Citrus Sinensis ID: 012212
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 468 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SGA8 | 464 | UDP-glycosyltransferase 8 | yes | no | 0.946 | 0.954 | 0.398 | 8e-93 | |
| Q9M9E7 | 489 | UDP-glycosyltransferase 8 | no | no | 0.963 | 0.922 | 0.335 | 4e-73 | |
| Q9SK82 | 489 | UDP-glycosyltransferase 8 | no | no | 0.961 | 0.920 | 0.32 | 9e-70 | |
| Q9LMF1 | 488 | UDP-glycosyltransferase 8 | no | no | 0.963 | 0.924 | 0.315 | 5e-69 | |
| Q9ZWJ3 | 481 | UDP-glycosyltransferase 8 | no | no | 0.967 | 0.941 | 0.314 | 7e-67 | |
| Q9LMF0 | 479 | UDP-glycosyltransferase 8 | no | no | 0.833 | 0.814 | 0.342 | 3e-66 | |
| Q9LME8 | 487 | UDP-glycosyltransferase 8 | no | no | 0.965 | 0.928 | 0.299 | 5e-64 | |
| Q9SBL1 | 492 | Cyanohydrin beta-glucosyl | N/A | no | 0.961 | 0.914 | 0.323 | 7e-59 | |
| P0C7P7 | 453 | UDP-glycosyltransferase 7 | no | no | 0.931 | 0.962 | 0.307 | 2e-56 | |
| Q9SJL0 | 490 | UDP-glycosyltransferase 8 | no | no | 0.957 | 0.914 | 0.291 | 2e-55 |
| >sp|Q9SGA8|U83A1_ARATH UDP-glycosyltransferase 83A1 OS=Arabidopsis thaliana GN=UGT83A1 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 341 bits (874), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 184/462 (39%), Positives = 274/462 (59%), Gaps = 19/462 (4%)
Query: 4 QPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDS--SSQ 61
+PHV+VIPYPAQGHV PL+ + +A++ I++T +NT+F H +II+SL + Q
Sbjct: 11 RPHVVVIPYPAQGHVLPLISFSRYLAKQGIQITFINTEFNHNRIISSLPNSPHEDYVGDQ 70
Query: 62 IKLVTIPDGLELQAADREDPLKLGESVARAMRGCLRDLIEKI-NQSNDCEPIRCVIADVT 120
I LV+IPDGLE +R P KL ESV R M + +LIE++ +++ I CV+AD +
Sbjct: 71 INLVSIPDGLEDSPEERNIPGKLSESVLRFMPKKVEELIERMMAETSGGTIISCVVADQS 130
Query: 121 VGSALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGIIDPNGFAILNDGLISLSDEI 180
+G A+EVA GI R A P S+ L KL++ G+ID +G +N I LS +
Sbjct: 131 LGWAIEVAAKFGIRRTAFCPAAAASMVLGFSIQKLIDDGLIDSDGTVRVNK-TIQLSPGM 189
Query: 181 PAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACDLIPNILP 240
P + +++ W QK + ++ +++ ++W++ NSV+EL++ A L PNI+P
Sbjct: 190 PKMETDKFVWVCLKNKESQKNIFQLMLQNNNSIESTDWLLCNSVHELETAAFGLGPNIVP 249
Query: 241 IGPL--LASNHSGDLD-GNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELAL 297
IGP+ S G G+F D CL WLD Q SV+YVAFGS V+ Q ELA+
Sbjct: 250 IGPIGWAHSLEEGSTSLGSFLPHDRDCLDWLDRQIPGSVIYVAFGSFGVMGNPQLEELAI 309
Query: 298 GLESLQKPFLWVIRQDFMNGSRAKFPDGFIERVSNRGKIVEWAPQEKVLGHSSVACFISH 357
GLE ++P LWV G + G S+R K+V WAPQ +VL ++ CF+SH
Sbjct: 310 GLELTKRPVLWV------TGDQQPIKLG-----SDRVKVVRWAPQREVLSSGAIGCFVSH 358
Query: 358 CGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGIITRQEIQRKVL 417
CGWNST+EG G+PFLC PYF+DQ+ N+ YIC+ WKIGL D G++ R E+++K+
Sbjct: 359 CGWNSTLEGAQNGIPFLCIPYFADQFINKAYICDVWKIGLGLERDARGVVPRLEVKKKID 418
Query: 418 TLLKN-DDIRSNSLKLKEVARKSLLGGGSSFRNFESFISDIK 458
++++ + ++K+KE+ KS+ G S N F++ IK
Sbjct: 419 EIMRDGGEYEERAMKVKEIVMKSVAKDGISCENLNKFVNWIK 460
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Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: - |
| >sp|Q9M9E7|U85A4_ARATH UDP-glycosyltransferase 85A4 OS=Arabidopsis thaliana GN=UGT85A4 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 276 bits (705), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 160/477 (33%), Positives = 254/477 (53%), Gaps = 26/477 (5%)
Query: 2 SRQPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQ 61
S++PH + IPYPAQGH+ P++KLA + R VT VNT + H++I+ S A +
Sbjct: 9 SQKPHAMCIPYPAQGHINPMLKLAKLLHARGFHVTFVNTDYNHRRILQSRGPHALNGLPS 68
Query: 62 IKLVTIPDGLELQAAD-REDPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVT 120
+ TIPDGL D ++D LKL +S +DLI ++N +D P+ C+I+D +
Sbjct: 69 FRFETIPDGLPWTDVDAKQDMLKLIDSTINNCLAPFKDLILRLNSGSDIPPVSCIISDAS 128
Query: 121 VGSALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGIIDPNGFAILNDGLISLSDEI 180
+ ++ AE + I + +L L L + KL+E II + L L + D I
Sbjct: 129 MSFTIDAAEELKIPVVLLWTNSATALILYLHYQKLIEKEIIPLKDSSDLKKHLETEIDWI 188
Query: 181 PAWKRNEYTWSFPD---EPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPAC----D 233
P+ K+ + FPD + Q ++ I V +K ++ I N+ +L+
Sbjct: 189 PSMKKIKLK-DFPDFVTTTNPQDPMISFILHVTGRIKRASAIFINTFEKLEHNVLLSLRS 247
Query: 234 LIPNILPIGPL-LASNHSGD-------LDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVA 285
L+P I +GP + N D L N W E++ L WLD +A ++V+YV FGS+
Sbjct: 248 LLPQIYSVGPFQILENREIDKNSEIRKLGLNLWEEETESLDWLDTKAEKAVIYVNFGSLT 307
Query: 286 VLSQQQFAELALGLESLQKPFLWVIRQDFMNGSRAKFPDGFIERVSNRGKIVE-WAPQEK 344
VL+ +Q E A GL K FLWV+R ++G + P F+ NRG +++ W QEK
Sbjct: 308 VLTSEQILEFAWGLARSGKEFLWVVRSGMVDGDDSILPAEFLSETKNRGMLIKGWCSQEK 367
Query: 345 VLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADEN 404
VL H ++ F++HCGWNST+E L GVP +CWP+F+DQ NR + CE W IG++ +
Sbjct: 368 VLSHPAIGGFLTHCGWNSTLESLYAGVPMICWPFFADQLTNRKFCCEDWGIGMEIGEE-- 425
Query: 405 GIITRQEIQRKVLTLL---KNDDIRSNSLKLKEVARK-SLLGGGSSFRNFESFISDI 457
+ R+ ++ V L+ K +R ++ + +A + S GSS+ NFE+ ++ +
Sbjct: 426 --VKRERVETVVKELMDGEKGKRLREKVVEWRRLAEEASAPPLGSSYVNFETVVNKV 480
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
| >sp|Q9SK82|U85A1_ARATH UDP-glycosyltransferase 85A1 OS=Arabidopsis thaliana GN=UGT85A1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 264 bits (675), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 152/475 (32%), Positives = 242/475 (50%), Gaps = 25/475 (5%)
Query: 2 SRQPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQ 61
S++PHV+ +PYPAQGH+ P+M++A + R VT VNT + H + + S A D
Sbjct: 9 SQKPHVVCVPYPAQGHINPMMRVAKLLHARGFYVTFVNTVYNHNRFLRSRGSNALDGLPS 68
Query: 62 IKLVTIPDGL-ELQAADREDPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVT 120
+ +I DGL E +D L ES + R+L+++IN ++ P+ C+++D
Sbjct: 69 FRFESIADGLPETDMDATQDITALCESTMKNCLAPFRELLQRINAGDNVPPVSCIVSDGC 128
Query: 121 VGSALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGIIDPNGFAILNDGLI--SLSD 178
+ L+VAE +G+ + L F +E G+ + L + ++ D
Sbjct: 129 MSFTLDVAEELGVPEVLFWTTSGCAFLAYLHFYLFIEKGLCPLKDESYLTKEYLEDTVID 188
Query: 179 EIPAWKRNEYT--WSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACDLIP 236
IP K + SF + +++ + K ++ II N+ +L+ +
Sbjct: 189 FIPTMKNVKLKDIPSFIRTTNPDDVMISFALRETERAKRASAIILNTFDDLEHDVVHAMQ 248
Query: 237 NILP----IGPL-LASNHS-------GDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSV 284
+ILP +GPL L +N G + N W E+ CL WLD + SV+Y+ FGS+
Sbjct: 249 SILPPVYSVGPLHLLANREIEEGSEIGMMSSNLWKEEMECLDWLDTKTQNSVIYINFGSI 308
Query: 285 AVLSQQQFAELALGLESLQKPFLWVIRQDFMNGSRAKFPDGFIERVSNRGKIVEWAPQEK 344
VLS +Q E A GL K FLWVIR D + G A P F+ +R + W PQEK
Sbjct: 309 TVLSVKQLVEFAWGLAGSGKEFLWVIRPDLVAGEEAMVPPDFLMETKDRSMLASWCPQEK 368
Query: 345 VLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADEN 404
VL H ++ F++HCGWNS +E LS GVP +CWP+F+DQ N + C+ W +G++ D
Sbjct: 369 VLSHPAIGGFLTHCGWNSILESLSCGVPMVCWPFFADQQMNCKFCCDEWDVGIEIGGD-- 426
Query: 405 GIITRQEIQRKVLTLL---KNDDIRSNSLKLKEVARKSLLGG-GSSFRNFESFIS 455
+ R+E++ V L+ K +R +++ + +A K+ GSS NFE+ +S
Sbjct: 427 --VKREEVEAVVRELMDGEKGKKMREKAVEWQRLAEKATEHKLGSSVMNFETVVS 479
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Involved in the O-glucosylation of trans-zeatin and dihydrozeatin. Also active in vitro on cis-zeatin. Not active on N-glucosylated substrates. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
| >sp|Q9LMF1|U85A3_ARATH UDP-glycosyltransferase 85A3 OS=Arabidopsis thaliana GN=UGT85A3 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 262 bits (669), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 150/475 (31%), Positives = 246/475 (51%), Gaps = 24/475 (5%)
Query: 3 RQPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQI 62
++PHV+ +PYPAQGH+ P+MK+A + + VT VNT + H +++ S A D
Sbjct: 10 QKPHVVCVPYPAQGHINPMMKVAKLLHVKGFHVTFVNTVYNHNRLLRSRGANALDGLPSF 69
Query: 63 KLVTIPDGLELQAAD-REDPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTV 121
+ +IPDGL D +D L ES + + L+++I D P+ C+++D ++
Sbjct: 70 QFESIPDGLPETGVDATQDIPALSESTTKNCLVPFKKLLQRIVTREDVPPVSCIVSDGSM 129
Query: 122 GSALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGIID-PNGFAILNDGLISLSDEI 180
L+VAE +G+ L F +E G+ + + + L ++ D I
Sbjct: 130 SFTLDVAEELGVPEIHFWTTSACGFMAYLHFYLFIEKGLCPVKDASCLTKEYLDTVIDWI 189
Query: 181 PAWKRNEYT--WSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACD----L 234
P+ + SF + I+L + K ++ II N+ +L+ +
Sbjct: 190 PSMNNVKLKDIPSFIRTTNPNDIMLNFVVREACRTKRASAIILNTFDDLEHDIIQSMQSI 249
Query: 235 IPNILPIGPL-LASNHS-------GDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAV 286
+P + PIGPL L N G + N W E++ CL WL+ ++ SVVYV FGS+ +
Sbjct: 250 LPPVYPIGPLHLLVNREIEEDSEIGRMGSNLWKEETECLGWLNTKSRNSVVYVNFGSITI 309
Query: 287 LSQQQFAELALGLESLQKPFLWVIRQDFMNGSRAKFPDGFIERVSNRGKIVEWAPQEKVL 346
++ Q E A GL + K FLWV+R D + G A P F+ ++R + W PQEKVL
Sbjct: 310 MTTAQLLEFAWGLAATGKEFLWVMRPDSVAGEEAVIPKEFLAETADRRMLTSWCPQEKVL 369
Query: 347 GHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGI 406
H +V F++HCGWNST+E LS GVP +CWP+F++Q N + C+ W++G++ D
Sbjct: 370 SHPAVGGFLTHCGWNSTLESLSCGVPMVCWPFFAEQQTNCKFSCDEWEVGIEIGGD---- 425
Query: 407 ITRQEIQRKVLTLL---KNDDIRSNSLKLKEVARKSL-LGGGSSFRNFESFISDI 457
+ R E++ V L+ K +R +++ + +A K+ L GSS NFE+ ++ +
Sbjct: 426 VKRGEVEAVVRELMDGEKGKKMREKAVEWRRLAEKATKLPCGSSVINFETIVNKV 480
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
| >sp|Q9ZWJ3|U85A2_ARATH UDP-glycosyltransferase 85A2 OS=Arabidopsis thaliana GN=UGT85A2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 254 bits (650), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 150/477 (31%), Positives = 246/477 (51%), Gaps = 24/477 (5%)
Query: 1 MSRQPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSS 60
++++ HV+ +PYPAQGH+ P+MK+A + + +T VNT + H +++ S A D
Sbjct: 5 VAQKQHVVCVPYPAQGHINPMMKVAKLLYAKGFHITFVNTVYNHNRLLRSRGPNAVDGLP 64
Query: 61 QIKLVTIPDGLELQAAD-REDPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADV 119
+ +IPDGL D +D L ES + ++L+ +IN +D P+ C+++D
Sbjct: 65 SFRFESIPDGLPETDVDVTQDIPTLCESTMKHCLAPFKELLRQINARDDVPPVSCIVSDG 124
Query: 120 TVGSALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGIIDPNGFAILN-DGLISLSD 178
+ L+ AE +G+ L + + +E G+ + L + L + D
Sbjct: 125 CMSFTLDAAEELGVPEVLFWTTSACGFLAYLYYYRFIEKGLSPIKDESYLTKEHLDTKID 184
Query: 179 EIPAWK--RNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACD--- 233
IP+ K R + SF + I+L I K ++ II N+ +L+
Sbjct: 185 WIPSMKNLRLKDIPSFIRTTNPDDIMLNFIIREADRAKRASAIILNTFDDLEHDVIQSMK 244
Query: 234 -LIPNILPIGPL--LASNHSGDLD------GNFWSEDSSCLSWLDEQAIRSVVYVAFGSV 284
++P + IGPL L SG+ N W E++ CL WL+ +A SVVYV FGS+
Sbjct: 245 SIVPPVYSIGPLHLLEKQESGEYSEIGRTGSNLWREETECLDWLNTKARNSVVYVNFGSI 304
Query: 285 AVLSQQQFAELALGLESLQKPFLWVIRQDFMNGSRAKFPDGFIERVSNRGKIVEWAPQEK 344
VLS +Q E A GL + K FLWVIR D + G A P F+ ++R + W PQEK
Sbjct: 305 TVLSAKQLVEFAWGLAATGKEFLWVIRPDLVAGDEAMVPPEFLTATADRRMLASWCPQEK 364
Query: 345 VLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADEN 404
VL H ++ F++HCGWNST+E L GVP +CWP+F++Q N + + W++G++ D
Sbjct: 365 VLSHPAIGGFLTHCGWNSTLESLCGGVPMVCWPFFAEQQTNCKFSRDEWEVGIEIGGD-- 422
Query: 405 GIITRQEIQRKVLTLL---KNDDIRSNSLKLKEVARKSL-LGGGSSFRNFESFISDI 457
+ R+E++ V L+ K ++R + + + +A ++ GSS NFE ++ +
Sbjct: 423 --VKREEVEAVVRELMDEEKGKNMREKAEEWRRLANEATEHKHGSSKLNFEMLVNKV 477
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
| >sp|Q9LMF0|U85A5_ARATH UDP-glycosyltransferase 85A5 OS=Arabidopsis thaliana GN=UGT85A5 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 253 bits (645), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 144/421 (34%), Positives = 219/421 (52%), Gaps = 31/421 (7%)
Query: 3 RQPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQI 62
++PHV+ IP+PAQGH+ P++K+A + R VT VNT + H ++I S + D
Sbjct: 10 QKPHVVCIPFPAQGHINPMLKVAKLLYARGFHVTFVNTNYNHNRLIRSRGPNSLDGLPSF 69
Query: 63 KLVTIPDGLELQAAD-REDPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTV 121
+ +IPDGL + D +D L ES + ++L+ +IN + D P+ C+++D +
Sbjct: 70 RFESIPDGLPEENKDVMQDVPTLCESTMKNCLAPFKELLRRINTTKDVPPVSCIVSDGVM 129
Query: 122 GSALEVAESMGIARAAV-VPFGPGSLALSLQFPKLLEAG---IIDPNGFAILNDGLISLS 177
L+ AE +G+ P G LA L F + +E G I D + + + S+
Sbjct: 130 SFTLDAAEELGVPDVLFWTPSACGFLAY-LHFYRFIEKGLSPIKDESSLDTKINWIPSMK 188
Query: 178 D----EIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPAC- 232
+ +IP++ R T + I+L K ++ II N+ L+
Sbjct: 189 NLGLKDIPSFIRATNT---------EDIMLNFFVHEADRAKRASAIILNTFDSLEHDVVR 239
Query: 233 ---DLIPNILPIGPL-LASNHS-------GDLDGNFWSEDSSCLSWLDEQAIRSVVYVAF 281
+IP + IGPL L N G + N W E+ CL WLD ++ SVVYV F
Sbjct: 240 SIQSIIPQVYTIGPLHLFVNRDIDEESDIGQIGTNMWREEMECLDWLDTKSPNSVVYVNF 299
Query: 282 GSVAVLSQQQFAELALGLESLQKPFLWVIRQDFMNGSRAKFPDGFIERVSNRGKIVEWAP 341
GS+ V+S +Q E A GL + +K FLWVIR D + G P F+ +NR + W P
Sbjct: 300 GSITVMSAKQLVEFAWGLAATKKDFLWVIRPDLVAGDVPMLPPDFLIETANRRMLASWCP 359
Query: 342 QEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFA 401
QEKVL H +V F++H GWNST+E LS GVP +CWP+F++Q N Y C+ W++G++
Sbjct: 360 QEKVLSHPAVGGFLTHSGWNSTLESLSGGVPMVCWPFFAEQQTNCKYCCDEWEVGMEIGG 419
Query: 402 D 402
D
Sbjct: 420 D 420
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
| >sp|Q9LME8|U85A7_ARATH UDP-glycosyltransferase 85A7 OS=Arabidopsis thaliana GN=UGT85A7 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 245 bits (625), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 143/477 (29%), Positives = 245/477 (51%), Gaps = 25/477 (5%)
Query: 2 SRQPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQ 61
+++PHV+ +PYPAQGH+ P++K+A + + VT VNT + H +++ S A D
Sbjct: 9 AQKPHVVCVPYPAQGHINPMLKVAKLLYAKGFHVTFVNTLYNHNRLLRSRGPNALDGFPS 68
Query: 62 IKLVTIPDGLELQAADR-EDPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVT 120
+ +IPDGL DR + + S+ + ++++ +IN +D P+ C+++D
Sbjct: 69 FRFESIPDGLPETDGDRTQHTPTVCMSIEKNCLAPFKEILRRINDKDDVPPVSCIVSDGV 128
Query: 121 VGSALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGIIDPNGFAILN-DGLISLSDE 179
+ L+ AE +G+ L F +E G+ + ++ + L ++ D
Sbjct: 129 MSFTLDAAEELGVPEVIFWTNSACGFMTILHFYLFIEKGLSPFKDESYMSKEHLDTVIDW 188
Query: 180 IPAWK--RNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACDLIPN 237
IP+ K R + S+ + I+L + ++ K ++ II N+ EL+ + +
Sbjct: 189 IPSMKNLRLKDIPSYIRTTNPDNIMLNFLIREVERSKRASAIILNTFDELEHDVIQSMQS 248
Query: 238 ILP----IGPLL--------ASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVA 285
ILP IGPL ++ G + N W E+ CL WLD + SV++V FG +
Sbjct: 249 ILPPVYSIGPLHLLVKEEINEASEIGQMGLNLWREEMECLDWLDTKTPNSVLFVNFGCIT 308
Query: 286 VLSQQQFAELALGLESLQKPFLWVIRQDFMNG-SRAKFPDGFIERVSNRGKIVEWAPQEK 344
V+S +Q E A GL + +K FLWVIR + + G + P F+ +R + W PQEK
Sbjct: 309 VMSAKQLEEFAWGLAASRKEFLWVIRPNLVVGEAMVVLPQEFLAETIDRRMLASWCPQEK 368
Query: 345 VLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADEN 404
VL H ++ F++HCGWNST+E L+ GVP +CWP FS+Q N + C+ W +G++ D
Sbjct: 369 VLSHPAIGGFLTHCGWNSTLESLAGGVPMICWPCFSEQPTNCKFCCDEWGVGIEIGKD-- 426
Query: 405 GIITRQEIQRKVLTLL---KNDDIRSNSLKLKEVARKSL-LGGGSSFRNFESFISDI 457
+ R+E++ V L+ K +R + + + +A ++ GSS N E+ I +
Sbjct: 427 --VKREEVETVVRELMDGEKGKKLREKAEEWRRLAEEATRYKHGSSVMNLETLIHKV 481
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
| >sp|Q9SBL1|HMNGT_SORBI Cyanohydrin beta-glucosyltransferase OS=Sorghum bicolor GN=UGT85B1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 228 bits (581), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 158/489 (32%), Positives = 252/489 (51%), Gaps = 39/489 (7%)
Query: 5 PHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKA----EDSSS 60
PHV+++P+P QGHVAPLM+LA + R +VT V TQ+ +++++ + E A SS+
Sbjct: 11 PHVVLVPFPGQGHVAPLMQLARLLHARGARVTFVYTQYNYRRLLRAKGEAAVRPPATSSA 70
Query: 61 QIKLVTIPDGLELQAADREDPLKLGESVARAMRGCL---RDLIEKINQ---SNDCEPIRC 114
+ ++ I DGL L + +G V + CL R L+ ++ Q D P+ C
Sbjct: 71 RFRIEVIDDGLSLSVPQND----VGGLVDSLRKNCLHPFRALLRRLGQEVEGQDAPPVTC 126
Query: 115 VIADVTVGSALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGIIDPNGFAIL--NDG 172
V+ DV + A A GI L L + +L+E G++ ++L +D
Sbjct: 127 VVGDVVMTFAAAAAREAGIPEVQFFTASACGLLGYLHYGELVERGLVPFRDASLLADDDY 186
Query: 173 LISLSDEIPAWK----RNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELD 228
L + + +P R+ T+ +P + +++ +++ S +I N++YEL+
Sbjct: 187 LDTPLEWVPGMSHMRLRDMPTFCRTTDPDD--VMVSATLQQMESAAGSKALILNTLYELE 244
Query: 229 SPACD----LIPNILPIGPL---LASNHSGD-----LDGNFWSEDSSCLSWLDEQAIRSV 276
D P I +GPL +AS+ S +D + W ED+ CLSWLD + SV
Sbjct: 245 KDVVDALAAFFPPIYTVGPLAEVIASSDSASAGLAAMDISIWQEDTRCLSWLDGKPAGSV 304
Query: 277 VYVAFGSVAVLSQQQFAELALGLESLQKPFLWVIRQDFMNGSRAKFPDGFIERVS-NRGK 335
VYV FGS+AV++ Q E ALGL S PFLWV R D + G P+ ++ V+ RG
Sbjct: 305 VYVNFGSMAVMTAAQAREFALGLASCGSPFLWVKRPDVVEGEEVLLPEALLDEVARGRGL 364
Query: 336 IVEWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKI 395
+V W PQ VL H++V F+SHCGWNS +E + G P L WP +Q N +CE W
Sbjct: 365 VVPWCPQAAVLKHAAVGLFVSHCGWNSLLEATAAGQPVLAWPCHGEQTTNCRQLCEVWGN 424
Query: 396 GLQFFAD-ENGIITRQEIQRKVLTLLKNDDIRSNSLKLKEVARKSLLGGGSSFRNFESFI 454
G Q + E+G + R + R+++ + R+ + + K A + GG+S+RN E +
Sbjct: 425 GAQLPREVESGAVAR--LVREMMVGDLGKEKRAKAAEWKAAAEAAARKGGASWRNVERVV 482
Query: 455 SDIKMLISG 463
+D+ +L+ G
Sbjct: 483 NDL-LLVGG 490
|
Involved in the biosynthesis of the cyanogenic glucoside dhurrin. Prevents the disocciation and release of toxic hydrogen cyanide. Mandelonitrile, p-hydroxymandelonitrile, benzyl alcohol, benzoic acid and geraniol, but not hydroquinone(1,4-benzenediol), alpha-terpinol, linalool or farnesol are utilized as acceptor substrates. UDP-glucose, but not UDP-xylose or UDP-glucuronic acid can be used as sugar donor. Sorghum bicolor (taxid: 4558) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 8 EC: 5 |
| >sp|P0C7P7|U74E1_ARATH UDP-glycosyltransferase 74E1 OS=Arabidopsis thaliana GN=UGT74E1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 220 bits (560), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 144/469 (30%), Positives = 247/469 (52%), Gaps = 33/469 (7%)
Query: 1 MSRQPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSS 60
M HV+V+P+PAQGH+ P+ + ++A +++K+T+V + K S K E +
Sbjct: 1 MREGSHVIVLPFPAQGHITPMSQFCKRLASKSLKITLV---LVSDK--PSPPYKTEHDT- 54
Query: 61 QIKLVTIPDGLELQAADREDPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVT 120
I +V I +G + ED + E V +++ L LIE + S + P R ++ D T
Sbjct: 55 -ITVVPISNGFQEGQERSEDLDEYMERVESSIKNRLPKLIEDMKLSGN--PPRALVYDST 111
Query: 121 VGSALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGIIDPNGFAILNDGLISLSDEI 180
+ L+VA S G++ A F +S + + + P+ ++ +
Sbjct: 112 MPWLLDVAHSYGLSGAV---FFTQPWLVSAIYYHVFKGSFSVPS--TKYGHSTLASFPSL 166
Query: 181 PAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACDLIPNILP 240
P N+ SF E S +L + + + + ++ N+ +L+ I ++ P
Sbjct: 167 PILNANDLP-SFLCESSSYPYILRTVIDQLSNIDRVDIVLCNTFDKLEEKLLKWIKSVWP 225
Query: 241 ---IGPLLASNHSGDL---DGN-----FWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQ 289
IGP + S + D N F ++ + C+ WL+ + SVVYV+FGS+ VL +
Sbjct: 226 VLNIGPTVPSMYLDKRLAEDKNYGFSLFGAKIAECMEWLNSKQPSSVVYVSFGSLVVLKK 285
Query: 290 QQFAELALGLESLQKPFLWVIRQDFMNGSRAKFPDGFIERVSNRGKIVEWAPQEKVLGHS 349
Q ELA GL+ FLWV+R+ R K P+ +IE + +G V W+PQ +VL H
Sbjct: 286 DQLIELAAGLKQSGHFFLWVVRET----ERRKLPENYIEEIGEKGLTVSWSPQLEVLTHK 341
Query: 350 SVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGIITR 409
S+ CF++HCGWNST+EGLS+GVP + P+++DQ N ++ + WK+G++ AD +G + R
Sbjct: 342 SIGCFVTHCGWNSTLEGLSLGVPMIGMPHWADQPTNAKFMEDVWKVGVRVKADSDGFVRR 401
Query: 410 QEIQRKVLTLLKND---DIRSNSLKLKEVARKSLLGGGSSFRNFESFIS 455
+E R+V +++ + +IR N+ K K +A++++ GGSS +N F+S
Sbjct: 402 EEFVRRVEEVMEAEQGKEIRKNAEKWKVLAQEAVSEGGSSDKNINEFVS 450
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
| >sp|Q9SJL0|U86A1_ARATH UDP-glycosyltransferase 86A1 OS=Arabidopsis thaliana GN=UGT86A1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 216 bits (551), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 140/481 (29%), Positives = 242/481 (50%), Gaps = 33/481 (6%)
Query: 2 SRQPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAED---- 57
SR+PH+++IPYP QGHV P + LA K+A +T VNT IH I + Q+ A D
Sbjct: 6 SRKPHIMMIPYPLQGHVIPFVHLAIKLASHGFTITFVNTDSIHHHISTAHQDDAGDIFSA 65
Query: 58 --SSSQ--IKLVTIPDGLELQAADREDPLKLGESVARAMRGCLRDLIEKINQSNDCEPIR 113
SS Q I+ T+ DG L + + E + + DLI K+++ +D P+
Sbjct: 66 ARSSGQHDIRYTTVSDGFPLDFDRSLNHDQFFEGILHVFSAHVDDLIAKLSRRDD-PPVT 124
Query: 114 CVIADVTVGSALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGIIDPNGFAILNDGL 173
C+IAD + + + + + + +L L+L + ++ NG D
Sbjct: 125 CLIADTFYVWSSMICDKHNLVNVSF--WTEPALVLNLYY----HMDLLISNGHFKSLDNR 178
Query: 174 ISLSDEIPAWKRNE------YTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYEL 227
+ D +P K E Y + ++ I+ + VK +++++ N+V EL
Sbjct: 179 KDVIDYVPGVKAIEPKDLMSYLQVSDKDVDTNTVVYRILFKAFKDVKRADFVVCNTVQEL 238
Query: 228 DSPACDLIPNILP---IGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSV 284
+ + + P IGP+ +++ + + W+E S C WL + SV+YV+FGS
Sbjct: 239 EPDSLSALQAKQPVYAIGPVFSTDSV--VPTSLWAE-SDCTEWLKGRPTGSVLYVSFGSY 295
Query: 285 AVLSQQQFAELALGLESLQKPFLWVIRQDFMNGSRAKF-PDGFIERVSNRGKIVEWAPQE 343
A + +++ E+A GL F+WV+R D + + F P GF+++ +RG +V+W Q
Sbjct: 296 AHVGKKEIVEIAHGLLLSGISFIWVLRPDIVGSNVPDFLPAGFVDQAQDRGLVVQWCCQM 355
Query: 344 KVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADE 403
+V+ + +V F +HCGWNS +E + G+P LC+P +DQ+ NR + + W IG+ E
Sbjct: 356 EVISNPAVGGFFTHCGWNSILESVWCGLPLLCYPLLTDQFTNRKLVVDDWCIGINLC--E 413
Query: 404 NGIITRQEIQRKVLTLLKND---DIRSNSLKLKEVARKSLLGGGSSFRNFESFISDIKML 460
ITR ++ V L+ + ++R+N K+K + ++ GSS NF F+S+++
Sbjct: 414 KKTITRDQVSANVKRLMNGETSSELRNNVEKVKRHLKDAVTTVGSSETNFNLFVSEVRNR 473
Query: 461 I 461
I
Sbjct: 474 I 474
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 468 | ||||||
| 359491659 | 457 | PREDICTED: UDP-glycosyltransferase 83A1- | 0.974 | 0.997 | 0.582 | 1e-161 | |
| 225457267 | 456 | PREDICTED: UDP-glycosyltransferase 83A1 | 0.967 | 0.993 | 0.597 | 1e-160 | |
| 297733895 | 745 | unnamed protein product [Vitis vinifera] | 0.974 | 0.612 | 0.582 | 1e-160 | |
| 225457271 | 462 | PREDICTED: UDP-glycosyltransferase 83A1- | 0.974 | 0.987 | 0.585 | 1e-159 | |
| 225457255 | 456 | PREDICTED: UDP-glycosyltransferase 83A1 | 0.972 | 0.997 | 0.598 | 1e-157 | |
| 147802898 | 456 | hypothetical protein VITISV_022262 [Viti | 0.967 | 0.993 | 0.571 | 1e-156 | |
| 225457265 | 455 | PREDICTED: UDP-glycosyltransferase 83A1 | 0.965 | 0.993 | 0.569 | 1e-155 | |
| 359491655 | 457 | PREDICTED: UDP-glycosyltransferase 83A1- | 0.972 | 0.995 | 0.570 | 1e-150 | |
| 225457259 | 458 | PREDICTED: UDP-glycosyltransferase 83A1 | 0.974 | 0.995 | 0.559 | 1e-147 | |
| 255547243 | 459 | UDP-glucuronosyltransferase, putative [R | 0.972 | 0.991 | 0.548 | 1e-142 |
| >gi|359491659|ref|XP_002281210.2| PREDICTED: UDP-glycosyltransferase 83A1-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 573 bits (1476), Expect = e-161, Method: Compositional matrix adjust.
Identities = 267/458 (58%), Positives = 351/458 (76%), Gaps = 2/458 (0%)
Query: 1 MSRQPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSS 60
M R+PHVL+IP+PAQGHVAPLMK A +I++ IKVT VN+ FIH+K++A+L ++ E + S
Sbjct: 1 MGRRPHVLIIPFPAQGHVAPLMKFAYQISDHGIKVTFVNSDFIHEKLVAALPDEDE-ARS 59
Query: 61 QIKLVTIPDGLELQAADREDPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVT 120
+I L +IPDGL DR+D LKL +S+ R M G L++ +EK+N SND E I CVIAD
Sbjct: 60 RIGLASIPDGLG-PGEDRKDSLKLTDSIFRVMPGHLKEFMEKVNNSNDDEKITCVIADSA 118
Query: 121 VGSALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGIIDPNGFAILNDGLISLSDEI 180
G ALEVA+ MGI R A PFGPGSLAL+ P+L+EAG+++ ++LND LI L+ +I
Sbjct: 119 FGWALEVADKMGIKRVAFCPFGPGSLALAFHIPRLIEAGLLNSTDGSLLNDELICLAKDI 178
Query: 181 PAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACDLIPNILP 240
PA+ N WS P +P+ Q+++ + I A+ +SNW+I NSVYELDS ACDLIPNILP
Sbjct: 179 PAFSSNRLPWSCPSDPTLQEVIFRLAFKDISAINLSNWLICNSVYELDSSACDLIPNILP 238
Query: 241 IGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALGLE 300
IGPL+A+NH G GNFW EDS+C+SWLD+Q SV+YVAFGS+A+LSQ QF ELALG+E
Sbjct: 239 IGPLIANNHLGHYPGNFWPEDSTCISWLDKQPAGSVIYVAFGSLAILSQHQFNELALGIE 298
Query: 301 SLQKPFLWVIRQDFMNGSRAKFPDGFIERVSNRGKIVEWAPQEKVLGHSSVACFISHCGW 360
+ +PFLWV+R DF NGS A++PDGFIERV+ GKIV WAPQEKVL H SVACF+SHCGW
Sbjct: 299 LVGRPFLWVVRSDFTNGSDAEYPDGFIERVAENGKIVSWAPQEKVLAHPSVACFLSHCGW 358
Query: 361 NSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGIITRQEIQRKVLTLL 420
NSTM+G+ MGVPFLCWPY DQ+ N++YIC+ WK+GL DENG I+R EI++K+ L+
Sbjct: 359 NSTMDGIGMGVPFLCWPYVVDQFHNQSYICDKWKVGLGLNPDENGFISRHEIKKKIEMLV 418
Query: 421 KNDDIRSNSLKLKEVARKSLLGGGSSFRNFESFISDIK 458
+D I++N+ KLKE+ RKS+ GGSS++NF++F+ +K
Sbjct: 419 SDDVIKANAEKLKEMTRKSVSEGGSSYKNFQTFVEVMK 456
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225457267|ref|XP_002284350.1| PREDICTED: UDP-glycosyltransferase 83A1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 572 bits (1475), Expect = e-160, Method: Compositional matrix adjust.
Identities = 272/455 (59%), Positives = 350/455 (76%), Gaps = 2/455 (0%)
Query: 4 QPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIK 63
+PHVL+IP PAQGHV PLMK A +I++ IKVT VN+ FIH+K++A+L ++ E + S+I
Sbjct: 3 RPHVLIIPCPAQGHVTPLMKFAYQISDHGIKVTFVNSDFIHEKLVAALPDEDE-AQSRIG 61
Query: 64 LVTIPDGLELQAADREDPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVGS 123
L +IPDGL DR+D LK +S+ R M G L++LIEK+N SND E I CVIAD TVG
Sbjct: 62 LASIPDGLG-PGEDRKDLLKSTDSMLRVMPGHLKELIEKVNNSNDDEKITCVIADTTVGW 120
Query: 124 ALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGIIDPNGFAILNDGLISLSDEIPAW 183
ALEVAE MGI A P GPGSLAL P+L+EAG ++ ++LND LISL+ +IPA+
Sbjct: 121 ALEVAEKMGIKSVAFCPCGPGSLALLFHIPRLIEAGHVNGIDGSLLNDELISLAKDIPAF 180
Query: 184 KRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACDLIPNILPIGP 243
N+ WS P +P+ QK++ I A+ +SNW++ NSVYELDS ACDLIPNILPIGP
Sbjct: 181 SSNKLPWSCPSDPNLQKVIFQFAFKDISAMNLSNWLLCNSVYELDSSACDLIPNILPIGP 240
Query: 244 LLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALGLESLQ 303
LLASNH G GNFW EDS+C+SWLD+Q SV+YVAFGSVA+LSQ QF ELALG+E +
Sbjct: 241 LLASNHLGHYTGNFWPEDSTCISWLDKQPAGSVIYVAFGSVAILSQNQFNELALGIELVG 300
Query: 304 KPFLWVIRQDFMNGSRAKFPDGFIERVSNRGKIVEWAPQEKVLGHSSVACFISHCGWNST 363
+PFLWV+R DF NGS A++PDGFIERV+ GKIV WAPQEKVL H SVACF+SHCGWNST
Sbjct: 301 RPFLWVVRSDFTNGSAAEYPDGFIERVAEHGKIVSWAPQEKVLAHPSVACFLSHCGWNST 360
Query: 364 MEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGIITRQEIQRKVLTLLKND 423
M+G+ MGVPFLCWPYF+DQ+ N++YIC+ WK+GL DENG I+R EI++K+ L+ +D
Sbjct: 361 MDGIGMGVPFLCWPYFADQFHNQSYICDKWKVGLGLNPDENGFISRHEIKKKIEMLVSDD 420
Query: 424 DIRSNSLKLKEVARKSLLGGGSSFRNFESFISDIK 458
I++N+ KLKE+ARKS++ GGSS++NF++F+ +K
Sbjct: 421 GIKANAEKLKEMARKSVIEGGSSYKNFQTFVEALK 455
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297733895|emb|CBI15142.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust.
Identities = 267/458 (58%), Positives = 351/458 (76%), Gaps = 2/458 (0%)
Query: 1 MSRQPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSS 60
M R+PHVL+IP+PAQGHVAPLMK A +I++ IKVT VN+ FIH+K++A+L ++ E + S
Sbjct: 289 MGRRPHVLIIPFPAQGHVAPLMKFAYQISDHGIKVTFVNSDFIHEKLVAALPDEDE-ARS 347
Query: 61 QIKLVTIPDGLELQAADREDPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVT 120
+I L +IPDGL DR+D LKL +S+ R M G L++ +EK+N SND E I CVIAD
Sbjct: 348 RIGLASIPDGLG-PGEDRKDSLKLTDSIFRVMPGHLKEFMEKVNNSNDDEKITCVIADSA 406
Query: 121 VGSALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGIIDPNGFAILNDGLISLSDEI 180
G ALEVA+ MGI R A PFGPGSLAL+ P+L+EAG+++ ++LND LI L+ +I
Sbjct: 407 FGWALEVADKMGIKRVAFCPFGPGSLALAFHIPRLIEAGLLNSTDGSLLNDELICLAKDI 466
Query: 181 PAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACDLIPNILP 240
PA+ N WS P +P+ Q+++ + I A+ +SNW+I NSVYELDS ACDLIPNILP
Sbjct: 467 PAFSSNRLPWSCPSDPTLQEVIFRLAFKDISAINLSNWLICNSVYELDSSACDLIPNILP 526
Query: 241 IGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALGLE 300
IGPL+A+NH G GNFW EDS+C+SWLD+Q SV+YVAFGS+A+LSQ QF ELALG+E
Sbjct: 527 IGPLIANNHLGHYPGNFWPEDSTCISWLDKQPAGSVIYVAFGSLAILSQHQFNELALGIE 586
Query: 301 SLQKPFLWVIRQDFMNGSRAKFPDGFIERVSNRGKIVEWAPQEKVLGHSSVACFISHCGW 360
+ +PFLWV+R DF NGS A++PDGFIERV+ GKIV WAPQEKVL H SVACF+SHCGW
Sbjct: 587 LVGRPFLWVVRSDFTNGSDAEYPDGFIERVAENGKIVSWAPQEKVLAHPSVACFLSHCGW 646
Query: 361 NSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGIITRQEIQRKVLTLL 420
NSTM+G+ MGVPFLCWPY DQ+ N++YIC+ WK+GL DENG I+R EI++K+ L+
Sbjct: 647 NSTMDGIGMGVPFLCWPYVVDQFHNQSYICDKWKVGLGLNPDENGFISRHEIKKKIEMLV 706
Query: 421 KNDDIRSNSLKLKEVARKSLLGGGSSFRNFESFISDIK 458
+D I++N+ KLKE+ RKS+ GGSS++NF++F+ +K
Sbjct: 707 SDDVIKANAEKLKEMTRKSVSEGGSSYKNFQTFVEVMK 744
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225457271|ref|XP_002284355.1| PREDICTED: UDP-glycosyltransferase 83A1-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 568 bits (1465), Expect = e-159, Method: Compositional matrix adjust.
Identities = 268/458 (58%), Positives = 349/458 (76%), Gaps = 2/458 (0%)
Query: 1 MSRQPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSS 60
M R+PHVL+IP+PAQGHV PLMK A +I++ IKVT VN+ FIH+K++A+L ++ E + S
Sbjct: 6 MGRRPHVLIIPFPAQGHVTPLMKFAYQISDHGIKVTFVNSDFIHEKLVAALPDEDE-ARS 64
Query: 61 QIKLVTIPDGLELQAADREDPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVT 120
+I L +IPDGL DR+DPLK +S+ R M G L++LIEK+N SND E I CVIAD T
Sbjct: 65 RIGLASIPDGLG-PGEDRKDPLKSTDSILRVMPGHLKELIEKVNNSNDDEKITCVIADTT 123
Query: 121 VGSALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGIIDPNGFAILNDGLISLSDEI 180
VG ALEVAE MGI A P GPG+LAL P+L+EAG ++ ++LN+ LI L+ +I
Sbjct: 124 VGWALEVAEKMGIESVAFCPCGPGTLALVFDIPRLIEAGHVNGIDGSLLNEELICLAKDI 183
Query: 181 PAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACDLIPNILP 240
PA+ N W P + + Q+IL + I A +SNW++ NSVYELDS ACDLIPNILP
Sbjct: 184 PAFSSNRLPWGCPSDLTVQEILFRLALQCIPAKNLSNWLLCNSVYELDSSACDLIPNILP 243
Query: 241 IGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALGLE 300
IGPLLASNH G GNFW EDS+C+ WLD+Q SV+YVAFGS+A+LSQ QF ELALG+E
Sbjct: 244 IGPLLASNHLGHYTGNFWPEDSTCIGWLDKQPAGSVIYVAFGSLAILSQNQFNELALGIE 303
Query: 301 SLQKPFLWVIRQDFMNGSRAKFPDGFIERVSNRGKIVEWAPQEKVLGHSSVACFISHCGW 360
+ +PFLWV+R DF NGS A++PDGFIERV+ GKIV WAPQEKVL H SVACF+SHCGW
Sbjct: 304 LVGRPFLWVVRSDFTNGSAAEYPDGFIERVAEHGKIVSWAPQEKVLAHPSVACFLSHCGW 363
Query: 361 NSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGIITRQEIQRKVLTLL 420
NSTM+G+ +GVPFLCWPYF+DQ+ N++YIC+ WK+GL DENG I+R EI++K+ L+
Sbjct: 364 NSTMDGIGIGVPFLCWPYFADQFHNQSYICDKWKVGLGLNPDENGFISRHEIKKKIEMLV 423
Query: 421 KNDDIRSNSLKLKEVARKSLLGGGSSFRNFESFISDIK 458
+D I++N+ KLKE+ARKS++ GGSS++NF++F+ +K
Sbjct: 424 SDDGIKANAEKLKEMARKSVIEGGSSYKNFQTFVEALK 461
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225457255|ref|XP_002281128.1| PREDICTED: UDP-glycosyltransferase 83A1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 562 bits (1449), Expect = e-157, Method: Compositional matrix adjust.
Identities = 274/458 (59%), Positives = 351/458 (76%), Gaps = 3/458 (0%)
Query: 1 MSRQPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSS 60
M R+PHVLV+P+PAQGHVAPLMKLA K+++ IKVT VNT+FIH KI+AS+ +K + S
Sbjct: 1 MGRRPHVLVVPFPAQGHVAPLMKLAHKVSDHGIKVTFVNTEFIHAKIMASMPDK-DGKQS 59
Query: 61 QIKLVTIPDGLELQAADREDPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVT 120
+I+LV++PDGL +A +R D + L ES+ M G ++DLIEKIN++ND E I CVIAD T
Sbjct: 60 RIELVSVPDGLNPEA-NRNDAVMLTESILTVMPGHVKDLIEKINRTNDDEKITCVIADTT 118
Query: 121 VGSALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGIIDPNGFAILNDGLISLSDEI 180
VG ALEVAE MGI RAAV P GPG LAL+L PKL+EA IID +G + N+ LI L+++I
Sbjct: 119 VGWALEVAEKMGIKRAAVWPGGPGDLALALHIPKLIEARIIDTDGAPMKNE-LIHLAEDI 177
Query: 181 PAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACDLIPNILP 240
PA+ +W+ D+P + ++ G V Q VK+SNW++ NS YEL S AC+LI +ILP
Sbjct: 178 PAFSITGLSWNLSDDPKIRDVIFGYAFRVSQTVKLSNWLLCNSFYELHSSACNLISDILP 237
Query: 241 IGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALGLE 300
IGPLLASNH GNFW+EDS+CL WLD+Q SV+YVAFGS+A+LSQ QF ELALG+E
Sbjct: 238 IGPLLASNHPAHSAGNFWAEDSTCLRWLDKQPAGSVIYVAFGSLAILSQHQFNELALGIE 297
Query: 301 SLQKPFLWVIRQDFMNGSRAKFPDGFIERVSNRGKIVEWAPQEKVLGHSSVACFISHCGW 360
+ +PFLWV R DF NGS ++PDGF++RVS GKIVEWA QEKVL H SVACF+SHCGW
Sbjct: 298 LVGRPFLWVARSDFTNGSAVEYPDGFMQRVSEYGKIVEWADQEKVLAHPSVACFLSHCGW 357
Query: 361 NSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGIITRQEIQRKVLTLL 420
NSTMEG+SMGVPFLCWP F+DQ+ NRN+IC+ WK+GL D NGII+R EI+ K+ LL
Sbjct: 358 NSTMEGVSMGVPFLCWPQFADQFCNRNFICDIWKVGLGLDPDGNGIISRHEIKIKIEKLL 417
Query: 421 KNDDIRSNSLKLKEVARKSLLGGGSSFRNFESFISDIK 458
+D I++N+LKLKE+AR+S+ GSS +NF++FI +K
Sbjct: 418 SDDGIKANALKLKEMARESVSEDGSSSKNFKAFIEAVK 455
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147802898|emb|CAN66174.1| hypothetical protein VITISV_022262 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 557 bits (1435), Expect = e-156, Method: Compositional matrix adjust.
Identities = 260/455 (57%), Positives = 349/455 (76%), Gaps = 2/455 (0%)
Query: 4 QPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIK 63
+PHVL+IP+PAQGHV PLMK A +I+ IKVT VN+ FIH+K++A+L ++ E + S+I
Sbjct: 3 RPHVLIIPFPAQGHVTPLMKFAYQISIHGIKVTFVNSDFIHEKLVAALPDEDE-ARSRIG 61
Query: 64 LVTIPDGLELQAADREDPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVGS 123
L +IPDGL DR+D LKL +S+ R M G L++LIEK+N SND E I CVIAD G
Sbjct: 62 LASIPDGLG-PGEDRKDSLKLTDSILRVMPGHLKELIEKVNNSNDDEKITCVIADSAFGW 120
Query: 124 ALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGIIDPNGFAILNDGLISLSDEIPAW 183
ALEVA+ MGI R A PFGPGSLAL+ P+L+EAG+++ ++LN LI L+ +IPA+
Sbjct: 121 ALEVADKMGIKRVAFCPFGPGSLALAFHIPRLIEAGLLNSTDGSLLNHELICLAKDIPAF 180
Query: 184 KRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACDLIPNILPIGP 243
N WS P +P+ Q+I + IQ + +SNW+++NSVYELDS AC+LIPNIL IGP
Sbjct: 181 ISNRLPWSCPTDPTVQEICFRLAFKAIQVMNLSNWLLSNSVYELDSSACELIPNILSIGP 240
Query: 244 LLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALGLESLQ 303
LLAS+H G GNFW EDS+C+ WLD+Q SV+YVAFGS+A+ +Q+QF ELALGLE +
Sbjct: 241 LLASHHLGHYAGNFWPEDSTCIGWLDKQPAGSVIYVAFGSLAIFNQRQFNELALGLELVG 300
Query: 304 KPFLWVIRQDFMNGSRAKFPDGFIERVSNRGKIVEWAPQEKVLGHSSVACFISHCGWNST 363
+PF+WV+R DF +GS A++PDGFI RV+ GKIV WAPQE+VL H SVACF+SHCGWNST
Sbjct: 301 RPFIWVVRSDFADGSVAEYPDGFIGRVAENGKIVSWAPQEEVLDHPSVACFLSHCGWNST 360
Query: 364 MEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGIITRQEIQRKVLTLLKND 423
M+G+ MGVPFLCWPYF+DQ+ N++YIC+ WK+GL DENG I+R+EI++K+ L+ +D
Sbjct: 361 MDGIGMGVPFLCWPYFADQFHNQSYICDKWKVGLGLNPDENGFISRREIKKKIEKLVSDD 420
Query: 424 DIRSNSLKLKEVARKSLLGGGSSFRNFESFISDIK 458
I++N+ KLKE+ARKS++ GGSS++NF++F+ +K
Sbjct: 421 GIKANAEKLKEMARKSVIEGGSSYKNFQTFVEALK 455
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225457265|ref|XP_002281262.1| PREDICTED: UDP-glycosyltransferase 83A1 [Vitis vinifera] gi|147822731|emb|CAN70537.1| hypothetical protein VITISV_040069 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 553 bits (1426), Expect = e-155, Method: Compositional matrix adjust.
Identities = 259/455 (56%), Positives = 346/455 (76%), Gaps = 3/455 (0%)
Query: 4 QPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIK 63
+PHVL+IP+PAQGHV P MK A +I++ IKVT VN+ FIH+K++A+L ++ E + S+I
Sbjct: 3 RPHVLIIPFPAQGHVTPFMKFAYQISDHGIKVTFVNSDFIHEKLVAALPDEDE-ARSRIG 61
Query: 64 LVTIPDGLELQAADREDPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVGS 123
L +IPDGL DR+D LKL +S+ R M G L++LIEK+N SND E I CVIAD G
Sbjct: 62 LASIPDGLG-PGEDRKDSLKLTDSILRVMPGHLKELIEKVNNSNDDEKITCVIADSAFGW 120
Query: 124 ALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGIIDPNGFAILNDGLISLSDEIPAW 183
ALEVA+ MGI R A PFGPGSLAL+ P+L+EAG+++ ++LN I L+ +IPA+
Sbjct: 121 ALEVADKMGIKRVAFCPFGPGSLALAFHIPRLIEAGLLNTTDGSLLNHEFICLAKDIPAF 180
Query: 184 KRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACDLIPNILPIGP 243
N WS P +P+ Q+I + IQ + +SNW+++NSVYELDS AC+LIPNIL IGP
Sbjct: 181 ISNRLPWSCPTDPTLQEICFRLAFKAIQVMNLSNWLLSNSVYELDSSACELIPNILSIGP 240
Query: 244 LLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALGLESLQ 303
LLAS+H G GNFW EDS+C+ WLD+Q SV+YVAFGS+A+ +Q+QF ELALGLE +
Sbjct: 241 LLASHHLGHYAGNFWHEDSTCIGWLDKQPAGSVIYVAFGSLAIFNQRQFNELALGLELVG 300
Query: 304 KPFLWVIRQDFMNGSRAKFPDGFIERVSNRGKIVEWAPQEKVLGHSSVACFISHCGWNST 363
+PFLWV+R DF +GS A++PD FIERV+ GKIV WAPQEKVL H SVACF+SHCGWNST
Sbjct: 301 RPFLWVVRSDFADGSVAEYPD-FIERVAENGKIVSWAPQEKVLAHPSVACFLSHCGWNST 359
Query: 364 MEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGIITRQEIQRKVLTLLKND 423
M+ + MGVPFLCWPYF+DQ+ N++YIC+ WK+GL DENG I+R EI++K+ L+ +D
Sbjct: 360 MDAIGMGVPFLCWPYFADQFHNQSYICDKWKVGLGLNPDENGFISRHEIKKKIEKLVSDD 419
Query: 424 DIRSNSLKLKEVARKSLLGGGSSFRNFESFISDIK 458
I++N+ KLKE+ARKS++ GGSS++NF++F+ +K
Sbjct: 420 GIKANAEKLKEMARKSVIEGGSSYKNFQTFVEALK 454
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359491655|ref|XP_002281171.2| PREDICTED: UDP-glycosyltransferase 83A1-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 262/459 (57%), Positives = 343/459 (74%), Gaps = 4/459 (0%)
Query: 1 MSRQPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSS 60
M R+PHVL+IP PAQGHVAPLMKLA +I++ IKVT VN+ FIH K++A+L +AE + S
Sbjct: 1 MGRRPHVLIIPLPAQGHVAPLMKLAHRISDHGIKVTFVNSDFIHAKLLAALPHEAE-ARS 59
Query: 61 QIKLVTIPDGLELQAADREDPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVT 120
I L +IPDGL+ DR+D KL ES++R M L+DLIEK+N+SND E I CV+AD+T
Sbjct: 60 GIGLASIPDGLD-PGDDRKDLPKLTESISRVMPSHLKDLIEKVNRSNDDEQIICVVADIT 118
Query: 121 VGS-ALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGIIDPNGFAILNDGLISLSDE 179
+G A+EVAE MGI P GP LAL+L PKL+EA I+D +G + LND LI LS +
Sbjct: 119 LGWWAMEVAEKMGILGVPFFPSGPEILALALHIPKLIEARILDADG-SPLNDELICLSKD 177
Query: 180 IPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACDLIPNIL 239
IP + N W P +P Q+ + + +IQ + S W+++N VYELDS AC+LIPNIL
Sbjct: 178 IPVFSSNRLPWCCPIDPKIQETIFRTLLIIIQKMDFSKWLLSNFVYELDSSACELIPNIL 237
Query: 240 PIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALGL 299
IGPLLAS+H G GNFW EDS+C+ WLD+Q SV+YVAFGS+A+ +Q+QF ELALGL
Sbjct: 238 SIGPLLASHHLGHYAGNFWPEDSTCIGWLDKQPAGSVIYVAFGSLAIFNQRQFNELALGL 297
Query: 300 ESLQKPFLWVIRQDFMNGSRAKFPDGFIERVSNRGKIVEWAPQEKVLGHSSVACFISHCG 359
E + +PFLWV+R DF +GS A++PDGFIERV++ GKIV WAPQE+VL H SVACF SHCG
Sbjct: 298 ELVGRPFLWVVRSDFTDGSVAEYPDGFIERVADHGKIVSWAPQEEVLAHPSVACFFSHCG 357
Query: 360 WNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGIITRQEIQRKVLTL 419
WNSTM+ +SMGVPFLCWPYF+DQ+ N++YIC+ WK+GL DE G I+R I+ K+ L
Sbjct: 358 WNSTMDSISMGVPFLCWPYFADQFHNQSYICKKWKVGLGLNPDEKGFISRHGIKMKIEKL 417
Query: 420 LKNDDIRSNSLKLKEVARKSLLGGGSSFRNFESFISDIK 458
+ +D I++N+ KLKE+ARKS+ GGSS++NF++FI +K
Sbjct: 418 VSDDGIKANAKKLKEMARKSVSEGGSSYKNFKTFIEAMK 456
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225457259|ref|XP_002281187.1| PREDICTED: UDP-glycosyltransferase 83A1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 527 bits (1357), Expect = e-147, Method: Compositional matrix adjust.
Identities = 257/459 (55%), Positives = 331/459 (72%), Gaps = 3/459 (0%)
Query: 1 MSRQPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSS 60
M R+PHVL+IP PAQGHVAPLMKLA +I++ IKVT VN+ FIH K++A+L +AE + S
Sbjct: 1 MGRRPHVLIIPLPAQGHVAPLMKLAHRISDHGIKVTFVNSDFIHAKLLAALPHEAE-ARS 59
Query: 61 QIKLVTIPDGLELQAADREDPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVT 120
I L +IPDGL+ DR++ LKL ES++R M G L+DLIEK+N SND E I CVIAD+T
Sbjct: 60 GIGLASIPDGLD-PGDDRKNMLKLTESISRVMPGHLKDLIEKVNHSNDDEQITCVIADIT 118
Query: 121 VGS-ALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGIIDPNGFAILNDGLISLSDE 179
+ +EVAE MGI P G G AL+L PKL+EAGI++ + LND LI +S
Sbjct: 119 LERWPMEVAEKMGIEGVPFCPMGAGIWALALHIPKLIEAGIVNSTDGSPLNDELICVSKG 178
Query: 180 IPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACDLIPNIL 239
IP N W +P + Q+ + + IQ + S W++ N VYELDS ACDLIPN+L
Sbjct: 179 IPVLSSNSLPWQWPIDLKIQESVFRLYLTSIQIMDSSKWLLCNCVYELDSSACDLIPNLL 238
Query: 240 PIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALGL 299
PIGPLLAS+ G NFW EDS+C+ WLD+Q SV+YVAFGS +L+Q QF ELALG+
Sbjct: 239 PIGPLLASSDPGHYAANFWPEDSTCIGWLDKQPAGSVIYVAFGSFTILTQHQFNELALGI 298
Query: 300 ESLQKPFLWVIRQDFMNGSRAKFPDGFIERVSNRGKIVEWAPQEKVLGHSSVACFISHCG 359
E + +PFLWV+R DF + S A++PDGFIERV++ GKIV WAPQE+VL H SVACF SHCG
Sbjct: 299 ELVGRPFLWVVRSDFTDESAAEYPDGFIERVADHGKIVSWAPQEEVLAHPSVACFFSHCG 358
Query: 360 WNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGIITRQEIQRKVLTL 419
WNSTM G+ MGVPFLCWPY DQ+ N++YICE WK+GL D+NG I+R EI+ K+ L
Sbjct: 359 WNSTMGGIGMGVPFLCWPYLGDQFHNQSYICEKWKVGLGLNPDKNGFISRHEIKMKIEKL 418
Query: 420 LKNDDIRSNSLKLKEVARKSLLGGGSSFRNFESFISDIK 458
+ +D I++N+ KLKE+ARKS+ GGSS+RNF++FI +K
Sbjct: 419 VSDDGIKANAEKLKEMARKSVSEGGSSYRNFKTFIEAMK 457
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255547243|ref|XP_002514679.1| UDP-glucuronosyltransferase, putative [Ricinus communis] gi|223546283|gb|EEF47785.1| UDP-glucuronosyltransferase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 253/461 (54%), Positives = 328/461 (71%), Gaps = 6/461 (1%)
Query: 1 MSRQPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSS 60
M ++PHV+VIPYPAQGHVAPLMKLA K+A+ IKVT VN++ IH +I+A++ E E+
Sbjct: 1 MEKKPHVIVIPYPAQGHVAPLMKLAYKLADHGIKVTFVNSESIHGRIMAAMPENLEEKIP 60
Query: 61 QIKLVTIPDGLELQAADREDPLKLGESVARAMRGCLRDLIEKINQS-NDCEPIRCVIADV 119
I L++I DG+E DR+D +K +S++ +M G L+ LIE +NQS N + + CVIAD+
Sbjct: 61 -ISLISISDGVE-SNRDRKDRIKKLKSISSSMPGNLQKLIESLNQSANHDDQVSCVIADL 118
Query: 120 TVGSALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGIIDPNGFAILNDGLISLSDE 179
T+ ALEVA+ MGI RA V+P+G G+LAL L PKL+E GIID +G L D +I L+
Sbjct: 119 TLKGALEVAKKMGIKRAGVLPYGVGNLALQLHAPKLIEDGIIDADGMP-LKDEVICLAKT 177
Query: 180 IPAWKRNEYTWSFPDEPSEQKILLG-IICAVIQAVKISNWIINNSVYELDSPACDLIPNI 238
P NE WS E QK + I + +A + SNW++ NS EL+ ACDLIP+
Sbjct: 178 FPPCNSNELVWSVSGETEMQKFIFAQFIRDIAEAARNSNWLLVNSFSELEPSACDLIPDA 237
Query: 239 LPIGPLLASNHSGD-LDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELAL 297
PIGP A+NH G GN W EDS+CL+WLD+Q SV+Y AFGS V +QQQ ELA+
Sbjct: 238 SPIGPFCANNHLGQPFAGNLWREDSTCLNWLDQQPEDSVIYAAFGSTGVCNQQQLNELAI 297
Query: 298 GLESLQKPFLWVIRQDFMNGSRAKFPDGFIERVSNRGKIVEWAPQEKVLGHSSVACFISH 357
GLE + +PFLWV+R DF GS +FPDGF+ERV+ GKIVEWAPQE+VL H S ACF SH
Sbjct: 298 GLEMIGQPFLWVVRSDFTKGSLTEFPDGFMERVATYGKIVEWAPQEQVLAHPSTACFFSH 357
Query: 358 CGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGIITRQEIQRKVL 417
CGWNSTMEGL+MG+PFLCWP DQ+ N++YICE WK+GL DENGI+TR EI+ K+
Sbjct: 358 CGWNSTMEGLTMGIPFLCWPCLVDQFHNKSYICETWKVGLGVIPDENGIVTRNEIKAKIE 417
Query: 418 TLLKNDDIRSNSLKLKEVARKSLLGGGSSFRNFESFISDIK 458
LL + DI++NSLKLKE+++KS+ GGSSF+NF SF+ IK
Sbjct: 418 KLLSDKDIKANSLKLKEMSQKSISEGGSSFKNFISFVEQIK 458
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 468 | ||||||
| TAIR|locus:2078608 | 464 | AT3G02100 [Arabidopsis thalian | 0.955 | 0.963 | 0.377 | 2.2e-82 | |
| TAIR|locus:2009557 | 489 | UGT85A1 [Arabidopsis thaliana | 0.429 | 0.411 | 0.397 | 3.3e-65 | |
| TAIR|locus:2032105 | 489 | UGT85A4 "AT1G78270" [Arabidops | 0.963 | 0.922 | 0.322 | 5.2e-65 | |
| TAIR|locus:2196496 | 479 | UGT85A5 "UDP-glucosyl transfer | 0.942 | 0.920 | 0.325 | 2.1e-61 | |
| TAIR|locus:2196490 | 488 | UGT85A3 "AT1G22380" [Arabidops | 0.980 | 0.940 | 0.303 | 5.5e-61 | |
| TAIR|locus:2196501 | 481 | UGT85A2 "UDP-glucosyl transfer | 0.963 | 0.937 | 0.308 | 1.9e-60 | |
| TAIR|locus:2089880 | 496 | UGT84A2 "UDP-glucosyl transfer | 0.410 | 0.387 | 0.427 | 2e-53 | |
| TAIR|locus:2074738 | 447 | UGT76B1 "UDP-dependent glycosy | 0.920 | 0.964 | 0.292 | 2.4e-53 | |
| TAIR|locus:2031983 | 453 | UGT74E2 "AT1G05680" [Arabidops | 0.416 | 0.430 | 0.391 | 6.9e-53 | |
| TAIR|locus:2045238 | 456 | UGT74D1 "UDP-glucosyl transfer | 0.435 | 0.447 | 0.421 | 1.6e-51 |
| TAIR|locus:2078608 AT3G02100 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 826 (295.8 bits), Expect = 2.2e-82, P = 2.2e-82
Identities = 176/466 (37%), Positives = 266/466 (57%)
Query: 4 QPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDS--SSQ 61
+PHV+VIPYPAQGHV PL+ + +A++ I++T +NT+F H +II+SL + Q
Sbjct: 11 RPHVVVIPYPAQGHVLPLISFSRYLAKQGIQITFINTEFNHNRIISSLPNSPHEDYVGDQ 70
Query: 62 IKLVTIPDGLELQAADREDPLKLGESVARAMRGCLRDLIEKIN-QSNDCEPIRCVIADVT 120
I LV+IPDGLE +R P KL ESV R M + +LIE++ +++ I CV+AD +
Sbjct: 71 INLVSIPDGLEDSPEERNIPGKLSESVLRFMPKKVEELIERMMAETSGGTIISCVVADQS 130
Query: 121 VGSALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGIIDPNGFAILNDGLISLSDEI 180
+G A+EVA GI R A P S+ L KL++ G+ID +G +N I LS +
Sbjct: 131 LGWAIEVAAKFGIRRTAFCPAAAASMVLGFSIQKLIDDGLIDSDGTVRVNK-TIQLSPGM 189
Query: 181 PAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACDXXXXXXX 240
P + +++ W QK + ++ +++ ++W++ NSV+EL++ A
Sbjct: 190 PKMETDKFVWVCLKNKESQKNIFQLMLQNNNSIESTDWLLCNSVHELETAAFGLGPNIVP 249
Query: 241 XXXX--XASNHSGDLD-GNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELAL 297
S G G+F D CL WLD Q SV+YVAFGS V+ Q ELA+
Sbjct: 250 IGPIGWAHSLEEGSTSLGSFLPHDRDCLDWLDRQIPGSVIYVAFGSFGVMGNPQLEELAI 309
Query: 298 GLESLQKPFLWVIRQDFMNGSRAKFPDGFIERVSNRGKIVEWAPQEKVLGHSSVACFISH 357
GLE ++P LWV G + G S+R K+V WAPQ +VL ++ CF+SH
Sbjct: 310 GLELTKRPVLWV------TGDQQPIKLG-----SDRVKVVRWAPQREVLSSGAIGCFVSH 358
Query: 358 CGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGIITRQEIQRKVL 417
CGWNST+EG G+PFLC PYF+DQ+ N+ YIC+ WKIGL D G++ R E+++K+
Sbjct: 359 CGWNSTLEGAQNGIPFLCIPYFADQFINKAYICDVWKIGLGLERDARGVVPRLEVKKKID 418
Query: 418 TLLKND-DIRSNSLKLKEVARKSLLGGGSSFRNFESFISDIKMLIS 462
++++ + ++K+KE+ KS+ G S N F++ IK ++
Sbjct: 419 EIMRDGGEYEERAMKVKEIVMKSVAKDGISCENLNKFVNWIKSQVN 464
|
|
| TAIR|locus:2009557 UGT85A1 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 450 (163.5 bits), Expect = 3.3e-65, Sum P(2) = 3.3e-65
Identities = 83/209 (39%), Positives = 121/209 (57%)
Query: 251 GDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALGLESLQKPFLWVI 310
G + N W E+ CL WLD + SV+Y+ FGS+ VLS +Q E A GL K FLWVI
Sbjct: 275 GMMSSNLWKEEMECLDWLDTKTQNSVIYINFGSITVLSVKQLVEFAWGLAGSGKEFLWVI 334
Query: 311 RQDFMNGSRAKFPDGFIERVSNRGKIVEWAPQEKVLGHSSVACFISHCGWNSTMEGLSMG 370
R D + G A P F+ +R + W PQEKVL H ++ F++HCGWNS +E LS G
Sbjct: 335 RPDLVAGEEAMVPPDFLMETKDRSMLASWCPQEKVLSHPAIGGFLTHCGWNSILESLSCG 394
Query: 371 VPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGIITRQEIQRKVLTLL---KNDDIRS 427
VP +CWP+F+DQ N + C+ W +G++ D + R+E++ V L+ K +R
Sbjct: 395 VPMVCWPFFADQQMNCKFCCDEWDVGIEIGGD----VKREEVEAVVRELMDGEKGKKMRE 450
Query: 428 NSLKLKEVARKSLLGG-GSSFRNFESFIS 455
+++ + +A K+ GSS NFE+ +S
Sbjct: 451 KAVEWQRLAEKATEHKLGSSVMNFETVVS 479
|
|
| TAIR|locus:2032105 UGT85A4 "AT1G78270" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 662 (238.1 bits), Expect = 5.2e-65, P = 5.2e-65
Identities = 154/477 (32%), Positives = 247/477 (51%)
Query: 2 SRQPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQ 61
S++PH + IPYPAQGH+ P++KLA + R VT VNT + H++I+ S A +
Sbjct: 9 SQKPHAMCIPYPAQGHINPMLKLAKLLHARGFHVTFVNTDYNHRRILQSRGPHALNGLPS 68
Query: 62 IKLVTIPDGLELQAAD-REDPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVT 120
+ TIPDGL D ++D LKL +S +DLI ++N +D P+ C+I+D +
Sbjct: 69 FRFETIPDGLPWTDVDAKQDMLKLIDSTINNCLAPFKDLILRLNSGSDIPPVSCIISDAS 128
Query: 121 VGSALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGIIDPNGFAILNDGLISLSDEI 180
+ ++ AE + I + +L L L + KL+E II + L L + D I
Sbjct: 129 MSFTIDAAEELKIPVVLLWTNSATALILYLHYQKLIEKEIIPLKDSSDLKKHLETEIDWI 188
Query: 181 PAWKRNEYTWSFPD---EPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACDXXXX 237
P+ K+ + FPD + Q ++ I V +K ++ I N+ +L+
Sbjct: 189 PSMKKIKLK-DFPDFVTTTNPQDPMISFILHVTGRIKRASAIFINTFEKLEHNVLLSLRS 247
Query: 238 XXXXXXXXA-----SNHSGDLDG-------NFWSEDSSCLSWLDEQAIRSVVYVAFGSVA 285
N D + N W E++ L WLD +A ++V+YV FGS+
Sbjct: 248 LLPQIYSVGPFQILENREIDKNSEIRKLGLNLWEEETESLDWLDTKAEKAVIYVNFGSLT 307
Query: 286 VLSQQQFAELALGLESLQKPFLWVIRQDFMNGSRAKFPDGFIERVSNRGKIVE-WAPQEK 344
VL+ +Q E A GL K FLWV+R ++G + P F+ NRG +++ W QEK
Sbjct: 308 VLTSEQILEFAWGLARSGKEFLWVVRSGMVDGDDSILPAEFLSETKNRGMLIKGWCSQEK 367
Query: 345 VLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADEN 404
VL H ++ F++HCGWNST+E L GVP +CWP+F+DQ NR + CE W IG++ +E
Sbjct: 368 VLSHPAIGGFLTHCGWNSTLESLYAGVPMICWPFFADQLTNRKFCCEDWGIGMEI-GEE- 425
Query: 405 GIITRQEIQRKVLTLL---KNDDIRSNSLKLKEVARKSLLGG-GSSFRNFESFISDI 457
+ R+ ++ V L+ K +R ++ + +A ++ GSS+ NFE+ ++ +
Sbjct: 426 --VKRERVETVVKELMDGEKGKRLREKVVEWRRLAEEASAPPLGSSYVNFETVVNKV 480
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| TAIR|locus:2196496 UGT85A5 "UDP-glucosyl transferase 85A5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 628 (226.1 bits), Expect = 2.1e-61, P = 2.1e-61
Identities = 156/480 (32%), Positives = 242/480 (50%)
Query: 3 RQPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQI 62
++PHV+ IP+PAQGH+ P++K+A + R VT VNT + H ++I S + D
Sbjct: 10 QKPHVVCIPFPAQGHINPMLKVAKLLYARGFHVTFVNTNYNHNRLIRSRGPNSLDGLPSF 69
Query: 63 KLVTIPDGLELQAAD-REDPLKLGESVARAMRGCL---RDLIEKINQSNDCEPIRCVIAD 118
+ +IPDGL + D +D L ES M+ CL ++L+ +IN + D P+ C+++D
Sbjct: 70 RFESIPDGLPEENKDVMQDVPTLCEST---MKNCLAPFKELLRRINTTKDVPPVSCIVSD 126
Query: 119 VTVGSALEVAESMGIARAAV-VPFGPGSLALSLQFPKLLEAGIIDPNGFAILNDGLISLS 177
+ L+ AE +G+ P G LA L F + +E G+ + L+ +
Sbjct: 127 GVMSFTLDAAEELGVPDVLFWTPSACGFLAY-LHFYRFIEKGLSPIKDESSLDTKI---- 181
Query: 178 DEIPAWKRN--EYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACDXX 235
+ IP+ K + SF + + I+L K ++ II N+ L+
Sbjct: 182 NWIPSMKNLGLKDIPSFIRATNTEDIMLNFFVHEADRAKRASAIILNTFDSLEHDVVRSI 241
Query: 236 XXXXXXXXXXASNH---SGDLD-----G----NFWSEDSSCLSWLDEQAIRSVVYVAFGS 283
H + D+D G N W E+ CL WLD ++ SVVYV FGS
Sbjct: 242 QSIIPQVYTIGPLHLFVNRDIDEESDIGQIGTNMWREEMECLDWLDTKSPNSVVYVNFGS 301
Query: 284 VAVLSQQQFAELALGLESLQKPFLWVIRQDFMNGSRAKFPDGFIERVSNRGKIVEWAPQE 343
+ V+S +Q E A GL + +K FLWVIR D + G P F+ +NR + W PQE
Sbjct: 302 ITVMSAKQLVEFAWGLAATKKDFLWVIRPDLVAGDVPMLPPDFLIETANRRMLASWCPQE 361
Query: 344 KVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADE 403
KVL H +V F++H GWNST+E LS GVP +CWP+F++Q N Y C+ W++G++ D
Sbjct: 362 KVLSHPAVGGFLTHSGWNSTLESLSGGVPMVCWPFFAEQQTNCKYCCDEWEVGMEIGGD- 420
Query: 404 NGIITRQEIQRKVLTLLKNDD---IRSNS---LKLKEVARKSLLGGGSSFRNFESFISDI 457
+ R+E++ V L+ D +R + +L E A K + G SS NF+ + +
Sbjct: 421 ---VRREEVEELVRELMDGDKGKKMRQKAEEWQRLAEEATKPIYG--SSELNFQMVVDKV 475
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| TAIR|locus:2196490 UGT85A3 "AT1G22380" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 624 (224.7 bits), Expect = 5.5e-61, P = 5.5e-61
Identities = 147/485 (30%), Positives = 241/485 (49%)
Query: 3 RQPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQI 62
++PHV+ +PYPAQGH+ P+MK+A + + VT VNT + H +++ S A D
Sbjct: 10 QKPHVVCVPYPAQGHINPMMKVAKLLHVKGFHVTFVNTVYNHNRLLRSRGANALDGLPSF 69
Query: 63 KLVTIPDGLELQAADR-EDPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTV 121
+ +IPDGL D +D L ES + + L+++I D P+ C+++D ++
Sbjct: 70 QFESIPDGLPETGVDATQDIPALSESTTKNCLVPFKKLLQRIVTREDVPPVSCIVSDGSM 129
Query: 122 GSALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGIIDPNGFAILN-DGLISLSDEI 180
L+VAE +G+ L F +E G+ + L + L ++ D I
Sbjct: 130 SFTLDVAEELGVPEIHFWTTSACGFMAYLHFYLFIEKGLCPVKDASCLTKEYLDTVIDWI 189
Query: 181 PAWKRNEYTW--SFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACDXXXXX 238
P+ + SF + I+L + K ++ II N+ +L+
Sbjct: 190 PSMNNVKLKDIPSFIRTTNPNDIMLNFVVREACRTKRASAIILNTFDDLEHDIIQSMQSI 249
Query: 239 XXXXXXXASNHS------------GDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAV 286
H G + N W E++ CL WL+ ++ SVVYV FGS+ +
Sbjct: 250 LPPVYPIGPLHLLVNREIEEDSEIGRMGSNLWKEETECLGWLNTKSRNSVVYVNFGSITI 309
Query: 287 LSQQQFAELALGLESLQKPFLWVIRQDFMNGSRAKFPDGFIERVSNRGKIVEWAPQEKVL 346
++ Q E A GL + K FLWV+R D + G A P F+ ++R + W PQEKVL
Sbjct: 310 MTTAQLLEFAWGLAATGKEFLWVMRPDSVAGEEAVIPKEFLAETADRRMLTSWCPQEKVL 369
Query: 347 GHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGI 406
H +V F++HCGWNST+E LS GVP +CWP+F++Q N + C+ W++G++ D
Sbjct: 370 SHPAVGGFLTHCGWNSTLESLSCGVPMVCWPFFAEQQTNCKFSCDEWEVGIEIGGD---- 425
Query: 407 ITRQEIQRKVLTLL---KNDDIRSNSLKLKEVARKSL-LGGGSSFRNFESFISDIKMLIS 462
+ R E++ V L+ K +R +++ + +A K+ L GSS NFE+ ++ K+L+
Sbjct: 426 VKRGEVEAVVRELMDGEKGKKMREKAVEWRRLAEKATKLPCGSSVINFETIVN--KVLLG 483
Query: 463 GCDST 467
+T
Sbjct: 484 KIPNT 488
|
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| TAIR|locus:2196501 UGT85A2 "UDP-glucosyl transferase 85A2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 619 (223.0 bits), Expect = 1.9e-60, P = 1.9e-60
Identities = 148/479 (30%), Positives = 242/479 (50%)
Query: 1 MSRQPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSS 60
++++ HV+ +PYPAQGH+ P+MK+A + + +T VNT + H +++ S A D
Sbjct: 5 VAQKQHVVCVPYPAQGHINPMMKVAKLLYAKGFHITFVNTVYNHNRLLRSRGPNAVDGLP 64
Query: 61 QIKLVTIPDGLELQAAD-REDPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADV 119
+ +IPDGL D +D L ES + ++L+ +IN +D P+ C+++D
Sbjct: 65 SFRFESIPDGLPETDVDVTQDIPTLCESTMKHCLAPFKELLRQINARDDVPPVSCIVSDG 124
Query: 120 TVGSALEVAESMGIARAAV-VPFGPGSLALSLQFPKLLEAGI--IDPNGFAILNDGLISL 176
+ L+ AE +G+ G LA L + + +E G+ I + + + L +
Sbjct: 125 CMSFTLDAAEELGVPEVLFWTTSACGFLAY-LYYYRFIEKGLSPIKDESY-LTKEHLDTK 182
Query: 177 SDEIPAWK--RNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACDX 234
D IP+ K R + SF + I+L I K ++ II N+ +L+
Sbjct: 183 IDWIPSMKNLRLKDIPSFIRTTNPDDIMLNFIIREADRAKRASAIILNTFDDLEHDVIQS 242
Query: 235 XXXXXXXXXXXASNH------SGDLD------GNFWSEDSSCLSWLDEQAIRSVVYVAFG 282
H SG+ N W E++ CL WL+ +A SVVYV FG
Sbjct: 243 MKSIVPPVYSIGPLHLLEKQESGEYSEIGRTGSNLWREETECLDWLNTKARNSVVYVNFG 302
Query: 283 SVAVLSQQQFAELALGLESLQKPFLWVIRQDFMNGSRAKFPDGFIERVSNRGKIVEWAPQ 342
S+ VLS +Q E A GL + K FLWVIR D + G A P F+ ++R + W PQ
Sbjct: 303 SITVLSAKQLVEFAWGLAATGKEFLWVIRPDLVAGDEAMVPPEFLTATADRRMLASWCPQ 362
Query: 343 EKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFAD 402
EKVL H ++ F++HCGWNST+E L GVP +CWP+F++Q N + + W++G++ D
Sbjct: 363 EKVLSHPAIGGFLTHCGWNSTLESLCGGVPMVCWPFFAEQQTNCKFSRDEWEVGIEIGGD 422
Query: 403 ENGIITRQEIQRKVLTLL---KNDDIRSNSLKLKEVARKSLLGG-GSSFRNFESFISDI 457
+ R+E++ V L+ K ++R + + + +A ++ GSS NFE ++ +
Sbjct: 423 ----VKREEVEAVVRELMDEEKGKNMREKAEEWRRLANEATEHKHGSSKLNFEMLVNKV 477
|
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| TAIR|locus:2089880 UGT84A2 "UDP-glucosyl transferase 84A2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 444 (161.4 bits), Expect = 2.0e-53, Sum P(2) = 2.0e-53
Identities = 85/199 (42%), Positives = 125/199 (62%)
Query: 264 CLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALGLESLQKPFLWVIRQDFMNGSRAKFP 323
C+ WLD Q + SVVY++FG+VA L Q+Q E+A G+ + FLWVIRQ + ++ K
Sbjct: 276 CMEWLDSQPVSSVVYISFGTVAYLKQEQIDEIAYGVLNADVTFLWVIRQQELGFNKEKHV 335
Query: 324 DGFIERVSNRGKIVEWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQY 383
E V +GKIVEW QEKVL H SVACF++HCGWNSTME +S GVP +C+P + DQ
Sbjct: 336 --LPEEVKGKGKIVEWCSQEKVLSHPSVACFVTHCGWNSTMEAVSSGVPTVCFPQWGDQV 393
Query: 384 QNRNYICEAWKIGLQFFADE--NGIITRQEIQRKVLTLLKND---DIRSNSLKLKEVARK 438
+ Y+ + WK G++ E ++ R+E+ ++ + K + +++ N+LK KE A
Sbjct: 394 TDAVYMIDVWKTGVRLSRGEAEERLVPREEVAERLREVTKGEKAIELKKNALKWKEEAEA 453
Query: 439 SLLGGGSSFRNFESFISDI 457
++ GGSS RN E F+ +
Sbjct: 454 AVARGGSSDRNLEKFVEKL 472
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| TAIR|locus:2074738 UGT76B1 "UDP-dependent glycosyltransferase 76B1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 552 (199.4 bits), Expect = 2.4e-53, P = 2.4e-53
Identities = 135/461 (29%), Positives = 222/461 (48%)
Query: 4 QPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIK 63
+P + + P+P QGH+ P+ +LA R +TV++T+F +
Sbjct: 7 KPVIFLFPFPLQGHLNPMFQLANIFFNRGFSITVIHTEF---------NSPNSSNFPHFT 57
Query: 64 LVTIPDGLELQAADREDPLKLGESVARAMRGCLRDLIEKINQSNDCEPIR-CVIADVTVG 122
V+IPD L + D +++ + D ++K+ EP CVI D
Sbjct: 58 FVSIPDSLS-EPESYPDVIEILHDLNSKCVAPFGDCLKKLISE---EPTAACVIVDALWY 113
Query: 123 SALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGIIDPNGFAILNDGLISLSDEIPA 182
++ E R + + +F L E G + ++ S E+P
Sbjct: 114 FTHDLTEKFNFPRIVLRTVNLSAFVAFSKFHVLREKGYL-----SLQETKADSPVPELPY 168
Query: 183 WKRNEYTWSFPDEP-SEQKILLGIICAVIQAVKISNWIINNSVYELDSPACDXXXXXXXX 241
+ + W ++P S K+ +G V++++K S+ II N++ +L++ D
Sbjct: 169 LRMKDLPWFQTEDPRSGDKLQIG----VMKSLKSSSGIIFNAIEDLETDQLDEARIEFPV 224
Query: 242 XXXXAS---NHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALG 298
+ + + D +CLSWLD+QA SV+Y + GS+A + + +F E+A G
Sbjct: 225 PLFCIGPFHRYVSASSSSLLAHDMTCLSWLDKQATNSVIYASLGSIASIDESEFLEIAWG 284
Query: 299 LESLQKPFLWVIRQDFMNGSR--AKFPDGFIERVSNRGKIVEWAPQEKVLGHSSVACFIS 356
L + +PFLWV+R ++G P GFIE + RGKIV+WAPQ +VL H + F++
Sbjct: 285 LRNSNQPFLWVVRPGLIHGKEWIEILPKGFIENLEGRGKIVKWAPQPEVLAHRATGGFLT 344
Query: 357 HCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGIITRQEIQRKV 416
HCGWNST+EG+ +P +C P F DQ N YI + WKIGL ++ + R +
Sbjct: 345 HCGWNSTLEGICEAIPMICRPSFGDQRVNARYINDVWKIGLHLENKVERLVIENAV-RTL 403
Query: 417 LTLLKNDDIRSNSLKLKEVARKSLLGGGSSFRNFESFISDI 457
+T + ++IR + +KE + L GGSSFRN E+ I+ I
Sbjct: 404 MTSSEGEEIRKRIMPMKETVEQCLKLGGSSFRNLENLIAYI 444
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| TAIR|locus:2031983 UGT74E2 "AT1G05680" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 432 (157.1 bits), Expect = 6.9e-53, Sum P(2) = 6.9e-53
Identities = 79/202 (39%), Positives = 131/202 (64%)
Query: 257 FWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALGLESLQKPFLWVIRQDFMN 316
F ++ + C+ WL+ + SVVY++FGS+ +L + Q ELA GL+ + FLWV+R+ +
Sbjct: 253 FNAKVAECMEWLNSKEPNSVVYLSFGSLVILKEDQMLELAAGLKQSGRFFLWVVRETETH 312
Query: 317 GSRAKFPDGFIERVSNRGKIVEWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCW 376
K P ++E + +G IV W+PQ VL H S+ CF++HCGWNST+EGLS+GVP +
Sbjct: 313 ----KLPRNYVEEIGEKGLIVSWSPQLDVLAHKSIGCFLTHCGWNSTLEGLSLGVPMIGM 368
Query: 377 PYFSDQYQNRNYICEAWKIGLQFFADENGIITRQEIQRKVLTLL---KNDDIRSNSLKLK 433
P+++DQ N ++ + WK+G++ A+ +G + R+EI R V ++ K +IR N+ K K
Sbjct: 369 PHWTDQPTNAKFMQDVWKVGVRVKAEGDGFVRREEIMRSVEEVMEGEKGKEIRKNAEKWK 428
Query: 434 EVARKSLLGGGSSFRNFESFIS 455
+A++++ GGSS ++ F+S
Sbjct: 429 VLAQEAVSEGGSSDKSINEFVS 450
|
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| TAIR|locus:2045238 UGT74D1 "UDP-glucosyl transferase 74D1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 449 (163.1 bits), Expect = 1.6e-51, Sum P(2) = 1.6e-51
Identities = 91/216 (42%), Positives = 137/216 (63%)
Query: 250 SGDLD-G-N-FWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALGLESLQKPF 306
+GD D G N F ++ + CL WLD + SV+YV+FGS+AVL Q E+A GL+ F
Sbjct: 243 AGDKDYGINLFNAQVNECLDWLDSKPPGSVIYVSFGSLAVLKDDQMIEVAAGLKQTGHNF 302
Query: 307 LWVIRQDFMNGSRAKFPDGFIERVSNRGKIVEWAPQEKVLGHSSVACFISHCGWNSTMEG 366
LWV+R+ K P +IE + ++G IV W+PQ +VL H S+ CF++HCGWNST+E
Sbjct: 303 LWVVRET----ETKKLPSNYIEDICDKGLIVNWSPQLQVLAHKSIGCFMTHCGWNSTLEA 358
Query: 367 LSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGIITRQEIQRKVLTLL-----K 421
LS+GV + P +SDQ N +I + WK+G++ AD+NG + ++EI R V ++ K
Sbjct: 359 LSLGVALIGMPAYSDQPTNAKFIEDVWKVGVRVKADQNGFVPKEEIVRCVGEVMEDMSEK 418
Query: 422 NDDIRSNSLKLKEVARKSLLGGGSSFRNFESFISDI 457
+IR N+ +L E AR++L GG+S +N + F++ I
Sbjct: 419 GKEIRKNARRLMEFAREALSDGGNSDKNIDEFVAKI 454
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9SGA8 | U83A1_ARATH | 2, ., 4, ., 1, ., - | 0.3982 | 0.9465 | 0.9547 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.4.1 | 0.766 |
| 4th Layer | 2.4.1.195 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | GSVIVG00016242001 | SubName- Full=Chromosome chr17 scaffold_12, whole genome shotgun sequence; (456 aa) | |||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 468 | |||
| PLN02555 | 480 | PLN02555, PLN02555, limonoid glucosyltransferase | 3e-77 | |
| PLN02562 | 448 | PLN02562, PLN02562, UDP-glycosyltransferase | 2e-73 | |
| PLN02173 | 449 | PLN02173, PLN02173, UDP-glucosyl transferase famil | 4e-64 | |
| PLN02410 | 451 | PLN02410, PLN02410, UDP-glucoronosyl/UDP-glucosyl | 2e-60 | |
| PLN02448 | 459 | PLN02448, PLN02448, UDP-glycosyltransferase family | 8e-60 | |
| PLN02210 | 456 | PLN02210, PLN02210, UDP-glucosyl transferase | 1e-57 | |
| PLN03007 | 482 | PLN03007, PLN03007, UDP-glucosyltransferase family | 4e-50 | |
| PLN02152 | 455 | PLN02152, PLN02152, indole-3-acetate beta-glucosyl | 2e-49 | |
| PLN03004 | 451 | PLN03004, PLN03004, UDP-glycosyltransferase | 9e-47 | |
| PLN02167 | 475 | PLN02167, PLN02167, UDP-glycosyltransferase family | 7e-46 | |
| PLN02863 | 477 | PLN02863, PLN02863, UDP-glucoronosyl/UDP-glucosyl | 9e-46 | |
| PLN02554 | 481 | PLN02554, PLN02554, UDP-glycosyltransferase family | 6e-45 | |
| PLN02992 | 481 | PLN02992, PLN02992, coniferyl-alcohol glucosyltran | 4e-44 | |
| PLN03015 | 470 | PLN03015, PLN03015, UDP-glucosyl transferase | 1e-41 | |
| PLN02207 | 468 | PLN02207, PLN02207, UDP-glycosyltransferase | 1e-41 | |
| PLN02534 | 491 | PLN02534, PLN02534, UDP-glycosyltransferase | 9e-39 | |
| PLN02670 | 472 | PLN02670, PLN02670, transferase, transferring glyc | 1e-35 | |
| PLN00164 | 480 | PLN00164, PLN00164, glucosyltransferase; Provision | 7e-35 | |
| PLN02764 | 453 | PLN02764, PLN02764, glycosyltransferase family pro | 2e-29 | |
| cd03784 | 401 | cd03784, GT1_Gtf_like, This family includes the Gt | 2e-23 | |
| PLN00414 | 446 | PLN00414, PLN00414, glycosyltransferase family pro | 7e-23 | |
| PLN02208 | 442 | PLN02208, PLN02208, glycosyltransferase family pro | 4e-22 | |
| pfam00201 | 500 | pfam00201, UDPGT, UDP-glucoronosyl and UDP-glucosy | 5e-22 | |
| COG1819 | 406 | COG1819, COG1819, Glycosyl transferases, related t | 5e-15 | |
| TIGR01426 | 392 | TIGR01426, MGT, glycosyltransferase, MGT family | 2e-08 | |
| PLN02534 | 491 | PLN02534, PLN02534, UDP-glycosyltransferase | 3e-08 | |
| PHA03392 | 507 | PHA03392, egt, ecdysteroid UDP-glucosyltransferase | 2e-06 |
| >gnl|CDD|178170 PLN02555, PLN02555, limonoid glucosyltransferase | Back alignment and domain information |
|---|
Score = 248 bits (635), Expect = 3e-77
Identities = 147/485 (30%), Positives = 235/485 (48%), Gaps = 47/485 (9%)
Query: 2 SRQPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQ 61
S HV+++ +P QGHV PL++L +A + + VT V T+ KK+ + K +D +
Sbjct: 5 SSLVHVMLVSFPGQGHVNPLLRLGKLLASKGLLVTFVTTESWGKKMRQA--NKIQDGVLK 62
Query: 62 ------IKLVTIPDGLELQAADREDPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCV 115
I+ DG R+D + + + +L+++ + P+ C+
Sbjct: 63 PVGDGFIRFEFFEDGWAEDDPRRQDLDLYLPQLELVGKREIPNLVKRYAEQG--RPVSCL 120
Query: 116 IADVTVGSALEVAESMGIARAAVVPFGPGSLAL-------SLQFPKLLEAGI-IDPNGFA 167
I + + +VAE +GI A + + + FP E I +
Sbjct: 121 INNPFIPWVCDVAEELGIPSAVLWVQSCACFSAYYHYYHGLVPFPTETEPEIDVQLPCMP 180
Query: 168 ILNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYEL 227
+L DEIP SF S L I + + I+ ++ EL
Sbjct: 181 LLK------YDEIP---------SFLHPSSPYPFLRRAILGQYKNLDKPFCILIDTFQEL 225
Query: 228 DSPACDLIPNILPI---GPL--LASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFG 282
+ D + + PI GPL +A + D+ G+ C+ WLD + SVVY++FG
Sbjct: 226 EKEIIDYMSKLCPIKPVGPLFKMAKTPNSDVKGDISKPADDCIEWLDSKPPSSVVYISFG 285
Query: 283 SVAVLSQQQFAELALGLESLQKPFLWVIRQDFMNGSRAK---FPDGFIERVSNRGKIVEW 339
+V L Q+Q E+A G+ + FLWV+R S + P+ F+E+ ++GKIV+W
Sbjct: 286 TVVYLKQEQIDEIAYGVLNSGVSFLWVMRPP-HKDSGVEPHVLPEEFLEKAGDKGKIVQW 344
Query: 340 APQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQF 399
PQEKVL H SVACF++HCGWNSTME LS GVP +C+P + DQ + Y+ + +K G++
Sbjct: 345 CPQEKVLAHPSVACFVTHCGWNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRL 404
Query: 400 F--ADENGIITRQEIQRKVLTLL---KNDDIRSNSLKLKEVARKSLLGGGSSFRNFESFI 454
EN +ITR+E+ +L K +++ N+LK KE A ++ GGSS RNF+ F+
Sbjct: 405 CRGEAENKLITREEVAECLLEATVGEKAAELKQNALKWKEEAEAAVAEGGSSDRNFQEFV 464
Query: 455 SDIKM 459
+
Sbjct: 465 DKLVR 469
|
Length = 480 |
| >gnl|CDD|215305 PLN02562, PLN02562, UDP-glycosyltransferase | Back alignment and domain information |
|---|
Score = 238 bits (608), Expect = 2e-73
Identities = 143/470 (30%), Positives = 232/470 (49%), Gaps = 36/470 (7%)
Query: 1 MSRQPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSS 60
++++P ++++PYPAQGHV P++KLA+ R + V+ +FIH++I A+L K
Sbjct: 3 VTQRPKIILVPYPAQGHVTPMLKLASAFLSRGFEPVVITPEFIHRRISATLDPKL----- 57
Query: 61 QIKLVTIPDGLELQAADREDPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVT 120
I ++I DG + D + S+ M L L+ K+++ + + C++ D+
Sbjct: 58 GITFMSISDGQD--DDPPRDFFSIENSMENTMPPQLERLLHKLDEDGE---VACMVVDLL 112
Query: 121 VGSALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGIIDPNGFAILNDGLISLSDEI 180
A+ VA+ G+ A P + L P+L+ G+I G + + L ++
Sbjct: 113 ASWAIGVADRCGVPVAGFWPVMLAAYRLIQAIPELVRTGLISETGCPRQLEKICVLPEQ- 171
Query: 181 PAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACD---LI-- 235
P + W P +K ++ K WI+ NS + +
Sbjct: 172 PLLSTEDLPW-LIGTPKARKARFKFWTRTLERTKSLRWILMNSFKDEEYDDVKNHQASYN 230
Query: 236 ----PNILPIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGS-VAVLSQQ 290
P IL IGPL + +FW ED SCL WL EQ SV+Y++FGS V+ + +
Sbjct: 231 NGQNPQILQIGPLHNQEATTITKPSFWEEDMSCLGWLQEQKPNSVIYISFGSWVSPIGES 290
Query: 291 QFAELALGLESLQKPFLWVIRQDFMNGSRAKFPDGFIERVSNRGKIVEWAPQEKVLGHSS 350
LAL LE+ +PF+WV+ + G P G++ERVS +GK+V WAPQ +VL H +
Sbjct: 291 NVRTLALALEASGRPFIWVLNPVWREG----LPPGYVERVSKQGKVVSWAPQLEVLKHQA 346
Query: 351 VACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGIITR- 409
V C+++HCGWNSTME + LC+P DQ+ N YI + WKIG++ +G +
Sbjct: 347 VGCYLTHCGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRI----SGFGQKE 402
Query: 410 -QEIQRKVLTLLKNDDIRSNSLKLKEVARKSLLGGGSSFRNFESFISDIK 458
+E RKV +++ + +KL+E A S NF + ++K
Sbjct: 403 VEEGLRKV---MEDSGMGERLMKLRERAMGE-EARLRSMMNFTTLKDELK 448
|
Length = 448 |
| >gnl|CDD|177830 PLN02173, PLN02173, UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Score = 213 bits (544), Expect = 4e-64
Identities = 146/476 (30%), Positives = 246/476 (51%), Gaps = 58/476 (12%)
Query: 6 HVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLV 65
HVL +P+P+QGH+ P+ + ++ + K T T FI I D SS I +
Sbjct: 7 HVLAVPFPSQGHITPIRQFCKRLHSKGFKTTHTLTTFIFNTI-------HLDPSSPISIA 59
Query: 66 TIPDGLELQAADREDPL-KLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVGSA 124
TI DG + + + ++ + D+I K +QS D PI C++ D + A
Sbjct: 60 TISDGYDQGGFSSAGSVPEYLQNFKTFGSKTVADIIRK-HQSTD-NPITCIVYDSFMPWA 117
Query: 125 LEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGIIDPNGFAILNDGLISLS-DEIPAW 183
L++A G+A A PF S A++ N + +N+G ++L ++P
Sbjct: 118 LDLAREFGLAAA---PFFTQSCAVNYI------------NYLSYINNGSLTLPIKDLPLL 162
Query: 184 KRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELD-------SPACDLIP 236
+ + S ++ K +++++ NS ++LD S C
Sbjct: 163 ELQDLPTFVTPTGSHLAYFEMVLQQFTNFDK-ADFVLVNSFHDLDLHENELLSKVCP--- 218
Query: 237 NILPIGPLLASNH-------SGDLDGNFWS--EDSSCLSWLDEQAIRSVVYVAFGSVAVL 287
+L IGP + S + D D N + E + C WLD++ SVVY+AFGS+A L
Sbjct: 219 -VLTIGPTVPSMYLDQQIKSDNDYDLNLFDLKEAALCTDWLDKRPQGSVVYIAFGSMAKL 277
Query: 288 SQQQFAELALGLESLQKPFLWVIRQDFMNGSRAKFPDGFIERVS-NRGKIVEWAPQEKVL 346
S +Q E+A + + +LWV+R +K P GF+E V ++ +++W+PQ +VL
Sbjct: 278 SSEQMEEIASAISNFS--YLWVVR----ASEESKLPPGFLETVDKDKSLVLKWSPQLQVL 331
Query: 347 GHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFAD-ENG 405
+ ++ CF++HCGWNSTMEGLS+GVP + P ++DQ N YI + WK+G++ A+ E+G
Sbjct: 332 SNKAIGCFMTHCGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKAEKESG 391
Query: 406 IITRQEIQ---RKVLTLLKNDDIRSNSLKLKEVARKSLLGGGSSFRNFESFISDIK 458
I R+EI+ ++V+ K+ +++ N+ K +++A KSL GGS+ N +F+S I+
Sbjct: 392 IAKREEIEFSIKEVMEGEKSKEMKENAGKWRDLAVKSLSEGGSTDININTFVSKIQ 447
|
Length = 449 |
| >gnl|CDD|178032 PLN02410, PLN02410, UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Score = 204 bits (519), Expect = 2e-60
Identities = 140/473 (29%), Positives = 231/473 (48%), Gaps = 50/473 (10%)
Query: 7 VLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVT 66
V+++P PAQGH++P+M+LA + + +T+ T+F + D + + VT
Sbjct: 10 VVLVPVPAQGHISPMMQLAKTLHLKGFSITIAQTKFNYFS--------PSDDFTDFQFVT 61
Query: 67 IPDGLELQAADREDPL----KLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVG 122
IP+ L P+ KL + + + CL L+ + Q N+ I CV+ D +
Sbjct: 62 IPESLPESDFKNLGPIEFLHKLNKECQVSFKDCLGQLV--LQQGNE---IACVVYDEFMY 116
Query: 123 SALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGIIDPNGFAILNDGLISLSDEIPA 182
A A+ + + F KL ++ P L + ++ +P
Sbjct: 117 FAEAAAKEFKLPNVIFSTTSATAFVCRSVFDKLYANNVLAP-----LKEPKGQQNELVPE 171
Query: 183 WKRNEYTWSFPDEPSEQKILLGIICAVIQAV---KISNWIINNSVYELDSPACDLIPNIL 239
+ + D P L I + + + ++ +I N+ L+S + + L
Sbjct: 172 F----HPLRCKDFPVSHWASLESIMELYRNTVDKRTASSVIINTASCLESSSLSRLQQQL 227
Query: 240 -----PIGP--LLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQF 292
PIGP L+AS + L+ E+ SC+ WL++Q SV++V+ GS+A++ +
Sbjct: 228 QIPVYPIGPLHLVASAPTSLLE-----ENKSCIEWLNKQKKNSVIFVSLGSLALMEINEV 282
Query: 293 AELALGLESLQKPFLWVIRQDFMNGSR--AKFPDGFIERVSNRGKIVEWAPQEKVLGHSS 350
E A GL+S + FLWVIR + GS P F + +S RG IV+WAPQ++VL H +
Sbjct: 283 METASGLDSSNQQFLWVIRPGSVRGSEWIESLPKEFSKIISGRGYIVKWAPQKEVLSHPA 342
Query: 351 VACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGIITRQ 410
V F SHCGWNST+E + GVP +C P+ SDQ N Y+ WKIG+Q G + R
Sbjct: 343 VGGFWSHCGWNSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQV----EGDLDRG 398
Query: 411 EIQRKVLTLL---KNDDIRSNSLKLKEVARKSLLGGGSSFRNFESFISDIKML 460
++R V L+ + +++R ++ LKE R S++ GGSS + E F+ ++ L
Sbjct: 399 AVERAVKRLMVEEEGEEMRKRAISLKEQLRASVISGGSSHNSLEEFVHFMRTL 451
|
Length = 451 |
| >gnl|CDD|215247 PLN02448, PLN02448, UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Score = 202 bits (516), Expect = 8e-60
Identities = 138/477 (28%), Positives = 211/477 (44%), Gaps = 58/477 (12%)
Query: 6 HVLVIPYPAQGHVAPLMKLATKIAER--AIKVTVVNTQFIHKKIIASLQEKAEDSSSQIK 63
HV+ +PYP +GH+ P+M L +A R I +T V T+ I ++ I+
Sbjct: 12 HVVAMPYPGRGHINPMMNLCKLLASRKPDILITFVVTEEWLGLI------GSDPKPDNIR 65
Query: 64 LVTIPDGL--ELQAADREDPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTV 121
TIP+ + EL A D E+V M L++++ P+ ++AD +
Sbjct: 66 FATIPNVIPSELVRA--ADFPGFLEAVMTKMEAPFEQLLDRLEP-----PVTAIVADTYL 118
Query: 122 GSALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGIIDPNGFAI-LNDGLISLSDEI 180
A+ V I A++ ++ F L + G F + L++ D I
Sbjct: 119 FWAVGVGNRRNIPVASLWTMSATFFSVFYHFDLLPQNG-----HFPVELSESGEERVDYI 173
Query: 181 PAWKRNEYTWSFPDEPS----EQKILLGIICAVIQAVKISNWIINNSVYELDSPACDLIP 236
P D P + +L I V + +++ S YEL++ A D +
Sbjct: 174 PGLSSTR----LSDLPPIFHGNSRRVLKRILEAFSWVPKAQYLLFTSFYELEAQAIDALK 229
Query: 237 NILP-----IGPLLA----SNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVL 287
+ P IGP + ++S + + WLD Q SV+YV+ GS +
Sbjct: 230 SKFPFPVYPIGPSIPYMELKDNSSSSNNE--DNEPDYFQWLDSQPEGSVLYVSLGSFLSV 287
Query: 288 SQQQFAELALGLESLQKPFLWVIRQDFMNGSRAKFPDGFIERVSNRGKIVEWAPQEKVLG 347
S Q E+A GL FLWV R + SR K E + G +V W Q KVL
Sbjct: 288 SSAQMDEIAAGLRDSGVRFLWVARGE---ASRLK------EICGDMGLVVPWCDQLKVLC 338
Query: 348 HSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQF--FADENG 405
HSSV F +HCGWNST+E + GVP L +P F DQ N I E WKIG + E
Sbjct: 339 HSSVGGFWTHCGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKREVGEET 398
Query: 406 IITRQEIQRKVLTLLKND-----DIRSNSLKLKEVARKSLLGGGSSFRNFESFISDI 457
++ R+EI V + + ++R + +L+E+ R ++ GGSS N ++FI DI
Sbjct: 399 LVGREEIAELVKRFMDLESEEGKEMRRRAKELQEICRGAIAKGGSSDTNLDAFIRDI 455
|
Length = 459 |
| >gnl|CDD|215127 PLN02210, PLN02210, UDP-glucosyl transferase | Back alignment and domain information |
|---|
Score = 196 bits (500), Expect = 1e-57
Identities = 143/480 (29%), Positives = 236/480 (49%), Gaps = 54/480 (11%)
Query: 3 RQPHVLVIPYPAQGHVAPLMKLA--TKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSS 60
++ HVL++ QGH+ P++KLA ++ + + T+ T+ L E
Sbjct: 7 QETHVLMVTLAFQGHINPMLKLAKHLSLSSKNLHFTLATTEQAR-----DLLSTVEKPRR 61
Query: 61 QIKLVTIPDGLELQAADREDPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVT 120
+ LV DGL D P L +S+ + L +IE+ S C+I+
Sbjct: 62 PVDLVFFSDGLPKD--DPRAPETLLKSLNKVGAKNLSKIIEEKRYS-------CIISSPF 112
Query: 121 VGSALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGIIDPNGFAILNDGLISLSDEI 180
VA + I A + G+ ++ ++ + N F L D ++ + E+
Sbjct: 113 TPWVPAVAAAHNIPCAILWIQACGAYSVYYRY-------YMKTNSFPDLED--LNQTVEL 163
Query: 181 PAWK----RNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDS----PAC 232
PA R+ ++ P + L+ ++ VK W++ NS YEL+S
Sbjct: 164 PALPLLEVRDLPSFMLPSGGAHFNNLMAEFADCLRYVK---WVLVNSFYELESEIIESMA 220
Query: 233 DLIPNILPIGPL-----LASNHSGDLDG---NFWSEDSSCLSWLDEQAIRSVVYVAFGSV 284
DL P ++PIGPL L + LDG + D C+ WLD+QA SVVY++FGS+
Sbjct: 221 DLKP-VIPIGPLVSPFLLGDDEEETLDGKNLDMCKSDDCCMEWLDKQARSSVVYISFGSM 279
Query: 285 AVLSQQQFAELALGLESLQKPFLWVIRQDFMNGSRAKFPDGFIERVSN-RGKIVEWAPQE 343
+ Q +A L++ PFLWVIR +A+ E V +G ++EW+PQE
Sbjct: 280 LESLENQVETIAKALKNRGVPFLWVIRPK----EKAQNVQVLQEMVKEGQGVVLEWSPQE 335
Query: 344 KVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADE 403
K+L H +++CF++HCGWNST+E + GVP + +P ++DQ + + + + IG++ D
Sbjct: 336 KILSHMAISCFVTHCGWNSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDA 395
Query: 404 -NGIITRQEIQRKVLTLLKND---DIRSNSLKLKEVARKSLLGGGSSFRNFESFISDIKM 459
+G + +E++R + + + DIR + +LK VAR +L GGSS RN + FISDI +
Sbjct: 396 VDGELKVEEVERCIEAVTEGPAAADIRRRAAELKHVARLALAPGGSSARNLDLFISDITI 455
|
Length = 456 |
| >gnl|CDD|178584 PLN03007, PLN03007, UDP-glucosyltransferase family protein | Back alignment and domain information |
|---|
Score = 177 bits (450), Expect = 4e-50
Identities = 132/507 (26%), Positives = 232/507 (45%), Gaps = 82/507 (16%)
Query: 2 SRQPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQF---IHKKIIASLQEKAEDS 58
+ H+L P+ A GH+ P + +A + R K T++ T I +K I + +
Sbjct: 3 HEKLHILFFPFMAHGHMIPTLDMAKLFSSRGAKSTILTTPLNAKIFEKPIEAFKNLNPGL 62
Query: 59 SSQIKLVT-------IPDGLE-------LQAADRED-PLKLGESVARAMRGCLRDLIEKI 103
I++ +P+G E D D LK S + + L L+E
Sbjct: 63 EIDIQIFNFPCVELGLPEGCENVDFITSNNNDDSGDLFLKFLFST-KYFKDQLEKLLETT 121
Query: 104 NQSNDCEPIRCVIADVTVGSALEVAESMGIARAAVVPFGPGSLAL------SLQFPKLLE 157
C++AD+ A E AE G+ R +V G G +L + P+
Sbjct: 122 RPD-------CLVADMFFPWATEAAEKFGVPR--LVFHGTGYFSLCASYCIRVHKPQKKV 172
Query: 158 AGIIDPNGFAI--LNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKI 215
A +P F I L ++ ++I ++ E+ + + V ++
Sbjct: 173 ASSSEP--FVIPDLPGDIVITEEQI-------------NDADEESPMGKFMKEVRESEVK 217
Query: 216 SNWIINNSVYELDSPACDLIPNILP-----IGPLLASNH----------SGDLDGNFWSE 260
S ++ NS YEL+S D + + IGPL N ++D
Sbjct: 218 SFGVLVNSFYELESAYADFYKSFVAKRAWHIGPLSLYNRGFEEKAERGKKANID------ 271
Query: 261 DSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALGLESLQKPFLWVIRQDFMNGSRA 320
+ CL WLD + SV+Y++FGSVA +Q E+A GLE + F+WV+R++ G +
Sbjct: 272 EQECLKWLDSKKPDSVIYLSFGSVASFKNEQLFEIAAGLEGSGQNFIWVVRKNENQGEKE 331
Query: 321 KF-PDGFIERVSNRGKIVE-WAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPY 378
++ P+GF ER +G I+ WAPQ +L H + F++HCGWNS +EG++ G+P + WP
Sbjct: 332 EWLPEGFEERTKGKGLIIRGWAPQVLILDHQATGGFVTHCGWNSLLEGVAAGLPMVTWPV 391
Query: 379 FSDQYQNRNYICEAWKIGLQFFADEN-----GIITRQEIQ---RKVLTLLKNDDIRSNSL 430
++Q+ N + + + G+ A + I+R++++ R+V+ + ++ R +
Sbjct: 392 GAEQFYNEKLVTQVLRTGVSVGAKKLVKVKGDFISREKVEKAVREVIVGEEAEERRLRAK 451
Query: 431 KLKEVARKSLLGGGSSFRNFESFISDI 457
KL E+A+ ++ GGSSF + F+ ++
Sbjct: 452 KLAEMAKAAVEEGGSSFNDLNKFMEEL 478
|
Length = 482 |
| >gnl|CDD|177813 PLN02152, PLN02152, indole-3-acetate beta-glucosyltransferase | Back alignment and domain information |
|---|
Score = 174 bits (443), Expect = 2e-49
Identities = 138/486 (28%), Positives = 222/486 (45%), Gaps = 66/486 (13%)
Query: 4 QPHVLVIPYPAQGHVAPLMKLATKIAER-AIKVTVVN-TQFIHKKIIASLQEKAEDSSSQ 61
PH L++ +PAQGHV P ++ A ++ + +VT IH+ +I + E+ S
Sbjct: 3 PPHFLLVTFPAQGHVNPSLRFARRLIKTTGTRVTFATCLSVIHRSMIPN-HNNVENLS-- 59
Query: 62 IKLVTIPDGLELQA-ADREDPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVT 120
+T DG + ++ +D + R L D IE N + D P+ C+I +
Sbjct: 60 --FLTFSDGFDDGVISNTDDVQNRLVNFERNGDKALSDFIEA-NLNGD-SPVTCLIYTIL 115
Query: 121 VGSALEVAESMGIARAA--VVP-----------FGPGSLALSLQFPKLLEAGIIDPNGFA 167
A +VA + + P G S+ +FP L I D F
Sbjct: 116 PNWAPKVARRFHLPSVLLWIQPAFVFDIYYNYSTGNNSV---FEFPNLPSLEIRDLPSF- 171
Query: 168 ILNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYEL 227
L + A + F E S KIL+ N+ L
Sbjct: 172 -----LSPSNTNKAAQAVYQELMEFLKEESNPKILV------------------NTFDSL 208
Query: 228 DSPACDLIPNI--LPIGPLLASN-HSGDLDGNFWSED---SSCLSWLDEQAIRSVVYVAF 281
+ IPNI + +GPLL + +G G S SS WLD + SV+YV+F
Sbjct: 209 EPEFLTAIPNIEMVAVGPLLPAEIFTGSESGKDLSVRDQSSSYTLWLDSKTESSVIYVSF 268
Query: 282 GSVAVLSQQQFAELALGLESLQKPFLWVIRQDFMNGSRAKFPD--------GFIERVSNR 333
G++ LS++Q ELA L ++PFLWVI ++ + + GF +
Sbjct: 269 GTMVELSKKQIEELARALIEGKRPFLWVITDKLNREAKIEGEEETEIEKIAGFRHELEEV 328
Query: 334 GKIVEWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAW 393
G IV W Q +VL H +V CF++HCGW+S++E L +GVP + +P +SDQ N + E W
Sbjct: 329 GMIVSWCSQIEVLRHRAVGCFVTHCGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIW 388
Query: 394 KIGLQFFADENGIITRQEIQRKVLTLL--KNDDIRSNSLKLKEVARKSLLGGGSSFRNFE 451
K G++ + G++ R EI+R + ++ K+ ++R ++ K K +A ++ GGSS +N E
Sbjct: 389 KTGVRVRENSEGLVERGEIRRCLEAVMEEKSVELRESAEKWKRLAIEAGGEGGSSDKNVE 448
Query: 452 SFISDI 457
+F+ +
Sbjct: 449 AFVKTL 454
|
Length = 455 |
| >gnl|CDD|178581 PLN03004, PLN03004, UDP-glycosyltransferase | Back alignment and domain information |
|---|
Score = 167 bits (424), Expect = 9e-47
Identities = 85/243 (34%), Positives = 138/243 (56%), Gaps = 15/243 (6%)
Query: 216 SNWIINNSVYELDSPACDLI------PNILPIGPLLASNHSGDLDGNFWSEDSSCLSWLD 269
S+ II N+ L++ A I NI PIGPL+ + D + N + SCL+WLD
Sbjct: 209 SSGIIINTFDALENRAIKAITEELCFRNIYPIGPLIVNGRIEDRNDN---KAVSCLNWLD 265
Query: 270 EQAIRSVVYVAFGSVAVLSQQQFAELALGLESLQKPFLWVIRQ--DFMNGS---RAKFPD 324
Q +SVV++ FGS+ + S++Q E+A+GLE + FLWV+R + ++ P+
Sbjct: 266 SQPEKSVVFLCFGSLGLFSKEQVIEIAVGLEKSGQRFLWVVRNPPELEKTELDLKSLLPE 325
Query: 325 GFIERVSNRGKIVE-WAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQY 383
GF+ R ++G +V+ WAPQ VL H +V F++HCGWNS +E + GVP + WP +++Q
Sbjct: 326 GFLSRTEDKGMVVKSWAPQVPVLNHKAVGGFVTHCGWNSILEAVCAGVPMVAWPLYAEQR 385
Query: 384 QNRNYICEAWKIGLQFFADENGIITRQEIQRKVLTLLKNDDIRSNSLKLKEVARKSLLGG 443
NR I + KI + E G ++ E++++V ++ +R ++ +K A +L
Sbjct: 386 FNRVMIVDEIKIAISMNESETGFVSSTEVEKRVQEIIGECPVRERTMAMKNAAELALTET 445
Query: 444 GSS 446
GSS
Sbjct: 446 GSS 448
|
Length = 451 |
| >gnl|CDD|215112 PLN02167, PLN02167, UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Score = 165 bits (420), Expect = 7e-46
Identities = 88/256 (34%), Positives = 137/256 (53%), Gaps = 21/256 (8%)
Query: 219 IINNSVYELDSPACDLI-------PNILPIGPLLASN--HSGDLDGNFWSEDSSCLSWLD 269
I+ NS EL+ A D P + P+GP+L+ S +LD S+ + WLD
Sbjct: 219 ILVNSFTELEPNAFDYFSRLPENYPPVYPVGPILSLKDRTSPNLDS---SDRDRIMRWLD 275
Query: 270 EQAIRSVVYVAFGSVAVLSQQQFAELALGLESLQKPFLWVIRQDFMNGSRAKF---PDGF 326
+Q SVV++ FGS+ L Q E+A LE + FLW IR + + + P+GF
Sbjct: 276 DQPESSVVFLCFGSLGSLPAPQIKEIAQALELVGCRFLWSIRTN-PAEYASPYEPLPEGF 334
Query: 327 IERVSNRGKIVEWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNR 386
++RV RG + WAPQ ++L H ++ F+SHCGWNS +E L GVP WP +++Q N
Sbjct: 335 MDRVMGRGLVCGWAPQVEILAHKAIGGFVSHCGWNSVLESLWFGVPIATWPMYAEQQLNA 394
Query: 387 NYICE----AWKIGLQFFADENGIITRQEIQRKVLTLLKNDDIRSNSLK-LKEVARKSLL 441
+ + A ++ L + + I+ EI V +L+ +D+ +K + E ARK+++
Sbjct: 395 FTMVKELGLAVELRLDYVSAYGEIVKADEIAGAVRSLMDGEDVPRKKVKEIAEAARKAVM 454
Query: 442 GGGSSFRNFESFISDI 457
GGSSF + FI D+
Sbjct: 455 DGGSSFVAVKRFIDDL 470
|
Length = 475 |
| >gnl|CDD|215465 PLN02863, PLN02863, UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Score = 165 bits (419), Expect = 9e-46
Identities = 129/487 (26%), Positives = 220/487 (45%), Gaps = 53/487 (10%)
Query: 1 MSRQPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSS 60
HVLV P+PAQGH+ PL+ L ++A R + +TV+ T K + L S
Sbjct: 6 KPAGTHVLVFPFPAQGHMIPLLDLTHRLALRGLTITVLVT----PKNLPFLNPLLSKHPS 61
Query: 61 QIKLV-------TIPDGLELQAADREDPLKLGESVARAMRGCLRDLIEKINQSNDCEPIR 113
LV +IP G+E ++ P + A+ L+ +S+ P+
Sbjct: 62 IETLVLPFPSHPSIPSGVE---NVKDLPPSGFPLMIHALGELYAPLLSWF-RSHPSPPV- 116
Query: 114 CVIADVTVGSALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGIIDPNGFAILNDGL 173
+I+D+ +G +A +GI R P G +L++ + + I + IL+
Sbjct: 117 AIISDMFLGWTQNLACQLGIRRFVFSPSGAMALSIMYSLWREMPTKINPDDQNEILSFSK 176
Query: 174 ISLSDEIPAWK---------RNEYTWSFPDEPSEQKILLGIICAVIQAVKISNW-IINNS 223
I + P W+ + W F + I ++W ++ NS
Sbjct: 177 IPNCPKYPWWQISSLYRSYVEGDPAWEFIKDSFRANI--------------ASWGLVVNS 222
Query: 224 VYELDSPACDLIPNIL------PIGPLLASNH--SGDLDGNFWSEDS--SCLSWLDEQAI 273
EL+ + + L +GP+L + SG ++ S S ++WLD
Sbjct: 223 FTELEGIYLEHLKKELGHDRVWAVGPILPLSGEKSGLMERGGPSSVSVDDVMTWLDTCED 282
Query: 274 RSVVYVAFGSVAVLSQQQFAELALGLESLQKPFLWVIRQDFMNGS-RAKFPDGFIERVSN 332
VVYV FGS VL+++Q LA GLE F+W +++ S + P GF +RV+
Sbjct: 283 HKVVYVCFGSQVVLTKEQMEALASGLEKSGVHFIWCVKEPVNEESDYSNIPSGFEDRVAG 342
Query: 333 RGKIVE-WAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICE 391
RG ++ WAPQ +L H +V F++HCGWNS +EGL GVP L WP +DQ+ N + + +
Sbjct: 343 RGLVIRGWAPQVAILSHRAVGAFLTHCGWNSVLEGLVAGVPMLAWPMAADQFVNASLLVD 402
Query: 392 AWKIGLQFFADENGIITRQEIQRKV-LTLLKNDDIRSNSLKLKEVARKSLLGGGSSFRNF 450
K+ ++ + + E+ R ++ +N R + +L+ A ++ GSS ++
Sbjct: 403 ELKVAVRVCEGADTVPDSDELARVFMESVSENQVERERAKELRRAALDAIKERGSSVKDL 462
Query: 451 ESFISDI 457
+ F+ +
Sbjct: 463 DGFVKHV 469
|
Length = 477 |
| >gnl|CDD|215304 PLN02554, PLN02554, UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Score = 163 bits (413), Expect = 6e-45
Identities = 129/490 (26%), Positives = 215/490 (43%), Gaps = 61/490 (12%)
Query: 10 IPYPAQGHVAPLMKLATKIAER--AIKVTVVNTQFIHK------KIIASLQEKAEDSSSQ 61
IP P GH+ P ++LA + + + +TV+ IASL +ED +
Sbjct: 8 IPSPGIGHLRPTVELAKLLVDSDDRLSITVIIIPSRSGDDASSSAYIASLSASSED---R 64
Query: 62 IKLVTIPDGLELQAADREDPLKLGESVARAMRGCLRDLIEKINQSNDCEP---IRCVIAD 118
++ I G + D +S + +RD + K+ + + + D
Sbjct: 65 LRYEVISAGDQPTTED-----PTFQSYIDNQKPKVRDAVAKLVDDSSTPSSPRLAGFVVD 119
Query: 119 VTVGSALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGIIDPNGFAILNDGLISLSD 178
+ S ++VA G+ L L L L + D + D + L
Sbjct: 120 MFCTSMIDVANEFGVPSYMFYTSNATFLGLQLHVQMLYDEKKYDVSELE---DSEVEL-- 174
Query: 179 EIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKI--SNWIINNSVYELDSPACDL-- 234
++P+ R P ++ L + QA + I+ N+V EL+ A
Sbjct: 175 DVPSLTRPYPVKCLPSVLLSKEWLPLF---LAQARRFREMKGILVNTVAELEPQALKFFS 231
Query: 235 -----IPNILPIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQ 289
+P + P+GP+L +SGD + + S L WLDEQ +SVV++ FGS+ S+
Sbjct: 232 GSSGDLPPVYPVGPVLHLENSGDDSKD--EKQSEILRWLDEQPPKSVVFLCFGSMGGFSE 289
Query: 290 QQFAELALGLESLQKPFLWVIRQDFMNGSRAK----------FPDGFIERVSNRGKIVEW 339
+Q E+A+ LE FLW +R+ N + P+GF++R + GK++ W
Sbjct: 290 EQAREIAIALERSGHRFLWSLRRASPNIMKEPPGEFTNLEEILPEGFLDRTKDIGKVIGW 349
Query: 340 APQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGL-- 397
APQ VL ++ F++HCGWNS +E L GVP WP +++Q N + E ++GL
Sbjct: 350 APQVAVLAKPAIGGFVTHCGWNSILESLWFGVPMAAWPLYAEQKFNAFEMVE--ELGLAV 407
Query: 398 --------QFFADENGIITRQEIQRKVLTLLKND-DIRSNSLKLKEVARKSLLGGGSSFR 448
A E +T +EI+R + L++ D D+R ++ E +L+ GGSS
Sbjct: 408 EIRKYWRGDLLAGEMETVTAEEIERGIRCLMEQDSDVRKRVKEMSEKCHVALMDGGSSHT 467
Query: 449 NFESFISDIK 458
+ FI D+
Sbjct: 468 ALKKFIQDVT 477
|
Length = 481 |
| >gnl|CDD|178572 PLN02992, PLN02992, coniferyl-alcohol glucosyltransferase | Back alignment and domain information |
|---|
Score = 160 bits (407), Expect = 4e-44
Identities = 132/478 (27%), Positives = 215/478 (44%), Gaps = 61/478 (12%)
Query: 4 QPHVLVIPYPAQGHVAPLMKLATKI-AERAIKVTVVNTQFIHKKIIASLQEKAEDSSS-Q 61
+PH + P GHV P+++L ++ A VTV F+ + AS Q K +S+
Sbjct: 5 KPHAAMFSSPGMGHVIPVIELGKRLSANHGFHVTV----FVLETDAASAQSKFLNSTGVD 60
Query: 62 IKLVTIPDGLELQAADREDPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTV 121
I + PD L K+G + R LR I +++Q +P +I D+
Sbjct: 61 IVGLPSPDISGLVDPSAHVVTKIG-VIMREAVPTLRSKIAEMHQ----KPT-ALIVDLFG 114
Query: 122 GSALEVAESMGIARAAVVPFGPGSLALSLQFPKL----LEAGIIDPNGFAILNDGLISLS 177
AL + + + L +S+ +P L E + A+ +
Sbjct: 115 TDALCLGGEFNMLTYIFIASNARFLGVSIYYPTLDKDIKEEHTVQRKPLAMPGCEPVRFE 174
Query: 178 DEIPAWKRNEYTWSFPDEPSEQKIL-LGIICAVIQAVKISNW--IINNSVYELDSPA--- 231
D + A+ PDEP + + G+ + ++ W + S+ L P
Sbjct: 175 DTLDAY-------LVPDEPVYRDFVRHGLAYPKADGILVNTWEEMEPKSLKSLQDPKLLG 227
Query: 232 -CDLIPNILPIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQ 290
+P + PIGPL S D L WL++Q SV+Y++FGS LS +
Sbjct: 228 RVARVP-VYPIGPLCRPIQSS-------KTDHPVLDWLNKQPNESVLYISFGSGGSLSAK 279
Query: 291 QFAELALGLESLQKPFLWVIR--------QDFM--NGSRAK------FPDGFIERVSNRG 334
Q ELA GLE Q+ F+WV+R + NG + P+GF+ R +RG
Sbjct: 280 QLTELAWGLEMSQQRFVWVVRPPVDGSACSAYFSANGGETRDNTPEYLPEGFVSRTHDRG 339
Query: 335 KIV-EWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAW 393
+V WAPQ ++L H +V F++HCGW+ST+E + GVP + WP F++Q N + +
Sbjct: 340 FVVPSWAPQAEILAHQAVGGFLTHCGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDEL 399
Query: 394 KIGLQFFADENGIITRQEIQ---RKVLTLLKNDDIRSNSLKLKEVARKSLL--GGGSS 446
I ++ D +I+R +I+ RKV+ + +++R KL++ A SL GGG +
Sbjct: 400 GIAVR-SDDPKEVISRSKIEALVRKVMVEEEGEEMRRKVKKLRDTAEMSLSIDGGGVA 456
|
Length = 481 |
| >gnl|CDD|178589 PLN03015, PLN03015, UDP-glucosyl transferase | Back alignment and domain information |
|---|
Score = 154 bits (389), Expect = 1e-41
Identities = 126/493 (25%), Positives = 228/493 (46%), Gaps = 82/493 (16%)
Query: 4 QPHVLVIPYPAQGHVAPLMKLATKIAE-RAIKVTVV----------NTQFIHKKIIASLQ 52
QPH L++ P GH+ P+++L +++ I VT++ T+ IH +
Sbjct: 3 QPHALLVASPGLGHLIPILELGNRLSSVLNIHVTILAVTSGSSSPTETEAIHAAAARTTC 62
Query: 53 EKAEDSSSQIKLVTIPDGLELQAADREDPLKLGESVARAMRGCLRDLIEKINQSNDCEPI 112
+ E S + + PD RAM+ +RD ++ + + +P
Sbjct: 63 QITEIPSVDVDNLVEPDATIFTKM---------VVKMRAMKPAVRDAVKSMKR----KPT 109
Query: 113 RCVIADVTVGSALEVAESMGI-ARAAVVPFGPGSLALSLQFP---KLLEAGIIDPNGFAI 168
+I D + + +A+ +G+ A+ +P LA+ + P ++E +D
Sbjct: 110 -VMIVDFFGTALMSIADDVGVTAKYVYIPSHAWFLAVMVYLPVLDTVVEGEYVD------ 162
Query: 169 LNDGLISLSDEIPAWK---RNEYTWSFPDEPSEQK---ILLGIICAVIQAVKISNW--II 220
I +IP K E + D +Q + G+ + V ++ W +
Sbjct: 163 -----IKEPLKIPGCKPVGPKELMETMLDRSDQQYKECVRSGLEVPMSDGVLVNTWEELQ 217
Query: 221 NNSVYELDSPACDL-----IPNILPIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRS 275
N++ L +L +P + PIGP++ +N + + +S WLD+Q RS
Sbjct: 218 GNTLAALREDM-ELNRVMKVP-VYPIGPIVRTNVHVE-------KRNSIFEWLDKQGERS 268
Query: 276 VVYVAFGSVAVLSQQQFAELALGLESLQKPFLWVIRQ--DFMNGSR-------AKFPDGF 326
VVYV GS L+ +Q ELA GLE + F+WV+R+ ++ S A P+GF
Sbjct: 269 VVYVCLGSGGTLTFEQTVELAWGLELSGQRFVWVLRRPASYLGASSSDDDQVSASLPEGF 328
Query: 327 IERVSNRGKIV-EWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQN 385
++R G +V +WAPQ ++L H S+ F+SHCGW+S +E L+ GVP + WP +++Q+ N
Sbjct: 329 LDRTRGVGLVVTQWAPQVEILSHRSIGGFLSHCGWSSVLESLTKGVPIVAWPLYAEQWMN 388
Query: 386 RNYICEAWKIGLQFFADE---NGIITRQEIQRKVLTLLKNDD-----IRSNSLKLKEVAR 437
+ E +IG+ E +I R+E+ V ++ +D IR+ + +++ +
Sbjct: 389 ATLLTE--EIGVAVRTSELPSEKVIGREEVASLVRKIVAEEDEEGQKIRAKAEEVRVSSE 446
Query: 438 KSLLGGGSSFRNF 450
++ GGSS+ +
Sbjct: 447 RAWSHGGSSYNSL 459
|
Length = 470 |
| >gnl|CDD|177857 PLN02207, PLN02207, UDP-glycosyltransferase | Back alignment and domain information |
|---|
Score = 154 bits (389), Expect = 1e-41
Identities = 125/483 (25%), Positives = 229/483 (47%), Gaps = 49/483 (10%)
Query: 3 RQPHVLVIPYPAQGHVAPLMKLATKIAER--AIKVTVVNTQFIHKKIIASLQEKAEDSSS 60
R ++ IP P GH+ P ++ A ++ E+ I++T++ + + + + + S
Sbjct: 2 RNAELIFIPTPTVGHLVPFLEFARRLIEQDDRIRITILLMKLQGQSHLDTYVKSIASSQP 61
Query: 61 QIKLVTIPDGLELQAADREDPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVT 120
++ + +P EL+ E P LG + +++ + D+IEK + +R ++ D+
Sbjct: 62 FVRFIDVP---ELE----EKP-TLGGT--QSVEAYVYDVIEK-----NIPLVRNIVMDIL 106
Query: 121 VGSALEVAESMG-IARAAVVPFGPGSLALSLQFPKLLEAGIIDPNGF-AILNDGLISLSD 178
AL+ + G +A +P + +SL F L +GF A++ S
Sbjct: 107 SSLALDGVKVKGFVADFFCLPMIDVAKDVSLPFYVFLTTN----SGFLAMMQYLADRHSK 162
Query: 179 EIPAWKRN-EYTWSFPD--EPSEQKIL---LGIICAVIQAVKIS------NWIINNSVYE 226
+ + RN E S P P +L L + VK++ N I+ NS ++
Sbjct: 163 DTSVFVRNSEEMLSIPGFVNPVPANVLPSALFVEDGYDAYVKLAILFTKANGILVNSSFD 222
Query: 227 LDSPACDLI------PNILPIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVA 280
++ + + P++ +GP+ + + D + WLD+Q SVV++
Sbjct: 223 IEPYSVNHFLDEQNYPSVYAVGPIFDLKAQPHPEQDLARRDEL-MKWLDDQPEASVVFLC 281
Query: 281 FGSVAVLSQQQFAELALGLESLQKPFLWVIRQDFMNGSRAKFPDGFIERVSNRGKIVEWA 340
FGS+ L E+A GLE Q FLW +R + + P+GF++RVS RG I W+
Sbjct: 282 FGSMGRLRGPLVKEIAHGLELCQYRFLWSLRTEEVTNDDL-LPEGFLDRVSGRGMICGWS 340
Query: 341 PQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFF 400
PQ ++L H +V F+SHCGWNS +E L GVP + WP +++Q N + + K+ ++
Sbjct: 341 PQVEILAHKAVGGFVSHCGWNSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELK 400
Query: 401 AD----ENGIITRQEIQRKVLTLLKNDD--IRSNSLKLKEVARKSLLGGGSSFRNFESFI 454
D + I+ EI+ + ++ D+ +R + + ++ +++ GGSSF E FI
Sbjct: 401 LDYRVHSDEIVNANEIETAIRCVMNKDNNVVRKRVMDISQMIQRATKNGGSSFAAIEKFI 460
Query: 455 SDI 457
D+
Sbjct: 461 HDV 463
|
Length = 468 |
| >gnl|CDD|215293 PLN02534, PLN02534, UDP-glycosyltransferase | Back alignment and domain information |
|---|
Score = 146 bits (370), Expect = 9e-39
Identities = 85/244 (34%), Positives = 131/244 (53%), Gaps = 22/244 (9%)
Query: 241 IGPL-LASNHSGDL--DGNFWSED-SSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELA 296
+GP+ L + + D GN S D + CL WLD RSV+Y GS+ L Q EL
Sbjct: 246 VGPVSLCNKRNLDKFERGNKASIDETQCLEWLDSMKPRSVIYACLGSLCRLVPSQLIELG 305
Query: 297 LGLESLQKPFLWVIR--QDFMNGSRAKFPDGFIERVSNRGKIVE-WAPQEKVLGHSSVAC 353
LGLE+ +KPF+WVI+ + + F ER+ RG +++ WAPQ +L H ++
Sbjct: 306 LGLEASKKPFIWVIKTGEKHSELEEWLVKENFEERIKGRGLLIKGWAPQVLILSHPAIGG 365
Query: 354 FISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQF-------FADENGI 406
F++HCGWNST+EG+ GVP + WP F++Q+ N I E +IG++ + DE +
Sbjct: 366 FLTHCGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIGVRVGVEVPVRWGDEERV 425
Query: 407 ---ITRQEIQRKVLTLLKNDD-----IRSNSLKLKEVARKSLLGGGSSFRNFESFISDIK 458
+ + E+++ V TL+ + R + +L +ARK++ GGSS N I D+
Sbjct: 426 GVLVKKDEVEKAVKTLMDDGGEEGERRRRRAQELGVMARKAMELGGSSHINLSILIQDVL 485
Query: 459 MLIS 462
S
Sbjct: 486 KQQS 489
|
Length = 491 |
| >gnl|CDD|178275 PLN02670, PLN02670, transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Score = 137 bits (346), Expect = 1e-35
Identities = 81/213 (38%), Positives = 113/213 (53%), Gaps = 14/213 (6%)
Query: 238 ILPIG---PLLASNHSGD-LDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFA 293
I+PIG P++ + D +D W WLD+Q + SVVYVA G+ A L +++
Sbjct: 241 IIPIGFLPPVIEDDEEDDTIDVKGWVR---IKEWLDKQRVNSVVYVALGTEASLRREEVT 297
Query: 294 ELALGLESLQKPFLWVIRQDFMNGSRA--KFPDGFIERVSNRGKI-VEWAPQEKVLGHSS 350
ELALGLE + PF WV+R + A PDGF ERV RG I V W PQ K+L H S
Sbjct: 298 ELALGLEKSETPFFWVLRNEPGTTQNALEMLPDGFEERVKGRGMIHVGWVPQVKILSHES 357
Query: 351 VACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADE-NGIITR 409
V F++HCGWNS +EGL G + +P ++Q N + K+GL+ DE +G T
Sbjct: 358 VGGFLTHCGWNSVVEGLGFGRVLILFPVLNEQGLNTRLL-HGKKLGLEVPRDERDGSFTS 416
Query: 410 QEIQRKVLTLLKNDDIRSNSLKLKEVARKSLLG 442
+ V + +D K KE+ ++L G
Sbjct: 417 DSVAESVRLAMVDDAGEEIRDKAKEM--RNLFG 447
|
Length = 472 |
| >gnl|CDD|215084 PLN00164, PLN00164, glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 135 bits (342), Expect = 7e-35
Identities = 79/266 (29%), Positives = 126/266 (47%), Gaps = 31/266 (11%)
Query: 219 IINNSVYELDSPACDLI-----------PNILPIGPLLASNHSGDLDGNFWSEDSSCLSW 267
II N+ EL+ I P + PIGP++ + + C+ W
Sbjct: 210 IIVNTAAELEPGVLAAIADGRCTPGRPAPTVYPIGPVI--SLAFTPPAE--QPPHECVRW 265
Query: 268 LDEQAIRSVVYVAFGSVAVLSQQQFAELALGLESLQKPFLWVIRQDFMNGSRAK------ 321
LD Q SVV++ FGS+ Q E+A GLE FLWV+R GSR
Sbjct: 266 LDAQPPASVVFLCFGSMGFFDAPQVREIAAGLERSGHRFLWVLRGPPAAGSRHPTDADLD 325
Query: 322 --FPDGFIERVSNRGKI-VEWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPY 378
P+GF+ER RG + WAPQ+++L H++V F++HCGWNS +E L GVP WP
Sbjct: 326 ELLPEGFLERTKGRGLVWPTWAPQKEILAHAAVGGFVTHCGWNSVLESLWHGVPMAPWPL 385
Query: 379 FSDQYQNRNYICEAWKIG--LQFFADENGIITRQEIQRKVLTLLKNDD-----IRSNSLK 431
+++Q+ N + + ++ + + E++R V +L+ + R + +
Sbjct: 386 YAEQHLNAFELVADMGVAVAMKVDRKRDNFVEAAELERAVRSLMGGGEEEGRKAREKAAE 445
Query: 432 LKEVARKSLLGGGSSFRNFESFISDI 457
+K RK++ GGSS+ + +I
Sbjct: 446 MKAACRKAVEEGGSSYAALQRLAREI 471
|
Length = 480 |
| >gnl|CDD|178364 PLN02764, PLN02764, glycosyltransferase family protein | Back alignment and domain information |
|---|
Score = 119 bits (299), Expect = 2e-29
Identities = 122/475 (25%), Positives = 210/475 (44%), Gaps = 49/475 (10%)
Query: 6 HVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQE-KAEDSSSQIKL 64
HVL+ P+ A GH+ P + LA K+AE+ VT + + KK + L+ + +
Sbjct: 7 HVLMYPWFATGHMTPFLFLANKLAEKGHTVTFL----LPKKALKQLEHLNLFPHNIVFRS 62
Query: 65 VTIP--DGLELQAAD-REDPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTV 121
VT+P DGL + E P+ + + AM RD +E + +R V D+
Sbjct: 63 VTVPHVDGLPVGTETVSEIPVTSADLLMSAM-DLTRDQVEVV--------VRAVEPDLIF 113
Query: 122 GSAL----EVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGIIDPNGFAILNDGLISLS 177
EVA G+ V ++A S+ P E G+ P G+ S
Sbjct: 114 FDFAHWIPEVARDFGLKTVKYVVVSASTIA-SMLVPGG-ELGV-PPPGYP---------S 161
Query: 178 DEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACDLI-- 235
++ K++ YT + + + ++ V ++ S+ I + E++ CD I
Sbjct: 162 SKVLLRKQDAYTMKNLEPTNTIDVGPNLLERVTTSLMNSDVIAIRTAREIEGNFCDYIEK 221
Query: 236 ---PNILPIGPLLAS-NHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQ 291
+L GP+ + + +L+ + + WL SVV+ A GS +L + Q
Sbjct: 222 HCRKKVLLTGPVFPEPDKTRELEERW-------VKWLSGYEPDSVVFCALGSQVILEKDQ 274
Query: 292 FAELALGLESLQKPFLWVIRQDFMNGS-RAKFPDGFIERVSNRGKIV-EWAPQEKVLGHS 349
F EL LG+E PFL ++ + + + P+GF ERV RG + W Q +L H
Sbjct: 275 FQELCLGMELTGSPFLVAVKPPRGSSTIQEALPEGFEERVKGRGVVWGGWVQQPLILSHP 334
Query: 350 SVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGIITR 409
SV CF+SHCG+ S E L + P DQ N + + K+ ++ +E G ++
Sbjct: 335 SVGCFVSHCGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREETGWFSK 394
Query: 410 QEIQRKVLTLLKNDDIRSNSLKLKEVA-RKSLLGGGSSFRNFESFISDIKMLISG 463
+ ++ + +++K D N +K R++L G ++FI ++ L+SG
Sbjct: 395 ESLRDAINSVMKRDSEIGNLVKKNHTKWRETLASPGLLTGYVDNFIESLQDLVSG 449
|
Length = 453 |
| >gnl|CDD|99960 cd03784, GT1_Gtf_like, This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Score = 101 bits (253), Expect = 2e-23
Identities = 81/434 (18%), Positives = 133/434 (30%), Gaps = 70/434 (16%)
Query: 5 PHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKL 64
VL+ ++G V PL+ LA + +V V + E ++ ++
Sbjct: 1 MRVLITTIGSRGDVQPLVALAWALRAAGHEVRVATP--------PEFADLVE--AAGLEF 50
Query: 65 VTIPDGLELQAADREDPLKLGESVARAMRGCLRDLIEKINQSND-----CEPIRC--VIA 117
V + + A E L + G LR L + D V+A
Sbjct: 51 VPVGGDPDELLASPERNAGLLLLGPGLLLGALRLLRREAEAMLDDLVAAARDWGPDLVVA 110
Query: 118 DVTVGSALEVAESMGI--ARAAVVPFGPGSLALSLQFPKLLEAGIIDPNGFAILNDGLIS 175
D + AE++GI R + P P S L + +
Sbjct: 111 DPLAFAGAVAAEALGIPAVRLLLGPDTPTSAFPPPLGRANLRLY------ALLEAELWQD 164
Query: 176 LSDEIPAWKRNEYTWS--FPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACD 233
L +R + S+ L G AV+ P D
Sbjct: 165 LLGAWLRARRRRLGLPPLSLLDGSDVPELYGFSPAVL------------------PPPPD 206
Query: 234 LIPNILPIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFA 293
L G D+ N +L R VYV FGS+ V + A
Sbjct: 207 WPRFDLVTGYGF-----RDVPYN-GPPPPELWLFLAAG--RPPVYVGFGSMVVRDPEALA 258
Query: 294 ELAL-GLESLQKPFLWVIRQDFMNGSRAKFPDGFIERVSNRGKIVEWAPQEKVLGHSSVA 352
L + + +L + + S G + + + ++V++ P + +L A
Sbjct: 259 RLDVEAVATLGQRAIL---------SLGWGGLGAED-LPDNVRVVDFVPHDWLLPR--CA 306
Query: 353 CFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGIITRQEI 412
+ H G +T L GVP L P+F DQ + G E +T + +
Sbjct: 307 AVVHHGGAGTTAAALRAGVPQLVVPFFGDQPFWAARV-AELGAGPALDPRE---LTAERL 362
Query: 413 QRKVLTLLKNDDIR 426
+ LL R
Sbjct: 363 AAALRRLLDPPSRR 376
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. Length = 401 |
| >gnl|CDD|177807 PLN00414, PLN00414, glycosyltransferase family protein | Back alignment and domain information |
|---|
Score = 100 bits (250), Expect = 7e-23
Identities = 119/472 (25%), Positives = 188/472 (39%), Gaps = 91/472 (19%)
Query: 1 MSRQPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQE-KAEDSS 59
M + H + P+ GH+ P + LA K+AE+ +VT F+ KK LQ S
Sbjct: 1 MGSKFHAFMYPWFGFGHMIPYLHLANKLAEKGHRVTF----FLPKKAHKQLQPLNLFPDS 56
Query: 60 SQIKLVTIP--DGLELQAADRED-PLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVI 116
+ +T+P DGL A D P + + AM LRD IE +R +
Sbjct: 57 IVFEPLTLPPVDGLPFGAETASDLPNSTKKPIFDAM-DLLRDQIEA--------KVRALK 107
Query: 117 ADVT----VGSALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGIIDPNGFAILNDG 172
D+ V E+A+ GI +A+ L
Sbjct: 108 PDLIFFDFVHWVPEMAKEFGIKSVNYQIISAACVAMVLA--------------------- 146
Query: 173 LISLSDEIPAWKRNEYTWSFPDEPSEQKILLG---IICA-----------VIQAVKISNW 218
R E + PD P + L G +C+ + + +K +
Sbjct: 147 -----------PRAELGFPPPDYPLSKVALRGHDANVCSLFANSHELFGLITKGLKNCDV 195
Query: 219 IINNSVYELDSPACDLIP-----NILPIGPLL--ASNHSGDLDGNFWSEDSSCLSWLDEQ 271
+ + EL+ CD I +L GP+L N SG + W+ WL+
Sbjct: 196 VSIRTCVELEGNLCDFIERQCQRKVLLTGPMLPEPQNKSGKPLEDRWNH------WLNGF 249
Query: 272 AIRSVVYVAFGSVAVLSQQQFAELALGLESLQKPFLWVIRQDFMNGS---RAKFPDGFIE 328
SVV+ AFG+ + QF E LG+E PFL + GS + P+GF E
Sbjct: 250 EPGSVVFCAFGTQFFFEKDQFQEFCLGMELTGLPFLIAVMPP--KGSSTVQEALPEGFEE 307
Query: 329 RVSNRGKIVE-WAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRN 387
RV RG + E W Q +L H SV CF++HCG+ S E L + P +DQ
Sbjct: 308 RVKGRGIVWEGWVEQPLILSHPSVGCFVNHCGFGSMWESLVSDCQIVFIPQLADQVLITR 367
Query: 388 YICEAWKIGLQFFADENGIITRQEIQRKVLTLLKNDD-----IRSNSLKLKE 434
+ E ++ ++ +++G +++ ++ V +++ D ++ N KLKE
Sbjct: 368 LLTEELEVSVKVQREDSGWFSKESLRDTVKSVMDKDSEIGNLVKRNHKKLKE 419
|
Length = 446 |
| >gnl|CDD|177858 PLN02208, PLN02208, glycosyltransferase family protein | Back alignment and domain information |
|---|
Score = 98.2 bits (244), Expect = 4e-22
Identities = 60/222 (27%), Positives = 104/222 (46%), Gaps = 18/222 (8%)
Query: 226 ELDSPACDLIPN-----ILPIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVA 280
E++ CD I +L GP+ + WS +L +SVV+ +
Sbjct: 204 EIEGKFCDYISRQYHKKVLLTGPMFPEPDTSKPLEEQWSH------FLSGFPPKSVVFCS 257
Query: 281 FGSVAVLSQQQFAELALGLESLQKPFLWVIRQDFMNGS-RAKFPDGFIERVSNRGKIVE- 338
GS +L + QF EL LG+E PFL ++ + + + P+GF ERV RG +
Sbjct: 258 LGSQIILEKDQFQELCLGMELTGLPFLIAVKPPRGSSTVQEGLPEGFEERVKGRGVVWGG 317
Query: 339 WAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQ 398
W Q +L H S+ CF++HCG + E L + P+ SDQ + E +++ ++
Sbjct: 318 WVQQPLILDHPSIGCFVNHCGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVE 377
Query: 399 FFADENGIITRQEIQRKVLTLLKNDD-----IRSNSLKLKEV 435
++ G +++ + + +++ D +RSN KLKE+
Sbjct: 378 VSREKTGWFSKESLSNAIKSVMDKDSDLGKLVRSNHTKLKEI 419
|
Length = 442 |
| >gnl|CDD|201077 pfam00201, UDPGT, UDP-glucoronosyl and UDP-glucosyl transferase | Back alignment and domain information |
|---|
Score = 98.3 bits (245), Expect = 5e-22
Identities = 47/222 (21%), Positives = 89/222 (40%), Gaps = 31/222 (13%)
Query: 214 KISNWIINNSVYELDSPACDLIPNILPIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAI 273
K S W++ N +L+ P L+PN+ IG L ++ Q+
Sbjct: 226 KASAWLLRNYW-DLEFPR-PLLPNMEFIGGLNCKP----------AKPLPQEMEAFVQSS 273
Query: 274 --RSVVYVAFGSVAV-LSQQQFAELALGLESLQKPFLWVIRQDFMNGSRAKFPDGFIERV 330
VV + GS+ + +++ E+A L + + LW G++ +
Sbjct: 274 GEHGVVVFSLGSMVSNIPEEKANEIASALAQIPQKVLWRFD-----GTKPST-------L 321
Query: 331 SNRGKIVEWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYIC 390
++V+W PQ +LGH F++H G N E + GVP + P F DQ N ++
Sbjct: 322 GRNTRLVKWLPQNDLLGHPKTRAFVTHAGSNGVYEAICHGVPMVGMPLFGDQMDNAKHME 381
Query: 391 EAWKIGLQFFADENGIITRQEIQRKVLTLLKNDDIRSNSLKL 432
+T +++ + T++ + + N ++L
Sbjct: 382 AKGAAVTLNV----LTMTSEDLLNALKTVINDPSYKENIMRL 419
|
Length = 500 |
| >gnl|CDD|224732 COG1819, COG1819, Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | Back alignment and domain information |
|---|
Score = 76.3 bits (188), Expect = 5e-15
Identities = 87/449 (19%), Positives = 151/449 (33%), Gaps = 77/449 (17%)
Query: 4 QPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIAS---LQEKAEDSSS 60
+ +L + A GHV P + L ++ R H+ + AS +E E +
Sbjct: 1 RMKILFVVCGAYGHVNPCLALGKELRRRG-----------HEVVFASTGKFKEFVEAAGL 49
Query: 61 QIKLVTIPDGLELQAADREDPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVT 120
I D + +K + + + +R+L+E E ++ D
Sbjct: 50 AFVAYPIRDSELATEDGKFAGVKSFRRLLQQFKKLIRELLE-----LLRELEPDLVVDDA 104
Query: 121 VGSALEVAESMGI--ARAAVVPFGPGSLALSLQFPKLLEAGIIDPNGFAILNDGLISLSD 178
S A +GI V P+ P A L P + AG + + + +
Sbjct: 105 RLSLGLAARLLGIPVVGINVAPYTPLPAA-GLPLPPVGIAGKLPIPLYPLP---PRLVRP 160
Query: 179 EIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACDLIPNI 238
I A + E + L I + A I ++ P D +P I
Sbjct: 161 LIFARSWLPKLVVRRNLGLE--LGLPNIRR-LFASGPLLEIA---YTDVLFPPGDRLPFI 214
Query: 239 LP-IGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELAL 297
P IGPLL + W+ A R +VYV+ G+V + + + L
Sbjct: 215 GPYIGPLL------------GEAANELPYWIP--ADRPIVYVSLGTVG--NAVELLAIVL 258
Query: 298 GLESLQKPFLWVIRQDFMNGSRAKFP-DGFIERVSNRG-----KIVEWAPQEKVLGHSSV 351
+ + R + + ++ PQ ++L +
Sbjct: 259 EA---------------LADLDVRVIVSLGGARDTLVNVPDNVIVADYVPQLELLPRADA 303
Query: 352 ACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWK-IGLQFFADENGIITRQ 410
I H G +T E L GVP + P +DQ N + E I L F +T +
Sbjct: 304 --VIHHGGAGTTSEALYAGVPLVVIPDGADQPLNAERVEELGAGIALPFEE-----LTEE 356
Query: 411 EIQRKVLTLLKNDDIRSNSLKLKEVARKS 439
++ V +L +D R + +L E ++
Sbjct: 357 RLRAAVNEVLADDSYRRAAERLAEEFKEE 385
|
Length = 406 |
| >gnl|CDD|233407 TIGR01426, MGT, glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Score = 55.5 bits (134), Expect = 2e-08
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 8/105 (7%)
Query: 339 WAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQ 398
W PQ ++L + FI+H G NSTME L GVP + P +DQ I E +G
Sbjct: 282 WVPQLEILKKADA--FITHGGMNSTMEALFNGVPMVAVPQGADQPMTARRIAEL-GLGRH 338
Query: 399 FFADENGIITRQEIQRKVLTLLKNDDIRSNSLKLKEVARKSLLGG 443
+E +T ++++ VL +L + K++ R++ GG
Sbjct: 339 LPPEE---VTAEKLREAVLAVLSDPRYAERLRKMRAEIREA--GG 378
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production [Cellular processes, Toxin production and resistance]. Length = 392 |
| >gnl|CDD|215293 PLN02534, PLN02534, UDP-glycosyltransferase | Back alignment and domain information |
|---|
Score = 55.6 bits (134), Expect = 3e-08
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 1 MSRQPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSS 60
++Q H ++IP AQGH+ P++ +A +AER + V++V T + A ++A +S
Sbjct: 5 KAKQLHFVLIPLMAQGHMIPMIDMARLLAERGVIVSLVTTPQNASR-FAKTIDRARESGL 63
Query: 61 QIKLVTIP 68
I+LV IP
Sbjct: 64 PIRLVQIP 71
|
Length = 491 |
| >gnl|CDD|223071 PHA03392, egt, ecdysteroid UDP-glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 49.6 bits (119), Expect = 2e-06
Identities = 43/186 (23%), Positives = 73/186 (39%), Gaps = 38/186 (20%)
Query: 265 LSWLDEQAIRSVVYVAFGS---VAVLSQQQFAELALGLESLQKPFLWVIRQDFMNGSRAK 321
L + VVYV+FGS + + L + L LW K
Sbjct: 287 LEEFLNNSTNGVVYVSFGSSIDTNDMDNEFLQMLLRTFKKLPYNVLW------------K 334
Query: 322 FPDGFIERVSNRGKIV--EWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYF 379
+ DG +E ++ ++ +W PQ VL H +V F++ G ST E + VP + P
Sbjct: 335 Y-DGEVEAINLPANVLTQKWFPQRAVLKHKNVKAFVTQGGVQSTDEAIDALVPMVGLPMM 393
Query: 380 SDQYQNRNYICEAWKIGLQFFADENGI--------ITRQEIQRKVLTLLKNDDIRSNSLK 431
DQ+ N N E GI ++ ++ ++ +++N R N +
Sbjct: 394 GDQFYNTNKY------------VELGIGRALDTVTVSAAQLVLAIVDVIENPKYRKNLKE 441
Query: 432 LKEVAR 437
L+ + R
Sbjct: 442 LRHLIR 447
|
Length = 507 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 468 | |||
| PLN02562 | 448 | UDP-glycosyltransferase | 100.0 | |
| PLN02410 | 451 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 100.0 | |
| PLN02173 | 449 | UDP-glucosyl transferase family protein | 100.0 | |
| PLN02555 | 480 | limonoid glucosyltransferase | 100.0 | |
| PLN02207 | 468 | UDP-glycosyltransferase | 100.0 | |
| PLN02210 | 456 | UDP-glucosyl transferase | 100.0 | |
| PLN02152 | 455 | indole-3-acetate beta-glucosyltransferase | 100.0 | |
| PLN02863 | 477 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 100.0 | |
| PLN02554 | 481 | UDP-glycosyltransferase family protein | 100.0 | |
| PLN02992 | 481 | coniferyl-alcohol glucosyltransferase | 100.0 | |
| PLN02670 | 472 | transferase, transferring glycosyl groups | 100.0 | |
| PLN02448 | 459 | UDP-glycosyltransferase family protein | 100.0 | |
| PLN03007 | 482 | UDP-glucosyltransferase family protein | 100.0 | |
| PLN00164 | 480 | glucosyltransferase; Provisional | 100.0 | |
| PLN02208 | 442 | glycosyltransferase family protein | 100.0 | |
| PLN03004 | 451 | UDP-glycosyltransferase | 100.0 | |
| PLN02167 | 475 | UDP-glycosyltransferase family protein | 100.0 | |
| PLN02764 | 453 | glycosyltransferase family protein | 100.0 | |
| PLN02534 | 491 | UDP-glycosyltransferase | 100.0 | |
| PLN03015 | 470 | UDP-glucosyl transferase | 100.0 | |
| PLN00414 | 446 | glycosyltransferase family protein | 100.0 | |
| PHA03392 | 507 | egt ecdysteroid UDP-glucosyltransferase; Provision | 100.0 | |
| PF00201 | 500 | UDPGT: UDP-glucoronosyl and UDP-glucosyl transfera | 100.0 | |
| TIGR01426 | 392 | MGT glycosyltransferase, MGT family. This model de | 100.0 | |
| cd03784 | 401 | GT1_Gtf_like This family includes the Gtfs, a grou | 100.0 | |
| COG1819 | 406 | Glycosyl transferases, related to UDP-glucuronosyl | 100.0 | |
| KOG1192 | 496 | consensus UDP-glucuronosyl and UDP-glucosyl transf | 100.0 | |
| PF13528 | 318 | Glyco_trans_1_3: Glycosyl transferase family 1 | 99.95 | |
| PRK12446 | 352 | undecaprenyldiphospho-muramoylpentapeptide beta-N- | 99.95 | |
| TIGR00661 | 321 | MJ1255 conserved hypothetical protein. This model | 99.92 | |
| COG0707 | 357 | MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami | 99.9 | |
| PRK00726 | 357 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.89 | |
| cd03785 | 350 | GT1_MurG MurG is an N-acetylglucosaminyltransferas | 99.85 | |
| COG4671 | 400 | Predicted glycosyl transferase [General function p | 99.85 | |
| TIGR01133 | 348 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.77 | |
| TIGR00215 | 385 | lpxB lipid-A-disaccharide synthase. Lipid-A precur | 99.76 | |
| PRK13609 | 380 | diacylglycerol glucosyltransferase; Provisional | 99.75 | |
| TIGR03590 | 279 | PseG pseudaminic acid biosynthesis-associated prot | 99.73 | |
| PRK00025 | 380 | lpxB lipid-A-disaccharide synthase; Reviewed | 99.65 | |
| PRK13608 | 391 | diacylglycerol glucosyltransferase; Provisional | 99.65 | |
| PF04101 | 167 | Glyco_tran_28_C: Glycosyltransferase family 28 C-t | 99.59 | |
| PLN02605 | 382 | monogalactosyldiacylglycerol synthase | 99.55 | |
| TIGR03492 | 396 | conserved hypothetical protein. This protein famil | 99.46 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to | 99.45 | |
| PF03033 | 139 | Glyco_transf_28: Glycosyltransferase family 28 N-t | 99.43 | |
| COG3980 | 318 | spsG Spore coat polysaccharide biosynthesis protei | 99.41 | |
| PLN02871 | 465 | UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | 99.38 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related | 99.37 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 99.36 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related | 99.3 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely r | 99.3 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related | 99.3 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to | 99.29 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related | 99.28 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related | 99.27 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related | 99.26 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 99.25 | |
| PRK05749 | 425 | 3-deoxy-D-manno-octulosonic-acid transferase; Revi | 99.23 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related | 99.2 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino | 99.18 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to | 99.17 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related | 99.15 | |
| TIGR00236 | 365 | wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras | 99.15 | |
| cd03805 | 392 | GT1_ALG2_like This family is most closely related | 99.13 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related | 99.13 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 99.12 | |
| TIGR02472 | 439 | sucr_P_syn_N sucrose-phosphate synthase, putative, | 99.07 | |
| PF04007 | 335 | DUF354: Protein of unknown function (DUF354); Inte | 99.07 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related | 99.07 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related | 99.05 | |
| cd03786 | 363 | GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th | 99.02 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related | 98.98 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltran | 98.97 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related | 98.96 | |
| PLN02275 | 371 | transferase, transferring glycosyl groups | 98.95 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely rela | 98.93 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the trans | 98.93 | |
| PRK09922 | 359 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D | 98.93 | |
| PRK14089 | 347 | ipid-A-disaccharide synthase; Provisional | 98.93 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related | 98.92 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely relate | 98.91 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to | 98.91 | |
| TIGR02470 | 784 | sucr_synth sucrose synthase. This model represents | 98.88 | |
| PRK01021 | 608 | lpxB lipid-A-disaccharide synthase; Reviewed | 98.85 | |
| PLN02949 | 463 | transferase, transferring glycosyl groups | 98.83 | |
| cd04951 | 360 | GT1_WbdM_like This family is most closely related | 98.82 | |
| COG1519 | 419 | KdtA 3-deoxy-D-manno-octulosonic-acid transferase | 98.82 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related | 98.79 | |
| TIGR02149 | 388 | glgA_Coryne glycogen synthase, Corynebacterium fam | 98.75 | |
| TIGR03568 | 365 | NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, | 98.74 | |
| TIGR03087 | 397 | stp1 sugar transferase, PEP-CTERM/EpsH1 system ass | 98.73 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related | 98.71 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 98.7 | |
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system ass | 98.68 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related | 98.68 | |
| PLN02846 | 462 | digalactosyldiacylglycerol synthase | 98.65 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylas | 98.63 | |
| PF02684 | 373 | LpxB: Lipid-A-disaccharide synthetase; InterPro: I | 98.59 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related | 98.53 | |
| PF02350 | 346 | Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; | 98.49 | |
| KOG3349 | 170 | consensus Predicted glycosyltransferase [General f | 98.48 | |
| COG0381 | 383 | WecB UDP-N-acetylglucosamine 2-epimerase [Cell env | 98.46 | |
| cd04950 | 373 | GT1_like_1 Glycosyltransferases catalyze the trans | 98.44 | |
| PLN00142 | 815 | sucrose synthase | 98.44 | |
| PRK00654 | 466 | glgA glycogen synthase; Provisional | 98.41 | |
| COG0763 | 381 | LpxB Lipid A disaccharide synthetase [Cell envelop | 98.4 | |
| TIGR02095 | 473 | glgA glycogen/starch synthases, ADP-glucose type. | 98.28 | |
| PRK10017 | 426 | colanic acid biosynthesis protein; Provisional | 98.17 | |
| TIGR02918 | 500 | accessory Sec system glycosylation protein GtfA. M | 98.16 | |
| PF13844 | 468 | Glyco_transf_41: Glycosyl transferase family 41; P | 98.15 | |
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is mo | 98.12 | |
| PRK15427 | 406 | colanic acid biosynthesis glycosyltransferase WcaL | 98.03 | |
| PLN02501 | 794 | digalactosyldiacylglycerol synthase | 98.02 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to | 98.01 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related | 98.0 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related | 97.97 | |
| PF00534 | 172 | Glycos_transf_1: Glycosyl transferases group 1; In | 97.96 | |
| COG5017 | 161 | Uncharacterized conserved protein [Function unknow | 97.91 | |
| COG1817 | 346 | Uncharacterized protein conserved in archaea [Func | 97.91 | |
| PRK15484 | 380 | lipopolysaccharide 1,2-N-acetylglucosaminetransfer | 97.84 | |
| PRK15490 | 578 | Vi polysaccharide biosynthesis protein TviE; Provi | 97.79 | |
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases | 97.67 | |
| PRK10125 | 405 | putative glycosyl transferase; Provisional | 97.63 | |
| PLN02316 | 1036 | synthase/transferase | 97.63 | |
| TIGR02193 | 319 | heptsyl_trn_I lipopolysaccharide heptosyltransfera | 97.52 | |
| PF13692 | 135 | Glyco_trans_1_4: Glycosyl transferases group 1; PD | 97.36 | |
| PF13477 | 139 | Glyco_trans_4_2: Glycosyl transferase 4-like | 97.03 | |
| PRK09814 | 333 | beta-1,6-galactofuranosyltransferase; Provisional | 96.94 | |
| PRK10422 | 352 | lipopolysaccharide core biosynthesis protein; Prov | 96.87 | |
| COG3914 | 620 | Spy Predicted O-linked N-acetylglucosamine transfe | 96.79 | |
| KOG4626 | 966 | consensus O-linked N-acetylglucosamine transferase | 96.68 | |
| PF06258 | 311 | Mito_fiss_Elm1: Mitochondrial fission ELM1; InterP | 96.62 | |
| PRK10916 | 348 | ADP-heptose:LPS heptosyltransferase II; Provisiona | 96.61 | |
| PHA01633 | 335 | putative glycosyl transferase group 1 | 96.53 | |
| COG0859 | 334 | RfaF ADP-heptose:LPS heptosyltransferase [Cell env | 96.38 | |
| PF06722 | 97 | DUF1205: Protein of unknown function (DUF1205); In | 96.23 | |
| PRK10964 | 322 | ADP-heptose:LPS heptosyl transferase I; Provisiona | 96.15 | |
| TIGR02195 | 334 | heptsyl_trn_II lipopolysaccharide heptosyltransfer | 96.09 | |
| PHA01630 | 331 | putative group 1 glycosyl transferase | 96.01 | |
| PF12000 | 171 | Glyco_trans_4_3: Gkycosyl transferase family 4 gro | 95.96 | |
| cd03789 | 279 | GT1_LPS_heptosyltransferase Lipopolysaccharide hep | 95.94 | |
| TIGR02201 | 344 | heptsyl_trn_III lipopolysaccharide heptosyltransfe | 95.89 | |
| PRK14098 | 489 | glycogen synthase; Provisional | 95.73 | |
| TIGR03713 | 519 | acc_sec_asp1 accessory Sec system protein Asp1. Th | 95.52 | |
| PF13579 | 160 | Glyco_trans_4_4: Glycosyl transferase 4-like domai | 95.46 | |
| PF08660 | 170 | Alg14: Oligosaccharide biosynthesis protein Alg14 | 95.41 | |
| COG3660 | 329 | Predicted nucleoside-diphosphate-sugar epimerase [ | 95.16 | |
| PF13524 | 92 | Glyco_trans_1_2: Glycosyl transferases group 1 | 95.12 | |
| KOG2941 | 444 | consensus Beta-1,4-mannosyltransferase [Posttransl | 94.94 | |
| PF01975 | 196 | SurE: Survival protein SurE; InterPro: IPR002828 T | 94.37 | |
| PRK14099 | 485 | glycogen synthase; Provisional | 93.71 | |
| COG1618 | 179 | Predicted nucleotide kinase [Nucleotide transport | 93.48 | |
| PF10093 | 374 | DUF2331: Uncharacterized protein conserved in bact | 93.38 | |
| TIGR02400 | 456 | trehalose_OtsA alpha,alpha-trehalose-phosphate syn | 93.0 | |
| PRK13932 | 257 | stationary phase survival protein SurE; Provisiona | 92.5 | |
| TIGR02919 | 438 | accessory Sec system glycosyltransferase GtfB. Mem | 92.46 | |
| PF13439 | 177 | Glyco_transf_4: Glycosyltransferase Family 4; PDB: | 92.39 | |
| COG0438 | 381 | RfaG Glycosyltransferase [Cell envelope biogenesis | 91.5 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 91.36 | |
| cd02067 | 119 | B12-binding B12 binding domain (B12-BD). This doma | 91.33 | |
| COG0003 | 322 | ArsA Predicted ATPase involved in chromosome parti | 91.02 | |
| PRK02261 | 137 | methylaspartate mutase subunit S; Provisional | 91.0 | |
| TIGR00087 | 244 | surE 5'/3'-nucleotidase SurE. E. coli SurE is Reco | 90.57 | |
| cd03788 | 460 | GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a | 90.44 | |
| COG4370 | 412 | Uncharacterized protein conserved in bacteria [Fun | 90.26 | |
| COG2894 | 272 | MinD Septum formation inhibitor-activating ATPase | 89.87 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 89.35 | |
| PF02374 | 305 | ArsA_ATPase: Anion-transporting ATPase; PDB: 2WOO_ | 89.08 | |
| PRK13935 | 253 | stationary phase survival protein SurE; Provisiona | 88.94 | |
| PRK13933 | 253 | stationary phase survival protein SurE; Provisiona | 88.46 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 88.32 | |
| KOG1111 | 426 | consensus N-acetylglucosaminyltransferase complex, | 88.05 | |
| PF07429 | 360 | Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc | 87.88 | |
| PRK13934 | 266 | stationary phase survival protein SurE; Provisiona | 87.87 | |
| PRK02797 | 322 | 4-alpha-L-fucosyltransferase; Provisional | 87.74 | |
| PF02951 | 119 | GSH-S_N: Prokaryotic glutathione synthetase, N-ter | 87.51 | |
| TIGR02370 | 197 | pyl_corrinoid methyltransferase cognate corrinoid | 86.83 | |
| cd00561 | 159 | CobA_CobO_BtuR ATP:corrinoid adenosyltransferase B | 86.07 | |
| PRK06849 | 389 | hypothetical protein; Provisional | 85.91 | |
| PRK05986 | 191 | cob(I)alamin adenolsyltransferase/cobinamide ATP-d | 85.77 | |
| PF00448 | 196 | SRP54: SRP54-type protein, GTPase domain; InterPro | 85.57 | |
| PRK00346 | 250 | surE 5'(3')-nucleotidase/polyphosphatase; Provisio | 84.91 | |
| COG4088 | 261 | Predicted nucleotide kinase [Nucleotide transport | 84.66 | |
| PF09314 | 185 | DUF1972: Domain of unknown function (DUF1972); Int | 84.27 | |
| COG0541 | 451 | Ffh Signal recognition particle GTPase [Intracellu | 84.03 | |
| COG0552 | 340 | FtsY Signal recognition particle GTPase [Intracell | 83.72 | |
| PRK12342 | 254 | hypothetical protein; Provisional | 83.33 | |
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 83.11 | |
| PF05159 | 269 | Capsule_synth: Capsule polysaccharide biosynthesis | 83.01 | |
| PF04464 | 369 | Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate | 83.01 | |
| COG1703 | 323 | ArgK Putative periplasmic protein kinase ArgK and | 82.93 | |
| COG0496 | 252 | SurE Predicted acid phosphatase [General function | 82.91 | |
| PRK05632 | 684 | phosphate acetyltransferase; Reviewed | 82.79 | |
| COG4394 | 370 | Uncharacterized protein conserved in bacteria [Fun | 82.71 | |
| PF02441 | 129 | Flavoprotein: Flavoprotein; InterPro: IPR003382 Th | 82.54 | |
| PF07015 | 231 | VirC1: VirC1 protein; InterPro: IPR009744 This fam | 82.48 | |
| KOG0853 | 495 | consensus Glycosyltransferase [Cell wall/membrane/ | 82.14 | |
| PRK08305 | 196 | spoVFB dipicolinate synthase subunit B; Reviewed | 82.02 | |
| cd01425 | 193 | RPS2 Ribosomal protein S2 (RPS2), involved in form | 81.72 | |
| COG1484 | 254 | DnaC DNA replication protein [DNA replication, rec | 81.46 | |
| cd03793 | 590 | GT1_Glycogen_synthase_GSY2_like Glycogen synthase, | 81.33 | |
| KOG0780 | 483 | consensus Signal recognition particle, subunit Srp | 81.18 | |
| PRK13789 | 426 | phosphoribosylamine--glycine ligase; Provisional | 81.15 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 80.61 | |
| PRK05973 | 237 | replicative DNA helicase; Provisional | 80.36 | |
| PRK01077 | 451 | cobyrinic acid a,c-diamide synthase; Validated | 80.02 |
| >PLN02562 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-66 Score=504.31 Aligned_cols=436 Identities=32% Similarity=0.626 Sum_probs=340.2
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCCCCCCCcCCCCC
Q 012212 1 MSRQPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDGLELQAADRED 80 (468)
Q Consensus 1 m~~~~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 80 (468)
|..+.||+++|+|++||++|++.||+.|+.+|++|||++++.+...+.+.. ....+++|+.+|++.+.. ...+
T Consensus 3 ~~~~~HVVlvPfPaqGHi~PmL~LAk~Las~G~~VT~vtt~~~~~~~~~~~-----~~~~~i~~v~lp~g~~~~--~~~~ 75 (448)
T PLN02562 3 VTQRPKIILVPYPAQGHVTPMLKLASAFLSRGFEPVVITPEFIHRRISATL-----DPKLGITFMSISDGQDDD--PPRD 75 (448)
T ss_pred CCCCcEEEEEcCccccCHHHHHHHHHHHHhCCCEEEEEeCcchhhhhhhcc-----CCCCCEEEEECCCCCCCC--cccc
Confidence 445679999999999999999999999999999999999998877665431 111369999999876532 2234
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCcccHHHHHHHhCCceEEEcccchHHHHHHhhhhhHhhcCC
Q 012212 81 PLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVGSALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGI 160 (468)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~ 160 (468)
+..+...+...+.+.++++++.+... .++++||+|.+..|+..+|+.+|||++.++++++.......++|.....+.
