Citrus Sinensis ID: 012193


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------47
MVNDGTFYFDEKLVNMREQQGPLATTSSVVRGLTAFSSVITESLNLTGDKILGIAKFFLGIGIPGDTKNFFDQVDSLACLENNRVSIPLILSLPSTVISLTKKDSLKVKVNTVLGSHAPPLTVTLVRAFSSSARDNSIIENQELKFDPQDAVYFLDDLPASFDVGEYIFVFKMLVQDSEQQTVYATGTLTQVPIYVTGLIKIENAKIAVLDSDLGSVETQKKLDLAGESTVSVSANHLQKLRLSFQMSTPLGNAFKPHQAFLRLRHETKVEHTFVVGSSGKKFEITLDFLGLVEKFFYLSGRYDIQLTVGDAVMENSLLRDIGYVELDLPEPPENASRPPPQPVDPYTRYGPKAEITHIFRAPEKRPPQELSLAFLVLTILPLFGFIIGLLRLGVNLKNFPTSAVPATFAVIFHLGIAAVLLLYVLFWLKLDLFTTLKTLCFLGVFLMVVGHRTLSHLASASAKLKSA
ccccccccccccccccccccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcccccccEEEEcccccccccccccEEEEEEEcccccccccEEEEEEEEEEcccccEEEEcccccccccccEEEEccccccccccEEEEEEEEEEccccccEEEEEccEEEEEEEEEEEEEEEEEEEEEEEcccccccEEEEEcccccccEEEEcccccEEEEEEEEEcccccccccEEEEEEEEcccEEEEEEEEEccccEEEEEEcccccccccccccccEEEEEEEEEcccccccEEEEEEEEEccccccccccccccccccccccccccccEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
cccHHEEEEccccccEEEEcccHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHccccEEEEEEEEcccccEccccccEEEEEEEcccccccccEEEEEEEEEEccccEEEEEcccccccccccEEEEEcccccccccEEEEEEEEEEccccccEEEEEcEEEEEEEEEEEEEEEEEEEEEEEEccccccccEEEEEcccccccEEEcccccEEEEEEEEEccccccccccEEEEEEEcccccEEEEEEEcccccEEEEEccccccHHHccccccEEEEEEEEccccccccccccEEEEEEcccccccccccccccccccccccccccEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
mvndgtfyfdeKLVNMReqqgplattssVVRGLTAFSSVITESLNLTGDKILGIAKFFlgigipgdtknffDQVDSLAclennrvsiplilslpstvisltkkdslKVKVNtvlgshapplTVTLVRAFsssardnsiienqelkfdpqdavyflddlpasfdvgEYIFVFKMLVQDSEQQTVYATGTLTQVPIYVTGLIKIENAKIAvldsdlgsvetQKKLDLAGESTVSVSANHLQKLRLSfqmstplgnafkphQAFLRLRhetkvehtfvvgssgkkfeITLDFLGLVEKFFYLSGRYDIQLTVGDAVMENSLlrdigyveldlpeppenasrpppqpvdpytrygpkaeithifrapekrppqeLSLAFLVLTILPLFGFIIGLLRLgvnlknfptsavpaTFAVIFHLGIAAVLLLYVLFWLKLDLFTTLKTLCFLGVFLMVVGHRTLSHLASASAKLKSA
mvndgtfyFDEKLVNMREQQGPLATTSSVVRGLTAFSSVITESLNLTGDKILGIAKFFLGIGIPGDTKNFFDQVDSLACLENNRVSIPLILSLPSTVISLTKKDSLKVKVNtvlgshappltVTLVRAFSSSARDNSIIenqelkfdpqDAVYFLDDLPASFDVGEYIFVFKMLVQDSEQQTVYATGTLTQVPIYVTGLIKIENAKIAVLDSDLGSVETQKKLDLAGESTVSVSANHLQKLRLSFQMSTPLGNAFKPHQAFLRLRHETKVEHtfvvgssgkkfeITLDFLGLVEKFFYLSGRYDIQLTVGDAVMENSLLRDIGYVELDLPEPpenasrpppqpvdPYTRYGPKAEITHIFRAPEKRPPQELSLAFLVLTILPLFGFIIGLLRLGVNLKNFPTSAVPATFAVIFHLGIAAVLLLYVLFWLKLDLFTTLKTLCFLGVFLMVVGHRTLShlasasaklksa
MVNDGTFYFDEKLVNMREQQGPLATTSSVVRGLTAFSSVITESLNLTGDKILGIAKFFLGIGIPGDTKNFFDQVDSLACLENNRVSIPLILSLPSTVISLTKKDSLKVKVNTVLGSHAPPLTVTLVRAFSSSARDNSIIENQELKFDPQDAVYFLDDLPASFDVGEYIFVFKMLVQDSEQQTVYATGTLTQVPIYVTGLIKIENAKIAVLDSDLGSVETQKKLDLAGESTVSVSANHLQKLRLSFQMSTPLGNAFKPHQAFLRLRHETKVEHTFVVGSSGKKFEITLDFLGLVEKFFYLSGRYDIQLTVGDAVMENSLLRDIGYVELDLpeppenasrpppqpVDPYTRYGPKAEITHIFRAPEKRPPQELSLAFLVltilplfgfiigllrlgVNLKNFPTSAVPATFAVIFHLGIAAVlllyvlfwlkldlfttlktlcflGVFLMVVGHRTlshlasasaklksa
