Citrus Sinensis ID: 012150

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470
Protein Sequence
MAPNFQVHSTESVGSVTDFLASKYFNYFTYISMEKLARSLEGKGISDDKTGSADENSESHSRASIELSLRKSYYILSKIPSMEDNNEKSEHEMWSGSGSSSEEGNLKEASKKSKTKVKMPKAEKSNNNALSAAIISKKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIVDAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDLTVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQVPLAFYKTTPTSLFSDSDFAGWTFICDKTEENSNGNKEKNFACLSEENGHISAKRQRIECS
Secondary Structure (PSIPRED)
ccccccEEccccHHHHHHHHcccccccccHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccccccHHHHcccccccccccccHHHHHHHHHccccHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHcHHHHccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHcccHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHcccccccccccccccccccccccccccEEEccccccccccccccccccccccccccHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cccccEEEccccHHHHHHHHHHHHHEEEEHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHccccccccccccHccccccccccHHccccccccHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccccEEEEEccccccccccHccHHHHHccHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHcccccccccccHHHHHHHcHHHHHHHHHHHHcccccEEEEccccccccccccccccEEccccccccccccccccEEEcccccccccccccEEEcc
Coil and Loop (DISEMBL)
mapnfqvhstesvgSVTDFLASKYFNYFTYISMEKLARSLegkgisddktgsadenseshsrASIELSLRKSYYILskipsmednneksehemwsgsgssseegnlkeaskksktkvkmpkaeksnNNALSAAIISKKMKSKFTKAWITFLrlplpvdiYKEVLVTLHRAvipflsnpimlcdfltrsydiggVVSVMALSSLFILMTqhgleypnFYEKLYALLVPSIFMAKHRAKFFELLDsclrspllPAYLAAAFVKKLSRlsilvppsgALVIMALIHNLLrrhpsincllhredgnethnddskAEKEIVDAATVanissikpgidhfddeesnpvksnamrSSLWEIdtlrhhycppvsrFVLSLENDltvraktteinvkdfcsgsyatIFGEEIRRRVKQVPlafykttptslfsdsdfagwtficdkteensngnkeknFACLseenghisaKRQRIECS
Flexible Loop (DISEMBL)
mapnfqvhstesvgsvTDFLASKYFNYFTYISMEKLARSLEGKGISDDktgsadenseshsrasielslrKSYYILSKIPSMEDNNEKSEHEMwsgsgssseegnlkeaskksktkvkmpkaeksnnnaLSAAIISKKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIVDAATVAnissikpgidhfddeesnpVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDLTVRAktteinvkdfcsgsyATIFGEEIRRRVKQVPLAFYKttptslfsdsdfAGWTFICDKteensngnkEKNFaclseenghisakrqriecs
Low Complexity Region (SEG)
MAPNFQVHSTESVGSVTDFLASKYFNYFTYISMEKLARSLEGKGISDDKTGSADENSESHSRASIELSLRKSYYILSKIPSMEDNNEKsehemwsgsgssseegNLkeaskksktkvkmpkAEKSNNNALsaaiiskkmkskFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIVDAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDLTVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQVPLAFYKTTPTSLFSDSDFAGWTFICDKTEENSNGNKEKNFACLSEENGHISAKRQRIECS
Disordered region (IsUnstruct)
*************GSVTDFLASKYFNYFTYISMEKL***********************************SYYIL*********************************************************IISKKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLH*****************************************************LWEIDTLRHHYCPPVSRFVLSLENDLTVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQVPLAFYKTTPTSLFSDSDFAGWTFICD**********************************
Disordered Region (DISOPRED)
***N*QVHSTESVGSVTDFLASKYFNYFTYISMEKLARSLE******************HSRASIELSLRKSYYILSK***********************************************************KMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGN*****************************DHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLEND*********INVKDFCSGSYATIFGEEIRRRVKQV*****************FAGWTFI************************************
Disordered Region (DISEMBL)
************VGSVTDFLASKYFNYFTYISMEKLARSLEGK********************SIELSLRKSYYILSKIPSM*******************************************NNNALSAAIISKKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDG*********AEKEIVDAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDLTVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQVPLAFYKTTPTSLFSDSDFAGWTFICDKTEENSNGNKEKNFACLSEENG************
Disordered Region (DISPRO)
**PNFQVHSTESVGSVTDFLASKYFNYFTYISMEKLARSLE********************RASIELSLRKSYYILSKIPSME********************************************NALSAAIISKKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHRED***************************KPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDLTVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQVPLAFYKTTPTSLFSDSDFAGWTFICDK*********************************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
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Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAPNFQVHSTESVGSVTDFLASKYFNYFTYISMEKLARSLEGKGISDDKTGSADENSESHSRASIELSLRKSYYILSKIPSMEDNNEKSEHEMWSGSGSSSEEGNLKEASKKSKTKVKMPKAEKSNNNALSAAIISKKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIVDAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDLTVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQVPLAFYKTTPTSLFSDSDFAGWTFICDKTEENSNGNKEKNFACLSEENGHISAKRQRIECS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	470	2.2.26 [Sep-21-2011]
Q8BHY2	516	Nucleolar complex protein	yes	no	0.529	0.482	0.401	2e-55
Q5ZJC7	508	Nucleolar complex protein	yes	no	0.525	0.486	0.396	3e-55
Q5I0I8	516	Nucleolar complex protein	yes	no	0.529	0.482	0.397	3e-55
Q6NU91	525	Nucleolar complex protein	N/A	no	0.529	0.474	0.392	6e-53
Q4VBT2	525	Nucleolar complex protein	yes	no	0.568	0.508	0.375	2e-52
Q6NRQ2	526	Nucleolar complex protein	N/A	no	0.438	0.391	0.441	7e-51
Q9BVI4	516	Nucleolar complex protein	yes	no	0.529	0.482	0.394	3e-48
Q06512	552	Nucleolar complex protein	yes	no	0.608	0.518	0.355	3e-47
O94372	485	Uncharacterized protein C	yes	no	0.536	0.519	0.380	3e-47
P41843	504	Uncharacterized protein T	yes	no	0.434	0.404	0.283	1e-24

>sp|Q8BHY2|NOC4L_MOUSE Nucleolar complex protein 4 homolog OS=Mus musculus GN=Noc4l PE=2 SV=1

 Score =  217 bits (552), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 112/279 (40%), Positives = 170/279 (60%), Gaps = 30/279 (10%)

Query: 137 KKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVS 196
           K+ K  F + W+ FL+  LP+ +YK+VLV +H +++P L+ P ++ DFLT + D+GG +S
Sbjct: 246 KEHKKAFQEMWLGFLKHKLPLSLYKKVLVAMHDSILPHLAQPTLMIDFLTSACDVGGAIS 305

Query: 197 VMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLA 256
           ++AL+ LFIL+ +H LEYP+FY+KLY LL PSIF  K+RA+FF L D  L S  LPAYL 
Sbjct: 306 LLALNGLFILIHKHNLEYPDFYQKLYGLLDPSIFHVKYRARFFHLADLFLSSSHLPAYLV 365

Query: 257 AAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIV 316
           AAF K+L+RL++  PP   L+++ LI NLLRRHP+   ++HR  G E            +
Sbjct: 366 AAFAKRLARLALTAPPEALLMVLPLICNLLRRHPACRVMVHRPQGPE------------L 413

Query: 317 DAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDL 376
           DA             D +D  E +P +S A+ S LWE+ TL+ HY P VS+    +   L
Sbjct: 414 DA-------------DPYDPTEKDPARSRALESCLWELQTLQQHYHPEVSKAASVINQVL 460

Query: 377 TVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQ-VPLAF 414
           +V     E+++      +   IF +++++++ + VPL F
Sbjct: 461 SV----PEVSIAPLLELTAYEIFEQDLKKKMPESVPLEF 495

Mus musculus (taxid: 10090)

>sp|Q5ZJC7|NOC4L_CHICK Nucleolar complex protein 4 homolog OS=Gallus gallus GN=NOC4L PE=2 SV=1

 Score =  216 bits (550), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 109/275 (39%), Positives = 166/275 (60%), Gaps = 28/275 (10%)

Query: 140 KSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMA 199
           K  F + W+TFL+  LP  +YK+VLV LH +++P+++ P ++ DFLT +Y +GG +S++A
Sbjct: 241 KQAFERMWLTFLKHQLPSGLYKKVLVILHDSILPYMNEPTLMIDFLTVAYGVGGAISLLA 300

Query: 200 LSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAF 259
           L+ LFIL+ QH LEYP+FY+KLY+LL PSI+  K+RA+FF L D  L S  LPAYL AAF
Sbjct: 301 LNGLFILIHQHNLEYPDFYKKLYSLLDPSIYHVKYRARFFHLADLFLSSSHLPAYLVAAF 360

Query: 260 VKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIVDAA 319
           +K+LSRL++  PP   L+++  I NL RRHP+   L+HR +G +  ++D           
Sbjct: 361 IKRLSRLALTAPPEALLMVIPFICNLFRRHPACKVLMHRPNGPQDLSEDP---------- 410

Query: 320 TVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDLTVR 379
                         +  E+  P +S A+ SSLWE+ +L++HY P V++    L   L+  
Sbjct: 411 --------------YIMEQEEPSESRALESSLWELQSLQNHYHPDVAQAAAILNQSLS-- 454

Query: 380 AKTTEINVKDFCSGSYATIFGEEIRRRVKQVPLAF 414
               E ++      S + +F +EI++    VPL F
Sbjct: 455 --EIEDDISGLLELSASELFDKEIKKTSANVPLEF 487

Gallus gallus (taxid: 9031)

>sp|Q5I0I8|NOC4L_RAT Nucleolar complex protein 4 homolog OS=Rattus norvegicus GN=Noc4l PE=2 SV=1

 Score =  216 bits (550), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 111/279 (39%), Positives = 169/279 (60%), Gaps = 30/279 (10%)

Query: 137 KKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVS 196
           K+ +  F + W+ FL+  LP+ +YK+VLV +H +++P L+ P ++ DFLT + D+GG +S
Sbjct: 246 KEQRKAFQEMWLGFLKHKLPLSLYKKVLVAMHDSILPHLAQPTLMIDFLTSACDVGGAIS 305

Query: 197 VMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLA 256
           ++AL+ LFIL+ +H LEYP+FY++LY LL PSIF  K+RA+FF L D  L S  LPAYL 
Sbjct: 306 LLALNGLFILIHKHNLEYPDFYQRLYGLLDPSIFHVKYRARFFHLADLFLSSSHLPAYLV 365

Query: 257 AAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIV 316
           AAF K+L+RL++  PP   L+++ LI NLLRRHP+   ++HR  G E            +
Sbjct: 366 AAFAKRLARLALTAPPEALLMVLPLICNLLRRHPACRVMVHRPQGPE------------L 413

Query: 317 DAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDL 376
           DA             D +D  E +P +S A+ S LWE+ TL+ HY P VSR    +   L
Sbjct: 414 DA-------------DPYDPTEKDPARSRALESCLWELQTLQQHYHPEVSRAASVINQAL 460

Query: 377 TVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQ-VPLAF 414
           +V     E+++      +   IF +++++ + + VPL F
Sbjct: 461 SV----PEVSIAPLLELTAYEIFEQDLKKMMPESVPLEF 495

Rattus norvegicus (taxid: 10116)

>sp|Q6NU91|NOC4B_XENLA Nucleolar complex protein 4 homolog B OS=Xenopus laevis GN=noc4l-b PE=2 SV=1

 Score =  208 bits (530), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 109/278 (39%), Positives = 162/278 (58%), Gaps = 29/278 (10%)

Query: 137 KKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVS 196
           K+ K  F + W++FL+  L V +YK+VL+ LH +++P +S P ++ DFLT +YD+GG +S
Sbjct: 257 KEQKRVFERVWMSFLKHQLSVSLYKKVLLILHESILPHMSKPSLMIDFLTAAYDVGGAIS 316

Query: 197 VMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLA 256
           ++AL+ LFIL+ QH LEYP+FY+KLY+LL PS+F  K+RA+FF L +  L S  LP YL 
Sbjct: 317 LLALNGLFILIHQHNLEYPDFYKKLYSLLEPSVFHVKYRARFFHLANLFLSSTHLPVYLV 376

Query: 257 AAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIV 316
           AAF K+L+RL++  PP   L+I+  I NL+RRHP+   L+HR    +   D         
Sbjct: 377 AAFAKRLARLALTAPPQVLLMIIPFICNLIRRHPACRVLIHRPSAGDLVTD--------- 427

Query: 317 DAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDL 376
                       P I     EE +P KS A+ S LWE++ L+ HY   V R      N +
Sbjct: 428 ------------PYI----MEEQDPAKSQALESCLWELEVLQQHYHGDVVRAA----NVI 467

Query: 377 TVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQVPLAF 414
           +      E +V      S   +F +E++++ K VPL +
Sbjct: 468 SRALSAQESDVSGLLEMSSCELFDKEMKKKFKSVPLEY 505

Xenopus laevis (taxid: 8355)

>sp|Q4VBT2|NOC4L_DANRE Nucleolar complex protein 4 homolog OS=Danio rerio GN=noc4l PE=2 SV=1

 Score =  207 bits (527), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 111/296 (37%), Positives = 173/296 (58%), Gaps = 29/296 (9%)

Query: 123 EKSNNNALSAAIISKKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLC 182
           ++S ++   AA + K+ K  F + W+ FLR  LP  +YK++LV LH +++P +S+P ++ 
Sbjct: 242 QQSKHDDWKAAKL-KEHKRAFEQMWLLFLRYKLPGSMYKKILVILHESILPQMSDPKLMM 300

Query: 183 DFLTRSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELL 242
           DFL+ +YDIGG +S+ AL+ LF+ + +H L+YP+FY+KLY LL PSIF  K+RA+FF L 
Sbjct: 301 DFLSAAYDIGGAISLSALNGLFVPIHEHNLDYPDFYKKLYNLLDPSIFHVKYRARFFHLA 360

Query: 243 DSCLRSPLLPAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGN 302
           +  L S  LP YL AAFVK+L+RLS+  PP+  L+++  I NL+RRHPS   L+HR    
Sbjct: 361 NIFLSSTHLPVYLVAAFVKRLARLSLTAPPTALLILLPFICNLIRRHPSCRVLIHRPSAA 420

Query: 303 ETHNDDSKAEKEIVDAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYC 362
           +                        +P  D +  EE +P + +A+ SSLWEI TL++H+ 
Sbjct: 421 D------------------------EPCDDPYVMEEEDPAQCHALESSLWEIKTLQNHHH 456

Query: 363 PPVSRFVLSLENDLTVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQVPLAFYKTT 418
           P VS+    +   L+ +    E ++ +    +   +   E++   K VPL F   T
Sbjct: 457 PDVSKAATMINEPLSAQ----EEDISELLELTTFELMERELKGEKKTVPLEFDMAT 508

Danio rerio (taxid: 7955)

>sp|Q6NRQ2|NOC41_XENLA Nucleolar complex protein 4 homolog A OS=Xenopus laevis GN=noc4l-a PE=2 SV=1

 Score =  201 bits (512), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 102/231 (44%), Positives = 142/231 (61%), Gaps = 25/231 (10%)

Query: 137 KKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVS 196
           K  K  F + W+ FL+  L V +YK+VL+ LH +++P +S P ++ DFLT +YD+GG +S
Sbjct: 257 KDHKRVFERVWMIFLKHQLSVSLYKKVLLILHESILPHMSKPTLMIDFLTAAYDVGGAIS 316

Query: 197 VMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLA 256
           ++AL+ LFIL+ QH LEYP+FY+KLY+LL PSIF  K+RA+FF L +  L S  LP YL 
Sbjct: 317 LLALNGLFILIHQHNLEYPDFYKKLYSLLEPSIFHVKYRARFFHLANMFLSSTHLPVYLV 376

Query: 257 AAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIV 316
           AAF K+L+RL++  PP   L+I+  I NL+RRHP+   L+HR                  
Sbjct: 377 AAFAKRLARLALTAPPQVLLMIIPFICNLIRRHPACRVLIHRPSAG-------------- 422

Query: 317 DAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSR 367
           D AT           D +  EE +P KS A+ SSLWE++ L+ HY   V R
Sbjct: 423 DLAT-----------DPYIMEEQDPAKSQALESSLWELEVLQQHYHGDVVR 462

Xenopus laevis (taxid: 8355)

>sp|Q9BVI4|NOC4L_HUMAN Nucleolar complex protein 4 homolog OS=Homo sapiens GN=NOC4L PE=1 SV=1

 Score =  192 bits (489), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 110/279 (39%), Positives = 167/279 (59%), Gaps = 30/279 (10%)

Query: 137 KKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVS 196
           K+ +  F   W++FL+  LP+ +YK+VL+ +H A++P L+ P ++ DFLTR+ D+GG +S
Sbjct: 246 KEHRRVFQAMWLSFLKHKLPLSLYKKVLLIVHDAILPQLAQPTLMIDFLTRACDLGGALS 305

Query: 197 VMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLA 256
           ++AL+ LFIL+ +H LEYP+FY KLY LL PS+F  K+RA+FF L D  L S  LPAYL 
Sbjct: 306 LLALNGLFILIHKHNLEYPDFYRKLYGLLDPSVFHVKYRARFFHLADLFLSSSHLPAYLV 365

Query: 257 AAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIV 316
           AAF K+L+RL++  PP   L+++  I NLLRRHP+   L+HR  G E            +
Sbjct: 366 AAFAKRLARLALTAPPEALLMVLPFICNLLRRHPACRVLVHRPHGPE------------L 413

Query: 317 DAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDL 376
           DA             D +D  E +P +S A+ SSLWE+  L+ HY P VS+    +   L
Sbjct: 414 DA-------------DPYDPGEEDPAQSRALESSLWELQALQRHYHPEVSKAASVINQAL 460

Query: 377 TVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQ-VPLAF 414
           ++     E+++      +   IF  +++++  + VPL F
Sbjct: 461 SM----PEVSIAPLLELTAYEIFERDLKKKGPEPVPLEF 495

Homo sapiens (taxid: 9606)

>sp|Q06512|NOC4_YEAST Nucleolar complex protein 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NOC4 PE=1 SV=1

 Score =  189 bits (481), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 112/315 (35%), Positives = 175/315 (55%), Gaps = 29/315 (9%)

Query: 138 KMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDI------ 191
           K KS F K W++ L   L +  YK +L+ LH+ +IP    P  L DFLT SY++      
Sbjct: 252 KFKSNFEKNWLSLLNGQLSLQQYKSILLILHKRIIPHFHTPTKLMDFLTDSYNLQSSNKN 311

Query: 192 GGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLL 251
            GVV ++AL+ LF LM +  LEYPNFY KLY ++ P +   K+RA+FF L+D  L S  L
Sbjct: 312 AGVVPILALNGLFELMKRFNLEYPNFYMKLYQIINPDLMHVKYRARFFRLMDVFLSSTHL 371

Query: 252 PAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKA 311
            A+L A+F+KKL+RL++  PPS  + ++  I+NL+R+HP  NC++   +     N     
Sbjct: 372 SAHLVASFIKKLARLTLESPPSAIVTVIPFIYNLIRKHP--NCMIMLHNPAFISNPFQTP 429

Query: 312 EKEIVDAATVANISSIKPG-IDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVL 370
           ++       VAN+ ++K   +D FD  ES+P  ++A+ SSLWE+ +L  HY P V+    
Sbjct: 430 DQ-------VANLKTLKENYVDPFDVHESDPELTHALDSSLWELASLMEHYHPNVA---- 478

Query: 371 SLENDLTVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQVPLAFYKTTPTSLFSDSDFAG 430
           +L        K    N++DF   +Y ++   E  R++K +P   ++   T++F + D   
Sbjct: 479 TLAKIFAQPFKKLSYNMEDFLDWNYDSLLNAESSRKLKTLPTLEFEAF-TNVFDNED--- 534

Query: 431 WTFICDKTEENSNGN 445
                  +E +S GN
Sbjct: 535 -----GDSEASSQGN 544

Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. Has a role in the nuclear export of 40S pre-ribosomal subunit to the cytoplasm.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|O94372|YG06_SCHPO Uncharacterized protein C1604.06c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1604.06c PE=3 SV=1

 Score =  189 bits (480), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 108/284 (38%), Positives = 165/284 (58%), Gaps = 32/284 (11%)

Query: 139 MKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVM 198
           +K  F ++W++ L LPL V++YK+VL  +H+ VIPFL  P +L DFLT +Y+    VS++
Sbjct: 226 IKRAFQESWLSALSLPLSVNLYKQVLNVIHKRVIPFLQKPNLLMDFLTDAYNSHHAVSLL 285

Query: 199 ALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAA 258
           AL+ LF LM  H L+YP FY KLYALL  ++   K R++FF LLD  L S  LPA L A+
Sbjct: 286 ALNGLFTLMISHNLDYPLFYPKLYALLDRNLLYLKTRSRFFRLLDLFLSSTHLPATLIAS 345

Query: 259 FVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIVDA 318
           F+K+L+RL++  PP    +++  I+N L+RHP+   +LHR                    
Sbjct: 346 FIKRLARLALTAPPGAIAIVIPFIYNCLQRHPTCMQMLHR-------------------- 385

Query: 319 ATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDLTV 378
                 SS + G D FD ++ +P+ + A+ SSLWE+ TL++HY   ++    SL + ++ 
Sbjct: 386 ------SSAESG-DSFDFDQPDPLLTGAIESSLWELSTLQNHYYSNIA----SLASIMSQ 434

Query: 379 RAKTTEINVKDFCSGSYATIFGEEIRRRVK-QVPLAFYKTTPTS 421
           +       ++DF    YAT+   E+RR +K + P+ F K T  S
Sbjct: 435 KFTKPRYELEDFLDHGYATMCDAELRRPLKNEPPIEFEKRTLAS 478

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|P41843|YO93_CAEEL Uncharacterized protein T20B12.3 OS=Caenorhabditis elegans GN=T20B12.3 PE=3 SV=1

 Score =  115 bits (287), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 114/229 (49%), Gaps = 25/229 (10%)

Query: 139 MKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVM 198
           + + +   W+  +   +   +  +++  + + VI  L  P    DF  + +D      ++
Sbjct: 190 ISTDYDNVWMAVMNGKISDKLTLKLIPYITQNVISKLKAPFKSADFFFKMFDKTDYHGIL 249

Query: 199 ALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAA 258
           +L ++F L+++H  EYP FY+K+Y+L  PS+     +     LLDS L S  LP Y+ A+
Sbjct: 250 SLGAIFRLISEHNFEYPKFYDKVYSLTNPSLLYMSQKESILTLLDSFLSSTHLPTYITAS 309

Query: 259 FVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIVDA 318
           F+K+LSR  +L P      I+ LI NL+ RHP+ + L+HRE     ++D           
Sbjct: 310 FLKRLSRCLLLAPIDAQEPILGLIRNLVIRHPNCSELVHREVPQTLYDDP---------- 359

Query: 319 ATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSR 367
                          FD++E++  K+ A+ SSLWE+  L+ H+   V +
Sbjct: 360 ---------------FDNDETDLHKTRALESSLWEMKLLQCHWNQSVRK 393

Caenorhabditis elegans (taxid: 6239)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	470
224104817	575	predicted protein [Populus trichocarpa]	0.887	0.725	0.695	1e-172
255580614	652	nucleolar complex protein, putative [Ric	0.946	0.682	0.640	1e-168
357492085	607	Nucleolar complex protein-like protein [	0.942	0.729	0.631	1e-165
356553291	600	PREDICTED: nucleolar complex protein 4 h	0.927	0.726	0.639	1e-163
356501033	581	PREDICTED: nucleolar complex protein 4 h	0.904	0.731	0.641	1e-157
22325731	577	CCAAT-binding factor [Arabidopsis thalia	0.891	0.726	0.623	1e-152
449500195	608	PREDICTED: nucleolar complex protein 4 h	0.923	0.713	0.576	1e-151
18086412	577	At2g17250/T23A1.11 [Arabidopsis thaliana	0.891	0.726	0.621	1e-151
297832324	582	hypothetical protein ARALYDRAFT_480608 [	0.891	0.719	0.618	1e-151
449474135	419	PREDICTED: nucleolar complex protein 4 h	0.882	0.990	0.591	1e-149

>gi|224104817|ref|XP_002313577.1| predicted protein [Populus trichocarpa] gi|222849985|gb|EEE87532.1| predicted protein [Populus trichocarpa]

 Score =  609 bits (1571), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 302/434 (69%), Positives = 358/434 (82%), Gaps = 17/434 (3%)

Query: 7   VHSTESVGSVTDFLASKYFNY-----FTYISMEKLARSLEGKGISDDKTGSADENSESHS 61
           V STES+  V + LASKYF Y     FTYI++EK A++LE K ISD KT S D+  ES S
Sbjct: 147 VQSTESLDFVLELLASKYFKYIDIRYFTYINIEKFAKNLELKDISDGKTESGDKVGESDS 206

Query: 62  RASIELSLRKSYYILSKIPSMEDNNEKSEHEMWSGSGSSSEEGNLKEASKKSKTKVKMPK 121
           R S+ELS+ K +YI+S IP +ED  + S++E+W GSG           S+  KT+ K  K
Sbjct: 207 RESLELSIYKIHYIISNIPPLEDPKQNSDYELWGGSG----------PSQHLKTEDKDLK 256

Query: 122 AEKSNNNALSAAIISKKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIML 181
           +EK +N+ LSA   +KKMK KFTKAWI+FLRLPLP+D+YKEVL  LH+AVIP LSNPIML
Sbjct: 257 SEKHDNDVLSAGNYAKKMKLKFTKAWISFLRLPLPIDVYKEVLSNLHQAVIPHLSNPIML 316

Query: 182 CDFLTRSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFEL 241
           CDFLTRSYDIGGVVSVMALSSLFILMT+HGLEYPNFYEKLY LL+PSIFMAKHRAKFF+L
Sbjct: 317 CDFLTRSYDIGGVVSVMALSSLFILMTKHGLEYPNFYEKLYVLLLPSIFMAKHRAKFFQL 376

Query: 242 LDSCLRSPLLPAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDG 301
           LDSCL+SPLLPAYLAAAF KKLSRL+++VPPSGALVI+ALIHNLLRRHPSINCL+H+ED 
Sbjct: 377 LDSCLKSPLLPAYLAAAFAKKLSRLALVVPPSGALVIIALIHNLLRRHPSINCLVHQEDC 436

Query: 302 NETHNDDSKAE--KEIVDAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRH 359
           N+T +++S+AE      +     NI++ K GIDHFD+EESNP+KS+A+ SSLWEID+LRH
Sbjct: 437 NDTTDNNSEAEGGDNENEFGASTNIAARKAGIDHFDNEESNPLKSHALGSSLWEIDSLRH 496

Query: 360 HYCPPVSRFVLSLENDLTVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQVPLAFYKTTP 419
           HYCPPVSRFV SLENDLTVRAKTTE+NV+DF SGSYATIFGEEIRRRVKQVP+AFYK  P
Sbjct: 497 HYCPPVSRFVQSLENDLTVRAKTTEVNVEDFSSGSYATIFGEEIRRRVKQVPVAFYKAIP 556

Query: 420 TSLFSDSDFAGWTF 433
           TSLFS++DF+GW+F
Sbjct: 557 TSLFSETDFSGWSF 570

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255580614|ref|XP_002531130.1| nucleolar complex protein, putative [Ricinus communis] gi|223529279|gb|EEF31250.1| nucleolar complex protein, putative [Ricinus communis]

 Score =  599 bits (1544), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 306/478 (64%), Positives = 368/478 (76%), Gaps = 33/478 (6%)

Query: 7   VHSTESVGSVTDFLASKYFNY-----FTYISMEKLARSLEGKGISDDKTGSA-DENSESH 60
           V S   V  V + LASKYFNY     FTYIS++KLA+++      D+K  SA + +  SH
Sbjct: 194 VQSATPVDFVLELLASKYFNYIDICYFTYISLDKLAKTMGENDSPDNKAKSAANGDDASH 253

Query: 61  SRASIELSLRKSYYILSKIPSMEDNNEKSEHEMWSGSGSSSEEGNLKEASKKSKTKVKMP 120
            RAS++LS+ K +YILS IP++ED  E S+++MWSG    +   ++         +V   
Sbjct: 254 PRASMDLSIHKIHYILSCIPTVEDPKENSDNKMWSGLVVFNLYSSVLTLLCMQSIQV--- 310

Query: 121 KAEKSNNNALSAAIISKKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIM 180
                    LSAA ISKKMK KFTKAWI+FLRLPLPV++YKEVL++LH+AVIP++SNP+M
Sbjct: 311 ---------LSAASISKKMKLKFTKAWISFLRLPLPVNVYKEVLISLHQAVIPYISNPLM 361

