC-CCceEEeCC-----CCHHHHHHHHH
Confidence 44555 88776 334 7889999999999864321 1 1222333333 257888854 57899999999
Q ss_pred HHhC---cHHHHH
Q 012083 430 ELLS---NDVVRK 439 (471)
Q Consensus 430 ~ll~---~~~~~~ 439 (471)
++++ |++.++
T Consensus 436 ~~l~~~~~~~~~~ 448 (477)
T d1rzua_ 436 RTVRYYHDPKLWT 448 (477)
T ss_dssp HHHHHHTCHHHHH
T ss_pred HHHhhhCCHHHHH
Confidence 8875 554333
|
| >d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: First mannosyl transferase WbaZ species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.92 E-value=1.3e-05 Score=65.67 Aligned_cols=142 Identities=12% Similarity=0.072 Sum_probs=84.2
Q ss_pred EEecCccccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCCchhHHhhCCCcEEEeccchh---hhhccCcceee
Q 012083 290 YAAFGSISKLSQQQFNELALGLELAGQPFLCGVRPGFINGSSTNNPDGLVAKVADFGKMVKWAPQE---KVLAHPSVACY 366 (471)
Q Consensus 290 ~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~lp~~~~~~~~~nv~~~~~vpq~---~lL~~~~~~~~ 366 (471)
|+..|.+. +...+..++++++.+...-++.++..........+-..+.+...+|+++.+|+|.. .++..+++-++
T Consensus 15 ~l~iGrl~--~~K~~~~~i~a~~~l~~~~l~ivg~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~i~ 92 (166)
T d2f9fa1 15 WLSVNRIY--PEKRIELQLEVFKKLQDEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSRCKGLLC 92 (166)
T ss_dssp EEEECCSS--GGGTHHHHHHHHHHCTTSCEEEEBCCCTTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHHCSEEEE
T ss_pred EEEEecCc--cccCHHHHHHHHHHhcCCeEEEEEecccccchhhhhhhhcccccCcEEEeeccccccccccccccccccc
Confidence 44567642 22335566677766654334445432000000001112222346899999999974 57777777333
Q ss_pred eecc--CcchhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeecCCCCCCcCHhHHHHHHHHHhCcH-HHHHHHHH
Q 012083 367 LTHC--GWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDDNGIIGRHEIKRKVDELLSND-VVRKNALK 443 (471)
Q Consensus 367 ItHg--G~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~-~~~~~a~~ 443 (471)
-+.. ..+++.||+++|+|+|+.+... ....+.. -..|...+. +.+++.++|.++++|+ .+++++.+
T Consensus 93 ps~~e~~~~~~~Ea~~~g~pvi~s~~~~----~~e~i~~-~~~g~~~~~------d~~~~~~~i~~l~~~~~~~~~~~~~ 161 (166)
T d2f9fa1 93 TAKDEDFGLTPIEAMASGKPVIAVNEGG----FKETVIN-EKTGYLVNA------DVNEIIDAMKKVSKNPDKFKKDCFR 161 (166)
T ss_dssp CCSSCCSCHHHHHHHHTTCCEEEESSHH----HHHHCCB-TTTEEEECS------CHHHHHHHHHHHHHCTTTTHHHHHH
T ss_pred ccccccccccccccccccccceeecCCc----ceeeecC-CcccccCCC------CHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 3322 3458999999999999986543 2233444 256765532 6799999999999996 46665544
Q ss_pred H
Q 012083 444 L 444 (471)
Q Consensus 444 l 444 (471)
-
T Consensus 162 ~ 162 (166)
T d2f9fa1 162 R 162 (166)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >d1pswa_ c.87.1.7 (A:) ADP-heptose LPS heptosyltransferase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: ADP-heptose LPS heptosyltransferase II domain: ADP-heptose LPS heptosyltransferase II species: Escherichia coli [TaxId: 562]
Probab=97.48 E-value=0.0073 Score=54.83 Aligned_cols=105 Identities=10% Similarity=0.096 Sum_probs=72.9
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhC--CCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeE-EEeCCCCCCCCCCc
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADC--RIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVR-IVPLPDGLEPEDDR 94 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~r--Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~ 94 (471)
||||++-..+-|++.-+.++.++|+++ +.+|++++.+.+.+.++.. +.+. +..++.. ...
