Citrus Sinensis ID: 012314
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 466 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SGA8 | 464 | UDP-glycosyltransferase 8 | yes | no | 0.950 | 0.954 | 0.450 | 1e-116 | |
| Q9LMF0 | 479 | UDP-glycosyltransferase 8 | no | no | 0.841 | 0.818 | 0.334 | 1e-63 | |
| Q9LME8 | 487 | UDP-glycosyltransferase 8 | no | no | 0.927 | 0.887 | 0.307 | 5e-62 | |
| Q9SK82 | 489 | UDP-glycosyltransferase 8 | no | no | 0.939 | 0.895 | 0.310 | 7e-62 | |
| Q9M9E7 | 489 | UDP-glycosyltransferase 8 | no | no | 0.946 | 0.901 | 0.308 | 1e-61 | |
| Q9LMF1 | 488 | UDP-glycosyltransferase 8 | no | no | 0.954 | 0.911 | 0.307 | 1e-61 | |
| Q9ZWJ3 | 481 | UDP-glycosyltransferase 8 | no | no | 0.896 | 0.869 | 0.311 | 1e-60 | |
| Q9SJL0 | 490 | UDP-glycosyltransferase 8 | no | no | 0.952 | 0.906 | 0.288 | 1e-58 | |
| Q9LHJ2 | 461 | UDP-glycosyltransferase 8 | no | no | 0.886 | 0.895 | 0.308 | 1e-58 | |
| Q9LTH2 | 449 | UDP-glycosyltransferase 7 | no | no | 0.907 | 0.942 | 0.294 | 4e-57 |
| >sp|Q9SGA8|U83A1_ARATH UDP-glycosyltransferase 83A1 OS=Arabidopsis thaliana GN=UGT83A1 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 419 bits (1076), Expect = e-116, Method: Compositional matrix adjust.
Identities = 209/464 (45%), Positives = 307/464 (66%), Gaps = 21/464 (4%)
Query: 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQG---KNYLG 57
M RP V+V+P PAQGHV+PL+ FS+ LAK G ++TF+NT++NH R++ SL ++Y+G
Sbjct: 9 MGRPHVVVIPYPAQGHVLPLISFSRYLAKQGIQITFINTEFNHNRIISSLPNSPHEDYVG 68
Query: 58 EQIHLVSIPDGMEPW-EDRNDLGKLIEKCLQVMPGKLEELIEEINSREDEK--IDCFIAD 114
+QI+LVSIPDG+E E+RN GKL E L+ MP K+EELIE + + I C +AD
Sbjct: 69 DQINLVSIPDGLEDSPEERNIPGKLSESVLRFMPKKVEELIERMMAETSGGTIISCVVAD 128
Query: 115 GNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSHGTPMSMQMFRIAPK 174
++GW++E+A K +R F P++AAS+ L F I KLIDDG+IDS GT + +++P
Sbjct: 129 QSLGWAIEVAAKFGIRRTAFCPAAAASMVLGFSIQKLIDDGLIDSDGTVRVNKTIQLSPG 188
Query: 175 MPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTFPELL 234
MP+M + W + + SQK F L+ +N ++ + ++ CNS +ELE+ AF P ++
Sbjct: 189 MPKMETDKFVWVCLKNKESQKNIFQLMLQNNNSIESTDWLLCNSVHELETAAFGLGPNIV 248
Query: 235 PIGPLLASNRL--GNTA-GYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELA 291
PIGP+ ++ L G+T+ G F D +CL WLD+Q P SV+YV+FGSF ++ Q +ELA
Sbjct: 249 PIGPIGWAHSLEEGSTSLGSFLPHDRDCLDWLDRQIPGSVIYVAFGSFGVMGNPQLEELA 308
Query: 292 LGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLS 351
+GLEL KRP LWV D+ P + R +++ WAPQ VL+ +I CF+S
Sbjct: 309 IGLELTKRPVLWV--------TGDQQPIKLG---SDRVKVVRWAPQREVLSSGAIGCFVS 357
Query: 352 HCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKV 411
HCGWNST+EG NGIPFLC PYF DQF+N+ YICD WK+GL +RD G++ R E+K K+
Sbjct: 358 HCGWNSTLEGAQNGIPFLCIPYFADQFINKAYICDVWKIGLGLERDARGVVPRLEVKKKI 417
Query: 412 DQVLGN-QDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVKT 454
D+++ + +++ RA+++KE M SV + G S + F+ W+K+
Sbjct: 418 DEIMRDGGEYEERAMKVKEIVMKSVAKDGISCENLNKFVNWIKS 461