T Consensus 76 ~~~l~~a~~~~~~~~l~~ll~~l~~~---~pv~cvI~D~~~~w~~~vA~~~giP~~~f~~~~a~~~~~~~~~~~~~~~~~ 152 (448)
T PLN02562 76 FFSIENSMENTMPPQLERLLHKLDED---GEVACMVVDLLASWAIGVADRCGVPVAGFWPVMLAAYRLIQAIPELVRTGL 152 (448)
T ss_pred HHHHHHHHHHhchHHHHHHHHHhcCC---CCcEEEEECCccHhHHHHHHHhCCCEEEEechhHHHHHHHHHHHHHhhccc
Confidence 44555555556778888888876532 245999999999999999999999999999998887777666655443332
Q ss_pred CCCCCcccccCCcccccCCCccCcccccCcCCCCCChhHHHHHHHHHHHHHhhccccEEEEcCcccCChhhh--------
Q 012212 161 IDPNGFAILNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPAC-------- 232 (468)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~~-------- 232 (468)
.+..+.+ .....+..+|+++.++.++++.. ..........+..+.+..+....++.+++||+.+||+...
T Consensus 153 ~~~~~~~-~~~~~~~~~Pg~~~l~~~dl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~ 230 (448)
T PLN02562 153 ISETGCP-RQLEKICVLPEQPLLSTEDLPWL-IGTPKARKARFKFWTRTLERTKSLRWILMNSFKDEEYDDVKNHQASYN 230 (448)
T ss_pred ccccccc-ccccccccCCCCCCCChhhCcch-hcCCCcchHHHHHHHHHHhccccCCEEEEcChhhhCHHHHHHHHhhhc
Confidence 2211111 11111235788877777777732 2221111223445555566677889999999999998532
Q ss_pred -ccCCCceeeccccCCCCCCCCCCCCCCCCCchhhhhhcccCccEEEEEecccc-cCCHHHHHHHHHHHHhCCCCEEEEE
Q 012212 233 -DLIPNILPIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVA-VLSQQQFAELALGLESLQKPFLWVI 310 (468)
Q Consensus 233 -~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~-~~~~~~~~~~~~a~~~~~~~~l~~~ 310 (468)
+..|+++.|||++............|..+.++.+||+++++++||||||||.. ..+.+++++++.+++.++.+|||++
T Consensus 231 ~~~~~~v~~iGpl~~~~~~~~~~~~~~~~~~~c~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~l~~~l~~~g~~fiW~~ 310 (448)
T PLN02562 231 NGQNPQILQIGPLHNQEATTITKPSFWEEDMSCLGWLQEQKPNSVIYISFGSWVSPIGESNVRTLALALEASGRPFIWVL 310 (448)
T ss_pred cccCCCEEEecCcccccccccCCCccccchHHHHHHHhcCCCCceEEEEecccccCCCHHHHHHHHHHHHHCCCCEEEEE
Confidence 23578999999987542111012223445567899999988889999999975 6799999999999999999999999
Q ss_pred cCCCCCCcccCCchhHHHHhCCCceEEcccChHHHhcCCCCCceeeccCchhHHHhhhcCCceeccccccchhhhHHHHH
Q 012212 311 RQDFMNGSRAKFPDGFIERVSNRGKIVEWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYIC 390 (468)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~ 390 (468)
... ....+|+++.++.++|+++++|+||.+||+|+++++||||||+||++||+++|||+|++|+++||+.||++++
T Consensus 311 ~~~----~~~~l~~~~~~~~~~~~~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~ 386 (448)
T PLN02562 311 NPV----WREGLPPGYVERVSKQGKVVSWAPQLEVLKHQAVGCYLTHCGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIV 386 (448)
T ss_pred cCC----chhhCCHHHHHHhccCEEEEecCCHHHHhCCCccceEEecCcchhHHHHHHcCCCEEeCCcccchHHHHHHHH
Confidence 753 2235888999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHhhceeEeeccCCCccCHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHH
Q 012212 391 EAWKIGLQFFADENGIITRQEIQRKVLTLLKNDDIRSNSLKLKEVARKSLLGGGSSFRNFESFISDIK 458 (468)
Q Consensus 391 ~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 458 (468)
+.+|+|+.++ + ++.++|+++|+++|+|++||+||++++++++++ .+||||.+++++||++++
T Consensus 387 ~~~g~g~~~~--~---~~~~~l~~~v~~~l~~~~~r~~a~~l~~~~~~~-~~gGSS~~nl~~~v~~~~ 448 (448)
T PLN02562 387 DVWKIGVRIS--G---FGQKEVEEGLRKVMEDSGMGERLMKLRERAMGE-EARLRSMMNFTTLKDELK 448 (448)
T ss_pred HHhCceeEeC--C---CCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhc-CCCCCHHHHHHHHHHHhC
Confidence 6469998884 4 899999999999999999999999999999987 667999999999999863
|
|
| >PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-64 Score=485.98 Aligned_cols=434 Identities=28% Similarity=0.502 Sum_probs=334.3
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCCCCCCCcCCCCCHH
Q 012212 3 RQPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDGLELQAADREDPL 82 (468)
Q Consensus 3 ~~~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 82 (468)
++.||+++|++++||++|++.||+.|+.||+.|||++++.+... . . ....+++|..+|+++++.........
T Consensus 6 ~~~HVvlvPfpaqGHi~P~l~LAk~La~~G~~VT~v~T~~n~~~--~-~-----~~~~~i~~~~ip~glp~~~~~~~~~~ 77 (451)
T PLN02410 6 ARRRVVLVPVPAQGHISPMMQLAKTLHLKGFSITIAQTKFNYFS--P-S-----DDFTDFQFVTIPESLPESDFKNLGPI 77 (451)
T ss_pred CCCEEEEECCCccccHHHHHHHHHHHHcCCCEEEEEeCcccccc--c-c-----cCCCCeEEEeCCCCCCcccccccCHH
Confidence 35799999999999999999999999999999999999976421 1 0 11136999999988765321112234
Q ss_pred HHHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCcccHHHHHHHhCCceEEEcccchHHHHHHhhhhhHhhcCC-C
Q 012212 83 KLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVGSALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGI-I 161 (468)
Q Consensus 83 ~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~-~ 161 (468)
.++..+...+.+.++++++.+.... ..++++||+|.+..|+..+|+.+|||.+.++++++.......+++.....+. .
T Consensus 78 ~~~~~~~~~~~~~~~~~L~~l~~~~-~~p~~cVI~D~f~~Wa~dvA~~lgIP~v~F~t~~a~~~~~~~~~~~~~~~~~~~ 156 (451)
T PLN02410 78 EFLHKLNKECQVSFKDCLGQLVLQQ-GNEIACVVYDEFMYFAEAAAKEFKLPNVIFSTTSATAFVCRSVFDKLYANNVLA 156 (451)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHhcc-CCCcEEEEECCcchHHHHHHHHcCCCEEEEEccCHHHHHHHHHHHHHHhccCCC
Confidence 5555555566777888887764211 1457999999999999999999999999999999988776665544443221 1
Q ss_pred CCCCcccccCCcccccCCCccCcccccCcCCCCCChhHHHHHHHHHHHHHhhccccEEEEcCcccCChhhhccC-----C
Q 012212 162 DPNGFAILNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACDLI-----P 236 (468)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~~~~~-----p 236 (468)
+... ........+|+++.++..+++ .+..... ......+.. ......++.+++||+.+||....+.. +
T Consensus 157 ~~~~---~~~~~~~~iPg~~~~~~~dlp-~~~~~~~--~~~~~~~~~-~~~~~~~~~vlvNTf~eLE~~~~~~l~~~~~~ 229 (451)
T PLN02410 157 PLKE---PKGQQNELVPEFHPLRCKDFP-VSHWASL--ESIMELYRN-TVDKRTASSVIINTASCLESSSLSRLQQQLQI 229 (451)
T ss_pred Cccc---cccCccccCCCCCCCChHHCc-chhcCCc--HHHHHHHHH-HhhcccCCEEEEeChHHhhHHHHHHHHhccCC
Confidence 1000 001112257777766666666 2221111 112222222 22356889999999999998755433 5
Q ss_pred CceeeccccCCCCCCCCCCCCCCCCCchhhhhhcccCccEEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCC
Q 012212 237 NILPIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALGLESLQKPFLWVIRQDFMN 316 (468)
Q Consensus 237 ~v~~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~l~~~~~~~~~ 316 (468)
++++|||++...... ...+..+.++.+||+++++++||||+|||....+.+++++++.+|+..+.+|+|++......
T Consensus 230 ~v~~vGpl~~~~~~~---~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gLe~s~~~FlWv~r~~~~~ 306 (451)
T PLN02410 230 PVYPIGPLHLVASAP---TSLLEENKSCIEWLNKQKKNSVIFVSLGSLALMEINEVMETASGLDSSNQQFLWVIRPGSVR 306 (451)
T ss_pred CEEEecccccccCCC---ccccccchHHHHHHHhCCCCcEEEEEccccccCCHHHHHHHHHHHHhcCCCeEEEEccCccc
Confidence 899999998643211 11123345688999999888999999999999999999999999999999999999843111
Q ss_pred --CcccCCchhHHHHhCCCceEEcccChHHHhcCCCCCceeeccCchhHHHhhhcCCceeccccccchhhhHHHHHHHhh
Q 012212 317 --GSRAKFPDGFIERVSNRGKIVEWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWK 394 (468)
Q Consensus 317 --~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG 394 (468)
+....+|++|.|++++|+++++|+||.+||+|+++++||||||+||++||+++|||||++|+++||+.||+++++.||
T Consensus 307 ~~~~~~~lp~~f~er~~~~g~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~ 386 (451)
T PLN02410 307 GSEWIESLPKEFSKIISGRGYIVKWAPQKEVLSHPAVGGFWSHCGWNSTLESIGEGVPMICKPFSSDQKVNARYLECVWK 386 (451)
T ss_pred ccchhhcCChhHHHhccCCeEEEccCCHHHHhCCCccCeeeecCchhHHHHHHHcCCCEEeccccccCHHHHHHHHHHhC
Confidence 112248999999999999999999999999999999999999999999999999999999999999999999987569
Q ss_pred ceeEeeccCCCccCHHHHHHHHHHHhcCh---HHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHh
Q 012212 395 IGLQFFADENGIITRQEIQRKVLTLLKND---DIRSNSLKLKEVARKSLLGGGSSFRNFESFISDIKM 459 (468)
Q Consensus 395 ~g~~l~~~~~~~~t~~~l~~ai~~~l~~~---~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 459 (468)
+|+.+. .. ++.++|+++|+++|.|+ +||++|++|++++++++.+||||.+++++||+.++.
T Consensus 387 ~G~~~~-~~---~~~~~v~~av~~lm~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~fv~~~~~ 450 (451)
T PLN02410 387 IGIQVE-GD---LDRGAVERAVKRLMVEEEGEEMRKRAISLKEQLRASVISGGSSHNSLEEFVHFMRT 450 (451)
T ss_pred eeEEeC-Cc---ccHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHh
Confidence 999997 34 99999999999999875 699999999999999999999999999999998864
|
|
| >PLN02173 UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-63 Score=482.49 Aligned_cols=427 Identities=30% Similarity=0.574 Sum_probs=333.4
Q ss_pred CCC-CCEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCCCCCCCc-CCC
Q 012212 1 MSR-QPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDGLELQA-ADR 78 (468)
Q Consensus 1 m~~-~~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~ 78 (468)
|.+ +.||+++|++++||++|++.||+.|+.+|+.|||++++.+...+... ...+++|+.+|++++... ...
T Consensus 1 ~~~~~~hvv~~P~paqGHi~P~l~lAk~La~~G~~vT~v~t~~~~~~~~~~-------~~~~i~~~~ipdglp~~~~~~~ 73 (449)
T PLN02173 1 MEKMRGHVLAVPFPSQGHITPIRQFCKRLHSKGFKTTHTLTTFIFNTIHLD-------PSSPISIATISDGYDQGGFSSA 73 (449)
T ss_pred CCCCCcEEEEecCcccccHHHHHHHHHHHHcCCCEEEEEECCchhhhcccC-------CCCCEEEEEcCCCCCCcccccc
Confidence 544 46999999999999999999999999999999999999876554321 114599999998877631 122
Q ss_pred CCHHHHHHHHHHHhhHHHHHHHHHHhhCCCCCCc-eEEEecCCcccHHHHHHHhCCceEEEcccchHHHHHHhhhhhHhh
Q 012212 79 EDPLKLGESVARAMRGCLRDLIEKINQSNDCEPI-RCVIADVTVGSALEVAESMGIARAAVVPFGPGSLALSLQFPKLLE 157 (468)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~p-Dlvi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~ 157 (468)
.+...++..+...+.+.++++++.+... .+| |+||+|.+..|+..+|+.+|||.+.+++++++......+ +.. .
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~Pv~cvV~D~f~~Wa~dVA~elgIP~v~F~~~~a~~~~~~~~-~~~-~ 148 (449)
T PLN02173 74 GSVPEYLQNFKTFGSKTVADIIRKHQST---DNPITCIVYDSFMPWALDLAREFGLAAAPFFTQSCAVNYINYL-SYI-N 148 (449)
T ss_pred cCHHHHHHHHHHhhhHHHHHHHHHhhcc---CCCceEEEECCcchhHHHHHHHhCCCEEEEechHHHHHHHHHh-HHh-c
Confidence 3455666666667788889988876432 245 999999999999999999999999999988776644332 111 1
Q ss_pred cCCCCCCCcccccCCcccccCCCccCcccccCcCCCCCChhHHHHHHHHHHHHHhhccccEEEEcCcccCChhhhccC--
Q 012212 158 AGIIDPNGFAILNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACDLI-- 235 (468)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~~~~~-- 235 (468)
.+ .....+|+++.++..+++ .++............+.+..+...+++.+++||+.+||....+..
T Consensus 149 ~~------------~~~~~~pg~p~l~~~dlp-~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~ 215 (449)
T PLN02173 149 NG------------SLTLPIKDLPLLELQDLP-TFVTPTGSHLAYFEMVLQQFTNFDKADFVLVNSFHDLDLHENELLSK 215 (449)
T ss_pred cC------------CccCCCCCCCCCChhhCC-hhhcCCCCchHHHHHHHHHHhhhccCCEEEEeCHHHhhHHHHHHHHh
Confidence 00 011236777777777777 323221111223344445556677899999999999998755444
Q ss_pred -CCceeeccccCCCC----CCCCC---CCCC--CCCCchhhhhhcccCccEEEEEecccccCCHHHHHHHHHHHHhCCCC
Q 012212 236 -PNILPIGPLLASNH----SGDLD---GNFW--SEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALGLESLQKP 305 (468)
Q Consensus 236 -p~v~~vGpl~~~~~----~~~~~---~~~~--~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~a~~~~~~~ 305 (468)
++++.|||+++... ..... ...| ..++++.+||+.+++++||||||||....+.+++.+++.++ .+.+
T Consensus 216 ~~~v~~VGPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~WLd~~~~~svvyvsfGS~~~~~~~~~~ela~gL--s~~~ 293 (449)
T PLN02173 216 VCPVLTIGPTVPSMYLDQQIKSDNDYDLNLFDLKEAALCTDWLDKRPQGSVVYIAFGSMAKLSSEQMEEIASAI--SNFS 293 (449)
T ss_pred cCCeeEEcccCchhhccccccccccccccccccccchHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHh--cCCC
Confidence 47999999974311 00000 1122 23456999999999899999999999889999999999999 5778
Q ss_pred EEEEEcCCCCCCcccCCchhHHHHh-CCCceEEcccChHHHhcCCCCCceeeccCchhHHHhhhcCCceeccccccchhh
Q 012212 306 FLWVIRQDFMNGSRAKFPDGFIERV-SNRGKIVEWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQ 384 (468)
Q Consensus 306 ~l~~~~~~~~~~~~~~~~~~~~~~~-~~nv~~~~~~p~~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~~~DQ~~ 384 (468)
|+|++... ....+|+++.+++ ++|+++++|+||.+||+|+++++||||||+||++||+++|||||++|+++||+.
T Consensus 294 flWvvr~~----~~~~lp~~~~~~~~~~~~~i~~W~PQ~~iL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ~~ 369 (449)
T PLN02173 294 YLWVVRAS----EESKLPPGFLETVDKDKSLVLKWSPQLQVLSNKAIGCFMTHCGWNSTMEGLSLGVPMVAMPQWTDQPM 369 (449)
T ss_pred EEEEEecc----chhcccchHHHhhcCCceEEeCCCCHHHHhCCCccceEEecCccchHHHHHHcCCCEEecCchhcchH
Confidence 99999753 2235888998887 688999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHhhceeEeeccC-CCccCHHHHHHHHHHHhcCh---HHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHH
Q 012212 385 NRNYICEAWKIGLQFFADE-NGIITRQEIQRKVLTLLKND---DIRSNSLKLKEVARKSLLGGGSSFRNFESFISDIK 458 (468)
Q Consensus 385 na~rv~~~lG~g~~l~~~~-~~~~t~~~l~~ai~~~l~~~---~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 458 (468)
||+++++.||+|+.+..++ ++.++.++|+++|+++|.|+ ++|+||++++++.++++.+||||.+++++|++++.
T Consensus 370 Na~~v~~~~g~Gv~v~~~~~~~~~~~e~v~~av~~vm~~~~~~~~r~~a~~~~~~a~~Av~~gGSS~~~l~~~v~~~~ 447 (449)
T PLN02173 370 NAKYIQDVWKVGVRVKAEKESGIAKREEIEFSIKEVMEGEKSKEMKENAGKWRDLAVKSLSEGGSTDININTFVSKIQ 447 (449)
T ss_pred HHHHHHHHhCceEEEeecccCCcccHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHhc
Confidence 9999997679999997543 34579999999999999774 48999999999999999999999999999999875
|
|
| >PLN02555 limonoid glucosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-63 Score=484.70 Aligned_cols=448 Identities=30% Similarity=0.529 Sum_probs=342.2
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhh--hh--ccCCCCCeEEEEcCCCCCCCcCCCC
Q 012212 4 QPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQ--EK--AEDSSSQIKLVTIPDGLELQAADRE 79 (468)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~--~~--~~~~~~~i~~~~~~~~~~~~~~~~~ 79 (468)
..||+++|+|++||++|++.||+.|+.+|..|||++++.+...+.+... .. .......+.|..+|++++.......
T Consensus 7 ~~HVv~~PfpaqGHi~Pml~lA~~La~~G~~vT~v~T~~~~~~~~~a~~~~~~~~~~~~~~~i~~~~~pdglp~~~~~~~ 86 (480)
T PLN02555 7 LVHVMLVSFPGQGHVNPLLRLGKLLASKGLLVTFVTTESWGKKMRQANKIQDGVLKPVGDGFIRFEFFEDGWAEDDPRRQ 86 (480)
T ss_pred CCEEEEECCcccccHHHHHHHHHHHHhCCCeEEEEeccchhhhhhccccccccccccCCCCeEEEeeCCCCCCCCccccc
Confidence 5899999999999999999999999999999999999987766542110 00 0001123677777777654321222
Q ss_pred CHHHHHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCcccHHHHHHHhCCceEEEcccchHHHHHHhhhhhHhhcC
Q 012212 80 DPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVGSALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAG 159 (468)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~ 159 (468)
++..++..+...+.+.++++++.+.... .++++||+|.+..|+..+|+.+|||.++++++++.......+++ .+
T Consensus 87 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~--~pv~ciV~D~~~~wa~~vA~~~gIP~~~F~t~~a~~~~~~~~~~----~~ 160 (480)
T PLN02555 87 DLDLYLPQLELVGKREIPNLVKRYAEQG--RPVSCLINNPFIPWVCDVAEELGIPSAVLWVQSCACFSAYYHYY----HG 160 (480)
T ss_pred CHHHHHHHHHHhhhHHHHHHHHHHhccC--CCceEEEECCcchHHHHHHHHcCCCeEEeecccHHHHHHHHHHh----hc
Confidence 4444555555567778888888764322 23499999999999999999999999999999998888776653 12
Q ss_pred CCCCCCcccccCCcccccCCCccCcccccCcCCCCCChhHHHHHHHHHHHHHhhccccEEEEcCcccCChhhhccC---C
Q 012212 160 IIDPNGFAILNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACDLI---P 236 (468)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~~~~~---p 236 (468)
..+..... .. .....+|+++.++..+++ .+.............+.+..+...+++.+++||+.+||....... .
T Consensus 161 ~~~~~~~~-~~-~~~~~iPglp~l~~~dlp-~~~~~~~~~~~~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~~~~l~~~~ 237 (480)
T PLN02555 161 LVPFPTET-EP-EIDVQLPCMPLLKYDEIP-SFLHPSSPYPFLRRAILGQYKNLDKPFCILIDTFQELEKEIIDYMSKLC 237 (480)
T ss_pred CCCccccc-CC-CceeecCCCCCcCHhhCc-ccccCCCCchHHHHHHHHHHHhcccCCEEEEEchHHHhHHHHHHHhhCC
Confidence 11100000 01 112357888878888887 333221112234444555556677899999999999998755433 1
Q ss_pred CceeeccccCCCCCC-CC-CCCCCCCCCchhhhhhcccCccEEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEcCCC
Q 012212 237 NILPIGPLLASNHSG-DL-DGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALGLESLQKPFLWVIRQDF 314 (468)
Q Consensus 237 ~v~~vGpl~~~~~~~-~~-~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~l~~~~~~~ 314 (468)
.++.|||+....... .. ....|..+.++.+||+.+++++||||+|||....+.+++.+++.+++..+.+|||++....
T Consensus 238 ~v~~iGPl~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~~l~~~~~~flW~~~~~~ 317 (480)
T PLN02555 238 PIKPVGPLFKMAKTPNSDVKGDISKPADDCIEWLDSKPPSSVVYISFGTVVYLKQEQIDEIAYGVLNSGVSFLWVMRPPH 317 (480)
T ss_pred CEEEeCcccCccccccccccccccccchhHHHHHhCCCCCceeEEEeccccCCCHHHHHHHHHHHHhcCCeEEEEEecCc
Confidence 389999997642211 11 0222445678999999998888999999999889999999999999999999999987431
Q ss_pred CC--CcccCCchhHHHHhCCCceEEcccChHHHhcCCCCCceeeccCchhHHHhhhcCCceeccccccchhhhHHHHHHH
Q 012212 315 MN--GSRAKFPDGFIERVSNRGKIVEWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEA 392 (468)
Q Consensus 315 ~~--~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~ 392 (468)
.. .....+|+++.++.++|+++++|+||.+||.|+++++||||||+||++||+++|||||++|+++||+.||+++++.
T Consensus 318 ~~~~~~~~~lp~~~~~~~~~~g~v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~ 397 (480)
T PLN02555 318 KDSGVEPHVLPEEFLEKAGDKGKIVQWCPQEKVLAHPSVACFVTHCGWNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDV 397 (480)
T ss_pred ccccchhhcCChhhhhhcCCceEEEecCCHHHHhCCCccCeEEecCCcchHHHHHHcCCCEEeCCCccccHHHHHHHHHH
Confidence 11 1123578899888999999999999999999999999999999999999999999999999999999999998886
Q ss_pred hhceeEeecc--CCCccCHHHHHHHHHHHhcCh---HHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhh
Q 012212 393 WKIGLQFFAD--ENGIITRQEIQRKVLTLLKND---DIRSNSLKLKEVARKSLLGGGSSFRNFESFISDIKML 460 (468)
Q Consensus 393 lG~g~~l~~~--~~~~~t~~~l~~ai~~~l~~~---~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 460 (468)
||+|+.+... ..+.++.++|.++|+++|.++ ++|+||++|+++.++++.+||||.+++++||+++.+.
T Consensus 398 ~gvGv~l~~~~~~~~~v~~~~v~~~v~~vm~~~~g~~~r~ra~~l~~~a~~A~~egGSS~~~l~~~v~~i~~~ 470 (480)
T PLN02555 398 FKTGVRLCRGEAENKLITREEVAECLLEATVGEKAAELKQNALKWKEEAEAAVAEGGSSDRNFQEFVDKLVRK 470 (480)
T ss_pred hCceEEccCCccccCcCcHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhc
Confidence 7999999531 123489999999999999764 4999999999999999999999999999999999865
|
|
| >PLN02207 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-63 Score=482.05 Aligned_cols=444 Identities=23% Similarity=0.416 Sum_probs=330.9
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHHCC--CEEEEEECCcchH-HHHHhhhhhccCCCCCeEEEEcCCCCCCCc-CCC
Q 012212 3 RQPHVLVIPYPAQGHVAPLMKLATKIAERA--IKVTVVNTQFIHK-KIIASLQEKAEDSSSQIKLVTIPDGLELQA-ADR 78 (468)
Q Consensus 3 ~~~~Il~~~~~~~GH~~p~~~LA~~L~~rG--H~Vt~~~~~~~~~-~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~ 78 (468)
++.||+|+|++++||++|++.||+.|+.+| ..|||++++.+.. .+...... ......+++|..+|+...... ...
T Consensus 2 ~~~hvv~~P~p~qGHi~P~l~lA~~La~~gg~~~vT~~~t~~~~~~~~~~~~~~-~~~~~~~i~~~~lp~~~~~~~~~~~ 80 (468)
T PLN02207 2 RNAELIFIPTPTVGHLVPFLEFARRLIEQDDRIRITILLMKLQGQSHLDTYVKS-IASSQPFVRFIDVPELEEKPTLGGT 80 (468)
T ss_pred CCcEEEEeCCcchhhHHHHHHHHHHHHhCCCCeEEEEEEcCCCcchhhHHhhhh-ccCCCCCeEEEEeCCCCCCCccccc
Confidence 457999999999999999999999999998 9999999998652 22221110 001113699999996432111 012
Q ss_pred CCHHHHHHHHHHHhhH----HHHHHHHHHhhCCCCCCceEEEecCCcccHHHHHHHhCCceEEEcccchHHHHHHhhhhh
Q 012212 79 EDPLKLGESVARAMRG----CLRDLIEKINQSNDCEPIRCVIADVTVGSALEVAESMGIARAAVVPFGPGSLALSLQFPK 154 (468)
Q Consensus 79 ~~~~~~~~~~~~~~~~----~~~~ll~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~ 154 (468)
.+....+..+...+.+ .+.++++...... .++++||+|.+..|+..+|+.+|||.+.++++++.......++|.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~pv~cvV~D~~~~w~~~vA~~~gip~~~f~~~~a~~~~~~~~~~~ 158 (468)
T PLN02207 81 QSVEAYVYDVIEKNIPLVRNIVMDILSSLALDG--VKVKGFVADFFCLPMIDVAKDVSLPFYVFLTTNSGFLAMMQYLAD 158 (468)
T ss_pred cCHHHHHHHHHHhcchhHHHHHHHHHHHhccCC--CCeEEEEECCcchHHHHHHHHhCCCEEEEECccHHHHHHHHHhhh
Confidence 2344344334444533 3444444321111 234999999999999999999999999999999988777766553
Q ss_pred HhhcCCCCCCCcccccCCcccccCCC-ccCcccccCcCCCCCChhHHHHHHHHHHHHHhhccccEEEEcCcccCChhhh-
Q 012212 155 LLEAGIIDPNGFAILNDGLISLSDEI-PAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPAC- 232 (468)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~~- 232 (468)
....... ...+ .. +....+|++ +.+...+++. +...... +..+.+......+++.+++||+++||.+..
T Consensus 159 ~~~~~~~--~~~~-~~-~~~~~vPgl~~~l~~~dlp~-~~~~~~~----~~~~~~~~~~~~~~~~vlvNtf~~LE~~~~~ 229 (468)
T PLN02207 159 RHSKDTS--VFVR-NS-EEMLSIPGFVNPVPANVLPS-ALFVEDG----YDAYVKLAILFTKANGILVNSSFDIEPYSVN 229 (468)
T ss_pred ccccccc--cCcC-CC-CCeEECCCCCCCCChHHCcc-hhcCCcc----HHHHHHHHHhcccCCEEEEEchHHHhHHHHH
Confidence 3211000 0000 11 122357887 5677777773 3322211 233445555677899999999999998732
Q ss_pred -----ccCCCceeeccccCCCCCCCCCCCCCCCCCchhhhhhcccCccEEEEEecccccCCHHHHHHHHHHHHhCCCCEE
Q 012212 233 -----DLIPNILPIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALGLESLQKPFL 307 (468)
Q Consensus 233 -----~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~l 307 (468)
+..|+++.|||++........ ...+..++++.+||+++++++||||||||....+.+++++++.+|+.++++|+
T Consensus 230 ~~~~~~~~p~v~~VGPl~~~~~~~~~-~~~~~~~~~~~~WLd~~~~~sVVyvSfGS~~~~~~~q~~ela~~l~~~~~~fl 308 (468)
T PLN02207 230 HFLDEQNYPSVYAVGPIFDLKAQPHP-EQDLARRDELMKWLDDQPEASVVFLCFGSMGRLRGPLVKEIAHGLELCQYRFL 308 (468)
T ss_pred HHHhccCCCcEEEecCCcccccCCCC-ccccchhhHHHHHHhcCCCCcEEEEEeccCcCCCHHHHHHHHHHHHHCCCcEE
Confidence 345789999999864321110 00112346799999999888999999999999999999999999999999999
Q ss_pred EEEcCCCCCCcccCCchhHHHHhCCCceEEcccChHHHhcCCCCCceeeccCchhHHHhhhcCCceeccccccchhhhHH
Q 012212 308 WVIRQDFMNGSRAKFPDGFIERVSNRGKIVEWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRN 387 (468)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~~~DQ~~na~ 387 (468)
|++..... +....+|+++++++++|+.+++|+||.+||+|+++++||||||+||++||+++|||||++|+++||+.||+
T Consensus 309 W~~r~~~~-~~~~~lp~~f~er~~~~g~i~~W~PQ~~IL~H~~vg~FvTH~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~ 387 (468)
T PLN02207 309 WSLRTEEV-TNDDLLPEGFLDRVSGRGMICGWSPQVEILAHKAVGGFVSHCGWNSIVESLWFGVPIVTWPMYAEQQLNAF 387 (468)
T ss_pred EEEeCCCc-cccccCCHHHHhhcCCCeEEEEeCCHHHHhcccccceeeecCccccHHHHHHcCCCEEecCccccchhhHH
Confidence 99985311 11234889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhceeEeecc----CCCccCHHHHHHHHHHHhc--ChHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhh
Q 012212 388 YICEAWKIGLQFFAD----ENGIITRQEIQRKVLTLLK--NDDIRSNSLKLKEVARKSLLGGGSSFRNFESFISDIKML 460 (468)
Q Consensus 388 rv~~~lG~g~~l~~~----~~~~~t~~~l~~ai~~~l~--~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 460 (468)
++++.+|+|+.+..+ .++.++.++|+++|+++|+ +++||+||++|++++++++.+||||.+++++|+++++..
T Consensus 388 ~~~~~~gvGv~~~~~~~~~~~~~v~~e~i~~av~~vm~~~~~~~r~~a~~l~~~a~~A~~~GGSS~~~l~~~v~~~~~~ 466 (468)
T PLN02207 388 LMVKELKLAVELKLDYRVHSDEIVNANEIETAIRCVMNKDNNVVRKRVMDISQMIQRATKNGGSSFAAIEKFIHDVIGI 466 (468)
T ss_pred HHHHHhCceEEEecccccccCCcccHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhc
Confidence 876646999987421 1234699999999999997 678999999999999999999999999999999998753
|
|
| >PLN02210 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-63 Score=482.53 Aligned_cols=431 Identities=28% Similarity=0.502 Sum_probs=327.6
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHH--HHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCCCCCCCcCCCCC
Q 012212 3 RQPHVLVIPYPAQGHVAPLMKLATK--IAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDGLELQAADRED 80 (468)
Q Consensus 3 ~~~~Il~~~~~~~GH~~p~~~LA~~--L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 80 (468)
...||+|+|+|++||++|++.||+. |++||++|||++++.+...+...+ .....+++..+++++++.. ..+
T Consensus 7 ~~~hvv~~P~pa~GHi~P~l~La~~L~L~~~G~~VT~v~t~~~~~~~~~~~-----~~~~~~~~~~~~~glp~~~--~~~ 79 (456)
T PLN02210 7 QETHVLMVTLAFQGHINPMLKLAKHLSLSSKNLHFTLATTEQARDLLSTVE-----KPRRPVDLVFFSDGLPKDD--PRA 79 (456)
T ss_pred CCCEEEEeCCcccccHHHHHHHHHHHHhhcCCcEEEEEeccchhhhhcccc-----CCCCceEEEECCCCCCCCc--ccC
Confidence 4579999999999999999999999 569999999999998877664322 1124578887887766542 234
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCcccHHHHHHHhCCceEEEcccchHHHHHHhhhhhHhhcCC
Q 012212 81 PLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVGSALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGI 160 (468)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~ 160 (468)
...++..+.+.+.+.++++++. .+||+||+|.+..|+..+|+.+|||.+.+++.++.......+++... +.
T Consensus 80 ~~~~~~~~~~~~~~~l~~~l~~-------~~~~~vI~D~~~~w~~~vA~~lgIP~~~f~~~sa~~~~~~~~~~~~~--~~ 150 (456)
T PLN02210 80 PETLLKSLNKVGAKNLSKIIEE-------KRYSCIISSPFTPWVPAVAAAHNIPCAILWIQACGAYSVYYRYYMKT--NS 150 (456)
T ss_pred HHHHHHHHHHhhhHHHHHHHhc-------CCCcEEEECCcchhHHHHHHHhCCCEEEEecccHHHHHHHHhhhhcc--CC
Confidence 4455555555555555655544 46999999999999999999999999999998888777665533211 11
Q ss_pred CCCCCcccccCCcccccCCCccCcccccCcCCCCCChhHHHHHHHHHHHHHhhccccEEEEcCcccCChhhhcc---CCC
Q 012212 161 IDPNGFAILNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACDL---IPN 237 (468)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~~~~---~p~ 237 (468)
.+.. ........+|+++.++..+++. ++..... ..+.....+..+....++.+++||+.++|....+. .++
T Consensus 151 ~~~~----~~~~~~~~~Pgl~~~~~~dl~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~~~~ 224 (456)
T PLN02210 151 FPDL----EDLNQTVELPALPLLEVRDLPS-FMLPSGG-AHFNNLMAEFADCLRYVKWVLVNSFYELESEIIESMADLKP 224 (456)
T ss_pred CCcc----cccCCeeeCCCCCCCChhhCCh-hhhcCCc-hHHHHHHHHHHHhcccCCEEEEeCHHHHhHHHHHHHhhcCC
Confidence 1100 0001123467777666677663 2222211 11112222333445678999999999999876554 357
Q ss_pred ceeeccccCCC---CCCC---C--CCCCCCCCCchhhhhhcccCccEEEEEecccccCCHHHHHHHHHHHHhCCCCEEEE
Q 012212 238 ILPIGPLLASN---HSGD---L--DGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALGLESLQKPFLWV 309 (468)
Q Consensus 238 v~~vGpl~~~~---~~~~---~--~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~l~~ 309 (468)
+++|||++... .... . ....|..+.++.+|++.+++++||||+|||....+.+++++++.+|+..+.+|+|+
T Consensus 225 v~~VGPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~e~a~~l~~~~~~flw~ 304 (456)
T PLN02210 225 VIPIGPLVSPFLLGDDEEETLDGKNLDMCKSDDCCMEWLDKQARSSVVYISFGSMLESLENQVETIAKALKNRGVPFLWV 304 (456)
T ss_pred EEEEcccCchhhcCcccccccccccccccccchHHHHHHhCCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEE
Confidence 99999997521 1110 0 01235566789999999888899999999998889999999999999999999999
Q ss_pred EcCCCCCCcccCCchhHHHHh-CCCceEEcccChHHHhcCCCCCceeeccCchhHHHhhhcCCceeccccccchhhhHHH
Q 012212 310 IRQDFMNGSRAKFPDGFIERV-SNRGKIVEWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNY 388 (468)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~-~~nv~~~~~~p~~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~~~DQ~~na~r 388 (468)
+.... ....+..+.++. ++|+.+++|+||.+||+|+++++||||||+||+.||+++|||||++|+++||+.||++
T Consensus 305 ~~~~~----~~~~~~~~~~~~~~~~g~v~~w~PQ~~iL~h~~vg~FitH~G~nS~~Eai~~GVP~v~~P~~~DQ~~na~~ 380 (456)
T PLN02210 305 IRPKE----KAQNVQVLQEMVKEGQGVVLEWSPQEKILSHMAISCFVTHCGWNSTIETVVAGVPVVAYPSWTDQPIDARL 380 (456)
T ss_pred EeCCc----cccchhhHHhhccCCCeEEEecCCHHHHhcCcCcCeEEeeCCcccHHHHHHcCCCEEecccccccHHHHHH
Confidence 97531 112334566666 4888888999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhceeEeeccC-CCccCHHHHHHHHHHHhcChH---HHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHh
Q 012212 389 ICEAWKIGLQFFADE-NGIITRQEIQRKVLTLLKNDD---IRSNSLKLKEVARKSLLGGGSSFRNFESFISDIKM 459 (468)
Q Consensus 389 v~~~lG~g~~l~~~~-~~~~t~~~l~~ai~~~l~~~~---~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 459 (468)
+++.||+|+.+...+ ++.++.++|+++|+++|.+++ +|+||++|++..++++.+||||.+++++||++++.
T Consensus 381 ~~~~~g~G~~l~~~~~~~~~~~~~l~~av~~~m~~~~g~~~r~~a~~l~~~a~~Av~~gGSS~~~l~~~v~~~~~ 455 (456)
T PLN02210 381 LVDVFGIGVRMRNDAVDGELKVEEVERCIEAVTEGPAAADIRRRAAELKHVARLALAPGGSSARNLDLFISDITI 455 (456)
T ss_pred HHHHhCeEEEEeccccCCcCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhc
Confidence 987469999997532 345999999999999998765 99999999999999999999999999999998863
|
|
| >PLN02152 indole-3-acetate beta-glucosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-63 Score=477.96 Aligned_cols=432 Identities=27% Similarity=0.501 Sum_probs=331.8
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHH-CCCEEEEEECCcc-hHHHHHhhhhhccCCCCCeEEEEcCCCCCCCcC-CCC
Q 012212 3 RQPHVLVIPYPAQGHVAPLMKLATKIAE-RAIKVTVVNTQFI-HKKIIASLQEKAEDSSSQIKLVTIPDGLELQAA-DRE 79 (468)
Q Consensus 3 ~~~~Il~~~~~~~GH~~p~~~LA~~L~~-rGH~Vt~~~~~~~-~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~ 79 (468)
++.||+++|+++.||++|++.||+.|+. +|+.|||++++.+ ...+.... ....+++|+.++++++.... ...
T Consensus 2 ~~~hvv~~P~p~qGHi~P~l~La~~La~~~G~~vT~v~t~~~~~~~~~~~~-----~~~~~i~~~~i~dglp~g~~~~~~ 76 (455)
T PLN02152 2 APPHFLLVTFPAQGHVNPSLRFARRLIKTTGTRVTFATCLSVIHRSMIPNH-----NNVENLSFLTFSDGFDDGVISNTD 76 (455)
T ss_pred CCcEEEEecCcccccHHHHHHHHHHHhhCCCcEEEEEeccchhhhhhhccC-----CCCCCEEEEEcCCCCCCccccccc
Confidence 4469999999999999999999999996 7999999999864 22211110 11136999999987765421 233
Q ss_pred CHHHHHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCcccHHHHHHHhCCceEEEcccchHHHHHHhhhhhHhhcC
Q 012212 80 DPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVGSALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAG 159 (468)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~ 159 (468)
+....+..+...+.+.++++++.+.... .++++||+|.+..|+..+|+.+|||.+.++++++......++++. +
T Consensus 77 ~~~~~~~~~~~~~~~~l~~~l~~l~~~~--~pv~ciV~D~~~~wa~dvA~~lgIP~~~f~t~~a~~~~~~~~~~~----~ 150 (455)
T PLN02152 77 DVQNRLVNFERNGDKALSDFIEANLNGD--SPVTCLIYTILPNWAPKVARRFHLPSVLLWIQPAFVFDIYYNYST----G 150 (455)
T ss_pred cHHHHHHHHHHhccHHHHHHHHHhhccC--CCceEEEECCccHhHHHHHHHhCCCEEEEECccHHHHHHHHHhhc----c
Confidence 4555566666677888888888764322 345999999999999999999999999999999988777665331 1
Q ss_pred CCCCCCcccccCCcccccCCCccCcccccCcCCCCCChhHHHHHHHHHHHHHhhc--cccEEEEcCcccCChhhhccC--
Q 012212 160 IIDPNGFAILNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVK--ISNWIINNSVYELDSPACDLI-- 235 (468)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~le~~~~~~~-- 235 (468)
. + ....+|+++.++..+++ .++............+.+..+... .++.+++||+.+||....+..
T Consensus 151 ~-~----------~~~~iPglp~l~~~dlp-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~ 218 (455)
T PLN02152 151 N-N----------SVFEFPNLPSLEIRDLP-SFLSPSNTNKAAQAVYQELMEFLKEESNPKILVNTFDSLEPEFLTAIPN 218 (455)
T ss_pred C-C----------CeeecCCCCCCchHHCc-hhhcCCCCchhHHHHHHHHHHHhhhccCCEEEEeChHHhhHHHHHhhhc
Confidence 0 0 01246777767777777 333221111122233334444333 347999999999998776655
Q ss_pred CCceeeccccCCCCC-CCCCC---CCCCCCCchhhhhhcccCccEEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEc
Q 012212 236 PNILPIGPLLASNHS-GDLDG---NFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALGLESLQKPFLWVIR 311 (468)
Q Consensus 236 p~v~~vGpl~~~~~~-~~~~~---~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~l~~~~ 311 (468)
..++.|||++..... ....+ ..+..+.++.+||+.+++++||||+|||...++.+++++++.+|+.++.+|+|++.
T Consensus 219 ~~v~~VGPL~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flWv~r 298 (455)
T PLN02152 219 IEMVAVGPLLPAEIFTGSESGKDLSVRDQSSSYTLWLDSKTESSVIYVSFGTMVELSKKQIEELARALIEGKRPFLWVIT 298 (455)
T ss_pred CCEEEEcccCccccccccccCccccccccchHHHHHhhCCCCCceEEEEecccccCCHHHHHHHHHHHHHcCCCeEEEEe
Confidence 369999999753210 00000 11333457999999998889999999999999999999999999999999999997
Q ss_pred CCCCC------Cc--ccCCchhHHHHhCCCceEEcccChHHHhcCCCCCceeeccCchhHHHhhhcCCceeccccccchh
Q 012212 312 QDFMN------GS--RAKFPDGFIERVSNRGKIVEWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQY 383 (468)
Q Consensus 312 ~~~~~------~~--~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~~~DQ~ 383 (468)
..... +. ...+++++.|+.++|+++++|+||.+||+|+++++||||||+||+.||+++|||+|++|+++||+
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~f~e~~~~~g~v~~W~PQ~~iL~h~~vg~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~ 378 (455)
T PLN02152 299 DKLNREAKIEGEEETEIEKIAGFRHELEEVGMIVSWCSQIEVLRHRAVGCFVTHCGWSSSLESLVLGVPVVAFPMWSDQP 378 (455)
T ss_pred cCcccccccccccccccccchhHHHhccCCeEEEeeCCHHHHhCCcccceEEeeCCcccHHHHHHcCCCEEeccccccch
Confidence 53110 00 11347889999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHhhceeEeeccCCCccCHHHHHHHHHHHhcChH--HHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHH
Q 012212 384 QNRNYICEAWKIGLQFFADENGIITRQEIQRKVLTLLKNDD--IRSNSLKLKEVARKSLLGGGSSFRNFESFISDI 457 (468)
Q Consensus 384 ~na~rv~~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~~~--~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 457 (468)
.||+++++.||+|+.+..++++..+.++|+++|+++|+|+. ||+||++|+++++++..+||||.+++++||+++
T Consensus 379 ~na~~~~~~~~~G~~~~~~~~~~~~~e~l~~av~~vm~~~~~~~r~~a~~~~~~~~~a~~~ggsS~~nl~~li~~i 454 (455)
T PLN02152 379 ANAKLLEEIWKTGVRVRENSEGLVERGEIRRCLEAVMEEKSVELRESAEKWKRLAIEAGGEGGSSDKNVEAFVKTL 454 (455)
T ss_pred HHHHHHHHHhCceEEeecCcCCcCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHh
Confidence 99999988568888886544345799999999999998765 899999999999999999999999999999876
|
|
| >PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-63 Score=481.42 Aligned_cols=445 Identities=25% Similarity=0.412 Sum_probs=326.3
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCC----CCCCCcCC-
Q 012212 3 RQPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPD----GLELQAAD- 77 (468)
Q Consensus 3 ~~~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~----~~~~~~~~- 77 (468)
++.||+++|+|++||++|++.||+.|+.+|+.|||++++.+...+.... .....+++..+|- +++.+...
T Consensus 8 ~~~HVvl~PfpaqGHi~P~l~LAk~La~~G~~VTfv~T~~n~~~~~~~~-----~~~~~i~~~~lp~P~~~~lPdG~~~~ 82 (477)
T PLN02863 8 AGTHVLVFPFPAQGHMIPLLDLTHRLALRGLTITVLVTPKNLPFLNPLL-----SKHPSIETLVLPFPSHPSIPSGVENV 82 (477)
T ss_pred CCCEEEEecCcccchHHHHHHHHHHHHhCCCEEEEEeCCCcHHHHhhhc-----ccCCCeeEEeCCCCCcCCCCCCCcCh
Confidence 4689999999999999999999999999999999999999887776532 1113577765441 22222111
Q ss_pred ---CCCHHHHHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCcccHHHHHHHhCCceEEEcccchHHHHHHhhhhh
Q 012212 78 ---REDPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVGSALEVAESMGIARAAVVPFGPGSLALSLQFPK 154 (468)
Q Consensus 78 ---~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~ 154 (468)
..+....+......+.+.+.++++.+ . .+|++||+|.+..|+..+|+.+|||++.+++++++....+.+++.
T Consensus 83 ~~~~~~~~~~~~~a~~~~~~~~~~~l~~~---~--~~p~cvI~D~f~~Wa~dVA~e~GIP~~~F~t~sA~~~~~~~~~~~ 157 (477)
T PLN02863 83 KDLPPSGFPLMIHALGELYAPLLSWFRSH---P--SPPVAIISDMFLGWTQNLACQLGIRRFVFSPSGAMALSIMYSLWR 157 (477)
T ss_pred hhcchhhHHHHHHHHHHhHHHHHHHHHhC---C--CCCeEEEEcCchHhHHHHHHHcCCCEEEEeccCHHHHHHHHHHhh
Confidence 11111222222333444455555442 2 467999999999999999999999999999999999888777543
Q ss_pred HhhcCCCCCCCcccccCCcccccCCCccCcccccCcCCCCCChhHHHHHHHHHHHHHhhccccEEEEcCcccCChhhhcc
Q 012212 155 LLEAGIIDPNGFAILNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACDL 234 (468)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~~~~ 234 (468)
..+..... .. . .....+..+|+++.++..+++. +.............+.+.......++.+++||+.+||....+.
T Consensus 158 ~~~~~~~~-~~-~-~~~~~~~~iPg~~~~~~~dlp~-~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~ 233 (477)
T PLN02863 158 EMPTKINP-DD-Q-NEILSFSKIPNCPKYPWWQISS-LYRSYVEGDPAWEFIKDSFRANIASWGLVVNSFTELEGIYLEH 233 (477)
T ss_pred cccccccc-cc-c-ccccccCCCCCCCCcChHhCch-hhhccCccchHHHHHHHHHhhhccCCEEEEecHHHHHHHHHHH
Confidence 21110000 00 0 0000122467777777777663 2211101112233333444445577889999999999876543
Q ss_pred C------CCceeeccccCCCCCCC---CC-CCCCCCCCchhhhhhcccCccEEEEEecccccCCHHHHHHHHHHHHhCCC
Q 012212 235 I------PNILPIGPLLASNHSGD---LD-GNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALGLESLQK 304 (468)
Q Consensus 235 ~------p~v~~vGpl~~~~~~~~---~~-~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~a~~~~~~ 304 (468)
. ++++.|||++....... .. ...+..++++.+||+.+++++||||||||....+.+++.+++.+|+..+.
T Consensus 234 ~~~~~~~~~v~~IGPL~~~~~~~~~~~~~~~~~~~~~~~~~~WLd~~~~~svVyvsfGS~~~~~~~~~~ela~gL~~~~~ 313 (477)
T PLN02863 234 LKKELGHDRVWAVGPILPLSGEKSGLMERGGPSSVSVDDVMTWLDTCEDHKVVYVCFGSQVVLTKEQMEALASGLEKSGV 313 (477)
T ss_pred HHhhcCCCCeEEeCCCcccccccccccccCCcccccHHHHHHHHhcCCCCceEEEEeeceecCCHHHHHHHHHHHHhCCC
Confidence 2 57999999975332110 00 11111346799999999888999999999988899999999999999999
Q ss_pred CEEEEEcCCCCC-CcccCCchhHHHHhCC-CceEEcccChHHHhcCCCCCceeeccCchhHHHhhhcCCceeccccccch
Q 012212 305 PFLWVIRQDFMN-GSRAKFPDGFIERVSN-RGKIVEWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQ 382 (468)
Q Consensus 305 ~~l~~~~~~~~~-~~~~~~~~~~~~~~~~-nv~~~~~~p~~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~~~DQ 382 (468)
+|+|+++..... .....+|+++.+++.+ ++++.+|+||.+||.|+++++||||||+||++||+++|||||++|+++||
T Consensus 314 ~flw~~~~~~~~~~~~~~lp~~~~~r~~~~g~~v~~w~PQ~~vL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ 393 (477)
T PLN02863 314 HFIWCVKEPVNEESDYSNIPSGFEDRVAGRGLVIRGWAPQVAILSHRAVGAFLTHCGWNSVLEGLVAGVPMLAWPMAADQ 393 (477)
T ss_pred cEEEEECCCcccccchhhCCHHHHHHhccCCEEecCCCCHHHHhcCCCcCeEEecCCchHHHHHHHcCCCEEeCCccccc
Confidence 999999743211 1123588899888744 55566999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHhhceeEeeccCCCccCHHHHHHHHHHHh-cChHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhhc
Q 012212 383 YQNRNYICEAWKIGLQFFADENGIITRQEIQRKVLTLL-KNDDIRSNSLKLKEVARKSLLGGGSSFRNFESFISDIKMLI 461 (468)
Q Consensus 383 ~~na~rv~~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l-~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 461 (468)
+.||+++++.||+|+.+...+.+..+.+++.++|+++| ++++||+||++++++.++++.+||||.+++++||+.+++..
T Consensus 394 ~~na~~v~~~~gvG~~~~~~~~~~~~~~~v~~~v~~~m~~~~~~r~~a~~l~e~a~~Av~~gGSS~~~l~~~v~~i~~~~ 473 (477)
T PLN02863 394 FVNASLLVDELKVAVRVCEGADTVPDSDELARVFMESVSENQVERERAKELRRAALDAIKERGSSVKDLDGFVKHVVELG 473 (477)
T ss_pred hhhHHHHHHhhceeEEeccCCCCCcCHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHhc
Confidence 99999976547999999653334578999999999998 67889999999999999999999999999999999998653
|
|
| >PLN02554 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-62 Score=482.51 Aligned_cols=443 Identities=25% Similarity=0.434 Sum_probs=329.6
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHHCC--CEEEEEECCcchHHHH--Hhhhhhcc-CCCCCeEEEEcCCCCCCCcCCC
Q 012212 4 QPHVLVIPYPAQGHVAPLMKLATKIAERA--IKVTVVNTQFIHKKII--ASLQEKAE-DSSSQIKLVTIPDGLELQAADR 78 (468)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~~~LA~~L~~rG--H~Vt~~~~~~~~~~i~--~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~ 78 (468)
++||+++|+++.||++|++.||+.|+.+| ..|||++++.+...+. ........ ....+++|+.+|.+..... ..
T Consensus 2 ~~hvvl~P~paqGHi~P~l~LAk~La~~G~~~~vT~v~t~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~~-~~ 80 (481)
T PLN02554 2 KIELVFIPSPGIGHLRPTVELAKLLVDSDDRLSITVIIIPSRSGDDASSSAYIASLSASSEDRLRYEVISAGDQPTT-ED 80 (481)
T ss_pred ceEEEEeCCcchhhHHHHHHHHHHHHhCCCCEEEEEEeCCCccchhhhhhhhhhhcccCCCCCeEEEEcCCCCCCcc-cc
Confidence 36999999999999999999999999998 8899999987754321 10000000 0123699999997764221 11
Q ss_pred CCHHHHHHHHHHHhhHHHHHHHHHHhhC-C-CCCCc-eEEEecCCcccHHHHHHHhCCceEEEcccchHHHHHHhhhhhH
Q 012212 79 EDPLKLGESVARAMRGCLRDLIEKINQS-N-DCEPI-RCVIADVTVGSALEVAESMGIARAAVVPFGPGSLALSLQFPKL 155 (468)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~ll~~l~~~-~-~~~~p-Dlvi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~ 155 (468)
..+.. +...+.+.+++.++++... . ...+| ++||+|.+..|+..+|+.+|||++.++++++.......++|..
T Consensus 81 ~~~~~----~~~~~~~~~~~~l~~l~~~~~~~~~~pv~cvV~D~f~~wa~dvA~~lgIP~~~F~t~sa~~~~~~~~~~~~ 156 (481)
T PLN02554 81 PTFQS----YIDNQKPKVRDAVAKLVDDSSTPSSPRLAGFVVDMFCTSMIDVANEFGVPSYMFYTSNATFLGLQLHVQML 156 (481)
T ss_pred hHHHH----HHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEECCcchhHHHHHHHhCCCEEEEeCCcHHHHHHHHhhhhh
Confidence 12222 2334444555555554321 0 00134 8999999999999999999999999999999998888776654
Q ss_pred hhcCCCCCCCcccccCCcccccCCCc-cCcccccCcCCCCCChhHHHHHHHHHHHHHhhccccEEEEcCcccCChhhhc-
Q 012212 156 LEAGIIDPNGFAILNDGLISLSDEIP-AWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACD- 233 (468)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~~~- 233 (468)
...+..+..+.+ .. .....+|+++ +++..+++ .+...+ .....+.+....+..++.+++||+.+||.....
T Consensus 157 ~~~~~~~~~~~~-~~-~~~v~iPgl~~pl~~~dlp-~~~~~~----~~~~~~~~~~~~~~~~~gvlvNt~~eLe~~~~~~ 229 (481)
T PLN02554 157 YDEKKYDVSELE-DS-EVELDVPSLTRPYPVKCLP-SVLLSK----EWLPLFLAQARRFREMKGILVNTVAELEPQALKF 229 (481)
T ss_pred ccccccCccccC-CC-CceeECCCCCCCCCHHHCC-CcccCH----HHHHHHHHHHHhcccCCEEEEechHHHhHHHHHH
Confidence 322111100011 11 0122477773 56666766 323221 223444455566778999999999999985432
Q ss_pred ------cCCCceeeccccC-CCCCCCCCCCCCCCCCchhhhhhcccCccEEEEEecccccCCHHHHHHHHHHHHhCCCCE
Q 012212 234 ------LIPNILPIGPLLA-SNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALGLESLQKPF 306 (468)
Q Consensus 234 ------~~p~v~~vGpl~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~ 306 (468)
..|+++.|||++. ..... ......+.++.+|++++++++||||+|||....+.+++++++.+++.++++|
T Consensus 230 l~~~~~~~~~v~~vGpl~~~~~~~~---~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~la~~l~~~~~~f 306 (481)
T PLN02554 230 FSGSSGDLPPVYPVGPVLHLENSGD---DSKDEKQSEILRWLDEQPPKSVVFLCFGSMGGFSEEQAREIAIALERSGHRF 306 (481)
T ss_pred HHhcccCCCCEEEeCCCcccccccc---ccccccchHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHHHHcCCCe
Confidence 3478999999943 22111 0001245689999999988889999999998889999999999999999999
Q ss_pred EEEEcCCCC----------CCcccCCchhHHHHhCCCceEEcccChHHHhcCCCCCceeeccCchhHHHhhhcCCceecc
Q 012212 307 LWVIRQDFM----------NGSRAKFPDGFIERVSNRGKIVEWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCW 376 (468)
Q Consensus 307 l~~~~~~~~----------~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~ 376 (468)
+|++..... .+....+|+++.+++++|+++++|+||.+||+|+++++||||||+||+.||+++|||||++
T Consensus 307 lW~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~r~~~~g~v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Ea~~~GVP~l~~ 386 (481)
T PLN02554 307 LWSLRRASPNIMKEPPGEFTNLEEILPEGFLDRTKDIGKVIGWAPQVAVLAKPAIGGFVTHCGWNSILESLWFGVPMAAW 386 (481)
T ss_pred EEEEcCCcccccccccccccchhhhCChHHHHHhccCceEEeeCCHHHHhCCcccCcccccCccchHHHHHHcCCCEEec
Confidence 999975210 0001126899999999999999999999999999999999999999999999999999999
Q ss_pred ccccchhhhHH-HHHHHhhceeEeecc--------CCCccCHHHHHHHHHHHhc-ChHHHHHHHHHHHHHHHHhcCCCch
Q 012212 377 PYFSDQYQNRN-YICEAWKIGLQFFAD--------ENGIITRQEIQRKVLTLLK-NDDIRSNSLKLKEVARKSLLGGGSS 446 (468)
Q Consensus 377 P~~~DQ~~na~-rv~~~lG~g~~l~~~--------~~~~~t~~~l~~ai~~~l~-~~~~r~~a~~l~~~~~~~~~~~g~~ 446 (468)
|+++||+.||+ ++++ +|+|+.++.. +++.++.++|+++|+++|+ |++||+||+++++++++++.+||||
T Consensus 387 P~~~DQ~~Na~~~v~~-~g~Gv~l~~~~~~~~~~~~~~~~~~e~l~~av~~vm~~~~~~r~~a~~l~~~~~~av~~gGss 465 (481)
T PLN02554 387 PLYAEQKFNAFEMVEE-LGLAVEIRKYWRGDLLAGEMETVTAEEIERGIRCLMEQDSDVRKRVKEMSEKCHVALMDGGSS 465 (481)
T ss_pred CccccchhhHHHHHHH-hCceEEeeccccccccccccCeEcHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCChH
Confidence 99999999995 5777 6999999741 1235899999999999996 7889999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcc
Q 012212 447 FRNFESFISDIKMLIS 462 (468)
Q Consensus 447 ~~~~~~~~~~~~~~~~ 462 (468)
.+++++||++++.+++
T Consensus 466 ~~~l~~lv~~~~~~~~ 481 (481)
T PLN02554 466 HTALKKFIQDVTKNIA 481 (481)
T ss_pred HHHHHHHHHHHHhhCC
Confidence 9999999999998764
|
|
| >PLN02992 coniferyl-alcohol glucosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-61 Score=470.34 Aligned_cols=429 Identities=26% Similarity=0.438 Sum_probs=328.1
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHH-HCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCC----CCCCCcCC
Q 012212 3 RQPHVLVIPYPAQGHVAPLMKLATKIA-ERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPD----GLELQAAD 77 (468)
Q Consensus 3 ~~~~Il~~~~~~~GH~~p~~~LA~~L~-~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~----~~~~~~~~ 77 (468)
.+.||+++|++++||++|++.||+.|+ .+|++|||++++.+...+.+... ...++++..+|. ++++..
T Consensus 4 ~~pHVvl~P~paqGHi~P~l~LAk~La~~~g~~vT~v~t~~n~~~~~~~~~-----~~~~i~~~~lp~p~~~glp~~~-- 76 (481)
T PLN02992 4 TKPHAAMFSSPGMGHVIPVIELGKRLSANHGFHVTVFVLETDAASAQSKFL-----NSTGVDIVGLPSPDISGLVDPS-- 76 (481)
T ss_pred CCcEEEEeCCcccchHHHHHHHHHHHHhCCCcEEEEEeCCCchhhhhhccc-----cCCCceEEECCCccccCCCCCC--
Confidence 457999999999999999999999998 78999999999988765543221 113588888884 332111
Q ss_pred CCCHHHHHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCcccHHHHHHHhCCceEEEcccchHHHHHHhhhhhHhh
Q 012212 78 REDPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVGSALEVAESMGIARAAVVPFGPGSLALSLQFPKLLE 157 (468)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~ 157 (468)
.+....+..+...+.+.++++++.+. .+|++||+|.+..|+..+|+.+|||++.++++++.......++|....
T Consensus 77 -~~~~~~~~~~~~~~~~~~~~~l~~~~-----~~p~cvV~D~f~~Wa~dVA~elgIP~v~F~t~sA~~~~~~~~~~~~~~ 150 (481)
T PLN02992 77 -AHVVTKIGVIMREAVPTLRSKIAEMH-----QKPTALIVDLFGTDALCLGGEFNMLTYIFIASNARFLGVSIYYPTLDK 150 (481)
T ss_pred -ccHHHHHHHHHHHhHHHHHHHHHhcC-----CCCeEEEECCcchhHHHHHHHcCCCEEEEecCcHHHHHHHHhhhhhcc
Confidence 12222333334455667777776642 468999999999999999999999999999999988776665553221
Q ss_pred cCCCCCCCcccccCCcccccCCCccCcccccCcCCCCCChhHHHHHHHHHHHHHhhccccEEEEcCcccCChhhhccC--
Q 012212 158 AGIIDPNGFAILNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACDLI-- 235 (468)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~~~~~-- 235 (468)
..... .. . ......+|+++.++..+++. .+..+.. ..+..+.+.......++.+++||+.+||....+..
T Consensus 151 ~~~~~---~~-~-~~~~~~iPg~~~l~~~dlp~-~~~~~~~--~~~~~~~~~~~~~~~a~gvlvNTf~eLE~~~l~~l~~ 222 (481)
T PLN02992 151 DIKEE---HT-V-QRKPLAMPGCEPVRFEDTLD-AYLVPDE--PVYRDFVRHGLAYPKADGILVNTWEEMEPKSLKSLQD 222 (481)
T ss_pred ccccc---cc-c-CCCCcccCCCCccCHHHhhH-hhcCCCc--HHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHhh
Confidence 10000 00 0 01123477777666666662 1212211 23344445555677899999999999998765532
Q ss_pred ---------CCceeeccccCCCCCCCCCCCCCCCCCchhhhhhcccCccEEEEEecccccCCHHHHHHHHHHHHhCCCCE
Q 012212 236 ---------PNILPIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALGLESLQKPF 306 (468)
Q Consensus 236 ---------p~v~~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~ 306 (468)
+.++.|||++...... ..+.++.+||+.+++++||||+|||...++.+++++++.+|+.++++|
T Consensus 223 ~~~~~~~~~~~v~~VGPl~~~~~~~-------~~~~~c~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~f 295 (481)
T PLN02992 223 PKLLGRVARVPVYPIGPLCRPIQSS-------KTDHPVLDWLNKQPNESVLYISFGSGGSLSAKQLTELAWGLEMSQQRF 295 (481)
T ss_pred ccccccccCCceEEecCccCCcCCC-------cchHHHHHHHHcCCCCceEEEeecccccCCHHHHHHHHHHHHHcCCCE
Confidence 4699999997642111 235569999999988899999999999999999999999999999999
Q ss_pred EEEEcCCCCC---------------C-cccCCchhHHHHhCCCceEE-cccChHHHhcCCCCCceeeccCchhHHHhhhc
Q 012212 307 LWVIRQDFMN---------------G-SRAKFPDGFIERVSNRGKIV-EWAPQEKVLGHSSVACFISHCGWNSTMEGLSM 369 (468)
Q Consensus 307 l~~~~~~~~~---------------~-~~~~~~~~~~~~~~~nv~~~-~~~p~~~ll~~~~~~~~I~hGG~~s~~eal~~ 369 (468)
+|++....+. + ....+|++|.|++.++..++ +|+||.+||+|+++++||||||+||+.||+++
T Consensus 296 lW~~r~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~f~eR~~~rg~vv~~W~PQ~~iL~h~~vg~FitH~G~nS~~Eal~~ 375 (481)
T PLN02992 296 VWVVRPPVDGSACSAYFSANGGETRDNTPEYLPEGFVSRTHDRGFVVPSWAPQAEILAHQAVGGFLTHCGWSSTLESVVG 375 (481)
T ss_pred EEEEeCCcccccccccccCcccccccchhhhCCHHHHHHhcCCCEEEeecCCHHHHhCCcccCeeEecCchhHHHHHHHc
Confidence 9999642110 0 12248899999987666555 99999999999999999999999999999999
Q ss_pred CCceeccccccchhhhHHHHH-HHhhceeEeeccCCCccCHHHHHHHHHHHhcCh---HHHHHHHHHHHHHHHHhc--CC
Q 012212 370 GVPFLCWPYFSDQYQNRNYIC-EAWKIGLQFFADENGIITRQEIQRKVLTLLKND---DIRSNSLKLKEVARKSLL--GG 443 (468)
Q Consensus 370 GvP~v~~P~~~DQ~~na~rv~-~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~~---~~r~~a~~l~~~~~~~~~--~~ 443 (468)
|||||++|+++||+.||++++ + +|+|+.++.. ++.++.++|+++|+++|.++ ++|++++++++++++++. +|
T Consensus 376 GVP~l~~P~~~DQ~~na~~~~~~-~g~gv~~~~~-~~~~~~~~l~~av~~vm~~~~g~~~r~~a~~~~~~a~~Av~~~~G 453 (481)
T PLN02992 376 GVPMIAWPLFAEQNMNAALLSDE-LGIAVRSDDP-KEVISRSKIEALVRKVMVEEEGEEMRRKVKKLRDTAEMSLSIDGG 453 (481)
T ss_pred CCCEEecCccchhHHHHHHHHHH-hCeeEEecCC-CCcccHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhcCCCC
Confidence 999999999999999999995 6 7999999752 23489999999999999763 699999999999999994 59
Q ss_pred CchHHHHHHHHHHHHhhc
Q 012212 444 GSSFRNFESFISDIKMLI 461 (468)
Q Consensus 444 g~~~~~~~~~~~~~~~~~ 461 (468)
|||.+++++|+++++...
T Consensus 454 GSS~~~l~~~v~~~~~~~ 471 (481)
T PLN02992 454 GVAHESLCRVTKECQRFL 471 (481)
T ss_pred CchHHHHHHHHHHHHHHH
Confidence 999999999999988543
|
|
| >PLN02670 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-61 Score=470.69 Aligned_cols=436 Identities=28% Similarity=0.421 Sum_probs=323.5
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcC----CCCCCCcCCC
Q 012212 3 RQPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIP----DGLELQAADR 78 (468)
Q Consensus 3 ~~~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~----~~~~~~~~~~ 78 (468)
.+.||+++|++++||++|++.||+.|+.||+.|||++++.+...+..... .....++++.+| +++++.....
T Consensus 5 ~~~HVvl~P~paqGHi~P~l~LAk~La~~G~~vT~v~t~~n~~~~~~~~~----~~~~~i~~~~lp~p~~dglp~~~~~~ 80 (472)
T PLN02670 5 EVLHVAMFPWLAMGHLIPFLRLSKLLAQKGHKISFISTPRNLHRLPKIPS----QLSSSITLVSFPLPSVPGLPSSAESS 80 (472)
T ss_pred CCcEEEEeCChhhhHHHHHHHHHHHHHhCCCEEEEEeCCchHHhhhhccc----cCCCCeeEEECCCCccCCCCCCcccc
Confidence 56799999999999999999999999999999999999988766653211 111358999888 5555432111
Q ss_pred CCH----HHHHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCcccHHHHHHHhCCceEEEcccchHHHHHHhhhhh
Q 012212 79 EDP----LKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVGSALEVAESMGIARAAVVPFGPGSLALSLQFPK 154 (468)
Q Consensus 79 ~~~----~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~ 154 (468)
.+. ..++....+.+++.++++++. .++++||+|.+..|+..+|+.+|||+++++++++.......+++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~-------~~~~cvI~D~f~~wa~~vA~~~gIP~~~f~~~~a~~~~~~~~~~~ 153 (472)
T PLN02670 81 TDVPYTKQQLLKKAFDLLEPPLTTFLET-------SKPDWIIYDYASHWLPSIAAELGISKAFFSLFTAATLSFIGPPSS 153 (472)
T ss_pred cccchhhHHHHHHHHHHhHHHHHHHHHh-------CCCcEEEECCcchhHHHHHHHcCCCEEEEehhhHHHHHHHhhhHh
Confidence 122 123334445566666666655 358999999999999999999999999999999887776554432
Q ss_pred HhhcCCCCCCCcccccCCcccccCCC----c--cCcccccCcCCCCCChhHHHHHHHHHHHHHhhccccEEEEcCcccCC
Q 012212 155 LLEAGIIDPNGFAILNDGLISLSDEI----P--AWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELD 228 (468)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le 228 (468)
....+... .........|+. + .+...+++ .+.............+.+....+.+++.+++||+.+||
T Consensus 154 ~~~~~~~~------~~~~~~~~~p~~~P~~~~~~~~~~dlp-~~~~~~~~~~~~~~~~~~~~~~~~~~~gvlvNTf~eLE 226 (472)
T PLN02670 154 LMEGGDLR------STAEDFTVVPPWVPFESNIVFRYHEVT-KYVEKTEEDETGPSDSVRFGFAIGGSDVVIIRSSPEFE 226 (472)
T ss_pred hhhcccCC------CccccccCCCCcCCCCccccccHHHhh-HHHhccCccchHHHHHHHHHhhcccCCEEEEeCHHHHh
Confidence 22222211 100111112322 1 12333444 22211110111122233444456688999999999999
Q ss_pred hhhhccC-----CCceeeccccCCC-CCCCCCCCCCCCCCchhhhhhcccCccEEEEEecccccCCHHHHHHHHHHHHhC
Q 012212 229 SPACDLI-----PNILPIGPLLASN-HSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALGLESL 302 (468)
Q Consensus 229 ~~~~~~~-----p~v~~vGpl~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~a~~~~ 302 (468)
....+.. ++++.|||++... ....+.....+..+++.+||+++++++||||||||...++.+++++++.+|+.+
T Consensus 227 ~~~l~~l~~~~~~~v~~VGPl~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gl~~s 306 (472)
T PLN02670 227 PEWFDLLSDLYRKPIIPIGFLPPVIEDDEEDDTIDVKGWVRIKEWLDKQRVNSVVYVALGTEASLRREEVTELALGLEKS 306 (472)
T ss_pred HHHHHHHHHhhCCCeEEEecCCccccccccccccccchhHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHHC
Confidence 8765543 5799999997531 111000000011256899999998889999999999999999999999999999
Q ss_pred CCCEEEEEcCCCC--CCcccCCchhHHHHhCCCceEE-cccChHHHhcCCCCCceeeccCchhHHHhhhcCCceeccccc
Q 012212 303 QKPFLWVIRQDFM--NGSRAKFPDGFIERVSNRGKIV-EWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYF 379 (468)
Q Consensus 303 ~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~nv~~~-~~~p~~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~~ 379 (468)
+++|+|++....+ .+....+|++|.+++.++..++ +|+||.+||+|+++++||||||+||++||+++|||||++|++
T Consensus 307 ~~~FlWv~r~~~~~~~~~~~~lp~~f~~~~~~rG~vv~~W~PQ~~IL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~ 386 (472)
T PLN02670 307 ETPFFWVLRNEPGTTQNALEMLPDGFEERVKGRGMIHVGWVPQVKILSHESVGGFLTHCGWNSVVEGLGFGRVLILFPVL 386 (472)
T ss_pred CCCEEEEEcCCcccccchhhcCChHHHHhccCCCeEEeCcCCHHHHhcCcccceeeecCCcchHHHHHHcCCCEEeCcch
Confidence 9999999985311 1112358999999988887775 999999999999999999999999999999999999999999
Q ss_pred cchhhhHHHHHHHhhceeEeeccC-CCccCHHHHHHHHHHHhcCh---HHHHHHHHHHHHHHHHhcCCCchHHHHHHHHH
Q 012212 380 SDQYQNRNYICEAWKIGLQFFADE-NGIITRQEIQRKVLTLLKND---DIRSNSLKLKEVARKSLLGGGSSFRNFESFIS 455 (468)
Q Consensus 380 ~DQ~~na~rv~~~lG~g~~l~~~~-~~~~t~~~l~~ai~~~l~~~---~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 455 (468)
+||+.||+++++ +|+|+.++..+ ++.++.++|+++|+++|.|+ +||+||+++++++++ .+....++++|++
T Consensus 387 ~DQ~~Na~~v~~-~g~Gv~l~~~~~~~~~~~e~i~~av~~vm~~~~g~~~r~~a~~l~~~~~~----~~~~~~~~~~~~~ 461 (472)
T PLN02670 387 NEQGLNTRLLHG-KKLGLEVPRDERDGSFTSDSVAESVRLAMVDDAGEEIRDKAKEMRNLFGD----MDRNNRYVDELVH 461 (472)
T ss_pred hccHHHHHHHHH-cCeeEEeeccccCCcCcHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHhC----cchhHHHHHHHHH
Confidence 999999999998 59999997533 34589999999999999876 699999999999998 7888999999999
Q ss_pred HHHhhc
Q 012212 456 DIKMLI 461 (468)
Q Consensus 456 ~~~~~~ 461 (468)
.+.+++
T Consensus 462 ~l~~~~ 467 (472)
T PLN02670 462 YLRENR 467 (472)
T ss_pred HHHHhc
Confidence 999887
|
|
| >PLN02448 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-61 Score=474.52 Aligned_cols=432 Identities=29% Similarity=0.475 Sum_probs=330.8
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHHC--CCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCCCCCCCcCCCCC
Q 012212 3 RQPHVLVIPYPAQGHVAPLMKLATKIAER--AIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDGLELQAADRED 80 (468)
Q Consensus 3 ~~~~Il~~~~~~~GH~~p~~~LA~~L~~r--GH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 80 (468)
...||+++|+|+.||++|++.||+.|+.| ||+|||++++.+...+.+.. ...+++|+.+|++.+.......+
T Consensus 9 ~~~hVvlvp~pa~GHi~P~l~LA~~L~~~~~G~~VT~~~t~~~~~~i~~~~------~~~gi~fv~lp~~~p~~~~~~~~ 82 (459)
T PLN02448 9 TSCHVVAMPYPGRGHINPMMNLCKLLASRKPDILITFVVTEEWLGLIGSDP------KPDNIRFATIPNVIPSELVRAAD 82 (459)
T ss_pred CCcEEEEECCcccccHHHHHHHHHHHHcCCCCcEEEEEeCCchHhHhhccC------CCCCEEEEECCCCCCCccccccC
Confidence 46899999999999999999999999999 99999999999888777632 11469999999765443212234
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCcccHHHHHHHhCCceEEEcccchHHHHHHhhhhhHhhcCC
Q 012212 81 PLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVGSALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGI 160 (468)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~ 160 (468)
...++..+.+.+.+.++++++.+. .++|+||+|.++.|+..+|+.+|||++.++++++.......+++.....+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~VI~D~~~~wa~~vA~~lgIP~v~f~~~~a~~~~~~~~~~~~~~~~~ 157 (459)
T PLN02448 83 FPGFLEAVMTKMEAPFEQLLDRLE-----PPVTAIVADTYLFWAVGVGNRRNIPVASLWTMSATFFSVFYHFDLLPQNGH 157 (459)
T ss_pred HHHHHHHHHHHhHHHHHHHHHhcC-----CCcEEEEECCccHHHHHHHHHhCCCeEEEEhHHHHHHHHHHHhhhhhhccC
Confidence 445555555566677777777653 358999999999999999999999999999999877776666543322111
Q ss_pred CCCCCcccc-cCCcccccCCCccCcccccCcCCCCCChhHHHHHHHHHHHHHhhccccEEEEcCcccCChhhhcc-----
Q 012212 161 IDPNGFAIL-NDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACDL----- 234 (468)
Q Consensus 161 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~~~~----- 234 (468)
.+.. .+ . .......+|+++.+...+++ .+.... .......+.+......+++.+++||+.+||....+.
T Consensus 158 ~~~~-~~-~~~~~~~~~iPg~~~l~~~dlp-~~~~~~--~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~~~ 232 (459)
T PLN02448 158 FPVE-LS-ESGEERVDYIPGLSSTRLSDLP-PIFHGN--SRRVLKRILEAFSWVPKAQYLLFTSFYELEAQAIDALKSKF 232 (459)
T ss_pred CCCc-cc-cccCCccccCCCCCCCChHHCc-hhhcCC--chHHHHHHHHHHhhcccCCEEEEccHHHhhHHHHHHHHhhc
Confidence 1100 00 0 01112246777666666666 333222 112334445555566678899999999999864332
Q ss_pred CCCceeeccccCCCCCCCCCCCCC--CCCCchhhhhhcccCccEEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEcC
Q 012212 235 IPNILPIGPLLASNHSGDLDGNFW--SEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALGLESLQKPFLWVIRQ 312 (468)
Q Consensus 235 ~p~v~~vGpl~~~~~~~~~~~~~~--~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~l~~~~~ 312 (468)
.++++.|||+.............+ ..+.++.+|++.++++++|||||||....+.+++++++.+|+..+.+|||++..
T Consensus 233 ~~~~~~iGP~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvsfGs~~~~~~~~~~~~~~~l~~~~~~~lw~~~~ 312 (459)
T PLN02448 233 PFPVYPIGPSIPYMELKDNSSSSNNEDNEPDYFQWLDSQPEGSVLYVSLGSFLSVSSAQMDEIAAGLRDSGVRFLWVARG 312 (459)
T ss_pred CCceEEecCcccccccCCCccccccccchhHHHHHHcCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCEEEEEcC
Confidence 357999999976422110001101 123478899999888899999999998888999999999999999999998763
Q ss_pred CCCCCcccCCchhHHHHhCCCceEEcccChHHHhcCCCCCceeeccCchhHHHhhhcCCceeccccccchhhhHHHHHHH
Q 012212 313 DFMNGSRAKFPDGFIERVSNRGKIVEWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEA 392 (468)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~ 392 (468)
. ..++.++.++|+++++|+||.+||.|+++++||||||+||++||+++|||||++|+++||+.||+++++.
T Consensus 313 ~---------~~~~~~~~~~~~~v~~w~pQ~~iL~h~~v~~fvtHgG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~ 383 (459)
T PLN02448 313 E---------ASRLKEICGDMGLVVPWCDQLKVLCHSSVGGFWTHCGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVED 383 (459)
T ss_pred c---------hhhHhHhccCCEEEeccCCHHHHhccCccceEEecCchhHHHHHHHcCCCEEeccccccchhhHHHHHHH
Confidence 2 1245555667899999999999999999999999999999999999999999999999999999999876
Q ss_pred hhceeEeecc--CCCccCHHHHHHHHHHHhcCh-----HHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHh
Q 012212 393 WKIGLQFFAD--ENGIITRQEIQRKVLTLLKND-----DIRSNSLKLKEVARKSLLGGGSSFRNFESFISDIKM 459 (468)
Q Consensus 393 lG~g~~l~~~--~~~~~t~~~l~~ai~~~l~~~-----~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 459 (468)
||+|+.+... +++.+++++|+++|+++|.|+ +||+||++|+++++.++.+||||.+++++||+.+++
T Consensus 384 ~g~G~~~~~~~~~~~~~~~~~l~~av~~vl~~~~~~~~~~r~~a~~~~~~~~~a~~~gGss~~~l~~~v~~~~~ 457 (459)
T PLN02448 384 WKIGWRVKREVGEETLVGREEIAELVKRFMDLESEEGKEMRRRAKELQEICRGAIAKGGSSDTNLDAFIRDISQ 457 (459)
T ss_pred hCceEEEecccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhc
Confidence 7999998642 123479999999999999864 699999999999999999999999999999999874
|
|
| >PLN03007 UDP-glucosyltransferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-61 Score=474.81 Aligned_cols=444 Identities=26% Similarity=0.461 Sum_probs=318.1
Q ss_pred CC-CCCEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhcc-CCC--CCeEEEEcC---CCCCC
Q 012212 1 MS-RQPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAE-DSS--SQIKLVTIP---DGLEL 73 (468)
Q Consensus 1 m~-~~~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~-~~~--~~i~~~~~~---~~~~~ 73 (468)
|+ ++.||+|+|+|+.||++|++.||+.|+.|||+|||++++.+...+++.+..... ... ..+.+..+| .+++.
T Consensus 1 ~~~~~~hVvlvp~pa~GHi~P~L~LAk~L~~rG~~VT~vtt~~~~~~i~~~~a~~~~~~~~~~~~~~~~~~p~~~~glP~ 80 (482)
T PLN03007 1 MNHEKLHILFFPFMAHGHMIPTLDMAKLFSSRGAKSTILTTPLNAKIFEKPIEAFKNLNPGLEIDIQIFNFPCVELGLPE 80 (482)
T ss_pred CCCCCcEEEEECCCccccHHHHHHHHHHHHhCCCEEEEEECCCchhhhhhhhhhhcccCCCCcceEEEeeCCCCcCCCCC
Confidence 55 467999999999999999999999999999999999999998887776543210 111 134445555 33433
Q ss_pred CcCC--------CCCHHHHHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCcccHHHHHHHhCCceEEEcccchHH
Q 012212 74 QAAD--------REDPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVGSALEVAESMGIARAAVVPFGPGS 145 (468)
Q Consensus 74 ~~~~--------~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~ 145 (468)
.... ......++..+..... .+.+.++++... .+||+||+|.++.|+..+|+.+|||.+++++++++.
T Consensus 81 g~e~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~l~~~l~~---~~~~~IV~D~~~~w~~~vA~~lgIP~v~f~~~~a~~ 156 (482)
T PLN03007 81 GCENVDFITSNNNDDSGDLFLKFLFSTK-YFKDQLEKLLET---TRPDCLVADMFFPWATEAAEKFGVPRLVFHGTGYFS 156 (482)
T ss_pred CcccccccccccccchHHHHHHHHHHHH-HHHHHHHHHHhc---CCCCEEEECCcchhHHHHHHHhCCCeEEeecccHHH
Confidence 2110 0112233444432222 233333333222 469999999999999999999999999999998877
Q ss_pred HHHHhhhhhHhhcCCCCCCCcccccCCcccccCCCcc---CcccccCcCCCCCChhHHHHHHHHHHHHHhhccccEEEEc
Q 012212 146 LALSLQFPKLLEAGIIDPNGFAILNDGLISLSDEIPA---WKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINN 222 (468)
Q Consensus 146 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 222 (468)
......+....+..... .. .....+|+++. +...+++ .. .. ...+...+....+....++.+++|
T Consensus 157 ~~~~~~~~~~~~~~~~~------~~-~~~~~~pg~p~~~~~~~~~~~-~~--~~--~~~~~~~~~~~~~~~~~~~~vl~N 224 (482)
T PLN03007 157 LCASYCIRVHKPQKKVA------SS-SEPFVIPDLPGDIVITEEQIN-DA--DE--ESPMGKFMKEVRESEVKSFGVLVN 224 (482)
T ss_pred HHHHHHHHhcccccccC------CC-CceeeCCCCCCccccCHHhcC-CC--CC--chhHHHHHHHHHhhcccCCEEEEE
Confidence 65544322111100000 00 01112455542 1222222 11 11 112233334444567788999999
Q ss_pred CcccCChhhhccC-----CCceeeccccCCCCCCC---C-CCCCCCCCCchhhhhhcccCccEEEEEecccccCCHHHHH
Q 012212 223 SVYELDSPACDLI-----PNILPIGPLLASNHSGD---L-DGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFA 293 (468)
Q Consensus 223 ~~~~le~~~~~~~-----p~v~~vGpl~~~~~~~~---~-~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~ 293 (468)
|+.+||.+..+.. ..+++|||+........ . ....+..+.++.+||+.+++++||||||||....+.+.+.
T Consensus 225 t~~~le~~~~~~~~~~~~~~~~~VGPl~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~ 304 (482)
T PLN03007 225 SFYELESAYADFYKSFVAKRAWHIGPLSLYNRGFEEKAERGKKANIDEQECLKWLDSKKPDSVIYLSFGSVASFKNEQLF 304 (482)
T ss_pred CHHHHHHHHHHHHHhccCCCEEEEccccccccccccccccCCccccchhHHHHHHhcCCCCceEEEeecCCcCCCHHHHH
Confidence 9999998755544 36899999865322100 0 0111223567999999998889999999999888899999
Q ss_pred HHHHHHHhCCCCEEEEEcCCCCC-CcccCCchhHHHHh-CCCceEEcccChHHHhcCCCCCceeeccCchhHHHhhhcCC
Q 012212 294 ELALGLESLQKPFLWVIRQDFMN-GSRAKFPDGFIERV-SNRGKIVEWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGV 371 (468)
Q Consensus 294 ~~~~a~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~-~~nv~~~~~~p~~~ll~~~~~~~~I~hGG~~s~~eal~~Gv 371 (468)
+++.+|+.++++|+|+++...+. +....+|+++.+++ +.|+++.+|+||.+||+|+++++||||||+||++||+++||
T Consensus 305 ~~~~~l~~~~~~flw~~~~~~~~~~~~~~lp~~~~~r~~~~g~~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GV 384 (482)
T PLN03007 305 EIAAGLEGSGQNFIWVVRKNENQGEKEEWLPEGFEERTKGKGLIIRGWAPQVLILDHQATGGFVTHCGWNSLLEGVAAGL 384 (482)
T ss_pred HHHHHHHHCCCCEEEEEecCCcccchhhcCCHHHHHHhccCCEEEecCCCHHHHhccCccceeeecCcchHHHHHHHcCC
Confidence 99999999999999999864221 11235888998886 56777779999999999999999999999999999999999
Q ss_pred ceeccccccchhhhHHHHHHHhhceeEeecc-----CCCccCHHHHHHHHHHHhcCh---HHHHHHHHHHHHHHHHhcCC
Q 012212 372 PFLCWPYFSDQYQNRNYICEAWKIGLQFFAD-----ENGIITRQEIQRKVLTLLKND---DIRSNSLKLKEVARKSLLGG 443 (468)
Q Consensus 372 P~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~-----~~~~~t~~~l~~ai~~~l~~~---~~r~~a~~l~~~~~~~~~~~ 443 (468)
|||++|+++||+.||+++++.+++|+.+... +.+.++.++|+++|+++|.|+ +||+||+++++.+++++.+|
T Consensus 385 P~v~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~l~~av~~~m~~~~~~~~r~~a~~~~~~a~~a~~~g 464 (482)
T PLN03007 385 PMVTWPVGAEQFYNEKLVTQVLRTGVSVGAKKLVKVKGDFISREKVEKAVREVIVGEEAEERRLRAKKLAEMAKAAVEEG 464 (482)
T ss_pred CeeeccchhhhhhhHHHHHHhhcceeEeccccccccccCcccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999987545666665321 223489999999999999988 79999999999999999999
Q ss_pred CchHHHHHHHHHHHHhh
Q 012212 444 GSSFRNFESFISDIKML 460 (468)
Q Consensus 444 g~~~~~~~~~~~~~~~~ 460 (468)
|||.+++++||+.+.+.
T Consensus 465 GsS~~~l~~~v~~~~~~ 481 (482)
T PLN03007 465 GSSFNDLNKFMEELNSR 481 (482)
T ss_pred CcHHHHHHHHHHHHHhc
Confidence 99999999999998764
|
|
| >PLN00164 glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-61 Score=469.52 Aligned_cols=439 Identities=24% Similarity=0.419 Sum_probs=333.0
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHHCC----CEEEEEECCcchH----HHHHhhhhhccCCCCCeEEEEcCCCCCCC
Q 012212 3 RQPHVLVIPYPAQGHVAPLMKLATKIAERA----IKVTVVNTQFIHK----KIIASLQEKAEDSSSQIKLVTIPDGLELQ 74 (468)
Q Consensus 3 ~~~~Il~~~~~~~GH~~p~~~LA~~L~~rG----H~Vt~~~~~~~~~----~i~~~~~~~~~~~~~~i~~~~~~~~~~~~ 74 (468)
++.||+|+|++++||++|++.||+.|+.|| +.|||++++.+.. .+........ .....++|..+|.+..+.
T Consensus 2 ~~~HVVlvPfpaqGHi~P~l~LAk~La~~g~~~~~~vT~~~t~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~lp~~~~p~ 80 (480)
T PLN00164 2 AAPTVVLLPVWGSGHLMSMLEAGKRLLASSGGGALSLTVLVMPPPTPESASEVAAHVRREA-ASGLDIRFHHLPAVEPPT 80 (480)
T ss_pred CCCEEEEeCCcchhHHHHHHHHHHHHHhCCCCCcEEEEEEEcCCCccchhHHHHHHHhhcc-cCCCCEEEEECCCCCCCC
Confidence 446999999999999999999999999997 7999999987532 3333211101 111259999999764322
Q ss_pred cCCCCCHHHHHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCcccHHHHHHHhCCceEEEcccchHHHHHHhhhhh
Q 012212 75 AADREDPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVGSALEVAESMGIARAAVVPFGPGSLALSLQFPK 154 (468)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~ 154 (468)
..++...++..+...+.+.++++++.+. .++++||+|.+..|+..+|+.+|||++.++++++.......++|.
T Consensus 81 --~~e~~~~~~~~~~~~~~~~l~~~L~~l~-----~pv~cIV~D~f~~Wa~dVA~elgIP~v~F~t~sA~~~~~~~~~~~ 153 (480)
T PLN00164 81 --DAAGVEEFISRYIQLHAPHVRAAIAGLS-----CPVAALVVDFFCTPLLDVARELAVPAYVYFTSTAAMLALMLRLPA 153 (480)
T ss_pred --ccccHHHHHHHHHHhhhHHHHHHHHhcC-----CCceEEEECCcchhHHHHHHHhCCCEEEEECccHHHHHHHhhhhh
Confidence 2224445555555666777777776651 347999999999999999999999999999999988887777654
Q ss_pred HhhcCCCCCCCcccccCCcccccCCCccCcccccCcCCCCCChhHHHHHHHHHHHHHhhccccEEEEcCcccCChhhhcc
Q 012212 155 LLEAGIIDPNGFAILNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACDL 234 (468)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~~~~ 234 (468)
.... .. .... ... ....+|+++.++..+++ .+...... ..+..+....+...+++.+++||+.+||....+.
T Consensus 154 ~~~~--~~-~~~~-~~~-~~~~iPGlp~l~~~dlp-~~~~~~~~--~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~ 225 (480)
T PLN00164 154 LDEE--VA-VEFE-EME-GAVDVPGLPPVPASSLP-APVMDKKS--PNYAWFVYHGRRFMEAAGIIVNTAAELEPGVLAA 225 (480)
T ss_pred hccc--cc-Cccc-ccC-cceecCCCCCCChHHCC-chhcCCCc--HHHHHHHHHHHhhhhcCEEEEechHHhhHHHHHH
Confidence 3211 00 0011 100 11247888777777777 33322211 1122333344556789999999999999865432
Q ss_pred C-----------CCceeeccccCCCCCCCCCCCCCCCCCchhhhhhcccCccEEEEEecccccCCHHHHHHHHHHHHhCC
Q 012212 235 I-----------PNILPIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALGLESLQ 303 (468)
Q Consensus 235 ~-----------p~v~~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~a~~~~~ 303 (468)
. |+++.|||++...... ..+..++++.+||+.+++++||||+|||....+.+++.+++.+|+.++
T Consensus 226 ~~~~~~~~~~~~~~v~~vGPl~~~~~~~----~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~q~~ela~gL~~s~ 301 (480)
T PLN00164 226 IADGRCTPGRPAPTVYPIGPVISLAFTP----PAEQPPHECVRWLDAQPPASVVFLCFGSMGFFDAPQVREIAAGLERSG 301 (480)
T ss_pred HHhccccccCCCCceEEeCCCccccccC----CCccchHHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHHHcC
Confidence 2 5799999998532111 112356679999999988899999999998889999999999999999
Q ss_pred CCEEEEEcCCCCC--------CcccCCchhHHHHhCCCceEE-cccChHHHhcCCCCCceeeccCchhHHHhhhcCCcee
Q 012212 304 KPFLWVIRQDFMN--------GSRAKFPDGFIERVSNRGKIV-EWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFL 374 (468)
Q Consensus 304 ~~~l~~~~~~~~~--------~~~~~~~~~~~~~~~~nv~~~-~~~p~~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v 374 (468)
.+|+|++...... +....+|+++.+++.++..++ +|+||.+||.|+++++||||||+||++||+++|||||
T Consensus 302 ~~flWv~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~PQ~~iL~h~~vg~fvtH~GwnS~~Eai~~GVP~l 381 (480)
T PLN00164 302 HRFLWVLRGPPAAGSRHPTDADLDELLPEGFLERTKGRGLVWPTWAPQKEILAHAAVGGFVTHCGWNSVLESLWHGVPMA 381 (480)
T ss_pred CCEEEEEcCCcccccccccccchhhhCChHHHHHhcCCCeEEeecCCHHHHhcCcccCeEEeecccchHHHHHHcCCCEE
Confidence 9999999853210 111247889999988877777 9999999999999999999999999999999999999
Q ss_pred ccccccchhhhHHHHHHHhhceeEeeccC--CCccCHHHHHHHHHHHhcCh-----HHHHHHHHHHHHHHHHhcCCCchH
Q 012212 375 CWPYFSDQYQNRNYICEAWKIGLQFFADE--NGIITRQEIQRKVLTLLKND-----DIRSNSLKLKEVARKSLLGGGSSF 447 (468)
Q Consensus 375 ~~P~~~DQ~~na~rv~~~lG~g~~l~~~~--~~~~t~~~l~~ai~~~l~~~-----~~r~~a~~l~~~~~~~~~~~g~~~ 447 (468)
++|+++||+.||+++++.||+|+.+..++ ++.++.++|.++|+++|.|+ ++|++|++|++++++++.+||||.
T Consensus 382 ~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~~~~~~~~~e~l~~av~~vm~~~~~~~~~~r~~a~~~~~~~~~a~~~gGSS~ 461 (480)
T PLN00164 382 PWPLYAEQHLNAFELVADMGVAVAMKVDRKRDNFVEAAELERAVRSLMGGGEEEGRKAREKAAEMKAACRKAVEEGGSSY 461 (480)
T ss_pred eCCccccchhHHHHHHHHhCeEEEeccccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhcCCCcHH
Confidence 99999999999988754479999986431 23479999999999999764 389999999999999999999999
Q ss_pred HHHHHHHHHHHhhc
Q 012212 448 RNFESFISDIKMLI 461 (468)
Q Consensus 448 ~~~~~~~~~~~~~~ 461 (468)
+++++|++++...+
T Consensus 462 ~~l~~~v~~~~~~~ 475 (480)
T PLN00164 462 AALQRLAREIRHGA 475 (480)
T ss_pred HHHHHHHHHHHhcc
Confidence 99999999998554
|
|
| >PLN02208 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-60 Score=462.29 Aligned_cols=415 Identities=22% Similarity=0.375 Sum_probs=307.2
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcC----CCCCCCcC
Q 012212 1 MSRQPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIP----DGLELQAA 76 (468)
Q Consensus 1 m~~~~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~----~~~~~~~~ 76 (468)
|..+.||+++|+++.||++|++.||+.|++|||+|||++++.+...+.+.+ .....+++..++ ++++....
T Consensus 1 ~~~~~hvv~~P~paqGHi~P~l~LAk~La~~G~~VT~vtt~~~~~~i~~~~-----a~~~~i~~~~l~~p~~dgLp~g~~ 75 (442)
T PLN02208 1 MEPKFHAFMFPWFAFGHMIPFLHLANKLAEKGHRVTFLLPKKAQKQLEHHN-----LFPDSIVFHPLTIPPVNGLPAGAE 75 (442)
T ss_pred CCCCCEEEEecCccccHHHHHHHHHHHHHhCCCEEEEEeccchhhhhhccc-----CCCCceEEEEeCCCCccCCCCCcc
Confidence 667889999999999999999999999999999999999998877766533 111346666543 34443321
Q ss_pred CCCCHH-HHHHHH---HHHhhHHHHHHHHHHhhCCCCCCceEEEecCCcccHHHHHHHhCCceEEEcccchHHHHHHhhh
Q 012212 77 DREDPL-KLGESV---ARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVGSALEVAESMGIARAAVVPFGPGSLALSLQF 152 (468)
Q Consensus 77 ~~~~~~-~~~~~~---~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~ 152 (468)
...++. .....+ ...+.+.++++++. .++|+||+| +..|+..+|+.+|||++.++++++.... ..++
T Consensus 76 ~~~~l~~~l~~~~~~~~~~~~~~l~~~L~~-------~~~~cVV~D-~~~wa~~vA~e~giP~~~f~~~~a~~~~-~~~~ 146 (442)
T PLN02208 76 TTSDIPISMDNLLSEALDLTRDQVEAAVRA-------LRPDLIFFD-FAQWIPEMAKEHMIKSVSYIIVSATTIA-HTHV 146 (442)
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhh-------CCCeEEEEC-CcHhHHHHHHHhCCCEEEEEhhhHHHHH-HHcc
Confidence 111222 111222 22333444444433 468999999 5789999999999999999999887653 3332
Q ss_pred hhHhhcCCCCCCCcccccCCcccccCCCcc----CcccccCcCCCCCChhHHHHHHHHHH-HHHhhccccEEEEcCcccC
Q 012212 153 PKLLEAGIIDPNGFAILNDGLISLSDEIPA----WKRNEYTWSFPDEPSEQKILLGIICA-VIQAVKISNWIINNSVYEL 227 (468)
Q Consensus 153 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~l 227 (468)
+. +..+ ...|+++. ++..+++ .+... ...+..+.+ ..+...+++.+++||+.+|
T Consensus 147 ~~----~~~~------------~~~pglp~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~vl~Ntf~eL 205 (442)
T PLN02208 147 PG----GKLG------------VPPPGYPSSKVLFRENDAH-ALATL----SIFYKRLYHQITTGLKSCDVIALRTCKEI 205 (442)
T ss_pred Cc----cccC------------CCCCCCCCcccccCHHHcC-ccccc----chHHHHHHHHHHhhhccCCEEEEECHHHH
Confidence 21 0000 01345543 2233344 22111 112222222 2245668999999999999
Q ss_pred Chhhhc-----cCCCceeeccccCCCCCCCCCCCCCCCCCchhhhhhcccCccEEEEEecccccCCHHHHHHHHHHHHhC
Q 012212 228 DSPACD-----LIPNILPIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALGLESL 302 (468)
Q Consensus 228 e~~~~~-----~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~a~~~~ 302 (468)
|....+ +.|+++.|||++...... ...+.++.+||+++++++||||||||...++.+++.+++.+++..
T Consensus 206 E~~~~~~~~~~~~~~v~~vGpl~~~~~~~------~~~~~~~~~wLd~~~~~sVvyvSfGS~~~l~~~q~~e~~~~l~~s 279 (442)
T PLN02208 206 EGKFCDYISRQYHKKVLLTGPMFPEPDTS------KPLEEQWSHFLSGFPPKSVVFCSLGSQIILEKDQFQELCLGMELT 279 (442)
T ss_pred HHHHHHHHHhhcCCCEEEEeecccCcCCC------CCCHHHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHHHhC
Confidence 986543 347999999998653211 125678999999998889999999999888999999999998888
Q ss_pred CCCEEEEEcCCCC-CCcccCCchhHHHHhCC-CceEEcccChHHHhcCCCCCceeeccCchhHHHhhhcCCceecccccc
Q 012212 303 QKPFLWVIRQDFM-NGSRAKFPDGFIERVSN-RGKIVEWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFS 380 (468)
Q Consensus 303 ~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~-nv~~~~~~p~~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~~~ 380 (468)
+.+++|++....+ .+....+|++|.+++.+ |+++.+|+||.+||+|+++++||||||+||++||+++|||||++|+++
T Consensus 280 ~~pf~wv~r~~~~~~~~~~~lp~~f~~r~~~~g~~v~~W~PQ~~iL~H~~v~~FvtHcG~nS~~Eai~~GVP~l~~P~~~ 359 (442)
T PLN02208 280 GLPFLIAVKPPRGSSTVQEGLPEGFEERVKGRGVVWGGWVQQPLILDHPSIGCFVNHCGPGTIWESLVSDCQMVLIPFLS 359 (442)
T ss_pred CCcEEEEEeCCCcccchhhhCCHHHHHHHhcCCcEeeccCCHHHHhcCCccCeEEccCCchHHHHHHHcCCCEEecCcch
Confidence 8999999985421 11224689999998755 555559999999999999999999999999999999999999999999
Q ss_pred chhhhHHHHHHHhhceeEeeccCCCccCHHHHHHHHHHHhcChH-----HHHHHHHHHHHHHHHhcCCCchHHHHHHHHH
Q 012212 381 DQYQNRNYICEAWKIGLQFFADENGIITRQEIQRKVLTLLKNDD-----IRSNSLKLKEVARKSLLGGGSSFRNFESFIS 455 (468)
Q Consensus 381 DQ~~na~rv~~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~~~-----~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 455 (468)
||+.||+++++.+|+|+.++..+++.++.++|+++|+++|+|++ +|++++++++.+.+ +|||.+++++||+
T Consensus 360 DQ~~na~~~~~~~g~gv~~~~~~~~~~~~~~l~~ai~~~m~~~~e~g~~~r~~~~~~~~~~~~----~gsS~~~l~~~v~ 435 (442)
T PLN02208 360 DQVLFTRLMTEEFEVSVEVSREKTGWFSKESLSNAIKSVMDKDSDLGKLVRSNHTKLKEILVS----PGLLTGYVDKFVE 435 (442)
T ss_pred hhHHHHHHHHHHhceeEEeccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHhc----CCcHHHHHHHHHH
Confidence 99999998765469999997643456899999999999997653 99999999999854 7899999999999
Q ss_pred HHHhh
Q 012212 456 DIKML 460 (468)
Q Consensus 456 ~~~~~ 460 (468)
++++.
T Consensus 436 ~l~~~ 440 (442)
T PLN02208 436 ELQEY 440 (442)
T ss_pred HHHHh
Confidence 99764
|
|
| >PLN03004 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-61 Score=462.16 Aligned_cols=430 Identities=25% Similarity=0.452 Sum_probs=319.4
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHHCC--CEEEE--EECCcchHHHHHhhhhhccCCCCCeEEEEcCCCCCCCcC--C
Q 012212 4 QPHVLVIPYPAQGHVAPLMKLATKIAERA--IKVTV--VNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDGLELQAA--D 77 (468)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~~~LA~~L~~rG--H~Vt~--~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~--~ 77 (468)
..||+++|++++||++|++.||+.|+.+| +.||+ ++++.+...+.+...... ....+++|+.+|.+...... .
T Consensus 3 ~~Hvvl~P~p~qGHi~P~l~LA~~La~~g~~~~vti~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~lp~~~~~~~~~~~ 81 (451)
T PLN03004 3 EEAIVLYPAPPIGHLVSMVELGKTILSKNPSLSIHIILVPPPYQPESTATYISSVS-SSFPSITFHHLPAVTPYSSSSTS 81 (451)
T ss_pred CcEEEEeCCcccchHHHHHHHHHHHHhCCCceEEEEEEecCcchhhhhhhhhcccc-CCCCCeEEEEcCCCCCCCCcccc
Confidence 36999999999999999999999999998 55666 444432222221110100 11236999999976532221 1
Q ss_pred CCCHHHHHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCcccHHHHHHHhCCceEEEcccchHHHHHHhhhhhHhh
Q 012212 78 REDPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVGSALEVAESMGIARAAVVPFGPGSLALSLQFPKLLE 157 (468)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~ 157 (468)
..+....+..+...+.+.++++++++... .++++||+|.+..|+..+|+.+|||.+.++++++.......++|....
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~---~pv~cII~D~~~~Wa~~vA~~lgIP~v~F~t~sA~~~~~~~~~~~~~~ 158 (451)
T PLN03004 82 RHHHESLLLEILCFSNPSVHRTLFSLSRN---FNVRAMIIDFFCTAVLDITADFTFPVYFFYTSGAACLAFSFYLPTIDE 158 (451)
T ss_pred ccCHHHHHHHHHHhhhHHHHHHHHhcCCC---CCceEEEECCcchhHHHHHHHhCCCEEEEeCHhHHHHHHHHHHHhccc
Confidence 11233344444556677788888776321 345999999999999999999999999999999988887777554221
Q ss_pred cCCCCCCCcccccCCcccccCCCccCcccccCcCCCCCChhHHHHHHHHHHHHHhhccccEEEEcCcccCChhhhccC--
Q 012212 158 AGIIDPNGFAILNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACDLI-- 235 (468)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~~~~~-- 235 (468)
. .+... ........+|+++.++..+++. +...+. ......+.+....+..++.+++||+.+||....+..
T Consensus 159 ~--~~~~~---~~~~~~v~iPg~p~l~~~dlp~-~~~~~~--~~~~~~~~~~~~~~~~~~~vl~NTf~eLE~~~l~~l~~ 230 (451)
T PLN03004 159 T--TPGKN---LKDIPTVHIPGVPPMKGSDMPK-AVLERD--DEVYDVFIMFGKQLSKSSGIIINTFDALENRAIKAITE 230 (451)
T ss_pred c--ccccc---cccCCeecCCCCCCCChHHCch-hhcCCc--hHHHHHHHHHHHhhcccCeeeeeeHHHhHHHHHHHHHh
Confidence 1 00000 0011123578888878888773 332221 123344455556677889999999999998654322
Q ss_pred ----CCceeeccccCCCCCCCCCCCCCCCCCchhhhhhcccCccEEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEc
Q 012212 236 ----PNILPIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALGLESLQKPFLWVIR 311 (468)
Q Consensus 236 ----p~v~~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~l~~~~ 311 (468)
++++.|||++....... .. .+ .+.++.+||+.+++++||||||||...++.+++++++.+|+.++++|+|++.
T Consensus 231 ~~~~~~v~~vGPl~~~~~~~~-~~-~~-~~~~c~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~~FlW~~r 307 (451)
T PLN03004 231 ELCFRNIYPIGPLIVNGRIED-RN-DN-KAVSCLNWLDSQPEKSVVFLCFGSLGLFSKEQVIEIAVGLEKSGQRFLWVVR 307 (451)
T ss_pred cCCCCCEEEEeeeccCccccc-cc-cc-hhhHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHHHCCCCEEEEEc
Confidence 57999999975322110 01 11 2356999999998889999999999999999999999999999999999998
Q ss_pred CCCCCC----ccc-CCchhHHHHhCC-CceEEcccChHHHhcCCCCCceeeccCchhHHHhhhcCCceeccccccchhhh
Q 012212 312 QDFMNG----SRA-KFPDGFIERVSN-RGKIVEWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQN 385 (468)
Q Consensus 312 ~~~~~~----~~~-~~~~~~~~~~~~-nv~~~~~~p~~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~~~DQ~~n 385 (468)
.....+ ... .+|++|++++.+ |+++.+|+||.+||+|+++++||||||+||++||+++|||||++|++.||+.|
T Consensus 308 ~~~~~~~~~~~~~~~lp~gf~er~~~~g~~v~~W~PQ~~iL~H~~v~~FvTH~G~nS~lEal~~GVP~v~~P~~~DQ~~n 387 (451)
T PLN03004 308 NPPELEKTELDLKSLLPEGFLSRTEDKGMVVKSWAPQVPVLNHKAVGGFVTHCGWNSILEAVCAGVPMVAWPLYAEQRFN 387 (451)
T ss_pred CCccccccccchhhhCChHHHHhccCCcEEEEeeCCHHHHhCCCccceEeccCcchHHHHHHHcCCCEEeccccccchhh
Confidence 531100 112 288999999865 55666999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhceeEeeccCCCccCHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHhcCCCchHH
Q 012212 386 RNYICEAWKIGLQFFADENGIITRQEIQRKVLTLLKNDDIRSNSLKLKEVARKSLLGGGSSFR 448 (468)
Q Consensus 386 a~rv~~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~~~~r~~a~~l~~~~~~~~~~~g~~~~ 448 (468)
|+++++.||+|+.++..+.+.++.++|+++|+++|+|++||++++++++..+.++.+||||.+
T Consensus 388 a~~~~~~~g~g~~l~~~~~~~~~~e~l~~av~~vm~~~~~r~~a~~~~~~a~~Av~~GGSS~~ 450 (451)
T PLN03004 388 RVMIVDEIKIAISMNESETGFVSSTEVEKRVQEIIGECPVRERTMAMKNAAELALTETGSSHT 450 (451)
T ss_pred HHHHHHHhCceEEecCCcCCccCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 999975479999997543345899999999999999999999999999999999999999864
|
|
| >PLN02167 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-60 Score=467.46 Aligned_cols=447 Identities=24% Similarity=0.416 Sum_probs=325.5
Q ss_pred CCCCEEEEEcCCCccChHHHHHHHHHHHHCC---CEEEEEECCcchH-HHHHhhhhhccCCCCCeEEEEcCCCCCCCcCC
Q 012212 2 SRQPHVLVIPYPAQGHVAPLMKLATKIAERA---IKVTVVNTQFIHK-KIIASLQEKAEDSSSQIKLVTIPDGLELQAAD 77 (468)
Q Consensus 2 ~~~~~Il~~~~~~~GH~~p~~~LA~~L~~rG---H~Vt~~~~~~~~~-~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 77 (468)
+++.||+|+|+|++||++|++.||+.|+.+| +.||++++..... .......... ...++++|+.+|.+..+....
T Consensus 1 ~~~~hVv~~PfpaqGHi~P~l~LAk~La~~G~~~t~vt~~~t~~~~~~~~~~~~~~~~-~~~~~i~~~~lp~~~~p~~~~ 79 (475)
T PLN02167 1 KKEAELIFVPFPSTGHILVTIEFAKRLINLDRRIHTITILYWSLPFAPQADAFLKSLI-ASEPRIRLVTLPEVQDPPPME 79 (475)
T ss_pred CCccEEEEeCChhhhhHHHHHHHHHHHHhCCCCeEEEEEEECCCCcchhhhHHHhhcc-cCCCCeEEEECCCCCCCcccc
Confidence 3567999999999999999999999999998 4577777654322 1111110000 111369999999654221100
Q ss_pred --CCCHHHHHHHHHHHhhHHHHHHHHHHhhCC-C-CC-CceEEEecCCcccHHHHHHHhCCceEEEcccchHHHHHHhhh
Q 012212 78 --REDPLKLGESVARAMRGCLRDLIEKINQSN-D-CE-PIRCVIADVTVGSALEVAESMGIARAAVVPFGPGSLALSLQF 152 (468)
Q Consensus 78 --~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~-~-~~-~pDlvi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~ 152 (468)
.......+..+...+.+.+++.++.+.... . .. ++++||+|.+..|+..+|+.+|||.++++++++.......++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~pv~cvV~D~f~~Wa~dVA~elgIP~v~F~t~~A~~~~~~~~~ 159 (475)
T PLN02167 80 LFVKASEAYILEFVKKMVPLVRDALSTLVSSRDESDSVRVAGLVLDFFCVPLIDVGNEFNLPSYIFLTCNAGFLGMMKYL 159 (475)
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCeEEEEECCccHHHHHHHHHhCCCEEEEECccHHHHHHHHHH
Confidence 112222333344556666777776653211 0 01 459999999999999999999999999999999888877766
Q ss_pred hhHhhcCCCCCCCcccccCCcccccCCC-ccCcccccCcCCCCCChhHHHHHHHHHHHHHhhccccEEEEcCcccCChhh
Q 012212 153 PKLLEAGIIDPNGFAILNDGLISLSDEI-PAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPA 231 (468)
Q Consensus 153 p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~ 231 (468)
|..... .. ..++.........+|++ +.++..+++ .+..... .+..+.+..+....++.+++||+.+||...
T Consensus 160 ~~~~~~--~~-~~~~~~~~~~~~~iPgl~~~l~~~dlp-~~~~~~~----~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~ 231 (475)
T PLN02167 160 PERHRK--TA-SEFDLSSGEEELPIPGFVNSVPTKVLP-PGLFMKE----SYEAWVEIAERFPEAKGILVNSFTELEPNA 231 (475)
T ss_pred HHhccc--cc-cccccCCCCCeeECCCCCCCCChhhCc-hhhhCcc----hHHHHHHHHHhhcccCEeeeccHHHHHHHH
Confidence 543211 00 00000000112246777 345666665 2222211 122344555567789999999999999865
Q ss_pred hcc-------CCCceeeccccCCCCCCCCCCCCCCCCCchhhhhhcccCccEEEEEecccccCCHHHHHHHHHHHHhCCC
Q 012212 232 CDL-------IPNILPIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALGLESLQK 304 (468)
Q Consensus 232 ~~~-------~p~v~~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~a~~~~~~ 304 (468)
.+. .|++++|||++....... .......+.++.+||+.+++++||||+|||....+.+++.+++.+|+.++.
T Consensus 232 ~~~l~~~~~~~p~v~~vGpl~~~~~~~~-~~~~~~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~ela~~l~~~~~ 310 (475)
T PLN02167 232 FDYFSRLPENYPPVYPVGPILSLKDRTS-PNLDSSDRDRIMRWLDDQPESSVVFLCFGSLGSLPAPQIKEIAQALELVGC 310 (475)
T ss_pred HHHHHhhcccCCeeEEeccccccccccC-CCCCcchhHHHHHHHhcCCCCceEEEeecccccCCHHHHHHHHHHHHhCCC
Confidence 543 278999999986432110 010011235799999999888999999999988899999999999999999
Q ss_pred CEEEEEcCCCCC--CcccCCchhHHHHhCCCceEEcccChHHHhcCCCCCceeeccCchhHHHhhhcCCceeccccccch
Q 012212 305 PFLWVIRQDFMN--GSRAKFPDGFIERVSNRGKIVEWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQ 382 (468)
Q Consensus 305 ~~l~~~~~~~~~--~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~~~DQ 382 (468)
+|||+++..... +....+|+++.|++.+++++++|+||.+||+|++|++||||||+||++||+++|||||++|+++||
T Consensus 311 ~flw~~~~~~~~~~~~~~~lp~~~~er~~~rg~v~~w~PQ~~iL~h~~vg~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ 390 (475)
T PLN02167 311 RFLWSIRTNPAEYASPYEPLPEGFMDRVMGRGLVCGWAPQVEILAHKAIGGFVSHCGWNSVLESLWFGVPIATWPMYAEQ 390 (475)
T ss_pred cEEEEEecCcccccchhhhCChHHHHHhccCeeeeccCCHHHHhcCcccCeEEeeCCcccHHHHHHcCCCEEeccccccc
Confidence 999999753211 112348899999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHH-HHHHhhceeEeecc----CCCccCHHHHHHHHHHHhcCh-HHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHH
Q 012212 383 YQNRNY-ICEAWKIGLQFFAD----ENGIITRQEIQRKVLTLLKND-DIRSNSLKLKEVARKSLLGGGSSFRNFESFISD 456 (468)
Q Consensus 383 ~~na~r-v~~~lG~g~~l~~~----~~~~~t~~~l~~ai~~~l~~~-~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~ 456 (468)
+.||++ +++ +|+|+.+... +++.++.++|+++|+++|.++ +||+||+++++++++++.+||||.+++++||++
T Consensus 391 ~~na~~~~~~-~g~g~~~~~~~~~~~~~~~~~~~l~~av~~~m~~~~~~r~~a~~~~~~~~~av~~gGsS~~~l~~~v~~ 469 (475)
T PLN02167 391 QLNAFTMVKE-LGLAVELRLDYVSAYGEIVKADEIAGAVRSLMDGEDVPRKKVKEIAEAARKAVMDGGSSFVAVKRFIDD 469 (475)
T ss_pred hhhHHHHHHH-hCeeEEeecccccccCCcccHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Confidence 999976 566 7999998642 123479999999999999765 799999999999999999999999999999999
Q ss_pred HHh
Q 012212 457 IKM 459 (468)
Q Consensus 457 ~~~ 459 (468)
++.
T Consensus 470 i~~ 472 (475)
T PLN02167 470 LLG 472 (475)
T ss_pred HHh
Confidence 875
|
|
| >PLN02764 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-60 Score=455.49 Aligned_cols=423 Identities=26% Similarity=0.423 Sum_probs=315.5
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcC--CCCCCCcCCCC-
Q 012212 3 RQPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIP--DGLELQAADRE- 79 (468)
Q Consensus 3 ~~~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~- 79 (468)
.++||+++|+++.||++|++.||+.|+.+|+.|||++++.+...+... ... .....+.+..+| ++++.......
T Consensus 4 ~~~Hvvl~P~paqGHi~P~l~LAk~La~~g~~vT~~tt~~~~~~~~~~--~~~-~~~~~v~~~~~p~~~glp~g~e~~~~ 80 (453)
T PLN02764 4 LKFHVLMYPWFATGHMTPFLFLANKLAEKGHTVTFLLPKKALKQLEHL--NLF-PHNIVFRSVTVPHVDGLPVGTETVSE 80 (453)
T ss_pred CCcEEEEECCcccccHHHHHHHHHHHHhCCCEEEEEeCcchhhhhccc--ccC-CCCceEEEEECCCcCCCCCccccccc
Confidence 468999999999999999999999999999999999999876655431 100 001237777777 55544311111
Q ss_pred ---CHHHHHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCcccHHHHHHHhCCceEEEcccchHHHHHHhhhhhHh
Q 012212 80 ---DPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVGSALEVAESMGIARAAVVPFGPGSLALSLQFPKLL 156 (468)
Q Consensus 80 ---~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~ 156 (468)
.....+....+.+.+.++++++. .+||+||+|+ ..|+..+|+.+|||.+.++++++........ +
T Consensus 81 ~~~~~~~~~~~a~~~~~~~~~~~l~~-------~~~~~iV~D~-~~w~~~vA~~~gIP~~~f~~~~a~~~~~~~~-~--- 148 (453)
T PLN02764 81 IPVTSADLLMSAMDLTRDQVEVVVRA-------VEPDLIFFDF-AHWIPEVARDFGLKTVKYVVVSASTIASMLV-P--- 148 (453)
T ss_pred CChhHHHHHHHHHHHhHHHHHHHHHh-------CCCCEEEECC-chhHHHHHHHhCCCEEEEEcHHHHHHHHHhc-c---
Confidence 11122223333455667777665 3589999995 7799999999999999999999877666542 1
Q ss_pred hcCCCCCCCcccccCCcccccCCCcc----CcccccCcCCCC-CC-hhHHHHHHHHHHHHHhhccccEEEEcCcccCChh
Q 012212 157 EAGIIDPNGFAILNDGLISLSDEIPA----WKRNEYTWSFPD-EP-SEQKILLGIICAVIQAVKISNWIINNSVYELDSP 230 (468)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~ 230 (468)
.+..+ ...|+++. ++..+++. +.. .. ...........+..+.+..++.+++||+.+||..
T Consensus 149 -~~~~~------------~~~pglp~~~v~l~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~s~~vlvNTf~eLE~~ 214 (453)
T PLN02764 149 -GGELG------------VPPPGYPSSKVLLRKQDAYT-MKNLEPTNTIDVGPNLLERVTTSLMNSDVIAIRTAREIEGN 214 (453)
T ss_pred -cccCC------------CCCCCCCCCcccCcHhhCcc-hhhcCCCccchhHHHHHHHHHHhhccCCEEEEeccHHhhHH
Confidence 01100 01244442 33333332 111 01 0111122223333355678899999999999987
Q ss_pred hhccC-----CCceeeccccCCCCCCCCCCCCCCCCCchhhhhhcccCccEEEEEecccccCCHHHHHHHHHHHHhCCCC
Q 012212 231 ACDLI-----PNILPIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALGLESLQKP 305 (468)
Q Consensus 231 ~~~~~-----p~v~~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~a~~~~~~~ 305 (468)
..+.. ++++.|||++...... ...+.++.+||+.+++++||||+|||....+.+++.+++.+|+..+.+
T Consensus 215 ~~~~~~~~~~~~v~~VGPL~~~~~~~------~~~~~~cl~WLD~q~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~p 288 (453)
T PLN02764 215 FCDYIEKHCRKKVLLTGPVFPEPDKT------RELEERWVKWLSGYEPDSVVFCALGSQVILEKDQFQELCLGMELTGSP 288 (453)
T ss_pred HHHHHHhhcCCcEEEeccCccCcccc------ccchhHHHHHHhCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCC
Confidence 65443 5799999997543111 113567999999999999999999999888999999999999999999
Q ss_pred EEEEEcCCCCC-CcccCCchhHHHHhCCCceEE-cccChHHHhcCCCCCceeeccCchhHHHhhhcCCceeccccccchh
Q 012212 306 FLWVIRQDFMN-GSRAKFPDGFIERVSNRGKIV-EWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQY 383 (468)
Q Consensus 306 ~l~~~~~~~~~-~~~~~~~~~~~~~~~~nv~~~-~~~p~~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~~~DQ~ 383 (468)
|+|++...... +....+|++|++++.++..++ +|+||.+||+|+++++||||||+||++||+++|||||++|++.||+
T Consensus 289 flwv~r~~~~~~~~~~~lp~~f~~r~~grG~v~~~W~PQ~~vL~h~~v~~FvtH~G~nS~~Eal~~GVP~l~~P~~~DQ~ 368 (453)
T PLN02764 289 FLVAVKPPRGSSTIQEALPEGFEERVKGRGVVWGGWVQQPLILSHPSVGCFVSHCGFGSMWESLLSDCQIVLVPQLGDQV 368 (453)
T ss_pred eEEEEeCCCCCcchhhhCCcchHhhhccCCcEEeCCCCHHHHhcCcccCeEEecCCchHHHHHHHcCCCEEeCCcccchH
Confidence 99999853211 123468999999988777766 9999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHhhceeEeeccCCCccCHHHHHHHHHHHhcChH-----HHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHH
Q 012212 384 QNRNYICEAWKIGLQFFADENGIITRQEIQRKVLTLLKNDD-----IRSNSLKLKEVARKSLLGGGSSFRNFESFISDIK 458 (468)
Q Consensus 384 ~na~rv~~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~~~-----~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 458 (468)
.||+++++.+|+|+.+..++.+.++.++|+++|+++|++++ +|++++++++.+++ +|||.+++++||++++
T Consensus 369 ~na~~l~~~~g~gv~~~~~~~~~~~~e~i~~av~~vm~~~~~~g~~~r~~a~~~~~~~~~----~GSS~~~l~~lv~~~~ 444 (453)
T PLN02764 369 LNTRLLSDELKVSVEVAREETGWFSKESLRDAINSVMKRDSEIGNLVKKNHTKWRETLAS----PGLLTGYVDNFIESLQ 444 (453)
T ss_pred HHHHHHHHHhceEEEeccccCCccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHh----cCCHHHHHHHHHHHHH
Confidence 99999965479999885432234899999999999998742 99999999999976 8999999999999999
Q ss_pred hhcccC
Q 012212 459 MLISGC 464 (468)
Q Consensus 459 ~~~~~~ 464 (468)
+..+++
T Consensus 445 ~~~~~~ 450 (453)
T PLN02764 445 DLVSGT 450 (453)
T ss_pred Hhcccc
Confidence 988765
|
|
| >PLN02534 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-59 Score=458.07 Aligned_cols=442 Identities=29% Similarity=0.486 Sum_probs=320.4
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcC-----CCCCCCc
Q 012212 1 MSRQPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIP-----DGLELQA 75 (468)
Q Consensus 1 m~~~~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~-----~~~~~~~ 75 (468)
|.++.||+++|+++.||++|++.||+.|+.+|+.|||++++.+...+........ .....++|+.+| ++++...
T Consensus 5 ~~~~~Hvv~vPfpaqGHi~P~l~LAk~La~~G~~vT~v~t~~n~~~~~~~~~~~~-~~~~~i~~~~lp~p~~~dglp~~~ 83 (491)
T PLN02534 5 KAKQLHFVLIPLMAQGHMIPMIDMARLLAERGVIVSLVTTPQNASRFAKTIDRAR-ESGLPIRLVQIPFPCKEVGLPIGC 83 (491)
T ss_pred cCCCCEEEEECCCCcchHHHHHHHHHHHHhCCCeEEEEECCCcHHHHhhhhhhcc-ccCCCeEEEEcCCCCccCCCCCCc
Confidence 5567899999999999999999999999999999999999988766654321110 111248999988 4665432
Q ss_pred CCCCC--HHHHHHHH---HHHhhHHHHHHHHHHhhCCCCCCceEEEecCCcccHHHHHHHhCCceEEEcccchHHHHHHh
Q 012212 76 ADRED--PLKLGESV---ARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVGSALEVAESMGIARAAVVPFGPGSLALSL 150 (468)
Q Consensus 76 ~~~~~--~~~~~~~~---~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~ 150 (468)
....+ ...+...+ ...+.+.++++++.. . .+||+||+|.+..|+..+|+.+|||.+.+++++++......
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~lL~~~---~--~pp~cIV~D~f~~Wa~dVA~~lgIP~v~F~t~~a~~~~~~~ 158 (491)
T PLN02534 84 ENLDTLPSRDLLRKFYDAVDKLQQPLERFLEQA---K--PPPSCIISDKCLSWTSKTAQRFNIPRIVFHGMCCFSLLSSH 158 (491)
T ss_pred cccccCCcHHHHHHHHHHHHHhHHHHHHHHHhc---C--CCCcEEEECCccHHHHHHHHHhCCCeEEEecchHHHHHHHH
Confidence 11111 11233322 233455666666542 1 46899999999999999999999999999999888776544
Q ss_pred hhhhHhhcCCCCCCCcccccCCcccccCCCcc---CcccccCcCCCCCChhHHHHHHHHHHHHHh-hccccEEEEcCccc
Q 012212 151 QFPKLLEAGIIDPNGFAILNDGLISLSDEIPA---WKRNEYTWSFPDEPSEQKILLGIICAVIQA-VKISNWIINNSVYE 226 (468)
Q Consensus 151 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~ 226 (468)
.+.........+ .......+|+++. +...+++..+... .. ...+...+.. ...++.+++||+.+
T Consensus 159 ~~~~~~~~~~~~-------~~~~~~~iPg~p~~~~l~~~dlp~~~~~~-~~----~~~~~~~~~~~~~~a~~vlvNTf~e 226 (491)
T PLN02534 159 NIRLHNAHLSVS-------SDSEPFVVPGMPQSIEITRAQLPGAFVSL-PD----LDDVRNKMREAESTAFGVVVNSFNE 226 (491)
T ss_pred HHHHhcccccCC-------CCCceeecCCCCccccccHHHCChhhcCc-cc----HHHHHHHHHhhcccCCEEEEecHHH
Confidence 321111111011 0111223566653 4555555211111 11 1222222232 23577999999999
Q ss_pred CChhhhcc-----CCCceeeccccCCCCCCCCC---CCCCC-CCCchhhhhhcccCccEEEEEecccccCCHHHHHHHHH
Q 012212 227 LDSPACDL-----IPNILPIGPLLASNHSGDLD---GNFWS-EDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELAL 297 (468)
Q Consensus 227 le~~~~~~-----~p~v~~vGpl~~~~~~~~~~---~~~~~-~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~ 297 (468)
||....+. .++++.|||++.......+. +..+. .+.++.+||+.+++++||||+|||.....++++.+++.
T Consensus 227 LE~~~l~~l~~~~~~~v~~VGPL~~~~~~~~~~~~~~~~~~~~~~~cl~wLd~~~~~sVvyvsfGS~~~~~~~q~~e~a~ 306 (491)
T PLN02534 227 LEHGCAEAYEKAIKKKVWCVGPVSLCNKRNLDKFERGNKASIDETQCLEWLDSMKPRSVIYACLGSLCRLVPSQLIELGL 306 (491)
T ss_pred hhHHHHHHHHhhcCCcEEEECcccccccccccccccCCccccchHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHH
Confidence 99865432 35799999997532111000 11111 23569999999998899999999998899999999999
Q ss_pred HHHhCCCCEEEEEcCCCC-CCc-ccCCchhHHHHh-CCCceEEcccChHHHhcCCCCCceeeccCchhHHHhhhcCCcee
Q 012212 298 GLESLQKPFLWVIRQDFM-NGS-RAKFPDGFIERV-SNRGKIVEWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFL 374 (468)
Q Consensus 298 a~~~~~~~~l~~~~~~~~-~~~-~~~~~~~~~~~~-~~nv~~~~~~p~~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v 374 (468)
+|+.++.+|+|++..... .+. ...+|++|.+++ ..++++.+|+||.+||+|+++++||||||+||++||+++|||||
T Consensus 307 gl~~~~~~flW~~r~~~~~~~~~~~~~p~gf~~~~~~~g~~v~~w~pq~~iL~h~~v~~fvtH~G~ns~~ea~~~GvP~v 386 (491)
T PLN02534 307 GLEASKKPFIWVIKTGEKHSELEEWLVKENFEERIKGRGLLIKGWAPQVLILSHPAIGGFLTHCGWNSTIEGICSGVPMI 386 (491)
T ss_pred HHHhCCCCEEEEEecCccccchhhhcCchhhHHhhccCCeeccCCCCHHHHhcCCccceEEecCccHHHHHHHHcCCCEE
Confidence 999999999999984311 111 113678898886 45666679999999999999999999999999999999999999
Q ss_pred ccccccchhhhHHHHHHHhhceeEeecc-------CC--C-ccCHHHHHHHHHHHhc-----ChHHHHHHHHHHHHHHHH
Q 012212 375 CWPYFSDQYQNRNYICEAWKIGLQFFAD-------EN--G-IITRQEIQRKVLTLLK-----NDDIRSNSLKLKEVARKS 439 (468)
Q Consensus 375 ~~P~~~DQ~~na~rv~~~lG~g~~l~~~-------~~--~-~~t~~~l~~ai~~~l~-----~~~~r~~a~~l~~~~~~~ 439 (468)
++|++.||+.||+++++.||+|+.+... ++ + ..+.++|+++|+++|. ..++|+||++|+++.+++
T Consensus 387 ~~P~~~dq~~na~~~~e~~~vGv~~~~~~~~~~~~~~~~~~~v~~eev~~~v~~~m~~~~eeg~~~R~rA~elk~~a~~A 466 (491)
T PLN02534 387 TWPLFAEQFLNEKLIVEVLRIGVRVGVEVPVRWGDEERVGVLVKKDEVEKAVKTLMDDGGEEGERRRRRAQELGVMARKA 466 (491)
T ss_pred eccccccHHHHHHHHHHhhcceEEecccccccccccccccCccCHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998768999988521 11 2 4899999999999996 246999999999999999
Q ss_pred hcCCCchHHHHHHHHHHHHhh
Q 012212 440 LLGGGSSFRNFESFISDIKML 460 (468)
Q Consensus 440 ~~~~g~~~~~~~~~~~~~~~~ 460 (468)
+.+||||.+++++||+++...
T Consensus 467 v~~GGSS~~nl~~fv~~i~~~ 487 (491)
T PLN02534 467 MELGGSSHINLSILIQDVLKQ 487 (491)
T ss_pred hcCCCcHHHHHHHHHHHHHHH
Confidence 999999999999999999753
|
|
| >PLN03015 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-59 Score=453.12 Aligned_cols=434 Identities=25% Similarity=0.422 Sum_probs=325.7
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHHC-CCEEEEEECCcchHHHH-HhhhhhccCCCCCeEEEEcCCCCCCCc-CCCC
Q 012212 3 RQPHVLVIPYPAQGHVAPLMKLATKIAER-AIKVTVVNTQFIHKKII-ASLQEKAEDSSSQIKLVTIPDGLELQA-ADRE 79 (468)
Q Consensus 3 ~~~~Il~~~~~~~GH~~p~~~LA~~L~~r-GH~Vt~~~~~~~~~~i~-~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~ 79 (468)
.+.||+++|+|++||++|++.||+.|+.+ |..|||++++.+...+. +...... .....+++..+|......- ....
T Consensus 2 ~~pHvvl~P~p~qGHi~P~l~LAk~La~~~g~~vT~v~t~~~~~~~~~~~~~~~~-~~~~~i~~~~lp~~~~~~l~~~~~ 80 (470)
T PLN03015 2 DQPHALLVASPGLGHLIPILELGNRLSSVLNIHVTILAVTSGSSSPTETEAIHAA-AARTTCQITEIPSVDVDNLVEPDA 80 (470)
T ss_pred CCcEEEEECCcccccHHHHHHHHHHHHhCCCCeEEEEECCCchhhhccccccccc-cCCCceEEEECCCCccccCCCCCc
Confidence 45799999999999999999999999987 99999999887654431 1111100 0112599999985432210 0011
Q ss_pred CHHHHHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCcccHHHHHHHhCCc-eEEEcccchHHHHHHhhhhhHhhc
Q 012212 80 DPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVGSALEVAESMGIA-RAAVVPFGPGSLALSLQFPKLLEA 158 (468)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~lgiP-~v~~~~~~~~~~~~~~~~p~~~~~ 158 (468)
+....+..+...+.+.++++++.+. .+|++||+|.+..|+..+|+.+||| .++++++++.......++|....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~l~-----~~~~ciV~D~f~~w~~~vA~~lgIP~~~~f~~~~a~~~~~~~~l~~~~~- 154 (470)
T PLN03015 81 TIFTKMVVKMRAMKPAVRDAVKSMK-----RKPTVMIVDFFGTALMSIADDVGVTAKYVYIPSHAWFLAVMVYLPVLDT- 154 (470)
T ss_pred cHHHHHHHHHHhchHHHHHHHHhcC-----CCCeEEEEcCCcHHHHHHHHHcCCCEEEEEcCHHHHHHHHHHhhhhhhc-
Confidence 3332333344567777888887653 3589999999999999999999999 58888888777666666554321
Q ss_pred CCCCCCCcccccCCcccccCCCccCcccccCcCCCCCChhHHHHHHHHHHHHHhhccccEEEEcCcccCChhhhccC---
Q 012212 159 GIIDPNGFAILNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACDLI--- 235 (468)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~~~~~--- 235 (468)
.... ... .. .....+|+++.+...+++. .+..+.. ..+..+.+..+....++.+++||+.+||....+..
T Consensus 155 -~~~~-~~~-~~-~~~~~vPg~p~l~~~dlp~-~~~~~~~--~~~~~~~~~~~~~~~a~gvlvNTf~eLE~~~~~~l~~~ 227 (470)
T PLN03015 155 -VVEG-EYV-DI-KEPLKIPGCKPVGPKELME-TMLDRSD--QQYKECVRSGLEVPMSDGVLVNTWEELQGNTLAALRED 227 (470)
T ss_pred -cccc-ccC-CC-CCeeeCCCCCCCChHHCCH-hhcCCCc--HHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHHhh
Confidence 1110 000 00 1123478888888887773 2222211 11233334445577899999999999998654322
Q ss_pred --------CCceeeccccCCCCCCCCCCCCCCCCCchhhhhhcccCccEEEEEecccccCCHHHHHHHHHHHHhCCCCEE
Q 012212 236 --------PNILPIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALGLESLQKPFL 307 (468)
Q Consensus 236 --------p~v~~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~l 307 (468)
+.++.|||++.... . ...+.++.+||+.+++++||||+|||...++.+++++++.+|+.++++|+
T Consensus 228 ~~~~~~~~~~v~~VGPl~~~~~-~------~~~~~~~~~WLd~~~~~sVvyvsFGS~~~~~~~q~~ela~gl~~s~~~Fl 300 (470)
T PLN03015 228 MELNRVMKVPVYPIGPIVRTNV-H------VEKRNSIFEWLDKQGERSVVYVCLGSGGTLTFEQTVELAWGLELSGQRFV 300 (470)
T ss_pred cccccccCCceEEecCCCCCcc-c------ccchHHHHHHHHhCCCCCEEEEECCcCCcCCHHHHHHHHHHHHhCCCcEE
Confidence 56999999985321 1 11234799999999888999999999999999999999999999999999
Q ss_pred EEEcCCCC--------CC-cccCCchhHHHHhCCCceEE-cccChHHHhcCCCCCceeeccCchhHHHhhhcCCceeccc
Q 012212 308 WVIRQDFM--------NG-SRAKFPDGFIERVSNRGKIV-EWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWP 377 (468)
Q Consensus 308 ~~~~~~~~--------~~-~~~~~~~~~~~~~~~nv~~~-~~~p~~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P 377 (468)
|++..... .+ ....+|+++.+++.++..++ +|+||.+||+|+++++||||||+||++||+++|||||++|
T Consensus 301 Wv~r~~~~~~~~~~~~~~~~~~~lp~~f~er~~~rGl~v~~W~PQ~~vL~h~~vg~fvtH~GwnS~~Eai~~GvP~v~~P 380 (470)
T PLN03015 301 WVLRRPASYLGASSSDDDQVSASLPEGFLDRTRGVGLVVTQWAPQVEILSHRSIGGFLSHCGWSSVLESLTKGVPIVAWP 380 (470)
T ss_pred EEEecCccccccccccccchhhcCChHHHHhhccCceEEEecCCHHHHhccCccCeEEecCCchhHHHHHHcCCCEEecc
Confidence 99974211 11 12258899999998887665 9999999999999999999999999999999999999999
Q ss_pred cccchhhhHHHHHHHhhceeEeec-cCCCccCHHHHHHHHHHHhc-----ChHHHHHHHHHHHHHHHHhcCCCchHHHHH
Q 012212 378 YFSDQYQNRNYICEAWKIGLQFFA-DENGIITRQEIQRKVLTLLK-----NDDIRSNSLKLKEVARKSLLGGGSSFRNFE 451 (468)
Q Consensus 378 ~~~DQ~~na~rv~~~lG~g~~l~~-~~~~~~t~~~l~~ai~~~l~-----~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~ 451 (468)
+++||+.||+++++.||+|+.+.. ...+.++.++|+++|+++|. ..++|+||++|+++.++++.+||||.++++
T Consensus 381 ~~~DQ~~na~~~~~~~gvg~~~~~~~~~~~v~~e~i~~~v~~lm~~~~eeg~~~R~ra~~lk~~a~~Av~eGGSS~~nl~ 460 (470)
T PLN03015 381 LYAEQWMNATLLTEEIGVAVRTSELPSEKVIGREEVASLVRKIVAEEDEEGQKIRAKAEEVRVSSERAWSHGGSSYNSLF 460 (470)
T ss_pred cccchHHHHHHHHHHhCeeEEecccccCCccCHHHHHHHHHHHHccCcccHHHHHHHHHHHHHHHHHHhcCCCcHHHHHH
Confidence 999999999998554899999962 12345999999999999994 245999999999999999999999999999
Q ss_pred HHHHHH
Q 012212 452 SFISDI 457 (468)
Q Consensus 452 ~~~~~~ 457 (468)
+|+..+
T Consensus 461 ~~~~~~ 466 (470)
T PLN03015 461 EWAKRC 466 (470)
T ss_pred HHHHhc
Confidence 999875
|
|
| >PLN00414 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-59 Score=455.73 Aligned_cols=418 Identities=24% Similarity=0.412 Sum_probs=307.0
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcC----CCCCCCcC
Q 012212 1 MSRQPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIP----DGLELQAA 76 (468)
Q Consensus 1 m~~~~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~----~~~~~~~~ 76 (468)
|..+.||+++|+|+.||++|++.||+.|+++|++|||++++.+...+...+. ....++|..++ ++++....
T Consensus 1 ~~~~~HVvlvPfpaqGHi~PmL~LAk~Las~G~~VT~vtt~~~~~~i~~~~~-----~~~~i~~~~i~lP~~dGLP~g~e 75 (446)
T PLN00414 1 MGSKFHAFMYPWFGFGHMIPYLHLANKLAEKGHRVTFFLPKKAHKQLQPLNL-----FPDSIVFEPLTLPPVDGLPFGAE 75 (446)
T ss_pred CCCCCEEEEecCcccchHHHHHHHHHHHHhCCCEEEEEeCCchhhhhccccc-----CCCceEEEEecCCCcCCCCCccc
Confidence 7778999999999999999999999999999999999999988766654321 11247775543 45544321
Q ss_pred CCCCHH-HHHHHHHH---HhhHHHHHHHHHHhhCCCCCCceEEEecCCcccHHHHHHHhCCceEEEcccchHHHHHHhhh
Q 012212 77 DREDPL-KLGESVAR---AMRGCLRDLIEKINQSNDCEPIRCVIADVTVGSALEVAESMGIARAAVVPFGPGSLALSLQF 152 (468)
Q Consensus 77 ~~~~~~-~~~~~~~~---~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~ 152 (468)
...++. .....+.. .+.+.++++++. .+||+||+|. ..|+..+|+.+|||++.++++++.......+
T Consensus 76 ~~~~l~~~~~~~~~~a~~~l~~~l~~~L~~-------~~p~cVV~D~-~~wa~~vA~~lgIP~~~F~~~~a~~~~~~~~- 146 (446)
T PLN00414 76 TASDLPNSTKKPIFDAMDLLRDQIEAKVRA-------LKPDLIFFDF-VHWVPEMAKEFGIKSVNYQIISAACVAMVLA- 146 (446)
T ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHhc-------CCCeEEEECC-chhHHHHHHHhCCCEEEEecHHHHHHHHHhC-
Confidence 111111 11112222 333334443332 4689999995 7899999999999999999999987776654
Q ss_pred hhHhhcCCCCCCCcccccCCcccccCCCcc----CcccccCc-CCCCCChhHHHHHHHHHHHHHhhccccEEEEcCcccC
Q 012212 153 PKLLEAGIIDPNGFAILNDGLISLSDEIPA----WKRNEYTW-SFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYEL 227 (468)
Q Consensus 153 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 227 (468)
+.. ..+ . ..|+++. ++..+... .+.. . ....+.+..+...+++.+++||+.+|
T Consensus 147 ~~~-~~~------~---------~~pg~p~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~vlvNTf~eL 204 (446)
T PLN00414 147 PRA-ELG------F---------PPPDYPLSKVALRGHDANVCSLFA-N-----SHELFGLITKGLKNCDVVSIRTCVEL 204 (446)
T ss_pred cHh-hcC------C---------CCCCCCCCcCcCchhhcccchhhc-c-----cHHHHHHHHHhhccCCEEEEechHHH
Confidence 110 000 0 1133331 11111110 1111 0 11233344456678999999999999
Q ss_pred ChhhhccC-----CCceeeccccCCCCCCCCCCCCCCCCCchhhhhhcccCccEEEEEecccccCCHHHHHHHHHHHHhC
Q 012212 228 DSPACDLI-----PNILPIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALGLESL 302 (468)
Q Consensus 228 e~~~~~~~-----p~v~~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~a~~~~ 302 (468)
|....+.. ++++.|||++....... . ...+.++.+|||.+++++||||+|||....+.+++.+++.+|+..