Query: 181 LCDFLTRSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFE 240
           LCDFLTRSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEKLYALL+PS+FMAKHR+KFF+
Sbjct: 362 LCDFLTRSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLLPSVFMAKHRSKFFQ 421

Query: 241 LLDSCLRSPLLPAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHRED 300
           LLDSCL+SPLLPAYLAAAF K+LSRL++  PPSG +VI+ALIHNLLRRHPSINCL+HRED
Sbjct: 422 LLDSCLKSPLLPAYLAAAFAKRLSRLALTAPPSGGVVIIALIHNLLRRHPSINCLVHRED 481

Query: 301 GNETHNDDSKAEKEIVDAATVAN------ISSIKPGIDHFDDEESNPVKSNAMRSSLWEI 354
           GNE+  D+SKA+ E  DA    N       S+ KPGID F++EE +P+KS+A+RSSLWEI
Sbjct: 482 GNESAADNSKAKGE--DAGDANNSRNGSHASARKPGIDRFNNEECSPIKSSALRSSLWEI 539

Query: 355 DTLRHHYCPPVSRFVLSLENDLTVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQVPLAF 414
           DTL HHYCPPVSRFVLSLENDLTVR KTTE+N+ DF S SYATIF EE+RRRVKQVPLAF
Sbjct: 540 DTLSHHYCPPVSRFVLSLENDLTVRKKTTEVNINDFSSSSYATIFEEELRRRVKQVPLAF 599

Query: 415 YKTTPTSLFSDSDFAGWTFICDKTEENS--NGNKEKNFACLSEENGHISAKRQRIECS 470
           +K TPTSLFS+SDFAGWTF  ++++ N   NG  +K     SEEN     KRQRIECS
Sbjct: 600 FKATPTSLFSESDFAGWTFKYEQSKRNDAVNGTSDK-----SEENDCSPTKRQRIECS 652

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357492085|ref|XP_003616331.1| Nucleolar complex protein-like protein [Medicago truncatula] gi|355517666|gb|AES99289.1| Nucleolar complex protein-like protein [Medicago truncatula]

 Score =  587 bits (1512), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 297/470 (63%), Positives = 349/470 (74%), Gaps = 27/470 (5%)

Query: 7   VHSTESVGSVTDFLASKYFNY-----FTYISMEKLARSLEGKGISDDKTGSADENSESHS 61
           +HST +   + D L SKYF Y     FT+IS+EKL R+L+GK  SDDKT SAD   ES  
Sbjct: 157 IHSTSNAEFLIDLLISKYFKYIDVRYFTFISLEKLTRNLDGKDASDDKTASADGTDESQL 216

Query: 62  RASIELSLRKSYYILSKIPSMEDNNEKSEHEMWSGSGSSSEEGNLKEASKKSKTKVKMPK 121
            +S E  +   YY +S IP +E +++ S  EMWS                   T  K  K
Sbjct: 217 SSSTEFIIHNMYYTISHIPPLEKSDDTSHLEMWS------------------LTDDKQLK 258

Query: 122 AEKSNNNALSAAIISKKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIML 181
           ++K NNN LSAA I+KKMK KFTKAWI +LRLPLP+D++KEVLV LH+AVIP LSNPIML
Sbjct: 259 SKKRNNNVLSAARIAKKMKLKFTKAWIAYLRLPLPLDLFKEVLVNLHQAVIPHLSNPIML 318

Query: 182 CDFLTRSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFEL 241
           CDFLTRSYD+GGVVSVMAL+SLFILMTQHGLEYP FYEKLYALLVPSIFMAKHRA+FF+L
Sbjct: 319 CDFLTRSYDVGGVVSVMALNSLFILMTQHGLEYPKFYEKLYALLVPSIFMAKHRARFFQL 378

Query: 242 LDSCLRSPLLPAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDG 301
           LDSCL+SPLLPAYLAA+F KKLSRL + VPPSGALVI +L+HN+LRRHPSINCL+HRE+ 
Sbjct: 379 LDSCLKSPLLPAYLAASFAKKLSRLLLSVPPSGALVITSLVHNILRRHPSINCLVHREEV 438

Query: 302 NET--HNDDSKAEKEIVDAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRH 359
           NE   H  D +    + +A  VA     K G+DHF+ EES+P+KS AMRSSLWEIDT  H
Sbjct: 439 NEDSEHRTDEETNSNLDNAHNVAKPCQ-KSGLDHFNIEESDPMKSGAMRSSLWEIDTALH 497

Query: 360 HYCPPVSRFVLSLENDLTVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQVPLAFYKTTP 419
           HYCPPVSRF LSL  DLTVRAKT+E+N+ DF +GSYATI G EI RRVKQVPLAFYKTTP
Sbjct: 498 HYCPPVSRFALSLGTDLTVRAKTSEVNIGDFSAGSYATILGAEITRRVKQVPLAFYKTTP 557

Query: 420 TSLFSDSDFAGWTFICDKTEENSNGNKEKNFACLSEENGHISAKRQRIEC 469
           +SLFS++DFAGWTF C++  E    N E     L ++  H  AKRQRIEC
Sbjct: 558 SSLFSENDFAGWTFKCEENSETIIDNNENGAKDLLDQE-HSPAKRQRIEC 606

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356553291|ref|XP_003544990.1| PREDICTED: nucleolar complex protein 4 homolog [Glycine max]

 Score =  581 bits (1498), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 287/449 (63%), Positives = 343/449 (76%), Gaps = 13/449 (2%)

Query: 7   VHSTESVGSVTDFLASKYFNY-----FTYISMEKLARSLEGKGISDDKTGSADENSESHS 61
           V+ST     + D LASKYF Y     FT+IS++KLA +LEGK +SDDK  +AD +SES  
Sbjct: 151 VYSTSPPTFLVDLLASKYFKYIDVRYFTFISLKKLASTLEGKDVSDDKIANADGSSESQM 210

Query: 62  RASIELSLRKSYYILSKIPSMEDNNEKSEHEMWSGSGSSSEEGNLKEASKKSKTKVKMPK 121
            +++E  +   YY +S +P  + ++  SE EMWS S     E + K+         K  K
Sbjct: 211 SSNMECVIHNMYYTISHVPPHQGSDNTSELEMWSSS-----ESDHKQLYGDKGADDKPQK 265

Query: 122 AEKSNNNALSAAIISKKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIML 181
            +K N N LSAA I+KKMK KFTKAWI +LRLPLP+D+YKEVLV LH+AVIP LSNPIML
Sbjct: 266 FQKPNKNVLSAAKIAKKMKLKFTKAWIAYLRLPLPIDVYKEVLVNLHQAVIPHLSNPIML 325

Query: 182 CDFLTRSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFEL 241
           CDFLTRSYD+GGVVSVMALSSLF+LMTQ+GLEYPNFYEKLYALLVPSIFMAKHRA+FF+L
Sbjct: 326 CDFLTRSYDVGGVVSVMALSSLFVLMTQYGLEYPNFYEKLYALLVPSIFMAKHRARFFQL 385

Query: 242 LDSCLRSPLLPAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDG 301
           LDSCL+SPLLPAYLAA+F KKLSRL + VPPSGALVI ALIHN+LRRHPSINCL+HREDG
Sbjct: 386 LDSCLKSPLLPAYLAASFAKKLSRLLLSVPPSGALVITALIHNILRRHPSINCLVHREDG 445

Query: 302 NETHNDDSKAEKEIV---DAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLR 358
            +    D + ++ +    D A    + S K GIDHF+  E++P KS AMRSSLWEIDT+ 
Sbjct: 446 VDEGKGDHRTDEGMATNSDNAKTVAMPSQKSGIDHFNSSETDPKKSGAMRSSLWEIDTIL 505

Query: 359 HHYCPPVSRFVLSLENDLTVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQVPLAFYKTT 418
           HHYCPP SRF LSL NDLTVRAKTTE+NV DF +GSYATI G EI RRVKQVPLAF+K T
Sbjct: 506 HHYCPPASRFALSLGNDLTVRAKTTEVNVGDFSAGSYATILGAEISRRVKQVPLAFFKAT 565

Query: 419 PTSLFSDSDFAGWTFICDKTEENSNGNKE 447
           P+SLFS++DFAGWTF C++T +  N N +
Sbjct: 566 PSSLFSETDFAGWTFKCEETPKMINDNND 594

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356501033|ref|XP_003519333.1| PREDICTED: nucleolar complex protein 4 homolog [Glycine max]

 Score =  560 bits (1443), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 284/443 (64%), Positives = 339/443 (76%), Gaps = 18/443 (4%)

Query: 7   VHSTESVGSVTDFLASKYFNY-----FTYISMEKLARSLEGKGISDDKTGSADENSESHS 61
           V+S+     + D LA+KYF Y     FT+IS++KLA +LEGK +S    G+AD  SES  
Sbjct: 146 VYSSSPPTFLVDLLATKYFKYIDVRYFTFISLKKLASTLEGKDVS----GAADGTSESQL 201

Query: 62  RASIELSLRKSYYILSKIPSMEDNNEKSEHEMWSGSGSSSEEGNLKEASKKSKTKVKMPK 121
            +++E  +   YY +S +P  + ++  S+ EMWS     S E + K+ S       K  K
Sbjct: 202 SSNMECVIHNMYYTISHVPPHKGSDNTSDLEMWS-----SSESDHKQLSGDKGADDKPQK 256

Query: 122 AEKSNNNALSAAIISKKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIML 181
           ++K N N LSAA I+KKMK KFTKAWI +LRLPLP D+YKEVLV LH+AVIP LSNPI+L
Sbjct: 257 SQKPNKNVLSAAKIAKKMKLKFTKAWIAYLRLPLPHDVYKEVLVCLHQAVIPHLSNPIIL 316

Query: 182 CDFLTRSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFEL 241
           CDFLTRSYD+GGVVSVMALSSLF+LMTQ+GLEYPNFY+KLYALLVPSIFMAKHRA+FF+L
Sbjct: 317 CDFLTRSYDVGGVVSVMALSSLFVLMTQYGLEYPNFYDKLYALLVPSIFMAKHRARFFQL 376

Query: 242 LDSCLRSPLLPAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDG 301
           LDSCL+SPLLPAYLAA+F KKLSRL + VPPSGALVI ALIHNLLRRHPSINCL+HREDG
Sbjct: 377 LDSCLKSPLLPAYLAASFAKKLSRLLLSVPPSGALVITALIHNLLRRHPSINCLVHREDG 436

Query: 302 -NETHNDDSKAEKEIVDAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHH 360
            +E   D+  A     D A  A + S K GIDHF+  E++P KS AMRSSLWEIDT+ HH
Sbjct: 437 VDEGKGDEGMATNS--DNAKTA-MPSQKSGIDHFNSSETDPKKSGAMRSSLWEIDTILHH 493

Query: 361 YCPPVSRFVLSLENDLTVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQVPLAFYKTTPT 420
           YCPP SRF LSL NDLTVRAKTTE+NV DF +GSYATI G EI RRVKQVPLAF+K TP+
Sbjct: 494 YCPPASRFALSLGNDLTVRAKTTEVNVGDFSAGSYATILGAEISRRVKQVPLAFFKATPS 553

Query: 421 SLFSDSDFAGWTFICDKTEENSN 443
           SLFS++DFAGWTF C++T +  N
Sbjct: 554 SLFSETDFAGWTFKCEETPKMIN 576

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|22325731|ref|NP_179316.2| CCAAT-binding factor [Arabidopsis thaliana] gi|330251509|gb|AEC06603.1| CCAAT-binding factor [Arabidopsis thaliana]

 Score =  545 bits (1403), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 273/438 (62%), Positives = 332/438 (75%), Gaps = 19/438 (4%)

Query: 7   VHSTESVGSVTDFLASKYFNY-----FTYISMEKLARSLEGKGISDDKTGSADENSESHS 61
           +HS   +    D L SKYF Y     FTYISMEK  ++LE   +S D+T   +  +ES S
Sbjct: 151 IHSEVDIEIFLDILTSKYFKYIDVRYFTYISMEKFVKTLEA-SVSADRTVIENNEAESDS 209

Query: 62  RASIELSLRKSYYILSKIPSMEDNNEKSEHEMWSGSGSSSEEGNLKEASKKSKTKVKMPK 121
           + S+ELS+RK Y +LS+IP  E   EKS+HEMWSGS  S  E   K   KK KT      
Sbjct: 210 KESLELSVRKIYQVLSQIPPPEKQAEKSQHEMWSGSDESISE---KPTDKKKKT------ 260

Query: 122 AEKSNNNALSAAIISKKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIML 181
            EK ++  LS A ISK+MK KFTKAWI+FLRLPLP+D+YKEVL ++H  VIP LSNP ML
Sbjct: 261 -EKGDSTLLSPATISKRMKLKFTKAWISFLRLPLPIDVYKEVLASIHLTVIPHLSNPTML 319

Query: 182 CDFLTRSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFEL 241
           CDFLT+SYDIGGVVSVMALSSLFILMTQHGLEYP FYEKLYALLVPS+F+AKHRAKF +L
Sbjct: 320 CDFLTKSYDIGGVVSVMALSSLFILMTQHGLEYPFFYEKLYALLVPSVFVAKHRAKFLQL 379

Query: 242 LDSCLRSPLLPAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDG 301
           LD+CL+S +LPAYLAA+F KKLSRLS+ +PP+G+LVI ALI+NLLRR+P+IN L+     
Sbjct: 380 LDACLKSSMLPAYLAASFTKKLSRLSLSIPPAGSLVITALIYNLLRRNPTINHLVQEIVE 439

Query: 302 NETHNDDSKAEKEIVDAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHY 361
           N    D++  E    + +    I   K GID+F+++ES+P KS A++SSLWEIDTLRHHY
Sbjct: 440 NA---DEANTEAGEHNESQPKTIKKRKLGIDYFNNQESDPKKSGALKSSLWEIDTLRHHY 496

Query: 362 CPPVSRFVLSLENDLTVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQVPLAFYKTTPTS 421
           CPPVSRF+ SLE +LT+R+KTTE+ ++DFCSGSYATIFG+EIRRRVKQVPLAFYKT PTS
Sbjct: 497 CPPVSRFISSLETNLTIRSKTTEMKIEDFCSGSYATIFGDEIRRRVKQVPLAFYKTVPTS 556