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Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: - |
| >sp|Q9LMF0|U85A5_ARATH UDP-glycosyltransferase 85A5 OS=Arabidopsis thaliana GN=UGT85A5 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 244 bits (622), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 138/413 (33%), Positives = 217/413 (52%), Gaps = 21/413 (5%)
Query: 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLG--EQI 60
+P V+ +P PAQGH+ P+L+ ++ L GF VTFVNT+YNH R++ S +G N L
Sbjct: 11 KPHVVCIPFPAQGHINPMLKVAKLLYARGFHVTFVNTNYNHNRLIRS-RGPNSLDGLPSF 69
Query: 61 HLVSIPDGMEPWEDRN---DLGKLIEKCLQVMPGKLEELIEEINSRED-EKIDCFIADGN 116
SIPDG+ P E+++ D+ L E ++ +EL+ IN+ +D + C ++DG
Sbjct: 70 RFESIPDGL-PEENKDVMQDVPTLCESTMKNCLAPFKELLRRINTTKDVPPVSCIVSDGV 128
Query: 117 IGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSHGTPMSMQMFRIAPKMP 176
+ ++++ A+++ V +FW SA + I+ G+ P M
Sbjct: 129 MSFTLDAAEELGVPDVLFWTPSACGFLAYLHFYRFIEKGLSPIKDESSLDTKINWIPSMK 188
Query: 177 EMNSRDCFWAHIGDWTSQKIFFDLL----ERNTRAMIAVNFHFCNSTYELESEAFTTFPE 232
+ +D + I ++ I + +R RA + F + +++ + P+
Sbjct: 189 NLGLKD-IPSFIRATNTEDIMLNFFVHEADRAKRASAIILNTFDSLEHDVVRSIQSIIPQ 247
Query: 233 LLPIGPL-LASNR-------LGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQ 284
+ IGPL L NR +G W E+ CL WLD + P+SVVYV+FGS T++
Sbjct: 248 VYTIGPLHLFVNRDIDEESDIGQIGTNMWREEMECLDWLDTKSPNSVVYVNFGSITVMSA 307
Query: 285 VQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHP 344
Q E A GL K+ FLWV+RPD+ P F A R + SW PQ +VL+HP
Sbjct: 308 KQLVEFAWGLAATKKDFLWVIRPDLVAGDVPMLPPDFLIETANRRMLASWCPQEKVLSHP 367
Query: 345 SIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRD 397
++ FL+H GWNST+E +S G+P +CWP+F +Q N +Y CD W+VG++ D
Sbjct: 368 AVGGFLTHSGWNSTLESLSGGVPMVCWPFFAEQQTNCKYCCDEWEVGMEIGGD 420
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
| >sp|Q9LME8|U85A7_ARATH UDP-glycosyltransferase 85A7 OS=Arabidopsis thaliana GN=UGT85A7 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 239 bits (609), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 143/465 (30%), Positives = 237/465 (50%), Gaps = 33/465 (7%)
Query: 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLG--EQI 60
+P V+ +P PAQGH+ P+L+ ++ L GF VTFVNT YNH R++ S +G N L
Sbjct: 11 KPHVVCVPYPAQGHINPMLKVAKLLYAKGFHVTFVNTLYNHNRLLRS-RGPNALDGFPSF 69
Query: 61 HLVSIPDGMEPWEDRNDLGKLIEKCLQVMPGKL---EELIEEINSRED-EKIDCFIADGN 116
SIPDG+ P D + C+ + L +E++ IN ++D + C ++DG
Sbjct: 70 RFESIPDGL-PETDGDRTQHTPTVCMSIEKNCLAPFKEILRRINDKDDVPPVSCIVSDGV 128
Query: 117 IGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIID-SHGTPMSMQMFRIA--- 172
+ ++++ A+++ V +FW +SA + I+ G+ + MS +
Sbjct: 129 MSFTLDAAEELGVPEVIFWTNSACGFMTILHFYLFIEKGLSPFKDESYMSKEHLDTVIDW 188
Query: 173 -PKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTFP 231
P M + +D ++I I + L R + N+ ELE + +
Sbjct: 189 IPSMKNLRLKD-IPSYIRTTNPDNIMLNFLIREVERSKRASAIILNTFDELEHDVIQSMQ 247
Query: 232 ELLP----IGPLL--------ASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSF 279