T Consensus 1 MkILii~~~~iGD~il~~p~i~~Lk~~~P~~~I~~l~~~~~~~l~~~~-------------p~id~v~~~~~~----~~~ 63 (348)
T d1pswa_ 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSRM-------------PEVNEAIPMPLG----HGA 63 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTTC-------------TTEEEEEEC----------
T ss_pred CeEEEEcCCChHHHHHHHHHHHHHHHHCCCCEEEEEEChhHHHHHhhC-------------CCcCEEEEecCc----ccc
Confidence 699999999999999999999999986 8999999998888766543 2443 3333211 000
Q ss_pred ccHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcchHHHHHHHcCCceEEEe
Q 012083 95 KDEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFGWALQVAAKLELKKASIY 155 (471)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~~~~~~A~~lgiP~v~~~ 155 (471)
.. .....+++..++. .++|+++.-........++...+++....+
T Consensus 64 ~~------------~~~~~~l~~~l~~----~~~D~~i~~~~~~~~~~~~~~~~~~~~~~~ 108 (348)
T d1pswa_ 64 LE------------IGERRKLGHSLRE----KRYDRAYVLPNSFKSALVPLFAGIPHRTGW 108 (348)
T ss_dssp -C------------HHHHHHHHHHTTT----TTCSEEEECSCCSGGGHHHHHTTCSEEEEE
T ss_pred ch------------hhhhhhHHHHhhh----cccceEeecccccchhhHHHhhcccccccc
Confidence 01 1112345555655 899999976655566778888898887653
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=96.65 E-value=0.0029 Score=52.48 Aligned_cols=80 Identities=9% Similarity=0.076 Sum_probs=54.7
Q ss_pred CCCcEEEeccchh---hhhccCcceeeee----ccCcchhhHhhhcCCceeecccccchhhhHHHHHhhhcceeeecCCC
Q 012083 343 ADFGKMVKWAPQE---KVLAHPSVACYLT----HCGWNSTMEGISMGVPFLCWPWGHDHLYIKSCICDDWKIGLWLEPDD 415 (471)
Q Consensus 343 ~~nv~~~~~vpq~---~lL~~~~~~~~It----HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~~~~~~ 415 (471)
...+.+.++++.. .+++.+++ +|. .|-.+++.||+++|+|+|+--. ..... +.. -+.|..+++
T Consensus 91 ~~~~~~~~~~~~~~l~~~~~~~di--~v~ps~~e~~~~~~~Eam~~G~pvI~~~~----~~~~e-~i~-~~~g~~~~~-- 160 (196)
T d2bfwa1 91 GNVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRD-IIT-NETGILVKA-- 160 (196)
T ss_dssp TTEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESC----HHHHH-HCC-TTTCEEECT--
T ss_pred ceeEEeeeccccccchhccccccc--cccccccccccccchhhhhcCceeeecCC----Cccce-eec-CCceeeECC--
Confidence 3444555888854 57766776 663 4556799999999999998632 22222 233 267877753
Q ss_pred CCCcCHhHHHHHHHHHhC-cH
Q 012083 416 NGIIGRHEIKRKVDELLS-ND 435 (471)
Q Consensus 416 ~~~~~~~~l~~~i~~ll~-~~ 435 (471)
-+.+++.++|.+++. ++
T Consensus 161 ---~~~~~l~~~i~~~l~~~~ 178 (196)
T d2bfwa1 161 ---GDPGELANAILKALELSR 178 (196)
T ss_dssp ---TCHHHHHHHHHHHHHCCH
T ss_pred ---CCHHHHHHHHHHHHhCCH
Confidence 477999999999886 44
|
| >d1j9ja_ c.106.1.1 (A:) SurE homolog TM1662 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: SurE-like superfamily: SurE-like family: SurE-like domain: SurE homolog TM1662 species: Thermotoga maritima [TaxId: 2336]
Probab=92.90 E-value=0.15 Score=43.26 Aligned_cols=113 Identities=9% Similarity=0.066 Sum_probs=61.3
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCC--CCcc