******FYFDEKLVN*******LATTSSVVRGLTAFSSVITESLNLTGDKILGIAKFFLGIGIPGDTKNFFDQVDSLACLENNRVSIPLILSLPSTVISLTKKDSLKVKVNTVLGSHAPPLTVTLVRAFSSSARDNSIIENQELKFDPQDAVYFLDDLPASFDVGEYIFVFKMLVQDSEQQTVYATGTLTQVPIYVTGLIKIENAKIAVLDSDLGSVE**************V*ANHLQKLRLSFQMSTPLGNAFKPHQAFLRLRHETKVEHTFVVGSSGKKFEITLDFLGLVEKFFYLSGRYDIQLTVGDAVMENSLLRDIGYVELD***************************ITHIF**********LSLAFLVLTILPLFGFIIGLLRLGVNLKNFPTSAVPATFAVIFHLGIAAVLLLYVLFWLKLDLFTTLKTLCFLGVFLMVVGHRTLSH***********
MVNDGTFYFDEKLVNMREQQGPLATTSSVVRGLTAFSSV**********KILGIAKFFLGIGIPGDTKNFFDQVDSLACLENNRVSIPLILSLP************KVKVNTVLGSHAPPLTVTLV**********************QDAVYFLDDLPASFDVGEYIFVFKMLVQDSEQQTVYATGTLTQVPIYVTGLIKIENAKIA*****************************LQKLRLSFQMSTPLGNAFKPHQAFLRLRHETKVEHTFVVGSSGKKFEITLDFLGLVEKFFYLSGRYDIQLTVGDAVMENSLLRDIGYVELDL********************YGPKAEITHIFRAPEKRPPQELSLAFLVLTILPLFGFIIGLLRLGVNLKNFPTSAVPATFAVIFHLGIAAVLLLYVLFWLKLDLFTTLKTLCFLGVFLMVVGHRTL*************
MVNDGTFYFDEKLVNMREQQGPLATTSSVVRGLTAFSSVITESLNLTGDKILGIAKFFLGIGIPGDTKNFFDQVDSLACLENNRVSIPLILSLPSTVISLTKKDSLKVKVNTVLGSHAPPLTVTLVRAFSSSARDNSIIENQELKFDPQDAVYFLDDLPASFDVGEYIFVFKMLVQDSEQQTVYATGTLTQVPIYVTGLIKIENAKIAVLDSDLGSVETQKKLDLAGESTVSVSANHLQKLRLSFQMSTPLGNAFKPHQAFLRLRHETKVEHTFVVGSSGKKFEITLDFLGLVEKFFYLSGRYDIQLTVGDAVMENSLLRDIGYVELDLPE**********QPVDPYTRYGPKAEITHIFRAPEKRPPQELSLAFLVLTILPLFGFIIGLLRLGVNLKNFPTSAVPATFAVIFHLGIAAVLLLYVLFWLKLDLFTTLKTLCFLGVFLMVVGHRTLSHLA*********
MVNDGTFYFDEKLVNMREQQGPLATTSSVVRGLTAFSSVITESLNLTGDKILGIAKFFLGIGIPGDTKNFFDQVDSLACLENNRVSIPLILSLPSTVISLTKKDSLKVKVNTVLGSHAPPLTVTLVRAFSSSARDNSIIENQELKFDPQDAVYFLDDLPASFDVGEYIFVFKMLVQDSEQQTVYATGTLTQVPIYVTGLIKIENAKIAVLDSDLGSVETQKKLDLAGESTVSVSANHLQKLRLSFQMSTPLGNAFKPHQAFLRLRHETKVEHTFVVGSSGKKFEITLDFLGLVEKFFYLSGRYDIQLTVGDAVMENSLLRDIGYVELDLPEP**********P**PYTRYGPKAEITHIFRAPEKRPPQELSLAFLVLTILPLFGFIIGLLRLGVNLKNFPTSAVPATFAVIFHLGIAAVLLLYVLFWLKLDLFTTLKTLCFLGVFLMVVGHRTLSHLASAS******
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MVNDGTFYFDEKLVNMREQQGPLATTSSVVRGLTAFSSVITESLNLTGDKILGIAKFFLGIGIPGDTKNFFDQVDSLACLENNRVSIPLILSLPSTVISLTKKDSLKVKVNTVLGSHAPPLTVTLVRAFSSSARDNSIIENQELKFDPQDAVYFLDDLPASFDVGEYIFVFKMLVQDSEQQTVYATGTLTQVPIYVTGLIKIENAKIAVLDSDLGSVETQKKLDLAGESTVSVSANHLQKLRLSFQMSTPLGNAFKPHQAFLRLRHETKVEHTFVVGSSGKKFEITLDFLGLVEKFFYLSGRYDIQLTVGDAVMENSLLRDIGYVELDLPEPPENASRPPPQPVDPYTRYGPKAEITHIFRAPEKRPPQELSLAFLVLTILPLFGFIIGLLRLGVNLKNFPTSAVPATFAVIFHLGIAAVLLLYVLFWLKLDLFTTLKTLCFLGVFLMVVGHRTLSHLASASAKLKSA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query468 2.2.26 [Sep-21-2011]
Q93Z16691 Dolichyl-diphosphooligosa yes no 0.991 0.671 0.673 0.0
Q5N7W3698 Dolichyl-diphosphooligosa yes no 0.989 0.663 0.618 1e-172
Q5RBM1631 Dolichyl-diphosphooligosa yes no 0.773 0.573 0.300 1e-32
P04844631 Dolichyl-diphosphooligosa yes no 0.769 0.570 0.296 8e-32
Q3SZI6631 Dolichyl-diphosphooligosa yes no 0.762 0.565 0.293 2e-29
Q9DBG6631 Dolichyl-diphosphooligosa yes no 0.764 0.567 0.290 3e-29
P25235631 Dolichyl-diphosphooligosa yes no 0.764 0.567 0.290 6e-29
Q9GL01629 Dolichyl-diphosphooligosa yes no 0.754 0.561 0.294 1e-25
Q54HG9685 Dolichyl-diphosphooligosa yes no 0.75 0.512 0.255 2e-19
>sp|Q93Z16|RPN2_ARATH Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Arabidopsis thaliana GN=RPN2 PE=2 SV=1 Back     alignment and function desciption
 Score =  656 bits (1693), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 314/466 (67%), Positives = 386/466 (82%), Gaps = 2/466 (0%)