+LP IGPL ++ +G W E+ CL WLD + P+SV++V+FG
Sbjct: 248 SILPPVYSIGPLHLLVKEEINEASEIGQMGLNLWREEMECLDWLDTKTPNSVLFVNFGCI 307
Query: 280 TILDQVQFQELALGLELCKRPFLWVVRPDITT-DANDRYPEGFQERVAARGQMISWAPQL 338
T++ Q +E A GL ++ FLWV+RP++ +A P+ F R + SW PQ
Sbjct: 308 TVMSAKQLEEFAWGLAASRKEFLWVIRPNLVVGEAMVVLPQEFLAETIDRRMLASWCPQE 367
Query: 339 RVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDE 398
+VL+HP+I FL+HCGWNST+E ++ G+P +CWP F +Q N ++ CD W VG++ +D
Sbjct: 368 KVLSHPAIGGFLTHCGWNSTLESLAGGVPMICWPCFSEQPTNCKFCCDEWGVGIEIGKD- 426
Query: 399 GGIITREEIKNKVDQVLGNQDFKARALELKEKAMSSVREGGSSYK 443
+ REE++ V +++ + K + L K + + E + YK
Sbjct: 427 ---VKREEVETVVRELMDGE--KGKKLREKAEEWRRLAEEATRYK 466
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
| >sp|Q9SK82|U85A1_ARATH UDP-glycosyltransferase 85A1 OS=Arabidopsis thaliana GN=UGT85A1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 238 bits (607), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 148/477 (31%), Positives = 241/477 (50%), Gaps = 39/477 (8%)
Query: 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLG--EQI 60
+P V+ +P PAQGH+ P++ ++ L GF VTFVNT YNH R + S +G N L
Sbjct: 11 KPHVVCVPYPAQGHINPMMRVAKLLHARGFYVTFVNTVYNHNRFLRS-RGSNALDGLPSF 69
Query: 61 HLVSIPDGMEPWEDRN---DLGKLIEKCLQVMPGKLEELIEEINSRED-EKIDCFIADGN 116
SI DG+ P D + D+ L E ++ EL++ IN+ ++ + C ++DG
Sbjct: 70 RFESIADGL-PETDMDATQDITALCESTMKNCLAPFRELLQRINAGDNVPPVSCIVSDGC 128
Query: 117 IGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGII----DSHGTPMSMQ--MFR 170
+ +++++A+++ V +FW +S + I+ G+ +S+ T ++ +
Sbjct: 129 MSFTLDVAEELGVPEVLFWTTSGCAFLAYLHFYLFIEKGLCPLKDESYLTKEYLEDTVID 188
Query: 171 IAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTF 230
P M + +D + I + R T + N+ +LE +
Sbjct: 189 FIPTMKNVKLKD-IPSFIRTTNPDDVMISFALRETERAKRASAIILNTFDDLEHDVVHAM 247
Query: 231 PELLP----IGPL-LASNR-------LGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGS 278
+LP +GPL L +NR +G + W E+ CL WLD + +SV+Y++FGS
Sbjct: 248 QSILPPVYSVGPLHLLANREIEEGSEIGMMSSNLWKEEMECLDWLDTKTQNSVIYINFGS 307
Query: 279 FTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQL 338
T+L Q E A GL + FLWV+RPD+ P F R + SW PQ
Sbjct: 308 ITVLSVKQLVEFAWGLAGSGKEFLWVIRPDLVAGEEAMVPPDFLMETKDRSMLASWCPQE 367
Query: 339 RVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDE 398
+VL+HP+I FL+HCGWNS +E +S G+P +CWP+F DQ +N ++ CD W VG++
Sbjct: 368 KVLSHPAIGGFLTHCGWNSILESLSCGVPMVCWPFFADQQMNCKFCCDEWDVGIEI---- 423
Query: 399 GGIITREEIKNKVDQVLGNQ---DFKARALE---LKEKAMSSVREGGSSYKTFQNFL 449
GG + REE++ V +++ + + +A+E L EKA + GSS F+ +
Sbjct: 424 GGDVKREEVEAVVRELMDGEKGKKMREKAVEWQRLAEKATE--HKLGSSVMNFETVV 478
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Involved in the O-glucosylation of trans-zeatin and dihydrozeatin. Also active in vitro on cis-zeatin. Not active on N-glucosylated substrates. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