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPE--DDRK 95 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~--~~~~ 95 (471)
||||+.==-+. |---+..|+++|+ ++|+|+++.+...+.-.-.+. +....+++..+...-... .-.+
T Consensus 1 M~ILltNDDGi-~s~gl~~L~~~l~-~~~~V~vvAP~~~~S~~g~ai---------t~~~~l~~~~~~~~~~~~~~~v~G 69 (247)
T d1j9ja_ 1 MRILVTNDDGI-QSKGIIVLAELLS-EEHEVFVVAPDKERSATGHSI---------TIHVPLWMKKVFISERVVAYSTTG 69 (247)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHT-TTSEEEEEEESSCCTTCTTCC---------CCSSCCCEEECCCSSSEEEEEESS
T ss_pred CeEEEEcCCCC-CChHHHHHHHHHh-cCCeEEEEecCCCCcCCcccc---------cCCCCcceEEeecCCCceEEEeCC
Confidence 47776643332 2233567777775 599999999987765543321 222345555443210000 0112
Q ss_pred cHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEEC----------CCcc---hHHHHHHHcCCceEEEeC
Q 012083 96 DEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIAD----------VTFG---WALQVAAKLELKKASIYT 156 (471)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D----------~~~~---~~~~~A~~lgiP~v~~~~ 156 (471)
.+.+ |-.+. +..+.. .+||+||+. .+++ +|+.-|..+|||.|.++.
T Consensus 70 TPaD-cv~~a----------l~~l~~----~~pDlVvSGIN~G~N~g~dv~ySGTVgAA~ea~~~gipsiA~S~ 128 (247)
T d1j9ja_ 70 TPAD-CVKLA----------YNVVMD----KRVDLIVSGVNRGPNMGMDILHSGTVSGAMEGAMMNIPSIAISS 128 (247)
T ss_dssp CHHH-HHHHH----------HHTTST----TCCSEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred chHH-HHHHh----------hhhccc----CcccEEEecccCCCccchhhhhHHHHHHHHHHHhcCCCcceehh
Confidence 2221 21111 122323 699999963 3333 456777899999999974
|
| >d1ccwa_ c.23.6.1 (A:) Glutamate mutase, small subunit {Clostridium cochlearium [TaxId: 1494]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Cobalamin (vitamin B12)-binding domain family: Cobalamin (vitamin B12)-binding domain domain: Glutamate mutase, small subunit species: Clostridium cochlearium [TaxId: 1494]
Probab=89.97 E-value=0.21 Score=38.04 Aligned_cols=45 Identities=13% Similarity=0.092 Sum_probs=39.0
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhh
Q 012083 16 TNVHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERI 60 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~ 60 (471)
++.||++.+.++-.|.....-++..|..+|++|.+++.....+.+
T Consensus 2 ~k~kVvi~~~~gD~H~lG~~mva~~l~~~G~~V~~LG~~~p~e~i 46 (137)
T d1ccwa_ 2 EKKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVLSPQELF 46 (137)
T ss_dssp CCCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEEECHHHH
T ss_pred CCCEEEEEecCCChhHHHHHHHHHHHHHCCCeEEecccccCHHHH
Confidence 678999999999999999999999999999999999865444433
|
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Probab=87.83 E-value=0.72 Score=42.85 Aligned_cols=106 Identities=17% Similarity=0.182 Sum_probs=66.7
Q ss_pred cEEEeccchh---hhhccCcceeeee---ccCcc-hhhHhhhcCCce----eecccccchhhhHHHHHhhhcceeeecCC
Q 012083 346 GKMVKWAPQE---KVLAHPSVACYLT---HCGWN-STMEGISMGVPF----LCWPWGHDHLYIKSCICDDWKIGLWLEPD 414 (471)