Query: 3   NDGTFYFDEKLVNMREQQGPLATTSSVVRGLTAFSSVITESLNLTGDKILGIAKFFLGIG 62
           +DGTFYFDEK V+    QGP++TT+SV+RGLT+F++  +  LNL GDKI+G+AKFFLG+G
Sbjct: 228 DDGTFYFDEKSVDA--SQGPISTTASVIRGLTSFAASESTGLNLPGDKIVGLAKFFLGVG 285

Query: 63  IPGDTKNFFDQVDSLACLENNRVSIPLILSLPSTVISLTKKDSLKVKVNTVLGSHAPPLT 122
           IPGD K+FF+Q+D+LACLE+N+ S+PLILSLPSTVISLTKK+ LKVKV+TVLGS AP L+
Sbjct: 286 IPGDAKDFFNQIDALACLEDNKFSVPLILSLPSTVISLTKKEPLKVKVSTVLGSKAPALS 345

Query: 123 VTLVRAFSSSARDNSIIENQELKFDPQDAVYFLDDLPASFDVGEYIFVFKMLVQDSEQQT 182
           V L +A SS + D+S+I NQELKFD   A YFLD  P +FD+G+Y FVFK+++ +S  + 
Sbjct: 346 VKLTQALSSKSVDSSVINNQELKFDADSATYFLDSFPKNFDIGKYTFVFKIVLDESAHEK 405

Query: 183 VYATGTLTQVPIYVTGLIKIENAKIAVLDSDLGSVETQKKLDLAGESTVSVSANHLQKLR 242
           VY T   T+VPI  TG I IENA+IAVLDSD+GSVE+QKKLDL  +  VS+SANHLQKLR
Sbjct: 406 VYITEAQTKVPIAATGAISIENAEIAVLDSDIGSVESQKKLDLTKDGAVSLSANHLQKLR 465

Query: 243 LSFQMSTPLGNAFKPHQAFLRLRHETKVEHTFVVGSSGKKFEITLDFLGLVEKFFYLSGR 302
           LSFQ++TPLGNAFKPHQAF +L+HE++VEH F+V +SGKK E+ LDFLGLVEK +YLSG+
Sbjct: 466 LSFQLTTPLGNAFKPHQAFFKLKHESQVEHIFLVKTSGKKSELVLDFLGLVEKLYYLSGK 525

Query: 303 YDIQLTVGDAVMENSLLRDIGYVELDLPEPPENASRPPPQPVDPYTRYGPKAEITHIFRA 362
           Y+IQLT+GDA MENSLL +IG++ELDLPE PE A+RPP Q  +PY+RYGPKAEI+HIFR 
Sbjct: 526 YEIQLTIGDASMENSLLSNIGHIELDLPERPEKATRPPLQSTEPYSRYGPKAEISHIFRI 585

Query: 363 PEKRPPQELSLAFLVLTILPLFGFIIGLLRLGVNLKNFPTSAVPATFAVIFHLGIAAVLL 422
           PEK P ++LSL FL + +LP  GF+IGL RLGVN+K+FP+S   A  A++FH GI AVLL
Sbjct: 586 PEKLPAKQLSLVFLGVIVLPFIGFLIGLTRLGVNIKSFPSSTGSAISALLFHCGIGAVLL 645

Query: 423 LYVLFWLKLDLFTTLKTLCFLGVFLMVVGHRTLSHLASASAKLKSA 468
           LYVLFWLKLDLFTTLK L  LGVFL+ VGHRTLS LASAS KLKSA
Sbjct: 646 LYVLFWLKLDLFTTLKALSLLGVFLLFVGHRTLSQLASASNKLKSA 691




Essential subunit of the N-oligosaccharyl transferase (OST) complex which catalyzes the transfer of a high mannose oligosaccharide from a lipid-linked oligosaccharide donor to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 9EC: 9EC: .EC: 1EC: 8
>sp|Q5N7W3|RPN2_ORYSJ Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Oryza sativa subsp. japonica GN=RPN2 PE=2 SV=1 Back     alignment and function description
>sp|Q5RBM1|RPN2_PONAB Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Pongo abelii GN=RPN2 PE=2 SV=1 Back     alignment and function description
>sp|P04844|RPN2_HUMAN Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Homo sapiens GN=RPN2 PE=1 SV=3 Back     alignment and function description
>sp|Q3SZI6|RPN2_BOVIN Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Bos taurus GN=RPN2 PE=2 SV=1 Back     alignment and function description
>sp|Q9DBG6|RPN2_MOUSE Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Mus musculus GN=Rpn2 PE=2 SV=1 Back     alignment and function description
>sp|P25235|RPN2_RAT Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Rattus norvegicus GN=Rpn2 PE=2 SV=2 Back     alignment and function description
>sp|Q9GL01|RPN2_PIG Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Sus scrofa GN=RPN2 PE=2 SV=1 Back     alignment and function description
>sp|Q54HG9|RPN2_DICDI Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit swp1 OS=Dictyostelium discoideum GN=swp1 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query468
356505035 687 PREDICTED: dolichyl-diphosphooligosaccha 0.993 0.676 0.725 0.0
356572268 688 PREDICTED: dolichyl-diphosphooligosaccha 0.995 0.677 0.716 0.0
449443532 679 PREDICTED: dolichyl-diphosphooligosaccha 0.970 0.668 0.716 0.0
359480291 690 PREDICTED: dolichyl-diphosphooligosaccha 0.995 0.675 0.763 0.0
297744165 756 unnamed protein product [Vitis vinifera] 0.995 0.616 0.763 0.0
224062133 694 predicted protein [Populus trichocarpa] 0.993 0.670 0.727 0.0
356537059 689 PREDICTED: dolichyl-diphosphooligosaccha 0.993 0.674 0.720 0.0
255577958 699 ribophorin II, putative [Ricinus communi 0.985 0.659 0.713 0.0
22328844 691 ribophorin II (RPN2) family protein [Ara 0.991 0.671 0.673 0.0
297804040 693 ribophorin II family protein [Arabidopsi 0.993 0.670 0.670 0.0
>gi|356505035|ref|XP_003521298.1| PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2-like [Glycine max] Back     alignment and taxonomy information
 Score =  700 bits (1806), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/466 (72%), Positives = 399/466 (85%), Gaps = 1/466 (0%)