| >sp|Q9M9E7|U85A4_ARATH UDP-glycosyltransferase 85A4 OS=Arabidopsis thaliana GN=UGT85A4 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 238 bits (606), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 149/483 (30%), Positives = 242/483 (50%), Gaps = 42/483 (8%)
Query: 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLG--EQI 60
+P + +P PAQGH+ P+L+ ++ L GF VTFVNTDYNH+R+++S +G + L
Sbjct: 11 KPHAMCIPYPAQGHINPMLKLAKLLHARGFHVTFVNTDYNHRRILQS-RGPHALNGLPSF 69
Query: 61 HLVSIPDGMEPWED---RNDLGKLIEKCLQVMPGKLEELIEEINSRED-EKIDCFIADGN 116
+IPDG+ PW D + D+ KLI+ + ++LI +NS D + C I+D +
Sbjct: 70 RFETIPDGL-PWTDVDAKQDMLKLIDSTINNCLAPFKDLILRLNSGSDIPPVSCIISDAS 128
Query: 117 IGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGII---DSHGTPMSMQM-FRIA 172
+ ++++ A+++ + + W +SA ++ L KLI+ II DS ++
Sbjct: 129 MSFTIDAAEELKIPVVLLWTNSATALILYLHYQKLIEKEIIPLKDSSDLKKHLETEIDWI 188
Query: 173 PKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTFPE 232
P M ++ +D F + Q + T + + F N+ +LE +
Sbjct: 189 PSMKKIKLKD-FPDFVTTTNPQDPMISFILHVTGRIKRASAIFINTFEKLEHNVLLSLRS 247
Query: 233 LLP----IGPL-LASNR-------LGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFT 280
LLP +GP + NR + W E++ L WLD + +V+YV+FGS T
Sbjct: 248 LLPQIYSVGPFQILENREIDKNSEIRKLGLNLWEEETESLDWLDTKAEKAVIYVNFGSLT 307
Query: 281 ILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMIS-WAPQLR 339
+L Q E A GL + FLWVVR + + P F RG +I W Q +
Sbjct: 308 VLTSEQILEFAWGLARSGKEFLWVVRSGMVDGDDSILPAEFLSETKNRGMLIKGWCSQEK 367
Query: 340 VLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEG 399
VL+HP+I FL+HCGWNST+E + G+P +CWP+F DQ N ++ C+ W +G++ G
Sbjct: 368 VLSHPAIGGFLTHCGWNSTLESLYAGVPMICWPFFADQLTNRKFCCEDWGIGMEI----G 423
Query: 400 GIITREEIKNKVDQVLGNQDFKARALELKEKAM--------SSVREGGSSYKTFQNFLQW 451
+ RE ++ V +++ + K L+EK + +S GSSY F+ +
Sbjct: 424 EEVKRERVETVVKELMDGEKGK----RLREKVVEWRRLAEEASAPPLGSSYVNFETVVNK 479
Query: 452 VKT 454
V T
Sbjct: 480 VLT 482
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
| >sp|Q9LMF1|U85A3_ARATH UDP-glycosyltransferase 85A3 OS=Arabidopsis thaliana GN=UGT85A3 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 237 bits (605), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 146/475 (30%), Positives = 241/475 (50%), Gaps = 30/475 (6%)
Query: 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLG--EQI 60
+P V+ +P PAQGH+ P+++ ++ L GF VTFVNT YNH R++ S +G N L
Sbjct: 11 KPHVVCVPYPAQGHINPMMKVAKLLHVKGFHVTFVNTVYNHNRLLRS-RGANALDGLPSF 69
Query: 61 HLVSIPDGMEPW--EDRNDLGKLIEKCLQVMPGKLEELIEEINSRED-EKIDCFIADGNI 117
SIPDG+ + D+ L E + ++L++ I +RED + C ++DG++
Sbjct: 70 QFESIPDGLPETGVDATQDIPALSESTTKNCLVPFKKLLQRIVTREDVPPVSCIVSDGSM 129
Query: 118 GWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSHGTPMSMQMF--RIAPKM 175
+++++A+++ V FW +SA I+ G+ + + + +
Sbjct: 130 SFTLDVAEELGVPEIHFWTTSACGFMAYLHFYLFIEKGLCPVKDASCLTKEYLDTVIDWI 189
Query: 176 PEMNSRDC--FWAHIGDWTSQKIFFDLLERNT----RAMIAVNFHFCNSTYELESEAFTT 229
P MN+ + I I + + R RA + F + +++ +
Sbjct: 190 PSMNNVKLKDIPSFIRTTNPNDIMLNFVVREACRTKRASAIILNTFDDLEHDIIQSMQSI 249
Query: 230 FPELLPIGPL-LASNR-------LGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTI 281