Q Consensus 346 v~~~~~vpq~---~lL~~~~~~~~It---HgG~~-s~~eal~~GvP~----l~~P~~~DQ~~na~~v~~~~G~G~~~~~~ 414 (471)
+.+...+++. .+++.+++ ++. .-|+| +..|++++|+|. |++. |-.. .-+. ++-|+.+++
T Consensus 333 v~~~~~~~~~~l~a~~~~Adv--~v~~s~~EG~~lv~~Ea~a~~~p~~~g~lIlS---~~~G---~~~~-l~~g~lVnP- 402 (456)
T d1uqta_ 333 YYLNQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLS---QFAG---AANE-LTSALIVNP- 402 (456)
T ss_dssp EEECSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEE---TTBG---GGGT-CTTSEEECT-
T ss_pred eeccCCcCHHHHhHHHhhhce--eecCCccCCCCcHHHHHHHhCCCCCCCcEEEe---CCCC---CHHH-hCCeEEECc-
Confidence 4445666654 45666666 443 35665 779999999993 3332 1111 1122 444777754
Q ss_pred CCCCcCHhHHHHHHHHHhCcH--HHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHh
Q 012083 415 DNGIIGRHEIKRKVDELLSND--VVRKNALKLKELAQKSVTKEGSSSKNLEYFIKQIT 470 (471)
Q Consensus 415 ~~~~~~~~~l~~~i~~ll~~~--~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~ 470 (471)
.+.++++++|.++|+++ +-+++.+++.+.+++. +...=.+.|+++++
T Consensus 403 ----~d~~~~A~ai~~aL~~~~~er~~~~~~~~~~v~~~-----~~~~W~~~fl~~l~ 451 (456)
T d1uqta_ 403 ----YDRDEVAAALDRALTMSLAERISRHAEMLDVIVKN-----DINHWQECFISDLK 451 (456)
T ss_dssp ----TCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHT-----CHHHHHHHHHHHHH
T ss_pred ----CCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHH
Confidence 58899999999999864 4455556666666543 44555678887775
|
| >d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) species: Escherichia coli [TaxId: 562]
Probab=87.22 E-value=0.11 Score=43.30 Aligned_cols=42 Identities=14% Similarity=0.248 Sum_probs=35.8
Q ss_pred CCcEEEEEcCCCcccHHHH------------HHHHHHHHhCCCeEEEEeCCcch
Q 012083 16 TNVHVLLVSFPAQGHVASL------------MKLAHRLADCRIKVTFVTTEFIC 57 (471)
Q Consensus 16 ~~~~Il~~~~~~~GH~~p~------------~~La~~L~~rGh~Vt~~~~~~~~ 57 (471)
+.+|||+...|+.-++.|. .+||+++..+||+||+++.+...
T Consensus 5 ~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~ 58 (223)
T d1u7za_ 5 KHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL 58 (223)
T ss_dssp TTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC
T ss_pred CCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhccccc
Confidence 4679999999988887764 59999999999999999997653
|
| >d1gsaa1 c.30.1.3 (A:1-122) Prokaryotic glutathione synthetase, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: Prokaryotic glutathione synthetase, N-terminal domain domain: Prokaryotic glutathione synthetase, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=87.00 E-value=0.3 Score=36.24 Aligned_cols=39 Identities=8% Similarity=0.079 Sum_probs=32.0
Q ss_pred cEEEEEcCCCcc---cHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 012083 18 VHVLLVSFPAQG---HVASLMKLAHRLADCRIKVTFVTTEFI 56 (471)
Q Consensus 18 ~~Il~~~~~~~G---H~~p~~~La~~L~~rGh~Vt~~~~~~~ 56 (471)
|||+|+.=|-.+ .-.-.++|+++.++|||+|.++.+...