Query: 422 LFSDSDFAGWTFICDKTE 439
           LF+DSDF GWTF   + E
Sbjct: 557 LFADSDFPGWTFTIPQEE 574

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449500195|ref|XP_004161032.1| PREDICTED: nucleolar complex protein 4 homolog B-like [Cucumis sativus]

 Score =  543 bits (1398), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 272/472 (57%), Positives = 361/472 (76%), Gaps = 38/472 (8%)

Query: 8   HSTESVGSVTDFLASKYFNY-----FTYISMEKLARSLEGKGISDDKTGSADENSESHSR 62
           HS+  V ++   L  KYF+Y     FTYIS+++LA++ + + +S D  G        HS+
Sbjct: 166 HSSTPVDTLIALLVKKYFHYLDVRYFTYISIKELAKTFKAEYMSGDVGG--------HSK 217

Query: 63  ASIELSLRKSYYILSKIPSMEDNNEKSEHEMWSGSGSSSEEGNLKEASKKSKTKVKMPKA 122
             +E  +   + I+S IP +E++N+ S++ MW  SG +    + +EA +     +KM K 
Sbjct: 218 EGVEF-IHIVHSIISSIPPLENSNQ-SDYTMWVESGDNKVLSDDQEAKQ-----LKMKKN 270

Query: 123 EKSNN----NALSAAIISKKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNP 178
           ++ N       L+++ I ++MK KF+KAWI+FL+LPLP+D+YKEVLV L + VIP+LS P
Sbjct: 271 DEENIANTLQVLTSSKIVRRMKLKFSKAWISFLKLPLPIDVYKEVLVILDQEVIPYLSKP 330

Query: 179 IMLCDFLTRSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKF 238
           I+L DFLT+SYDIGGV+SVMALSSLF+LMT++GLEYPNFYEKLYALLVPSIFMAKHRAKF
Sbjct: 331 IILSDFLTKSYDIGGVISVMALSSLFLLMTKYGLEYPNFYEKLYALLVPSIFMAKHRAKF 390

Query: 239 FELLDSCLRSPLLPAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHR 298
           F+LLDSCL+SPLLPAYLAAAF KKLSRLS++VPPSGALVI+ALIHNLLRRHPSINCL+HR
Sbjct: 391 FQLLDSCLKSPLLPAYLAAAFAKKLSRLSLVVPPSGALVIIALIHNLLRRHPSINCLVHR 450

Query: 299 EDGNETHNDDSKAEKEIVDAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLR 358
           E+ +E+ ND+S +E+      T A+   +KPGIDHF+ EE++P+KS+A+RSSLWEID+LR
Sbjct: 451 ENVSESKNDNSTSEE--AAKGTDADTPKMKPGIDHFNYEEADPIKSSALRSSLWEIDSLR 508

Query: 359 HHYCPPVSRFVLSLENDLTVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQVPLAFYKTT 418
           HHYCPPVSR VLSLENDLTVR+KTTEI+VKDF +GSY+TI G+E+++++K+VPLAFY+  
Sbjct: 509 HHYCPPVSRLVLSLENDLTVRSKTTEIDVKDFVAGSYSTILGQELKKKLKRVPLAFYQAP 568

Query: 419 PTSLFSDSDFAGWTFICDKTEENSNGNKEKNFACLSEENGHISAKRQRIECS 470
           PT+LFS+SDFAGW+F         N + EKN     + + H+SAKRQR+  S
Sbjct: 569 PTTLFSESDFAGWSF--------DNEHSEKNI----DSSDHLSAKRQRVGSS 608

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18086412|gb|AAL57663.1| At2g17250/T23A1.11 [Arabidopsis thaliana]

 Score =  543 bits (1398), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 272/438 (62%), Positives = 332/438 (75%), Gaps = 19/438 (4%)

Query: 7   VHSTESVGSVTDFLASKYFNY-----FTYISMEKLARSLEGKGISDDKTGSADENSESHS 61
           +HS   +    D L SKYF Y     FTYISMEK  ++LE   +S D+T   +  +ES S
Sbjct: 151 IHSEVDIEIFLDILTSKYFKYIDVRYFTYISMEKFVKTLEA-SVSADRTVIENNEAESDS 209

Query: 62  RASIELSLRKSYYILSKIPSMEDNNEKSEHEMWSGSGSSSEEGNLKEASKKSKTKVKMPK 121
           + S+ELS+RK Y +LS+IP  E   EKS+HEMWSGS  S  E   K   KK KT      
Sbjct: 210 KESLELSVRKIYQVLSQIPPPEKQAEKSQHEMWSGSDESISE---KPTDKKKKT------ 260

Query: 122 AEKSNNNALSAAIISKKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIML 181
            EK ++  LS A ISK+MK KFTKAWI+FLRLPLP+D+YKEVL ++H  VIP LSNP ML
Sbjct: 261 -EKGDSTLLSPATISKRMKLKFTKAWISFLRLPLPIDVYKEVLASIHLTVIPHLSNPTML 319

Query: 182 CDFLTRSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFEL 241
           CDFLT+SYDIGGVVSVMALSSLFILMT+HGLEYP FYEKLYALLVPS+F+AKHRAKF +L
Sbjct: 320 CDFLTKSYDIGGVVSVMALSSLFILMTRHGLEYPFFYEKLYALLVPSVFVAKHRAKFLQL 379

Query: 242 LDSCLRSPLLPAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDG 301
           LD+CL+S +LPAYLAA+F KKLSRLS+ +PP+G+LVI ALI+NLLRR+P+IN L+     
Sbjct: 380 LDACLKSSMLPAYLAASFTKKLSRLSLSIPPAGSLVITALIYNLLRRNPTINHLVQEIVE 439

Query: 302 NETHNDDSKAEKEIVDAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHY 361
           N    D++  E    + +    I   K GID+F+++ES+P KS A++SSLWEIDTLRHHY
Sbjct: 440 NA---DEANTEAGEHNESQPKTIKKRKLGIDYFNNQESDPKKSGALKSSLWEIDTLRHHY 496

Query: 362 CPPVSRFVLSLENDLTVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQVPLAFYKTTPTS 421
           CPPVSRF+ SLE +LT+R+KTTE+ ++DFCSGSYATIFG+EIRRRVKQVPLAFYKT PTS
Sbjct: 497 CPPVSRFISSLETNLTIRSKTTEMKIEDFCSGSYATIFGDEIRRRVKQVPLAFYKTVPTS 556

Query: 422 LFSDSDFAGWTFICDKTE 439
           LF+DSDF GWTF   + E
Sbjct: 557 LFADSDFPGWTFTIPQEE 574

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297832324|ref|XP_002884044.1| hypothetical protein ARALYDRAFT_480608 [Arabidopsis lyrata subsp. lyrata] gi|297329884|gb|EFH60303.1| hypothetical protein ARALYDRAFT_480608 [Arabidopsis lyrata subsp. lyrata]

 Score =  543 bits (1398), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 271/438 (61%), Positives = 336/438 (76%), Gaps = 19/438 (4%)

Query: 7   VHSTESVGSVTDFLASKYFNY-----FTYISMEKLARSLEGKGISDDKTGSADENSESHS 61
           +HS   +    D L SKYF Y     FTYISMEK  ++LE   +S D+T   +  +E+ S
Sbjct: 156 IHSEVDIEIFLDILTSKYFKYIDVRYFTYISMEKFVKTLEA-SVSADRTAIENSEAENDS 214

Query: 62  RASIELSLRKSYYILSKIPSMEDNNEKSEHEMWSGSGSSSEEGNLKEASKKSKTKVKMPK 121
           + S+ELS+RK Y +LS+IP  E   EKS HEMWSGS  SS E   K   KK KT      
Sbjct: 215 KESLELSVRKIYQVLSQIPPPEKLAEKSHHEMWSGSDESSSE---KPTDKKKKT------ 265

Query: 122 AEKSNNNALSAAIISKKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIML 181
            E+ ++  LS   ISK+MK KFTKAWI+FLRLPLP+D+YKEVL ++H  VIP LSNP ML
Sbjct: 266 -EEGDSTLLSPTTISKRMKLKFTKAWISFLRLPLPIDVYKEVLASIHLTVIPHLSNPTML 324

Query: 182 CDFLTRSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFEL 241
           CDFLT+SYDIGGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLVPS+F+AKHRAKF +L
Sbjct: 325 CDFLTKSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLVPSVFVAKHRAKFLQL 384

Query: 242 LDSCLRSPLLPAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDG 301
           LD+CL+S +LPAYLAA+F KKLSRLS+ +PP+G+LVI ALI+NLLRRHP+IN L+ +E  
Sbjct: 385 LDACLKSSMLPAYLAASFTKKLSRLSLSIPPAGSLVITALIYNLLRRHPTINHLV-QETV 443

Query: 302 NETHNDDSKAEKEIVDAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHY 361
             T+  +++A++   + +    I   K GID+F+++ES+P KS A++SSLWEIDTLRHHY
Sbjct: 444 ENTNEGNTEADEH--NESQPKTIKKRKLGIDYFNNQESDPKKSGALKSSLWEIDTLRHHY 501

Query: 362 CPPVSRFVLSLENDLTVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQVPLAFYKTTPTS 421
           CPPVSRF+ SLE +LT+R+KTTE+ ++DF SGSYATIFG+EIRRRVKQVPLAFYKT PTS
Sbjct: 502 CPPVSRFISSLETNLTIRSKTTEMKIEDFSSGSYATIFGDEIRRRVKQVPLAFYKTVPTS 561

Query: 422 LFSDSDFAGWTFICDKTE 439
           LF+DSDF GW+F   + E
Sbjct: 562 LFADSDFPGWSFTIPQEE 579

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449474135|ref|XP_004154083.1| PREDICTED: nucleolar complex protein 4 homolog B-like, partial [Cucumis sativus]

 Score =  534 bits (1375), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 265/448 (59%), Positives = 350/448 (78%), Gaps = 33/448 (7%)

Query: 27  YFTYISMEKLARSLEGKGISDDKTGSADENSESHSRASIELSLRKSYYILSKIPSMEDNN 86
           YFTYIS+++LA++ + + +S D  G        HS+  +E  +   + I+S IP +E++N
Sbjct: 1   YFTYISIKELAKTFKAEYMSGDVGG--------HSKEGVEF-IHIVHSIISSIPPLENSN 51

Query: 87  EKSEHEMWSGSGSSSEEGNLKEASKKSKTKVKMPKAEKSNN----NALSAAIISKKMKSK 142
           + S++ MW  SG +    + +EA +     +KM K ++ N       L+++ I ++MK K
Sbjct: 52  Q-SDYTMWVESGDNKVLSDDQEAKQ-----LKMKKNDEENIANTLQVLTSSKIVRRMKLK 105

Query: 143 FTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSS 202
           F+KAWI+FL+LPLP+D+YKEVLV L + VIP+LS PI+L DFLT+SYDIGGV+SVMALSS
Sbjct: 106 FSKAWISFLKLPLPIDVYKEVLVILDQEVIPYLSKPIILSDFLTKSYDIGGVISVMALSS 165

Query: 203 LFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKK 262
           LF+LMT++GLEYPNFYEKLYALLVPSIFMAKHRAKFF+LLDSCL+SPLLPAYLAAAF KK
Sbjct: 166 LFLLMTKYGLEYPNFYEKLYALLVPSIFMAKHRAKFFQLLDSCLKSPLLPAYLAAAFAKK 225

Query: 263 LSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIVDAATVA 322
           LSRLS++VPPSGALVI+ALIHNLLRRHPSINCL+HRE+ +E+ ND+S +E+      T A
Sbjct: 226 LSRLSLVVPPSGALVIIALIHNLLRRHPSINCLVHRENVSESKNDNSTSEE--AAKGTDA 283

Query: 323 NISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDLTVRAKT 382
           +   +KPGIDHF+ EE++P+KS+A+RSSLWEID+LRHHYCPPVSR VLSLENDLTVR+KT
Sbjct: 284 DTPKMKPGIDHFNYEEADPIKSSALRSSLWEIDSLRHHYCPPVSRLVLSLENDLTVRSKT 343

Query: 383 TEINVKDFCSGSYATIFGEEIRRRVKQVPLAFYKTTPTSLFSDSDFAGWTFICDKTEENS 442
           TEI+VKDF +GSY+TI G+E+++++K+VPLAFY+  PT+LFS+SDFAGW+F         
Sbjct: 344 TEIDVKDFVAGSYSTILGQELKKKLKRVPLAFYQAPPTTLFSESDFAGWSF--------D 395

Query: 443 NGNKEKNFACLSEENGHISAKRQRIECS 470
           N + EKN     + + H+SAKRQR+  S
Sbjct: 396 NEHSEKNI----DSSDHLSAKRQRVGSS 419

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	470
TAIR|locus:2059657	577	EMB2762 "AT2G17250" [Arabidops	0.668	0.544	0.665	4.9e-127
UNIPROTKB|F1Q279	516	NOC4L "Uncharacterized protein	0.363	0.331	0.508	9.9e-56
UNIPROTKB|F1P3D2	519	EP400 "Uncharacterized protein	0.353	0.319	0.5	9.9e-54
UNIPROTKB|Q5ZJC7	508	NOC4L "Nucleolar complex prote	0.353	0.326	0.5	9.9e-54
MGI|MGI:2140843	516	Noc4l "nucleolar complex assoc	0.365	0.333	0.491	9.9e-54
UNIPROTKB|F1RFR4	516	NOC4L "Uncharacterized protein	0.365	0.333	0.505	1.3e-53
RGD|1310661	516	Noc4l "nucleolar complex assoc	0.365	0.333	0.485	1.6e-53
ZFIN|ZDB-GENE-050522-98	525	noc4l "nucleolar complex assoc	0.365	0.327	0.476	2.6e-51
CGD|CAL0002495	562	NOC4 [Candida albicans (taxid:	0.365	0.306	0.436	2.5e-47
UNIPROTKB|Q59U49	562	CaO19.1902 "Putative uncharact	0.365	0.306	0.436	2.5e-47

TAIR|locus:2059657 EMB2762 "AT2G17250" [Arabidopsis thaliana (taxid:3702)]

 Score = 1100 (392.3 bits), Expect = 4.9e-127, Sum P(2) = 4.9e-127
 Identities = 211/317 (66%), Positives = 255/317 (80%)

Query:   123 EKSNNNALXXXXXXXXXXXXFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLC 182
             EK ++  L            FTKAWI+FLRLPLP+D+YKEVL ++H  VIP LSNP MLC
Sbjct:   261 EKGDSTLLSPATISKRMKLKFTKAWISFLRLPLPIDVYKEVLASIHLTVIPHLSNPTMLC 320