P + PIGPL L NR +G W E++ CL WL+ + +SVVYV+FGS TI
Sbjct: 250 LPPVYPIGPLHLLVNREIEEDSEIGRMGSNLWKEETECLGWLNTKSRNSVVYVNFGSITI 309
Query: 282 LDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVL 341
+ Q E A GL + FLWV+RPD P+ F A R + SW PQ +VL
Sbjct: 310 MTTAQLLEFAWGLAATGKEFLWVMRPDSVAGEEAVIPKEFLAETADRRMLTSWCPQEKVL 369
Query: 342 NHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGI 401
+HP++ FL+HCGWNST+E +S G+P +CWP+F +Q N ++ CD W+VG++ GG
Sbjct: 370 SHPAVGGFLTHCGWNSTLESLSCGVPMVCWPFFAEQQTNCKFSCDEWEVGIEI----GGD 425
Query: 402 ITREEIKNKVDQVLGNQ---DFKARALELKEKAMSSVR-EGGSSYKTFQNFLQWV 452
+ R E++ V +++ + + +A+E + A + + GSS F+ + V
Sbjct: 426 VKRGEVEAVVRELMDGEKGKKMREKAVEWRRLAEKATKLPCGSSVINFETIVNKV 480
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
| >sp|Q9ZWJ3|U85A2_ARATH UDP-glycosyltransferase 85A2 OS=Arabidopsis thaliana GN=UGT85A2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 234 bits (596), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 141/452 (31%), Positives = 233/452 (51%), Gaps = 34/452 (7%)
Query: 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLG--EQI 60
+ V+ +P PAQGH+ P+++ ++ L GF +TFVNT YNH R++ S +G N +
Sbjct: 8 KQHVVCVPYPAQGHINPMMKVAKLLYAKGFHITFVNTVYNHNRLLRS-RGPNAVDGLPSF 66
Query: 61 HLVSIPDGMEPWEDRN---DLGKLIEKCLQVMPGKLEELIEEINSRED-EKIDCFIADGN 116
SIPDG+ P D + D+ L E ++ +EL+ +IN+R+D + C ++DG
Sbjct: 67 RFESIPDGL-PETDVDVTQDIPTLCESTMKHCLAPFKELLRQINARDDVPPVSCIVSDGC 125
Query: 117 IGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGII----DSHGTPMSMQM-FRI 171
+ ++++ A+++ V +FW +SA + I+ G+ +S+ T +
Sbjct: 126 MSFTLDAAEELGVPEVLFWTTSACGFLAYLYYYRFIEKGLSPIKDESYLTKEHLDTKIDW 185
Query: 172 APKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTFP 231
P M + +D + I I + + R + N+ +LE + +
Sbjct: 186 IPSMKNLRLKD-IPSFIRTTNPDDIMLNFIIREADRAKRASAIILNTFDDLEHDVIQSMK 244
Query: 232 ELLP----IGPLLASNR--------LGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSF 279
++P IGPL + +G T W E++ CL WL+ + +SVVYV+FGS
Sbjct: 245 SIVPPVYSIGPLHLLEKQESGEYSEIGRTGSNLWREETECLDWLNTKARNSVVYVNFGSI 304
Query: 280 TILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLR 339
T+L Q E A GL + FLWV+RPD+ P F A R + SW PQ +
Sbjct: 305 TVLSAKQLVEFAWGLAATGKEFLWVIRPDLVAGDEAMVPPEFLTATADRRMLASWCPQEK 364
Query: 340 VLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEG 399
VL+HP+I FL+HCGWNST+E + G+P +CWP+F +Q N ++ D W+VG++ G
Sbjct: 365 VLSHPAIGGFLTHCGWNSTLESLCGGVPMVCWPFFAEQQTNCKFSRDEWEVGIEI----G 420
Query: 400 GIITREEIKNKVDQVLGNQDFKARALELKEKA 431
G + REE++ V +++ + K ++EKA
Sbjct: 421 GDVKREEVEAVVRELMDEEKGK----NMREKA 448
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
| >sp|Q9SJL0|U86A1_ARATH UDP-glycosyltransferase 86A1 OS=Arabidopsis thaliana GN=UGT86A1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 228 bits (580), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 136/471 (28%), Positives = 235/471 (49%), Gaps = 27/471 (5%)
Query: 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQ---------GK 53