T Consensus 205 E~~~~~~~~~~~~~~v~~VGPl~~~~~~~~--~--~~~~~~~~~WLD~q~~~sVvyvsfGS~~~~~~~q~~e~a~gL~~s 280 (446)
T PLN00414 205 EGNLCDFIERQCQRKVLLTGPMLPEPQNKS--G--KPLEDRWNHWLNGFEPGSVVFCAFGTQFFFEKDQFQEFCLGMELT 280 (446)
T ss_pred HHHHHHHHHHhcCCCeEEEcccCCCccccc--C--cccHHHHHHHHhcCCCCceEEEeecccccCCHHHHHHHHHHHHHc
Confidence 98765433 46999999975432110 1 112356899999999999999999999999999999999999999
Q ss_pred CCCEEEEEcCCCCC-CcccCCchhHHHHhCCCceEE-cccChHHHhcCCCCCceeeccCchhHHHhhhcCCceecccccc
Q 012212 303 QKPFLWVIRQDFMN-GSRAKFPDGFIERVSNRGKIV-EWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFS 380 (468)
Q Consensus 303 ~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~nv~~~-~~~p~~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~~~ 380 (468)
+.+|+|++...... +....+|++|++++.++..++ +|+||.+||+|+++++||||||+||++||+++|||||++|++.
T Consensus 281 ~~~Flwvvr~~~~~~~~~~~lp~~f~~r~~~~g~vv~~w~PQ~~vL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~ 360 (446)
T PLN00414 281 GLPFLIAVMPPKGSSTVQEALPEGFEERVKGRGIVWEGWVEQPLILSHPSVGCFVNHCGFGSMWESLVSDCQIVFIPQLA 360 (446)
T ss_pred CCCeEEEEecCCCcccchhhCChhHHHHhcCCCeEEeccCCHHHHhcCCccceEEecCchhHHHHHHHcCCCEEecCccc
Confidence 99999999753211 122368999999999888887 9999999999999999999999999999999999999999999
Q ss_pred chhhhHHHHHHHhhceeEeeccCCCccCHHHHHHHHHHHhcChH-----HHHHHHHHHHHHHHHhcCCCchHHHHHHHHH
Q 012212 381 DQYQNRNYICEAWKIGLQFFADENGIITRQEIQRKVLTLLKNDD-----IRSNSLKLKEVARKSLLGGGSSFRNFESFIS 455 (468)
Q Consensus 381 DQ~~na~rv~~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~~~-----~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 455 (468)
||+.||+++++.+|+|+.+..++++.++.++|+++++++|.|++ +|++++++++.+.+ +||++ ..+++||+
T Consensus 361 dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~i~~~v~~~m~~~~e~g~~~r~~a~~~~~~~~~---~gg~s-s~l~~~v~ 436 (446)
T PLN00414 361 DQVLITRLLTEELEVSVKVQREDSGWFSKESLRDTVKSVMDKDSEIGNLVKRNHKKLKETLVS---PGLLS-GYADKFVE 436 (446)
T ss_pred chHHHHHHHHHHhCeEEEeccccCCccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHc---CCCcH-HHHHHHHH
Confidence 99999999964379999997543345899999999999997643 99999999999855 36634 44899999
Q ss_pred HHHhhcc
Q 012212 456 DIKMLIS 462 (468)
Q Consensus 456 ~~~~~~~ 462 (468)
++++...
T Consensus 437 ~~~~~~~ 443 (446)
T PLN00414 437 ALENEVN 443 (446)
T ss_pred HHHHhcc
Confidence 9976543
|
|
| >PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-52 Score=413.28 Aligned_cols=394 Identities=18% Similarity=0.204 Sum_probs=270.1
Q ss_pred CCEEEEE-cCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCCCCCCCcC--CCC-
Q 012212 4 QPHVLVI-PYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDGLELQAA--DRE- 79 (468)
Q Consensus 4 ~~~Il~~-~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~--~~~- 79 (468)
..||+++ |.++.||+..+.+|+++|++|||+||++++...... .. ....+++.+.++...+.... ...
T Consensus 20 ~~kIl~~~P~~~~SH~~~~~~l~~~La~rGH~VTvi~p~~~~~~-~~-------~~~~~~~~i~~~~~~~~~~~~~~~~~ 91 (507)
T PHA03392 20 AARILAVFPTPAYSHHSVFKVYVEALAERGHNVTVIKPTLRVYY-AS-------HLCGNITEIDASLSVEYFKKLVKSSA 91 (507)
T ss_pred cccEEEEcCCCCCcHHHHHHHHHHHHHHcCCeEEEEeccccccc-cc-------CCCCCEEEEEcCCChHHHHHHHhhhh
Confidence 4689855 888999999999999999999999999987542111 00 01145665555311111000 000
Q ss_pred ---------CHHHH----HHHHHHHhhHHH--HHHHHHHhhCCCCCCceEEEecCCcccHHHHHHHh-CCceEEEcccch
Q 012212 80 ---------DPLKL----GESVARAMRGCL--RDLIEKINQSNDCEPIRCVIADVTVGSALEVAESM-GIARAAVVPFGP 143 (468)
Q Consensus 80 ---------~~~~~----~~~~~~~~~~~~--~~ll~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~l-giP~v~~~~~~~ 143 (468)
+.... ...+...+...+ .++.+.|++ ++.+||+||+|.+..|+..+|+.+ ++|.|.++++..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~--~~~kFDlvi~e~~~~c~~~la~~~~~~p~i~~ss~~~ 169 (507)
T PHA03392 92 VFRKRGVVADSSTVTADNYMGLVRMISDQFDLPNVKNLIAN--KNNKFDLLVTEAFLDYPLVFSHLFGDAPVIQISSGYG 169 (507)
T ss_pred HHHhhhhhhhHHHHHHHHHHHHHHHHHHHHCCHHHHHHHhc--CCCceeEEEecccchhHHHHHHHhCCCCEEEEcCCCC
Confidence 00011 111112222222 122333331 126799999999888999999999 999988887655
Q ss_pred HHHHHH-----hhhhhHhh---cCCCCCCCcccccCCcccccCCCccCcccccCcCCCCCChhHHHHHHHH-H----HHH
Q 012212 144 GSLALS-----LQFPKLLE---AGIIDPNGFAILNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGII-C----AVI 210 (468)
Q Consensus 144 ~~~~~~-----~~~p~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~ 210 (468)
...... +..|++.+ .+..+.|++. ++..++.... +....+.... +. .....+.. . ...
T Consensus 170 ~~~~~~~~gg~p~~~syvP~~~~~~~~~Msf~-~R~~N~~~~~------~~~~~~~~~~-~~-~~~l~~~~f~~~~~~~~ 240 (507)
T PHA03392 170 LAENFETMGAVSRHPVYYPNLWRSKFGNLNVW-ETINEIYTEL------RLYNEFSLLA-DE-QNKLLKQQFGPDTPTIR 240 (507)
T ss_pred chhHHHhhccCCCCCeeeCCcccCCCCCCCHH-HHHHHHHHHH------HHHHHHHHhh-HH-HHHHHHHHcCCCCCCHH
Confidence 322111 11112211 1222223332 2221111000 0000000001 11 11111111 1 122
Q ss_pred HhhccccEEEEcCcccCChhhhccCCCceeeccccCCCCCCCCCCCCCCCCCchhhhhhcccCccEEEEEecccc---cC
Q 012212 211 QAVKISNWIINNSVYELDSPACDLIPNILPIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVA---VL 287 (468)
Q Consensus 211 ~~~~~~~~~l~~~~~~le~~~~~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~---~~ 287 (468)
+-....+++|+|+++.++++ +|++|++.+|||++.+.... .+.++++.+|++..+ +++|||||||.. ..
T Consensus 241 ~l~~~~~l~lvns~~~~d~~-rp~~p~v~~vGgi~~~~~~~------~~l~~~l~~fl~~~~-~g~V~vS~GS~~~~~~~ 312 (507)
T PHA03392 241 ELRNRVQLLFVNVHPVFDNN-RPVPPSVQYLGGLHLHKKPP------QPLDDYLEEFLNNST-NGVVYVSFGSSIDTNDM 312 (507)
T ss_pred HHHhCCcEEEEecCccccCC-CCCCCCeeeecccccCCCCC------CCCCHHHHHHHhcCC-CcEEEEECCCCCcCCCC
Confidence 33447799999999999998 89999999999998753211 247889999998764 469999999974 35
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEEcCCCCCCcccCCchhHHHHhCCCceEEcccChHHHhcCCCCCceeeccCchhHHHhh
Q 012212 288 SQQQFAELALGLESLQKPFLWVIRQDFMNGSRAKFPDGFIERVSNRGKIVEWAPQEKVLGHSSVACFISHCGWNSTMEGL 367 (468)
Q Consensus 288 ~~~~~~~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~I~hGG~~s~~eal 367 (468)
+.++++.+++++++++.+++|++++. ..+. ..++||++.+|+||.+||+||+|++||||||+||++||+
T Consensus 313 ~~~~~~~~l~a~~~l~~~viw~~~~~-------~~~~----~~p~Nv~i~~w~Pq~~lL~hp~v~~fItHGG~~s~~Eal 381 (507)
T PHA03392 313 DNEFLQMLLRTFKKLPYNVLWKYDGE-------VEAI----NLPANVLTQKWFPQRAVLKHKNVKAFVTQGGVQSTDEAI 381 (507)
T ss_pred CHHHHHHHHHHHHhCCCeEEEEECCC-------cCcc----cCCCceEEecCCCHHHHhcCCCCCEEEecCCcccHHHHH
Confidence 78999999999999999999999854 1111 237899999999999999999999999999999999999
Q ss_pred hcCCceeccccccchhhhHHHHHHHhhceeEeeccCCCccCHHHHHHHHHHHhcChHHHHHHHHHHHHHHHH
Q 012212 368 SMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGIITRQEIQRKVLTLLKNDDIRSNSLKLKEVARKS 439 (468)
Q Consensus 368 ~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~~~~r~~a~~l~~~~~~~ 439 (468)
++|||+|++|+++||+.||+|++++ |+|+.++..+ +|.++|.++|+++|+|++||+||+++++.+++.
T Consensus 382 ~~GvP~v~iP~~~DQ~~Na~rv~~~-G~G~~l~~~~---~t~~~l~~ai~~vl~~~~y~~~a~~ls~~~~~~ 449 (507)
T PHA03392 382 DALVPMVGLPMMGDQFYNTNKYVEL-GIGRALDTVT---VSAAQLVLAIVDVIENPKYRKNLKELRHLIRHQ 449 (507)
T ss_pred HcCCCEEECCCCccHHHHHHHHHHc-CcEEEeccCC---cCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999995 9999999887 999999999999999999999999999999983
|
|
| >PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-52 Score=422.99 Aligned_cols=392 Identities=25% Similarity=0.347 Sum_probs=230.0
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCCCCCCCcC--CCCCH-
Q 012212 5 PHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDGLELQAA--DREDP- 81 (468)
Q Consensus 5 ~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~--~~~~~- 81 (468)
.|||++|. ++||+.++..|+++|++|||+||++++.... .+.. ....++++..++........ ...+.
T Consensus 1 ~kvLv~p~-~~SH~~~~~~l~~~L~~rGH~VTvl~~~~~~-~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (500)
T PF00201_consen 1 GKVLVFPM-AYSHFIFMRPLAEELAERGHNVTVLTPSPSS-SLNP-------SKPSNIRFETYPDPYPEEEFEEIFPEFI 71 (500)
T ss_dssp ------------SHHHHHHHHHHHHHH-TTSEEEHHHHHH-T-------------S-CCEEEE-----TT------TTHH
T ss_pred CEEEEeCC-CcCHHHHHHHHHHHHHhcCCceEEEEeeccc-cccc-------ccccceeeEEEcCCcchHHHhhhhHHHH
Confidence 37888885 7899999999999999999999999885422 2221 11255677776654443321 11111
Q ss_pred HHHHH---------HHH-------HHhhHHH------HHHHHHHhhCCCCCCceEEEecCCcccHHHHHHHhCCceEEEc
Q 012212 82 LKLGE---------SVA-------RAMRGCL------RDLIEKINQSNDCEPIRCVIADVTVGSALEVAESMGIARAAVV 139 (468)
Q Consensus 82 ~~~~~---------~~~-------~~~~~~~------~~ll~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~lgiP~v~~~ 139 (468)
...+. ... ......+ .++++.+++ .++|++|+|.+..|+..+|+.+++|.+.+.
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~l~d~~l~~~l~~----~~fDlvI~d~f~~c~~~la~~l~iP~i~~~ 147 (500)
T PF00201_consen 72 SKFFSESSFANSFWEMFKMLNAFFDFFSKSCEDLLSDPELMEQLKS----EKFDLVISDAFDPCGLALAHYLGIPVIIIS 147 (500)
T ss_dssp HHHHHHHCCHHHHHHHHHHHHCHHHS----E--EEEETTSTTHHHH----HHHCT-EEEEEESSHHHHHHHHHHTHHHHH
T ss_pred HHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHh----hccccceEeeccchhHHHHHHhcCCeEEEe
Confidence 01111 000 0011111 112233333 459999999999999999999999998755
Q ss_pred ccchHHHHHH-----hhhhhHhhc---CCCCCCCcccccCCcccccCCCccCcccccCcCCCCCChhHHHHHHHHHHHHH
Q 012212 140 PFGPGSLALS-----LQFPKLLEA---GIIDPNGFAILNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQ 211 (468)
Q Consensus 140 ~~~~~~~~~~-----~~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (468)
+..+...... +..|++.+. ...+.|.+. ++..+....-....+ ....... .+.. .....+......+
T Consensus 148 s~~~~~~~~~~~~g~p~~psyvP~~~s~~~~~msf~-~Ri~N~l~~~~~~~~-~~~~~~~--~~~~-~~~~~~~~~~~~~ 222 (500)
T PF00201_consen 148 SSTPMYDLSSFSGGVPSPPSYVPSMFSDFSDRMSFW-QRIKNFLFYLYFRFI-FRYFFSP--QDKL-YKKYFGFPFSFRE 222 (500)
T ss_dssp HCCSCSCCTCCTSCCCTSTTSTTCBCCCSGTTSSSS-T--TTSHHHHHHHHH-HHHGGGS---TTS--EEESS-GGGCHH
T ss_pred cccccchhhhhccCCCCChHHhccccccCCCccchh-hhhhhhhhhhhhccc-cccchhh--HHHH-HhhhcccccccHH
Confidence 4322110000 000111110 111111111 111110000000000 0000000 0000 0000000001122
Q ss_pred hhccccEEEEcCcccCChhhhccCCCceeeccccCCCCCCCCCCCCCCCCCchhhhhhcccCccEEEEEecccc-cCCHH
Q 012212 212 AVKISNWIINNSVYELDSPACDLIPNILPIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVA-VLSQQ 290 (468)
Q Consensus 212 ~~~~~~~~l~~~~~~le~~~~~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~-~~~~~ 290 (468)
.+...+++++|+++.+++| +|.+|++.++|+++.+.+.+ .+.++.+|+++...+++|||||||.. .++.+
T Consensus 223 ~~~~~~l~l~ns~~~ld~p-rp~~p~v~~vGgl~~~~~~~--------l~~~~~~~~~~~~~~~vv~vsfGs~~~~~~~~ 293 (500)
T PF00201_consen 223 LLSNASLVLINSHPSLDFP-RPLLPNVVEVGGLHIKPAKP--------LPEELWNFLDSSGKKGVVYVSFGSIVSSMPEE 293 (500)
T ss_dssp HHHHHHHCCSSTEEE-----HHHHCTSTTGCGC-S----T--------CHHHHHHHTSTTTTTEEEEEE-TSSSTT-HHH
T ss_pred HHHHHHHHhhhccccCcCC-cchhhcccccCccccccccc--------cccccchhhhccCCCCEEEEecCcccchhHHH
Confidence 3346678999999999999 89999999999998876554 67889999998556679999999985 45566
Q ss_pred HHHHHHHHHHhCCCCEEEEEcCCCCCCcccCCchhHHHHhCCCceEEcccChHHHhcCCCCCceeeccCchhHHHhhhcC
Q 012212 291 QFAELALGLESLQKPFLWVIRQDFMNGSRAKFPDGFIERVSNRGKIVEWAPQEKVLGHSSVACFISHCGWNSTMEGLSMG 370 (468)
Q Consensus 291 ~~~~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~I~hGG~~s~~eal~~G 370 (468)
.++.+++++++++.+++|++.+. .+.. .++|+++++|+||.+||+||++++||||||+||++||+++|
T Consensus 294 ~~~~~~~~~~~~~~~~iW~~~~~--------~~~~----l~~n~~~~~W~PQ~~lL~hp~v~~fitHgG~~s~~Ea~~~g 361 (500)
T PF00201_consen 294 KLKEIAEAFENLPQRFIWKYEGE--------PPEN----LPKNVLIVKWLPQNDLLAHPRVKLFITHGGLNSTQEALYHG 361 (500)
T ss_dssp HHHHHHHHHHCSTTEEEEEETCS--------HGCH----HHTTEEEESS--HHHHHTSTTEEEEEES--HHHHHHHHHCT
T ss_pred HHHHHHHHHhhCCCccccccccc--------cccc----ccceEEEeccccchhhhhcccceeeeeccccchhhhhhhcc
Confidence 68899999999999999999854 1122 36899999999999999999999999999999999999999
Q ss_pred CceeccccccchhhhHHHHHHHhhceeEeeccCCCccCHHHHHHHHHHHhcChHHHHHHHHHHHHHHHH
Q 012212 371 VPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGIITRQEIQRKVLTLLKNDDIRSNSLKLKEVARKS 439 (468)
Q Consensus 371 vP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~~~~r~~a~~l~~~~~~~ 439 (468)
||+|++|+++||+.||++++++ |+|+.++..+ +|.++|.++|+++|+|++|++||+++++.+++.
T Consensus 362 vP~l~~P~~~DQ~~na~~~~~~-G~g~~l~~~~---~~~~~l~~ai~~vl~~~~y~~~a~~ls~~~~~~ 426 (500)
T PF00201_consen 362 VPMLGIPLFGDQPRNAARVEEK-GVGVVLDKND---LTEEELRAAIREVLENPSYKENAKRLSSLFRDR 426 (500)
T ss_dssp --EEE-GCSTTHHHHHHHHHHT-TSEEEEGGGC----SHHHHHHHHHHHHHSHHHHHHHHHHHHTTT--
T ss_pred CCccCCCCcccCCccceEEEEE-eeEEEEEecC---CcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcC
Confidence 9999999999999999999996 9999999988 999999999999999999999999999999984
|
This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A .... |
| >TIGR01426 MGT glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-45 Score=358.82 Aligned_cols=371 Identities=18% Similarity=0.281 Sum_probs=261.4
Q ss_pred cCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCCCCCCCcCC----CCCHHHHHH
Q 012212 11 PYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDGLELQAAD----REDPLKLGE 86 (468)
Q Consensus 11 ~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~----~~~~~~~~~ 86 (468)
.+|+.||++|+++||++|++|||+|+|++++.+.+.+.+ .++.|..++......... ..+....++
T Consensus 2 ~~p~~Ghv~P~l~lA~~L~~~Gh~V~~~~~~~~~~~v~~----------~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (392)
T TIGR01426 2 NIPAHGHVNPTLGVVEELVARGHRVTYATTEEFAERVEA----------AGAEFVLYGSALPPPDNPPENTEEEPIDIIE 71 (392)
T ss_pred CCCccccccccHHHHHHHHhCCCeEEEEeCHHHHHHHHH----------cCCEEEecCCcCccccccccccCcchHHHHH
Confidence 578999999999999999999999999999999999998 457787777554332111 123445555
Q ss_pred HHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCcccHHHHHHHhCCceEEEcccchHHHHHHhhhhhHhhcCCCCCCCc
Q 012212 87 SVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVGSALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGIIDPNGF 166 (468)
Q Consensus 87 ~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 166 (468)
.+.......++.+.+.+.. .+||+||+|.+++++..+|+.+|||+|.+.+.+..... +|.... +
T Consensus 72 ~~~~~~~~~~~~l~~~~~~----~~pDlVi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~----~~~~~~----~---- 135 (392)
T TIGR01426 72 KLLDEAEDVLPQLEEAYKG----DRPDLIVYDIASWTGRLLARKWDVPVISSFPTFAANEE----FEEMVS----P---- 135 (392)
T ss_pred HHHHHHHHHHHHHHHHhcC----CCCCEEEECCccHHHHHHHHHhCCCEEEEehhhccccc----cccccc----c----
Confidence 5555555555555544443 57999999998889999999999999988654321100 000000 0
Q ss_pred ccccCCcccccCCCccCcccccCcCCCCCChhHHHHHHHHHHHHH----------h--hccccEEEEcCcccCChhhhcc
Q 012212 167 AILNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQ----------A--VKISNWIINNSVYELDSPACDL 234 (468)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~--~~~~~~~l~~~~~~le~~~~~~ 234 (468)
.........+.. . . . ...+...+....+ . ....+..+..+.+.|+++..++
T Consensus 136 --~~~~~~~~~~~~--------~-~---~---~~~~~~~~~~~r~~~gl~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~ 198 (392)
T TIGR01426 136 --AGEGSAEEGAIA--------E-R---G---LAEYVARLSALLEEHGITTPPVEFLAAPRRDLNLVYTPKAFQPAGETF 198 (392)
T ss_pred --cchhhhhhhccc--------c-c---h---hHHHHHHHHHHHHHhCCCCCCHHHHhcCCcCcEEEeCChHhCCCcccc
Confidence 000000000000 0 0 0 0001111111111 1 1234456778888888765577
Q ss_pred CCCceeeccccCCCCCCCCCCCCCCCCCchhhhhhcccCccEEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEcCCC
Q 012212 235 IPNILPIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALGLESLQKPFLWVIRQDF 314 (468)
Q Consensus 235 ~p~v~~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~l~~~~~~~ 314 (468)
+++++++||+....... .+|.....++++||+|+||.......+++.+++++.+.+.++++..+...
T Consensus 199 ~~~~~~~Gp~~~~~~~~-------------~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~g~~~ 265 (392)
T TIGR01426 199 DDSFTFVGPCIGDRKED-------------GSWERPGDGRPVVLISLGTVFNNQPSFYRTCVEAFRDLDWHVVLSVGRGV 265 (392)
T ss_pred CCCeEEECCCCCCcccc-------------CCCCCCCCCCCEEEEecCccCCCCHHHHHHHHHHHhcCCCeEEEEECCCC
Confidence 88999999977653211 12555455678999999998655667889999999999999888876541
Q ss_pred CCCcccCCchhHHHHhCCCceEEcccChHHHhcCCCCCceeeccCchhHHHhhhcCCceeccccccchhhhHHHHHHHhh
Q 012212 315 MNGSRAKFPDGFIERVSNRGKIVEWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWK 394 (468)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG 394 (468)
+ ... ....++|+++.+|+||.++|.++++ +|||||+||+.||+++|+|+|++|...||+.||.++++ +|
T Consensus 266 ~-------~~~-~~~~~~~v~~~~~~p~~~ll~~~~~--~I~hgG~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~-~g 334 (392)
T TIGR01426 266 D-------PAD-LGELPPNVEVRQWVPQLEILKKADA--FITHGGMNSTMEALFNGVPMVAVPQGADQPMTARRIAE-LG 334 (392)
T ss_pred C-------hhH-hccCCCCeEEeCCCCHHHHHhhCCE--EEECCCchHHHHHHHhCCCEEecCCcccHHHHHHHHHH-CC
Confidence 1 111 1224688999999999999977655 99999999999999999999999999999999999999 59
Q ss_pred ceeEeeccCCCccCHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHH
Q 012212 395 IGLQFFADENGIITRQEIQRKVLTLLKNDDIRSNSLKLKEVARKSLLGGGSSFRNFESFIS 455 (468)
Q Consensus 395 ~g~~l~~~~~~~~t~~~l~~ai~~~l~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 455 (468)
+|+.+...+ +++++|.++|+++|+|++|+++++++++++++. ++..++++.+.+
T Consensus 335 ~g~~l~~~~---~~~~~l~~ai~~~l~~~~~~~~~~~l~~~~~~~----~~~~~aa~~i~~ 388 (392)
T TIGR01426 335 LGRHLPPEE---VTAEKLREAVLAVLSDPRYAERLRKMRAEIREA----GGARRAADEIEG 388 (392)
T ss_pred CEEEecccc---CCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHc----CCHHHHHHHHHH
Confidence 999998777 999999999999999999999999999999983 444444444433
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. |
| >cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-45 Score=356.83 Aligned_cols=365 Identities=19% Similarity=0.159 Sum_probs=252.5
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCCCCCCCcCC-------
Q 012212 5 PHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDGLELQAAD------- 77 (468)
Q Consensus 5 ~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~------- 77 (468)
|||+|++.|+.||++|+++||++|++|||+|+|++++.+...+.. .+++|..++.........
T Consensus 1 mrIl~~~~p~~GHv~P~l~la~~L~~rGh~V~~~t~~~~~~~v~~----------~G~~~~~~~~~~~~~~~~~~~~~~~ 70 (401)
T cd03784 1 MRVLITTIGSRGDVQPLVALAWALRAAGHEVRVATPPEFADLVEA----------AGLEFVPVGGDPDELLASPERNAGL 70 (401)
T ss_pred CeEEEEeCCCcchHHHHHHHHHHHHHCCCeEEEeeCHhHHHHHHH----------cCCceeeCCCCHHHHHhhhhhcccc
Confidence 699999999999999999999999999999999999999998887 557888777543221100
Q ss_pred ----CCCHHHHHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCcccHHHHHHHhCCceEEEcccchHHHHHHhhhh
Q 012212 78 ----REDPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVGSALEVAESMGIARAAVVPFGPGSLALSLQFP 153 (468)
Q Consensus 78 ----~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p 153 (468)
..........+.......++++++.++. .+||+||+|.+..++..+|+.+|||++.+++.+........+
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~pDlvi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~-- 144 (401)
T cd03784 71 LLLGPGLLLGALRLLRREAEAMLDDLVAAARD----WGPDLVVADPLAFAGAVAAEALGIPAVRLLLGPDTPTSAFPP-- 144 (401)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHhcc----cCCCEEEeCcHHHHHHHHHHHhCCCeEEeecccCCccccCCC--
Confidence 1112233344445555555666655543 679999999988899999999999999998765432110000
Q ss_pred hHhhcCCCCCCCcccccCCcccccCCCccCcccccCcCCCCCChhHHHHHHHHHHHHHhhc---------cccEEEEcCc
Q 012212 154 KLLEAGIIDPNGFAILNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVK---------ISNWIINNSV 224 (468)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~l~~~~ 224 (468)
+ . .. .....+....................+.+. ..+..+....
T Consensus 145 -------------~---------~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~ 197 (401)
T cd03784 145 -------------P---------L---GR--ANLRLYALLEAELWQDLLGAWLRARRRRLGLPPLSLLDGSDVPELYGFS 197 (401)
T ss_pred -------------c---------c---ch--HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCCcEEEecC
Confidence 0 0 00 000000000000000001111111111121 1234455555
Q ss_pred ccCChhhhccCCCceeec-cccCCCCCCCCCCCCCCCCCchhhhhhcccCccEEEEEeccccc-CCHHHHHHHHHHHHhC
Q 012212 225 YELDSPACDLIPNILPIG-PLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAV-LSQQQFAELALGLESL 302 (468)
Q Consensus 225 ~~le~~~~~~~p~v~~vG-pl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~-~~~~~~~~~~~a~~~~ 302 (468)
+.+..+..+++++..++| ++...... +..+.++..|++. ++++|||++||... ....+...+++++...
T Consensus 198 ~~~~~~~~~~~~~~~~~g~~~~~~~~~-------~~~~~~~~~~~~~--~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~ 268 (401)
T cd03784 198 PAVLPPPPDWPRFDLVTGYGFRDVPYN-------GPPPPELWLFLAA--GRPPVYVGFGSMVVRDPEALARLDVEAVATL 268 (401)
T ss_pred cccCCCCCCccccCcEeCCCCCCCCCC-------CCCCHHHHHHHhC--CCCcEEEeCCCCcccCHHHHHHHHHHHHHHc
Confidence 555555467777877876 33322221 1245667778765 45699999999865 3456788899999988
Q ss_pred CCCEEEEEcCCCCCCcccCCchhHHHHhCCCceEEcccChHHHhcCCCCCceeeccCchhHHHhhhcCCceeccccccch
Q 012212 303 QKPFLWVIRQDFMNGSRAKFPDGFIERVSNRGKIVEWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQ 382 (468)
Q Consensus 303 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~~~DQ 382 (468)
+.+++|+++... ... ...++|+++.+|+||.++|.|+++ ||||||+||++||+++|||+|++|+..||
T Consensus 269 ~~~~i~~~g~~~-------~~~---~~~~~~v~~~~~~p~~~ll~~~d~--~I~hgG~~t~~eal~~GvP~v~~P~~~dQ 336 (401)
T cd03784 269 GQRAILSLGWGG-------LGA---EDLPDNVRVVDFVPHDWLLPRCAA--VVHHGGAGTTAAALRAGVPQLVVPFFGDQ 336 (401)
T ss_pred CCeEEEEccCcc-------ccc---cCCCCceEEeCCCCHHHHhhhhhe--eeecCCchhHHHHHHcCCCEEeeCCCCCc
Confidence 999999887651 111 123689999999999999977555 99999999999999999999999999999
Q ss_pred hhhHHHHHHHhhceeEeeccCCCccCHHHHHHHHHHHhcChHHHHHHHHHHHHHHH
Q 012212 383 YQNRNYICEAWKIGLQFFADENGIITRQEIQRKVLTLLKNDDIRSNSLKLKEVARK 438 (468)
Q Consensus 383 ~~na~rv~~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~~~~r~~a~~l~~~~~~ 438 (468)
+.||+++++ +|+|+.++..+ ++.++|.++|+++|++ +++++++++++.+++
T Consensus 337 ~~~a~~~~~-~G~g~~l~~~~---~~~~~l~~al~~~l~~-~~~~~~~~~~~~~~~ 387 (401)
T cd03784 337 PFWAARVAE-LGAGPALDPRE---LTAERLAAALRRLLDP-PSRRRAAALLRRIRE 387 (401)
T ss_pred HHHHHHHHH-CCCCCCCCccc---CCHHHHHHHHHHHhCH-HHHHHHHHHHHHHHh
Confidence 999999999 59999998877 8999999999999985 466777777777765
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
| >COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-44 Score=345.15 Aligned_cols=394 Identities=20% Similarity=0.227 Sum_probs=249.6
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCCCCCCCcCCCCCHHH
Q 012212 4 QPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDGLELQAADREDPLK 83 (468)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 83 (468)
+|||+|+..|.+||++|+++||++|.++||+|+|+|++.+.+.+++.| +.|..++..-.... ...+...
T Consensus 1 ~mkil~~~~~~~Ghv~p~~aL~~eL~~~gheV~~~~~~~~~~~ve~ag----------~~f~~~~~~~~~~~-~~~~~~~ 69 (406)
T COG1819 1 RMKILFVVCGAYGHVNPCLALGKELRRRGHEVVFASTGKFKEFVEAAG----------LAFVAYPIRDSELA-TEDGKFA 69 (406)
T ss_pred CceEEEEeccccccccchHHHHHHHHhcCCeEEEEeCHHHHHHHHHhC----------cceeeccccCChhh-hhhhhhh
Confidence 589999999999999999999999999999999999999999999954 56666654311111 1111112
Q ss_pred HHHHH---HHHhhHHHHHHHHHHhhCCCCCCceEEEecCCcccHHHHHHHhCCceEEEcccchHHHHHHh-hhhhHhhcC
Q 012212 84 LGESV---ARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVGSALEVAESMGIARAAVVPFGPGSLALSL-QFPKLLEAG 159 (468)
Q Consensus 84 ~~~~~---~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~-~~p~~~~~~ 159 (468)
..+.+ .........++++-+.+ ..||+++.|.-...+ .++...++|++.............. +.|.....+
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~e----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (406)
T COG1819 70 GVKSFRRLLQQFKKLIRELLELLRE----LEPDLVVDDARLSLG-LAARLLGIPVVGINVAPYTPLPAAGLPLPPVGIAG 144 (406)
T ss_pred ccchhHHHhhhhhhhhHHHHHHHHh----cchhhhhcchhhhhh-hhhhhcccchhhhhhhhccCCcccccCcccccccc
Confidence 12222 22222333444444544 459999999766655 8999999999887665443221111 111111000
Q ss_pred CCCCCCcccccCCcccccCCCccCcccccCcCCCCCChhHHHHHHHHHH-HHHhhc-cccEEEEcCcccCChhhhccCCC
Q 012212 160 IIDPNGFAILNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICA-VIQAVK-ISNWIINNSVYELDSPACDLIPN 237 (468)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~l~~~~~~le~~~~~~~p~ 237 (468)
... .+ . ....+...........| ...........+....+ ..+... .+...+...+..+... ..++..
T Consensus 145 ~~~---~~---~--~~~~~~~~~~~~~~~~~-~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~ 214 (406)
T COG1819 145 KLP---IP---L--YPLPPRLVRPLIFARSW-LPKLVVRRNLGLELGLPNIRRLFASGPLLEIAYTDVLFPPG-DRLPFI 214 (406)
T ss_pred ccc---cc---c--cccChhhccccccchhh-hhhhhhhhhccccccccchHHHhcCCCCccccccccccCCC-CCCCCC
Confidence 000 00 0 00000000000000000 00000000000000000 011111 1111111111111110 223345
Q ss_pred ceeeccccCCCCCCCCCCCCCCCCCchhhhhhcccCccEEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCC
Q 012212 238 ILPIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALGLESLQKPFLWVIRQDFMNG 317 (468)
Q Consensus 238 v~~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~l~~~~~~~~~~ 317 (468)
..++||+....... ...| ...++++||+|+||.... .++++.+++++.+++.++++.+.+. ..
T Consensus 215 ~~~~~~~~~~~~~~------------~~~~--~~~d~~~vyvslGt~~~~-~~l~~~~~~a~~~l~~~vi~~~~~~-~~- 277 (406)
T COG1819 215 GPYIGPLLGEAANE------------LPYW--IPADRPIVYVSLGTVGNA-VELLAIVLEALADLDVRVIVSLGGA-RD- 277 (406)
T ss_pred cCcccccccccccc------------Ccch--hcCCCCeEEEEcCCcccH-HHHHHHHHHHHhcCCcEEEEecccc-cc-
Confidence 55666666554322 2233 334567999999999765 8999999999999999999988652 11
Q ss_pred cccCCchhHHHHhCCCceEEcccChHHHhcCCCCCceeeccCchhHHHhhhcCCceeccccccchhhhHHHHHHHhhcee
Q 012212 318 SRAKFPDGFIERVSNRGKIVEWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGL 397 (468)
Q Consensus 318 ~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~ 397 (468)
-....++|+++.+|+||.++|.++++ ||||||+||++|||++|||+|++|...||+.||.|+++ +|+|+
T Consensus 278 --------~~~~~p~n~~v~~~~p~~~~l~~ad~--vI~hGG~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~-~G~G~ 346 (406)
T COG1819 278 --------TLVNVPDNVIVADYVPQLELLPRADA--VIHHGGAGTTSEALYAGVPLVVIPDGADQPLNAERVEE-LGAGI 346 (406)
T ss_pred --------ccccCCCceEEecCCCHHHHhhhcCE--EEecCCcchHHHHHHcCCCEEEecCCcchhHHHHHHHH-cCCce
Confidence 11234788899999999999966655 99999999999999999999999999999999999999 59999
Q ss_pred EeeccCCCccCHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHh
Q 012212 398 QFFADENGIITRQEIQRKVLTLLKNDDIRSNSLKLKEVARKSLLGGGSSFRNFESFISDIKM 459 (468)
Q Consensus 398 ~l~~~~~~~~t~~~l~~ai~~~l~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 459 (468)
.++.++ +|.+.++++|+++|+|+.|+++++++++.++.. +| .+.+.+++++...
T Consensus 347 ~l~~~~---l~~~~l~~av~~vL~~~~~~~~~~~~~~~~~~~---~g--~~~~a~~le~~~~ 400 (406)
T COG1819 347 ALPFEE---LTEERLRAAVNEVLADDSYRRAAERLAEEFKEE---DG--PAKAADLLEEFAR 400 (406)
T ss_pred ecCccc---CCHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhc---cc--HHHHHHHHHHHHh
Confidence 999988 999999999999999999999999999999995 33 5656666666443
|
|
| >KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-41 Score=342.07 Aligned_cols=413 Identities=29% Similarity=0.454 Sum_probs=259.1
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhc---cCCCCCeEEEEcCCCCCCCcCCC-C
Q 012212 4 QPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKA---EDSSSQIKLVTIPDGLELQAADR-E 79 (468)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~---~~~~~~i~~~~~~~~~~~~~~~~-~ 79 (468)
..+++++++|+.||++|+..||+.|+++||+||++++.......... .... ........+...+++.+...... .
T Consensus 5 ~~~~il~~~p~~sH~~~~~~la~~L~~~gh~vt~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (496)
T KOG1192|consen 5 KAHNILVPFPGQSHLNPMLQLAKRLAERGHNVTVVTPSFNALKLSKS-SKSKSIKKINPPPFEFLTIPDGLPEGWEDDDL 83 (496)
T ss_pred cceeEEEECCcccHHHHHHHHHHHHHHcCCceEEEEeechhcccCCc-ccceeeeeeecChHHhhhhhhhhccchHHHHH
Confidence 35778888889999999999999999999999999998766554321 0000 00001111111111111111000 0
Q ss_pred CHHHHHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCcccHHHHHHHhC-CceEEEcccchHHHHHHhhhhhHhhc
Q 012212 80 DPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVGSALEVAESMG-IARAAVVPFGPGSLALSLQFPKLLEA 158 (468)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~lg-iP~v~~~~~~~~~~~~~~~~p~~~~~ 158 (468)
........+...+...+++.+..+.... ..++|++|+|.+..+...++.... +|...+.+..........+.+..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~g~~~~~~--- 159 (496)
T KOG1192|consen 84 DISESLLELNKTCEDLLRDPLEKLLLLK-SEKFDLIISDPFLGLFLLLAIPSFVIPLLSFPTSSAVLLALGLPSPLS--- 159 (496)
T ss_pred HHHHHHHHHHHHHHHHHhchHHHHHHhh-cCCccEEEechhhHHHHHhcccceEEEeecccCchHHHHhcCCcCccc---
Confidence 1111123344444555555443333221 133999999998666776776664 88877777666554433322211
Q ss_pred CCCCCCCcccccCCcccccCCCccCcccccCc---CCCCCChhHHHHHHHHH-------HHHHhhccccEEEEcCcccCC
Q 012212 159 GIIDPNGFAILNDGLISLSDEIPAWKRNEYTW---SFPDEPSEQKILLGIIC-------AVIQAVKISNWIINNSVYELD 228 (468)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~l~~~~~~le 228 (468)
..+....+ ..........+...+....+.. ...............+. ....-+...+..+.|+++.++
T Consensus 160 -~~p~~~~~-~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ln~~~~~~ 237 (496)
T KOG1192|consen 160 -YVPSPFSL-SSGDDMSFPERVPNLIKKDLPSFLFSLSDDRKQDKISKELLGDILNWKPTASGIIVNASFIFLNSNPLLD 237 (496)
T ss_pred -ccCcccCc-cccccCcHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCCcccccccHHHhhhcCeEEEEccCcccC
Confidence 11100000 0000000000000000000000 00000000000000000 011223466788999999888
Q ss_pred hhhhccCCCceeeccccCCCCCCCCCCCCCCCCCchhhhhhcccCc--cEEEEEecccc---cCCHHHHHHHHHHHHhC-
Q 012212 229 SPACDLIPNILPIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIR--SVVYVAFGSVA---VLSQQQFAELALGLESL- 302 (468)
Q Consensus 229 ~~~~~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~--~vv~vs~Gs~~---~~~~~~~~~~~~a~~~~- 302 (468)
++..+..+++++|||++...... + .....+|++..+.. ++|||||||.. .++.++...++.+++.+
T Consensus 238 ~~~~~~~~~v~~IG~l~~~~~~~------~--~~~~~~wl~~~~~~~~~vvyvSfGS~~~~~~lp~~~~~~l~~~l~~~~ 309 (496)
T KOG1192|consen 238 FEPRPLLPKVIPIGPLHVKDSKQ------K--SPLPLEWLDILDESRHSVVYISFGSMVNSADLPEEQKKELAKALESLQ 309 (496)
T ss_pred CCCCCCCCCceEECcEEecCccc------c--ccccHHHHHHHhhccCCeEEEECCcccccccCCHHHHHHHHHHHHhCC
Confidence 85477789999999999983322 1 11345666665554 79999999997 79999999999999999
Q ss_pred CCCEEEEEcCCCCCCcccCCchhHHHHhCCCceEEcccChHHH-hcCCCCCceeeccCchhHHHhhhcCCceeccccccc
Q 012212 303 QKPFLWVIRQDFMNGSRAKFPDGFIERVSNRGKIVEWAPQEKV-LGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSD 381 (468)
Q Consensus 303 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~l-l~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~~~D 381 (468)
+..|+|++... ....+++++.++.++||...+|+||.++ |.|+++++||||||+||++|++++|||+|++|+++|
T Consensus 310 ~~~FiW~~~~~----~~~~~~~~~~~~~~~nV~~~~W~PQ~~lll~H~~v~~FvTHgG~nSt~E~~~~GvP~v~~Plf~D 385 (496)
T KOG1192|consen 310 GVTFLWKYRPD----DSIYFPEGLPNRGRGNVVLSKWAPQNDLLLDHPAVGGFVTHGGWNSTLESIYSGVPMVCVPLFGD 385 (496)
T ss_pred CceEEEEecCC----cchhhhhcCCCCCcCceEEecCCCcHHHhcCCCcCcEEEECCcccHHHHHHhcCCceecCCcccc
Confidence 77889999865 1111233332112457888899999998 599999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHhhceeEeeccCCCccCHHHHHHHHHHHhcChHHHHHHHHHHHHHHHH
Q 012212 382 QYQNRNYICEAWKIGLQFFADENGIITRQEIQRKVLTLLKNDDIRSNSLKLKEVARKS 439 (468)
Q Consensus 382 Q~~na~rv~~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~~~~r~~a~~l~~~~~~~ 439 (468)
|+.||++++++ |.|..+...+ .+...+.+++.+++++++|+++++++++.+++.
T Consensus 386 Q~~Na~~i~~~-g~~~v~~~~~---~~~~~~~~~~~~il~~~~y~~~~~~l~~~~~~~ 439 (496)
T KOG1192|consen 386 QPLNARLLVRH-GGGGVLDKRD---LVSEELLEAIKEILENEEYKEAAKRLSEILRDQ 439 (496)
T ss_pred chhHHHHHHhC-CCEEEEehhh---cCcHHHHHHHHHHHcChHHHHHHHHHHHHHHcC
Confidence 99999999997 7777776665 666669999999999999999999999999873
|
|
| >PF13528 Glyco_trans_1_3: Glycosyl transferase family 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.9e-26 Score=216.94 Aligned_cols=306 Identities=17% Similarity=0.159 Sum_probs=193.5
Q ss_pred CEEEEEcCC-CccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCCCCCCCcCCCCCHHH
Q 012212 5 PHVLVIPYP-AQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDGLELQAADREDPLK 83 (468)
Q Consensus 5 ~~Il~~~~~-~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 83 (468)
|||+|...+ |.||+.+++.||++| |||+|+|++.....+.+.. .+....+++.........-+...
T Consensus 1 MkIl~~v~~~G~GH~~R~~~la~~L--rg~~v~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~ 67 (318)
T PF13528_consen 1 MKILFYVQGHGLGHASRCLALARAL--RGHEVTFITSGPAPEFLKP-----------RFPVREIPGLGPIQENGRLDRWK 67 (318)
T ss_pred CEEEEEeCCCCcCHHHHHHHHHHHH--ccCceEEEEcCCcHHHhcc-----------ccCEEEccCceEeccCCccchHH
Confidence 789977666 779999999999999 6999999999876655533 13444444321111111112212
Q ss_pred HHHHHH---HHhhHHHHHHHHHHhhCCCCCCceEEEecCCcccHHHHHHHhCCceEEEcccchHHHHHHhhhhhHhhcCC
Q 012212 84 LGESVA---RAMRGCLRDLIEKINQSNDCEPIRCVIADVTVGSALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGI 160 (468)
Q Consensus 84 ~~~~~~---~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~ 160 (468)
...... .......+++++.+.. .+||+||+|. .+.+..+|+..|||++.+.........
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~l~~----~~pDlVIsD~-~~~~~~aa~~~giP~i~i~~~~~~~~~------------- 129 (318)
T PF13528_consen 68 TVRNNIRWLARLARRIRREIRWLRE----FRPDLVISDF-YPLAALAARRAGIPVIVISNQYWFLHP------------- 129 (318)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHh----cCCCEEEEcC-hHHHHHHHHhcCCCEEEEEehHHcccc-------------
Confidence 222111 2233445555555555 5699999995 445778999999999998764431100
Q ss_pred CCCCCcccccCCcccccCCCccCcccccCcCCCCCChhHHHHHHHHHHHHHh--hccccEEEEcCcccCChhhhccCCCc
Q 012212 161 IDPNGFAILNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQA--VKISNWIINNSVYELDSPACDLIPNI 238 (468)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~le~~~~~~~p~v 238 (468)
. ....... .....+.+.... ...++..+..+++ . + .+...++
T Consensus 130 ------------------~-----------~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~~~-~--~-~~~~~~~ 173 (318)
T PF13528_consen 130 ------------------N-----------FWLPWDQ---DFGRLIERYIDRYHFPPADRRLALSFY-P--P-LPPFFRV 173 (318)
T ss_pred ------------------c-----------CCcchhh---hHHHHHHHhhhhccCCcccceecCCcc-c--c-ccccccc
Confidence 0 0000000 011111111211 2234444433332 1 1 2223356
Q ss_pred eeeccccCCCCCCCCCCCCCCCCCchhhhhhcccCccEEEEEecccccCCHHHHHHHHHHHHhCC-CCEEEEEcCCCCCC
Q 012212 239 LPIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALGLESLQ-KPFLWVIRQDFMNG 317 (468)
Q Consensus 239 ~~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~a~~~~~-~~~l~~~~~~~~~~ 317 (468)
.++||+..+.... . . ..+++.|+|++|+.... .+++++...+ +.+++. +..
T Consensus 174 ~~~~p~~~~~~~~--------~--------~-~~~~~~iLv~~gg~~~~------~~~~~l~~~~~~~~~v~-g~~---- 225 (318)
T PF13528_consen 174 PFVGPIIRPEIRE--------L--------P-PEDEPKILVYFGGGGPG------DLIEALKALPDYQFIVF-GPN---- 225 (318)
T ss_pred cccCchhcccccc--------c--------C-CCCCCEEEEEeCCCcHH------HHHHHHHhCCCCeEEEE-cCC----
Confidence 6788877654332 1 1 12345799999986432 5667777766 455544 433
Q ss_pred cccCCchhHHHHhCCCceEEccc--ChHHHhcCCCCCceeeccCchhHHHhhhcCCceecccc--ccchhhhHHHHHHHh
Q 012212 318 SRAKFPDGFIERVSNRGKIVEWA--PQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPY--FSDQYQNRNYICEAW 393 (468)
Q Consensus 318 ~~~~~~~~~~~~~~~nv~~~~~~--p~~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~--~~DQ~~na~rv~~~l 393 (468)
. .+..++|+.+.+|. ...++|..+ +++|+|||+||++|++++|+|+|++|. ..||..||+++++ +
T Consensus 226 ----~----~~~~~~ni~~~~~~~~~~~~~m~~a--d~vIs~~G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~-~ 294 (318)
T PF13528_consen 226 ----A----ADPRPGNIHVRPFSTPDFAELMAAA--DLVISKGGYTTISEALALGKPALVIPRPGQDEQEYNARKLEE-L 294 (318)
T ss_pred ----c----ccccCCCEEEeecChHHHHHHHHhC--CEEEECCCHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHH-C
Confidence 1 01126888999876 457789555 559999999999999999999999999 7899999999999 5
Q ss_pred hceeEeeccCCCccCHHHHHHHHHHH
Q 012212 394 KIGLQFFADENGIITRQEIQRKVLTL 419 (468)
Q Consensus 394 G~g~~l~~~~~~~~t~~~l~~ai~~~ 419 (468)
|+|+.++.++ ++++.|+++|+++
T Consensus 295 G~~~~~~~~~---~~~~~l~~~l~~~ 317 (318)
T PF13528_consen 295 GLGIVLSQED---LTPERLAEFLERL 317 (318)
T ss_pred CCeEEccccc---CCHHHHHHHHhcC
Confidence 9999998877 9999999999764
|
|
| >PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.95 E-value=1e-25 Score=214.65 Aligned_cols=323 Identities=15% Similarity=0.155 Sum_probs=198.6
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCCCCCCCcCCCCCHHH
Q 012212 4 QPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDGLELQAADREDPLK 83 (468)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 83 (468)
|.||++.+.++.||++|.++||++|.++||+|+|++.....+.- . ....++.+..++..--. ......
T Consensus 1 ~~~i~~~~GGTGGHi~Pala~a~~l~~~g~~v~~vg~~~~~e~~---l-----~~~~g~~~~~~~~~~l~----~~~~~~ 68 (352)
T PRK12446 1 MKKIVFTGGGSAGHVTPNLAIIPYLKEDNWDISYIGSHQGIEKT---I-----IEKENIPYYSISSGKLR----RYFDLK 68 (352)
T ss_pred CCeEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEECCCccccc---c-----CcccCCcEEEEeccCcC----CCchHH
Confidence 45789999999999999999999999999999999976543321 1 11145777777632111 111122
Q ss_pred HHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCcc--cHHHHHHHhCCceEEEcccchHHHHHHhhhhhHhhcCCC
Q 012212 84 LGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVG--SALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGII 161 (468)
Q Consensus 84 ~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~ 161 (468)
.+..........+ ..++-+++ .+||+|+...-.. .+..+|..+++|++.......
T Consensus 69 ~~~~~~~~~~~~~-~~~~i~~~----~kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i~e~n~~------------------ 125 (352)
T PRK12446 69 NIKDPFLVMKGVM-DAYVRIRK----LKPDVIFSKGGFVSVPVVIGGWLNRVPVLLHESDMT------------------ 125 (352)
T ss_pred HHHHHHHHHHHHH-HHHHHHHh----cCCCEEEecCchhhHHHHHHHHHcCCCEEEECCCCC------------------
Confidence 2333333333222 22222333 6799999987554 467899999999987543111
Q ss_pred CCCCcccccCCcccccCCCccCcccccCcCCCCCChhHHHHHHHHHHHHHhhccccEEEEcCcccCChhhhccC-CCcee
Q 012212 162 DPNGFAILNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACDLI-PNILP 240 (468)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~~~~~-p~v~~ 240 (468)
+++. .... .+.++.++.. +++ ....+. .++.+
T Consensus 126 ----------------~g~~------------------nr~~---------~~~a~~v~~~-f~~---~~~~~~~~k~~~ 158 (352)
T PRK12446 126 ----------------PGLA------------------NKIA---------LRFASKIFVT-FEE---AAKHLPKEKVIY 158 (352)
T ss_pred ----------------ccHH------------------HHHH---------HHhhCEEEEE-ccc---hhhhCCCCCeEE
Confidence 0000 0011 1122333322 221 101122 36788
Q ss_pred eccccCCCCCCCCCCCCCCCCCchhhhhhcccCccEEEEEecccccCCH-HHHHHHHHHHHhCCCCEEEEEcCCCCCCcc
Q 012212 241 IGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQ-QQFAELALGLESLQKPFLWVIRQDFMNGSR 319 (468)
Q Consensus 241 vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~~-~~~~~~~~a~~~~~~~~l~~~~~~~~~~~~ 319 (468)
+|+-+.+.... ...+...+.+...+++++|+|.-||...... +.+..++..+.. +.+++++++..
T Consensus 159 tG~Pvr~~~~~-------~~~~~~~~~~~l~~~~~~iLv~GGS~Ga~~in~~~~~~l~~l~~-~~~vv~~~G~~------ 224 (352)
T PRK12446 159 TGSPVREEVLK-------GNREKGLAFLGFSRKKPVITIMGGSLGAKKINETVREALPELLL-KYQIVHLCGKG------ 224 (352)
T ss_pred ECCcCCccccc-------ccchHHHHhcCCCCCCcEEEEECCccchHHHHHHHHHHHHhhcc-CcEEEEEeCCc------
Confidence 89755543221 0111111223333456799999999854222 233334444322 46777777744
Q ss_pred cCCchhHHHHhCCCceEEccc-C-hHHHhcCCCCCceeeccCchhHHHhhhcCCceeccccc-----cchhhhHHHHHHH
Q 012212 320 AKFPDGFIERVSNRGKIVEWA-P-QEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYF-----SDQYQNRNYICEA 392 (468)
Q Consensus 320 ~~~~~~~~~~~~~nv~~~~~~-p-~~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~~-----~DQ~~na~rv~~~ 392 (468)
.+.... +. .++.++.+|+ + ..+++.++++ +|||||.+|+.|++++|+|+|++|+. .||..||..+++.
T Consensus 225 -~~~~~~-~~-~~~~~~~~f~~~~m~~~~~~adl--vIsr~G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~~ 299 (352)
T PRK12446 225 -NLDDSL-QN-KEGYRQFEYVHGELPDILAITDF--VISRAGSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESFERQ 299 (352)
T ss_pred -hHHHHH-hh-cCCcEEecchhhhHHHHHHhCCE--EEECCChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHHHHC
Confidence 111111 11 1355666887 4 5678977765 99999999999999999999999974 4899999999995
Q ss_pred hhceeEeeccCCCccCHHHHHHHHHHHhcChH-HHHHHHH
Q 012212 393 WKIGLQFFADENGIITRQEIQRKVLTLLKNDD-IRSNSLK 431 (468)
Q Consensus 393 lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~~~-~r~~a~~ 431 (468)
|+|..+..++ ++++.|.+++.++++|++ |++++++
T Consensus 300 -g~~~~l~~~~---~~~~~l~~~l~~ll~~~~~~~~~~~~ 335 (352)
T PRK12446 300 -GYASVLYEED---VTVNSLIKHVEELSHNNEKYKTALKK 335 (352)
T ss_pred -CCEEEcchhc---CCHHHHHHHHHHHHcCHHHHHHHHHH
Confidence 9999998777 999999999999998875 5544433
|
|
| >TIGR00661 MJ1255 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.1e-23 Score=197.56 Aligned_cols=309 Identities=14% Similarity=0.115 Sum_probs=174.2
Q ss_pred EEEEEcCC-CccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeE-EEEcCCCCCCCcCCCCCHHH
Q 012212 6 HVLVIPYP-AQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIK-LVTIPDGLELQAADREDPLK 83 (468)
Q Consensus 6 ~Il~~~~~-~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~~~~~ 83 (468)
||+|...+ |.||+.|.++||++|.+ ||+|+|+++......+...+ +. +...|..........-+...
T Consensus 1 ril~~~~g~G~GH~~r~~ala~~L~~-g~ev~~~~~~~~~~~~~~~~----------~~~~~~~p~~~~~~~~~~~~~~~ 69 (321)
T TIGR00661 1 KILYSVCGEGFGHTTRSVAIGEALKN-DYEVSYIASGRSKNYISKYG----------FKVFETFPGIKLKGEDGKVNIVK 69 (321)
T ss_pred CEEEEEeccCccHHHHHHHHHHHHhC-CCeEEEEEcCCHHHhhhhhc----------CcceeccCCceEeecCCcCcHHH
Confidence 57776555 55999999999999999 99999999888555555432 22 22222110000000011111
Q ss_pred HHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCcccHHHHHHHhCCceEEEcccchHHHHHHhhhhhHhhcCCCCC
Q 012212 84 LGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVGSALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGIIDP 163 (468)
Q Consensus 84 ~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~ 163 (468)
.+..........+.+.++.+++ .+||+||+| ..+.+..+|+.+|||++.+..+....
T Consensus 70 ~l~~~~~~~~~~~~~~~~~l~~----~~pDlVi~d-~~~~~~~aA~~~~iP~i~i~~q~~~~------------------ 126 (321)
T TIGR00661 70 TLRNKEYSPKKAIRREINIIRE----YNPDLIISD-FEYSTVVAAKLLKIPVICISNQNYTR------------------ 126 (321)
T ss_pred HHHhhccccHHHHHHHHHHHHh----cCCCEEEEC-CchHHHHHHHhcCCCEEEEecchhhc------------------
Confidence 1110001101234444444444 679999999 55567889999999999876521100
Q ss_pred CCcccccCCcccccCCCccCcccccCcCCCCCChhHHHHHHHHHHHHHhh-ccccEEEEcCcccCChhhhccCCCce--e
Q 012212 164 NGFAILNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAV-KISNWIINNSVYELDSPACDLIPNIL--P 240 (468)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~le~~~~~~~p~v~--~ 240 (468)
+ ++. . .. ...... .....+ ...+......++... +..|.+. .
T Consensus 127 --~-----------~~~------------~-~~--~~~~~~---~~~~~~~~~~~~~~~~~~~~~~----~~~p~~~~~~ 171 (321)
T TIGR00661 127 --Y-----------PLK------------T-DL--IVYPTM---AALRIFNERCERFIVPDYPFPY----TICPKIIKNM 171 (321)
T ss_pred --C-----------Ccc------------c-ch--hHHHHH---HHHHHhccccceEeeecCCCCC----CCCccccccC
Confidence 0 000 0 00 000000 111111 122333223222111 1111110 0
Q ss_pred eccccCCCCCCCCCCCCCCCCCchhhhhhcccCccEEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccc
Q 012212 241 IGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALGLESLQKPFLWVIRQDFMNGSRA 320 (468)
Q Consensus 241 vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~l~~~~~~~~~~~~~ 320 (468)
-+|.. ..+..++.. .+++.|++.+|+... ..+++++.+.+. +.+++... .
T Consensus 172 ~~~~~---------------~~~~~~~~~--~~~~~iLv~~g~~~~------~~l~~~l~~~~~-~~~i~~~~------~ 221 (321)
T TIGR00661 172 EGPLI---------------RYDVDDVDN--YGEDYILVYIGFEYR------YKILELLGKIAN-VKFVCYSY------E 221 (321)
T ss_pred CCccc---------------chhhhcccc--CCCCcEEEECCcCCH------HHHHHHHHhCCC-eEEEEeCC------C
Confidence 01111 011112221 134568888777432 345677776654 33333322 0
Q ss_pred CCchhHHHHhCCCceEEcccC--hHHHhcCCCCCceeeccCchhHHHhhhcCCceecccccc--chhhhHHHHHHHhhce
Q 012212 321 KFPDGFIERVSNRGKIVEWAP--QEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFS--DQYQNRNYICEAWKIG 396 (468)
Q Consensus 321 ~~~~~~~~~~~~nv~~~~~~p--~~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~~~--DQ~~na~rv~~~lG~g 396 (468)
..... .++|+.+.+|.| ..++| +.++++|||||++|++|++++|+|++++|... ||..||+.+++. |+|
T Consensus 222 ~~~~~----~~~~v~~~~~~~~~~~~~l--~~ad~vI~~~G~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~-g~~ 294 (321)
T TIGR00661 222 VAKNS----YNENVEIRRITTDNFKELI--KNAELVITHGGFSLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDL-GCG 294 (321)
T ss_pred CCccc----cCCCEEEEECChHHHHHHH--HhCCEEEECCChHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHC-CCE
Confidence 11112 257889999998 35566 55566999999999999999999999999854 999999999995 999
Q ss_pred eEeeccCCCccCHHHHHHHHHHHhcChHHH
Q 012212 397 LQFFADENGIITRQEIQRKVLTLLKNDDIR 426 (468)
Q Consensus 397 ~~l~~~~~~~~t~~~l~~ai~~~l~~~~~r 426 (468)
+.++..+ + ++.+++.++++|++|.
T Consensus 295 ~~l~~~~---~---~~~~~~~~~~~~~~~~ 318 (321)
T TIGR00661 295 IALEYKE---L---RLLEAILDIRNMKRYK 318 (321)
T ss_pred EEcChhh---H---HHHHHHHhcccccccc
Confidence 9998765 4 7777888888888875
|
This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases. |
| >COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.90 E-value=4e-21 Score=180.64 Aligned_cols=323 Identities=18% Similarity=0.175 Sum_probs=195.2
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHHCCC-EEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCCCCCCCcCCCCCHHH
Q 012212 5 PHVLVIPYPAQGHVAPLMKLATKIAERAI-KVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDGLELQAADREDPLK 83 (468)
Q Consensus 5 ~~Il~~~~~~~GH~~p~~~LA~~L~~rGH-~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 83 (468)
++|++...++.||+.|.++|+++|.++|+ +|.++.+....+.... ...++.++.++.+.............
T Consensus 1 ~~ivl~~gGTGGHv~pAlAl~~~l~~~g~~~v~~~~~~~~~e~~l~--------~~~~~~~~~I~~~~~~~~~~~~~~~~ 72 (357)
T COG0707 1 KKIVLTAGGTGGHVFPALALAEELAKRGWEQVIVLGTGDGLEAFLV--------KQYGIEFELIPSGGLRRKGSLKLLKA 72 (357)
T ss_pred CeEEEEeCCCccchhHHHHHHHHHHhhCccEEEEecccccceeeec--------cccCceEEEEecccccccCcHHHHHH
Confidence 47888888999999999999999999999 5888866554443332 11467777777543333211112222
Q ss_pred HHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCcc--cHHHHHHHhCCceEEEcccchHHHHHHhhhhhHhhcCCC
Q 012212 84 LGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVG--SALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGII 161 (468)
Q Consensus 84 ~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~ 161 (468)
.+..+.. ....+.++++ .+||+|+.-.-+. .+..+|..+|||.+..-.-..
T Consensus 73 ~~~~~~~--~~~a~~il~~-------~kPd~vig~Ggyvs~P~~~Aa~~~~iPv~ihEqn~~------------------ 125 (357)
T COG0707 73 PFKLLKG--VLQARKILKK-------LKPDVVIGTGGYVSGPVGIAAKLLGIPVIIHEQNAV------------------ 125 (357)
T ss_pred HHHHHHH--HHHHHHHHHH-------cCCCEEEecCCccccHHHHHHHhCCCCEEEEecCCC------------------
Confidence 2222221 1124555555 6799999955444 667889999999987542111
Q ss_pred CCCCcccccCCcccccCCCccCcccccCcCCCCCChhHHHHHHHHHHHHHhhccccEEEEcCcccCChhhhccCCCceee
Q 012212 162 DPNGFAILNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACDLIPNILPI 241 (468)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~~~~~p~v~~v 241 (468)
++.. | .+. ...++.+. .+++..+. ..-..+++.+
T Consensus 126 ----------------~G~a--------n----------k~~---------~~~a~~V~-~~f~~~~~--~~~~~~~~~t 159 (357)
T COG0707 126 ----------------PGLA--------N----------KIL---------SKFAKKVA-SAFPKLEA--GVKPENVVVT 159 (357)
T ss_pred ----------------cchh--------H----------HHh---------HHhhceee-eccccccc--cCCCCceEEe
Confidence 1110 0 000 00112222 22221110 1111257777
Q ss_pred cc-ccCCCCCCCCCCCCCCCCCchhhhhhcccCccEEEEEecccccCCHHHHHH-HHHHHHhCC--CCEEEEEcCCCCCC
Q 012212 242 GP-LLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAE-LALGLESLQ--KPFLWVIRQDFMNG 317 (468)
Q Consensus 242 Gp-l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~-~~~a~~~~~--~~~l~~~~~~~~~~ 317 (468)
|- +..+-.. .+.....+ ....++++|+|+-||... ..+.. +.+++..+. ..++..++..
T Consensus 160 G~Pvr~~~~~---------~~~~~~~~-~~~~~~~~ilV~GGS~Ga---~~ln~~v~~~~~~l~~~~~v~~~~G~~---- 222 (357)
T COG0707 160 GIPVRPEFEE---------LPAAEVRK-DGRLDKKTILVTGGSQGA---KALNDLVPEALAKLANRIQVIHQTGKN---- 222 (357)
T ss_pred cCcccHHhhc---------cchhhhhh-hccCCCcEEEEECCcchh---HHHHHHHHHHHHHhhhCeEEEEEcCcc----
Confidence 73 3222111 00111111 111256799999888743 22333 333443443 4555555543
Q ss_pred cccCCchhHHHHh-CCC-ceEEcccCh-HHHhcCCCCCceeeccCchhHHHhhhcCCceecccc-cc---chhhhHHHHH
Q 012212 318 SRAKFPDGFIERV-SNR-GKIVEWAPQ-EKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPY-FS---DQYQNRNYIC 390 (468)
Q Consensus 318 ~~~~~~~~~~~~~-~~n-v~~~~~~p~-~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~-~~---DQ~~na~rv~ 390 (468)
. .+...... ..+ +.+.+|..+ ..+++-+++ +||++|.+|+.|++++|+|+|.+|+ .+ +|..||..++
T Consensus 223 ---~-~~~~~~~~~~~~~~~v~~f~~dm~~~~~~ADL--vIsRaGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~ 296 (357)
T COG0707 223 ---D-LEELKSAYNELGVVRVLPFIDDMAALLAAADL--VISRAGALTIAELLALGVPAILVPYPPGADGHQEYNAKFLE 296 (357)
T ss_pred ---h-HHHHHHHHhhcCcEEEeeHHhhHHHHHHhccE--EEeCCcccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHHH
Confidence 1 12222222 233 666788866 668855555 9999999999999999999999997 33 8999999999
Q ss_pred HHhhceeEeeccCCCccCHHHHHHHHHHHhcChHHHHHHHHHHHHHHH
Q 012212 391 EAWKIGLQFFADENGIITRQEIQRKVLTLLKNDDIRSNSLKLKEVARK 438 (468)
Q Consensus 391 ~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~~~~r~~a~~l~~~~~~ 438 (468)
++ |.|+.++..+ +|.+++.+.|.+++++ .++.+++++..++
T Consensus 297 ~~-gaa~~i~~~~---lt~~~l~~~i~~l~~~---~~~l~~m~~~a~~ 337 (357)
T COG0707 297 KA-GAALVIRQSE---LTPEKLAELILRLLSN---PEKLKAMAENAKK 337 (357)
T ss_pred hC-CCEEEecccc---CCHHHHHHHHHHHhcC---HHHHHHHHHHHHh
Confidence 97 9999999988 9999999999999998 4455556666655
|
|
| >PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1e-20 Score=182.82 Aligned_cols=345 Identities=14% Similarity=0.094 Sum_probs=199.1
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCCCCCCCcCCCCCHHH
Q 012212 4 QPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDGLELQAADREDPLK 83 (468)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 83 (468)
||||+++..+..||...++.||++|.++||+|++++.+..... .. ....+++++.++..-.. ......
T Consensus 1 ~~~i~i~~~g~gG~~~~~~~la~~L~~~g~ev~vv~~~~~~~~-~~-------~~~~g~~~~~~~~~~~~----~~~~~~ 68 (357)
T PRK00726 1 MKKILLAGGGTGGHVFPALALAEELKKRGWEVLYLGTARGMEA-RL-------VPKAGIEFHFIPSGGLR----RKGSLA 68 (357)
T ss_pred CcEEEEEcCcchHhhhHHHHHHHHHHhCCCEEEEEECCCchhh-hc-------cccCCCcEEEEeccCcC----CCChHH
Confidence 4889999888889999999999999999999999998653211 00 00035666665532111 111122
Q ss_pred HHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCcc--cHHHHHHHhCCceEEEcccchHHHHHHhhhhhHhhcCCC
Q 012212 84 LGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVG--SALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGII 161 (468)
Q Consensus 84 ~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~ 161 (468)
........ ...+..+.+.+++ .+||+|++..... .+..+++..++|+++......
T Consensus 69 ~l~~~~~~-~~~~~~~~~~ik~----~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~~------------------ 125 (357)
T PRK00726 69 NLKAPFKL-LKGVLQARKILKR----FKPDVVVGFGGYVSGPGGLAARLLGIPLVIHEQNAV------------------ 125 (357)
T ss_pred HHHHHHHH-HHHHHHHHHHHHh----cCCCEEEECCCcchhHHHHHHHHcCCCEEEEcCCCC------------------
Confidence 22222111 1223333334443 5699999996332 445667888999986421000
Q ss_pred CCCCcccccCCcccccCCCccCcccccCcCCCCCChhHHHHHHHHHHHHHhhccccEEEEcCcccCChhhhccCCCceee
Q 012212 162 DPNGFAILNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACDLIPNILPI 241 (468)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~~~~~p~v~~v 241 (468)
+ . ....+ . ...+|.++..+...+. .....++.++
T Consensus 126 ----------------~------------~------~~~r~---~------~~~~d~ii~~~~~~~~---~~~~~~i~vi 159 (357)
T PRK00726 126 ----------------P------------G------LANKL---L------ARFAKKVATAFPGAFP---EFFKPKAVVT 159 (357)
T ss_pred ----------------c------------c------HHHHH---H------HHHhchheECchhhhh---ccCCCCEEEE
Confidence 0 0 00000 0 1122333333321111 1122467777
Q ss_pred ccccCCCCCCCCCCCCCCCCCchhhhhhcccCccEEEEEecccccCCHHHHHHHHHHHHhCCC--CEEEEEcCCCCCCcc
Q 012212 242 GPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALGLESLQK--PFLWVIRQDFMNGSR 319 (468)
Q Consensus 242 Gpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~a~~~~~~--~~l~~~~~~~~~~~~ 319 (468)
|+........ .+. ....+...++.++|++..|+.. ...+...+.+++.++.. .+++.++.+ .
T Consensus 160 ~n~v~~~~~~--------~~~-~~~~~~~~~~~~~i~~~gg~~~--~~~~~~~l~~a~~~~~~~~~~~~~~G~g----~- 223 (357)
T PRK00726 160 GNPVREEILA--------LAA-PPARLAGREGKPTLLVVGGSQG--ARVLNEAVPEALALLPEALQVIHQTGKG----D- 223 (357)
T ss_pred CCCCChHhhc--------ccc-hhhhccCCCCCeEEEEECCcHh--HHHHHHHHHHHHHHhhhCcEEEEEcCCC----c-
Confidence 7544332111 000 0001111223446666555532 11222233366554433 344555544 1
Q ss_pred cCCchhHHHH--hCCCceEEccc-ChHHHhcCCCCCceeeccCchhHHHhhhcCCceecccc----ccchhhhHHHHHHH
Q 012212 320 AKFPDGFIER--VSNRGKIVEWA-PQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPY----FSDQYQNRNYICEA 392 (468)
Q Consensus 320 ~~~~~~~~~~--~~~nv~~~~~~-p~~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~----~~DQ~~na~rv~~~ 392 (468)
. +.+.+. ..-++.+.+|+ +..+++..+++ +|+|+|.++++||+++|+|+|++|. ..||..|+..+.+.
T Consensus 224 --~-~~~~~~~~~~~~v~~~g~~~~~~~~~~~~d~--~i~~~g~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~ 298 (357)
T PRK00726 224 --L-EEVRAAYAAGINAEVVPFIDDMAAAYAAADL--VICRAGASTVAELAAAGLPAILVPLPHAADDHQTANARALVDA 298 (357)
T ss_pred --H-HHHHHHhhcCCcEEEeehHhhHHHHHHhCCE--EEECCCHHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHC
Confidence 1 222222 22237778998 45788955555 9999999999999999999999996 46899999999995
Q ss_pred hhceeEeeccCCCccCHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHH
Q 012212 393 WKIGLQFFADENGIITRQEIQRKVLTLLKNDDIRSNSLKLKEVARKSLLGGGSSFRNFESFISDIK 458 (468)
Q Consensus 393 lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 458 (468)
|.|+.++.++ ++++.++++|.++++|++++++..+-+.++.+ .+++.+.++.+++.++
T Consensus 299 -~~g~~~~~~~---~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 356 (357)
T PRK00726 299 -GAALLIPQSD---LTPEKLAEKLLELLSDPERLEAMAEAARALGK----PDAAERLADLIEELAR 356 (357)
T ss_pred -CCEEEEEccc---CCHHHHHHHHHHHHcCHHHHHHHHHHHHhcCC----cCHHHHHHHHHHHHhh
Confidence 9999998776 78999999999999999888766665544432 4555555555555443
|
|
| >cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.5e-19 Score=170.98 Aligned_cols=324 Identities=15% Similarity=0.107 Sum_probs=186.8
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCCCCCCCcCCCCCHHHHH
Q 012212 6 HVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDGLELQAADREDPLKLG 85 (468)
Q Consensus 6 ~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 85 (468)
+|++...+..||......||+.|.++||+|++++....... .. ....++++..++..... .......+
T Consensus 1 ~~~~~~~~~gG~~~~~~~la~~l~~~G~ev~v~~~~~~~~~-~~-------~~~~~~~~~~~~~~~~~----~~~~~~~~ 68 (350)
T cd03785 1 RILIAGGGTGGHIFPALALAEELRERGAEVLFLGTKRGLEA-RL-------VPKAGIPLHTIPVGGLR----RKGSLKKL 68 (350)
T ss_pred CEEEEecCchhhhhHHHHHHHHHHhCCCEEEEEECCCcchh-hc-------ccccCCceEEEEecCcC----CCChHHHH
Confidence 57888888889999999999999999999999988643211 10 11134666666532111 11112212
Q ss_pred HHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCcc--cHHHHHHHhCCceEEEcccchHHHHHHhhhhhHhhcCCCCC
Q 012212 86 ESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVG--SALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGIIDP 163 (468)
Q Consensus 86 ~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~ 163 (468)
..+..... .+..+.+.+++ .+||+|++..... .+..+|...++|+++.....
T Consensus 69 ~~~~~~~~-~~~~~~~~i~~----~~pDvI~~~~~~~~~~~~~~a~~~~~p~v~~~~~~--------------------- 122 (350)
T cd03785 69 KAPFKLLK-GVLQARKILKK----FKPDVVVGFGGYVSGPVGLAAKLLGIPLVIHEQNA--------------------- 122 (350)
T ss_pred HHHHHHHH-HHHHHHHHHHh----cCCCEEEECCCCcchHHHHHHHHhCCCEEEEcCCC---------------------
Confidence 11111111 12223333333 5799999875332 45677888899988632100
Q ss_pred CCcccccCCcccccCCCccCcccccCcCCCCCChhHHHHHHHHHHHHHhhccccEEEEcCcccCChhhhccCCCceeecc
Q 012212 164 NGFAILNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACDLIPNILPIGP 243 (468)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~~~~~p~v~~vGp 243 (468)
+ ++ ....+ ....++.++..+....++ -...++.++|.
T Consensus 123 --~-----------~~----------------------~~~~~-----~~~~~~~vi~~s~~~~~~---~~~~~~~~i~n 159 (350)
T cd03785 123 --V-----------PG----------------------LANRL-----LARFADRVALSFPETAKY---FPKDKAVVTGN 159 (350)
T ss_pred --C-----------cc----------------------HHHHH-----HHHhhCEEEEcchhhhhc---CCCCcEEEECC
Confidence 0 00 00000 011245666555433332 01235666775
Q ss_pred ccCCCCCCCCCCCCCCCCCchhhhhhcccCccEEEEEecccccCC-HHHHHHHHHHHHhCCCCEEEEEcCCCCCCcccCC
Q 012212 244 LLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLS-QQQFAELALGLESLQKPFLWVIRQDFMNGSRAKF 322 (468)
Q Consensus 244 l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~-~~~~~~~~~a~~~~~~~~l~~~~~~~~~~~~~~~ 322 (468)
........ .... ...+...+++++|++..|+..... .+++..++..+.+.+..+++.++.+ .
T Consensus 160 ~v~~~~~~--------~~~~-~~~~~~~~~~~~i~~~~g~~~~~~~~~~l~~a~~~l~~~~~~~~~i~G~g----~---- 222 (350)
T cd03785 160 PVREEILA--------LDRE-RARLGLRPGKPTLLVFGGSQGARAINEAVPEALAELLRKRLQVIHQTGKG----D---- 222 (350)
T ss_pred CCchHHhh--------hhhh-HHhcCCCCCCeEEEEECCcHhHHHHHHHHHHHHHHhhccCeEEEEEcCCc----c----
Confidence 44322111 0000 112222234446666555542211 1122233333432233445555433 1
Q ss_pred chhHHHHh---CCCceEEccc-ChHHHhcCCCCCceeeccCchhHHHhhhcCCceecccc----ccchhhhHHHHHHHhh
Q 012212 323 PDGFIERV---SNRGKIVEWA-PQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPY----FSDQYQNRNYICEAWK 394 (468)
Q Consensus 323 ~~~~~~~~---~~nv~~~~~~-p~~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~----~~DQ~~na~rv~~~lG 394 (468)
.+.+.+.. .+|+++.+|+ ....++..+++ +|+++|.+|+.||+++|+|+|++|. ..+|..|+..+.+. |
T Consensus 223 ~~~l~~~~~~~~~~v~~~g~~~~~~~~l~~ad~--~v~~sg~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~~l~~~-g 299 (350)
T cd03785 223 LEEVKKAYEELGVNYEVFPFIDDMAAAYAAADL--VISRAGASTVAELAALGLPAILIPLPYAADDHQTANARALVKA-G 299 (350)
T ss_pred HHHHHHHHhccCCCeEEeehhhhHHHHHHhcCE--EEECCCHhHHHHHHHhCCCEEEeecCCCCCCcHHHhHHHHHhC-C
Confidence 12222222 4689999998 55778865555 9999999999999999999999985 46899999999995 9
Q ss_pred ceeEeeccCCCccCHHHHHHHHHHHhcChHHHHHHHHHH
Q 012212 395 IGLQFFADENGIITRQEIQRKVLTLLKNDDIRSNSLKLK 433 (468)
Q Consensus 395 ~g~~l~~~~~~~~t~~~l~~ai~~~l~~~~~r~~a~~l~ 433 (468)
.|+.++..+ .+.+++.++|+++++|++.+++..+-+
T Consensus 300 ~g~~v~~~~---~~~~~l~~~i~~ll~~~~~~~~~~~~~ 335 (350)
T cd03785 300 AAVLIPQEE---LTPERLAAALLELLSDPERLKAMAEAA 335 (350)
T ss_pred CEEEEecCC---CCHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 999998765 689999999999999887665444433
|
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >COG4671 Predicted glycosyl transferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.85 E-value=2e-18 Score=154.24 Aligned_cols=329 Identities=14% Similarity=0.118 Sum_probs=208.0
Q ss_pred CCCCEEEEEcCC--CccChHHHHHHHHHHHHC--CCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCCCCCCCcC-
Q 012212 2 SRQPHVLVIPYP--AQGHVAPLMKLATKIAER--AIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDGLELQAA- 76 (468)
Q Consensus 2 ~~~~~Il~~~~~--~~GH~~p~~~LA~~L~~r--GH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~- 76 (468)
.+++||+|++-- |.||+..+..||++|++. |.+|+++|+.+-..... .+.+++++.+|........
T Consensus 7 ~~~~Ri~~Yshd~~GlGHlrR~~~Ia~aLv~d~~~~~Il~IsG~~~~~~F~---------~~~gVd~V~LPsl~k~~~G~ 77 (400)
T COG4671 7 SKRPRILFYSHDLLGLGHLRRALRIAHALVEDYLGFDILIISGGPPAGGFP---------GPAGVDFVKLPSLIKGDNGE 77 (400)
T ss_pred hccceEEEEehhhccchHHHHHHHHHHHHhhcccCceEEEEeCCCccCCCC---------CcccCceEecCceEecCCCc
Confidence 456799999765 569999999999999988 99999999987655542 2378999999953322211
Q ss_pred -CCCCHHHHHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCcccHH-----HHHHHh--CCceEEEcccchHHHHH
Q 012212 77 -DREDPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVGSAL-----EVAESM--GIARAAVVPFGPGSLAL 148 (468)
Q Consensus 77 -~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~~~~-----~~A~~l--giP~v~~~~~~~~~~~~ 148 (468)
...+...-...+.+...+.+...++. .+||++|+|.+.++.. .+++.- +-+++..
T Consensus 78 ~~~~d~~~~l~e~~~~Rs~lil~t~~~-------fkPDi~IVd~~P~Glr~EL~ptL~yl~~~~t~~vL~---------- 140 (400)
T COG4671 78 YGLVDLDGDLEETKKLRSQLILSTAET-------FKPDIFIVDKFPFGLRFELLPTLEYLKTTGTRLVLG---------- 140 (400)
T ss_pred eeeeecCCCHHHHHHHHHHHHHHHHHh-------cCCCEEEEeccccchhhhhhHHHHHHhhcCCcceee----------
Confidence 11111111444444445545555555 6799999998766411 111111 1001000
Q ss_pred HhhhhhHhhcCCCCCCCcccccCCcccccCCCccCcccccCcCCCCCChhHHHHHHHHHHHHHhhccccEEEEcCcccCC
Q 012212 149 SLQFPKLLEAGIIDPNGFAILNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELD 228 (468)
Q Consensus 149 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le 228 (468)
.. ..++.+ ......-.......... +..|.+++..+|.|-
T Consensus 141 -----------lr----------------------~i~D~p-~~~~~~w~~~~~~~~I~------r~yD~V~v~GdP~f~ 180 (400)
T COG4671 141 -----------LR----------------------SIRDIP-QELEADWRRAETVRLIN------RFYDLVLVYGDPDFY 180 (400)
T ss_pred -----------hH----------------------hhhhch-hhhccchhhhHHHHHHH------HhheEEEEecCcccc
Confidence 00 001111 00000000011111111 145888999998876
Q ss_pred hhhhcc--C----CCceeeccccCCCCCCCCCCCCCCCCCchhhhhhcccCccEEEEEecccccCCHHHHHHHHHHHHh-
Q 012212 229 SPACDL--I----PNILPIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALGLES- 301 (468)
Q Consensus 229 ~~~~~~--~----p~v~~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~a~~~- 301 (468)
-+...+ . .++.|+|-+..+ .+.. ...|+. .+++..|+||-|... ...+++...+.|-..
T Consensus 181 d~~~~~~~~~~i~~k~~ytG~vq~~--~~~~-~~p~~~----------~pE~~~Ilvs~GGG~-dG~eLi~~~l~A~~~l 246 (400)
T COG4671 181 DPLTEFPFAPAIRAKMRYTGFVQRS--LPHL-PLPPHE----------APEGFDILVSVGGGA-DGAELIETALAAAQLL 246 (400)
T ss_pred ChhhcCCccHhhhhheeEeEEeecc--CcCC-CCCCcC----------CCccceEEEecCCCh-hhHHHHHHHHHHhhhC
Confidence 553222 2 378999988332 1110 000111 133347999998854 367788888877654
Q ss_pred CCCC--EEEEEcCCCCCCcccCCchhHHHHh----C--CCceEEcccCh-HHHhcCCCCCceeeccCchhHHHhhhcCCc
Q 012212 302 LQKP--FLWVIRQDFMNGSRAKFPDGFIERV----S--NRGKIVEWAPQ-EKVLGHSSVACFISHCGWNSTMEGLSMGVP 372 (468)
Q Consensus 302 ~~~~--~l~~~~~~~~~~~~~~~~~~~~~~~----~--~nv~~~~~~p~-~~ll~~~~~~~~I~hGG~~s~~eal~~GvP 372 (468)
.+.+ .++++++ .+|.....+. + +++.+..|.-+ ..++.-++. +|+-||+||++|-|.+|+|
T Consensus 247 ~~l~~~~~ivtGP--------~MP~~~r~~l~~~A~~~p~i~I~~f~~~~~~ll~gA~~--vVSm~GYNTvCeILs~~k~ 316 (400)
T COG4671 247 AGLNHKWLIVTGP--------FMPEAQRQKLLASAPKRPHISIFEFRNDFESLLAGARL--VVSMGGYNTVCEILSFGKP 316 (400)
T ss_pred CCCCcceEEEeCC--------CCCHHHHHHHHHhcccCCCeEEEEhhhhHHHHHHhhhe--eeecccchhhhHHHhCCCc
Confidence 3334 4444443 4666554433 4 78888999866 668865655 9999999999999999999
Q ss_pred eeccccc---cchhhhHHHHHHHhhceeEeeccCCCccCHHHHHHHHHHHhcChH
Q 012212 373 FLCWPYF---SDQYQNRNYICEAWKIGLQFFADENGIITRQEIQRKVLTLLKNDD 424 (468)
Q Consensus 373 ~v~~P~~---~DQ~~na~rv~~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~~~ 424 (468)
.+++|.. .||-..|.|+++ ||+.-++..++ +|++.++++|...++-|+
T Consensus 317 aLivPr~~p~eEQliRA~Rl~~-LGL~dvL~pe~---lt~~~La~al~~~l~~P~ 367 (400)
T COG4671 317 ALIVPRAAPREEQLIRAQRLEE-LGLVDVLLPEN---LTPQNLADALKAALARPS 367 (400)
T ss_pred eEEeccCCCcHHHHHHHHHHHh-cCcceeeCccc---CChHHHHHHHHhcccCCC
Confidence 9999973 599999999999 89999999988 999999999999998554
|
|
| >TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.2e-16 Score=153.85 Aligned_cols=320 Identities=15% Similarity=0.143 Sum_probs=173.9
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCCCCCCCcCCCCCHHHH
Q 012212 5 PHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDGLELQAADREDPLKL 84 (468)
Q Consensus 5 ~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 84 (468)
|||+|+..+..||+.....||++|.++||+|++++.+..... .. ....+++++.++..... ...+...
T Consensus 1 ~~i~~~~g~~~g~~~~~~~La~~L~~~g~eV~vv~~~~~~~~--~~------~~~~g~~~~~i~~~~~~----~~~~~~~ 68 (348)
T TIGR01133 1 KKVVLAAGGTGGHIFPALAVAEELIKRGVEVLWLGTKRGLEK--RL------VPKAGIEFYFIPVGGLR----RKGSFRL 68 (348)
T ss_pred CeEEEEeCccHHHHhHHHHHHHHHHhCCCEEEEEeCCCcchh--cc------cccCCCceEEEeccCcC----CCChHHH
Confidence 489999999999999888999999999999999987542110 00 00135666665532111 1122222
Q ss_pred HHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCcc--cHHHHHHHhCCceEEEcccchHHHHHHhhhhhHhhcCCCC
Q 012212 85 GESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVG--SALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGIID 162 (468)
Q Consensus 85 ~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~ 162 (468)
+....... ..+..+.+.+++ .+||+|++..... .+..++..+++|++.......
T Consensus 69 l~~~~~~~-~~~~~l~~~i~~----~~pDvVi~~~~~~~~~~~~~~~~~~~p~v~~~~~~~------------------- 124 (348)
T TIGR01133 69 IKTPLKLL-KAVFQARRILKK----FKPDAVIGFGGYVSGPAGLAAKLLGIPLFHHEQNAV------------------- 124 (348)
T ss_pred HHHHHHHH-HHHHHHHHHHHh----cCCCEEEEcCCcccHHHHHHHHHcCCCEEEECCCCC-------------------
Confidence 22222111 123333333443 6799999985433 344568888999874321000
Q ss_pred CCCcccccCCcccccCCCccCcccccCcCCCCCChhHHHHHHHHHHHHHhhccccEEEEcCcccCChhhhccCCCceeec
Q 012212 163 PNGFAILNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACDLIPNILPIG 242 (468)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~~~~~p~v~~vG 242 (468)
+ . .. . +.. ...+|.++..+...-++. ...++|
T Consensus 125 ---------------~------------~---------~~-~---~~~--~~~~d~ii~~~~~~~~~~------~~~~i~ 156 (348)
T TIGR01133 125 ---------------P------------G---------LT-N---KLL--SRFAKKVLISFPGAKDHF------EAVLVG 156 (348)
T ss_pred ---------------c------------c---------HH-H---HHH--HHHhCeeEECchhHhhcC------CceEEc
Confidence 0 0 00 0 000 113455544443211111 123444
Q ss_pred cccCCCCCCCCCCCCCCCCCchhhhhhcccCccEEEEEecccccCCHHHHHHHHHHHHh---CCCCEEEEEcCCCCCCcc
Q 012212 243 PLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALGLES---LQKPFLWVIRQDFMNGSR 319 (468)
Q Consensus 243 pl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~a~~~---~~~~~l~~~~~~~~~~~~ 319 (468)
.-....... .+.. ...+...++.++|.+.-|+.. .....+.+.+++.. .+.++++..++.
T Consensus 157 n~v~~~~~~--------~~~~-~~~~~~~~~~~~i~~~gg~~~--~~~~~~~l~~a~~~l~~~~~~~~~~~g~~------ 219 (348)
T TIGR01133 157 NPVRQEIRS--------LPVP-RERFGLREGKPTILVLGGSQG--AKILNELVPKALAKLAEKGIQIVHQTGKN------ 219 (348)
T ss_pred CCcCHHHhc--------ccch-hhhcCCCCCCeEEEEECCchh--HHHHHHHHHHHHHHHhhcCcEEEEECCcc------
Confidence 322211000 0000 011222223345544434433 22222223344433 344555444332
Q ss_pred cCCchhHHHHhCC-C-ceEEccc--ChHHHhcCCCCCceeeccCchhHHHhhhcCCceeccccc---cchhhhHHHHHHH
Q 012212 320 AKFPDGFIERVSN-R-GKIVEWA--PQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYF---SDQYQNRNYICEA 392 (468)
Q Consensus 320 ~~~~~~~~~~~~~-n-v~~~~~~--p~~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~~---~DQ~~na~rv~~~ 392 (468)
.. +.+.+...+ + ..++.|. ....++..+++ +|+++|.+++.||+++|+|+|++|.. .+|..|+..+++.
T Consensus 220 -~~-~~l~~~~~~~~l~~~v~~~~~~~~~~l~~ad~--~v~~~g~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~~ 295 (348)
T TIGR01133 220 -DL-EKVKNVYQELGIEAIVTFIDENMAAAYAAADL--VISRAGASTVAELAAAGVPAILIPYPYAADDQYYNAKFLEDL 295 (348)
T ss_pred -hH-HHHHHHHhhCCceEEecCcccCHHHHHHhCCE--EEECCChhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHHC
Confidence 11 222222221 1 1233343 45778866655 99999988999999999999998863 4788899999985
Q ss_pred hhceeEeeccCCCccCHHHHHHHHHHHhcChHHHHHHHHHH
Q 012212 393 WKIGLQFFADENGIITRQEIQRKVLTLLKNDDIRSNSLKLK 433 (468)
Q Consensus 393 lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~~~~r~~a~~l~ 433 (468)
|.|..++..+ .+.++|.++++++++|++++++..+-+
T Consensus 296 -~~G~~~~~~~---~~~~~l~~~i~~ll~~~~~~~~~~~~~ 332 (348)
T TIGR01133 296 -GAGLVIRQKE---LLPEKLLEALLKLLLDPANLEAMAEAA 332 (348)
T ss_pred -CCEEEEeccc---CCHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence 9999987765 689999999999999988765444433
|
RL J Bacteriol 1993 Mar;175(6):1841-3 |
| >TIGR00215 lpxB lipid-A-disaccharide synthase | Back alignment and domain information |
|---|
Probab=99.76 E-value=1e-16 Score=155.10 Aligned_cols=351 Identities=11% Similarity=0.071 Sum_probs=195.5
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCCCCCCCcCCCCCHHHH
Q 012212 5 PHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDGLELQAADREDPLKL 84 (468)
Q Consensus 5 ~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 84 (468)
.||++...++.||++|. +||++|.++|++|+|++.... .+++.|.+ ..+++..++. ..+.+.
T Consensus 6 ~ki~i~aGgtsGhi~pa-al~~~l~~~~~~~~~~g~gg~--~m~~~g~~------~~~~~~~l~v---------~G~~~~ 67 (385)
T TIGR00215 6 PTIALVAGEASGDILGA-GLRQQLKEHYPNARFIGVAGP--RMAAEGCE------VLYSMEELSV---------MGLREV 67 (385)
T ss_pred CeEEEEeCCccHHHHHH-HHHHHHHhcCCCcEEEEEccH--HHHhCcCc------cccChHHhhh---------ccHHHH
Confidence 68999998899999999 999999999999999997643 45553321 1233332221 122222
Q ss_pred HHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCC-cccHHH--HHHHhCCceEEEcccchHHHHHHhhhhhHhhcCCC
Q 012212 85 GESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVT-VGSALE--VAESMGIARAAVVPFGPGSLALSLQFPKLLEAGII 161 (468)
Q Consensus 85 ~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~-~~~~~~--~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~ 161 (468)
+..+... ...+.++.+.+++ .+||+||.=.. .+.... +|+.+|||++.+.+ |- .
T Consensus 68 l~~~~~~-~~~~~~~~~~l~~----~kPd~vi~~g~~~~~~~~a~aa~~~gip~v~~i~-P~-~---------------- 124 (385)
T TIGR00215 68 LGRLGRL-LKIRKEVVQLAKQ----AKPDLLVGIDAPDFNLTKELKKKDPGIKIIYYIS-PQ-V---------------- 124 (385)
T ss_pred HHHHHHH-HHHHHHHHHHHHh----cCCCEEEEeCCCCccHHHHHHHhhCCCCEEEEeC-Cc-H----------------
Confidence 2222221 1223344444444 67999887443 223233 88999999987542 10 0
Q ss_pred CCCCcccccCCcccccCCCccCcccccCcCCCCCChhHHHHHHHHHHHHHhhccccEEEEcCcccCChhhhccCCCceee
Q 012212 162 DPNGFAILNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACDLIPNILPI 241 (468)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~~~~~p~v~~v 241 (468)
|.|.... . .... ..+|.++..+..+-++. ....-+..++
T Consensus 125 ----------------------------waw~~~~--~-r~l~---------~~~d~v~~~~~~e~~~~-~~~g~~~~~v 163 (385)
T TIGR00215 125 ----------------------------WAWRKWR--A-KKIE---------KATDFLLAILPFEKAFY-QKKNVPCRFV 163 (385)
T ss_pred ----------------------------hhcCcch--H-HHHH---------HHHhHhhccCCCcHHHH-HhcCCCEEEE
Confidence 0111100 0 1111 12233333333222221 1222356678
Q ss_pred ccccCCCCCCCCCCCCCCCCCchhhhhhcccCccEEEEEecccccCCHHHHHHHHHHHHhC-----CCCEEEEEcCCCCC
Q 012212 242 GPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALGLESL-----QKPFLWVIRQDFMN 316 (468)
Q Consensus 242 Gpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~a~~~~-----~~~~l~~~~~~~~~ 316 (468)
|.-..+.... ......+..+.+...+++++|.+.-||....-...+..+++++..+ +.++++........
T Consensus 164 GnPv~~~~~~-----~~~~~~~~r~~lgl~~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~~vi~~~~~~~~ 238 (385)
T TIGR00215 164 GHPLLDAIPL-----YKPDRKSAREKLGIDHNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLRRVLPVVNFKRR 238 (385)
T ss_pred CCchhhhccc-----cCCCHHHHHHHcCCCCCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeEEEEEeCCchhH
Confidence 8433221110 0001111112223334556888877886432233445555554432 22344444332000
Q ss_pred CcccCCchhHHHHh--CCCceEEcccChHHHhcCCCCCceeeccCchhHHHhhhcCCceecc----cccc---------c
Q 012212 317 GSRAKFPDGFIERV--SNRGKIVEWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCW----PYFS---------D 381 (468)
Q Consensus 317 ~~~~~~~~~~~~~~--~~nv~~~~~~p~~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~----P~~~---------D 381 (468)
..+ +.+.+.. ..++.+..+ ....++..+++ +|+-.|..|+ |++++|+|+|++ |+.. .
T Consensus 239 ---~~~-~~~~~~~~~~~~v~~~~~-~~~~~l~aADl--~V~~SGt~tl-Ea~a~G~P~Vv~yk~~pl~~~~~~~~~~~~ 310 (385)
T TIGR00215 239 ---LQF-EQIKAEYGPDLQLHLIDG-DARKAMFAADA--ALLASGTAAL-EAALIKTPMVVGYRMKPLTFLIARRLVKTD 310 (385)
T ss_pred ---HHH-HHHHHHhCCCCcEEEECc-hHHHHHHhCCE--EeecCCHHHH-HHHHcCCCEEEEEcCCHHHHHHHHHHHcCC
Confidence 001 1111122 123333322 33557855555 9999999988 999999999999 7632 3
Q ss_pred hhhhHHHHHHHhhceeEeeccCCCccCHHHHHHHHHHHhcCh----HHHHHHHHHHHHHHHHhcCCCchHHHHHHHH
Q 012212 382 QYQNRNYICEAWKIGLQFFADENGIITRQEIQRKVLTLLKND----DIRSNSLKLKEVARKSLLGGGSSFRNFESFI 454 (468)
Q Consensus 382 Q~~na~rv~~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~~----~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~ 454 (468)
|..|+..+... |+...+--++ +|++.|.+++.++|+|+ +++++.+.--.++++...++|.+.++.+.++
T Consensus 311 ~~~~~nil~~~-~~~pel~q~~---~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~i~ 383 (385)
T TIGR00215 311 YISLPNILANR-LLVPELLQEE---CTPHPLAIALLLLLENGLKAYKEMHRERQFFEELRQRIYCNADSERAAQAVL 383 (385)
T ss_pred eeeccHHhcCC-ccchhhcCCC---CCHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHh
Confidence 78899999886 8888887666 99999999999999999 7777666666666665555666666665554
|
Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA |
| >PRK13609 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.4e-15 Score=148.07 Aligned_cols=141 Identities=17% Similarity=0.252 Sum_probs=98.3
Q ss_pred CccEEEEEecccccCCHHHHHHHHHHHHhC-CCCEEEEEcCCCCCCcccCCchhHHH---HhCCCceEEcccCh-HHHhc
Q 012212 273 IRSVVYVAFGSVAVLSQQQFAELALGLESL-QKPFLWVIRQDFMNGSRAKFPDGFIE---RVSNRGKIVEWAPQ-EKVLG 347 (468)
Q Consensus 273 ~~~vv~vs~Gs~~~~~~~~~~~~~~a~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~---~~~~nv~~~~~~p~-~~ll~ 347 (468)
++++|++.-|+.... ..+..+++++.+. +.+++++.+.. ..+.+.+.+ ..++|+++.+|+++ .+++.
T Consensus 201 ~~~~il~~~G~~~~~--k~~~~li~~l~~~~~~~~viv~G~~------~~~~~~l~~~~~~~~~~v~~~g~~~~~~~l~~ 272 (380)
T PRK13609 201 NKKILLIMAGAHGVL--GNVKELCQSLMSVPDLQVVVVCGKN------EALKQSLEDLQETNPDALKVFGYVENIDELFR 272 (380)
T ss_pred CCcEEEEEcCCCCCC--cCHHHHHHHHhhCCCcEEEEEeCCC------HHHHHHHHHHHhcCCCcEEEEechhhHHHHHH
Confidence 445777766776421 2345667777554 34555555432 111122222 22458899999987 57887
Q ss_pred CCCCCceeeccCchhHHHhhhcCCceecc-ccccchhhhHHHHHHHhhceeEeeccCCCccCHHHHHHHHHHHhcChHHH
Q 012212 348 HSSVACFISHCGWNSTMEGLSMGVPFLCW-PYFSDQYQNRNYICEAWKIGLQFFADENGIITRQEIQRKVLTLLKNDDIR 426 (468)
Q Consensus 348 ~~~~~~~I~hGG~~s~~eal~~GvP~v~~-P~~~DQ~~na~rv~~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~~~~r 426 (468)
.+++ +|+.+|..|+.||+++|+|+|+. |..+.|..|+..+.+. |+|+.. -+.+++.++|.++++|++.+
T Consensus 273 ~aD~--~v~~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~~-G~~~~~-------~~~~~l~~~i~~ll~~~~~~ 342 (380)
T PRK13609 273 VTSC--MITKPGGITLSEAAALGVPVILYKPVPGQEKENAMYFERK-GAAVVI-------RDDEEVFAKTEALLQDDMKL 342 (380)
T ss_pred hccE--EEeCCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHhC-CcEEEE-------CCHHHHHHHHHHHHCCHHHH
Confidence 7766 99999988999999999999985 6667778899988885 888754 35789999999999998866
Q ss_pred HHHHH
Q 012212 427 SNSLK 431 (468)
Q Consensus 427 ~~a~~ 431 (468)
++..+
T Consensus 343 ~~m~~ 347 (380)
T PRK13609 343 LQMKE 347 (380)
T ss_pred HHHHH
Confidence 55443
|
|
| >TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG | Back alignment and domain information |
|---|
Probab=99.73 E-value=8.5e-16 Score=141.79 Aligned_cols=103 Identities=16% Similarity=0.135 Sum_probs=75.3
Q ss_pred cEEEEEecccccCCHHHHHHHHHHHHhC--CCCEEEEEcCCCCCCcccCCchhHHHH--hCCCceEEcccCh-HHHhcCC
Q 012212 275 SVVYVAFGSVAVLSQQQFAELALGLESL--QKPFLWVIRQDFMNGSRAKFPDGFIER--VSNRGKIVEWAPQ-EKVLGHS 349 (468)
Q Consensus 275 ~vv~vs~Gs~~~~~~~~~~~~~~a~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~nv~~~~~~p~-~~ll~~~ 349 (468)
+.|++++|.... ......+++++.+. +.++.++++.. .+..+.+.+. ..+|+++..++++ ..+|..+
T Consensus 171 ~~iLi~~GG~d~--~~~~~~~l~~l~~~~~~~~i~vv~G~~------~~~~~~l~~~~~~~~~i~~~~~~~~m~~lm~~a 242 (279)
T TIGR03590 171 RRVLVSFGGADP--DNLTLKLLSALAESQINISITLVTGSS------NPNLDELKKFAKEYPNIILFIDVENMAELMNEA 242 (279)
T ss_pred CeEEEEeCCcCC--cCHHHHHHHHHhccccCceEEEEECCC------CcCHHHHHHHHHhCCCEEEEeCHHHHHHHHHHC
Confidence 479999997632 22445666777654 34677777654 1222333322 2468898899987 5799666
Q ss_pred CCCceeeccCchhHHHhhhcCCceeccccccchhhhHHH
Q 012212 350 SVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNY 388 (468)
Q Consensus 350 ~~~~~I~hGG~~s~~eal~~GvP~v~~P~~~DQ~~na~r 388 (468)
++ +|++|| +|++|+++.|+|+|++|+..+|..||+.
T Consensus 243 Dl--~Is~~G-~T~~E~~a~g~P~i~i~~~~nQ~~~a~~ 278 (279)
T TIGR03590 243 DL--AIGAAG-STSWERCCLGLPSLAICLAENQQSNSQQ 278 (279)
T ss_pred CE--EEECCc-hHHHHHHHcCCCEEEEEecccHHHHhhh
Confidence 55 999999 9999999999999999999999999975
|
This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases. |
| >PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=99.65 E-value=2e-14 Score=140.18 Aligned_cols=350 Identities=14% Similarity=0.097 Sum_probs=172.4
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCCCCCCCcCCCCCHHH
Q 012212 4 QPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDGLELQAADREDPLK 83 (468)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 83 (468)
+|||++...+..||++|.. ++++|.++++++.++..... .+++.+.+ ..+.++.++ ...+..
T Consensus 1 ~~ki~i~~Ggt~G~i~~a~-l~~~L~~~~~~~~~~~~~~~--~~~~~~~~------~~~~~~~l~---------~~g~~~ 62 (380)
T PRK00025 1 PLRIAIVAGEVSGDLLGAG-LIRALKARAPNLEFVGVGGP--RMQAAGCE------SLFDMEELA---------VMGLVE 62 (380)
T ss_pred CceEEEEecCcCHHHHHHH-HHHHHHhcCCCcEEEEEccH--HHHhCCCc------cccCHHHhh---------hccHHH
Confidence 4689999999999999998 99999999888888875442 34432211 112222222 111222
Q ss_pred HHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCC-cccH--HHHHHHhCCceEEEcccchHHHHHHhhhhhHhhcCC
Q 012212 84 LGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVT-VGSA--LEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGI 160 (468)
Q Consensus 84 ~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~-~~~~--~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~ 160 (468)
.+..+.... ..+..+.+.++. .+||+|+.-.. ..+. ...|...|||++.+.....+
T Consensus 63 ~~~~~~~~~-~~~~~~~~~l~~----~kPdivi~~~~~~~~~~~a~~a~~~~ip~i~~~~~~~~---------------- 121 (380)
T PRK00025 63 VLPRLPRLL-KIRRRLKRRLLA----EPPDVFIGIDAPDFNLRLEKKLRKAGIPTIHYVSPSVW---------------- 121 (380)
T ss_pred HHHHHHHHH-HHHHHHHHHHHH----cCCCEEEEeCCCCCCHHHHHHHHHCCCCEEEEeCCchh----------------
Confidence 222221111 123333333433 67999877332 2233 33467789998765321000
Q ss_pred CCCCCcccccCCcccccCCCccCcccccCcCCCCCChhHHHHHHHHHHHHHhhccccEEEEcCcccCChhhhccCCCcee
Q 012212 161 IDPNGFAILNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACDLIPNILP 240 (468)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~~~~~p~v~~ 240 (468)
.+.. ...... ...+|.++..+...-+.. ....-++.+
T Consensus 122 ------------------------------~~~~--~~~~~~----------~~~~d~i~~~~~~~~~~~-~~~g~~~~~ 158 (380)
T PRK00025 122 ------------------------------AWRQ--GRAFKI----------AKATDHVLALFPFEAAFY-DKLGVPVTF 158 (380)
T ss_pred ------------------------------hcCc--hHHHHH----------HHHHhhheeCCccCHHHH-HhcCCCeEE
Confidence 0000 000000 112344444443222221 112223666
Q ss_pred eccccCCCCCCCCCCCCCCCCCchhhhhhcccCccEEEEEecccccCCHHHHHHHHHHHHhC-----CCCEEEEEcCCCC
Q 012212 241 IGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALGLESL-----QKPFLWVIRQDFM 315 (468)
Q Consensus 241 vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~a~~~~-----~~~~l~~~~~~~~ 315 (468)
+|....+..... .....+...+.-.+++++|++..||........+..+++++..+ +.+++++.+..
T Consensus 159 ~G~p~~~~~~~~------~~~~~~~~~l~~~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~~ii~~~~~-- 230 (380)
T PRK00025 159 VGHPLADAIPLL------PDRAAARARLGLDPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLRFVLPLVNP-- 230 (380)
T ss_pred ECcCHHHhcccc------cChHHHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCCh--
Confidence 773222211000 01111222222223445666666665332223344555554322 22455543322
Q ss_pred CCcccCCchhHHHHhC----CCceEEcccChHHHhcCCCCCceeeccCchhHHHhhhcCCceecccccc--------chh
Q 012212 316 NGSRAKFPDGFIERVS----NRGKIVEWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFS--------DQY 383 (468)
Q Consensus 316 ~~~~~~~~~~~~~~~~----~nv~~~~~~p~~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~~~--------DQ~ 383 (468)
...+.+.+... -++.+.+- ....+++.+++ +|+-+|.+++ |++++|+|+|++|... .|.
T Consensus 231 -----~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~~aDl--~v~~sG~~~l-Ea~a~G~PvI~~~~~~~~~~~~~~~~~ 301 (380)
T PRK00025 231 -----KRREQIEEALAEYAGLEVTLLDG-QKREAMAAADA--ALAASGTVTL-ELALLKVPMVVGYKVSPLTFWIAKRLV 301 (380)
T ss_pred -----hhHHHHHHHHhhcCCCCeEEEcc-cHHHHHHhCCE--EEECccHHHH-HHHHhCCCEEEEEccCHHHHHHHHHHH
Confidence 11122222221 23444321 23567766655 9999998887 9999999999985321 121
Q ss_pred hh-----HHHHHHHhhceeEeeccCCCccCHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHH
Q 012212 384 QN-----RNYICEAWKIGLQFFADENGIITRQEIQRKVLTLLKNDDIRSNSLKLKEVARKSLLGGGSSFRNFESFISDI 457 (468)
Q Consensus 384 ~n-----a~rv~~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 457 (468)
.| +..+... |++..+.... .+++.+.+++.++|+|++.+++..+-.+.++... ..|.+.+.++.+.+.+
T Consensus 302 ~~~~~~l~~~~~~~-~~~~~~~~~~---~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~-~~~a~~~~~~~i~~~~ 375 (380)
T PRK00025 302 KVPYVSLPNLLAGR-ELVPELLQEE---ATPEKLARALLPLLADGARRQALLEGFTELHQQL-RCGADERAAQAVLELL 375 (380)
T ss_pred cCCeeehHHHhcCC-CcchhhcCCC---CCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHh-CCCHHHHHHHHHHHHh
Confidence 22 2222222 3333333344 7899999999999999987766555554444432 3454545544444443
|
|
| >PRK13608 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=5.3e-14 Score=137.03 Aligned_cols=163 Identities=13% Similarity=0.197 Sum_probs=106.7
Q ss_pred CccEEEEEecccccCCHHHHHHHHHHHHh-C-CCCEEEEEcCCCCCCcccCCchhHHHHh--CCCceEEcccCh-HHHhc
Q 012212 273 IRSVVYVAFGSVAVLSQQQFAELALGLES-L-QKPFLWVIRQDFMNGSRAKFPDGFIERV--SNRGKIVEWAPQ-EKVLG 347 (468)
Q Consensus 273 ~~~vv~vs~Gs~~~~~~~~~~~~~~a~~~-~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~nv~~~~~~p~-~~ll~ 347 (468)
++++|+++.|+... ...+..+++++.+ . +.+++++.+.. ..+-+.+.+.. .+++.+.+|+.+ .+++.
T Consensus 201 ~~~~ilv~~G~lg~--~k~~~~li~~~~~~~~~~~~vvv~G~~------~~l~~~l~~~~~~~~~v~~~G~~~~~~~~~~ 272 (391)
T PRK13608 201 DKQTILMSAGAFGV--SKGFDTMITDILAKSANAQVVMICGKS------KELKRSLTAKFKSNENVLILGYTKHMNEWMA 272 (391)
T ss_pred CCCEEEEECCCccc--chhHHHHHHHHHhcCCCceEEEEcCCC------HHHHHHHHHHhccCCCeEEEeccchHHHHHH
Confidence 45688888888642 2345555555432 2 34555554433 11112222222 357888899965 56886
Q ss_pred CCCCCceeeccCchhHHHhhhcCCceecc-ccccchhhhHHHHHHHhhceeEeeccCCCccCHHHHHHHHHHHhcChHHH
Q 012212 348 HSSVACFISHCGWNSTMEGLSMGVPFLCW-PYFSDQYQNRNYICEAWKIGLQFFADENGIITRQEIQRKVLTLLKNDDIR 426 (468)
Q Consensus 348 ~~~~~~~I~hGG~~s~~eal~~GvP~v~~-P~~~DQ~~na~rv~~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~~~~r 426 (468)
.+++ +|+.+|..|+.||+++|+|+|++ |..+.|..|+..+++. |+|+.. -+.+++.++|.++++|++.+
T Consensus 273 ~aDl--~I~k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~-G~g~~~-------~~~~~l~~~i~~ll~~~~~~ 342 (391)
T PRK13608 273 SSQL--MITKPGGITISEGLARCIPMIFLNPAPGQELENALYFEEK-GFGKIA-------DTPEEAIKIVASLTNGNEQL 342 (391)
T ss_pred hhhE--EEeCCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhC-CcEEEe-------CCHHHHHHHHHHHhcCHHHH
Confidence 6655 99998888999999999999998 6666778999999996 999875 36888999999999988644
Q ss_pred HHHHHHHHHHHHHhcCCCchHHHHHHHHHHH
Q 012212 427 SNSLKLKEVARKSLLGGGSSFRNFESFISDI 457 (468)
Q Consensus 427 ~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 457 (468)
+ ++++..+.. ....+....++.+++.+
T Consensus 343 ~---~m~~~~~~~-~~~~s~~~i~~~l~~l~ 369 (391)
T PRK13608 343 T---NMISTMEQD-KIKYATQTICRDLLDLI 369 (391)
T ss_pred H---HHHHHHHHh-cCCCCHHHHHHHHHHHh
Confidence 3 444555443 22344444444444433
|
|
| >PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.1e-16 Score=136.67 Aligned_cols=141 Identities=15% Similarity=0.211 Sum_probs=96.7
Q ss_pred EEEEEecccccC-CHHHHHHHHHHHHh--CCCCEEEEEcCCCCCCcccCCchhHHHHhCCCceEEcccC-hHHHhcCCCC
Q 012212 276 VVYVAFGSVAVL-SQQQFAELALGLES--LQKPFLWVIRQDFMNGSRAKFPDGFIERVSNRGKIVEWAP-QEKVLGHSSV 351 (468)
Q Consensus 276 vv~vs~Gs~~~~-~~~~~~~~~~a~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p-~~~ll~~~~~ 351 (468)
+|+|+.||.... -...+..+...+.. ...+++++++.. ........+ +....|+++.+|++ ..+++..+++
T Consensus 1 tilv~gGs~g~~~l~~~v~~~~~~~~~~~~~~~viv~~G~~----~~~~~~~~~-~~~~~~v~~~~~~~~m~~~m~~aDl 75 (167)
T PF04101_consen 1 TILVTGGSQGARDLNRLVLKILELLAEKHKNIQVIVQTGKN----NYEELKIKV-ENFNPNVKVFGFVDNMAELMAAADL 75 (167)
T ss_dssp -EEEEETTTSHHHHHCCCCCHHHHHHHHHHHCCCCCCCTTC----ECHHHCCCH-CCTTCCCEEECSSSSHHHHHHHHSE
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHhhcCCCcEEEEEECCC----cHHHHHHHH-hccCCcEEEEechhhHHHHHHHcCE
Confidence 589999986321 01111222333322 245677777655 111111111 11136889999999 7889977766
Q ss_pred CceeeccCchhHHHhhhcCCceecccccc----chhhhHHHHHHHhhceeEeeccCCCccCHHHHHHHHHHHhcChHHHH
Q 012212 352 ACFISHCGWNSTMEGLSMGVPFLCWPYFS----DQYQNRNYICEAWKIGLQFFADENGIITRQEIQRKVLTLLKNDDIRS 427 (468)
Q Consensus 352 ~~~I~hGG~~s~~eal~~GvP~v~~P~~~----DQ~~na~rv~~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~~~~r~ 427 (468)
+|||||.||++|++++|+|+|++|... +|..||..+++. |.|+.+.... .+.+.|.++|.+++.++..+.
T Consensus 76 --vIs~aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~-g~~~~~~~~~---~~~~~L~~~i~~l~~~~~~~~ 149 (167)
T PF04101_consen 76 --VISHAGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKK-GAAIMLDESE---LNPEELAEAIEELLSDPEKLK 149 (167)
T ss_dssp --EEECS-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHC-CCCCCSECCC----SCCCHHHHHHCHCCCHH-SH
T ss_pred --EEeCCCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHc-CCccccCccc---CCHHHHHHHHHHHHcCcHHHH
Confidence 999999999999999999999999988 999999999995 9999999887 889999999999999888533
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B. |
| >PLN02605 monogalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.55 E-value=2.9e-12 Score=124.64 Aligned_cols=94 Identities=23% Similarity=0.300 Sum_probs=74.7
Q ss_pred CCceEEcccCh-HHHhcCCCCCceeeccCchhHHHhhhcCCceeccccccchh-hhHHHHHHHhhceeEeeccCCCccCH
Q 012212 332 NRGKIVEWAPQ-EKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQY-QNRNYICEAWKIGLQFFADENGIITR 409 (468)
Q Consensus 332 ~nv~~~~~~p~-~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~~~DQ~-~na~rv~~~lG~g~~l~~~~~~~~t~ 409 (468)
.++++.+|+++ .+++..+++ +|+.+|.+|+.||+++|+|+|+.+....|. .|+..+.+. |.|+.+ -++
T Consensus 265 ~~v~~~G~~~~~~~l~~aaDv--~V~~~g~~ti~EAma~g~PvI~~~~~pgqe~gn~~~i~~~-g~g~~~-------~~~ 334 (382)
T PLN02605 265 IPVKVRGFVTNMEEWMGACDC--IITKAGPGTIAEALIRGLPIILNGYIPGQEEGNVPYVVDN-GFGAFS-------ESP 334 (382)
T ss_pred CCeEEEeccccHHHHHHhCCE--EEECCCcchHHHHHHcCCCEEEecCCCccchhhHHHHHhC-Cceeec-------CCH
Confidence 46788899986 668865655 999999999999999999999998766675 799889886 999764 368
Q ss_pred HHHHHHHHHHhcC-hHHHHHHHHHHHHHHH
Q 012212 410 QEIQRKVLTLLKN-DDIRSNSLKLKEVARK 438 (468)
Q Consensus 410 ~~l~~ai~~~l~~-~~~r~~a~~l~~~~~~ 438 (468)
+++.++|.++++| ++.+++ +++..+.
T Consensus 335 ~~la~~i~~ll~~~~~~~~~---m~~~~~~ 361 (382)
T PLN02605 335 KEIARIVAEWFGDKSDELEA---MSENALK 361 (382)
T ss_pred HHHHHHHHHHHcCCHHHHHH---HHHHHHH
Confidence 9999999999988 654443 4444444
|
|
| >TIGR03492 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.8e-11 Score=117.37 Aligned_cols=334 Identities=11% Similarity=0.007 Sum_probs=177.4
Q ss_pred CccChHHHHHHHHHHHH--CCCEEE---EEECCcchHHHHHhhhhhccCCCCCeEEEEcCCCCCCCcCCCCCHHHHHHHH
Q 012212 14 AQGHVAPLMKLATKIAE--RAIKVT---VVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDGLELQAADREDPLKLGESV 88 (468)
Q Consensus 14 ~~GH~~p~~~LA~~L~~--rGH~Vt---~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (468)
|.|-=.-.++||++|.+ .|++|. |++..... ++.. ....+ .+..+|.+-- ...++...+...
T Consensus 6 ghged~~a~ai~~~l~~~~~~~~v~~~p~vG~~~~~---e~~~-----ip~~g-~~~~~~sgg~----~~~~~~~~~~~~ 72 (396)
T TIGR03492 6 GHGEDLIAARIAKALLQLSPDLNLEALPLVGEGRAY---QNLG-----IPIIG-PTKELPSGGF----SYQSLRGLLRDL 72 (396)
T ss_pred CchHHHHHHHHHHHHHhhCCCCCeEEeCcccCCHHH---hhCC-----CceeC-CCCCCCCCCc----cCCCHHHHHHHH
Confidence 44444567789999998 699999 99887543 2211 11122 4444443221 223344444444
Q ss_pred HH-HhhHHHHHHHHHHhhCCCCCCceEEEecCCcccHHHHHHHhCCceEEEcccchHHHHHHhhhhhHhhcCCCCCCCcc
Q 012212 89 AR-AMRGCLRDLIEKINQSNDCEPIRCVIADVTVGSALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGIIDPNGFA 167 (468)
Q Consensus 89 ~~-~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 167 (468)
.. .... +...+..+++.. .+||+||.=.-+. ...+|...|+|++++.+.-..... .+..++
T Consensus 73 ~~gl~~~-~~~~~~~~~~~~--~~p~~v~~~Gg~v-~~~aA~~~~~p~~~~~~~esn~~~-------------~~~~~~- 134 (396)
T TIGR03492 73 RAGLVGL-TLGQWRALRKWA--KKGDLIVAVGDIV-PLLFAWLSGKPYAFVGTAKSDYYW-------------ESGPRR- 134 (396)
T ss_pred HhhHHHH-HHHHHHHHHHHh--hcCCEEEEECcHH-HHHHHHHcCCCceEEEeeccceee-------------cCCCCC-
Confidence 43 2222 222222333321 2699999876655 888999999999986542221100 000000
Q ss_pred cccCCcccccCCCccCcccccCcCCCCCChhHHHHHHHHHHHHHhhccccEEEEcCcccCChhhhccCCCceeeccccCC
Q 012212 168 ILNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACDLIPNILPIGPLLAS 247 (468)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~~~~~p~v~~vGpl~~~ 247 (468)
...+...-++|... .+| . +..+. .+.++.++..+...-++. ....-++.++|--..+
T Consensus 135 -~~~~~~~~~~G~~~-----~p~---e----~n~l~---------~~~a~~v~~~~~~t~~~l-~~~g~k~~~vGnPv~d 191 (396)
T TIGR03492 135 -SPSDEYHRLEGSLY-----LPW---E----RWLMR---------SRRCLAVFVRDRLTARDL-RRQGVRASYLGNPMMD 191 (396)
T ss_pred -ccchhhhccCCCcc-----CHH---H----HHHhh---------chhhCEEeCCCHHHHHHH-HHCCCeEEEeCcCHHh
Confidence 00000111121111 000 0 00110 124555655553333332 2333488899954444
Q ss_pred CCCCCCCCCCCCCCCchhhhhhcccCccEEEEEecccccCCHHHHHHHHHHHHhC----CCCEEEEEcCCCCCCcccCCc
Q 012212 248 NHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALGLESL----QKPFLWVIRQDFMNGSRAKFP 323 (468)
Q Consensus 248 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~a~~~~----~~~~l~~~~~~~~~~~~~~~~ 323 (468)
.-... ... . + .++.++|.+--||....-...+..+++++..+ +..+++.+.+.. ..
T Consensus 192 ~l~~~-------~~~---~-l--~~~~~~lllLpGSR~ae~~~~lp~~l~al~~L~~~~~~~~v~~~~~~~-------~~ 251 (396)
T TIGR03492 192 GLEPP-------ERK---P-L--LTGRFRIALLPGSRPPEAYRNLKLLLRALEALPDSQPFVFLAAIVPSL-------SL 251 (396)
T ss_pred cCccc-------ccc---c-c--CCCCCEEEEECCCCHHHHHccHHHHHHHHHHHhhCCCeEEEEEeCCCC-------CH
Confidence 32110 000 0 1 12345788888887433333444566665544 345666663331 11
Q ss_pred hhHHHHh-------------------CCCceEEccc-ChHHHhcCCCCCceeeccCchhHHHhhhcCCceeccccccchh
Q 012212 324 DGFIERV-------------------SNRGKIVEWA-PQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQY 383 (468)
Q Consensus 324 ~~~~~~~-------------------~~nv~~~~~~-p~~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~~~DQ~ 383 (468)
+.+.+.. .+++.+..+. ...++++.+++ +|+-+|..| .|+...|+|+|++|.-..|.
T Consensus 252 ~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~ADl--vI~rSGt~T-~E~a~lg~P~Ilip~~~~q~ 328 (396)
T TIGR03492 252 EKLQAILEDLGWQLEGSSEDQTSLFQKGTLEVLLGRGAFAEILHWADL--GIAMAGTAT-EQAVGLGKPVIQLPGKGPQF 328 (396)
T ss_pred HHHHHHHHhcCceecCCccccchhhccCceEEEechHhHHHHHHhCCE--EEECcCHHH-HHHHHhCCCEEEEeCCCCHH
Confidence 1121111 1234555554 34678866666 999999776 99999999999999766676
Q ss_pred hhHHHHHHH--h-hceeEeeccCCCccCHHHHHHHHHHHhcChHHHHHHH
Q 012212 384 QNRNYICEA--W-KIGLQFFADENGIITRQEIQRKVLTLLKNDDIRSNSL 430 (468)
Q Consensus 384 ~na~rv~~~--l-G~g~~l~~~~~~~~t~~~l~~ai~~~l~~~~~r~~a~ 430 (468)
||...++. + |.++.+.. .+.+.|.+++.++|+|++.+++..
T Consensus 329 -na~~~~~~~~l~g~~~~l~~-----~~~~~l~~~l~~ll~d~~~~~~~~ 372 (396)
T TIGR03492 329 -TYGFAEAQSRLLGGSVFLAS-----KNPEQAAQVVRQLLADPELLERCR 372 (396)
T ss_pred -HHHHHHhhHhhcCCEEecCC-----CCHHHHHHHHHHHHcCHHHHHHHH
Confidence 98766651 1 66666654 456999999999999987665544
|
This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown. |
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.5e-10 Score=111.80 Aligned_cols=110 Identities=11% Similarity=0.120 Sum_probs=78.0
Q ss_pred hCCCceEEcccChHH---HhcCCCCCceeeccC----chhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeecc
Q 012212 330 VSNRGKIVEWAPQEK---VLGHSSVACFISHCG----WNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFAD 402 (468)
Q Consensus 330 ~~~nv~~~~~~p~~~---ll~~~~~~~~I~hGG----~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~ 402 (468)
..+|+.+.+|+|+.+ ++..+++ +|+.+. .+++.||+++|+|+|+.+.. .+...+++. +.|...+.
T Consensus 245 ~~~~v~~~g~~~~~~~~~~~~~~d~--~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~----~~~~~i~~~-~~g~~~~~- 316 (364)
T cd03814 245 RYPNVHFLGFLDGEELAAAYASADV--FVFPSRTETFGLVVLEAMASGLPVVAPDAG----GPADIVTDG-ENGLLVEP- 316 (364)
T ss_pred cCCcEEEEeccCHHHHHHHHHhCCE--EEECcccccCCcHHHHHHHcCCCEEEcCCC----CchhhhcCC-cceEEcCC-
Confidence 367889999999765 6766655 886654 47899999999999988644 456667764 88988865
Q ss_pred CCCccCHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHH
Q 012212 403 ENGIITRQEIQRKVLTLLKNDDIRSNSLKLKEVARKSLLGGGSSFRNFESFIS 455 (468)
Q Consensus 403 ~~~~~t~~~l~~ai~~~l~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 455 (468)
-+.+++.++|.+++.|++.+++..+-+.+..+ .-+.....+++++
T Consensus 317 ----~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 361 (364)
T cd03814 317 ----GDAEAFAAALAALLADPELRRRMAARARAEAE----RRSWEAFLDNLLE 361 (364)
T ss_pred ----CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHh----hcCHHHHHHHHHH
Confidence 46888999999999999876655554444432 2233444444444
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.3e-13 Score=113.90 Aligned_cols=126 Identities=21% Similarity=0.237 Sum_probs=83.4
Q ss_pred EEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCCCCCCCcCCCCCHHHHHH
Q 012212 7 VLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDGLELQAADREDPLKLGE 86 (468)
Q Consensus 7 Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 86 (468)
|+|.+.++.||++|+++||++|++|||+|++++++.+.+.+++ .++.|..++.. .... ..........
T Consensus 1 Ili~~~Gt~Ghv~P~lala~~L~~rGh~V~~~~~~~~~~~v~~----------~Gl~~~~~~~~-~~~~-~~~~~~~~~~ 68 (139)
T PF03033_consen 1 ILIATGGTRGHVYPFLALARALRRRGHEVRLATPPDFRERVEA----------AGLEFVPIPGD-SRLP-RSLEPLANLR 68 (139)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHTT-EEEEEETGGGHHHHHH----------TT-EEEESSSC-GGGG-HHHHHHHHHH
T ss_pred CEEEEcCChhHHHHHHHHHHHHhccCCeEEEeecccceecccc----------cCceEEEecCC-cCcC-cccchhhhhh
Confidence 7899999999999999999999999999999999999999988 66999998866 0000 0000111111
Q ss_pred HHHHH--hhHHHHHHHHHHh-----hCCCCCCceEEEecCCcccHHHHHHHhCCceEEEcccchH
Q 012212 87 SVARA--MRGCLRDLIEKIN-----QSNDCEPIRCVIADVTVGSALEVAESMGIARAAVVPFGPG 144 (468)
Q Consensus 87 ~~~~~--~~~~~~~ll~~l~-----~~~~~~~pDlvi~D~~~~~~~~~A~~lgiP~v~~~~~~~~ 144 (468)
...+. ......+.++... .......+|+++.+.....+..+|+++|||++.....+.+
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~vaE~~~iP~~~~~~~p~~ 133 (139)
T PF03033_consen 69 RLARLIRGLEEAMRILARFRPDLVVAAGGYVADDVIIAAPLAFAAALVAEQLGIPGVANRLFPWF 133 (139)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHCCCCHCTTTTECCEECHHHHHTHHHHHHHHHTS-EEEEESSGGG
T ss_pred hHHHHhhhhhHHHHHhhccCcchhhhccCcccchHHHhhhhcCccceeEhhhCchHHHHhhCCcC
Confidence 11111 1111222222222 1112245788888988888999999999999998776653
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B .... |
| >COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.41 E-value=2e-11 Score=106.50 Aligned_cols=144 Identities=15% Similarity=0.116 Sum_probs=106.1
Q ss_pred EEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCcccCCchhHHHHh--CCCceEEcccC-hHHHhcCCCCC
Q 012212 276 VVYVAFGSVAVLSQQQFAELALGLESLQKPFLWVIRQDFMNGSRAKFPDGFIERV--SNRGKIVEWAP-QEKVLGHSSVA 352 (468)
Q Consensus 276 vv~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~nv~~~~~~p-~~~ll~~~~~~ 352 (468)
-|+|++|.. .+..+...++..+.+....+-++++.. .+-..++..+. .+|..+.-... +..++..+++
T Consensus 160 ~ilI~lGGs--Dpk~lt~kvl~~L~~~~~nl~iV~gs~------~p~l~~l~k~~~~~~~i~~~~~~~dma~LMke~d~- 230 (318)
T COG3980 160 DILITLGGS--DPKNLTLKVLAELEQKNVNLHIVVGSS------NPTLKNLRKRAEKYPNINLYIDTNDMAELMKEADL- 230 (318)
T ss_pred eEEEEccCC--ChhhhHHHHHHHhhccCeeEEEEecCC------CcchhHHHHHHhhCCCeeeEecchhHHHHHHhcch-
Confidence 599999875 134466788888887776666777633 23334444333 46677664444 5678866655
Q ss_pred ceeeccCchhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeeccCCCccCHHHHHHHHHHHhcChHHHHHHHHH
Q 012212 353 CFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGIITRQEIQRKVLTLLKNDDIRSNSLKL 432 (468)
Q Consensus 353 ~~I~hGG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~~~~r~~a~~l 432 (468)
.|+.||. |++|++.-|+|.+++|+..-|--.|...+. +|+-..++.. ++...+...+.++.+|...|.+.-.-
T Consensus 231 -aI~AaGs-tlyEa~~lgvP~l~l~~a~NQ~~~a~~f~~-lg~~~~l~~~----l~~~~~~~~~~~i~~d~~~rk~l~~~ 303 (318)
T COG3980 231 -AISAAGS-TLYEALLLGVPSLVLPLAENQIATAKEFEA-LGIIKQLGYH----LKDLAKDYEILQIQKDYARRKNLSFG 303 (318)
T ss_pred -heeccch-HHHHHHHhcCCceEEeeeccHHHHHHHHHh-cCchhhccCC----CchHHHHHHHHHhhhCHHHhhhhhhc
Confidence 9999887 699999999999999999999999999988 5887776643 67777778888999988877766544
Q ss_pred HHH
Q 012212 433 KEV 435 (468)
Q Consensus 433 ~~~ 435 (468)
++.
T Consensus 304 ~~~ 306 (318)
T COG3980 304 SKL 306 (318)
T ss_pred cce
Confidence 433
|
|
| >PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.3e-09 Score=109.16 Aligned_cols=137 Identities=15% Similarity=0.172 Sum_probs=86.7
Q ss_pred EEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCcccCCchhHHHHh-CCCceEEcccChHH---HhcCCCC
Q 012212 276 VVYVAFGSVAVLSQQQFAELALGLESLQKPFLWVIRQDFMNGSRAKFPDGFIERV-SNRGKIVEWAPQEK---VLGHSSV 351 (468)
Q Consensus 276 vv~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~nv~~~~~~p~~~---ll~~~~~ 351 (468)
.+++..|+.. ....+..++++++..+.-.++.++.+ ...+.+.+.. ..+|++.+++|+.+ ++..+++
T Consensus 264 ~~i~~vGrl~--~~K~~~~li~a~~~~~~~~l~ivG~G-------~~~~~l~~~~~~~~V~f~G~v~~~ev~~~~~~aDv 334 (465)
T PLN02871 264 PLIVYVGRLG--AEKNLDFLKRVMERLPGARLAFVGDG-------PYREELEKMFAGTPTVFTGMLQGDELSQAYASGDV 334 (465)
T ss_pred eEEEEeCCCc--hhhhHHHHHHHHHhCCCcEEEEEeCC-------hHHHHHHHHhccCCeEEeccCCHHHHHHHHHHCCE
Confidence 3455567763 33456677888877643233344433 1222332222 35788889998655 6655555
Q ss_pred CceeeccC----chhHHHhhhcCCceeccccccchhhhHHHHHH---HhhceeEeeccCCCccCHHHHHHHHHHHhcChH
Q 012212 352 ACFISHCG----WNSTMEGLSMGVPFLCWPYFSDQYQNRNYICE---AWKIGLQFFADENGIITRQEIQRKVLTLLKNDD 424 (468)
Q Consensus 352 ~~~I~hGG----~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~---~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~~~ 424 (468)
+|.-.. ..++.||+++|+|+|+.... .....++. . +.|..++.. +.+++.++|.++++|++
T Consensus 335 --~V~pS~~E~~g~~vlEAmA~G~PVI~s~~g----g~~eiv~~~~~~-~~G~lv~~~-----d~~~la~~i~~ll~~~~ 402 (465)
T PLN02871 335 --FVMPSESETLGFVVLEAMASGVPVVAARAG----GIPDIIPPDQEG-KTGFLYTPG-----DVDDCVEKLETLLADPE 402 (465)
T ss_pred --EEECCcccccCcHHHHHHHcCCCEEEcCCC----CcHhhhhcCCCC-CceEEeCCC-----CHHHHHHHHHHHHhCHH
Confidence 885432 35789999999999987532 34444554 4 778888763 58999999999999988
Q ss_pred HHHHHHHHH
Q 012212 425 IRSNSLKLK 433 (468)
Q Consensus 425 ~r~~a~~l~ 433 (468)
.+++..+-+
T Consensus 403 ~~~~~~~~a 411 (465)
T PLN02871 403 LRERMGAAA 411 (465)
T ss_pred HHHHHHHHH
Confidence 655444433
|
|
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.37 E-value=7e-10 Score=106.84 Aligned_cols=90 Identities=17% Similarity=0.149 Sum_probs=66.2
Q ss_pred CCCceEEcccChHH---HhcCCCCCceee----ccC-chhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeecc
Q 012212 331 SNRGKIVEWAPQEK---VLGHSSVACFIS----HCG-WNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFAD 402 (468)
Q Consensus 331 ~~nv~~~~~~p~~~---ll~~~~~~~~I~----hGG-~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~ 402 (468)
.+++++.+|+|+.+ ++..+++ +|+ ..| ..++.||+++|+|+|+.+ .......+... +.|..++.
T Consensus 242 ~~~v~~~g~~~~~~~~~~~~~ad~--~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~----~~~~~e~i~~~-~~g~~~~~- 313 (359)
T cd03823 242 DPRVEFLGAYPQEEIDDFYAEIDV--LVVPSIWPENFPLVIREALAAGVPVIASD----IGGMAELVRDG-VNGLLFPP- 313 (359)
T ss_pred CCeEEEeCCCCHHHHHHHHHhCCE--EEEcCcccCCCChHHHHHHHCCCCEEECC----CCCHHHHhcCC-CcEEEECC-
Confidence 57888899998655 5756655 773 233 458999999999999874 34566666663 57888866
Q ss_pred CCCccCHHHHHHHHHHHhcChHHHHHHHHH
Q 012212 403 ENGIITRQEIQRKVLTLLKNDDIRSNSLKL 432 (468)
Q Consensus 403 ~~~~~t~~~l~~ai~~~l~~~~~r~~a~~l 432 (468)
-+.+++.++|.++++|++.++...+-
T Consensus 314 ----~d~~~l~~~i~~l~~~~~~~~~~~~~ 339 (359)
T cd03823 314 ----GDAEDLAAALERLIDDPDLLERLRAG 339 (359)
T ss_pred ----CCHHHHHHHHHHHHhChHHHHHHHHh
Confidence 35899999999999988865554443
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). |
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.36 E-value=2.8e-09 Score=104.49 Aligned_cols=87 Identities=20% Similarity=0.215 Sum_probs=64.1
Q ss_pred CCCceEEcccChHH---HhcCCCCCceee---ccCc-hhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeeccC
Q 012212 331 SNRGKIVEWAPQEK---VLGHSSVACFIS---HCGW-NSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADE 403 (468)
Q Consensus 331 ~~nv~~~~~~p~~~---ll~~~~~~~~I~---hGG~-~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~~ 403 (468)
.++|++.+++|+.+ ++..+++ +|. +.|. .++.||+++|+|+|+. |.......+... ..|+.++.
T Consensus 280 ~~~V~f~G~v~~~~~~~~l~~adv--~v~~s~~e~~~~~llEAmA~G~PVIas----~~~g~~e~i~~~-~~G~lv~~-- 350 (396)
T cd03818 280 LSRVHFLGRVPYDQYLALLQVSDV--HVYLTYPFVLSWSLLEAMACGCLVVGS----DTAPVREVITDG-ENGLLVDF-- 350 (396)
T ss_pred cceEEEeCCCCHHHHHHHHHhCcE--EEEcCcccccchHHHHHHHCCCCEEEc----CCCCchhhcccC-CceEEcCC--
Confidence 36788889999865 5555655 663 2333 4899999999999987 445566666663 56877765
Q ss_pred CCccCHHHHHHHHHHHhcChHHHHHH
Q 012212 404 NGIITRQEIQRKVLTLLKNDDIRSNS 429 (468)
Q Consensus 404 ~~~~t~~~l~~ai~~~l~~~~~r~~a 429 (468)
-+.++++++|.++++|++.+++.
T Consensus 351 ---~d~~~la~~i~~ll~~~~~~~~l 373 (396)
T cd03818 351 ---FDPDALAAAVIELLDDPARRARL 373 (396)
T ss_pred ---CCHHHHHHHHHHHHhCHHHHHHH
Confidence 46999999999999998754443
|
ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). |
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.2e-09 Score=106.37 Aligned_cols=350 Identities=16% Similarity=0.044 Sum_probs=170.9
Q ss_pred EEEEEcCC----CccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCCCCCCCcCCCCCH
Q 012212 6 HVLVIPYP----AQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDGLELQAADREDP 81 (468)
Q Consensus 6 ~Il~~~~~----~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 81 (468)
||++++.. ..|+......++++|+++||+|++++............. .......++++..++....... ..+
T Consensus 1 kIl~i~~~~~~~~~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---~~~ 76 (394)
T cd03794 1 KILILSQYFPPELGGGAFRTTELAEELVKRGHEVTVITGSPNYPSGKIYKG-YKREEVDGVRVHRVPLPPYKKN---GLL 76 (394)
T ss_pred CEEEEecccCCccCCcceeHHHHHHHHHhCCceEEEEecCCCccccccccc-ceEEecCCeEEEEEecCCCCcc---chH
Confidence 46666443 258999999999999999999999998654433221000 0000114566665554322111 111
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCcc----cHHHHHHHhCCceEEEcccchHHHHHHhhhhhHhh
Q 012212 82 LKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVG----SALEVAESMGIARAAVVPFGPGSLALSLQFPKLLE 157 (468)
Q Consensus 82 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~----~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~ 157 (468)
...... ..........+.. .. .+||+|++..... .+..++...++|++..............
T Consensus 77 ~~~~~~-~~~~~~~~~~~~~--~~----~~~D~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~------- 142 (394)
T cd03794 77 KRLLNY-LSFALSALLALLK--RR----RRPDVIIATSPPLLIALAALLLARLKGAPFVLEVRDLWPESAVAL------- 142 (394)
T ss_pred HHHHhh-hHHHHHHHHHHHh--cc----cCCCEEEEcCChHHHHHHHHHHHHhcCCCEEEEehhhcchhHHHc-------
Confidence 111111 1111111111111 11 6799999996222 3344566679999876542110000000
Q ss_pred cCCCCCCCcccccCCcccccCCCccCcccccCcCCCCCChhHHHHHHHHHHHHHhhccccEEEEcCcccCChhh-hccC-
Q 012212 158 AGIIDPNGFAILNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPA-CDLI- 235 (468)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~-~~~~- 235 (468)
+. ............... ...+..++.++..+....+.-. ....
T Consensus 143 -~~--------------------------------~~~~~~~~~~~~~~~--~~~~~~~d~vi~~s~~~~~~~~~~~~~~ 187 (394)
T cd03794 143 -GL--------------------------------LKNGSLLYRLLRKLE--RLIYRRADAIVVISPGMREYLVRRGVPP 187 (394)
T ss_pred -cC--------------------------------ccccchHHHHHHHHH--HHHHhcCCEEEEECHHHHHHHHhcCCCc
Confidence 00 000000001111111 1124577888877765544321 1111
Q ss_pred CCceeeccccCCCCCCCCCCCCCCCCCchhhhhhcccCccEEEEEeccccc-CCHHHHHHHHHHHHhC-CCCEEEEEcCC
Q 012212 236 PNILPIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAV-LSQQQFAELALGLESL-QKPFLWVIRQD 313 (468)
Q Consensus 236 p~v~~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~-~~~~~~~~~~~a~~~~-~~~~l~~~~~~ 313 (468)
.++..+........... ........... ...++.+++..|+... ...+.+..++..+.+. +.++++ ++.+
T Consensus 188 ~~~~~i~~~~~~~~~~~-----~~~~~~~~~~~--~~~~~~~i~~~G~~~~~k~~~~l~~~~~~l~~~~~~~l~i-~G~~ 259 (394)
T cd03794 188 EKISVIPNGVDLELFKP-----PPADESLRKEL--GLDDKFVVLYAGNIGRAQGLDTLLEAAALLKDRPDIRFLI-VGDG 259 (394)
T ss_pred CceEEcCCCCCHHHcCC-----ccchhhhhhcc--CCCCcEEEEEecCcccccCHHHHHHHHHHHhhcCCeEEEE-eCCc
Confidence 24444443222111100 00000000111 1223466666777632 2233334444444333 333333 3322
Q ss_pred CCCCcccCCchhHHH----HhCCCceEEcccChHH---HhcCCCCCceeeccC---------chhHHHhhhcCCceeccc
Q 012212 314 FMNGSRAKFPDGFIE----RVSNRGKIVEWAPQEK---VLGHSSVACFISHCG---------WNSTMEGLSMGVPFLCWP 377 (468)
Q Consensus 314 ~~~~~~~~~~~~~~~----~~~~nv~~~~~~p~~~---ll~~~~~~~~I~hGG---------~~s~~eal~~GvP~v~~P 377 (468)
.....+.+ ...+|+++.+++|+.+ ++..+++ +|.... .+++.||+++|+|+|+.+
T Consensus 260 -------~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di--~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~ 330 (394)
T cd03794 260 -------PEKEELKELAKALGLDNVTFLGRVPKEELPELLAAADV--GLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASV 330 (394)
T ss_pred -------ccHHHHHHHHHHcCCCcEEEeCCCChHHHHHHHHhhCe--eEEeccCcccccccCchHHHHHHHCCCcEEEec
Confidence 11122221 2257889999998755 5655655 764322 344799999999999986
Q ss_pred cccchhhhHHHHHHHhhceeEeeccCCCccCHHHHHHHHHHHhcChHHHHHHHHHHHH
Q 012212 378 YFSDQYQNRNYICEAWKIGLQFFADENGIITRQEIQRKVLTLLKNDDIRSNSLKLKEV 435 (468)
Q Consensus 378 ~~~DQ~~na~rv~~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~~~~r~~a~~l~~~ 435 (468)
..+. ...+.+. +.|..++. -+.+++.++|.++++|++.+++..+-+.+
T Consensus 331 ~~~~----~~~~~~~-~~g~~~~~-----~~~~~l~~~i~~~~~~~~~~~~~~~~~~~ 378 (394)
T cd03794 331 DGES----AELVEEA-GAGLVVPP-----GDPEALAAAILELLDDPEERAEMGENGRR 378 (394)
T ss_pred CCCc----hhhhccC-CcceEeCC-----CCHHHHHHHHHHHHhChHHHHHHHHHHHH
Confidence 6543 3344442 67777765 36899999999999988866555444433
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. |
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.30 E-value=2.2e-09 Score=105.27 Aligned_cols=88 Identities=15% Similarity=0.200 Sum_probs=65.6
Q ss_pred CCCceEEcccChHH---HhcCCCCCceeec----cCchhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeeccC
Q 012212 331 SNRGKIVEWAPQEK---VLGHSSVACFISH----CGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADE 403 (468)
Q Consensus 331 ~~nv~~~~~~p~~~---ll~~~~~~~~I~h----GG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~~ 403 (468)
.+|+.+.+|+|+.+ ++..+++ +++. |-..++.||+++|+|+|+... ......+++. +.|..++.
T Consensus 282 ~~~v~~~g~~~~~~~~~~~~~adi--~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~----~~~~e~i~~~-~~g~~~~~-- 352 (398)
T cd03800 282 IDRVDFPGRVSREDLPALYRAADV--FVNPALYEPFGLTALEAMACGLPVVATAV----GGPRDIVVDG-VTGLLVDP-- 352 (398)
T ss_pred CceEEEeccCCHHHHHHHHHhCCE--EEecccccccCcHHHHHHhcCCCEEECCC----CCHHHHccCC-CCeEEeCC--
Confidence 46788889999866 4656555 7754 223689999999999998753 3456667774 78888865
Q ss_pred CCccCHHHHHHHHHHHhcChHHHHHHH
Q 012212 404 NGIITRQEIQRKVLTLLKNDDIRSNSL 430 (468)
Q Consensus 404 ~~~~t~~~l~~ai~~~l~~~~~r~~a~ 430 (468)
-+.++++++|.++++|++.+++..
T Consensus 353 ---~~~~~l~~~i~~l~~~~~~~~~~~ 376 (398)
T cd03800 353 ---RDPEALAAALRRLLTDPALRRRLS 376 (398)
T ss_pred ---CCHHHHHHHHHHHHhCHHHHHHHH
Confidence 469999999999999887554443
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. |
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Probab=99.30 E-value=5.9e-09 Score=100.33 Aligned_cols=319 Identities=16% Similarity=0.071 Sum_probs=166.5
Q ss_pred ccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCCCCCCCcCCCCCHHHHHHHHHHHhhH
Q 012212 15 QGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDGLELQAADREDPLKLGESVARAMRG 94 (468)
Q Consensus 15 ~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (468)
.|+...+..+++.|.+.||+|++++............ ........ .. .... ...........
T Consensus 14 ~G~~~~~~~l~~~L~~~g~~v~i~~~~~~~~~~~~~~--------~~~~~~~~-----~~---~~~~--~~~~~~~~~~~ 75 (374)
T cd03801 14 GGAERHVLELARALAARGHEVTVLTPGDGGLPDEEEV--------GGIVVVRP-----PP---LLRV--RRLLLLLLLAL 75 (374)
T ss_pred CcHhHHHHHHHHHHHhcCceEEEEecCCCCCCceeee--------cCcceecC-----Cc---cccc--chhHHHHHHHH
Confidence 6899999999999999999999999976443222100 00000000 00 0000 00111111111
Q ss_pred HHHHHHHHHhhCCCCCCceEEEecCCcccHH--HHHHHhCCceEEEcccchHHHHHHhhhhhHhhcCCCCCCCcccccCC
Q 012212 95 CLRDLIEKINQSNDCEPIRCVIADVTVGSAL--EVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGIIDPNGFAILNDG 172 (468)
Q Consensus 95 ~~~~ll~~l~~~~~~~~pDlvi~D~~~~~~~--~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 172 (468)
.+..+++. .+||+|++........ ..+...++|++...........
T Consensus 76 ~~~~~~~~-------~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~------------------------- 123 (374)
T cd03801 76 RLRRLLRR-------ERFDVVHAHDWLALLAAALAARLLGIPLVLTVHGLEFGRP------------------------- 123 (374)
T ss_pred HHHHHhhh-------cCCcEEEEechhHHHHHHHHHHhcCCcEEEEeccchhhcc-------------------------
Confidence 23333333 5699999997766444 4778889999876542221100
Q ss_pred cccccCCCccCcccccCcCCCCCChhHHHHHHHHHHHHHhhccccEEEEcCcccCChhhhccC---CCceeeccccCCCC
Q 012212 173 LISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACDLI---PNILPIGPLLASNH 249 (468)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~~~~~---p~v~~vGpl~~~~~ 249 (468)
. .. ........ ..........++.+++.+....+.-..... .++..+........
T Consensus 124 ----------------~-~~---~~~~~~~~--~~~~~~~~~~~d~~i~~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 181 (374)
T cd03801 124 ----------------G-NE---LGLLLKLA--RALERRALRRADRIIAVSEATREELRELGGVPPEKITVIPNGVDTER 181 (374)
T ss_pred ----------------c-cc---hhHHHHHH--HHHHHHHHHhCCEEEEecHHHHHHHHhcCCCCCCcEEEecCcccccc
Confidence 0 00 00000000 111122345778888888765554322222 24555543332211
Q ss_pred CCCCCCCCCCCCCchhhhhhcccCccEEEEEecccccCCHHHHHHHHHHHHhCC---CCEEEEEcCCCCCCcccCCchhH
Q 012212 250 SGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALGLESLQ---KPFLWVIRQDFMNGSRAKFPDGF 326 (468)
Q Consensus 250 ~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~a~~~~~---~~~l~~~~~~~~~~~~~~~~~~~ 326 (468)
.. ........-.. ...++.+++.+|+.. ...-+..+++++..+. .++-+.+.+. ......+
T Consensus 182 ~~-------~~~~~~~~~~~-~~~~~~~i~~~g~~~--~~k~~~~~i~~~~~~~~~~~~~~l~i~G~------~~~~~~~ 245 (374)
T cd03801 182 FR-------PAPRAARRRLG-IPEDEPVILFVGRLV--PRKGVDLLLEALAKLRKEYPDVRLVIVGD------GPLREEL 245 (374)
T ss_pred cC-------ccchHHHhhcC-CcCCCeEEEEecchh--hhcCHHHHHHHHHHHhhhcCCeEEEEEeC------cHHHHHH
Confidence 11 00000000011 112235666667753 2223344445443322 2333333222 0111122
Q ss_pred HH-----HhCCCceEEcccChHH---HhcCCCCCceee----ccCchhHHHhhhcCCceeccccccchhhhHHHHHHHhh
Q 012212 327 IE-----RVSNRGKIVEWAPQEK---VLGHSSVACFIS----HCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWK 394 (468)
Q Consensus 327 ~~-----~~~~nv~~~~~~p~~~---ll~~~~~~~~I~----hGG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG 394 (468)
.+ ...+++.+.+++++.+ ++..+++ +|. -|..+++.||+++|+|+|+.+. ...+..+++. +
T Consensus 246 ~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di--~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~----~~~~~~~~~~-~ 318 (374)
T cd03801 246 EALAAELGLGDRVTFLGFVPDEDLPALYAAADV--FVLPSLYEGFGLVLLEAMAAGLPVVASDV----GGIPEVVEDG-E 318 (374)
T ss_pred HHHHHHhCCCcceEEEeccChhhHHHHHHhcCE--EEecchhccccchHHHHHHcCCcEEEeCC----CChhHHhcCC-c
Confidence 11 1367889999997644 6756555 773 3556799999999999998754 5566677754 7
Q ss_pred ceeEeeccCCCccCHHHHHHHHHHHhcChHHHHHHHHHH
Q 012212 395 IGLQFFADENGIITRQEIQRKVLTLLKNDDIRSNSLKLK 433 (468)
Q Consensus 395 ~g~~l~~~~~~~~t~~~l~~ai~~~l~~~~~r~~a~~l~ 433 (468)
.|...+. .+.+++.++|.++++|++.+++..+-+
T Consensus 319 ~g~~~~~-----~~~~~l~~~i~~~~~~~~~~~~~~~~~ 352 (374)
T cd03801 319 TGLLVPP-----GDPEALAEAILRLLDDPELRRRLGEAA 352 (374)
T ss_pred ceEEeCC-----CCHHHHHHHHHHHHcChHHHHHHHHHH
Confidence 8887765 458999999999999988655444433
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. |
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.29 E-value=9e-09 Score=100.00 Aligned_cols=88 Identities=14% Similarity=0.181 Sum_probs=64.0
Q ss_pred CCCceEEcccCh-HHHhcCCCCCceee----ccCchhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeeccCCC
Q 012212 331 SNRGKIVEWAPQ-EKVLGHSSVACFIS----HCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENG 405 (468)
Q Consensus 331 ~~nv~~~~~~p~-~~ll~~~~~~~~I~----hGG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~~~~ 405 (468)
.+++++.++.++ ..++..+++ +|. -|...++.||+++|+|+|+. |....+..+++. ..|...+.
T Consensus 252 ~~~v~~~g~~~~~~~~~~~~d~--~v~ps~~E~~~~~~~EAma~g~PvI~s----~~~~~~e~i~~~-~~G~~~~~---- 320 (371)
T cd04962 252 QDDVLFLGKQDHVEELLSIADL--FLLPSEKESFGLAALEAMACGVPVVAS----NAGGIPEVVKHG-ETGFLVDV---- 320 (371)
T ss_pred CceEEEecCcccHHHHHHhcCE--EEeCCCcCCCccHHHHHHHcCCCEEEe----CCCCchhhhcCC-CceEEcCC----
Confidence 467888888765 567766655 762 34456999999999999986 444566666663 57877765
Q ss_pred ccCHHHHHHHHHHHhcChHHHHHHH
Q 012212 406 IITRQEIQRKVLTLLKNDDIRSNSL 430 (468)
Q Consensus 406 ~~t~~~l~~ai~~~l~~~~~r~~a~ 430 (468)
-+.+++.++|.++++|++.+++..
T Consensus 321 -~~~~~l~~~i~~l~~~~~~~~~~~ 344 (371)
T cd04962 321 -GDVEAMAEYALSLLEDDELWQEFS 344 (371)
T ss_pred -CCHHHHHHHHHHHHhCHHHHHHHH
Confidence 368999999999999887544433
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.28 E-value=6.6e-09 Score=99.74 Aligned_cols=326 Identities=14% Similarity=0.082 Sum_probs=166.1
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHH-HHHhhhhhccCCCCCeEEEEcCCCCCCCcCCCCCHHHH
Q 012212 6 HVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKK-IIASLQEKAEDSSSQIKLVTIPDGLELQAADREDPLKL 84 (468)
Q Consensus 6 ~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~-i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 84 (468)
||++++....|+......++++|.++||+|++++....... ... .++++..++..... ......
T Consensus 1 kIl~i~~~~~g~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~-----~~~~~~ 65 (359)
T cd03808 1 KILHIVTVDGGLYSFRLPLIKALRAAGYEVHVVAPPGDELEELEA----------LGVKVIPIPLDRRG-----INPFKD 65 (359)
T ss_pred CeeEEEecchhHHHHHHHHHHHHHhcCCeeEEEecCCCccccccc----------CCceEEeccccccc-----cChHhH
Confidence 57888777789999999999999999999999998765543 111 55666666543211 111111
Q ss_pred HHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCcc--cHHHHHHHhCCceEEEcccchHHHHHHhhhhhHhhcCCCC
Q 012212 85 GESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVG--SALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGIID 162 (468)
Q Consensus 85 ~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~ 162 (468)
+.. +..+.+.++. .+||+|++..... .+..+++..+.|.+...........
T Consensus 66 ~~~--------~~~~~~~~~~----~~~dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--------------- 118 (359)
T cd03808 66 LKA--------LLRLYRLLRK----ERPDIVHTHTPKPGILGRLAARLAGVPKVIYTVHGLGFVF--------------- 118 (359)
T ss_pred HHH--------HHHHHHHHHh----cCCCEEEEccccchhHHHHHHHHcCCCCEEEEecCcchhh---------------
Confidence 111 1222233333 5699999886544 2334444355555443321110000
Q ss_pred CCCcccccCCcccccCCCccCcccccCcCCCCCChhHHHHHHHHHHHHHhhccccEEEEcCcccCChhhhccC---CCce
Q 012212 163 PNGFAILNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACDLI---PNIL 239 (468)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~~~~~---p~v~ 239 (468)
.... ..........+ .....++.++..+....+.-..... ....