Query:   183 DFLTRSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELL 242
             DFLT+SYDIGGVVSVMALSSLFILMTQHGLEYP FYEKLYALLVPS+F+AKHRAKF +LL
Sbjct:   321 DFLTKSYDIGGVVSVMALSSLFILMTQHGLEYPFFYEKLYALLVPSVFVAKHRAKFLQLL 380

Query:   243 DSCLRSPLLPAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGN 302
             D+CL+S +LPAYLAA+F KKLSRLS+ +PP+G+LVI ALI+NLLRR+P+IN L+     N
Sbjct:   381 DACLKSSMLPAYLAASFTKKLSRLSLSIPPAGSLVITALIYNLLRRNPTINHLVQEIVEN 440

Query:   303 ETHNDDSKAEKEIVDAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYC 362
                 D++  E    + +    I   K GID+F+++ES+P KS A++SSLWEIDTLRHHYC
Sbjct:   441 A---DEANTEAGEHNESQPKTIKKRKLGIDYFNNQESDPKKSGALKSSLWEIDTLRHHYC 497

Query:   363 PPVSRFVLSLENDLTVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQVPLAFYKTTPTSL 422
             PPVSRF+ SLE +LT+R+KTTE+ ++DFCSGSYATIFG+EIRRRVKQVPLAFYKT PTSL
Sbjct:   498 PPVSRFISSLETNLTIRSKTTEMKIEDFCSGSYATIFGDEIRRRVKQVPLAFYKTVPTSL 557

Query:   423 FSDSDFAGWTFICDKTE 439
             F+DSDF GWTF   + E
Sbjct:   558 FADSDFPGWTFTIPQEE 574

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0016020 "membrane" evidence=IDA

GO:0000478 "endonucleolytic cleavage involved in rRNA processing" evidence=RCA

GO:0009220 "pyrimidine ribonucleotide biosynthetic process" evidence=RCA

GO:0005654 "nucleoplasm" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0006364 "rRNA processing" evidence=IMP

GO:0009793 "embryo development ending in seed dormancy" evidence=IMP

UNIPROTKB|F1Q279 NOC4L "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 461 (167.3 bits), Expect = 9.9e-56, Sum P(2) = 9.9e-56
 Identities = 87/171 (50%), Positives = 120/171 (70%)

Query:   143 FTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSS 202
             F   W+ FL+  LP+ +YK+VLV +H +++P L+ P ++ DFLTR+YD+GG +S++AL+ 
Sbjct:   252 FQLMWLGFLKHELPLGLYKKVLVIMHDSILPHLAQPSLMIDFLTRAYDMGGAISLLALNG 311

Query:   203 LFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKK 262
             LFIL+ QH LEYP+FY KLY LL PSIF  K+RA+FF L D  L S  LPAYL AAF K+
Sbjct:   312 LFILIHQHNLEYPDFYRKLYGLLDPSIFHVKYRARFFHLADLFLSSSHLPAYLVAAFAKR 371

Query:   263 LSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEK 313
             LSRL++  PP   L+++  I NLLRRHP+   L+H   G+E  +D    E+
Sbjct:   372 LSRLALTAPPEALLMVLPFICNLLRRHPACRVLVHHPLGHELDSDPFDPEE 422

GO:0042254 "ribosome biogenesis" evidence=IEA

UNIPROTKB|F1P3D2 EP400 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 462 (167.7 bits), Expect = 9.9e-54, Sum P(2) = 9.9e-54
 Identities = 83/166 (50%), Positives = 122/166 (73%)

Query:   143 FTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSS 202
             F + W+TFL+  LP  +YK+VLV LH +++P+++ P ++ DFLT +Y +GG +S++AL+ 
Sbjct:   255 FERMWLTFLKHQLPSGLYKKVLVILHDSILPYMNEPTLMIDFLTVAYGVGGAISLLALNG 314

Query:   203 LFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKK 262
             LFIL+ QH LEYP+FY+KLY+LL PSI+  K+RA+FF L D  L S  LPAYL AAF+K+
Sbjct:   315 LFILIHQHNLEYPDFYKKLYSLLDPSIYHVKYRARFFHLADLFLSSSHLPAYLVAAFIKR 374

Query:   263 LSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDD 308
             LSRL++  PP   L+++  I NL RRHP+   L+HR +G +  ++D
Sbjct:   375 LSRLALTAPPEALLMVIPFICNLFRRHPACKVLMHRPNGPQDLSED 420

GO:0042254 "ribosome biogenesis" evidence=IEA

UNIPROTKB|Q5ZJC7 NOC4L "Nucleolar complex protein 4 homolog" [Gallus gallus (taxid:9031)]

 Score = 462 (167.7 bits), Expect = 9.9e-54, Sum P(2) = 9.9e-54
 Identities = 83/166 (50%), Positives = 122/166 (73%)

Query:   143 FTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSS 202
             F + W+TFL+  LP  +YK+VLV LH +++P+++ P ++ DFLT +Y +GG +S++AL+ 
Sbjct:   244 FERMWLTFLKHQLPSGLYKKVLVILHDSILPYMNEPTLMIDFLTVAYGVGGAISLLALNG 303

Query:   203 LFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKK 262
             LFIL+ QH LEYP+FY+KLY+LL PSI+  K+RA+FF L D  L S  LPAYL AAF+K+
Sbjct:   304 LFILIHQHNLEYPDFYKKLYSLLDPSIYHVKYRARFFHLADLFLSSSHLPAYLVAAFIKR 363

Query:   263 LSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDD 308
             LSRL++  PP   L+++  I NL RRHP+   L+HR +G +  ++D
Sbjct:   364 LSRLALTAPPEALLMVIPFICNLFRRHPACKVLMHRPNGPQDLSED 409

GO:0042254 "ribosome biogenesis" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0031965 "nuclear membrane" evidence=IEA

MGI|MGI:2140843 Noc4l "nucleolar complex associated 4 homolog (S. cerevisiae)" [Mus musculus (taxid:10090)]

 Score = 454 (164.9 bits), Expect = 9.9e-54, Sum P(2) = 9.9e-54
 Identities = 85/173 (49%), Positives = 121/173 (69%)

Query:   143 FTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSS 202
             F + W+ FL+  LP+ +YK+VLV +H +++P L+ P ++ DFLT + D+GG +S++AL+ 
Sbjct:   252 FQEMWLGFLKHKLPLSLYKKVLVAMHDSILPHLAQPTLMIDFLTSACDVGGAISLLALNG 311

Query:   203 LFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKK 262
             LFIL+ +H LEYP+FY+KLY LL PSIF  K+RA+FF L D  L S  LPAYL AAF K+
Sbjct:   312 LFILIHKHNLEYPDFYQKLYGLLDPSIFHVKYRARFFHLADLFLSSSHLPAYLVAAFAKR 371

Query:   263 LSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDD-SKAEKE 314
             L+RL++  PP   L+++ LI NLLRRHP+   ++HR  G E   D     EK+
Sbjct:   372 LARLALTAPPEALLMVLPLICNLLRRHPACRVMVHRPQGPELDADPYDPTEKD 424

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0005634 "nucleus" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1RFR4 NOC4L "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 456 (165.6 bits), Expect = 1.3e-53, Sum P(2) = 1.3e-53
 Identities = 87/172 (50%), Positives = 120/172 (69%)

Query:   143 FTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSS 202
             F   W+ FL+  LP+ I K+VLV +H +++P L+ P ++ DFLTR+YDIGG +S++AL+ 
Sbjct:   252 FQVMWLGFLKHQLPLRICKKVLVIMHDSILPHLAQPTLMIDFLTRAYDIGGAISLLALNG 311

Query:   203 LFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKK 262
             LFIL+ +H LEYP+FY KLY+LL PS+F  K+RA+FF L D  L S  LPAYL AAF K+
Sbjct:   312 LFILIHKHNLEYPDFYRKLYSLLDPSVFHVKYRARFFHLADLFLSSSHLPAYLVAAFAKR 371

Query:   263 LSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKE 314
             L+RL++  PP   L+++  I NLLRRHP+   L+HR  G E   D    E+E
Sbjct:   372 LARLALTAPPEALLMVLPFICNLLRRHPACRVLVHRPRGPELDADPYDPEEE 423

GO:0042254 "ribosome biogenesis" evidence=IEA

RGD|1310661 Noc4l "nucleolar complex associated 4 homolog (S. cerevisiae)" [Rattus norvegicus (taxid:10116)]

 Score = 451 (163.8 bits), Expect = 1.6e-53, Sum P(2) = 1.6e-53
 Identities = 84/173 (48%), Positives = 121/173 (69%)

Query:   143 FTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSS 202
             F + W+ FL+  LP+ +YK+VLV +H +++P L+ P ++ DFLT + D+GG +S++AL+ 
Sbjct:   252 FQEMWLGFLKHKLPLSLYKKVLVAMHDSILPHLAQPTLMIDFLTSACDVGGAISLLALNG 311

Query:   203 LFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKK 262
             LFIL+ +H LEYP+FY++LY LL PSIF  K+RA+FF L D  L S  LPAYL AAF K+
Sbjct:   312 LFILIHKHNLEYPDFYQRLYGLLDPSIFHVKYRARFFHLADLFLSSSHLPAYLVAAFAKR 371

Query:   263 LSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDD-SKAEKE 314
             L+RL++  PP   L+++ LI NLLRRHP+   ++HR  G E   D     EK+
Sbjct:   372 LARLALTAPPEALLMVLPLICNLLRRHPACRVMVHRPQGPELDADPYDPTEKD 424

GO:0005730 "nucleolus" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0031965 "nuclear membrane" evidence=IEA

GO:0042254 "ribosome biogenesis" evidence=IEA

ZFIN|ZDB-GENE-050522-98 noc4l "nucleolar complex associated 4 homolog (S. cerevisiae)" [Danio rerio (taxid:7955)]

 Score = 440 (159.9 bits), Expect = 2.6e-51, Sum P(2) = 2.6e-51
 Identities = 82/172 (47%), Positives = 119/172 (69%)

Query:   143 FTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSS 202
             F + W+ FLR  LP  +YK++LV LH +++P +S+P ++ DFL+ +YDIGG +S+ AL+ 
Sbjct:   261 FEQMWLLFLRYKLPGSMYKKILVILHESILPQMSDPKLMMDFLSAAYDIGGAISLSALNG 320

Query:   203 LFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKK 262
             LF+ + +H L+YP+FY+KLY LL PSIF  K+RA+FF L +  L S  LP YL AAFVK+
Sbjct:   321 LFVPIHEHNLDYPDFYKKLYNLLDPSIFHVKYRARFFHLANIFLSSTHLPVYLVAAFVKR 380

Query:   263 LSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKE 314
             L+RLS+  PP+  L+++  I NL+RRHPS   L+HR    +   DD    +E
Sbjct:   381 LARLSLTAPPTALLILLPFICNLIRRHPSCRVLIHRPSAADEPCDDPYVMEE 432

GO:0042254 "ribosome biogenesis" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0031965 "nuclear membrane" evidence=IEA

CGD|CAL0002495 NOC4 [Candida albicans (taxid:5476)]

 Score = 383 (139.9 bits), Expect = 2.5e-47, Sum P(2) = 2.5e-47
 Identities = 76/174 (43%), Positives = 112/174 (64%)

Query:   143 FTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGG--VVSVMAL 200
             F K+ I  L  PL  + YK VL  LH+ +IP++S P  L DFLT  YD+    +V ++AL
Sbjct:   291 FQKSVIAMLSYPLLQEQYKSVLTILHKRIIPYMSQPQSLMDFLTDCYDLTDDLIVPILAL 350

Query:   201 SSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFV 260
             +SL+ LM  + LEYP+FY KLY+LL P +   K+R++FF L D  L S  L A L A+F+
Sbjct:   351 NSLYELMKNYNLEYPDFYSKLYSLLTPELLYTKYRSRFFRLCDLFLSSTHLSANLVASFI 410

Query:   261 KKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKE 314
             KKL+R+S+    SG ++I+  I+NLL+RHP+   +LH+ED    + D   +E++
Sbjct:   411 KKLARISLAASASGVVIIIPFIYNLLKRHPTCMIMLHKEDTESGYQDPFNSEEK 464

GO:0003674 "molecular_function" evidence=ND

GO:0035690 "cellular response to drug" evidence=IMP

GO:0030692 "Noc4p-Nop14p complex" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0032040 "small-subunit processome" evidence=IEA

GO:0000472 "endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA

GO:0000447 "endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA

GO:0000480 "endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA

UNIPROTKB|Q59U49 CaO19.1902 "Putative uncharacterized protein" [Candida albicans SC5314 (taxid:237561)]

 Score = 383 (139.9 bits), Expect = 2.5e-47, Sum P(2) = 2.5e-47
 Identities = 76/174 (43%), Positives = 112/174 (64%)

Query:   143 FTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGG--VVSVMAL 200
             F K+ I  L  PL  + YK VL  LH+ +IP++S P  L DFLT  YD+    +V ++AL
Sbjct:   291 FQKSVIAMLSYPLLQEQYKSVLTILHKRIIPYMSQPQSLMDFLTDCYDLTDDLIVPILAL 350

Query:   201 SSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFV 260
             +SL+ LM  + LEYP+FY KLY+LL P +   K+R++FF L D  L S  L A L A+F+
Sbjct:   351 NSLYELMKNYNLEYPDFYSKLYSLLTPELLYTKYRSRFFRLCDLFLSSTHLSANLVASFI 410

Query:   261 KKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKE 314
             KKL+R+S+    SG ++I+  I+NLL+RHP+   +LH+ED    + D   +E++
Sbjct:   411 KKLARISLAASASGVVIIIPFIYNLLKRHPTCMIMLHKEDTESGYQDPFNSEEK 464

GO:0003674 "molecular_function" evidence=ND

GO:0035690 "cellular response to drug" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	gw1.IX.175.1	hypothetical protein (575 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	gw1.X.2964.1	hypothetical protein (516 aa)				•	•		•		0.653
	estExt_fgenesh4_pm.C_280108	hypothetical protein (960 aa)				•	•		•		0.624
	eugene3.00640202	hypothetical protein (1181 aa)				•	•		•		0.577
	eugene3.00160311	hypothetical protein (691 aa)				•	•		•		0.554
	estExt_Genewise1_v1.C_LG_VII2715	hypothetical protein (380 aa)				•	•		•		0.544
	gw1.86.17.1	hypothetical protein (573 aa)				•					0.509
	estExt_Genewise1_v1.C_LG_IV0024	SubName- Full=Putative uncharacterized protein; (604 aa)				•					0.472
	gw1.I.4832.1	hypothetical protein (422 aa)				•					0.470
	estExt_fgenesh4_pg.C_LG_XV0629	hypothetical protein (314 aa)				•					0.470
	grail3.0101007501	hypothetical protein (229 aa)				•	•		•		0.463