T Consensus 2 mkI~FimDpie~l~~~kDTT~~Lm~eAq~Rg~~v~~~~~~dL 43 (122)
T d1gsaa1 2 IKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMGDL 43 (122)
T ss_dssp CEEEEECSCGGGCCTTTCHHHHHHHHHHHTTCEEEEECGGGE
T ss_pred cEEEEEeCCHHHCCCCCChHHHHHHHHHHCCCeEEEEecCce
Confidence 899999877443 555688999999999999999887654
|
| >d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: GTPase domain of the signal recognition particle receptor FtsY species: Escherichia coli [TaxId: 562]
Probab=83.63 E-value=4.6 Score=32.64 Aligned_cols=44 Identities=16% Similarity=0.217 Sum_probs=37.5
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhH
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIK 61 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~ 61 (471)
.-|+|+...+-|=..-...||..+.++|..|.+++.+.++.-..
T Consensus 10 ~vi~lvGptGvGKTTTiAKLA~~~~~~g~kV~lit~Dt~R~gA~ 53 (211)
T d2qy9a2 10 FVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAV 53 (211)
T ss_dssp EEEEEECCTTSCHHHHHHHHHHHHHTTTCCEEEECCCTTCHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEecccccccch
Confidence 34567777899999999999999999999999999998876443
|
| >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Thermotoga maritima [TaxId: 2336]
Probab=83.53 E-value=0.54 Score=32.50 Aligned_cols=82 Identities=12% Similarity=0.011 Sum_probs=54.6
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC--cchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCCCCcc
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTE--FICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPEDDRK 95 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 95 (471)
|||-|+-.++.| |.+||+.|+++||.|+--=-. ...+.+++. |+++.. . ....
T Consensus 2 ~~ihfiGIgG~G----Ms~LA~~L~~~G~~VsGSD~~~~~~t~~L~~~--------------Gi~i~~-g--h~~~---- 56 (89)
T d1j6ua1 2 MKIHFVGIGGIG----MSAVALHEFSNGNDVYGSNIEETERTAYLRKL--------------GIPIFV-P--HSAD---- 56 (89)
T ss_dssp CEEEEETTTSHH----HHHHHHHHHHTTCEEEEECSSCCHHHHHHHHT--------------TCCEES-S--CCTT----
T ss_pred cEEEEEeECHHH----HHHHHHHHHhCCCeEEEEeCCCChhHHHHHHC--------------CCeEEe-e--eccc----
Confidence 699999888876 778999999999999875222 122233333 666642 1 0100
Q ss_pred cHHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEECCCcc---hHHHHHHHcCCceE
Q 012083 96 DEAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIADVTFG---WALQVAAKLELKKA 152 (471)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~D~~~~---~~~~~A~~lgiP~v 152 (471)
+ + ..+|+||+..... .-...|+++|||++
T Consensus 57 ~----------------------i------~~~d~vV~SsAI~~~npel~~A~~~gIpv~ 88 (89)
T d1j6ua1 57 N----------------------W------YDPDLVIKTPAVRDDNPEIVRARMERVPIE 88 (89)
T ss_dssp S----------------------C------CCCSEEEECTTCCTTCHHHHHHHHTTCCEE
T ss_pred c----------------------c------CCCCEEEEecCcCCCCHHHHHHHHcCCCcc
Confidence 0 0 3678999887644 45778999999976
|
| >d1l5xa_ c.106.1.1 (A:) SurE homolog PAE2908 (SurE-alpha) {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: SurE-like superfamily: SurE-like family: SurE-like domain: SurE homolog PAE2908 (SurE-alpha) species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=82.62 E-value=1.3 Score=37.85 Aligned_cols=113 Identities=14% Similarity=0.023 Sum_probs=62.6
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCcchhhhHHhhhcCCCCccCCCCCCeEEEeCCCCCCCC-CCccc
Q 012083 18 VHVLLVSFPAQGHVASLMKLAHRLADCRIKVTFVTTEFICERIKESRQLGSFSEMGDAQQLVRIVPLPDGLEPE-DDRKD 96 (471)
Q Consensus 18 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~ 96 (471)
||||+.==-+. |---+.+|+++|.+.| +|+++.+...+.-.-.+. +....+++..+...-... .-.+.