Query: 3   NDGTFYFDEKLVNMREQQGPLATTSSVVRGLTAFSSVITESLNLTGDKILGIAKFFLGIG 62
           +DGTFYFDEK V  RE QG L+TTSSVVRG+TAF++V +  +NL GDKILG+A FFLGIG
Sbjct: 223 DDGTFYFDEKFVGGREHQGSLSTTSSVVRGVTAFAAVTSGKINLPGDKILGLANFFLGIG 282

Query: 63  IPGDTKNFFDQVDSLACLENNRVSIPLILSLPSTVISLTKKDSLKVKVNTVLGSHAPPLT 122
           IPGD K+FF+QV+SLA LENN+VSIPL+LSLP+TV SL+KKD LKV+VNTVLGS APPLT
Sbjct: 283 IPGDAKDFFNQVESLALLENNKVSIPLVLSLPATVYSLSKKDQLKVRVNTVLGSAAPPLT 342

Query: 123 VTLVRAFSSSARDNSIIENQELKFDPQDAVYFLDDLPASFDVGEYIFVFKMLVQDSEQQT 182
           V LV+AF S+A+D S IE++EL++D  + ++FL+  P + DVG Y+FVF++ + DS  + 
Sbjct: 343 VKLVQAFRSNAKD-SAIESKELQYDQNNGIHFLEAFPDNVDVGTYVFVFEIALHDSAGEK 401

Query: 183 VYATGTLTQVPIYVTGLIKIENAKIAVLDSDLGSVETQKKLDLAGESTVSVSANHLQKLR 242
           VYATG    VPIYVTG+IK+ NA+IAVLDSDLGSVETQK LDLAG   VS+SANHLQKLR
Sbjct: 402 VYATGGQIHVPIYVTGIIKVSNAEIAVLDSDLGSVETQKTLDLAGNDDVSLSANHLQKLR 461

Query: 243 LSFQMSTPLGNAFKPHQAFLRLRHETKVEHTFVVGSSGKKFEITLDFLGLVEKFFYLSGR 302
            SFQ++TP G+AFKPHQAF +L+HETK EH FVVG++G+KFEI LDFLGLVEKF+YLSGR
Sbjct: 462 FSFQLTTPHGHAFKPHQAFFKLKHETKHEHIFVVGNTGRKFEIILDFLGLVEKFYYLSGR 521

Query: 303 YDIQLTVGDAVMENSLLRDIGYVELDLPEPPENASRPPPQPVDPYTRYGPKAEITHIFRA 362
           YDI+LTVGD VMENS LR +G V+LDLPE PE A+R PP PVDPY+RYGPKAEI H+FRA
Sbjct: 522 YDIELTVGDTVMENSFLRLLGEVDLDLPEAPEKAARLPPLPVDPYSRYGPKAEIAHLFRA 581

Query: 363 PEKRPPQELSLAFLVLTILPLFGFIIGLLRLGVNLKNFPTSAVPATFAVIFHLGIAAVLL 422
           PEKRPPQELSL FL L +LP  GF++GLLRLGVNLKNFP+SAVPAT+A +FHLGIAAVLL
Sbjct: 582 PEKRPPQELSLTFLGLILLPFIGFLVGLLRLGVNLKNFPSSAVPATYAFLFHLGIAAVLL 641

Query: 423 LYVLFWLKLDLFTTLKTLCFLGVFLMVVGHRTLSHLASASAKLKSA 468
           LYVLFWLKLDLFTTLKT+ FLG FL+ VGHR LSHLAS S+KLKSA
Sbjct: 642 LYVLFWLKLDLFTTLKTVGFLGAFLLFVGHRILSHLASTSSKLKSA 687




Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356572268|ref|XP_003554291.1| PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2-like [Glycine max] Back     alignment and taxonomy information
>gi|449443532|ref|XP_004139531.1| PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2-like [Cucumis sativus] gi|449508984|ref|XP_004163460.1| PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|359480291|ref|XP_002272576.2| PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|297744165|emb|CBI37135.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224062133|ref|XP_002300771.1| predicted protein [Populus trichocarpa] gi|222842497|gb|EEE80044.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356537059|ref|XP_003537048.1| PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2-like [Glycine max] Back     alignment and taxonomy information
>gi|255577958|ref|XP_002529851.1| ribophorin II, putative [Ricinus communis] gi|223530679|gb|EEF32552.1| ribophorin II, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|22328844|ref|NP_193847.2| ribophorin II (RPN2) family protein [Arabidopsis thaliana] gi|334186764|ref|NP_001190785.1| ribophorin II (RPN2) family protein [Arabidopsis thaliana] gi|75163691|sp|Q93Z16.1|RPN2_ARATH RecName: Full=Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2; AltName: Full=Protein HAPLESS 6; AltName: Full=Ribophorin II; Short=RPN-II; AltName: Full=Ribophorin-2; Flags: Precursor gi|16604454|gb|AAL24233.1| AT4g21150/F7J7_90 [Arabidopsis thaliana] gi|18958022|gb|AAL79584.1| AT4g21150/F7J7_90 [Arabidopsis thaliana] gi|332659008|gb|AEE84408.1| ribophorin II (RPN2) family protein [Arabidopsis thaliana] gi|332659010|gb|AEE84410.1| ribophorin II (RPN2) family protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297804040|ref|XP_002869904.1| ribophorin II family protein [Arabidopsis lyrata subsp. lyrata] gi|297315740|gb|EFH46163.1| ribophorin II family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query468
TAIR|locus:2127328691 HAP6 "HAPLESS 6" [Arabidopsis 0.961 0.651 0.581 6.7e-136
UNIPROTKB|P04844631 RPN2 "Dolichyl-diphosphooligos 0.705 0.522 0.268 2.7e-20
UNIPROTKB|F1PBH2562 RPN2 "Uncharacterized protein" 0.705 0.587 0.265 6.1e-20
UNIPROTKB|F1PCT7647 RPN2 "Uncharacterized protein" 0.705 0.510 0.265 8.6e-20
FB|FBgn0034277634 OstDelta "Oligosaccharide tran 0.841 0.621 0.245 4.3e-19
UNIPROTKB|Q3SZI6631 RPN2 "Dolichyl-diphosphooligos 0.705 0.522 0.262 5.6e-19
ZFIN|ZDB-GENE-030131-7928643 rpn2 "ribophorin II" [Danio re 0.707 0.514 0.254 9.9e-19
MGI|MGI:98085631 Rpn2 "ribophorin II" [Mus musc 0.705 0.522 0.262 4.8e-18
UNIPROTKB|D4A8V6612 Rpn2 "Dolichyl-diphosphooligos 0.705 0.539 0.262 6e-18
UNIPROTKB|E1C8Z0631 RPN2 "Dolichyl-diphosphooligos 0.702 0.521 0.261 6.4e-18
TAIR|locus:2127328 HAP6 "HAPLESS 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1331 (473.6 bits), Expect = 6.7e-136, P = 6.7e-136
 Identities = 263/452 (58%), Positives = 331/452 (73%)

Query:     3 NDGTFYFDEKLVNMREQQGPLATTSSVVRGLTAFSSVITESLNLTGDKILGIAKFFLGIG 62
             +DGTFYFDEK V+    QGP++TT+SV+RGLT+F++  +  LNL GDKI+G+AKFFLG+G
Sbjct:   228 DDGTFYFDEKSVDA--SQGPISTTASVIRGLTSFAASESTGLNLPGDKIVGLAKFFLGVG 285

Query:    63 IPGDTKNFFDQVDSLACLENNRVSIPLILSLPSTVISLTKKDSLKVKVNTVLGSHAPPLT 122
             IPGD K+FF+Q+D+LACLE+N+ S+PLILSLPSTVISLTKK+ LKVKV+TVLGS AP L+
Sbjct:   286 IPGDAKDFFNQIDALACLEDNKFSVPLILSLPSTVISLTKKEPLKVKVSTVLGSKAPALS 345

Query:   123 VTLVRAFSSSARDNSIIENQELKFDPQDAVYFLDDLPASFDVGEYIFVFKMLVQDSEQQT 182
             V L +A SS + D+S+I NQELKFD   A YFLD  P +FD+G+Y FVFK+++ +S  + 
Sbjct:   346 VKLTQALSSKSVDSSVINNQELKFDADSATYFLDSFPKNFDIGKYTFVFKIVLDESAHEK 405

Query:   183 VYATGTLTQVPIYVTGLIKIENAKIAVLDSDLGSVETQKKLDLAGESTVSVSANHLQKLR 242
             VY T   T+VPI  TG I IENA+IAVLDSD+GSVE+QKKLDL  +  VS+SANHLQKLR
Sbjct:   406 VYITEAQTKVPIAATGAISIENAEIAVLDSDIGSVESQKKLDLTKDGAVSLSANHLQKLR 465

Query:   243 LSFQMSTPLGNAFKPHQAFLRLRHETKVEHTFVVGSSGKKFEITLDFLGLVEKFFYLSGR 302
             LSFQ++TPLGNAFKPHQAF +L+HE++VEH F+V +SGKK E+ LDFLGLVEK +YLSG+
Sbjct:   466 LSFQLTTPLGNAFKPHQAFFKLKHESQVEHIFLVKTSGKKSELVLDFLGLVEKLYYLSGK 525

Query:   303 YDIQLTVGDAVMENSLLRDIGYVELDLXXXXXXXXXXXXXXVDPYTRYGPKAEITHIFRA 362
             Y+IQLT+GDA MENSLL +IG++ELDL               +PY+RYGPKAEI+HIFR 
Sbjct:   526 YEIQLTIGDASMENSLLSNIGHIELDLPERPEKATRPPLQSTEPYSRYGPKAEISHIFRI 585

Query:   363 PEKRPPQELSLAFLVXXXXXXXXXXXXXXXXXVNLKNFPTSAVPATFAVIFHLGIAAVXX 422
             PEK P ++LSL FL                  VN+K+FP+S   A  A++FH GI AV  
Sbjct:   586 PEKLPAKQLSLVFLGVIVLPFIGFLIGLTRLGVNIKSFPSSTGSAISALLFHCGIGAVLL 645

Query:   423 XXXXXXXXXXXXXXXXXXXXXGVFLMVVGHRT 454
                                  GVFL+ VGHRT
Sbjct:   646 LYVLFWLKLDLFTTLKALSLLGVFLLFVGHRT 677