T Consensus 119 ------------------------------~~~~-~~~~~~~~~~~--~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~~ 165 (359)
T cd03808 119 ------------------------------TSGG-LKRRLYLLLER--LALRFTDKVIFQNEDDRDLALKLGIIKKKKTV 165 (359)
T ss_pred ------------------------------ccch-hHHHHHHHHHH--HHHhhccEEEEcCHHHHHHHHHhcCCCcCceE
Confidence 0000 00111111111 1133557777777654443211111 1222
Q ss_pred eeccccCCCCCCCCCCCCCCCCCchhhhhhcccCccEEEEEeccccc-CCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCc
Q 012212 240 PIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAV-LSQQQFAELALGLESLQKPFLWVIRQDFMNGS 318 (468)
Q Consensus 240 ~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~-~~~~~~~~~~~a~~~~~~~~l~~~~~~~~~~~ 318 (468)
.+.|...+.... ...... ..+++.+++..|+... ...+.+..++..+.+.+..+.+.+-+.....
T Consensus 166 ~~~~~~~~~~~~------~~~~~~-------~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~~~l~i~G~~~~~- 231 (359)
T cd03808 166 LIPGSGVDLDRF------SPSPEP-------IPEDDPVFLFVARLLKDKGIDELLEAARILKAKGPNVRLLLVGDGDEE- 231 (359)
T ss_pred EecCCCCChhhc------Cccccc-------cCCCCcEEEEEeccccccCHHHHHHHHHHHHhcCCCeEEEEEcCCCcc-
Confidence 222221111100 000000 1223467777787632 2233333444444432333333322221110
Q ss_pred ccCCchhHHHH--hCCCceEEcccCh-HHHhcCCCCCceeeccC----chhHHHhhhcCCceeccccccchhhhHHHHHH
Q 012212 319 RAKFPDGFIER--VSNRGKIVEWAPQ-EKVLGHSSVACFISHCG----WNSTMEGLSMGVPFLCWPYFSDQYQNRNYICE 391 (468)
Q Consensus 319 ~~~~~~~~~~~--~~~nv~~~~~~p~-~~ll~~~~~~~~I~hGG----~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~ 391 (468)
.......... ..+++++.++..+ ..++..+++ +|.-.. .+++.||+++|+|+|+... ......+++
T Consensus 232 -~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~adi--~i~ps~~e~~~~~~~Ea~~~G~Pvi~s~~----~~~~~~i~~ 304 (359)
T cd03808 232 -NPAAILEIEKLGLEGRVEFLGFRDDVPELLAAADV--FVLPSYREGLPRVLLEAMAMGRPVIATDV----PGCREAVID 304 (359)
T ss_pred -hhhHHHHHHhcCCcceEEEeeccccHHHHHHhccE--EEecCcccCcchHHHHHHHcCCCEEEecC----CCchhhhhc
Confidence 0000000111 2467787777544 567866665 775433 5789999999999998744 344556665
Q ss_pred HhhceeEeeccCCCccCHHHHHHHHHHHhcChHHHHHHHHHH
Q 012212 392 AWKIGLQFFADENGIITRQEIQRKVLTLLKNDDIRSNSLKLK 433 (468)
Q Consensus 392 ~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~~~~r~~a~~l~ 433 (468)
. +.|..++. -+.+++.++|.+++.|++.+++..+-+
T Consensus 305 ~-~~g~~~~~-----~~~~~~~~~i~~l~~~~~~~~~~~~~~ 340 (359)
T cd03808 305 G-VNGFLVPP-----GDAEALADAIERLIEDPELRARMGQAA 340 (359)
T ss_pred C-cceEEECC-----CCHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 4 77887765 368999999999999987655444333
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. |
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.9e-08 Score=99.04 Aligned_cols=83 Identities=18% Similarity=0.245 Sum_probs=58.8
Q ss_pred CCceEE-cccChHH---HhcCCCCCceee-c------cCchhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEee
Q 012212 332 NRGKIV-EWAPQEK---VLGHSSVACFIS-H------CGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFF 400 (468)
Q Consensus 332 ~nv~~~-~~~p~~~---ll~~~~~~~~I~-h------GG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~ 400 (468)
+|+.+. +|+|..+ ++..+++ +|. + |-..++.||+++|+|+|+.. .......+++. +.|+.++
T Consensus 294 ~~~~~~~g~~~~~~~~~~l~~aDv--~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~----~~~~~eiv~~~-~~G~lv~ 366 (415)
T cd03816 294 KKVTIRTPWLSAEDYPKLLASADL--GVSLHTSSSGLDLPMKVVDMFGCGLPVCALD----FKCIDELVKHG-ENGLVFG 366 (415)
T ss_pred CcEEEEcCcCCHHHHHHHHHhCCE--EEEccccccccCCcHHHHHHHHcCCCEEEeC----CCCHHHHhcCC-CCEEEEC
Confidence 456655 7888655 5655655 763 1 12457999999999999873 34566677774 6788772
Q ss_pred ccCCCccCHHHHHHHHHHHhcC---hHHHHH
Q 012212 401 ADENGIITRQEIQRKVLTLLKN---DDIRSN 428 (468)
Q Consensus 401 ~~~~~~~t~~~l~~ai~~~l~~---~~~r~~ 428 (468)
+.++++++|.++++| ++.+++
T Consensus 367 -------d~~~la~~i~~ll~~~~~~~~~~~ 390 (415)
T cd03816 367 -------DSEELAEQLIDLLSNFPNRGKLNS 390 (415)
T ss_pred -------CHHHHHHHHHHHHhcCCCHHHHHH
Confidence 589999999999998 554433
|
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. |
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.26 E-value=6e-09 Score=100.79 Aligned_cols=83 Identities=16% Similarity=0.339 Sum_probs=63.0
Q ss_pred CCCceEEcccChHH---HhcCCCCCceeec----cCchhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeeccC
Q 012212 331 SNRGKIVEWAPQEK---VLGHSSVACFISH----CGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADE 403 (468)
Q Consensus 331 ~~nv~~~~~~p~~~---ll~~~~~~~~I~h----GG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~~ 403 (468)
.+|+.+.+++|+.+ ++..+++ +|.. |...++.||+++|+|+|+.. ....+..+++. +.|..++..+
T Consensus 258 ~~~v~~~g~~~~~~~~~~~~~ad~--~l~~s~~e~~~~~~~Ea~~~g~PvI~~~----~~~~~~~i~~~-~~g~~~~~~~ 330 (374)
T cd03817 258 ADRVIFTGFVPREELPDYYKAADL--FVFASTTETQGLVLLEAMAAGLPVVAVD----APGLPDLVADG-ENGFLFPPGD 330 (374)
T ss_pred CCcEEEeccCChHHHHHHHHHcCE--EEecccccCcChHHHHHHHcCCcEEEeC----CCChhhheecC-ceeEEeCCCC
Confidence 57888899999865 5666655 7743 33478999999999999874 44566666764 7888887643
Q ss_pred CCccCHHHHHHHHHHHhcChHHH
Q 012212 404 NGIITRQEIQRKVLTLLKNDDIR 426 (468)
Q Consensus 404 ~~~~t~~~l~~ai~~~l~~~~~r 426 (468)
. ++.+++.++++|++.+
T Consensus 331 -----~-~~~~~i~~l~~~~~~~ 347 (374)
T cd03817 331 -----E-ALAEALLRLLQDPELR 347 (374)
T ss_pred -----H-HHHHHHHHHHhChHHH
Confidence 2 8999999999998744
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. |
| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=8.7e-08 Score=94.53 Aligned_cols=118 Identities=12% Similarity=0.101 Sum_probs=74.5
Q ss_pred CCceEEcccChHH---HhcCCCCCceeeccCc------hhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeecc
Q 012212 332 NRGKIVEWAPQEK---VLGHSSVACFISHCGW------NSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFAD 402 (468)
Q Consensus 332 ~nv~~~~~~p~~~---ll~~~~~~~~I~hGG~------~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~ 402 (468)
+|+++.+|+|+.+ ++..+++-++.+..+. +.+.|++++|+|+|+....+. .....++ +.|+.++.
T Consensus 284 ~~v~f~G~~~~~~~~~~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~--~~~~~i~---~~G~~~~~- 357 (412)
T PRK10307 284 PNVHFLPLQPYDRLPALLKMADCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGT--ELGQLVE---GIGVCVEP- 357 (412)
T ss_pred CceEEeCCCCHHHHHHHHHhcCEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCc--hHHHHHh---CCcEEeCC-
Confidence 4788889998754 6766776444444332 346899999999999864321 1122232 57777765
Q ss_pred CCCccCHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhhcc
Q 012212 403 ENGIITRQEIQRKVLTLLKNDDIRSNSLKLKEVARKSLLGGGSSFRNFESFISDIKMLIS 462 (468)
Q Consensus 403 ~~~~~t~~~l~~ai~~~l~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 462 (468)
-+.++++++|.++++|++.+++..+-+... +.+.=+....++++++.+++..+
T Consensus 358 ----~d~~~la~~i~~l~~~~~~~~~~~~~a~~~---~~~~fs~~~~~~~~~~~~~~~~~ 410 (412)
T PRK10307 358 ----ESVEALVAAIAALARQALLRPKLGTVAREY---AERTLDKENVLRQFIADIRGLVA 410 (412)
T ss_pred ----CCHHHHHHHHHHHHhCHHHHHHHHHHHHHH---HHHHcCHHHHHHHHHHHHHHHhc
Confidence 368999999999999887554433333222 11122445667777777766553
|
|
| >PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.23 E-value=1.2e-08 Score=101.00 Aligned_cols=84 Identities=15% Similarity=0.164 Sum_probs=60.8
Q ss_pred HHHhcCCCCCceee-----ccCchhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeeccCCCccCHHHHHHHHH
Q 012212 343 EKVLGHSSVACFIS-----HCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGIITRQEIQRKVL 417 (468)
Q Consensus 343 ~~ll~~~~~~~~I~-----hGG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~~~~~~t~~~l~~ai~ 417 (468)
..+++.+++ ++. -||..++.||+++|+|+|+.|...++.+....+.+. |.++.. -+.+++.++|.
T Consensus 314 ~~~y~~aDi--~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~~-g~~~~~-------~d~~~La~~l~ 383 (425)
T PRK05749 314 GLLYAIADI--AFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERLLQA-GAAIQV-------EDAEDLAKAVT 383 (425)
T ss_pred HHHHHhCCE--EEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHHHHC-CCeEEE-------CCHHHHHHHHH
Confidence 446655554 433 134446999999999999999988888888777664 666543 35899999999
Q ss_pred HHhcChHHHHHHHHHHHHH
Q 012212 418 TLLKNDDIRSNSLKLKEVA 436 (468)
Q Consensus 418 ~~l~~~~~r~~a~~l~~~~ 436 (468)
++++|++.+++..+-+...
T Consensus 384 ~ll~~~~~~~~m~~~a~~~ 402 (425)
T PRK05749 384 YLLTDPDARQAYGEAGVAF 402 (425)
T ss_pred HHhcCHHHHHHHHHHHHHH
Confidence 9999988766554444443
|
|
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.20 E-value=3.2e-08 Score=95.76 Aligned_cols=113 Identities=13% Similarity=0.074 Sum_probs=72.2
Q ss_pred CCCceEEcccC-hH---HHhcCCCCCceeec----cCchhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeecc
Q 012212 331 SNRGKIVEWAP-QE---KVLGHSSVACFISH----CGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFAD 402 (468)
Q Consensus 331 ~~nv~~~~~~p-~~---~ll~~~~~~~~I~h----GG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~ 402 (468)
..++.+.+|++ +. .++..+++ +|.- |..+++.||+++|+|+|+... ......+... +.|..++.
T Consensus 243 ~~~v~~~g~~~~~~~~~~~~~~ad~--~l~ps~~e~~g~~~~Eam~~g~PvI~~~~----~~~~e~~~~~-~~g~~~~~- 314 (365)
T cd03825 243 PFPVHYLGSLNDDESLALIYSAADV--FVVPSLQENFPNTAIEALACGTPVVAFDV----GGIPDIVDHG-VTGYLAKP- 314 (365)
T ss_pred CCceEecCCcCCHHHHHHHHHhCCE--EEeccccccccHHHHHHHhcCCCEEEecC----CCChhheeCC-CceEEeCC-
Confidence 56778889998 43 35755555 8774 335899999999999998643 3444455552 57777665
Q ss_pred CCCccCHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHH
Q 012212 403 ENGIITRQEIQRKVLTLLKNDDIRSNSLKLKEVARKSLLGGGSSFRNFESFISDIK 458 (468)
Q Consensus 403 ~~~~~t~~~l~~ai~~~l~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 458 (468)
.+.+++.+++.++++|++.+++..+-+..... +.=+.....+++++.++
T Consensus 315 ----~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~---~~~s~~~~~~~~~~~y~ 363 (365)
T cd03825 315 ----GDPEDLAEGIEWLLADPDEREELGEAARELAE---NEFDSRVQAKRYLSLYE 363 (365)
T ss_pred ----CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH---HhcCHHHHHHHHHHHHh
Confidence 46899999999999988744333322222211 12244455555555443
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. |
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.18 E-value=8e-08 Score=94.61 Aligned_cols=113 Identities=15% Similarity=0.093 Sum_probs=74.5
Q ss_pred CCCceEEcccChHH---HhcCCCCCceee---ccC-chhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeeccC
Q 012212 331 SNRGKIVEWAPQEK---VLGHSSVACFIS---HCG-WNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADE 403 (468)
Q Consensus 331 ~~nv~~~~~~p~~~---ll~~~~~~~~I~---hGG-~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~~ 403 (468)
.++|++.+++|+.+ ++..+++ +|. +.| ..++.||+++|+|+|+... ......+++. +.|..++.
T Consensus 282 ~~~v~~~g~~~~~~~~~~l~~ad~--~v~ps~~E~~g~~~lEAma~G~Pvi~~~~----~~~~e~i~~~-~~g~~~~~-- 352 (405)
T TIGR03449 282 ADRVRFLPPRPPEELVHVYRAADV--VAVPSYNESFGLVAMEAQACGTPVVAARV----GGLPVAVADG-ETGLLVDG-- 352 (405)
T ss_pred CceEEECCCCCHHHHHHHHHhCCE--EEECCCCCCcChHHHHHHHcCCCEEEecC----CCcHhhhccC-CceEECCC--
Confidence 46789999998754 6766665 763 233 4689999999999998743 3455556663 67887765
Q ss_pred CCccCHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHh
Q 012212 404 NGIITRQEIQRKVLTLLKNDDIRSNSLKLKEVARKSLLGGGSSFRNFESFISDIKM 459 (468)
Q Consensus 404 ~~~~t~~~l~~ai~~~l~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 459 (468)
-+.++++++|.++++|++.+++...-+.+..+ .=+-...++++++.+.+
T Consensus 353 ---~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~----~fsw~~~~~~~~~~y~~ 401 (405)
T TIGR03449 353 ---HDPADWADALARLLDDPRTRIRMGAAAVEHAA----GFSWAATADGLLSSYRD 401 (405)
T ss_pred ---CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH----hCCHHHHHHHHHHHHHH
Confidence 36899999999999988765554444333222 11334444555544443
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. |
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.17 E-value=3.4e-08 Score=95.22 Aligned_cols=134 Identities=15% Similarity=0.223 Sum_probs=84.9
Q ss_pred EEEEEecccccCCHHHHHHHHHHHHhCC-CCEEEEEcCCCCCCcccCCchhHHH-----HhCCCceEEcccChHH---Hh
Q 012212 276 VVYVAFGSVAVLSQQQFAELALGLESLQ-KPFLWVIRQDFMNGSRAKFPDGFIE-----RVSNRGKIVEWAPQEK---VL 346 (468)
Q Consensus 276 vv~vs~Gs~~~~~~~~~~~~~~a~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~-----~~~~nv~~~~~~p~~~---ll 346 (468)
.+++..|+.. ...-+..+++++.++. .++++...+. ....+.+ ...+||.+.+|+|+.+ ++
T Consensus 192 ~~i~~~G~~~--~~K~~~~li~a~~~l~~~~l~i~G~g~--------~~~~~~~~~~~~~~~~~V~~~g~v~~~~~~~~~ 261 (357)
T cd03795 192 PFFLFVGRLV--YYKGLDVLLEAAAALPDAPLVIVGEGP--------LEAELEALAAALGLLDRVRFLGRLDDEEKAALL 261 (357)
T ss_pred cEEEEecccc--cccCHHHHHHHHHhccCcEEEEEeCCh--------hHHHHHHHHHhcCCcceEEEcCCCCHHHHHHHH
Confidence 4666677763 2234556777777666 3444433222 1122221 1257899999999754 66
Q ss_pred cCCCCCcee--e---ccCc-hhHHHhhhcCCceeccccccchhhhHHHHHH-HhhceeEeeccCCCccCHHHHHHHHHHH
Q 012212 347 GHSSVACFI--S---HCGW-NSTMEGLSMGVPFLCWPYFSDQYQNRNYICE-AWKIGLQFFADENGIITRQEIQRKVLTL 419 (468)
Q Consensus 347 ~~~~~~~~I--~---hGG~-~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~-~lG~g~~l~~~~~~~~t~~~l~~ai~~~ 419 (468)
..+++ +| + +.|. .++.||+++|+|+|+....+.. ..+.. . +.|...+. -+.++++++|.++
T Consensus 262 ~~ad~--~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~----~~i~~~~-~~g~~~~~-----~d~~~~~~~i~~l 329 (357)
T cd03795 262 AACDV--FVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGG----SYVNLHG-VTGLVVPP-----GDPAALAEAIRRL 329 (357)
T ss_pred HhCCE--EEeCCcccccccchHHHHHHHcCCCEEecCCCCch----hHHhhCC-CceEEeCC-----CCHHHHHHHHHHH
Confidence 55655 55 3 2343 4799999999999997544333 33332 3 67877765 4699999999999
Q ss_pred hcChHHHHHHHH
Q 012212 420 LKNDDIRSNSLK 431 (468)
Q Consensus 420 l~~~~~r~~a~~ 431 (468)
++|++.+++..+
T Consensus 330 ~~~~~~~~~~~~ 341 (357)
T cd03795 330 LEDPELRERLGE 341 (357)
T ss_pred HHCHHHHHHHHH
Confidence 999875554443
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.15 E-value=8.1e-08 Score=92.67 Aligned_cols=83 Identities=17% Similarity=0.207 Sum_probs=62.7
Q ss_pred CCCceEEcccChHH---HhcCCCCCcee----eccCchhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeeccC
Q 012212 331 SNRGKIVEWAPQEK---VLGHSSVACFI----SHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADE 403 (468)
Q Consensus 331 ~~nv~~~~~~p~~~---ll~~~~~~~~I----~hGG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~~ 403 (468)
.+|+.+.+++++.+ ++..+++ +| +-|..+++.||+++|+|+|+.+. ......+++. +.|...+.
T Consensus 258 ~~~v~~~g~~~~~~~~~~~~~ad~--~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~----~~~~~~~~~~-~~g~~~~~-- 328 (377)
T cd03798 258 EDRVTFLGAVPHEEVPAYYAAADV--FVLPSLREGFGLVLLEAMACGLPVVATDV----GGIPEIITDG-ENGLLVPP-- 328 (377)
T ss_pred cceEEEeCCCCHHHHHHHHHhcCe--eecchhhccCChHHHHHHhcCCCEEEecC----CChHHHhcCC-cceeEECC--
Confidence 57888899999754 5655555 66 33556889999999999998754 3455566663 66777765
Q ss_pred CCccCHHHHHHHHHHHhcChHH
Q 012212 404 NGIITRQEIQRKVLTLLKNDDI 425 (468)
Q Consensus 404 ~~~~t~~~l~~ai~~~l~~~~~ 425 (468)
-+.+++.++|.+++++++.
T Consensus 329 ---~~~~~l~~~i~~~~~~~~~ 347 (377)
T cd03798 329 ---GDPEALAEAILRLLADPWL 347 (377)
T ss_pred ---CCHHHHHHHHHHHhcCcHH
Confidence 4699999999999999884
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. |
| >TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.9e-09 Score=104.48 Aligned_cols=136 Identities=12% Similarity=0.156 Sum_probs=84.0
Q ss_pred cEEEEEecccccCCHHHHHHHHHHHHhC-----CCCEEEEEcCCCCCCcccCCchhHHHHh--CCCceEEcccChH---H
Q 012212 275 SVVYVAFGSVAVLSQQQFAELALGLESL-----QKPFLWVIRQDFMNGSRAKFPDGFIERV--SNRGKIVEWAPQE---K 344 (468)
Q Consensus 275 ~vv~vs~Gs~~~~~~~~~~~~~~a~~~~-----~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~nv~~~~~~p~~---~ 344 (468)
++++++.+.... ..+.+..+++++.++ +.++++...+. ......+.+.. .+|+++.+.+++. .
T Consensus 198 ~~vl~~~hr~~~-~~k~~~~ll~a~~~l~~~~~~~~~vi~~~~~------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 270 (365)
T TIGR00236 198 RYILLTLHRREN-VGEPLENIFKAIREIVEEFEDVQIVYPVHLN------PVVREPLHKHLGDSKRVHLIEPLEYLDFLN 270 (365)
T ss_pred CEEEEecCchhh-hhhHHHHHHHHHHHHHHHCCCCEEEEECCCC------hHHHHHHHHHhCCCCCEEEECCCChHHHHH
Confidence 467666543321 124466777776553 33444443322 01111122222 3678888777654 4
Q ss_pred HhcCCCCCceeeccCchhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeeccCCCccCHHHHHHHHHHHhcChH
Q 012212 345 VLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGIITRQEIQRKVLTLLKNDD 424 (468)
Q Consensus 345 ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~~~ 424 (468)
++.+++ ++|+..|.. +.||.++|+|+|+++..++++. +.+. |.++.++ .++++|.+++.++++|++
T Consensus 271 ~l~~ad--~vv~~Sg~~-~~EA~a~g~PvI~~~~~~~~~e----~~~~-g~~~lv~------~d~~~i~~ai~~ll~~~~ 336 (365)
T TIGR00236 271 LAANSH--LILTDSGGV-QEEAPSLGKPVLVLRDTTERPE----TVEA-GTNKLVG------TDKENITKAAKRLLTDPD 336 (365)
T ss_pred HHHhCC--EEEECChhH-HHHHHHcCCCEEECCCCCCChH----HHhc-CceEEeC------CCHHHHHHHHHHHHhChH
Confidence 565554 499987654 7999999999999876555553 2334 7776653 368999999999999988
Q ss_pred HHHHHHH
Q 012212 425 IRSNSLK 431 (468)
Q Consensus 425 ~r~~a~~ 431 (468)
.+++...
T Consensus 337 ~~~~~~~ 343 (365)
T TIGR00236 337 EYKKMSN 343 (365)
T ss_pred HHHHhhh
Confidence 7766543
|
Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other. |
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.13 E-value=2.1e-07 Score=91.24 Aligned_cols=85 Identities=12% Similarity=0.159 Sum_probs=61.1
Q ss_pred CCCceEEcccChHH---HhcCCCCCceeec---cC-chhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeeccC
Q 012212 331 SNRGKIVEWAPQEK---VLGHSSVACFISH---CG-WNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADE 403 (468)
Q Consensus 331 ~~nv~~~~~~p~~~---ll~~~~~~~~I~h---GG-~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~~ 403 (468)
.++|++.+++|+.+ ++..+++ ++.. -| ..++.||+++|+|+|+.-. ......+... +.|...+
T Consensus 279 ~~~V~f~g~~~~~~~~~~l~~ad~--~l~~s~~E~~g~~~lEAma~G~PvI~s~~----~~~~e~i~~~-~~g~~~~--- 348 (392)
T cd03805 279 EDQVIFLPSISDSQKELLLSSARA--LLYTPSNEHFGIVPLEAMYAGKPVIACNS----GGPLETVVDG-ETGFLCE--- 348 (392)
T ss_pred CceEEEeCCCChHHHHHHHhhCeE--EEECCCcCCCCchHHHHHHcCCCEEEECC----CCcHHHhccC-CceEEeC---
Confidence 56889999999864 5666655 6642 22 3578999999999998743 3344556553 5677664
Q ss_pred CCccCHHHHHHHHHHHhcChHHHHH
Q 012212 404 NGIITRQEIQRKVLTLLKNDDIRSN 428 (468)
Q Consensus 404 ~~~~t~~~l~~ai~~~l~~~~~r~~ 428 (468)
.+.++++++|.++++|++.+++
T Consensus 349 ---~~~~~~a~~i~~l~~~~~~~~~ 370 (392)
T cd03805 349 ---PTPEEFAEAMLKLANDPDLADR 370 (392)
T ss_pred ---CCHHHHHHHHHHHHhChHHHHH
Confidence 3589999999999999875444
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. |
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.13 E-value=7.8e-08 Score=91.81 Aligned_cols=94 Identities=15% Similarity=0.257 Sum_probs=65.0
Q ss_pred CCCceEEcccCh-HHHhcCCCCCceeeccC----chhHHHhhhcCCceeccccccchhhhHHHHHHHhh-ceeEeeccCC
Q 012212 331 SNRGKIVEWAPQ-EKVLGHSSVACFISHCG----WNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWK-IGLQFFADEN 404 (468)
Q Consensus 331 ~~nv~~~~~~p~-~~ll~~~~~~~~I~hGG----~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG-~g~~l~~~~~ 404 (468)
.+++++.++... ..++..+++ +|.-.. .+++.||+++|+|+|+.+..+.+ ..+... | .|..++.
T Consensus 234 ~~~v~~~g~~~~~~~~~~~ad~--~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~----~~~~~~-~~~g~~~~~--- 303 (348)
T cd03820 234 EDRVILLGFTKNIEEYYAKASI--FVLTSRFEGFPMVLLEAMAFGLPVISFDCPTGP----SEIIED-GVNGLLVPN--- 303 (348)
T ss_pred CCeEEEcCCcchHHHHHHhCCE--EEeCccccccCHHHHHHHHcCCCEEEecCCCch----Hhhhcc-CcceEEeCC---
Confidence 456777776433 557766655 776542 57899999999999987543332 233343 5 7877765
Q ss_pred CccCHHHHHHHHHHHhcChHHHHHHHHHHHHH
Q 012212 405 GIITRQEIQRKVLTLLKNDDIRSNSLKLKEVA 436 (468)
Q Consensus 405 ~~~t~~~l~~ai~~~l~~~~~r~~a~~l~~~~ 436 (468)
.+.+++.++|.++++|++.+++..+-+..+
T Consensus 304 --~~~~~~~~~i~~ll~~~~~~~~~~~~~~~~ 333 (348)
T cd03820 304 --GDVEALAEALLRLMEDEELRKRMGANARES 333 (348)
T ss_pred --CCHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 468999999999999998776665554433
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. |
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=99.12 E-value=1.3e-07 Score=99.50 Aligned_cols=404 Identities=11% Similarity=0.067 Sum_probs=199.4
Q ss_pred CCCEEEEEcCCCc---------------cChHHHHHHHHHHHHCC--CEEEEEECCcchHHHHH-hhhh-----------
Q 012212 3 RQPHVLVIPYPAQ---------------GHVAPLMKLATKIAERA--IKVTVVNTQFIHKKIIA-SLQE----------- 53 (468)
Q Consensus 3 ~~~~Il~~~~~~~---------------GH~~p~~~LA~~L~~rG--H~Vt~~~~~~~~~~i~~-~~~~----------- 53 (468)
+.+.|++++..+. |+..=...||++|+++| |+|.++|-......+.. ++..
T Consensus 168 ~~~~I~liS~HG~~~~~~~elg~~~DtGGq~vYV~ELAraLa~~~gv~~Vdl~TR~~~~~~~~~~y~~p~e~~~~~~~~~ 247 (1050)
T TIGR02468 168 KKLYIVLISLHGLVRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDWSYGEPTEMLTPRSSEN 247 (1050)
T ss_pred CceEEEEEccccCccccCcccCCCCCCCChHHHHHHHHHHHHhCCCCCEEEEEeCCcCccccccccCCcccccccccccc
Confidence 4577877754432 35555789999999998 99999998654322110 0000
Q ss_pred --hccCCCCCeEEEEcCCCCCCCcCCCCCHHHHHHHHHHHhhHHHHHH----HHHHhhCCCCCCceEEEecCCcc--cHH
Q 012212 54 --KAEDSSSQIKLVTIPDGLELQAADREDPLKLGESVARAMRGCLRDL----IEKINQSNDCEPIRCVIADVTVG--SAL 125 (468)
Q Consensus 54 --~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----l~~l~~~~~~~~pDlvi~D~~~~--~~~ 125 (468)
......+++.++.+|-+-.........++.++..|.+.+...+..+ .+.+... ....||+|-+..... .+.
T Consensus 248 ~~~~~~~~~g~rIvRip~GP~~~~l~Ke~L~~~l~ef~d~~l~~~~~~~~~~~~~~~~~-~~~~pDvIHaHyw~sG~aa~ 326 (1050)
T TIGR02468 248 DGDEMGESSGAYIIRIPFGPRDKYIPKEELWPYIPEFVDGALSHIVNMSKVLGEQIGSG-HPVWPYVIHGHYADAGDSAA 326 (1050)
T ss_pred ccccccCCCCeEEEEeccCCCCCCcCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccc-cCCCCCEEEECcchHHHHHH
Confidence 0001225788888886643221133344555555555544443322 2222110 012499999985444 666
Q ss_pred HHHHHhCCceEEEcccchHHHHHHhhhhhHhhcCCCCCCCcccccCCcccccCCCccCcccccCcCCCCCChhHHHHHHH
Q 012212 126 EVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGIIDPNGFAILNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGI 205 (468)
Q Consensus 126 ~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (468)
.+++.+|||+|....+......- ..+. .+.. .+.-.. ... .....
T Consensus 327 ~L~~~lgVP~V~T~HSLgr~K~~----------~ll~---------------~g~~-------~~~~~~-~~y--~~~~R 371 (1050)
T TIGR02468 327 LLSGALNVPMVLTGHSLGRDKLE----------QLLK---------------QGRM-------SKEEIN-STY--KIMRR 371 (1050)
T ss_pred HHHHhhCCCEEEECccchhhhhh----------hhcc---------------cccc-------cccccc-ccc--chHHH
Confidence 78899999988866543211000 0000 0000 000000 000 00001
Q ss_pred HHHHHHhhccccEEEEcCcccCChhhhc-------------------------cCCCceeeccccCCC-CCCC---CC--
Q 012212 206 ICAVIQAVKISNWIINNSVYELDSPACD-------------------------LIPNILPIGPLLASN-HSGD---LD-- 254 (468)
Q Consensus 206 ~~~~~~~~~~~~~~l~~~~~~le~~~~~-------------------------~~p~v~~vGpl~~~~-~~~~---~~-- 254 (468)
+.--...+..++.++..|..+-+-.+.- ..+++..|.|-+... ..+. ..
T Consensus 372 i~~Ee~~l~~Ad~VIasT~qE~~eq~~lY~~~~~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~ 451 (1050)
T TIGR02468 372 IEAEELSLDASEIVITSTRQEIEEQWGLYDGFDVILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGE 451 (1050)
T ss_pred HHHHHHHHHhcCEEEEeCHHHHHHHHHHhccCCchhhhhhhhhhcccccccccCCCCeEEeCCCCcHHHccCCCccccch
Confidence 1111123557888888887665421000 123444443322210 0000 00
Q ss_pred ------CCC---CCCCCchhhhhhcccCccEEEEEecccccCCHHHHHHHHHHHHhCC-----CCEEEEEcCCCCCCccc
Q 012212 255 ------GNF---WSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALGLESLQ-----KPFLWVIRQDFMNGSRA 320 (468)
Q Consensus 255 ------~~~---~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~a~~~~~-----~~~l~~~~~~~~~~~~~ 320 (468)
... +....++..|+.. ++++ +++..|... +.+-+..+++|+..+. ..+.++++.+...+...
T Consensus 452 ~~~~~~~~~~~~~~~~~~l~r~~~~-pdkp-vIL~VGRL~--p~KGi~~LIeAf~~L~~l~~~~nL~LIiG~gdd~d~l~ 527 (1050)
T TIGR02468 452 TEGNEEHPAKPDPPIWSEIMRFFTN-PRKP-MILALARPD--PKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMS 527 (1050)
T ss_pred hcccccccccccchhhHHHHhhccc-CCCc-EEEEEcCCc--cccCHHHHHHHHHHhHhhccCCCEEEEEecCchhhhhh
Confidence 000 0011234456543 3333 445557653 3334556677665442 24444554331000000
Q ss_pred ----CCchhH---HHH--hCCCceEEcccChHH---HhcCCC--CCceeec---cCc-hhHHHhhhcCCceeccccccch
Q 012212 321 ----KFPDGF---IER--VSNRGKIVEWAPQEK---VLGHSS--VACFISH---CGW-NSTMEGLSMGVPFLCWPYFSDQ 382 (468)
Q Consensus 321 ----~~~~~~---~~~--~~~nv~~~~~~p~~~---ll~~~~--~~~~I~h---GG~-~s~~eal~~GvP~v~~P~~~DQ 382 (468)
..-..+ .++ +.++|.+.+++++.+ ++..++ .++||.- =|. .++.||+++|+|+|+....
T Consensus 528 ~~~~~~l~~L~~li~~lgL~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvG--- 604 (1050)
T TIGR02468 528 SGSSSVLTSVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNG--- 604 (1050)
T ss_pred ccchHHHHHHHHHHHHhCCCCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCC---
Confidence 000111 112 257788889988765 443331 2347764 343 6899999999999998542
Q ss_pred hhhHHHHHHHhhceeEeeccCCCccCHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhh
Q 012212 383 YQNRNYICEAWKIGLQFFADENGIITRQEIQRKVLTLLKNDDIRSNSLKLKEVARKSLLGGGSSFRNFESFISDIKML 460 (468)
Q Consensus 383 ~~na~rv~~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 460 (468)
.....++.. .-|+.++. -+.+.|+++|.++++|++.+++..+-+.+... .=+-...++++++.+..+
T Consensus 605 -G~~EII~~g-~nGlLVdP-----~D~eaLA~AL~~LL~Dpelr~~m~~~gr~~v~----~FSWe~ia~~yl~~i~~~ 671 (1050)
T TIGR02468 605 -GPVDIHRVL-DNGLLVDP-----HDQQAIADALLKLVADKQLWAECRQNGLKNIH----LFSWPEHCKTYLSRIASC 671 (1050)
T ss_pred -CcHHHhccC-CcEEEECC-----CCHHHHHHHHHHHhhCHHHHHHHHHHHHHHHH----HCCHHHHHHHHHHHHHHH
Confidence 334444442 56888876 46899999999999998866555444333222 113344555555555443
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.8e-07 Score=92.96 Aligned_cols=87 Identities=14% Similarity=0.155 Sum_probs=63.1
Q ss_pred CCCceEEcccChHHH---hcCC--CCCceeecc---C-chhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeec
Q 012212 331 SNRGKIVEWAPQEKV---LGHS--SVACFISHC---G-WNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFA 401 (468)
Q Consensus 331 ~~nv~~~~~~p~~~l---l~~~--~~~~~I~hG---G-~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~ 401 (468)
.++|++.+++++.++ +..+ ++++||... | ..++.||+++|+|+|+.. .......+.+. ..|+.++.
T Consensus 316 ~~~V~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~----~gg~~eiv~~~-~~G~lv~~ 390 (439)
T TIGR02472 316 YGKVAYPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACGLPIVATD----DGGPRDIIANC-RNGLLVDV 390 (439)
T ss_pred CceEEecCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhCCCEEEeC----CCCcHHHhcCC-CcEEEeCC
Confidence 577888888887654 5433 235587643 3 469999999999999884 44456666553 56888776
Q ss_pred cCCCccCHHHHHHHHHHHhcChHHHH
Q 012212 402 DENGIITRQEIQRKVLTLLKNDDIRS 427 (468)
Q Consensus 402 ~~~~~~t~~~l~~ai~~~l~~~~~r~ 427 (468)
-+.++++++|.++++|++.++
T Consensus 391 -----~d~~~la~~i~~ll~~~~~~~ 411 (439)
T TIGR02472 391 -----LDLEAIASALEDALSDSSQWQ 411 (439)
T ss_pred -----CCHHHHHHHHHHHHhCHHHHH
Confidence 468999999999999987543
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. |
| >PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length | Back alignment and domain information |
|---|
Probab=99.07 E-value=3.1e-07 Score=85.92 Aligned_cols=302 Identities=15% Similarity=0.053 Sum_probs=154.1
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCCCCCCCcCCCCCHHHH
Q 012212 5 PHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDGLELQAADREDPLKL 84 (468)
Q Consensus 5 ~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 84 (468)
|||.+--.. .-|+.-+..+.++|.++||+|.+.+-... .+.+.... -++++..+.... .+....
T Consensus 1 MkIwiDi~~-p~hvhfFk~~I~eL~~~GheV~it~R~~~--~~~~LL~~------yg~~y~~iG~~g-------~~~~~K 64 (335)
T PF04007_consen 1 MKIWIDITH-PAHVHFFKNIIRELEKRGHEVLITARDKD--ETEELLDL------YGIDYIVIGKHG-------DSLYGK 64 (335)
T ss_pred CeEEEECCC-chHHHHHHHHHHHHHhCCCEEEEEEeccc--hHHHHHHH------cCCCeEEEcCCC-------CCHHHH
Confidence 566654322 24999999999999999999999988653 22222111 456666665321 122222
Q ss_pred HHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCcccHHHHHHHhCCceEEEcccchHHHHHHhhhhhHhhcCCCCCC
Q 012212 85 GESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVGSALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGIIDPN 164 (468)
Q Consensus 85 ~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 164 (468)
+....... ..+++.+++ .+||++|+- ....+..+|..+|+|+|.+.-..........
T Consensus 65 l~~~~~R~----~~l~~~~~~----~~pDv~is~-~s~~a~~va~~lgiP~I~f~D~e~a~~~~~L-------------- 121 (335)
T PF04007_consen 65 LLESIERQ----YKLLKLIKK----FKPDVAISF-GSPEAARVAFGLGIPSIVFNDTEHAIAQNRL-------------- 121 (335)
T ss_pred HHHHHHHH----HHHHHHHHh----hCCCEEEec-CcHHHHHHHHHhCCCeEEEecCchhhcccee--------------
Confidence 22222222 233333333 569999974 4456778999999999998764332211000
Q ss_pred CcccccCCcccccCCCccCcccccCcCCCCCChhHHHHHHHHHHHHHhhccccEEE-EcCcccCChhhhccCCCceeecc
Q 012212 165 GFAILNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWII-NNSVYELDSPACDLIPNILPIGP 243 (468)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~le~~~~~~~p~v~~vGp 243 (468)
..| .......+.. .. ...+. ....-+.+. .++..++-+- .++.
T Consensus 122 -----------t~P---la~~i~~P~~-~~-----~~~~~-------~~G~~~~i~~y~G~~E~ayl-~~F~-------- 165 (335)
T PF04007_consen 122 -----------TLP---LADVIITPEA-IP-----KEFLK-------RFGAKNQIRTYNGYKELAYL-HPFK-------- 165 (335)
T ss_pred -----------ehh---cCCeeECCcc-cC-----HHHHH-------hcCCcCCEEEECCeeeEEee-cCCC--------
Confidence 000 0000001100 00 00000 000001121 3333333222 1111
Q ss_pred ccCCCCCCCCCCCCCCCCCchhhhhhcccCccEEEEEeccc----ccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCcc
Q 012212 244 LLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSV----AVLSQQQFAELALGLESLQKPFLWVIRQDFMNGSR 319 (468)
Q Consensus 244 l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~----~~~~~~~~~~~~~a~~~~~~~~l~~~~~~~~~~~~ 319 (468)
.+++..+-+.. ++.+.|++-+-+. .......+..+++.+++.+..+++.....
T Consensus 166 ----------------Pd~~vl~~lg~-~~~~yIvvR~~~~~A~y~~~~~~i~~~ii~~L~~~~~~vV~ipr~~------ 222 (335)
T PF04007_consen 166 ----------------PDPEVLKELGL-DDEPYIVVRPEAWKASYDNGKKSILPEIIEELEKYGRNVVIIPRYE------ 222 (335)
T ss_pred ----------------CChhHHHHcCC-CCCCEEEEEeccccCeeecCccchHHHHHHHHHhhCceEEEecCCc------
Confidence 12222233332 2345677766553 11244567788999988887644443322
Q ss_pred cCCchhHHHHhCCCceEE-cccChHHHhcCCCCCceeeccCchhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeE
Q 012212 320 AKFPDGFIERVSNRGKIV-EWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQ 398 (468)
Q Consensus 320 ~~~~~~~~~~~~~nv~~~-~~~p~~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~ 398 (468)
.. ..+.++. ++.+. .-+.-.+++.++++ +|+=|| ....||...|+|.|-+ +-++-...-+.+.+. |+ .
T Consensus 223 -~~-~~~~~~~--~~~i~~~~vd~~~Ll~~a~l--~Ig~gg-TMa~EAA~LGtPaIs~-~~g~~~~vd~~L~~~-Gl--l 291 (335)
T PF04007_consen 223 -DQ-RELFEKY--GVIIPPEPVDGLDLLYYADL--VIGGGG-TMAREAALLGTPAISC-FPGKLLAVDKYLIEK-GL--L 291 (335)
T ss_pred -ch-hhHHhcc--CccccCCCCCHHHHHHhcCE--EEeCCc-HHHHHHHHhCCCEEEe-cCCcchhHHHHHHHC-CC--e
Confidence 11 1121221 24443 55555689988877 999877 7789999999999965 222222222345553 54 3
Q ss_pred eeccCCCccCHHHHHHHHHHHh
Q 012212 399 FFADENGIITRQEIQRKVLTLL 420 (468)
Q Consensus 399 l~~~~~~~~t~~~l~~ai~~~l 420 (468)
... -+.+++.+.+++.+
T Consensus 292 ~~~-----~~~~ei~~~v~~~~ 308 (335)
T PF04007_consen 292 YHS-----TDPDEIVEYVRKNL 308 (335)
T ss_pred Eec-----CCHHHHHHHHHHhh
Confidence 332 45777776554433
|
They are found in archaea and some bacteria and have no known function. |
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.07 E-value=4.2e-07 Score=87.82 Aligned_cols=92 Identities=12% Similarity=0.028 Sum_probs=63.3
Q ss_pred CCCceEEcccChHH---HhcCCCCCceeecc---C-chhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeeccC
Q 012212 331 SNRGKIVEWAPQEK---VLGHSSVACFISHC---G-WNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADE 403 (468)
Q Consensus 331 ~~nv~~~~~~p~~~---ll~~~~~~~~I~hG---G-~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~~ 403 (468)
.+++++.+|+++.+ ++..+++ +|.-. | ..++.||+++|+|+|+.+. ......+.. +.|...+.
T Consensus 261 ~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~~~~~~--~~~~~~~~-- 330 (375)
T cd03821 261 EDRVTFTGMLYGEDKAAALADADL--FVLPSHSENFGIVVAEALACGTPVVTTDK----VPWQELIEY--GCGWVVDD-- 330 (375)
T ss_pred cceEEEcCCCChHHHHHHHhhCCE--EEeccccCCCCcHHHHHHhcCCCEEEcCC----CCHHHHhhc--CceEEeCC--
Confidence 57888889999654 5656655 65432 2 4789999999999999753 334444443 67766643
Q ss_pred CCccCHHHHHHHHHHHhcChHHHHHHHHHHHHH
Q 012212 404 NGIITRQEIQRKVLTLLKNDDIRSNSLKLKEVA 436 (468)
Q Consensus 404 ~~~~t~~~l~~ai~~~l~~~~~r~~a~~l~~~~ 436 (468)
+.+++.++|.++++|++.+++..+-+.+.
T Consensus 331 ----~~~~~~~~i~~l~~~~~~~~~~~~~~~~~ 359 (375)
T cd03821 331 ----DVDALAAALRRALELPQRLKAMGENGRAL 359 (375)
T ss_pred ----ChHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 45999999999999986555444444433
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. |
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.05 E-value=4.3e-07 Score=89.16 Aligned_cols=114 Identities=12% Similarity=-0.003 Sum_probs=68.1
Q ss_pred CCCceEEcccChHH---HhcCCCCCceee---ccCc-hhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeeccC
Q 012212 331 SNRGKIVEWAPQEK---VLGHSSVACFIS---HCGW-NSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADE 403 (468)
Q Consensus 331 ~~nv~~~~~~p~~~---ll~~~~~~~~I~---hGG~-~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~~ 403 (468)
.++|.+.+|+|+.+ ++..+++ +|. +-|. .++.||+++|+|+|+.... .....+.+ |.+...+
T Consensus 249 ~~~v~~~G~~~~~~~~~~l~~ad~--~v~pS~~E~~g~~~~EAma~G~PVI~s~~g----g~~e~i~~--~~~~~~~--- 317 (398)
T cd03796 249 QDRVELLGAVPHERVRDVLVQGHI--FLNTSLTEAFCIAIVEAASCGLLVVSTRVG----GIPEVLPP--DMILLAE--- 317 (398)
T ss_pred CCeEEEeCCCCHHHHHHHHHhCCE--EEeCChhhccCHHHHHHHHcCCCEEECCCC----CchhheeC--CceeecC---
Confidence 46788899998754 6655555 764 3344 4999999999999997653 33344443 4443322
Q ss_pred CCccCHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhhc
Q 012212 404 NGIITRQEIQRKVLTLLKNDDIRSNSLKLKEVARKSLLGGGSSFRNFESFISDIKMLI 461 (468)
Q Consensus 404 ~~~~t~~~l~~ai~~~l~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 461 (468)
.+.+++.+++.+++++..-++ .+.+..+..+.+.=|-...++++++..+...
T Consensus 318 ---~~~~~l~~~l~~~l~~~~~~~---~~~~~~~~~~~~~fs~~~~~~~~~~~y~~l~ 369 (398)
T cd03796 318 ---PDVESIVRKLEEAISILRTGK---HDPWSFHNRVKKMYSWEDVAKRTEKVYDRIL 369 (398)
T ss_pred ---CCHHHHHHHHHHHHhChhhhh---hHHHHHHHHHHhhCCHHHHHHHHHHHHHHHh
Confidence 368999999999998644221 1112222222223344555666665555443
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. |
| >cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.4e-08 Score=98.32 Aligned_cols=136 Identities=15% Similarity=0.131 Sum_probs=85.8
Q ss_pred ccEEEEEecccccC-CHHHHHHHHHHHHhCCCC-EEEEEcCCCCCCcccCCchhHHH---Hh---CCCceEEcccChH--
Q 012212 274 RSVVYVAFGSVAVL-SQQQFAELALGLESLQKP-FLWVIRQDFMNGSRAKFPDGFIE---RV---SNRGKIVEWAPQE-- 343 (468)
Q Consensus 274 ~~vv~vs~Gs~~~~-~~~~~~~~~~a~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~---~~---~~nv~~~~~~p~~-- 343 (468)
++.++++.|+.... ..+.+..+++++.++..+ +.++..+. ......+.+ +. .+|+++.++.++.
T Consensus 198 ~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~~~~vi~~~~------~~~~~~l~~~~~~~~~~~~~v~~~~~~~~~~~ 271 (363)
T cd03786 198 KKYILVTLHRVENVDDGEQLEEILEALAELAEEDVPVVFPNH------PRTRPRIREAGLEFLGHHPNVLLISPLGYLYF 271 (363)
T ss_pred CCEEEEEeCCccccCChHHHHHHHHHHHHHHhcCCEEEEECC------CChHHHHHHHHHhhccCCCCEEEECCcCHHHH
Confidence 45778888775432 456677888888765432 44444332 011122222 11 3678887766654
Q ss_pred -HHhcCCCCCceeeccCchhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeeccCCCccCHHHHHHHHHHHhcC
Q 012212 344 -KVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGIITRQEIQRKVLTLLKN 422 (468)
Q Consensus 344 -~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~ 422 (468)
.++..+ +++|+..| |.+.||++.|+|+|+++...+ +..+.+. |++..+. -+.++|.++|.++++|
T Consensus 272 ~~l~~~a--d~~v~~Sg-gi~~Ea~~~g~PvI~~~~~~~----~~~~~~~-g~~~~~~------~~~~~i~~~i~~ll~~ 337 (363)
T cd03786 272 LLLLKNA--DLVLTDSG-GIQEEASFLGVPVLNLRDRTE----RPETVES-GTNVLVG------TDPEAILAAIEKLLSD 337 (363)
T ss_pred HHHHHcC--cEEEEcCc-cHHhhhhhcCCCEEeeCCCCc----cchhhhe-eeEEecC------CCHHHHHHHHHHHhcC
Confidence 456445 55999999 778899999999999864322 2233443 6665543 2488999999999998
Q ss_pred hHHHHHH
Q 012212 423 DDIRSNS 429 (468)
Q Consensus 423 ~~~r~~a 429 (468)
+..+++.
T Consensus 338 ~~~~~~~ 344 (363)
T cd03786 338 EFAYSLM 344 (363)
T ss_pred chhhhcC
Confidence 7655443
|
The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st |
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.98 E-value=3e-07 Score=87.84 Aligned_cols=89 Identities=16% Similarity=0.229 Sum_probs=62.8
Q ss_pred CCCceEEcccCh-HHHhcCCCCCceeec----cCchhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeeccCCC
Q 012212 331 SNRGKIVEWAPQ-EKVLGHSSVACFISH----CGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENG 405 (468)
Q Consensus 331 ~~nv~~~~~~p~-~~ll~~~~~~~~I~h----GG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~~~~ 405 (468)
.+++++.++.+. ..++..+++ +|.- |..+++.||+++|+|+|+.. -......+.+. +.|...+.+
T Consensus 245 ~~~v~~~g~~~~~~~~~~~~d~--~i~ps~~e~~~~~~~Ea~~~G~PvI~~~----~~~~~e~i~~~-~~g~~~~~~--- 314 (353)
T cd03811 245 ADRVHFLGFQSNPYPYLKAADL--FVLSSRYEGFPNVLLEAMALGTPVVATD----CPGPREILEDG-ENGLLVPVG--- 314 (353)
T ss_pred CccEEEecccCCHHHHHHhCCE--EEeCcccCCCCcHHHHHHHhCCCEEEcC----CCChHHHhcCC-CceEEECCC---
Confidence 567888888765 567766665 6632 33578999999999999864 34666777774 788888763
Q ss_pred ccCHHHH---HHHHHHHhcChHHHHHHHH
Q 012212 406 IITRQEI---QRKVLTLLKNDDIRSNSLK 431 (468)
Q Consensus 406 ~~t~~~l---~~ai~~~l~~~~~r~~a~~ 431 (468)
+.+.+ .+++.+++.+++.++++..
T Consensus 315 --~~~~~~~~~~~i~~~~~~~~~~~~~~~ 341 (353)
T cd03811 315 --DEAALAAAALALLDLLLDPELRERLAA 341 (353)
T ss_pred --CHHHHHHHHHHHHhccCChHHHHHHHH
Confidence 46676 6677777777775554444
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. |
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Probab=98.97 E-value=7.7e-07 Score=85.69 Aligned_cols=86 Identities=17% Similarity=0.249 Sum_probs=62.8
Q ss_pred CCCceEEcccChHH---HhcCCCCCceee----------ccCchhHHHhhhcCCceeccccccchhhhHHHHHHHhhcee
Q 012212 331 SNRGKIVEWAPQEK---VLGHSSVACFIS----------HCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGL 397 (468)
Q Consensus 331 ~~nv~~~~~~p~~~---ll~~~~~~~~I~----------hGG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~ 397 (468)
++||++.+++|+.+ ++..+++ +|. -|..+++.||+++|+|+|+.+.. .....++.. ..|.
T Consensus 235 ~~~v~~~g~~~~~~l~~~~~~adi--~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~----~~~~~i~~~-~~g~ 307 (355)
T cd03799 235 EDRVTLLGAKSQEEVRELLRAADL--FVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVS----GIPELVEDG-ETGL 307 (355)
T ss_pred CCeEEECCcCChHHHHHHHHhCCE--EEecceecCCCCccCccHHHHHHHHcCCCEEecCCC----CcchhhhCC-CceE
Confidence 57889999998654 5555655 666 34457999999999999987542 233455552 4787
Q ss_pred EeeccCCCccCHHHHHHHHHHHhcChHHHHH
Q 012212 398 QFFADENGIITRQEIQRKVLTLLKNDDIRSN 428 (468)
Q Consensus 398 ~l~~~~~~~~t~~~l~~ai~~~l~~~~~r~~ 428 (468)
.++. -+.+++.++|.++++|+..+++
T Consensus 308 ~~~~-----~~~~~l~~~i~~~~~~~~~~~~ 333 (355)
T cd03799 308 LVPP-----GDPEALADAIERLLDDPELRRE 333 (355)
T ss_pred EeCC-----CCHHHHHHHHHHHHhCHHHHHH
Confidence 7765 3689999999999999875443
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. |
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.9e-06 Score=82.99 Aligned_cols=85 Identities=14% Similarity=0.168 Sum_probs=59.2
Q ss_pred CCCceEEcccCh-HHHhcCCCCCceeec----cC-chhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeeccCC
Q 012212 331 SNRGKIVEWAPQ-EKVLGHSSVACFISH----CG-WNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADEN 404 (468)
Q Consensus 331 ~~nv~~~~~~p~-~~ll~~~~~~~~I~h----GG-~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~~~ 404 (468)
.++|++.+|.+. ..++..+++ +|+= -| .+++.||+++|+|+|+.. -......+... +.|..++.
T Consensus 245 ~~~v~~~g~~~~~~~~l~~ad~--~i~ps~~~e~~~~~l~EA~a~G~PvI~~~----~~~~~e~i~~~-~~g~~~~~--- 314 (355)
T cd03819 245 QDRVTFVGHCSDMPAAYALADI--VVSASTEPEAFGRTAVEAQAMGRPVIASD----HGGARETVRPG-ETGLLVPP--- 314 (355)
T ss_pred cceEEEcCCcccHHHHHHhCCE--EEecCCCCCCCchHHHHHHhcCCCEEEcC----CCCcHHHHhCC-CceEEeCC---
Confidence 467888888543 557766666 5532 23 369999999999999873 34455666663 57888865
Q ss_pred CccCHHHHHHHHHHHh-cChHHHH
Q 012212 405 GIITRQEIQRKVLTLL-KNDDIRS 427 (468)
Q Consensus 405 ~~~t~~~l~~ai~~~l-~~~~~r~ 427 (468)
-+.+++.++|..++ .|++.++
T Consensus 315 --~~~~~l~~~i~~~~~~~~~~~~ 336 (355)
T cd03819 315 --GDAEALAQALDQILSLLPEGRA 336 (355)
T ss_pred --CCHHHHHHHHHHHHhhCHHHHH
Confidence 46999999996555 4555443
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. |
| >PLN02275 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=98.95 E-value=1.4e-06 Score=84.61 Aligned_cols=128 Identities=11% Similarity=-0.083 Sum_probs=73.4
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHHCCC-EEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCCCCCCCcCCCC
Q 012212 1 MSRQPHVLVIPYPAQGHVAPLMKLATKIAERAI-KVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDGLELQAADRE 79 (468)
Q Consensus 1 m~~~~~Il~~~~~~~GH~~p~~~LA~~L~~rGH-~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 79 (468)
|..+-|+.++..+-.|.-..+..++..|+++|| +|++++.+......+. ....+++++.++. ..... ...
T Consensus 1 ~~~~~~~~~~~~~~~g~~~r~~~~~~~l~~~~~~~v~vi~~~~~~~~~~~-------~~~~~v~v~r~~~-~~~~~-~~~ 71 (371)
T PLN02275 1 MGRRGRAAVVVLGDFGRSPRMQYHALSLARQASFQVDVVAYGGSEPIPAL-------LNHPSIHIHLMVQ-PRLLQ-RLP 71 (371)
T ss_pred CCCccEEEEEEecCCCCCHHHHHHHHHHHhcCCceEEEEEecCCCCCHHH-------hcCCcEEEEECCC-ccccc-ccc
Confidence 666677777777888999999999999999986 7999987654222121 1225688888875 21111 111
Q ss_pred CHHHHHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCc-c----cHHHHHHHhCCceEEEcc
Q 012212 80 DPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTV-G----SALEVAESMGIARAAVVP 140 (468)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~-~----~~~~~A~~lgiP~v~~~~ 140 (468)
.....+.++..... .+..++..+... ..+||+|++.... . .+..++...++|+++.+.
T Consensus 72 ~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h 134 (371)
T PLN02275 72 RVLYALALLLKVAI-QFLMLLWFLCVK--IPRPDVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWH 134 (371)
T ss_pred cchHHHHHHHHHHH-HHHHHHHHHHhh--CCCCCEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcC
Confidence 12222222221111 122222221111 1579999985322 2 233456678999987654
|
|
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.93 E-value=4.9e-07 Score=87.34 Aligned_cols=87 Identities=13% Similarity=0.208 Sum_probs=61.6
Q ss_pred CCCceEE-cccChH---HHhcCCCCCceee----c--cCchhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEee
Q 012212 331 SNRGKIV-EWAPQE---KVLGHSSVACFIS----H--CGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFF 400 (468)
Q Consensus 331 ~~nv~~~-~~~p~~---~ll~~~~~~~~I~----h--GG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~ 400 (468)
.+|+.+. .|+|+. .++..+++ +|. . |..+++.||+++|+|+|+.+..+ ...+... +.|..++
T Consensus 246 ~~~v~~~~~~~~~~~~~~~~~~ad~--~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-----~~~i~~~-~~g~~~~ 317 (366)
T cd03822 246 ADRVIFINRYLPDEELPELFSAADV--VVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-----AEEVLDG-GTGLLVP 317 (366)
T ss_pred CCcEEEecCcCCHHHHHHHHhhcCE--EEecccccccccchHHHHHHHcCCCEEecCCCC-----hheeeeC-CCcEEEc
Confidence 5788888 558874 46655554 763 2 34578999999999999986543 3334454 7787776
Q ss_pred ccCCCccCHHHHHHHHHHHhcChHHHHHHH
Q 012212 401 ADENGIITRQEIQRKVLTLLKNDDIRSNSL 430 (468)
Q Consensus 401 ~~~~~~~t~~~l~~ai~~~l~~~~~r~~a~ 430 (468)
. -+.+++.+++.++++|++.+++..
T Consensus 318 ~-----~d~~~~~~~l~~l~~~~~~~~~~~ 342 (366)
T cd03822 318 P-----GDPAALAEAIRRLLADPELAQALR 342 (366)
T ss_pred C-----CCHHHHHHHHHHHHcChHHHHHHH
Confidence 5 358999999999999876554333
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. |
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=98.93 E-value=5.1e-07 Score=87.50 Aligned_cols=87 Identities=15% Similarity=0.161 Sum_probs=65.4
Q ss_pred CCCceEEcccChHH---HhcCCCCCceeec----------cCchhHHHhhhcCCceeccccccchhhhHHHHHHHhhcee
Q 012212 331 SNRGKIVEWAPQEK---VLGHSSVACFISH----------CGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGL 397 (468)
Q Consensus 331 ~~nv~~~~~~p~~~---ll~~~~~~~~I~h----------GG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~ 397 (468)
.+++++.+++|+.+ ++..+++ +|.- |-.+++.||+++|+|+|+.+.. .++..+.+. +.|.
T Consensus 244 ~~~v~~~g~~~~~~l~~~~~~ad~--~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~----~~~e~i~~~-~~g~ 316 (367)
T cd05844 244 GGRVTFLGAQPHAEVRELMRRARI--FLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHG----GIPEAVEDG-ETGL 316 (367)
T ss_pred CCeEEECCCCCHHHHHHHHHhCCE--EEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCC----CchhheecC-CeeE
Confidence 57788889998755 4656655 6642 2357999999999999987653 466666664 7888
Q ss_pred EeeccCCCccCHHHHHHHHHHHhcChHHHHHH
Q 012212 398 QFFADENGIITRQEIQRKVLTLLKNDDIRSNS 429 (468)
Q Consensus 398 ~l~~~~~~~~t~~~l~~ai~~~l~~~~~r~~a 429 (468)
.++. -+.+++.++|.++++|++.+++.
T Consensus 317 ~~~~-----~d~~~l~~~i~~l~~~~~~~~~~ 343 (367)
T cd05844 317 LVPE-----GDVAALAAALGRLLADPDLRARM 343 (367)
T ss_pred EECC-----CCHHHHHHHHHHHHcCHHHHHHH
Confidence 8875 46899999999999998755443
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.93 E-value=3.2e-07 Score=88.67 Aligned_cols=134 Identities=17% Similarity=0.164 Sum_probs=79.8
Q ss_pred EEEEEecccccCCHHHHHHHHHHHHhCCCCEE-EEEcCCCCCCcccCCchhHHHH-----hCCCceEEcccCh--HHHhc
Q 012212 276 VVYVAFGSVAVLSQQQFAELALGLESLQKPFL-WVIRQDFMNGSRAKFPDGFIER-----VSNRGKIVEWAPQ--EKVLG 347 (468)
Q Consensus 276 vv~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~-----~~~nv~~~~~~p~--~~ll~ 347 (468)
.+++..|.........+..+++++.+....+- +.++.+ +..+.+.+. .+++|++.+|+++ ..+-.
T Consensus 181 ~~i~~~Grl~~~~~k~~~~l~~a~~~~~~~~~l~ivG~g-------~~~~~l~~~~~~~~l~~~v~f~G~~~~~~~~~~~ 253 (359)
T PRK09922 181 AVFLYVGRLKFEGQKNVKELFDGLSQTTGEWQLHIIGDG-------SDFEKCKAYSRELGIEQRIIWHGWQSQPWEVVQQ 253 (359)
T ss_pred cEEEEEEEEecccCcCHHHHHHHHHhhCCCeEEEEEeCC-------ccHHHHHHHHHHcCCCCeEEEecccCCcHHHHHH
Confidence 45566676532233445667777766533332 233333 111222221 2578889999854 33221
Q ss_pred -CCCCCceeec----cCchhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeeccCCCccCHHHHHHHHHHHhcC
Q 012212 348 -HSSVACFISH----CGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGIITRQEIQRKVLTLLKN 422 (468)
Q Consensus 348 -~~~~~~~I~h----GG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~ 422 (468)
...++++|.. |-..++.||+++|+|+|+.-. .......++.. ..|..++. -+.++++++|.++++|
T Consensus 254 ~~~~~d~~v~~s~~Egf~~~~lEAma~G~Pvv~s~~---~~g~~eiv~~~-~~G~lv~~-----~d~~~la~~i~~l~~~ 324 (359)
T PRK09922 254 KIKNVSALLLTSKFEGFPMTLLEAMSYGIPCISSDC---MSGPRDIIKPG-LNGELYTP-----GNIDEFVGKLNKVISG 324 (359)
T ss_pred HHhcCcEEEECCcccCcChHHHHHHHcCCCEEEeCC---CCChHHHccCC-CceEEECC-----CCHHHHHHHHHHHHhC
Confidence 1233446643 335799999999999998741 22233445553 56877765 4799999999999999
Q ss_pred hHH
Q 012212 423 DDI 425 (468)
Q Consensus 423 ~~~ 425 (468)
++.
T Consensus 325 ~~~ 327 (359)
T PRK09922 325 EVK 327 (359)
T ss_pred ccc
Confidence 983
|
|
| >PRK14089 ipid-A-disaccharide synthase; Provisional | Back alignment and domain information |
|---|
Probab=98.93 E-value=3.3e-07 Score=86.54 Aligned_cols=144 Identities=16% Similarity=0.154 Sum_probs=85.7
Q ss_pred cEEEEEecccccCCHHHHHHHHHHHHhCCCC-EEEEEcCCCCCCcccCCchhHHHHhCC--CceEEcccChHHHhcCCCC
Q 012212 275 SVVYVAFGSVAVLSQQQFAELALGLESLQKP-FLWVIRQDFMNGSRAKFPDGFIERVSN--RGKIVEWAPQEKVLGHSSV 351 (468)
Q Consensus 275 ~vv~vs~Gs~~~~~~~~~~~~~~a~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~--nv~~~~~~p~~~ll~~~~~ 351 (468)
++|.+--||....-...+-.++++..++..+ ..+.+.... .. +.+.+...+ .+.+.+ ...+++..+++
T Consensus 168 ~~I~llPGSR~~Ei~~llP~~~~aa~~L~~~~~~~~i~~a~------~~-~~i~~~~~~~~~~~~~~--~~~~~m~~aDl 238 (347)
T PRK14089 168 GTIAFMPGSRKSEIKRLMPIFKELAKKLEGKEKILVVPSFF------KG-KDLKEIYGDISEFEISY--DTHKALLEAEF 238 (347)
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCcEEEEeCCC------cH-HHHHHHHhcCCCcEEec--cHHHHHHhhhH
Confidence 5899988997443334444444555433222 333333220 11 222222221 333332 33567866655
Q ss_pred CceeeccCchhHHHhhhcCCceecccc--ccchhhhHHHHH---HHhhceeEee-------------ccCCCccCHHHHH
Q 012212 352 ACFISHCGWNSTMEGLSMGVPFLCWPY--FSDQYQNRNYIC---EAWKIGLQFF-------------ADENGIITRQEIQ 413 (468)
Q Consensus 352 ~~~I~hGG~~s~~eal~~GvP~v~~P~--~~DQ~~na~rv~---~~lG~g~~l~-------------~~~~~~~t~~~l~ 413 (468)
+|+-.|..|+ |+..+|+|+|+ ++ ..=|+.||+++. . .|+.-.+- -++ .|++.|.
T Consensus 239 --al~~SGT~TL-E~al~g~P~Vv-~Yk~~~lty~iak~lv~~~~-igL~Nii~~~~~~~~vvPEllQ~~---~t~~~la 310 (347)
T PRK14089 239 --AFICSGTATL-EAALIGTPFVL-AYKAKAIDYFIAKMFVKLKH-IGLANIFFDFLGKEPLHPELLQEF---VTVENLL 310 (347)
T ss_pred --HHhcCcHHHH-HHHHhCCCEEE-EEeCCHHHHHHHHHHHcCCe-eehHHHhcCCCcccccCchhhccc---CCHHHHH
Confidence 9999999999 99999999998 44 567889999988 5 36655552 244 8999999
Q ss_pred HHHHHHhcChHHHHHHHHHHHHH
Q 012212 414 RKVLTLLKNDDIRSNSLKLKEVA 436 (468)
Q Consensus 414 ~ai~~~l~~~~~r~~a~~l~~~~ 436 (468)
+++.+ +...++++...++.+.+
T Consensus 311 ~~i~~-~~~~~~~~~~~~l~~~l 332 (347)
T PRK14089 311 KAYKE-MDREKFFKKSKELREYL 332 (347)
T ss_pred HHHHH-HHHHHHHHHHHHHHHHh
Confidence 99987 22233444444444433
|
|
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.92 E-value=1.5e-06 Score=83.86 Aligned_cols=88 Identities=11% Similarity=0.075 Sum_probs=61.5
Q ss_pred CCCceEEcccCh-HHHhcCCCCCceeec----cCchhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeeccCCC
Q 012212 331 SNRGKIVEWAPQ-EKVLGHSSVACFISH----CGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENG 405 (468)
Q Consensus 331 ~~nv~~~~~~p~-~~ll~~~~~~~~I~h----GG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~~~~ 405 (468)
.+++++.++..+ .+++..+++ +|+- |-..++.||+++|+|+|+... ......+.. +.|.....
T Consensus 248 ~~~v~~~g~~~~~~~~~~~adi--~v~ps~~E~~~~~~lEAma~G~PvI~s~~----~~~~~~i~~--~~~~~~~~---- 315 (358)
T cd03812 248 EDKVIFLGVRNDVPELLQAMDV--FLFPSLYEGLPLVLIEAQASGLPCILSDT----ITKEVDLTD--LVKFLSLD---- 315 (358)
T ss_pred CCcEEEecccCCHHHHHHhcCE--EEecccccCCCHHHHHHHHhCCCEEEEcC----Cchhhhhcc--CccEEeCC----
Confidence 567888887544 567766655 6643 446899999999999998744 334444444 45544433
Q ss_pred ccCHHHHHHHHHHHhcChHHHHHHHH
Q 012212 406 IITRQEIQRKVLTLLKNDDIRSNSLK 431 (468)
Q Consensus 406 ~~t~~~l~~ai~~~l~~~~~r~~a~~ 431 (468)
-+.++++++|.++++|++.+++...
T Consensus 316 -~~~~~~a~~i~~l~~~~~~~~~~~~ 340 (358)
T cd03812 316 -ESPEIWAEEILKLKSEDRRERSSES 340 (358)
T ss_pred -CCHHHHHHHHHHHHhCcchhhhhhh
Confidence 3579999999999999996665433
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). |
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.91 E-value=1.1e-06 Score=83.93 Aligned_cols=126 Identities=10% Similarity=0.090 Sum_probs=76.6
Q ss_pred EEEecccccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCcccCCchhHHHH--hCCCceEEcccChHH---HhcCCCCC
Q 012212 278 YVAFGSVAVLSQQQFAELALGLESLQKPFLWVIRQDFMNGSRAKFPDGFIER--VSNRGKIVEWAPQEK---VLGHSSVA 352 (468)
Q Consensus 278 ~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~nv~~~~~~p~~~---ll~~~~~~ 352 (468)
.+..|... ...-...+++++.+.+.++++.-.+. ....+.....+. ..+++.+.+++++.+ +++.+++
T Consensus 174 i~~~Gr~~--~~Kg~~~li~~~~~~~~~l~i~G~~~----~~~~~~~~~~~~~~~~~~v~~~G~~~~~~~~~~~~~~d~- 246 (335)
T cd03802 174 LLFLGRIS--PEKGPHLAIRAARRAGIPLKLAGPVS----DPDYFYREIAPELLDGPDIEYLGEVGGAEKAELLGNARA- 246 (335)
T ss_pred EEEEEeec--cccCHHHHHHHHHhcCCeEEEEeCCC----CHHHHHHHHHHhcccCCcEEEeCCCCHHHHHHHHHhCcE-
Confidence 34456652 23334567777777777766554432 111111111112 257889999999854 5655655
Q ss_pred ceee----ccCc-hhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeeccCCCccCHHHHHHHHHHHhcCh
Q 012212 353 CFIS----HCGW-NSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGIITRQEIQRKVLTLLKND 423 (468)
Q Consensus 353 ~~I~----hGG~-~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~~ 423 (468)
++. +-|. .++.||+++|+|+|+.. ...+...+... ..|...+ ..+++.++|.+++++.
T Consensus 247 -~v~ps~~~E~~~~~~lEAma~G~PvI~~~----~~~~~e~i~~~-~~g~l~~-------~~~~l~~~l~~l~~~~ 309 (335)
T cd03802 247 -LLFPILWEEPFGLVMIEAMACGTPVIAFR----RGAVPEVVEDG-VTGFLVD-------SVEELAAAVARADRLD 309 (335)
T ss_pred -EEeCCcccCCcchHHHHHHhcCCCEEEeC----CCCchhheeCC-CcEEEeC-------CHHHHHHHHHHHhccH
Confidence 553 2343 58999999999999884 34445555542 3676653 2889999999987643
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. |
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.91 E-value=1.7e-06 Score=83.69 Aligned_cols=130 Identities=17% Similarity=0.207 Sum_probs=71.7
Q ss_pred EEEecccccCCHHHHHHHHHHHHhCC--CCEEEEEcCCCCCCcccCCchhHHH--HhCCCceEEcccChHH---HhcCCC
Q 012212 278 YVAFGSVAVLSQQQFAELALGLESLQ--KPFLWVIRQDFMNGSRAKFPDGFIE--RVSNRGKIVEWAPQEK---VLGHSS 350 (468)
Q Consensus 278 ~vs~Gs~~~~~~~~~~~~~~a~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~nv~~~~~~p~~~---ll~~~~ 350 (468)
++..|+.. ...-+..+++++.++. .+++++-.+. ....+...+.+ ...++|++.+++|+.+ ++..++
T Consensus 196 i~~~G~~~--~~Kg~~~li~a~~~l~~~~~l~ivG~~~----~~~~~~~~~~~~~~~~~~V~~~g~~~~~~~~~~~~~ad 269 (363)
T cd04955 196 YLLVGRIV--PENNIDDLIEAFSKSNSGKKLVIVGNAD----HNTPYGKLLKEKAAADPRIIFVGPIYDQELLELLRYAA 269 (363)
T ss_pred EEEEeccc--ccCCHHHHHHHHHhhccCceEEEEcCCC----CcchHHHHHHHHhCCCCcEEEccccChHHHHHHHHhCC
Confidence 34567763 2233455667666554 3443333221 01111111211 2357889999999865 444444
Q ss_pred CCceeeccC----c-hhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeeccCCCccCHHHHHHHHHHHhcChHH
Q 012212 351 VACFISHCG----W-NSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGIITRQEIQRKVLTLLKNDDI 425 (468)
Q Consensus 351 ~~~~I~hGG----~-~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~~~~ 425 (468)
+ ++.+.- . +++.||+++|+|+|+....+ +...++. .|...+.. +.+.++|.++++|++.
T Consensus 270 ~--~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~----~~e~~~~---~g~~~~~~-------~~l~~~i~~l~~~~~~ 333 (363)
T cd04955 270 L--FYLHGHSVGGTNPSLLEAMAYGCPVLASDNPF----NREVLGD---KAIYFKVG-------DDLASLLEELEADPEE 333 (363)
T ss_pred E--EEeCCccCCCCChHHHHHHHcCCCEEEecCCc----cceeecC---CeeEecCc-------hHHHHHHHHHHhCHHH
Confidence 4 655433 2 58999999999999875432 2222222 23333321 1299999999999865
Q ss_pred HHHH
Q 012212 426 RSNS 429 (468)
Q Consensus 426 r~~a 429 (468)
+++.
T Consensus 334 ~~~~ 337 (363)
T cd04955 334 VSAM 337 (363)
T ss_pred HHHH
Confidence 5443
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >TIGR02470 sucr_synth sucrose synthase | Back alignment and domain information |
|---|
Probab=98.88 E-value=1.2e-05 Score=82.99 Aligned_cols=92 Identities=9% Similarity=0.099 Sum_probs=61.1
Q ss_pred CCCceEEccc-Ch---HHHhcC-CC-CCceeec---cC-chhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEee
Q 012212 331 SNRGKIVEWA-PQ---EKVLGH-SS-VACFISH---CG-WNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFF 400 (468)
Q Consensus 331 ~~nv~~~~~~-p~---~~ll~~-~~-~~~~I~h---GG-~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~ 400 (468)
.++|++.++. +. ..++.+ ++ .++||.= =| .-++.||+++|+|+|+. +....+..|... .-|..++
T Consensus 618 ~g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT----~~GG~~EiV~dg-~tGfLVd 692 (784)
T TIGR02470 618 HGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFAT----RFGGPLEIIQDG-VSGFHID 692 (784)
T ss_pred CCeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCCEEEc----CCCCHHHHhcCC-CcEEEeC
Confidence 4678877764 32 234432 22 2347642 23 35899999999999987 444566667663 5688887
Q ss_pred ccCCCccCHHHHHHHHHHHh----cChHHHHHHHHH
Q 012212 401 ADENGIITRQEIQRKVLTLL----KNDDIRSNSLKL 432 (468)
Q Consensus 401 ~~~~~~~t~~~l~~ai~~~l----~~~~~r~~a~~l 432 (468)
. -++++++++|.+++ +|++.+++..+-
T Consensus 693 p-----~D~eaLA~aL~~ll~kll~dp~~~~~ms~~ 723 (784)
T TIGR02470 693 P-----YHGEEAAEKIVDFFEKCDEDPSYWQKISQG 723 (784)
T ss_pred C-----CCHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 6 46889999998875 688766654443
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria. |
| >PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=98.85 E-value=2.2e-06 Score=85.11 Aligned_cols=217 Identities=14% Similarity=0.069 Sum_probs=112.8
Q ss_pred cEEEEcCcccCChhhhccCCCceeec-cccCCCCCCCCCCCCCCCCCchhhhhhcccCccEEEEEecccccCCHHHHHHH
Q 012212 217 NWIINNSVYELDSPACDLIPNILPIG-PLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAEL 295 (468)
Q Consensus 217 ~~~l~~~~~~le~~~~~~~p~v~~vG-pl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~ 295 (468)
|.+++--+.|-++. ....-++.||| |+....... ...++..+.+.-.+++++|-+--||....=...+..+
T Consensus 363 D~ll~IfPFE~~~y-~~~gv~v~yVGHPL~d~i~~~-------~~~~~~r~~lgl~~~~~iIaLLPGSR~~EI~rllPv~ 434 (608)
T PRK01021 363 DLLLLILPFEQNLF-KDSPLRTVYLGHPLVETISSF-------SPNLSWKEQLHLPSDKPIVAAFPGSRRGDILRNLTIQ 434 (608)
T ss_pred hhheecCccCHHHH-HhcCCCeEEECCcHHhhcccC-------CCHHHHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHH
Confidence 45555544444444 45667899999 555442211 1122222333333456799999999754444455556
Q ss_pred HHHHH--hC--CCCEEEEEcCCCCCCcccCCchhHHHHhC-C---CceEEcccChHHHhcCCCCCceeeccCchhHHHhh
Q 012212 296 ALGLE--SL--QKPFLWVIRQDFMNGSRAKFPDGFIERVS-N---RGKIVEWAPQEKVLGHSSVACFISHCGWNSTMEGL 367 (468)
Q Consensus 296 ~~a~~--~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~---nv~~~~~~p~~~ll~~~~~~~~I~hGG~~s~~eal 367 (468)
+++.. .+ +.++++..... ...+.+.+... . .+.++.--...++++.+++ .+.-.|.. +.|+.
T Consensus 435 l~aa~~~~l~~~l~fvvp~a~~-------~~~~~i~~~~~~~~~~~~~ii~~~~~~~~m~aaD~--aLaaSGTa-TLEaA 504 (608)
T PRK01021 435 VQAFLASSLASTHQLLVSSANP-------KYDHLILEVLQQEGCLHSHIVPSQFRYELMRECDC--ALAKCGTI-VLETA 504 (608)
T ss_pred HHHHHHHHhccCeEEEEecCch-------hhHHHHHHHHhhcCCCCeEEecCcchHHHHHhcCe--eeecCCHH-HHHHH
Confidence 66665 33 23444432221 11122222221 1 2233311012567865655 88887765 68999
Q ss_pred hcCCceeccc-cccchhhhHHHHHH----H-------hhceeEeeccC-CCccCHHHHHHHHHHHhcChHHHHHHHHHHH
Q 012212 368 SMGVPFLCWP-YFSDQYQNRNYICE----A-------WKIGLQFFADE-NGIITRQEIQRKVLTLLKNDDIRSNSLKLKE 434 (468)
Q Consensus 368 ~~GvP~v~~P-~~~DQ~~na~rv~~----~-------lG~g~~l~~~~-~~~~t~~~l~~ai~~~l~~~~~r~~a~~l~~ 434 (468)
.+|+|||++= ...=-..-|+++.+ . +|-.+....-. ....|++.|.+++ ++|.|+++|++.++=-+
T Consensus 505 L~g~PmVV~YK~s~Lty~Iak~Lvki~i~yIsLpNIIagr~VvPEllqgQ~~~tpe~La~~l-~lL~d~~~r~~~~~~l~ 583 (608)
T PRK01021 505 LNQTPTIVTCQLRPFDTFLAKYIFKIILPAYSLPNIILGSTIFPEFIGGKKDFQPEEVAAAL-DILKTSQSKEKQKDACR 583 (608)
T ss_pred HhCCCEEEEEecCHHHHHHHHHHHhccCCeeehhHHhcCCCcchhhcCCcccCCHHHHHHHH-HHhcCHHHHHHHHHHHH
Confidence 9999999752 22222233444433 0 01111111110 0238999999997 88888876666665555
Q ss_pred HHHHHhcCCCchHHHHHH
Q 012212 435 VARKSLLGGGSSFRNFES 452 (468)
Q Consensus 435 ~~~~~~~~~g~~~~~~~~ 452 (468)
++++...+|-++.+.+-.
T Consensus 584 ~lr~~Lg~~~~~~~~~~~ 601 (608)
T PRK01021 584 DLYQAMNESASTMKECLS 601 (608)
T ss_pred HHHHHhcCCCCCHHHHHH
Confidence 556654445554444433
|
|
| >PLN02949 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.2e-05 Score=79.83 Aligned_cols=111 Identities=14% Similarity=0.139 Sum_probs=65.3
Q ss_pred CCCceEEcccChHH---HhcCCCCCceee---ccCch-hHHHhhhcCCceeccccccchhhhHHHHHH-Hhh-ceeEeec
Q 012212 331 SNRGKIVEWAPQEK---VLGHSSVACFIS---HCGWN-STMEGLSMGVPFLCWPYFSDQYQNRNYICE-AWK-IGLQFFA 401 (468)
Q Consensus 331 ~~nv~~~~~~p~~~---ll~~~~~~~~I~---hGG~~-s~~eal~~GvP~v~~P~~~DQ~~na~rv~~-~lG-~g~~l~~ 401 (468)
.++|.+.+++|+.+ ++..+++ +|+ +-|.| ++.||+++|+|+|+....+-- ...+.. .-| .|...
T Consensus 334 ~~~V~f~g~v~~~el~~ll~~a~~--~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~---~eIV~~~~~g~tG~l~-- 406 (463)
T PLN02949 334 DGDVEFHKNVSYRDLVRLLGGAVA--GLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPK---MDIVLDEDGQQTGFLA-- 406 (463)
T ss_pred CCcEEEeCCCCHHHHHHHHHhCcE--EEeCCccCCCChHHHHHHHcCCcEEEeCCCCCc---ceeeecCCCCcccccC--
Confidence 57889999998765 5656655 763 23443 799999999999998543210 000111 001 23222
Q ss_pred cCCCccCHHHHHHHHHHHhcC-hHH----HHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhhc
Q 012212 402 DENGIITRQEIQRKVLTLLKN-DDI----RSNSLKLKEVARKSLLGGGSSFRNFESFISDIKMLI 461 (468)
Q Consensus 402 ~~~~~~t~~~l~~ai~~~l~~-~~~----r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 461 (468)
-+.++++++|.+++++ ++. .+++++..++| |.....+++.+.+++..
T Consensus 407 -----~~~~~la~ai~~ll~~~~~~r~~m~~~ar~~~~~F--------S~e~~~~~~~~~i~~l~ 458 (463)
T PLN02949 407 -----TTVEEYADAILEVLRMRETERLEIAAAARKRANRF--------SEQRFNEDFKDAIRPIL 458 (463)
T ss_pred -----CCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHc--------CHHHHHHHHHHHHHHHH
Confidence 2689999999999984 443 33343333332 44455556655555443
|
|
| >cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Probab=98.82 E-value=2.2e-06 Score=82.68 Aligned_cols=88 Identities=16% Similarity=0.137 Sum_probs=60.4
Q ss_pred CCCceEEcccCh-HHHhcCCCCCceeecc----CchhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeeccCCC
Q 012212 331 SNRGKIVEWAPQ-EKVLGHSSVACFISHC----GWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENG 405 (468)
Q Consensus 331 ~~nv~~~~~~p~-~~ll~~~~~~~~I~hG----G~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~~~~ 405 (468)
.+|+.+.++..+ ..++..+++ +|.-. ..+++.||+++|+|+|+. |...+...+++ .|..+..
T Consensus 244 ~~~v~~~g~~~~~~~~~~~ad~--~v~~s~~e~~~~~~~Ea~a~G~PvI~~----~~~~~~e~i~~---~g~~~~~---- 310 (360)
T cd04951 244 SNRVKLLGLRDDIAAYYNAADL--FVLSSAWEGFGLVVAEAMACELPVVAT----DAGGVREVVGD---SGLIVPI---- 310 (360)
T ss_pred CCcEEEecccccHHHHHHhhce--EEecccccCCChHHHHHHHcCCCEEEe----cCCChhhEecC---CceEeCC----
Confidence 467888887654 567866666 65532 257899999999999975 55556665555 3334443
Q ss_pred ccCHHHHHHHHHHHh-cChHHHHHHHHH
Q 012212 406 IITRQEIQRKVLTLL-KNDDIRSNSLKL 432 (468)
Q Consensus 406 ~~t~~~l~~ai~~~l-~~~~~r~~a~~l 432 (468)
-+.+++.++|.+++ .++++++....-
T Consensus 311 -~~~~~~~~~i~~ll~~~~~~~~~~~~~ 337 (360)
T cd04951 311 -SDPEALANKIDEILKMSGEERDIIGAR 337 (360)
T ss_pred -CCHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 46889999999999 455565544443
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have |
| >COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.82 E-value=5.7e-06 Score=77.74 Aligned_cols=321 Identities=15% Similarity=0.128 Sum_probs=184.5
Q ss_pred EEEEcCCCccChHHHHHHHHHHHHC--CCEEEEEE-CCcchHHHHHhhhhhccCCCCCeEEEEcCCCCCCCcCCCCCHHH
Q 012212 7 VLVIPYPAQGHVAPLMKLATKIAER--AIKVTVVN-TQFIHKKIIASLQEKAEDSSSQIKLVTIPDGLELQAADREDPLK 83 (468)
Q Consensus 7 Il~~~~~~~GH~~p~~~LA~~L~~r--GH~Vt~~~-~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 83 (468)
.+.+-..+.|-++-..+|.++|.++ ++.|++-| ++...+.+.+... ..+...-+|-+ ...
T Consensus 51 ~vWiHaaSVGEv~a~~pLv~~l~~~~P~~~ilvTt~T~Tg~e~a~~~~~-------~~v~h~YlP~D----------~~~ 113 (419)
T COG1519 51 LVWIHAASVGEVLAALPLVRALRERFPDLRILVTTMTPTGAERAAALFG-------DSVIHQYLPLD----------LPI 113 (419)
T ss_pred eEEEEecchhHHHHHHHHHHHHHHhCCCCCEEEEecCccHHHHHHHHcC-------CCeEEEecCcC----------chH
Confidence 4445556789999999999999999 89999888 6666777666421 22333333321 111
Q ss_pred HHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCC--cccHHHHHHHhCCceEEEcccchHHHHHHhhhhhHhhcCCC
Q 012212 84 LGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVT--VGSALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGII 161 (468)
Q Consensus 84 ~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~--~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~ 161 (468)
. ++..++. .+||++|.--. ++....-++..|+|.+.+. +.+
T Consensus 114 ~-----------v~rFl~~-------~~P~l~Ii~EtElWPnli~e~~~~~~p~~LvN-------------------aRL 156 (419)
T COG1519 114 A-----------VRRFLRK-------WRPKLLIIMETELWPNLINELKRRGIPLVLVN-------------------ARL 156 (419)
T ss_pred H-----------HHHHHHh-------cCCCEEEEEeccccHHHHHHHHHcCCCEEEEe-------------------eee
Confidence 1 2233334 56888766544 3356667788999999875 222
Q ss_pred CCCCcccccCCcccccCCCccCcccccCcCCCCCChhHHHHHHHHHHHHHh-hccccEEEEcCcccCChhhhccC-CCce
Q 012212 162 DPNGFAILNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQA-VKISNWIINNSVYELDSPACDLI-PNIL 239 (468)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~le~~~~~~~-p~v~ 239 (468)
+..++. .+..+....+. +..-++++..+.-+-+-. ..+. +++.
T Consensus 157 S~rS~~----------------------------------~y~k~~~~~~~~~~~i~li~aQse~D~~Rf-~~LGa~~v~ 201 (419)
T COG1519 157 SDRSFA----------------------------------RYAKLKFLARLLFKNIDLILAQSEEDAQRF-RSLGAKPVV 201 (419)
T ss_pred chhhhH----------------------------------HHHHHHHHHHHHHHhcceeeecCHHHHHHH-HhcCCcceE
Confidence 211110 01111111111 234466666665433322 2222 3467
Q ss_pred eeccccCCCCCCCCCCCCCCCCCchhhhhhcccC-ccEEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCc
Q 012212 240 PIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAI-RSVVYVAFGSVAVLSQQQFAELALGLESLQKPFLWVIRQDFMNGS 318 (468)
Q Consensus 240 ~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~vv~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~l~~~~~~~~~~~ 318 (468)
..|.+=.+.... ...+.+...|-..-+. ++ +.+..+|. ...++.+..+..++.+.....+.++-+. +
T Consensus 202 v~GNlKfd~~~~------~~~~~~~~~~r~~l~~~r~-v~iaaSTH-~GEeei~l~~~~~l~~~~~~~llIlVPR----H 269 (419)
T COG1519 202 VTGNLKFDIEPP------PQLAAELAALRRQLGGHRP-VWVAASTH-EGEEEIILDAHQALKKQFPNLLLILVPR----H 269 (419)
T ss_pred EecceeecCCCC------hhhHHHHHHHHHhcCCCCc-eEEEecCC-CchHHHHHHHHHHHHhhCCCceEEEecC----C
Confidence 777655543322 0122222222221122 43 44544553 3466777777777766543333333222 1
Q ss_pred ccCCchhHHHHh------------------CCCceEEcccCh-HHHhcCCCC----CceeeccCchhHHHhhhcCCceec
Q 012212 319 RAKFPDGFIERV------------------SNRGKIVEWAPQ-EKVLGHSSV----ACFISHCGWNSTMEGLSMGVPFLC 375 (468)
Q Consensus 319 ~~~~~~~~~~~~------------------~~nv~~~~~~p~-~~ll~~~~~----~~~I~hGG~~s~~eal~~GvP~v~ 375 (468)
.+..+ .+.+-. ..+|.+.|-+-- ..+++-+++ +-++-+||.| ..|.+++|+|+|.
T Consensus 270 pERf~-~v~~l~~~~gl~~~~rS~~~~~~~~tdV~l~DtmGEL~l~y~~adiAFVGGSlv~~GGHN-~LEpa~~~~pvi~ 347 (419)
T COG1519 270 PERFK-AVENLLKRKGLSVTRRSQGDPPFSDTDVLLGDTMGELGLLYGIADIAFVGGSLVPIGGHN-PLEPAAFGTPVIF 347 (419)
T ss_pred hhhHH-HHHHHHHHcCCeEEeecCCCCCCCCCcEEEEecHhHHHHHHhhccEEEECCcccCCCCCC-hhhHHHcCCCEEe
Confidence 22221 111111 124555554432 333333443 2356799999 8899999999999
Q ss_pred cccccchhhhHHHHHHHhhceeEeeccCCCccCHHHHHHHHHHHhcChHHHHHHHHHHHHHHH
Q 012212 376 WPYFSDQYQNRNYICEAWKIGLQFFADENGIITRQEIQRKVLTLLKNDDIRSNSLKLKEVARK 438 (468)
Q Consensus 376 ~P~~~DQ~~na~rv~~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~~~~r~~a~~l~~~~~~ 438 (468)
=|+..-|.+-++++.++ |.|+.++ +.+.+.+++..+++|++.|++..+-+..+-.
T Consensus 348 Gp~~~Nf~ei~~~l~~~-ga~~~v~-------~~~~l~~~v~~l~~~~~~r~~~~~~~~~~v~ 402 (419)
T COG1519 348 GPYTFNFSDIAERLLQA-GAGLQVE-------DADLLAKAVELLLADEDKREAYGRAGLEFLA 402 (419)
T ss_pred CCccccHHHHHHHHHhc-CCeEEEC-------CHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 99999999999999997 9999984 3788999999999988877776666666555
|
|
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.79 E-value=1.5e-05 Score=76.66 Aligned_cols=82 Identities=16% Similarity=0.238 Sum_probs=57.2
Q ss_pred CCCceEEcccCh-HHHhcCCCCCceeeccC----chhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeeccCCC
Q 012212 331 SNRGKIVEWAPQ-EKVLGHSSVACFISHCG----WNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENG 405 (468)
Q Consensus 331 ~~nv~~~~~~p~-~~ll~~~~~~~~I~hGG----~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~~~~ 405 (468)
.+++.+.+...+ ..++..+++ +|..+. .+++.||+++|+|+|+. |...+...+.+ .|..++.
T Consensus 250 ~~~v~~~g~~~~~~~~~~~adi--~v~ps~~e~~~~~~~Ea~a~g~PvI~~----~~~~~~e~~~~---~g~~~~~---- 316 (365)
T cd03807 250 EDKVILLGERSDVPALLNALDV--FVLSSLSEGFPNVLLEAMACGLPVVAT----DVGDNAELVGD---TGFLVPP---- 316 (365)
T ss_pred CceEEEccccccHHHHHHhCCE--EEeCCccccCCcHHHHHHhcCCCEEEc----CCCChHHHhhc---CCEEeCC----
Confidence 456666665443 567866665 776543 47999999999999986 44445555444 4555554
Q ss_pred ccCHHHHHHHHHHHhcChHHH
Q 012212 406 IITRQEIQRKVLTLLKNDDIR 426 (468)
Q Consensus 406 ~~t~~~l~~ai~~~l~~~~~r 426 (468)
-+.+++.++|.++++|++.+
T Consensus 317 -~~~~~l~~~i~~l~~~~~~~ 336 (365)
T cd03807 317 -GDPEALAEAIEALLADPALR 336 (365)
T ss_pred -CCHHHHHHHHHHHHhChHHH
Confidence 36899999999999987643
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. |
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Probab=98.75 E-value=1.4e-05 Score=78.11 Aligned_cols=141 Identities=11% Similarity=0.176 Sum_probs=81.2
Q ss_pred EEEEEecccccCCHHHHHHHHHHHHhC--CCCEEEEEcCCCCCCcccCCchhHHHH---h---CCCceEE-cccChHH--
Q 012212 276 VVYVAFGSVAVLSQQQFAELALGLESL--QKPFLWVIRQDFMNGSRAKFPDGFIER---V---SNRGKIV-EWAPQEK-- 344 (468)
Q Consensus 276 vv~vs~Gs~~~~~~~~~~~~~~a~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~---~---~~nv~~~-~~~p~~~-- 344 (468)
.+++..|+.. ..+-+..+++++..+ +.+++++.++. ....+.+.+.+. . .+++... +++|+.+
T Consensus 202 ~~i~~~Grl~--~~Kg~~~li~a~~~l~~~~~l~i~g~g~----~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 275 (388)
T TIGR02149 202 PYILFVGRIT--RQKGVPHLLDAVHYIPKDVQVVLCAGAP----DTPEVAEEVRQAVALLDRNRTGIIWINKMLPKEELV 275 (388)
T ss_pred eEEEEEcccc--cccCHHHHHHHHHHHhhcCcEEEEeCCC----CcHHHHHHHHHHHHHhccccCceEEecCCCCHHHHH
Confidence 4555567753 223345566666554 34555444433 111111222211 1 1345554 6787654
Q ss_pred -HhcCCCCCceeec----cCchhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeeccC-CCccCHHHHHHHHHH
Q 012212 345 -VLGHSSVACFISH----CGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADE-NGIITRQEIQRKVLT 418 (468)
Q Consensus 345 -ll~~~~~~~~I~h----GG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~~-~~~~t~~~l~~ai~~ 418 (468)
++..+++ +|.= |...++.||+++|+|+|+.. .......++.. +.|..++... +..-..+++.++|.+
T Consensus 276 ~~~~~aDv--~v~ps~~e~~g~~~lEA~a~G~PvI~s~----~~~~~e~i~~~-~~G~~~~~~~~~~~~~~~~l~~~i~~ 348 (388)
T TIGR02149 276 ELLSNAEV--FVCPSIYEPLGIVNLEAMACGTPVVASA----TGGIPEVVVDG-ETGFLVPPDNSDADGFQAELAKAINI 348 (388)
T ss_pred HHHHhCCE--EEeCCccCCCChHHHHHHHcCCCEEEeC----CCCHHHHhhCC-CceEEcCCCCCcccchHHHHHHHHHH
Confidence 5656655 7752 33457899999999999874 34566666664 6788887643 000112899999999
Q ss_pred HhcChHHHHHH
Q 012212 419 LLKNDDIRSNS 429 (468)
Q Consensus 419 ~l~~~~~r~~a 429 (468)
+++|++.+++.
T Consensus 349 l~~~~~~~~~~ 359 (388)
T TIGR02149 349 LLADPELAKKM 359 (388)
T ss_pred HHhCHHHHHHH
Confidence 99988755443
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor. |
| >TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing | Back alignment and domain information |
|---|
Probab=98.74 E-value=1.4e-06 Score=83.92 Aligned_cols=134 Identities=17% Similarity=0.196 Sum_probs=82.0
Q ss_pred ccEEEEEeccc---ccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCcccCCchhHHHHh--CCCceEEcccCh---HHH
Q 012212 274 RSVVYVAFGSV---AVLSQQQFAELALGLESLQKPFLWVIRQDFMNGSRAKFPDGFIERV--SNRGKIVEWAPQ---EKV 345 (468)
Q Consensus 274 ~~vv~vs~Gs~---~~~~~~~~~~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~nv~~~~~~p~---~~l 345 (468)
++.|++++=.. .....+.+..+++++.+.+.+++++...... ....+...+.+.. .+|+++.+-+++ ..+
T Consensus 201 ~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~~~~~~vi~P~~~p--~~~~i~~~i~~~~~~~~~v~l~~~l~~~~~l~L 278 (365)
T TIGR03568 201 KPYALVTFHPVTLEKESAEEQIKELLKALDELNKNYIFTYPNADA--GSRIINEAIEEYVNEHPNFRLFKSLGQERYLSL 278 (365)
T ss_pred CCEEEEEeCCCcccccCchHHHHHHHHHHHHhccCCEEEEeCCCC--CchHHHHHHHHHhcCCCCEEEECCCChHHHHHH
Confidence 35888888543 2345678999999998877666665533200 0000111122211 467888876655 457
Q ss_pred hcCCCCCceeeccCchhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeE-eeccCCCccCHHHHHHHHHHHhcChH
Q 012212 346 LGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQ-FFADENGIITRQEIQRKVLTLLKNDD 424 (468)
Q Consensus 346 l~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~-l~~~~~~~~t~~~l~~ai~~~l~~~~ 424 (468)
+.++++ +|+.++.+- .||.+.|||+|.+- +.+ .- .+. |..+. +. .++++|.+++.+++ +++
T Consensus 279 l~~a~~--vitdSSggi-~EA~~lg~Pvv~l~---~R~---e~-~~~-g~nvl~vg------~~~~~I~~a~~~~~-~~~ 340 (365)
T TIGR03568 279 LKNADA--VIGNSSSGI-IEAPSFGVPTINIG---TRQ---KG-RLR-ADSVIDVD------PDKEEIVKAIEKLL-DPA 340 (365)
T ss_pred HHhCCE--EEEcChhHH-HhhhhcCCCEEeec---CCc---hh-hhh-cCeEEEeC------CCHHHHHHHHHHHh-ChH
Confidence 777766 998875555 99999999999874 211 11 122 43332 32 57899999999955 444
Q ss_pred HHH
Q 012212 425 IRS 427 (468)
Q Consensus 425 ~r~ 427 (468)
+++
T Consensus 341 ~~~ 343 (365)
T TIGR03568 341 FKK 343 (365)
T ss_pred HHH
Confidence 433
|
This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate. |
| >TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=98.73 E-value=1.3e-05 Score=78.70 Aligned_cols=87 Identities=17% Similarity=0.184 Sum_probs=61.5
Q ss_pred CCCceEEcccCh-HHHhcCCCCCcee--ec--cCc-hhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeeccCC
Q 012212 331 SNRGKIVEWAPQ-EKVLGHSSVACFI--SH--CGW-NSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADEN 404 (468)
Q Consensus 331 ~~nv~~~~~~p~-~~ll~~~~~~~~I--~h--GG~-~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~~~ 404 (468)
.++|++.+++++ ..++..+++ +| ++ .|. +.+.||+++|+|+|+.+...+.. .... |.|+.+.
T Consensus 279 ~~~V~~~G~v~~~~~~~~~adv--~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~~i-----~~~~-~~g~lv~---- 346 (397)
T TIGR03087 279 LPGVTVTGSVADVRPYLAHAAV--AVAPLRIARGIQNKVLEAMAMAKPVVASPEAAEGI-----DALP-GAELLVA---- 346 (397)
T ss_pred CCCeEEeeecCCHHHHHHhCCE--EEecccccCCcccHHHHHHHcCCCEEecCcccccc-----cccC-CcceEeC----
Confidence 467888899986 457766666 66 32 454 47999999999999987543321 1233 6677664
Q ss_pred CccCHHHHHHHHHHHhcChHHHHHHHH
Q 012212 405 GIITRQEIQRKVLTLLKNDDIRSNSLK 431 (468)
Q Consensus 405 ~~~t~~~l~~ai~~~l~~~~~r~~a~~ 431 (468)
-+.++++++|.++++|++.+++..+
T Consensus 347 --~~~~~la~ai~~ll~~~~~~~~~~~ 371 (397)
T TIGR03087 347 --ADPADFAAAILALLANPAEREELGQ 371 (397)
T ss_pred --CCHHHHHHHHHHHHcCHHHHHHHHH
Confidence 2689999999999999875554333
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.71 E-value=4.5e-06 Score=80.51 Aligned_cols=92 Identities=12% Similarity=0.181 Sum_probs=63.4
Q ss_pred hCCCceEEcccChHH---HhcCCCCCceeec----cCchhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeecc
Q 012212 330 VSNRGKIVEWAPQEK---VLGHSSVACFISH----CGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFAD 402 (468)
Q Consensus 330 ~~~nv~~~~~~p~~~---ll~~~~~~~~I~h----GG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~ 402 (468)
..+++++.+++|+.+ ++..+++ +|.- |..+++.||+++|+|+|+.... .....+.+ .|..++.
T Consensus 251 ~~~~v~~~g~~~~~~~~~~~~~~d~--~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~----~~~e~~~~---~~~~~~~- 320 (365)
T cd03809 251 LGDRVRFLGYVSDEELAALYRGARA--FVFPSLYEGFGLPVLEAMACGTPVIASNIS----SLPEVAGD---AALYFDP- 320 (365)
T ss_pred CCCeEEECCCCChhHHHHHHhhhhh--hcccchhccCCCCHHHHhcCCCcEEecCCC----CccceecC---ceeeeCC-
Confidence 367888889998864 5655655 5532 3356899999999999986542 22222322 3445544
Q ss_pred CCCccCHHHHHHHHHHHhcChHHHHHHHHHHHH
Q 012212 403 ENGIITRQEIQRKVLTLLKNDDIRSNSLKLKEV 435 (468)
Q Consensus 403 ~~~~~t~~~l~~ai~~~l~~~~~r~~a~~l~~~ 435 (468)
-+.+++.++|.++++|++.+++..+-+..
T Consensus 321 ----~~~~~~~~~i~~l~~~~~~~~~~~~~~~~ 349 (365)
T cd03809 321 ----LDPEALAAAIERLLEDPALREELRERGLA 349 (365)
T ss_pred ----CCHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 46899999999999999977766655543
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. |
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=98.70 E-value=4.1e-05 Score=79.11 Aligned_cols=93 Identities=17% Similarity=0.174 Sum_probs=64.3
Q ss_pred CCCceEEcccCh-HHHhcCCCCCceee---ccCc-hhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeeccCCC
Q 012212 331 SNRGKIVEWAPQ-EKVLGHSSVACFIS---HCGW-NSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENG 405 (468)
Q Consensus 331 ~~nv~~~~~~p~-~~ll~~~~~~~~I~---hGG~-~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~~~~ 405 (468)
.++|++.+|.++ ..++..+++ +|. +.|. +++.||+++|+|+|+... ......+++. ..|+.++...
T Consensus 573 ~~~V~flG~~~dv~~ll~aaDv--~VlpS~~Egfp~vlLEAMA~G~PVVat~~----gG~~EiV~dg-~~GlLv~~~d-- 643 (694)
T PRK15179 573 GERILFTGLSRRVGYWLTQFNA--FLLLSRFEGLPNVLIEAQFSGVPVVTTLA----GGAGEAVQEG-VTGLTLPADT-- 643 (694)
T ss_pred CCcEEEcCCcchHHHHHHhcCE--EEeccccccchHHHHHHHHcCCeEEEECC----CChHHHccCC-CCEEEeCCCC--
Confidence 577888899876 557766655 765 5564 799999999999999753 3455666663 4688887654
Q ss_pred ccCHHHHHHHHHHHh----cChHHHHHHHHHH
Q 012212 406 IITRQEIQRKVLTLL----KNDDIRSNSLKLK 433 (468)
Q Consensus 406 ~~t~~~l~~ai~~~l----~~~~~r~~a~~l~ 433 (468)
.+.+++.+++.+++ +++.+++++++..
T Consensus 644 -~~~~~La~aL~~ll~~l~~~~~l~~~ar~~a 674 (694)
T PRK15179 644 -VTAPDVAEALARIHDMCAADPGIARKAADWA 674 (694)
T ss_pred -CChHHHHHHHHHHHhChhccHHHHHHHHHHH
Confidence 55666666665555 4666777665544
|
|
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=98.68 E-value=0.00015 Score=70.49 Aligned_cols=85 Identities=11% Similarity=0.090 Sum_probs=60.7
Q ss_pred CCCceEEcccCh-HHHhcCCCCCceee--c--cCchhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeeccCCC
Q 012212 331 SNRGKIVEWAPQ-EKVLGHSSVACFIS--H--CGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENG 405 (468)
Q Consensus 331 ~~nv~~~~~~p~-~~ll~~~~~~~~I~--h--GG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~~~~ 405 (468)
.+++++.++..+ ..++..+++ +|. + |-..++.||+++|+|+|+... ..+...+++. ..|..++.
T Consensus 254 ~~~v~~~g~~~~~~~~~~~adi--~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~----~g~~e~i~~~-~~g~~~~~---- 322 (374)
T TIGR03088 254 AHLVWLPGERDDVPALMQALDL--FVLPSLAEGISNTILEAMASGLPVIATAV----GGNPELVQHG-VTGALVPP---- 322 (374)
T ss_pred cceEEEcCCcCCHHHHHHhcCE--EEeccccccCchHHHHHHHcCCCEEEcCC----CCcHHHhcCC-CceEEeCC----
Confidence 345666665543 567866666 763 2 445799999999999999754 4456666663 56877765
Q ss_pred ccCHHHHHHHHHHHhcChHHHH
Q 012212 406 IITRQEIQRKVLTLLKNDDIRS 427 (468)
Q Consensus 406 ~~t~~~l~~ai~~~l~~~~~r~ 427 (468)
-+.++++++|.++++|++.++
T Consensus 323 -~d~~~la~~i~~l~~~~~~~~ 343 (374)
T TIGR03088 323 -GDAVALARALQPYVSDPAARR 343 (374)
T ss_pred -CCHHHHHHHHHHHHhCHHHHH
Confidence 368999999999999887544
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.68 E-value=2.7e-05 Score=76.81 Aligned_cols=81 Identities=16% Similarity=0.143 Sum_probs=54.8
Q ss_pred CCCceEEcccChHH---HhcCCCCCceeec---cCc-hhHHHhhhcCCceeccccccchhhhHHHHH---HHhhceeEee
Q 012212 331 SNRGKIVEWAPQEK---VLGHSSVACFISH---CGW-NSTMEGLSMGVPFLCWPYFSDQYQNRNYIC---EAWKIGLQFF 400 (468)
Q Consensus 331 ~~nv~~~~~~p~~~---ll~~~~~~~~I~h---GG~-~s~~eal~~GvP~v~~P~~~DQ~~na~rv~---~~lG~g~~l~ 400 (468)
.++|++.+++|+.+ +|..+++ +|+- -|. -++.||+++|+|+|+.-..+. ....++ .. +.|...
T Consensus 304 ~~~V~f~g~v~~~~l~~~l~~adv--~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp---~~~iv~~~~~g-~~G~l~- 376 (419)
T cd03806 304 EDKVEFVVNAPFEELLEELSTASI--GLHTMWNEHFGIGVVEYMAAGLIPLAHASGGP---LLDIVVPWDGG-PTGFLA- 376 (419)
T ss_pred CCeEEEecCCCHHHHHHHHHhCeE--EEECCccCCcccHHHHHHHcCCcEEEEcCCCC---chheeeccCCC-CceEEe-
Confidence 57899999998765 6666655 6642 232 488999999999998643221 112222 22 466653
Q ss_pred ccCCCccCHHHHHHHHHHHhcChH
Q 012212 401 ADENGIITRQEIQRKVLTLLKNDD 424 (468)
Q Consensus 401 ~~~~~~~t~~~l~~ai~~~l~~~~ 424 (468)
-+.++++++|.+++++++
T Consensus 377 ------~d~~~la~ai~~ll~~~~ 394 (419)
T cd03806 377 ------STAEEYAEAIEKILSLSE 394 (419)
T ss_pred ------CCHHHHHHHHHHHHhCCH
Confidence 268999999999998654
|
ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. |
| >PLN02846 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=98.65 E-value=3.9e-05 Score=75.23 Aligned_cols=71 Identities=17% Similarity=0.234 Sum_probs=49.5
Q ss_pred cccChHHHhcCCCCCceeecc----CchhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeeccCCCccCHHHHH
Q 012212 338 EWAPQEKVLGHSSVACFISHC----GWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGIITRQEIQ 413 (468)
Q Consensus 338 ~~~p~~~ll~~~~~~~~I~hG----G~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~~~~~~t~~~l~ 413 (468)
++....+++...++ ||.-+ =..++.||+++|+|+|+.- ...+ ..+... +-|... -+.+++.
T Consensus 290 G~~~~~~~~~~~Dv--Fv~pS~~Et~g~v~lEAmA~G~PVVa~~----~~~~-~~v~~~-~ng~~~-------~~~~~~a 354 (462)
T PLN02846 290 GRDHADPLFHDYKV--FLNPSTTDVVCTTTAEALAMGKIVVCAN----HPSN-EFFKQF-PNCRTY-------DDGKGFV 354 (462)
T ss_pred CCCCHHHHHHhCCE--EEECCCcccchHHHHHHHHcCCcEEEec----CCCc-ceeecC-CceEec-------CCHHHHH
Confidence 66666778866655 88774 3478999999999999984 3322 333332 445444 2578999
Q ss_pred HHHHHHhcCh
Q 012212 414 RKVLTLLKND 423 (468)
Q Consensus 414 ~ai~~~l~~~ 423 (468)
+++.++|.++
T Consensus 355 ~ai~~~l~~~ 364 (462)
T PLN02846 355 RATLKALAEE 364 (462)
T ss_pred HHHHHHHccC
Confidence 9999999854
|
|
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Probab=98.63 E-value=6.5e-05 Score=73.04 Aligned_cols=111 Identities=16% Similarity=0.152 Sum_probs=67.9
Q ss_pred CCCceEEccc--ChH---HHhcCCCCCceeecc---C-chhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeec
Q 012212 331 SNRGKIVEWA--PQE---KVLGHSSVACFISHC---G-WNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFA 401 (468)
Q Consensus 331 ~~nv~~~~~~--p~~---~ll~~~~~~~~I~hG---G-~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~ 401 (468)
.+++.+.++. ++. .+++.+++ |+.-. | ..++.||+++|+|+|+... ......+... ..|+..+
T Consensus 251 ~~~v~~~~~~~~~~~~~~~~~~~ad~--~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~----~~~~~~i~~~-~~g~~~~- 322 (372)
T cd03792 251 DPDIHVLTLPPVSDLEVNALQRASTV--VLQKSIREGFGLTVTEALWKGKPVIAGPV----GGIPLQIEDG-ETGFLVD- 322 (372)
T ss_pred CCCeEEEecCCCCHHHHHHHHHhCeE--EEeCCCccCCCHHHHHHHHcCCCEEEcCC----CCchhhcccC-CceEEeC-
Confidence 4577787776 443 35655554 87543 2 3599999999999998753 3334445553 5576543
Q ss_pred cCCCccCHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHH
Q 012212 402 DENGIITRQEIQRKVLTLLKNDDIRSNSLKLKEVARKSLLGGGSSFRNFESFISDIK 458 (468)
Q Consensus 402 ~~~~~~t~~~l~~ai~~~l~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 458 (468)
+.+.+..+|.++++|++.+++..+-+.+... +.=+-...++++++.++
T Consensus 323 ------~~~~~a~~i~~ll~~~~~~~~~~~~a~~~~~---~~~s~~~~~~~~~~~~~ 370 (372)
T cd03792 323 ------TVEEAAVRILYLLRDPELRRKMGANAREHVR---ENFLITRHLKDYLYLIS 370 (372)
T ss_pred ------CcHHHHHHHHHHHcCHHHHHHHHHHHHHHHH---HHcCHHHHHHHHHHHHH
Confidence 3567788999999998866554443333211 12244555566655544
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. |
| >PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.59 E-value=1.7e-05 Score=75.40 Aligned_cols=207 Identities=15% Similarity=0.138 Sum_probs=113.4
Q ss_pred ccEEEEcCcccCChhhhccCCCceeec-cccCCCCCCCCCCCCCCCCCchhhhhhcccCccEEEEEecccccCCHHHHHH
Q 012212 216 SNWIINNSVYELDSPACDLIPNILPIG-PLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAE 294 (468)
Q Consensus 216 ~~~~l~~~~~~le~~~~~~~p~v~~vG-pl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~ 294 (468)
.|.+++--.++-++. ....-++.||| |+...-... ..+....+.+ -.+++++|.+--||....=...+..
T Consensus 134 ~D~ll~ifPFE~~~y-~~~g~~~~~VGHPl~d~~~~~-------~~~~~~~~~~-l~~~~~iIaLLPGSR~~EI~rllP~ 204 (373)
T PF02684_consen 134 VDHLLVIFPFEPEFY-KKHGVPVTYVGHPLLDEVKPE-------PDRAEAREKL-LDPDKPIIALLPGSRKSEIKRLLPI 204 (373)
T ss_pred HhheeECCcccHHHH-hccCCCeEEECCcchhhhccC-------CCHHHHHHhc-CCCCCcEEEEeCCCCHHHHHHHHHH
Confidence 355555555444444 45556899999 555443222 1122222333 2345679999999974433334444
Q ss_pred HHHHHH---hC--CCCEEEEEcCCCCCCcccCCchhHH---HHhCCCceEE-cccChHHHhcCCCCCceeeccCchhHHH
Q 012212 295 LALGLE---SL--QKPFLWVIRQDFMNGSRAKFPDGFI---ERVSNRGKIV-EWAPQEKVLGHSSVACFISHCGWNSTME 365 (468)
Q Consensus 295 ~~~a~~---~~--~~~~l~~~~~~~~~~~~~~~~~~~~---~~~~~nv~~~-~~~p~~~ll~~~~~~~~I~hGG~~s~~e 365 (468)
++++.+ +. +.++++..... ...+-+. .....++.+. ..-.-.+++..+++ .+.-.|-- +.|
T Consensus 205 ~l~aa~~l~~~~p~l~fvvp~a~~-------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~m~~ad~--al~~SGTa-TLE 274 (373)
T PF02684_consen 205 FLEAAKLLKKQRPDLQFVVPVAPE-------VHEELIEEILAEYPPDVSIVIIEGESYDAMAAADA--ALAASGTA-TLE 274 (373)
T ss_pred HHHHHHHHHHhCCCeEEEEecCCH-------HHHHHHHHHHHhhCCCCeEEEcCCchHHHHHhCcc--hhhcCCHH-HHH
Confidence 555543 22 23444433322 1111111 1123333433 22233556765655 66666653 789
Q ss_pred hhhcCCceeccc-cccchhhhHHHHHHHhhceeEee-------------ccCCCccCHHHHHHHHHHHhcChHHHHHHHH
Q 012212 366 GLSMGVPFLCWP-YFSDQYQNRNYICEAWKIGLQFF-------------ADENGIITRQEIQRKVLTLLKNDDIRSNSLK 431 (468)
Q Consensus 366 al~~GvP~v~~P-~~~DQ~~na~rv~~~lG~g~~l~-------------~~~~~~~t~~~l~~ai~~~l~~~~~r~~a~~ 431 (468)
+..+|+|||++= ...=-...|+++.+ ... +.+. -++ .|++.|.+++.++|+|++.++..+.
T Consensus 275 ~Al~g~P~Vv~Yk~~~lt~~iak~lvk-~~~-isL~Niia~~~v~PEliQ~~---~~~~~i~~~~~~ll~~~~~~~~~~~ 349 (373)
T PF02684_consen 275 AALLGVPMVVAYKVSPLTYFIAKRLVK-VKY-ISLPNIIAGREVVPELIQED---ATPENIAAELLELLENPEKRKKQKE 349 (373)
T ss_pred HHHhCCCEEEEEcCcHHHHHHHHHhhc-CCE-eechhhhcCCCcchhhhccc---CCHHHHHHHHHHHhcCHHHHHHHHH
Confidence 999999998763 22223334444433 121 1111 133 8999999999999999988888777
Q ss_pred HHHHHHHHhcCCCch
Q 012212 432 LKEVARKSLLGGGSS 446 (468)
Q Consensus 432 l~~~~~~~~~~~g~~ 446 (468)
..+.+++....+.++
T Consensus 350 ~~~~~~~~~~~~~~~ 364 (373)
T PF02684_consen 350 LFREIRQLLGPGASS 364 (373)
T ss_pred HHHHHHHhhhhccCC
Confidence 777777765555554
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process |
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.53 E-value=1e-05 Score=77.93 Aligned_cols=136 Identities=13% Similarity=0.147 Sum_probs=89.9
Q ss_pred EEEecccccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCcccCCchhHHHHhCCCceEEcccChHH---HhcCCCCCce
Q 012212 278 YVAFGSVAVLSQQQFAELALGLESLQKPFLWVIRQDFMNGSRAKFPDGFIERVSNRGKIVEWAPQEK---VLGHSSVACF 354 (468)
Q Consensus 278 ~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~---ll~~~~~~~~ 354 (468)
++..|+.. ...-+..+++++..++.+++++-.+. ..+.+.+...+||.+.+++|+.+ ++..+++ +
T Consensus 198 il~~G~~~--~~K~~~~li~a~~~~~~~l~ivG~g~--------~~~~l~~~~~~~V~~~g~~~~~~~~~~~~~ad~--~ 265 (351)
T cd03804 198 YLSVGRLV--PYKRIDLAIEAFNKLGKRLVVIGDGP--------ELDRLRAKAGPNVTFLGRVSDEELRDLYARARA--F 265 (351)
T ss_pred EEEEEcCc--cccChHHHHHHHHHCCCcEEEEECCh--------hHHHHHhhcCCCEEEecCCCHHHHHHHHHhCCE--E
Confidence 44456653 33446677888887776665554432 12333334578999999999854 6766665 6
Q ss_pred ee--ccCc-hhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeeccCCCccCHHHHHHHHHHHhcCh-HHHHHHH
Q 012212 355 IS--HCGW-NSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGIITRQEIQRKVLTLLKND-DIRSNSL 430 (468)
Q Consensus 355 I~--hGG~-~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~~-~~r~~a~ 430 (468)
|. .-|. .++.||+++|+|+|+.... .....+++. +.|+.++. -+.++++++|.++++|+ ..+++++
T Consensus 266 v~ps~e~~g~~~~Eama~G~Pvi~~~~~----~~~e~i~~~-~~G~~~~~-----~~~~~la~~i~~l~~~~~~~~~~~~ 335 (351)
T cd03804 266 LFPAEEDFGIVPVEAMASGTPVIAYGKG----GALETVIDG-VTGILFEE-----QTVESLAAAVERFEKNEDFDPQAIR 335 (351)
T ss_pred EECCcCCCCchHHHHHHcCCCEEEeCCC----CCcceeeCC-CCEEEeCC-----CCHHHHHHHHHHHHhCcccCHHHHH
Confidence 63 3344 4678999999999998543 344445553 67888876 35888999999999988 4555554
Q ss_pred HHHHH
Q 012212 431 KLKEV 435 (468)
Q Consensus 431 ~l~~~ 435 (468)
+.+++
T Consensus 336 ~~~~~ 340 (351)
T cd03804 336 AHAER 340 (351)
T ss_pred HHHHh
Confidence 44433
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. |
| >PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 | Back alignment and domain information |
|---|
Probab=98.49 E-value=7.3e-07 Score=84.93 Aligned_cols=139 Identities=14% Similarity=0.157 Sum_probs=79.2
Q ss_pred cCccEEEEEecccccCC-H---HHHHHHHHHHHhC-CCCEEEEEcCCCCCCcccCCchhHHHHhC--CCceEEcccCh--
Q 012212 272 AIRSVVYVAFGSVAVLS-Q---QQFAELALGLESL-QKPFLWVIRQDFMNGSRAKFPDGFIERVS--NRGKIVEWAPQ-- 342 (468)
Q Consensus 272 ~~~~vv~vs~Gs~~~~~-~---~~~~~~~~a~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~nv~~~~~~p~-- 342 (468)
.+++.+++++=...... + ..+..+++++.+. +..++|.+.+. ......+.+... +|++++.-+++
T Consensus 178 ~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~~~~~vi~~~hn~------p~~~~~i~~~l~~~~~v~~~~~l~~~~ 251 (346)
T PF02350_consen 178 APKPYILVTLHPVTNEDNPERLEQILEALKALAERQNVPVIFPLHNN------PRGSDIIIEKLKKYDNVRLIEPLGYEE 251 (346)
T ss_dssp TTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHHTTEEEEEE--S-------HHHHHHHHHHHTT-TTEEEE----HHH
T ss_pred cCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhcCCCcEEEEecCC------chHHHHHHHHhcccCCEEEECCCCHHH
Confidence 45668999985543333 3 4555666666665 56677777633 011122222221 58999866655
Q ss_pred -HHHhcCCCCCceeeccCchhHHHhhhcCCceeccccccchhhhHHHHHHH-hhceeEeeccCCCccCHHHHHHHHHHHh
Q 012212 343 -EKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEA-WKIGLQFFADENGIITRQEIQRKVLTLL 420 (468)
Q Consensus 343 -~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~-lG~g~~l~~~~~~~~t~~~l~~ai~~~l 420 (468)
..++.++++ +|+..| |-.-||.+.|+|+|.+ +++..|-+-. .|..+.++ .+.++|.++|++++
T Consensus 252 ~l~ll~~a~~--vvgdSs-GI~eEa~~lg~P~v~i------R~~geRqe~r~~~~nvlv~------~~~~~I~~ai~~~l 316 (346)
T PF02350_consen 252 YLSLLKNADL--VVGDSS-GIQEEAPSLGKPVVNI------RDSGERQEGRERGSNVLVG------TDPEAIIQAIEKAL 316 (346)
T ss_dssp HHHHHHHESE--EEESSH-HHHHHGGGGT--EEEC------SSS-S-HHHHHTTSEEEET------SSHHHHHHHHHHHH
T ss_pred HHHHHhcceE--EEEcCc-cHHHHHHHhCCeEEEe------cCCCCCHHHHhhcceEEeC------CCHHHHHHHHHHHH
Confidence 557877776 999999 4444999999999999 4444443321 15554432 68999999999999
Q ss_pred cChHHHHHHHH
Q 012212 421 KNDDIRSNSLK 431 (468)
Q Consensus 421 ~~~~~r~~a~~ 431 (468)
++.+..++...
T Consensus 317 ~~~~~~~~~~~ 327 (346)
T PF02350_consen 317 SDKDFYRKLKN 327 (346)
T ss_dssp H-HHHHHHHHC
T ss_pred hChHHHHhhcc
Confidence 87555554433
|
1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C. |
| >KOG3349 consensus Predicted glycosyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.48 E-value=8.3e-07 Score=70.14 Aligned_cols=118 Identities=19% Similarity=0.183 Sum_probs=75.3
Q ss_pred cEEEEEecccccC---CHHHHHHHHHHHHhCCC-CEEEEEcCCCCCCcccCCchhHHHHh-CCCceE--EcccCh-HHHh
Q 012212 275 SVVYVAFGSVAVL---SQQQFAELALGLESLQK-PFLWVIRQDFMNGSRAKFPDGFIERV-SNRGKI--VEWAPQ-EKVL 346 (468)
Q Consensus 275 ~vv~vs~Gs~~~~---~~~~~~~~~~a~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~-~~nv~~--~~~~p~-~~ll 346 (468)
..+|||-||.... ..-.-.+..+.+.+.|. +.++..+.+ + ...++...... .+...+ .+|-|- .+.+
T Consensus 4 ~~vFVTVGtT~Fd~LI~~Vl~~~~~~~L~k~G~~kLiiQ~Grg----~-~~~~d~~~~~~k~~gl~id~y~f~psl~e~I 78 (170)
T KOG3349|consen 4 MTVFVTVGTTSFDDLISCVLSEEFLQELQKRGFTKLIIQIGRG----Q-PFFGDPIDLIRKNGGLTIDGYDFSPSLTEDI 78 (170)
T ss_pred eEEEEEeccccHHHHHHHHcCHHHHHHHHHcCccEEEEEecCC----c-cCCCCHHHhhcccCCeEEEEEecCccHHHHH
Confidence 3799999997310 01112235556677776 566667665 1 11222221111 222333 377776 6667
Q ss_pred cCCCCCceeeccCchhHHHhhhcCCceecccc----ccchhhhHHHHHHHhhceeEee
Q 012212 347 GHSSVACFISHCGWNSTMEGLSMGVPFLCWPY----FSDQYQNRNYICEAWKIGLQFF 400 (468)
Q Consensus 347 ~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~----~~DQ~~na~rv~~~lG~g~~l~ 400 (468)
+.+++ ||+|+|.||++|.|..|+|.|+++- ---|-.-|..+++. |-=..-.
T Consensus 79 ~~Adl--VIsHAGaGS~letL~l~KPlivVvNd~LMDNHQ~ELA~qL~~e-gyL~~C~ 133 (170)
T KOG3349|consen 79 RSADL--VISHAGAGSCLETLRLGKPLIVVVNDSLMDNHQLELAKQLAEE-GYLYYCT 133 (170)
T ss_pred hhccE--EEecCCcchHHHHHHcCCCEEEEeChHhhhhHHHHHHHHHHhc-CcEEEee
Confidence 55655 9999999999999999999999984 46788889888883 6654443
|
|
| >COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.46 E-value=7.6e-06 Score=76.27 Aligned_cols=140 Identities=13% Similarity=0.186 Sum_probs=89.9
Q ss_pred cEEEEEecccccCCHHHHHHHHHHHHhC---CCCEEEEEcCCCCCCcccCCchhHHHHh--CCCceEE---cccChHHHh
Q 012212 275 SVVYVAFGSVAVLSQQQFAELALGLESL---QKPFLWVIRQDFMNGSRAKFPDGFIERV--SNRGKIV---EWAPQEKVL 346 (468)
Q Consensus 275 ~vv~vs~Gs~~~~~~~~~~~~~~a~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~nv~~~---~~~p~~~ll 346 (468)
..|++|+=...... +.++.+++++.++ ...+.+++.... ...+.+-...+. .+|+++. +|.++..++
T Consensus 205 ~~iLvT~HRreN~~-~~~~~i~~al~~i~~~~~~~~viyp~H~----~~~v~e~~~~~L~~~~~v~li~pl~~~~f~~L~ 279 (383)
T COG0381 205 KYILVTAHRRENVG-EPLEEICEALREIAEEYPDVIVIYPVHP----RPRVRELVLKRLKNVERVKLIDPLGYLDFHNLM 279 (383)
T ss_pred cEEEEEcchhhccc-ccHHHHHHHHHHHHHhCCCceEEEeCCC----ChhhhHHHHHHhCCCCcEEEeCCcchHHHHHHH
Confidence 48888865544433 5566666655332 223344444330 001111111233 3458876 667788899
Q ss_pred cCCCCCceeeccCchhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeeccCCCccCHHHHHHHHHHHhcChHHH
Q 012212 347 GHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGIITRQEIQRKVLTLLKNDDIR 426 (468)
Q Consensus 347 ~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~~~~r 426 (468)
.++.+ ++|-.|.. --||-..|+|++++=...|++. +++ + |.-+.+. .+.+.|.+++.+++++++..
T Consensus 280 ~~a~~--iltDSGgi-qEEAp~lg~Pvl~lR~~TERPE---~v~-a-gt~~lvg------~~~~~i~~~~~~ll~~~~~~ 345 (383)
T COG0381 280 KNAFL--ILTDSGGI-QEEAPSLGKPVLVLRDTTERPE---GVE-A-GTNILVG------TDEENILDAATELLEDEEFY 345 (383)
T ss_pred HhceE--EEecCCch-hhhHHhcCCcEEeeccCCCCcc---cee-c-CceEEeC------ccHHHHHHHHHHHhhChHHH
Confidence 88866 88887753 6789999999999988888887 333 3 6655554 56799999999999999877
Q ss_pred HHHHHHH
Q 012212 427 SNSLKLK 433 (468)
Q Consensus 427 ~~a~~l~ 433 (468)
++.....
T Consensus 346 ~~m~~~~ 352 (383)
T COG0381 346 ERMSNAK 352 (383)
T ss_pred HHHhccc
Confidence 7554443
|
|
| >cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=98.44 E-value=0.0002 Score=69.61 Aligned_cols=79 Identities=16% Similarity=0.086 Sum_probs=52.2
Q ss_pred CCCceEEcccChHH---HhcCCCCCcee------eccCc-hhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEee
Q 012212 331 SNRGKIVEWAPQEK---VLGHSSVACFI------SHCGW-NSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFF 400 (468)
Q Consensus 331 ~~nv~~~~~~p~~~---ll~~~~~~~~I------~hGG~-~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~ 400 (468)
.+||++.+++|+.+ .+.+.++.++- +.++. +.+.|++++|+|+|+.++ ...++. +-|..+.
T Consensus 253 ~~nV~~~G~~~~~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~-------~~~~~~--~~~~~~~ 323 (373)
T cd04950 253 LPNVHYLGPKPYKELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPL-------PEVRRY--EDEVVLI 323 (373)
T ss_pred CCCEEEeCCCCHHHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCCCEEecCc-------HHHHhh--cCcEEEe
Confidence 47999999999766 56666662221 22343 469999999999998753 222333 3233333
Q ss_pred ccCCCccCHHHHHHHHHHHhcCh
Q 012212 401 ADENGIITRQEIQRKVLTLLKND 423 (468)
Q Consensus 401 ~~~~~~~t~~~l~~ai~~~l~~~ 423 (468)
. -+.+++.++|.+++.++
T Consensus 324 ~-----~d~~~~~~ai~~~l~~~ 341 (373)
T cd04950 324 A-----DDPEEFVAAIEKALLED 341 (373)
T ss_pred C-----CCHHHHHHHHHHHHhcC
Confidence 2 36999999999977544
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >PLN00142 sucrose synthase | Back alignment and domain information |
|---|
Probab=98.44 E-value=0.0003 Score=73.14 Aligned_cols=92 Identities=10% Similarity=0.124 Sum_probs=58.1
Q ss_pred CCCceEEcc----cChHHHhcC-C-CCCceeec---cCc-hhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEee
Q 012212 331 SNRGKIVEW----APQEKVLGH-S-SVACFISH---CGW-NSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFF 400 (468)
Q Consensus 331 ~~nv~~~~~----~p~~~ll~~-~-~~~~~I~h---GG~-~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~ 400 (468)
.++|++.+. .+..++... . ..++||.- -|. .++.||+++|+|+|+.. .......|+.. .-|..++
T Consensus 641 ~~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~GlPVVATd----vGG~~EIV~dG-~tG~LV~ 715 (815)
T PLN00142 641 KGQFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC----QGGPAEIIVDG-VSGFHID 715 (815)
T ss_pred CCcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcCCCEEEcC----CCCHHHHhcCC-CcEEEeC
Confidence 466666543 333444431 1 12446653 454 48999999999999874 44566666663 4688887
Q ss_pred ccCCCccCHHHHHHHHHH----HhcChHHHHHHHHH
Q 012212 401 ADENGIITRQEIQRKVLT----LLKNDDIRSNSLKL 432 (468)
Q Consensus 401 ~~~~~~~t~~~l~~ai~~----~l~~~~~r~~a~~l 432 (468)
. -+.++++++|.+ +++|++.+++..+-
T Consensus 716 P-----~D~eaLA~aI~~lLekLl~Dp~lr~~mg~~ 746 (815)
T PLN00142 716 P-----YHGDEAANKIADFFEKCKEDPSYWNKISDA 746 (815)
T ss_pred C-----CCHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 6 357788888765 45788866654443
|
|
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=98.41 E-value=0.00019 Score=71.88 Aligned_cols=117 Identities=12% Similarity=0.093 Sum_probs=64.6
Q ss_pred hCCCceEE-cccCh--HHHhcCCCCCceeec---cCc-hhHHHhhhcCCceecccccc--chhhhHHHHHHHhhceeEee
Q 012212 330 VSNRGKIV-EWAPQ--EKVLGHSSVACFISH---CGW-NSTMEGLSMGVPFLCWPYFS--DQYQNRNYICEAWKIGLQFF 400 (468)
Q Consensus 330 ~~~nv~~~-~~~p~--~~ll~~~~~~~~I~h---GG~-~s~~eal~~GvP~v~~P~~~--DQ~~na~rv~~~lG~g~~l~ 400 (468)
.+.++.+. +|-.. ..+++.+++ +|.- -|. .+.+||+++|+|.|+....+ |.-.+...-.+. +.|+.++
T Consensus 335 ~~~~v~~~~g~~~~~~~~~~~~aDv--~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~-~~G~lv~ 411 (466)
T PRK00654 335 YPGKVGVQIGYDEALAHRIYAGADM--FLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGE-ATGFVFD 411 (466)
T ss_pred CCCcEEEEEeCCHHHHHHHHhhCCE--EEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCC-CceEEeC
Confidence 35566554 66322 246655555 7753 344 48899999999999874421 211111000122 5788887
Q ss_pred ccCCCccCHHHHHHHHHHHhc---ChHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhh
Q 012212 401 ADENGIITRQEIQRKVLTLLK---NDDIRSNSLKLKEVARKSLLGGGSSFRNFESFISDIKML 460 (468)
Q Consensus 401 ~~~~~~~t~~~l~~ai~~~l~---~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 460 (468)
. -+++++.++|.++++ |++.+ +++++.... ..=+-.+.+++.++..++.
T Consensus 412 ~-----~d~~~la~~i~~~l~~~~~~~~~---~~~~~~~~~---~~fsw~~~a~~~~~lY~~~ 463 (466)
T PRK00654 412 D-----FNAEDLLRALRRALELYRQPPLW---RALQRQAMA---QDFSWDKSAEEYLELYRRL 463 (466)
T ss_pred C-----CCHHHHHHHHHHHHHHhcCHHHH---HHHHHHHhc---cCCChHHHHHHHHHHHHHH
Confidence 6 468999999999886 43322 233332221 1223455556655555443
|
|
| >COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.40 E-value=0.00014 Score=67.91 Aligned_cols=348 Identities=15% Similarity=0.105 Sum_probs=171.2
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCCCCCCCcCCCCCHHH
Q 012212 4 QPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDGLELQAADREDPLK 83 (468)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 83 (468)
|+||.++..-..|++.- ..|.++|.++=-+|.|+.-.. +..++-|. ..+ ++..+.....+.+
T Consensus 1 ~~ki~i~AGE~SGDllG-a~LikaLk~~~~~~efvGvgG--~~m~aeG~------------~sl---~~~~elsvmGf~E 62 (381)
T COG0763 1 MLKIALSAGEASGDLLG-AGLIKALKARYPDVEFVGVGG--EKMEAEGL------------ESL---FDMEELSVMGFVE 62 (381)
T ss_pred CceEEEEecccchhhHH-HHHHHHHHhhCCCeEEEEecc--HHHHhccC------------ccc---cCHHHHHHhhHHH
Confidence 46888888777788775 367778876633777777654 33443221 100 1111102223344
Q ss_pred HHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEE-ecCCcccHHHHHH---HhC--CceEEEcccchHHHHHHhhhhhHhh
Q 012212 84 LGESVARAMRGCLRDLIEKINQSNDCEPIRCVI-ADVTVGSALEVAE---SMG--IARAAVVPFGPGSLALSLQFPKLLE 157 (468)
Q Consensus 84 ~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi-~D~~~~~~~~~A~---~lg--iP~v~~~~~~~~~~~~~~~~p~~~~ 157 (468)
.+..+.+... ..+++++.+.. .+||++| +|.-.+ ...+|+ ..| +|.|.+.....
T Consensus 63 VL~~lp~llk-~~~~~~~~i~~----~kpD~~i~IDsPdF-nl~vak~lrk~~p~i~iihYV~PsV-------------- 122 (381)
T COG0763 63 VLGRLPRLLK-IRRELVRYILA----NKPDVLILIDSPDF-NLRVAKKLRKAGPKIKIIHYVSPSV-------------- 122 (381)
T ss_pred HHHHHHHHHH-HHHHHHHHHHh----cCCCEEEEeCCCCC-chHHHHHHHHhCCCCCeEEEECcce--------------
Confidence 4444333222 35566666555 5698865 565444 444554 446 99887653111
Q ss_pred cCCCCCCCcccccCCcccccCCCccCcccccCcCCCCCChhHHHHHHHHHHHHHhhccccEEEEcCcccCChhhhccCCC
Q 012212 158 AGIIDPNGFAILNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACDLIPN 237 (468)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~~~~~p~ 237 (468)
|.|...+. ... ....|.++.--.++-++. ....-.
T Consensus 123 --------------------------------WAWr~~Ra--~~i----------~~~~D~lLailPFE~~~y-~k~g~~ 157 (381)
T COG0763 123 --------------------------------WAWRPKRA--VKI----------AKYVDHLLAILPFEPAFY-DKFGLP 157 (381)
T ss_pred --------------------------------eeechhhH--HHH----------HHHhhHeeeecCCCHHHH-HhcCCC
Confidence 11111110 011 113345554444333333 233334
Q ss_pred ceeec-cccCCCCCCCCCCCCCCCCCchhhhhhcccCccEEEEEecccccCCHHHHHHHHHHHHhC-----CCCEEEEEc
Q 012212 238 ILPIG-PLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALGLESL-----QKPFLWVIR 311 (468)
Q Consensus 238 v~~vG-pl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~a~~~~-----~~~~l~~~~ 311 (468)
+.||| |+....+.. ...+.+.+-+....+++++.+-.||....-...+..+.++.+.+ +.++++-+.
T Consensus 158 ~~yVGHpl~d~i~~~-------~~r~~ar~~l~~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~~vlp~~ 230 (381)
T COG0763 158 CTYVGHPLADEIPLL-------PDREAAREKLGIDADEKTLALLPGSRRSEIRRLLPPFVQAAQELKARYPDLKFVLPLV 230 (381)
T ss_pred eEEeCChhhhhcccc-------ccHHHHHHHhCCCCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCceEEEecC
Confidence 89999 444433221 12333444454555667999999997543333444444444332 345555544
Q ss_pred CCCCCCcccCCchhHHHHh-CCCc-eEEcccC-h--HHHhcCCCCCceeeccCchhHHHhhhcCCceecccc-ccchhhh
Q 012212 312 QDFMNGSRAKFPDGFIERV-SNRG-KIVEWAP-Q--EKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPY-FSDQYQN 385 (468)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~-~~nv-~~~~~~p-~--~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~-~~DQ~~n 385 (468)
.. .-+.+.+.. ..+. ...-++. + .+.+..++ +.+.-+|-. +.|+..+|+|||+.=- ..=-..-
T Consensus 231 ~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~aD--~al~aSGT~-tLE~aL~g~P~Vv~Yk~~~it~~i 299 (381)
T COG0763 231 NA--------KYRRIIEEALKWEVAGLSLILIDGEKRKAFAAAD--AALAASGTA-TLEAALAGTPMVVAYKVKPITYFI 299 (381)
T ss_pred cH--------HHHHHHHHHhhccccCceEEecCchHHHHHHHhh--HHHHhccHH-HHHHHHhCCCEEEEEeccHHHHHH
Confidence 33 111122111 1121 1222222 1 22453344 477777765 6899999999987621 1111222
Q ss_pred HHHHHHHhhc--------eeEe-eccCCCccCHHHHHHHHHHHhcChH----HHHHHHHHHHHHHHHhcCCCchHHHHHH
Q 012212 386 RNYICEAWKI--------GLQF-FADENGIITRQEIQRKVLTLLKNDD----IRSNSLKLKEVARKSLLGGGSSFRNFES 452 (468)
Q Consensus 386 a~rv~~~lG~--------g~~l-~~~~~~~~t~~~l~~ai~~~l~~~~----~r~~a~~l~~~~~~~~~~~g~~~~~~~~ 452 (468)
|.+..+ +.. |..+ +.-=...++++.|.+++..++.|+. +++....|.+.++. ++++..+.+-
T Consensus 300 ak~lvk-~~yisLpNIi~~~~ivPEliq~~~~pe~la~~l~~ll~~~~~~~~~~~~~~~l~~~l~~----~~~~e~aA~~ 374 (381)
T COG0763 300 AKRLVK-LPYVSLPNILAGREIVPELIQEDCTPENLARALEELLLNGDRREALKEKFRELHQYLRE----DPASEIAAQA 374 (381)
T ss_pred HHHhcc-CCcccchHHhcCCccchHHHhhhcCHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHcC----CcHHHHHHHH
Confidence 232221 110 1000 0000123889999999999999983 44455555554443 5555666665
Q ss_pred HHHHH
Q 012212 453 FISDI 457 (468)
Q Consensus 453 ~~~~~ 457 (468)
+++.+
T Consensus 375 vl~~~ 379 (381)
T COG0763 375 VLELL 379 (381)
T ss_pred HHHHh
Confidence 55544
|
|
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type | Back alignment and domain information |
|---|
Probab=98.28 E-value=0.00056 Score=68.77 Aligned_cols=87 Identities=5% Similarity=0.037 Sum_probs=56.1
Q ss_pred hCCCceEEcccChH---HHhcCCCCCceeec---cCc-hhHHHhhhcCCceeccccccchhhhHHHHHH------Hhhce
Q 012212 330 VSNRGKIVEWAPQE---KVLGHSSVACFISH---CGW-NSTMEGLSMGVPFLCWPYFSDQYQNRNYICE------AWKIG 396 (468)
Q Consensus 330 ~~~nv~~~~~~p~~---~ll~~~~~~~~I~h---GG~-~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~------~lG~g 396 (468)
.+.++.+....+.. .+++.+++ +|.- -|. .+.+||+++|+|+|+....+ ....+.. . +.|
T Consensus 344 ~~~~v~~~~~~~~~~~~~~~~~aDv--~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg----~~e~v~~~~~~~~~-~~G 416 (473)
T TIGR02095 344 YPGNVRVIIGYDEALAHLIYAGADF--ILMPSRFEPCGLTQLYAMRYGTVPIVRRTGG----LADTVVDGDPEAES-GTG 416 (473)
T ss_pred CCCcEEEEEcCCHHHHHHHHHhCCE--EEeCCCcCCcHHHHHHHHHCCCCeEEccCCC----ccceEecCCCCCCC-Cce
Confidence 35677776555553 36655555 7743 244 47899999999999875422 2222222 1 578
Q ss_pred eEeeccCCCccCHHHHHHHHHHHhc----ChHHHHH
Q 012212 397 LQFFADENGIITRQEIQRKVLTLLK----NDDIRSN 428 (468)
Q Consensus 397 ~~l~~~~~~~~t~~~l~~ai~~~l~----~~~~r~~ 428 (468)
+.++. -+++++.++|.+++. |++.+++
T Consensus 417 ~l~~~-----~d~~~la~~i~~~l~~~~~~~~~~~~ 447 (473)
T TIGR02095 417 FLFEE-----YDPGALLAALSRALRLYRQDPSLWEA 447 (473)
T ss_pred EEeCC-----CCHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 77765 468999999999987 6654443
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. |
| >PRK10017 colanic acid biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=98.17 E-value=0.0089 Score=58.55 Aligned_cols=175 Identities=17% Similarity=0.200 Sum_probs=100.5
Q ss_pred hhhhcccCccEEEEEecccccC------C-H---HHHHHHHHHHHhCCCCEEEEEcCCCCCCcccC----CchhHHHHh-
Q 012212 266 SWLDEQAIRSVVYVAFGSVAVL------S-Q---QQFAELALGLESLQKPFLWVIRQDFMNGSRAK----FPDGFIERV- 330 (468)
Q Consensus 266 ~~l~~~~~~~vv~vs~Gs~~~~------~-~---~~~~~~~~a~~~~~~~~l~~~~~~~~~~~~~~----~~~~~~~~~- 330 (468)
.|+.....+++|.|+....... . . +.+..+++.+.+.++++++..-.. +.+.... .-..+.+..
T Consensus 226 ~~~~~~~~~~~Vgisvr~~~~~~~~~~~~~~~Y~~~la~~i~~Li~~g~~Vv~lp~~~-~~~~~~~dD~~~~~~l~~~~~ 304 (426)
T PRK10017 226 HWLDVAAQQKTVAITLRELAPFDKRLGTTQQAYEKAFAGVVNRIIDEGYQVIALSTCT-GIDSYNKDDRMVALNLRQHVS 304 (426)
T ss_pred hhhcccccCCEEEEEecccccccccccccHHHHHHHHHHHHHHHHHCCCeEEEEeccc-CccCCCCchHHHHHHHHHhcc
Confidence 4444333455788876543211 1 2 334455555555688877664321 0000000 012222333
Q ss_pred -CCCceEE--cccChH--HHhcCCCCCceeeccCchhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeE-eeccCC
Q 012212 331 -SNRGKIV--EWAPQE--KVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQ-FFADEN 404 (468)
Q Consensus 331 -~~nv~~~--~~~p~~--~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~-l~~~~~ 404 (468)
+.++++. ++-|.+ .+++++++ +|..==+ ++.-|+.+|||.+.+++ | +-...-++. +|..-. ++.++
T Consensus 305 ~~~~~~vi~~~~~~~e~~~iIs~~dl--~ig~RlH-a~I~a~~~gvP~i~i~Y--~-~K~~~~~~~-lg~~~~~~~~~~- 376 (426)
T PRK10017 305 DPARYHVVMDELNDLEMGKILGACEL--TVGTRLH-SAIISMNFGTPAIAINY--E-HKSAGIMQQ-LGLPEMAIDIRH- 376 (426)
T ss_pred cccceeEecCCCChHHHHHHHhhCCE--EEEecch-HHHHHHHcCCCEEEeee--h-HHHHHHHHH-cCCccEEechhh-
Confidence 2344543 333443 67866654 8865333 45668999999999988 3 333444466 687755 66666
Q ss_pred CccCHHHHHHHHHHHhcChH-HHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHH
Q 012212 405 GIITRQEIQRKVLTLLKNDD-IRSNSLKLKEVARKSLLGGGSSFRNFESFISDI 457 (468)
Q Consensus 405 ~~~t~~~l~~ai~~~l~~~~-~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 457 (468)
++.++|.+.+.++++|.+ ++++.++.-++++. .+..-+.+++..+
T Consensus 377 --l~~~~Li~~v~~~~~~r~~~~~~l~~~v~~~r~------~~~~~~~~~~~~~ 422 (426)
T PRK10017 377 --LLDGSLQAMVADTLGQLPALNARLAEAVSRERQ------TGMQMVQSVLERI 422 (426)
T ss_pred --CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHh
Confidence 899999999999999866 77777766666666 3334445555544
|
|
| >TIGR02918 accessory Sec system glycosylation protein GtfA | Back alignment and domain information |
|---|
Probab=98.16 E-value=0.00053 Score=68.88 Aligned_cols=100 Identities=17% Similarity=0.233 Sum_probs=64.8
Q ss_pred CCCceEEcccChHHHhcCCCCCceee---ccC-chhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeecc--CC
Q 012212 331 SNRGKIVEWAPQEKVLGHSSVACFIS---HCG-WNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFAD--EN 404 (468)
Q Consensus 331 ~~nv~~~~~~p~~~ll~~~~~~~~I~---hGG-~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~--~~ 404 (468)
.++|.+.++.+...++..+++ +|. .-| ..++.||+++|+|+|+.... ..+...++.. .-|..++.. .+
T Consensus 375 ~~~V~f~G~~~~~~~~~~adv--~v~pS~~Egfgl~~lEAma~G~PVI~~dv~---~G~~eiI~~g-~nG~lv~~~~~~~ 448 (500)
T TIGR02918 375 QDYIHLKGHRNLSEVYKDYEL--YLSASTSEGFGLTLMEAVGSGLGMIGFDVN---YGNPTFIEDN-KNGYLIPIDEEED 448 (500)
T ss_pred CCeEEEcCCCCHHHHHHhCCE--EEEcCccccccHHHHHHHHhCCCEEEecCC---CCCHHHccCC-CCEEEEeCCcccc
Confidence 466788898888889977766 775 334 46899999999999997432 1345555553 468777631 10
Q ss_pred CccC-HHHHHHHHHHHhcChH---HHHHHHHHHHHH
Q 012212 405 GIIT-RQEIQRKVLTLLKNDD---IRSNSLKLKEVA 436 (468)
Q Consensus 405 ~~~t-~~~l~~ai~~~l~~~~---~r~~a~~l~~~~ 436 (468)
..-+ .++++++|.++++++. +.+++.+.++.+
T Consensus 449 d~~~~~~~la~~I~~ll~~~~~~~~~~~a~~~a~~f 484 (500)
T TIGR02918 449 DEDQIITALAEKIVEYFNSNDIDAFHEYSYQIAEGF 484 (500)
T ss_pred chhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHhc
Confidence 0012 7889999999996443 344444444443
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. |
| >PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A | Back alignment and domain information |
|---|
Probab=98.15 E-value=6.5e-05 Score=73.02 Aligned_cols=153 Identities=18% Similarity=0.199 Sum_probs=86.5
Q ss_pred CccEEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCcccCCchhHHHHh------CCCceEEcccChHHHh
Q 012212 273 IRSVVYVAFGSVAVLSQQQFAELALGLESLQKPFLWVIRQDFMNGSRAKFPDGFIERV------SNRGKIVEWAPQEKVL 346 (468)
Q Consensus 273 ~~~vv~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~------~~nv~~~~~~p~~~ll 346 (468)
++.++|.+|.+.....++.++...+-+...+.-.+|...... .-...+.+.. ++++.+.++.|+.+-|
T Consensus 283 ~d~vvF~~fn~~~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~------~~~~~l~~~~~~~Gv~~~Ri~f~~~~~~~ehl 356 (468)
T PF13844_consen 283 EDAVVFGSFNNLFKISPETLDLWARILKAVPNSRLWLLRFPA------SGEARLRRRFAAHGVDPDRIIFSPVAPREEHL 356 (468)
T ss_dssp SSSEEEEE-S-GGG--HHHHHHHHHHHHHSTTEEEEEEETST------THHHHHHHHHHHTTS-GGGEEEEE---HHHHH
T ss_pred CCceEEEecCccccCCHHHHHHHHHHHHhCCCcEEEEeeCCH------HHHHHHHHHHHHcCCChhhEEEcCCCCHHHHH
Confidence 345999999999999999999999999999998888876541 1112222221 5778888888875533
Q ss_pred c-CCCCCcee---eccCchhHHHhhhcCCceecccc-ccchhhhHHHHHHHhhceeEeeccCCCccCHHHHHHHHHHHhc
Q 012212 347 G-HSSVACFI---SHCGWNSTMEGLSMGVPFLCWPY-FSDQYQNRNYICEAWKIGLQFFADENGIITRQEIQRKVLTLLK 421 (468)
Q Consensus 347 ~-~~~~~~~I---~hGG~~s~~eal~~GvP~v~~P~-~~DQ~~na~rv~~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~ 421 (468)
. +..+|+++ ..+|.+|++|||++|||+|.+|- ..=.+..|..+.. +|+.-.+-. +.++-.+..-++-+
T Consensus 357 ~~~~~~DI~LDT~p~nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~-lGl~ElIA~------s~~eYv~~Av~La~ 429 (468)
T PF13844_consen 357 RRYQLADICLDTFPYNGGTTTLDALWMGVPVVTLPGETMASRVGASILRA-LGLPELIAD------SEEEYVEIAVRLAT 429 (468)
T ss_dssp HHGGG-SEEE--SSS--SHHHHHHHHHT--EEB---SSGGGSHHHHHHHH-HT-GGGB-S------SHHHHHHHHHHHHH
T ss_pred HHhhhCCEEeeCCCCCCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHH-cCCchhcCC------CHHHHHHHHHHHhC
Confidence 2 23334454 56788999999999999999983 3344455555666 588765543 34444444447777
Q ss_pred ChHHHHHHH-HHHHHHHH
Q 012212 422 NDDIRSNSL-KLKEVARK 438 (468)
Q Consensus 422 ~~~~r~~a~-~l~~~~~~ 438 (468)
|++++++.+ +|.+++.+
T Consensus 430 D~~~l~~lR~~Lr~~~~~ 447 (468)
T PF13844_consen 430 DPERLRALRAKLRDRRSK 447 (468)
T ss_dssp -HHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhh
Confidence 888655443 34444433
|
|
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.12 E-value=0.001 Score=67.08 Aligned_cols=98 Identities=12% Similarity=0.013 Sum_probs=56.4
Q ss_pred CCCceEEcccChH---HHhcCCCCCceeec---cCc-hhHHHhhhcCCceecccccc--chhhhHHHHHHHhhceeEeec
Q 012212 331 SNRGKIVEWAPQE---KVLGHSSVACFISH---CGW-NSTMEGLSMGVPFLCWPYFS--DQYQNRNYICEAWKIGLQFFA 401 (468)
Q Consensus 331 ~~nv~~~~~~p~~---~ll~~~~~~~~I~h---GG~-~s~~eal~~GvP~v~~P~~~--DQ~~na~rv~~~lG~g~~l~~ 401 (468)
++|+++....++. .+++.+++ ++.- -|. .+.+||+++|+|+|+....+ |.-.+.....+. |.|..++.
T Consensus 350 ~~~v~~~~~~~~~~~~~~~~~aDv--~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~-~~G~~~~~ 426 (476)
T cd03791 350 PGRVAVLIGYDEALAHLIYAGADF--FLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGE-GTGFVFEG 426 (476)
T ss_pred CCcEEEEEeCCHHHHHHHHHhCCE--EECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCC-CCeEEeCC
Confidence 5777766333443 35655554 7743 122 47899999999999875422 211111101122 47888876
Q ss_pred cCCCccCHHHHHHHHHHHhcChHHHHHHHHHHHHH
Q 012212 402 DENGIITRQEIQRKVLTLLKNDDIRSNSLKLKEVA 436 (468)
Q Consensus 402 ~~~~~~t~~~l~~ai~~~l~~~~~r~~a~~l~~~~ 436 (468)
.+.+++.++|.+++++..-++...+++++.
T Consensus 427 -----~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~ 456 (476)
T cd03791 427 -----YNADALLAALRRALALYRDPEAWRKLQRNA 456 (476)
T ss_pred -----CCHHHHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence 468999999999885322233333444433
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| >PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
Probab=98.03 E-value=0.00019 Score=70.55 Aligned_cols=86 Identities=15% Similarity=0.235 Sum_probs=63.0
Q ss_pred CCCceEEcccChHH---HhcCCCCCceeec---------cCc-hhHHHhhhcCCceeccccccchhhhHHHHHHHhhcee
Q 012212 331 SNRGKIVEWAPQEK---VLGHSSVACFISH---------CGW-NSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGL 397 (468)
Q Consensus 331 ~~nv~~~~~~p~~~---ll~~~~~~~~I~h---------GG~-~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~ 397 (468)
.++|.+.+|+|+.+ ++..+++ +|.- -|. .++.||+++|+|+|+... ......++.. ..|+
T Consensus 278 ~~~V~~~G~~~~~el~~~l~~aDv--~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~----~g~~E~v~~~-~~G~ 350 (406)
T PRK15427 278 EDVVEMPGFKPSHEVKAMLDDADV--FLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLH----SGIPELVEAD-KSGW 350 (406)
T ss_pred CCeEEEeCCCCHHHHHHHHHhCCE--EEECCccCCCCCccCccHHHHHHHhCCCCEEEeCC----CCchhhhcCC-CceE
Confidence 57788889999865 5655555 7752 244 678999999999998743 3344555553 5788
Q ss_pred EeeccCCCccCHHHHHHHHHHHhc-ChHHHHH
Q 012212 398 QFFADENGIITRQEIQRKVLTLLK-NDDIRSN 428 (468)
Q Consensus 398 ~l~~~~~~~~t~~~l~~ai~~~l~-~~~~r~~ 428 (468)
.++. -+.++++++|.++++ |++.+++
T Consensus 351 lv~~-----~d~~~la~ai~~l~~~d~~~~~~ 377 (406)
T PRK15427 351 LVPE-----NDAQALAQRLAAFSQLDTDELAP 377 (406)
T ss_pred EeCC-----CCHHHHHHHHHHHHhCCHHHHHH
Confidence 7765 469999999999999 8874443
|
|
| >PLN02501 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=98.02 E-value=0.0032 Score=63.88 Aligned_cols=79 Identities=20% Similarity=0.141 Sum_probs=52.1
Q ss_pred CceEEcccChH-HHhcCCCCCceeec---cC-chhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeeccCCCcc
Q 012212 333 RGKIVEWAPQE-KVLGHSSVACFISH---CG-WNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGII 407 (468)
Q Consensus 333 nv~~~~~~p~~-~ll~~~~~~~~I~h---GG-~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~~~~~~ 407 (468)
++.+.++.++. .+++..++ ||.- =| ..++.||+++|+|+|+....+.. . +.. |.+..+. -
T Consensus 602 ~V~FLG~~dd~~~lyasaDV--FVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~e----~-V~~--g~nGll~------~ 666 (794)
T PLN02501 602 NLNFLKGRDHADDSLHGYKV--FINPSISDVLCTATAEALAMGKFVVCADHPSNE----F-FRS--FPNCLTY------K 666 (794)
T ss_pred EEEecCCCCCHHHHHHhCCE--EEECCCcccchHHHHHHHHcCCCEEEecCCCCc----e-Eee--cCCeEec------C
Confidence 35555777654 47855555 8763 23 47899999999999998654322 1 222 3222222 2
Q ss_pred CHHHHHHHHHHHhcChHHH
Q 012212 408 TRQEIQRKVLTLLKNDDIR 426 (468)
Q Consensus 408 t~~~l~~ai~~~l~~~~~r 426 (468)
+.+++.++|.++|.|+..+
T Consensus 667 D~EafAeAI~~LLsd~~~r 685 (794)
T PLN02501 667 TSEDFVAKVKEALANEPQP 685 (794)
T ss_pred CHHHHHHHHHHHHhCchhh
Confidence 5899999999999988643
|
|
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.01 E-value=0.0089 Score=60.14 Aligned_cols=90 Identities=19% Similarity=0.226 Sum_probs=63.8
Q ss_pred CCCceEEcccChHHHhcCCCCCceeec----cCchhHHHhhhcCCceeccccccchhhhHHHHHHH----h-hceeEeec
Q 012212 331 SNRGKIVEWAPQEKVLGHSSVACFISH----CGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEA----W-KIGLQFFA 401 (468)
Q Consensus 331 ~~nv~~~~~~p~~~ll~~~~~~~~I~h----GG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~----l-G~g~~l~~ 401 (468)
.+||++.+.....+++...++ +|.- |-..++.||+++|+|+|+. |.......+.+. + ..|..++.