T Consensus 1 M~ILlTNDDGi-~a~Gl~~L~~~l~~~g-~V~vvAP~~~~Sg~g~ai---------t~~~pl~~~~~~~~~~~~~~v~GT 69 (276)
T d1l5xa_ 1 MKILVTNDDGV-HSPGLRLLYQFALSLG-DVDVVAPESPKSATGLGI---------TLHKPLRMYEVDLCGFRAIATSGT 69 (276)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHGGGS-EEEEEEESSCTTTSCSSC---------CCSSCBCEEEEECSSSEEEEESSC
T ss_pred CeEEEEcCCCC-CCHHHHHHHHHHHhcC-CEEEEecCCCCcCcccce---------eCCCCcEEEEeecCCceEEEEcCc
Confidence 47666543332 3445778999999998 699998877665443221 222345555543211100 01122
Q ss_pred HHHHHHHHHhhccHHHHHHHHHHhcccCCCCeeEEEE----------CCCc-c---hHHHHHHHcCCceEEEeCc
Q 012083 97 EAKMTRSISKVMPGYLEELIQKINQQEEDEKITCVIA----------DVTF-G---WALQVAAKLELKKASIYTS 157 (471)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pD~vV~----------D~~~-~---~~~~~A~~lgiP~v~~~~~ 157 (471)
+.+ |-.+. + ..+ . .+||+||+ |..+ + +|+.-|..+|||.|.++..
T Consensus 70 PaD-CV~lg------l----~~~-~----~~pDlVvSGIN~G~N~G~dv~~~SGTVgAA~Ea~~~GipsIA~S~~ 128 (276)
T d1l5xa_ 70 PSD-TVYLA------T----FGL-G----RKYDIVLSGINLGDNTSLQVILSSGTLGAAFQAALLGIPALAYSAY 128 (276)
T ss_dssp HHH-HHHHH------H----HHH-T----SCCSEEEEEEEEBCCCSHHHHTTCHHHHHHHHHHHTTCCEEEEEEC
T ss_pred chh-hhhhh------h----ccC-C----CCCCEEEECCcCCccCCceeEEechHHHHHHHHHhcCCCceeeeec
Confidence 222 11111 1 112 1 68999995 3222 2 5667788999999999853
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=80.93 E-value=2.7 Score=31.84 Aligned_cols=37 Identities=14% Similarity=0.191 Sum_probs=28.9
Q ss_pred CCcEEEEEc-CCCcccHHHHHHHHHHHHhCCCeEEEEeCCcch
Q 012083 16 TNVHVLLVS-FPAQGHVASLMKLAHRLADCRIKVTFVTTEFIC 57 (471)
Q Consensus 16 ~~~~Il~~~-~~~~GH~~p~~~La~~L~~rGh~Vt~~~~~~~~ 57 (471)
.-.||+|+- .|..|. .+|+.|++.||+|++.-.....
T Consensus 8 ~~~kI~iIGg~G~mG~-----~la~~L~~~G~~V~~~d~~~~~ 45 (152)
T d2pv7a2 8 DIHKIVIVGGYGKLGG-----LFARYLRASGYPISILDREDWA 45 (152)
T ss_dssp TCCCEEEETTTSHHHH-----HHHHHHHTTTCCEEEECTTCGG
T ss_pred CCCeEEEEcCCCHHHH-----HHHHHHHHcCCCcEeccccccc
Confidence 338999998 566554 4899999999999998765543
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