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	470
pfam03914	151	pfam03914, CBF, CBF/Mak21 family	1e-51
COG5117	657	COG5117, NOC3, Protein involved in the nuclear exp	0.002

>gnl|CDD|217788 pfam03914, CBF, CBF/Mak21 family

 Score =  171 bits (435), Expect = 1e-51
 Identities = 67/176 (38%), Positives = 97/176 (55%), Gaps = 27/176 (15%)

Query: 195 VSVMALSSLFILMTQHGLEYPNFYEKLYALLVPSIFMAKHRAK-FFELLDSCLRSPLLPA 253
            S++AL  LF LM+ H L+   FY KLY LL+  +  + ++++ F  LLD  L+S  LPA
Sbjct: 1   TSILALFLLFQLMSGHNLDLDRFYRKLYRLLLDKLLHSSYKSRLFLRLLDKALKSDHLPA 60

Query: 254 YLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEK 313
              AAFVK+L +L++  PPS AL I+ LI NLL+RHP++  LLH E+             
Sbjct: 61  QRVAAFVKRLLQLALHAPPSFALGILPLIRNLLKRHPNLKSLLHTEERGG---------- 110

Query: 314 EIVDAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFV 369
                               +D EE +P  SNA+ SSLWE++ L++HY P V++  
Sbjct: 111 ----------------EDGPYDPEERDPEYSNALNSSLWELELLQNHYHPSVAKLA 150

Length = 151

>gnl|CDD|227447 COG5117, NOC3, Protein involved in the nuclear export of pre-ribosomes [Translation, ribosomal structure and biogenesis / Intracellular trafficking and secretion]

 Score = 40.4 bits (94), Expect = 0.002
 Identities = 25/117 (21%), Positives = 36/117 (30%), Gaps = 27/117 (23%)

Query: 256 AAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEI 315
              F K+L       P      I+ +   L  R+   + L   E                
Sbjct: 562 HVIFKKRLLYCCSRSPEEFKGAILDISAKLDIRYSDCSNLKCSEF--------------- 606

Query: 316 VDAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSL 372
                         G  + D   SNP  SN+  + L+E   L+ HY P VS+    L
Sbjct: 607 ------------DIGAGNVDSIPSNPDLSNSSTAVLFEYFLLKQHYSPAVSQSAKEL 651

Length = 657

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	470
KOG2154	505	consensus Predicted nucleolar protein involved in	100.0
KOG2038	988	consensus CAATT-binding transcription factor/60S r	100.0
PF03914	164	CBF: CBF/Mak21 family; InterPro: IPR005612 This do	100.0
COG5593	821	Nucleic-acid-binding protein possibly involved in	99.98
COG5117	657	NOC3 Protein involved in the nuclear export of pre	99.86
KOG2153	704	consensus Protein involved in the nuclear export o	99.74
KOG2153	704	consensus Protein involved in the nuclear export o	98.0

>KOG2154 consensus Predicted nucleolar protein involved in ribosome biogenesis [Translation, ribosomal structure and biogenesis]

Probab=100.00  E-value=2.6e-68  Score=547.59  Aligned_cols=266  Identities=43%  Similarity=0.735  Sum_probs=251.3

Q ss_pred             CcHHHHHHHHHHHHHHHHHHhccCCCChhhHHHHHHHhhhhhccccCChhhHhhHHHHhhh-cCcchHHHHHHHHHHHHH
Q 012150          130 LSAAIISKKMKSKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYD-IGGVVSVMALSSLFILMT  208 (470)
Q Consensus       130 ~~~~~~~~~~k~~~~~awL~~L~~al~~~l~k~vL~~L~k~I~pHl~NP~lL~DFLtd~~d-~gg~isllAL~~LF~L~~  208 (470)
                      ++.+...++.|+.|+.+|+++++..+|..+++++|.+++++|+||+..|..+|||||++|| .||++||+||+|||+||+
T Consensus       226 p~~~~~~~~~~k~f~~~Wls~l~~~ls~~lykkil~vih~rvip~l~~P~kl~DFLtdsyd~~~g~vslLALngLF~Lm~  305 (505)
T KOG2154|consen  226 PKQTENEKQIRKSFQNMWLSSLNGELSLKLYKKILLVIHKRVIPHLISPTKLMDFLTDSYDDIGGVVSLLALNGLFILMT  305 (505)
T ss_pred             ccccccHHHHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHhHhhcChHHHHHHHHHHHhccCCchhHHHHhHHHHHHH
Confidence            4556677888999999999999999999999999999999999999999999999999999 899999999999999999


Q ss_pred             hcCCCcchHHHHHHHhhCcCcccchhHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHh
Q 012150          209 QHGLEYPNFYEKLYALLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRR  288 (470)
Q Consensus       209 ~~Nld~prFY~~LY~LLdP~l~~sk~ra~Fl~LL~~~Lks~~Lp~~rVAAFIKRLlrlaL~aPp~~~~~iL~lI~nLLkr  288 (470)
                      +||++||.||.+||+||+|++||.|||+|||+|+|.||+|+|||+++||||+|||+|+||.+||.+++.+|+||+||++|
T Consensus       306 khNleYP~FY~KLY~Ll~Pslfh~KyRarff~L~D~FLSSTHLpa~LvAsFlKrLaRlaL~APpeA~~~vipfI~Nll~r  385 (505)
T KOG2154|consen  306 KHNLEYPDFYEKLYALLNPSLFHVKYRARFFRLADLFLSSTHLPAYLVASFLKRLARLALEAPPEAIVIVIPFICNLLRR  385 (505)
T ss_pred             HcCCCCchHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHhccCCcccchhhHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccccccccccCCCCCCCCCchhHHHHHHhhhhhcccCCCCCCCCCCCCCCCCcCCCCCcchHHHHHHHhhccChHHHHH
Q 012150          289 HPSINCLLHREDGNETHNDDSKAEKEIVDAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRF  368 (470)
Q Consensus       289 hP~l~~Ll~~~~~~~~~~~~~~~ege~~d~~~~~~~~~~~~~~d~Ydp~~rDP~~~nA~~SsLWEL~~L~~HYHPsVa~~  368 (470)
                      ||+|+.|+|++...+                         ...||||+.+.||.+++|++||||||.+||.||||+|+..
T Consensus       386 Hp~c~~lvhr~~~~~-------------------------~~~Dpfd~~EtDP~ks~ALeSSLWEL~~Lq~Hy~p~Va~~  440 (505)
T KOG2154|consen  386 HPNCQPLVHRSHALS-------------------------LYDDPFDNDETDPKKSGALESSLWELELLQTHYHPEVAKA  440 (505)
T ss_pred             CCchhhhhccccccc-------------------------CCCCCCCCCCCChhhhhhHHHHHHHHHHHHHhhcHHHHHH
Confidence            999999999987632                         2349999999999999999999999999999999999999


Q ss_pred             HHHhhhcccccccccccccCcCCCCcHHHHHHHHHhccCCCCCcccccCCCCCCCCC
Q 012150          369 VLSLENDLTVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQVPLAFYKTTPTSLFSD  425 (470)
Q Consensus       369 A~~l~~~~~i~~k~~~y~~edflD~sy~~lld~e~~k~~k~~p~~~~~~~p~~lf~~  425 (470)
                      |+.+.+++++    ++|+++|++|++|..++|+|++|+.|..|-.+|+ -++++++.
T Consensus       441 A~~~~q~~~k----~ef~~ed~ld~~y~~l~d~el~~kgk~~p~lefe-~~t~~~g~  492 (505)
T KOG2154|consen  441 ASFFNQSLYK----PEFGLEDGLDSKYSVLQDGELSRKGKRFPPLEFE-RRTGLGGR  492 (505)
T ss_pred             HHHHhccCcc----ccccCcchhhhhhHHhhcchhhcccCCCCCcccc-cccccCCc
Confidence            9999998875    6899999999999999999999999966666665 36888876

>KOG2038 consensus CAATT-binding transcription factor/60S ribosomal subunit biogenesis protein [Translation, ribosomal structure and biogenesis; Transcription]

Probab=100.00  E-value=2.7e-49  Score=423.93  Aligned_cols=254  Identities=26%  Similarity=0.372  Sum_probs=219.9

Q ss_pred             HHHHHHHHHHHHhccCCCC-----hhhHHHHHHHhhhhhccccCChhhHhhHHHHhhhcCcchHHHHHHHHHHHHHhcCC
Q 012150          138 KMKSKFTKAWITFLRLPLP-----VDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSSLFILMTQHGL  212 (470)
Q Consensus       138 ~~k~~~~~awL~~L~~al~-----~~l~k~vL~~L~k~I~pHl~NP~lL~DFLtd~~d~gg~isllAL~~LF~L~~~~Nl  212 (470)
                      +..+++.+|.|||+|||+|     .+.+..++..|++  +.|.+|      |+|         |||||++|||++....+
T Consensus       468 e~nsrllSAlLTGvNRAfPfaq~~ddk~~~~~~tLFk--l~HssN------FNT---------sVQaLmLlfQvs~~~~~  530 (988)
T KOG2038|consen  468 ELNSRLLSALLTGVNRAFPFAQTADDKLEEQMKTLFK--LTHSSN------FNT---------SVQALMLLFQVSKKNDY  530 (988)
T ss_pred             hhhHHHHHHHHhcccccCCcccCchHHHHHHhHHHHH--HHhhcc------cch---------hHHHHHHHHHHHHhhhh
Confidence            4588999999999999987     5689999999999  999999      997         99999999999999999


Q ss_pred             CcchHHHHHHH-hhCcCcccchhHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHhCcc
Q 012150          213 EYPNFYEKLYA-LLVPSIFMAKHRAKFFELLDSCLRSPLLPAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPS  291 (470)
Q Consensus       213 d~prFY~~LY~-LLdP~l~~sk~ra~Fl~LL~~~Lks~~Lp~~rVAAFIKRLlrlaL~aPp~~~~~iL~lI~nLLkrhP~  291 (470)
                      .++|||++||+ ||||+++.++++++|++||+++|+.|. ++.||+||||||+|+|++++|+++||+|.++++|++..|.
T Consensus       531 vSDRyY~aLY~kLLdP~l~~sSKq~m~LnLlykslK~D~-ni~RV~AFvKRlLQVa~~q~P~~i~G~l~Llsel~Karp~  609 (988)
T KOG2038|consen  531 VSDRYYRALYRKLLDPRLMNSSKQAMFLNLLYKSLKEDI-NIQRVRAFVKRLLQVAVQQQPPFICGILFLLSELLKARPT  609 (988)
T ss_pred             hHHHHHHHHHHHhcCcccCchHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHHHhcCCchhHhHHHHHHHHHHhcch
Confidence            99999999999 999999999999999999999999997 9999999999999999999999999999999999999999


Q ss_pred             ccccccccCCCCCCC--------CCch--------hHHHHHH---------hhh-----hhc-------ccCCCCCCCCC
Q 012150          292 INCLLHREDGNETHN--------DDSK--------AEKEIVD---------AAT-----VAN-------ISSIKPGIDHF  334 (470)
Q Consensus       292 l~~Ll~~~~~~~~~~--------~~~~--------~ege~~d---------~~~-----~~~-------~~~~~~~~d~Y  334 (470)
                      ++.|+.+.+..+.+.        ++.+        .+|..++         +..     ...       .-..+...++|
T Consensus       610 l~~lv~~~~~~D~e~dv~~~~e~DD~deek~vd~Dke~~~vdk~~~e~~~~e~ds~s~k~E~~~~~~~d~~~~~~~~~~Y  689 (988)
T KOG2038|consen  610 LRKLVVNSEDIDPEEDVVAQMENDDVDEEKKVDLDKEGKEVDKNGVEEEVEEEDSVSEKKEDLDKKKVDPIGARGAKTPY  689 (988)
T ss_pred             HHHHhhCCcccChhhhhhhhhcccccchhhhccccccceeecccccccccccccccccchhhhhhhhccccccccCCCCC
Confidence            999987655432211        0111        1111110         000     000       01123456799


Q ss_pred             CCCCCCCcCCCCCcchHHHHHHHhhccChHHHHHHHHhhhcccccccccccccCcCCCCcHHHHHHHHHhccCCCCCccc
Q 012150          335 DDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDLTVRAKTTEINVKDFCSGSYATIFGEEIRRRVKQVPLAF  414 (470)
Q Consensus       335 dp~~rDP~~~nA~~SsLWEL~~L~~HYHPsVa~~A~~l~~~~~i~~k~~~y~~edflD~sy~~lld~e~~k~~k~~p~~~  414 (470)
                      ||.+|||.+|||..||||||..|.+||||+|+.||+.|.+|..|+     |+++|+.|||+++||||++.|.+|++.-+.
T Consensus       690 D~r~R~P~f~nAd~tslWEl~~ls~HfHPSVa~~Akall~G~~i~-----y~g~~L~dfTL~~FLDrF~yRnPK~~t~~~  764 (988)
T KOG2038|consen  690 DPRKRNPLFCNADHTSLWELLLLSKHFHPSVATFAKALLEGEEIQ-----YGGPPLNDFTLMAFLDRFAYRNPKQVTKAR  764 (988)
T ss_pred             CcccCCccccCCccchHHHHHHHhhhcCchHHHHHHHHhcCceee-----cCCCchhHHHHHHHHHHHHhcCcccccccC
Confidence            999999999999999999999999999999999999999999986     999999999999999999999999887654

>PF03914 CBF: CBF/Mak21 family; InterPro: IPR005612 This domain is present in the CAATT-binding protein which is essential for growth and necessary for 60S ribosomal subunit biogenesis

Probab=100.00  E-value=1.7e-40  Score=306.71  Aligned_cols=162  Identities=41%  Similarity=0.702  Sum_probs=143.3