GO:0004579 "dolichyl-diphosphooligosaccharide-protein glycotransferase activity" evidence=IEA
GO:0005789 "endoplasmic reticulum membrane" evidence=IEA;ISS
GO:0008250 "oligosaccharyltransferase complex" evidence=IEA
GO:0018279 "protein N-linked glycosylation via asparagine" evidence=IEA
GO:0009409 "response to cold" evidence=IEP
GO:0005739 "mitochondrion" evidence=IDA
GO:0009505 "plant-type cell wall" evidence=IDA
GO:0005783 "endoplasmic reticulum" evidence=IDA
GO:0005774 "vacuolar membrane" evidence=IDA
GO:0005886 "plasma membrane" evidence=IDA
GO:0016020 "membrane" evidence=IDA
GO:0009506 "plasmodesma" evidence=IDA
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0006364 "rRNA processing" evidence=RCA
GO:0030244 "cellulose biosynthetic process" evidence=RCA
UNIPROTKB|P04844 RPN2 "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1PBH2 RPN2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1PCT7 RPN2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
FB|FBgn0034277 OstDelta "Oligosaccharide transferase Delta subunit" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|Q3SZI6 RPN2 "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-7928 rpn2 "ribophorin II" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
MGI|MGI:98085 Rpn2 "ribophorin II" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|D4A8V6 Rpn2 "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|E1C8Z0 RPN2 "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q93Z16RPN2_ARATH2, ., 4, ., 9, 9, ., 1, 80.67380.99140.6714yesno
Q5N7W3RPN2_ORYSJ2, ., 4, ., 9, 9, ., 1, 80.61830.98930.6633yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.1LOW CONFIDENCE prediction!
4th Layer2.4.1.119LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
estExt_fgenesh4_pm.C_LG_II0174
hypothetical protein (695 aa)
(Populus trichocarpa)
Predicted Functional Partners:
estExt_fgenesh4_pg.C_LG_X0451
hypothetical protein (846 aa)
       0.800

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query468
pfam05817636 pfam05817, Ribophorin_II, Oligosaccharyltransferas 1e-175
>gnl|CDD|218763 pfam05817, Ribophorin_II, Oligosaccharyltransferase subunit Ribophorin II Back     alignment and domain information
 Score =  506 bits (1306), Expect = e-175
 Identities = 176/465 (37%), Positives = 262/465 (56%), Gaps = 19/465 (4%)

Query: 1   MVNDGTFYFDEKLVNMREQQGPLATTSSVVRGLTAFSSVITESLNLTGDKILGIAKFFLG 60
            + D     DE   +  + +G L+TT+ VVRG    +  ++    +  ++I+ +A +FL 
Sbjct: 188 EIEDLVAQADELDGDYLQFEGGLSTTALVVRGAYKLADHVSTEPPIKEEQIVKLANYFLS 247

Query: 61  IGIPGDTKNFFDQVDSLACLENNRVSIPLILSLPSTVISLTKKDSLKVKVNTVLGSHAPP 120
                  K+ F  +++LA L NN+  +P+++SLP    SL ++  LKVKV  VLG    P
Sbjct: 248 RKSVQSAKDAFSLLEALAVLSNNKFHVPVVVSLPGPAASLHEQPVLKVKVTNVLGKPLSP 307

Query: 121 LTVTLVRAFSSSARDNSIIENQELKFDPQDAVYFLDDLPASFDVGEYIFVFKMLVQDSEQ 180
            +V LV+A  S +   +++    L FD    V+ L+ + A    G Y FV ++   + + 
Sbjct: 308 ASVKLVQAVKSKSTKAAVLSKVNLTFDLDGDVFELNFMSAKPASGYYTFVVEV---EGDH 364

Query: 181 QTVYATGTLTQVPIYVTGLIKIENAKIAVLDSDLGSVETQKKLDLAGESTVSVSANHLQK 240
           + +Y T  L    + V+G + I+N +++V+D D  SV    K+D   ++ VS+SA+  QK
Sbjct: 365 RYIYNTVELK---VKVSGKVSIDNVELSVVDKDQSSVPKTTKVDYPKKAKVSLSADSHQK 421

Query: 241 LRLSFQM-STPLGNAFKPHQAFLRLRH-ETKVEHTFVVG-SSGKKFEITLDFLGLVEKFF 297
             LSFQ+  TP G    PHQAF+RL + +TK E  FV    S K ++  LD     E F 
Sbjct: 422 FVLSFQLVDTPSGKPLTPHQAFVRLHNQKTKQEIIFVAEPDSSKAYKFELDVGARKEDFG 481

Query: 298 YLSGRYDIQLTVGDAVMENSLLRDIGYVELDLPEPPENASRPPPQPVDPYTRYGPKAEIT 357
            LSG Y++ L VGDA +ENS L ++  VEL  PE       P P  V+  + +GPK EI+
Sbjct: 482 SLSGTYELYLIVGDATLENSFLWNVADVELKFPE------EPAPSTVEAKSLFGPKPEIS 535

Query: 358 HIFRAPEKRPPQELSLAFLVLTILPLFGFIIGLLRLGVNLKNFPTSAVPATFAVIFHLGI 417
           H+FR PEKRPP  +S  F  L +LPL   +I  ++LGVN+ NFP S      A++FHLG+
Sbjct: 536 HLFREPEKRPPTVVSNTFTALILLPLLLLLILWMKLGVNISNFPFS----PSAILFHLGL 591

Query: 418 AAVLLLYVLFWLKLDLFTTLKTLCFLGVFLMVVGHRTLSHLASAS 462
            A+L LY +FWLKL++FTTLK L  LGVF  + G+R LS +A   
Sbjct: 592 GAILGLYYVFWLKLNMFTTLKYLAILGVFTFLAGNRMLSQIAVKR 636


This family contains eukaryotic Ribophorin II (RPN2) proteins. The mammalian oligosaccharyltransferase (OST) is a protein complex that effects the cotranslational N-glycosylation of newly synthesised polypeptides, and is composed of the following proteins: ribophorins I and II (RI and RII), OST48, and Dadl, N33/IAP, OST4, STT3. The family also includes the SWP1 protein from yeast. In yeast the oligosaccharyltransferase complex is composed 7 or 8 subunits, SWP1, being one of them. Length = 636