T Consensus 353 ~~~V~f~G~~~v~~~l~~aDv--~vlpS~~Eg~p~~vlEAma~G~PVVat----d~g~~~elv~~~~~~~~g~~G~lv~~ 426 (475)
T cd03813 353 EDNVKFTGFQNVKEYLPKLDV--LVLTSISEGQPLVILEAMAAGIPVVAT----DVGSCRELIEGADDEALGPAGEVVPP 426 (475)
T ss_pred CCeEEEcCCccHHHHHHhCCE--EEeCchhhcCChHHHHHHHcCCCEEEC----CCCChHHHhcCCcccccCCceEEECC
Confidence 578888886666778865555 6644 3347899999999999986 444444455441 1 26777765
Q ss_pred cCCCccCHHHHHHHHHHHhcChHHHHHHHH
Q 012212 402 DENGIITRQEIQRKVLTLLKNDDIRSNSLK 431 (468)
Q Consensus 402 ~~~~~~t~~~l~~ai~~~l~~~~~r~~a~~ 431 (468)
-+.++++++|.++++|++.+++..+
T Consensus 427 -----~d~~~la~ai~~ll~~~~~~~~~~~ 451 (475)
T cd03813 427 -----ADPEALARAILRLLKDPELRRAMGE 451 (475)
T ss_pred -----CCHHHHHHHHHHHhcCHHHHHHHHH
Confidence 4699999999999999886655443
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Probab=98.00 E-value=0.00054 Score=66.54 Aligned_cols=87 Identities=15% Similarity=0.178 Sum_probs=61.5
Q ss_pred CCCceEEcccCh-HHHhcCCCCCceeec--cCchhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeeccCCCcc
Q 012212 331 SNRGKIVEWAPQ-EKVLGHSSVACFISH--CGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGII 407 (468)
Q Consensus 331 ~~nv~~~~~~p~-~~ll~~~~~~~~I~h--GG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~~~~~~ 407 (468)
++++.+.++.++ ..++..+++-++.++ |...++.||+++|+|+|+..... .....++.. ..|..++. -
T Consensus 260 ~~~v~~~g~~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~---g~~~~v~~~-~~G~lv~~-----~ 330 (372)
T cd04949 260 EDYVFLKGYTRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNY---GPSEIIEDG-ENGYLVPK-----G 330 (372)
T ss_pred cceEEEcCCCCCHHHHHhhhhEEEecccccccChHHHHHHhCCCCEEEecCCC---CcHHHcccC-CCceEeCC-----C
Confidence 567777787766 557877766333343 33468999999999999874321 244555553 67888865 4
Q ss_pred CHHHHHHHHHHHhcChHHH
Q 012212 408 TRQEIQRKVLTLLKNDDIR 426 (468)
Q Consensus 408 t~~~l~~ai~~~l~~~~~r 426 (468)
+.++++++|.++++|++.+
T Consensus 331 d~~~la~~i~~ll~~~~~~ 349 (372)
T cd04949 331 DIEALAEAIIELLNDPKLL 349 (372)
T ss_pred cHHHHHHHHHHHHcCHHHH
Confidence 6999999999999998633
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra |
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.97 E-value=0.00027 Score=69.49 Aligned_cols=89 Identities=16% Similarity=0.202 Sum_probs=65.5
Q ss_pred CCCceEEcccChHH---HhcCCCCCceeeccC----chhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeeccC
Q 012212 331 SNRGKIVEWAPQEK---VLGHSSVACFISHCG----WNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADE 403 (468)
Q Consensus 331 ~~nv~~~~~~p~~~---ll~~~~~~~~I~hGG----~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~~ 403 (468)
.++|.+.+|+++.+ ++...+++++|...- ..+++||+++|+|+|+. |.......+.+. +.|..++..
T Consensus 288 ~~~V~f~G~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas----~vgg~~e~i~~~-~~G~l~~~~- 361 (407)
T cd04946 288 NISVNFTGELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIAT----NVGGTPEIVDNG-GNGLLLSKD- 361 (407)
T ss_pred CceEEEecCCChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeC----CCCCcHHHhcCC-CcEEEeCCC-
Confidence 35678889999865 444455566775443 46899999999999987 444566667663 488887653
Q ss_pred CCccCHHHHHHHHHHHhcChHHHHH
Q 012212 404 NGIITRQEIQRKVLTLLKNDDIRSN 428 (468)
Q Consensus 404 ~~~~t~~~l~~ai~~~l~~~~~r~~ 428 (468)
-+.++++++|.++++|++.+++
T Consensus 362 ---~~~~~la~~I~~ll~~~~~~~~ 383 (407)
T cd04946 362 ---PTPNELVSSLSKFIDNEEEYQT 383 (407)
T ss_pred ---CCHHHHHHHHHHHHhCHHHHHH
Confidence 4789999999999998875543
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. |
| >PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.96 E-value=0.0001 Score=62.90 Aligned_cols=92 Identities=20% Similarity=0.263 Sum_probs=69.3
Q ss_pred CCCceEEcccCh---HHHhcCCCCCceeec----cCchhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeeccC
Q 012212 331 SNRGKIVEWAPQ---EKVLGHSSVACFISH----CGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADE 403 (468)
Q Consensus 331 ~~nv~~~~~~p~---~~ll~~~~~~~~I~h----GG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~~ 403 (468)
.+++++.+++++ ..++..+++ +|+. |...++.||+++|+|+|+. +...+...+... +.|..++.
T Consensus 72 ~~~i~~~~~~~~~~l~~~~~~~di--~v~~s~~e~~~~~~~Ea~~~g~pvI~~----~~~~~~e~~~~~-~~g~~~~~-- 142 (172)
T PF00534_consen 72 KENIIFLGYVPDDELDELYKSSDI--FVSPSRNEGFGLSLLEAMACGCPVIAS----DIGGNNEIINDG-VNGFLFDP-- 142 (172)
T ss_dssp GTTEEEEESHSHHHHHHHHHHTSE--EEE-BSSBSS-HHHHHHHHTT-EEEEE----SSTHHHHHSGTT-TSEEEEST--
T ss_pred ccccccccccccccccccccccee--ccccccccccccccccccccccceeec----cccCCceeeccc-cceEEeCC--
Confidence 578899999983 457766655 8876 6678999999999999986 666677777774 66888876
Q ss_pred CCccCHHHHHHHHHHHhcChHHHHHHHHHHH
Q 012212 404 NGIITRQEIQRKVLTLLKNDDIRSNSLKLKE 434 (468)
Q Consensus 404 ~~~~t~~~l~~ai~~~l~~~~~r~~a~~l~~ 434 (468)
.+.+++.++|.++++|++++++..+-+.
T Consensus 143 ---~~~~~l~~~i~~~l~~~~~~~~l~~~~~ 170 (172)
T PF00534_consen 143 ---NDIEELADAIEKLLNDPELRQKLGKNAR 170 (172)
T ss_dssp ---TSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---CCHHHHHHHHHHHHCCHHHHHHHHHHhc
Confidence 5799999999999999976666555443
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B .... |
| >COG5017 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.91 E-value=0.00014 Score=56.68 Aligned_cols=108 Identities=16% Similarity=0.148 Sum_probs=68.5
Q ss_pred EEEEecccccCCHHHHHH--HHHHHHhCCCCEEEEEcCCCCCCcccCCchhHHHHhCCCceEEccc--Ch-HHHhcCCCC
Q 012212 277 VYVAFGSVAVLSQQQFAE--LALGLESLQKPFLWVIRQDFMNGSRAKFPDGFIERVSNRGKIVEWA--PQ-EKVLGHSSV 351 (468)
Q Consensus 277 v~vs~Gs~~~~~~~~~~~--~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~--p~-~~ll~~~~~ 351 (468)
+|||-||....=...+.. +.+-.+....++++.++.+ ...|- ...++.+|. +- +.+...++
T Consensus 2 ifVTvGstf~~f~rlv~k~e~~el~~~i~e~lIvQyGn~------d~kpv-------agl~v~~F~~~~kiQsli~dar- 67 (161)
T COG5017 2 IFVTVGSTFYPFNRLVLKIEVLELTELIQEELIVQYGNG------DIKPV-------AGLRVYGFDKEEKIQSLIHDAR- 67 (161)
T ss_pred eEEEecCccchHHHHHhhHHHHHHHHHhhhheeeeecCC------Ccccc-------cccEEEeechHHHHHHHhhcce-
Confidence 789999973311111111 2222223345788888876 22220 112566554 33 56775555
Q ss_pred CceeeccCchhHHHhhhcCCceecccccc--------chhhhHHHHHHHhhceeEee
Q 012212 352 ACFISHCGWNSTMEGLSMGVPFLCWPYFS--------DQYQNRNYICEAWKIGLQFF 400 (468)
Q Consensus 352 ~~~I~hGG~~s~~eal~~GvP~v~~P~~~--------DQ~~na~rv~~~lG~g~~l~ 400 (468)
++|+|+|.||+..++..++|.|++|-.. -|..-|..+.+ ++.=+...
T Consensus 68 -IVISHaG~GSIL~~~rl~kplIv~pr~s~y~elvDdHQvela~klae-~~~vv~~s 122 (161)
T COG5017 68 -IVISHAGEGSILLLLRLDKPLIVVPRSSQYQELVDDHQVELALKLAE-INYVVACS 122 (161)
T ss_pred -EEEeccCcchHHHHhhcCCcEEEEECchhHHHhhhhHHHHHHHHHHh-cCceEEEc
Confidence 5999999999999999999999999643 56777777777 46655554
|
|
| >COG1817 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=97.91 E-value=0.017 Score=52.39 Aligned_cols=107 Identities=14% Similarity=0.031 Sum_probs=69.1
Q ss_pred CCccChHHHHHHHHHHHHCCCEEEEEECCcc--hHHHHHhhhhhccCCCCCeEEEEcCCCCCCCcCCCCCHHHHHHHHHH
Q 012212 13 PAQGHVAPLMKLATKIAERAIKVTVVNTQFI--HKKIIASLQEKAEDSSSQIKLVTIPDGLELQAADREDPLKLGESVAR 90 (468)
Q Consensus 13 ~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~--~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (468)
.-.-|+.-+..|..+|.++||+|.+-+-... .+.+..+ ++.+..+... ....+.+-+..+..
T Consensus 8 ~n~~hvhfFk~lI~elekkG~ev~iT~rd~~~v~~LLd~y----------gf~~~~Igk~------g~~tl~~Kl~~~~e 71 (346)
T COG1817 8 GNPPHVHFFKNLIWELEKKGHEVLITCRDFGVVTELLDLY----------GFPYKSIGKH------GGVTLKEKLLESAE 71 (346)
T ss_pred CCcchhhHHHHHHHHHHhCCeEEEEEEeecCcHHHHHHHh----------CCCeEeeccc------CCccHHHHHHHHHH
Confidence 3446888999999999999999998886542 2344443 3444444422 11122222222222
Q ss_pred HhhHHHHHHHHHHhhCCCCCCceEEEecCCcccHHHHHHHhCCceEEEcccchH
Q 012212 91 AMRGCLRDLIEKINQSNDCEPIRCVIADVTVGSALEVAESMGIARAAVVPFGPG 144 (468)
Q Consensus 91 ~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~lgiP~v~~~~~~~~ 144 (468)
... .+.+++.. .+||+.+. -..+..+.+|..+|+|.+++....-.
T Consensus 72 R~~-~L~ki~~~-------~kpdv~i~-~~s~~l~rvafgLg~psIi~~D~ehA 116 (346)
T COG1817 72 RVY-KLSKIIAE-------FKPDVAIG-KHSPELPRVAFGLGIPSIIFVDNEHA 116 (346)
T ss_pred HHH-HHHHHHhh-------cCCceEee-cCCcchhhHHhhcCCceEEecCChhH
Confidence 222 24555555 78999999 67788999999999999998765443
|
|
| >PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.001 Score=64.82 Aligned_cols=86 Identities=15% Similarity=0.250 Sum_probs=61.8
Q ss_pred hCCCceEEcccChHH---HhcCCCCCceeec----cCc-hhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeec
Q 012212 330 VSNRGKIVEWAPQEK---VLGHSSVACFISH----CGW-NSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFA 401 (468)
Q Consensus 330 ~~~nv~~~~~~p~~~---ll~~~~~~~~I~h----GG~-~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~ 401 (468)
...++++.+++|+.+ +++.+++ +|.. .|. .++.||+++|+|+|+... ..+...+++. ..|..+..
T Consensus 255 l~~~v~~~G~~~~~~l~~~~~~aDv--~v~pS~~~E~f~~~~lEAma~G~PVI~s~~----gg~~Eiv~~~-~~G~~l~~ 327 (380)
T PRK15484 255 IGDRCIMLGGQPPEKMHNYYPLADL--VVVPSQVEEAFCMVAVEAMAAGKPVLASTK----GGITEFVLEG-ITGYHLAE 327 (380)
T ss_pred cCCcEEEeCCCCHHHHHHHHHhCCE--EEeCCCCccccccHHHHHHHcCCCEEEeCC----CCcHhhcccC-CceEEEeC
Confidence 356788889998655 5755655 7742 343 578899999999999854 3455556653 56775532
Q ss_pred cCCCccCHHHHHHHHHHHhcChHHH
Q 012212 402 DENGIITRQEIQRKVLTLLKNDDIR 426 (468)
Q Consensus 402 ~~~~~~t~~~l~~ai~~~l~~~~~r 426 (468)
. .+.++++++|.++++|++.+
T Consensus 328 ~----~d~~~la~~I~~ll~d~~~~ 348 (380)
T PRK15484 328 P----MTSDSIISDINRTLADPELT 348 (380)
T ss_pred C----CCHHHHHHHHHHHHcCHHHH
Confidence 2 47999999999999998753
|
|
| >PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.015 Score=58.12 Aligned_cols=65 Identities=23% Similarity=0.183 Sum_probs=47.3
Q ss_pred CCCceEEcccCh-HHHhcCCCCCceee---ccC-chhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeecc
Q 012212 331 SNRGKIVEWAPQ-EKVLGHSSVACFIS---HCG-WNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFAD 402 (468)
Q Consensus 331 ~~nv~~~~~~p~-~~ll~~~~~~~~I~---hGG-~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~ 402 (468)
.++|++.+|..+ ..++..+++ ||. +-| .+++.||+++|+|+|+.. -..+...+.+. ..|..++..
T Consensus 454 ~d~V~FlG~~~Dv~~~LaaADV--fVlPS~~EGfp~vlLEAMA~GlPVVATd----vGG~~EiV~dG-~nG~LVp~~ 523 (578)
T PRK15490 454 LERILFVGASRDVGYWLQKMNV--FILFSRYEGLPNVLIEAQMVGVPVISTP----AGGSAECFIEG-VSGFILDDA 523 (578)
T ss_pred CCcEEECCChhhHHHHHHhCCE--EEEcccccCccHHHHHHHHhCCCEEEeC----CCCcHHHcccC-CcEEEECCC
Confidence 578888888654 456766655 885 345 479999999999999874 44566767664 678888764
|
|
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.0051 Score=54.61 Aligned_cols=48 Identities=15% Similarity=0.113 Sum_probs=34.9
Q ss_pred CCCceEEcccCh-HH---HhcCCCCCceeeccC----chhHHHhhhcCCceecccccc
Q 012212 331 SNRGKIVEWAPQ-EK---VLGHSSVACFISHCG----WNSTMEGLSMGVPFLCWPYFS 380 (468)
Q Consensus 331 ~~nv~~~~~~p~-~~---ll~~~~~~~~I~hGG----~~s~~eal~~GvP~v~~P~~~ 380 (468)
.+|+.+.+++++ +. ++.. ++++|+-.. .+++.||+.+|+|+|+....+
T Consensus 160 ~~~v~~~~~~~~~~~~~~~~~~--~di~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~ 215 (229)
T cd01635 160 LDRVIFLGGLDPEELLALLLAA--ADVFVLPSLREGFGLVVLEAMACGLPVIATDVGG 215 (229)
T ss_pred cccEEEeCCCCcHHHHHHHhhc--CCEEEecccccCcChHHHHHHhCCCCEEEcCCCC
Confidence 568888888633 22 3322 455888776 789999999999999987543
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PRK10125 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.079 Score=52.02 Aligned_cols=101 Identities=12% Similarity=0.023 Sum_probs=60.2
Q ss_pred HHHHHHHHHHHhCCCCEE-EEEcCCCCCCcccCCchhHHHHhCCCceEEcccCh----HHHhcCCCCCceeec----cCc
Q 012212 290 QQFAELALGLESLQKPFL-WVIRQDFMNGSRAKFPDGFIERVSNRGKIVEWAPQ----EKVLGHSSVACFISH----CGW 360 (468)
Q Consensus 290 ~~~~~~~~a~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~----~~ll~~~~~~~~I~h----GG~ 360 (468)
.-...+++++..++.++- +.++.+ . ... .+++...++... ..+++.+++ ||.- |-.
T Consensus 256 Kg~~~li~A~~~l~~~~~L~ivG~g----~-~~~--------~~~v~~~g~~~~~~~l~~~y~~aDv--fV~pS~~Egfp 320 (405)
T PRK10125 256 KTDQQLVREMMALGDKIELHTFGKF----S-PFT--------AGNVVNHGFETDKRKLMSALNQMDA--LVFSSRVDNYP 320 (405)
T ss_pred ccHHHHHHHHHhCCCCeEEEEEcCC----C-ccc--------ccceEEecCcCCHHHHHHHHHhCCE--EEECCccccCc
Confidence 345678888887755443 334432 0 011 234555566532 234533444 7763 334
Q ss_pred hhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeeccCCCccCHHHHHHHH
Q 012212 361 NSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGIITRQEIQRKV 416 (468)
Q Consensus 361 ~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~~~~~~t~~~l~~ai 416 (468)
.++.||+++|+|+|+....+ ....+. . +-|+.++.. +.++|++++
T Consensus 321 ~vilEAmA~G~PVVat~~gG----~~Eiv~-~-~~G~lv~~~-----d~~~La~~~ 365 (405)
T PRK10125 321 LILCEALSIGVPVIATHSDA----AREVLQ-K-SGGKTVSEE-----EVLQLAQLS 365 (405)
T ss_pred CHHHHHHHcCCCEEEeCCCC----hHHhEe-C-CcEEEECCC-----CHHHHHhcc
Confidence 78999999999999996543 333333 3 578888764 577788654
|
|
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.098 Score=56.45 Aligned_cols=119 Identities=6% Similarity=-0.042 Sum_probs=66.1
Q ss_pred CCCceEEcccChH---HHhcCCCCCceeec----cCchhHHHhhhcCCceecccccc--chhhh-------HHHHHHHhh
Q 012212 331 SNRGKIVEWAPQE---KVLGHSSVACFISH----CGWNSTMEGLSMGVPFLCWPYFS--DQYQN-------RNYICEAWK 394 (468)
Q Consensus 331 ~~nv~~~~~~p~~---~ll~~~~~~~~I~h----GG~~s~~eal~~GvP~v~~P~~~--DQ~~n-------a~rv~~~lG 394 (468)
+++|++....+.. .+++.+ ++|+.- +=..+.+||+++|+|.|+....+ |.-.. +...-.. +
T Consensus 899 ~~rV~f~g~~de~lah~iyaaA--DiflmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~-~ 975 (1036)
T PLN02316 899 HDRARLCLTYDEPLSHLIYAGA--DFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLE-P 975 (1036)
T ss_pred CCeEEEEecCCHHHHHHHHHhC--cEEEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccC-C
Confidence 4567776444443 467445 448843 32458999999999888765422 22111 1100011 4
Q ss_pred ceeEeeccCCCccCHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHh
Q 012212 395 IGLQFFADENGIITRQEIQRKVLTLLKNDDIRSNSLKLKEVARKSLLGGGSSFRNFESFISDIKM 459 (468)
Q Consensus 395 ~g~~l~~~~~~~~t~~~l~~ai~~~l~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 459 (468)
-|..++. .+++.|..+|.++|.+. .+....+++..++.+...=|-.+.+++.++..++
T Consensus 976 tGflf~~-----~d~~aLa~AL~raL~~~--~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~~LY~~ 1033 (1036)
T PLN02316 976 NGFSFDG-----ADAAGVDYALNRAISAW--YDGRDWFNSLCKRVMEQDWSWNRPALDYMELYHS 1033 (1036)
T ss_pred ceEEeCC-----CCHHHHHHHHHHHHhhh--hhhHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHH
Confidence 5777765 57999999999999742 3333334444444332233334555555544443
|
|
| >TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.025 Score=53.67 Aligned_cols=135 Identities=10% Similarity=0.099 Sum_probs=76.5
Q ss_pred CccEEEEEeccc---ccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCcccCCchhHHHHhCCCceEEcc--cCh-HHHh
Q 012212 273 IRSVVYVAFGSV---AVLSQQQFAELALGLESLQKPFLWVIRQDFMNGSRAKFPDGFIERVSNRGKIVEW--APQ-EKVL 346 (468)
Q Consensus 273 ~~~vv~vs~Gs~---~~~~~~~~~~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~--~p~-~~ll 346 (468)
+++.|.+..|+. ..++.+.+.++++.+.+.++++++..++. .....-..+.+..+ +..+.+- +++ .+++
T Consensus 178 ~~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~~~~~vl~~g~~----~e~~~~~~i~~~~~-~~~l~g~~sL~el~ali 252 (319)
T TIGR02193 178 PAPYAVLLHATSRDDKTWPEERWRELARLLLARGLQIVLPWGND----AEKQRAERIAEALP-GAVVLPKMSLAEVAALL 252 (319)
T ss_pred CCCEEEEEeCCCcccCCCCHHHHHHHHHHHHHCCCeEEEeCCCH----HHHHHHHHHHhhCC-CCeecCCCCHHHHHHHH
Confidence 345666666653 55688899999999876677766654433 11111122322222 2334433 333 5578
Q ss_pred cCCCCCceeeccCchhHHHhhhcCCceeccccccchhhhHHHHHHHhhce-eEeeccCCCccCHHHHHHHHHHHh
Q 012212 347 GHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIG-LQFFADENGIITRQEIQRKVLTLL 420 (468)
Q Consensus 347 ~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g-~~l~~~~~~~~t~~~l~~ai~~~l 420 (468)
+++++ +|+. -.|.+.=|.+.|+|+|++ ++ +.+..+-.= +|-. ..+.......++++++.++|+++|
T Consensus 253 ~~a~l--~I~~-DSgp~HlAaa~g~P~i~l--fg--~t~p~~~~P-~~~~~~~~~~~~~~~I~~~~V~~ai~~~~ 319 (319)
T TIGR02193 253 AGADA--VVGV-DTGLTHLAAALDKPTVTL--YG--ATDPGRTGG-YGKPNVALLGESGANPTPDEVLAALEELL 319 (319)
T ss_pred HcCCE--EEeC-CChHHHHHHHcCCCEEEE--EC--CCCHhhccc-CCCCceEEccCccCCCCHHHHHHHHHhhC
Confidence 66655 9987 667788888999999876 11 112222111 1211 111111133499999999998875
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.00061 Score=55.43 Aligned_cols=80 Identities=18% Similarity=0.258 Sum_probs=49.3
Q ss_pred CCCceEEcccCh-HHHhcCCCCCceee--ccC-chhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeeccCCCc
Q 012212 331 SNRGKIVEWAPQ-EKVLGHSSVACFIS--HCG-WNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGI 406 (468)
Q Consensus 331 ~~nv~~~~~~p~-~~ll~~~~~~~~I~--hGG-~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~~~~~ 406 (468)
.+|+++.+|++. .++++.+++.+..+ +.| .+++.|++++|+|+|+.+. .....++.. +.|..+ .
T Consensus 52 ~~~v~~~g~~~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~-----~~~~~~~~~-~~~~~~-~----- 119 (135)
T PF13692_consen 52 RPNVRFHGFVEELPEILAAADVGLIPSRFNEGFPNKLLEAMAAGKPVIASDN-----GAEGIVEED-GCGVLV-A----- 119 (135)
T ss_dssp HCTEEEE-S-HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHH-----HCHCHS----SEEEE--T-----
T ss_pred CCCEEEcCCHHHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhCCCEEECCc-----chhhheeec-CCeEEE-C-----
Confidence 569999999865 55777777644433 223 4899999999999999865 122333343 788777 3
Q ss_pred cCHHHHHHHHHHHhcC
Q 012212 407 ITRQEIQRKVLTLLKN 422 (468)
Q Consensus 407 ~t~~~l~~ai~~~l~~ 422 (468)
-+++++.++|+++++|
T Consensus 120 ~~~~~l~~~i~~l~~d 135 (135)
T PF13692_consen 120 NDPEELAEAIERLLND 135 (135)
T ss_dssp T-HHHHHHHHHHHHH-
T ss_pred CCHHHHHHHHHHHhcC
Confidence 4799999999999876
|
|
| >PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.012 Score=48.13 Aligned_cols=103 Identities=18% Similarity=0.233 Sum_probs=64.8
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCCCCCCCcCCCCCHHHHH
Q 012212 6 HVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDGLELQAADREDPLKLG 85 (468)
Q Consensus 6 ~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 85 (468)
|||+++.....| ...+++.|.++||+|++++.....+.... ..++.+..++... . .....+
T Consensus 1 KIl~i~~~~~~~---~~~~~~~L~~~g~~V~ii~~~~~~~~~~~---------~~~i~~~~~~~~~------k-~~~~~~ 61 (139)
T PF13477_consen 1 KILLIGNTPSTF---IYNLAKELKKRGYDVHIITPRNDYEKYEI---------IEGIKVIRLPSPR------K-SPLNYI 61 (139)
T ss_pred CEEEEecCcHHH---HHHHHHHHHHCCCEEEEEEcCCCchhhhH---------hCCeEEEEecCCC------C-ccHHHH
Confidence 577776655555 56789999999999999999655433322 1678888885321 1 112222
Q ss_pred HHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCcc---cHHHHHHHhC-CceEEEcc
Q 012212 86 ESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVG---SALEVAESMG-IARAAVVP 140 (468)
Q Consensus 86 ~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~---~~~~~A~~lg-iP~v~~~~ 140 (468)
. .. .+..++++ .+||+|.+-.... .+..++...+ +|++....
T Consensus 62 ----~-~~-~l~k~ik~-------~~~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~~h 107 (139)
T PF13477_consen 62 ----K-YF-RLRKIIKK-------EKPDVIHCHTPSPYGLFAMLAKKLLKNKKVIYTVH 107 (139)
T ss_pred ----H-HH-HHHHHhcc-------CCCCEEEEecCChHHHHHHHHHHHcCCCCEEEEec
Confidence 1 12 24445544 5699998887654 2334667788 99886543
|
|
| >PRK09814 beta-1,6-galactofuranosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0039 Score=59.54 Aligned_cols=108 Identities=16% Similarity=0.268 Sum_probs=77.2
Q ss_pred CCCceEEcccChHHHhcC-C-CCCceeec-------cCc------hhHHHhhhcCCceeccccccchhhhHHHHHHHhhc
Q 012212 331 SNRGKIVEWAPQEKVLGH-S-SVACFISH-------CGW------NSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKI 395 (468)
Q Consensus 331 ~~nv~~~~~~p~~~ll~~-~-~~~~~I~h-------GG~------~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~ 395 (468)
.+||.+.+|+|+.++..+ . +..++... |.+ +-+.+.+++|+|+|+. ++...+..|++. ++
T Consensus 206 ~~~V~f~G~~~~eel~~~l~~~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~----~~~~~~~~V~~~-~~ 280 (333)
T PRK09814 206 SANISYKGWFDPEELPNELSKGFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVW----SKAAIADFIVEN-GL 280 (333)
T ss_pred CCCeEEecCCCHHHHHHHHhcCcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEEC----CCccHHHHHHhC-Cc
Confidence 578899999999775421 1 22222211 111 2367789999999985 667888899996 99
Q ss_pred eeEeeccCCCccCHHHHHHHHHHHhcChH---HHHHHHHHHHHHHHHhcCCCchHHHHHHHHH
Q 012212 396 GLQFFADENGIITRQEIQRKVLTLLKNDD---IRSNSLKLKEVARKSLLGGGSSFRNFESFIS 455 (468)
Q Consensus 396 g~~l~~~~~~~~t~~~l~~ai~~~l~~~~---~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 455 (468)
|+.++ +.+++.+++.++.. ++ +++|++++++++++ |.--.+++++++.
T Consensus 281 G~~v~-------~~~el~~~l~~~~~-~~~~~m~~n~~~~~~~~~~----g~~~~~~~~~~~~ 331 (333)
T PRK09814 281 GFVVD-------SLEELPEIIDNITE-EEYQEMVENVKKISKLLRN----GYFTKKALVDAIK 331 (333)
T ss_pred eEEeC-------CHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHHhc----chhHHHHHHHHHh
Confidence 99986 35688989988643 33 78999999999988 6666677776654
|
|
| >PRK10422 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.4 Score=46.14 Aligned_cols=109 Identities=10% Similarity=0.097 Sum_probs=72.0
Q ss_pred CCC-CCEEEEEcCCCccChHHHHHHHHHHHHC--CCEEEEEECCcchHHHHHhhhhhccCCCCCeEE-EEcCCCCCCCcC
Q 012212 1 MSR-QPHVLVIPYPAQGHVAPLMKLATKIAER--AIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKL-VTIPDGLELQAA 76 (468)
Q Consensus 1 m~~-~~~Il~~~~~~~GH~~p~~~LA~~L~~r--GH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~ 76 (468)
|.+ ++|||++-..+.|++.-..++.++|.++ +.+|++++.+.+.+.++.. +.++- +.++..
T Consensus 1 ~~~~~~~ILii~~~~iGD~vl~~P~l~~Lk~~~P~a~I~~l~~~~~~~l~~~~---------P~id~vi~~~~~------ 65 (352)
T PRK10422 1 MDKPFRRILIIKMRFHGDMLLTTPVISSLKKNYPDAKIDVLLYQDTIPILSEN---------PEINALYGIKNK------ 65 (352)
T ss_pred CCCCCceEEEEEecccCceeeHHHHHHHHHHHCCCCeEEEEeccChHHHhccC---------CCceEEEEeccc------
Confidence 654 7899999999999999999999999987 8999999999888766542 34432 223211
Q ss_pred CCCCHHHHHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCcccHHHHHHHhCCceEE
Q 012212 77 DREDPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVGSALEVAESMGIARAA 137 (468)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~lgiP~v~ 137 (468)
......- + ..+..++..++. .++|++|.=........++...|.|..+
T Consensus 66 -~~~~~~~---~-----~~~~~l~~~lr~----~~yD~vidl~~~~~s~ll~~l~~a~~ri 113 (352)
T PRK10422 66 -KAGASEK---I-----KNFFSLIKVLRA----NKYDLIVNLTDQWMVALLVRLLNARVKI 113 (352)
T ss_pred -cccHHHH---H-----HHHHHHHHHHhh----CCCCEEEEcccchHHHHHHHHhCCCeEE
Confidence 0011100 0 112344555655 5699999654333445667777887755
|
|
| >COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.04 Score=54.23 Aligned_cols=133 Identities=18% Similarity=0.207 Sum_probs=88.6
Q ss_pred CccEEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCcccCCchhHHHHh------CCCceEEcccChHHHh
Q 012212 273 IRSVVYVAFGSVAVLSQQQFAELALGLESLQKPFLWVIRQDFMNGSRAKFPDGFIERV------SNRGKIVEWAPQEKVL 346 (468)
Q Consensus 273 ~~~vv~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~------~~nv~~~~~~p~~~ll 346 (468)
++.+||++++......++.+..-.+-++..+.-++|..+++ ..+.....+++.. .++.++.+-.|..+-+
T Consensus 428 ~~avVf~c~~n~~K~~pev~~~wmqIL~~vP~Svl~L~~~~----~~~~~~~~l~~la~~~Gv~~eRL~f~p~~~~~~h~ 503 (620)
T COG3914 428 EDAVVFCCFNNYFKITPEVFALWMQILSAVPNSVLLLKAGG----DDAEINARLRDLAEREGVDSERLRFLPPAPNEDHR 503 (620)
T ss_pred CCeEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEecCC----CcHHHHHHHHHHHHHcCCChhheeecCCCCCHHHH
Confidence 44699999999999999999998888888899999998875 1122222222111 5677777777765433
Q ss_pred c-CCCCCcee---eccCchhHHHhhhcCCceeccccccchhh--hHHH-HHHHhhceeEeeccCCCccCHHHHHHHHH
Q 012212 347 G-HSSVACFI---SHCGWNSTMEGLSMGVPFLCWPYFSDQYQ--NRNY-ICEAWKIGLQFFADENGIITRQEIQRKVL 417 (468)
Q Consensus 347 ~-~~~~~~~I---~hGG~~s~~eal~~GvP~v~~P~~~DQ~~--na~r-v~~~lG~g~~l~~~~~~~~t~~~l~~ai~ 417 (468)
+ +--.|+|. --||..|..|+|.+|||+|.. .++|+. |+.- ++. .|+-..+-.+ .++-|+.+++
T Consensus 504 a~~~iADlvLDTyPY~g~TTa~daLwm~vPVlT~--~G~~FasR~~~si~~~-agi~e~vA~s-----~~dYV~~av~ 573 (620)
T COG3914 504 ARYGIADLVLDTYPYGGHTTASDALWMGVPVLTR--VGEQFASRNGASIATN-AGIPELVADS-----RADYVEKAVA 573 (620)
T ss_pred HhhchhheeeecccCCCccchHHHHHhcCceeee--ccHHHHHhhhHHHHHh-cCCchhhcCC-----HHHHHHHHHH
Confidence 2 22223365 469999999999999999998 466663 3333 333 3554444432 3666777773
|
|
| >KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.04 Score=54.53 Aligned_cols=150 Identities=19% Similarity=0.249 Sum_probs=94.5
Q ss_pred CccEEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCcccCCchhHHH---H---hCCCceEEcccChHH--
Q 012212 273 IRSVVYVAFGSVAVLSQQQFAELALGLESLQKPFLWVIRQDFMNGSRAKFPDGFIE---R---VSNRGKIVEWAPQEK-- 344 (468)
Q Consensus 273 ~~~vv~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~---~---~~~nv~~~~~~p~~~-- 344 (468)
++.|||++|--....+++.+++.++-+...+.-++|......-.+ ..|.. . .++++++.+-++..+
T Consensus 757 ~d~vvf~~FNqLyKidP~~l~~W~~ILk~VPnS~LwllrfPa~ge------~rf~ty~~~~Gl~p~riifs~va~k~eHv 830 (966)
T KOG4626|consen 757 EDAVVFCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGE------QRFRTYAEQLGLEPDRIIFSPVAAKEEHV 830 (966)
T ss_pred CCeEEEeechhhhcCCHHHHHHHHHHHHhCCcceeEEEeccccch------HHHHHHHHHhCCCccceeeccccchHHHH
Confidence 456999999888888999999999999999999999988662222 22221 1 156666666655433
Q ss_pred ---HhcCCCCCceeeccCchhHHHhhhcCCceeccccccchhhhH-HHHHHHhhceeEeeccCCCccCHHHHHHHHHHHh
Q 012212 345 ---VLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNR-NYICEAWKIGLQFFADENGIITRQEIQRKVLTLL 420 (468)
Q Consensus 345 ---ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~~~DQ~~na-~rv~~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l 420 (468)
.|..-.++-+.++ |..|.++.|++|||||.+|.-.=-..-| -.+.. +|+|-.+.+. ..|-..-+|+ +=
T Consensus 831 rr~~LaDv~LDTplcn-GhTTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~-~Gl~hliak~-----~eEY~~iaV~-La 902 (966)
T KOG4626|consen 831 RRGQLADVCLDTPLCN-GHTTGMDVLWAGVPMVTMPGETLASRVAASLLTA-LGLGHLIAKN-----REEYVQIAVR-LA 902 (966)
T ss_pred HhhhhhhhcccCcCcC-CcccchhhhccCCceeecccHHHHHHHHHHHHHH-cccHHHHhhh-----HHHHHHHHHH-hh
Confidence 2222223445565 6788999999999999999633222222 23444 6888766542 2444555554 33
Q ss_pred cChHHHHHHHHHHHHHHHH
Q 012212 421 KNDDIRSNSLKLKEVARKS 439 (468)
Q Consensus 421 ~~~~~r~~a~~l~~~~~~~ 439 (468)
.|.+ ..++|+.+++++
T Consensus 903 td~~---~L~~lr~~l~~~ 918 (966)
T KOG4626|consen 903 TDKE---YLKKLRAKLRKA 918 (966)
T ss_pred cCHH---HHHHHHHHHHHH
Confidence 3444 344455555554
|
|
| >PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.43 Score=44.78 Aligned_cols=101 Identities=14% Similarity=0.055 Sum_probs=57.4
Q ss_pred ccEEEEEeccc---ccCCHHHHHHHHH----HHHhCCCCEEEEEcCCCCCCcccCCchhHHHHh--CCCceEE---cccC
Q 012212 274 RSVVYVAFGSV---AVLSQQQFAELAL----GLESLQKPFLWVIRQDFMNGSRAKFPDGFIERV--SNRGKIV---EWAP 341 (468)
Q Consensus 274 ~~vv~vs~Gs~---~~~~~~~~~~~~~----a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~nv~~~---~~~p 341 (468)
++.+.|-.|.- ...+.+....+++ ..+..+..++++++..+ ....-..+.+.. .+.+.+. +.=|
T Consensus 146 ~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~~~~~vttSRRT----p~~~~~~L~~~~~~~~~~~~~~~~~~nP 221 (311)
T PF06258_consen 146 RPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYGGSLLVTTSRRT----PPEAEAALRELLKDNPGVYIWDGTGENP 221 (311)
T ss_pred CCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCCCeEEEEcCCCC----cHHHHHHHHHhhcCCCceEEecCCCCCc
Confidence 44566666643 4455664444433 33444545666665541 111111222222 2333333 2237
Q ss_pred hHHHhcCCCCCceeeccCc-hhHHHhhhcCCceecccccc
Q 012212 342 QEKVLGHSSVACFISHCGW-NSTMEGLSMGVPFLCWPYFS 380 (468)
Q Consensus 342 ~~~ll~~~~~~~~I~hGG~-~s~~eal~~GvP~v~~P~~~ 380 (468)
+..+|+.++. +|.=+.. +=+.||+..|+|+.+++.-.
T Consensus 222 y~~~La~ad~--i~VT~DSvSMvsEA~~tG~pV~v~~l~~ 259 (311)
T PF06258_consen 222 YLGFLAAADA--IVVTEDSVSMVSEAAATGKPVYVLPLPG 259 (311)
T ss_pred HHHHHHhCCE--EEEcCccHHHHHHHHHcCCCEEEecCCC
Confidence 8889977765 6666665 67899999999999999865
|
The function of this family is unknown. |
| >PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.72 Score=44.29 Aligned_cols=103 Identities=16% Similarity=0.143 Sum_probs=69.7
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHHC--CCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEE-cCCCCCCCcCCCCCH
Q 012212 5 PHVLVIPYPAQGHVAPLMKLATKIAER--AIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVT-IPDGLELQAADREDP 81 (468)
Q Consensus 5 ~~Il~~~~~~~GH~~p~~~LA~~L~~r--GH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~ 81 (468)
||||++-..+.|++.-..++.++|+++ +.+|++++.+.+.+.++.. +.++-+. ++.. ...
T Consensus 1 mrILii~~~~iGD~il~tP~l~~Lk~~~P~a~I~~l~~~~~~~l~~~~---------P~vd~vi~~~~~--------~~~ 63 (348)
T PRK10916 1 MKILVIGPSWVGDMMMSQSLYRTLKARYPQAIIDVMAPAWCRPLLSRM---------PEVNEAIPMPLG--------HGA 63 (348)
T ss_pred CcEEEEccCcccHHHhHHHHHHHHHHHCCCCeEEEEechhhHHHHhcC---------CccCEEEecccc--------cch
Confidence 589999999999999999999999986 8999999998887777653 4444332 2210 000
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCcccHHHHHHHhCCceEE
Q 012212 82 LKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVGSALEVAESMGIARAA 137 (468)
Q Consensus 82 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~lgiP~v~ 137 (468)
..+ ....+++..++. .++|++|.=....-+..++...|+|.-+
T Consensus 64 ~~~---------~~~~~l~~~lr~----~~yD~vidl~~~~~s~~l~~~~~~~~ri 106 (348)
T PRK10916 64 LEI---------GERRRLGHSLRE----KRYDRAYVLPNSFKSALVPFFAGIPHRT 106 (348)
T ss_pred hhh---------HHHHHHHHHHHh----cCCCEEEECCCcHHHHHHHHHcCCCeEe
Confidence 010 112344555655 5699998654444556677777888654
|
|
| >PHA01633 putative glycosyl transferase group 1 | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.099 Score=49.48 Aligned_cols=84 Identities=14% Similarity=0.137 Sum_probs=54.7
Q ss_pred CCCceEE---cccChH---HHhcCCCCCceeec---cC-chhHHHhhhcCCceecccc------ccch------hhhHHH
Q 012212 331 SNRGKIV---EWAPQE---KVLGHSSVACFISH---CG-WNSTMEGLSMGVPFLCWPY------FSDQ------YQNRNY 388 (468)
Q Consensus 331 ~~nv~~~---~~~p~~---~ll~~~~~~~~I~h---GG-~~s~~eal~~GvP~v~~P~------~~DQ------~~na~r 388 (468)
++++++. +++++. ++++.+++ ||.- =| ..++.||+++|+|+|+.-. .+|+ .++...
T Consensus 200 ~~~V~f~g~~G~~~~~dl~~~y~~aDi--fV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~ 277 (335)
T PHA01633 200 PANVHFVAEFGHNSREYIFAFYGAMDF--TIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVEE 277 (335)
T ss_pred CCcEEEEecCCCCCHHHHHHHHHhCCE--EEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHHH
Confidence 6788887 455654 45655555 8863 24 4689999999999998632 2332 333333
Q ss_pred HH--HHhhceeEeeccCCCccCHHHHHHHHHHHhcC
Q 012212 389 IC--EAWKIGLQFFADENGIITRQEIQRKVLTLLKN 422 (468)
Q Consensus 389 v~--~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~ 422 (468)
.. +. |.|..++. .++++++++|.+++..
T Consensus 278 ~~~~~~-g~g~~~~~-----~d~~~la~ai~~~~~~ 307 (335)
T PHA01633 278 YYDKEH-GQKWKIHK-----FQIEDMANAIILAFEL 307 (335)
T ss_pred hcCccc-CceeeecC-----CCHHHHHHHHHHHHhc
Confidence 22 23 56666654 7899999999999543
|
|
| >COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.79 Score=43.72 Aligned_cols=107 Identities=18% Similarity=0.117 Sum_probs=72.0
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHHCC--CEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCCCCCCCcCCCCCH
Q 012212 4 QPHVLVIPYPAQGHVAPLMKLATKIAERA--IKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDGLELQAADREDP 81 (468)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~~~LA~~L~~rG--H~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 81 (468)
|||||++-..+.|++.-..++-..|+++. .+++|++.+.+.+..... +.++-+..-.. . .. +
T Consensus 1 ~~kIliir~~~iGD~vlt~p~~~~lk~~~P~a~i~~~~~~~~~~i~~~~---------p~I~~vi~~~~--~---~~-~- 64 (334)
T COG0859 1 MMKILVIRLSKLGDVVLTLPLLRTLKKAYPNAKIDVLVPKGFAPILKLN---------PEIDKVIIIDK--K---KK-G- 64 (334)
T ss_pred CceEEEEeccchhHHHhHHHHHHHHHHHCCCCEEEEEeccchHHHHhcC---------hHhhhhccccc--c---cc-c-
Confidence 57999999999999999999999999985 999999999888777653 22222211110 0 00 0
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCcccHHHHHHHhCCceEEEc
Q 012212 82 LKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVGSALEVAESMGIARAAVV 139 (468)
Q Consensus 82 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~lgiP~v~~~ 139 (468)
........+.+.+++ .++|+||.=.-..-...++...++|...-.
T Consensus 65 ---------~~~~~~~~l~~~lr~----~~yD~vidl~~~~ksa~l~~~~~~~~r~g~ 109 (334)
T COG0859 65 ---------LGLKERLALLRTLRK----ERYDAVIDLQGLLKSALLALLLGIPFRIGF 109 (334)
T ss_pred ---------cchHHHHHHHHHhhc----cCCCEEEECcccHHHHHHHHHhCCCccccc
Confidence 111223445555554 459999876665566667778888876533
|
|
| >PF06722 DUF1205: Protein of unknown function (DUF1205); InterPro: IPR010610 This entry represents a conserved region of unknown function within bacterial glycosyl transferases | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.011 Score=44.61 Aligned_cols=53 Identities=19% Similarity=0.243 Sum_probs=43.8
Q ss_pred CCchhhhhhcccCccEEEEEecccccC---C--HHHHHHHHHHHHhCCCCEEEEEcCC
Q 012212 261 DSSCLSWLDEQAIRSVVYVAFGSVAVL---S--QQQFAELALGLESLQKPFLWVIRQD 313 (468)
Q Consensus 261 ~~~l~~~l~~~~~~~vv~vs~Gs~~~~---~--~~~~~~~~~a~~~~~~~~l~~~~~~ 313 (468)
...+.+|+.....++-|++|+|+.... . ...+..++++++.++..++..+...
T Consensus 27 ~~~~P~Wl~~~~~RpRVcvT~G~~~~~~~g~~~~~~l~~ll~ala~ldvEvV~a~~~~ 84 (97)
T PF06722_consen 27 PAVVPDWLLEPPGRPRVCVTLGTSVRMFFGPGGVPLLRRLLEALAGLDVEVVVALPAA 84 (97)
T ss_dssp SEEEEGGGSSSTSSEEEEEEETHHHCHHHSCHHHCHHHHHHHHHHTSSSEEEEEETTC
T ss_pred CCCCCcccccCCCCCEEEEEcCCCccccccccchHHHHHHHHHHhhCCcEEEEECCHH
Confidence 445668999888999999999987432 2 2588999999999999999999866
|
Many proteins containing this domain are members of the glycosyl transferase family 28 IPR004276 from INTERPRO.; PDB: 3OTH_A 3OTG_A 3OTI_A 3D0R_A 3D0Q_B 2P6P_A 3UYK_A 3UYL_B 3TSA_B 2YJN_A. |
| >PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional | Back alignment and domain information |
|---|
Probab=96.15 E-value=1.1 Score=42.58 Aligned_cols=45 Identities=16% Similarity=0.093 Sum_probs=40.2
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHHC--CCEEEEEECCcchHHHHH
Q 012212 5 PHVLVIPYPAQGHVAPLMKLATKIAER--AIKVTVVNTQFIHKKIIA 49 (468)
Q Consensus 5 ~~Il~~~~~~~GH~~p~~~LA~~L~~r--GH~Vt~~~~~~~~~~i~~ 49 (468)
||||++-..+.|++.-..++.+.|+++ +.+|+|++.+.+.+.++.
T Consensus 1 m~ILii~~~~iGD~v~~~p~~~~lk~~~P~a~I~~l~~~~~~~l~~~ 47 (322)
T PRK10964 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIQFDWVVEEGFAQIPSW 47 (322)
T ss_pred CeEEEEeccchHHHHhHHHHHHHHHHhCCCCEEEEEECHHHHHHHhc
Confidence 589999999999999999999999987 999999999887766543
|
|
| >TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.92 Score=43.24 Aligned_cols=102 Identities=18% Similarity=0.171 Sum_probs=67.7
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHHC--CCEEEEEECCcchHHHHHhhhhhccCCCCCeEEE-EcCCCCCCCcCCCCCHH
Q 012212 6 HVLVIPYPAQGHVAPLMKLATKIAER--AIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLV-TIPDGLELQAADREDPL 82 (468)
Q Consensus 6 ~Il~~~~~~~GH~~p~~~LA~~L~~r--GH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~ 82 (468)
|||++-..+.|++.-..++.++|.++ +.+|+|++.+.+.+.++.. +.++-+ .++.. ....
T Consensus 1 rILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~~~~---------p~id~v~~~~~~--------~~~~ 63 (334)
T TIGR02195 1 KILVIGPSWVGDMVMAQSLYRLLKKRYPQAVIDVLAPAWCRPLLERM---------PEIRQAIDMPLG--------HGAL 63 (334)
T ss_pred CEEEEccchhHHHHHHHHHHHHHHHHCCCCEEEEEechhhHHHHhcC---------chhceeeecCCc--------ccch
Confidence 68999999999999999999999987 8999999998776666543 334322 12210 0000
Q ss_pred HHHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCcccHHHHHHHhCCceEE
Q 012212 83 KLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVGSALEVAESMGIARAA 137 (468)
Q Consensus 83 ~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~lgiP~v~ 137 (468)
.. ....+++..++. .++|++|.-....-+..++...|+|.-+
T Consensus 64 ~~---------~~~~~~~~~lr~----~~yD~vi~l~~~~~s~ll~~~~~~~~ri 105 (334)
T TIGR02195 64 EL---------TERRRLGRSLRE----ERYDQAIVLPNSLKSALIPFFAGIPHRT 105 (334)
T ss_pred hh---------hHHHHHHHHHhh----cCCCEEEECCCCHHHHHHHHHcCCCcee
Confidence 10 012344555554 4699999865555566677777888643
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.32 Score=46.25 Aligned_cols=105 Identities=11% Similarity=0.091 Sum_probs=58.6
Q ss_pred cccChHH---HhcCCCCCceee---ccC-chhHHHhhhcCCceeccccccchhhhHHHHHHH------------------
Q 012212 338 EWAPQEK---VLGHSSVACFIS---HCG-WNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEA------------------ 392 (468)
Q Consensus 338 ~~~p~~~---ll~~~~~~~~I~---hGG-~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~------------------ 392 (468)
.++|+.+ +++.+++ +|. ..| ..++.||+++|+|+|+.-..+ ....+...
T Consensus 196 ~~v~~~~l~~~y~~aDv--~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg----~~E~i~~~~ng~lv~~~~~~~~~~~~ 269 (331)
T PHA01630 196 TPLPDDDIYSLFAGCDI--LFYPVRGGAFEIPVIEALALGLDVVVTEKGA----WSEWVLSNLDVYWIKSGRKPKLWYTN 269 (331)
T ss_pred ccCCHHHHHHHHHhCCE--EEECCccccCChHHHHHHHcCCCEEEeCCCC----chhhccCCCceEEeeecccccccccC
Confidence 4477655 5655555 663 333 468999999999999985432 12222221
Q ss_pred -hhceeEeeccCCCccCHHHHHHHHHHHhcC---hHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHH
Q 012212 393 -WKIGLQFFADENGIITRQEIQRKVLTLLKN---DDIRSNSLKLKEVARKSLLGGGSSFRNFESFISDIK 458 (468)
Q Consensus 393 -lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~---~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 458 (468)
-++|..++ .+.+++.+++.++|.| ++++++...-+....+ .=+-.+..+++.+.++
T Consensus 270 ~~~~G~~v~------~~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~----~fs~~~ia~k~~~l~~ 329 (331)
T PHA01630 270 PIHVGYFLD------PDIEDAYQKLLEALANWTPEKKKENLEGRAILYRE----NYSYNAIAKMWEKILE 329 (331)
T ss_pred CcccccccC------CCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHH----hCCHHHHHHHHHHHHh
Confidence 02343332 3567788888888887 4555554444443333 2233444455554443
|
|
| >PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.08 Score=44.53 Aligned_cols=96 Identities=9% Similarity=0.036 Sum_probs=60.5
Q ss_pred HCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCCCCCCCcCCCCCHHHHHHHHHHHhhHHHHHHHHHHhhCCCC
Q 012212 30 ERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDGLELQAADREDPLKLGESVARAMRGCLRDLIEKINQSNDC 109 (468)
Q Consensus 30 ~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~ 109 (468)
++||+|+++|........ .+++...+...-.... ...-...-++......+. +...+..|++.+
T Consensus 1 q~gh~v~fl~~~~~~~~~------------~GV~~~~y~~~~~~~~-~~~~~~~~~e~~~~rg~a-v~~a~~~L~~~G-- 64 (171)
T PF12000_consen 1 QRGHEVVFLTERKRPPIP------------PGVRVVRYRPPRGPTP-GTHPYVRDFEAAVLRGQA-VARAARQLRAQG-- 64 (171)
T ss_pred CCCCEEEEEecCCCCCCC------------CCcEEEEeCCCCCCCC-CCCcccccHHHHHHHHHH-HHHHHHHHHHcC--
Confidence 579999999965433221 3577776654221111 111112223333333444 444555666666
Q ss_pred CCceEEEecCCcccHHHHHHHh-CCceEEEccc
Q 012212 110 EPIRCVIADVTVGSALEVAESM-GIARAAVVPF 141 (468)
Q Consensus 110 ~~pDlvi~D~~~~~~~~~A~~l-giP~v~~~~~ 141 (468)
..||+||..+-+-.+..+.+.+ ++|.+.+.-.
T Consensus 65 f~PDvI~~H~GWGe~Lflkdv~P~a~li~Y~E~ 97 (171)
T PF12000_consen 65 FVPDVIIAHPGWGETLFLKDVFPDAPLIGYFEF 97 (171)
T ss_pred CCCCEEEEcCCcchhhhHHHhCCCCcEEEEEEE
Confidence 8899999999888899999999 9999987754
|
This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important. |
| >cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS) | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.89 Score=42.06 Aligned_cols=102 Identities=17% Similarity=0.175 Sum_probs=65.7
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHHCC--CEEEEEECCcchHHHHHhhhhhccCCCCCeEEE-EcCCCCCCCcCCCCCHH
Q 012212 6 HVLVIPYPAQGHVAPLMKLATKIAERA--IKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLV-TIPDGLELQAADREDPL 82 (468)
Q Consensus 6 ~Il~~~~~~~GH~~p~~~LA~~L~~rG--H~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~ 82 (468)
|||++-..+.|++.-..++.++|+++. -+|++++.+.+.+.++.. +.++-+ .++... .....
T Consensus 1 kILii~~~~iGD~i~~~p~l~~Lk~~~P~~~I~~l~~~~~~~l~~~~---------p~id~v~~~~~~~-----~~~~~- 65 (279)
T cd03789 1 RILVIRLSWIGDVVLATPLLRALKARYPDARITVLAPPWFAPLLELM---------PEVDRVIVLPKKH-----GKLGL- 65 (279)
T ss_pred CEEEEecccHHHHHHHHHHHHHHHHHCCCCEEEEEEChhhHHHHhcC---------CccCEEEEcCCcc-----cccch-
Confidence 688888889999999999999999975 899999999887777653 333332 222110 00011
Q ss_pred HHHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCcccHHHHHHHhCCceEE
Q 012212 83 KLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVGSALEVAESMGIARAA 137 (468)
Q Consensus 83 ~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~lgiP~v~ 137 (468)
..+.+++..++. .++|+++.=........++...+++...
T Consensus 66 -----------~~~~~~~~~l~~----~~~D~vi~~~~~~~~~~~~~~~~~~~~~ 105 (279)
T cd03789 66 -----------GARRRLARALRR----RRYDLAIDLQGSLRSALLPFLAGAPRRI 105 (279)
T ss_pred -----------HHHHHHHHHHhh----cCCCEEEECCCccHHHHHHHHhCCCeEE
Confidence 123344555554 4599998765554444456666666543
|
Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative | Back alignment and domain information |
|---|
Probab=95.89 E-value=1.4 Score=42.26 Aligned_cols=105 Identities=10% Similarity=0.082 Sum_probs=69.9
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHHC--CCEEEEEECCcchHHHHHhhhhhccCCCCCeE-EEEcCCCCCCCcCCCCCHH
Q 012212 6 HVLVIPYPAQGHVAPLMKLATKIAER--AIKVTVVNTQFIHKKIIASLQEKAEDSSSQIK-LVTIPDGLELQAADREDPL 82 (468)
Q Consensus 6 ~Il~~~~~~~GH~~p~~~LA~~L~~r--GH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~~~~ 82 (468)
|||++-..+.|++.-..++.++|+++ +.+|++++.+.+.+.++.. +.++ ++.++.... .....
T Consensus 1 rILii~~~~iGD~vl~tp~l~~Lk~~~P~a~I~~l~~~~~~~l~~~~---------p~vd~vi~~~~~~~-----~~~~~ 66 (344)
T TIGR02201 1 RILLIKLRHHGDMLLTTPVISSLKKNYPDAKIDVLLYQETIPILSEN---------PDINALYGLDRKKA-----KAGER 66 (344)
T ss_pred CEEEEEeccccceeeHHHHHHHHHHHCCCCEEEEEECcChHHHHhcC---------CCccEEEEeChhhh-----cchHH
Confidence 68999889999999999999999986 8999999999888777653 4454 333332110 00000
Q ss_pred HHHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCcccHHHHHHHhCCceEE
Q 012212 83 KLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVGSALEVAESMGIARAA 137 (468)
Q Consensus 83 ~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~lgiP~v~ 137 (468)
.+ .. +.+++..++. .++|++|.=.....+..++...|.|.-+
T Consensus 67 ----~~----~~-~~~l~~~lr~----~~yD~vidl~~~~~s~ll~~l~~a~~ri 108 (344)
T TIGR02201 67 ----KL----AN-QFHLIKVLRA----NRYDLVVNLTDQWMVAILVKLLNARVKI 108 (344)
T ss_pred ----HH----HH-HHHHHHHHHh----CCCCEEEECCcchHHHHHHHhcCCCeEE
Confidence 11 11 2234455554 4699998654444667788888999755
|
This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II. |
| >PRK14098 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=95.73 E-value=0.22 Score=50.25 Aligned_cols=116 Identities=10% Similarity=0.046 Sum_probs=67.8
Q ss_pred HhCCCceEEcccChH---HHhcCCCCCceeecc---Cc-hhHHHhhhcCCceecccccc--chhhhHHHHHHHhhceeEe
Q 012212 329 RVSNRGKIVEWAPQE---KVLGHSSVACFISHC---GW-NSTMEGLSMGVPFLCWPYFS--DQYQNRNYICEAWKIGLQF 399 (468)
Q Consensus 329 ~~~~nv~~~~~~p~~---~ll~~~~~~~~I~hG---G~-~s~~eal~~GvP~v~~P~~~--DQ~~na~rv~~~lG~g~~l 399 (468)
+.+++|.+..+++.. .+++.+++ ++.-. |. .+.+||+++|+|.|+....+ |.-.+ ..++. +.|..+
T Consensus 359 ~~~~~V~~~g~~~~~~~~~~~a~aDi--~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~--~~~~~-~~G~l~ 433 (489)
T PRK14098 359 EHPEQVSVQTEFTDAFFHLAIAGLDM--LLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEE--VSEDK-GSGFIF 433 (489)
T ss_pred HCCCCEEEEEecCHHHHHHHHHhCCE--EEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeec--CCCCC-CceeEe
Confidence 346788888888774 46755555 77543 22 47889999999888775432 21110 01122 677777
Q ss_pred eccCCCccCHHHHHHHHHHHh---cChHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhh
Q 012212 400 FADENGIITRQEIQRKVLTLL---KNDDIRSNSLKLKEVARKSLLGGGSSFRNFESFISDIKML 460 (468)
Q Consensus 400 ~~~~~~~~t~~~l~~ai~~~l---~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 460 (468)
+. .+++.+.++|.+++ +|++.++ ++++ +++...=|-.+.+++.++..++.
T Consensus 434 ~~-----~d~~~la~ai~~~l~~~~~~~~~~---~~~~---~~~~~~fsw~~~a~~y~~lY~~~ 486 (489)
T PRK14098 434 HD-----YTPEALVAKLGEALALYHDEERWE---ELVL---EAMERDFSWKNSAEEYAQLYREL 486 (489)
T ss_pred CC-----CCHHHHHHHHHHHHHHHcCHHHHH---HHHH---HHhcCCCChHHHHHHHHHHHHHH
Confidence 65 56899999999876 4544322 2222 22222334455556666555543
|
|
| >TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 | Back alignment and domain information |
|---|
Probab=95.52 E-value=0.38 Score=48.67 Aligned_cols=83 Identities=18% Similarity=0.220 Sum_probs=57.0
Q ss_pred CCceEEcccC--h-HHHhcCCCCCceeecc---CchhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeeccCCC
Q 012212 332 NRGKIVEWAP--Q-EKVLGHSSVACFISHC---GWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENG 405 (468)
Q Consensus 332 ~nv~~~~~~p--~-~~ll~~~~~~~~I~hG---G~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~~~~ 405 (468)
.+|.+.++.. + ...+...++ +|.=+ |.++..||+.+|+|+| .......|+.. .=|..+
T Consensus 409 ~~v~f~gy~~e~dl~~~~~~arl--~id~s~~eg~~~~ieAiS~GiPqI-------nyg~~~~V~d~-~NG~li------ 472 (519)
T TIGR03713 409 ERIAFTTLTNEEDLISALDKLRL--IIDLSKEPDLYTQISGISAGIPQI-------NKVETDYVEHN-KNGYII------ 472 (519)
T ss_pred cEEEEEecCCHHHHHHHHhhheE--EEECCCCCChHHHHHHHHcCCCee-------ecCCceeeEcC-CCcEEe------
Confidence 5677778888 4 446655544 88766 6679999999999999 22233344442 445555
Q ss_pred ccCHHHHHHHHHHHhcChHHHHHHHH
Q 012212 406 IITRQEIQRKVLTLLKNDDIRSNSLK 431 (468)
Q Consensus 406 ~~t~~~l~~ai~~~l~~~~~r~~a~~ 431 (468)
-+.++|.++|..+|.+.+-.+++..
T Consensus 473 -~d~~~l~~al~~~L~~~~~wn~~~~ 497 (519)
T TIGR03713 473 -DDISELLKALDYYLDNLKNWNYSLA 497 (519)
T ss_pred -CCHHHHHHHHHHHHhCHHHHHHHHH
Confidence 2688999999999999874444333
|
This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A | Back alignment and domain information |
|---|
Probab=95.46 E-value=0.02 Score=47.59 Aligned_cols=98 Identities=23% Similarity=0.210 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCCCCCCCcCCCCCHHHHHHHHHHHhhHHHHH
Q 012212 19 APLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDGLELQAADREDPLKLGESVARAMRGCLRD 98 (468)
Q Consensus 19 ~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (468)
.-+..|+++|.++||+|++++.......-. ....++.+..++-..... .......+ ..+..
T Consensus 5 ~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~------~~~~~~~~-----~~~~~ 65 (160)
T PF13579_consen 5 RYVRELARALAARGHEVTVVTPQPDPEDDE--------EEEDGVRVHRLPLPRRPW------PLRLLRFL-----RRLRR 65 (160)
T ss_dssp HHHHHHHHHHHHTT-EEEEEEE---GGG-S--------EEETTEEEEEE--S-SSS------GGGHCCHH-----HHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEEecCCCCcccc--------cccCCceEEeccCCccch------hhhhHHHH-----HHHHH
Confidence 346789999999999999999766554221 111567777776322111 11111111 11233
Q ss_pred HHHHHhhCCCCCCceEEEecCCcc-cHHHHHH-HhCCceEEEcc
Q 012212 99 LIEKINQSNDCEPIRCVIADVTVG-SALEVAE-SMGIARAAVVP 140 (468)
Q Consensus 99 ll~~l~~~~~~~~pDlvi~D~~~~-~~~~~A~-~lgiP~v~~~~ 140 (468)
++ .... .+||+|.+..... ....++. ..++|+++...
T Consensus 66 ~l-~~~~----~~~Dvv~~~~~~~~~~~~~~~~~~~~p~v~~~h 104 (160)
T PF13579_consen 66 LL-AARR----ERPDVVHAHSPTAGLVAALARRRRGIPLVVTVH 104 (160)
T ss_dssp HC-HHCT-------SEEEEEHHHHHHHHHHHHHHHT--EEEE-S
T ss_pred HH-hhhc----cCCeEEEecccchhHHHHHHHHccCCcEEEEEC
Confidence 33 1122 6799999987432 2223444 78999988654
|
|
| >PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [] | Back alignment and domain information |
|---|
Probab=95.41 E-value=0.27 Score=41.61 Aligned_cols=115 Identities=16% Similarity=0.188 Sum_probs=62.6
Q ss_pred EcCCCccChHHHHHHHHHH-HH-CCCEEEEEECCcchH--HHHHhhhhhccCCCCCeEEEEcCCCCCCCcCCCCCHHHHH
Q 012212 10 IPYPAQGHVAPLMKLATKI-AE-RAIKVTVVNTQFIHK--KIIASLQEKAEDSSSQIKLVTIPDGLELQAADREDPLKLG 85 (468)
Q Consensus 10 ~~~~~~GH~~p~~~LA~~L-~~-rGH~Vt~~~~~~~~~--~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 85 (468)
+-.++.||+.-|+.|.+.+ .+ ..++..+++..+... ++.+...... ....+..+|....-. ....
T Consensus 3 ~v~gsGGHt~eml~L~~~~~~~~~~~~~~ivt~~d~~S~~k~~~~~~~~~----~~~~~~~~~r~r~v~-------q~~~ 71 (170)
T PF08660_consen 3 VVLGSGGHTAEMLRLLKALDNDRYQPRTYIVTEGDKQSRSKAEQLEKSSS----KRHKILEIPRAREVG-------QSYL 71 (170)
T ss_pred EEEcCcHHHHHHHHHHHHhhhhcCCCcEEEEEcCCcccHHHHHHHHHhcc----ccceeeccceEEEec-------hhhH
Confidence 3346889999999999999 33 357777777765533 3332221100 111344444221111 1111
Q ss_pred HHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCcc--cHHHHHHHh------CCceEEEcc
Q 012212 86 ESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVG--SALEVAESM------GIARAAVVP 140 (468)
Q Consensus 86 ~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~--~~~~~A~~l------giP~v~~~~ 140 (468)
..........+..+. -+.. .+||+||+..-.. ..+.+|+.+ |.+.|++-+
T Consensus 72 ~~~~~~l~~~~~~~~-il~r----~rPdvii~nGpg~~vp~~~~~~l~~~~~~~~~kiIyIES 129 (170)
T PF08660_consen 72 TSIFTTLRAFLQSLR-ILRR----ERPDVIISNGPGTCVPVCLAAKLLRLLGLRGSKIIYIES 129 (170)
T ss_pred hhHHHHHHHHHHHHH-HHHH----hCCCEEEEcCCceeeHHHHHHHHHHHhhccCCcEEEEEe
Confidence 222222222222221 1222 4699999998766 555788889 999998764
|
|
| >COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=95.16 E-value=2.2 Score=38.06 Aligned_cols=72 Identities=25% Similarity=0.305 Sum_probs=45.7
Q ss_pred HHHHHHhCCCCEEEEEcCCCCCCcccCCchhHHHHhCCC-----ceE-----EcccChHHHhcCCCCCceeeccCc-hhH
Q 012212 295 LALGLESLQKPFLWVIRQDFMNGSRAKFPDGFIERVSNR-----GKI-----VEWAPQEKVLGHSSVACFISHCGW-NST 363 (468)
Q Consensus 295 ~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~n-----v~~-----~~~~p~~~ll~~~~~~~~I~hGG~-~s~ 363 (468)
+.+.+++-+..++++.+.. -|+........| +.+ .++=||.++|+-+ |.+|.-... +-+
T Consensus 189 l~k~l~~~g~~~lisfSRR--------Tp~~~~s~l~~~l~s~~~i~w~~~d~g~NPY~~~La~A--dyii~TaDSinM~ 258 (329)
T COG3660 189 LVKILENQGGSFLISFSRR--------TPDTVKSILKNNLNSSPGIVWNNEDTGYNPYIDMLAAA--DYIISTADSINMC 258 (329)
T ss_pred HHHHHHhCCceEEEEeecC--------CcHHHHHHHHhccccCceeEeCCCCCCCCchHHHHhhc--ceEEEecchhhhh
Confidence 4445666788899888866 122221111221 222 1445999999655 447777665 778
Q ss_pred HHhhhcCCceecc
Q 012212 364 MEGLSMGVPFLCW 376 (468)
Q Consensus 364 ~eal~~GvP~v~~ 376 (468)
.||...|+|+.++
T Consensus 259 sEAasTgkPv~~~ 271 (329)
T COG3660 259 SEAASTGKPVFIL 271 (329)
T ss_pred HHHhccCCCeEEE
Confidence 9999999999654
|
|
| >PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Probab=95.12 E-value=0.21 Score=37.30 Aligned_cols=82 Identities=15% Similarity=0.075 Sum_probs=50.9
Q ss_pred ccCchhHHHhhhcCCceeccccccchhhhHHHHHHHhh-ceeEeeccCCCccCHHHHHHHHHHHhcChHHHHHHHHHHHH
Q 012212 357 HCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWK-IGLQFFADENGIITRQEIQRKVLTLLKNDDIRSNSLKLKEV 435 (468)
Q Consensus 357 hGG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG-~g~~l~~~~~~~~t~~~l~~ai~~~l~~~~~r~~a~~l~~~ 435 (468)
+|-..-+.|++++|+|+|+-.. ......+.. | -++.. -+.+++.++|+.+++|++.+++..+-+.+
T Consensus 9 ~~~~~r~~E~~a~G~~vi~~~~----~~~~~~~~~--~~~~~~~-------~~~~el~~~i~~ll~~~~~~~~ia~~a~~ 75 (92)
T PF13524_consen 9 DGPNMRIFEAMACGTPVISDDS----PGLREIFED--GEHIITY-------NDPEELAEKIEYLLENPEERRRIAKNARE 75 (92)
T ss_pred CCCchHHHHHHHCCCeEEECCh----HHHHHHcCC--CCeEEEE-------CCHHHHHHHHHHHHCCHHHHHHHHHHHHH
Confidence 4556789999999999998743 233322222 3 22222 26999999999999999855554444433
Q ss_pred HHHHhcCCCchHHHHHHHH
Q 012212 436 ARKSLLGGGSSFRNFESFI 454 (468)
Q Consensus 436 ~~~~~~~~g~~~~~~~~~~ 454 (468)
.-. ..=+....+++++
T Consensus 76 ~v~---~~~t~~~~~~~il 91 (92)
T PF13524_consen 76 RVL---KRHTWEHRAEQIL 91 (92)
T ss_pred HHH---HhCCHHHHHHHHH
Confidence 322 1444455555554
|
|
| >KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=94.94 E-value=3.2 Score=38.71 Aligned_cols=126 Identities=13% Similarity=0.056 Sum_probs=79.2
Q ss_pred CCCCEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcch--HHHHHhhhhhccCCCCCeEEEEcCCCCCCCcCCCC
Q 012212 2 SRQPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIH--KKIIASLQEKAEDSSSQIKLVTIPDGLELQAADRE 79 (468)
Q Consensus 2 ~~~~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~--~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 79 (468)
.++.|+.++-.+..||--+|.-=|..|++.|.+|.++..-... +.+.. -++++++.++.--.... .+.
T Consensus 10 ~~k~ra~vvVLGDvGRSPRMqYHA~Sla~~gf~VdliGy~~s~p~e~l~~---------hprI~ih~m~~l~~~~~-~p~ 79 (444)
T KOG2941|consen 10 SKKKRAIVVVLGDVGRSPRMQYHALSLAKLGFQVDLIGYVESIPLEELLN---------HPRIRIHGMPNLPFLQG-GPR 79 (444)
T ss_pred cccceEEEEEecccCCChHHHHHHHHHHHcCCeEEEEEecCCCChHHHhc---------CCceEEEeCCCCcccCC-Cch
Confidence 4678899998899999999999999999999999999876542 23322 28899999985432221 222
Q ss_pred CHHHHHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCc-ccHHHHHHHh----CCceEEEcccchHH
Q 012212 80 DPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTV-GSALEVAESM----GIARAAVVPFGPGS 145 (468)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~-~~~~~~A~~l----giP~v~~~~~~~~~ 145 (468)
-.+-.++.++..+. .+..++. . .++|.+++-.-. .....+|..+ |..+++=|....+.
T Consensus 80 ~~~l~lKvf~Qfl~-Ll~aL~~----~---~~~~~ilvQNPP~iPtliv~~~~~~l~~~KfiIDWHNy~Ys 142 (444)
T KOG2941|consen 80 VLFLPLKVFWQFLS-LLWALFV----L---RPPDIILVQNPPSIPTLIVCVLYSILTGAKFIIDWHNYGYS 142 (444)
T ss_pred hhhhHHHHHHHHHH-HHHHHHh----c---cCCcEEEEeCCCCCchHHHHHHHHHHhcceEEEEehhhHHH
Confidence 22333333332211 2233332 1 568998886533 3555555544 77777766655543
|
|
| >PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family | Back alignment and domain information |
|---|
Probab=94.37 E-value=0.31 Score=42.21 Aligned_cols=42 Identities=14% Similarity=0.099 Sum_probs=30.6
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHH
Q 012212 5 PHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKI 47 (468)
Q Consensus 5 ~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i 47 (468)
||||+.-==+. +-.-+..|+++|.+.||+|+++.+...+-..
T Consensus 1 M~ILlTNDDGi-~a~Gi~aL~~~L~~~g~~V~VvAP~~~~Sg~ 42 (196)
T PF01975_consen 1 MRILLTNDDGI-DAPGIRALAKALSALGHDVVVVAPDSEQSGT 42 (196)
T ss_dssp SEEEEE-SS-T-TSHHHHHHHHHHTTTSSEEEEEEESSSTTTS
T ss_pred CeEEEEcCCCC-CCHHHHHHHHHHHhcCCeEEEEeCCCCCcCc
Confidence 57777753333 4445788999998888999999998876554
|
This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A .... |
| >PRK14099 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=93.71 E-value=1.9 Score=43.41 Aligned_cols=40 Identities=13% Similarity=0.184 Sum_probs=31.7
Q ss_pred CCCEEEEEcCC------CccChHHHHHHHHHHHHCCCEEEEEECCc
Q 012212 3 RQPHVLVIPYP------AQGHVAPLMKLATKIAERAIKVTVVNTQF 42 (468)
Q Consensus 3 ~~~~Il~~~~~------~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~ 42 (468)
+.|||||++.- ..|=-...-+|.++|+++||+|.++.+..
T Consensus 2 ~~~~il~v~~E~~p~~k~ggl~dv~~~lp~~l~~~g~~v~v~~P~y 47 (485)
T PRK14099 2 TPLRVLSVASEIFPLIKTGGLADVAGALPAALKAHGVEVRTLVPGY 47 (485)
T ss_pred CCcEEEEEEeccccccCCCcHHHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 56899988432 33555678899999999999999999854
|
|
| >COG1618 Predicted nucleotide kinase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.48 E-value=0.32 Score=40.00 Aligned_cols=101 Identities=20% Similarity=0.150 Sum_probs=62.8
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCCCCCCCcC------
Q 012212 3 RQPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDGLELQAA------ 76 (468)
Q Consensus 3 ~~~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~------ 76 (468)
.+|||++.-.|+.|-..-++.|++.|.+.|++|-=+-++.-.+.-.. .+++++.+..+-...-.
T Consensus 4 ~~mki~ITG~PGvGKtTl~~ki~e~L~~~g~kvgGf~t~EVR~gGkR----------~GF~Ivdl~tg~~~~la~~~~~~ 73 (179)
T COG1618 4 MAMKIFITGRPGVGKTTLVLKIAEKLREKGYKVGGFITPEVREGGKR----------IGFKIVDLATGEEGILARVGFSR 73 (179)
T ss_pred cceEEEEeCCCCccHHHHHHHHHHHHHhcCceeeeEEeeeeecCCeE----------eeeEEEEccCCceEEEEEcCCCC
Confidence 46899999999999999999999999999999876555543322221 55777777633211110
Q ss_pred -CCCCHHHHHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCcc
Q 012212 77 -DREDPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVG 122 (468)
Q Consensus 77 -~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~ 122 (468)
....+....+.+-+.+-+.++..++. .|+||.|-..+
T Consensus 74 ~rvGkY~V~v~~le~i~~~al~rA~~~---------aDvIIIDEIGp 111 (179)
T COG1618 74 PRVGKYGVNVEGLEEIAIPALRRALEE---------ADVIIIDEIGP 111 (179)
T ss_pred cccceEEeeHHHHHHHhHHHHHHHhhc---------CCEEEEecccc
Confidence 11222223333333333334444433 79999997654
|
|
| >PF10093 DUF2331: Uncharacterized protein conserved in bacteria (DUF2331); InterPro: IPR016633 This entry describes a conserved hypothetical protein that typically is encoded next to the gene efp for translation elongation factor P | Back alignment and domain information |
|---|
Probab=93.38 E-value=7.6 Score=37.12 Aligned_cols=87 Identities=18% Similarity=0.227 Sum_probs=53.3
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEEcCCCCCCccc-CCc-----hhHHHHhCCCceE--EcccCh---HHHhcCCCCCceee
Q 012212 288 SQQQFAELALGLESLQKPFLWVIRQDFMNGSRA-KFP-----DGFIERVSNRGKI--VEWAPQ---EKVLGHSSVACFIS 356 (468)
Q Consensus 288 ~~~~~~~~~~a~~~~~~~~l~~~~~~~~~~~~~-~~~-----~~~~~~~~~nv~~--~~~~p~---~~ll~~~~~~~~I~ 356 (468)
+..-+..++++++..+.++.+.+..+....... -+. .+- ....+++.+ .+|+|| +.+|-.+++ -+=
T Consensus 193 e~~~l~~ll~~~~~~~~pv~llvp~g~~~~~~~~~~~~~~~~~g~-~~~~g~l~l~~lPF~~Q~~yD~LLw~cD~--NfV 269 (374)
T PF10093_consen 193 ENAALASLLDAWAASPKPVHLLVPEGRALNSLAAWLGDALLQAGD-SWQRGNLTLHVLPFVPQDDYDRLLWACDF--NFV 269 (374)
T ss_pred CchHHHHHHHHHhcCCCCeEEEecCCccHHHHHHHhccccccCcc-ccccCCeEEEECCCCCHHHHHHHHHhCcc--ceE
Confidence 555678888888887777776666551111000 000 000 011355555 499998 458866665 333
Q ss_pred ccCchhHHHhhhcCCcee--cccc
Q 012212 357 HCGWNSTMEGLSMGVPFL--CWPY 378 (468)
Q Consensus 357 hGG~~s~~eal~~GvP~v--~~P~ 378 (468)
- |=-|+.-|..+|+|.| +.|+
T Consensus 270 R-GEDSfVRAqwAgkPFvWhIYpQ 292 (374)
T PF10093_consen 270 R-GEDSFVRAQWAGKPFVWHIYPQ 292 (374)
T ss_pred e-cchHHHHHHHhCCCceEecCcC
Confidence 3 7789999999999998 6654
|
The function is unknown. |
| >TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=93.00 E-value=0.71 Score=45.99 Aligned_cols=101 Identities=14% Similarity=0.075 Sum_probs=66.8
Q ss_pred cccChHHH---hcCCCCCceee---ccCc-hhHHHhhhcCCc----eeccccccchhhhHHHHHHHhhceeEeeccCCCc
Q 012212 338 EWAPQEKV---LGHSSVACFIS---HCGW-NSTMEGLSMGVP----FLCWPYFSDQYQNRNYICEAWKIGLQFFADENGI 406 (468)
Q Consensus 338 ~~~p~~~l---l~~~~~~~~I~---hGG~-~s~~eal~~GvP----~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~~~~~ 406 (468)
+.+|+.++ +..+++ ++. +=|+ .++.||+++|+| +|+.-+.+ .+.. ++-|+.++.
T Consensus 342 ~~~~~~el~aly~aaDv--~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G----~~~~----l~~gllVnP----- 406 (456)
T TIGR02400 342 RSYDREELMALYRAADV--GLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAG----AAQE----LNGALLVNP----- 406 (456)
T ss_pred CCCCHHHHHHHHHhCcE--EEECccccccCccHHHHHHhcCCCCceEEEeCCCC----ChHH----hCCcEEECC-----
Confidence 56677654 544544 775 3465 588899999999 66554332 2222 345677766
Q ss_pred cCHHHHHHHHHHHhcChH--HHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHH
Q 012212 407 ITRQEIQRKVLTLLKNDD--IRSNSLKLKEVARKSLLGGGSSFRNFESFISDIK 458 (468)
Q Consensus 407 ~t~~~l~~ai~~~l~~~~--~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 458 (468)
.+.++++++|.++|+++. .+++.+++.+.... -+...-+++++.++.
T Consensus 407 ~d~~~lA~aI~~aL~~~~~er~~r~~~~~~~v~~-----~~~~~W~~~~l~~l~ 455 (456)
T TIGR02400 407 YDIDGMADAIARALTMPLEEREERHRAMMDKLRK-----NDVQRWREDFLSDLN 455 (456)
T ss_pred CCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhh-----CCHHHHHHHHHHHhh
Confidence 579999999999998543 55566666666544 266677777877663
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib |
| >PRK13932 stationary phase survival protein SurE; Provisional | Back alignment and domain information |
|---|
Probab=92.50 E-value=1.3 Score=39.98 Aligned_cols=115 Identities=17% Similarity=0.175 Sum_probs=61.4
Q ss_pred CCCEEEEEcCCCccCh-HHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCCC-CCCCcCCCCC
Q 012212 3 RQPHVLVIPYPAQGHV-APLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDG-LELQAADRED 80 (468)
Q Consensus 3 ~~~~Il~~~~~~~GH~-~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~ 80 (468)
++||||+.- -.|-. --+..|+++|.+.| +|+++.+...+....... ....++++..+... ....-.....
T Consensus 4 ~~M~ILltN--DDGi~a~Gi~aL~~~l~~~g-~V~VvAP~~~~Sg~g~ai-----t~~~pl~~~~~~~~~~~~~y~v~GT 75 (257)
T PRK13932 4 KKPHILVCN--DDGIEGEGIHVLAASMKKIG-RVTVVAPAEPHSGMSHAM-----TLGVPLRIKEYQKNNRFFGYTVSGT 75 (257)
T ss_pred CCCEEEEEC--CCCCCCHHHHHHHHHHHhCC-CEEEEcCCCCCCCCcccc-----cCCCCeEEEEEccCCCceEEEEcCc
Confidence 457988775 33332 34778899998888 799888876554433221 22255666655411 0000001112
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEec----------CCcc---cHHHHHHHhCCceEEEcc
Q 012212 81 PLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIAD----------VTVG---SALEVAESMGIARAAVVP 140 (468)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D----------~~~~---~~~~~A~~lgiP~v~~~~ 140 (468)
+.+... --+..+.. .+||+||+- .+.+ ++..-|..+|||.|.++.
T Consensus 76 PaDCV~-----------lal~~~~~----~~pDLVvSGIN~G~N~G~dv~ySGTVgAA~Ea~~~GiPsIA~S~ 133 (257)
T PRK13932 76 PVDCIK-----------VALSHILP----EKPDLIVSGINYGSNTATNTLYSGTVAAALEGAIQGIPSLAFSL 133 (257)
T ss_pred HHHHHH-----------HHHHhhcC----CCCCEEEECCcCCCCCCcCEecchhHHHHHHHHHcCCCeEEEEc
Confidence 222211 11222221 459999874 3333 333445677999999874
|
|
| >TIGR02919 accessory Sec system glycosyltransferase GtfB | Back alignment and domain information |
|---|
Probab=92.46 E-value=1.6 Score=43.15 Aligned_cols=137 Identities=15% Similarity=0.218 Sum_probs=84.8
Q ss_pred ccEEEEEecccccCCHHHHHHHHHHHHhCCC-CEEEEEcCCCCCCcccCCchhHHHHhCCCceEE-cccC-h-HHHhcCC
Q 012212 274 RSVVYVAFGSVAVLSQQQFAELALGLESLQK-PFLWVIRQDFMNGSRAKFPDGFIERVSNRGKIV-EWAP-Q-EKVLGHS 349 (468)
Q Consensus 274 ~~vv~vs~Gs~~~~~~~~~~~~~~a~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~-~~~p-~-~~ll~~~ 349 (468)
..++.+| ..+.++.+....+++|. .+-+...... + ..+ ..+ ++. +|+++. ++.+ . .+++..+
T Consensus 283 ~~~l~~t-------~s~~I~~i~~Lv~~lPd~~f~Iga~te~--s--~kL-~~L-~~y-~nvvly~~~~~~~l~~ly~~~ 348 (438)
T TIGR02919 283 KQALILT-------NSDQIEHLEEIVQALPDYHFHIAALTEM--S--SKL-MSL-DKY-DNVKLYPNITTQKIQELYQTC 348 (438)
T ss_pred ccEEEEC-------CHHHHHHHHHHHHhCCCcEEEEEecCcc--c--HHH-HHH-Hhc-CCcEEECCcChHHHHHHHHhc
Confidence 3467776 25566666666666554 4444222210 0 111 122 333 788877 7788 4 6799899
Q ss_pred CCCceeeccC--chhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeeccCCCccCHHHHHHHHHHHhcChH-HH
Q 012212 350 SVACFISHCG--WNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGIITRQEIQRKVLTLLKNDD-IR 426 (468)
Q Consensus 350 ~~~~~I~hGG--~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~~~-~r 426 (468)
++-+-|+||+ ..++.||+.+|+|++..=...- +...+ . . |-..+. -+.+++.++|.++|.|++ ++
T Consensus 349 dlyLdin~~e~~~~al~eA~~~G~pI~afd~t~~---~~~~i-~--~-g~l~~~-----~~~~~m~~~i~~lL~d~~~~~ 416 (438)
T TIGR02919 349 DIYLDINHGNEILNAVRRAFEYNLLILGFEETAH---NRDFI-A--S-ENIFEH-----NEVDQLISKLKDLLNDPNQFR 416 (438)
T ss_pred cEEEEccccccHHHHHHHHHHcCCcEEEEecccC---Ccccc-c--C-CceecC-----CCHHHHHHHHHHHhcCHHHHH
Confidence 9888889977 4899999999999998842211 11111 1 1 444444 358999999999999996 55
Q ss_pred HHHHHHHHHH
Q 012212 427 SNSLKLKEVA 436 (468)
Q Consensus 427 ~~a~~l~~~~ 436 (468)
++..+-++..
T Consensus 417 ~~~~~q~~~a 426 (438)
T TIGR02919 417 ELLEQQREHA 426 (438)
T ss_pred HHHHHHHHHh
Confidence 5555444443
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. |
| >PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A | Back alignment and domain information |
|---|
Probab=92.39 E-value=1.6 Score=36.49 Aligned_cols=29 Identities=31% Similarity=0.395 Sum_probs=23.6
Q ss_pred CccChHHHHHHHHHHHHCCCEEEEEECCc
Q 012212 14 AQGHVAPLMKLATKIAERAIKVTVVNTQF 42 (468)
Q Consensus 14 ~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~ 42 (468)
..|=-.-+..|+++|+++||+|++++...
T Consensus 11 ~GG~e~~~~~l~~~l~~~G~~v~v~~~~~ 39 (177)
T PF13439_consen 11 IGGAERVVLNLARALAKRGHEVTVVSPGV 39 (177)
T ss_dssp SSHHHHHHHHHHHHHHHTT-EEEEEESS-
T ss_pred CChHHHHHHHHHHHHHHCCCEEEEEEcCC
Confidence 44677789999999999999999998864
|
|
| >COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=91.50 E-value=9.9 Score=35.41 Aligned_cols=88 Identities=18% Similarity=0.353 Sum_probs=57.2
Q ss_pred CCceEEcccCh---HHHhcCCCCCceeec---cCch-hHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeeccCC
Q 012212 332 NRGKIVEWAPQ---EKVLGHSSVACFISH---CGWN-STMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADEN 404 (468)
Q Consensus 332 ~nv~~~~~~p~---~~ll~~~~~~~~I~h---GG~~-s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~~~ 404 (468)
+++.+.+++|+ ..++..+++ ++.- .|.| ++.||+++|+|+|.. +.......+... +.|. +...
T Consensus 257 ~~v~~~g~~~~~~~~~~~~~~~~--~v~ps~~e~~~~~~~Ea~a~g~pvi~~----~~~~~~e~~~~~-~~g~-~~~~-- 326 (381)
T COG0438 257 DNVKFLGYVPDEELAELLASADV--FVLPSLSEGFGLVLLEAMAAGTPVIAS----DVGGIPEVVEDG-ETGL-LVPP-- 326 (381)
T ss_pred CcEEEecccCHHHHHHHHHhCCE--EEeccccccchHHHHHHHhcCCcEEEC----CCCChHHHhcCC-CceE-ecCC--
Confidence 67777899983 335655544 6666 3554 469999999999776 444444444442 3466 3221
Q ss_pred CccCHHHHHHHHHHHhcChHHHHHHHH
Q 012212 405 GIITRQEIQRKVLTLLKNDDIRSNSLK 431 (468)
Q Consensus 405 ~~~t~~~l~~ai~~~l~~~~~r~~a~~ 431 (468)
...+.+.+++..++++.+.++....
T Consensus 327 --~~~~~~~~~i~~~~~~~~~~~~~~~ 351 (381)
T COG0438 327 --GDVEELADALEQLLEDPELREELGE 351 (381)
T ss_pred --CCHHHHHHHHHHHhcCHHHHHHHHH
Confidence 2589999999999998854444443
|
|
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=91.36 E-value=4.8 Score=43.38 Aligned_cols=92 Identities=13% Similarity=0.144 Sum_probs=57.1
Q ss_pred CCCceEEcccChH---HHhcCCCCCceeec----cCchhHHHhhhcCCceecccccc--chhhh--HHHH-HHHhhceeE
Q 012212 331 SNRGKIVEWAPQE---KVLGHSSVACFISH----CGWNSTMEGLSMGVPFLCWPYFS--DQYQN--RNYI-CEAWKIGLQ 398 (468)
Q Consensus 331 ~~nv~~~~~~p~~---~ll~~~~~~~~I~h----GG~~s~~eal~~GvP~v~~P~~~--DQ~~n--a~rv-~~~lG~g~~ 398 (468)
.++|++..+.+.. .+++.+++ ||.- |-..+.+||+++|+|.|+....+ |--.+ ...+ ... +-|..
T Consensus 836 ~drV~FlG~~de~lah~IYAaADI--FLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg-~NGfL 912 (977)
T PLN02939 836 NNNIRLILKYDEALSHSIYAASDM--FIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVEL-RNGFT 912 (977)
T ss_pred CCeEEEEeccCHHHHHHHHHhCCE--EEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCC-CceEE
Confidence 4578888877764 46755544 8853 22358999999999999875533 21111 1111 121 45766
Q ss_pred eeccCCCccCHHHHHHHHHHHhc----ChHHHHHHH
Q 012212 399 FFADENGIITRQEIQRKVLTLLK----NDDIRSNSL 430 (468)
Q Consensus 399 l~~~~~~~~t~~~l~~ai~~~l~----~~~~r~~a~ 430 (468)
++. .+++.+.++|.+++. |++.+++..
T Consensus 913 f~~-----~D~eaLa~AL~rAL~~~~~dpe~~~~L~ 943 (977)
T PLN02939 913 FLT-----PDEQGLNSALERAFNYYKRKPEVWKQLV 943 (977)
T ss_pred ecC-----CCHHHHHHHHHHHHHHhccCHHHHHHHH
Confidence 665 468889999988774 666554443
|
|
| >cd02067 B12-binding B12 binding domain (B12-BD) | Back alignment and domain information |
|---|
Probab=91.33 E-value=1.2 Score=35.02 Aligned_cols=44 Identities=14% Similarity=0.209 Sum_probs=37.3
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHH
Q 012212 6 HVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIA 49 (468)
Q Consensus 6 ~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~ 49 (468)
||++.+.++..|.....-++..|.++|++|+++......+.+.+
T Consensus 1 ~vl~~~~~~e~H~lG~~~~~~~l~~~G~~V~~lg~~~~~~~l~~ 44 (119)
T cd02067 1 KVVIATVGGDGHDIGKNIVARALRDAGFEVIDLGVDVPPEEIVE 44 (119)
T ss_pred CEEEEeeCCchhhHHHHHHHHHHHHCCCEEEECCCCCCHHHHHH
Confidence 58899999999999999999999999999999877655544444
|
This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins. |
| >COG0003 ArsA Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
Probab=91.02 E-value=3.4 Score=38.91 Aligned_cols=46 Identities=22% Similarity=0.143 Sum_probs=36.0
Q ss_pred CCEEEEEcC-CCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHH
Q 012212 4 QPHVLVIPY-PAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIA 49 (468)
Q Consensus 4 ~~~Il~~~~-~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~ 49 (468)
++||+|++. +|-|-..-..++|-.|++.|++|.++++++.+..-..
T Consensus 1 ~~riv~f~GKGGVGKTT~aaA~A~~lA~~g~kvLlvStDPAhsL~d~ 47 (322)
T COG0003 1 MTRIVFFTGKGGVGKTTIAAATAVKLAESGKKVLLVSTDPAHSLGDV 47 (322)
T ss_pred CcEEEEEecCCcccHHHHHHHHHHHHHHcCCcEEEEEeCCCCchHhh
Confidence 467876654 4559999999999999999999999988876654443
|
|
| >PRK02261 methylaspartate mutase subunit S; Provisional | Back alignment and domain information |
|---|
Probab=91.00 E-value=1.1 Score=36.29 Aligned_cols=50 Identities=14% Similarity=0.121 Sum_probs=43.1
Q ss_pred CCCCEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhh
Q 012212 2 SRQPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASL 51 (468)
Q Consensus 2 ~~~~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~ 51 (468)
+++.+|++.+.++.+|-.-..-++..|..+|++|+++......+.+.+..
T Consensus 1 ~~~~~vl~~~~~gD~H~lG~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a 50 (137)
T PRK02261 1 MKKKTVVLGVIGADCHAVGNKILDRALTEAGFEVINLGVMTSQEEFIDAA 50 (137)
T ss_pred CCCCEEEEEeCCCChhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHH
Confidence 35679999999999999999999999999999999999987766665543
|
|
| >TIGR00087 surE 5'/3'-nucleotidase SurE | Back alignment and domain information |
|---|
Probab=90.57 E-value=2.9 Score=37.67 Aligned_cols=112 Identities=20% Similarity=0.136 Sum_probs=59.9
Q ss_pred CEEEEEcCCCccCh-HHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCC--CCCCCcCCCCCH
Q 012212 5 PHVLVIPYPAQGHV-APLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPD--GLELQAADREDP 81 (468)
Q Consensus 5 ~~Il~~~~~~~GH~-~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~~~ 81 (468)
||||+.- -.|-. --+.+|+++|.+.| +|+++.+...+....... .....+++..++. +..... ....+
T Consensus 1 M~ILltN--DDGi~a~Gi~aL~~~l~~~g-~V~VvAP~~~~Sg~g~ai-----t~~~pl~~~~~~~~~~~~~~~-v~GTP 71 (244)
T TIGR00087 1 MKILLTN--DDGIHSPGIRALYQALKELG-EVTVVAPARQRSGTGHSL-----TLFEPLRVGQVKVKNGAHIYA-VDGTP 71 (244)
T ss_pred CeEEEEC--CCCCCCHhHHHHHHHHHhCC-CEEEEeCCCCccccccCc-----CCCCCeEEEEeccCCCccEEE-EcCcH
Confidence 4666553 33333 34778899999988 899999887665554322 2224566655542 110000 11122
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecC----------Ccc---cHHHHHHHhCCceEEEcc
Q 012212 82 LKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADV----------TVG---SALEVAESMGIARAAVVP 140 (468)
Q Consensus 82 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~----------~~~---~~~~~A~~lgiP~v~~~~ 140 (468)
.+....- +..+.. .+|||||+-. +++ ++..-|..+|||.+.++.
T Consensus 72 aDcv~~g-----------l~~l~~----~~pDLVvSGiN~G~N~g~~v~ySGTVgAA~ea~~~GipaiA~S~ 128 (244)
T TIGR00087 72 TDCVILG-----------INELMP----EVPDLVISGINAGENLGTDVTYSGTVGAAMEAAIHGVPAIAISL 128 (244)
T ss_pred HHHHHHH-----------HHHhcc----CCCCeEEeccccCCCCCccEecchhHHHHHHHHHcCCCeEEEEe
Confidence 2222211 122221 4589988643 333 334455677999999874
|
E. coli SurE is Recommended cutoffs are 15 for homology, 40 for probable orthology, and 200 for orthology with full-length homology. |
| >cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Probab=90.44 E-value=2.8 Score=41.92 Aligned_cols=104 Identities=16% Similarity=0.117 Sum_probs=61.7
Q ss_pred ceEE-cccChHHH---hcCCCCCceee---ccCc-hhHHHhhhcCCc----eeccccccchhhhHHHHHHHhhceeEeec
Q 012212 334 GKIV-EWAPQEKV---LGHSSVACFIS---HCGW-NSTMEGLSMGVP----FLCWPYFSDQYQNRNYICEAWKIGLQFFA 401 (468)
Q Consensus 334 v~~~-~~~p~~~l---l~~~~~~~~I~---hGG~-~s~~eal~~GvP----~v~~P~~~DQ~~na~rv~~~lG~g~~l~~ 401 (468)
+++. +++++.++ +..+++ +|. +-|+ .++.||+++|+| +|+.-..+ -+ +. ..-|+.++.
T Consensus 342 v~~~~g~v~~~el~~~y~~aDv--~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G----~~---~~-~~~g~lv~p 411 (460)
T cd03788 342 VRYLYRSLPREELAALYRAADV--ALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAG----AA---EE-LSGALLVNP 411 (460)
T ss_pred EEEEeCCCCHHHHHHHHHhccE--EEeCccccccCcccceeEEEecCCCceEEEecccc----ch---hh-cCCCEEECC
Confidence 4443 77887664 555554 774 3454 578999999999 54442221 11 11 134666665
Q ss_pred cCCCccCHHHHHHHHHHHhcChH--HHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHH
Q 012212 402 DENGIITRQEIQRKVLTLLKNDD--IRSNSLKLKEVARKSLLGGGSSFRNFESFISDI 457 (468)
Q Consensus 402 ~~~~~~t~~~l~~ai~~~l~~~~--~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 457 (468)
.+.++++++|.++|+++. .+++.++..+...+ -+...-+++++.++
T Consensus 412 -----~d~~~la~ai~~~l~~~~~e~~~~~~~~~~~v~~-----~~~~~w~~~~l~~l 459 (460)
T cd03788 412 -----YDIDEVADAIHRALTMPLEERRERHRKLREYVRT-----HDVQAWANSFLDDL 459 (460)
T ss_pred -----CCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh-----CCHHHHHHHHHHhh
Confidence 569999999999998653 33333333333333 25556666666554
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. |
| >COG4370 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=90.26 E-value=1 Score=40.96 Aligned_cols=95 Identities=14% Similarity=0.142 Sum_probs=61.7
Q ss_pred CCCceEE-cccChHHHhcCCCCCceeeccCchhHHHhhhcCCceeccccccchhhh--HHHHHHHhhceeEeeccCCCcc
Q 012212 331 SNRGKIV-EWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQN--RNYICEAWKIGLQFFADENGII 407 (468)
Q Consensus 331 ~~nv~~~-~~~p~~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~~~DQ~~n--a~rv~~~lG~g~~l~~~~~~~~ 407 (468)
++|-.+. .|-.+.++|.++++ .|--.|.- +-+++=-|||+|.+|-.+-|+.- |.|=.+-||..+.+-..
T Consensus 293 kdnc~l~lsqqsfadiLH~ada--algmAGTA-tEQavGLGkPvi~fPg~GPQy~pgFA~rQ~rLLG~sltlv~~----- 364 (412)
T COG4370 293 KDNCSLWLSQQSFADILHAADA--ALGMAGTA-TEQAVGLGKPVIGFPGQGPQYNPGFAERQQRLLGASLTLVRP----- 364 (412)
T ss_pred cCceEEEEeHHHHHHHHHHHHH--HHHhccch-HHHhhccCCceeecCCCCCCcChHHHHHHHHHhcceeeecCC-----
Confidence 3455555 66677777766655 44333322 33467889999999999999764 55545545777777553
Q ss_pred CHHHHHHHHHHHhcChHHHHHHHHHH
Q 012212 408 TRQEIQRKVLTLLKNDDIRSNSLKLK 433 (468)
Q Consensus 408 t~~~l~~ai~~~l~~~~~r~~a~~l~ 433 (468)
.++.-..+..++|.|+++.+.++.-+
T Consensus 365 ~aq~a~~~~q~ll~dp~r~~air~nG 390 (412)
T COG4370 365 EAQAAAQAVQELLGDPQRLTAIRHNG 390 (412)
T ss_pred chhhHHHHHHHHhcChHHHHHHHhcc
Confidence 23333344445999999887777444
|
|
| >COG2894 MinD Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
Probab=89.87 E-value=3.8 Score=35.78 Aligned_cols=39 Identities=15% Similarity=0.313 Sum_probs=33.7
Q ss_pred CCEEEEEcCC--CccChHHHHHHHHHHHHCCCEEEEEECCc
Q 012212 4 QPHVLVIPYP--AQGHVAPLMKLATKIAERAIKVTVVNTQF 42 (468)
Q Consensus 4 ~~~Il~~~~~--~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~ 42 (468)
|.+|++++++ +-|-..-...|+-+|+++|++|.++-.+-
T Consensus 1 M~~iIVvTSGKGGVGKTTttAnig~aLA~~GkKv~liD~Di 41 (272)
T COG2894 1 MARIIVVTSGKGGVGKTTTTANIGTALAQLGKKVVLIDFDI 41 (272)
T ss_pred CceEEEEecCCCCcCccchhHHHHHHHHHcCCeEEEEecCc
Confidence 5678888776 55999999999999999999999998763
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=89.35 E-value=3.4 Score=44.08 Aligned_cols=110 Identities=13% Similarity=0.047 Sum_probs=67.5
Q ss_pred EEcccChHH---HhcCCCCCceeec---cCc-hhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeeccCCCccC
Q 012212 336 IVEWAPQEK---VLGHSSVACFISH---CGW-NSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGIIT 408 (468)
Q Consensus 336 ~~~~~p~~~---ll~~~~~~~~I~h---GG~-~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~~~~~~t 408 (468)
+.+++++.+ ++..+++ |+.- -|+ .++.|++++|+|-...|...+--.-+ .+ +.-|+.++. .+
T Consensus 346 ~~~~~~~~~l~~ly~~aDv--~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~---~~-l~~~llv~P-----~d 414 (726)
T PRK14501 346 FYRSLPFEELVALYRAADV--ALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAA---AE-LAEALLVNP-----ND 414 (726)
T ss_pred EeCCCCHHHHHHHHHhccE--EEecccccccCcccceEEEEcCCCCceEEEecccchh---HH-hCcCeEECC-----CC
Confidence 347888866 4544544 7754 354 58899999977522222222211111 12 334777776 57
Q ss_pred HHHHHHHHHHHhcCh--HHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhhc
Q 012212 409 RQEIQRKVLTLLKND--DIRSNSLKLKEVARKSLLGGGSSFRNFESFISDIKMLI 461 (468)
Q Consensus 409 ~~~l~~ai~~~l~~~--~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 461 (468)
.++++++|.++|+++ +.+++.+++.+.... -+...-++++++.+++..
T Consensus 415 ~~~la~ai~~~l~~~~~e~~~r~~~~~~~v~~-----~~~~~w~~~~l~~l~~~~ 464 (726)
T PRK14501 415 IEGIAAAIKRALEMPEEEQRERMQAMQERLRR-----YDVHKWASDFLDELREAA 464 (726)
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh-----CCHHHHHHHHHHHHHHHH
Confidence 999999999999854 355555555555443 356777888888777653
|
|
| >PF02374 ArsA_ATPase: Anion-transporting ATPase; PDB: 2WOO_A 3IBG_B 3SJA_A 3H84_B 3SJD_A 3ZS9_A 3A37_A 2WOJ_A 3SJC_B 3A36_B | Back alignment and domain information |
|---|
Probab=89.08 E-value=1.1 Score=42.02 Aligned_cols=47 Identities=19% Similarity=0.073 Sum_probs=35.9
Q ss_pred CEEE-EEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhh
Q 012212 5 PHVL-VIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASL 51 (468)
Q Consensus 5 ~~Il-~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~ 51 (468)
||++ |.--+|.|-..-..++|-.++++|++|.++++++....-...+
T Consensus 1 ~r~~~~~GKGGVGKTT~aaA~A~~~A~~G~rtLlvS~Dpa~~L~d~l~ 48 (305)
T PF02374_consen 1 MRILFFGGKGGVGKTTVAAALALALARRGKRTLLVSTDPAHSLSDVLG 48 (305)
T ss_dssp -SEEEEEESTTSSHHHHHHHHHHHHHHTTS-EEEEESSTTTHHHHHHT
T ss_pred CeEEEEecCCCCCcHHHHHHHHHHHhhCCCCeeEeecCCCccHHHHhC
Confidence 3555 4455667999999999999999999999999998766544443
|
... |
| >PRK13935 stationary phase survival protein SurE; Provisional | Back alignment and domain information |
|---|
Probab=88.94 E-value=6.1 Score=35.66 Aligned_cols=42 Identities=19% Similarity=0.095 Sum_probs=27.2
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHH
Q 012212 5 PHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKII 48 (468)
Q Consensus 5 ~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~ 48 (468)
||||+.-==|. |---+.+|+++|.+ +|+|+++.+...+....
T Consensus 1 M~ILlTNDDGi-~a~Gi~aL~~~l~~-~~~V~VvAP~~~qSg~g 42 (253)
T PRK13935 1 MNILVTNDDGI-TSPGIIILAEYLSE-KHEVFVVAPDKERSATG 42 (253)
T ss_pred CeEEEECCCCC-CCHHHHHHHHHHHh-CCcEEEEccCCCCcccc
Confidence 46666642222 33347788999964 68999999877655443
|
|
| >PRK13933 stationary phase survival protein SurE; Provisional | Back alignment and domain information |
|---|
Probab=88.46 E-value=7.5 Score=35.14 Aligned_cols=41 Identities=12% Similarity=0.101 Sum_probs=26.4
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHH
Q 012212 5 PHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKI 47 (468)
Q Consensus 5 ~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i 47 (468)
||||+.-==|. |---+..|+++|.+ +|+|+++.+...+...
T Consensus 1 M~ILvtNDDGi-~apGl~aL~~~l~~-~~~V~VvAP~~~~Sg~ 41 (253)
T PRK13933 1 MNILLTNDDGI-NAEGINTLAELLSK-YHEVIIVAPENQRSAS 41 (253)
T ss_pred CeEEEEcCCCC-CChhHHHHHHHHHh-CCcEEEEccCCCCccc
Confidence 46776632222 22237788999965 6899999887765543
|
|
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=88.32 E-value=2.2 Score=45.82 Aligned_cols=105 Identities=12% Similarity=0.089 Sum_probs=67.1
Q ss_pred cccChHH---HhcCCCCCceeec---cCch-hHHHhhhcCCc---eeccccccchhhhHHHHHHHhh-ceeEeeccCCCc
Q 012212 338 EWAPQEK---VLGHSSVACFISH---CGWN-STMEGLSMGVP---FLCWPYFSDQYQNRNYICEAWK-IGLQFFADENGI 406 (468)
Q Consensus 338 ~~~p~~~---ll~~~~~~~~I~h---GG~~-s~~eal~~GvP---~v~~P~~~DQ~~na~rv~~~lG-~g~~l~~~~~~~ 406 (468)
.++|+.+ ++..+++ |+.- -|+| ++.|++++|+| +++++ |--..+.. +| -|+.++.
T Consensus 362 ~~v~~~el~aly~~ADv--fvvtSlrEGmnLv~lEamA~g~p~~gvlVlS---e~~G~~~~----l~~~allVnP----- 427 (797)
T PLN03063 362 CSVDFNYLCALYAITDV--MLVTSLRDGMNLVSYEFVACQKAKKGVLVLS---EFAGAGQS----LGAGALLVNP----- 427 (797)
T ss_pred CCCCHHHHHHHHHhCCE--EEeCccccccCcchhhHheeecCCCCCEEee---CCcCchhh----hcCCeEEECC-----
Confidence 3455544 5555555 7754 3775 77899999999 33433 22222221 34 5788877
Q ss_pred cCHHHHHHHHHHHhc-ChH-HHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhhc
Q 012212 407 ITRQEIQRKVLTLLK-NDD-IRSNSLKLKEVARKSLLGGGSSFRNFESFISDIKMLI 461 (468)
Q Consensus 407 ~t~~~l~~ai~~~l~-~~~-~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 461 (468)
.+.++++++|.++|+ +++ .+++.+++.+..... +...-.++|++++.+..
T Consensus 428 ~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~v~~~-----~~~~Wa~~fl~~l~~~~ 479 (797)
T PLN03063 428 WNITEVSSAIKEALNMSDEERETRHRHNFQYVKTH-----SAQKWADDFMSELNDII 479 (797)
T ss_pred CCHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhhC-----CHHHHHHHHHHHHHHHh
Confidence 679999999999998 544 444555566555552 55677778887776554
|
|
| >KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=88.05 E-value=24 Score=33.38 Aligned_cols=82 Identities=16% Similarity=0.304 Sum_probs=48.2
Q ss_pred CHHHHHHHHHHH-HhCC-CCEEEEEcCCCCCCcccCCchhHHHH--hCCCceEEcccChHH---HhcCCCCCceeeccC-
Q 012212 288 SQQQFAELALGL-ESLQ-KPFLWVIRQDFMNGSRAKFPDGFIER--VSNRGKIVEWAPQEK---VLGHSSVACFISHCG- 359 (468)
Q Consensus 288 ~~~~~~~~~~a~-~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~nv~~~~~~p~~~---ll~~~~~~~~I~hGG- 359 (468)
..+++..++..+ .+.+ .+|++.-.+. ....+ ++..|+ ..++|.+.+-+|+++ +|..-++ |++-.=
T Consensus 209 GiDll~~iIp~vc~~~p~vrfii~GDGP----k~i~l-ee~lEk~~l~~rV~~lG~v~h~~Vr~vl~~G~I--FlntSlT 281 (426)
T KOG1111|consen 209 GIDLLLEIIPSVCDKHPEVRFIIIGDGP----KRIDL-EEMLEKLFLQDRVVMLGTVPHDRVRDVLVRGDI--FLNTSLT 281 (426)
T ss_pred chHHHHHHHHHHHhcCCCeeEEEecCCc----ccchH-HHHHHHhhccCceEEecccchHHHHHHHhcCcE--EeccHHH
Confidence 345666666544 4333 3555444433 11112 233333 378899999999865 5655555 665443
Q ss_pred ---chhHHHhhhcCCceecc
Q 012212 360 ---WNSTMEGLSMGVPFLCW 376 (468)
Q Consensus 360 ---~~s~~eal~~GvP~v~~ 376 (468)
.-++.||..+|.|+|..
T Consensus 282 Eafc~~ivEAaScGL~VVsT 301 (426)
T KOG1111|consen 282 EAFCMVIVEAASCGLPVVST 301 (426)
T ss_pred HHHHHHHHHHHhCCCEEEEe
Confidence 23678999999999865
|
|
| >PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long) | Back alignment and domain information |
|---|
Probab=87.88 E-value=13 Score=35.01 Aligned_cols=82 Identities=17% Similarity=0.212 Sum_probs=62.5
Q ss_pred CCceEE-cccCh---HHHhcCCCCCceeec--cCchhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeeccCCC
Q 012212 332 NRGKIV-EWAPQ---EKVLGHSSVACFISH--CGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENG 405 (468)
Q Consensus 332 ~nv~~~-~~~p~---~~ll~~~~~~~~I~h--GG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~~~~ 405 (468)
+|+.+. +++|. .++|..+++..|.|. =|.|++.-.|+.|+|+++- .+----.-+++. |+=+-...++
T Consensus 245 ~~~~iL~e~mpf~eYl~lL~~cDl~if~~~RQQgiGnI~lLl~~G~~v~L~----~~np~~~~l~~~-~ipVlf~~d~-- 317 (360)
T PF07429_consen 245 ENFQILTEFMPFDEYLALLSRCDLGIFNHNRQQGIGNICLLLQLGKKVFLS----RDNPFWQDLKEQ-GIPVLFYGDE-- 317 (360)
T ss_pred cceeEhhhhCCHHHHHHHHHhCCEEEEeechhhhHhHHHHHHHcCCeEEEe----cCChHHHHHHhC-CCeEEecccc--
Confidence 577664 78875 569988888666664 4899999999999999876 444444555663 7777777677
Q ss_pred ccCHHHHHHHHHHHhc
Q 012212 406 IITRQEIQRKVLTLLK 421 (468)
Q Consensus 406 ~~t~~~l~~ai~~~l~ 421 (468)
++...|+++=+++.+
T Consensus 318 -L~~~~v~ea~rql~~ 332 (360)
T PF07429_consen 318 -LDEALVREAQRQLAN 332 (360)
T ss_pred -CCHHHHHHHHHHHhh
Confidence 999999999888875
|
This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall |
| >PRK13934 stationary phase survival protein SurE; Provisional | Back alignment and domain information |
|---|
Probab=87.87 E-value=8.3 Score=35.06 Aligned_cols=41 Identities=20% Similarity=0.122 Sum_probs=27.3
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHH
Q 012212 5 PHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKI 47 (468)
Q Consensus 5 ~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i 47 (468)
||||+.-==|. |---+..|+++|.+.| +|+++.+...+...
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~al~~~g-~V~VvAP~~eqSg~ 41 (266)
T PRK13934 1 MKILVTNDDGV-HSPGLRLLYEFVSPLG-EVDVVAPETPKSAT 41 (266)
T ss_pred CeEEEEcCCCC-CCHHHHHHHHHHHhCC-cEEEEccCCCCccc
Confidence 46666542222 3355788999998887 79988887655444
|
|
| >PRK02797 4-alpha-L-fucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=87.74 E-value=13 Score=34.54 Aligned_cols=81 Identities=17% Similarity=0.213 Sum_probs=58.9
Q ss_pred CCceEE-cccC---hHHHhcCCCCCceeec--cCchhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeeccCCC
Q 012212 332 NRGKIV-EWAP---QEKVLGHSSVACFISH--CGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENG 405 (468)
Q Consensus 332 ~nv~~~-~~~p---~~~ll~~~~~~~~I~h--GG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~~~~ 405 (468)
+|+.+. +++| |.++|+.+++..|+|+ =|.|++.-.+++|||+++-- +=+.+.. +.+ .|+-+-.+.++
T Consensus 206 ~~~~~L~e~l~f~eYl~lL~~~Dl~~f~~~RQQgiGnl~lLi~~G~~v~l~r---~n~fwqd-l~e-~gv~Vlf~~d~-- 278 (322)
T PRK02797 206 ENFQILTEKLPFDDYLALLRQCDLGYFIFARQQGIGTLCLLIQLGKPVVLSR---DNPFWQD-LTE-QGLPVLFTGDD-- 278 (322)
T ss_pred ccEEehhhhCCHHHHHHHHHhCCEEEEeechhhHHhHHHHHHHCCCcEEEec---CCchHHH-HHh-CCCeEEecCCc--
Confidence 788875 7777 5669989998777776 47899999999999999873 2233333 344 37877667777
Q ss_pred ccCHHHHHHHHHHHh
Q 012212 406 IITRQEIQRKVLTLL 420 (468)
Q Consensus 406 ~~t~~~l~~ai~~~l 420 (468)
++...+.++=+++.
T Consensus 279 -L~~~~v~e~~rql~ 292 (322)
T PRK02797 279 -LDEDIVREAQRQLA 292 (322)
T ss_pred -ccHHHHHHHHHHHH
Confidence 88888877655443
|
|
| >PF02951 GSH-S_N: Prokaryotic glutathione synthetase, N-terminal domain; InterPro: IPR004215 Prokaryotic glutathione synthetase 6 | Back alignment and domain information |
|---|
Probab=87.51 E-value=1.1 Score=35.21 Aligned_cols=40 Identities=10% Similarity=0.058 Sum_probs=28.1
Q ss_pred CEEEEEcCCCcc---ChHHHHHHHHHHHHCCCEEEEEECCcch
Q 012212 5 PHVLVIPYPAQG---HVAPLMKLATKIAERAIKVTVVNTQFIH 44 (468)
Q Consensus 5 ~~Il~~~~~~~G---H~~p~~~LA~~L~~rGH~Vt~~~~~~~~ 44 (468)
|||+|+.-|-.+ .-.-..+|+.+-++|||+|.++......
T Consensus 1 Mki~fvmDpi~~i~~~kDTT~alm~eAq~RGhev~~~~~~dL~ 43 (119)
T PF02951_consen 1 MKIAFVMDPIESIKPYKDTTFALMLEAQRRGHEVFYYEPGDLS 43 (119)
T ss_dssp -EEEEEES-GGG--TTT-HHHHHHHHHHHTT-EEEEE-GGGEE
T ss_pred CeEEEEeCCHHHCCCCCChHHHHHHHHHHCCCEEEEEEcCcEE
Confidence 688888666444 4457889999999999999999987654
|
3.2.3 from EC (glutathione synthase) catalyses the conversion of gamma-L-glutamyl-L-cysteine and glycine to orthophosphate and glutathione in the presence of ATP. This is the second step in glutathione biosynthesis. The enzyme is inhibited by 7,8-dihydrofolate, methotrexate and trimethoprim. This domain is the N terminus of the enzyme.; GO: 0004363 glutathione synthase activity, 0006750 glutathione biosynthetic process; PDB: 1GLV_A 1GSA_A 1GSH_A 2GLT_A. |
| >TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family | Back alignment and domain information |
|---|
Probab=86.83 E-value=4.3 Score=35.31 Aligned_cols=105 Identities=10% Similarity=0.114 Sum_probs=68.1
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCCCCCCCcCCCCCHHH
Q 012212 4 QPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDGLELQAADREDPLK 83 (468)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 83 (468)
..||++.+.++..|-....-++..|..+|++|+++......+.+.+...+ .+.+++.+.--..
T Consensus 84 ~~~vv~~t~~gd~H~lG~~~v~~~l~~~G~~vi~LG~~vp~e~~v~~~~~------~~pd~v~lS~~~~----------- 146 (197)
T TIGR02370 84 LGKVVCGVAEGDVHDIGKNIVVTMLRANGFDVIDLGRDVPIDTVVEKVKK------EKPLMLTGSALMT----------- 146 (197)
T ss_pred CCeEEEEeCCCchhHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHHHHH------cCCCEEEEccccc-----------
Confidence 46999999999999999999999999999999999998776666554432 3333443332110
Q ss_pred HHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCcccHHHHHHHhCCc
Q 012212 84 LGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVGSALEVAESMGIA 134 (468)
Q Consensus 84 ~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~lgiP 134 (468)
.....++++++.+++.+...++-++|.-... ....|+.+|.=
T Consensus 147 -------~~~~~~~~~i~~l~~~~~~~~v~i~vGG~~~--~~~~~~~~gad 188 (197)
T TIGR02370 147 -------TTMYGQKDINDKLKEEGYRDSVKFMVGGAPV--TQDWADKIGAD 188 (197)
T ss_pred -------cCHHHHHHHHHHHHHcCCCCCCEEEEEChhc--CHHHHHHhCCc
Confidence 0112245566666665422345566655433 34567777654
|
This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere. |
| >cd00561 CobA_CobO_BtuR ATP:corrinoid adenosyltransferase BtuR/CobO/CobP | Back alignment and domain information |
|---|
Probab=86.07 E-value=19 Score=30.05 Aligned_cols=99 Identities=16% Similarity=0.082 Sum_probs=59.9
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHHCCCEEEE---EECC--cchHHHHHhhhhhccCCCCCeEEEEcCCCCCCCcCCCC
Q 012212 5 PHVLVIPYPAQGHVAPLMKLATKIAERAIKVTV---VNTQ--FIHKKIIASLQEKAEDSSSQIKLVTIPDGLELQAADRE 79 (468)
Q Consensus 5 ~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~---~~~~--~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 79 (468)
.-|.+++.++.|-....+++|-..+.+|++|.| +-+. ..+..+.+. .+++.+.....+..... .
T Consensus 3 G~i~vy~g~G~Gkt~~a~g~~~ra~~~g~~v~~vQFlKg~~~~gE~~~l~~--------l~~v~~~~~g~~~~~~~---~ 71 (159)
T cd00561 3 GLIQVYTGNGKGKTTAALGLALRALGHGYRVGVVQFLKGGWKYGELKALER--------LPNIEIHRMGRGFFWTT---E 71 (159)
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEEeCCCCccCHHHHHHh--------CCCcEEEECCCCCccCC---C
Confidence 457788889999999999999999999999999 5553 112222221 15677777665433221 1
Q ss_pred CHHHHHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCcc
Q 012212 80 DPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVG 122 (468)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~ 122 (468)
+..... ...+..++...+.+.. ..+|+||.|-...
T Consensus 72 ~~~~~~----~~a~~~~~~a~~~~~~----~~~dLlVLDEi~~ 106 (159)
T cd00561 72 NDEEDI----AAAAEGWAFAKEAIAS----GEYDLVILDEINY 106 (159)
T ss_pred ChHHHH----HHHHHHHHHHHHHHhc----CCCCEEEEechHh
Confidence 111111 2223333333333333 5699999997543
|
This family consists of the BtuR, CobO, CobP proteins all of which are Cob(I)alamin (vitamin B12) adenosyltransferase, which is involved in cobalamin (vitamin B12) biosynthesis. This enzyme is a homodimer, which catalyzes the adenosylation reaction: ATP + cob(I)alamin + H2O <= phosphate + diphosphate + adenosylcobalamin. |
| >PRK06849 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=85.91 E-value=8.1 Score=37.72 Aligned_cols=39 Identities=15% Similarity=0.209 Sum_probs=31.6
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcc
Q 012212 1 MSRQPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFI 43 (468)
Q Consensus 1 m~~~~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~ 43 (468)
|+++++||++. +.....+.+|+.|.++||+|+++.....
T Consensus 1 ~~~~~~VLI~G----~~~~~~l~iar~l~~~G~~Vi~~d~~~~ 39 (389)
T PRK06849 1 MNTKKTVLITG----ARAPAALELARLFHNAGHTVILADSLKY 39 (389)
T ss_pred CCCCCEEEEeC----CCcHHHHHHHHHHHHCCCEEEEEeCCch
Confidence 77889999884 2333688999999999999999988653
|
|
| >PRK05986 cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase; Validated | Back alignment and domain information |
|---|
Probab=85.77 E-value=22 Score=30.62 Aligned_cols=105 Identities=13% Similarity=0.100 Sum_probs=62.8
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCCCCCCCcCCCCCHHH
Q 012212 4 QPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDGLELQAADREDPLK 83 (468)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 83 (468)
...|.+++..+.|-....+++|-..+.+|++|.++---.... .+|....-....++.+.....++.... .+...
T Consensus 22 ~g~v~v~~g~GkGKtt~a~g~a~ra~g~G~~V~ivQFlKg~~---~~GE~~~l~~l~~v~~~~~g~~~~~~~---~~~~e 95 (191)
T PRK05986 22 KGLLIVHTGNGKGKSTAAFGMALRAVGHGKKVGVVQFIKGAW---STGERNLLEFGGGVEFHVMGTGFTWET---QDRER 95 (191)
T ss_pred CCeEEEECCCCCChHHHHHHHHHHHHHCCCeEEEEEEecCCC---ccCHHHHHhcCCCcEEEECCCCCcccC---CCcHH
Confidence 467889999999999999999999999999999875432210 001000001114688887776543321 11111
Q ss_pred HHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCcc
Q 012212 84 LGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVG 122 (468)
Q Consensus 84 ~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~ 122 (468)
-....+..+....+.+.+ .++|+||-|-...
T Consensus 96 ----~~~~~~~~~~~a~~~l~~----~~ydlvVLDEi~~ 126 (191)
T PRK05986 96 ----DIAAAREGWEEAKRMLAD----ESYDLVVLDELTY 126 (191)
T ss_pred ----HHHHHHHHHHHHHHHHhC----CCCCEEEEehhhH
Confidence 112233334444444443 5699999997543
|
|
| >PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ] | Back alignment and domain information |
|---|
Probab=85.57 E-value=12 Score=32.47 Aligned_cols=40 Identities=15% Similarity=0.276 Sum_probs=33.0
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchH
Q 012212 6 HVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHK 45 (468)
Q Consensus 6 ~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~ 45 (468)
-|+|+-..|-|-..-..+||..+..+|++|.++|.+.++-
T Consensus 3 vi~lvGptGvGKTTt~aKLAa~~~~~~~~v~lis~D~~R~ 42 (196)
T PF00448_consen 3 VIALVGPTGVGKTTTIAKLAARLKLKGKKVALISADTYRI 42 (196)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHHHTT--EEEEEESTSST
T ss_pred EEEEECCCCCchHhHHHHHHHHHhhccccceeecCCCCCc
Confidence 3567777788999999999999999999999999998753
|
SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A .... |
| >PRK00346 surE 5'(3')-nucleotidase/polyphosphatase; Provisional | Back alignment and domain information |
|---|
Probab=84.91 E-value=14 Score=33.48 Aligned_cols=111 Identities=19% Similarity=0.174 Sum_probs=58.9
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCCCCCCCcCCCCCHHHH
Q 012212 5 PHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDGLELQAADREDPLKL 84 (468)
Q Consensus 5 ~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 84 (468)
||||+.-==|. |.--+..|+++|.+. |+|+++.+...+....... ....++++..+..+. -. ....+.+.
T Consensus 1 M~ILlTNDDGi-~a~Gi~aL~~~l~~~-~~V~VvAP~~~qSg~g~ai-----t~~~pl~~~~~~~~~--~~-v~GTPaDc 70 (250)
T PRK00346 1 MRILLTNDDGI-HAPGIRALAEALREL-ADVTVVAPDRERSGASHSL-----TLTRPLRVEKVDNGF--YA-VDGTPTDC 70 (250)
T ss_pred CeEEEECCCCC-CChhHHHHHHHHHhC-CCEEEEeCCCCCcCCcccc-----cCCCCeEEEEecCCe--EE-ECCcHHHH
Confidence 46666532222 233477899999988 7999999877655443321 122455555543210 00 11122222
Q ss_pred HHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEec----------CCcc---cHHHHHHHhCCceEEEcc
Q 012212 85 GESVARAMRGCLRDLIEKINQSNDCEPIRCVIAD----------VTVG---SALEVAESMGIARAAVVP 140 (468)
Q Consensus 85 ~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D----------~~~~---~~~~~A~~lgiP~v~~~~ 140 (468)
... -+..+.. .+||+||+- .+.+ ++..-|...|||.+.++.
T Consensus 71 V~~-----------gl~~l~~----~~pDlVvSGIN~G~N~g~~v~ySGTVgAA~ea~~~GiPaiA~S~ 124 (250)
T PRK00346 71 VHL-----------ALNGLLD----PKPDLVVSGINHGANLGDDVLYSGTVAAAMEGALLGIPAIAVSL 124 (250)
T ss_pred HHH-----------HHHhhcc----CCCCEEEeCCccCCCCCCCeeccHHHHHHHHHHhcCCCeEEEec
Confidence 111 1222221 359999874 3333 334455677999999874
|
|
| >COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=84.66 E-value=12 Score=32.49 Aligned_cols=38 Identities=18% Similarity=0.400 Sum_probs=33.3
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECC
Q 012212 4 QPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQ 41 (468)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~ 41 (468)
|+=|+|...|+.|-......||++|.+++|+|..++.+
T Consensus 1 mpLiIlTGyPgsGKTtfakeLak~L~~~i~~vi~l~kd 38 (261)
T COG4088 1 MPLIILTGYPGSGKTTFAKELAKELRQEIWRVIHLEKD 38 (261)
T ss_pred CceEEEecCCCCCchHHHHHHHHHHHHhhhhccccchh
Confidence 34577888999999999999999999999999887764
|
|
| >PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases | Back alignment and domain information |
|---|
Probab=84.27 E-value=26 Score=30.07 Aligned_cols=58 Identities=24% Similarity=0.260 Sum_probs=37.7
Q ss_pred CCEEEEEc---CCC-ccCh-HHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCC
Q 012212 4 QPHVLVIP---YPA-QGHV-APLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPD 69 (468)
Q Consensus 4 ~~~Il~~~---~~~-~GH~-~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~ 69 (468)
|.||.++. .|+ +|=+ .-.-.|+..|+++||+||+++.......-. ....+++...+|.
T Consensus 1 mkkIaIiGtrGIPa~YGGfET~ve~L~~~l~~~g~~v~Vyc~~~~~~~~~--------~~y~gv~l~~i~~ 63 (185)
T PF09314_consen 1 MKKIAIIGTRGIPARYGGFETFVEELAPRLVSKGIDVTVYCRSDYYPYKE--------FEYNGVRLVYIPA 63 (185)
T ss_pred CceEEEEeCCCCCcccCcHHHHHHHHHHHHhcCCceEEEEEccCCCCCCC--------cccCCeEEEEeCC
Confidence 45777763 233 2333 345677888888999999999876543222 3337788888874
|
|
| >COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=84.03 E-value=10 Score=36.88 Aligned_cols=44 Identities=18% Similarity=0.242 Sum_probs=38.5
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHH
Q 012212 4 QPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKI 47 (468)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i 47 (468)
+..|+++-.=|.|-..-+-.||+.|.++|+.|.+++.+.++...
T Consensus 100 P~vImmvGLQGsGKTTt~~KLA~~lkk~~~kvllVaaD~~RpAA 143 (451)
T COG0541 100 PTVILMVGLQGSGKTTTAGKLAKYLKKKGKKVLLVAADTYRPAA 143 (451)
T ss_pred CeEEEEEeccCCChHhHHHHHHHHHHHcCCceEEEecccCChHH
Confidence 45577888889999999999999999999999999999887544
|
|
| >COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=83.72 E-value=15 Score=34.45 Aligned_cols=43 Identities=14% Similarity=0.179 Sum_probs=38.3
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHH
Q 012212 5 PHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKI 47 (468)
Q Consensus 5 ~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i 47 (468)
--|||+-.-|.|-..-...||..|.+.|+.|.++..+.|+...
T Consensus 140 ~Vil~vGVNG~GKTTTIaKLA~~l~~~g~~VllaA~DTFRAaA 182 (340)
T COG0552 140 FVILFVGVNGVGKTTTIAKLAKYLKQQGKSVLLAAGDTFRAAA 182 (340)
T ss_pred EEEEEEecCCCchHhHHHHHHHHHHHCCCeEEEEecchHHHHH
Confidence 3467888899999999999999999999999999999997543
|
|
| >PRK12342 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=83.33 E-value=25 Score=31.92 Aligned_cols=30 Identities=13% Similarity=0.144 Sum_probs=24.6
Q ss_pred CceEEEecCCcc------cHHHHHHHhCCceEEEcc
Q 012212 111 PIRCVIADVTVG------SALEVAESMGIARAAVVP 140 (468)
Q Consensus 111 ~pDlvi~D~~~~------~~~~~A~~lgiP~v~~~~ 140 (468)
.||||++...+. -+..+|+.||+|++.+..
T Consensus 109 ~~DLVl~G~~s~D~~tgqvg~~lA~~Lg~P~vt~v~ 144 (254)
T PRK12342 109 GFDLLLFGEGSGDLYAQQVGLLLGELLQLPVINAVS 144 (254)
T ss_pred CCCEEEEcCCcccCCCCCHHHHHHHHhCCCcEeeEE
Confidence 399999976555 378999999999998664
|
|
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=83.11 E-value=6.7 Score=35.67 Aligned_cols=35 Identities=17% Similarity=0.124 Sum_probs=25.9
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcch
Q 012212 5 PHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIH 44 (468)
Q Consensus 5 ~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~ 44 (468)
|||+++. +.|. -..||+.|.++||+|+..+.....
T Consensus 1 m~ILvlG--GT~e---gr~la~~L~~~g~~v~~s~~t~~~ 35 (256)
T TIGR00715 1 MTVLLMG--GTVD---SRAIAKGLIAQGIEILVTVTTSEG 35 (256)
T ss_pred CeEEEEe--chHH---HHHHHHHHHhCCCeEEEEEccCCc
Confidence 4677764 3342 568999999999999988876543
|
This enzyme was found to be a monomer by gel filtration. |
| >PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT | Back alignment and domain information |
|---|
Probab=83.01 E-value=9.8 Score=34.91 Aligned_cols=43 Identities=16% Similarity=0.146 Sum_probs=33.1
Q ss_pred CCceE-EcccChHHHhcCCCCCceeeccCchhHHHhhhcCCceeccc
Q 012212 332 NRGKI-VEWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWP 377 (468)
Q Consensus 332 ~nv~~-~~~~p~~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P 377 (468)
.++.+ .+-.+-.+++.+++. |||-.+. +-.||+.+|+|+++++
T Consensus 182 ~~~~~~~~~~~~~~Ll~~s~~--VvtinSt-vGlEAll~gkpVi~~G 225 (269)
T PF05159_consen 182 PNVVIIDDDVNLYELLEQSDA--VVTINST-VGLEALLHGKPVIVFG 225 (269)
T ss_pred CCeEEECCCCCHHHHHHhCCE--EEEECCH-HHHHHHHcCCceEEec
Confidence 34444 477888899977765 8888554 6789999999999986
|
Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport |
| >PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria | Back alignment and domain information |
|---|
Probab=83.01 E-value=1.9 Score=41.82 Aligned_cols=113 Identities=14% Similarity=0.178 Sum_probs=65.7
Q ss_pred CCCceEE-cccChHHHhcCCCCCceeeccCchhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeeccC--CCcc
Q 012212 331 SNRGKIV-EWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADE--NGII 407 (468)
Q Consensus 331 ~~nv~~~-~~~p~~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~~--~~~~ 407 (468)
.++++.+ +..+..++|..+++ +||=- ...+.|.++.++|+|....-.|+.... . |.-......- .-.-
T Consensus 251 ~~~i~~~~~~~~~~~ll~~aDi--LITDy-SSi~fD~~~l~KPiify~~D~~~Y~~~-----r-g~~~~~~~~~pg~~~~ 321 (369)
T PF04464_consen 251 NSNIIFVSDNEDIYDLLAAADI--LITDY-SSIIFDFLLLNKPIIFYQPDLEEYEKE-----R-GFYFDYEEDLPGPIVY 321 (369)
T ss_dssp TTTEEE-TT-S-HHHHHHT-SE--EEESS--THHHHHGGGT--EEEE-TTTTTTTTT-----S-SBSS-TTTSSSS-EES
T ss_pred CCcEEECCCCCCHHHHHHhcCE--EEEec-hhHHHHHHHhCCCEEEEeccHHHHhhc-----c-CCCCchHhhCCCceeC
Confidence 4666766 55567889966655 99986 457899999999999887666555222 1 3332221110 0125
Q ss_pred CHHHHHHHHHHHhcChH-HHHHHHHHHHHHHHHhcCCCchHHHHHHH
Q 012212 408 TRQEIQRKVLTLLKNDD-IRSNSLKLKEVARKSLLGGGSSFRNFESF 453 (468)
Q Consensus 408 t~~~l~~ai~~~l~~~~-~r~~a~~l~~~~~~~~~~~g~~~~~~~~~ 453 (468)
+.++|.++|..++++.. ++++-++..+++.. ..+|.++.+-++.+
T Consensus 322 ~~~eL~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~Dg~s~eri~~~I 367 (369)
T PF04464_consen 322 NFEELIEAIENIIENPDEYKEKREKFRDKFFK-YNDGNSSERIVNYI 367 (369)
T ss_dssp SHHHHHHHHTTHHHHHHHTHHHHHHHHHHHST-T--S-HHHHHHHHH
T ss_pred CHHHHHHHHHhhhhCCHHHHHHHHHHHHHhCC-CCCchHHHHHHHHH
Confidence 68999999999887665 66777777777766 34455554444443
|
They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D. |
| >COG1703 ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=82.93 E-value=6.5 Score=36.16 Aligned_cols=118 Identities=14% Similarity=0.204 Sum_probs=69.0
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcC--CCCCCCcC-CCCCH
Q 012212 5 PHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIP--DGLELQAA-DREDP 81 (468)
Q Consensus 5 ~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~-~~~~~ 81 (468)
..|.+.-.|+-|--.-.-+|.+.|.++||+|-++.-++...+-..+ ..++.++...+. ++..-... .....
T Consensus 52 ~viGITG~PGaGKSTli~~L~~~l~~~G~rVaVlAVDPSSp~TGGs------iLGDRiRM~~~~~~~~vFiRs~~srG~l 125 (323)
T COG1703 52 HVIGITGVPGAGKSTLIEALGRELRERGHRVAVLAVDPSSPFTGGS------ILGDRIRMQRLAVDPGVFIRSSPSRGTL 125 (323)
T ss_pred cEEEecCCCCCchHHHHHHHHHHHHHCCcEEEEEEECCCCCCCCcc------ccccHhhHHhhccCCCeEEeecCCCccc
Confidence 4566888999999999999999999999999999988765443221 111222222211 11100000 11111
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCcc--cHHHHHHHhCCceEEEcc
Q 012212 82 LKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVG--SALEVAESMGIARAAVVP 140 (468)
Q Consensus 82 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~--~~~~~A~~lgiP~v~~~~ 140 (468)
.. + .....+++..+... .+|+||++.... .=..+++...+=.++..+
T Consensus 126 GG----l----S~at~~~i~~ldAa----G~DvIIVETVGvGQsev~I~~~aDt~~~v~~p 174 (323)
T COG1703 126 GG----L----SRATREAIKLLDAA----GYDVIIVETVGVGQSEVDIANMADTFLVVMIP 174 (323)
T ss_pred hh----h----hHHHHHHHHHHHhc----CCCEEEEEecCCCcchhHHhhhcceEEEEecC
Confidence 11 1 12234455555554 499999998766 334577777766655544
|
|
| >COG0496 SurE Predicted acid phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=82.91 E-value=5.8 Score=35.58 Aligned_cols=41 Identities=22% Similarity=0.262 Sum_probs=28.6
Q ss_pred CEEEEEcCCCcc-ChHHHHHHHHHHHHCCCEEEEEECCcchHHHH
Q 012212 5 PHVLVIPYPAQG-HVAPLMKLATKIAERAIKVTVVNTQFIHKKII 48 (468)
Q Consensus 5 ~~Il~~~~~~~G-H~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~ 48 (468)
||||+.- -.| |---+.+|+++|. .+++|+++.+...+....
T Consensus 1 mrILlTN--DDGi~a~Gi~aL~~al~-~~~dV~VVAP~~~qSg~s 42 (252)
T COG0496 1 MRILLTN--DDGIHAPGIRALARALR-EGADVTVVAPDREQSGAS 42 (252)
T ss_pred CeEEEec--CCccCCHHHHHHHHHHh-hCCCEEEEccCCCCcccc
Confidence 4566553 222 4444778899998 999999999987765553
|
|
| >PRK05632 phosphate acetyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=82.79 E-value=18 Score=38.21 Aligned_cols=103 Identities=15% Similarity=0.215 Sum_probs=61.2
Q ss_pred EEEEEcCC-CccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCCCCCCCcCCCCCHHHH
Q 012212 6 HVLVIPYP-AQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDGLELQAADREDPLKL 84 (468)
Q Consensus 6 ~Il~~~~~-~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 84 (468)
.|++.+.. ..|-..-.++|++.|.++|++|-++-+-... | . .....
T Consensus 4 ~l~I~~T~t~~GKT~vslgL~~~L~~~G~~Vg~fKPi~~~-----------------------p--~--------~~~~~ 50 (684)
T PRK05632 4 SIYLAPTGTGVGLTSVSLGLMRALERKGVKVGFFKPIAQP-----------------------P--L--------TMSEV 50 (684)
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHhCCCeEEEeCCcccC-----------------------C--C--------CHHHH
Confidence 56655444 4599999999999999999999998752210 0 0 00000
Q ss_pred HHHHHH-HhhHHHHHHHHHHhhCCCCCCceEEEecCCccc---------HHHHHHHhCCceEEEcccch
Q 012212 85 GESVAR-AMRGCLRDLIEKINQSNDCEPIRCVIADVTVGS---------ALEVAESMGIARAAVVPFGP 143 (468)
Q Consensus 85 ~~~~~~-~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~~---------~~~~A~~lgiP~v~~~~~~~ 143 (468)
...+.. .....++.+++.+.... .+.|+||+|...+. ...+|+.++.|++.+...-.
T Consensus 51 ~~~~~~~~~~~~~~~I~~~~~~l~--~~~D~VLIEGa~~~~~~~~~~~~na~iA~~L~~pVILV~~~~~ 117 (684)
T PRK05632 51 EALLASGQLDELLEEIVARYHALA--KDCDVVLVEGLDPTRKHPFEFSLNAEIAKNLGAEVVLVSSGGN 117 (684)
T ss_pred HHHHhccCChHHHHHHHHHHHHhc--cCCCEEEEeCcCCCCcCcccCchHHHHHHHhCCCEEEEECCCC
Confidence 000000 01122233333332221 45899998886531 35679999999999987643
|
|
| >COG4394 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=82.71 E-value=38 Score=30.92 Aligned_cols=29 Identities=17% Similarity=0.227 Sum_probs=26.0
Q ss_pred CccChHHHHHHHHHHH-HCCCEEEEEECCc
Q 012212 14 AQGHVAPLMKLATKIA-ERAIKVTVVNTQF 42 (468)
Q Consensus 14 ~~GH~~p~~~LA~~L~-~rGH~Vt~~~~~~ 42 (468)
-+|++-....||+.|+ ++||.|.+-+.+.
T Consensus 13 NyGDIGV~wRLARql~re~G~~VrLWvDd~ 42 (370)
T COG4394 13 NYGDIGVAWRLARQLKREHGWQVRLWVDDK 42 (370)
T ss_pred ccchhHHHHHHHHHHHHHhCceeeeecCCH
Confidence 5799999999999999 5799999999865
|
|
| >PF02441 Flavoprotein: Flavoprotein; InterPro: IPR003382 This entry contains a diverse range of flavoprotein enzymes, including epidermin biosynthesis protein, EpiD, which has been shown to be a flavoprotein that binds FMN [] | Back alignment and domain information |
|---|
Probab=82.54 E-value=2.2 Score=34.24 Aligned_cols=45 Identities=11% Similarity=0.064 Sum_probs=36.1
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHh
Q 012212 5 PHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIAS 50 (468)
Q Consensus 5 ~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~ 50 (468)
+||++...++.+=+. ...+.++|.++||+|.++.++...+.+...
T Consensus 1 k~i~l~vtGs~~~~~-~~~~l~~L~~~g~~v~vv~S~~A~~~~~~~ 45 (129)
T PF02441_consen 1 KRILLGVTGSIAAYK-APDLLRRLKRAGWEVRVVLSPSAERFVTPE 45 (129)
T ss_dssp -EEEEEE-SSGGGGG-HHHHHHHHHTTTSEEEEEESHHHHHHSHHH
T ss_pred CEEEEEEECHHHHHH-HHHHHHHHhhCCCEEEEEECCcHHHHhhhh
Confidence 578877777665555 999999999999999999998888777764
|
This enzyme catalyzes the removal of two reducing equivalents from the cysteine residue of the C-terminal meso-lanthionine of epidermin to form a --C==C-- double bond. This family also includes the B chain of dipicolinate synthase a small polar molecule that accumulates to high concentrations in bacterial endospores, and is thought to play a role in spore heat resistance, or the maintenance of heat resistance []. Dipicolinate synthase catalyses the formation of dipicolinic acid from dihydroxydipicolinic acid. This family also includes phenylacrylic acid decarboxylase 4.1.1 from EC [].; GO: 0003824 catalytic activity; PDB: 3QJG_L 1G63_G 1G5Q_L 1P3Y_1 1QZU_A 1E20_A 1MVN_A 1MVL_A 3ZQU_A 2EJB_A .... |
| >PF07015 VirC1: VirC1 protein; InterPro: IPR009744 This family consists of several bacterial VirC1 proteins | Back alignment and domain information |
|---|
Probab=82.48 E-value=5.4 Score=35.33 Aligned_cols=45 Identities=18% Similarity=0.253 Sum_probs=36.7
Q ss_pred CEEEEEc-CCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHH
Q 012212 5 PHVLVIP-YPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIA 49 (468)
Q Consensus 5 ~~Il~~~-~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~ 49 (468)
.-|.|.+ -||-|-..-.+.||.+|+++|-.|+++=.++++.....
T Consensus 2 ~vItf~s~KGGaGKTT~~~~LAs~la~~G~~V~lIDaDpn~pl~~W 47 (231)
T PF07015_consen 2 PVITFASSKGGAGKTTAAMALASELAARGARVALIDADPNQPLAKW 47 (231)
T ss_pred CeEEEecCCCCCcHHHHHHHHHHHHHHCCCeEEEEeCCCCCcHHHH
Confidence 3455554 45669999999999999999999999999988766544
|
In Agrobacterium tumefaciens, a cis-active 24-base-pair sequence adjacent to the right border of the T-DNA, called overdrive, stimulates tumour formation by increasing the level of T-DNA processing. It is thought that the virC operon, which enhances T-DNA processing probably, does so because the VirC1 protein interacts with overdrive. It has now been shown that the virC1 gene product binds to overdrive but not to the right border of T-DNA []. |
| >KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=82.14 E-value=0.73 Score=45.46 Aligned_cols=62 Identities=15% Similarity=0.221 Sum_probs=47.3
Q ss_pred hHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeeccCCCccCHHHHHHHHHHHhcChHHHHHHHH
Q 012212 362 STMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGIITRQEIQRKVLTLLKNDDIRSNSLK 431 (468)
Q Consensus 362 s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~~~~r~~a~~ 431 (468)
++.||+++|+|+++. ++-.-+..|+. .--|...+..+ -....+++++.++.+|++++.+..+
T Consensus 381 v~IEAMa~glPvvAt----~~GGP~EiV~~-~~tG~l~dp~~---e~~~~~a~~~~kl~~~p~l~~~~~~ 442 (495)
T KOG0853|consen 381 VPIEAMACGLPVVAT----NNGGPAEIVVH-GVTGLLIDPGQ---EAVAELADALLKLRRDPELWARMGK 442 (495)
T ss_pred eeHHHHhcCCCEEEe----cCCCceEEEEc-CCcceeeCCch---HHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 689999999999998 66666666666 25577776643 3445799999999999998766543
|
|
| >PRK08305 spoVFB dipicolinate synthase subunit B; Reviewed | Back alignment and domain information |
|---|
Probab=82.02 E-value=2.6 Score=36.34 Aligned_cols=46 Identities=9% Similarity=0.013 Sum_probs=34.2
Q ss_pred CCCCEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHH
Q 012212 2 SRQPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKI 47 (468)
Q Consensus 2 ~~~~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i 47 (468)
.+.+||++--.++.|=+.-...+++.|.++||+|.++.++.....+
T Consensus 3 l~~k~IllgVTGsiaa~k~a~~lir~L~k~G~~V~vv~T~aA~~~~ 48 (196)
T PRK08305 3 LKGKRIGFGLTGSHCTYDEVMPEIEKLVDEGAEVTPIVSYTVQTTD 48 (196)
T ss_pred CCCCEEEEEEcCHHHHHHHHHHHHHHHHhCcCEEEEEECHhHHHHh
Confidence 3567887665555444444789999999999999999998765544
|
|
| >cd01425 RPS2 Ribosomal protein S2 (RPS2), involved in formation of the translation initiation complex, where it might contact the messenger RNA and several components of the ribosome | Back alignment and domain information |
|---|
Probab=81.72 E-value=7.2 Score=33.76 Aligned_cols=113 Identities=16% Similarity=0.111 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCCCCCCCcCCCCCHHHHHHHH---HHHhhHHH
Q 012212 20 PLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDGLELQAADREDPLKLGESV---ARAMRGCL 96 (468)
Q Consensus 20 p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 96 (468)
-...+.+.+.++|-+|.|+++......+.+..+... ....+.-..++.. ..+........ ...-...+
T Consensus 44 ~A~~~i~~i~~~~g~iLfV~t~~~~~~~v~~~a~~~--~~~~i~~rw~~G~-------LTN~~~~~~~~~~~~~~~~~~~ 114 (193)
T cd01425 44 LALNFIANIAAKGGKILFVGTKPQAQRAVKKFAERT--GSFYVNGRWLGGT-------LTNWKTIRKSIKRLKKLEKEKL 114 (193)
T ss_pred HHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHc--CCeeecCeecCCc-------CCCHHHHHHHHHHHHHHHHHHH
Confidence 344455667778999999999865544433222110 0011111222222 22322222211 11111223
Q ss_pred HHHHHHHhhCCCCCCceEEEecCCcc--cHHHHHHHhCCceEEEcccch
Q 012212 97 RDLIEKINQSNDCEPIRCVIADVTVG--SALEVAESMGIARAAVVPFGP 143 (468)
Q Consensus 97 ~~ll~~l~~~~~~~~pDlvi~D~~~~--~~~~~A~~lgiP~v~~~~~~~ 143 (468)
+..+..++... ..||+||+-...- .+..=|..+|||.|.+..+..
T Consensus 115 ~k~~~g~~~~~--~~Pdlviv~~~~~~~~ai~Ea~~l~IP~I~i~Dtn~ 161 (193)
T cd01425 115 EKNLGGIKDMF--RLPDLVIVLDPRKEHQAIREASKLGIPVIAIVDTNC 161 (193)
T ss_pred HHhcccccccc--cCCCEEEEeCCccchHHHHHHHHcCCCEEEEecCCC
Confidence 33333333332 6799977655333 566778889999999886543
|
It has been shown that in Escherichia coli RPS2 is essential for the binding of ribosomal protein S1 to the 30s ribosomal subunit. In humans, most likely in all vertebrates, and perhaps in all metazoans, the protein also functions as the 67 kDa laminin receptor (LAMR1 or 67LR), which is formed from a 37 kDa precursor, and is overexpressed in many tumors. 67LR is a cell surface receptor which interacts with a variety of ligands, laminin-1 and others. It is assumed that the ligand interactions are mediated via the conserved C-terminus, which becomes extracellular as the protein undergoes conformational changes which are not well understood. Specifically, a conserved palindromic motif, LMWWML, may participate in the interactions. 67LR plays essential roles in the adhesion of cells to the basement membrane an |
| >COG1484 DnaC DNA replication protein [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=81.46 E-value=2.9 Score=38.02 Aligned_cols=46 Identities=13% Similarity=0.260 Sum_probs=40.4
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHH
Q 012212 4 QPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIA 49 (468)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~ 49 (468)
...++|+-.+|.|-..=..+||++|.++|+.|+|++.+.....+..
T Consensus 105 ~~nl~l~G~~G~GKThLa~Ai~~~l~~~g~sv~f~~~~el~~~Lk~ 150 (254)
T COG1484 105 GENLVLLGPPGVGKTHLAIAIGNELLKAGISVLFITAPDLLSKLKA 150 (254)
T ss_pred CCcEEEECCCCCcHHHHHHHHHHHHHHcCCeEEEEEHHHHHHHHHH
Confidence 4578999999999999999999999999999999999887766655
|
|
| >cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis | Back alignment and domain information |
|---|
Probab=81.33 E-value=9.7 Score=38.75 Aligned_cols=83 Identities=12% Similarity=0.112 Sum_probs=49.1
Q ss_pred ChHHHhcCCCCCceee---ccCc-hhHHHhhhcCCceecccccc-chhhhHHHHHHHhh--ceeEeeccC--CCccCHHH
Q 012212 341 PQEKVLGHSSVACFIS---HCGW-NSTMEGLSMGVPFLCWPYFS-DQYQNRNYICEAWK--IGLQFFADE--NGIITRQE 411 (468)
Q Consensus 341 p~~~ll~~~~~~~~I~---hGG~-~s~~eal~~GvP~v~~P~~~-DQ~~na~rv~~~lG--~g~~l~~~~--~~~~t~~~ 411 (468)
++.+++..+++ +|. +=|+ -++.||+++|+|+|+....+ .... ..+... | .|+.+...+ +-.-+.++
T Consensus 467 ~y~E~~~g~dl--~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v--~E~v~~-~~~~gi~V~~r~~~~~~e~v~~ 541 (590)
T cd03793 467 DYEEFVRGCHL--GVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFM--EEHIED-PESYGIYIVDRRFKSPDESVQQ 541 (590)
T ss_pred chHHHhhhceE--EEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhh--HHHhcc-CCCceEEEecCCccchHHHHHH
Confidence 46677755555 766 3454 58999999999999985421 1111 112111 2 466665322 11135788
Q ss_pred HHHHHHHHhcChHHHHHH
Q 012212 412 IQRKVLTLLKNDDIRSNS 429 (468)
Q Consensus 412 l~~ai~~~l~~~~~r~~a 429 (468)
|++++.++++. +.|++.
T Consensus 542 La~~m~~~~~~-~~r~~~ 558 (590)
T cd03793 542 LTQYMYEFCQL-SRRQRI 558 (590)
T ss_pred HHHHHHHHhCC-cHHHHH
Confidence 99999998854 434433
|
GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity. |
| >KOG0780 consensus Signal recognition particle, subunit Srp54 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=81.18 E-value=17 Score=34.70 Aligned_cols=42 Identities=17% Similarity=0.243 Sum_probs=37.3
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHH
Q 012212 5 PHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKK 46 (468)
Q Consensus 5 ~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~ 46 (468)
.-|+|+-.-+.|-..-+..+|..+.++|+.+-+++.+.|+..
T Consensus 102 sVimfVGLqG~GKTTtc~KlA~y~kkkG~K~~LvcaDTFRag 143 (483)
T KOG0780|consen 102 SVIMFVGLQGSGKTTTCTKLAYYYKKKGYKVALVCADTFRAG 143 (483)
T ss_pred cEEEEEeccCCCcceeHHHHHHHHHhcCCceeEEeecccccc
Confidence 446688888999999999999999999999999999988653
|
|
| >PRK13789 phosphoribosylamine--glycine ligase; Provisional | Back alignment and domain information |
|---|
Probab=81.15 E-value=6 Score=39.09 Aligned_cols=38 Identities=13% Similarity=0.034 Sum_probs=30.6
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcc
Q 012212 1 MSRQPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFI 43 (468)
Q Consensus 1 m~~~~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~ 43 (468)
|.++||||++-.+++-| +||+.|.+-++-..+++.|.+
T Consensus 1 ~~~~~kvLviG~g~reh-----al~~~~~~~~~~~~~~~~pgn 38 (426)
T PRK13789 1 MQVKLKVLLIGSGGRES-----AIAFALRKSNLLSELKVFPGN 38 (426)
T ss_pred CCCCcEEEEECCCHHHH-----HHHHHHHhCCCCCEEEEECCc
Confidence 78899999998888877 799999999866566665554
|
|
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=80.61 E-value=2.2 Score=36.07 Aligned_cols=35 Identities=11% Similarity=0.167 Sum_probs=25.9
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcc
Q 012212 5 PHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFI 43 (468)
Q Consensus 5 ~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~ 43 (468)
|||.++.-.+. +- ..|+++..+|||+||-++-...
T Consensus 1 mKIaiIgAsG~--~G--s~i~~EA~~RGHeVTAivRn~~ 35 (211)
T COG2910 1 MKIAIIGASGK--AG--SRILKEALKRGHEVTAIVRNAS 35 (211)
T ss_pred CeEEEEecCch--hH--HHHHHHHHhCCCeeEEEEeChH
Confidence 67887764443 22 3688999999999999997553
|
|
| >PRK05973 replicative DNA helicase; Provisional | Back alignment and domain information |
|---|
Probab=80.36 E-value=20 Score=32.18 Aligned_cols=45 Identities=13% Similarity=0.180 Sum_probs=37.5
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHh
Q 012212 6 HVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIAS 50 (468)
Q Consensus 6 ~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~ 50 (468)
-+++...||.|-..-.+.+|...+++|+.|.|++.+...+.+...