Q ss_pred             hHHHHHHHHHHHHHhcCCCcchHHHHHHHhh-CcCcccchhH-HHHHHHHHHHhcCCCChHHHHHHHHHHHHHHhccCCh
Q 012150          195 VSVMALSSLFILMTQHGLEYPNFYEKLYALL-VPSIFMAKHR-AKFFELLDSCLRSPLLPAYLAAAFVKKLSRLSILVPP  272 (470)
Q Consensus       195 isllAL~~LF~L~~~~Nld~prFY~~LY~LL-dP~l~~sk~r-a~Fl~LL~~~Lks~~Lp~~rVAAFIKRLlrlaL~aPp  272 (470)
                      ++|+||.++|+|++++|+|+++||++||++| +|..++++++ .+||++++++|+++++|..|||||||||+|+|+++||
T Consensus         1 ~~i~al~~l~~l~~~~n~d~~~FY~~LY~~L~~p~~~~~~~~~~~~l~lL~~~l~~~~~~~~rvaAFiKRLl~~sl~~~~   80 (164)
T PF03914_consen    1 TCIQALFLLFQLLSGQNIDLDRFYRALYSLLLDPELFSSSDKSALLLNLLDKSLKSDHLPIQRVAAFIKRLLQLSLHLPP   80 (164)
T ss_pred             CHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHcchhhccccchHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHHcCCH
Confidence            4899999999999999999999999999966 9999998865 5599999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCccccccccccCCCCCCCCCchhHHHHHHhhhhhcccCCCCCCCCCCCCCCCCcCCCCCcchHH
Q 012150          273 SGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIVDAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLW  352 (470)
Q Consensus       273 ~~~~~iL~lI~nLLkrhP~l~~Ll~~~~~~~~~~~~~~~ege~~d~~~~~~~~~~~~~~d~Ydp~~rDP~~~nA~~SsLW  352 (470)
                      ++++++|.+|++|+++||.|+.|+++++...+  .+.+++++            .....++|+|+++||++|||..|+||
T Consensus        81 ~~~~~~L~~i~~ll~~~p~l~~ll~~~~~~~~--~~~~~~~~------------~~~~~~~Y~p~~~dP~~~~a~~s~lW  146 (164)
T PF03914_consen   81 SFALAILALIRKLLKRHPNLKSLLDNEEKKAD--SGSEEEDE------------EDKSEDKYDPEKRDPEFSNALASSLW  146 (164)
T ss_pred             HHHHHHHHHHHHHHHHCHHHHHHhcCCccccc--cchhhccc------------ccccccccCcCCCCHhHcCCchhHHH
Confidence            99999999999999999999999988775321  01111111            12355799999999999999999999


Q ss_pred             HHHHHhhccChHHHHHHH
Q 012150          353 EIDTLRHHYCPPVSRFVL  370 (470)
Q Consensus       353 EL~~L~~HYHPsVa~~A~  370 (470)
                      ||.+|++||||+|+.+|+
T Consensus       147 EL~lL~~H~hP~V~~~A~  164 (164)
T PF03914_consen  147 ELNLLRNHYHPSVRQFAR  164 (164)
T ss_pred             HHHHHHHCCCcHHHHHhC
Confidence            999999999999999985

Other proteins containing this domain stimulate transcription from the HSP70 promoter.

>COG5593 Nucleic-acid-binding protein possibly involved in ribosomal biogenesis [Translation, ribosomal structure and biogenesis]

Probab=99.98  E-value=6.9e-32  Score=281.63  Aligned_cols=342  Identities=21%  Similarity=0.211  Sum_probs=248.1

Q ss_pred             HHHHHHHHhhhhh--------ccchHHHHHHHHHhhcCCCCCCCCCCCCCCcccCchhhHHHHHHHHHHHHHhCC-CCCC
Q 012150           14 GSVTDFLASKYFN--------YFTYISMEKLARSLEGKGISDDKTGSADENSESHSRASIELSLRKSYYILSKIP-SMED   84 (470)
Q Consensus        14 ~~~~~~~~~~y~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~l~~~~-~~~~   84 (470)
                      ..+++..+.-||+        ||+.+++....-+..+++..                   ..+++.+|.++..|. .+|+
T Consensus       264 ~VV~d~Iedf~f~pn~~~~s~yyalitLnqt~l~~~e~~va-------------------n~lv~vyf~~f~kfl~n~~k  324 (821)
T COG5593         264 EVVLDGIEDFYFKPNDLFRSRYYALITLNQTELENREKAVA-------------------NKLVKVYFSIFRKFLENIPK  324 (821)
T ss_pred             HHHHhhhhHheeccccccceeeeeehhhHHHHHhhhHHHHH-------------------HHHHHHHHHHHHHHHhcCch
Confidence            3466677888888        99999998776554432211                   355777777776665 3332


Q ss_pred             CcchhhhhcccccCCCCcccchHHhhhhhhccccCcchhhccCCcCcHHHHHHHHHHHHHHHHHHhccCCCC-----hhh
Q 012150           85 NNEKSEHEMWSGSGSSSEEGNLKEASKKSKTKVKMPKAEKSNNNALSAAIISKKMKSKFTKAWITFLRLPLP-----VDI  159 (470)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~awL~~L~~al~-----~~l  159 (470)
                      ..  .        +   +...+++..+++-.+.+  .+++....-.-..+...+..+++.++.|+|+||+.|     ...
T Consensus       325 e~--~--------~---~s~~leek~~~~~~Knk--~s~K~~k~e~~rkev~~eknS~~~savLtG~nRa~pfa~l~~~~  389 (821)
T COG5593         325 EH--R--------V---NSNILEEKLVIGLGKNK--GSEKICKTEIIRKEVHTEKNSFYGSAVLTGCNRAGPFALLFRNA  389 (821)
T ss_pred             hh--c--------c---cchhHHHHHHhhhccCC--CCcccccHHHHHHHHHHhhhhHHHHHHHhcccccCchhhhhHHH
Confidence            11  0        0   11223333322211111  111111111111222334578899999999999865     678


Q ss_pred             HHHHHHHhhhhhccccCChhhHhhHHHHhhhcCcchHHHHHHHHHHHHHhcCCCcchHHHHHHH-hhCcCcccchhHHHH
Q 012150          160 YKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEKLYA-LLVPSIFMAKHRAKF  238 (470)
Q Consensus       160 ~k~vL~~L~k~I~pHl~NP~lL~DFLtd~~d~gg~isllAL~~LF~L~~~~Nld~prFY~~LY~-LLdP~l~~sk~ra~F  238 (470)
                      ++.++.+|++  +.|-.+      |+|         ++|||++++|..-+.-++++|||+.||. |+||.+..++++..+
T Consensus       390 ~~~Hm~tlfk--ith~~~------fnt---------s~qalmli~q~~~~~~l~SdryY~~lYesl~dprls~ssKqgiy  452 (821)
T COG5593         390 VKSHMMTLFK--ITHEFL------FNT---------SEQALMLIDQEFYRFLLDSDRYYTPLYESLIDPRLSESSKQGIY  452 (821)
T ss_pred             HHHHHHHHHh--hhhhhh------hhH---------HHHHHHHHHHHHHHHhhccchhhhhHHHHHhhhhhhcccccchh
Confidence            8999999999  999988      886         9999999999999999999999999999 999999999999999


Q ss_pred             HHHHHHHhcCCCChHHHHHHHHHHHHHHhcc-CChhHHHHHHHHHHHHHHhCccccccccccCCCCCCCCCchhHHHHHH
Q 012150          239 FELLDSCLRSPLLPAYLAAAFVKKLSRLSIL-VPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIVD  317 (470)
Q Consensus       239 l~LL~~~Lks~~Lp~~rVAAFIKRLlrlaL~-aPp~~~~~iL~lI~nLLkrhP~l~~Ll~~~~~~~~~~~~~~~ege~~d  317 (470)
                      ++|+++.|+-+. ++.||-||+||++|+|-+ +.++++.+....+.+|-+.-|.++.|+.+.+-+ -+ .+++.+++.. 
T Consensus       453 lnllykSL~vd~-nV~rv~af~kr~lQv~S~w~~~p~~tg~f~~l~ql~~a~~~lk~l~tn~~vd-~e-~e~d~~eeq~-  528 (821)
T COG5593         453 LNLLYKSLRVDT-NVHRVDAFRKRALQVISGWMVLPFDTGDFMSLLQLEMACGDLKNLLTNTPVD-YE-YESDAEEEQG-  528 (821)
T ss_pred             HHHHHHHHHHhc-CchHHHHHHHHHHHHhhccccCCccchHHHHHHHHHHHhHHHHHHhcCCCcc-cc-cccchhhhhc-
Confidence            999999999998 899999999999999755 456788888889999999999999999876542 11 1111111110 


Q ss_pred             hhhhhcccCCCCCCCCCCCCCCCCcCCCCCcchHHHHHHHhhccChHHHHHHHHhhhcccccccccccccCcCCCCcHHH
Q 012150          318 AATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLENDLTVRAKTTEINVKDFCSGSYAT  397 (470)
Q Consensus       318 ~~~~~~~~~~~~~~d~Ydp~~rDP~~~nA~~SsLWEL~~L~~HYHPsVa~~A~~l~~~~~i~~k~~~y~~edflD~sy~~  397 (470)
                           .   +.+....||..+|||.++||..||||||..+.+||||+|..+|+.+..|..+-.|      -|+-=||+..
T Consensus       529 -----d---kd~krkeydgrkrdpk~anae~s~lwei~~finhfhptv~~~a~a~v~ge~~i~k------p~l~l~tl~h  594 (821)
T COG5593         529 -----D---KDIKRKEYDGRKRDPKFANAEKSSLWEINNFINHFHPTVKTYANAYVTGEEQIAK------PDLGLFTLSH  594 (821)
T ss_pred             -----c---cchhhhhccCcccCcccccccccchhhhhhhhhhcccHHHHHHHHhhhhhhhhcC------CCcchhhHHH
Confidence                 0   1122346999999999999999999999999999999999999999988864222      2344489999


Q ss_pred             HHHHHHhccCCCCCcccccCCCCCCCC
Q 012150          398 IFGEEIRRRVKQVPLAFYKTTPTSLFS  424 (470)
Q Consensus       398 lld~e~~k~~k~~p~~~~~~~p~~lf~  424 (470)
                      |||+++.|..|+-..+--..|=.-||+
T Consensus       595 fldrf~yr~~kqt~~arg~simqpl~~  621 (821)
T COG5593         595 FLDRFVYRSAKQTNTARGTSIMQPLFS  621 (821)
T ss_pred             HHHHHHhcCcccccccccchhhhhhhc
Confidence            999999999988766543333333443

>COG5117 NOC3 Protein involved in the nuclear export of pre-ribosomes [Translation, ribosomal structure and biogenesis / Intracellular trafficking and secretion]

Probab=99.86  E-value=1.3e-20  Score=195.09  Aligned_cols=205  Identities=20%  Similarity=0.251  Sum_probs=173.2

Q ss_pred             HHHHHHHHHhccCCCChhhHHHHHHHhhhhhccccCChhhHhhHHHHhhhc---------Cc---chHHHHHHHHHHHHH
Q 012150          141 SKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDI---------GG---VVSVMALSSLFILMT  208 (470)
Q Consensus       141 ~~~~~awL~~L~~al~~~l~k~vL~~L~k~I~pHl~NP~lL~DFLtd~~d~---------gg---~isllAL~~LF~L~~  208 (470)
                      +..+..||.+|+. --.++++.||+||.|  +.|+.||++|+|||..+|.+         |.   .-+++|+.+.|.|++
T Consensus       406 kiif~~Yf~vLk~-~~k~lig~vleGl~k--~~~~~n~eflGD~Levl~eL~~d~~~dk~ss~a~r~alLcI~tAF~i~S  482 (657)
T COG5117         406 KIIFRLYFMVLKG-DRKDLIGYVLEGLVK--YRKIINPEFLGDLLEVLYELLNDNPLDKISSDARRQALLCILTAFEIAS  482 (657)
T ss_pred             HHHHHHHHHHHhc-chHHHHHHHHHHHHH--HHhhcCHHHHhHHHHHHHHHHcCCchhhhhHHHHHHHHHHhhHHHHHhh
Confidence            4455566777753 335799999999999  99999999999999998853         11   358899999999986


Q ss_pred             h-----cCCCcchHHHHHHHhhCc-----Cccc---------------------chhHHHHHHHHHH-HhcCCCChHHHH
Q 012150          209 Q-----HGLEYPNFYEKLYALLVP-----SIFM---------------------AKHRAKFFELLDS-CLRSPLLPAYLA  256 (470)
Q Consensus       209 ~-----~Nld~prFY~~LY~LLdP-----~l~~---------------------sk~ra~Fl~LL~~-~Lks~~Lp~~rV  256 (470)
                      .     .|+|.+.|-..||+++.|     ++--                     +....+++..++. |+++......|.
T Consensus       483 ~t~ygk~n~Dl~~fVd~lY~~v~p~~l~pD~dLn~k~~RL~DP~~~~~~~~VN~tt~~e~LlK~~~~~Ffksk~~~~~r~  562 (657)
T COG5117         483 ATLYGKENYDLGGFVDLLYSMVHPMNLEPDADLNLKIKRLKDPDAPSKPFVVNATTDNEELLKIVRLLFFKSKQPVHRRH  562 (657)
T ss_pred             hhhhhhccccHHHHHHHHHHHhCcccCCcchhhhhhhhhhcCCcccccCccccccccHHHHHHHHHHHheeccCchHHHH
Confidence            5     589999999999997644     2210                     1233567777654 678998888999


Q ss_pred             HHHHHHHHHHhccCChhHHHHHHHHHHHHHHhCccccccccccCCCCCCCCCchhHHHHHHhhhhhcccCCCCCCCCCCC
Q 012150          257 AAFVKKLSRLSILVPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIVDAATVANISSIKPGIDHFDD  336 (470)
Q Consensus       257 AAFIKRLlrlaL~aPp~~~~~iL~lI~nLLkrhP~l~~Ll~~~~~~~~~~~~~~~ege~~d~~~~~~~~~~~~~~d~Ydp  336 (470)
                      .+|-|||+-.|.+.|..+..++|.++..|+.|+|.|..+..++.+                           .|.|.|+|
T Consensus       563 ~~f~krl~~c~s~~pe~~~~ail~~~~kl~~rys~~s~l~~sE~~---------------------------ig~g~~~~  615 (657)
T COG5117         563 VIFKKRLLYCCSRSPEEFKGAILDISAKLDIRYSDCSNLKCSEFD---------------------------IGAGNVDS  615 (657)
T ss_pred             HHHHHHHHHHHccChHHHHHHHHHHHHHHHhhhhhccCccCchhh---------------------------cCCccccc
Confidence            999999999999999999999999999999999999999988765                           37799999