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 468
PF05817636 Ribophorin_II: Oligosaccharyltransferase subunit R 100.0
KOG2447287 consensus Oligosaccharyltransferase, delta subunit 100.0
>PF05817 Ribophorin_II: Oligosaccharyltransferase subunit Ribophorin II; InterPro: IPR008814 This family consists of several eukaryotic Ribophorin II (RPN2) proteins Back     alignment and domain information
Probab=100.00  E-value=3.9e-114  Score=939.31  Aligned_cols=445  Identities=38%  Similarity=0.614  Sum_probs=420.8

Q ss_pred             ccccceeeeccccccccccCCcchhhhhhhhhhhccccccCCCCCChhHHHHHhhhhhccCCCCChhhHHHHHHHHHhhh
Q 012193            2 VNDGTFYFDEKLVNMREQQGPLATTSSVVRGLTAFSSVITESLNLTGDKILGIAKFFLGIGIPGDTKNFFDQVDSLACLE   81 (468)
Q Consensus         2 ~~~~~~~~~~~~~~~~~feggLs~Ta~~v~g~~~l~~~~~k~~~i~~~Q~~~~anyllsr~~~~s~~~a~~~~~al~~l~   81 (468)
                      +||+.++.||.....-+|||||++||++|+|+|+|+++++|+|+|++||++||||||||||++|++||||++++||++|+
T Consensus       189 ieD~v~qaDEv~~~~LqFeggLs~TA~vv~g~~~la~~~~k~~~i~~dQivklanylLsrr~v~s~k~a~~l~~al~~L~  268 (636)
T PF05817_consen  189 IEDAVAQADEVDGKYLQFEGGLSTTALVVRGIYKLADAVGKKPPIKEDQIVKLANYLLSRRSVQSPKDAFNLLEALKSLS  268 (636)
T ss_pred             HHHHHHhhhhhcccceeecCCchhhHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHh
Confidence            68999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCeeecEEEEccCceeccccCCceEEEEEeccCCCCCCceEEEEEeEeecCCCceEEeccccccCCCCceEEEcCCCCC
Q 012193           82 NNRVSIPLILSLPSTVISLTKKDSLKVKVNTVLGSHAPPLTVTLVRAFSSSARDNSIIENQELKFDPQDAVYFLDDLPAS  161 (468)
Q Consensus        82 ~n~~~~Pi~~~l~~~~~~~~~~~~l~v~V~~vlg~~l~~~~V~~~~~~~~~~~~~~v~~~~~l~~~~~~~~y~l~~~~~k  161 (468)
                      +|++++|+|+++++++++.+++|.|+|+|+|+||+|+++++|++++++++.+++++++++++|+++++++.|++|+++.|
T Consensus       269 ~N~~~~Pv~i~l~~~~~~~~~~~~l~v~Vt~vlG~~~~~~~v~~~~a~~s~~~~~~vls~~~l~~~~~~~~~~l~~~~~k  348 (636)
T PF05817_consen  269 SNKFHVPVVISLESSASLSSSKPSLKVRVTNVLGQPLPPLSVKLVSAISSSSDDSVVLSNKPLTFDSDKTVYELDLMSLK  348 (636)
T ss_pred             hCCccccEEEEeCCCcccccCCCcEEEEEEeccCCcCCcchhhhhhhhhccCCcceeeccccceecCCCCeEEEecccCC
Confidence            99999999999999999999999999999999999999999999999888888899999999998888889999999999


Q ss_pred             CCceeEEEEEEEeecccccceeeeecceeEEEEEEEEEEEEEeeEEEEecCCCCccceeeeeecCCCcceeeecCCcceE
Q 012193          162 FDVGEYIFVFKMLVQDSEQQTVYATGTLTQVPIYVTGLIKIENAKIAVLDSDLGSVETQKKLDLAGESTVSVSANHLQKL  241 (468)
Q Consensus       162 ~~~G~Y~~~~~v~~~d~~~~~~~~~~~~~~~~v~V~~~v~v~~~~~~v~d~d~~~~~~~~~l~~~~kl~~~L~ad~~~~l  241 (468)
                      +++|+|++++++ .   ++ ..+++ .+.+++|||+++|+|++++++|.|+|+++.++++++++++++..+|++|++|++
T Consensus       349 ~~~G~Y~~~~~~-~---~~-~~~~~-~~~~~~vkV~~~v~v~~~~v~v~d~d~~~~~~~~~v~~~~k~~~~l~ad~~~~l  422 (636)
T PF05817_consen  349 PARGYYKFSFSV-S---GD-KRLIG-NTAQLQVKVLGEVSVENAEVSVADSDQSSAPKKTSVDYPSKLSSSLSADSHQKL  422 (636)
T ss_pred             CCCceEEEEEEe-c---Cc-cceee-eEEEEEEEEEEEEEEeEEEEEeecCCCCcCcceeeecccccccCCccCCCCceE
Confidence            999999999987 2   12 23333 348899999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEEEc-CCCCCCCceeEEEEEEe-CCceEEEEEec-cCCceEEEEEccccchhhhhccCccEEEEEEEecccccCCc
Q 012193          242 RLSFQMST-PLGNAFKPHQAFLRLRH-ETKVEHTFVVG-SSGKKFEITLDFLGLVEKFFYLSGRYDIQLTVGDAVMENSL  318 (468)
Q Consensus       242 ~l~F~l~~-~~g~~~~PhQafl~L~~-~tg~e~~f~vk-~s~k~y~~~ld~~~l~~~f~~~sg~y~v~LivgD~~~~~~~  318 (468)
                      +++|+|++ ++|++++||||||||+| ++|+|++|+++ +++++|++++|.++++++|.++||+|+++|||||+.++||+
T Consensus       423 ~l~f~l~~~~~g~~~~phQafl~l~~~~t~~e~~f~~~~~~~~~~k~~l~~~~~~~~f~~~sg~y~~~LiiGd~~~~~~~  502 (636)
T PF05817_consen  423 KLKFSLTDKSDGKPKRPHQAFLRLTHQETGLEIIFPAEVDSSGKYKFELDLKDLPKQFLYLSGPYSLSLIIGDASISNPL  502 (636)
T ss_pred             EEEEEEEEcCCCCccceeEEEEEEEeCCCCceEEEeeecCCCceEEEEEeccccchhhhhcCCceeEEEEEecCCcCCce
Confidence            99999965 78999999999999999 99999999996 55678999999999999999999999999999999999999