T Consensus 66 l~LIaG~PG~GKT~lalqfa~~~a~~Ge~vlyfSlEes~~~i~~R 110 (237)
T PRK05973 66 LVLLGARPGHGKTLLGLELAVEAMKSGRTGVFFTLEYTEQDVRDR 110 (237)
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHhcCCeEEEEEEeCCHHHHHHH
Confidence 356778889999999999999998999999999998776655543
|
|
| >PRK01077 cobyrinic acid a,c-diamide synthase; Validated | Back alignment and domain information |
|---|
Probab=80.02 E-value=18 Score=36.13 Aligned_cols=38 Identities=13% Similarity=0.298 Sum_probs=30.2
Q ss_pred CCEEEEEcCC-CccChHHHHHHHHHHHHCCCEEEEEECC
Q 012212 4 QPHVLVIPYP-AQGHVAPLMKLATKIAERAIKVTVVNTQ 41 (468)
Q Consensus 4 ~~~Il~~~~~-~~GH~~p~~~LA~~L~~rGH~Vt~~~~~ 41 (468)
|.+|++.... +.|-..-...|++.|+++|++|..+-+.
T Consensus 3 m~~i~I~gt~s~~GKT~it~~L~~~L~~~G~~V~~fK~G 41 (451)
T PRK01077 3 MPALVIAAPASGSGKTTVTLGLMRALRRRGLRVQPFKVG 41 (451)
T ss_pred CcEEEEEeCCCCCcHHHHHHHHHHHHHhCCCCcceeecC
Confidence 4466666443 4589999999999999999999988764
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 468 | ||||
| 2pq6_A | 482 | Crystal Structure Of Medicago Truncatula Ugt85h2- I | 1e-72 | ||
| 2vce_A | 480 | Characterization And Engineering Of The Bifunctiona | 2e-39 | ||
| 2c1x_A | 456 | Structure And Activity Of A Flavonoid 3-O Glucosylt | 8e-36 | ||
| 3hbf_A | 454 | Structure Of Ugt78g1 Complexed With Myricetin And U | 2e-34 | ||
| 2acw_A | 465 | Crystal Structure Of Medicago Truncatula Ugt71g1 Co | 7e-33 | ||
| 2acv_A | 463 | Crystal Structure Of Medicago Truncatula Ugt71g1 Le | 1e-32 | ||
| 2o6l_A | 170 | Crystal Structure Of The Udp-Glucuronic Acid Bindin | 2e-06 | ||
| 2iya_A | 424 | The Crystal Structure Of Macrolide Glycosyltransfer | 2e-05 |
| >pdb|2PQ6|A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights Into The Structural Basis Of A Multifunctional (Iso) Flavonoid Glycosyltransferase Length = 482 | Back alignment and structure |
|
| >pdb|2VCE|A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants Length = 480 | Back alignment and structure |
|
| >pdb|2C1X|A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification Length = 456 | Back alignment and structure |
|
| >pdb|3HBF|A Chain A, Structure Of Ugt78g1 Complexed With Myricetin And Udp Length = 454 | Back alignment and structure |
|
| >pdb|2ACW|A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose Length = 465 | Back alignment and structure |
|
| >pdb|2ACV|A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Length = 463 | Back alignment and structure |
|
| >pdb|2O6L|A Chain A, Crystal Structure Of The Udp-Glucuronic Acid Binding Domain Of The Human Drug Metabolizing Udp-Glucuronosyltransferase 2b7 Length = 170 | Back alignment and structure |
|
| >pdb|2IYA|A Chain A, The Crystal Structure Of Macrolide Glycosyltransferases: A Blueprint For Antibiotic Engineering Length = 424 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10 Length = 482 | Back alignment and structure |
|---|
Score = 519 bits (1340), Expect = 0.0
Identities = 158/478 (33%), Positives = 245/478 (51%), Gaps = 24/478 (5%)
Query: 2 SRQPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQ 61
+R+PHV++IPYP QGH+ PL KLA + R +T VNT++ HK+++ S KA D +
Sbjct: 6 NRKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTD 65
Query: 62 IKLVTIPDGLELQAADR---EDPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIAD 118
+IPDGL D +D L +SV + +L+ ++N S + P+ C+++D
Sbjct: 66 FNFESIPDGLTPMEGDGDVSQDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSD 125
Query: 119 VTVGSALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGIIDPNGFAILNDG-LISLS 177
+ ++ AE + SL + F +E GII + L +G L +
Sbjct: 126 CCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVERGIIPFKDESYLTNGCLETKV 185
Query: 178 DEIPAWKRNEYTW--SFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACD-- 233
D IP K F + I+L V V I+ N+ EL+S +
Sbjct: 186 DWIPGLKNFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESDVINAL 245
Query: 234 --LIPNILPIGPLLASN-------HSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSV 284
IP+I PIGPL + LD N W ED+ CL WL+ + SVVYV FGS
Sbjct: 246 SSTIPSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGST 305
Query: 285 AVLSQQQFAELALGLESLQKPFLWVIRQDFMNGSRAKFPDGFIERVSNRGKIVEWAPQEK 344
V++ +Q E A GL + +K FLW+IR D + G F F +++RG I W PQ+K
Sbjct: 306 TVMTPEQLLEFAWGLANCKKSFLWIIRPDLVIGGSVIFSSEFTNEIADRGLIASWCPQDK 365
Query: 345 VLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADEN 404
VL H S+ F++HCGWNST E + GVP LCWP+F+DQ + +IC W+IG++ +
Sbjct: 366 VLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEI----D 421
Query: 405 GIITRQEIQRKVLTLLKNDD---IRSNSLKLKEVARKSLLGGGSSFRNFESFISDIKM 459
+ R+E+ + + ++ D ++ +++LK+ A ++ GG S+ N I D+ +
Sbjct: 422 TNVKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKVIKDVLL 479
|
| >2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A* Length = 456 | Back alignment and structure |
|---|
Score = 472 bits (1217), Expect = e-165
Identities = 119/468 (25%), Positives = 198/468 (42%), Gaps = 32/468 (6%)
Query: 2 SRQPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTV--VNTQFIHKKIIASLQEKAEDSS 59
+ PHV V+ +P H APL+ + ++A A +T + I + +
Sbjct: 5 TTNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMHTMQCN- 63
Query: 60 SQIKLVTIPDGLELQAADREDPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADV 119
IK I DG+ P + E RA R + P+ C++AD
Sbjct: 64 --IKSYDISDGVPEGYVFAGRPQEDIELFTRAAPESFRQGMVMAVAETGR-PVSCLVADA 120
Query: 120 TVGSALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGIIDPNGFAILNDGLISLSDE 179
+ A ++A MG+A GP SL+ + ++ E + + L +
Sbjct: 121 FIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIGVSG-----IQGREDELLNF 175
Query: 180 IPAWK--RNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACD---- 233
IP R + + ++ + Q + + + NS ELD +
Sbjct: 176 IPGMSKVRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLKS 235
Query: 234 LIPNILPIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFA 293
+ L IGP + CL WL E+ SVVY++FG+V +
Sbjct: 236 KLKTYLNIGPFNLIT-----PPPVVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVV 290
Query: 294 ELALGLESLQKPFLWVIRQDFMNGSRAKFPDGFIERVSNRGKIVEWAPQEKVLGHSSVAC 353
L+ LE+ + PF+W +R +R P+GF+E+ G +V WAPQ +VL H +V
Sbjct: 291 ALSEALEASRVPFIWSLRDK----ARVHLPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGA 346
Query: 354 FISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGIITRQEIQ 413
F++HCGWNS E ++ GVP +C P+F DQ N + + +IG++ E G+ T+ +
Sbjct: 347 FVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRI---EGGVFTKSGLM 403
Query: 414 RKVLTLL---KNDDIRSNSLKLKEVARKSLLGGGSSFRNFESFISDIK 458
+L K +R N L+E A +++ GSS NF + + +
Sbjct: 404 SCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVS 451
|
| >3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} PDB: 3hbj_A* Length = 454 | Back alignment and structure |
|---|
Score = 465 bits (1198), Expect = e-162
Identities = 121/467 (25%), Positives = 200/467 (42%), Gaps = 34/467 (7%)
Query: 2 SRQPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTV---VNTQFIHKKIIASLQEKAEDS 58
+ HV V+ +P H APL+ L KIA A KVT T ++ +
Sbjct: 11 NNLLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFS-----RSNEF 65
Query: 59 SSQIKLVTIPDGLELQAADREDPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIAD 118
IK + DGL +P + +AM+ + +I++ + I C++ D
Sbjct: 66 LPNIKYYNVHDGLPKGYVSSGNPREPIFLFIKAMQENFKHVIDEAVAETG-KNITCLVTD 124
Query: 119 VTVGSALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGIIDPNGFAILNDGLISLSD 178
++AE M + GP SL + + E + + I +
Sbjct: 125 AFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREKTGSKE----VHDVKSIDVLP 180
Query: 179 EIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACDLI--- 235
P K ++ + ++ + + +N + NS + + +
Sbjct: 181 GFPELKASDLPEGVIKDIDV--PFATMLHKMGLELPRANAVAINSFATIHPLIENELNSK 238
Query: 236 -PNILPIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAE 294
+L +GP + S++ CL WLD+ SVVY++FGSV +
Sbjct: 239 FKLLLNVGPFNLTTPQ-----RKVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTA 293
Query: 295 LALGLESLQKPFLWVIRQDFMNGSRAKFPDGFIERVSNRGKIVEWAPQEKVLGHSSVACF 354
LA LE PF+W R D + K P GF+ER +GKIV WAPQ ++L HSSV F
Sbjct: 294 LAESLEECGFPFIWSFRGD----PKEKLPKGFLERTKTKGKIVAWAPQVEILKHSSVGVF 349
Query: 355 ISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGIITRQEIQR 414
++H GWNS +E + GVP + P+F DQ N +IG+ +NG++T++ I++
Sbjct: 350 LTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGV---DNGVLTKESIKK 406
Query: 415 KVLTLL---KNDDIRSNSLKLKEVARKSLLGGGSSFRNFESFISDIK 458
+ + K +R +KLKE A K++ G+S +F + I +
Sbjct: 407 ALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVT 453
|
| >2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A* Length = 463 | Back alignment and structure |
|---|
Score = 428 bits (1102), Expect = e-147
Identities = 115/474 (24%), Positives = 208/474 (43%), Gaps = 33/474 (6%)
Query: 1 MSRQPHVLVIPYPAQGHVAPLMKLATKIAERA--IKVTVVNTQFIHKKIIASLQEKAEDS 58
+++ ++ IP P GH+A ++ A + + +TV +F S + S
Sbjct: 6 INKNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLAS 65
Query: 59 SSQIKLVTIPDGLELQAADREDPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIAD 118
QI+L+ +P+ + P + ++ ++ I+ I + + ++ D
Sbjct: 66 QPQIQLIDLPEVEPPPQELLKSPEFYILTFLESLIPHVKATIKTILSN----KVVGLVLD 121
Query: 119 VTVGSALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGIIDPNGFAILNDGLISLSD 178
S ++V GI + G L+L L + D + + L+++
Sbjct: 122 FFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIEEVFD---DSDRDHQLLNIPG 178
Query: 179 EIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACD----- 233
I + I + + + + II N+ +L+ + D
Sbjct: 179 -ISNQVPSNVLPDACFNKDGGYIAY---YKLAERFRDTKGIIVNTFSDLEQSSIDALYDH 234
Query: 234 --LIPNILPIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAV-LSQQ 290
IP I +GPLL + ++ L WLDEQ +SVV++ FGS+ V
Sbjct: 235 DEKIPPIYAVGPLLDLKGQPN-PKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPS 293
Query: 291 QFAELALGLESLQKPFLWVIRQDFMNGSRAKFPDGFIE--RVSNRGKIVEWAPQEKVLGH 348
Q E+ALGL+ FLW + + FP+GF+E + +G I WAPQ +VL H
Sbjct: 294 QIREIALGLKHSGVRFLWSNSAE-----KKVFPEGFLEWMELEGKGMICGWAPQVEVLAH 348
Query: 349 SSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFAD---ENG 405
++ F+SHCGWNS +E + GVP L WP +++Q N + + W +GL D +
Sbjct: 349 KAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRKGSD 408
Query: 406 IITRQEIQRKVLTLL-KNDDIRSNSLKLKEVARKSLLGGGSSFRNFESFISDIK 458
++ +EI++ + L+ K+ + ++KE++R +++ GGSS + I DI
Sbjct: 409 VVAAEEIEKGLKDLMDKDSIVHKKVQEMKEMSRNAVVDGGSSLISVGKLIDDIT 462
|
| >2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A* Length = 480 | Back alignment and structure |
|---|
Score = 411 bits (1059), Expect = e-141
Identities = 124/493 (25%), Positives = 206/493 (41%), Gaps = 46/493 (9%)
Query: 1 MSRQPHVLVIPYPAQGHVAPLMKLATKIAE-RAIKVTVVNTQFIHKKIIASLQEKAEDSS 59
S+ PHV +IP P GH+ PL++ A ++ + VT V + SS
Sbjct: 3 ESKTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLDSLPSS 62
Query: 60 SQIKLVTIPDGLELQAADREDPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADV 119
I V +P + LR + + + ++ D+
Sbjct: 63 --ISSVFLPPVDLTDLSSSTRIESRISLTVTRSNPELRKVFDSFVEGGR--LPTALVVDL 118
Query: 120 TVGSALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGIIDPNGFAILND--GLISL- 176
A +VA + P L+ L PKL E + G + +
Sbjct: 119 FGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSCEFRELTEPLMLPGCVPVA 178
Query: 177 SDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACDLI- 235
+ ++ + + + +L + K + I+ N+ +EL+ A +
Sbjct: 179 GKDFLDPAQD------RKDDAYKWLL-----HNTKRYKEAEGILVNTFFELEPNAIKALQ 227
Query: 236 ------PNILPIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQ 289
P + P+GPL+ +E+S CL WLD Q + SV+YV+FGS L+
Sbjct: 228 EPGLDKPPVYPVGPLVNIGKQEAK----QTEESECLKWLDNQPLGSVLYVSFGSGGTLTC 283
Query: 290 QQFAELALGLESLQKPFLWVIRQDFMNGSRAKF------------PDGFIERVSNRGKIV 337
+Q ELALGL ++ FLWVIR + + F P GF+ER RG ++
Sbjct: 284 EQLNELALGLADSEQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVI 343
Query: 338 -EWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIG 396
WAPQ +VL H S F++HCGWNST+E + G+P + WP +++Q N + E +
Sbjct: 344 PFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAA 403
Query: 397 LQFFADENGIITRQEIQRKVLTLL---KNDDIRSNSLKLKEVARKSLLGGGSSFRNFESF 453
L+ A ++G++ R+E+ R V L+ + +R+ +LKE A + L G+S +
Sbjct: 404 LRPRAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLV 463
Query: 454 ISDIKMLISGCDS 466
K +
Sbjct: 464 ALKWKAHKKELEQ 476
|
| >2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} Length = 424 | Back alignment and structure |
|---|
Score = 135 bits (341), Expect = 2e-35
Identities = 64/441 (14%), Positives = 123/441 (27%), Gaps = 51/441 (11%)
Query: 2 SRQPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQ 61
H+ P GHV P + + ++ R +V+ T + + +
Sbjct: 10 VTPRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAIT--------DEFAAQVKAAG-- 59
Query: 62 IKLVTIPDGL----ELQAADREDPLKLGESVARAMRGCLRDLIEKINQSN-DCEPIRCVI 116
V L + + ED L L + D ++
Sbjct: 60 ATPVVYDSILPKESNPEESWPEDQESAMGLFLDEAVRVLPQLEDAYADDRPDL-----IV 114
Query: 117 ADVTVGSALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGIIDPNGFAILNDGLISL 176
D+ A + I + P P + + A +
Sbjct: 115 YDIASWPAPVLGRKWDIPFVQLSPTFVAYEGFEEDVPAVQDPTADRGEEAAAPAGTGDAE 174
Query: 177 SDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACDLIP 236
+ E G+ + + N I +
Sbjct: 175 EGAEAEDGLVRFFTRLSAFLEE----HGVDTPATEFLIAPNRCIVALPRTFQIKGDTVGD 230
Query: 237 NILPIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELA 296
N +GP + S +W R V+ +A GS +
Sbjct: 231 NYTFVGPTYG-------------DRSHQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCL 277
Query: 297 LGLESLQKPFLWVIRQDFMNGSRAKFPDGFIERVSNRGKIVEWAPQEKVLGHSSVACFIS 356
++ L + + + + P + +W PQ +L + FI+
Sbjct: 278 SAVDGLDWHVVLSVGRFVDPADLGEVPPNVE--------VHQWVPQLDILTK--ASAFIT 327
Query: 357 HCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGIITRQEIQRKV 416
H G STME LS VP + P ++Q N I +G D+ +T ++++ V
Sbjct: 328 HAGMGSTMEALSNAVPMVAVPQIAEQTMNAERI-VELGLGRHIPRDQ---VTAEKLREAV 383
Query: 417 LTLLKNDDIRSNSLKLKEVAR 437
L + + + +++ R
Sbjct: 384 LAVASDPGVAERLAAVRQEIR 404
|
| >2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} Length = 430 | Back alignment and structure |
|---|
Score = 119 bits (301), Expect = 6e-30
Identities = 71/447 (15%), Positives = 131/447 (29%), Gaps = 75/447 (16%)
Query: 1 MSRQP---HVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAED 57
M+ Q H+ + A GHV P +++ ++ R +VT +K
Sbjct: 1 MTTQTTPAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIP--------PVFADKVAA 52
Query: 58 SSSQIKLVTIPDGLELQAADRE----DPLKLGESVARAMRGCLRDLIEKINQSN-DCEPI 112
+ + V L AD E L E L L + D
Sbjct: 53 TG--PRPVLYHSTLPGPDADPEAWGSTLLDNVEPFLNDAIQALPQLADAYADDIPDL--- 107
Query: 113 RCVIADVTVGSALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGIIDPNGFAILNDG 172
V+ D+T A +A G+ V P +A ++ E +P
Sbjct: 108 --VLHDITSYPARVLARRWGVP---AVSLSPNLVAWKGYEEEVAEPMWREPRQTERGRAY 162
Query: 173 LISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPAC 232
+ E+ +F P + L A
Sbjct: 163 YARFEAWLKENGITEHPDTFASHP--------------------PRSLVLIPKALQPHAD 202
Query: 233 DLIPNILP-IGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQ 291
+ ++ +G GD W VV V+ GS
Sbjct: 203 RVDEDVYTFVGACQ-----GDRAEEGG--------WQRPAGAEKVVLVSLGSAFTKQPAF 249
Query: 292 FAELALGLESL-QKPFLWVIRQDFMNGSRAKFPDGFIERVSNRGKIVEWAPQEKVLGHSS 350
+ E +L + I + + PD + +W PQ +L +
Sbjct: 250 YRECVRAFGNLPGWHLVLQIGRKVTPAELGELPDNVE--------VHDWVPQLAILRQAD 301
Query: 351 VACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGIITRQ 410
+ F++H G + EGL+ P + P DQ+ N + + + + +E T
Sbjct: 302 L--FVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADMLQGL-GVARKLATEE---ATAD 355
Query: 411 EIQRKVLTLLKNDDIRSNSLKLKEVAR 437
++ L L+ + ++ +++
Sbjct: 356 LLRETALALVDDPEVARRLRRIQAEMA 382
|
| >3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* Length = 415 | Back alignment and structure |
|---|
Score = 110 bits (277), Expect = 1e-26
Identities = 58/443 (13%), Positives = 116/443 (26%), Gaps = 72/443 (16%)
Query: 1 MSRQPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSS 60
M+ +L++ + G + P + + T++ R +V+ V E +
Sbjct: 20 MAH---LLIVNVASHGLILPTLTVVTELVRRGHRVSYVTA--------GGFAEPVRAAG- 67
Query: 61 QIKLVTIPDGLELQAADR-----EDPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCV 115
+V + A + ++ R LR E + D + V
Sbjct: 68 -ATVVPYQSEIIDADAAEVFGSDDLGVRPHLMYLRENVSVLRATAEAL----DGDVPDLV 122
Query: 116 IAD-VTVGSALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGIIDPNGFAILNDGLI 174
+ D + +A + + S + AG IDP + D L
Sbjct: 123 LYDDFPFIAGQLLAARWRRPAVRLSAAFASNEHYSFSQDMVTLAGTIDPLDLPVFRDTLR 182
Query: 175 SLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACDL 234
L E + W+ ++ +
Sbjct: 183 DLLAEHGLSRSVVDCWNHVEQ----------------------LNLVFVPKAFQIAGDTF 220
Query: 235 IPNILPIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAE 294
+ +GP + L W VV V+ G+ F +
Sbjct: 221 DDRFVFVGPCF--DDRRFLG-----------EWTRPADDLPVVLVSLGTTFNDRPGFFRD 267
Query: 295 LALGLESLQKPFLWVIRQDFMNGSRAKFPDGFIERVSNRGKIVEWAPQEKVLGHSSVACF 354
A + + + + P W P KVL
Sbjct: 268 CARAFDGQPWHVVMTLGGQVDPAALGDLPPNVE--------AHRWVPHVKVLEQ--ATVC 317
Query: 355 ISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGIITRQEIQR 414
++H G + ME L G P + P D + + +G ++ +
Sbjct: 318 VTHGGMGTLMEALYWGRPLVVVPQSFDVQPMARRVDQL-GLGAVLPGEK---ADGDTLLA 373
Query: 415 KVLTLLKNDDIRSNSLKLKEVAR 437
V + + + + ++ R
Sbjct: 374 AVGAVAADPALLARVEAMRGHVR 396
|
| >3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} Length = 402 | Back alignment and structure |
|---|
Score = 109 bits (275), Expect = 1e-26
Identities = 67/444 (15%), Positives = 122/444 (27%), Gaps = 74/444 (16%)
Query: 3 RQPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQI 62
RQ H+L GHV P + L +++A R ++T V T ++ + +
Sbjct: 3 RQRHILFANVQGHGHVYPSLGLVSELARRGHRITYVTT--------PLFADEVKAAG--A 52
Query: 63 KLVTIPDGLELQAAD-----REDPLKLGESVARAMRGCLRDLIEKINQSN-DCEPIRCVI 116
++V + + +L R LR E + + D V+
Sbjct: 53 EVVLYKSEFDTFHVPEVVKQEDAETQLHLVYVRENVAILRAAEEALGDNPPDL-----VV 107
Query: 117 ADVTVGSALE-VAESMGIARAAVVPFGPGSLALSLQFPKLLEAGIIDPNGFAILNDGLIS 175
DV A +A + + SL G P ++ L+
Sbjct: 108 YDVFPFIAGRLLAARWDRPAVRLTGGFAANEHYSLFKELWKSNGQRHPADVEAVHSVLVD 167
Query: 176 LSDEIP-AWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACDL 234
L + EY I A
Sbjct: 168 LLGKYGVDTPVKEYWDEIEG-----------------------LTIVFLPKSFQPFAETF 204
Query: 235 IPNILPIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAE 294
+GP L G W + V+ V+ G+ + F
Sbjct: 205 DERFAFVGPTL--TGRDGQPG-----------WQPPRPDAPVLLVSLGNQFNEHPEFFRA 251
Query: 295 LALGLESLQKPFLWVIRQDFMNGSRAKFPDGFIERVSNRGKIVEWAPQEKVLGHSSVACF 354
A + I P +W P VL H+
Sbjct: 252 CAQAFADTPWHVVMAIGGFLDPAVLGPLPPNVE--------AHQWIPFHSVLAHARA--C 301
Query: 355 ISHCGWNSTMEGLSMGVPFLCWPYFS-DQYQNRNYICEAWKIGLQFFADENGIITRQEIQ 413
++H + +E + GVP + P+F+ + + + E +G D+ + I+
Sbjct: 302 LTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSAERVIEL-GLGSVLRPDQ---LEPASIR 357
Query: 414 RKVLTLLKNDDIRSNSLKLKEVAR 437
V L + +R +++
Sbjct: 358 EAVERLAADSAVRERVRRMQRDIL 381
|
| >3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* Length = 412 | Back alignment and structure |
|---|
Score = 97.8 bits (244), Expect = 2e-22
Identities = 70/439 (15%), Positives = 118/439 (26%), Gaps = 82/439 (18%)
Query: 6 HVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIAS----------LQEKA 55
VL GH PL+ LAT +VT + + + +
Sbjct: 22 RVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLRKLGFEPVATGMPVFDGF 81
Query: 56 EDSSSQIKLVTIPDGLELQAADREDPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCV 115
+ P+GL + + G + + + L+ +IE P V
Sbjct: 82 LAALRIRFDTDSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIE------RLRPD-LV 134
Query: 116 IADVTVGSALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGIIDPNGFAILNDGLIS 175
+ +++ A A GI G D L
Sbjct: 135 VQEISNYGAGLAALKAGI-PTICHGVGRD------------------------TPDDLTR 169
Query: 176 LSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACDLI 235
+E P + N I+ L P
Sbjct: 170 SIEEEVRGLAQRLGLDLPPGRIDG---------------FGNPFIDIFPPSLQEPEFRAR 214
Query: 236 PNILPIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAEL 295
P + P+ + D W R +VY+ G+ + + +
Sbjct: 215 PRRHELRPVP---FAEQGDLPAW--------LSSRDTARPLVYLTLGTSSGGTVEVLRAA 263
Query: 296 ALGLESLQKPFLWVIRQDFMNGSRAKFPDGFIERVSNRGKIVEWAPQEKVLGHSSVACFI 355
GL L L + P + W PQ +L H V +
Sbjct: 264 IDGLAGLDADVLVASGPSLDVSGLGEVPANVR--------LESWVPQAALLPH--VDLVV 313
Query: 356 SHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGIITRQEIQRK 415
H G +T+ L GVP L +P+ D + N + +A G D I+ +
Sbjct: 314 HHGGSGTTLGALGAGVPQLSFPWAGDSFANAQAVAQA-GAGDHLLPDN---ISPDSVSGA 369
Query: 416 VLTLLKNDDIRSNSLKLKE 434
LL + R+ + +
Sbjct: 370 AKRLLAEESYRAGARAVAA 388
|
| >2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} Length = 170 | Back alignment and structure |
|---|
Score = 91.5 bits (228), Expect = 6e-22
Identities = 33/172 (19%), Positives = 74/172 (43%), Gaps = 17/172 (9%)
Query: 267 WLDEQAIRSVVYVAFGS-VAVLSQQQFAELALGLESLQKPFLWVIRQDFMNGSRAKFPDG 325
++ VV + GS V+ +++++ +A L + + LW +F
Sbjct: 14 FVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLW------------RFDGN 61
Query: 326 FIERVSNRGKIVEWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQN 385
+ + ++ +W PQ +LGH FI+H G N E + G+P + P F+DQ N
Sbjct: 62 KPDTLGLNTRLYKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDN 121
Query: 386 RNYICEAWKIGLQFFADENGIITRQEIQRKVLTLLKNDDIRSNSLKLKEVAR 437
++ +A ++ + ++ ++ + ++ + + N +KL +
Sbjct: 122 IAHM-KARGAAVRVDFNT---MSSTDLLNALKRVINDPSYKENVMKLSRIQH 169
|
| >3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* Length = 391 | Back alignment and structure |
|---|
Score = 77.1 bits (190), Expect = 2e-15
Identities = 57/435 (13%), Positives = 112/435 (25%), Gaps = 77/435 (17%)
Query: 7 VLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVT 66
VLV+P P H+ ++ L + +V + LQ A + L T
Sbjct: 4 VLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAP--------PELQATAHGA----GLTT 51
Query: 67 IPDGLELQAADREDPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVGSALE 126
+ D +L + + E +A ++ E
Sbjct: 52 AGIRGNDRTGDTGGTTQLRFPNPAFGQRDTEAGRQLW------EQTASNVAQSSLDQLPE 105
Query: 127 VAESMGIARAAVV-----PFGPGSLALSLQFPKLLEAGIIDPNGFAILNDGLISLSDEIP 181
R +V+ L L P +L G + E+
Sbjct: 106 YLRLAEAWRPSVLLVDVCALIGRVLGGLLDLPVVLHR-----WGVDPTAGPFSDRAHELL 160
Query: 182 AWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACDLIPNILPI 241
+ + P I++ L + + +
Sbjct: 161 DPVCRHHGLTGLPTPE--------------------LILDPCPPSLQASDAPQGAPVQYV 200
Query: 242 GPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALGLES 301
N SG +W + V + G + + + L +
Sbjct: 201 PY----NGSGAFP-----------AWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA 245
Query: 302 LQKPFLWVIRQ--DFMNGSRAKFPDGFIERVSNRGKIVEWAPQEKVLGHSSVACFISHCG 359
+ P + + PD I E P L I G
Sbjct: 246 TELPGVEAVIAVPPEHRALLTDLPDNAR--------IAESVPLNLFLRT--CELVICAGG 295
Query: 360 WNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGIITRQEIQRKVLTL 419
+ +G+P L P + DQ+ + A G+ ++ ++ + T+
Sbjct: 296 SGTAFTATRLGIPQLVLPQYFDQFDYARNLAAA-GAGICLPDEQ-AQSDHEQFTDSIATV 353
Query: 420 LKNDDIRSNSLKLKE 434
L + + ++KL +
Sbjct: 354 LGDTGFAAAAIKLSD 368
|
| >2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} Length = 441 | Back alignment and structure |
|---|
Score = 71.8 bits (176), Expect = 1e-13
Identities = 65/459 (14%), Positives = 127/459 (27%), Gaps = 83/459 (18%)
Query: 1 MSRQPH--VLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDS 58
+ R H V+ ++ H+ L+ LA +V VV + +L E +
Sbjct: 15 VPRGSHMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVAS--------PALTEDITAA 66
Query: 59 SSQIKLVTIPDGLELQAADRE------DPLKLGESVARAMRGCLRDLIEKINQSNDCEPI 112
+ V + ++L D ++ + R + + +
Sbjct: 67 G--LTAVPVGTDVDLVDFMTHAGHDIIDYVRSLDFSERDPATLTWEHLLGMQTVLTPTFY 124
Query: 113 RCVIADVTVGSALEVAESMGIARAAVV-----PFGPGSLALSLQFPKLLEAGIIDPNGFA 167
+ D + + R +V F A P A
Sbjct: 125 ALMSPDTLIEGMVSFCRK---WRPDLVIWEPLTFAAPIAAAVTGTP------------HA 169
Query: 168 ILNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYEL 227
L G R + PD+P E + W + Y
Sbjct: 170 RLLWGPDI-----TTRARQNFLGLLPDQPEEH--------REDPLAEWLTWTLE--KYGG 214
Query: 228 DSPACDLIPNILPIGPLLASNHSGDLDGNFWSEDSSCL---------SWLDEQAIRSVVY 278
+ +++ I P A+ LD + + WL ++ R V
Sbjct: 215 PAFDEEVVVGQWTIDPAPAAI---RLDTGLKTVGMRYVDYNGPSVVPEWLHDEPERRRVC 271
Query: 279 VAFGSVAVLSQQQFAELALGLESLQKP---FLWVIRQDFMNGSRAKFPDGFIERVSNRGK 335
+ G + + + L ++ + + A PD
Sbjct: 272 LTLGISSRENSIGQVSIEELLGAVGDVDAEIIATFDAQQL-EGVANIPDNVR-------- 322
Query: 336 IVEWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKI 395
V + P +L A + H G S GVP + P D E
Sbjct: 323 TVGFVPMHALLPT--CAATVHHGGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQEF-GA 379
Query: 396 GLQFFADENGIITRQEIQRKVLTLLKNDDIRSNSLKLKE 434
G+ E +T +++ V +L + R+ + ++++
Sbjct: 380 GIALPVPE---LTPDQLRESVKRVLDDPAHRAGAARMRD 415
|
| >2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} Length = 384 | Back alignment and structure |
|---|
Score = 71.4 bits (175), Expect = 1e-13
Identities = 33/179 (18%), Positives = 50/179 (27%), Gaps = 15/179 (8%)
Query: 258 WSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALG--LESLQKPFLWVIRQDFM 315
S W+ + R V V GS L + L + + +I
Sbjct: 194 TSRQCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDVELIV---- 249
Query: 316 NGSRAKFPDGFIERVSNRGKIVEWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLC 375
+ + V V W P + V + H G ST+ GLS GVP L
Sbjct: 250 -AAPDTVAEALRAEVPQA--RVGWTPLDVVAPT--CDLLVHHAGGVSTLTGLSAGVPQLL 304
Query: 376 WPYFSDQYQNRNYICEAWKIGLQFFADENGIITRQEIQRKVLTLLKNDDIRSNSLKLKE 434
P S + + + E + + I L D + L
Sbjct: 305 IPKGSVLEAPARRVADY-GAAIALLPGE---DSTEAIADSCQELQAKDTYARRAQDLSR 359
|
| >3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* Length = 398 | Back alignment and structure |
|---|
Score = 70.6 bits (173), Expect = 2e-13
Identities = 20/121 (16%), Positives = 37/121 (30%), Gaps = 13/121 (10%)
Query: 267 WLDEQAIRSVVYVAFGSVAV--LSQQQFAELALGLESLQKPFLWVIRQDFMNGSRAKFPD 324
L R V + G++ + + + F+ + ++ P
Sbjct: 225 RLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGEVDADFVLALGDLDISPLGT-LPR 283
Query: 325 GFIERVSNRGKIVEWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQ 384
V W P +L + H G + M + G+P L P DQ+Q
Sbjct: 284 NVR--------AVGWTPLHTLLRT--CTAVVHHGGGGTVMTAIDAGIPQLLAPDPRDQFQ 333
Query: 385 N 385
+
Sbjct: 334 H 334
|
| >3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} PDB: 3h4i_A* 1pn3_A* 1pnv_A* Length = 404 | Back alignment and structure |
|---|
Score = 69.1 bits (169), Expect = 6e-13
Identities = 60/389 (15%), Positives = 115/389 (29%), Gaps = 82/389 (21%)
Query: 7 VLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVT 66
VL+ ++G PL+ LA ++ E + E+ + +
Sbjct: 3 VLITGCGSRGDTEPLVALAARLRELGADARMCLP--------PDYVERCAEVG----VPM 50
Query: 67 IPDGLELQAADREDPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVGSAL- 125
+P G ++A R +P +L A + + + +K+ + E V+ + +A+
Sbjct: 51 VPVGRAVRAGAR-EPGELPPGAAEVVTEVVAEWFDKVPAA--IEGCDAVVTTGLLPAAVA 107
Query: 126 --EVAESMGI--ARAAVVPFGPGSLALSLQFPKLLEAGIIDPNGFAILNDGLISLSDEIP 181
+AE +GI + P S S + G D +
Sbjct: 108 VRSMAEKLGIPYRYTVLSPDHLPS-EQSQAERDMYNQGA------------DRLFGDAVN 154
Query: 182 AWKRNE-----YTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACDLIP 236
+ R + ++Q L + SP
Sbjct: 155 SH-RASIGLPPVEHLYDYGYTDQPWLAA--------------------DPVLSPLRPTDL 193
Query: 237 NILPIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELA 296
+ G + L + +L VYV FGS + A +A
Sbjct: 194 GTVQTGAWI-------LPDQ-RPLSAELEGFLRAG--SPPVYVGFGSGPA--PAEAARVA 241
Query: 297 LGLESLQKPFLWVIRQDFMNGSRAKFPDGFIERVSNRGKIVEWAPQEKVLGHSSVACFIS 356
+ E+++ V+ +G + +V + + G VA +
Sbjct: 242 I--EAVRAQGRRVV---LSSGWAGLGRIDEGDDC----LVVGEVNHQVLFGR--VAAVVH 290
Query: 357 HCGWNSTMEGLSMGVPFLCWPYFSDQYQN 385
H G +T G P + P +DQ
Sbjct: 291 HGGAGTTTAVTRAGAPQVVVPQKADQPYY 319
|
| >1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 Length = 416 | Back alignment and structure |
|---|
Score = 67.6 bits (165), Expect = 2e-12
Identities = 56/382 (14%), Positives = 105/382 (27%), Gaps = 50/382 (13%)
Query: 7 VLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVT 66
VL+ +G V + LA ++ ++ + + +E+ + +
Sbjct: 3 VLLSVCGTRGDVEIGVALADRLKALGVQTRMCAP--------PAAEERLAEV----GVPH 50
Query: 67 IPDGLELQAADREDPLKLGESVARAMRGCLRDLIEKINQS--NDCEPIRCVIADVTVGSA 124
+P GL +E + + ++ C + V
Sbjct: 51 VPVGLPQHMMLQEGMPPPPPEEEQRLAAMTVEMQFDAVPGAAEGCAAVVAVGDLAAATGV 110
Query: 125 LEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGIIDPNGFAILNDGLISLSDEIPAWK 184
VAE +G+ VP P LA P E +L + + +
Sbjct: 111 RSVAEKLGLPFFYSVPS-PVYLASPHLPPAYDEPTTPGVTDIRVLWEERAARFADRYGPT 169
Query: 185 RNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACDLIPNILPIGPL 244
N P E G + A + +P + + L
Sbjct: 170 LNRRRAEIGLPPVEDVFGYGHGERPLLAA-----------DPVLAPLQPDVDAVQTGAWL 218
Query: 245 LASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALGLESLQK 304
L+ ++L A V++ FGS + A++A+ E+++
Sbjct: 219 LSDE---------RPLPPELEAFLA--AGSPPVHIGFGSSSGRGIADAAKVAV--EAIRA 265
Query: 305 PFLWVIRQDFMNG-SRAKFPDGFIERVSNRGKIVEWAPQEKVLGHSSVACFISHCGWNST 363
VI D ++ + + VA I H +
Sbjct: 266 QGRRVILSRGWTELVLPDDRDDC--------FAIDEVNFQALFRR--VAAVIHHGSAGTE 315
Query: 364 MEGLSMGVPFLCWPYFSDQYQN 385
GVP L P +DQ
Sbjct: 316 HVATRAGVPQLVIPRNTDQPYF 337
|
| >4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* Length = 398 | Back alignment and structure |
|---|
Score = 67.1 bits (164), Expect = 3e-12
Identities = 25/174 (14%), Positives = 59/174 (33%), Gaps = 17/174 (9%)
Query: 266 SWLDEQAIRSVVYVAFGSVAVLSQQQFAELALGL-----ESLQKPFLWVIRQDFMNGSRA 320
SW+ E+ + + + FG+ L L L + L K V+ + +
Sbjct: 219 SWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKLGFEVV------VAVS 272
Query: 321 KFPDGFIERVSNRGKIVEWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFS 380
++ + P ++ + H G +T+ LS GVP + P +
Sbjct: 273 DKLAQTLQPLPEGVLAAGQFPLSAIMPA--CDVVVHHGGHGTTLTCLSEGVPQVSVPVIA 330
Query: 381 DQYQNRNYICEAWKIGLQFFADENGIITRQEIQRKVLTLLKNDDIRSNSLKLKE 434
+ + + + A G++ ++ + + + + N+ +L
Sbjct: 331 EVWDSARLLHAA-GAGVEVPWEQ---AGVESVLAACARIRDDSSYVGNARRLAA 380
|
| >1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 Length = 415 | Back alignment and structure |
|---|
Score = 56.8 bits (137), Expect = 7e-09
Identities = 53/390 (13%), Positives = 97/390 (24%), Gaps = 67/390 (17%)
Query: 7 VLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVT 66
VL+ ++G PL+ LA ++ + V + E+ + V
Sbjct: 3 VLLATCGSRGDTEPLVALAVRVRDLGADVRMCAP--------PDCAERLA--EVGVPHVP 52
Query: 67 IPDGLELQAADREDPLKLGESVARAMRGCLRDLIEKINQ-SNDCEPIRCVIADVTVGSAL 125
+ R PL E V R + ++I + C +
Sbjct: 53 V-GPSARAPIQRAKPL-TAEDVRRFTTEAIATQFDEIPAAAEGCAAVVTTGLLAAAIGVR 110
Query: 126 EVAESMGI--ARAAVVPFG-PGSLALSLQFPKLLEAGIIDPNGFAILNDGLI--SLSDEI 180
VAE +GI A P P + ID N+ +
Sbjct: 111 SVAEKLGIPYFYAFHCPSYVPSPYYPPPPLGEPSTQDTIDIPAQWERNNQSAYQRYGGLL 170
Query: 181 PAWKRNE-----YTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACDLI 235
+ R+ F ++ + + L +
Sbjct: 171 NSH-RDAIGLPPVEDIFTFGYTDHPWVA-------------------ADPVLAPLQPTDL 210
Query: 236 PNILPIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAEL 295
+ +L ++LD A VY+ FGS+
Sbjct: 211 DAVQTGAWILPDE---------RPLSPELAAFLD--AGPPPVYLGFGSLGA-PADAVRVA 258
Query: 296 ALGLESLQKPFLWVIRQDFMNGSRAKFPDGFIERVSNRGKIVEWAPQEKVLGHSSVACFI 355
+ + + + + + + + G VA I
Sbjct: 259 IDAIRAHGRRVILSRGWA--DLVLPDDGADC--------FAIGEVNHQVLFGR--VAAVI 306
Query: 356 SHCGWNSTMEGLSMGVPFLCWPYFSDQYQN 385
H G +T G P + P +DQ
Sbjct: 307 HHGGAGTTHVAARAGAPQILLPQMADQPYY 336
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 55.6 bits (133), Expect = 2e-08
Identities = 72/513 (14%), Positives = 142/513 (27%), Gaps = 150/513 (29%)
Query: 24 LATKIAERAIKVTVVNTQFI--HKKIIASLQEKAEDSSSQIKLVTIPDGLELQAADREDP 81
L + I + +++ +I ++ Q A+ + S+++ L+L+ A E
Sbjct: 94 LMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPY-----LKLRQALLE-- 146
Query: 82 LKLGESVA-RAMRGC---------LRDL-IEK--------INQSNDCEPIRCVIADVTVG 122
L+ ++V + G ++ +N N P + +
Sbjct: 147 LRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLL 206
Query: 123 SALEVAESMGIARAAVVPFGPGSLALSL-------QFPKLLEAGII-----DPNGFAILN 170
++ + ++ + S+ L + L ++ + + N
Sbjct: 207 YQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCL---LVLLNVQNAKAWNAFN 263
Query: 171 DG---LI-----SLSDEIPAWKR-----NEYTWSFPDEPSEQKILLGIICAVIQAVKISN 217
L+ ++D + A + ++ + P E K LL
Sbjct: 264 LSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTL--TPDEVKSLL------------LK 309
Query: 218 WIINNSVYELDSPACDLIPNILP-IGPLLASNHSGDLDGNFWSEDSSCLSWLD------E 270
++ + +L P L I + W W
Sbjct: 310 YL-DCRPQDLPREVLTTNPRRLSIIAESIRDGL------ATWDN------WKHVNCDKLT 356
Query: 271 QAIRSVVYVAFGSVAVLS----QQQFAELALGLESLQKP-----FLW--VIRQD---FMN 316
I S S+ VL ++ F L++ S P +W VI+ D +N
Sbjct: 357 TIIES-------SLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVN 409
Query: 317 GSRAKFPDGFIERVSNRGKI---------VEWAPQEKVLGHSS-VACFISHCGWNSTMEG 366
+E+ I E L H S V + +
Sbjct: 410 KLHKY---SLVEKQPKESTISIPSIYLELKVKLENEYAL-HRSIVDHYNIPKTF------ 459
Query: 367 LSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGIITRQEIQRKV---LTLLKND 423
Y Y IG E+ R + R V L+
Sbjct: 460 --------DSDDLIPPY-LDQYFY--SHIGHHLKNIEHP--ERMTLFRMVFLDFRFLEQK 506
Query: 424 DIRSNSLKLKEVARKSLLGGGSSFRNFESFISD 456
IR +S A S+L + ++ +I D
Sbjct: 507 -IRHDSTAWN--ASGSILNTLQQLKFYKPYICD 536
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 468 | |||
| 3hbf_A | 454 | Flavonoid 3-O-glucosyltransferase; glycosyltransfe | 100.0 | |
| 2pq6_A | 482 | UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl | 100.0 | |
| 2vch_A | 480 | Hydroquinone glucosyltransferase; glycosyltransfer | 100.0 | |
| 2c1x_A | 456 | UDP-glucose flavonoid 3-O glycosyltransferase; WIN | 100.0 | |
| 2acv_A | 463 | Triterpene UDP-glucosyl transferase UGT71G1; glyco | 100.0 | |
| 2iya_A | 424 | OLEI, oleandomycin glycosyltransferase; carbohydra | 100.0 | |
| 4amg_A | 400 | Snogd; transferase, polyketide biosynthesis, GT1 f | 100.0 | |
| 3rsc_A | 415 | CALG2; TDP, enediyne, structural genomics, PSI-2, | 100.0 | |
| 1iir_A | 415 | Glycosyltransferase GTFB; rossmann fold; 1.80A {Am | 100.0 | |
| 3ia7_A | 402 | CALG4; glycosysltransferase, calicheamicin, enediy | 100.0 | |
| 1rrv_A | 416 | Glycosyltransferase GTFD; GT-B, glycosyltransferas | 100.0 | |
| 3h4t_A | 404 | Glycosyltransferase GTFA, glycosyltransferase; van | 100.0 | |
| 2iyf_A | 430 | OLED, oleandomycin glycosyltransferase; antibiotic | 100.0 | |
| 2yjn_A | 441 | ERYCIII, glycosyltransferase; transferase, cytochr | 100.0 | |
| 2p6p_A | 384 | Glycosyl transferase; X-RAY-diffraction,urdamycina | 100.0 | |
| 4fzr_A | 398 | SSFS6; structural genomics, PSI-biology, protein s | 100.0 | |
| 3oti_A | 398 | CALG3; calicheamicin, TDP, structural genomics, PS | 100.0 | |
| 3tsa_A | 391 | SPNG, NDP-rhamnosyltransferase; glycosyltransferas | 100.0 | |
| 3otg_A | 412 | CALG1; calicheamicin, TDP, structural genomics, PS | 100.0 | |
| 3s2u_A | 365 | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape | 99.97 | |
| 2o6l_A | 170 | UDP-glucuronosyltransferase 2B7; drug metabolism, | 99.96 | |
| 1f0k_A | 364 | MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe | 99.89 | |
| 3hbm_A | 282 | UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter je | 99.7 | |
| 2jzc_A | 224 | UDP-N-acetylglucosamine transferase subunit ALG13; | 99.59 | |
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 99.54 | |
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 99.54 | |
| 1v4v_A | 376 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t | 99.46 | |
| 3fro_A | 439 | GLGA glycogen synthase; glycosyltransferase family | 99.46 | |
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 99.44 | |
| 3ot5_A | 403 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.41 | |
| 3dzc_A | 396 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.39 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 99.38 | |
| 1vgv_A | 384 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.36 | |
| 3beo_A | 375 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a | 99.36 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 99.32 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 99.31 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 99.28 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 99.09 | |
| 4hwg_A | 385 | UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc | 99.07 | |
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 98.96 | |
| 1rzu_A | 485 | Glycogen synthase 1; glycosyl-transferase, GT-B fo | 98.86 | |
| 2qzs_A | 485 | Glycogen synthase; glycosyl-transferase, GT-B fold | 98.86 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 98.79 | |
| 2f9f_A | 177 | First mannosyl transferase (WBAZ-1); alpha-beta pr | 98.62 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 98.59 | |
| 2hy7_A | 406 | Glucuronosyltransferase GUMK; glycosyltransferases | 98.56 | |
| 2xci_A | 374 | KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci | 98.51 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 98.08 | |
| 3tov_A | 349 | Glycosyl transferase family 9; structural genomics | 97.88 | |
| 2bfw_A | 200 | GLGA glycogen synthase; glycosyltransferase family | 97.83 | |
| 3q3e_A | 631 | HMW1C-like glycosyltransferase; N-glycosylation; 2 | 97.82 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 97.73 | |
| 1psw_A | 348 | ADP-heptose LPS heptosyltransferase II; structural | 97.44 | |
| 3rhz_A | 339 | GTF3, nucleotide sugar synthetase-like protein; gl | 97.17 | |
| 2gt1_A | 326 | Lipopolysaccharide heptosyltransferase-1; GT-B fol | 96.66 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 95.97 | |
| 3vue_A | 536 | GBSS-I, granule-bound starch synthase 1, chloropla | 93.73 | |
| 2phj_A | 251 | 5'-nucleotidase SURE; SURE protein, putative acid | 92.16 | |
| 1g5t_A | 196 | COB(I)alamin adenosyltransferase; P-loop protein, | 91.71 | |
| 3ty2_A | 261 | 5'-nucleotidase SURE; surviVal protein, phosphatas | 91.55 | |
| 2wqk_A | 251 | 5'-nucleotidase SURE; SURE protein, putative acid | 91.36 | |
| 3zqu_A | 209 | Probable aromatic acid decarboxylase; lyase; HET: | 91.0 | |
| 4dzz_A | 206 | Plasmid partitioning protein PARF; deviant walker | 89.93 | |
| 1uqt_A | 482 | Alpha, alpha-trehalose-phosphate synthase; glycosy | 89.3 | |
| 3qxc_A | 242 | Dethiobiotin synthetase; DTBS, structural genomics | 89.23 | |
| 3nb0_A | 725 | Glycogen [starch] synthase isoform 2; glycogen syn | 88.91 | |
| 3t5t_A | 496 | Putative glycosyltransferase; GTB fold, pseudoglyc | 87.39 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 87.3 | |
| 3fgn_A | 251 | Dethiobiotin synthetase; biotin biosynthesis, BIOD | 86.38 | |
| 1l5x_A | 280 | SurviVal protein E; structural genomics, putative | 86.25 | |
| 3vue_A | 536 | GBSS-I, granule-bound starch synthase 1, chloropla | 86.05 | |
| 1j9j_A | 247 | Stationary phase surviVal protein; SURE protein, u | 85.91 | |
| 3igf_A | 374 | ALL4481 protein; two-domained protein consisting o | 85.77 | |
| 3q0i_A | 318 | Methionyl-tRNA formyltransferase; structural genom | 85.34 | |
| 2e6c_A | 244 | 5'-nucleotidase SURE; SURE protein, cowith mangane | 84.13 | |
| 2iz6_A | 176 | Molybdenum cofactor carrier protein; metal transpo | 83.16 | |
| 1ccw_A | 137 | Protein (glutamate mutase); coenzyme B12, radical | 82.97 | |
| 2v4n_A | 254 | Multifunctional protein SUR E; hydrolase, surviVal | 82.14 | |
| 2xj4_A | 286 | MIPZ; replication, cell division, ATPase, WACA; 1. | 81.79 | |
| 2q5c_A | 196 | NTRC family transcriptional regulator; structural | 81.23 | |
| 2ywr_A | 216 | Phosphoribosylglycinamide formyltransferase; rossm | 80.95 | |
| 3iqw_A | 334 | Tail-anchored protein targeting factor GET3; ATPas | 80.83 | |
| 3dm5_A | 443 | SRP54, signal recognition 54 kDa protein; protein- | 80.07 | |
| 4dim_A | 403 | Phosphoribosylglycinamide synthetase; structural g | 80.04 | |
| 1kjn_A | 157 | MTH0777; hypotethical protein, structural genomics | 80.01 |
| >3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-67 Score=513.43 Aligned_cols=433 Identities=27% Similarity=0.421 Sum_probs=351.2
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHHCC--CEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCCCCCCCcCCCCC
Q 012212 3 RQPHVLVIPYPAQGHVAPLMKLATKIAERA--IKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDGLELQAADRED 80 (468)
Q Consensus 3 ~~~~Il~~~~~~~GH~~p~~~LA~~L~~rG--H~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 80 (468)
++.||+++|+|+.||++|++.||+.|++|| |.|||++++.+...+.+.. .....+++|+.+|+++++......+
T Consensus 12 ~~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~----~~~~~~i~~~~ipdglp~~~~~~~~ 87 (454)
T 3hbf_A 12 NLLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRS----NEFLPNIKYYNVHDGLPKGYVSSGN 87 (454)
T ss_dssp CCCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSS----SCCCTTEEEEECCCCCCTTCCCCSC
T ss_pred CCCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhccc----ccCCCCceEEecCCCCCCCccccCC
Confidence 368999999999999999999999999999 9999999976655543321 0113579999999988765432233
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCcccHHHHHHHhCCceEEEcccchHHHHHHhhhhhHhhcCC
Q 012212 81 PLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVGSALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGI 160 (468)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~ 160 (468)
....+..+...+...+++.++.+.... ..++|+||+|.+..|+..+|+.+|||++.++++++.....+.+++.......
T Consensus 88 ~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~~~~ 166 (454)
T 3hbf_A 88 PREPIFLFIKAMQENFKHVIDEAVAET-GKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREKTG 166 (454)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHHHTCC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHHhhcC
Confidence 444455555555656667666643221 1579999999999999999999999999999999999888888766544210
Q ss_pred CCCCCcccccCCcccccCCCccCcccccCcCCCCCChhHHHHHHHHHHHHHhhccccEEEEcCcccCChhh----hccCC
Q 012212 161 IDPNGFAILNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPA----CDLIP 236 (468)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~----~~~~p 236 (468)
.. .......+..+|+++.+..+++++.+..+ ....+...+.+..+.+..++.+++||+++||++. ++..|
T Consensus 167 ~~----~~~~~~~~~~iPg~p~~~~~dlp~~~~~~--~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~~~~ 240 (454)
T 3hbf_A 167 SK----EVHDVKSIDVLPGFPELKASDLPEGVIKD--IDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNSKFK 240 (454)
T ss_dssp HH----HHTTSSCBCCSTTSCCBCGGGSCTTSSSC--TTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHTTSS
T ss_pred CC----ccccccccccCCCCCCcChhhCchhhccC--CchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHHhcCC
Confidence 00 00111223458999888888888543321 2233555666777788899999999999999863 35568
Q ss_pred CceeeccccCCCCCCCCCCCCCCCCCchhhhhhcccCccEEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCC
Q 012212 237 NILPIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALGLESLQKPFLWVIRQDFMN 316 (468)
Q Consensus 237 ~v~~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~l~~~~~~~~~ 316 (468)
++++|||++...... .+..+.++.+||+.++++++|||+|||....+.+++.+++.+++..+.+++|+++..
T Consensus 241 ~v~~vGPl~~~~~~~-----~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~~~~--- 312 (454)
T 3hbf_A 241 LLLNVGPFNLTTPQR-----KVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFRGD--- 312 (454)
T ss_dssp CEEECCCHHHHSCCS-----CCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEECCSC---
T ss_pred CEEEECCcccccccc-----cccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCc---
Confidence 999999998643321 123467899999998888999999999988889999999999999999999999875
Q ss_pred CcccCCchhHHHHhCCCceEEcccChHHHhcCCCCCceeeccCchhHHHhhhcCCceeccccccchhhhHHHHHHHhhce
Q 012212 317 GSRAKFPDGFIERVSNRGKIVEWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIG 396 (468)
Q Consensus 317 ~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g 396 (468)
....+|+++.++.++|+++++|+||.++|+|+++++||||||+||++|++++|||+|++|+++||+.||+++++.||+|
T Consensus 313 -~~~~lp~~~~~~~~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~G 391 (454)
T 3hbf_A 313 -PKEKLPKGFLERTKTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIG 391 (454)
T ss_dssp -HHHHSCTTHHHHTTTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSE
T ss_pred -chhcCCHhHHhhcCCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCee
Confidence 3346889998999999999999999999999999999999999999999999999999999999999999999855999
Q ss_pred eEeeccCCCccCHHHHHHHHHHHhcCh---HHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHH
Q 012212 397 LQFFADENGIITRQEIQRKVLTLLKND---DIRSNSLKLKEVARKSLLGGGSSFRNFESFISDIK 458 (468)
Q Consensus 397 ~~l~~~~~~~~t~~~l~~ai~~~l~~~---~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 458 (468)
+.++... +++++|+++|+++|+|+ +||+||++|++++++++.+||||.+++++|++++.
T Consensus 392 v~l~~~~---~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~i~ 453 (454)
T 3hbf_A 392 VGVDNGV---LTKESIKKALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVT 453 (454)
T ss_dssp EECGGGS---CCHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHT
T ss_pred EEecCCC---CCHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHh
Confidence 9998766 99999999999999987 79999999999999999999999999999999874
|
| >2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-64 Score=504.07 Aligned_cols=452 Identities=33% Similarity=0.660 Sum_probs=334.0
Q ss_pred CCCCEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCCCCCCCc---CCC
Q 012212 2 SRQPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDGLELQA---ADR 78 (468)
Q Consensus 2 ~~~~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~~~ 78 (468)
++++||+|+|+|+.||++|++.||++|++|||+|||++++.+...+.+...........+++|+.++++++... ...
T Consensus 6 ~~~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~lp~~~~~~~~~ 85 (482)
T 2pq6_A 6 NRKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIPDGLTPMEGDGDVS 85 (482)
T ss_dssp --CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEECCCCC---------
T ss_pred CCCCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCCceEEEECCCCCCCcccccCcc
Confidence 34579999999999999999999999999999999999998776664421000000013799999997665421 122
Q ss_pred CCHHHHHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCcccHHHHHHHhCCceEEEcccchHHHHHHhhhhhHhhc
Q 012212 79 EDPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVGSALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEA 158 (468)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~ 158 (468)
.+...++..+...+.+.++++++.+.......+||+||+|.+..|+..+|+.+|||++.++++++.......++|.....
T Consensus 86 ~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~ 165 (482)
T 2pq6_A 86 QDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVER 165 (482)
T ss_dssp CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHHHHHT
T ss_pred hhHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHHHHHHHhc
Confidence 34445555554567788889998886420015799999999999999999999999999999998777666555654444
Q ss_pred CCCCCCCc--ccc--cCCcccccCCCccCcccccCcCCCCCChhHHHHHHHHHHHHHhhccccEEEEcCcccCChhh---
Q 012212 159 GIIDPNGF--AIL--NDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPA--- 231 (468)
Q Consensus 159 ~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~--- 231 (468)
+..+.... ... .......+|+++.+...+++ .+.............+....+....++.+++||+++||++.
T Consensus 166 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~nt~~~le~~~~~~ 244 (482)
T 2pq6_A 166 GIIPFKDESYLTNGCLETKVDWIPGLKNFRLKDIV-DFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESDVINA 244 (482)
T ss_dssp TCSSCSSGGGGTSSGGGCBCCSSTTCCSCBGGGSC-GGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESSCGGGGHHHHHH
T ss_pred CCCCCccccccccccccCccccCCCCCCCchHHCc-hhhccCCcccHHHHHHHHHHHhhccCCEEEEcChHHHhHHHHHH
Confidence 44332110 000 01112234555545444444 22221111122333344455566789999999999999862
Q ss_pred -hccCCCceeeccccCC-CCCC------CCCCCCCCCCCchhhhhhcccCccEEEEEecccccCCHHHHHHHHHHHHhCC
Q 012212 232 -CDLIPNILPIGPLLAS-NHSG------DLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALGLESLQ 303 (468)
Q Consensus 232 -~~~~p~v~~vGpl~~~-~~~~------~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~a~~~~~ 303 (468)
++..+++++|||++.. .... ......|+.+.++.+|++.++++++|||+|||....+.+.+.+++.++++.+
T Consensus 245 ~~~~~~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~ 324 (482)
T 2pq6_A 245 LSSTIPSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPEQLLEFAWGLANCK 324 (482)
T ss_dssp HHTTCTTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCCHHHHHHHHHHHHHTT
T ss_pred HHHhCCcEEEEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCCcccCCHHHHHHHHHHHHhcC
Confidence 3444899999999763 1110 0001234556678999999888889999999997778888999999999999
Q ss_pred CCEEEEEcCCCCCCcccCCchhHHHHhCCCceEEcccChHHHhcCCCCCceeeccCchhHHHhhhcCCceeccccccchh
Q 012212 304 KPFLWVIRQDFMNGSRAKFPDGFIERVSNRGKIVEWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQY 383 (468)
Q Consensus 304 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~~~DQ~ 383 (468)
.+++|+++.....+....+|+++.++.++|+++++|+||.++|+|+++++||||||+||++||+++|||+|++|+..||+
T Consensus 325 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~Eal~~GvP~i~~P~~~dQ~ 404 (482)
T 2pq6_A 325 KSFLWIIRPDLVIGGSVIFSSEFTNEIADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQP 404 (482)
T ss_dssp CEEEEECCGGGSTTTGGGSCHHHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHH
T ss_pred CcEEEEEcCCccccccccCcHhHHHhcCCCEEEEeecCHHHHhcCCCCCEEEecCCcchHHHHHHcCCCEEecCcccchH
Confidence 99999997541111122378888888899999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHH-HHhhceeEeeccCCCccCHHHHHHHHHHHhcCh---HHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHh
Q 012212 384 QNRNYIC-EAWKIGLQFFADENGIITRQEIQRKVLTLLKND---DIRSNSLKLKEVARKSLLGGGSSFRNFESFISDIKM 459 (468)
Q Consensus 384 ~na~rv~-~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~~---~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 459 (468)
.||++++ + +|+|+.++ .+ +++++|.++|+++|+|+ +||+||+++++++++++.+||||.+++++|+++++.
T Consensus 405 ~na~~~~~~-~G~g~~l~-~~---~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~~~ 479 (482)
T 2pq6_A 405 TDCRFICNE-WEIGMEID-TN---VKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKVIKDVLL 479 (482)
T ss_dssp HHHHHHHHT-SCCEEECC-SS---CCHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHH-hCEEEEEC-CC---CCHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHh
Confidence 9999997 6 59999998 55 99999999999999999 699999999999999999999999999999998753
|
| >2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-61 Score=481.19 Aligned_cols=437 Identities=28% Similarity=0.443 Sum_probs=329.8
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHHC-CCEEEEEECCc--chHHHHHhhhhhccCCCCCeEEEEcCCCCCCCcCCCC
Q 012212 3 RQPHVLVIPYPAQGHVAPLMKLATKIAER-AIKVTVVNTQF--IHKKIIASLQEKAEDSSSQIKLVTIPDGLELQAADRE 79 (468)
Q Consensus 3 ~~~~Il~~~~~~~GH~~p~~~LA~~L~~r-GH~Vt~~~~~~--~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 79 (468)
+++||+++|+++.||++|++.||++|++| ||+|||++++. +...+.+... ....+++|+.++...........
T Consensus 5 ~~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~~----~~~~~i~~~~l~~~~~~~~~~~~ 80 (480)
T 2vch_A 5 KTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLD----SLPSSISSVFLPPVDLTDLSSST 80 (480)
T ss_dssp -CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC-----CCTTEEEEECCCCCCTTSCTTC
T ss_pred CCcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhcc----ccCCCceEEEcCCCCCCCCCCch
Confidence 45899999999999999999999999998 99999999987 4455544210 11257999999865321111122
Q ss_pred CHHHHHHHHHHHhhHHHHHHHHHHhhCCCCCCc-eEEEecCCcccHHHHHHHhCCceEEEcccchHHHHHHhhhhhHhhc
Q 012212 80 DPLKLGESVARAMRGCLRDLIEKINQSNDCEPI-RCVIADVTVGSALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEA 158 (468)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~p-Dlvi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~ 158 (468)
++...+......+.+.++++++.+... .++ |+||+|.+..|+..+|+.+|||++.+++++........++|.....
T Consensus 81 ~~~~~~~~~~~~~~~~l~~ll~~~~~~---~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~ 157 (480)
T 2vch_A 81 RIESRISLTVTRSNPELRKVFDSFVEG---GRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDET 157 (480)
T ss_dssp CHHHHHHHHHHTTHHHHHHHHHHHHHT---TCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHhhhHHHHHHHHHhccC---CCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHHHhc
Confidence 343333334455667788888776421 468 9999999999999999999999999999998877777666654432
Q ss_pred CCCCCCCcccccCCcccccCCCccCcccccCcCCCCCChhHHHHHHHHHHHHHhhccccEEEEcCcccCChhhhc-----
Q 012212 159 GIIDPNGFAILNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACD----- 233 (468)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~~~----- 233 (468)
...+ +. .. ......|+++++...+++..+. ... ...+..+......+...+.+++|++.++|.+...
T Consensus 158 ~~~~---~~-~~-~~~~~~Pg~~p~~~~~l~~~~~-~~~--~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l~~~ 229 (480)
T 2vch_A 158 VSCE---FR-EL-TEPLMLPGCVPVAGKDFLDPAQ-DRK--DDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEP 229 (480)
T ss_dssp CCSC---GG-GC-SSCBCCTTCCCBCGGGSCGGGS-CTT--SHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHHSC
T ss_pred CCCc---cc-cc-CCcccCCCCCCCChHHCchhhh-cCC--chHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHHHhc
Confidence 2111 00 00 1112456666555555553221 111 1233334445556778889999999999975321
Q ss_pred --cCCCceeeccccCCCCCCCCCCCCCCCCCchhhhhhcccCccEEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEc
Q 012212 234 --LIPNILPIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALGLESLQKPFLWVIR 311 (468)
Q Consensus 234 --~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~l~~~~ 311 (468)
..+++++|||++...... ..+..+.++.+||+.++++++|||||||....+.+++.+++.+++.++.+++|+++
T Consensus 230 ~~~~~~v~~vGpl~~~~~~~----~~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~ 305 (480)
T 2vch_A 230 GLDKPPVYPVGPLVNIGKQE----AKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIR 305 (480)
T ss_dssp CTTCCCEEECCCCCCCSCSC----C-----CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCCCcEEEEeccccccccc----cCccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCCcEEEEEC
Confidence 137899999998753211 01235678999999988888999999999878899999999999999999999998
Q ss_pred CCCCC-----------Cc-ccCCchhHHHHhCCCceEE-cccChHHHhcCCCCCceeeccCchhHHHhhhcCCceecccc
Q 012212 312 QDFMN-----------GS-RAKFPDGFIERVSNRGKIV-EWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPY 378 (468)
Q Consensus 312 ~~~~~-----------~~-~~~~~~~~~~~~~~nv~~~-~~~p~~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~ 378 (468)
..... .. ...+|+++.+++.++.+++ +|+||.+||+|++|++||||||+||++||+++|||||++|+
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~P~ 385 (480)
T 2vch_A 306 SPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPL 385 (480)
T ss_dssp CCCSSTTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCC
T ss_pred CccccccccccccccccchhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCEEeccc
Confidence 65211 11 1357888888887777777 59999999999999999999999999999999999999999
Q ss_pred ccchhhhHHHH-HHHhhceeEeeccCCCccCHHHHHHHHHHHhc---ChHHHHHHHHHHHHHHHHhcCCCchHHHHHHHH
Q 012212 379 FSDQYQNRNYI-CEAWKIGLQFFADENGIITRQEIQRKVLTLLK---NDDIRSNSLKLKEVARKSLLGGGSSFRNFESFI 454 (468)
Q Consensus 379 ~~DQ~~na~rv-~~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~---~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~ 454 (468)
+.||+.||+++ ++ +|+|+.++..+++.+|+++|+++|+++|+ +++||+||+++++++++++.+||++.+++++||
T Consensus 386 ~~DQ~~na~~l~~~-~G~g~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~~~~~v 464 (480)
T 2vch_A 386 YAEQKMNAVLLSED-IRAALRPRAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVA 464 (480)
T ss_dssp STTHHHHHHHHHHT-TCCEECCCCCTTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHH
T ss_pred cccchHHHHHHHHH-hCeEEEeecccCCccCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHH
Confidence 99999999997 67 69999998763345999999999999998 778999999999999999999999999999999
Q ss_pred HHHHh
Q 012212 455 SDIKM 459 (468)
Q Consensus 455 ~~~~~ 459 (468)
+++++
T Consensus 465 ~~~~~ 469 (480)
T 2vch_A 465 LKWKA 469 (480)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99876
|
| >2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-62 Score=479.74 Aligned_cols=437 Identities=26% Similarity=0.455 Sum_probs=328.6
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHHCCCE--EEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCCCCCCCcCCCCC
Q 012212 3 RQPHVLVIPYPAQGHVAPLMKLATKIAERAIK--VTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDGLELQAADRED 80 (468)
Q Consensus 3 ~~~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~--Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 80 (468)
+++||+++|+|+.||++|++.||+.|++|||+ |||++++.+...+.+.... ....+++|+.++++++........
T Consensus 6 ~~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~~---~~~~~i~~~~i~~glp~~~~~~~~ 82 (456)
T 2c1x_A 6 TNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMH---TMQCNIKSYDISDGVPEGYVFAGR 82 (456)
T ss_dssp -CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC----------CTTEEEEECCCCCCTTCCCCCC
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhccccc---cCCCceEEEeCCCCCCCcccccCC
Confidence 46899999999999999999999999999755 5888887554444332100 012579999998876654211223
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCcccHHHHHHHhCCceEEEcccchHHHHHHhhhhhHhhc-C
Q 012212 81 PLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVGSALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEA-G 159 (468)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~-~ 159 (468)
.......+...+...++++++.+.+.. ..+||+||+|.++.|+..+|+.+|||++.++++++.......+.+..... +
T Consensus 83 ~~~~~~~~~~~~~~~~~~~l~~l~~~~-~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~ 161 (456)
T 2c1x_A 83 PQEDIELFTRAAPESFRQGMVMAVAET-GRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIG 161 (456)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHH-TCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHHHHHC
T ss_pred hHHHHHHHHHHhHHHHHHHHHHHHhcc-CCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHHHHhccC
Confidence 344455555555556777776544221 15799999999999999999999999999999988776655544432211 2
Q ss_pred CCCCCCcccccCCcccccCCCccCcccccCcCCCCCChhHHHHHHHHHHHHHhhccccEEEEcCcccCChhh----hccC
Q 012212 160 IIDPNGFAILNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPA----CDLI 235 (468)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~----~~~~ 235 (468)
..... . .....+..+|+++.++..+++..+. .......+.....+..+....++.+++|++++||++. ++..
T Consensus 162 ~~~~~--~-~~~~~~~~~pg~~~~~~~~lp~~~~-~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~~~~~ 237 (456)
T 2c1x_A 162 VSGIQ--G-REDELLNFIPGMSKVRFRDLQEGIV-FGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLKSKL 237 (456)
T ss_dssp SSCCT--T-CTTCBCTTSTTCTTCBGGGSCTTTS-SSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHHHS
T ss_pred Ccccc--c-ccccccccCCCCCcccHHhCchhhc-CCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHHHHHHHHhcC
Confidence 11100 0 1112233567777666666653222 1111112223333444556789999999999999863 3445
Q ss_pred CCceeeccccCCCCCCCCCCCCCCCCCchhhhhhcccCccEEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEcCCCC
Q 012212 236 PNILPIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALGLESLQKPFLWVIRQDFM 315 (468)
Q Consensus 236 p~v~~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~l~~~~~~~~ 315 (468)
|++++|||++...... .+..+.++.+|++.++++++|||++||....+.+++..++.+++..+.+++|+++..
T Consensus 238 ~~~~~vGpl~~~~~~~-----~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~-- 310 (456)
T 2c1x_A 238 KTYLNIGPFNLITPPP-----VVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSLRDK-- 310 (456)
T ss_dssp SCEEECCCHHHHC--------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEEECCGG--
T ss_pred CCEEEecCcccCcccc-----cccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcCCeEEEEECCc--
Confidence 8999999998643211 022356789999988888899999999977788999999999999999999999765
Q ss_pred CCcccCCchhHHHHhCCCceEEcccChHHHhcCCCCCceeeccCchhHHHhhhcCCceeccccccchhhhHHHHHHHhhc
Q 012212 316 NGSRAKFPDGFIERVSNRGKIVEWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKI 395 (468)
Q Consensus 316 ~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~ 395 (468)
....+|+++.++.++|+++++|+||.++|.|+++++||||||+||++||+++|||+|++|++.||+.||+++++.||+
T Consensus 311 --~~~~l~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~ 388 (456)
T 2c1x_A 311 --ARVHLPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEI 388 (456)
T ss_dssp --GGGGSCTTHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCC
T ss_pred --chhhCCHHHHhhcCCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCe
Confidence 334578888888899999999999999999999999999999999999999999999999999999999999994599
Q ss_pred eeEeeccCCCccCHHHHHHHHHHHhcCh---HHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHh
Q 012212 396 GLQFFADENGIITRQEIQRKVLTLLKND---DIRSNSLKLKEVARKSLLGGGSSFRNFESFISDIKM 459 (468)
Q Consensus 396 g~~l~~~~~~~~t~~~l~~ai~~~l~~~---~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 459 (468)
|+.++..+ ++.++|+++|+++|+|+ +||+||+++++++++++.+||||.+++++||+++.+
T Consensus 389 g~~l~~~~---~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~~~~ 452 (456)
T 2c1x_A 389 GVRIEGGV---FTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVSK 452 (456)
T ss_dssp EEECGGGS---CCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHTS
T ss_pred EEEecCCC---cCHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHHh
Confidence 99998766 99999999999999998 799999999999999999999999999999998843
|
| >2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-59 Score=460.18 Aligned_cols=428 Identities=27% Similarity=0.450 Sum_probs=323.3
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHHC--CCEEEEEECCcch-----HHHHHhhhhhccCCCCCeEEEEcCCCCCCCcC
Q 012212 4 QPHVLVIPYPAQGHVAPLMKLATKIAER--AIKVTVVNTQFIH-----KKIIASLQEKAEDSSSQIKLVTIPDGLELQAA 76 (468)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~~~LA~~L~~r--GH~Vt~~~~~~~~-----~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 76 (468)
++||+++|+|+.||++|++.||+.|++| ||+|||++++.+. ..+.... ....+++|+.+|++..+...
T Consensus 9 ~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~-----~~~~~i~~~~lp~~~~~~~~ 83 (463)
T 2acv_A 9 NSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVL-----ASQPQIQLIDLPEVEPPPQE 83 (463)
T ss_dssp CEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHH-----CSCTTEEEEECCCCCCCCGG
T ss_pred CCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhcc-----cCCCCceEEECCCCCCCccc
Confidence 5799999999999999999999999999 9999999998763 2232211 12257999999976311110
Q ss_pred CCCCHHHHHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCcccHHHHHHHhCCceEEEcccchHHHHHHhhhhhHh
Q 012212 77 DREDPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVGSALEVAESMGIARAAVVPFGPGSLALSLQFPKLL 156 (468)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~ 156 (468)
...+....+......+.+.++++++.+. ..+||+||+|.+..|+..+|+.+|||++.+++++........++|...
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~ll~~~~----~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 159 (463)
T 2acv_A 84 LLKSPEFYILTFLESLIPHVKATIKTIL----SNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQ 159 (463)
T ss_dssp GGGSHHHHHHHHHHHTHHHHHHHHHHHC----CTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSC
T ss_pred ccCCccHHHHHHHHhhhHHHHHHHHhcc----CCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhhc
Confidence 0111111122334556667888887761 157999999999999999999999999999999888777666555432
Q ss_pred hcCCCCCCCcccccCCc---ccccCCC-ccCcccccCcCCCCCChhHHHHHHHHHHHHHhhccccEEEEcCcccCChhhh
Q 012212 157 EAGIIDPNGFAILNDGL---ISLSDEI-PAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPAC 232 (468)
Q Consensus 157 ~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~~ 232 (468)
..+... . ... ....|++ +.+...+++..+.. + ...+..+......+..++.+++||+++||.+..
T Consensus 160 ~~~~~~------~-~~~~~~~~~~pg~~~~~~~~~l~~~~~~-~---~~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~ 228 (463)
T 2acv_A 160 IEEVFD------D-SDRDHQLLNIPGISNQVPSNVLPDACFN-K---DGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSI 228 (463)
T ss_dssp TTCCCC------C-SSGGGCEECCTTCSSCEEGGGSCHHHHC-T---TTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHH
T ss_pred ccCCCC------C-ccccCceeECCCCCCCCChHHCchhhcC-C---chHHHHHHHHHHhcccCCEEEECCHHHHhHHHH
Confidence 111000 0 011 2345666 55444444421111 1 113334445556677889999999999997643
Q ss_pred cc-------CCCceeeccccCCCCCCCCCCCCCCCCCchhhhhhcccCccEEEEEecccc-cCCHHHHHHHHHHHHhCCC
Q 012212 233 DL-------IPNILPIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVA-VLSQQQFAELALGLESLQK 304 (468)
Q Consensus 233 ~~-------~p~v~~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~-~~~~~~~~~~~~a~~~~~~ 304 (468)
.+ .+++++|||++........ ...|..+.++.+|++.++++++|||+|||.. ..+.+++.+++.+++..+.
T Consensus 229 ~~l~~~~~p~~~v~~vGpl~~~~~~~~~-~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~ 307 (463)
T 2acv_A 229 DALYDHDEKIPPIYAVGPLLDLKGQPNP-KLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGV 307 (463)
T ss_dssp HHHHHHCTTSCCEEECCCCCCSSCCCBT-TBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTC
T ss_pred HHHHhccccCCcEEEeCCCccccccccc-ccccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCCC
Confidence 22 5799999999865320100 0002345678999999888889999999998 7788899999999999999
Q ss_pred CEEEEEcCCCCCCcccCCchhHHHHh--CCCceEEcccChHHHhcCCCCCceeeccCchhHHHhhhcCCceeccccccch
Q 012212 305 PFLWVIRQDFMNGSRAKFPDGFIERV--SNRGKIVEWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQ 382 (468)
Q Consensus 305 ~~l~~~~~~~~~~~~~~~~~~~~~~~--~~nv~~~~~~p~~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~~~DQ 382 (468)
+++|+++.. ...+|+++.++. ++|+++++|+||.++|.|+++++||||||+||++||+++|||+|++|++.||
T Consensus 308 ~~l~~~~~~-----~~~l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~~dQ 382 (463)
T 2acv_A 308 RFLWSNSAE-----KKVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQ 382 (463)
T ss_dssp EEEEECCCC-----GGGSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTH
T ss_pred cEEEEECCC-----cccCChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccchhhh
Confidence 999999753 124778887777 8899999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHH-HHHhhceeEee-ccCCC--ccCHHHHHHHHHHHhc-ChHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHH
Q 012212 383 YQNRNYI-CEAWKIGLQFF-ADENG--IITRQEIQRKVLTLLK-NDDIRSNSLKLKEVARKSLLGGGSSFRNFESFISDI 457 (468)
Q Consensus 383 ~~na~rv-~~~lG~g~~l~-~~~~~--~~t~~~l~~ai~~~l~-~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 457 (468)
+.||+++ ++ +|+|+.+. ..+.+ .++.++|.++|+++|+ +++||+||+++++++++++.+||||.+++++||+++
T Consensus 383 ~~Na~~lv~~-~g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~ 461 (463)
T 2acv_A 383 QLNAFRLVKE-WGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKDSIVHKKVQEMKEMSRNAVVDGGSSLISVGKLIDDI 461 (463)
T ss_dssp HHHHHHHHHT-SCCEEESCSSCCTTCCCCCHHHHHHHHHHHTCTTCTHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-cCeEEEEecccCCCCccccHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHh
Confidence 9999995 78 69999993 11112 3899999999999997 578999999999999999999999999999999988
Q ss_pred H
Q 012212 458 K 458 (468)
Q Consensus 458 ~ 458 (468)
+
T Consensus 462 ~ 462 (463)
T 2acv_A 462 T 462 (463)
T ss_dssp H
T ss_pred c
Confidence 5
|
| >2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-47 Score=376.46 Aligned_cols=396 Identities=17% Similarity=0.202 Sum_probs=272.7
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCCCCCCCcC----
Q 012212 1 MSRQPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDGLELQAA---- 76 (468)
Q Consensus 1 m~~~~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~---- 76 (468)
|++|+||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+.+. +++|+.++..++....
T Consensus 9 ~m~~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~~----------g~~~~~~~~~~~~~~~~~~~ 78 (424)
T 2iya_A 9 SVTPRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKAA----------GATPVVYDSILPKESNPEES 78 (424)
T ss_dssp --CCCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH----------TCEEEECCCCSCCTTCTTCC
T ss_pred CcccceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHhC----------CCEEEecCccccccccchhh
Confidence 45678999999999999999999999999999999999999988888774 4788888765432210
Q ss_pred CCCCHHHHHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCcccHHHHHHHhCCceEEEcccchHHHHHHhhhhhHh
Q 012212 77 DREDPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVGSALEVAESMGIARAAVVPFGPGSLALSLQFPKLL 156 (468)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~ 156 (468)
...+....+..+........+++.+.+++ .+||+||+|.+..|+..+|+.+|||++.+++.+......... +...
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~-~~~~ 153 (424)
T 2iya_A 79 WPEDQESAMGLFLDEAVRVLPQLEDAYAD----DRPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGFEED-VPAV 153 (424)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHHHHHHTTT----SCCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTHHHH-SGGG
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHhc----cCCCEEEEcCcccHHHHHHHhcCCCEEEEecccccccccccc-cccc
Confidence 12233344444444444444555555443 679999999988899999999999999998765411100000 0000
Q ss_pred hcCCCCCCCcccccCCcccccCCCccCcccccCcCCCCCChhHHHHHHHHHHHHHh----------hccccEEEEcCccc
Q 012212 157 EAGIIDPNGFAILNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQA----------VKISNWIINNSVYE 226 (468)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~l~~~~~~ 226 (468)
..+..+. +.+ ...|... .... .+.........+...+.+.... ...++.+++++++.
T Consensus 154 ~~~~~~~-~~~-------~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~ 220 (424)
T 2iya_A 154 QDPTADR-GEE-------AAAPAGT----GDAE-EGAEAEDGLVRFFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRT 220 (424)
T ss_dssp SCCCC----------------------------------HHHHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTT
T ss_pred ccccccc-ccc-------ccccccc----ccch-hhhccchhHHHHHHHHHHHHHHcCCCCCHHHhccCCCcEEEEcchh
Confidence 0000000 000 0000000 0000 0000000011111111121111 12578899999999
Q ss_pred CChhhhccCCCceeeccccCCCCCCCCCCCCCCCCCchhhhhhcccCccEEEEEecccccCCHHHHHHHHHHHHhCCCCE
Q 012212 227 LDSPACDLIPNILPIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALGLESLQKPF 306 (468)
Q Consensus 227 le~~~~~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~ 306 (468)
|+++..++++++++|||+..... +..+|++..+++++|||++||......+++..+++++++.+.++
T Consensus 221 l~~~~~~~~~~~~~vGp~~~~~~-------------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~ 287 (424)
T 2iya_A 221 FQIKGDTVGDNYTFVGPTYGDRS-------------HQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDWHV 287 (424)
T ss_dssp TSTTGGGCCTTEEECCCCCCCCG-------------GGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCSSEE
T ss_pred hCCCccCCCCCEEEeCCCCCCcc-------------cCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCCcEE
Confidence 99875667889999999764321 01245655556789999999987666788999999999888888
Q ss_pred EEEEcCCCCCCcccCCchhHHHHhCCCceEEcccChHHHhcCCCCCceeeccCchhHHHhhhcCCceeccccccchhhhH
Q 012212 307 LWVIRQDFMNGSRAKFPDGFIERVSNRGKIVEWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNR 386 (468)
Q Consensus 307 l~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~~~DQ~~na 386 (468)
+|.++.... .+.+ +..++|+++.+|+||.++|.|+++ ||||||+||+.||+++|||+|++|...||+.||
T Consensus 288 ~~~~g~~~~-------~~~~-~~~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na 357 (424)
T 2iya_A 288 VLSVGRFVD-------PADL-GEVPPNVEVHQWVPQLDILTKASA--FITHAGMGSTMEALSNAVPMVAVPQIAEQTMNA 357 (424)
T ss_dssp EEECCTTSC-------GGGG-CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHH
T ss_pred EEEECCcCC-------hHHh-ccCCCCeEEecCCCHHHHHhhCCE--EEECCchhHHHHHHHcCCCEEEecCccchHHHH
Confidence 888775411 1111 123678999999999999987765 999999999999999999999999999999999
Q ss_pred HHHHHHhhceeEeeccCCCccCHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHH
Q 012212 387 NYICEAWKIGLQFFADENGIITRQEIQRKVLTLLKNDDIRSNSLKLKEVARKSLLGGGSSFRNFESFIS 455 (468)
Q Consensus 387 ~rv~~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 455 (468)
+++++ +|+|+.++.++ ++.++|.++|+++|+|++||++++++++++++ .+++.+.++.+.+
T Consensus 358 ~~l~~-~g~g~~~~~~~---~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~ 418 (424)
T 2iya_A 358 ERIVE-LGLGRHIPRDQ---VTAEKLREAVLAVASDPGVAERLAAVRQEIRE----AGGARAAADILEG 418 (424)
T ss_dssp HHHHH-TTSEEECCGGG---CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHT----SCHHHHHHHHHHH
T ss_pred HHHHH-CCCEEEcCcCC---CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHh----cCcHHHHHHHHHH
Confidence 99999 59999998776 89999999999999999999999999999987 4444444444433
|
| >4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-45 Score=355.24 Aligned_cols=342 Identities=17% Similarity=0.211 Sum_probs=227.6
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCCCCCCCcC------
Q 012212 3 RQPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDGLELQAA------ 76 (468)
Q Consensus 3 ~~~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~------ 76 (468)
+.|||||+++|+.||++|+++||++|++|||+|||++++.+.... . .++.+..+.........
T Consensus 21 ~~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~~~-~----------~g~~~~~~~~~~~~~~~~~~~~~ 89 (400)
T 4amg_A 21 QSMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRAVA-E----------AGLCAVDVSPGVNYAKLFVPDDT 89 (400)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHHHH-T----------TTCEEEESSTTCCSHHHHSCCC-
T ss_pred CCCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhhHH-h----------cCCeeEecCCchhHhhhcccccc
Confidence 569999999999999999999999999999999999998876643 3 45666666433221100
Q ss_pred --------CCCCHHHHHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCcccHHHHHHHhCCceEEEcccchHHHHH
Q 012212 77 --------DREDPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVGSALEVAESMGIARAAVVPFGPGSLAL 148 (468)
Q Consensus 77 --------~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~ 148 (468)
...........+.......+.++++.++. .+||+||+|.+..++..+|+.+|||++.+...+......
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~~~ 165 (400)
T 4amg_A 90 DVTDPMHSEGLGEGFFAEMFARVSAVAVDGALRTARS----WRPDLVVHTPTQGAGPLTAAALQLPCVELPLGPADSEPG 165 (400)
T ss_dssp -----------CHHHHHHHHHHHHHHHHHHHHHHHHH----HCCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCCHH
T ss_pred ccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHh----cCCCEEEECcchHHHHHHHHHcCCCceeecccccccccc
Confidence 11111222233333344445555555555 569999999999999999999999999876544322111
Q ss_pred HhhhhhHhhcCCCCCCCcccccCCcccccCCCccCcccccCcCCCCCChhHHHHHHHHHHHHHhh-----ccccEEEEcC
Q 012212 149 SLQFPKLLEAGIIDPNGFAILNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAV-----KISNWIINNS 223 (468)
Q Consensus 149 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~ 223 (468)
.... .. ....+..+.. ......+...
T Consensus 166 ~~~~---~~----------------------------------------------~~l~~~~~~~~~~~~~~~~~~~~~~ 196 (400)
T 4amg_A 166 LGAL---IR----------------------------------------------RAMSKDYERHGVTGEPTGSVRLTTT 196 (400)
T ss_dssp HHHH---HH----------------------------------------------HHTHHHHHHTTCCCCCSCEEEEECC
T ss_pred hhhH---HH----------------------------------------------HHHHHHHHHhCCCcccccchhhccc
Confidence 1000 00 0000000000 0111111111
Q ss_pred cccCCh--hhhccCCCceeeccccCCCCCCCCCCCCCCCCCchhhhhhcccCccEEEEEecccccCC--HHHHHHHHHHH
Q 012212 224 VYELDS--PACDLIPNILPIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLS--QQQFAELALGL 299 (468)
Q Consensus 224 ~~~le~--~~~~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~--~~~~~~~~~a~ 299 (468)
.+.+.. +.....+..+..++.... ....+.+|++..+++++|||++||..... .+.+..+++++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l 264 (400)
T 4amg_A 197 PPSVEALLPEDRRSPGAWPMRYVPYN------------GGAVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEV 264 (400)
T ss_dssp CHHHHHTSCGGGCCTTCEECCCCCCC------------CCEECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHG
T ss_pred CchhhccCcccccCCcccCccccccc------------ccccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHh
Confidence 111110 101111222222222111 22333467888888899999999984433 35788899999
Q ss_pred HhCCCCEEEEEcCCCCCCcccCCchhHHHHhCCCceEEcccChHHHhcCCCCCceeeccCchhHHHhhhcCCceeccccc
Q 012212 300 ESLQKPFLWVIRQDFMNGSRAKFPDGFIERVSNRGKIVEWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYF 379 (468)
Q Consensus 300 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~~ 379 (468)
.+.+.+++|..++. ..... . ..++|+++.+|+||.++|.|+++ ||||||+||+.||+++|||+|++|+.
T Consensus 265 ~~~~~~~v~~~~~~----~~~~~-~----~~~~~v~~~~~~p~~~lL~~~~~--~v~h~G~~s~~Eal~~GvP~v~~P~~ 333 (400)
T 4amg_A 265 ADVDAEFVLTLGGG----DLALL-G----ELPANVRVVEWIPLGALLETCDA--IIHHGGSGTLLTALAAGVPQCVIPHG 333 (400)
T ss_dssp GGSSSEEEEECCTT----CCCCC-C----CCCTTEEEECCCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCC-
T ss_pred hccCceEEEEecCc----ccccc-c----cCCCCEEEEeecCHHHHhhhhhh--eeccCCccHHHHHHHhCCCEEEecCc
Confidence 99999999988765 11111 1 23788899999999999977655 99999999999999999999999999
Q ss_pred cchhhhHHHHHHHhhceeEeeccCCCccCHHHHHHHHHHHhcChHHHHHHHHHHHHHHHH
Q 012212 380 SDQYQNRNYICEAWKIGLQFFADENGIITRQEIQRKVLTLLKNDDIRSNSLKLKEVARKS 439 (468)
Q Consensus 380 ~DQ~~na~rv~~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~~~~r~~a~~l~~~~~~~ 439 (468)
.||+.||+++++ +|+|+.++..+ .+++ +|+++|+|++||+||+++++++++.
T Consensus 334 ~dQ~~na~~v~~-~G~g~~l~~~~---~~~~----al~~lL~d~~~r~~a~~l~~~~~~~ 385 (400)
T 4amg_A 334 SYQDTNRDVLTG-LGIGFDAEAGS---LGAE----QCRRLLDDAGLREAALRVRQEMSEM 385 (400)
T ss_dssp --CHHHHHHHHH-HTSEEECCTTT---CSHH----HHHHHHHCHHHHHHHHHHHHHHHTS
T ss_pred ccHHHHHHHHHH-CCCEEEcCCCC---chHH----HHHHHHcCHHHHHHHHHHHHHHHcC
Confidence 999999999999 59999998766 6654 7788999999999999999999883
|
| >3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-43 Score=343.47 Aligned_cols=377 Identities=14% Similarity=0.164 Sum_probs=269.9
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCCCCCCCcC----CC
Q 012212 3 RQPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDGLELQAA----DR 78 (468)
Q Consensus 3 ~~~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~----~~ 78 (468)
+||||+|++.++.||++|+++||++|.++||+|+|++++.+.+.+.+ .++.+..++........ ..
T Consensus 19 ~m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~----------~G~~~~~~~~~~~~~~~~~~~~~ 88 (415)
T 3rsc_A 19 HMAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRA----------AGATVVPYQSEIIDADAAEVFGS 88 (415)
T ss_dssp CCCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHH----------TTCEEEECCCSTTTCCHHHHHHS
T ss_pred cCCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHh----------cCCEEEeccccccccccchhhcc
Confidence 58999999999999999999999999999999999999998888887 56888888754432210 01
Q ss_pred CCHHHHHHH-HHHHhhHHHHHHHHHHhhCCCCCCceEEEec-CCcccHHHHHHHhCCceEEEcccchHHHHHHhhhhhHh
Q 012212 79 EDPLKLGES-VARAMRGCLRDLIEKINQSNDCEPIRCVIAD-VTVGSALEVAESMGIARAAVVPFGPGSLALSLQFPKLL 156 (468)
Q Consensus 79 ~~~~~~~~~-~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D-~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~ 156 (468)
.+....+.. +.......++.+.+.+++ .+||+||+| ....++..+|+.+|||++.+.+.......... .+...
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~~-~~~~~ 163 (415)
T 3rsc_A 89 DDLGVRPHLMYLRENVSVLRATAEALDG----DVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNEHYSF-SQDMV 163 (415)
T ss_dssp SSSCHHHHHHHHHHHHHHHHHHHHHHSS----SCCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCSSCCH-HHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHhc----cCCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccCcccc-ccccc
Confidence 111122222 334444445556655554 679999999 77778999999999999998754321100000 00000
Q ss_pred hcCCCCCCCcccccCCcccccCCCccCcccccCcCCCCCChhHHHHHHHHHHHHHhh----------ccc-cEEEEcCcc
Q 012212 157 EAGIIDPNGFAILNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAV----------KIS-NWIINNSVY 225 (468)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~-~~~l~~~~~ 225 (468)
.... ...+.........+.+..... ... +..+....+
T Consensus 164 ~~~~--------------------------------~~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~ 211 (415)
T 3rsc_A 164 TLAG--------------------------------TIDPLDLPVFRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPK 211 (415)
T ss_dssp HHHT--------------------------------CCCGGGCHHHHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCT
T ss_pred cccc--------------------------------cCChhhHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCc
Confidence 0000 000000001111111111111 122 888889999
Q ss_pred cCChhhhccCCCceeeccccCCCCCCCCCCCCCCCCCchhhhhhcccCccEEEEEecccccCCHHHHHHHHHHHHhCCCC
Q 012212 226 ELDSPACDLIPNILPIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALGLESLQKP 305 (468)
Q Consensus 226 ~le~~~~~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~a~~~~~~~ 305 (468)
.++++...++.++.++||....... ..+|....+++++||+++||......+.+..+++++.+.+.+
T Consensus 212 ~~~~~~~~~~~~~~~vGp~~~~~~~-------------~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~ 278 (415)
T 3rsc_A 212 AFQIAGDTFDDRFVFVGPCFDDRRF-------------LGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQPWH 278 (415)
T ss_dssp TTSTTGGGCCTTEEECCCCCCCCGG-------------GCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSSCE
T ss_pred ccCCCcccCCCceEEeCCCCCCccc-------------CcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCCcE
Confidence 9988755667789999997654221 123444445667999999998766778899999999988888
Q ss_pred EEEEEcCCCCCCcccCCchhHHHHhCCCceEEcccChHHHhcCCCCCceeeccCchhHHHhhhcCCceeccccccchhhh
Q 012212 306 FLWVIRQDFMNGSRAKFPDGFIERVSNRGKIVEWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQN 385 (468)
Q Consensus 306 ~l~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~~~DQ~~n 385 (468)
+++.++.... .+. .+..++|+++.+|+|+.++|.++++ ||||||+||+.||+++|+|+|++|...||+.|
T Consensus 279 ~v~~~g~~~~-------~~~-l~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~ 348 (415)
T 3rsc_A 279 VVMTLGGQVD-------PAA-LGDLPPNVEAHRWVPHVKVLEQATV--CVTHGGMGTLMEALYWGRPLVVVPQSFDVQPM 348 (415)
T ss_dssp EEEECTTTSC-------GGG-GCCCCTTEEEESCCCHHHHHHHEEE--EEESCCHHHHHHHHHTTCCEEECCCSGGGHHH
T ss_pred EEEEeCCCCC-------hHH-hcCCCCcEEEEecCCHHHHHhhCCE--EEECCcHHHHHHHHHhCCCEEEeCCcchHHHH
Confidence 8888775411 111 1123678999999999999977655 99999999999999999999999999999999
Q ss_pred HHHHHHHhhceeEeeccCCCccCHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHH
Q 012212 386 RNYICEAWKIGLQFFADENGIITRQEIQRKVLTLLKNDDIRSNSLKLKEVARKSLLGGGSSFRNFESFISDI 457 (468)
Q Consensus 386 a~rv~~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 457 (468)
|.++++. |+|+.++.++ ++.++|.++|+++|+|++++++++++++++.+ .+++.+.++.+.+.+
T Consensus 349 a~~l~~~-g~g~~~~~~~---~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~~ 412 (415)
T 3rsc_A 349 ARRVDQL-GLGAVLPGEK---ADGDTLLAAVGAVAADPALLARVEAMRGHVRR----AGGAARAADAVEAYL 412 (415)
T ss_dssp HHHHHHH-TCEEECCGGG---CCHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH----SCHHHHHHHHHHHHH
T ss_pred HHHHHHc-CCEEEcccCC---CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHh----cCHHHHHHHHHHHHh
Confidence 9999995 9999998877 89999999999999999999999999999988 555555555554444
|
| >1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-43 Score=346.08 Aligned_cols=367 Identities=14% Similarity=0.144 Sum_probs=248.6
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCCCCCCCcCC-CCCHHH
Q 012212 5 PHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDGLELQAAD-REDPLK 83 (468)
Q Consensus 5 ~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~ 83 (468)
|||+|++.++.||++|+++||++|++|||+|+|++++.+.+.+.+ .+++|+.++......... ......
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~----------~g~~~~~i~~~~~~~~~~~~~~~~~ 70 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAE----------VGVPHVPVGPSARAPIQRAKPLTAE 70 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH----------TTCCEEECCC-------CCSCCCHH
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHH----------cCCeeeeCCCCHHHHhhcccccchH
Confidence 699999999999999999999999999999999999998777776 568888887653211001 111111
Q ss_pred HHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecC-Cccc--HHHHHHHhCCceEEEcccchHHHHHHhhhhhHhhcCC
Q 012212 84 LGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADV-TVGS--ALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGI 160 (468)
Q Consensus 84 ~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~-~~~~--~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~ 160 (468)
. +...+......+++.+.... .+||+||+|. +..+ +..+|+.+|||++.+.+.+..... ..
T Consensus 71 ~---~~~~~~~~~~~~~~~l~~~~--~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~-----------~~ 134 (415)
T 1iir_A 71 D---VRRFTTEAIATQFDEIPAAA--EGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVPS-----------PY 134 (415)
T ss_dssp H---HHHHHHHHHHHHHHHHHHHT--TTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSCC-----------SS
T ss_pred H---HHHHHHHHHHHHHHHHHHHh--cCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCCC-----------cc
Confidence 1 11222222344444443211 6799999998 5668 899999999999998876542100 00
Q ss_pred CCCCCcccccCCcccccCCCccCcccccCcCCCCCChhHHHHHHHHHHHHHhh------------ccccEEEEcCcccCC
Q 012212 161 IDPNGFAILNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAV------------KISNWIINNSVYELD 228 (468)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~l~~~~~~le 228 (468)
.+... .. . ..++ ....+.+.+.+ ........+........+.. ... .+++++++.|+
T Consensus 135 ~p~~~-----~~-~-~~~~--~~~~n~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~ 203 (415)
T 1iir_A 135 YPPPP-----LG-E-PSTQ--DTIDIPAQWER-NNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTD-HPWVAADPVLA 203 (415)
T ss_dssp SCCCC------------------CHHHHHHHH-HHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCS-SCEECSCTTTS
T ss_pred cCCcc-----CC-c-cccc--hHHHHHHHHHH-HHHHHHHHhHHHHHHHHHHcCCCCCCccccccCCC-CEEEeeChhhc
Confidence 00000 00 0 0000 00000000000 00000000000011111111 122 68999999998
Q ss_pred h-hhhccCCCceeeccccCCCCCCCCCCCCCCCCCchhhhhhcccCccEEEEEecccccCCHHHHHHHHHHHHhCCCCEE
Q 012212 229 S-PACDLIPNILPIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALGLESLQKPFL 307 (468)
Q Consensus 229 ~-~~~~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~l 307 (468)
+ +...+ ++++|||+..+.. +..+.++.+|++.. +++|||++||.. ...+.++.+++++++.+.+++
T Consensus 204 ~~~~~~~--~~~~vG~~~~~~~--------~~~~~~~~~~l~~~--~~~v~v~~Gs~~-~~~~~~~~~~~al~~~~~~~v 270 (415)
T 1iir_A 204 PLQPTDL--DAVQTGAWILPDE--------RPLSPELAAFLDAG--PPPVYLGFGSLG-APADAVRVAIDAIRAHGRRVI 270 (415)
T ss_dssp CCCCCSS--CCEECCCCCCCCC--------CCCCHHHHHHHHTS--SCCEEEECC----CCHHHHHHHHHHHHHTTCCEE
T ss_pred CCCcccC--CeEeeCCCccCcc--------cCCCHHHHHHHhhC--CCeEEEeCCCCC-CcHHHHHHHHHHHHHCCCeEE
Confidence 7 52333 8999999886532 23567788999764 368999999986 578888999999999999999
Q ss_pred EEEcCCCCCCcccCCchhHHHHhCCCceEEcccChHHHhcCCCCCceeeccCchhHHHhhhcCCceeccccccchhhhHH
Q 012212 308 WVIRQDFMNGSRAKFPDGFIERVSNRGKIVEWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRN 387 (468)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~~~DQ~~na~ 387 (468)
|+++.. ... . . ..++|+++.+|+||.++| +++++||||||+||+.||+++|||+|++|...||..||+
T Consensus 271 ~~~g~~----~~~-~-~----~~~~~v~~~~~~~~~~~l--~~~d~~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~ 338 (415)
T 1iir_A 271 LSRGWA----DLV-L-P----DDGADCFAIGEVNHQVLF--GRVAAVIHHGGAGTTHVAARAGAPQILLPQMADQPYYAG 338 (415)
T ss_dssp ECTTCT----TCC-C-S----SCGGGEEECSSCCHHHHG--GGSSEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHH
T ss_pred EEeCCC----ccc-c-c----CCCCCEEEeCcCChHHHH--hhCCEEEeCCChhHHHHHHHcCCCEEECCCCCccHHHHH
Confidence 987754 111 1 1 125688999999999999 556669999999999999999999999999999999999
Q ss_pred HHHHHhhceeEeeccCCCccCHHHHHHHHHHHhcChHHHHHHHHHHHHHHH
Q 012212 388 YICEAWKIGLQFFADENGIITRQEIQRKVLTLLKNDDIRSNSLKLKEVARK 438 (468)
Q Consensus 388 rv~~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~~~~r~~a~~l~~~~~~ 438 (468)
++++ +|+|+.++.++ ++.++|.++|+++ +|++||+++++++++++.
T Consensus 339 ~l~~-~g~g~~~~~~~---~~~~~l~~~i~~l-~~~~~~~~~~~~~~~~~~ 384 (415)
T 1iir_A 339 RVAE-LGVGVAHDGPI---PTFDSLSAALATA-LTPETHARATAVAGTIRT 384 (415)
T ss_dssp HHHH-HTSEEECSSSS---CCHHHHHHHHHHH-TSHHHHHHHHHHHHHSCS
T ss_pred HHHH-CCCcccCCcCC---CCHHHHHHHHHHH-cCHHHHHHHHHHHHHHhh
Confidence 9999 59999998776 8999999999999 999999999999998854
|
| >3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-42 Score=335.42 Aligned_cols=378 Identities=17% Similarity=0.208 Sum_probs=269.2
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCCCCCCCc----CCC
Q 012212 3 RQPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDGLELQA----ADR 78 (468)
Q Consensus 3 ~~~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~----~~~ 78 (468)
.|+||+|++.++.||++|++.||++|+++||+|+|++++.+.+.+.. .++.+..++....... ...
T Consensus 3 ~M~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~----------~G~~~~~~~~~~~~~~~~~~~~~ 72 (402)
T 3ia7_A 3 RQRHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKA----------AGAEVVLYKSEFDTFHVPEVVKQ 72 (402)
T ss_dssp CCCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHH----------TTCEEEECCCGGGTSSSSSSSCC
T ss_pred CCCEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHH----------cCCEEEecccccccccccccccc
Confidence 46799999999999999999999999999999999999888888877 5688888875332211 022
Q ss_pred CCHHHHHHH-HHHHhhHHHHHHHHHHhhCCCCCCceEEEec-CCcccHHHHHHHhCCceEEEcccchHHHHHHhhhhhHh
Q 012212 79 EDPLKLGES-VARAMRGCLRDLIEKINQSNDCEPIRCVIAD-VTVGSALEVAESMGIARAAVVPFGPGSLALSLQFPKLL 156 (468)
Q Consensus 79 ~~~~~~~~~-~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D-~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~ 156 (468)
.+....+.. +.......+..+.+.+++ .+||+||+| ....++..+|+.+|||++.+.+.......... .+...
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~~-~~~~~ 147 (402)
T 3ia7_A 73 EDAETQLHLVYVRENVAILRAAEEALGD----NPPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEHYSL-FKELW 147 (402)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHTT----CCCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTTBCH-HHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhc----cCCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCccccc-ccccc
Confidence 334444444 444444555666666654 679999999 77778999999999999998654331100000 00000
Q ss_pred hcCCCCCCCcccccCCcccccCCCccCcccccCcCCCCCChhHHHHHHHHHHHHHh----------hccc-cEEEEcCcc
Q 012212 157 EAGIIDPNGFAILNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQA----------VKIS-NWIINNSVY 225 (468)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~-~~~l~~~~~ 225 (468)
..... ..| .........+.+.... .... +..+....+
T Consensus 148 ~~~~~--------------~~~------------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~ 195 (402)
T 3ia7_A 148 KSNGQ--------------RHP------------------ADVEAVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPK 195 (402)
T ss_dssp HHHTC--------------CCG------------------GGSHHHHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCG
T ss_pred ccccc--------------cCh------------------hhHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCh
Confidence 00000 000 0000011111111111 1122 778888888
Q ss_pred cCChhhhccCCCceeeccccCCCCCCCCCCCCCCCCCchhhhhhcccCccEEEEEecccccCCHHHHHHHHHHHHhCCCC
Q 012212 226 ELDSPACDLIPNILPIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALGLESLQKP 305 (468)
Q Consensus 226 ~le~~~~~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~a~~~~~~~ 305 (468)
+++++...++.++.++||........ .+|....+++++||+++||......+.+..+++++.+.+.+
T Consensus 196 ~~~~~~~~~~~~~~~vGp~~~~~~~~-------------~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~ 262 (402)
T 3ia7_A 196 SFQPFAETFDERFAFVGPTLTGRDGQ-------------PGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWH 262 (402)
T ss_dssp GGSTTGGGCCTTEEECCCCCCC-----------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCE
T ss_pred HhCCccccCCCCeEEeCCCCCCcccC-------------CCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCcE
Confidence 88877555677899999976543211 13443345667999999999766778899999999988888
Q ss_pred EEEEEcCCCCCCcccCCchhHHHHhCCCceEEcccChHHHhcCCCCCceeeccCchhHHHhhhcCCceecccc-ccchhh
Q 012212 306 FLWVIRQDFMNGSRAKFPDGFIERVSNRGKIVEWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPY-FSDQYQ 384 (468)
Q Consensus 306 ~l~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~-~~DQ~~ 384 (468)
+++.++... ..+. .+..++|+++.+|+|+.++|.++++ +|||||+||+.|++++|+|+|++|. ..||..
T Consensus 263 ~~~~~g~~~-------~~~~-~~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~q~~ 332 (402)
T 3ia7_A 263 VVMAIGGFL-------DPAV-LGPLPPNVEAHQWIPFHSVLAHARA--CLTHGTTGAVLEAFAAGVPLVLVPHFATEAAP 332 (402)
T ss_dssp EEEECCTTS-------CGGG-GCSCCTTEEEESCCCHHHHHTTEEE--EEECCCHHHHHHHHHTTCCEEECGGGCGGGHH
T ss_pred EEEEeCCcC-------Chhh-hCCCCCcEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCCcccHHH
Confidence 888777541 1111 1224688999999999999977655 9999999999999999999999999 999999
Q ss_pred hHHHHHHHhhceeEeeccCCCccCHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHH
Q 012212 385 NRNYICEAWKIGLQFFADENGIITRQEIQRKVLTLLKNDDIRSNSLKLKEVARKSLLGGGSSFRNFESFISDIK 458 (468)
Q Consensus 385 na~rv~~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 458 (468)
||.++++. |+|+.++.++ ++++.|.++|+++|+|++++++++++++++.+ .+++.+.++.+.+.+.
T Consensus 333 ~a~~~~~~-g~g~~~~~~~---~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~~~ 398 (402)
T 3ia7_A 333 SAERVIEL-GLGSVLRPDQ---LEPASIREAVERLAADSAVRERVRRMQRDILS----SGGPARAADEVEAYLG 398 (402)
T ss_dssp HHHHHHHT-TSEEECCGGG---CSHHHHHHHHHHHHHCHHHHHHHHHHHHHHHT----SCHHHHHHHHHHHHHH
T ss_pred HHHHHHHc-CCEEEccCCC---CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHhh----CChHHHHHHHHHHHHh
Confidence 99999995 9999998877 89999999999999999999999999999877 5555555555555443
|
| >1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-43 Score=346.34 Aligned_cols=374 Identities=13% Similarity=0.084 Sum_probs=258.2
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCCCCCCCcCC--CCCHH
Q 012212 5 PHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDGLELQAAD--REDPL 82 (468)
Q Consensus 5 ~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~--~~~~~ 82 (468)
|||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+.+. +++|+.++......... .....
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~----------g~~~~~~~~~~~~~~~~~~~~~~~ 70 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAEV----------GVPHVPVGLPQHMMLQEGMPPPPP 70 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH----------TCCEEECSCCGGGCCCTTSCCCCH
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHc----------CCeeeecCCCHHHHHhhccccchh
Confidence 6999999999999999999999999999999999999888877774 47788877543211100 11111
Q ss_pred HHHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecC-Cccc--HHHHHHHhCCceEEEcccchHHHHHHhhhhhHhhcC
Q 012212 83 KLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADV-TVGS--ALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAG 159 (468)
Q Consensus 83 ~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~-~~~~--~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~ 159 (468)
..+ ...+......+++.+.... .+||+||+|. +..+ +..+|+.+|||++.+.+.+..... .++|
T Consensus 71 ~~~---~~~~~~~~~~~~~~l~~~~--~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~~--~~~p------ 137 (416)
T 1rrv_A 71 EEE---QRLAAMTVEMQFDAVPGAA--EGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLAS--PHLP------ 137 (416)
T ss_dssp HHH---HHHHHHHHHHHHHHHHHHT--TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSCC--SSSC------
T ss_pred HHH---HHHHHHHHHHHHHHHHHHh--cCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCCC--cccC------
Confidence 111 1122222344444444222 5799999997 4556 888999999999988766532100 0000
Q ss_pred CCCCCCcccccCCcccccCCCccCcccccCcCCCCCChh--------HHHHHHHHHHHHHh------------hccccEE
Q 012212 160 IIDPNGFAILNDGLISLSDEIPAWKRNEYTWSFPDEPSE--------QKILLGIICAVIQA------------VKISNWI 219 (468)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~------------~~~~~~~ 219 (468)
+ ..+ ++ ..+....+... ...+........+. .... .+
T Consensus 138 -------~--------~~~-~~------~~~~r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~ 194 (416)
T 1rrv_A 138 -------P--------AYD-EP------TTPGVTDIRVLWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGE-RP 194 (416)
T ss_dssp -------C--------CBC-SC------CCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCS-SC
T ss_pred -------C--------CCC-CC------CCchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCchhhhccCC-Ce
Confidence 0 000 00 00000000000 00000011111111 1123 68
Q ss_pred EEcCcccCChhhhccCCCceeeccccCCCCCCCCCCCCCCCCCchhhhhhcccCccEEEEEeccccc-CCHHHHHHHHHH
Q 012212 220 INNSVYELDSPACDLIPNILPIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAV-LSQQQFAELALG 298 (468)
Q Consensus 220 l~~~~~~le~~~~~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~-~~~~~~~~~~~a 298 (468)
+++++++|+++...+ +++++||+..+.. +..+.++.+|++.. +++|||++||... ...+.+..++++
T Consensus 195 l~~~~~~l~~~~~~~--~~~~vG~~~~~~~--------~~~~~~~~~~l~~~--~~~v~v~~Gs~~~~~~~~~~~~~~~a 262 (416)
T 1rrv_A 195 LLAADPVLAPLQPDV--DAVQTGAWLLSDE--------RPLPPELEAFLAAG--SPPVHIGFGSSSGRGIADAAKVAVEA 262 (416)
T ss_dssp EECSCTTTSCCCSSC--CCEECCCCCCCCC--------CCCCHHHHHHHHSS--SCCEEECCTTCCSHHHHHHHHHHHHH
T ss_pred EEccCccccCCCCCC--CeeeECCCccCcc--------CCCCHHHHHHHhcC--CCeEEEecCCCCccChHHHHHHHHHH
Confidence 999999998763333 8999999887532 23567788999764 3689999999843 456778899999
Q ss_pred HHhCCCCEEEEEcCCCCCCcccCCchhHHHHhCCCceEEcccChHHHhcCCCCCceeeccCchhHHHhhhcCCceecccc
Q 012212 299 LESLQKPFLWVIRQDFMNGSRAKFPDGFIERVSNRGKIVEWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPY 378 (468)
Q Consensus 299 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~ 378 (468)
+.+.+.+++|+++.. ... . +..++|+++.+|+||.++| +++++||||||+||++||+++|||+|++|+
T Consensus 263 l~~~~~~~v~~~g~~----~~~-~-----~~~~~~v~~~~~~~~~~ll--~~~d~~v~~~G~~t~~Ea~~~G~P~i~~p~ 330 (416)
T 1rrv_A 263 IRAQGRRVILSRGWT----ELV-L-----PDDRDDCFAIDEVNFQALF--RRVAAVIHHGSAGTEHVATRAGVPQLVIPR 330 (416)
T ss_dssp HHHTTCCEEEECTTT----TCC-C-----SCCCTTEEEESSCCHHHHG--GGSSEEEECCCHHHHHHHHHHTCCEEECCC
T ss_pred HHHCCCeEEEEeCCc----ccc-c-----cCCCCCEEEeccCChHHHh--ccCCEEEecCChhHHHHHHHcCCCEEEccC
Confidence 999999999988765 111 1 1236788999999999999 555669999999999999999999999999
Q ss_pred ccchhhhHHHHHHHhhceeEeeccCCCccCHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHH
Q 012212 379 FSDQYQNRNYICEAWKIGLQFFADENGIITRQEIQRKVLTLLKNDDIRSNSLKLKEVARKSLLGGGSSFRNFESFISDIK 458 (468)
Q Consensus 379 ~~DQ~~na~rv~~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 458 (468)
..||..||+++++ +|+|+.++.++ .+.++|.++|+++ +|++||++++++++++++ .++. +.++.+++.+.
T Consensus 331 ~~dQ~~na~~l~~-~g~g~~~~~~~---~~~~~l~~~i~~l-~~~~~~~~~~~~~~~~~~----~~~~-~~~~~i~e~~~ 400 (416)
T 1rrv_A 331 NTDQPYFAGRVAA-LGIGVAHDGPT---PTFESLSAALTTV-LAPETRARAEAVAGMVLT----DGAA-AAADLVLAAVG 400 (416)
T ss_dssp SBTHHHHHHHHHH-HTSEEECSSSC---CCHHHHHHHHHHH-TSHHHHHHHHHHTTTCCC----CHHH-HHHHHHHHHHH
T ss_pred CCCcHHHHHHHHH-CCCccCCCCCC---CCHHHHHHHHHHh-hCHHHHHHHHHHHHHHhh----cCcH-HHHHHHHHHHh
Confidence 9999999999999 49999998766 8999999999999 999999999999988865 3444 44444425443
|
| >3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-41 Score=332.47 Aligned_cols=352 Identities=15% Similarity=0.135 Sum_probs=249.8
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCCCCCCCcC-CCCCHHH
Q 012212 5 PHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDGLELQAA-DREDPLK 83 (468)
Q Consensus 5 ~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~ 83 (468)
|||+|++.++.||++|+++||++|.++||+|+|++++.+.+.+.+ .++.|..++........ .......
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~~----------~g~~~~~l~~~~~~~~~~~~~~~~~ 70 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAE----------VGVPMVPVGRAVRAGAREPGELPPG 70 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHHH----------TTCCEEECSSCSSGGGSCTTCCCTT
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHH----------cCCceeecCCCHHHHhccccCCHHH
Confidence 689999999999999999999999999999999999999988888 55788888754332110 0111111
Q ss_pred HHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCcccH---HHHHHHhCCceEEEcccchHHHHHHhhhhhHhhcCC
Q 012212 84 LGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVGSA---LEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGI 160 (468)
Q Consensus 84 ~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~~~---~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~ 160 (468)
+...+.......++++.+.+ .+||+||+|.....+ ..+|+.+|||++.+...+......... ....
T Consensus 71 ~~~~~~~~~~~~~~~l~~~~------~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~~~~--~~~~--- 139 (404)
T 3h4t_A 71 AAEVVTEVVAEWFDKVPAAI------EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSEQSQ--AERD--- 139 (404)
T ss_dssp CGGGHHHHHHHHHHHHHHHH------TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGGSCH--HHHH---
T ss_pred HHHHHHHHHHHHHHHHHHHh------cCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCChhHH--HHHH---
Confidence 12222333333344443333 349999999765534 789999999999888766421000000 0000
Q ss_pred CCCCCcccccCCcccccCCCccCcccccCcCCCCCChhHHHHHHHHHHHHHhh-----------ccccEEEEcCcccCCh
Q 012212 161 IDPNGFAILNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAV-----------KISNWIINNSVYELDS 229 (468)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~~~~~le~ 229 (468)
. .+...+..+.....+....+ ...+..+.+.++.+.+
T Consensus 140 ------------------------~--------~~~~~~~~~~~~~~~~~~~lgl~~~~~~~~~~~~~~~l~~~~~~l~p 187 (404)
T 3h4t_A 140 ------------------------M--------YNQGADRLFGDAVNSHRASIGLPPVEHLYDYGYTDQPWLAADPVLSP 187 (404)
T ss_dssp ------------------------H--------HHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTTTSC
T ss_pred ------------------------H--------HHHHHHHHhHHHHHHHHHHcCCCCCcchhhccccCCeEEeeCcceeC
Confidence 0 00000000000000000000 0123456678888865
Q ss_pred hhhccCCCceeeccccCCCCCCCCCCCCCCCCCchhhhhhcccCccEEEEEecccccCCHHHHHHHHHHHHhCCCCEEEE
Q 012212 230 PACDLIPNILPIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALGLESLQKPFLWV 309 (468)
Q Consensus 230 ~~~~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~l~~ 309 (468)
. .++.+++.++|++..+... ..++++.+|++. ++++|||++||... ..+.+..+++++.+.+.+++|+
T Consensus 188 ~-~~~~~~~~~~G~~~~~~~~--------~~~~~l~~~l~~--~~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~~~vv~~ 255 (404)
T 3h4t_A 188 L-RPTDLGTVQTGAWILPDQR--------PLSAELEGFLRA--GSPPVYVGFGSGPA-PAEAARVAIEAVRAQGRRVVLS 255 (404)
T ss_dssp C-CTTCCSCCBCCCCCCCCCC--------CCCHHHHHHHHT--SSCCEEECCTTSCC-CTTHHHHHHHHHHHTTCCEEEE
T ss_pred C-CCCCCCeEEeCccccCCCC--------CCCHHHHHHHhc--CCCeEEEECCCCCC-cHHHHHHHHHHHHhCCCEEEEE
Confidence 5 5677899999987665322 367778889874 34689999999866 7788999999999999999998
Q ss_pred EcCCCCCCcccCCchhHHHHhCCCceEEcccChHHHhcCCCCCceeeccCchhHHHhhhcCCceeccccccchhhhHHHH
Q 012212 310 IRQDFMNGSRAKFPDGFIERVSNRGKIVEWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYI 389 (468)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv 389 (468)
++.. ..... ..++|+++.+|+||.++|.+ +++||||||+||+.|++++|||+|++|+..||+.||.++
T Consensus 256 ~g~~----~~~~~------~~~~~v~~~~~~~~~~ll~~--~d~~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~ 323 (404)
T 3h4t_A 256 SGWA----GLGRI------DEGDDCLVVGEVNHQVLFGR--VAAVVHHGGAGTTTAVTRAGAPQVVVPQKADQPYYAGRV 323 (404)
T ss_dssp CTTT----TCCCS------SCCTTEEEESSCCHHHHGGG--SSEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHH
T ss_pred eCCc----ccccc------cCCCCEEEecCCCHHHHHhh--CcEEEECCcHHHHHHHHHcCCCEEEcCCcccHHHHHHHH
Confidence 8754 11111 12688999999999999965 455999999999999999999999999999999999999
Q ss_pred HHHhhceeEeeccCCCccCHHHHHHHHHHHhcChHHHHHHHHHHHHHHH
Q 012212 390 CEAWKIGLQFFADENGIITRQEIQRKVLTLLKNDDIRSNSLKLKEVARK 438 (468)
Q Consensus 390 ~~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~~~~r~~a~~l~~~~~~ 438 (468)
++. |+|+.++..+ ++.++|.++|+++|+ ++|+++++++++.+.+
T Consensus 324 ~~~-G~g~~l~~~~---~~~~~l~~ai~~ll~-~~~~~~~~~~~~~~~~ 367 (404)
T 3h4t_A 324 ADL-GVGVAHDGPT---PTVESLSAALATALT-PGIRARAAAVAGTIRT 367 (404)
T ss_dssp HHH-TSEEECSSSS---CCHHHHHHHHHHHTS-HHHHHHHHHHHTTCCC
T ss_pred HHC-CCEeccCcCC---CCHHHHHHHHHHHhC-HHHHHHHHHHHHHHhh
Confidence 995 9999998777 899999999999999 9999999999987743
|
| >2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-40 Score=326.07 Aligned_cols=376 Identities=16% Similarity=0.221 Sum_probs=257.3
Q ss_pred CCCCEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCCCCCCCcCC----
Q 012212 2 SRQPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDGLELQAAD---- 77 (468)
Q Consensus 2 ~~~~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~---- 77 (468)
++||||+|++.++.||++|++.||++|+++||+|++++++...+.+.+ .+++++.++...+.....
T Consensus 5 m~m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~~----------~g~~~~~~~~~~~~~~~~~~~~ 74 (430)
T 2iyf_A 5 TTPAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAA----------TGPRPVLYHSTLPGPDADPEAW 74 (430)
T ss_dssp ---CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHT----------TSCEEEECCCCSCCTTSCGGGG
T ss_pred cccceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHHh----------CCCEEEEcCCcCcccccccccc
Confidence 346899999999999999999999999999999999999987766655 568888888653322100
Q ss_pred CCCHHHHHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCcccHHHHHHHhCCceEEEcccchHHHHHHhhhhhHhh
Q 012212 78 REDPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVGSALEVAESMGIARAAVVPFGPGSLALSLQFPKLLE 157 (468)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~ 157 (468)
..+....+..+.......+..+.+.+++ .+||+||+|....++..+|+.+|||++.+.+.+.........+.....
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~ 150 (430)
T 2iyf_A 75 GSTLLDNVEPFLNDAIQALPQLADAYAD----DIPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGYEEEVAEPMW 150 (430)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHHHHHTT----SCCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTHHHHTHHHHH
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHhhc----cCCCEEEECCccHHHHHHHHHcCCCEEEEecccccccccccccccchh
Confidence 1233333333333334445555555554 579999999877788999999999999988654310000000000000
Q ss_pred cCCCCCCCcccccCCcccccCCCccCcccccCcCCCCCChhHHHHHHHHHHHHH----------hhccccEEEEcCcccC
Q 012212 158 AGIIDPNGFAILNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQ----------AVKISNWIINNSVYEL 227 (468)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~~~~~l 227 (468)
+ . ....+ ....+.....+... ....++.+++++.+.+
T Consensus 151 ----~------~----~~~~~-------------------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~ 197 (430)
T 2iyf_A 151 ----R------E----PRQTE-------------------RGRAYYARFEAWLKENGITEHPDTFASHPPRSLVLIPKAL 197 (430)
T ss_dssp ----H------H----HHHSH-------------------HHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGG
T ss_pred ----h------h----hccch-------------------HHHHHHHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHh
Confidence 0 0 00000 00000011111111 1125688999999999
Q ss_pred ChhhhccCCC-ceeeccccCCCCCCCCCCCCCCCCCchhhhhhcccCccEEEEEecccccCCHHHHHHHHHHHHhC-CCC
Q 012212 228 DSPACDLIPN-ILPIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALGLESL-QKP 305 (468)
Q Consensus 228 e~~~~~~~p~-v~~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~a~~~~-~~~ 305 (468)
+++..++.++ ++++||....... ..+|....+++++||+++||......+.+..+++++.+. +.+
T Consensus 198 ~~~~~~~~~~~v~~vG~~~~~~~~-------------~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~~ 264 (430)
T 2iyf_A 198 QPHADRVDEDVYTFVGACQGDRAE-------------EGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGWH 264 (430)
T ss_dssp STTGGGSCTTTEEECCCCC------------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTTEE
T ss_pred CCCcccCCCccEEEeCCcCCCCCC-------------CCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCCeE
Confidence 8764556678 9999986543210 012333334567999999998755678888999999886 777
Q ss_pred EEEEEcCCCCCCcccCCchhHHHHhCCCceEEcccChHHHhcCCCCCceeeccCchhHHHhhhcCCceeccccccchhhh
Q 012212 306 FLWVIRQDFMNGSRAKFPDGFIERVSNRGKIVEWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQN 385 (468)
Q Consensus 306 ~l~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~~~DQ~~n 385 (468)
++|.++.+. ..+.+ +..++|+++.+|+||.++|.++++ ||||||+||+.||+++|+|+|++|...||..|
T Consensus 265 ~~~~~G~~~-------~~~~l-~~~~~~v~~~~~~~~~~~l~~ad~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~~q~~~ 334 (430)
T 2iyf_A 265 LVLQIGRKV-------TPAEL-GELPDNVEVHDWVPQLAILRQADL--FVTHAGAGGSQEGLATATPMIAVPQAVDQFGN 334 (430)
T ss_dssp EEEECC----------CGGGG-CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHH
T ss_pred EEEEeCCCC-------ChHHh-ccCCCCeEEEecCCHHHHhhccCE--EEECCCccHHHHHHHhCCCEEECCCccchHHH
Confidence 878776541 11111 123678999999999999977765 99999999999999999999999999999999
Q ss_pred HHHHHHHhhceeEeeccCCCccCHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHH
Q 012212 386 RNYICEAWKIGLQFFADENGIITRQEIQRKVLTLLKNDDIRSNSLKLKEVARKSLLGGGSSFRNFESFIS 455 (468)
Q Consensus 386 a~rv~~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 455 (468)
|.++++. |+|+.++..+ ++.++|.++|.++|+|+++++++.++++++.+. ++..+.++.+.+
T Consensus 335 a~~~~~~-g~g~~~~~~~---~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~----~~~~~~~~~i~~ 396 (430)
T 2iyf_A 335 ADMLQGL-GVARKLATEE---ATADLLRETALALVDDPEVARRLRRIQAEMAQE----GGTRRAADLIEA 396 (430)
T ss_dssp HHHHHHT-TSEEECCCC----CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH----CHHHHHHHHHHT
T ss_pred HHHHHHc-CCEEEcCCCC---CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhc----CcHHHHHHHHHH
Confidence 9999995 9999998766 899999999999999999999999999998873 344444444443
|
| >2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-41 Score=331.63 Aligned_cols=373 Identities=15% Similarity=0.135 Sum_probs=247.3
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCCCCCCCc-------
Q 012212 3 RQPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDGLELQA------- 75 (468)
Q Consensus 3 ~~~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~------- 75 (468)
.||||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+.. .++.|+.++...+...
T Consensus 19 ~~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~~----------~G~~~~~i~~~~~~~~~~~~~~~ 88 (441)
T 2yjn_A 19 SHMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITA----------AGLTAVPVGTDVDLVDFMTHAGH 88 (441)
T ss_dssp CCCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHHT----------TTCCEEECSCCCCHHHHHHHTTH
T ss_pred CccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHHHh----------CCCceeecCCccchHHHhhhhhc
Confidence 46899999999999999999999999999999999999988777776 5688888876531000
Q ss_pred --------CC-----CC--CHHHH---HHHHHHHhh-----H-HHHHHHHHHhhCCCCCCceEEEecCCcccHHHHHHHh
Q 012212 76 --------AD-----RE--DPLKL---GESVARAMR-----G-CLRDLIEKINQSNDCEPIRCVIADVTVGSALEVAESM 131 (468)
Q Consensus 76 --------~~-----~~--~~~~~---~~~~~~~~~-----~-~~~~ll~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~l 131 (468)
.. .. ....+ ...+...+. . .++++++.+++ .+||+||+|....++..+|+.+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~pDlVv~d~~~~~~~~aA~~l 164 (441)
T 2yjn_A 89 DIIDYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRK----WRPDLVIWEPLTFAAPIAAAVT 164 (441)
T ss_dssp HHHHHHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHH----HCCSEEEECTTCTHHHHHHHHH
T ss_pred ccccccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHh----cCCCEEEecCcchhHHHHHHHc
Confidence 00 10 11111 111211111 2 45666665554 5699999999878899999999
Q ss_pred CCceEEEcccchHHHHHHhhhhhHhhcCCCCCCCcccccCCcccccCCCccCcccccCcCCCCCChhHHHHHHHHHHHHH
Q 012212 132 GIARAAVVPFGPGSLALSLQFPKLLEAGIIDPNGFAILNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQ 211 (468)
Q Consensus 132 giP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (468)
|||++.+...+.........++.... .. +.. ... . .....+....+
T Consensus 165 giP~v~~~~~~~~~~~~~~~~~~~~~--~~----------------~~~-----------~~~-~----~~~~~l~~~~~ 210 (441)
T 2yjn_A 165 GTPHARLLWGPDITTRARQNFLGLLP--DQ----------------PEE-----------HRE-D----PLAEWLTWTLE 210 (441)
T ss_dssp TCCEEEECSSCCHHHHHHHHHHHHGG--GS----------------CTT-----------TCC-C----HHHHHHHHHHH
T ss_pred CCCEEEEecCCCcchhhhhhhhhhcc--cc----------------ccc-----------ccc-c----hHHHHHHHHHH
Confidence 99999986544322111100000000 00 000 000 0 01111111122
Q ss_pred hhc---------cccEEEEcCcccCChhhhccCCCceeeccccCCCCCCCCCCCCCCCCCchhhhhhcccCccEEEEEec
Q 012212 212 AVK---------ISNWIINNSVYELDSPACDLIPNILPIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFG 282 (468)
Q Consensus 212 ~~~---------~~~~~l~~~~~~le~~~~~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~G 282 (468)
.+. .++..+..+.+.++++ .+++. ..+++.... .+.++.+|++..+++++|||++|
T Consensus 211 ~~g~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~--~~~~~~~~~------------~~~~~~~~l~~~~~~~~v~v~~G 275 (441)
T 2yjn_A 211 KYGGPAFDEEVVVGQWTIDPAPAAIRLD-TGLKT--VGMRYVDYN------------GPSVVPEWLHDEPERRRVCLTLG 275 (441)
T ss_dssp HTTCCCCCGGGTSCSSEEECSCGGGSCC-CCCCE--EECCCCCCC------------SSCCCCGGGSSCCSSCEEEEEC-
T ss_pred HcCCCCCCccccCCCeEEEecCccccCC-CCCCC--CceeeeCCC------------CCcccchHhhcCCCCCEEEEECC
Confidence 111 2455666666666643 22221 112221111 12335578876666789999999
Q ss_pred ccccC---CHHHHHHHHHHHHhCCCCEEEEEcCCCCCCcccCCchhHHHHhCCCceEEcccChHHHhcCCCCCceeeccC
Q 012212 283 SVAVL---SQQQFAELALGLESLQKPFLWVIRQDFMNGSRAKFPDGFIERVSNRGKIVEWAPQEKVLGHSSVACFISHCG 359 (468)
Q Consensus 283 s~~~~---~~~~~~~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~I~hGG 359 (468)
|.... ..+.+..+++++.+.+.+++|++++. ....+. ..++|+++.+|+||.++|. .+++||||||
T Consensus 276 s~~~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~----~~~~l~-----~~~~~v~~~~~~~~~~ll~--~ad~~V~~~G 344 (441)
T 2yjn_A 276 ISSRENSIGQVSIEELLGAVGDVDAEIIATFDAQ----QLEGVA-----NIPDNVRTVGFVPMHALLP--TCAATVHHGG 344 (441)
T ss_dssp ---------CCSTTTTHHHHHTSSSEEEECCCTT----TTSSCS-----SCCSSEEECCSCCHHHHGG--GCSEEEECCC
T ss_pred CCcccccChHHHHHHHHHHHHcCCCEEEEEECCc----chhhhc-----cCCCCEEEecCCCHHHHHh--hCCEEEECCC
Confidence 98543 34567788899988888998887754 112221 1367899999999999994 5566999999
Q ss_pred chhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeeccCCCccCHHHHHHHHHHHhcChHHHHHHHHHHHHHHHH
Q 012212 360 WNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGIITRQEIQRKVLTLLKNDDIRSNSLKLKEVARKS 439 (468)
Q Consensus 360 ~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~~~~r~~a~~l~~~~~~~ 439 (468)
+||+.||+++|||+|++|+..||..||.++++. |+|+.++.++ ++.++|.++|+++|+|++|+++++++++++.+
T Consensus 345 ~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~-g~g~~~~~~~---~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~- 419 (441)
T 2yjn_A 345 PGSWHTAAIHGVPQVILPDGWDTGVRAQRTQEF-GAGIALPVPE---LTPDQLRESVKRVLDDPAHRAGAARMRDDMLA- 419 (441)
T ss_dssp HHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHH-TSEEECCTTT---CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHT-
T ss_pred HHHHHHHHHhCCCEEEeCCcccHHHHHHHHHHc-CCEEEccccc---CCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHc-
Confidence 999999999999999999999999999999995 9999998877 89999999999999999999999999999987
Q ss_pred hcCCCchHHHHHHHHHHH
Q 012212 440 LLGGGSSFRNFESFISDI 457 (468)
Q Consensus 440 ~~~~g~~~~~~~~~~~~~ 457 (468)
.++..+.++.+.+.+
T Consensus 420 ---~~~~~~~~~~i~~~~ 434 (441)
T 2yjn_A 420 ---EPSPAEVVGICEELA 434 (441)
T ss_dssp ---SCCHHHHHHHHHHHH
T ss_pred ---CCCHHHHHHHHHHHH
Confidence 455544444444433
|
| >2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-39 Score=314.67 Aligned_cols=352 Identities=15% Similarity=0.111 Sum_probs=250.1
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCCCCC-CC-------c-
Q 012212 5 PHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDGLE-LQ-------A- 75 (468)
Q Consensus 5 ~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~-~~-------~- 75 (468)
|||++++.++.||++|+++||++|+++||+|+|++++...+.+.. .++.+..++.... .. .
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~----------~g~~~~~~~~~~~~~~~~~~~~~~~ 70 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVTG----------VGLPAVATTDLPIRHFITTDREGRP 70 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH----------TTCCEEESCSSCHHHHHHBCTTSCB
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHHh----------CCCEEEEeCCcchHHHHhhhcccCc
Confidence 689999999999999999999999999999999999887776666 4577887775430 00 0
Q ss_pred CCC-CC--HHHHH-HH-HHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCcccHHHHHHHhCCceEEEcccchHHHHHHh
Q 012212 76 ADR-ED--PLKLG-ES-VARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVGSALEVAESMGIARAAVVPFGPGSLALSL 150 (468)
Q Consensus 76 ~~~-~~--~~~~~-~~-~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~ 150 (468)
... .. ....+ .. +.......+.++.+.+++ .+||+||+|.+..++..+|+.+|||++.+...+...
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~~----- 141 (384)
T 2p6p_A 71 EAIPSDPVAQARFTGRWFARMAASSLPRMLDFSRA----WRPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVDA----- 141 (384)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCC-----
T ss_pred cccCcchHHHHHHHHHHHHhhHHHHHHHHHHHHhc----cCCcEEEECcchhhHHHHHHhcCCCEEEeccCCccc-----
Confidence 000 11 11111 21 222233345555555554 469999999887788899999999999876322100
Q ss_pred hhhhHhhcCCCCCCCcccccCCcccccCCCccCcccccCcCCCCCChhHHHHHHHHHHHHHhhc-----cccEEEEcCcc
Q 012212 151 QFPKLLEAGIIDPNGFAILNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVK-----ISNWIINNSVY 225 (468)
Q Consensus 151 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~~ 225 (468)
.++ .........+...... .++.++.++.+
T Consensus 142 ---------------------------~~~------------------~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 176 (384)
T 2p6p_A 142 ---------------------------DGI------------------HPGADAELRPELSELGLERLPAPDLFIDICPP 176 (384)
T ss_dssp ---------------------------TTT------------------HHHHHHHTHHHHHHTTCSSCCCCSEEEECSCG
T ss_pred ---------------------------chh------------------hHHHHHHHHHHHHHcCCCCCCCCCeEEEECCH
Confidence 000 0001111111111111 16789999999
Q ss_pred cCChhhhccC-CCceeeccccCCCCCCCCCCCCCCCCCchhhhhhcccCccEEEEEecccccC-----CHHHHHHHHHHH
Q 012212 226 ELDSPACDLI-PNILPIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVL-----SQQQFAELALGL 299 (468)
Q Consensus 226 ~le~~~~~~~-p~v~~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~-----~~~~~~~~~~a~ 299 (468)
.++.+ .+++ +++.+++. . .+.++.+|++..+++++||+++||.... +.+.+..+++++
T Consensus 177 ~~~~~-~~~~~~~~~~~~~---~------------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al 240 (384)
T 2p6p_A 177 SLRPA-NAAPARMMRHVAT---S------------RQCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDL 240 (384)
T ss_dssp GGSCT-TSCCCEECCCCCC---C------------CCCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHH
T ss_pred HHCCC-CCCCCCceEecCC---C------------CCCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHH
Confidence 88865 3333 23444421 1 1223557887655667999999998653 457788999999
Q ss_pred HhCCCCEEEEEcCCCCCCcccCCchhHHHHhCCCceEEcccChHHHhcCCCCCceeeccCchhHHHhhhcCCceeccccc
Q 012212 300 ESLQKPFLWVIRQDFMNGSRAKFPDGFIERVSNRGKIVEWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYF 379 (468)
Q Consensus 300 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~~ 379 (468)
.+.+.+++|++++. . .+.+ +..++|+++ +|+||.++|+++ ++||||||+||+.||+++|+|+|++|..
T Consensus 241 ~~~~~~~~~~~g~~----~----~~~l-~~~~~~v~~-~~~~~~~~l~~~--d~~v~~~G~~t~~Ea~~~G~P~v~~p~~ 308 (384)
T 2p6p_A 241 VRWDVELIVAAPDT----V----AEAL-RAEVPQARV-GWTPLDVVAPTC--DLLVHHAGGVSTLTGLSAGVPQLLIPKG 308 (384)
T ss_dssp HTTTCEEEEECCHH----H----HHHH-HHHCTTSEE-ECCCHHHHGGGC--SEEEECSCTTHHHHHHHTTCCEEECCCS
T ss_pred hcCCcEEEEEeCCC----C----HHhh-CCCCCceEE-cCCCHHHHHhhC--CEEEeCCcHHHHHHHHHhCCCEEEccCc
Confidence 98888998887632 1 1111 235789999 999999999554 5599999999999999999999999999
Q ss_pred cchhhhHHHHHHHhhceeEeeccCCCccCHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHH
Q 012212 380 SDQYQNRNYICEAWKIGLQFFADENGIITRQEIQRKVLTLLKNDDIRSNSLKLKEVARKSLLGGGSSFRNFESFISD 456 (468)
Q Consensus 380 ~DQ~~na~rv~~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~ 456 (468)
.||..||.++++. |+|+.++..+ .+.++|.++|+++|+|++||++++++++++++ .++..+.++.+.+.
T Consensus 309 ~dq~~~a~~~~~~-g~g~~~~~~~---~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~ 377 (384)
T 2p6p_A 309 SVLEAPARRVADY-GAAIALLPGE---DSTEAIADSCQELQAKDTYARRAQDLSREISG----MPLPATVVTALEQL 377 (384)
T ss_dssp HHHHHHHHHHHHH-TSEEECCTTC---CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHT----SCCHHHHHHHHHHH
T ss_pred ccchHHHHHHHHC-CCeEecCcCC---CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHh----CCCHHHHHHHHHHH
Confidence 9999999999994 9999998766 89999999999999999999999999999988 45555555444433
|
| >4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-38 Score=307.66 Aligned_cols=343 Identities=13% Similarity=0.149 Sum_probs=225.5
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCCCCCC---------
Q 012212 3 RQPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDGLEL--------- 73 (468)
Q Consensus 3 ~~~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~--------- 73 (468)
.+|||+|++.++.||++|++.||++|.++||+|++++++.+.+.+.. .++.+..++.....
T Consensus 14 ~~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~----------~G~~~~~~~~~~~~~~~~~~~~~ 83 (398)
T 4fzr_A 14 SHMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTG----------AGLPFAPTCPSLDMPEVLSWDRE 83 (398)
T ss_dssp -CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHH----------TTCCEEEEESSCCHHHHHSBCTT
T ss_pred CceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHh----------CCCeeEecCCccchHhhhhhhcc
Confidence 36899999999999999999999999999999999999888888887 44666666531110
Q ss_pred Cc--CCCCCHH----HHHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCcccHHHHHHHhCCceEEEcccchHHHH
Q 012212 74 QA--ADREDPL----KLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVGSALEVAESMGIARAAVVPFGPGSLA 147 (468)
Q Consensus 74 ~~--~~~~~~~----~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~ 147 (468)
.. ....+.. .....+.......++++.+.+++ .+||+|++|...+++..+|+.+|||++.+.........
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~~~~ 159 (398)
T 4fzr_A 84 GNRTTMPREEKPLLEHIGRGYGRLVLRMRDEALALAER----WKPDLVLTETYSLTGPLVAATLGIPWIEQSIRLASPEL 159 (398)
T ss_dssp SCBCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCHH
T ss_pred CcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh----CCCCEEEECccccHHHHHHHhhCCCEEEeccCCCCchh
Confidence 00 0011111 12222233333444455555554 56999999988888999999999999987654321110
Q ss_pred HHhhhhhHhhcCCCCCCCcccccCCcccccCCCccCcccccCcCCCCCChhHHHHHHHHHHHHHh-----hccccEEEEc
Q 012212 148 LSLQFPKLLEAGIIDPNGFAILNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQA-----VKISNWIINN 222 (468)
Q Consensus 148 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~ 222 (468)
.... ....+.+.... ....+..+..
T Consensus 160 ~~~~--------------------------------------------------~~~~l~~~~~~~~~~~~~~~~~~~~~ 189 (398)
T 4fzr_A 160 IKSA--------------------------------------------------GVGELAPELAELGLTDFPDPLLSIDV 189 (398)
T ss_dssp HHHH--------------------------------------------------HHHHTHHHHHTTTCSSCCCCSEEEEC
T ss_pred hhHH--------------------------------------------------HHHHHHHHHHHcCCCCCCCCCeEEEe
Confidence 0000 00000011111 1123556666
Q ss_pred CcccCChhhhccCCCceeeccccCCCCCCCCCCCCCCCCCchhhhhhcccCccEEEEEecccccC--------CHHHHHH
Q 012212 223 SVYELDSPACDLIPNILPIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVL--------SQQQFAE 294 (468)
Q Consensus 223 ~~~~le~~~~~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~--------~~~~~~~ 294 (468)
..+.+..+.......+.++++.. ...++.+|+...+++++||+++||.... ..+.+..
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~ 255 (398)
T 4fzr_A 190 CPPSMEAQPKPGTTKMRYVPYNG--------------RNDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQA 255 (398)
T ss_dssp SCGGGC----CCCEECCCCCCCC--------------SSCCCCHHHHSCCSSCEEECC----------------CCSHHH
T ss_pred CChhhCCCCCCCCCCeeeeCCCC--------------CCCCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHH
Confidence 66666544111111122222110 1223446777656678999999998432 3456888
Q ss_pred HHHHHHhCCCCEEEEEcCCCCCCcccCCchhHHHHhCCCceEEcccChHHHhcCCCCCceeeccCchhHHHhhhcCCcee
Q 012212 295 LALGLESLQKPFLWVIRQDFMNGSRAKFPDGFIERVSNRGKIVEWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFL 374 (468)
Q Consensus 295 ~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v 374 (468)
+++++.+.+.+++|+.++. .. +.+ +..++|+++.+|+|+.++|.++++ ||||||.||+.||+++|+|+|
T Consensus 256 ~~~al~~~~~~~v~~~~~~----~~----~~l-~~~~~~v~~~~~~~~~~ll~~ad~--~v~~gG~~t~~Ea~~~G~P~v 324 (398)
T 4fzr_A 256 LSQELPKLGFEVVVAVSDK----LA----QTL-QPLPEGVLAAGQFPLSAIMPACDV--VVHHGGHGTTLTCLSEGVPQV 324 (398)
T ss_dssp HHHHGGGGTCEEEECCCC-----------------CCTTEEEESCCCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCEE
T ss_pred HHHHHHhCCCEEEEEeCCc----ch----hhh-ccCCCcEEEeCcCCHHHHHhhCCE--EEecCCHHHHHHHHHhCCCEE
Confidence 9999998888888877654 11 111 234789999999999999977655 999999999999999999999
Q ss_pred ccccccchhhhHHHHHHHhhceeEeeccCCCccCHHHHHHHHHHHhcChHHHHHHHHHHHHHHH
Q 012212 375 CWPYFSDQYQNRNYICEAWKIGLQFFADENGIITRQEIQRKVLTLLKNDDIRSNSLKLKEVARK 438 (468)
Q Consensus 375 ~~P~~~DQ~~na~rv~~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~~~~r~~a~~l~~~~~~ 438 (468)
++|...||..||.++++. |+|+.++..+ ++++.|.++|+++|+|+++|++++++++++.+
T Consensus 325 ~~p~~~~q~~~a~~~~~~-g~g~~~~~~~---~~~~~l~~ai~~ll~~~~~~~~~~~~~~~~~~ 384 (398)
T 4fzr_A 325 SVPVIAEVWDSARLLHAA-GAGVEVPWEQ---AGVESVLAACARIRDDSSYVGNARRLAAEMAT 384 (398)
T ss_dssp ECCCSGGGHHHHHHHHHT-TSEEECC----------CHHHHHHHHHHCTHHHHHHHHHHHHHTT
T ss_pred ecCCchhHHHHHHHHHHc-CCEEecCccc---CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHc
Confidence 999999999999999995 9999998877 89999999999999999999999999999877
|
| >3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-37 Score=300.31 Aligned_cols=346 Identities=15% Similarity=0.190 Sum_probs=236.4
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCCCCCCCc-------
Q 012212 3 RQPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDGLELQA------- 75 (468)
Q Consensus 3 ~~~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~------- 75 (468)
++|||+|++.++.||++|+++||++|.++||+|+++++ .+.+.+.. .++.+..++.......
T Consensus 19 ~~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~~----------~G~~~~~~~~~~~~~~~~~~~~~ 87 (398)
T 3oti_A 19 RHMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAAA----------AGLEVVDVAPDYSAVKVFEQVAK 87 (398)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHHT----------TTCEEEESSTTCCHHHHHHHHHH
T ss_pred hcCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHHh----------CCCeeEecCCccCHHHHhhhccc
Confidence 46899999999999999999999999999999999999 87777776 5688888875421000
Q ss_pred -----------CCCCCHHHHHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCcccHHHHHHHhCCceEEEcccchH
Q 012212 76 -----------ADREDPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVGSALEVAESMGIARAAVVPFGPG 144 (468)
Q Consensus 76 -----------~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~lgiP~v~~~~~~~~ 144 (468)
............+.......+.++.+.+++ ++||+||+|....++..+|+.+|||++.....+..
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~~~~ 163 (398)
T 3oti_A 88 DNPRFAETVATRPAIDLEEWGVQIAAVNRPLVDGTMALVDD----YRPDLVVYEQGATVGLLAADRAGVPAVQRNQSAWR 163 (398)
T ss_dssp HCHHHHHTGGGSCCCSGGGGHHHHHHHHGGGHHHHHHHHHH----HCCSEEEEETTCHHHHHHHHHHTCCEEEECCTTCC
T ss_pred CCccccccccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHH----cCCCEEEECchhhHHHHHHHHcCCCEEEEeccCCC
Confidence 001112222222333333444555555554 56999999988888999999999999976532210
Q ss_pred HHHHHhhhhhHhhcCCCCCCCcccccCCcccccCCCccCcccccCcCCCCCChhHHHHHHHHHHHHHh----hccccEEE
Q 012212 145 SLALSLQFPKLLEAGIIDPNGFAILNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQA----VKISNWII 220 (468)
Q Consensus 145 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l 220 (468)
.... .......+....+. ....+..+
T Consensus 164 ~~~~--------------------------------------------------~~~~~~~l~~~~~~~~~~~~~~~~~~ 193 (398)
T 3oti_A 164 TRGM--------------------------------------------------HRSIASFLTDLMDKHQVSLPEPVATI 193 (398)
T ss_dssp CTTH--------------------------------------------------HHHHHTTCHHHHHHTTCCCCCCSEEE
T ss_pred ccch--------------------------------------------------hhHHHHHHHHHHHHcCCCCCCCCeEE
Confidence 0000 00000000001111 11235555
Q ss_pred EcCcccCChhhhccCCCceeeccccCCCCCCCCCCCCCCCCCchhhhhhcccCccEEEEEecccccC--CHHHHHHHHHH
Q 012212 221 NNSVYELDSPACDLIPNILPIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVL--SQQQFAELALG 298 (468)
Q Consensus 221 ~~~~~~le~~~~~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~--~~~~~~~~~~a 298 (468)
....+.+..+.......+.++ |. . .+..+.+|+...+++++||+++||.... ..+.+..++++
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~-~~--~------------~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~ 258 (398)
T 3oti_A 194 ESFPPSLLLEAEPEGWFMRWV-PY--G------------GGAVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAA 258 (398)
T ss_dssp CSSCGGGGTTSCCCSBCCCCC-CC--C------------CCEECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHH
T ss_pred EeCCHHHCCCCCCCCCCcccc-CC--C------------CCcCCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHH
Confidence 555555544310111111111 10 0 1222335665555677999999998432 56778899999
Q ss_pred HHhCCCCEEEEEcCCCCCCcccCCchhHHHHhCCCceEEcccChHHHhcCCCCCceeeccCchhHHHhhhcCCceecccc
Q 012212 299 LESLQKPFLWVIRQDFMNGSRAKFPDGFIERVSNRGKIVEWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPY 378 (468)
Q Consensus 299 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~ 378 (468)
+.+.+.+++|+.++. .. +.+ +..++|+++.+|+|+.++|.++++ ||||||.||+.||+++|+|+|++|.
T Consensus 259 l~~~~~~~v~~~g~~----~~----~~l-~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Eal~~G~P~v~~p~ 327 (398)
T 3oti_A 259 AGEVDADFVLALGDL----DI----SPL-GTLPRNVRAVGWTPLHTLLRTCTA--VVHHGGGGTVMTAIDAGIPQLLAPD 327 (398)
T ss_dssp HHTSSSEEEEECTTS----CC----GGG-CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCC
T ss_pred HHcCCCEEEEEECCc----Ch----hhh-ccCCCcEEEEccCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEcCC
Confidence 998888988887754 11 111 123688999999999999977655 9999999999999999999999999
Q ss_pred ccchhhhH--HHHHHHhhceeEeeccCCCccCHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHhcCCCchHHHHH
Q 012212 379 FSDQYQNR--NYICEAWKIGLQFFADENGIITRQEIQRKVLTLLKNDDIRSNSLKLKEVARKSLLGGGSSFRNFE 451 (468)
Q Consensus 379 ~~DQ~~na--~rv~~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~ 451 (468)
..||..|| .++++. |+|+.++..+ .+++.|. ++|+|++||++++++++++.+ ..+..+.++
T Consensus 328 ~~dq~~~a~~~~~~~~-g~g~~~~~~~---~~~~~l~----~ll~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 390 (398)
T 3oti_A 328 PRDQFQHTAREAVSRR-GIGLVSTSDK---VDADLLR----RLIGDESLRTAAREVREEMVA----LPTPAETVR 390 (398)
T ss_dssp TTCCSSCTTHHHHHHH-TSEEECCGGG---CCHHHHH----HHHHCHHHHHHHHHHHHHHHT----SCCHHHHHH
T ss_pred CchhHHHHHHHHHHHC-CCEEeeCCCC---CCHHHHH----HHHcCHHHHHHHHHHHHHHHh----CCCHHHHHH
Confidence 99999999 999995 9999998876 7888776 899999999999999999987 444444333
|
| >3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-36 Score=293.42 Aligned_cols=352 Identities=12% Similarity=0.150 Sum_probs=239.1
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEc-CCCCCCCcC------
Q 012212 4 QPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTI-PDGLELQAA------ 76 (468)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~------ 76 (468)
+|||+|++.++.||++|+..||++|.++||+|++++++.+.+.+.. .++.+..+ .........
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~----------~g~~~~~~~~~~~~~~~~~~~~~~ 70 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAHG----------AGLTTAGIRGNDRTGDTGGTTQLR 70 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHHHH----------BTCEEEEC--------------CC
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHHHh----------CCCceeeecCCccchhhhhhhccc
Confidence 4799999999999999999999999999999999999887777777 45666666 321100000
Q ss_pred ------CCCCHHHHHHHHHHHhhHH-------HHHHHHHHhhCCCCCCceEEEecCCcccHHHHHHHhCCceEEEcccch
Q 012212 77 ------DREDPLKLGESVARAMRGC-------LRDLIEKINQSNDCEPIRCVIADVTVGSALEVAESMGIARAAVVPFGP 143 (468)
Q Consensus 77 ------~~~~~~~~~~~~~~~~~~~-------~~~ll~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~lgiP~v~~~~~~~ 143 (468)
...........+....... +.++.+.+++ .+||+|++|...+++..+|+.+|||++.+.....
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~ 146 (391)
T 3tsa_A 71 FPNPAFGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEA----WRPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVD 146 (391)
T ss_dssp SCCGGGGCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HCCSEEEEETTCHHHHHHHHHTTCCEEEECCSCC
T ss_pred ccccccccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHh----cCCCEEEeCcchhHHHHHHHHhCCCEEEEecCCc
Confidence 0001112222222222222 5555555554 5699999998777888999999999998764321
Q ss_pred HHHHHHhhhhhHhhcCCCCCCCcccccCCcccccCCCccCcccccCcCCCCCChhHHHHHHHHHHHHHhhc-----cccE
Q 012212 144 GSLALSLQFPKLLEAGIIDPNGFAILNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVK-----ISNW 218 (468)
Q Consensus 144 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 218 (468)
.... ...........+...... ..+.
T Consensus 147 ~~~~-------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (391)
T 3tsa_A 147 PTAG-------------------------------------------------PFSDRAHELLDPVCRHHGLTGLPTPEL 177 (391)
T ss_dssp CTTT-------------------------------------------------HHHHHHHHHHHHHHHHTTSSSSCCCSE
T ss_pred cccc-------------------------------------------------cccchHHHHHHHHHHHcCCCCCCCCce
Confidence 0000 000011111122222222 2266
Q ss_pred EEEcCcccCChhhhccCCCceeeccccCCCCCCCCCCCCCCCCCchhhhhhcccCccEEEEEeccccc--CC-HHHHHHH
Q 012212 219 IINNSVYELDSPACDLIPNILPIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAV--LS-QQQFAEL 295 (468)
Q Consensus 219 ~l~~~~~~le~~~~~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~--~~-~~~~~~~ 295 (468)
.+..+.++++.+.......+.++ |.. .+..+..|+...+++++||+++||... .. ..++..+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~-p~~--------------~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~ 242 (391)
T 3tsa_A 178 ILDPCPPSLQASDAPQGAPVQYV-PYN--------------GSGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAV 242 (391)
T ss_dssp EEECSCGGGSCTTSCCCEECCCC-CCC--------------CCEECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHH
T ss_pred EEEecChhhcCCCCCccCCeeee-cCC--------------CCcCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHH
Confidence 67777777665421111122233 110 122233566655667899999999832 23 7788888
Q ss_pred HHHHHhC-CCCEEEEEcCCCCCCcccCCchhHHHHhCCCceEEcccChHHHhcCCCCCceeeccCchhHHHhhhcCCcee
Q 012212 296 ALGLESL-QKPFLWVIRQDFMNGSRAKFPDGFIERVSNRGKIVEWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFL 374 (468)
Q Consensus 296 ~~a~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v 374 (468)
+++ .+. +.+++|+.++. ....+. ..++|+++.+|+|+.+++.++ ++||||||.||+.||+++|+|+|
T Consensus 243 ~~~-~~~p~~~~v~~~~~~----~~~~l~-----~~~~~v~~~~~~~~~~ll~~a--d~~v~~~G~~t~~Ea~~~G~P~v 310 (391)
T 3tsa_A 243 AAA-TELPGVEAVIAVPPE----HRALLT-----DLPDNARIAESVPLNLFLRTC--ELVICAGGSGTAFTATRLGIPQL 310 (391)
T ss_dssp HHH-HTSTTEEEEEECCGG----GGGGCT-----TCCTTEEECCSCCGGGTGGGC--SEEEECCCHHHHHHHHHTTCCEE
T ss_pred HHh-ccCCCeEEEEEECCc----chhhcc-----cCCCCEEEeccCCHHHHHhhC--CEEEeCCCHHHHHHHHHhCCCEE
Confidence 888 877 66777776543 111121 236889999999999999555 55999999999999999999999
Q ss_pred ccccccchhhhHHHHHHHhhceeEeec--cCCCccCHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHhcCCCchHHHHHH
Q 012212 375 CWPYFSDQYQNRNYICEAWKIGLQFFA--DENGIITRQEIQRKVLTLLKNDDIRSNSLKLKEVARKSLLGGGSSFRNFES 452 (468)
Q Consensus 375 ~~P~~~DQ~~na~rv~~~lG~g~~l~~--~~~~~~t~~~l~~ai~~~l~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~ 452 (468)
++|...||..|+.++++. |+|+.++. ++ .+.+.|.++|.++|+|++++++++++++++.+ .+++.+.++.