Q ss_pred             CCCCCcCCCCCcchHHHHHHHhhccChHHHHHHHHhhhc
Q 012150          337 EESNPVKSNAMRSSLWEIDTLRHHYCPPVSRFVLSLEND  375 (470)
Q Consensus       337 ~~rDP~~~nA~~SsLWEL~~L~~HYHPsVa~~A~~l~~~  375 (470)
                      ...||..+|...+.|||-.+|.+||+|.|++-|+.++..
T Consensus       616 ~~~nP~~SN~~tA~l~e~fLlk~hy~P~Vsq~~k~L~~~  654 (657)
T COG5117         616 IPSNPDLSNSSTAVLFEYFLLKQHYSPAVSQSAKELLKS  654 (657)
T ss_pred             CCCCcccCCchhHHHHHHHHHHhhcCHHhHHHHHHHHhh
Confidence            999999999999999999999999999999999998763

>KOG2153 consensus Protein involved in the nuclear export of pre-ribosomes [Translation, ribosomal structure and biogenesis; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.74  E-value=2.6e-17  Score=176.58  Aligned_cols=214  Identities=18%  Similarity=0.200  Sum_probs=165.0

Q ss_pred             HHHHHHHHHhccCCCChhhHHHHHHHhhhhhccccCChhhHhhHHHHhhhc------CcchHHHHHHHHHHHHHh----c
Q 012150          141 SKFTKAWITFLRLPLPVDIYKEVLVTLHRAVIPFLSNPIMLCDFLTRSYDI------GGVVSVMALSSLFILMTQ----H  210 (470)
Q Consensus       141 ~~~~~awL~~L~~al~~~l~k~vL~~L~k~I~pHl~NP~lL~DFLtd~~d~------gg~isllAL~~LF~L~~~----~  210 (470)
                      +..+..|+.+|+...-. ++..+|+||++  +.|++|++++.|++...-.+      +...+++|++++|.|++.    .
T Consensus       459 kiVFtiYFrILkn~~~t-ll~~vlEGlak--f~h~invef~~dll~vlk~ll~d~~~~~re~l~cvqtaf~IlS~qg~~l  535 (704)
T KOG2153|consen  459 KIVFTIYFRILKNDRYT-LLGAVLEGLAK--FAHLINVEFLGDLLKVLKELLEDIELSYREALLCVQTAFCILSGQGEKL  535 (704)
T ss_pred             HHHHHHHHHHHhcchhh-HHHHHHhhHHH--HhhhccHHHhhhHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhccceee
Confidence            34455788888866555 99999999999  99999999999998754432      345789999999999986    4


Q ss_pred             CCCcchHHHHHHHhhCcCcccch--hHHHHHHHHHHHh-cCCCChHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHH
Q 012150          211 GLEYPNFYEKLYALLVPSIFMAK--HRAKFFELLDSCL-RSPLLPAYLAAAFVKKLSRLSILVPPSGALVIMALIHNLLR  287 (470)
Q Consensus       211 Nld~prFY~~LY~LLdP~l~~sk--~ra~Fl~LL~~~L-ks~~Lp~~rVAAFIKRLlrlaL~aPp~~~~~iL~lI~nLLk  287 (470)
                      |+|+..||..||+++-|--....  --.+.++++|..+ ++.. |..+|.+|++||+.+++|.-+...+    .+...+.
T Consensus       536 niD~~~fv~~lY~~l~~~~~~~~~~~~~~ilr~~d~~~~k~r~-~v~~~~~~~~~Ll~~~~h~~~~s~~----~s~~~~~  610 (704)
T KOG2153|consen  536 NIDLGKFVDHLYKMLFPMNLGPDDDGFAIILRLLDPLLIKIRK-PVVNVITKMERLLKCSLHVFFNSKL----ISKYRDI  610 (704)
T ss_pred             ccCHHHHHHHHHHHhcccccCCCcchHHHHHHHhhHhhhhhhh-hHHHHHHHHHHHHHHHHHHhhcccc----hHHHHHH
Confidence            88999999999997766333222  2357899999875 5565 8888999999999999998776555    4555566


Q ss_pred             hCccccccccccCCCCCCCCCchhHHHHHHhhhhhcccCCCCCCCCCCCCCCCCcCCCCCcchHHHHHHHhhccChHHHH
Q 012150          288 RHPSINCLLHREDGNETHNDDSKAEKEIVDAATVANISSIKPGIDHFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVSR  367 (470)
Q Consensus       288 rhP~l~~Ll~~~~~~~~~~~~~~~ege~~d~~~~~~~~~~~~~~d~Ydp~~rDP~~~nA~~SsLWEL~~L~~HYHPsVa~  367 (470)
                      ..+.|..|+.++                                        -|++|++....|||+.+++  |||.|+.
T Consensus       611 ~fsk~~~~~~~~----------------------------------------~pe~~s~a~~al~e~~l~r--y~~~~~~  648 (704)
T KOG2153|consen  611 EFSKRLNLLDSE----------------------------------------TPEYCSIASLALFEKLLLR--YHPISRL  648 (704)
T ss_pred             Hhhhhhhhhhcc----------------------------------------CccccccccHHHHHHHHHh--cchHHHH
Confidence            666666555432                                        1999999999999999999  9999999


Q ss_pred             HHHHhhhcccccccccccccCcCCCCcHHHHHHHHHhcc
Q 012150          368 FVLSLENDLTVRAKTTEINVKDFCSGSYATIFGEEIRRR  406 (470)
Q Consensus       368 ~A~~l~~~~~i~~k~~~y~~edflD~sy~~lld~e~~k~  406 (470)
                      ||..+.-|.+.-  +..-.--++...|-+.+++..+-..
T Consensus       649 ~a~~~~~G~~~~--~~~a~~p~~s~~sa~~L~~~~~~~~  685 (704)
T KOG2153|consen  649 MASEIAIGVGAT--GEGALPPELSNLSAAELFEQDLLEM  685 (704)
T ss_pred             HHHHHhhcCCcc--CcCCCCccccCchHHHHhhhHHHHh
Confidence            999998888762  1122223455578888999877655

>KOG2153 consensus Protein involved in the nuclear export of pre-ribosomes [Translation, ribosomal structure and biogenesis; Intracellular trafficking, secretion, and vesicular transport]

Probab=98.00  E-value=1.6e-05  Score=87.02  Aligned_cols=146  Identities=24%  Similarity=0.312  Sum_probs=108.3

Q ss_pred             HHHHHHHHhcCCC--cchHHHHHHHhhCcCcccch--------hHHHHHHHH-HHHhcCCCChHHHHHHHHHHHHHHhcc
Q 012150          201 SSLFILMTQHGLE--YPNFYEKLYALLVPSIFMAK--------HRAKFFELL-DSCLRSPLLPAYLAAAFVKKLSRLSIL  269 (470)
Q Consensus       201 ~~LF~L~~~~Nld--~prFY~~LY~LLdP~l~~sk--------~ra~Fl~LL-~~~Lks~~Lp~~rVAAFIKRLlrlaL~  269 (470)
                      .++|.+|-..+++  -+.||.- -+++||.+....        .+-|++.+. ..+..+.....+|..+|-||+.-++.+
T Consensus       544 ~~lY~~l~~~~~~~~~~~~~~i-lr~~d~~~~k~r~~v~~~~~~~~~Ll~~~~h~~~~s~~~s~~~~~~fsk~~~~~~~~  622 (704)
T KOG2153|consen  544 DHLYKMLFPMNLGPDDDGFAII-LRLLDPLLIKIRKPVVNVITKMERLLKCSLHVFFNSKLISKYRDIEFSKRLNLLDSE  622 (704)
T ss_pred             HHHHHHhcccccCCCcchHHHH-HHHhhHhhhhhhhhHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHhhhhhhhhhcc
Confidence            4455555444444  3345543 345565432211        122333322 334467778999999999999999999


Q ss_pred             CChhHHHHHHHHHHHHHHhCccccccccccCCCCCCCCCchhHHHHHHhhhhhcccCCCCCCCCCCCCCCCCcCCCCCcc
Q 012150          270 VPPSGALVIMALIHNLLRRHPSINCLLHREDGNETHNDDSKAEKEIVDAATVANISSIKPGIDHFDDEESNPVKSNAMRS  349 (470)
Q Consensus       270 aPp~~~~~iL~lI~nLLkrhP~l~~Ll~~~~~~~~~~~~~~~ege~~d~~~~~~~~~~~~~~d~Ydp~~rDP~~~nA~~S  349 (470)
                      .|....++.++|+-.+|-|++.+-.++..+..                           .|.+.|.+...+|+.+|...+
T Consensus       623 ~pe~~s~a~~al~e~~l~ry~~~~~~~a~~~~---------------------------~G~~~~~~~a~~p~~s~~sa~  675 (704)
T KOG2153|consen  623 TPEYCSIASLALFEKLLLRYHPISRLMASEIA---------------------------IGVGATGEGALPPELSNLSAA  675 (704)
T ss_pred             CccccccccHHHHHHHHHhcchHHHHHHHHHh---------------------------hcCCccCcCCCCccccCchHH
Confidence            99999999999999999998887777765543                           477899999999999999999


Q ss_pred             hHHHHHHHhhccChHHHHHHHHhhh
Q 012150          350 SLWEIDTLRHHYCPPVSRFVLSLEN  374 (470)
Q Consensus       350 sLWEL~~L~~HYHPsVa~~A~~l~~  374 (470)
                      .|||-.++..||+|+|..-++.+..
T Consensus       676 ~L~~~~~~~~~~~P~v~~~~kql~~  700 (704)
T KOG2153|consen  676 ELFEQDLLEMHYNPTVPLSLKQLYK  700 (704)
T ss_pred             HHhhhHHHHhccCCCCCchHHHHHH
Confidence            9999999999999999988777654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	470
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 49.5 bits (117), Expect = 2e-06
 Identities = 85/573 (14%), Positives = 158/573 (27%), Gaps = 220/573 (38%)

Query: 54  DENSESHSRASIELSLRKSY-YILSKI------PSMEDNNEKSEHEMWSGSGSSSEEGNL 106
            +  E   +  +E  LR +Y +++S I      PSM       + +          + N+
Sbjct: 73  SKQEEMVQKF-VEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNV 131

Query: 107 --KEASKKSKTKVK------------MPKAEKSNNNALSAAII-SKKMKSKFTKA--WIT 149
              +   K +  +             +  + K+    ++  +  S K++ K      W+ 
Sbjct: 132 SRLQPYLKLRQALLELRPAKNVLIDGVLGSGKT---WVALDVCLSYKVQCKMDFKIFWLN 188

Query: 150 FLRLPLPVDIYKEVLVTLHRAVIPFLSNP------------------------------I 179
                 P  + + +   L++    + S                                +
Sbjct: 189 LKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLL 248

Query: 180 ML---------------CDFL--TRSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEKLY 222
           +L               C  L  TR   +   +S    + + +      L      E   
Sbjct: 249 VLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPD---EVK- 304

Query: 223 ALLVPSIFMAKHRAKFFELLDSCLR------SPLLPAYLAAAF--------------VKK 262
                S+       K+ +     L       +P   + +A +                 K
Sbjct: 305 -----SLL-----LKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDK 354

Query: 263 LSR--------------------LSIL---VP-PSGALV-------------IMALIHN- 284
           L+                     LS+       P+  L              ++  +H  
Sbjct: 355 LTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKY 414

Query: 285 -LLRRHP-----SINCLLHREDGNETHNDDSKA-EKEIVDA----ATVANISSIKPGID- 332
            L+ + P     SI   ++ E   +   ++  A  + IVD      T  +   I P +D 
Sbjct: 415 SLVEKQPKESTISIP-SIYLE--LKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQ 471

Query: 333 --------HFDDEESNPVKSNAMRSSLWEIDTLRHHYCPPVS-RFVLSLENDLTVRAKTT 383
                   H  + E      +  R +L      R  +   +  RF   LE    +R  +T
Sbjct: 472 YFYSHIGHHLKNIE------HPERMTL-----FRMVF---LDFRF---LEQ--KIRHDST 512

Query: 384 EINVKDFCSGSYATIFGEEIRRRVKQVPLAFYKTTPTSLFSDSDFAGWTFICD------K 437
             N     SGS      +          L FYK        D+D      +        K
Sbjct: 513 AWN----ASGSILNTLQQ----------LKFYK----PYICDNDPKYERLVNAILDFLPK 554

Query: 438 TEENSNGNKEKN---FACLSEENGHI--SAKRQ 465
            EEN   +K  +    A L  E+  I   A +Q
Sbjct: 555 IEENLICSKYTDLLRIA-LMAEDEAIFEEAHKQ 586

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.1 bits (98), Expect = 4e-04
 Identities = 62/339 (18%), Positives = 101/339 (29%), Gaps = 113/339 (33%)

Query: 15  SVTDFLASKYFNY---------FT----------YISMEK------------LARSLEGK 43
            VTDFL++    +          T          Y+                   S+  +
Sbjct: 276 QVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAE 335

Query: 44  GISDDKT---GSADENSESHSRASIELSL--------RKSYYILS------KIPSMEDNN 86
            I D           N +  +   IE SL        RK +  LS       IP      
Sbjct: 336 SIRDGLATWDNWKHVNCDKLTTI-IESSLNVLEPAEYRKMFDRLSVFPPSAHIP------ 388

Query: 87  EKSEHEMWSGSGSSSEEGNLKEASKKS-------KTKVKMP------KAEKSNNNALSAA 133
                 +W     S     + +  K S       ++ + +P      K +  N  AL  +
Sbjct: 389 TILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRS 448

Query: 134 IISKKMKSKFTKAWITFLRLPLPVDIY-------------KEVLVTLHRAVIPFLSNPIM 180
           I+         K + +   +P  +D Y                 +TL R V  FL     
Sbjct: 449 IVDHY---NIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMV--FLD---- 499

Query: 181 LCDFLTRSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEK-------LYALLVPSI--FM 231
              FL +        +  A  S+   + Q  L+   FY+         Y  LV +I  F+
Sbjct: 500 -FRFLEQKIRHDS-TAWNASGSILNTLQQ--LK---FYKPYICDNDPKYERLVNAILDFL 552

Query: 232 AKH-----RAKFFELLDSCLRSPLLPAYLAAAFVKKLSR 265
            K       +K+ +LL   L +     +  A   K++ R
Sbjct: 553 PKIEENLICSKYTDLLRIALMAEDEAIFEEAH--KQVQR 589

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00