Q ss_pred             ceeeeeEEecCCCCCCCCCCCCCCCCCCCCCCCCCCceeeeccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHhcccCC
Q 012193          319 LRDIGYVELDLPEPPENASRPPPQPVDPYTRYGPKAEITHIFRAPEKRPPQELSLAFLVLTILPLFGFIIGLLRLGVNLK  398 (468)
Q Consensus       319 ~~~l~~v~L~~~~~~~~~~~~p~~~~e~~~ry~pkPEI~HiFR~peK~Pp~ivS~~Ft~lvlapll~Lli~W~~lG~Nl~  398 (468)
                      .|++|+++|++++..      ++.+++++.||+|||||||+||+||||||++||++|+++|++||++||++|.++|+|++
T Consensus       503 ~~~l~~i~l~~~~~~------~~~~~~~~~ry~~kpEI~H~Fr~~eK~pp~~vS~~F~~~vlapl~~Ll~~W~~lG~Nl~  576 (636)
T PF05817_consen  503 NWNLGDISLKFPEDA------PPPKYEKPVRYGPKPEIHHIFREPEKRPPKIVSLVFTGLVLAPLLVLLILWLKLGANLS  576 (636)
T ss_pred             eeeeeEEEEecCCcC------CCCCccccccCCCCCceeeecCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHcCcchh
Confidence            999999999998741      22456678999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCcchhHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHhhhheeeeehhHHHHHHHHHh
Q 012193          399 NFPTSAVPATFAVIFHLGIAAVLLLYVLFWLKLDLFTTLKTLCFLGVFLMVVGHRTLSHLASAS  462 (468)
Q Consensus       399 n~p~s~~p~~~~i~F~~sL~gie~Lf~~Ywl~l~lFqTL~~l~~Lg~~t~l~G~r~Lr~la~~r  462 (468)
                      |+|+++    ++++||+||+|||++|++||++|||||||+|+++||+|||++|+|+||++++||
T Consensus       577 ~l~~~~----~~~~F~~~l~ai~glf~~Yw~~l~lFqTL~~~~~lg~~t~~~G~r~L~~~a~~r  636 (636)
T PF05817_consen  577 NLPFSP----SAILFHGGLGAIEGLFFLYWLGLNLFQTLPYLAVLGAVTFLSGNRALRELAERR  636 (636)
T ss_pred             hCCCCc----hHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhHHHHHHHhhcC
Confidence            999998    699999999999999999999999999999999999999999999999999998



The mammalian oligosaccharyltransferase (OST) is a protein complex that effects the cotranslational N-glycosylation of newly synthesised polypeptides, and is composed of at least four rough ER-specific membrane proteins: ribophorins I and II (RI and RII), OST48, and Dadl. The mechanism(s) by which the subunits of this complex are retained in the ER are not well understood [].; GO: 0004579 dolichyl-diphosphooligosaccharide-protein glycotransferase activity, 0018279 protein N-linked glycosylation via asparagine, 0005789 endoplasmic reticulum membrane, 0008250 oligosaccharyltransferase complex

>KOG2447 consensus Oligosaccharyltransferase, delta subunit (ribophorin II) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query468
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 54.5 bits (130), Expect = 5e-08
 Identities = 45/285 (15%), Positives = 91/285 (31%), Gaps = 68/285 (23%)

Query: 140 ENQELKFDPQDAVY-FLDDLPASFDVGEYIFVFKMLVQDSEQQTVYATGTLTQVPIYVTG 198
           E  E ++  +D +  F D    +FD  +   + K ++   E   +  +       + +  
Sbjct: 10  ETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFW 69

Query: 199 LIKIENAKIA------VLDSDLG----SVETQKKLDLAGESTVSVSANHLQKLRLSFQMS 248
            +  +  ++       VL  +       ++T+++   +  + + +      +L    Q+ 
Sbjct: 70  TLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQR-QPSMMTRMYIE--QRDRLYNDNQVF 126

Query: 249 TPLG-NAFKPH----QAFLRLRHETKVEHTFVVG--SSGK-----------KFEITLDFL 290
                +  +P+    QA L LR    V    + G   SGK           K +  +DF 
Sbjct: 127 AKYNVSRLQPYLKLRQALLELRPAKNV---LIDGVLGSGKTWVALDVCLSYKVQCKMDF- 182

Query: 291 GLVEKFFYLS-GRYDIQLTVGDAVME--NSLLRDIGYVELDLPEPPENASRPPPQPVDPY 347
               K F+L+    +      + V+E    LL  I        +   N        +   
Sbjct: 183 ----KIFWLNLKNCNSP----ETVLEMLQKLLYQIDPNWTSRSDHSSN----IKLRIHSI 230

Query: 348 TRYGPKAEITHIFRAPEKRPPQELSLAFLVL------TILPLFGF 386
                +AE+  + +   K     L    LVL           F  
Sbjct: 231 -----QAELRRLLK--SKPYENCL----LVLLNVQNAKAWNAFNL 264


>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00