T Consensus 311 ~~p~~~~q~~~a~~~~~~-g~g~~~~~~~~~---~~~~~l~~ai~~ll~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 382 (391)
T 3tsa_A 311 VLPQYFDQFDYARNLAAA-GAGICLPDEQAQ---SDHEQFTDSIATVLGDTGFAAAAIKLSDEITA----MPHPAALVRT 382 (391)
T ss_dssp ECCCSTTHHHHHHHHHHT-TSEEECCSHHHH---TCHHHHHHHHHHHHTCTHHHHHHHHHHHHHHT----SCCHHHHHHH
T ss_pred ecCCcccHHHHHHHHHHc-CCEEecCccccc---CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHc----CCCHHHHHHH
Confidence 999999999999999995 99999987 66 89999999999999999999999999999977 5555444443
Q ss_pred H
Q 012212 453 F 453 (468)
Q Consensus 453 ~ 453 (468)
+
T Consensus 383 i 383 (391)
T 3tsa_A 383 L 383 (391)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-33 Score=275.78 Aligned_cols=359 Identities=18% Similarity=0.217 Sum_probs=244.7
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCCCC-----------
Q 012212 3 RQPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDGL----------- 71 (468)
Q Consensus 3 ~~~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~----------- 71 (468)
.+|||+|++.++.||++|++.||++|.++||+|++++++...+.+.. .++.+..++...
T Consensus 19 ~~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~----------~g~~~~~~~~~~~~~~~~~~~~~ 88 (412)
T 3otg_A 19 RHMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLRK----------LGFEPVATGMPVFDGFLAALRIR 88 (412)
T ss_dssp CSCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHH----------TTCEEEECCCCHHHHHHHHHHHH
T ss_pred ceeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHHHh----------cCCceeecCcccccchhhhhhhh
Confidence 46899999999999999999999999999999999999877666666 568888887410
Q ss_pred -CCCcCCCCCHH----HHHHHHHHH-hhHHHHHHHHHHhhCCCCCCceEEEecCCcccHHHHHHHhCCceEEEcccchHH
Q 012212 72 -ELQAADREDPL----KLGESVARA-MRGCLRDLIEKINQSNDCEPIRCVIADVTVGSALEVAESMGIARAAVVPFGPGS 145 (468)
Q Consensus 72 -~~~~~~~~~~~----~~~~~~~~~-~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~ 145 (468)
........... .....+... ....+..+.+.+++ .+||+||+|....++..+|+.+|||++.........
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~~~~ 164 (412)
T 3otg_A 89 FDTDSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIER----LRPDLVVQEISNYGAGLAALKAGIPTICHGVGRDTP 164 (412)
T ss_dssp HSCSCCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHH----HCCSEEEEETTCHHHHHHHHHHTCCEEEECCSCCCC
T ss_pred hcccCCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHh----cCCCEEEECchhhHHHHHHHHcCCCEEEecccccCc
Confidence 00000000011 111122211 12223444444443 569999999877788889999999999865432210
Q ss_pred HHHHhhhhhHhhcCCCCCCCcccccCCcccccCCCccCcccccCcCCCCCChhHHHHHHHHHHHHHh----------hcc
Q 012212 146 LALSLQFPKLLEAGIIDPNGFAILNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQA----------VKI 215 (468)
Q Consensus 146 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~ 215 (468)
... .......+.+.... ...
T Consensus 165 ~~~--------------------------------------------------~~~~~~~~~~~~~~~g~~~~~~~~~~~ 194 (412)
T 3otg_A 165 DDL--------------------------------------------------TRSIEEEVRGLAQRLGLDLPPGRIDGF 194 (412)
T ss_dssp SHH--------------------------------------------------HHHHHHHHHHHHHHTTCCCCSSCCGGG
T ss_pred hhh--------------------------------------------------hHHHHHHHHHHHHHcCCCCCcccccCC
Confidence 000 00011111111111 124
Q ss_pred ccEEEEcCcccCChhhhccCCCceeeccccCCCCCCCCCCCCCCCCCchhhh-hhcccCccEEEEEecccccCCHHHHHH
Q 012212 216 SNWIINNSVYELDSPACDLIPNILPIGPLLASNHSGDLDGNFWSEDSSCLSW-LDEQAIRSVVYVAFGSVAVLSQQQFAE 294 (468)
Q Consensus 216 ~~~~l~~~~~~le~~~~~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~l~~~-l~~~~~~~vv~vs~Gs~~~~~~~~~~~ 294 (468)
++.++..+.+.++.+..........+.+.... ......+| ....+++++||+++|+......+.+..
T Consensus 195 ~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~ 262 (412)
T 3otg_A 195 GNPFIDIFPPSLQEPEFRARPRRHELRPVPFA------------EQGDLPAWLSSRDTARPLVYLTLGTSSGGTVEVLRA 262 (412)
T ss_dssp GCCEEECSCGGGSCHHHHTCTTEEECCCCCCC------------CCCCCCGGGGGSCTTSCEEEEECTTTTCSCHHHHHH
T ss_pred CCeEEeeCCHHhcCCcccCCCCcceeeccCCC------------CCCCCCCccccccCCCCEEEEEcCCCCcCcHHHHHH
Confidence 56677777777766532222211111111111 11223345 232345679999999986667888999
Q ss_pred HHHHHHhCCCCEEEEEcCCCCCCcccCCchhHHHHhCCCceEEcccChHHHhcCCCCCceeeccCchhHHHhhhcCCcee
Q 012212 295 LALGLESLQKPFLWVIRQDFMNGSRAKFPDGFIERVSNRGKIVEWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFL 374 (468)
Q Consensus 295 ~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v 374 (468)
+++++.+.+.+++|+.++... ...+. ..++|+++.+|+|+.++|+++++ ||+|||+||+.||+++|+|+|
T Consensus 263 ~~~~l~~~~~~~~~~~g~~~~---~~~l~-----~~~~~v~~~~~~~~~~~l~~ad~--~v~~~g~~t~~Ea~a~G~P~v 332 (412)
T 3otg_A 263 AIDGLAGLDADVLVASGPSLD---VSGLG-----EVPANVRLESWVPQAALLPHVDL--VVHHGGSGTTLGALGAGVPQL 332 (412)
T ss_dssp HHHHHHTSSSEEEEECCSSCC---CTTCC-----CCCTTEEEESCCCHHHHGGGCSE--EEESCCHHHHHHHHHHTCCEE
T ss_pred HHHHHHcCCCEEEEEECCCCC---hhhhc-----cCCCcEEEeCCCCHHHHHhcCcE--EEECCchHHHHHHHHhCCCEE
Confidence 999999888888888876510 11111 23678899999999999977665 999999999999999999999
Q ss_pred ccccccchhhhHHHHHHHhhceeEeeccCCCccCHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHhcCCCchHHHHHHHH
Q 012212 375 CWPYFSDQYQNRNYICEAWKIGLQFFADENGIITRQEIQRKVLTLLKNDDIRSNSLKLKEVARKSLLGGGSSFRNFESFI 454 (468)
Q Consensus 375 ~~P~~~DQ~~na~rv~~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~ 454 (468)
++|...||..|+.++++. |.|+.++..+ .++++|.++|.++|+|+++++++.+.++++.+ ..+..+.++.+.
T Consensus 333 ~~p~~~~q~~~~~~v~~~-g~g~~~~~~~---~~~~~l~~ai~~ll~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 404 (412)
T 3otg_A 333 SFPWAGDSFANAQAVAQA-GAGDHLLPDN---ISPDSVSGAAKRLLAEESYRAGARAVAAEIAA----MPGPDEVVRLLP 404 (412)
T ss_dssp ECCCSTTHHHHHHHHHHH-TSEEECCGGG---CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH----SCCHHHHHTTHH
T ss_pred ecCCchhHHHHHHHHHHc-CCEEecCccc---CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHhc----CCCHHHHHHHHH
Confidence 999999999999999995 9999999876 89999999999999999999999999999887 445444444443
Q ss_pred H
Q 012212 455 S 455 (468)
Q Consensus 455 ~ 455 (468)
+
T Consensus 405 ~ 405 (412)
T 3otg_A 405 G 405 (412)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.6e-29 Score=239.06 Aligned_cols=324 Identities=13% Similarity=0.074 Sum_probs=195.1
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchH--HHHHhhhhhccCCCCCeEEEEcCCCCCCCcCCC
Q 012212 1 MSRQPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHK--KIIASLQEKAEDSSSQIKLVTIPDGLELQAADR 78 (468)
Q Consensus 1 m~~~~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~--~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 78 (468)
|++ ||++...++.||++|.++||++|.++||+|+|+++....+ .+.+ .++.++.++..-.......
T Consensus 1 M~~--~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~----------~g~~~~~i~~~~~~~~~~~ 68 (365)
T 3s2u_A 1 MKG--NVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPK----------AGLPLHLIQVSGLRGKGLK 68 (365)
T ss_dssp --C--EEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGG----------GTCCEEECC----------
T ss_pred CCC--cEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhh----------cCCcEEEEECCCcCCCCHH
Confidence 554 9999988888999999999999999999999999875432 2333 4577777763211111011
Q ss_pred CCHHHHHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCcc--cHHHHHHHhCCceEEEcccchHHHHHHhhhhhHh
Q 012212 79 EDPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVG--SALEVAESMGIARAAVVPFGPGSLALSLQFPKLL 156 (468)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~ 156 (468)
..+...+..+ .... ....++++ .+||+||.+.... .+..+|+.+|||+++.-..
T Consensus 69 ~~~~~~~~~~-~~~~-~~~~~l~~-------~~PDvVi~~g~~~s~p~~laA~~~~iP~vihe~n--------------- 124 (365)
T 3s2u_A 69 SLVKAPLELL-KSLF-QALRVIRQ-------LRPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQN--------------- 124 (365)
T ss_dssp ----CHHHHH-HHHH-HHHHHHHH-------HCCSEEEECSSSTHHHHHHHHHHTTCCEEEEECS---------------
T ss_pred HHHHHHHHHH-HHHH-HHHHHHHh-------cCCCEEEEcCCcchHHHHHHHHHcCCCEEEEecc---------------
Confidence 1111112211 1111 12344444 5699999997655 4557899999999863210
Q ss_pred hcCCCCCCCcccccCCcccccCCCccCcccccCcCCCCCChhHHHHHHHHHHHHHhhccccEEEEcCcccCChhhhccCC
Q 012212 157 EAGIIDPNGFAILNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACDLIP 236 (468)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~~~~~p 236 (468)
..|+.. + +.. .+.++.++... ++. .+...
T Consensus 125 -------------------~~~G~~----------------------n---r~l--~~~a~~v~~~~-~~~----~~~~~ 153 (365)
T 3s2u_A 125 -------------------AVAGTA----------------------N---RSL--APIARRVCEAF-PDT----FPASD 153 (365)
T ss_dssp -------------------SSCCHH----------------------H---HHH--GGGCSEEEESS-TTS----SCC--
T ss_pred -------------------hhhhhH----------------------H---Hhh--ccccceeeecc-ccc----ccCcC
Confidence 001000 0 000 11233333322 211 12234
Q ss_pred CceeeccccCCCCCCCCCCCCCCCCCchhhhhhcccCccEEEEEecccccCCHHHHHHHHHHHHhCC----CCEEEEEcC
Q 012212 237 NILPIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALGLESLQ----KPFLWVIRQ 312 (468)
Q Consensus 237 ~v~~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~a~~~~~----~~~l~~~~~ 312 (468)
+..++|.......... .. .+....+++++|++..||... ....+.+.+++..+. ..++++++.
T Consensus 154 k~~~~g~pvr~~~~~~-------~~----~~~~~~~~~~~ilv~gGs~g~--~~~~~~~~~al~~l~~~~~~~vi~~~G~ 220 (365)
T 3s2u_A 154 KRLTTGNPVRGELFLD-------AH----ARAPLTGRRVNLLVLGGSLGA--EPLNKLLPEALAQVPLEIRPAIRHQAGR 220 (365)
T ss_dssp -CEECCCCCCGGGCCC-------TT----SSCCCTTSCCEEEECCTTTTC--SHHHHHHHHHHHTSCTTTCCEEEEECCT
T ss_pred cEEEECCCCchhhccc-------hh----hhcccCCCCcEEEEECCcCCc--cccchhhHHHHHhcccccceEEEEecCc
Confidence 5666775443322110 00 011122345689998888743 233445666766543 345555543
Q ss_pred CCCCCcccCCchhHHHHhCCCceEEcccCh-HHHhcCCCCCceeeccCchhHHHhhhcCCceeccccc----cchhhhHH
Q 012212 313 DFMNGSRAKFPDGFIERVSNRGKIVEWAPQ-EKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYF----SDQYQNRN 387 (468)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~-~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~~----~DQ~~na~ 387 (468)
. ..+.+ .......+.++.+.+|+++ .++++.+++ +|||+|.+|+.|++++|+|+|++|+. .+|..||+
T Consensus 221 ~----~~~~~-~~~~~~~~~~~~v~~f~~dm~~~l~~aDl--vI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~ 293 (365)
T 3s2u_A 221 Q----HAEIT-AERYRTVAVEADVAPFISDMAAAYAWADL--VICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAE 293 (365)
T ss_dssp T----THHHH-HHHHHHTTCCCEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHHH
T ss_pred c----ccccc-cceecccccccccccchhhhhhhhccceE--EEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHH
Confidence 3 11111 1112334678999999987 578966655 99999999999999999999999863 58999999
Q ss_pred HHHHHhhceeEeeccCCCccCHHHHHHHHHHHhcChHHHHHHHHHHHHHHH
Q 012212 388 YICEAWKIGLQFFADENGIITRQEIQRKVLTLLKNDDIRSNSLKLKEVARK 438 (468)
Q Consensus 388 rv~~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~~~~r~~a~~l~~~~~~ 438 (468)
.+++. |+|+.++.++ +|++.|.++|.++|+|++.++ +|++..++
T Consensus 294 ~l~~~-G~a~~l~~~~---~~~~~L~~~i~~ll~d~~~~~---~m~~~a~~ 337 (365)
T 3s2u_A 294 FLVRS-GAGRLLPQKS---TGAAELAAQLSEVLMHPETLR---SMADQARS 337 (365)
T ss_dssp HHHTT-TSEEECCTTT---CCHHHHHHHHHHHHHCTHHHH---HHHHHHHH
T ss_pred HHHHC-CCEEEeecCC---CCHHHHHHHHHHHHCCHHHHH---HHHHHHHh
Confidence 99996 9999999877 999999999999999988655 44455554
|
| >2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=8.5e-29 Score=211.63 Aligned_cols=164 Identities=20% Similarity=0.415 Sum_probs=141.5
Q ss_pred CCCCchhhhhhcccCccEEEEEecccc-cCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCcccCCchhHHHHhCCCceEE
Q 012212 259 SEDSSCLSWLDEQAIRSVVYVAFGSVA-VLSQQQFAELALGLESLQKPFLWVIRQDFMNGSRAKFPDGFIERVSNRGKIV 337 (468)
Q Consensus 259 ~~~~~l~~~l~~~~~~~vv~vs~Gs~~-~~~~~~~~~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~ 337 (468)
+.++++.+|++..+++++||+++||.. ....+.+..+++++.+.+.+++|+.++. . ++. .++|+++.
T Consensus 6 ~l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~----~----~~~----~~~~v~~~ 73 (170)
T 2o6l_A 6 PLPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGN----K----PDT----LGLNTRLY 73 (170)
T ss_dssp CCCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSS----C----CTT----CCTTEEEE
T ss_pred CCCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCc----C----ccc----CCCcEEEe
Confidence 477889999987767789999999984 4577888999999998888899888654 1 111 26788999
Q ss_pred cccChHHHhcCCCCCceeeccCchhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeeccCCCccCHHHHHHHHH
Q 012212 338 EWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGIITRQEIQRKVL 417 (468)
Q Consensus 338 ~~~p~~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~~~~~~t~~~l~~ai~ 417 (468)
+|+||.+++.|+.+++||||||+||++||+++|+|+|++|...||..||.++++. |+|+.++..+ ++.++|.++|.
T Consensus 74 ~~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~-g~g~~~~~~~---~~~~~l~~~i~ 149 (170)
T 2o6l_A 74 KWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKAR-GAAVRVDFNT---MSSTDLLNALK 149 (170)
T ss_dssp SSCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTT-TSEEECCTTT---CCHHHHHHHHH
T ss_pred cCCCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHHc-CCeEEecccc---CCHHHHHHHHH
Confidence 9999999998888899999999999999999999999999999999999999995 9999998776 89999999999
Q ss_pred HHhcChHHHHHHHHHHHHHHH
Q 012212 418 TLLKNDDIRSNSLKLKEVARK 438 (468)
Q Consensus 418 ~~l~~~~~r~~a~~l~~~~~~ 438 (468)
++|+|++||++++++++++++
T Consensus 150 ~ll~~~~~~~~a~~~~~~~~~ 170 (170)
T 2o6l_A 150 RVINDPSYKENVMKLSRIQHD 170 (170)
T ss_dssp HHHHCHHHHHHHHHHC-----
T ss_pred HHHcCHHHHHHHHHHHHHhhC
Confidence 999999999999999998864
|
| >1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=8.2e-22 Score=189.73 Aligned_cols=339 Identities=14% Similarity=0.056 Sum_probs=202.5
Q ss_pred CCC-C-CEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchH--HHHHhhhhhccCCCCCeEEEEcCCCCCCCcC
Q 012212 1 MSR-Q-PHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHK--KIIASLQEKAEDSSSQIKLVTIPDGLELQAA 76 (468)
Q Consensus 1 m~~-~-~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~--~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 76 (468)
||+ | |||++++.+..||..++..||++|.++||+|++++...... .+.. .++.+..++.....
T Consensus 1 mM~~m~mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~----------~g~~~~~~~~~~~~--- 67 (364)
T 1f0k_A 1 MMSGQGKRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPK----------HGIEIDFIRISGLR--- 67 (364)
T ss_dssp ------CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGG----------GTCEEEECCCCCCT---
T ss_pred CCCCCCcEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhccc----------cCCceEEecCCccC---
Confidence 544 4 89999987777999999999999999999999999875422 2222 35777766532111
Q ss_pred CCCCHHHHHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCcc--cHHHHHHHhCCceEEEcccchHHHHHHhhhhh
Q 012212 77 DREDPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVG--SALEVAESMGIARAAVVPFGPGSLALSLQFPK 154 (468)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~ 154 (468)
.......+....... ..+..+.+.+++ .+||+|+++.... .+..+++.+|+|++.......
T Consensus 68 -~~~~~~~~~~~~~~~-~~~~~l~~~l~~----~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~~----------- 130 (364)
T 1f0k_A 68 -GKGIKALIAAPLRIF-NAWRQARAIMKA----YKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNGI----------- 130 (364)
T ss_dssp -TCCHHHHHTCHHHHH-HHHHHHHHHHHH----HCCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSSS-----------
T ss_pred -cCccHHHHHHHHHHH-HHHHHHHHHHHh----cCCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCCC-----------
Confidence 111111111111111 123333444443 4699999996542 456678889999986432100
Q ss_pred HhhcCCCCCCCcccccCCcccccCCCccCcccccCcCCCCCChhHHHHHHHHHHHHHhhccccEEEEcCcccCChhhhcc
Q 012212 155 LLEAGIIDPNGFAILNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACDL 234 (468)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~~~~ 234 (468)
++ . .. +. ....++.++..+...
T Consensus 131 -----------------------~~------------------~----~~---~~--~~~~~d~v~~~~~~~-------- 152 (364)
T 1f0k_A 131 -----------------------AG------------------L----TN---KW--LAKIATKVMQAFPGA-------- 152 (364)
T ss_dssp -----------------------CC------------------H----HH---HH--HTTTCSEEEESSTTS--------
T ss_pred -----------------------Cc------------------H----HH---HH--HHHhCCEEEecChhh--------
Confidence 00 0 00 00 022455666544322
Q ss_pred CCCceeeccccCCCCCCCCCCCCCCCCCchhhhhhcccCccEEEEEecccccCCHHHHHHHHHHHHhC--CCCEEEEEcC
Q 012212 235 IPNILPIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALGLESL--QKPFLWVIRQ 312 (468)
Q Consensus 235 ~p~v~~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~a~~~~--~~~~l~~~~~ 312 (468)
.+++..+|......... .+. ....+...+++++|++..|+.. .......+++++..+ +.+++++++.
T Consensus 153 ~~~~~~i~n~v~~~~~~--------~~~-~~~~~~~~~~~~~il~~~g~~~--~~k~~~~li~a~~~l~~~~~~l~i~G~ 221 (364)
T 1f0k_A 153 FPNAEVVGNPVRTDVLA--------LPL-PQQRLAGREGPVRVLVVGGSQG--ARILNQTMPQVAAKLGDSVTIWHQSGK 221 (364)
T ss_dssp SSSCEECCCCCCHHHHT--------SCC-HHHHHTTCCSSEEEEEECTTTC--CHHHHHHHHHHHHHHGGGEEEEEECCT
T ss_pred cCCceEeCCccchhhcc--------cch-hhhhcccCCCCcEEEEEcCchH--hHHHHHHHHHHHHHhcCCcEEEEEcCC
Confidence 12455555422211100 000 1112222234457777777763 344455566666544 3455566654
Q ss_pred CCCCCcccCCchhHHH---HhC-CCceEEcccCh-HHHhcCCCCCceeeccCchhHHHhhhcCCceeccccc---cchhh
Q 012212 313 DFMNGSRAKFPDGFIE---RVS-NRGKIVEWAPQ-EKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYF---SDQYQ 384 (468)
Q Consensus 313 ~~~~~~~~~~~~~~~~---~~~-~nv~~~~~~p~-~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~~---~DQ~~ 384 (468)
+ . .+.+.+ +.. +||++.+|+++ ..++..+++ +|+++|.+++.||+++|+|+|+.+.. .||..
T Consensus 222 ~----~----~~~l~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~--~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~ 291 (364)
T 1f0k_A 222 G----S----QQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADV--VVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYW 291 (364)
T ss_dssp T----C----HHHHHHHHHHTTCTTSEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHH
T ss_pred c----h----HHHHHHHHhhcCCCceEEecchhhHHHHHHhCCE--EEECCchHHHHHHHHhCCCEEEeeCCCCchhHHH
Confidence 4 1 123322 222 58999999954 778876666 99999999999999999999999987 79999
Q ss_pred hHHHHHHHhhceeEeeccCCCccCHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHH
Q 012212 385 NRNYICEAWKIGLQFFADENGIITRQEIQRKVLTLLKNDDIRSNSLKLKEVARKSLLGGGSSFRNFESFISDIK 458 (468)
Q Consensus 385 na~rv~~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 458 (468)
|+..+.+. |.|+.++..+ .+.+++.++|.++ |++.+++..+-+.++. +..+..+.++.+.+.++
T Consensus 292 ~~~~~~~~-g~g~~~~~~d---~~~~~la~~i~~l--~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~y~ 355 (364)
T 1f0k_A 292 NALPLEKA-GAAKIIEQPQ---LSVDAVANTLAGW--SRETLLTMAERARAAS----IPDATERVANEVSRVAR 355 (364)
T ss_dssp HHHHHHHT-TSEEECCGGG---CCHHHHHHHHHTC--CHHHHHHHHHHHHHTC----CTTHHHHHHHHHHHHHT
T ss_pred HHHHHHhC-CcEEEecccc---CCHHHHHHHHHhc--CHHHHHHHHHHHHHhh----ccCHHHHHHHHHHHHHH
Confidence 99999996 9999998765 7799999999988 7887766555444332 23344444444444443
|
| >3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=7.7e-16 Score=140.19 Aligned_cols=116 Identities=10% Similarity=0.101 Sum_probs=87.5
Q ss_pred ccEEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCcccCCchhHHHHh--CCCceEEcccCh-HHHhcCCC
Q 012212 274 RSVVYVAFGSVAVLSQQQFAELALGLESLQKPFLWVIRQDFMNGSRAKFPDGFIERV--SNRGKIVEWAPQ-EKVLGHSS 350 (468)
Q Consensus 274 ~~vv~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~nv~~~~~~p~-~~ll~~~~ 350 (468)
.+.|+|++|+.. .......+++++.+.. ++.++++.. ....+.+.+.. .+|+.+.+|+++ .+++..++
T Consensus 157 ~~~ILv~~GG~d--~~~l~~~vl~~L~~~~-~i~vv~G~~------~~~~~~l~~~~~~~~~v~v~~~~~~m~~~m~~aD 227 (282)
T 3hbm_A 157 KYDFFICMGGTD--IKNLSLQIASELPKTK-IISIATSSS------NPNLKKLQKFAKLHNNIRLFIDHENIAKLMNESN 227 (282)
T ss_dssp CEEEEEECCSCC--TTCHHHHHHHHSCTTS-CEEEEECTT------CTTHHHHHHHHHTCSSEEEEESCSCHHHHHHTEE
T ss_pred CCeEEEEECCCc--hhhHHHHHHHHhhcCC-CEEEEECCC------chHHHHHHHHHhhCCCEEEEeCHHHHHHHHHHCC
Confidence 457999999753 2335667788876544 566676655 12223332221 358999999987 56886555
Q ss_pred CCceeeccCchhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeecc
Q 012212 351 VACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFAD 402 (468)
Q Consensus 351 ~~~~I~hGG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~ 402 (468)
+ +|++|| +|++|+++.|+|+|++|...+|..||..+++. |+++.+..-
T Consensus 228 l--vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~~-G~~~~~~~~ 275 (282)
T 3hbm_A 228 K--LIISAS-SLVNEALLLKANFKAICYVKNQESTATWLAKK-GYEVEYKYL 275 (282)
T ss_dssp E--EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHHHT-TCEEECGGG
T ss_pred E--EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHC-CCEEEcchh
Confidence 5 999999 89999999999999999999999999999995 999998763
|
| >2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A | Back alignment and structure |
|---|
Probab=99.59 E-value=2.6e-15 Score=130.99 Aligned_cols=131 Identities=11% Similarity=0.128 Sum_probs=92.8
Q ss_pred cCccEEEEEecccccCCHHHHHHH-----HHHHHhCC-CCEEEEEcCCCCCCcccCCchhHHHHh---------------
Q 012212 272 AIRSVVYVAFGSVAVLSQQQFAEL-----ALGLESLQ-KPFLWVIRQDFMNGSRAKFPDGFIERV--------------- 330 (468)
Q Consensus 272 ~~~~vv~vs~Gs~~~~~~~~~~~~-----~~a~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~--------------- 330 (468)
+++++|||+.||... -.+.+..+ ++++.+.+ .++++.++... .. ....+.+..
T Consensus 26 ~~~~~VlVtgGS~~~-~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~----~~-~~~~~~~~~~~~~~~~l~p~~~~~ 99 (224)
T 2jzc_A 26 IEEKALFVTCGATVP-FPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNY----SS-EFEHLVQERGGQRESQKIPIDQFG 99 (224)
T ss_dssp CCSCCEEEECCSCCS-CHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSS----CC-CCCSHHHHHTCEECSCCCSSCTTC
T ss_pred CCCCEEEEEcCCchH-HHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCc----hh-hHHHHHHhhhcccccccccccccc
Confidence 456789999999732 34444444 47887777 68888887651 10 111111111
Q ss_pred -----------CC--CceEEcccCh-HHHhc-CCCCCceeeccCchhHHHhhhcCCceeccccc----cchhhhHHHHHH
Q 012212 331 -----------SN--RGKIVEWAPQ-EKVLG-HSSVACFISHCGWNSTMEGLSMGVPFLCWPYF----SDQYQNRNYICE 391 (468)
Q Consensus 331 -----------~~--nv~~~~~~p~-~~ll~-~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~~----~DQ~~na~rv~~ 391 (468)
.. ++.+.+|+++ .++++ .+++ +|||||+||++|++++|+|+|++|.. .+|..||+++++
T Consensus 100 ~~~~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~ 177 (224)
T 2jzc_A 100 CGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVE 177 (224)
T ss_dssp TTCSCEEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHH
T ss_pred ccccccccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHH
Confidence 12 3345588877 57896 6666 99999999999999999999999974 469999999999
Q ss_pred HhhceeEeeccCCCccCHHHHHHHHHHH
Q 012212 392 AWKIGLQFFADENGIITRQEIQRKVLTL 419 (468)
Q Consensus 392 ~lG~g~~l~~~~~~~~t~~~l~~ai~~~ 419 (468)
. |+++.+ +.+.|.++|+++
T Consensus 178 ~-G~~~~~--------~~~~L~~~i~~l 196 (224)
T 2jzc_A 178 L-GYVWSC--------APTETGLIAGLR 196 (224)
T ss_dssp H-SCCCEE--------CSCTTTHHHHHH
T ss_pred C-CCEEEc--------CHHHHHHHHHHH
Confidence 5 998765 456677777776
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=1.7e-12 Score=125.77 Aligned_cols=351 Identities=13% Similarity=0.065 Sum_probs=187.1
Q ss_pred CCCCCEEEEEcC--C--CccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCCCCCCCcC
Q 012212 1 MSRQPHVLVIPY--P--AQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDGLELQAA 76 (468)
Q Consensus 1 m~~~~~Il~~~~--~--~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 76 (468)
|++||||++++. + ..|.-..+..|++.| +||+|++++........... ....++.+..++......
T Consensus 1 M~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~-- 70 (394)
T 3okp_A 1 MSASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAY------DKTLDYEVIRWPRSVMLP-- 70 (394)
T ss_dssp ---CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHH------HTTCSSEEEEESSSSCCS--
T ss_pred CCCCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhh------ccccceEEEEcccccccc--
Confidence 889999998864 2 458888999999999 79999999998765432222 112677888777532111
Q ss_pred CCCCHHHHHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCcc--cHHHHHHHhCCceEEEcccchHHHHHHhhhhh
Q 012212 77 DREDPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVG--SALEVAESMGIARAAVVPFGPGSLALSLQFPK 154 (468)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~ 154 (468)
.. .....+.++++. .+||+|++..... ....++..+++|.+++.........
T Consensus 71 ---~~---------~~~~~l~~~~~~-------~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~------- 124 (394)
T 3okp_A 71 ---TP---------TTAHAMAEIIRE-------REIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVGW------- 124 (394)
T ss_dssp ---CH---------HHHHHHHHHHHH-------TTCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHHH-------
T ss_pred ---ch---------hhHHHHHHHHHh-------cCCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhhh-------
Confidence 11 111123344444 5699999875544 4555678899984443322111000
Q ss_pred HhhcCCCCCCCcccccCCcccccCCCccCcccccCcCCCCCChhHHHHHHHHHHHHHhhccccEEEEcCcccCChhhhcc
Q 012212 155 LLEAGIIDPNGFAILNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACDL 234 (468)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~~~~ 234 (468)
.. ........ ...+..+|.++..+....+.-....
T Consensus 125 --------------------------------------~~-~~~~~~~~------~~~~~~~d~ii~~s~~~~~~~~~~~ 159 (394)
T 3okp_A 125 --------------------------------------SM-LPGSRQSL------RKIGTEVDVLTYISQYTLRRFKSAF 159 (394)
T ss_dssp --------------------------------------TT-SHHHHHHH------HHHHHHCSEEEESCHHHHHHHHHHH
T ss_pred --------------------------------------hh-cchhhHHH------HHHHHhCCEEEEcCHHHHHHHHHhc
Confidence 00 00000111 1123467888888775544332212
Q ss_pred --CCCceeeccccCCCCCCCCCCCCCCCCCchhhhhhcccCccEEEEEeccccc-CCHHHHHHHHHHHHhC--CCCEEEE
Q 012212 235 --IPNILPIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAV-LSQQQFAELALGLESL--QKPFLWV 309 (468)
Q Consensus 235 --~p~v~~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~-~~~~~~~~~~~a~~~~--~~~~l~~ 309 (468)
..++..+...+...... .........+.+.+... ++..+++..|+... -..+.+...+..+.+. +.++++
T Consensus 160 ~~~~~~~vi~ngv~~~~~~---~~~~~~~~~~~~~~~~~-~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l~i- 234 (394)
T 3okp_A 160 GSHPTFEHLPSGVDVKRFT---PATPEDKSATRKKLGFT-DTTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLI- 234 (394)
T ss_dssp CSSSEEEECCCCBCTTTSC---CCCHHHHHHHHHHTTCC-TTCCEEEEESCSCGGGCHHHHHHHHHHHHHHSTTCEEEE-
T ss_pred CCCCCeEEecCCcCHHHcC---CCCchhhHHHHHhcCCC-cCceEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEE-
Confidence 23444444333221111 00000011111222212 22256666787621 1223333333333222 334443
Q ss_pred EcCCCCCCcccCCchhHH---HHhCCCceEEcccChHH---HhcCCCCCceee-----------ccCchhHHHhhhcCCc
Q 012212 310 IRQDFMNGSRAKFPDGFI---ERVSNRGKIVEWAPQEK---VLGHSSVACFIS-----------HCGWNSTMEGLSMGVP 372 (468)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~---~~~~~nv~~~~~~p~~~---ll~~~~~~~~I~-----------hGG~~s~~eal~~GvP 372 (468)
++.+ .....+. ....++|++.+|+|+.+ ++..+++ +|. -|..+++.||+++|+|
T Consensus 235 ~G~g-------~~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~P 305 (394)
T 3okp_A 235 VGSG-------RYESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADI--FAMPARTRGGGLDVEGLGIVYLEAQACGVP 305 (394)
T ss_dssp ECCC-------TTHHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCSE--EEECCCCBGGGTBCCSSCHHHHHHHHTTCC
T ss_pred EcCc-------hHHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCCE--EEecCccccccccccccCcHHHHHHHcCCC
Confidence 3332 1222222 22357899999998755 5656655 776 5666899999999999
Q ss_pred eeccccccchhhhHHHHHHHhhceeEeeccCCCccCHHHHHHHHHHHhcChHHHHHHHHHHHH-HHHHhcCCCchHHHHH
Q 012212 373 FLCWPYFSDQYQNRNYICEAWKIGLQFFADENGIITRQEIQRKVLTLLKNDDIRSNSLKLKEV-ARKSLLGGGSSFRNFE 451 (468)
Q Consensus 373 ~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~~~~r~~a~~l~~~-~~~~~~~~g~~~~~~~ 451 (468)
+|+.+.. .....+.+ |.|+.++. -+.+++.++|.++++|++.+++..+-+.. .++ .=+.....+
T Consensus 306 vI~~~~~----~~~e~i~~--~~g~~~~~-----~d~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~----~~s~~~~~~ 370 (394)
T 3okp_A 306 VIAGTSG----GAPETVTP--ATGLVVEG-----SDVDKLSELLIELLDDPIRRAAMGAAGRAHVEA----EWSWEIMGE 370 (394)
T ss_dssp EEECSST----TGGGGCCT--TTEEECCT-----TCHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH----HTBHHHHHH
T ss_pred EEEeCCC----ChHHHHhc--CCceEeCC-----CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH----hCCHHHHHH
Confidence 9997642 33333333 57777765 46999999999999998855544333322 222 124456666
Q ss_pred HHHHHHHhhc
Q 012212 452 SFISDIKMLI 461 (468)
Q Consensus 452 ~~~~~~~~~~ 461 (468)
++++.++++.
T Consensus 371 ~~~~~~~~~~ 380 (394)
T 3okp_A 371 RLTNILQSEP 380 (394)
T ss_dssp HHHHHHHSCC
T ss_pred HHHHHHHHhc
Confidence 6666666554
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=5.8e-12 Score=123.89 Aligned_cols=343 Identities=13% Similarity=0.074 Sum_probs=173.9
Q ss_pred CCCCEEEEEcC-----------CCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCCC
Q 012212 2 SRQPHVLVIPY-----------PAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDG 70 (468)
Q Consensus 2 ~~~~~Il~~~~-----------~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~ 70 (468)
.+||||++++. ...|+-.....||++|.++||+|++++.......-... ....++.++.++..
T Consensus 18 ~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~------~~~~~v~v~~~~~~ 91 (438)
T 3c48_A 18 GSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIV------RVAENLRVINIAAG 91 (438)
T ss_dssp -CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCSEE------EEETTEEEEEECCS
T ss_pred cchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCcccc------cccCCeEEEEecCC
Confidence 46899999974 23588889999999999999999999976532110000 01156777777643
Q ss_pred CCCCcCCCCCHHHHHHHHHHHhhHHHHHHHHH-HhhCCCCCCceEEEecCCcc--cHHHHHHHhCCceEEEcccchHHHH
Q 012212 71 LELQAADREDPLKLGESVARAMRGCLRDLIEK-INQSNDCEPIRCVIADVTVG--SALEVAESMGIARAAVVPFGPGSLA 147 (468)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~-l~~~~~~~~pDlvi~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~ 147 (468)
..... ........+..+ ...+++. ++.. .+||+|++..... .+..+++.+++|+|..........
T Consensus 92 ~~~~~-~~~~~~~~~~~~-------~~~~~~~~~~~~---~~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~- 159 (438)
T 3c48_A 92 PYEGL-SKEELPTQLAAF-------TGGMLSFTRREK---VTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAAVK- 159 (438)
T ss_dssp CSSSC-CGGGGGGGHHHH-------HHHHHHHHHHHT---CCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSSCHHHH-
T ss_pred Ccccc-chhHHHHHHHHH-------HHHHHHHHHhcc---CCCCEEEeCCccHHHHHHHHHHHcCCCEEEEecCCcccc-
Confidence 21110 111111111111 1122222 2221 2499999875322 334567888999987665432110
Q ss_pred HHhhhhhHhhcCCCCCCCcccccCCcccccCCCccCcccccCcCCCCCChhHHHHHHHHHHHHHhhccccEEEEcCcccC
Q 012212 148 LSLQFPKLLEAGIIDPNGFAILNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYEL 227 (468)
Q Consensus 148 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 227 (468)
. .... ..... ........ ....+..+|.++..+....
T Consensus 160 ---~-------~~~~------------------------------~~~~~-~~~~~~~~--~~~~~~~~d~ii~~s~~~~ 196 (438)
T 3c48_A 160 ---N-------SYRD------------------------------DSDTP-ESEARRIC--EQQLVDNADVLAVNTQEEM 196 (438)
T ss_dssp ---S-------CC----------------------------------CCH-HHHHHHHH--HHHHHHHCSEEEESSHHHH
T ss_pred ---c-------cccc------------------------------ccCCc-chHHHHHH--HHHHHhcCCEEEEcCHHHH
Confidence 0 0000 00000 00000000 1122457888888887654
Q ss_pred Chhhhcc--C-CCceeeccccCCCCCCCCCCCCCCCCCc---hhhhhhcccCccEEEEEeccccc-CCHHHHHHHHHHHH
Q 012212 228 DSPACDL--I-PNILPIGPLLASNHSGDLDGNFWSEDSS---CLSWLDEQAIRSVVYVAFGSVAV-LSQQQFAELALGLE 300 (468)
Q Consensus 228 e~~~~~~--~-p~v~~vGpl~~~~~~~~~~~~~~~~~~~---l~~~l~~~~~~~vv~vs~Gs~~~-~~~~~~~~~~~a~~ 300 (468)
+.-...+ . .++..+...+...... . ..... +.+.+...++ ..+++..|+... -..+.+...+..+.
T Consensus 197 ~~~~~~~g~~~~k~~vi~ngvd~~~~~---~---~~~~~~~~~r~~~~~~~~-~~~i~~~G~~~~~Kg~~~li~a~~~l~ 269 (438)
T 3c48_A 197 QDLMHHYDADPDRISVVSPGADVELYS---P---GNDRATERSRRELGIPLH-TKVVAFVGRLQPFKGPQVLIKAVAALF 269 (438)
T ss_dssp HHHHHHHCCCGGGEEECCCCCCTTTSC---C---C----CHHHHHHTTCCSS-SEEEEEESCBSGGGCHHHHHHHHHHHH
T ss_pred HHHHHHhCCChhheEEecCCccccccC---C---cccchhhhhHHhcCCCCC-CcEEEEEeeecccCCHHHHHHHHHHHH
Confidence 4331112 1 2344444333221111 0 00111 2222222222 356666787632 12233333333332
Q ss_pred -hCC-CCEE-EEEcCCCCCCcccCCchhHHH---H--hCCCceEEcccChH---HHhcCCCCCceeec----cCchhHHH
Q 012212 301 -SLQ-KPFL-WVIRQDFMNGSRAKFPDGFIE---R--VSNRGKIVEWAPQE---KVLGHSSVACFISH----CGWNSTME 365 (468)
Q Consensus 301 -~~~-~~~l-~~~~~~~~~~~~~~~~~~~~~---~--~~~nv~~~~~~p~~---~ll~~~~~~~~I~h----GG~~s~~e 365 (468)
+.+ .++. +.++.. .. .....+.+.+ + ..++|++.+|+|+. .++..+++ +|.- |...++.|
T Consensus 270 ~~~p~~~~~l~i~G~~-~~--~g~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~E 344 (438)
T 3c48_A 270 DRDPDRNLRVIICGGP-SG--PNATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADI--VAVPSFNESFGLVAME 344 (438)
T ss_dssp HHCTTCSEEEEEECCB-C--------CHHHHHHHHTTCTTTEEEECCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHH
T ss_pred hhCCCcceEEEEEeCC-CC--CCcHHHHHHHHHHHcCCCCcEEEcCCCChHHHHHHHHhCCE--EEECccccCCchHHHH
Confidence 221 2333 333331 00 0011222222 2 25789999999874 46766665 7754 33568999
Q ss_pred hhhcCCceeccccccchhhhHHHHHHHhhceeEeeccCCCccCHHHHHHHHHHHhcChHHHH
Q 012212 366 GLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGIITRQEIQRKVLTLLKNDDIRS 427 (468)
Q Consensus 366 al~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~~~~r~ 427 (468)
|+++|+|+|+.+ .......+++. +.|+.++. -+.++++++|.++++|++.++
T Consensus 345 ama~G~PvI~~~----~~~~~e~i~~~-~~g~~~~~-----~d~~~la~~i~~l~~~~~~~~ 396 (438)
T 3c48_A 345 AQASGTPVIAAR----VGGLPIAVAEG-ETGLLVDG-----HSPHAWADALATLLDDDETRI 396 (438)
T ss_dssp HHHTTCCEEEES----CTTHHHHSCBT-TTEEEESS-----CCHHHHHHHHHHHHHCHHHHH
T ss_pred HHHcCCCEEecC----CCChhHHhhCC-CcEEECCC-----CCHHHHHHHHHHHHcCHHHHH
Confidence 999999999974 34555566553 67888865 468999999999999987543
|
| >1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3 | Back alignment and structure |
|---|
Probab=99.46 E-value=9.1e-13 Score=126.95 Aligned_cols=136 Identities=16% Similarity=0.191 Sum_probs=85.3
Q ss_pred ccEEEEEecccccCCHHHHHHHHHHHHhC-----CCCEEEEEcCCCCCCcccCCchhHHHHh--CCCceEEcccCh---H
Q 012212 274 RSVVYVAFGSVAVLSQQQFAELALGLESL-----QKPFLWVIRQDFMNGSRAKFPDGFIERV--SNRGKIVEWAPQ---E 343 (468)
Q Consensus 274 ~~vv~vs~Gs~~~~~~~~~~~~~~a~~~~-----~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~nv~~~~~~p~---~ 343 (468)
+++|+++.|...... -+..+++++..+ +.++++..+.+ ..+.+.+.+.. .++|++.+++++ .
T Consensus 198 ~~~vl~~~gr~~~~k--~~~~ll~a~~~l~~~~~~~~lv~~~g~~------~~~~~~l~~~~~~~~~v~~~g~~g~~~~~ 269 (376)
T 1v4v_A 198 GPYVTVTMHRRENWP--LLSDLAQALKRVAEAFPHLTFVYPVHLN------PVVREAVFPVLKGVRNFVLLDPLEYGSMA 269 (376)
T ss_dssp SCEEEECCCCGGGGG--GHHHHHHHHHHHHHHCTTSEEEEECCSC------HHHHHHHHHHHTTCTTEEEECCCCHHHHH
T ss_pred CCEEEEEeCcccchH--HHHHHHHHHHHHHhhCCCeEEEEECCCC------HHHHHHHHHHhccCCCEEEECCCCHHHHH
Confidence 456777777542221 244555655432 33444333322 01112222221 358888866665 4
Q ss_pred HHhcCCCCCceeeccCchhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeeccCCCccCHHHHHHHHHHHhcCh
Q 012212 344 KVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGIITRQEIQRKVLTLLKND 423 (468)
Q Consensus 344 ~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~~ 423 (468)
.+++.+++ ||+.+| |.+.||+++|+|+|+.+..+++... .+. |.|+.++ .+.++|.++|.++|+|+
T Consensus 270 ~~~~~ad~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~~----~~~-g~g~lv~------~d~~~la~~i~~ll~d~ 335 (376)
T 1v4v_A 270 ALMRASLL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPEG----LKA-GILKLAG------TDPEGVYRVVKGLLENP 335 (376)
T ss_dssp HHHHTEEE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHHH----HHH-TSEEECC------SCHHHHHHHHHHHHTCH
T ss_pred HHHHhCcE--EEECCc-CHHHHHHHcCCCEEeccCCCcchhh----hcC-CceEECC------CCHHHHHHHHHHHHhCh
Confidence 68866655 999883 4466999999999998766666552 354 8888774 36899999999999998
Q ss_pred HHHHHHHH
Q 012212 424 DIRSNSLK 431 (468)
Q Consensus 424 ~~r~~a~~ 431 (468)
+.+++..+
T Consensus 336 ~~~~~~~~ 343 (376)
T 1v4v_A 336 EELSRMRK 343 (376)
T ss_dssp HHHHHHHH
T ss_pred Hhhhhhcc
Confidence 76655443
|
| >3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* | Back alignment and structure |
|---|
Probab=99.46 E-value=6.8e-11 Score=116.07 Aligned_cols=399 Identities=12% Similarity=-0.021 Sum_probs=194.5
Q ss_pred CCCEEEEEcCC-----CccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHH------hh----hhhccCCCCCeEEEEc
Q 012212 3 RQPHVLVIPYP-----AQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIA------SL----QEKAEDSSSQIKLVTI 67 (468)
Q Consensus 3 ~~~~Il~~~~~-----~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~------~~----~~~~~~~~~~i~~~~~ 67 (468)
|+|||++++.. ..|--.-+..||++|+++||+|+++++......-.. .+ .........++.+..+
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~ 80 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRI 80 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEEE
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEEEe
Confidence 57899998732 346666789999999999999999996532211000 00 0000001256777766
Q ss_pred CCCCCCCcCCCCCHHHH-HHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCcc--cHHHHHHHhCCceEEEcccchH
Q 012212 68 PDGLELQAADREDPLKL-GESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVG--SALEVAESMGIARAAVVPFGPG 144 (468)
Q Consensus 68 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~--~~~~~A~~lgiP~v~~~~~~~~ 144 (468)
+...............- ...+.. ....+..+++.+.... .+||+|.+..... .+..+++..++|+|........
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~Dii~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~ 157 (439)
T 3fro_A 81 GGGLLDSEDVYGPGWDGLIRKAVT-FGRASVLLLNDLLREE--PLPDVVHFHDWHTVFAGALIKKYFKIPAVFTIHRLNK 157 (439)
T ss_dssp ESGGGGCSSTTCSHHHHHHHHHHH-HHHHHHHHHHHHTTTS--CCCSEEEEESGGGHHHHHHHHHHHCCCEEEEESCCCC
T ss_pred cchhccccccccCCcchhhhhhHH-HHHHHHHHHHHHhccC--CCCeEEEecchhhhhhHHHHhhccCCCEEEEeccccc
Confidence 65111111011111111 222221 2222334444442111 6799999986544 3456678889999886643320
Q ss_pred HHHHHhhhhhHhhcCCCCCCCcccccCCcccccCCCccCcccccCcCCCCCChhHHHHHHHHHHHHHhhccccEEEEcCc
Q 012212 145 SLALSLQFPKLLEAGIIDPNGFAILNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSV 224 (468)
Q Consensus 145 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 224 (468)
. .++ .. ......+.. .. +..... .. ...+..+|.++..+.
T Consensus 158 ~-------------------~~~-~~---~~~~~~~~~-----~~--~~~~~~----~~------~~~~~~ad~ii~~S~ 197 (439)
T 3fro_A 158 S-------------------KLP-AF---YFHEAGLSE-----LA--PYPDID----PE------HTGGYIADIVTTVSR 197 (439)
T ss_dssp C-------------------CEE-HH---HHHHTTCGG-----GC--CSSEEC----HH------HHHHHHCSEEEESCH
T ss_pred c-------------------cCc-hH---HhCcccccc-----cc--ccceee----Hh------hhhhhhccEEEecCH
Confidence 0 000 00 000000000 00 000000 00 111346788888776
Q ss_pred ccCChhhh--c-cCCCceeeccccCCCC-CCCCCC-CCCCCCCchhhhhhcccCccEEEEEecccc-c-CCHHHHHHHHH
Q 012212 225 YELDSPAC--D-LIPNILPIGPLLASNH-SGDLDG-NFWSEDSSCLSWLDEQAIRSVVYVAFGSVA-V-LSQQQFAELAL 297 (468)
Q Consensus 225 ~~le~~~~--~-~~p~v~~vGpl~~~~~-~~~~~~-~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~-~-~~~~~~~~~~~ 297 (468)
...+.... + ...++..+..-+.... .+.... ........+.+.+.. +++ .+++..|+.. . -..+.+...+.
T Consensus 198 ~~~~~~~~~~~~~~~~i~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~i~~~G~~~~~~Kg~~~li~a~~ 275 (439)
T 3fro_A 198 GYLIDEWGFFRNFEGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFGM-DEG-VTFMFIGRFDRGQKGVDVLLKAIE 275 (439)
T ss_dssp HHHHHTHHHHGGGTTSEEECCCCCCTTTSCGGGSCSCHHHHHHHHHHHHTC-CSC-EEEEEECCSSCTTBCHHHHHHHHH
T ss_pred HHHHHHhhhhhhcCCceeecCCCCCchhcCcccccchhhhhHHHHHHHcCC-CCC-cEEEEEcccccccccHHHHHHHHH
Confidence 54433111 1 1234444433222111 000000 000000111111221 223 5666678764 2 23344444444
Q ss_pred HHHhCC--CCEEEEEcCCCCCCcccCCchhH---HHHhCCCceEEcccChHH---HhcCCCCCceeec----cCchhHHH
Q 012212 298 GLESLQ--KPFLWVIRQDFMNGSRAKFPDGF---IERVSNRGKIVEWAPQEK---VLGHSSVACFISH----CGWNSTME 365 (468)
Q Consensus 298 a~~~~~--~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~nv~~~~~~p~~~---ll~~~~~~~~I~h----GG~~s~~e 365 (468)
.+.+.. ..+-+.+-+.. . ....+.+ .++.++++.+.+|+|+.+ ++..+++ +|.- |-..++.|
T Consensus 276 ~l~~~~~~~~~~l~i~G~g---~-~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~E 349 (439)
T 3fro_A 276 ILSSKKEFQEMRFIIIGKG---D-PELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALE 349 (439)
T ss_dssp HHHTSGGGGGEEEEEECCC---C-HHHHHHHHHHHHHCTTEEEECSCCCHHHHHHHHTTCSE--EEECBSCCSSCHHHHH
T ss_pred HHHhcccCCCeEEEEEcCC---C-hhHHHHHHHHHhhcCCEEEEcCCCCHHHHHHHHHHCCE--EEeCCCCCCccHHHHH
Confidence 444322 23333333320 0 0000111 222343444559999865 5655555 7732 33479999
Q ss_pred hhhcCCceeccccccchhhhHHHHHHHhhceeEeeccCCCccCHHHHHHHHHHHhc-ChHHHHHHHHHHHHHHHHhcCCC
Q 012212 366 GLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGIITRQEIQRKVLTLLK-NDDIRSNSLKLKEVARKSLLGGG 444 (468)
Q Consensus 366 al~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~-~~~~r~~a~~l~~~~~~~~~~~g 444 (468)
|+++|+|+|+.. .......++. |.|..++. -+.++++++|.++++ |++.+++..+-+.+..+ .=
T Consensus 350 Ama~G~Pvi~s~----~~~~~e~~~~--~~g~~~~~-----~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~----~~ 414 (439)
T 3fro_A 350 AMCLGAIPIASA----VGGLRDIITN--ETGILVKA-----GDPGELANAILKALELSRSDLSKFRENCKKRAM----SF 414 (439)
T ss_dssp HHHTTCEEEEES----STHHHHHCCT--TTCEEECT-----TCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHH----TS
T ss_pred HHHCCCCeEEcC----CCCcceeEEc--CceEEeCC-----CCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHh----hC
Confidence 999999999874 4445554443 78888876 469999999999998 77755544433333322 33
Q ss_pred chHHHHHHHHHHHHhhcccCCCC
Q 012212 445 SSFRNFESFISDIKMLISGCDST 467 (468)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~~ 467 (468)
+....++++++.+++....+.++
T Consensus 415 s~~~~~~~~~~~~~~~~~~~~~~ 437 (439)
T 3fro_A 415 SWEKSAERYVKAYTGSIDRAFDF 437 (439)
T ss_dssp CHHHHHHHHHHHHHTCSCCBCSS
T ss_pred cHHHHHHHHHHHHHHHHHhhhhh
Confidence 55777788888888777666554
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=3.5e-11 Score=120.48 Aligned_cols=357 Identities=13% Similarity=0.099 Sum_probs=179.1
Q ss_pred CCCCCEEEEEcCC---------------CccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccC--CCCCeE
Q 012212 1 MSRQPHVLVIPYP---------------AQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAED--SSSQIK 63 (468)
Q Consensus 1 m~~~~~Il~~~~~---------------~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~--~~~~i~ 63 (468)
|+++|||++++.. ..|.-.....||++|.++||+|++++.............. ... ...++.
T Consensus 4 m~~~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~-~~~~~~~~gv~ 82 (499)
T 2r60_A 4 MTRIKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIKDENWPEFSGE-IDYYQETNKVR 82 (499)
T ss_dssp ---CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECCCBTTBGGGCCS-EEECTTCSSEE
T ss_pred ccccceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEEeCCCCcccccchhhh-HHhccCCCCeE
Confidence 4567999998752 3577788999999999999999999975432110000000 000 025788
Q ss_pred EEEcCCCCCCCcCCCCCHHHHHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCcc--cHHHHHHHhCCceEEEccc
Q 012212 64 LVTIPDGLELQAADREDPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVG--SALEVAESMGIARAAVVPF 141 (468)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~--~~~~~A~~lgiP~v~~~~~ 141 (468)
++.++....... ........+..+ ...+.+.+++.. .+||+|.+..... .+..++..+|+|+|+....
T Consensus 83 v~~~~~~~~~~~-~~~~~~~~~~~~-------~~~l~~~l~~~~--~~~Divh~~~~~~~~~~~~~~~~~~~p~v~~~H~ 152 (499)
T 2r60_A 83 IVRIPFGGDKFL-PKEELWPYLHEY-------VNKIINFYREEG--KFPQVVTTHYGDGGLAGVLLKNIKGLPFTFTGHS 152 (499)
T ss_dssp EEEECCSCSSCC-CGGGCGGGHHHH-------HHHHHHHHHHHT--CCCSEEEEEHHHHHHHHHHHHHHHCCCEEEECSS
T ss_pred EEEecCCCcCCc-CHHHHHHHHHHH-------HHHHHHHHHhcC--CCCCEEEEcCCcchHHHHHHHHhcCCcEEEEccC
Confidence 888774322110 011111111111 122222232211 3699999875332 3345678889999876554
Q ss_pred chHHHHHHhhhhhHhhcCCCCCCCcccccCCcccccCCCccCcccccCcCCCCCChhHHHHH---HHHHHHHHhhccccE
Q 012212 142 GPGSLALSLQFPKLLEAGIIDPNGFAILNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILL---GIICAVIQAVKISNW 218 (468)
Q Consensus 142 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 218 (468)
...... . .... . . ...+ .....+ ....-....+..+|.
T Consensus 153 ~~~~~~-~---------~~~~-~--------------------------~-~~~~-~~~~~~~~~~~~~~~~~~~~~ad~ 193 (499)
T 2r60_A 153 LGAQKM-E---------KLNV-N--------------------------T-SNFK-EMDERFKFHRRIIAERLTMSYADK 193 (499)
T ss_dssp CHHHHH-H---------TTCC-C--------------------------S-TTSH-HHHHHHCHHHHHHHHHHHHHHCSE
T ss_pred cccccc-h---------hhcc-C--------------------------C-CCcc-hhhhhHHHHHHHHHHHHHHhcCCE
Confidence 322110 0 0000 0 0 0000 000000 000001123457889
Q ss_pred EEEcCcccCChhhhc--c-------C-CCceeeccccCCCCCCCCCCCCCCCC-----Cchhhhhh-----cccCccEEE
Q 012212 219 IINNSVYELDSPACD--L-------I-PNILPIGPLLASNHSGDLDGNFWSED-----SSCLSWLD-----EQAIRSVVY 278 (468)
Q Consensus 219 ~l~~~~~~le~~~~~--~-------~-p~v~~vGpl~~~~~~~~~~~~~~~~~-----~~l~~~l~-----~~~~~~vv~ 278 (468)
++..+...-+.-... + . .++..+..-+...... ..+ ..+.+-+. ...++ .++
T Consensus 194 vi~~S~~~~~~~~~~~~~g~~~~~~~~~ki~vi~ngvd~~~~~-------~~~~~~~~~~~r~~~~~~~~~~~~~~-~~i 265 (499)
T 2r60_A 194 IIVSTSQERFGQYSHDLYRGAVNVEDDDKFSVIPPGVNTRVFD-------GEYGDKIKAKITKYLERDLGSERMEL-PAI 265 (499)
T ss_dssp EEESSHHHHHHTTTSGGGTTTCCTTCGGGEEECCCCBCTTTSS-------SCCCHHHHHHHHHHHHHHSCGGGTTS-CEE
T ss_pred EEECCHHHHHHHHhhhcccccccccCCCCeEEECCCcChhhcC-------ccchhhhHHHHHHHhcccccccCCCC-cEE
Confidence 988887543321111 1 1 2343333222211100 011 11222222 11222 456
Q ss_pred EEecccccCCHHHHHHHHHHHHhCCC----C-EEEEEcCCCCCCcc-cCC-------chhHHHH-----hCCCceEEccc
Q 012212 279 VAFGSVAVLSQQQFAELALGLESLQK----P-FLWVIRQDFMNGSR-AKF-------PDGFIER-----VSNRGKIVEWA 340 (468)
Q Consensus 279 vs~Gs~~~~~~~~~~~~~~a~~~~~~----~-~l~~~~~~~~~~~~-~~~-------~~~~~~~-----~~~nv~~~~~~ 340 (468)
+..|+.. ...-+..+++++..+.. . .+++++...+.... ..+ .+.+.+. ..++|++.+++
T Consensus 266 ~~vGrl~--~~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~~V~~~G~v 343 (499)
T 2r60_A 266 IASSRLD--QKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSMFPLN 343 (499)
T ss_dssp EECSCCC--GGGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTBCTTSCHHHHHHHHHHHHHHHHTTCBTTEEEEECC
T ss_pred EEeecCc--cccCHHHHHHHHHHHHHhCCCceEEEEECCCCCcccccccccccchHHHHHHHHHHHhcCCCceEEECCCC
Confidence 6678763 23345666777765531 2 34555542000000 001 1222221 25789999999
Q ss_pred ChHH---HhcCC----CCCceeec----cCchhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeeccCCCccCH
Q 012212 341 PQEK---VLGHS----SVACFISH----CGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGIITR 409 (468)
Q Consensus 341 p~~~---ll~~~----~~~~~I~h----GG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~~~~~~t~ 409 (468)
|+.+ ++..+ ++ +|.- |-..++.||+++|+|+|+.. .......+... +.|+.++. -+.
T Consensus 344 ~~~~~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~----~~g~~e~v~~~-~~g~l~~~-----~d~ 411 (499)
T 2r60_A 344 SQQELAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTR----NGGPAEILDGG-KYGVLVDP-----EDP 411 (499)
T ss_dssp SHHHHHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEES----SBHHHHHTGGG-TSSEEECT-----TCH
T ss_pred CHHHHHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEec----CCCHHHHhcCC-ceEEEeCC-----CCH
Confidence 8754 56555 55 7732 33468999999999999884 34555556553 57888876 468
Q ss_pred HHHHHHHHHHhcChHHHHHH
Q 012212 410 QEIQRKVLTLLKNDDIRSNS 429 (468)
Q Consensus 410 ~~l~~ai~~~l~~~~~r~~a 429 (468)
++++++|.++++|++.+++.
T Consensus 412 ~~la~~i~~ll~~~~~~~~~ 431 (499)
T 2r60_A 412 EDIARGLLKAFESEETWSAY 431 (499)
T ss_dssp HHHHHHHHHHHSCHHHHHHH
T ss_pred HHHHHHHHHHHhCHHHHHHH
Confidence 99999999999998755443
|
| >3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.41 E-value=2e-12 Score=125.19 Aligned_cols=86 Identities=20% Similarity=0.222 Sum_probs=64.6
Q ss_pred CCCceEEcccCh---HHHhcCCCCCceeeccCchhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeeccCCCcc
Q 012212 331 SNRGKIVEWAPQ---EKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGII 407 (468)
Q Consensus 331 ~~nv~~~~~~p~---~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~~~~~~ 407 (468)
.+++++.+++++ ..+++.+++ +|+..|..+ .||.++|+|+|+++-..+++.. .++ |.|+.++ .
T Consensus 281 ~~~v~l~~~l~~~~~~~l~~~ad~--vv~~SGg~~-~EA~a~g~PvV~~~~~~~~~e~----v~~-g~~~lv~------~ 346 (403)
T 3ot5_A 281 HERIHLIEPLDAIDFHNFLRKSYL--VFTDSGGVQ-EEAPGMGVPVLVLRDTTERPEG----IEA-GTLKLIG------T 346 (403)
T ss_dssp CTTEEEECCCCHHHHHHHHHHEEE--EEECCHHHH-HHGGGTTCCEEECCSSCSCHHH----HHH-TSEEECC------S
T ss_pred CCCEEEeCCCCHHHHHHHHHhcCE--EEECCccHH-HHHHHhCCCEEEecCCCcchhh----eeC-CcEEEcC------C
Confidence 368999999874 457766655 998864322 6999999999999766665542 354 8887764 3
Q ss_pred CHHHHHHHHHHHhcChHHHHHHH
Q 012212 408 TRQEIQRKVLTLLKNDDIRSNSL 430 (468)
Q Consensus 408 t~~~l~~ai~~~l~~~~~r~~a~ 430 (468)
+.++|.++|.++|+|++.+++..
T Consensus 347 d~~~l~~ai~~ll~~~~~~~~m~ 369 (403)
T 3ot5_A 347 NKENLIKEALDLLDNKESHDKMA 369 (403)
T ss_dssp CHHHHHHHHHHHHHCHHHHHHHH
T ss_pred CHHHHHHHHHHHHcCHHHHHHHH
Confidence 68999999999999988766544
|
| >3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.39 E-value=4.4e-12 Score=122.62 Aligned_cols=138 Identities=12% Similarity=0.115 Sum_probs=84.9
Q ss_pred CccEEEEEecccccCCHHHHHHHHHHHHhC-----CCCEEEEEcCCCCCCcccCCchhHHHH--hCCCceEEcccCh---
Q 012212 273 IRSVVYVAFGSVAVLSQQQFAELALGLESL-----QKPFLWVIRQDFMNGSRAKFPDGFIER--VSNRGKIVEWAPQ--- 342 (468)
Q Consensus 273 ~~~vv~vs~Gs~~~~~~~~~~~~~~a~~~~-----~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~nv~~~~~~p~--- 342 (468)
++++|+++.+....... .+..+++++..+ +.++++.++.. ....+.+.+. ..+++++.+++++
T Consensus 229 ~~~~vlv~~hR~~~~~~-~~~~ll~A~~~l~~~~~~~~~v~~~g~~------~~~~~~l~~~~~~~~~v~~~~~lg~~~~ 301 (396)
T 3dzc_A 229 SKKLILVTGHRRESFGG-GFERICQALITTAEQHPECQILYPVHLN------PNVREPVNKLLKGVSNIVLIEPQQYLPF 301 (396)
T ss_dssp TSEEEEEECSCBCCCTT-HHHHHHHHHHHHHHHCTTEEEEEECCBC------HHHHHHHHHHTTTCTTEEEECCCCHHHH
T ss_pred CCCEEEEEECCcccchh-HHHHHHHHHHHHHHhCCCceEEEEeCCC------hHHHHHHHHHHcCCCCEEEeCCCCHHHH
Confidence 34577776533222222 256677766543 33444433321 0111222221 1468889888764
Q ss_pred HHHhcCCCCCceeeccCchhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeeccCCCccCHHHHHHHHHHHhcC
Q 012212 343 EKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGIITRQEIQRKVLTLLKN 422 (468)
Q Consensus 343 ~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~ 422 (468)
..+++.+++ +|+-.| |.+.||.++|+|+|++.-..+++. +.+. |.++.++ .+.++|.++|.++|+|
T Consensus 302 ~~l~~~ad~--vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~e----~v~~-G~~~lv~------~d~~~l~~ai~~ll~d 367 (396)
T 3dzc_A 302 VYLMDRAHI--ILTDSG-GIQEEAPSLGKPVLVMRETTERPE----AVAA-GTVKLVG------TNQQQICDALSLLLTD 367 (396)
T ss_dssp HHHHHHCSE--EEESCS-GGGTTGGGGTCCEEECCSSCSCHH----HHHH-TSEEECT------TCHHHHHHHHHHHHHC
T ss_pred HHHHHhcCE--EEECCc-cHHHHHHHcCCCEEEccCCCcchH----HHHc-CceEEcC------CCHHHHHHHHHHHHcC
Confidence 457766665 999987 656799999999999855555432 3454 8876553 3589999999999999
Q ss_pred hHHHHHHHH
Q 012212 423 DDIRSNSLK 431 (468)
Q Consensus 423 ~~~r~~a~~ 431 (468)
++.+++..+
T Consensus 368 ~~~~~~m~~ 376 (396)
T 3dzc_A 368 PQAYQAMSQ 376 (396)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHhh
Confidence 887665443
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=1.3e-10 Score=112.91 Aligned_cols=115 Identities=7% Similarity=0.089 Sum_probs=78.7
Q ss_pred CCCceEEcccChH---HHhcCCCCCceeec----cCc-hhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeecc
Q 012212 331 SNRGKIVEWAPQE---KVLGHSSVACFISH----CGW-NSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFAD 402 (468)
Q Consensus 331 ~~nv~~~~~~p~~---~ll~~~~~~~~I~h----GG~-~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~ 402 (468)
.+||++.+++|+. .++..+++ +|.- .|. +++.||+++|+|+|+.+. ......+.+. +.|+.++.
T Consensus 262 ~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~i~~~-~~g~~~~~- 333 (406)
T 2gek_A 262 AGHLRFLGQVDDATKASAMRSADV--YCAPHLGGESFGIVLVEAMAAGTAVVASDL----DAFRRVLADG-DAGRLVPV- 333 (406)
T ss_dssp GGGEEECCSCCHHHHHHHHHHSSE--EEECCCSCCSSCHHHHHHHHHTCEEEECCC----HHHHHHHTTT-TSSEECCT-
T ss_pred cCcEEEEecCCHHHHHHHHHHCCE--EEecCCCCCCCchHHHHHHHcCCCEEEecC----CcHHHHhcCC-CceEEeCC-
Confidence 5788999999985 57766666 7643 344 589999999999999854 5566666663 67888765
Q ss_pred CCCccCHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhhc
Q 012212 403 ENGIITRQEIQRKVLTLLKNDDIRSNSLKLKEVARKSLLGGGSSFRNFESFISDIKMLI 461 (468)
Q Consensus 403 ~~~~~t~~~l~~ai~~~l~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 461 (468)
-+.+++.++|.++++|++.+++..+-+ ++... .=+.....+++.+.+++..
T Consensus 334 ----~d~~~l~~~i~~l~~~~~~~~~~~~~~---~~~~~-~~s~~~~~~~~~~~~~~~~ 384 (406)
T 2gek_A 334 ----DDADGMAAALIGILEDDQLRAGYVARA---SERVH-RYDWSVVSAQIMRVYETVS 384 (406)
T ss_dssp ----TCHHHHHHHHHHHHHCHHHHHHHHHHH---HHHGG-GGBHHHHHHHHHHHHHHHC
T ss_pred ----CCHHHHHHHHHHHHcCHHHHHHHHHHH---HHHHH-hCCHHHHHHHHHHHHHHHH
Confidence 368999999999999988555433322 22222 2244555555655555544
|
| >1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* | Back alignment and structure |
|---|
Probab=99.36 E-value=9e-12 Score=120.26 Aligned_cols=136 Identities=13% Similarity=0.174 Sum_probs=84.8
Q ss_pred CccEEEEEecccccCCHHHHHHHHHHHHhC-----CCCEEEEEcCCCCCCcccCCchhHHHHh--CCCceEEcccCh---
Q 012212 273 IRSVVYVAFGSVAVLSQQQFAELALGLESL-----QKPFLWVIRQDFMNGSRAKFPDGFIERV--SNRGKIVEWAPQ--- 342 (468)
Q Consensus 273 ~~~vv~vs~Gs~~~~~~~~~~~~~~a~~~~-----~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~nv~~~~~~p~--- 342 (468)
++++++++.|+..... +-+..+++++..+ +.++++..+.. ....+.+.+.. .++|++.+++++
T Consensus 204 ~~~~vl~~~gr~~~~~-kg~~~li~a~~~l~~~~~~~~l~i~~g~~------~~~~~~l~~~~~~~~~v~~~g~~~~~~~ 276 (384)
T 1vgv_A 204 DKKMILVTGHRRESFG-RGFEEICHALADIATTHQDIQIVYPVHLN------PNVREPVNRILGHVKNVILIDPQEYLPF 276 (384)
T ss_dssp TSEEEEEECCCBSSCC-HHHHHHHHHHHHHHHHCTTEEEEEECCBC------HHHHHHHHHHHTTCTTEEEECCCCHHHH
T ss_pred CCCEEEEEeCCccccc-hHHHHHHHHHHHHHhhCCCeEEEEEcCCC------HHHHHHHHHHhhcCCCEEEeCCCCHHHH
Confidence 3457888888754322 2344555555432 23343322211 01112222221 368898777775
Q ss_pred HHHhcCCCCCceeeccCchhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeeccCCCccCHHHHHHHHHHHhcC
Q 012212 343 EKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGIITRQEIQRKVLTLLKN 422 (468)
Q Consensus 343 ~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~ 422 (468)
..++..+++ ||+.+| +.+.||+++|+|+|+.+..++... +.+. |.|+.++. +.++|.++|.++++|
T Consensus 277 ~~~~~~ad~--~v~~Sg-~~~lEA~a~G~PvI~~~~~~~~~e----~v~~-g~g~lv~~------d~~~la~~i~~ll~d 342 (384)
T 1vgv_A 277 VWLMNHAWL--ILTDSG-GIQEEAPSLGKPVLVMRDTTERPE----AVTA-GTVRLVGT------DKQRIVEEVTRLLKD 342 (384)
T ss_dssp HHHHHHCSE--EEESSS-TGGGTGGGGTCCEEEESSCCSCHH----HHHH-TSEEEECS------SHHHHHHHHHHHHHC
T ss_pred HHHHHhCcE--EEECCc-chHHHHHHcCCCEEEccCCCCcch----hhhC-CceEEeCC------CHHHHHHHHHHHHhC
Confidence 456766665 999885 348899999999999986444332 3454 88888753 589999999999999
Q ss_pred hHHHHHH
Q 012212 423 DDIRSNS 429 (468)
Q Consensus 423 ~~~r~~a 429 (468)
++.+++.
T Consensus 343 ~~~~~~~ 349 (384)
T 1vgv_A 343 ENEYQAM 349 (384)
T ss_dssp HHHHHHH
T ss_pred hHHHhhh
Confidence 8765543
|
| >3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A | Back alignment and structure |
|---|
Probab=99.36 E-value=3.1e-11 Score=116.00 Aligned_cols=138 Identities=14% Similarity=0.106 Sum_probs=83.3
Q ss_pred CccEEEEEecccccCCHHHHHHHHHHHHhC---CCCEEEEEcCCCCCCcccCCchhHHHHhC--CCceEEcccChH---H
Q 012212 273 IRSVVYVAFGSVAVLSQQQFAELALGLESL---QKPFLWVIRQDFMNGSRAKFPDGFIERVS--NRGKIVEWAPQE---K 344 (468)
Q Consensus 273 ~~~vv~vs~Gs~~~~~~~~~~~~~~a~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~nv~~~~~~p~~---~ 344 (468)
++++++++.|...... .-+..+++++..+ ..++.++++.+ ....+.+.+.+... ++|++.+++++. .
T Consensus 204 ~~~~vl~~~gr~~~~~-K~~~~li~a~~~l~~~~~~~~~i~~~g----~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~ 278 (375)
T 3beo_A 204 NNRLVLMTAHRRENLG-EPMRNMFRAIKRLVDKHEDVQVVYPVH----MNPVVRETANDILGDYGRIHLIEPLDVIDFHN 278 (375)
T ss_dssp TSEEEEEECCCGGGTT-HHHHHHHHHHHHHHHHCTTEEEEEECC----SCHHHHHHHHHHHTTCTTEEEECCCCHHHHHH
T ss_pred CCCeEEEEecccccch-hHHHHHHHHHHHHHhhCCCeEEEEeCC----CCHHHHHHHHHHhhccCCEEEeCCCCHHHHHH
Confidence 3456777777653221 3345666666432 11333334332 00111112222223 689998888764 4
Q ss_pred HhcCCCCCceeeccCchhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeeccCCCccCHHHHHHHHHHHhcChH
Q 012212 345 VLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGIITRQEIQRKVLTLLKNDD 424 (468)
Q Consensus 345 ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~~~ 424 (468)
++..+++ +|+..| +.+.||+++|+|+|+....+.. .. +.+. |.|+.++. +.+++.++|.++++|++
T Consensus 279 ~~~~ad~--~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~---~e-~v~~-g~g~~v~~------d~~~la~~i~~ll~~~~ 344 (375)
T 3beo_A 279 VAARSYL--MLTDSG-GVQEEAPSLGVPVLVLRDTTER---PE-GIEA-GTLKLAGT------DEETIFSLADELLSDKE 344 (375)
T ss_dssp HHHTCSE--EEECCH-HHHHHHHHHTCCEEECSSCCSC---HH-HHHT-TSEEECCS------CHHHHHHHHHHHHHCHH
T ss_pred HHHhCcE--EEECCC-ChHHHHHhcCCCEEEecCCCCC---ce-eecC-CceEEcCC------CHHHHHHHHHHHHhChH
Confidence 6755555 998873 5588999999999988543332 22 3454 88887752 58999999999999987
Q ss_pred HHHHH
Q 012212 425 IRSNS 429 (468)
Q Consensus 425 ~r~~a 429 (468)
.+++.
T Consensus 345 ~~~~~ 349 (375)
T 3beo_A 345 AHDKM 349 (375)
T ss_dssp HHHHH
T ss_pred hHhhh
Confidence 66543
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* | Back alignment and structure |
|---|
Probab=99.32 E-value=2.3e-11 Score=115.42 Aligned_cols=152 Identities=12% Similarity=0.065 Sum_probs=93.0
Q ss_pred EEEecccccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCcccCCchhHHHHhCCCceEEcccChH---HHhcCCCCCce
Q 012212 278 YVAFGSVAVLSQQQFAELALGLESLQKPFLWVIRQDFMNGSRAKFPDGFIERVSNRGKIVEWAPQE---KVLGHSSVACF 354 (468)
Q Consensus 278 ~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~---~ll~~~~~~~~ 354 (468)
++..|+.. +..-+..+++++..++.+++++-.+. ....+ ..+.++..+||++.+|+|+. .++..+++ +
T Consensus 165 i~~vG~~~--~~Kg~~~li~a~~~~~~~l~i~G~g~----~~~~l-~~~~~~~~~~v~~~g~~~~~~l~~~~~~adv--~ 235 (342)
T 2iuy_A 165 LLFMGRVS--PHKGALEAAAFAHACGRRLVLAGPAW----EPEYF-DEITRRYGSTVEPIGEVGGERRLDLLASAHA--V 235 (342)
T ss_dssp EEEESCCC--GGGTHHHHHHHHHHHTCCEEEESCCC----CHHHH-HHHHHHHTTTEEECCCCCHHHHHHHHHHCSE--E
T ss_pred EEEEeccc--cccCHHHHHHHHHhcCcEEEEEeCcc----cHHHH-HHHHHHhCCCEEEeccCCHHHHHHHHHhCCE--E
Confidence 44457753 33445667777776666665543322 11111 11223335899999999986 57766666 6
Q ss_pred ee-------------ccC-chhHHHhhhcCCceeccccccchhhhHHHHHH--HhhceeEeeccCCCccCHHHHHHHHHH
Q 012212 355 IS-------------HCG-WNSTMEGLSMGVPFLCWPYFSDQYQNRNYICE--AWKIGLQFFADENGIITRQEIQRKVLT 418 (468)
Q Consensus 355 I~-------------hGG-~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~--~lG~g~~l~~~~~~~~t~~~l~~ai~~ 418 (468)
|. +-| ..++.||+++|+|+|+... ..+...+++ . +.|+.++. +.+++.++|.+
T Consensus 236 v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~----~~~~e~~~~~~~-~~g~~~~~------d~~~l~~~i~~ 304 (342)
T 2iuy_A 236 LAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGN----GCLAEIVPSVGE-VVGYGTDF------APDEARRTLAG 304 (342)
T ss_dssp EECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCT----TTHHHHGGGGEE-ECCSSSCC------CHHHHHHHHHT
T ss_pred EECCcccccccccccccCccHHHHHHHhcCCCEEEcCC----CChHHHhcccCC-CceEEcCC------CHHHHHHHHHH
Confidence 63 233 4789999999999999854 445665555 3 46665543 58999999999
Q ss_pred HhcChHHHHHHHHHH-HHHHHHhcCCCchHHHHHHHHHHHHhhc
Q 012212 419 LLKNDDIRSNSLKLK-EVARKSLLGGGSSFRNFESFISDIKMLI 461 (468)
Q Consensus 419 ~l~~~~~r~~a~~l~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 461 (468)
+++ .+++++.. +.+ +....++++++.+++..
T Consensus 305 l~~----~~~~~~~~~~~~--------s~~~~~~~~~~~~~~~~ 336 (342)
T 2iuy_A 305 LPA----SDEVRRAAVRLW--------GHVTIAERYVEQYRRLL 336 (342)
T ss_dssp SCC----HHHHHHHHHHHH--------BHHHHHHHHHHHHHHHH
T ss_pred HHH----HHHHHHHHHHhc--------CHHHHHHHHHHHHHHHH
Confidence 997 55555443 333 33445555555555444
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=1.3e-09 Score=105.45 Aligned_cols=351 Identities=9% Similarity=0.056 Sum_probs=176.0
Q ss_pred CEEEEEcCCCc-cChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCCCCCCCcCCCCCHHH
Q 012212 5 PHVLVIPYPAQ-GHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDGLELQAADREDPLK 83 (468)
Q Consensus 5 ~~Il~~~~~~~-GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 83 (468)
.++....+|.. |.-.....||++|.++||+|++++...... .. ....++.+..++....... ......
T Consensus 16 ~~~~~~~~p~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~-~~--------~~~~~i~~~~~~~~~~~~~--~~~~~~ 84 (394)
T 2jjm_A 16 LKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGLPFR-LN--------KVYPNIYFHEVTVNQYSVF--QYPPYD 84 (394)
T ss_dssp CEEEEECCC--CHHHHHHHHHHHHHHHTTCEEEEECSSCC-------------CCCTTEEEECCCCC----C--CSCCHH
T ss_pred eeeehhcCCCCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCc-cc--------ccCCceEEEeccccccccc--cccccc
Confidence 56776666644 777888999999999999999999864321 11 1125666665553211110 001111
Q ss_pred HHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCccc--HHHHHHH-h--CCceEEEcccchHHHHHHhhhhhHhhc
Q 012212 84 LGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVGS--ALEVAES-M--GIARAAVVPFGPGSLALSLQFPKLLEA 158 (468)
Q Consensus 84 ~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~~--~~~~A~~-l--giP~v~~~~~~~~~~~~~~~~p~~~~~ 158 (468)
+. ....+.++++. .+||+|++...... ...++.. + ++|+|......... ..
T Consensus 85 -~~-----~~~~l~~~l~~-------~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~----~~------- 140 (394)
T 2jjm_A 85 -LA-----LASKMAEVAQR-------ENLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDIT----VL------- 140 (394)
T ss_dssp -HH-----HHHHHHHHHHH-------HTCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHH----TT-------
T ss_pred -HH-----HHHHHHHHHHH-------cCCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCccc----cc-------
Confidence 11 11123344444 45999999754331 2334443 3 59988755432100 00
Q ss_pred CCCCCCCcccccCCcccccCCCccCcccccCcCCCCCChhHHHHHHHHHHHHHhhccccEEEEcCcccCChhhhcc--CC
Q 012212 159 GIIDPNGFAILNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACDL--IP 236 (468)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~~~~--~p 236 (468)
+. . . ....... ..+..+|.++..+....+.-.... ..
T Consensus 141 ~~--------------------~-------~--------~~~~~~~------~~~~~ad~ii~~s~~~~~~~~~~~~~~~ 179 (394)
T 2jjm_A 141 GS--------------------D-------P--------SLNNLIR------FGIEQSDVVTAVSHSLINETHELVKPNK 179 (394)
T ss_dssp TT--------------------C-------T--------TTHHHHH------HHHHHSSEEEESCHHHHHHHHHHTCCSS
T ss_pred CC--------------------C-------H--------HHHHHHH------HHHhhCCEEEECCHHHHHHHHHhhCCcc
Confidence 00 0 0 0001111 114467888888765544321111 23
Q ss_pred CceeeccccCCCCCCCCCCCCCCCCCchhhhhhcccCccEEEEEeccccc-CCHHHHHHHHHHHHh-CCCCEEEEEcCCC
Q 012212 237 NILPIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAV-LSQQQFAELALGLES-LQKPFLWVIRQDF 314 (468)
Q Consensus 237 ~v~~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~-~~~~~~~~~~~a~~~-~~~~~l~~~~~~~ 314 (468)
++..+.......... ......+.+.+...++ ..+++..|+... -..+.+...+..+.+ .+.++ +.++.+
T Consensus 180 ~~~vi~ngv~~~~~~------~~~~~~~~~~~~~~~~-~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~l-~i~G~g- 250 (394)
T 2jjm_A 180 DIQTVYNFIDERVYF------KRDMTQLKKEYGISES-EKILIHISNFRKVKRVQDVVQAFAKIVTEVDAKL-LLVGDG- 250 (394)
T ss_dssp CEEECCCCCCTTTCC------CCCCHHHHHHTTCC----CEEEEECCCCGGGTHHHHHHHHHHHHHSSCCEE-EEECCC-
T ss_pred cEEEecCCccHHhcC------CcchHHHHHHcCCCCC-CeEEEEeeccccccCHHHHHHHHHHHHhhCCCEE-EEECCc-
Confidence 555554333221111 0011111122221122 245556677632 122233333333332 23333 344433
Q ss_pred CCCcccCCchhHHHHh-----CCCceEEcccCh-HHHhcCCCCCcee----eccCchhHHHhhhcCCceeccccccchhh
Q 012212 315 MNGSRAKFPDGFIERV-----SNRGKIVEWAPQ-EKVLGHSSVACFI----SHCGWNSTMEGLSMGVPFLCWPYFSDQYQ 384 (468)
Q Consensus 315 ~~~~~~~~~~~~~~~~-----~~nv~~~~~~p~-~~ll~~~~~~~~I----~hGG~~s~~eal~~GvP~v~~P~~~DQ~~ 384 (468)
...+.+.+.. .++|.+.++..+ ..++..+++ +| .-|..+++.||+++|+|+|+.+.. .
T Consensus 251 ------~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~PvI~~~~~----~ 318 (394)
T 2jjm_A 251 ------PEFCTILQLVKNLHIEDRVLFLGKQDNVAELLAMSDL--MLLLSEKESFGLVLLEAMACGVPCIGTRVG----G 318 (394)
T ss_dssp ------TTHHHHHHHHHTTTCGGGBCCCBSCSCTHHHHHTCSE--EEECCSCCSCCHHHHHHHHTTCCEEEECCT----T
T ss_pred ------hHHHHHHHHHHHcCCCCeEEEeCchhhHHHHHHhCCE--EEeccccCCCchHHHHHHhcCCCEEEecCC----C
Confidence 1222222221 467888887654 568866655 88 556678999999999999998642 3
Q ss_pred hHHHHHHHhhceeEeeccCCCccCHHHHHHHHHHHhcChHHHHHHHHHHHHHH-HHhcCCCchHHHHHHHHHHHHhhcc
Q 012212 385 NRNYICEAWKIGLQFFADENGIITRQEIQRKVLTLLKNDDIRSNSLKLKEVAR-KSLLGGGSSFRNFESFISDIKMLIS 462 (468)
Q Consensus 385 na~rv~~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~~~~r~~a~~l~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~ 462 (468)
....+++. +.|+.++. -+.+++.++|.++++|++.+++..+-+.+.. + .=+....++++++.+++...
T Consensus 319 ~~e~v~~~-~~g~~~~~-----~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~----~~s~~~~~~~~~~~~~~~~~ 387 (394)
T 2jjm_A 319 IPEVIQHG-DTGYLCEV-----GDTTGVADQAIQLLKDEELHRNMGERARESVYE----QFRSEKIVSQYETIYYDVLR 387 (394)
T ss_dssp STTTCCBT-TTEEEECT-----TCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH----HSCHHHHHHHHHHHHHHTC-
T ss_pred hHHHhhcC-CceEEeCC-----CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH----hCCHHHHHHHHHHHHHHHHh
Confidence 33344443 57877765 3689999999999999885544333322221 2 22445566666666665543
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* | Back alignment and structure |
|---|
Probab=99.28 E-value=9.9e-10 Score=105.35 Aligned_cols=141 Identities=15% Similarity=0.242 Sum_probs=93.4
Q ss_pred cEEEEEecccccCCHHHHHHHHHHHHhCCC----C-EEEEEcCCCCCCcccCCchhHHH---Hh--CCCceEEcccCh-H
Q 012212 275 SVVYVAFGSVAVLSQQQFAELALGLESLQK----P-FLWVIRQDFMNGSRAKFPDGFIE---RV--SNRGKIVEWAPQ-E 343 (468)
Q Consensus 275 ~vv~vs~Gs~~~~~~~~~~~~~~a~~~~~~----~-~l~~~~~~~~~~~~~~~~~~~~~---~~--~~nv~~~~~~p~-~ 343 (468)
+.+++..|+.. +..-+..+++++..+.. + .++.++.+ . .+.+.+ +. .+||++.++..+ .
T Consensus 196 ~~~i~~~G~~~--~~K~~~~li~a~~~l~~~~~~~~~l~i~G~g----~----~~~~~~~~~~~~~~~~v~~~g~~~~~~ 265 (374)
T 2iw1_A 196 QNLLLQVGSDF--GRKGVDRSIEALASLPESLRHNTLLFVVGQD----K----PRKFEALAEKLGVRSNVHFFSGRNDVS 265 (374)
T ss_dssp CEEEEEECSCT--TTTTHHHHHHHHHTSCHHHHHTEEEEEESSS----C----CHHHHHHHHHHTCGGGEEEESCCSCHH
T ss_pred CeEEEEeccch--hhcCHHHHHHHHHHhHhccCCceEEEEEcCC----C----HHHHHHHHHHcCCCCcEEECCCcccHH
Confidence 35666678753 23345566777766532 2 33344433 1 122222 22 478898888654 6
Q ss_pred HHhcCCCCCceee----ccCchhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeeccCCCccCHHHHHHHHHHH
Q 012212 344 KVLGHSSVACFIS----HCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGIITRQEIQRKVLTL 419 (468)
Q Consensus 344 ~ll~~~~~~~~I~----hGG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~~~~~~t~~~l~~ai~~~ 419 (468)
.++..+++ +|. -|..+++.||+++|+|+|+... ..+...+++. +.|+.++.. -+.+++.++|.++
T Consensus 266 ~~~~~ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i~~~-~~g~~~~~~----~~~~~l~~~i~~l 334 (374)
T 2iw1_A 266 ELMAAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAV----CGYAHYIADA-NCGTVIAEP----FSQEQLNEVLRKA 334 (374)
T ss_dssp HHHHHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETT----STTTHHHHHH-TCEEEECSS----CCHHHHHHHHHHH
T ss_pred HHHHhcCE--EEeccccCCcccHHHHHHHCCCCEEEecC----CCchhhhccC-CceEEeCCC----CCHHHHHHHHHHH
Confidence 67866666 775 5667899999999999999754 4566777875 889988632 4799999999999
Q ss_pred hcChHHHHHHHHHHHHH
Q 012212 420 LKNDDIRSNSLKLKEVA 436 (468)
Q Consensus 420 l~~~~~r~~a~~l~~~~ 436 (468)
++|++.+++..+-+.+.
T Consensus 335 ~~~~~~~~~~~~~~~~~ 351 (374)
T 2iw1_A 335 LTQSPLRMAWAENARHY 351 (374)
T ss_dssp HHCHHHHHHHHHHHHHH
T ss_pred HcChHHHHHHHHHHHHH
Confidence 99988665554444443
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* | Back alignment and structure |
|---|
Probab=99.09 E-value=2.7e-08 Score=96.92 Aligned_cols=111 Identities=15% Similarity=0.102 Sum_probs=73.4
Q ss_pred CCCceEEcccC---h---HHHhcCCCCCceeecc----CchhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEee
Q 012212 331 SNRGKIVEWAP---Q---EKVLGHSSVACFISHC----GWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFF 400 (468)
Q Consensus 331 ~~nv~~~~~~p---~---~~ll~~~~~~~~I~hG----G~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~ 400 (468)
.++|++.+|++ + ..++..+++ +|.-. ...++.||+++|+|+|+.+. ..+...++.. +.|+.++
T Consensus 292 ~~~V~~~G~~~~~~~~~~~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i~~~-~~g~l~~ 364 (416)
T 2x6q_A 292 DYDVKVLTNLIGVHAREVNAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQIVDG-ETGFLVR 364 (416)
T ss_dssp CTTEEEEEGGGTCCHHHHHHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHCCBT-TTEEEES
T ss_pred CCcEEEecccCCCCHHHHHHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhheecC-CCeEEEC
Confidence 47899998876 2 346755655 77543 45789999999999999753 4556666553 6787775
Q ss_pred ccCCCccCHHHHHHHHHHHhcChHHHHHHHHHHH-HHHHHhcCCCchHHHHHHHHHHHHh
Q 012212 401 ADENGIITRQEIQRKVLTLLKNDDIRSNSLKLKE-VARKSLLGGGSSFRNFESFISDIKM 459 (468)
Q Consensus 401 ~~~~~~~t~~~l~~ai~~~l~~~~~r~~a~~l~~-~~~~~~~~~g~~~~~~~~~~~~~~~ 459 (468)
+.+++.++|.++++|++.+++..+-+. ...+ .=+....++++++.+++
T Consensus 365 -------d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~----~fs~~~~~~~~~~~~~~ 413 (416)
T 2x6q_A 365 -------DANEAVEVVLYLLKHPEVSKEMGAKAKERVRK----NFIITKHMERYLDILNS 413 (416)
T ss_dssp -------SHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH----HTBHHHHHHHHHHHHHT
T ss_pred -------CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH----HcCHHHHHHHHHHHHHH
Confidence 478999999999999886554333322 2222 11444555555555544
|
| >4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii} | Back alignment and structure |
|---|
Probab=99.07 E-value=5.3e-10 Score=107.23 Aligned_cols=319 Identities=13% Similarity=0.065 Sum_probs=166.2
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchH-HHHHhhhhhccCCCCCeEEEEcCC-CCCCCcCCCCCH
Q 012212 4 QPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHK-KIIASLQEKAEDSSSQIKLVTIPD-GLELQAADREDP 81 (468)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~-~i~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~ 81 (468)
|.|++++ .+++-.+.-+.+|.++|.++ ++..++.++...+ .+..-. . .++.+. -|+ .+.. ...+.
T Consensus 9 ~~~~~~v-~GtRpe~~k~~p~~~~l~~~-~~~~~~~tgqh~~~~~~~~~---~----~~~~i~-~~~~~l~~---~~~~~ 75 (385)
T 4hwg_A 9 MLKVMTI-VGTRPELIKLCCVISEFDKH-TKHILVHTGQNYAYELNQVF---F----DDMGIR-KPDYFLEV---AADNT 75 (385)
T ss_dssp CCEEEEE-ECSHHHHHHHHHHHHHHHHH-SEEEEEECSCHHHHHHTHHH---H----C-CCCC-CCSEECCC---CCCCS
T ss_pred hhheeEE-EEcCHhHHHHHHHHHHHHhc-CCEEEEEeCCCCChhHHHHH---H----hhCCCC-CCceecCC---CCCCH
Confidence 5666655 47778888999999999887 9988888776544 221110 0 222210 111 0111 11122
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEec--CCcccHHHHHHHhCCceEEEcccchHHHHHHhhhhhHhhcC
Q 012212 82 LKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIAD--VTVGSALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAG 159 (468)
Q Consensus 82 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D--~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~ 159 (468)
...... ....+.+++++ .+||+|++- ....++..+|..+|||++.+.. +
T Consensus 76 ---~~~~~~-~~~~l~~~l~~-------~kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~ea------------------g 126 (385)
T 4hwg_A 76 ---AKSIGL-VIEKVDEVLEK-------EKPDAVLFYGDTNSCLSAIAAKRRKIPIFHMEA------------------G 126 (385)
T ss_dssp ---HHHHHH-HHHHHHHHHHH-------HCCSEEEEESCSGGGGGHHHHHHTTCCEEEESC------------------C
T ss_pred ---HHHHHH-HHHHHHHHHHh-------cCCcEEEEECCchHHHHHHHHHHhCCCEEEEeC------------------C
Confidence 222222 22335666666 569998873 3333447899999999765432 1
Q ss_pred CCCCCCcccccCCcccccCCCccCcccccCcCCCCCChhHHHHHHHHHHHHHhhccccEEEEcCcccCChhhh-ccC-CC
Q 012212 160 IIDPNGFAILNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPAC-DLI-PN 237 (468)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~~-~~~-p~ 237 (468)
... +.. ..+ ....+.... .-++.++..+...-+.... -.. .+
T Consensus 127 lrs--------------------~~~-~~p------ee~nR~~~~---------~~a~~~~~~te~~~~~l~~~G~~~~~ 170 (385)
T 4hwg_A 127 NRC--------------------FDQ-RVP------EEINRKIID---------HISDVNITLTEHARRYLIAEGLPAEL 170 (385)
T ss_dssp CCC--------------------SCT-TST------HHHHHHHHH---------HHCSEEEESSHHHHHHHHHTTCCGGG
T ss_pred Ccc--------------------ccc-cCc------HHHHHHHHH---------hhhceeecCCHHHHHHHHHcCCCcCc
Confidence 000 000 000 000111111 1245666665543222111 111 36
Q ss_pred ceeeccccCCCCCCCCCCCCCCCCCchhhhhhcccCccEEEEEecccccCC-HHHHHHHHHHHHhC----CCCEEEEEcC
Q 012212 238 ILPIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLS-QQQFAELALGLESL----QKPFLWVIRQ 312 (468)
Q Consensus 238 v~~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~-~~~~~~~~~a~~~~----~~~~l~~~~~ 312 (468)
++.+|....+..... .. .....++.+.+.-. ++++++++.|...... .+.+..+++++.++ +..+++....
T Consensus 171 I~vtGnp~~D~~~~~--~~-~~~~~~~~~~lgl~-~~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p 246 (385)
T 4hwg_A 171 TFKSGSHMPEVLDRF--MP-KILKSDILDKLSLT-PKQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHP 246 (385)
T ss_dssp EEECCCSHHHHHHHH--HH-HHHHCCHHHHTTCC-TTSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECH
T ss_pred EEEECCchHHHHHHh--hh-hcchhHHHHHcCCC-cCCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECCh
Confidence 777884222110000 00 00011222333322 2458888887653222 24566777776543 4455554321
Q ss_pred CCCCCcccCCchhHHHH---h--CCCceEEcccCh---HHHhcCCCCCceeeccCchhHHHhhhcCCceeccccccchhh
Q 012212 313 DFMNGSRAKFPDGFIER---V--SNRGKIVEWAPQ---EKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQ 384 (468)
Q Consensus 313 ~~~~~~~~~~~~~~~~~---~--~~nv~~~~~~p~---~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~~~DQ~~ 384 (468)
. ..+.+.+. . .+|+++.+.+++ ..+++++++ +|+-.|. .+.||.+.|+|+|+++...+.+.
T Consensus 247 ~--------~~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adl--vvt~SGg-v~~EA~alG~Pvv~~~~~ter~e 315 (385)
T 4hwg_A 247 R--------TKKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFC--ILSDSGT-ITEEASILNLPALNIREAHERPE 315 (385)
T ss_dssp H--------HHHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCSE--EEECCTT-HHHHHHHTTCCEEECSSSCSCTH
T ss_pred H--------HHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcE--EEECCcc-HHHHHHHcCCCEEEcCCCccchh
Confidence 1 11111111 1 357888766655 467866766 9998776 46899999999999987554222
Q ss_pred hHHHHHHHhhceeEeeccCCCccCHHHHHHHHHHHhcChHHH
Q 012212 385 NRNYICEAWKIGLQFFADENGIITRQEIQRKVLTLLKNDDIR 426 (468)
Q Consensus 385 na~rv~~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~~~~r 426 (468)
. .++ |.++.++ .+.++|.+++.++|+|+..+
T Consensus 316 ---~-v~~-G~~~lv~------~d~~~i~~ai~~ll~d~~~~ 346 (385)
T 4hwg_A 316 ---G-MDA-GTLIMSG------FKAERVLQAVKTITEEHDNN 346 (385)
T ss_dssp ---H-HHH-TCCEECC------SSHHHHHHHHHHHHTTCBTT
T ss_pred ---h-hhc-CceEEcC------CCHHHHHHHHHHHHhChHHH
Confidence 2 354 8877664 46899999999999987744
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* | Back alignment and structure |
|---|
Probab=98.96 E-value=8.5e-08 Score=99.72 Aligned_cols=113 Identities=7% Similarity=0.012 Sum_probs=71.3
Q ss_pred CCCceEEcc----cChHHHhc----CCCCCceeec----cCchhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeE
Q 012212 331 SNRGKIVEW----APQEKVLG----HSSVACFISH----CGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQ 398 (468)
Q Consensus 331 ~~nv~~~~~----~p~~~ll~----~~~~~~~I~h----GG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~ 398 (468)
.++|++.++ +|+.++.. .+++ +|.- |-..++.||+++|+|+|+. |.......+... +.|+.
T Consensus 639 ~~~V~flG~~~~~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIas----d~GG~~EiV~dg-~~Gll 711 (816)
T 3s28_A 639 NGQFRWISSQMDRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVHG-KSGFH 711 (816)
T ss_dssp BBBEEEECCCCCHHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEE----SSBTHHHHCCBT-TTBEE
T ss_pred CCcEEEccCccccCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEe----CCCChHHHHccC-CcEEE
Confidence 478888874 44455443 2334 7742 3457999999999999997 555566666663 67888
Q ss_pred eeccCCCccCHHHHHHHHHHHh----cChHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHH
Q 012212 399 FFADENGIITRQEIQRKVLTLL----KNDDIRSNSLKLKEVARKSLLGGGSSFRNFESFISDIK 458 (468)
Q Consensus 399 l~~~~~~~~t~~~l~~ai~~~l----~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 458 (468)
++. -+.++++++|.+++ .|++.+++..+-+.+... +.=+-...++++++..+
T Consensus 712 v~p-----~D~e~LA~aI~~lL~~Ll~d~~~~~~m~~~ar~~a~---~~fSwe~~a~~ll~lY~ 767 (816)
T 3s28_A 712 IDP-----YHGDQAADTLADFFTKCKEDPSHWDEISKGGLQRIE---EKYTWQIYSQRLLTLTG 767 (816)
T ss_dssp ECT-----TSHHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHH---HSCCHHHHHHHHHHHHH
T ss_pred eCC-----CCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHH---HhCCHHHHHHHHHHHHH
Confidence 876 46899999997766 788765554443333221 12234455555554443
|
| >1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A | Back alignment and structure |
|---|
Probab=98.86 E-value=2.6e-07 Score=91.83 Aligned_cols=115 Identities=13% Similarity=0.068 Sum_probs=74.1
Q ss_pred CCCce-EEcccChH---HHhcCCCCCceee----ccCchhHHHhhhcCCceeccccccchhhhHHHHHHHh---------
Q 012212 331 SNRGK-IVEWAPQE---KVLGHSSVACFIS----HCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAW--------- 393 (468)
Q Consensus 331 ~~nv~-~~~~~p~~---~ll~~~~~~~~I~----hGG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~l--------- 393 (468)
++++. +.++ +.+ .++..+++ +|. -|-..++.||+++|+|+|+... ......+.+ -
T Consensus 345 ~~~v~~~~g~-~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v~~-~~~~~~~~~~ 416 (485)
T 1rzu_A 345 HGRVGVAIGY-NEPLSHLMQAGCDA--IIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTVID-ANHAALASKA 416 (485)
T ss_dssp TTTEEEEESC-CHHHHHHHHHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCB-CCHHHHHTTC
T ss_pred CCcEEEecCC-CHHHHHHHHhcCCE--EEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhheecc-cccccccccC
Confidence 57887 4588 543 46766655 773 3445789999999999999753 344444443 1
Q ss_pred hceeEeeccCCCccCHHHHHHHHHHHh---cChHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhhcccC
Q 012212 394 KIGLQFFADENGIITRQEIQRKVLTLL---KNDDIRSNSLKLKEVARKSLLGGGSSFRNFESFISDIKMLISGC 464 (468)
Q Consensus 394 G~g~~l~~~~~~~~t~~~l~~ai~~~l---~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 464 (468)
+.|+.++. -+.++++++|.+++ +|++.+++..+-+ +. +.=+-...++++++.+++.....
T Consensus 417 ~~G~l~~~-----~d~~~la~~i~~ll~~~~~~~~~~~~~~~~---~~---~~fs~~~~~~~~~~~y~~~~~~~ 479 (485)
T 1rzu_A 417 ATGVQFSP-----VTLDGLKQAIRRTVRYYHDPKLWTQMQKLG---MK---SDVSWEKSAGLYAALYSQLISKG 479 (485)
T ss_dssp CCBEEESS-----CSHHHHHHHHHHHHHHHTCHHHHHHHHHHH---HT---CCCBHHHHHHHHHHHHHHHTC--
T ss_pred CcceEeCC-----CCHHHHHHHHHHHHHHhCCHHHHHHHHHHH---HH---HhCChHHHHHHHHHHHHHhhCCC
Confidence 36777765 46899999999999 7887655443322 22 23344566666666666655443
|
| >2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A | Back alignment and structure |
|---|
Probab=98.86 E-value=6.2e-07 Score=89.10 Aligned_cols=117 Identities=10% Similarity=0.016 Sum_probs=75.1
Q ss_pred CCCce-EEcccChH---HHhcCCCCCceee----ccCchhHHHhhhcCCceeccccccchhhhHHHHHHHh---------
Q 012212 331 SNRGK-IVEWAPQE---KVLGHSSVACFIS----HCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAW--------- 393 (468)
Q Consensus 331 ~~nv~-~~~~~p~~---~ll~~~~~~~~I~----hGG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~l--------- 393 (468)
.+++. +.++ +.+ .++..+++ +|. -|...++.||+++|+|+|+... ......+.. -
T Consensus 346 ~~~v~~~~g~-~~~~~~~~~~~adv--~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v~~-~~~~~~~~~~ 417 (485)
T 2qzs_A 346 PGQVGVQIGY-HEAFSHRIMGGADV--ILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTVSD-CSLENLADGV 417 (485)
T ss_dssp TTTEEEEESC-CHHHHHHHHHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCB-CCHHHHHTTC
T ss_pred CCcEEEeCCC-CHHHHHHHHHhCCE--EEECCccCCCcHHHHHHHHCCCCEEECCC----CCccceecc-Cccccccccc
Confidence 46886 5588 543 46766665 773 2445689999999999999843 344444443 1
Q ss_pred hceeEeeccCCCccCHHHHHHHHHHHh---cChHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhhcccCCC
Q 012212 394 KIGLQFFADENGIITRQEIQRKVLTLL---KNDDIRSNSLKLKEVARKSLLGGGSSFRNFESFISDIKMLISGCDS 466 (468)
Q Consensus 394 G~g~~l~~~~~~~~t~~~l~~ai~~~l---~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 466 (468)
+.|+.++. -+.++++++|.+++ +|++.+++..+-+ +. +.=+-...++++++.+++....+.+
T Consensus 418 ~~G~l~~~-----~d~~~la~~i~~ll~~~~~~~~~~~~~~~~---~~---~~fs~~~~~~~~~~ly~~~~~~~~~ 482 (485)
T 2qzs_A 418 ASGFVFED-----SNAWSLLRAIRRAFVLWSRPSLWRFVQRQA---MA---MDFSWQVAAKSYRELYYRLKLEHHH 482 (485)
T ss_dssp CCBEEECS-----SSHHHHHHHHHHHHHHHTSHHHHHHHHHHH---HH---CCCCHHHHHHHHHHHHHHHC-----
T ss_pred cceEEECC-----CCHHHHHHHHHHHHHHcCCHHHHHHHHHHH---Hh---hcCCHHHHHHHHHHHHHHhhhhhcc
Confidence 36777765 46899999999999 7887665443332 22 2335567777777777777666554
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=98.79 E-value=4.2e-05 Score=77.46 Aligned_cols=119 Identities=14% Similarity=0.085 Sum_probs=73.9
Q ss_pred CCceEEcccChH---HHhcCCCCCceee---ccCchhHHHhhhcCCceeccccccchhh-hHHHHHHHhhceeEeeccCC
Q 012212 332 NRGKIVEWAPQE---KVLGHSSVACFIS---HCGWNSTMEGLSMGVPFLCWPYFSDQYQ-NRNYICEAWKIGLQFFADEN 404 (468)
Q Consensus 332 ~nv~~~~~~p~~---~ll~~~~~~~~I~---hGG~~s~~eal~~GvP~v~~P~~~DQ~~-na~rv~~~lG~g~~l~~~~~ 404 (468)
++|++.+++|+. .++..+++ ||. .|+..++.||+++|+|+|++|-..=..+ .+..+.. .|+...+..
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~-~g~~e~v~~--- 507 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLNHH-LGLDEMNVA--- 507 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHH-HTCGGGBCS---
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHH-CCChhhhcC---
Confidence 788999999864 45655655 762 3667899999999999999763211111 2344555 376655532
Q ss_pred CccCHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhh
Q 012212 405 GIITRQEIQRKVLTLLKNDDIRSNSLKLKEVARKSLLGGGSSFRNFESFISDIKML 460 (468)
Q Consensus 405 ~~~t~~~l~~ai~~~l~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 460 (468)
+.+++.++|.++++|++.+++..+-+.+.... .+.-+....++++.+.+++.
T Consensus 508 ---~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~-~~~f~~~~~~~~~~~~y~~~ 559 (568)
T 2vsy_A 508 ---DDAAFVAKAVALASDPAALTALHARVDVLRRA-SGVFHMDGFADDFGALLQAL 559 (568)
T ss_dssp ---SHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH-SSTTCHHHHHHHHHHHHHHH
T ss_pred ---CHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhc-CCCCCHHHHHHHHHHHHHHH
Confidence 68999999999999998666544333222200 12334445555555444433
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=98.62 E-value=9.1e-08 Score=81.20 Aligned_cols=139 Identities=9% Similarity=0.112 Sum_probs=91.0
Q ss_pred EEEEecccccCCHHHHHHHHHHHHhC-CCCEEEEEcCCCCCCcccCCchhHH---HHhCCCceEEcccCh---HHHhcCC
Q 012212 277 VYVAFGSVAVLSQQQFAELALGLESL-QKPFLWVIRQDFMNGSRAKFPDGFI---ERVSNRGKIVEWAPQ---EKVLGHS 349 (468)
Q Consensus 277 v~vs~Gs~~~~~~~~~~~~~~a~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~---~~~~~nv~~~~~~p~---~~ll~~~ 349 (468)
+++..|+.. ...-+..+++++..+ +.+++++-.+. ....+..-.. ...++|+++.+|+|+ ..++..+
T Consensus 25 ~i~~~G~~~--~~Kg~~~li~a~~~l~~~~l~i~G~~~----~~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~a 98 (177)
T 2f9f_A 25 FWLSVNRIY--PEKRIELQLEVFKKLQDEKLYIVGWFS----KGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSRC 98 (177)
T ss_dssp CEEEECCSS--GGGTHHHHHHHHHHCTTSCEEEEBCCC----TTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHHC
T ss_pred EEEEEeccc--cccCHHHHHHHHHhCCCcEEEEEecCc----cHHHHHHHHHhhhcccCCcEEEeCCCCHHHHHHHHHhC
Confidence 444567753 234466777888776 44555543322 1111111111 123569999999998 5577666
Q ss_pred CCCceee---ccCc-hhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeeccCCCccCHHHHHHHHHHHhcChHH
Q 012212 350 SVACFIS---HCGW-NSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGIITRQEIQRKVLTLLKNDDI 425 (468)
Q Consensus 350 ~~~~~I~---hGG~-~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~~~~ 425 (468)
++ +|. +.|. .++.||+++|+|+|+.. ...+...+++. +.|+.+ . -+.+++.++|.++++|++.
T Consensus 99 di--~v~ps~~e~~~~~~~Eama~G~PvI~~~----~~~~~e~i~~~-~~g~~~-~-----~d~~~l~~~i~~l~~~~~~ 165 (177)
T 2f9f_A 99 KG--LLCTAKDEDFGLTPIEAMASGKPVIAVN----EGGFKETVINE-KTGYLV-N-----ADVNEIIDAMKKVSKNPDK 165 (177)
T ss_dssp SE--EEECCSSCCSCHHHHHHHHTTCCEEEES----SHHHHHHCCBT-TTEEEE-C-----SCHHHHHHHHHHHHHCTTT
T ss_pred CE--EEeCCCcCCCChHHHHHHHcCCcEEEeC----CCCHHHHhcCC-CccEEe-C-----CCHHHHHHHHHHHHhCHHH
Confidence 66 776 3344 59999999999999974 45566666653 678887 3 5799999999999998885
Q ss_pred -HHHHHHHHH
Q 012212 426 -RSNSLKLKE 434 (468)
Q Consensus 426 -r~~a~~l~~ 434 (468)
++++++.++
T Consensus 166 ~~~~~~~~a~ 175 (177)
T 2f9f_A 166 FKKDCFRRAK 175 (177)
T ss_dssp THHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 666666554
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* | Back alignment and structure |
|---|
Probab=98.59 E-value=3.3e-06 Score=81.87 Aligned_cols=111 Identities=14% Similarity=0.072 Sum_probs=70.4
Q ss_pred ceEEcccChHH---HhcCCCCCceee----ccCchhHHHhhhcCCceeccccccchhhhHHHHHHHhhc-----------
Q 012212 334 GKIVEWAPQEK---VLGHSSVACFIS----HCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKI----------- 395 (468)
Q Consensus 334 v~~~~~~p~~~---ll~~~~~~~~I~----hGG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~----------- 395 (468)
+.+.+|+|+.+ ++..+++ +|. -|...++.||+++|+|+|+.. -......+.+ |.
T Consensus 256 v~~~g~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~----~~g~~e~v~~--~~~~~i~~~~~~~ 327 (413)
T 3oy2_A 256 MINRTVLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISA----VGGADDYFSG--DCVYKIKPSAWIS 327 (413)
T ss_dssp EEECSCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEEC----CHHHHHHSCT--TTSEEECCCEEEE
T ss_pred eeccCcCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcC----CCChHHHHcc--Ccccccccccccc
Confidence 55559999644 6656655 773 344568999999999999874 3444444443 33
Q ss_pred -----ee--EeeccCCCccCHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhhc
Q 012212 396 -----GL--QFFADENGIITRQEIQRKVLTLLKNDDIRSNSLKLKEVARKSLLGGGSSFRNFESFISDIKMLI 461 (468)
Q Consensus 396 -----g~--~l~~~~~~~~t~~~l~~ai~~~l~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 461 (468)
|+ .++. -+.++++++| ++++|++.+++..+-+.+... +.=+-...++++.+.+++..
T Consensus 328 ~~~~~G~~gl~~~-----~d~~~la~~i-~l~~~~~~~~~~~~~a~~~~~---~~fs~~~~~~~~~~~~~~~~ 391 (413)
T 3oy2_A 328 VDDRDGIGGIEGI-----IDVDDLVEAF-TFFKDEKNRKEYGKRVQDFVK---TKPTWDDISSDIIDFFNSLL 391 (413)
T ss_dssp CTTTCSSCCEEEE-----CCHHHHHHHH-HHTTSHHHHHHHHHHHHHHHT---TSCCHHHHHHHHHHHHHHHT
T ss_pred cccccCcceeeCC-----CCHHHHHHHH-HHhcCHHHHHHHHHHHHHHHH---HhCCHHHHHHHHHHHHHHHH
Confidence 55 5554 4799999999 999998866544443333321 23244555555555555443
|
| >2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* | Back alignment and structure |
|---|
Probab=98.56 E-value=7.3e-06 Score=79.27 Aligned_cols=76 Identities=8% Similarity=0.025 Sum_probs=57.9
Q ss_pred CCCceEEcccChHH---HhcCCCCCceee---ccC-chhHHHhh-------hcCCceeccccccchhhhHHHHHHHhhce
Q 012212 331 SNRGKIVEWAPQEK---VLGHSSVACFIS---HCG-WNSTMEGL-------SMGVPFLCWPYFSDQYQNRNYICEAWKIG 396 (468)
Q Consensus 331 ~~nv~~~~~~p~~~---ll~~~~~~~~I~---hGG-~~s~~eal-------~~GvP~v~~P~~~DQ~~na~rv~~~lG~g 396 (468)
.+||++.+++|+.+ ++..+++ +|. +.| .+++.||+ ++|+|+|+... +... ..|
T Consensus 264 ~~~V~f~G~~~~~~l~~~~~~adv--~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~~-~~G 330 (406)
T 2hy7_A 264 GDNVIVYGEMKHAQTIGYIKHARF--GIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVGP-YKS 330 (406)
T ss_dssp CTTEEEECCCCHHHHHHHHHTCSE--EECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTCS-CSS
T ss_pred CCCEEEcCCCCHHHHHHHHHhcCE--EEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------cccC-cce
Confidence 57889999999754 5656655 663 334 46789999 99999999854 4443 568
Q ss_pred eE-eeccCCCccCHHHHHHHHHHHhcChH
Q 012212 397 LQ-FFADENGIITRQEIQRKVLTLLKNDD 424 (468)
Q Consensus 397 ~~-l~~~~~~~~t~~~l~~ai~~~l~~~~ 424 (468)
+. ++. -+.++++++|.++++|++
T Consensus 331 ~l~v~~-----~d~~~la~ai~~ll~~~~ 354 (406)
T 2hy7_A 331 RFGYTP-----GNADSVIAAITQALEAPR 354 (406)
T ss_dssp EEEECT-----TCHHHHHHHHHHHHHCCC
T ss_pred EEEeCC-----CCHHHHHHHHHHHHhCcc
Confidence 77 665 368999999999999886
|
| >2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A* | Back alignment and structure |
|---|
Probab=98.51 E-value=1.9e-05 Score=75.47 Aligned_cols=92 Identities=16% Similarity=0.264 Sum_probs=62.1
Q ss_pred CceEEcccCh-HHHhcCCCCCceee---c--cCchhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeeccCCCc
Q 012212 333 RGKIVEWAPQ-EKVLGHSSVACFIS---H--CGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGI 406 (468)
Q Consensus 333 nv~~~~~~p~-~~ll~~~~~~~~I~---h--GG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~~~~~ 406 (468)
++.+.++..+ ..+++.+++ ++. . +|..++.||+++|+|+|+-|...+..+....+.+. |.++..
T Consensus 261 ~v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~-G~l~~~------- 330 (374)
T 2xci_A 261 DVILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKE-GAGFEV------- 330 (374)
T ss_dssp SEEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHT-TCEEEC-------
T ss_pred cEEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHC-CCEEEe-------
Confidence 4555565543 557755554 554 1 24478999999999999877766666666655554 766554
Q ss_pred cCHHHHHHHHHHHhcChH----HHHHHHHHHHH
Q 012212 407 ITRQEIQRKVLTLLKNDD----IRSNSLKLKEV 435 (468)
Q Consensus 407 ~t~~~l~~ai~~~l~~~~----~r~~a~~l~~~ 435 (468)
-+.+++.++|.++|+| + +.+++++..+.
T Consensus 331 ~d~~~La~ai~~ll~d-~~r~~mg~~ar~~~~~ 362 (374)
T 2xci_A 331 KNETELVTKLTELLSV-KKEIKVEEKSREIKGC 362 (374)
T ss_dssp CSHHHHHHHHHHHHHS-CCCCCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHh
Confidence 2579999999999998 6 44455544433
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=98.08 E-value=9.6e-05 Score=76.57 Aligned_cols=171 Identities=13% Similarity=0.054 Sum_probs=108.8
Q ss_pred CccEEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCcccCCchhHHHHh------CCCceEEcccChHHHh
Q 012212 273 IRSVVYVAFGSVAVLSQQQFAELALGLESLQKPFLWVIRQDFMNGSRAKFPDGFIERV------SNRGKIVEWAPQEKVL 346 (468)
Q Consensus 273 ~~~vv~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~------~~nv~~~~~~p~~~ll 346 (468)
++.+||.+|.+.....++.+....+-|.+.+.-++|...... ....++.+.. ++++++.+..|..+-|
T Consensus 521 ~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~------~~~~~l~~~~~~~gi~~~r~~f~~~~~~~~~l 594 (723)
T 4gyw_A 521 EDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPA------VGEPNIQQYAQNMGLPQNRIIFSPVAPKEEHV 594 (723)
T ss_dssp TTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTG------GGHHHHHHHHHHTTCCGGGEEEEECCCHHHHH
T ss_pred CCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcH------HHHHHHHHHHHhcCCCcCeEEECCCCCHHHHH
Confidence 345999999998889999999999999999998888876541 1112222211 4677888989876544
Q ss_pred c-CCCCCceee---ccCchhHHHhhhcCCceecccc-ccchhhhHHHHHHHhhceeEeeccCCCccCHHHHHHHHHHHhc
Q 012212 347 G-HSSVACFIS---HCGWNSTMEGLSMGVPFLCWPY-FSDQYQNRNYICEAWKIGLQFFADENGIITRQEIQRKVLTLLK 421 (468)
Q Consensus 347 ~-~~~~~~~I~---hGG~~s~~eal~~GvP~v~~P~-~~DQ~~na~rv~~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~ 421 (468)
. +..+|+++- .+|.+|+.|||++|||+|+++= ..=-+.-+..+.. +|+.-.+-.+ ..+-+..|| ++-+
T Consensus 595 ~~~~~~Di~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~-~gl~e~ia~~-----~~~Y~~~a~-~la~ 667 (723)
T 4gyw_A 595 RRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTC-LGCLELIAKN-----RQEYEDIAV-KLGT 667 (723)
T ss_dssp HHGGGCSEEECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHH-HTCGGGBCSS-----HHHHHHHHH-HHHH
T ss_pred HHhCCCeEEeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHH-cCCcccccCC-----HHHHHHHHH-HHhc
Confidence 2 344555764 8889999999999999999983 2233344445555 4776555432 244455555 6767
Q ss_pred ChHHHHHHH-HHHHHHHHHhcCCCchHHHHHHHHHHHH
Q 012212 422 NDDIRSNSL-KLKEVARKSLLGGGSSFRNFESFISDIK 458 (468)
Q Consensus 422 ~~~~r~~a~-~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 458 (468)
|++.++..+ +|.+++.++ .--.......+|-+.++
T Consensus 668 d~~~l~~lr~~l~~~~~~s--~l~d~~~~~~~le~a~~ 703 (723)
T 4gyw_A 668 DLEYLKKVRGKVWKQRISS--PLFNTKQYTMELERLYL 703 (723)
T ss_dssp CHHHHHHHHHHHHHHHHHS--STTCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhC--cCcCHHHHHHHHHHHHH
Confidence 877555543 455555442 11233344444444444
|
| >3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula} | Back alignment and structure |
|---|
Probab=97.88 E-value=0.00057 Score=64.34 Aligned_cols=105 Identities=13% Similarity=0.098 Sum_probs=72.9
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHHC--CCEEEEEECCcchHHHHHhhhhhccCCCCCeE-EEEcCCCCCCCcCCCC
Q 012212 3 RQPHVLVIPYPAQGHVAPLMKLATKIAER--AIKVTVVNTQFIHKKIIASLQEKAEDSSSQIK-LVTIPDGLELQAADRE 79 (468)
Q Consensus 3 ~~~~Il~~~~~~~GH~~p~~~LA~~L~~r--GH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~ 79 (468)
..+|||++-..+.|++.-..++.++|+++ +.+|++++.+.+.+.++.. +.++ ++.++..
T Consensus 7 ~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~~---------p~vd~vi~~~~~--------- 68 (349)
T 3tov_A 7 DYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEYN---------PNIDELIVVDKK--------- 68 (349)
T ss_dssp TTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSSC---------TTCSEEEEECCS---------
T ss_pred CCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcC---------CCccEEEEeCcc---------
Confidence 45899999999999999999999999988 9999999999887776542 4454 4544421
Q ss_pred CHHHHHHHHHHHhhHHHHHHHHHHhhCCCCCCc-eEEEecCCcccHHHHHHHhCCceEE
Q 012212 80 DPLKLGESVARAMRGCLRDLIEKINQSNDCEPI-RCVIADVTVGSALEVAESMGIARAA 137 (468)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~p-Dlvi~D~~~~~~~~~A~~lgiP~v~ 137 (468)
.... .+ ..+.++++.++. .++ |++|.=....-...++...|+|..+
T Consensus 69 ~~~~---~~-----~~~~~l~~~Lr~----~~y~D~vidl~~~~rs~~l~~~~~a~~ri 115 (349)
T 3tov_A 69 GRHN---SI-----SGLNEVAREINA----KGKTDIVINLHPNERTSYLAWKIHAPITT 115 (349)
T ss_dssp SHHH---HH-----HHHHHHHHHHHH----HCCCCEEEECCCSHHHHHHHHHHCCSEEE
T ss_pred cccc---cH-----HHHHHHHHHHhh----CCCCeEEEECCCChHHHHHHHHhCCCeEE
Confidence 1111 11 112344555555 359 9998644444556688888999755
|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=97.83 E-value=0.00025 Score=60.78 Aligned_cols=85 Identities=18% Similarity=0.119 Sum_probs=62.9
Q ss_pred CceE-EcccChH---HHhcCCCCCceeec----cCchhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeeccCC
Q 012212 333 RGKI-VEWAPQE---KVLGHSSVACFISH----CGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADEN 404 (468)
Q Consensus 333 nv~~-~~~~p~~---~ll~~~~~~~~I~h----GG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~~~ 404 (468)
++++ .+++|+. .++..+++ +|.- |...++.||+++|+|+|+.. -......+ .. +.|+.++.
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~----~~~~~e~~-~~-~~g~~~~~--- 164 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASA----VGGLRDII-TN-ETGILVKA--- 164 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEES----CHHHHHHC-CT-TTCEEECT---
T ss_pred CEEEEeccCCHHHHHHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeC----CCChHHHc-CC-CceEEecC---
Confidence 8999 8999854 46766655 7743 23478999999999999874 34455555 53 67888865
Q ss_pred CccCHHHHHHHHHHHhc-ChHHHHHHH
Q 012212 405 GIITRQEIQRKVLTLLK-NDDIRSNSL 430 (468)
Q Consensus 405 ~~~t~~~l~~ai~~~l~-~~~~r~~a~ 430 (468)
-+.+++.++|.++++ |++.+++..
T Consensus 165 --~~~~~l~~~i~~l~~~~~~~~~~~~ 189 (200)
T 2bfw_A 165 --GDPGELANAILKALELSRSDLSKFR 189 (200)
T ss_dssp --TCHHHHHHHHHHHHHCCHHHHHHHH
T ss_pred --CCHHHHHHHHHHHHhcCHHHHHHHH
Confidence 469999999999999 988554433
|
| >3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A | Back alignment and structure |
|---|
Probab=97.82 E-value=0.00023 Score=70.84 Aligned_cols=142 Identities=11% Similarity=0.086 Sum_probs=92.0
Q ss_pred ccEEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEE--cCCCCCCcccCCchhHHH-----HhCCCceEEcccChHHHh
Q 012212 274 RSVVYVAFGSVAVLSQQQFAELALGLESLQKPFLWVI--RQDFMNGSRAKFPDGFIE-----RVSNRGKIVEWAPQEKVL 346 (468)
Q Consensus 274 ~~vv~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~-----~~~~nv~~~~~~p~~~ll 346 (468)
+.++|.++++.....++.++...+-+.+.+..++|.. +.. ......+.+ -+.+++++.+.+|+.+.+
T Consensus 440 G~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~------~g~~~~~~~~~~~~GI~~Rv~F~g~~p~~e~l 513 (631)
T 3q3e_A 440 EVVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQS------NGITHPYVERFIKSYLGDSATAHPHSPYHQYL 513 (631)
T ss_dssp SEEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSC------CGGGHHHHHHHHHHHHGGGEEEECCCCHHHHH
T ss_pred CeEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCC------chhhHHHHHHHHHcCCCccEEEcCCCCHHHHH
Confidence 3589999998888889999999988888887777643 311 011111111 135678888999976644
Q ss_pred ---cCCCCCcee---eccCchhHHHhhhcCCceeccccc-cchhhhHHHHHHHhhceeE-eeccCCCccCHHHHHHHHHH
Q 012212 347 ---GHSSVACFI---SHCGWNSTMEGLSMGVPFLCWPYF-SDQYQNRNYICEAWKIGLQ-FFADENGIITRQEIQRKVLT 418 (468)
Q Consensus 347 ---~~~~~~~~I---~hGG~~s~~eal~~GvP~v~~P~~-~DQ~~na~rv~~~lG~g~~-l~~~~~~~~t~~~l~~ai~~ 418 (468)
..+++ ++ ..+|.+|+.||+++|||+|+++-. .--..-+..+.. +|+.-. +. -+.++..+...+
T Consensus 514 a~y~~aDI--fLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~-~GLpE~LIA------~d~eeYv~~Av~ 584 (631)
T 3q3e_A 514 RILHNCDM--MVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKR-LGLPEWLIA------NTVDEYVERAVR 584 (631)
T ss_dssp HHHHTCSE--EECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHH-TTCCGGGEE------SSHHHHHHHHHH
T ss_pred HHHhcCcE--EEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHh-cCCCcceec------CCHHHHHHHHHH
Confidence 44444 54 347889999999999999998632 111222222334 365432 32 357777777779
Q ss_pred HhcChHHHHHHH
Q 012212 419 LLKNDDIRSNSL 430 (468)
Q Consensus 419 ~l~~~~~r~~a~ 430 (468)
+.+|++.+++.+
T Consensus 585 La~D~~~l~~LR 596 (631)
T 3q3e_A 585 LAENHQERLELR 596 (631)
T ss_dssp HHHCHHHHHHHH
T ss_pred HhCCHHHHHHHH
Confidence 999998665543
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=97.73 E-value=0.00014 Score=60.26 Aligned_cols=134 Identities=10% Similarity=0.218 Sum_probs=78.4
Q ss_pred cEEEEEecccccCCHHHHHHHHHHHHhCC--CCEEEEEcCCCCCCcccCCchhHH---HHhCCCceEEcccChHH---Hh
Q 012212 275 SVVYVAFGSVAVLSQQQFAELALGLESLQ--KPFLWVIRQDFMNGSRAKFPDGFI---ERVSNRGKIVEWAPQEK---VL 346 (468)
Q Consensus 275 ~vv~vs~Gs~~~~~~~~~~~~~~a~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~---~~~~~nv~~~~~~p~~~---ll 346 (468)
+++++..|+.. ...-+..+++++..+. .++.+.+-+. ....+.+. ++...++++ +|+|+.+ ++
T Consensus 2 ~~~i~~~G~~~--~~Kg~~~li~a~~~l~~~~~~~l~i~G~------g~~~~~~~~~~~~~~~~v~~-g~~~~~~~~~~~ 72 (166)
T 3qhp_A 2 PFKIAMVGRYS--NEKNQSVLIKAVALSKYKQDIVLLLKGK------GPDEKKIKLLAQKLGVKAEF-GFVNSNELLEIL 72 (166)
T ss_dssp CEEEEEESCCS--TTTTHHHHHHHHHTCTTGGGEEEEEECC------STTHHHHHHHHHHHTCEEEC-CCCCHHHHHHHH
T ss_pred ceEEEEEeccc--hhcCHHHHHHHHHHhccCCCeEEEEEeC------CccHHHHHHHHHHcCCeEEE-eecCHHHHHHHH
Confidence 35677778763 2344566777776653 2333333332 01122222 223447777 9999754 66
Q ss_pred cCCCCCceee----ccCchhHHHhhhcCC-ceeccccccchhhhHHHHHHHhhceeEeeccCCCccCHHHHHHHHHHHhc
Q 012212 347 GHSSVACFIS----HCGWNSTMEGLSMGV-PFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGIITRQEIQRKVLTLLK 421 (468)
Q Consensus 347 ~~~~~~~~I~----hGG~~s~~eal~~Gv-P~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~ 421 (468)
..+++ +|. -|...++.||+++|+ |+|+....+ .....+... +. .++. -+.+++.++|.++++
T Consensus 73 ~~adv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~---~~~~~~~~~-~~--~~~~-----~~~~~l~~~i~~l~~ 139 (166)
T 3qhp_A 73 KTCTL--YVHAANVESEAIACLEAISVGIVPVIANSPLS---ATRQFALDE-RS--LFEP-----NNAKDLSAKIDWWLE 139 (166)
T ss_dssp TTCSE--EEECCCSCCCCHHHHHHHHTTCCEEEECCTTC---GGGGGCSSG-GG--EECT-----TCHHHHHHHHHHHHH
T ss_pred HhCCE--EEECCcccCccHHHHHHHhcCCCcEEeeCCCC---chhhhccCC-ce--EEcC-----CCHHHHHHHHHHHHh
Confidence 55555 775 344579999999996 999943211 111222221 33 3333 479999999999999
Q ss_pred ChHHHHHHH
Q 012212 422 NDDIRSNSL 430 (468)
Q Consensus 422 ~~~~r~~a~ 430 (468)
|++.+++..
T Consensus 140 ~~~~~~~~~ 148 (166)
T 3qhp_A 140 NKLERERMQ 148 (166)
T ss_dssp CHHHHHHHH
T ss_pred CHHHHHHHH
Confidence 988554443
|
| >1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7 | Back alignment and structure |
|---|
Probab=97.44 E-value=0.0075 Score=56.55 Aligned_cols=102 Identities=15% Similarity=0.135 Sum_probs=67.5
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHHC--CCEEEEEECCcchHHHHHhhhhhccCCCCCe-EEEEcCCCCCCCcCCCCCH
Q 012212 5 PHVLVIPYPAQGHVAPLMKLATKIAER--AIKVTVVNTQFIHKKIIASLQEKAEDSSSQI-KLVTIPDGLELQAADREDP 81 (468)
Q Consensus 5 ~~Il~~~~~~~GH~~p~~~LA~~L~~r--GH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~~~ 81 (468)
||||++...+.|++.-..++.++|+++ +.+|++++.+.+.+.+... +.+ +++.++.. . ....
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~~~---------p~i~~v~~~~~~--~---~~~~- 65 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSRM---------PEVNEAIPMPLG--H---GALE- 65 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTTC---------TTEEEEEEC------------C-
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcC---------CccCEEEEecCC--c---cccc-
Confidence 589999988889999999999999987 9999999998777655331 345 34444310 0 0000
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCc-ccHHHHHHHhCCceEE
Q 012212 82 LKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTV-GSALEVAESMGIARAA 137 (468)
Q Consensus 82 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~-~~~~~~A~~lgiP~v~ 137 (468)
...+.++.+.++. .+||++| |... .-...++...|+|..+
T Consensus 66 -----------~~~~~~l~~~l~~----~~~D~vi-d~~~~~~sa~~~~~~~~~~~i 106 (348)
T 1psw_A 66 -----------IGERRKLGHSLRE----KRYDRAY-VLPNSFKSALVPLFAGIPHRT 106 (348)
T ss_dssp -----------HHHHHHHHHHTTT----TTCSEEE-ECSCCSGGGHHHHHTTCSEEE
T ss_pred -----------hHHHHHHHHHHHh----cCCCEEE-ECCCChHHHHHHHHhCCCEEe
Confidence 0123455566655 5699998 4332 3455678888999743
|
| >3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* | Back alignment and structure |
|---|
Probab=97.17 E-value=0.00057 Score=63.86 Aligned_cols=109 Identities=16% Similarity=0.182 Sum_probs=76.8
Q ss_pred CceEEcccChHHHh---cCCCCCceeeccC---------chhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEee
Q 012212 333 RGKIVEWAPQEKVL---GHSSVACFISHCG---------WNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFF 400 (468)
Q Consensus 333 nv~~~~~~p~~~ll---~~~~~~~~I~hGG---------~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~ 400 (468)
||.+.+|+|+.++. ..++..++..-+. .+-+.|++++|+|+|+. +...++..+++. |+|+.++
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~----~~~~~~~~v~~~-~~G~~~~ 289 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQ----EGIANQELIENN-GLGWIVK 289 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEE----TTCTTTHHHHHH-TCEEEES
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEc----cChhHHHHHHhC-CeEEEeC
Confidence 88999999997754 3344443432332 23578999999999975 466788889997 9999884
Q ss_pred ccCCCccCHHHHHHHHHHHhcCh--HHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHH
Q 012212 401 ADENGIITRQEIQRKVLTLLKND--DIRSNSLKLKEVARKSLLGGGSSFRNFESFISDI 457 (468)
Q Consensus 401 ~~~~~~~t~~~l~~ai~~~l~~~--~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 457 (468)
+.+++.+++.++..+. ++++|+++.+++++. +-...+++.+.+..+
T Consensus 290 -------~~~e~~~~i~~l~~~~~~~m~~na~~~a~~~~~----~~f~k~~l~~~~~~~ 337 (339)
T 3rhz_A 290 -------DVEEAIMKVKNVNEDEYIELVKNVRSFNPILRK----GFFTRRLLTESVFQA 337 (339)
T ss_dssp -------SHHHHHHHHHHCCHHHHHHHHHHHHHHTHHHHT----THHHHHHHHHHHHHH
T ss_pred -------CHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhc----cHHHHHHHHHHHHHh
Confidence 3678888888865332 277888888888776 545555655555443
|
| >2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A* | Back alignment and structure |
|---|
Probab=96.66 E-value=0.025 Score=52.36 Aligned_cols=45 Identities=18% Similarity=0.105 Sum_probs=40.8
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHHC--CCEEEEEECCcchHHHHH
Q 012212 5 PHVLVIPYPAQGHVAPLMKLATKIAER--AIKVTVVNTQFIHKKIIA 49 (468)
Q Consensus 5 ~~Il~~~~~~~GH~~p~~~LA~~L~~r--GH~Vt~~~~~~~~~~i~~ 49 (468)
||||++-..+.|++.-..++.++|+++ +.+|++++.+.+.+.+..
T Consensus 1 ~~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~~~ 47 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIPSW 47 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGGGTHHHHT
T ss_pred CeEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehhhhHHHhc
Confidence 589999999999999999999999988 899999999988777654
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* | Back alignment and structure |
|---|
Probab=95.97 E-value=0.0032 Score=60.73 Aligned_cols=85 Identities=14% Similarity=0.055 Sum_probs=57.3
Q ss_pred CCCceEEcccChHH---HhcCCCCCceeecc---Cc-hhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeeccC
Q 012212 331 SNRGKIVEWAPQEK---VLGHSSVACFISHC---GW-NSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADE 403 (468)
Q Consensus 331 ~~nv~~~~~~p~~~---ll~~~~~~~~I~hG---G~-~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~~ 403 (468)
.++|++.+++|+.+ +++.+++ ||.-. |. .++.||+++|+|+|+- ..+ ....++.. ..|+.++.
T Consensus 294 ~~~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~~-~~g----~~e~v~~~-~~G~lv~~-- 363 (413)
T 2x0d_A 294 GIHLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVITN-KYE----NKDLSNWH-SNIVSLEQ-- 363 (413)
T ss_dssp TEEEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEEE-CBT----TBCGGGTB-TTEEEESS--
T ss_pred cCcEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEEe-CCC----cchhhhcC-CCEEEeCC--
Confidence 45788889998765 5655655 77422 33 5789999999999973 221 12233442 46877766
Q ss_pred CCccCHHHHHHHHHHHhcChHHHHH
Q 012212 404 NGIITRQEIQRKVLTLLKNDDIRSN 428 (468)
Q Consensus 404 ~~~~t~~~l~~ai~~~l~~~~~r~~ 428 (468)
-+.++++++|.++++|++.+++
T Consensus 364 ---~d~~~la~ai~~ll~~~~~~~~ 385 (413)
T 2x0d_A 364 ---LNPENIAETLVELCMSFNNRDV 385 (413)
T ss_dssp ---CSHHHHHHHHHHHHHHTC----
T ss_pred ---CCHHHHHHHHHHHHcCHHHHHH
Confidence 4689999999999998887765
|
| >3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* | Back alignment and structure |
|---|
Probab=93.73 E-value=0.77 Score=45.55 Aligned_cols=133 Identities=11% Similarity=0.102 Sum_probs=72.9
Q ss_pred EEEEecccccCCHHHHHHHHHHHH---hCCCCEEEEEcCCCCCCcccCCchhHHHHhCCCceEEcccChHH---HhcCCC
Q 012212 277 VYVAFGSVAVLSQQQFAELALGLE---SLQKPFLWVIRQDFMNGSRAKFPDGFIERVSNRGKIVEWAPQEK---VLGHSS 350 (468)
Q Consensus 277 v~vs~Gs~~~~~~~~~~~~~~a~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~---ll~~~~ 350 (468)
+++..|... +.+-+..+++++. +.+.+++++..+.. .....-.......+.++.+....+... +++.++
T Consensus 329 ~i~~vgRl~--~~Kg~~~li~a~~~l~~~~~~l~l~G~G~~---~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~aD 403 (536)
T 3vue_A 329 LIAFIGRLE--EQKGPDVMAAAIPELMQEDVQIVLLGTGKK---KFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMAGAD 403 (536)
T ss_dssp EEEEECCBS--GGGCHHHHHHHHHHHTTSSCEEEEECCBCH---HHHHHHHHHHHHSTTTEEEECSCCHHHHHHHHHHCS
T ss_pred EEEEEeecc--ccCChHHHHHHHHHhHhhCCeEEEEeccCc---hHHHHHHHHHhhcCCceEEEEeccHHHHHHHHHhhh
Confidence 444467763 2233444555554 34555555544330 000000112233477888887776643 565555
Q ss_pred CCceeec---cCc-hhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeeccC-CC----ccCHHHHHHHHHHHhc
Q 012212 351 VACFISH---CGW-NSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADE-NG----IITRQEIQRKVLTLLK 421 (468)
Q Consensus 351 ~~~~I~h---GG~-~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~~-~~----~~t~~~l~~ai~~~l~ 421 (468)
+ ||.- =|. .+++||+++|+|+|+.. .......|.+. .-|....... ++ ..+.+.|.++|+++|+
T Consensus 404 ~--~v~PS~~E~fgl~~lEAma~G~PvI~s~----~gG~~e~V~dg-~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~ 476 (536)
T 3vue_A 404 V--LAVPSRFEPCGLIQLQGMRYGTPCACAS----TGGLVDTVIEG-KTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIK 476 (536)
T ss_dssp E--EEECCSCCSSCSHHHHHHHTTCCEEECS----CTHHHHHCCBT-TTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHH
T ss_pred e--eecccccCCCCHHHHHHHHcCCCEEEcC----CCCchheeeCC-CCccccccCCCceeEECCCCHHHHHHHHHHHHH
Confidence 5 7753 233 58999999999999874 44455555542 3454333211 11 0357889999988774
|
| >1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A* | Back alignment and structure |
|---|
Probab=91.71 E-value=1.6 Score=36.61 Aligned_cols=98 Identities=10% Similarity=0.138 Sum_probs=63.8
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcc-----hHHHHHhhhhhccCCCCCeEEEEcCCCCCCCcCCC
Q 012212 4 QPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFI-----HKKIIASLQEKAEDSSSQIKLVTIPDGLELQAADR 78 (468)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~-----~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 78 (468)
+..|++++..+.|-..-.+++|...+.+|++|.|+..-.. ...+.+. -++.+.....++....
T Consensus 28 ~g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF~Kg~~~~gE~~~l~~---------L~v~~~~~g~gf~~~~--- 95 (196)
T 1g5t_A 28 RGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFIKGTWPNGERNLLEP---------HGVEFQVMATGFTWET--- 95 (196)
T ss_dssp CCCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEESSCCSSCCHHHHHHGG---------GTCEEEECCTTCCCCG---
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEeeCCCCCccHHHHHHh---------CCcEEEEcccccccCC---
Confidence 3578899999999999999999999999999999965442 1112211 2378887776554321
Q ss_pred CCHHHHHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCc
Q 012212 79 EDPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTV 121 (468)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~ 121 (468)
.+.. + -.......+..+.+.+.+ .++|+||.|-+.
T Consensus 96 ~~~~---~-~~~~a~~~l~~a~~~l~~----~~yDlvILDEi~ 130 (196)
T 1g5t_A 96 QNRE---A-DTAACMAVWQHGKRMLAD----PLLDMVVLDELT 130 (196)
T ss_dssp GGHH---H-HHHHHHHHHHHHHHHTTC----TTCSEEEEETHH
T ss_pred CCcH---H-HHHHHHHHHHHHHHHHhc----CCCCEEEEeCCC
Confidence 1111 1 122234445555555544 569999999763
|
| >3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0 | Back alignment and structure |
|---|
Probab=91.55 E-value=0.39 Score=42.11 Aligned_cols=113 Identities=19% Similarity=0.148 Sum_probs=64.2
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCCCCCCCcCCCCCHH
Q 012212 3 RQPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDGLELQAADREDPL 82 (468)
Q Consensus 3 ~~~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 82 (468)
++||||+.-==|. |---+..|+++|.+ +|+|+++.+...+....... ....++++....++.-. ....+.
T Consensus 10 ~~m~ILlTNDDGi-~apGi~aL~~~l~~-~~~V~VVAP~~~~Sg~g~si-----Tl~~pl~~~~~~~~~~~---v~GTPa 79 (261)
T 3ty2_A 10 PKLRLLLSNDDGV-YAKGLAILAKTLAD-LGEVDVVAPDRNRSGASNSL-----TLNAPLHIKNLENGMIS---VEGTPT 79 (261)
T ss_dssp -CCEEEEECSSCT-TCHHHHHHHHHHTT-TSEEEEEEESSCCTTCTTCC-----CCSSCEEEEECTTSCEE---ESSCHH
T ss_pred CCCeEEEEcCCCC-CCHHHHHHHHHHHh-cCCEEEEecCCCCcCcccce-----ecCCCeEEEEecCCeEE---ECCCHH
Confidence 5689988863333 44557888999977 89999999987665443321 22245666654432100 111222
Q ss_pred HHHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEec----------CCcccHHHHH---HHhCCceEEEcc
Q 012212 83 KLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIAD----------VTVGSALEVA---ESMGIARAAVVP 140 (468)
Q Consensus 83 ~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D----------~~~~~~~~~A---~~lgiP~v~~~~ 140 (468)
+..... +..+.. .+|||||+- .+++++..+| ..+|||.|.++.
T Consensus 80 DCV~la-----------l~~l~~----~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 135 (261)
T 3ty2_A 80 DCVHLA-----------ITGVLP----EMPDMVVAGINAGPNLGDDVWYSGTVAAAMEGRFLGLPALAVSL 135 (261)
T ss_dssp HHHHHH-----------TTTTSS----SCCSEEEEEEEESCCCGGGGGTCHHHHHC-CCSTTSCCEEEEEE
T ss_pred HHHHHH-----------HHHhcC----CCCCEEEECCcCCCCCCCCcCCchHHHHHHHHHHcCCCeEEEEc
Confidence 221111 122221 469999974 3344444444 556999999874
|
| >2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=91.36 E-value=0.54 Score=41.29 Aligned_cols=113 Identities=17% Similarity=0.154 Sum_probs=61.7
Q ss_pred CCEEEEEcCCCccChH-HHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCCCCCCCcCCCCCHH
Q 012212 4 QPHVLVIPYPAQGHVA-PLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDGLELQAADREDPL 82 (468)
Q Consensus 4 ~~~Il~~~~~~~GH~~-p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 82 (468)
|+|||+.- -.|--. -+..|+++|.+.| +|+++.+...+-.+.... ....++++.......... ....+.
T Consensus 1 Mp~ILlTN--DDGi~apGi~~L~~~l~~~g-~V~VvAP~~~~Sg~g~si-----T~~~pl~~~~~~~~~~~~--v~GTPa 70 (251)
T 2wqk_A 1 MPTFLLVN--DDGYFSPGINALREALKSLG-RVVVVAPDRNLSGVGHSL-----TFTEPLKMRKIDTDFYTV--IDGTPA 70 (251)
T ss_dssp -CEEEEEC--SSCTTCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCSC-----CCSSCEEEEEEETTEEEE--TTCCHH
T ss_pred CCEEEEEc--CCCCCcHHHHHHHHHHHhCC-CEEEEeeCCCCcccccCc-----CCCCCceeEEeeccceee--cCCChH
Confidence 56888875 333333 4778899999998 599888876654443221 222455655543221100 112222
Q ss_pred HHHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEe----------cCCcccHH---HHHHHhCCceEEEcc
Q 012212 83 KLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIA----------DVTVGSAL---EVAESMGIARAAVVP 140 (468)
Q Consensus 83 ~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~----------D~~~~~~~---~~A~~lgiP~v~~~~ 140 (468)
+.... -+..+.. ..+|||||+ |.+.+++. .=|..+|||.|.++.
T Consensus 71 DCV~l-----------al~~~l~---~~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S~ 127 (251)
T 2wqk_A 71 DCVHL-----------GYRVILE---EKKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSA 127 (251)
T ss_dssp HHHHH-----------HHHTTTT---TCCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHhh-----------hhhhhcC---CCCCCEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEEc
Confidence 22211 1122111 157999998 54555333 445678999999873
|
| >3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0 | Back alignment and structure |
|---|
Probab=91.00 E-value=0.35 Score=41.11 Aligned_cols=48 Identities=13% Similarity=0.097 Sum_probs=41.6
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHH
Q 012212 1 MSRQPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIA 49 (468)
Q Consensus 1 m~~~~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~ 49 (468)
|.+++||++--.++.|-++ ...|.+.|.++|++|.++.++.....+..
T Consensus 1 m~~~k~IllgvTGaiaa~k-~~~ll~~L~~~g~eV~vv~T~~A~~fi~~ 48 (209)
T 3zqu_A 1 MSGPERITLAMTGASGAQY-GLRLLDCLVQEEREVHFLISKAAQLVMAT 48 (209)
T ss_dssp CCSCSEEEEEECSSSCHHH-HHHHHHHHHHTTCEEEEEECHHHHHHHHH
T ss_pred CCCCCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEECccHHHHHHH
Confidence 8888999988888877777 88999999999999999999887777654
|
| >4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A* | Back alignment and structure |
|---|
Probab=89.93 E-value=2.9 Score=35.07 Aligned_cols=83 Identities=16% Similarity=0.097 Sum_probs=53.0
Q ss_pred EEEEE-cCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCCCCCCCcCCCCCHHHH
Q 012212 6 HVLVI-PYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDGLELQAADREDPLKL 84 (468)
Q Consensus 6 ~Il~~-~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 84 (468)
.|.|. +-+|.|-..-...||..|+++|++|.++-.+.......-.+ ....++.+...+.
T Consensus 3 vi~v~s~kgG~GKTt~a~~la~~la~~g~~vlliD~D~~~~~~~~~~-----~~~~~~~~~~~~~--------------- 62 (206)
T 4dzz_A 3 VISFLNPKGGSGKTTAVINIATALSRSGYNIAVVDTDPQMSLTNWSK-----AGKAAFDVFTAAS--------------- 62 (206)
T ss_dssp EEEECCSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHT-----TSCCSSEEEECCS---------------
T ss_pred EEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEECCCCCCHHHHHh-----cCCCCCcEEecCc---------------
Confidence 34454 44567999999999999999999999998875443332222 1123333333221
Q ss_pred HHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCcc
Q 012212 85 GESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVG 122 (468)
Q Consensus 85 ~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~ 122 (468)
..+.++++.+. ..+|+||+|.-..
T Consensus 63 ---------~~l~~~l~~l~-----~~yD~viiD~~~~ 86 (206)
T 4dzz_A 63 ---------EKDVYGIRKDL-----ADYDFAIVDGAGS 86 (206)
T ss_dssp ---------HHHHHTHHHHT-----TTSSEEEEECCSS
T ss_pred ---------HHHHHHHHHhc-----CCCCEEEEECCCC
Confidence 33556666665 3499999997544
|
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* | Back alignment and structure |
|---|
Probab=89.30 E-value=2 Score=41.87 Aligned_cols=107 Identities=17% Similarity=0.080 Sum_probs=68.9
Q ss_pred ceE-EcccChHH---HhcCCCCCceee---ccCc-hhHHHhhhcCC-----ceeccccccchhhhHHHHHHHhhceeEee
Q 012212 334 GKI-VEWAPQEK---VLGHSSVACFIS---HCGW-NSTMEGLSMGV-----PFLCWPYFSDQYQNRNYICEAWKIGLQFF 400 (468)
Q Consensus 334 v~~-~~~~p~~~---ll~~~~~~~~I~---hGG~-~s~~eal~~Gv-----P~v~~P~~~DQ~~na~rv~~~lG~g~~l~ 400 (468)
+++ .+++|+.+ ++..+++ ||. .=|+ .++.||+++|+ |+|+.-+.+ .+..+ .-|+.++
T Consensus 333 v~~~~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G----~~~~l----~~g~lv~ 402 (482)
T 1uqt_A 333 LYYLNQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAG----AANEL----TSALIVN 402 (482)
T ss_dssp EEEECSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBG----GGGTC----TTSEEEC
T ss_pred EEEeCCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCC----CHHHh----CCeEEEC
Confidence 554 48888865 5555555 765 3355 48999999998 666654322 11111 2356666
Q ss_pred ccCCCccCHHHHHHHHHHHhcCh-H-HHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhh
Q 012212 401 ADENGIITRQEIQRKVLTLLKND-D-IRSNSLKLKEVARKSLLGGGSSFRNFESFISDIKML 460 (468)
Q Consensus 401 ~~~~~~~t~~~l~~ai~~~l~~~-~-~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 460 (468)
. .+.++++++|.++|+++ + -+++.++..+..+.. +.....+++++.+++.
T Consensus 403 p-----~d~~~lA~ai~~lL~~~~~~r~~~~~~~~~~v~~~-----s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 403 P-----YDRDEVAAALDRALTMSLAERISRHAEMLDVIVKN-----DINHWQECFISDLKQI 454 (482)
T ss_dssp T-----TCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHT-----CHHHHHHHHHHHHHHS
T ss_pred C-----CCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhC-----CHHHHHHHHHHHHHhc
Confidence 5 46899999999999854 3 344444555555442 5677888888888765
|
| >3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A | Back alignment and structure |
|---|
Probab=89.23 E-value=0.65 Score=40.65 Aligned_cols=38 Identities=21% Similarity=0.182 Sum_probs=30.4
Q ss_pred CCCCEEEEEcCC--CccChHHHHHHHHHHHHCCCEEEEEE
Q 012212 2 SRQPHVLVIPYP--AQGHVAPLMKLATKIAERAIKVTVVN 39 (468)
Q Consensus 2 ~~~~~Il~~~~~--~~GH~~p~~~LA~~L~~rGH~Vt~~~ 39 (468)
++|++.+|++.. +.|=..-...|++.|.++|++|.++-
T Consensus 18 ~~m~k~i~ItgT~t~vGKT~vs~gL~~~L~~~G~~V~~fK 57 (242)
T 3qxc_A 18 YFQGHMLFISATNTNAGKTTCARLLAQYCNACGVKTILLK 57 (242)
T ss_dssp -CCCEEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred hhcCcEEEEEeCCCCCcHHHHHHHHHHHHHhCCCceEEEe
Confidence 356677766444 44899999999999999999999985
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* | Back alignment and structure |
|---|
Probab=88.91 E-value=2.6 Score=42.55 Aligned_cols=45 Identities=18% Similarity=0.154 Sum_probs=31.3
Q ss_pred CCceE--E-cccCh---------HHHhcCCCCCceeecc---C-chhHHHhhhcCCceecccc
Q 012212 332 NRGKI--V-EWAPQ---------EKVLGHSSVACFISHC---G-WNSTMEGLSMGVPFLCWPY 378 (468)
Q Consensus 332 ~nv~~--~-~~~p~---------~~ll~~~~~~~~I~hG---G-~~s~~eal~~GvP~v~~P~ 378 (468)
++|++ + .|++. .++++.+++ ||.-. | ..+++||+++|+|+|+.-.
T Consensus 490 drVKVIf~P~~L~~~d~lf~~d~~~~~~~adv--fV~PS~~EgfGl~~LEAmA~G~PvI~s~~ 550 (725)
T 3nb0_A 490 DRVKMIFHPEFLNANNPILGLDYDEFVRGCHL--GVFPSYYEPWGYTPAECTVMGVPSITTNV 550 (725)
T ss_dssp CSEEEEECCSCCCTTCSSSCCCHHHHHHHCSE--EECCCSSBSSCHHHHHHHHTTCCEEEETT
T ss_pred CceeEEEeccccCCCCccchhHHHHHHhhceE--EEeccccCCCCHHHHHHHHcCCCEEEeCC
Confidence 44554 3 78765 457766666 76432 3 3689999999999998744
|
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A* | Back alignment and structure |
|---|
Probab=87.39 E-value=1.9 Score=41.98 Aligned_cols=109 Identities=10% Similarity=-0.014 Sum_probs=71.7
Q ss_pred CceEEcccChHH---HhcCCCCCceee---ccCch-hHHHhhhcC---CceeccccccchhhhHHHHHHHhh-ceeEeec
Q 012212 333 RGKIVEWAPQEK---VLGHSSVACFIS---HCGWN-STMEGLSMG---VPFLCWPYFSDQYQNRNYICEAWK-IGLQFFA 401 (468)
Q Consensus 333 nv~~~~~~p~~~---ll~~~~~~~~I~---hGG~~-s~~eal~~G---vP~v~~P~~~DQ~~na~rv~~~lG-~g~~l~~ 401 (468)
.|++...+|+.+ ++..+++ |+. .=|+| +..|++++| .|+|+.-+. ..+.. +| -|+.++.
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv--~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~a----Ga~~~----l~~~allVnP 422 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL--LIFNSTVDGQNLSTFEAPLVNERDADVILSETC----GAAEV----LGEYCRSVNP 422 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE--EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTB----TTHHH----HGGGSEEECT
T ss_pred CEEEeCCCCHHHHHHHHHhccE--EEECcccccCChhHHHHHHhCCCCCCEEEeCCC----CCHHH----hCCCEEEECC
Confidence 577778888755 4555655 654 35776 568999996 566554332 22322 33 4788877
Q ss_pred cCCCccCHHHHHHHHHHHhcChH--HHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhhc
Q 012212 402 DENGIITRQEIQRKVLTLLKNDD--IRSNSLKLKEVARKSLLGGGSSFRNFESFISDIKMLI 461 (468)
Q Consensus 402 ~~~~~~t~~~l~~ai~~~l~~~~--~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 461 (468)
.+.++++++|.++|+++. -+++.+++.+...+ -+...-.++|+++|....
T Consensus 423 -----~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~V~~-----~d~~~W~~~fl~~L~~~~ 474 (496)
T 3t5t_A 423 -----FDLVEQAEAISAALAAGPRQRAEAAARRRDAARP-----WTLEAWVQAQLDGLAADH 474 (496)
T ss_dssp -----TBHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTT-----CBHHHHHHHHHHHHHHHH
T ss_pred -----CCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH-----CCHHHHHHHHHHHHhhcc
Confidence 579999999999998754 44455555555444 255677888888887653
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* | Back alignment and structure |
|---|
Probab=87.30 E-value=0.37 Score=46.09 Aligned_cols=40 Identities=13% Similarity=0.238 Sum_probs=30.5
Q ss_pred CCCEEEEEcCCCc-----cChHHHHHHHHHHHHCCCEEEEEECCc
Q 012212 3 RQPHVLVIPYPAQ-----GHVAPLMKLATKIAERAIKVTVVNTQF 42 (468)
Q Consensus 3 ~~~~Il~~~~~~~-----GH~~p~~~LA~~L~~rGH~Vt~~~~~~ 42 (468)
++|||++++.... |=......+|++|+++||+|++++...
T Consensus 45 ~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~GheV~Vvt~~~ 89 (413)
T 2x0d_A 45 KGKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTDA 89 (413)
T ss_dssp CSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCEEEEEESSC
T ss_pred CCceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCceEEEEecC
Confidence 5689987753311 223468899999999999999999864
|
| >3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A* | Back alignment and structure |
|---|
Probab=86.38 E-value=9.7 Score=33.28 Aligned_cols=37 Identities=22% Similarity=0.275 Sum_probs=29.4
Q ss_pred CCCEEEEEcCC--CccChHHHHHHHHHHHHCCCEEEEEE
Q 012212 3 RQPHVLVIPYP--AQGHVAPLMKLATKIAERAIKVTVVN 39 (468)
Q Consensus 3 ~~~~Il~~~~~--~~GH~~p~~~LA~~L~~rGH~Vt~~~ 39 (468)
++|+.+|++.. +.|-..-...|++.|.++|++|.++-
T Consensus 24 ~~m~~i~Itgt~t~vGKT~vt~gL~~~l~~~G~~V~~fK 62 (251)
T 3fgn_A 24 SHMTILVVTGTGTGVGKTVVCAALASAARQAGIDVAVCK 62 (251)
T ss_dssp SSCEEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred cCCCEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEe
Confidence 34566655433 45899999999999999999999986
|
| >1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1 | Back alignment and structure |
|---|
Probab=86.25 E-value=2.7 Score=37.40 Aligned_cols=114 Identities=14% Similarity=0.038 Sum_probs=62.2
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCCCCCCCcCCCCCHHHH
Q 012212 5 PHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDGLELQAADREDPLKL 84 (468)
Q Consensus 5 ~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 84 (468)
||||+.-==|. +---+..|+++|.+.| +|+++.+...+..+.... ....++++..++.+-...-.....+.+.
T Consensus 1 M~ILlTNDDGi-~ApGi~aL~~aL~~~g-~V~VVAP~~~qSg~g~si-----Tl~~pl~~~~~~~~~~~~~~v~GTPaDC 73 (280)
T 1l5x_A 1 MKILVTNDDGV-HSPGLRLLYQFALSLG-DVDVVAPESPKSATGLGI-----TLHKPLRMYEVDLCGFRAIATSGTPSDT 73 (280)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHGGGS-EEEEEEESSCTTTSCSSC-----CCSSCBCEEEEECSSSEEEEESSCHHHH
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccc-----cCCCCeEEEEeccCCCceEEECCcHHHH
Confidence 46776642222 3334788999999988 999999987665443321 2224455555533100000011222222
Q ss_pred HHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEec-----------CCcccHH---HHHHHhCCceEEEccc
Q 012212 85 GESVARAMRGCLRDLIEKINQSNDCEPIRCVIAD-----------VTVGSAL---EVAESMGIARAAVVPF 141 (468)
Q Consensus 85 ~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D-----------~~~~~~~---~~A~~lgiP~v~~~~~ 141 (468)
... -+..+ . .+|||||+- .+.+++. .=|..+|||.|.++..
T Consensus 74 V~l-----------al~~l-~----~~PDLVvSGIN~G~Nlg~d~v~ySGTVgAA~Ea~~~GiPaIA~S~~ 128 (280)
T 1l5x_A 74 VYL-----------ATFGL-G----RKYDIVLSGINLGDNTSLQVILSSGTLGAAFQAALLGIPALAYSAY 128 (280)
T ss_dssp HHH-----------HHHHH-T----SCCSEEEEEEEEBCCCSHHHHTTCHHHHHHHHHHHTTCCEEEEEEC
T ss_pred HHH-----------HHhcC-C----CCCCEEEECCccCCcCCccccccchhHHHHHHHHHcCCCeEEEEcc
Confidence 221 12233 2 469999973 3444333 3446689999999753
|
| >3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* | Back alignment and structure |
|---|
Probab=86.05 E-value=0.66 Score=46.08 Aligned_cols=39 Identities=18% Similarity=0.215 Sum_probs=29.5
Q ss_pred CCCEEEEEcCC------CccChHHHHHHHHHHHHCCCEEEEEECC
Q 012212 3 RQPHVLVIPYP------AQGHVAPLMKLATKIAERAIKVTVVNTQ 41 (468)
Q Consensus 3 ~~~~Il~~~~~------~~GH~~p~~~LA~~L~~rGH~Vt~~~~~ 41 (468)
.+|||||++.- ..|=-.-..+|+++|+++||+|+++++.
T Consensus 8 ~~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P~ 52 (536)
T 3vue_A 8 HHMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPR 52 (536)
T ss_dssp CCCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred CCcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeEEEEecC
Confidence 46999999632 1232335678999999999999999964
|
| >1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A* | Back alignment and structure |
|---|
Probab=85.91 E-value=2.7 Score=36.58 Aligned_cols=114 Identities=11% Similarity=0.088 Sum_probs=61.7
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCCCCC-CCcCCCCCHHH
Q 012212 5 PHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDGLE-LQAADREDPLK 83 (468)
Q Consensus 5 ~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~ 83 (468)
||||+.-==|. |---+..|+++|.+.| +|+++.+...+..+.... ....++++..++.+-. ..-.....+.+
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~si-----Tl~~pl~~~~~~~~~~~~~~~v~GTPaD 73 (247)
T 1j9j_A 1 MRILVTNDDGI-QSKGIIVLAELLSEEH-EVFVVAPDKERSATGHSI-----TIHVPLWMKKVFISERVVAYSTTGTPAD 73 (247)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTCTTCC-----CCSSCCCEEECCCSSSEEEEEESSCHHH
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccc-----cCCCCeEEEEeccCCCCceEEECCcHHH
Confidence 46776642222 3334788999999888 899999987665543322 2224556665543200 00001112222
Q ss_pred HHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEec----------CCcccHH---HHHHHhCCceEEEcc
Q 012212 84 LGESVARAMRGCLRDLIEKINQSNDCEPIRCVIAD----------VTVGSAL---EVAESMGIARAAVVP 140 (468)
Q Consensus 84 ~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D----------~~~~~~~---~~A~~lgiP~v~~~~ 140 (468)
.... -+..+.. .+|||||+- .+++++. .=|..+|||.|.++.
T Consensus 74 CV~l-----------al~~l~~----~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 128 (247)
T 1j9j_A 74 CVKL-----------AYNVVMD----KRVDLIVSGVNRGPNMGMDILHSGTVSGAMEGAMMNIPSIAISS 128 (247)
T ss_dssp HHHH-----------HHHTTST----TCCSEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHH-----------HHHhhcc----CCCCEEEECCccCCCCCcCeecchhHHHHHHHHhcCCCeEEEec
Confidence 2211 1222222 469999973 3344333 445678999999864
|
| >3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP} | Back alignment and structure |
|---|
Probab=85.77 E-value=1.8 Score=40.49 Aligned_cols=41 Identities=10% Similarity=0.003 Sum_probs=32.7
Q ss_pred CCEEEEEcC-CCccChHHHHHHHHHHHHCCCEEEEEECCcchH
Q 012212 4 QPHVLVIPY-PAQGHVAPLMKLATKIAERAIKVTVVNTQFIHK 45 (468)
Q Consensus 4 ~~~Il~~~~-~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~ 45 (468)
|++|+|++. +|.|-..-...||..|+++|++|.++.. +...
T Consensus 1 M~~i~~~~gkGG~GKTt~a~~la~~la~~g~~vllvd~-~~~~ 42 (374)
T 3igf_A 1 MALILTFLGKSGVARTKIAIAAAKLLASQGKRVLLAGL-AEPV 42 (374)
T ss_dssp -CEEEEEECSBHHHHHHHHHHHHHHHHHTTCCEEEEEC-SCSH
T ss_pred CcEEEEEeCCCCCcHHHHHHHHHHHHHHCCCCeEEEeC-CCCC
Confidence 467776654 4559999999999999999999999998 5433
|
| >3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=85.34 E-value=5.5 Score=36.27 Aligned_cols=37 Identities=16% Similarity=0.150 Sum_probs=25.1
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCc
Q 012212 1 MSRQPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQF 42 (468)
Q Consensus 1 m~~~~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~ 42 (468)
||++|||+|+..+.. .....++|.++||+|..+.+.+
T Consensus 4 m~~~mrivf~Gt~~f-----a~~~L~~L~~~~~~v~~Vvt~p 40 (318)
T 3q0i_A 4 MSQSLRIVFAGTPDF-----AARHLAALLSSEHEIIAVYTQP 40 (318)
T ss_dssp ---CCEEEEECCSHH-----HHHHHHHHHTSSSEEEEEECCC
T ss_pred cccCCEEEEEecCHH-----HHHHHHHHHHCCCcEEEEEcCC
Confidence 777899999965532 3455688888999998776643
|
| >2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A | Back alignment and structure |
|---|
Probab=84.13 E-value=5.4 Score=34.63 Aligned_cols=112 Identities=14% Similarity=0.103 Sum_probs=62.9
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCCCCC----CCcCCCCC
Q 012212 5 PHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDGLE----LQAADRED 80 (468)
Q Consensus 5 ~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~----~~~~~~~~ 80 (468)
||||+.-==|. |---+..|+++|.+.| +|+++.+...+..+.... ....++++..++.+.. ..-.....
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~si-----Tl~~pl~~~~~~~~~~~~~~~~~~v~GT 73 (244)
T 2e6c_A 1 MRILVTNDDGI-YSPGLWALAEAASQFG-EVFVAAPDTEQSAAGHAI-----TIAHPVRAYPHPSPLHAPHFPAYRVRGT 73 (244)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEECSSCCCCCSSC-----CCSSCBEEEECCCCTTSCCCCEEEEESC
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccc-----cCCCCeEEEEeccCcCCCCCceEEEcCc
Confidence 46776642222 3334788999999888 899999987654443321 2235677777754210 00001122
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEec----------CCcccHH---HHHHHhCCceEEEcc
Q 012212 81 PLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIAD----------VTVGSAL---EVAESMGIARAAVVP 140 (468)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D----------~~~~~~~---~~A~~lgiP~v~~~~ 140 (468)
+.+.....+ . +. .+|||||+- .+++++. .=|..+|||.|.++.
T Consensus 74 PaDCV~lal-----------~-l~-----~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 129 (244)
T 2e6c_A 74 PADCVALGL-----------H-LF-----GPVDLVLSGVNLGSNLGHEIWHSGTVAAAKQGYLFGLSAAAFSV 129 (244)
T ss_dssp HHHHHHHHH-----------H-HS-----CSCCEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHH-----------c-CC-----CCCCEEEECCccCCCCCcCeechHhHHHHHHHHhcCCCeEEEec
Confidence 222222221 1 21 579999973 3344333 445678999999864
|
| >2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A | Back alignment and structure |
|---|
Probab=83.16 E-value=12 Score=30.58 Aligned_cols=77 Identities=14% Similarity=0.116 Sum_probs=43.3
Q ss_pred eEEcccCh-HHHh-cCCCCCceeeccCchhHHH---hhhcCCceeccccccchhhhHHHHHHHhhceeEeeccCCCccCH
Q 012212 335 KIVEWAPQ-EKVL-GHSSVACFISHCGWNSTME---GLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGIITR 409 (468)
Q Consensus 335 ~~~~~~p~-~~ll-~~~~~~~~I~hGG~~s~~e---al~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~~~~~~t~ 409 (468)
.+++..+. ..++ ..++ ..++--||.||+-| ++.+++|++++|.+. .....+... -.....-. -++
T Consensus 92 i~~~~~~~Rk~~m~~~sd-a~IvlpGg~GTL~E~~~al~~~kpV~~l~~~~---~~~gfi~~~-~~~~i~~~-----~~~ 161 (176)
T 2iz6_A 92 IVTGLGSARDNINALSSN-VLVAVGMGPGTAAEVALALKAKKPVVLLGTQP---EAEKFFTSL-DAGLVHVA-----ADV 161 (176)
T ss_dssp EECCCCSSSCCCCGGGCS-EEEEESCCHHHHHHHHHHHHTTCCEEEESCCH---HHHHHHHHH-CTTTEEEE-----SSH
T ss_pred EEcCCHHHHHHHHHHhCC-EEEEecCCccHHHHHHHHHHhCCcEEEEcCcc---cccccCChh-hcCeEEEc-----CCH
Confidence 44566665 3333 3333 34666788887655 577999999999832 111122221 22222222 357
Q ss_pred HHHHHHHHHHhc
Q 012212 410 QEIQRKVLTLLK 421 (468)
Q Consensus 410 ~~l~~ai~~~l~ 421 (468)
+++.+.+.+.++
T Consensus 162 ~e~~~~l~~~~~ 173 (176)
T 2iz6_A 162 AGAIAAVKQLLA 173 (176)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 777777776654
|
| >1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A* | Back alignment and structure |
|---|
Probab=82.97 E-value=2.4 Score=33.27 Aligned_cols=47 Identities=9% Similarity=0.057 Sum_probs=39.2
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHh
Q 012212 4 QPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIAS 50 (468)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~ 50 (468)
+.||++.+.++..|-....-++..|..+|++|..+......+.+.+.
T Consensus 3 ~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~~~p~e~~v~~ 49 (137)
T 1ccw_A 3 KKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVLSPQELFIKA 49 (137)
T ss_dssp CCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEEECHHHHHHH
T ss_pred CCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHH
Confidence 46899999999999999999999999999999988776555544443
|
| >2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A | Back alignment and structure |
|---|
Probab=82.14 E-value=4.8 Score=35.20 Aligned_cols=111 Identities=21% Similarity=0.189 Sum_probs=62.1
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCCCCCCCcCCC-CCHHH
Q 012212 5 PHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDGLELQAADR-EDPLK 83 (468)
Q Consensus 5 ~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~ 83 (468)
||||+.-==|. |---+..|+++|.+.| +|+++.+...+..+.... ....++++..+.... .. .. ..+.+
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~L~~~g-~V~VVAP~~~~Sg~g~ai-----Tl~~Pl~~~~~~~~~--~~-v~~GTPaD 71 (254)
T 2v4n_A 2 MRILLSNDDGV-HAPGIQTLAKALREFA-DVQVVAPDRNRSGASNSL-----TLESSLRTFTFDNGD--IA-VQMGTPTD 71 (254)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTCTTCC-----CCSSCCEEEECTTSC--EE-EETCCHHH
T ss_pred CeEEEEcCCCC-CCHHHHHHHHHHHhCC-cEEEEeeCCCCcCccCCc-----CCCCCeEEEEeCCCC--eE-ECCCCHHH
Confidence 67877753333 3344788999998876 999999987665543322 222455665552110 00 11 22332
Q ss_pred HHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEe----------cCCcccHHHHH---HHhCCceEEEcc
Q 012212 84 LGESVARAMRGCLRDLIEKINQSNDCEPIRCVIA----------DVTVGSALEVA---ESMGIARAAVVP 140 (468)
Q Consensus 84 ~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~----------D~~~~~~~~~A---~~lgiP~v~~~~ 140 (468)
..... +..+.. .+|||||+ |.+++++..+| ..+|||.|.++.
T Consensus 72 CV~la-----------l~~ll~----~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 126 (254)
T 2v4n_A 72 CVYLG-----------VNALMR----PRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSL 126 (254)
T ss_dssp HHHHH-----------HHTTSS----SCCSEEEEEEEESCCCGGGGGGCHHHHHHHTTTTSSSCEEEEEE
T ss_pred HHHHH-----------HhhccC----CCCCEeeeCCcCCCCCCCCeeccHHHHHHHHHHhcCCCeEEEec
Confidence 22221 222222 46999997 34444444444 457999999864
|
| >2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A | Back alignment and structure |
|---|
Probab=81.79 E-value=8.6 Score=34.28 Aligned_cols=39 Identities=21% Similarity=0.314 Sum_probs=31.5
Q ss_pred CCEEEEEc--CCCccChHHHHHHHHHHHHCCCEEEEEECCc
Q 012212 4 QPHVLVIP--YPAQGHVAPLMKLATKIAERAIKVTVVNTQF 42 (468)
Q Consensus 4 ~~~Il~~~--~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~ 42 (468)
|+|++.+. -++.|-..-...||..|+++|++|.++=.+.
T Consensus 3 M~kvI~v~s~KGGvGKTT~a~nLA~~La~~G~~VlliD~D~ 43 (286)
T 2xj4_A 3 ETRVIVVGNEKGGAGKSTIAVHLVTALLYGGAKVAVIDLDL 43 (286)
T ss_dssp -CEEEEECCSSSCTTHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCcEEEEECCC
Confidence 56666553 3567999999999999999999999987776
|
| >2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824} | Back alignment and structure |
|---|
Probab=81.23 E-value=13 Score=30.98 Aligned_cols=44 Identities=20% Similarity=0.256 Sum_probs=35.1
Q ss_pred HHHHHHHHHHhhCCCCCCceEEEecCCcccHHHHHHHhCCceEEEcccchH
Q 012212 94 GCLRDLIEKINQSNDCEPIRCVIADVTVGSALEVAESMGIARAAVVPFGPG 144 (468)
Q Consensus 94 ~~~~~ll~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~lgiP~v~~~~~~~~ 144 (468)
...+..++.+++.+ +|+||.|.. +..+|+.+|+|.+.+.++..+
T Consensus 129 ~e~~~~i~~l~~~G----~~vvVG~~~---~~~~A~~~Gl~~vli~sg~eS 172 (196)
T 2q5c_A 129 DEITTLISKVKTEN----IKIVVSGKT---VTDEAIKQGLYGETINSGEES 172 (196)
T ss_dssp GGHHHHHHHHHHTT----CCEEEECHH---HHHHHHHTTCEEEECCCCHHH
T ss_pred HHHHHHHHHHHHCC----CeEEECCHH---HHHHHHHcCCcEEEEecCHHH
Confidence 45677888888854 999999944 688999999999998875443
|
| >2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=80.95 E-value=19 Score=30.59 Aligned_cols=35 Identities=11% Similarity=0.131 Sum_probs=24.1
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHHCCC--EEEEEECC
Q 012212 4 QPHVLVIPYPAQGHVAPLMKLATKIAERAI--KVTVVNTQ 41 (468)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~~~LA~~L~~rGH--~Vt~~~~~ 41 (468)
|+||+|+.++.. .-+.++.++|.+.+| +|..+.+.
T Consensus 1 m~rI~vl~SG~g---~~~~~~l~~l~~~~~~~~i~~Vvs~ 37 (216)
T 2ywr_A 1 MLKIGVLVSGRG---SNLQAIIDAIESGKVNASIELVISD 37 (216)
T ss_dssp CEEEEEEECSCC---HHHHHHHHHHHTTSSCEEEEEEEES
T ss_pred CCEEEEEEeCCc---HHHHHHHHHHHhCCCCCeEEEEEeC
Confidence 468988865543 347788888988888 77655544
|
| >3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A* | Back alignment and structure |
|---|
Probab=80.83 E-value=8.7 Score=35.24 Aligned_cols=46 Identities=17% Similarity=0.120 Sum_probs=36.2
Q ss_pred CCEEEEE-cCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHH
Q 012212 4 QPHVLVI-PYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIA 49 (468)
Q Consensus 4 ~~~Il~~-~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~ 49 (468)
+++|+|+ .-+|.|-..-...||..|+++|++|.++..+........
T Consensus 15 ~~~i~~~sgkGGvGKTt~a~~lA~~la~~g~~vllid~D~~~~l~~~ 61 (334)
T 3iqw_A 15 SLRWIFVGGKGGVGKTTTSCSLAIQLAKVRRSVLLLSTDPAHNLSDA 61 (334)
T ss_dssp TCCEEEEECSTTSSHHHHHHHHHHHHTTSSSCEEEEECCSSCHHHHH
T ss_pred CeEEEEEeCCCCccHHHHHHHHHHHHHhCCCcEEEEECCCCCChhHH
Confidence 4567655 455679999999999999999999999999865543333
|
| >3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=80.07 E-value=15 Score=35.17 Aligned_cols=41 Identities=24% Similarity=0.313 Sum_probs=35.3
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchH
Q 012212 5 PHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHK 45 (468)
Q Consensus 5 ~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~ 45 (468)
..|+++..++.|-..-...||..|+++|++|.+++.+.++.
T Consensus 101 ~vIlivG~~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~R~ 141 (443)
T 3dm5_A 101 TILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRP 141 (443)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCCSST
T ss_pred eEEEEECcCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcch
Confidence 34567777788999999999999999999999999887754
|
| >4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=80.04 E-value=6.9 Score=36.90 Aligned_cols=37 Identities=14% Similarity=0.067 Sum_probs=28.0
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCc
Q 012212 1 MSRQPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQF 42 (468)
Q Consensus 1 m~~~~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~ 42 (468)
|++++|||++..+.. -..+++++.+.|++|++++.+.
T Consensus 4 m~~~~~ilI~g~g~~-----~~~~~~a~~~~G~~~v~v~~~~ 40 (403)
T 4dim_A 4 MYDNKRLLILGAGRG-----QLGLYKAAKELGIHTIAGTMPN 40 (403)
T ss_dssp --CCCEEEEECCCGG-----GHHHHHHHHHHTCEEEEEECSS
T ss_pred ccCCCEEEEECCcHh-----HHHHHHHHHHCCCEEEEEcCCC
Confidence 777889999966643 3568999999999999997643
|
| >1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1 | Back alignment and structure |
|---|
Probab=80.01 E-value=3.4 Score=32.41 Aligned_cols=48 Identities=15% Similarity=0.234 Sum_probs=35.3
Q ss_pred CCCEEE-EEcCCCc-cChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHh
Q 012212 3 RQPHVL-VIPYPAQ-GHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIAS 50 (468)
Q Consensus 3 ~~~~Il-~~~~~~~-GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~ 50 (468)
..||+| ++..|-. ..+--.+=++..|.++||+|++++++.....++.+
T Consensus 5 ~~m~~LilLGCPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~npAAlkLleva 54 (157)
T 1kjn_A 5 STGKALMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTANPAALRLVQVA 54 (157)
T ss_dssp -CCEEEEECCCSCSTTHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHH
T ss_pred cceeeeEEecCCCCcchhhHHHHHHHHHHhcCCeeEEecCHHHHhheecc
Confidence 357776 4455555 44444677899999999999999999887777764
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 468 | ||||
| d2pq6a1 | 473 | c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransfe | 6e-87 | |
| d2vcha1 | 471 | c.87.1.10 (A:6-476) Hydroquinone glucosyltransfera | 6e-80 | |
| d2acva1 | 461 | c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transf | 3e-79 | |
| d2c1xa1 | 450 | c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-gluc | 1e-78 | |
| d1rrva_ | 401 | c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Am | 3e-33 | |
| d1iira_ | 401 | c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycol | 3e-32 | |
| d1pn3a_ | 391 | c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA | 1e-24 |
| >d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]} Length = 473 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: (Iso)flavonoid glycosyltransferase species: Medicago truncatula [TaxId: 3880]
Score = 272 bits (695), Expect = 6e-87
Identities = 156/475 (32%), Positives = 243/475 (51%), Gaps = 24/475 (5%)
Query: 5 PHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKL 64
PHV++IPYP QGH+ PL KLA + R +T VNT++ HK+++ S KA D +
Sbjct: 2 PHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNF 61
Query: 65 VTIPDGLELQAAD---REDPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTV 121
+IPDGL D +D L +SV + +L+ ++N S + P+ C+++D +
Sbjct: 62 ESIPDGLTPMEGDGDVSQDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCM 121
Query: 122 GSALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGIIDPNGFAIL-NDGLISLSDEI 180
++ AE + SL + F +E GII + L N L + D I
Sbjct: 122 SFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVERGIIPFKDESYLTNGCLETKVDWI 181
Query: 181 PA--WKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACDLI--- 235
P R + F + I+L V V I+ N+ EL+S + +
Sbjct: 182 PGLKNFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESDVINALSST 241
Query: 236 -PNILPIGPLLAS-------NHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVL 287
P+I PIGPL + + LD N W ED+ CL WL+ + SVVYV FGS V+
Sbjct: 242 IPSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVM 301
Query: 288 SQQQFAELALGLESLQKPFLWVIRQDFMNGSRAKFPDGFIERVSNRGKIVEWAPQEKVLG 347
+ +Q E A GL + +K FLW+IR D + G F F +++RG I W PQ+KVL
Sbjct: 302 TPEQLLEFAWGLANCKKSFLWIIRPDLVIGGSVIFSSEFTNEIADRGLIASWCPQDKVLN 361
Query: 348 HSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGII 407
H S+ F++HCGWNST E + GVP LCWP+F+DQ + +IC W+IG++ + +
Sbjct: 362 HPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEI----DTNV 417
Query: 408 TRQEIQRKVLTLLKNDD---IRSNSLKLKEVARKSLLGGGSSFRNFESFISDIKM 459
R+E+ + + ++ D ++ +++LK+ A ++ GG S+ N I D+ +
Sbjct: 418 KREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKVIKDVLL 472
|
| >d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 471 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Hydroquinone glucosyltransferase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 253 bits (647), Expect = 6e-80
Identities = 117/474 (24%), Positives = 192/474 (40%), Gaps = 32/474 (6%)
Query: 5 PHVLVIPYPAQGHVAPLMKLATKIAE-RAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIK 63
PHV +IP P GH+ PL++ A ++ + VT V + S I
Sbjct: 2 PHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRT--VLDSLPSSIS 59
Query: 64 LVTIPDGLELQAADREDPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVGS 123
V +P + LR + + + ++ D+
Sbjct: 60 SVFLPPVDLTDLSSSTRIESRISLTVTRSNPELRKVFDSFVEG--GRLPTALVVDLFGTD 117
Query: 124 ALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGIIDPNGFAILNDGLISLSDEIPAW 183
A +VA + P L+ L PKL E + + +P
Sbjct: 118 AFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSCEFREL--------TEPLMLPGC 169
Query: 184 KRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACDLIPNILPIGP 243
+ + + K + I+ N+ +EL+ A + P
Sbjct: 170 VPVAGKDFLDPAQDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPGLDKP 229
Query: 244 ---LLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALGLE 300
+ + +E+S CL WLD Q + SV+YV+FGS L+ +Q ELALGL
Sbjct: 230 PVYPVGPLVNIGKQEAKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLA 289
Query: 301 SLQKPFLWVIRQDFMNGSRAKF------------PDGFIERVSNRGKI-VEWAPQEKVLG 347
++ FLWVIR + + F P GF+ER RG + WAPQ +VL
Sbjct: 290 DSEQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLA 349
Query: 348 HSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGII 407
H S F++HCGWNST+E + G+P + WP +++Q N + E + L+ A ++G++
Sbjct: 350 HPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDGLV 409
Query: 408 TRQEIQRKVLTLLKNDD---IRSNSLKLKEVARKSLLGGGSSFRNFESFISDIK 458
R+E+ R V L++ ++ +R+ +LKE A + L G+S + K
Sbjct: 410 RREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVALKWK 463
|
| >d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]} Length = 461 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Triterpene UDP-glucosyl transferase UGT71G1 species: Medicago truncatula [TaxId: 3880]
Score = 251 bits (642), Expect = 3e-79
Identities = 107/467 (22%), Positives = 197/467 (42%), Gaps = 19/467 (4%)
Query: 1 MSRQPHVLVIPYPAQGHVAPLMKLATKIAERA--IKVTVVNTQFIHKKIIASLQEKAEDS 58
+++ ++ IP P GH+A ++ A + + +TV +F S + S
Sbjct: 4 INKNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLAS 63
Query: 59 SSQIKLVTIPDGLELQAADREDPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIAD 118
QI+L+ +P+ + P + ++ ++ I+ I + + ++ D
Sbjct: 64 QPQIQLIDLPEVEPPPQELLKSPEFYILTFLESLIPHVKATIKTILSN----KVVGLVLD 119
Query: 119 VTVGSALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGIIDPNGFAILNDGLISLSD 178
S ++V GI + G L+L L + D + + +S+
Sbjct: 120 FFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIEEVFDDSDRDHQLLNIPGISN 179
Query: 179 EIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACDLIPNI 238
++P+ + ++ L + + + S + + IP I
Sbjct: 180 QVPSNVLPDACFNKDGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDHDEKIPPI 239
Query: 239 LPIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVA-FGSVAVLSQQQFAELAL 297
+GPLL ++ L WLDEQ +SVV++ Q E+AL
Sbjct: 240 YAVGPLLDLK-GQPNPKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIAL 298
Query: 298 GLESLQKPFLWVIRQDFMNGSRAKFPDGFIERVSNRGK--IVEWAPQEKVLGHSSVACFI 355
GL+ FLW + FP+GF+E + GK I WAPQ +VL H ++ F+
Sbjct: 299 GLKHSGVRFLWSNSAEK-----KVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFV 353
Query: 356 SHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQF---FADENGIITRQEI 412
SHCGWNS +E + GVP L WP +++Q N + + W +GL + + ++ +EI
Sbjct: 354 SHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRKGSDVVAAEEI 413
Query: 413 QRKVLTLLKND-DIRSNSLKLKEVARKSLLGGGSSFRNFESFISDIK 458
++ + L+ D + ++KE++R +++ GGSS + I DI
Sbjct: 414 EKGLKDLMDKDSIVHKKVQEMKEMSRNAVVDGGSSLISVGKLIDDIT 460
|
| >d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]} Length = 450 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: UDP glucose:flavonoid 3-o-glucosyltransferase species: Grape (Vitis vinifera) [TaxId: 29760]
Score = 250 bits (637), Expect = 1e-78
Identities = 113/460 (24%), Positives = 193/460 (41%), Gaps = 24/460 (5%)
Query: 5 PHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKL 64
PHV V+ +P H APL+ + ++A A + + + IK
Sbjct: 2 PHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFS-FFSTSQSNASIFHDSMHTMQCNIKS 60
Query: 65 VTIPDGLELQAADREDPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVGSA 124
I DG+ P + E RA R + P+ C++AD + A
Sbjct: 61 YDISDGVPEGYVFAGRPQEDIELFTRAAPESFRQGMVMAVAETGR-PVSCLVADAFIWFA 119
Query: 125 LEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGIIDPNGFAILNDGLISLSDEIPAWK 184
++A MG+A GP SL+ + ++ E + + + +
Sbjct: 120 ADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIGVSGIQG---REDELLNFIPGMSKV 176
Query: 185 RNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACD----LIPNILP 240
R + + ++ + Q + + + NS ELD + + L
Sbjct: 177 RFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLKSKLKTYLN 236
Query: 241 IGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALGLE 300
IGP + CL WL E+ SVVY++FG+V + L+ LE
Sbjct: 237 IGPFNLITP-----PPVVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALE 291
Query: 301 SLQKPFLWVIRQDFMNGSRAKFPDGFIERVSNRGKIVEWAPQEKVLGHSSVACFISHCGW 360
+ + PF+W +R + +R P+GF+E+ G +V WAPQ +VL H +V F++HCGW
Sbjct: 292 ASRVPFIWSLR----DKARVHLPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGW 347
Query: 361 NSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGIITRQEIQRKVLTLL 420
NS E ++ GVP +C P+F DQ N + + +IG++ E G+ T+ + +L
Sbjct: 348 NSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRI---EGGVFTKSGLMSCFDQIL 404
Query: 421 KND---DIRSNSLKLKEVARKSLLGGGSSFRNFESFISDI 457
+ +R N L+E A +++ GSS NF + + +
Sbjct: 405 SQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLV 444
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} Length = 401 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Score = 127 bits (320), Expect = 3e-33
Identities = 58/432 (13%), Positives = 127/432 (29%), Gaps = 49/432 (11%)
Query: 7 VLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVT 66
VL+ +G V + LA ++ ++ + + +E+ + V
Sbjct: 3 VLLSVCGTRGDVEIGVALADRLKALGVQTRMCAP--------PAAEERLAEVGVPHVPVG 54
Query: 67 IPDGLELQAADREDPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVGSALE 126
+P + LQ P + + +A D + + C + V
Sbjct: 55 LPQHMMLQEGMPPPPPEEEQRLAAMTVEMQFDAVPGAAE--GCAAVVAVGDLAAATGVRS 112
Query: 127 VAESMGIARAAVVPFGPGSLALSLQFPKLLEAGIIDPNGFAILNDGLISLSDEIPAWKRN 186
VAE +G+ VP LA P E +L +
Sbjct: 113 VAEKLGLPFFYSVPSPV-YLASPHLPPAYDEPTTPGVTDIRVLWEER-----------AA 160
Query: 187 EYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACDLIPNILPIGPLLA 246
+ + + ++ +G+ + + +P + + LL+
Sbjct: 161 RFADRYGPTLNRRRAEIGLPPVEDVFGYGHGERPLLAADPVLAPLQPDVDAVQTGAWLLS 220
Query: 247 SNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALGLESLQKPF 306
++L V++ FGS + A++A+ Q
Sbjct: 221 D---------ERPLPPELEAFLAAG--SPPVHIGFGSSSGRGIADAAKVAVEAIRAQGRR 269
Query: 307 LWVIRQDFMNGSRAKFPDGFIERVSNRGKIVEWAPQEKVLGHSSVACFISHCGWNSTMEG 366
+ + R + + + + ++ + + VA I H +
Sbjct: 270 VILSR---------GWTELVLPDDRDDCFAIDEVNFQALFRR--VAAVIHHGSAGTEHVA 318
Query: 367 LSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGIITRQEIQRKVLTLLKNDDIR 426
GVP L P +DQ + A IG+ + T + + + T+L + R
Sbjct: 319 TRAGVPQLVIPRNTDQPYFAGRV-AALGIGVAH---DGPTPTFESLSAALTTVL-APETR 373
Query: 427 SNSLKLKEVARK 438
+ + + +
Sbjct: 374 ARAEAVAGMVLT 385
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} Length = 401 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Score = 124 bits (312), Expect = 3e-32
Identities = 58/433 (13%), Positives = 114/433 (26%), Gaps = 52/433 (12%)
Query: 7 VLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVT 66
VL+ ++G PL+ LA ++ + V + +++ +
Sbjct: 3 VLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAEV------------GVPH 50
Query: 67 IPDGLELQAADREDPLKLGESVARAMRGCLRDLIEKINQS-NDCEPIRCVIADVTVGSAL 125
+P G +A + E V R + ++I + C +
Sbjct: 51 VPVGPSARAPIQRAKPLTAEDVRRFTTEAIATQFDEIPAAAEGCAAVVTTGLLAAAIGVR 110
Query: 126 EVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGIIDPNGFAILNDGLISLSDEIPAWKR 185
VAE +GI + P L E
Sbjct: 111 SVAEKLGIPYFYAFHCPSYVPSPYYPPPPLGEPS---------------------TQDTI 149
Query: 186 NEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACDLIPNILPIGPLL 245
+ + S + G++ + A+ + + D P P + P+ P
Sbjct: 150 DIPAQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTDHPWVAADPVLAPLQPTD 209
Query: 246 ASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALGLESLQKP 305
S A VY+ FGS+ + + +
Sbjct: 210 LDAVQTGAWILPDERPLSPELAAFLDAGPPPVYLGFGSL-GAPADAVRVAIDAIRAHGRR 268
Query: 306 FLWVIRQDFMNGSRAKFPDGFIERVSNRGKIVEWAPQEKVLGHSSVACFISHCGWNSTME 365
+ D + + + + G VA I H G +T
Sbjct: 269 VILSRGWA----------DLVLPDDGADCFAIGEVNHQVLFGR--VAAVIHHGGAGTTHV 316
Query: 366 GLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGIITRQEIQRKVLTLLKNDDI 425
G P + P +DQ + +G+ + I T + + T L +
Sbjct: 317 AARAGAPQILLPQMADQPYYAGRV-AELGVGVAH---DGPIPTFDSLSAALATAL-TPET 371
Query: 426 RSNSLKLKEVARK 438
+ + + R
Sbjct: 372 HARATAVAGTIRT 384
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} Length = 391 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Score = 102 bits (255), Expect = 1e-24
Identities = 55/437 (12%), Positives = 119/437 (27%), Gaps = 71/437 (16%)
Query: 7 VLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVT 66
VL+ ++G PL+ LA ++ E + E+ + + +V
Sbjct: 3 VLITGCGSRGDTEPLVALAARLRELGADARMCLP--------PDYVERCAEVG--VPMVP 52
Query: 67 IPDGLELQAADREDPLKLGESVARAMRGCLRDLIEKINQS-NDCEPIRCVIADVTVGSAL 125
+ + A +P +L A + + + +K+ + C+ + +
Sbjct: 53 VGRAV---RAGAREPGELPPGAAEVVTEVVAEWFDKVPAAIEGCDAVVTTGLLPAAVAVR 109
Query: 126 EVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGIIDPNGFAILNDGLISLSDEIPAWKR 185
+AE +GI V + Q D +D +
Sbjct: 110 SMAEKLGIPYRYTVLSPDHLPSEQSQAE----------------RDMYNQGADRLFGDAV 153
Query: 186 NEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACDLIPNILPIGPLL 245
N + S P E G W+ + V P + G
Sbjct: 154 NSHRASIGLPPVEHLYDYGYTDQP--------WLAADPVLSPLRP---TDLGTVQTGAW- 201
Query: 246 ASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALGLESLQKP 305
S+ L V S + + + +
Sbjct: 202 --------ILPDERPLSAELEAFLAAGSTPVYVGFGSSSRPATADAAKMAIKAVRASGRR 253
Query: 306 FLWVIRQDFMNGSRAKFPDGFIERVSNRGKIVEWAPQEKVLGHSSVACFISHCGWNSTME 365
+ + + +V +++ G VA I H +T+
Sbjct: 254 IVLSRGWADL----------VLPDDGADCFVVGEVNLQELFGR--VAAAIHHDSAGTTLL 301
Query: 366 GLSMGVPFLCWPYFSD----QYQNRNYICEAWKIGLQFFADENGIITRQEIQRKVLTLLK 421
+ G+P + D Q + + + +G+ + + T + + T L
Sbjct: 302 AMRAGIPQIVVRRVVDNVVEQAYHADRV-AELGVGVAV---DGPVPTIDSLSAALDTAL- 356
Query: 422 NDDIRSNSLKLKEVARK 438
+IR+ + + + R
Sbjct: 357 APEIRARATTVADTIRA 373
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 468 | |||
| d2c1xa1 | 450 | UDP glucose:flavonoid 3-o-glucosyltransferase {Gra | 100.0 | |
| d2pq6a1 | 473 | (Iso)flavonoid glycosyltransferase {Medicago trunc | 100.0 | |
| d2vcha1 | 471 | Hydroquinone glucosyltransferase {Thale cress (Ara | 100.0 | |
| d2acva1 | 461 | Triterpene UDP-glucosyl transferase UGT71G1 {Medic | 100.0 | |
| d1rrva_ | 401 | TDP-vancosaminyltransferase GftD {Amycolatopsis or | 100.0 | |
| d1iira_ | 401 | UDP-glucosyltransferase GtfB {Amycolatopsis orient | 100.0 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 100.0 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 99.93 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.17 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 99.07 | |
| d1v4va_ | 373 | UDP-N-acetylglucosamine 2-epimerase {Thermus therm | 98.81 | |
| d1o6ca_ | 377 | UDP-N-acetylglucosamine 2-epimerase {Bacillus subt | 98.79 | |
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 98.7 | |
| d1f6da_ | 376 | UDP-N-acetylglucosamine 2-epimerase {Escherichia c | 98.52 | |
| d2f9fa1 | 166 | First mannosyl transferase WbaZ {Archaeoglobus ful | 98.29 | |
| d2bfwa1 | 196 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 97.17 | |
| d1pswa_ | 348 | ADP-heptose LPS heptosyltransferase II {Escherichi | 96.72 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 92.81 | |
| d1ccwa_ | 137 | Glutamate mutase, small subunit {Clostridium cochl | 91.54 | |
| d1j9ja_ | 247 | SurE homolog TM1662 {Thermotoga maritima [TaxId: 2 | 90.97 | |
| d1uqta_ | 456 | Trehalose-6-phosphate synthase, OtsA {Escherichia | 90.66 | |
| d2qy9a2 | 211 | GTPase domain of the signal recognition particle r | 89.63 | |
| d1j6ua1 | 89 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 88.44 | |
| d1j8yf2 | 211 | GTPase domain of the signal sequence recognition p | 87.35 | |
| d1okkd2 | 207 | GTPase domain of the signal recognition particle r | 86.46 | |
| d1gsoa2 | 105 | Glycinamide ribonucleotide synthetase (GAR-syn), N | 85.8 | |
| d1l5xa_ | 276 | SurE homolog PAE2908 (SurE-alpha) {Archaeon Pyroba | 85.34 | |
| d1vmaa2 | 213 | GTPase domain of the signal recognition particle r | 85.29 | |
| d1uana_ | 227 | Hypothetical protein TT1542 {Thermus thermophilus | 85.15 | |
| d1qkka_ | 140 | Transcriptional regulatory protein DctD, receiver | 83.19 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 83.09 | |
| d1gsaa1 | 122 | Prokaryotic glutathione synthetase, N-terminal dom | 83.05 | |
| d1ls1a2 | 207 | GTPase domain of the signal sequence recognition p | 82.01 | |
| d1n1ea2 | 189 | Glycerol-3- phosphate dehydrogenase {Trypanosome ( | 81.61 | |
| d1u7za_ | 223 | Coenzyme A biosynthesis bifunctional protein CoaBC | 80.92 |
| >d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: UDP glucose:flavonoid 3-o-glucosyltransferase species: Grape (Vitis vinifera) [TaxId: 29760]
Probab=100.00 E-value=4.9e-57 Score=446.81 Aligned_cols=439 Identities=25% Similarity=0.418 Sum_probs=323.3
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCCCCCCCcCCCCCHHHH
Q 012212 5 PHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDGLELQAADREDPLKL 84 (468)
Q Consensus 5 ~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 84 (468)
.||+|+|+|+.||++|++.||++|++|||+|||++............ .........+.+..++++.+.......+....
T Consensus 2 ~hvl~~p~P~~gH~~p~l~la~~L~~rGH~Vt~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (450)
T d2c1xa1 2 PHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFH-DSMHTMQCNIKSYDISDGVPEGYVFAGRPQED 80 (450)
T ss_dssp CEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC--------CTTEEEEECCCCCCTTCCCCCCTTHH
T ss_pred CEEEEECchhHhHHHHHHHHHHHHHHCCCcEEEEEccCccchhhhhc-ccccccCCCceeeecCCCCCcchhhccchHHH
Confidence 59999999999999999999999999999999998654333322211 11112335688888888876654334444444
Q ss_pred HHHHHHHh-hHHHHHHHHHHhhCCCCCCceEEEecCCcccHHHHHHHhCCceEEEcccchHHHHHHhhhhhHhhcCCCCC
Q 012212 85 GESVARAM-RGCLRDLIEKINQSNDCEPIRCVIADVTVGSALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGIIDP 163 (468)
Q Consensus 85 ~~~~~~~~-~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~ 163 (468)
+..+.... ....+.+.+.+.... .+||+||+|.+..++..+|+.+|+|++.+.+.+.........++........+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~Dlvi~D~~~~~~~~~a~~~~~p~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (450)
T d2c1xa1 81 IELFTRAAPESFRQGMVMAVAETG--RPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIGVSG 158 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHT--CCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHHHHHCSSC
T ss_pred HHHHHHHHHHHhHHHHHHHHHhCC--CCCeEEEECCccHHHHHHHHHhCCCEEEEecCchhhhhhhhcccccccccCCCc
Confidence 44443333 333344444444433 789999999999999999999999999999988887766655544332211111
Q ss_pred CCcccccCCcccccCCCccCcccccCcCCCCCChhHHHHHHHHHHHHHhhccccEEEEcCcccCChhh----hccCCCce
Q 012212 164 NGFAILNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPA----CDLIPNIL 239 (468)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~----~~~~p~v~ 239 (468)
... .........++.......... ...........+........+....++....++...+.... .+..|++.
T Consensus 159 ~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~ 235 (450)
T d2c1xa1 159 IQG--REDELLNFIPGMSKVRFRDLQ-EGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLKSKLKTYL 235 (450)
T ss_dssp CTT--CTTCBCTTSTTCTTCBGGGSC-TTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHHHSSCEE
T ss_pred ccc--ccccccccCCcccchhHhhhh-hhhhcccchHHHHHHHHHHHhhhhcccccccccHHhhhhhhhhhccccCCcee
Confidence 110 111222233333333333222 12222222233444445555667788888888888776432 45567888
Q ss_pred eeccccCCCCCCCCCCCCCCCCCchhhhhhcccCccEEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCcc
Q 012212 240 PIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALGLESLQKPFLWVIRQDFMNGSR 319 (468)
Q Consensus 240 ~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~l~~~~~~~~~~~~ 319 (468)
++|++....... ....++++..|+...+.+++||+++||......+++..++.++++++.+++|+.... ..
T Consensus 236 ~~g~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~v~~s~gs~~~~~~~~~~~~~~~~~~~~~~vl~~~~~~----~~ 306 (450)
T d2c1xa1 236 NIGPFNLITPPP-----VVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSLRDK----AR 306 (450)
T ss_dssp ECCCHHHHC--------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEEECCGG----GG
T ss_pred ecCCccccCCCC-----CCcchhhhccccccCCccceeeecccccccCCHHHHHHHHHHHHhcCCeEEEEECCC----cc
Confidence 889876544322 123567788999988888899999999988899999999999999999999998876 55
Q ss_pred cCCchhHHHHhCCCceEEcccChHHHhcCCCCCceeeccCchhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEe
Q 012212 320 AKFPDGFIERVSNRGKIVEWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQF 399 (468)
Q Consensus 320 ~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l 399 (468)
..+|+++..+.+.|+++.+|+||.++|.||++++||||||+||++||+++|||||++|+++||+.||+|+++++|+|+.+
T Consensus 307 ~~l~~~~~~~~~~nv~~~~~~pq~~lL~hp~~~~fItHGG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l 386 (450)
T d2c1xa1 307 VHLPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRI 386 (450)
T ss_dssp GGSCTTHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEEC
T ss_pred ccCChhhhhhccccccccccCChHhhhccCceeEEEccCCccHHHHHHHcCCCEEecccccchHHHHHHHHHHcCcEEEe
Confidence 56888888888999999999999999999999999999999999999999999999999999999999997635999999
Q ss_pred eccCCCccCHHHHHHHHHHHhcChHHH---HHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhhc
Q 012212 400 FADENGIITRQEIQRKVLTLLKNDDIR---SNSLKLKEVARKSLLGGGSSFRNFESFISDIKMLI 461 (468)
Q Consensus 400 ~~~~~~~~t~~~l~~ai~~~l~~~~~r---~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 461 (468)
+..+ +|+++|+++|+++|+|++|| +|+++|++..+.++.+||||.+++..++|.+.+.+
T Consensus 387 ~~~~---~t~~~l~~ai~~vL~d~~y~~~~~r~~~l~~~~~~a~~~~gss~~~~~~~~e~v~r~~ 448 (450)
T d2c1xa1 387 EGGV---FTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVSKPK 448 (450)
T ss_dssp GGGS---CCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHTSCC
T ss_pred cCCC---cCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhhhc
Confidence 9988 99999999999999999876 67888888888889999999999999999998764
|
| >d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: (Iso)flavonoid glycosyltransferase species: Medicago truncatula [TaxId: 3880]
Probab=100.00 E-value=7.2e-57 Score=447.89 Aligned_cols=450 Identities=33% Similarity=0.656 Sum_probs=327.6
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCCCCCCCcC---CCCC
Q 012212 4 QPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDGLELQAA---DRED 80 (468)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~---~~~~ 80 (468)
+.||+|+|+|+.||++|+++||++|++|||+|||++++.+...+.+.+..........+++..++++...... ...+
T Consensus 1 ~~hvl~~p~p~~gH~~P~~~lA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (473)
T d2pq6a1 1 KPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIPDGLTPMEGDGDVSQD 80 (473)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEECCCCC---------CC
T ss_pred CCEEEEECchhhhHHHHHHHHHHHHHHCCCeEEEEeCcchHhHHhhccCcccccCCCCcceeecCCCCcccccccchhhh
Confidence 3699999999999999999999999999999999999998888887765544455567888888877665432 2334
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCcccHHHHHHHhCCceEEEcccchHHHHHHhhhhhHhhcCC
Q 012212 81 PLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVGSALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGI 160 (468)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~ 160 (468)
....+..+...+...+.+....+........+|+|+.|....+...+|+.+++|++.+.+.+..........+.......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~a~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (473)
T d2pq6a1 81 VPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVERGI 160 (473)
T ss_dssp HHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeEEEecCcchhhHHHHHHhCCCceeeccccchhhhhhhcccccccccC
Confidence 45555555555555566666666655555779999999999999999999999999999988877666666555544333
Q ss_pred CCCCCccc----ccCCcccccCCCccCcccccCcCCCCCChhHHHHHHHHHHHHHhhccccEEEEcCcccCChhhhc---
Q 012212 161 IDPNGFAI----LNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACD--- 233 (468)
Q Consensus 161 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~~~--- 233 (468)
.+...... ........+|++......... .+.............+....+.+...+..+.+++.+.+.....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (473)
T d2pq6a1 161 IPFKDESYLTNGCLETKVDWIPGLKNFRLKDIV-DFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESDVINALS 239 (473)
T ss_dssp SSCSSGGGGTSSGGGCBCCSSTTCCSCBGGGSC-GGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESSCGGGGHHHHHHHH
T ss_pred CCccccccccccccccccccCCCccccchhhhh-hhhhhcchhHHHHHHHHHHHHHHHhhhcccccchhhhhHhHHHHHH
Confidence 22111110 011122233444333333333 2223333334556666667777888899999998877654322
Q ss_pred -cCCCceeeccccCCCCC-------CCCCCCCCCCCCchhhhhhcccCccEEEEEecccccCCHHHHHHHHHHHHhCCCC
Q 012212 234 -LIPNILPIGPLLASNHS-------GDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALGLESLQKP 305 (468)
Q Consensus 234 -~~p~v~~vGpl~~~~~~-------~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~a~~~~~~~ 305 (468)
..+...+.++....... .......+..+.+...|+.......++|+++||......+..+.++.++++++.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~gs~~~~~~~~~~~~~~~~~~~~~~ 319 (473)
T d2pq6a1 240 STIPSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPEQLLEFAWGLANCKKS 319 (473)
T ss_dssp TTCTTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCCHHHHHHHHHHHHHTTCE
T ss_pred hcCCcccccCCccccCCCCCCccccccCCcccccccHHHHHHhhhcCCCceeeeccCccccccHHHHHHHHHHHHhcCCe
Confidence 22344443332211000 0000122334566778888888888999999999888999999999999999999
Q ss_pred EEEEEcCCCCCCcccCCchhHHHHhCCCceEEcccChHHHhcCCCCCceeeccCchhHHHhhhcCCceeccccccchhhh
Q 012212 306 FLWVIRQDFMNGSRAKFPDGFIERVSNRGKIVEWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQN 385 (468)
Q Consensus 306 ~l~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~~~DQ~~n 385 (468)
++|+++.....+....+++++....++|+++.+|+||.+||.||+|++||||||+||++||+++|||||++|+++||+.|
T Consensus 320 ~i~~~~~~~~~~~~~~~~~~~~~~~~~Nv~~~~~~Pq~~lL~hp~~~~fItHGG~~s~~Eal~~GVP~lv~P~~~DQ~~n 399 (473)
T d2pq6a1 320 FLWIIRPDLVIGGSVIFSSEFTNEIADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQPTD 399 (473)
T ss_dssp EEEECCGGGSTTTGGGSCHHHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHH
T ss_pred EEEEEccCCcccccccCcccchhhccCceEEeeeCCHHHHhcCCcCcEEEecCCccHHHHHHHcCCCEEeccchhhhHHH
Confidence 99999877555555567788777889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhceeEeeccCCCccCHHHHHHHHHHHhcChH---HHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHH
Q 012212 386 RNYICEAWKIGLQFFADENGIITRQEIQRKVLTLLKNDD---IRSNSLKLKEVARKSLLGGGSSFRNFESFISDIK 458 (468)
Q Consensus 386 a~rv~~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~~~---~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 458 (468)
|+||++++|+|+.++. + +|+++|+++|+++|+|++ ||+||++|++++++++.+||+|.+++++||+++.
T Consensus 400 a~rv~~~~G~G~~l~~-~---~t~~~l~~ai~~vl~d~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~~~~~i~~~~ 471 (473)
T d2pq6a1 400 CRFICNEWEIGMEIDT-N---VKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKVIKDVL 471 (473)
T ss_dssp HHHHHHTSCCEEECCS-S---CCHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHcCeEEeeCC-C---cCHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Confidence 9998543699999984 4 999999999999999986 9999999999999999999999999999999875
|
| >d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Hydroquinone glucosyltransferase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=1.1e-53 Score=424.61 Aligned_cols=441 Identities=27% Similarity=0.413 Sum_probs=319.4
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHH-CCCEEEEEECCcchHH-HHHhhhhhccCCCCCeEEEEcCCCCCCCcCCCCCHH
Q 012212 5 PHVLVIPYPAQGHVAPLMKLATKIAE-RAIKVTVVNTQFIHKK-IIASLQEKAEDSSSQIKLVTIPDGLELQAADREDPL 82 (468)
Q Consensus 5 ~~Il~~~~~~~GH~~p~~~LA~~L~~-rGH~Vt~~~~~~~~~~-i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 82 (468)
.||+|+|+|+.||++|+++||++|++ |||+|||++++.+... +...+.. .....+....++...........+..
T Consensus 2 ~hil~~p~p~~GH~~P~l~La~~L~~~rGH~Vt~v~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (471)
T d2vcha1 2 PHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLD---SLPSSISSVFLPPVDLTDLSSSTRIE 78 (471)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC----CCTTEEEEECCCCCCTTSCTTCCHH
T ss_pred CEEEEECchhHhHHHHHHHHHHHHHHccCCEEEEEeCCCcchhhhhhcccc---cCCCCcceeecCcccccccccccchH
Confidence 59999999999999999999999974 8999999998765433 3333322 22245666666644333322455666
Q ss_pred HHHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCcccHHHHHHHhCCceEEEcccchHHHHHHhhhhhHhhcCCCC
Q 012212 83 KLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVGSALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGIID 162 (468)
Q Consensus 83 ~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~ 162 (468)
..+..+...+...+++..+.+.... .++|+||.|....++..+++.+|+|++.+.+.+........+.|.........
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~li~~~~~~~~~~~a~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (471)
T d2vcha1 79 SRISLTVTRSNPELRKVFDSFVEGG--RLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSCE 156 (471)
T ss_dssp HHHHHHHHTTHHHHHHHHHHHHHTT--CCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHHHCCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC--CCCcEEEEeccchHHHHHHHHhCCCcccccccchhhHHHhhcCcccccccCcc
Confidence 7777777777777888877776655 67999999999999999999999999999988877666655555444322211
Q ss_pred CCCcccccCCcccccCCCccCcccccCcCCCCCChhHHHHHHHHHHHHHhhccccEEEEcCcccCChhhh-------ccC
Q 012212 163 PNGFAILNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPAC-------DLI 235 (468)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~~-------~~~ 235 (468)
.. ........++................ ..................+..+.+.+...+.... ...
T Consensus 157 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (471)
T d2vcha1 157 FR-----ELTEPLMLPGCVPVAGKDFLDPAQDR---KDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPGLDK 228 (471)
T ss_dssp GG-----GCSSCBCCTTCCCBCGGGSCGGGSCT---TSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHHSCCTTC
T ss_pred cc-----cccccccccccccccccccccccccc---chHHHHHHHHHHHhhcccccccchhHHHHHHHHHhhcccccCCC
Confidence 00 00111122222211111111011111 1123333334444566777777777666554321 122
Q ss_pred CCceeeccccCCCCCCCCCCCCCCCCCchhhhhhcccCccEEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEcCCCC
Q 012212 236 PNILPIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALGLESLQKPFLWVIRQDFM 315 (468)
Q Consensus 236 p~v~~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~l~~~~~~~~ 315 (468)
+.+.++++....... ...+...+++.+|++.....+++|+++|+.....+..+..+..++...+.+++|.+.....
T Consensus 229 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (471)
T d2vcha1 229 PPVYPVGPLVNIGKQ----EAKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRSPSG 304 (471)
T ss_dssp CCEEECCCCCCCSCS----CC-----CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEECCCCS
T ss_pred CCccCcccccccCcc----ccccccchhHHHHHHhcCCccccccccccccCCCHHHHHHHHHHHHhhcCCeEEEeccccc
Confidence 345555554433221 1223456788899999888899999999998888999999999999999999999876521
Q ss_pred C------------CcccCCchhHHHH-hCCCceEEcccChHHHhcCCCCCceeeccCchhHHHhhhcCCceeccccccch
Q 012212 316 N------------GSRAKFPDGFIER-VSNRGKIVEWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQ 382 (468)
Q Consensus 316 ~------------~~~~~~~~~~~~~-~~~nv~~~~~~p~~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~~~DQ 382 (468)
. +....+|+++... .++||++.+|+||.+||+||+|++||||||+||++||+++|||||++|+++||
T Consensus 305 ~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~w~Pq~~lL~hp~~~~fVtHGG~gS~~EAl~~GvP~v~~P~~~DQ 384 (471)
T d2vcha1 305 IANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQ 384 (471)
T ss_dssp STTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTH
T ss_pred cccccccccccccchhhhCCchhhhhccCCCeeecccCCHHHHhcCccCCEEEecCCccHHHHHHHcCCCEEEccccccc
Confidence 1 1233466666544 37899999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHhhceeEeeccCCCccCHHHHHHHHHHHhcChH---HHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHh
Q 012212 383 YQNRNYICEAWKIGLQFFADENGIITRQEIQRKVLTLLKNDD---IRSNSLKLKEVARKSLLGGGSSFRNFESFISDIKM 459 (468)
Q Consensus 383 ~~na~rv~~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~~~---~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 459 (468)
+.||+|+++.+|+|+.+...+++.+|+++|+++|+++|+|++ ||+||++|+++++++.+|||+|.++++.||+.++.
T Consensus 385 ~~nA~rv~e~lG~Gv~l~~~~~~~~t~~~l~~ai~~vl~~~~~~~~r~ra~~l~e~~~~a~~~gG~s~~~~~~~~~~~~~ 464 (471)
T d2vcha1 385 KMNAVLLSEDIRAALRPRAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVALKWKA 464 (471)
T ss_dssp HHHHHHHHHTTCCEECCCCCTTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHheeEEEEecCCCCcCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Confidence 999999855369999998877777999999999999999975 99999999999999999999999999999999987
Q ss_pred hcc
Q 012212 460 LIS 462 (468)
Q Consensus 460 ~~~ 462 (468)
...
T Consensus 465 ~~~ 467 (471)
T d2vcha1 465 HKK 467 (471)
T ss_dssp HHH
T ss_pred hhH
Confidence 654
|
| >d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Triterpene UDP-glucosyl transferase UGT71G1 species: Medicago truncatula [TaxId: 3880]
Probab=100.00 E-value=1.1e-54 Score=430.85 Aligned_cols=438 Identities=25% Similarity=0.416 Sum_probs=318.6
Q ss_pred CCCCEEEEEcCCCccChHHHHHHHHHHHHCCCEEE--EEECCcchH-HHHHhhhhhccCCCCCeEEEEcCCCCCCCcCCC
Q 012212 2 SRQPHVLVIPYPAQGHVAPLMKLATKIAERAIKVT--VVNTQFIHK-KIIASLQEKAEDSSSQIKLVTIPDGLELQAADR 78 (468)
Q Consensus 2 ~~~~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt--~~~~~~~~~-~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 78 (468)
++..||+|+|+|+.||++|+++||++|++|||+|| +++++.... .+...+.... .....+++..++++........
T Consensus 5 ~~~~hil~~p~P~~GH~~P~l~lA~~L~~rGH~V~vt~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 83 (461)
T d2acva1 5 NKNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVL-ASQPQIQLIDLPEVEPPPQELL 83 (461)
T ss_dssp HHCEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHH-CSCTTEEEEECCCCCCCCGGGG
T ss_pred CCCCeEEEecChhhhHHHHHHHHHHHHHHCCCCeEEEEEeCCccchhhhhhcccccc-cCCCCeeEEECCCCCCchhhhh
Confidence 35679999999999999999999999999999876 455544333 3333332222 4457889999987766554344
Q ss_pred CCHHHHHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCcccHHHHHHHhCCceEEEcccchHHHHHHhhhhhHhhc
Q 012212 79 EDPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVGSALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEA 158 (468)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~ 158 (468)
.....+...+.+.+...++++++.+.. .++|+|++|.+..++..+|+.+++|++...+..........+++.....
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~d~vi~d~~~~~~~~~a~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 159 (461)
T d2acva1 84 KSPEFYILTFLESLIPHVKATIKTILS----NKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIE 159 (461)
T ss_dssp GSHHHHHHHHHHHTHHHHHHHHHHHCC----TTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSCTT
T ss_pred hcHHHHHHHHHHHHHHHHHHHHHHhcc----CCCeEEEEeccchHHHHHHHHhCCCeEEEecccchhhHHhhcccccccc
Confidence 556666777778888888888888875 5699999999999999999999999999999887766655554333221
Q ss_pred CCCCCCCcccccCCcccccCCCccCcccccCcCCCCCChhHHHHHHHHHHHHHhhccccEEEEcCcccCChhh-------
Q 012212 159 GIIDPNGFAILNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPA------- 231 (468)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~------- 231 (468)
.... .. .........++............+... .........+........+..+.+++..++...
T Consensus 160 ~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (461)
T d2acva1 160 EVFD---DS-DRDHQLLNIPGISNQVPSNVLPDACFN---KDGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDH 232 (461)
T ss_dssp CCCC---CS-SGGGCEECCTTCSSCEEGGGSCHHHHC---TTTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHHHHH
T ss_pred cccc---cc-ccccccccccccccchhhhhhhhhhhc---cchhHHHHHHHHHhhhccccccccccccccchhhhhhhhc
Confidence 1111 00 111111122222211111111000000 112223334445556677888888776655321
Q ss_pred hccCCCceeeccccCCCCCCCCCCCCCCCCCchhhhhhcccCccEEEEEeccc-ccCCHHHHHHHHHHHHhCCCCEEEEE
Q 012212 232 CDLIPNILPIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSV-AVLSQQQFAELALGLESLQKPFLWVI 310 (468)
Q Consensus 232 ~~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~-~~~~~~~~~~~~~a~~~~~~~~l~~~ 310 (468)
.+..++++++||.+........ ...+..++++..|++......++++++|+. ...+.+.+..++.+++..+.+++|+.
T Consensus 233 ~~~~~~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (461)
T d2acva1 233 DEKIPPIYAVGPLLDLKGQPNP-KLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLWSN 311 (461)
T ss_dssp CTTSCCEEECCCCCCSSCCCBT-TBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEEEC
T ss_pred ccCCCCceeeccccccCCccCC-CccccCcHHHHHHHhhCCccceeeeeccccccCCCHHHHHHHHHHHHhcCccEEEEe
Confidence 2345788889987765432211 111234556778888887777888888876 55678899999999999999999998
Q ss_pred cCCCCCCcccCCchhHHH--HhCCCceEEcccChHHHhcCCCCCceeeccCchhHHHhhhcCCceeccccccchhhhHHH
Q 012212 311 RQDFMNGSRAKFPDGFIE--RVSNRGKIVEWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNY 388 (468)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~--~~~~nv~~~~~~p~~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~~~DQ~~na~r 388 (468)
... ....++++.+ ..++|+++..|.||.+++.||+|++||||||+||++||+++|||||++|+++||+.||+|
T Consensus 312 ~~~-----~~~~~~~~~~~~~~~~n~~v~~~~pq~~~l~~p~~~~fItHGG~gs~~eAl~~GVP~l~~P~~~DQ~~nA~r 386 (461)
T d2acva1 312 SAE-----KKVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFR 386 (461)
T ss_dssp CCC-----GGGSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHH
T ss_pred ecc-----cccCCccchhhhccCCCeEEEecCCHHHHHhcccCCEEEecCCccHHHHHHHcCCCEEeCCcccchHHHHHH
Confidence 766 1234455443 348999999999999999999999999999999999999999999999999999999999
Q ss_pred H-HHHhhceeEeeccC---CCccCHHHHHHHHHHHhcC-hHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHH
Q 012212 389 I-CEAWKIGLQFFADE---NGIITRQEIQRKVLTLLKN-DDIRSNSLKLKEVARKSLLGGGSSFRNFESFISDIK 458 (468)
Q Consensus 389 v-~~~lG~g~~l~~~~---~~~~t~~~l~~ai~~~l~~-~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 458 (468)
+ ++ +|+|+.++.++ ...+|+++|+++|+++|+| +.||+||++|+++++++++|||||.+++++||++|+
T Consensus 387 lve~-~G~G~~l~~~~~~~~~~~t~~~l~~a~~~vl~~d~~~r~~a~~l~~~~r~a~~~gg~s~~~~~~~~~~~~ 460 (461)
T d2acva1 387 LVKE-WGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKDSIVHKKVQEMKEMSRNAVVDGGSSLISVGKLIDDIT 460 (461)
T ss_dssp HHHT-SCCEEESCSSCCTTCCCCCHHHHHHHHHHHTCTTCTHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHH
T ss_pred HHHH-hCceEEeeccccccCCccCHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHhc
Confidence 7 56 69999997653 3458999999999999975 569999999999999999999999999999999986
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Probab=100.00 E-value=1.3e-45 Score=358.70 Aligned_cols=383 Identities=11% Similarity=0.062 Sum_probs=254.9
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCCCCCCC---cCCCCCH
Q 012212 5 PHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDGLELQ---AADREDP 81 (468)
Q Consensus 5 ~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~---~~~~~~~ 81 (468)
|||||+++++.||++|+++||++|++|||+|||++++.+.+.+++.| +.|..++...... .......
T Consensus 1 mrIl~~~~gt~Ghv~P~l~lA~~L~~rGh~V~~~t~~~~~~~v~~~g----------~~~~~~~~~~~~~~~~~~~~~~~ 70 (401)
T d1rrva_ 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAEVG----------VPHVPVGLPQHMMLQEGMPPPPP 70 (401)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHT----------CCEEECSCCGGGCCCTTSCCCCH
T ss_pred CeEEEECCCChhHHHHHHHHHHHHHHCCCEEEEEEChhhHHHHHHCC----------CeEEEcCCcHHhhhccccccccH
Confidence 79999999999999999999999999999999999999999998854 6777765321111 1123333
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCcc-cHHHHHHHhCCceEEEcccchHHHHHHhhhhhHhhcCC
Q 012212 82 LKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVG-SALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGI 160 (468)
Q Consensus 82 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~-~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~ 160 (468)
............. +.+.+..+.. ..++|+++.|.... ++..+|+.+|+|++...+.+..... ..
T Consensus 71 ~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~i~~~~~~~~~~~~a~~~~~p~~~~~~~~~~~~~-----------~~ 135 (401)
T d1rrva_ 71 EEEQRLAAMTVEM-QFDAVPGAAE---GCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLAS-----------PH 135 (401)
T ss_dssp HHHHHHHHHHHHH-HHHHHHHHTT---TCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSCC-----------SS
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHh---cCCCeEEEEcCchhhHHHHHHHHhCCCcccccccchhhcc-----------cc
Confidence 3333333222223 3333333322 26799999986544 7778999999999987765542110 00
Q ss_pred CCCCCcccccCCcccccCCCccCcccccCcCCCCCChhHHHHHHHHHHHHHh-----------hccccEEEEcCcccCCh
Q 012212 161 IDPNGFAILNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQA-----------VKISNWIINNSVYELDS 229 (468)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~l~~~~~~le~ 229 (468)
.. .... ....+.... ....+. ..................+. .........+..+.+..
T Consensus 136 ~~-~~~~------~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (401)
T d1rrva_ 136 LP-PAYD------EPTTPGVTD---IRVLWE-ERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGERPLLAADPVLAP 204 (401)
T ss_dssp SC-CCBC------SCCCTTCCC---HHHHHH-HHHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCSSCEECSCTTTSC
T ss_pred cc-cccc------cccccccch---hhhhHH-HHHHHHHhhhHHHHHHHHHHhCCcccchhhhhccccchhhcchhhhcc
Confidence 00 0000 000000000 000000 00000000001111111111 11233344444544433
Q ss_pred hhhccCCCceeeccccCCCCCCCCCCCCCCCCCchhhhhhcccCccEEEEEecccccC-CHHHHHHHHHHHHhCCCCEEE
Q 012212 230 PACDLIPNILPIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVL-SQQQFAELALGLESLQKPFLW 308 (468)
Q Consensus 230 ~~~~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~-~~~~~~~~~~a~~~~~~~~l~ 308 (468)
.+..++++++|+++.+...+ .+.++..|++... ++||+++||.... .....+.++.++...+..++|
T Consensus 205 --~~~~~~~~~~g~~~~~~~~~--------~~~~~~~~l~~~~--~~v~~~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (401)
T d1rrva_ 205 --LQPDVDAVQTGAWLLSDERP--------LPPELEAFLAAGS--PPVHIGFGSSSGRGIADAAKVAVEAIRAQGRRVIL 272 (401)
T ss_dssp --CCSSCCCEECCCCCCCCCCC--------CCHHHHHHHHSSS--CCEEECCTTCCSHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred --cCCCCCeEEECCCccccccc--------CCHHHHHhhccCC--CeEEEECCccccCCHHHHHHHHHHHHhhcCCeEEE
Confidence 35566889999988776543 6778889998754 4899999998543 345677888899999998888
Q ss_pred EEcCCCCCCcccCCchhHHHHhCCCceEEcccChHHHhcCCCCCceeeccCchhHHHhhhcCCceeccccccchhhhHHH
Q 012212 309 VIRQDFMNGSRAKFPDGFIERVSNRGKIVEWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNY 388 (468)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~~~DQ~~na~r 388 (468)
..... . .... ..++|+++.+|+||.++|.|+ ++||||||+||+.||+++|||+|++|+.+||+.||++
T Consensus 273 ~~~~~----~--~~~~----~~~~~v~~~~~~p~~~ll~~~--~~~I~hgG~~t~~Eal~~GvP~l~~P~~~DQ~~na~~ 340 (401)
T d1rrva_ 273 SRGWT----E--LVLP----DDRDDCFAIDEVNFQALFRRV--AAVIHHGSAGTEHVATRAGVPQLVIPRNTDQPYFAGR 340 (401)
T ss_dssp ECTTT----T--CCCS----CCCTTEEEESSCCHHHHGGGS--SEEEECCCHHHHHHHHHHTCCEEECCCSBTHHHHHHH
T ss_pred ecccc----c--cccc----cCCCCEEEEeccCcHHHhhhc--cEEEecCCchHHHHHHHhCCCEEEecccccHHHHHHH
Confidence 77644 1 1111 237899999999999999775 5599999999999999999999999999999999999
Q ss_pred HHHHhhceeEeeccCCCccCHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHH
Q 012212 389 ICEAWKIGLQFFADENGIITRQEIQRKVLTLLKNDDIRSNSLKLKEVARKSLLGGGSSFRNFESFISDI 457 (468)
Q Consensus 389 v~~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 457 (468)
+++. |+|+.++..+ +|++.|+++|+++|+ ++||++|++++++++. ++..++++.+++.+
T Consensus 341 v~~~-G~g~~l~~~~---~~~~~L~~ai~~vl~-~~~r~~a~~~~~~~~~-----~g~~~aa~~ie~~~ 399 (401)
T d1rrva_ 341 VAAL-GIGVAHDGPT---PTFESLSAALTTVLA-PETRARAEAVAGMVLT-----DGAAAAADLVLAAV 399 (401)
T ss_dssp HHHH-TSEEECSSSC---CCHHHHHHHHHHHTS-HHHHHHHHHHTTTCCC-----CHHHHHHHHHHHHH
T ss_pred HHHC-CCEEEcCcCC---CCHHHHHHHHHHHhC-HHHHHHHHHHHHHHhh-----cCHHHHHHHHHHHh
Confidence 9994 9999999887 999999999999994 7899999999988754 24445555554443
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=100.00 E-value=3.5e-44 Score=348.08 Aligned_cols=383 Identities=12% Similarity=0.099 Sum_probs=257.1
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCCCCCCCcC--CCCCHH
Q 012212 5 PHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDGLELQAA--DREDPL 82 (468)
Q Consensus 5 ~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~--~~~~~~ 82 (468)
|||+++++|+.||++|+++||++|+++||+|||++++.+.+.+.+ .++.|+.++........ ......
T Consensus 1 mkil~~~~gt~Gh~~P~lala~~L~~~Gh~V~~~~~~~~~~~v~~----------~g~~~~~i~~~~~~~~~~~~~~~~~ 70 (401)
T d1iira_ 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAE----------VGVPHVPVGPSARAPIQRAKPLTAE 70 (401)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH----------TTCCEEECCC-------CCSCCCHH
T ss_pred CEEEEECCCChhHHHHHHHHHHHHHHCCCEEEEEeCcchHHHHHH----------cCCeEEECCcchhhhhhccccchHH
Confidence 799999999999999999999999999999999999999999988 55888888754433221 222333
Q ss_pred HHHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCcc---cHHHHHHHhCCceEEEcccchHHHHHHhhhhhHhhcC
Q 012212 83 KLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVG---SALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAG 159 (468)
Q Consensus 83 ~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~---~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~ 159 (468)
.............++.+.+.. ..+|.++.+.... +...+++.+++|.....+.+..... .
T Consensus 71 ~~~~~~~~~~~~~~~~l~~~~------~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~-----------~ 133 (401)
T d1iira_ 71 DVRRFTTEAIATQFDEIPAAA------EGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVPS-----------P 133 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT------TTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSCC-----------S
T ss_pred HHHHHHHHHHHHHHHHHHHHh------hcCcceEEeecchhHHHHHHHHHHhcccccccccccccccc-----------c
Confidence 333333334444333333332 3356666665543 5667999999999887765432110 0
Q ss_pred CCCCCCcccccCCcccccCCCccCcccccCcCCCCCChhHHHHHHHHHHHHH-----------hhccccEEEEcCcccCC
Q 012212 160 IIDPNGFAILNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQ-----------AVKISNWIINNSVYELD 228 (468)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~l~~~~~~le 228 (468)
.......+ .+........... ....................+ .....+..+.++.+.++
T Consensus 134 ~~~~~~~~---------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (401)
T d1iira_ 134 YYPPPPLG---------EPSTQDTIDIPAQ-WERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTDHPWVAADPVLA 203 (401)
T ss_dssp SSCCCC------------------CHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTTTS
T ss_pred cccccccc---------cccccchhcchhh-hhhhhhHHHHHHHHHHHHHHHHhcCccchhhhhhcccchhhhccccccc
Confidence 00000000 0000000000000 000000000000000111111 22356778889999998
Q ss_pred hhhhccCCCceeeccccCCCCCCCCCCCCCCCCCchhhhhhcccCccEEEEEecccccCCHHHHHHHHHHHHhCCCCEEE
Q 012212 229 SPACDLIPNILPIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALGLESLQKPFLW 308 (468)
Q Consensus 229 ~~~~~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~l~ 308 (468)
++ .+..+....+|++....... .+.....|++.. +++||+++|+.. .....++.++++++..+..++|
T Consensus 204 ~~-~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~--~~~i~~~~~~~~-~~~~~~~~~~~al~~~~~~~~~ 271 (401)
T d1iira_ 204 PL-QPTDLDAVQTGAWILPDERP--------LSPELAAFLDAG--PPPVYLGFGSLG-APADAVRVAIDAIRAHGRRVIL 271 (401)
T ss_dssp CC-CCCSSCCEECCCCCCCCCCC--------CCHHHHHHHHTS--SCCEEEECC----CCHHHHHHHHHHHHHTTCCEEE
T ss_pred CC-CCcccccccccCcccCcccc--------cCHHHHHhhccC--CCeEEEccCccc-cchHHHHHHHHHHHHcCCeEEE
Confidence 87 77788888888877665433 455566677654 357999999875 4788899999999999999998
Q ss_pred EEcCCCCCCcccCCchhHHHHhCCCceEEcccChHHHhcCCCCCceeeccCchhHHHhhhcCCceeccccccchhhhHHH
Q 012212 309 VIRQDFMNGSRAKFPDGFIERVSNRGKIVEWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNY 388 (468)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~~~DQ~~na~r 388 (468)
+.... ...... .++|+++++|+||.++|.|. ++||||||+||++||+++|||+|++|+.+||+.||++
T Consensus 272 ~~~~~------~~~~~~----~~~nv~~~~~~p~~~~l~~~--~~~V~hgG~~t~~Eal~~GvP~v~~P~~~DQ~~na~~ 339 (401)
T d1iira_ 272 SRGWA------DLVLPD----DGADCFAIGEVNHQVLFGRV--AAVIHHGGAGTTHVAARAGAPQILLPQMADQPYYAGR 339 (401)
T ss_dssp CTTCT------TCCCSS----CGGGEEECSSCCHHHHGGGS--SEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHH
T ss_pred eccCC------cccccc----CCCCEEEEeccCHHHHHhhc--CEEEecCCchHHHHHHHhCCCEEEccccccHHHHHHH
Confidence 87644 111111 26788999999999999775 5599999999999999999999999999999999999
Q ss_pred HHHHhhceeEeeccCCCccCHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHH
Q 012212 389 ICEAWKIGLQFFADENGIITRQEIQRKVLTLLKNDDIRSNSLKLKEVARKSLLGGGSSFRNFESFISDIK 458 (468)
Q Consensus 389 v~~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 458 (468)
+++. |+|+.++..+ +|+++|+++|+++|+ ++|++||+++++++++. +..++++.+++.+.
T Consensus 340 l~~~-G~g~~l~~~~---~~~~~l~~ai~~~l~-~~~~~~a~~~~~~~~~~-----~~~~aa~~i~~~i~ 399 (401)
T d1iira_ 340 VAEL-GVGVAHDGPI---PTFDSLSAALATALT-PETHARATAVAGTIRTD-----GAAVAARLLLDAVS 399 (401)
T ss_dssp HHHH-TSEEECSSSS---CCHHHHHHHHHHHTS-HHHHHHHHHHHHHSCSC-----HHHHHHHHHHHHHH
T ss_pred HHHC-CCEEEcCcCC---CCHHHHHHHHHHHhC-HHHHHHHHHHHHHHHhc-----ChHHHHHHHHHHHh
Confidence 9995 9999999988 999999999999995 67999999999998762 23456666666654
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=100.00 E-value=6e-44 Score=345.59 Aligned_cols=381 Identities=14% Similarity=0.119 Sum_probs=258.3
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCCCCCCCcC-CCCCHHH
Q 012212 5 PHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDGLELQAA-DREDPLK 83 (468)
Q Consensus 5 ~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~ 83 (468)
|||+|.+.++.||++|+++||++|++|||+|||++++.+.+.+++. ++.++.++........ .......
T Consensus 1 mril~~~~gt~Ghi~P~laLA~~L~~rGh~V~~~~~~~~~~~v~~~----------g~~~~~~~~~~~~~~~~~~~~~~~ 70 (391)
T d1pn3a_ 1 MRVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAEV----------GVPMVPVGRAVRAGAREPGELPPG 70 (391)
T ss_dssp CEEEEEEESSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH----------TCCEEECSSCSSGGGSCTTCCCTT
T ss_pred CEEEEEcCCChhHHHHHHHHHHHHHHCCCEEEEEEChhhHhHHHHC----------CCeEEECCccHHHHhhChhhhhHH
Confidence 7999999999999999999999999999999999999999999884 4778888755433211 0111111
Q ss_pred HHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCcc---cHHHHHHHhCCceEEEcccchHHHHHHhhhhhHhhcCC
Q 012212 84 LGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVG---SALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGI 160 (468)
Q Consensus 84 ~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~---~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~ 160 (468)
....+.......++.+.+.+ .+||+||+|.+.. ++..+|+.+++|++.+...+..........+.......
T Consensus 71 ~~~~~~~~~~~~~~~l~~~~------~~~D~vi~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (391)
T d1pn3a_ 71 AAEVVTEVVAEWFDKVPAAI------EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSEQSQAERDMYNQG 144 (391)
T ss_dssp CGGGHHHHHHHHHHHHHHHH------TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGGSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHh------cCCCeEEEcccCchHHHHHHHHHHcCCceEEeeccccccccccccchhhHHHHH
Confidence 11112222333334444333 3499999998755 45668999999999988765432111100000000000
Q ss_pred CCCCCcccccCCcccccCCCccCcccccCcCCCCCChhHHHHHHHHHHHHHhhccccEEEEcCcccCChhhhccCCCcee
Q 012212 161 IDPNGFAILNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACDLIPNILP 240 (468)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~~~~~p~v~~ 240 (468)
.. . .....+..+.. ... . .... ........+..+....+.++.+ .+..++.++
T Consensus 145 ~~------~-----~~~~~~~~~~~-~~~-~-~~~~------------~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~ 197 (391)
T d1pn3a_ 145 AD------R-----LFGDAVNSHRA-SIG-L-PPVE------------HLYDYGYTDQPWLAADPVLSPL-RPTDLGTVQ 197 (391)
T ss_dssp HH------H-----HTHHHHHHHHH-TTS-C-CCCC------------CHHHHHHCSSCEECSCTTTSCC-CTTCCSCCB
T ss_pred HH------H-----HHHHHHHHHHH-Hhc-C-cccc------------cccccccccceeeccchhhhcc-CCCCCCeee
Confidence 00 0 00000000000 000 0 0000 0001123344556666777665 677788999
Q ss_pred eccccCCCCCCCCCCCCCCCCCchhhhhhcccCccEEEEEecccccC-CHHHHHHHHHHHHhCCCCEEEEEcCCCCCCcc
Q 012212 241 IGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVL-SQQQFAELALGLESLQKPFLWVIRQDFMNGSR 319 (468)
Q Consensus 241 vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~-~~~~~~~~~~a~~~~~~~~l~~~~~~~~~~~~ 319 (468)
+|++....... .+.++..|+.... ++||+++|+.... ...+...++.++...+.++++..... .
T Consensus 198 ~g~~~~~~~~~--------~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~----~- 262 (391)
T d1pn3a_ 198 TGAWILPDERP--------LSAELEAFLAAGS--TPVYVGFGSSSRPATADAAKMAIKAVRASGRRIVLSRGWA----D- 262 (391)
T ss_dssp CCCCCCCCCCC--------CCHHHHHHTTSSS--CCEEEECTTCCSTHHHHHHHHHHHHHHHTTCCEEEECTTT----T-
T ss_pred ecCcccCcccc--------CCHHHhhhhccCC--CeEEEeccccccccHHHHHHHHHHHHHhcCCEEEEecccc----c-
Confidence 99987765543 5666777776643 4799999987443 35667778889999999988876644 1
Q ss_pred cCCchhHHHHhCCCceEEcccChHHHhcCCCCCceeeccCchhHHHhhhcCCceeccccccc----hhhhHHHHHHHhhc
Q 012212 320 AKFPDGFIERVSNRGKIVEWAPQEKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSD----QYQNRNYICEAWKI 395 (468)
Q Consensus 320 ~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~~~D----Q~~na~rv~~~lG~ 395 (468)
... .. .++|+++.+|+||.++|+|.++ ||||||+||++||+++|||+|++|+.+| |+.||+++++. |+
T Consensus 263 ~~~-~~----~~~~v~i~~~~p~~~ll~~a~~--~v~hgG~~t~~Eal~~G~P~v~~P~~~d~~~eQ~~nA~~l~~~-G~ 334 (391)
T d1pn3a_ 263 LVL-PD----DGADCFVVGEVNLQELFGRVAA--AIHHDSAGTTLLAMRAGIPQIVVRRVVDNVVEQAYHADRVAEL-GV 334 (391)
T ss_dssp CCC-SS----CCTTCCEESSCCHHHHHTTSSC--EEEESCHHHHHHHHHHTCCEEEECSSCCBTTBCCHHHHHHHHH-TS
T ss_pred ccc-cc----CCCCEEEecccCHHHHHhhccE--EEecCchHHHHHHHHhCCcEEEeccccCCcchHHHHHHHHHHC-CC
Confidence 111 11 2688999999999999977655 9999999999999999999999999888 99999999995 99
Q ss_pred eeEeeccCCCccCHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhh
Q 012212 396 GLQFFADENGIITRQEIQRKVLTLLKNDDIRSNSLKLKEVARKSLLGGGSSFRNFESFISDIKML 460 (468)
Q Consensus 396 g~~l~~~~~~~~t~~~l~~ai~~~l~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 460 (468)
|+.++..+ +|+++|+++|+++|+ ++||+||++++++++. ++..++++.+.+.+...
T Consensus 335 g~~l~~~~---~~~~~l~~~i~~~l~-~~~r~~a~~~a~~~~~-----~g~~~aa~~i~~~l~~~ 390 (391)
T d1pn3a_ 335 GVAVDGPV---PTIDSLSAALDTALA-PEIRARATTVADTIRA-----DGTTVAAQLLFDAVSLE 390 (391)
T ss_dssp EEEECCSS---CCHHHHHHHHHHHTS-TTHHHHHHHHGGGSCS-----CHHHHHHHHHHHHHHHH
T ss_pred EEEcCcCC---CCHHHHHHHHHHHhC-HHHHHHHHHHHHHHHh-----cCHHHHHHHHHHHHHhc
Confidence 99999887 999999999999995 6799999999988754 35566667666666543
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=99.93 E-value=4.4e-25 Score=209.12 Aligned_cols=340 Identities=15% Similarity=0.095 Sum_probs=189.7
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcch--HHHHHhhhhhccCCCCCeEEEEcCCCCCCCcCCCCCHH
Q 012212 5 PHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIH--KKIIASLQEKAEDSSSQIKLVTIPDGLELQAADREDPL 82 (468)
Q Consensus 5 ~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~--~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 82 (468)
+||++.+.++.||+.|+++||++|.++||+|+|+++.... +.+.+ .++.+..++..... .....
T Consensus 1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~~~~~~~~~~~----------~~~~~~~~~~~~~~----~~~~~ 66 (351)
T d1f0ka_ 1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPK----------HGIEIDFIRISGLR----GKGIK 66 (351)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGG----------GTCEEEECCCCCCT----TCCHH
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeCCcchhhcccc----------cCCcEEEEECCCcC----CCCHH
Confidence 4899988764599999999999999999999999876432 33333 44666666532111 12222
Q ss_pred HHHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCc--ccHHHHHHHhCCceEEEcccchHHHHHHhhhhhHhhcCC
Q 012212 83 KLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTV--GSALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAGI 160 (468)
Q Consensus 83 ~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~--~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~ 160 (468)
......... ...+.....-+.+ .+||.++..... ..+...|..+++|++.+.+.........
T Consensus 67 ~~~~~~~~~-~~~~~~~~~i~~~----~~~~~~~~~~~~~~~~~~~~a~~~~ip~~~~~~~~~~~~~~~----------- 130 (351)
T d1f0ka_ 67 ALIAAPLRI-FNAWRQARAIMKA----YKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNGIAGLTNK----------- 130 (351)
T ss_dssp HHHTCHHHH-HHHHHHHHHHHHH----HCCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSSSCCHHHH-----------
T ss_pred HHHHHHHHH-HHhHHHHHHHhhc----cccceeeecccchhhhhhhhhhhcccceeecccccccchhHH-----------
Confidence 222222211 1122233333333 468888876433 3666789999999987653211000000
Q ss_pred CCCCCcccccCCcccccCCCccCcccccCcCCCCCChhHHHHHHHHHHHHHhhccccEEEEcCcccCChhhhccCCCcee
Q 012212 161 IDPNGFAILNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACDLIPNILP 240 (468)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~~~~~p~v~~ 240 (468)
. .....+.+.... .........
T Consensus 131 -----------------------------------------~---------~~~~~~~~~~~~--------~~~~~~~~~ 152 (351)
T d1f0ka_ 131 -----------------------------------------W---------LAKIATKVMQAF--------PGAFPNAEV 152 (351)
T ss_dssp -----------------------------------------H---------HTTTCSEEEESS--------TTSSSSCEE
T ss_pred -----------------------------------------H---------hhhhcceeeccc--------cccccceeE
Confidence 0 000111111111 111122223
Q ss_pred eccccCCCCCCCCCCCCCCCCCchhhhhhcccCccEEEEEecccccCCHHHHHHHHHHHHhCCCC-EEEEEcCCCCCCcc
Q 012212 241 IGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAELALGLESLQKP-FLWVIRQDFMNGSR 319 (468)
Q Consensus 241 vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~a~~~~~~~-~l~~~~~~~~~~~~ 319 (468)
+|+........ .+..... ......+.++++..||... ....+.+.+.+..+... ..+...+.. ..
T Consensus 153 ~~~~~~~~~~~--------~~~~~~~-~~~~~~~~~i~~~~gs~g~--~~~~~~~~~~~~~l~~~~~~i~~~~~~---~~ 218 (351)
T d1f0ka_ 153 VGNPVRTDVLA--------LPLPQQR-LAGREGPVRVLVVGGSQGA--RILNQTMPQVAAKLGDSVTIWHQSGKG---SQ 218 (351)
T ss_dssp CCCCCCHHHHT--------SCCHHHH-HTTCCSSEEEEEECTTTCC--HHHHHHHHHHHHHHGGGEEEEEECCTT---CH
T ss_pred EcCCccccccc--------chhHHhh-hhcccCCcccccccccchh--hhhHHHHHHhhhhhcccceeeeecccc---ch
Confidence 33222111000 1111111 1222334467777777642 22233344444433333 233332220 00
Q ss_pred cCCchhHHHHhCCCceEEcccCh-HHHhcCCCCCceeeccCchhHHHhhhcCCceeccccc---cchhhhHHHHHHHhhc
Q 012212 320 AKFPDGFIERVSNRGKIVEWAPQ-EKVLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYF---SDQYQNRNYICEAWKI 395 (468)
Q Consensus 320 ~~~~~~~~~~~~~nv~~~~~~p~-~~ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~~---~DQ~~na~rv~~~lG~ 395 (468)
........+....|+.+.+|.++ .++|..+ +++|||||.+|++|++++|+|+|++|+. .||..||.++++. |+
T Consensus 219 ~~~~~~~~~~~~~~~~v~~f~~~~~~lm~~a--dl~It~~G~~T~~Eal~~g~P~I~iP~~~~~~~Q~~NA~~l~~~-G~ 295 (351)
T d1f0ka_ 219 QSVEQAYAEAGQPQHKVTEFIDDMAAAYAWA--DVVVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKA-GA 295 (351)
T ss_dssp HHHHHHHHHTTCTTSEEESCCSCHHHHHHHC--SEEEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHT-TS
T ss_pred hhhhhhhcccccccceeeeehhhHHHHHHhC--chhhccccchHHHHHHHhCCceeeeecccCCchHHHHHHHHHHC-CC
Confidence 00001111234678899999875 5688555 5599999999999999999999999974 4899999999995 99
Q ss_pred eeEeeccCCCccCHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHh
Q 012212 396 GLQFFADENGIITRQEIQRKVLTLLKNDDIRSNSLKLKEVARKSLLGGGSSFRNFESFISDIKM 459 (468)
Q Consensus 396 g~~l~~~~~~~~t~~~l~~ai~~~l~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 459 (468)
|+.++.++ ++.+.|.+++..+. + ++..++++.+++. . ...+.+.+.+.|+++.+
T Consensus 296 ~~~~~~~~---~~~e~l~~~l~~l~--~---~~~~~~~~~~~~~-~-~~~~a~~i~~~i~~l~~ 349 (351)
T d1f0ka_ 296 AKIIEQPQ---LSVDAVANTLAGWS--R---ETLLTMAERARAA-S-IPDATERVANEVSRVAR 349 (351)
T ss_dssp EEECCGGG---CCHHHHHHHHHTCC--H---HHHHHHHHHHHHT-C-CTTHHHHHHHHHHHHHT
T ss_pred EEEechhh---CCHHHHHHHHHhhC--H---HHHHHHHHHHHcc-C-CccHHHHHHHHHHHHHh
Confidence 99998877 99999999998763 2 3455566666653 1 22334556666665544
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.17 E-value=2e-09 Score=103.14 Aligned_cols=113 Identities=19% Similarity=0.126 Sum_probs=73.4
Q ss_pred CCCceEEcccChHH---HhcCCCCCceeec----cCchhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeeccC
Q 012212 331 SNRGKIVEWAPQEK---VLGHSSVACFISH----CGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADE 403 (468)
Q Consensus 331 ~~nv~~~~~~p~~~---ll~~~~~~~~I~h----GG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~~ 403 (468)
+.++.+.+++|+.+ ++..+++ ++.- |...++.||+++|+|+|+... ......++ . +.|..++.
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~~adi--~v~~s~~e~~~~~~~Eama~G~Pvi~~~~----g~~~e~i~-~-~~G~~~~~-- 377 (437)
T d2bisa1 308 GNVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDIIT-N-ETGILVKA-- 377 (437)
T ss_dssp TTEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHTTTCEEEEESC----TTHHHHCC-T-TTCEEECT--
T ss_pred ccceeccccCcHHHHHHHHhhhcc--ccccccccccchHHHHHHHCCCCEEEeCC----CCcHHhEE-C-CcEEEECC--
Confidence 34445558888754 5555554 6543 345699999999999998743 34444444 3 67887776
Q ss_pred CCccCHHHHHHHHHHHhc-ChH----HHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhhcccC
Q 012212 404 NGIITRQEIQRKVLTLLK-NDD----IRSNSLKLKEVARKSLLGGGSSFRNFESFISDIKMLISGC 464 (468)
Q Consensus 404 ~~~~t~~~l~~ai~~~l~-~~~----~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 464 (468)
-+.++++++|.++|+ |++ +.+++++.++.+ +-.+.++++++..++.+.+-
T Consensus 378 ---~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~--------s~~~~a~~~~~iY~~~i~r~ 432 (437)
T d2bisa1 378 ---GDPGELANAILKALELSRSDLSKFRENCKKRAMSF--------SWEKSAERYVKAYTGSIDRA 432 (437)
T ss_dssp ---TCHHHHHHHHHHHHTTTTSCTHHHHHHHHHHHHHS--------CHHHHHHHHHHHHHTCSCCB
T ss_pred ---CCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhC--------CHHHHHHHHHHHHHHHHHhH
Confidence 469999999999986 555 444444444332 44566677777766665443
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Probab=99.07 E-value=5.4e-08 Score=90.21 Aligned_cols=159 Identities=13% Similarity=0.150 Sum_probs=95.9
Q ss_pred cEEEEEecccccCCHHHHHHHHHHHHhCCC----CEEEEEcCCCCCCcccCCchhHH---HHh--CCCceEEcccCh-HH
Q 012212 275 SVVYVAFGSVAVLSQQQFAELALGLESLQK----PFLWVIRQDFMNGSRAKFPDGFI---ERV--SNRGKIVEWAPQ-EK 344 (468)
Q Consensus 275 ~vv~vs~Gs~~~~~~~~~~~~~~a~~~~~~----~~l~~~~~~~~~~~~~~~~~~~~---~~~--~~nv~~~~~~p~-~~ 344 (468)
..+++..|+.. +..-+..+++++..+.. ..++.+.+. ..+..+. ++. .+++++.++..+ ..
T Consensus 195 ~~~i~~~gr~~--~~Kg~~~li~a~~~l~~~~~~~~~~ii~g~-------~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~ 265 (370)
T d2iw1a1 195 QNLLLQVGSDF--GRKGVDRSIEALASLPESLRHNTLLFVVGQ-------DKPRKFEALAEKLGVRSNVHFFSGRNDVSE 265 (370)
T ss_dssp CEEEEEECSCT--TTTTHHHHHHHHHTSCHHHHHTEEEEEESS-------SCCHHHHHHHHHHTCGGGEEEESCCSCHHH
T ss_pred ceEEEEEeccc--cccchhhhcccccccccccccceeeecccc-------cccccccccccccccccccccccccccccc
Confidence 35666778764 23345667777765532 233333333 1122222 222 456777776654 56
Q ss_pred HhcCCCCCceee--c--cCchhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeeccCCCccCHHHHHHHHHHHh
Q 012212 345 VLGHSSVACFIS--H--CGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGIITRQEIQRKVLTLL 420 (468)
Q Consensus 345 ll~~~~~~~~I~--h--GG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l 420 (468)
++..+++ +|. + |-.+++.||+++|+|+|+. |.......+.+. +.|..+... -+.++++++|.+++
T Consensus 266 ~~~~adv--~v~ps~~E~~~~~~~EAma~G~PvI~s----~~~g~~e~i~~~-~~G~l~~~~----~d~~~la~~i~~ll 334 (370)
T d2iw1a1 266 LMAAADL--LLHPAYQEAAGIVLLEAITAGLPVLTT----AVCGYAHYIADA-NCGTVIAEP----FSQEQLNEVLRKAL 334 (370)
T ss_dssp HHHHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEE----TTSTTTHHHHHH-TCEEEECSS----CCHHHHHHHHHHHH
T ss_pred ccccccc--cccccccccccceeeecccCCeeEEEe----CCCChHHHhcCC-CceEEEcCC----CCHHHHHHHHHHHH
Confidence 8877766 664 2 3457899999999999987 445566677775 778766432 47899999999999
Q ss_pred cChHHHHHHHHHHHHHHHHhcCCCchHHHHHHHH
Q 012212 421 KNDDIRSNSLKLKEVARKSLLGGGSSFRNFESFI 454 (468)
Q Consensus 421 ~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~ 454 (468)
+|++.+++..+-+.++.+. -+--+..+.+.+++
T Consensus 335 ~d~~~~~~~~~~ar~~~~~-~~~~~~~~~~~~ii 367 (370)
T d2iw1a1 335 TQSPLRMAWAENARHYADT-QDLYSLPEKAADII 367 (370)
T ss_dssp HCHHHHHHHHHHHHHHHHH-SCCSCHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHH-hChhHHHHHHHHHH
Confidence 9998765554444433332 11123344555544
|
| >d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Thermus thermophilus [TaxId: 274]
Probab=98.81 E-value=1e-07 Score=88.68 Aligned_cols=326 Identities=13% Similarity=0.033 Sum_probs=174.2
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHH-CCCEEEEEECCcchHHHHHhhhhhccCCCCCeEE-EEcCCCCCCCcCCCCCH
Q 012212 4 QPHVLVIPYPAQGHVAPLMKLATKIAE-RAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKL-VTIPDGLELQAADREDP 81 (468)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~~~LA~~L~~-rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~~~ 81 (468)
|+||+++. +++..+.-+.+|.++|.+ .+.++.++.++...+...+.... .++.. ..+.. .. ....+
T Consensus 2 MkkI~~v~-GtR~e~~kl~pli~~l~~~~~~~~~li~tG~H~~~~~~~~~~------~~i~~d~~l~~----~~-~~~s~ 69 (373)
T d1v4va_ 2 MKRVVLAF-GTRPEATKMAPVYLALRGIPGLKPLVLLTGQHREQLRQALSL------FGIQEDRNLDV----MQ-ERQAL 69 (373)
T ss_dssp CEEEEEEE-CSHHHHHHHHHHHHHHHTSTTEEEEEEECSSCHHHHHHHHHT------TTCCCSEECCC----CS-SCCCH
T ss_pred CCeEEEEE-EhhHHHHHHHHHHHHHHhCCCCCEEEEEccCChhhhhCcchh------cCCCccccCCC----CC-CCCCH
Confidence 45787665 778999999999999986 47999988888776544332111 12211 01111 10 11222
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEe--cCCcc-cHHHHHHHhCCceEEEcccchHHHHHHhhhhhHhhc
Q 012212 82 LKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIA--DVTVG-SALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEA 158 (468)
Q Consensus 82 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~--D~~~~-~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~ 158 (468)
... ...+-..+.+++.. .+||+|++ |.+.. +++.+|..++||.+.+.-+.
T Consensus 70 ~~~----~~~~~~~~~~~l~~-------~kPD~vlv~GDr~e~la~a~aa~~~~ipi~HiegG~---------------- 122 (373)
T d1v4va_ 70 PDL----AARILPQAARALKE-------MGADYVLVHGDTLTTFAVAWAAFLEGIPVGHVEAGL---------------- 122 (373)
T ss_dssp HHH----HHHHHHHHHHHHHH-------TTCSEEEEESSCHHHHHHHHHHHHTTCCEEEETCCC----------------
T ss_pred HHH----HHHHHHHHhhhhhh-------cCcccccccccCccchhHHHHHHHhhhhheeecccc----------------
Confidence 222 22233345566666 56998775 44333 66778999999998865311
Q ss_pred CCCCCCCcccccCCcccccCCCccCcccccCcCCCCCChhHHHHHHHHHHHHHhhccccEEEEcCcccCChhhhcc---C
Q 012212 159 GIIDPNGFAILNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPACDL---I 235 (468)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~~~~---~ 235 (468)
.... ...+. + ....++.. ..-++++++.+...-+.- ... .
T Consensus 123 --rsg~-----------~~~~~--------~------de~~R~~i---------skls~~hf~~t~~~~~~L-~~~Ge~~ 165 (373)
T d1v4va_ 123 --RSGN-----------LKEPF--------P------EEANRRLT---------DVLTDLDFAPTPLAKANL-LKEGKRE 165 (373)
T ss_dssp --CCSC-----------TTSST--------T------HHHHHHHH---------HHHCSEEEESSHHHHHHH-HTTTCCG
T ss_pred --cccc-----------cccCc--------c------hhhhhhhh---------ccccceeeecchhhhhhh-hhhcccc
Confidence 1100 00000 0 00001111 113455555554433322 111 2
Q ss_pred CCceeeccccCCCCCCCCCCCCCCCCCchhhhhhcccCccEEEEEeccccc-CCHHHHHHHHHHHHhCCCCEEEEEcCCC
Q 012212 236 PNILPIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAV-LSQQQFAELALGLESLQKPFLWVIRQDF 314 (468)
Q Consensus 236 p~v~~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~-~~~~~~~~~~~a~~~~~~~~l~~~~~~~ 314 (468)
.+++.+|....+.-.. ...+..........+.+++++-.... ...+.+..++..+......+.+......
T Consensus 166 ~~I~~vG~p~~D~i~~---------~~~~~~~~~~~~~~~~~lvt~hr~~n~~~~~~~~~~~~~~~~~~~~~~~i~p~~~ 236 (373)
T d1v4va_ 166 EGILVTGQTGVDAVLL---------AAKLGRLPEGLPEGPYVTVTMHRRENWPLLSDLAQALKRVAEAFPHLTFVYPVHL 236 (373)
T ss_dssp GGEEECCCHHHHHHHH---------HHHHCCCCTTCCSSCEEEECCCCGGGGGGHHHHHHHHHHHHHHCTTSEEEEECCS
T ss_pred cceeecccchhhHHHh---------hhhhcccccccccccceeEEeccccccchHHHHHHHHHHHhhhcccceeeeeecc
Confidence 3666677432221000 00000000111234578888875532 2234455556666554444333333220
Q ss_pred CCCcccCCchhHHH--HhCCCceEEcccChHH---HhcCCCCCceeeccCchhHHHhhhcCCceeccccccchhhhHHHH
Q 012212 315 MNGSRAKFPDGFIE--RVSNRGKIVEWAPQEK---VLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYI 389 (468)
Q Consensus 315 ~~~~~~~~~~~~~~--~~~~nv~~~~~~p~~~---ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv 389 (468)
.........+ +..+|+.++.-+++.. ++.++.+ +|+.+|.+ ..||-++|+|.|.+....|.+.. .
T Consensus 237 ----~~~~~~~~~~~~~~~~n~~~~~~l~~~~~l~ll~~s~~--vignSssg-i~Ea~~lg~P~Inir~~~eRqeg-~-- 306 (373)
T d1v4va_ 237 ----NPVVREAVFPVLKGVRNFVLLDPLEYGSMAALMRASLL--LVTDSGGL-QEEGAALGVPVVVLRNVTERPEG-L-- 306 (373)
T ss_dssp ----CHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTEEE--EEESCHHH-HHHHHHTTCCEEECSSSCSCHHH-H--
T ss_pred ----cccchhhhhhhhcccccceeeccchHHHHHHHhhhcee--Eecccchh-hhcchhhcCcEEEeCCCccCHHH-H--
Confidence 0001011111 2257888887777655 5766655 99998876 67999999999999765554443 1
Q ss_pred HHHhhceeEeeccCCCccCHHHHHHHHHHHhcChHHHHHHHHH
Q 012212 390 CEAWKIGLQFFADENGIITRQEIQRKVLTLLKNDDIRSNSLKL 432 (468)
Q Consensus 390 ~~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~~~~r~~a~~l 432 (468)
++ |.-+.+. .+.+++.++|.++|++++++++....
T Consensus 307 -~~-g~nvlv~------~d~~~I~~~i~~~l~~~~~~~~~~~~ 341 (373)
T d1v4va_ 307 -KA-GILKLAG------TDPEGVYRVVKGLLENPEELSRMRKA 341 (373)
T ss_dssp -HH-TSEEECC------SCHHHHHHHHHHHHTCHHHHHHHHHS
T ss_pred -hc-CeeEEcC------CCHHHHHHHHHHHHcCHHHHhhcccC
Confidence 23 6555432 57899999999999999988765553
|
| >d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Bacillus subtilis [TaxId: 1423]
Probab=98.79 E-value=7.1e-08 Score=89.87 Aligned_cols=351 Identities=13% Similarity=0.077 Sum_probs=180.4
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHHC-CCEEEEEECCcchHHHHHhhhhhccCCCCCeEE-EEcCCCCCCCcCCCCC
Q 012212 3 RQPHVLVIPYPAQGHVAPLMKLATKIAER-AIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKL-VTIPDGLELQAADRED 80 (468)
Q Consensus 3 ~~~~Il~~~~~~~GH~~p~~~LA~~L~~r-GH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~~ 80 (468)
++|||+++. +++..+.-+.+|.++|.++ +.++.++.++...+........ -++.. ..+. ... ....
T Consensus 1 ~k~Ki~~v~-GtR~e~~kl~pli~~l~~~~~~~~~li~tG~H~~~~~~~~~~------~~i~~~~~~~--~~~---~~~~ 68 (377)
T d1o6ca_ 1 KKLKVMTVF-GTRPEAIKMAPLVLELKKYPEIDSYVTVTAQHRQMLDQVLDA------FHIKPDFDLN--IMK---ERQT 68 (377)
T ss_dssp CCEEEEEEE-CSHHHHHHHHHHHHHGGGCTTEEEEEEECCSCGGGTHHHHHH------TTCCCSEECC--CCC---TTCC
T ss_pred CCceEEEEE-EchHhHHHHHHHHHHHHhCCCCCEEEEEeCCCHHHHHHHHhh------cCCCCceeee--cCC---CCCC
Confidence 467988887 8889999999999999986 5788888888764322221111 11110 1111 000 1112
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecC--Ccc-cHHHHHHHhCCceEEEcccchHHHHHHhhhhhHhh
Q 012212 81 PLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADV--TVG-SALEVAESMGIARAAVVPFGPGSLALSLQFPKLLE 157 (468)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~--~~~-~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~ 157 (468)
+.. . ....-..+.+++.. .+||+||+=. ... +++.+|..++||.+.+..
T Consensus 69 ~~~---~-~~~~i~~~~~~~~~-------~kpD~v~v~GDr~e~la~a~aa~~~~Ipi~Hieg----------------- 120 (377)
T d1o6ca_ 69 LAE---I-TSNALVRLDELFKD-------IKPDIVLVHGDTTTTFAGSLAAFYHQIAVGHVEA----------------- 120 (377)
T ss_dssp HHH---H-HHHHHHHHHHHHHH-------HCCSEEEEETTCHHHHHHHHHHHHTTCEEEEESC-----------------
T ss_pred HHH---H-HHHHHHhhhhhhhh-------cccceeEeeecccccchhhhhhhhccceEEEEec-----------------
Confidence 212 1 22233335566666 4599866543 333 677899999999988653
Q ss_pred cCCCCCCCcccccCCcccccCCCccCcccccCcCCCCCChhHHHHHHHHHHHHHhhccccEEEEcCcccCChhhh-c-cC
Q 012212 158 AGIIDPNGFAILNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPAC-D-LI 235 (468)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~~-~-~~ 235 (468)
|..... ...+ .+ ....++.. ..-++++++.+....+.-.. - -.
T Consensus 121 -G~~s~~-----------~~~~--------~~------de~~R~~i---------skls~~hf~~t~~~~~~L~~~G~~~ 165 (377)
T d1o6ca_ 121 -GLRTGN-----------KYSP--------FP------EELNRQMT---------GAIADLHFAPTGQAKDNLLKENKKA 165 (377)
T ss_dssp -CCCCSC-----------TTTT--------TT------HHHHHHHH---------HHHCSEEEESSHHHHHHHHHTTCCG
T ss_pred -cccccc-----------cccc--------Cc------hhhhcccc---------ccceeEEeecchhhhhhhhhhcccc
Confidence 111100 0000 00 00001111 12356666666554433211 1 12
Q ss_pred CCceeeccccCCCCCCCCCCCCCCCCCchhhhhhcccCccEEEEEecccccCC---HHHHHHHHHHHHhCCCCEEEEEcC
Q 012212 236 PNILPIGPLLASNHSGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLS---QQQFAELALGLESLQKPFLWVIRQ 312 (468)
Q Consensus 236 p~v~~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~---~~~~~~~~~a~~~~~~~~l~~~~~ 312 (468)
.+++.||....+.-...... ........++ ...+.+++++-...... ...+..+...+..... +.+....
T Consensus 166 ~~I~~vG~~~~D~i~~~~~~---~~~~~~~~~~---~~~~~ilvt~Hr~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~ 238 (377)
T d1o6ca_ 166 DSIFVTGNTAIDALNTTVRD---GYSHPVLDQV---GEDKMILLTAHRRENLGEPMENMFKAIRRIVGEFED-VQVVYPV 238 (377)
T ss_dssp GGEEECCCHHHHHHHHHCCS---SCCCSTTTTT---TTSEEEEECC----------HHHHHHHHHHHHHCTT-EEEEEC-
T ss_pred ceEeeccchhHHHHHHHHHH---HHhhhhhhhc---cCCceEEEEeccccccccchHHHHHHHHhhcccccc-ccccccc
Confidence 36777775433210000000 0011111112 23347788776443222 2334445555554433 3333322
Q ss_pred CCCCCcccCCchhHHH--HhCCCceEEcccChHH---HhcCCCCCceeeccCchhHHHhhhcCCceeccccccchhhhHH
Q 012212 313 DFMNGSRAKFPDGFIE--RVSNRGKIVEWAPQEK---VLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQYQNRN 387 (468)
Q Consensus 313 ~~~~~~~~~~~~~~~~--~~~~nv~~~~~~p~~~---ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~~~DQ~~na~ 387 (468)
. .....-....+ ...+|+++.+.+++.+ +|.++++ +|+.+|.+ ..||-+.|+|.|.+.-..|++..
T Consensus 239 ~----~~~~~~~~~~~~~~~~~ni~~~~~l~~~~fl~llk~s~~--vIgnSss~-i~Ea~~lg~P~Inir~~tERqe~-- 309 (377)
T d1o6ca_ 239 H----LNPVVREAAHKHFGDSDRVHLIEPLEVIDFHNFAAKSHF--ILTDSGGV-QEEAPSLGKPVLVLRDTTERPEG-- 309 (377)
T ss_dssp -------CHHHHHHHHC--CCSSEEECCCCCHHHHHHHHHHCSE--EEEC--CH-HHHGGGGTCCEEEECSCCC---C--
T ss_pred c----cccccchhhhhccccccceEeccccchHHHHHHHhhhhe--eecccchh-HHhhhhhhceEEEeCCCCcCcch--
Confidence 2 00001111111 1257899998888755 6778877 99999998 77999999999999765555542
Q ss_pred HHHHHhhceeEeeccCCCccCHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHH
Q 012212 388 YICEAWKIGLQFFADENGIITRQEIQRKVLTLLKNDDIRSNSLKLKEVARKSLLGGGSSFRNFESFISDI 457 (468)
Q Consensus 388 rv~~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 457 (468)
+ +. |.-+.++ .+.+++.+++.++++++.++++......- +.+|+++.+-++.|++.+
T Consensus 310 -~-~~-g~nilv~------~~~~~I~~~i~~~l~~~~~~~~~~~~~np----YGdG~as~rI~~~L~~~~ 366 (377)
T d1o6ca_ 310 -V-EA-GTLKLAG------TDEENIYQLAKQLLTDPDEYKKMSQASNP----YGDGEASRRIVEELLFHY 366 (377)
T ss_dssp -T-TT-TSSEEEC------SCHHHHHHHHHHHHHCHHHHHHHHHCCCT----TCCSCHHHHHHHHHHHHT
T ss_pred -h-hc-CeeEECC------CCHHHHHHHHHHHHhChHHHhhhccCCCC----CCCChHHHHHHHHHHHhh
Confidence 1 33 6555443 57899999999999998887766554322 234566655565565543
|
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=98.70 E-value=2.4e-06 Score=82.26 Aligned_cols=136 Identities=11% Similarity=0.079 Sum_probs=80.0
Q ss_pred EEEEEeccccc-CCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCcccCCch---hHHHHhCCCceEEcccChHH---HhcC
Q 012212 276 VVYVAFGSVAV-LSQQQFAELALGLESLQKPFLWVIRQDFMNGSRAKFPD---GFIERVSNRGKIVEWAPQEK---VLGH 348 (468)
Q Consensus 276 vv~vs~Gs~~~-~~~~~~~~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~nv~~~~~~p~~~---ll~~ 348 (468)
.+++..|.... -..+.+...+..+.+.+.++++...+. . .... ....+.++++++..+.+... +++.
T Consensus 292 ~~i~~vgrl~~~KG~~~Ll~a~~~~~~~~~~l~~~G~G~----~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 365 (477)
T d1rzua_ 292 PLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGD----V--ALEGALLAAASRHHGRVGVAIGYNEPLSHLMQAG 365 (477)
T ss_dssp CEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEEECBC----H--HHHHHHHHHHHHTTTTEEEEESCCHHHHHHHHHH
T ss_pred cEEEEEeeeeecCCcHHHHHHHHHHHhhCCeEEEEecCC----c--hHHHHHHHHHhhcCCeEEEEcccChhHHHHHHHh
Confidence 45566787632 223333333333344566776665443 1 1111 12234578898887666533 4434
Q ss_pred CCCCceeecc---Cc-hhHHHhhhcCCceeccccccchhhhHHHHH---------HHhhceeEeeccCCCccCHHHHHHH
Q 012212 349 SSVACFISHC---GW-NSTMEGLSMGVPFLCWPYFSDQYQNRNYIC---------EAWKIGLQFFADENGIITRQEIQRK 415 (468)
Q Consensus 349 ~~~~~~I~hG---G~-~s~~eal~~GvP~v~~P~~~DQ~~na~rv~---------~~lG~g~~l~~~~~~~~t~~~l~~a 415 (468)
+ +++|.-. |. .+++||+++|+|+|+. |+......+. .. +.|..++. -+.+++.++
T Consensus 366 a--D~~v~PS~~E~fglv~lEAma~G~PvVas----~~GG~~E~v~d~~~~~~~~~~-~~G~l~~~-----~d~~~la~a 433 (477)
T d1rzua_ 366 C--DAIIIPSRFEPCGLTQLYALRYGCIPVVA----RTGGLADTVIDANHAALASKA-ATGVQFSP-----VTLDGLKQA 433 (477)
T ss_dssp C--SEEEECCSCCSSCSHHHHHHHHTCEEEEE----SSHHHHHHCCBCCHHHHHTTC-CCBEEESS-----CSHHHHHHH
T ss_pred C--ccccCCccccCCCHHHHHHHHcCCCEEEc----CCCCCcceeecCCccccccCC-CceEEeCC-----CCHHHHHHH
Confidence 4 4588766 33 4788999999999987 4434443332 21 46777766 579999999
Q ss_pred HHHHhc---ChHHHHHH
Q 012212 416 VLTLLK---NDDIRSNS 429 (468)
Q Consensus 416 i~~~l~---~~~~r~~a 429 (468)
|+++|+ |++.++++
T Consensus 434 i~~~l~~~~~~~~~~~~ 450 (477)
T d1rzua_ 434 IRRTVRYYHDPKLWTQM 450 (477)
T ss_dssp HHHHHHHHTCHHHHHHH
T ss_pred HHHHHhhhCCHHHHHHH
Confidence 998875 55544433
|
| >d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Escherichia coli [TaxId: 562]
Probab=98.52 E-value=6.3e-06 Score=76.21 Aligned_cols=332 Identities=11% Similarity=0.059 Sum_probs=175.2
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHHC-CCEEEEEECCcchHHHHHhhhhhccCCCCCeEE-EEcCCCCCCCcCCCCCHH
Q 012212 5 PHVLVIPYPAQGHVAPLMKLATKIAER-AIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKL-VTIPDGLELQAADREDPL 82 (468)
Q Consensus 5 ~~Il~~~~~~~GH~~p~~~LA~~L~~r-GH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~~~~ 82 (468)
|||+++. +++..+.-+.+|.++|.+. +.++.++.++...+........ .++.. ..+... . ....+.
T Consensus 1 MKi~~v~-GtR~e~~kl~pli~~l~~~~~~~~~li~tG~H~~~~~~~~~~------~~~~~~~~~~~~--~---~~~~~~ 68 (376)
T d1f6da_ 1 MKVLTVF-GTRPEAIKMAPLVHALAKDPFFEAKVCVTAQHREMLDQVLKL------FSIVPDYDLNIM--Q---PGQGLT 68 (376)
T ss_dssp CEEEEEE-CSHHHHHHHHHHHHHHHHCTTCEEEEEECCTTGGGGHHHHHH------TTCCCSEECCCC--S---SSSCHH
T ss_pred CeEEEEE-EhhHhHHHHHHHHHHHHhCCCCCEEEEEcCCCHHHHHHHHHh------cCCCCCcccccC--C---CCCCHH
Confidence 6888887 8899999999999999886 6899999888764433221111 11110 111100 0 111222
Q ss_pred HHHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecC--Ccc-cHHHHHHHhCCceEEEcccchHHHHHHhhhhhHhhcC
Q 012212 83 KLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADV--TVG-SALEVAESMGIARAAVVPFGPGSLALSLQFPKLLEAG 159 (468)
Q Consensus 83 ~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~--~~~-~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~ 159 (468)
.. . ...-..+.+++.+ .+||+|++=. ... +++.+|..++||++-+.. |
T Consensus 69 ~~---~-~~~i~~~~~~~~~-------~kPD~v~v~GDr~e~la~a~aa~~~~ipi~Hieg------------------G 119 (376)
T d1f6da_ 69 EI---T-CRILEGLKPILAE-------FKPDVVLVHGDTTTTLATSLAAFYQRIPVGHVEA------------------G 119 (376)
T ss_dssp HH---H-HHHHHHHHHHHHH-------HCCSEEEEETTCHHHHHHHHHHHTTTCCEEEESC------------------C
T ss_pred HH---H-HHHHHhhHHHHHh-------ccCcceeeeccccchhhHHHHHHhhCceEEEEec------------------c
Confidence 22 1 2222235555555 4588866643 333 777789999999988753 1
Q ss_pred CCCCCCcccccCCcccccCCCccCcccccCcCCCCCChhHHHHHHHHHHHHHhhccccEEEEcCcccCChhhh--ccCCC
Q 012212 160 IIDPNGFAILNDGLISLSDEIPAWKRNEYTWSFPDEPSEQKILLGIICAVIQAVKISNWIINNSVYELDSPAC--DLIPN 237 (468)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~~--~~~p~ 237 (468)
..... ...+ .+ . ...++.. ..-++++++.+...-+.-.. .-..+
T Consensus 120 ~~s~~-----------~~~~--------~p----d--e~~R~~i---------skls~~hf~~~~~~~~~L~~~G~~~~~ 165 (376)
T d1f6da_ 120 LRTGD-----------LYSP--------WP----E--EANRTLT---------GHLAMYHFSPTETSRQNLLRENVADSR 165 (376)
T ss_dssp CCCSC-----------TTSS--------TT----H--HHHHHHH---------HHTCSEEEESSHHHHHHHHHTTCCGGG
T ss_pred ccccc-----------cccc--------Cc----h--hhhhhhh---------ccceeEEEeccHHHHhHHHhcCCCccc
Confidence 11100 0000 00 0 0001111 12456666666544332211 11246
Q ss_pred ceeeccccCCCC------CCCCCCCCCCCCCchhhhhhcccCccEEEEEecccccCCHHHHHHH---HHHHHhCCCCEEE
Q 012212 238 ILPIGPLLASNH------SGDLDGNFWSEDSSCLSWLDEQAIRSVVYVAFGSVAVLSQQQFAEL---ALGLESLQKPFLW 308 (468)
Q Consensus 238 v~~vGpl~~~~~------~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~---~~a~~~~~~~~l~ 308 (468)
++.||....+.- ... .. .-....+.+.......++.|++++=....... .++.+ +..+......+.+
T Consensus 166 I~~vG~~~~D~l~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~ilvt~H~~~~~~~-~~~~i~~~l~~~~~~~~~~~i 241 (376)
T d1f6da_ 166 IFITGNTVIDALLWVRDQVMS--SD-KLRSELAANYPFIDPDKKMILVTGHRRESFGR-GFEEICHALADIATTHQDIQI 241 (376)
T ss_dssp EEECCCHHHHHHHHHHHHTTT--CH-HHHHHHHTTCTTCCTTSEEEEECCCCBSSCCH-HHHHHHHHHHHHHHHCTTEEE
T ss_pred cceecCchHHHHHHHHhhhhc--cc-hhhhhhhccccccCCCCceEEEecccchhhhh-hHHHHHHHHhhhhhhcceeEE
Confidence 777886443210 000 00 00000000111111234578888765443333 33443 4444444555555
Q ss_pred EEcCCCCCCcccCCchhHHH--HhCCCceEEcccChHH---HhcCCCCCceeeccCchhHHHhhhcCCceeccccccchh
Q 012212 309 VIRQDFMNGSRAKFPDGFIE--RVSNRGKIVEWAPQEK---VLGHSSVACFISHCGWNSTMEGLSMGVPFLCWPYFSDQY 383 (468)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~--~~~~nv~~~~~~p~~~---ll~~~~~~~~I~hGG~~s~~eal~~GvP~v~~P~~~DQ~ 383 (468)
..... ..........+ ...+|+++++-+++.. ++.++.+ +|+..|.| ..||-+.|+|.|.+.-..+|+
T Consensus 242 i~p~~----~~~~~~~~~~~~~~~~~ni~~~~~l~~~~fl~ll~~a~~--vignSssg-i~Ea~~lg~P~Inir~~ter~ 314 (376)
T d1f6da_ 242 VYPVH----LNPNVREPVNRILGHVKNVILIDPQEYLPFVWLMNHAWL--ILTDSGGI-QEEAPSLGKPVLVMRDTTERP 314 (376)
T ss_dssp EEECC----BCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHCSE--EEESSSGG-GGTGGGGTCCEEECSSCCSCH
T ss_pred ecccc----cchhhhhhHhhhhcccccceeeccccHHHHHHHHhhceE--EEecCcch-HhhHHHhCCCEEEcCCCccCc
Confidence 54433 00011111111 1257888887676654 7888877 99998876 779999999999886555555
Q ss_pred hhHHHHHHHhhceeEeeccCCCccCHHHHHHHHHHHhcChHHHHHHHHHH
Q 012212 384 QNRNYICEAWKIGLQFFADENGIITRQEIQRKVLTLLKNDDIRSNSLKLK 433 (468)
Q Consensus 384 ~na~rv~~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~~~~r~~a~~l~ 433 (468)
. +++ + |.-+.++ .+.+++.+++.+++.++..+++..+..
T Consensus 315 ~---~~~-~-g~~i~v~------~~~~~I~~ai~~~l~~~~~~~~~~~~~ 353 (376)
T d1f6da_ 315 E---AVT-A-GTVRLVG------TDKQRIVEEVTRLLKDENEYQAMSRAH 353 (376)
T ss_dssp H---HHH-H-TSEEECC------SSHHHHHHHHHHHHHCHHHHHHHHHSC
T ss_pred c---cee-c-CeeEECC------CCHHHHHHHHHHHHhChHhhhhhccCC
Confidence 3 443 2 5444432 578999999999999887776555443
|
| >d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: First mannosyl transferase WbaZ species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=98.29 E-value=9.2e-07 Score=72.00 Aligned_cols=142 Identities=11% Similarity=0.152 Sum_probs=86.7
Q ss_pred EEEecccccCCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCcccCCchhHHHHhCCCceEEcccChHH---HhcCCCCCce
Q 012212 278 YVAFGSVAVLSQQQFAELALGLESLQKPFLWVIRQDFMNGSRAKFPDGFIERVSNRGKIVEWAPQEK---VLGHSSVACF 354 (468)
Q Consensus 278 ~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~---ll~~~~~~~~ 354 (468)
++..|... +..-+..+++++.+++..-++.++...+......+-..+.+...+|+++.+|+|+.+ ++..+++ +
T Consensus 15 ~l~iGrl~--~~K~~~~~i~a~~~l~~~~l~ivg~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~ 90 (166)
T d2f9fa1 15 WLSVNRIY--PEKRIELQLEVFKKLQDEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSRCKG--L 90 (166)
T ss_dssp EEEECCSS--GGGTHHHHHHHHHHCTTSCEEEEBCCCTTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHHCSE--E
T ss_pred EEEEecCc--cccCHHHHHHHHHHhcCCeEEEEEecccccchhhhhhhhcccccCcEEEeecccccccccccccccc--c
Confidence 44567753 334456677777776654444455431111111111122222368999999999854 6666666 5
Q ss_pred eecc----CchhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeeccCCCccCHHHHHHHHHHHhcChH-HHHHH
Q 012212 355 ISHC----GWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGIITRQEIQRKVLTLLKNDD-IRSNS 429 (468)
Q Consensus 355 I~hG----G~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~~~-~r~~a 429 (468)
|+-. ...++.||+++|+|+|+.+.. .+...+... ..|...+ .+.+++.++|.++++|++ +++++
T Consensus 91 i~ps~~e~~~~~~~Ea~~~g~pvi~s~~~----~~~e~i~~~-~~g~~~~------~d~~~~~~~i~~l~~~~~~~~~~~ 159 (166)
T d2f9fa1 91 LCTAKDEDFGLTPIEAMASGKPVIAVNEG----GFKETVINE-KTGYLVN------ADVNEIIDAMKKVSKNPDKFKKDC 159 (166)
T ss_dssp EECCSSCCSCHHHHHHHHTTCCEEEESSH----HHHHHCCBT-TTEEEEC------SCHHHHHHHHHHHHHCTTTTHHHH
T ss_pred ccccccccccccccccccccccceeecCC----cceeeecCC-cccccCC------CCHHHHHHHHHHHHhCHHHHHHHH
Confidence 5432 246999999999999998543 333444443 5666443 468999999999999965 66666
Q ss_pred HHHHH
Q 012212 430 LKLKE 434 (468)
Q Consensus 430 ~~l~~ 434 (468)
.+-++
T Consensus 160 ~~~a~ 164 (166)
T d2f9fa1 160 FRRAK 164 (166)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 55443
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=97.17 E-value=0.0012 Score=54.38 Aligned_cols=80 Identities=19% Similarity=0.147 Sum_probs=54.7
Q ss_pred CCceEEcccChHH---HhcCCCCCceee----ccCchhHHHhhhcCCceeccccccchhhhHHHHHHHhhceeEeeccCC
Q 012212 332 NRGKIVEWAPQEK---VLGHSSVACFIS----HCGWNSTMEGLSMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADEN 404 (468)
Q Consensus 332 ~nv~~~~~~p~~~---ll~~~~~~~~I~----hGG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~~~ 404 (468)
..+.+..+++... ++..+++ +|. .|-.+++.||+++|+|+|+.-. ......+ .. +.|..++.
T Consensus 92 ~~~~~~~~~~~~~l~~~~~~~di--~v~ps~~e~~~~~~~Eam~~G~pvI~~~~----~~~~e~i-~~-~~g~~~~~--- 160 (196)
T d2bfwa1 92 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDII-TN-ETGILVKA--- 160 (196)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESC----HHHHHHC-CT-TTCEEECT---
T ss_pred eeEEeeeccccccchhccccccc--cccccccccccccchhhhhcCceeeecCC----Cccceee-cC-CceeeECC---
Confidence 3444558888644 6655555 774 4446899999999999998632 2233323 33 67877776
Q ss_pred CccCHHHHHHHHHHHhc-ChH
Q 012212 405 GIITRQEIQRKVLTLLK-NDD 424 (468)
Q Consensus 405 ~~~t~~~l~~ai~~~l~-~~~ 424 (468)
-+.+++.++|.++++ +++
T Consensus 161 --~~~~~l~~~i~~~l~~~~~ 179 (196)
T d2bfwa1 161 --GDPGELANAILKALELSRS 179 (196)
T ss_dssp --TCHHHHHHHHHHHHHCCHH
T ss_pred --CCHHHHHHHHHHHHhCCHH
Confidence 468999999999886 444
|
| >d1pswa_ c.87.1.7 (A:) ADP-heptose LPS heptosyltransferase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: ADP-heptose LPS heptosyltransferase II domain: ADP-heptose LPS heptosyltransferase II species: Escherichia coli [TaxId: 562]
Probab=96.72 E-value=0.014 Score=52.20 Aligned_cols=105 Identities=14% Similarity=0.102 Sum_probs=70.7
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHHC--CCEEEEEECCcchHHHHHhhhhhccCCCCCeE-EEEcCCCCCCCcCCCCCH
Q 012212 5 PHVLVIPYPAQGHVAPLMKLATKIAER--AIKVTVVNTQFIHKKIIASLQEKAEDSSSQIK-LVTIPDGLELQAADREDP 81 (468)
Q Consensus 5 ~~Il~~~~~~~GH~~p~~~LA~~L~~r--GH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~~~ 81 (468)
||||++-..+.|++.-+.++.++|.++ +.+|++++.+.+.+.++.. +.++ ++.++... ....
T Consensus 1 MkILii~~~~iGD~il~~p~i~~Lk~~~P~~~I~~l~~~~~~~l~~~~---------p~id~v~~~~~~~-----~~~~- 65 (348)
T d1pswa_ 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSRM---------PEVNEAIPMPLGH-----GALE- 65 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTTC---------TTEEEEEEC------------C-
T ss_pred CeEEEEcCCChHHHHHHHHHHHHHHHHCCCCEEEEEEChhHHHHHhhC---------CCcCEEEEecCcc-----ccch-
Confidence 799999988999999999999999987 8999999998877755432 4553 33232110 0001
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCcccHHHHHHHhCCceEEEc
Q 012212 82 LKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVGSALEVAESMGIARAAVV 139 (468)
Q Consensus 82 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~lgiP~v~~~ 139 (468)
.....+++..++. .++|+++.-........++...+++.....
T Consensus 66 -----------~~~~~~l~~~l~~----~~~D~~i~~~~~~~~~~~~~~~~~~~~~~~ 108 (348)
T d1pswa_ 66 -----------IGERRKLGHSLRE----KRYDRAYVLPNSFKSALVPLFAGIPHRTGW 108 (348)
T ss_dssp -----------HHHHHHHHHHTTT----TTCSEEEECSCCSGGGHHHHHTTCSEEEEE
T ss_pred -----------hhhhhhHHHHhhh----cccceEeecccccchhhHHHhhcccccccc
Confidence 1112345555555 469999866555566678888899886643
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=92.81 E-value=0.061 Score=37.76 Aligned_cols=86 Identities=13% Similarity=0.149 Sum_probs=57.2
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcc--hHHHHHhhhhhccCCCCCeEEEEcCCCCCCCcCCC
Q 012212 1 MSRQPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFI--HKKIIASLQEKAEDSSSQIKLVTIPDGLELQAADR 78 (468)
Q Consensus 1 m~~~~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~--~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 78 (468)
|.+.+||.|+-.++.| |.+||+.|+++||+|+-.-...+ .+...+ .++.+..-. .+.
T Consensus 5 ~~~~~~ihfiGigG~G----Ms~LA~~L~~~G~~VsGSD~~~~~~~~~L~~----------~Gi~v~~g~---~~~---- 63 (96)
T d1p3da1 5 MRRVQQIHFIGIGGAG----MSGIAEILLNEGYQISGSDIADGVVTQRLAQ----------AGAKIYIGH---AEE---- 63 (96)
T ss_dssp CTTCCEEEEETTTSTT----HHHHHHHHHHHTCEEEEEESCCSHHHHHHHH----------TTCEEEESC---CGG----
T ss_pred chhCCEEEEEEECHHH----HHHHHHHHHhCCCEEEEEeCCCChhhhHHHH----------CCCeEEECC---ccc----
Confidence 4577899999998887 67899999999999996543222 222233 344443211 000
Q ss_pred CCHHHHHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCcc---cHHHHHHHhCCceE
Q 012212 79 EDPLKLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVG---SALEVAESMGIARA 136 (468)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~---~~~~~A~~lgiP~v 136 (468)
.+ .++|+||+..... .-...|+..|||++
T Consensus 64 -----------------------~i------~~~d~vV~S~AI~~~npel~~A~~~gipii 95 (96)
T d1p3da1 64 -----------------------HI------EGASVVVVSSAIKDDNPELVTSKQKRIPVI 95 (96)
T ss_dssp -----------------------GG------TTCSEEEECTTSCTTCHHHHHHHHTTCCEE
T ss_pred -----------------------cC------CCCCEEEECCCcCCCCHHHHHHHHcCCCEE
Confidence 00 1279999998766 44678999999986
|
| >d1ccwa_ c.23.6.1 (A:) Glutamate mutase, small subunit {Clostridium cochlearium [TaxId: 1494]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Cobalamin (vitamin B12)-binding domain family: Cobalamin (vitamin B12)-binding domain domain: Glutamate mutase, small subunit species: Clostridium cochlearium [TaxId: 1494]
Probab=91.54 E-value=0.16 Score=38.12 Aligned_cols=48 Identities=8% Similarity=0.059 Sum_probs=41.0
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHh
Q 012212 3 RQPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIAS 50 (468)
Q Consensus 3 ~~~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~ 50 (468)
++.||++.+.++..|.....-++..|..+|++|.++......+.+.+.
T Consensus 2 ~k~kVvi~~~~gD~H~lG~~mva~~l~~~G~~V~~LG~~~p~e~iv~a 49 (137)
T d1ccwa_ 2 EKKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVLSPQELFIKA 49 (137)
T ss_dssp CCCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEEECHHHHHHH
T ss_pred CCCEEEEEecCCChhHHHHHHHHHHHHHCCCeEEecccccCHHHHHHH
Confidence 457999999999999999999999999999999999876555544443
|
| >d1j9ja_ c.106.1.1 (A:) SurE homolog TM1662 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: SurE-like superfamily: SurE-like family: SurE-like domain: SurE homolog TM1662 species: Thermotoga maritima [TaxId: 2336]
Probab=90.97 E-value=0.38 Score=40.18 Aligned_cols=114 Identities=11% Similarity=0.075 Sum_probs=60.3
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCCCCCC-CcCCCCCHHH
Q 012212 5 PHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDGLEL-QAADREDPLK 83 (468)
Q Consensus 5 ~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~ 83 (468)
||||+.-==|. |---+..|+++| ++||+|+++.+...+-...... .....+++..+...-.. .-.....+.+
T Consensus 1 M~ILltNDDGi-~s~gl~~L~~~l-~~~~~V~vvAP~~~~S~~g~ai-----t~~~~l~~~~~~~~~~~~~~~v~GTPaD 73 (247)
T d1j9ja_ 1 MRILVTNDDGI-QSKGIIVLAELL-SEEHEVFVVAPDKERSATGHSI-----TIHVPLWMKKVFISERVVAYSTTGTPAD 73 (247)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHH-TTTSEEEEEEESSCCTTCTTCC-----CCSSCCCEEECCCSSSEEEEEESSCHHH
T ss_pred CeEEEEcCCCC-CChHHHHHHHHH-hcCCeEEEEecCCCCcCCcccc-----cCCCCcceEEeecCCCceEEEeCCchHH
Confidence 57777743233 223366778887 5699999999987655443321 22244555544321100 0001222333
Q ss_pred HHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEe----------cCCccc---HHHHHHHhCCceEEEcc
Q 012212 84 LGESVARAMRGCLRDLIEKINQSNDCEPIRCVIA----------DVTVGS---ALEVAESMGIARAAVVP 140 (468)
Q Consensus 84 ~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~----------D~~~~~---~~~~A~~lgiP~v~~~~ 140 (468)
.....+ ..+.. .+||+||+ |.+.++ ++.-|..+|||.|.++.
T Consensus 74 cv~~al-----------~~l~~----~~pDlVvSGIN~G~N~g~dv~ySGTVgAA~ea~~~gipsiA~S~ 128 (247)
T d1j9ja_ 74 CVKLAY-----------NVVMD----KRVDLIVSGVNRGPNMGMDILHSGTVSGAMEGAMMNIPSIAISS 128 (247)
T ss_dssp HHHHHH-----------HTTST----TCCSEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHhh-----------hhccc----CcccEEEecccCCCccchhhhhHHHHHHHHHHHhcCCCcceehh
Confidence 222111 12222 57999997 444443 33445678999999874
|
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Probab=90.66 E-value=0.35 Score=44.62 Aligned_cols=110 Identities=18% Similarity=0.081 Sum_probs=71.0
Q ss_pred CceEEcccChHHH---hcCCCCCceee---ccCc-hhHHHhhhcCCce----eccccccchhhhHHHHHHHhhceeEeec
Q 012212 333 RGKIVEWAPQEKV---LGHSSVACFIS---HCGW-NSTMEGLSMGVPF----LCWPYFSDQYQNRNYICEAWKIGLQFFA 401 (468)
Q Consensus 333 nv~~~~~~p~~~l---l~~~~~~~~I~---hGG~-~s~~eal~~GvP~----v~~P~~~DQ~~na~rv~~~lG~g~~l~~ 401 (468)
.+.+...+++.++ +..+++ ++. .-|+ .++.|++++|+|. |++. |-..-+ +. ++-|+.++.
T Consensus 332 ~v~~~~~~~~~~l~a~~~~Adv--~v~~s~~EG~~lv~~Ea~a~~~p~~~g~lIlS---~~~G~~---~~-l~~g~lVnP 402 (456)
T d1uqta_ 332 LYYLNQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLS---QFAGAA---NE-LTSALIVNP 402 (456)
T ss_dssp EEEECSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEE---TTBGGG---GT-CTTSEEECT
T ss_pred eeeccCCcCHHHHhHHHhhhce--eecCCccCCCCcHHHHHHHhCCCCCCCcEEEe---CCCCCH---HH-hCCeEEECc
Confidence 3445566777554 444544 554 3566 4789999999993 2222 222222 22 345777776
Q ss_pred cCCCccCHHHHHHHHHHHhcChH--HHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhhc
Q 012212 402 DENGIITRQEIQRKVLTLLKNDD--IRSNSLKLKEVARKSLLGGGSSFRNFESFISDIKMLI 461 (468)
Q Consensus 402 ~~~~~~t~~~l~~ai~~~l~~~~--~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 461 (468)
.+.++++++|.++|+++. -+++.+++.+..+.. +...-.++|+++|++.+
T Consensus 403 -----~d~~~~A~ai~~aL~~~~~er~~~~~~~~~~v~~~-----~~~~W~~~fl~~l~~~~ 454 (456)
T d1uqta_ 403 -----YDRDEVAAALDRALTMSLAERISRHAEMLDVIVKN-----DINHWQECFISDLKQIV 454 (456)
T ss_dssp -----TCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHT-----CHHHHHHHHHHHHHHSC
T ss_pred -----CCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHhhc
Confidence 679999999999998543 455556666666653 55666789999998754
|
| >d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: GTPase domain of the signal recognition particle receptor FtsY species: Escherichia coli [TaxId: 562]
Probab=89.63 E-value=1.6 Score=35.04 Aligned_cols=43 Identities=16% Similarity=0.285 Sum_probs=36.4
Q ss_pred CEEE-EEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHH
Q 012212 5 PHVL-VIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKI 47 (468)
Q Consensus 5 ~~Il-~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i 47 (468)
.+|+ |+-..|.|-..-..+||..+.++|.+|.+++.+.++...
T Consensus 9 p~vi~lvGptGvGKTTTiAKLA~~~~~~g~kV~lit~Dt~R~gA 52 (211)
T d2qy9a2 9 PFVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAA 52 (211)
T ss_dssp TEEEEEECCTTSCHHHHHHHHHHHHHTTTCCEEEECCCTTCHHH
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEecccccccc
Confidence 4555 667778899999999999999999999999999886533
|
| >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Thermotoga maritima [TaxId: 2336]
Probab=88.44 E-value=0.23 Score=34.02 Aligned_cols=82 Identities=11% Similarity=-0.016 Sum_probs=54.0
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcc--hHHHHHhhhhhccCCCCCeEEEEcCCCCCCCcCCCCCHH
Q 012212 5 PHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFI--HKKIIASLQEKAEDSSSQIKLVTIPDGLELQAADREDPL 82 (468)
Q Consensus 5 ~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~--~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 82 (468)
|||-|+-.++.| |.+||+.|+++||+|+--=.... .+.+++ .++.+.. +. ...+.
T Consensus 2 ~~ihfiGIgG~G----Ms~LA~~L~~~G~~VsGSD~~~~~~t~~L~~----------~Gi~i~~---gh-----~~~~i- 58 (89)
T d1j6ua1 2 MKIHFVGIGGIG----MSAVALHEFSNGNDVYGSNIEETERTAYLRK----------LGIPIFV---PH-----SADNW- 58 (89)
T ss_dssp CEEEEETTTSHH----HHHHHHHHHHTTCEEEEECSSCCHHHHHHHH----------TTCCEES---SC-----CTTSC-
T ss_pred cEEEEEeECHHH----HHHHHHHHHhCCCeEEEEeCCCChhHHHHHH----------CCCeEEe---ee-----ccccc-
Confidence 788899888765 88899999999999986543321 223333 3444431 10 11111
Q ss_pred HHHHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEecCCcc---cHHHHHHHhCCceE
Q 012212 83 KLGESVARAMRGCLRDLIEKINQSNDCEPIRCVIADVTVG---SALEVAESMGIARA 136 (468)
Q Consensus 83 ~~~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~D~~~~---~~~~~A~~lgiP~v 136 (468)
..+|+||+..... .-...|+..|||++
T Consensus 59 ---------------------------~~~d~vV~SsAI~~~npel~~A~~~gIpv~ 88 (89)
T d1j6ua1 59 ---------------------------YDPDLVIKTPAVRDDNPEIVRARMERVPIE 88 (89)
T ss_dssp ---------------------------CCCSEEEECTTCCTTCHHHHHHHHTTCCEE
T ss_pred ---------------------------CCCCEEEEecCcCCCCHHHHHHHHcCCCcc
Confidence 1389999997655 56678999999975
|
| >d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: GTPase domain of the signal sequence recognition protein Ffh species: Archaeon Acidianus ambivalens [TaxId: 2283]
Probab=87.35 E-value=2.8 Score=33.58 Aligned_cols=44 Identities=20% Similarity=0.267 Sum_probs=32.6
Q ss_pred CCEEE-EEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHH
Q 012212 4 QPHVL-VIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKI 47 (468)
Q Consensus 4 ~~~Il-~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i 47 (468)
..+|+ |+-..|.|-..-..+||..+.++|.+|.+++.+.++-..
T Consensus 11 ~p~vi~lvGptGvGKTTTiAKLA~~~~~~g~kV~lit~Dt~R~ga 55 (211)
T d1j8yf2 11 IPYVIMLVGVQGTGKATTAGKLAYFYKKKGFKVGLVGADVYRPAA 55 (211)
T ss_dssp SSEEEEEECSCCC----HHHHHHHHHHHTTCCEEEEECCCSSHHH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEEeeccccch
Confidence 34555 666668899999999999999999999999999876433
|
| >d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: GTPase domain of the signal recognition particle receptor FtsY species: Thermus aquaticus [TaxId: 271]
Probab=86.46 E-value=2.3 Score=34.00 Aligned_cols=41 Identities=20% Similarity=0.186 Sum_probs=35.6
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchH
Q 012212 5 PHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHK 45 (468)
Q Consensus 5 ~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~ 45 (468)
.-|+|+-..|.|-..-..+||..+.++|.+|.+++.+.++.
T Consensus 7 ~vi~lvGptGvGKTTTiaKLA~~~~~~g~kV~lit~Dt~R~ 47 (207)
T d1okkd2 7 RVVLVVGVNGVGKTTTIAKLGRYYQNLGKKVMFCAGDTFRA 47 (207)
T ss_dssp SEEEEECSTTSSHHHHHHHHHHHHHTTTCCEEEECCCCSST
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEEeccccc
Confidence 34567777788999999999999999999999999998754
|
| >d1l5xa_ c.106.1.1 (A:) SurE homolog PAE2908 (SurE-alpha) {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: SurE-like superfamily: SurE-like family: SurE-like domain: SurE homolog PAE2908 (SurE-alpha) species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=85.34 E-value=1.3 Score=37.44 Aligned_cols=113 Identities=15% Similarity=0.038 Sum_probs=63.1
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHHHHhhhhhccCCCCCeEEEEcCCCCCCCcCCCCCHHHH
Q 012212 5 PHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKIIASLQEKAEDSSSQIKLVTIPDGLELQAADREDPLKL 84 (468)
Q Consensus 5 ~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 84 (468)
||||+.-==|. |---+..|+++|.+.| +|+++.+...+-...... ....++++..+.......-.....+.+.
T Consensus 1 M~ILlTNDDGi-~a~Gl~~L~~~l~~~g-~V~vvAP~~~~Sg~g~ai-----t~~~pl~~~~~~~~~~~~~~v~GTPaDC 73 (276)
T d1l5xa_ 1 MKILVTNDDGV-HSPGLRLLYQFALSLG-DVDVVAPESPKSATGLGI-----TLHKPLRMYEVDLCGFRAIATSGTPSDT 73 (276)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHGGGS-EEEEEEESSCTTTSCSSC-----CCSSCBCEEEEECSSSEEEEESSCHHHH
T ss_pred CeEEEEcCCCC-CCHHHHHHHHHHHhcC-CEEEEecCCCCcCcccce-----eCCCCcEEEEeecCCceEEEEcCcchhh
Confidence 56777643333 3345788999999998 699998876654443221 2224566665543211110022333333
Q ss_pred HHHHHHHhhHHHHHHHHHHhhCCCCCCceEEEe----------cCCc-c---cHHHHHHHhCCceEEEcc
Q 012212 85 GESVARAMRGCLRDLIEKINQSNDCEPIRCVIA----------DVTV-G---SALEVAESMGIARAAVVP 140 (468)
Q Consensus 85 ~~~~~~~~~~~~~~ll~~l~~~~~~~~pDlvi~----------D~~~-~---~~~~~A~~lgiP~v~~~~ 140 (468)
...-+ ..+. .+||+||+ |... + +++.-|..+|||.|.++.
T Consensus 74 V~lgl-----------~~~~-----~~pDlVvSGIN~G~N~G~dv~~~SGTVgAA~Ea~~~GipsIA~S~ 127 (276)
T d1l5xa_ 74 VYLAT-----------FGLG-----RKYDIVLSGINLGDNTSLQVILSSGTLGAAFQAALLGIPALAYSA 127 (276)
T ss_dssp HHHHH-----------HHHT-----SCCSEEEEEEEEBCCCSHHHHTTCHHHHHHHHHHHTTCCEEEEEE
T ss_pred hhhhh-----------ccCC-----CCCCEEEECCcCCccCCceeEEechHHHHHHHHHhcCCCceeeee
Confidence 22211 1121 56999997 3322 4 334455778999999885
|
| >d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal recognition particle receptor FtsY {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: GTPase domain of the signal recognition particle receptor FtsY species: Thermotoga maritima [TaxId: 2336]
Probab=85.29 E-value=3.6 Score=32.93 Aligned_cols=44 Identities=18% Similarity=0.270 Sum_probs=36.8
Q ss_pred CCEEE-EEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHH
Q 012212 4 QPHVL-VIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKI 47 (468)
Q Consensus 4 ~~~Il-~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i 47 (468)
+.+|+ |+-..|.|-..-..+||..+.++|++|.+++.+.++-..
T Consensus 10 ~p~vi~lvGptGvGKTTTiAKLAa~~~~~~~kV~lit~Dt~R~gA 54 (213)
T d1vmaa2 10 PPFVIMVVGVNGTGKTTSCGKLAKMFVDEGKSVVLAAADTFRAAA 54 (213)
T ss_dssp SCEEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEECTTCHHH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEeecccccch
Confidence 45654 666668899999999999999999999999999886433
|
| >d1uana_ c.134.1.1 (A:) Hypothetical protein TT1542 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: LmbE-like superfamily: LmbE-like family: LmbE-like domain: Hypothetical protein TT1542 species: Thermus thermophilus [TaxId: 274]
Probab=85.15 E-value=2.7 Score=34.13 Aligned_cols=37 Identities=5% Similarity=0.027 Sum_probs=26.2
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEEC
Q 012212 4 QPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNT 40 (468)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~ 40 (468)
|||||++...-.--..-+-+....++++|++|++++-
T Consensus 1 m~~VLvi~aHPDDe~lg~GGtiak~~~~G~~V~vv~~ 37 (227)
T d1uana_ 1 MLDLLVVAPHPDDGELGCGGTLARAKAEGLSTGILDL 37 (227)
T ss_dssp CEEEEEEESSTTHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CceEEEEEeCCChHHHHHHHHHHHHHHcCCeEEEEEE
Confidence 6789877544333445566677778899999988874
|
| >d1qkka_ c.23.1.1 (A:) Transcriptional regulatory protein DctD, receiver domain {Sinorhizobium meliloti [TaxId: 382]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: CheY-like family: CheY-related domain: Transcriptional regulatory protein DctD, receiver domain species: Sinorhizobium meliloti [TaxId: 382]
Probab=83.19 E-value=4.7 Score=29.66 Aligned_cols=63 Identities=6% Similarity=-0.030 Sum_probs=41.7
Q ss_pred hcCCceeccccccchhhhHHHHHHHhhceeEeeccCCCccCHHHHHHHHHHHhcChHHHHHHHHHHHHH
Q 012212 368 SMGVPFLCWPYFSDQYQNRNYICEAWKIGLQFFADENGIITRQEIQRKVLTLLKNDDIRSNSLKLKEVA 436 (468)
Q Consensus 368 ~~GvP~v~~P~~~DQ~~na~rv~~~lG~g~~l~~~~~~~~t~~~l~~ai~~~l~~~~~r~~a~~l~~~~ 436 (468)
.-.+|+|++--..|. ..+.+.-+. |+--.+.+- ++.++|..+|++++....+.+..+.+++.+
T Consensus 70 ~~~~pvI~lT~~~~~-~~~~~a~~~-Ga~dyl~KP----~~~~~L~~~i~~~~~~~~~~~e~~~l~~~~ 132 (140)
T d1qkka_ 70 DPDLPMILVTGHGDI-PMAVQAIQD-GAYDFIAKP----FAADRLVQSARRAEEKRRLVMENRSLRRAA 132 (140)
T ss_dssp CTTSCEEEEECGGGH-HHHHHHHHT-TCCEEEESS----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcEEEEECCCCH-HHHHHHHHc-CCCEeecCC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456898888655555 455555553 876666553 789999999999987555544444444443
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=83.09 E-value=2.4 Score=31.84 Aligned_cols=38 Identities=8% Similarity=0.193 Sum_probs=29.0
Q ss_pred CCCEEEEEc-CCCccChHHHHHHHHHHHHCCCEEEEEECCcchH
Q 012212 3 RQPHVLVIP-YPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHK 45 (468)
Q Consensus 3 ~~~~Il~~~-~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~ 45 (468)
.+.||+|+- .+..|. .+|+.|.++||+|+++.......
T Consensus 8 ~~~kI~iIGg~G~mG~-----~la~~L~~~G~~V~~~d~~~~~~ 46 (152)
T d2pv7a2 8 DIHKIVIVGGYGKLGG-----LFARYLRASGYPISILDREDWAV 46 (152)
T ss_dssp TCCCEEEETTTSHHHH-----HHHHHHHTTTCCEEEECTTCGGG
T ss_pred CCCeEEEEcCCCHHHH-----HHHHHHHHcCCCcEecccccccc
Confidence 467999996 454443 58999999999999998765433
|
| >d1gsaa1 c.30.1.3 (A:1-122) Prokaryotic glutathione synthetase, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: Prokaryotic glutathione synthetase, N-terminal domain domain: Prokaryotic glutathione synthetase, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=83.05 E-value=0.69 Score=33.66 Aligned_cols=40 Identities=5% Similarity=0.017 Sum_probs=31.3
Q ss_pred CCEEEEEcCCCc---cChHHHHHHHHHHHHCCCEEEEEECCcc
Q 012212 4 QPHVLVIPYPAQ---GHVAPLMKLATKIAERAIKVTVVNTQFI 43 (468)
Q Consensus 4 ~~~Il~~~~~~~---GH~~p~~~LA~~L~~rGH~Vt~~~~~~~ 43 (468)
||||+|+.=|-. =.-.-.+.|+++.++|||+|.++.+...
T Consensus 1 mmkI~FimDpie~l~~~kDTT~~Lm~eAq~Rg~~v~~~~~~dL 43 (122)
T d1gsaa1 1 MIKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMGDL 43 (122)
T ss_dssp CCEEEEECSCGGGCCTTTCHHHHHHHHHHHTTCEEEEECGGGE
T ss_pred CcEEEEEeCCHHHCCCCCChHHHHHHHHHHCCCeEEEEecCce
Confidence 678999965532 3445688999999999999999988654
|
| >d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: GTPase domain of the signal sequence recognition protein Ffh species: Thermus aquaticus [TaxId: 271]
Probab=82.01 E-value=4.8 Score=32.03 Aligned_cols=44 Identities=11% Similarity=0.158 Sum_probs=37.0
Q ss_pred CCEE-EEEcCCCccChHHHHHHHHHHHHCCCEEEEEECCcchHHH
Q 012212 4 QPHV-LVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQFIHKKI 47 (468)
Q Consensus 4 ~~~I-l~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~~~~~~i 47 (468)
..+| +|+-..|.|-..-..+||..+.++|.+|.+++.+.++...
T Consensus 9 ~~~vi~lvGp~GvGKTTTiaKLA~~~~~~g~kV~lit~Dt~R~gA 53 (207)
T d1ls1a2 9 DRNLWFLVGLQGSGKTTTAAKLALYYKGKGRRPLLVAADTQRPAA 53 (207)
T ss_dssp SSEEEEEECCTTTTHHHHHHHHHHHHHHTTCCEEEEECCSSCHHH
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEecccccchH
Confidence 3565 4566678899999999999999999999999999886544
|
| >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=81.61 E-value=0.24 Score=39.57 Aligned_cols=36 Identities=19% Similarity=0.188 Sum_probs=30.2
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHHCCCEEEEEECC
Q 012212 1 MSRQPHVLVIPYPAQGHVAPLMKLATKIAERAIKVTVVNTQ 41 (468)
Q Consensus 1 m~~~~~Il~~~~~~~GH~~p~~~LA~~L~~rGH~Vt~~~~~ 41 (468)
|+.|.||.++-.+.+|. +||..|.+.||+|++....
T Consensus 4 ~~~m~KI~ViGaG~wGt-----AlA~~La~~g~~V~l~~r~ 39 (189)
T d1n1ea2 4 LLYLNKAVVFGSGAFGT-----ALAMVLSKKCREVCVWHMN 39 (189)
T ss_dssp CCCEEEEEEECCSHHHH-----HHHHHHHTTEEEEEEECSC
T ss_pred cceeceEEEECCCHHHH-----HHHHHHHHcCCeEEEEEec
Confidence 66788999997777664 7999999999999999864
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| >d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) species: Escherichia coli [TaxId: 562]
Probab=80.92 E-value=0.51 Score=38.65 Aligned_cols=40 Identities=20% Similarity=0.336 Sum_probs=32.5
Q ss_pred CCEEEEEcCCCccChHH------------HHHHHHHHHHCCCEEEEEECCcc
Q 012212 4 QPHVLVIPYPAQGHVAP------------LMKLATKIAERAIKVTVVNTQFI 43 (468)
Q Consensus 4 ~~~Il~~~~~~~GH~~p------------~~~LA~~L~~rGH~Vt~~~~~~~ 43 (468)
-+|||+...|+.-++.| -.+||+++..+||+||+++++..
T Consensus 6 g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~ 57 (223)
T d1u7za_ 6 HLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS 57 (223)
T ss_dssp TCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC
T ss_pred CCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccc
Confidence 46788777777666654 57999999999999999999764
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