+P ++++P P QGHVIP + + LA HGF +TFVNTD H + + Q +
Sbjct: 8 KPHIMMIPYPLQGHVIPFVHLAIKLASHGFTITFVNTDSIHHHISTAHQDDAGDIFSAAR 67
Query: 54 NYLGEQIHLVSIPDGMEPWEDRN-DLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFI 112
+ I ++ DG DR+ + + E L V +++LI +++ R+D + C I
Sbjct: 68 SSGQHDIRYTTVSDGFPLDFDRSLNHDQFFEGILHVFSAHVDDLIAKLSRRDDPPVTCLI 127
Query: 113 ADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSHGTPMSMQMFRIA 172
AD WS I K N+ FW A + L + + LI +G S +
Sbjct: 128 ADTFYVWSSMICDKHNLVNVSFWTEPALVLNLYYHMDLLISNGHFKSLDN--RKDVIDYV 185
Query: 173 PKMPEMNSRDCF-WAHIGD--WTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTT 229
P + + +D + + D + + + +L + + + +F CN+ ELE ++ +
Sbjct: 186 PGVKAIEPKDLMSYLQVSDKDVDTNTVVYRILFKAFKDVKRADFVVCNTVQELEPDSLSA 245
Query: 230 FPELLP---IGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQ 286
P IGP+ +++ + T+ W E S+C +WL + SV+YVSFGS+ + + +
Sbjct: 246 LQAKQPVYAIGPVFSTDSVVPTS--LWAE-SDCTEWLKGRPTGSVLYVSFGSYAHVGKKE 302
Query: 287 FQELALGLELCKRPFLWVVRPDIT-TDANDRYPEGFQERVAARGQMISWAPQLRVLNHPS 345
E+A GL L F+WV+RPDI ++ D P GF ++ RG ++ W Q+ V+++P+
Sbjct: 303 IVEIAHGLLLSGISFIWVLRPDIVGSNVPDFLPAGFVDQAQDRGLVVQWCCQMEVISNPA 362
Query: 346 IACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITRE 405
+ F +HCGWNS +E V G+P LC+P DQF N + + D W +G+ E ITR+
Sbjct: 363 VGGFFTHCGWNSILESVWCGLPLLCYPLLTDQFTNRKLVVDDWCIGINL--CEKKTITRD 420
Query: 406 EIKNKVDQVLGNQ---DFKARALELKEKAMSSVREGGSSYKTFQNFLQWVK 453
++ V +++ + + + ++K +V GSS F F+ V+
Sbjct: 421 QVSANVKRLMNGETSSELRNNVEKVKRHLKDAVTTVGSSETNFNLFVSEVR 471
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
| >sp|Q9LHJ2|U82A1_ARATH UDP-glycosyltransferase 82A1 OS=Arabidopsis thaliana GN=UGT82A1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 227 bits (579), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 141/457 (30%), Positives = 237/457 (51%), Gaps = 44/457 (9%)
Query: 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHL 62
+P+++ +P PAQGHV P+L + GF + + H+R+ + + LG I
Sbjct: 6 KPKIIFIPYPAQGHVTPMLHLASAFLSRGFSPVVMTPESIHRRISATNED---LG--ITF 60
Query: 63 VSIPDGME-PWEDRNDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSM 121
+++ DG + P +D + +MP +LE L+ E + + C + D W++
Sbjct: 61 LALSDGQDRPDAPPSDFFSIENSMENIMPPQLERLLLEEDL----DVACVVVDLLASWAI 116
Query: 122 EIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSHGTPMSMQMFRIAPKMPEMNSR 181
+A + V A FWP A+ L+ IP+L+ G++ G P ++ + P+ P +++
Sbjct: 117 GVADRCGVPVAGFWPVMFAAYRLIQAIPELVRTGLVSQKGCPRQLEKTIVQPEQPLLSAE 176
Query: 182 DCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNS-----------------TYELES 224
D W IG +QK F +R ++ + +S + +L
Sbjct: 177 DLPWL-IGTPKAQKKRFKFWQRTLERTKSLRWILTSSFKDEYEDVDNHKASYKKSNDLNK 235
Query: 225 EAFTTFPELLPIGPLL---ASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSF-T 280
E P++L +GPL A+N + T FW ED +CL WL +Q P+SV+Y+SFGS+ +
Sbjct: 236 ENNGQNPQILHLGPLHNQEATNNITITKTSFWEEDMSCLGWLQEQNPNSVIYISFGSWVS 295
Query: 281 ILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAA---RGQMISWAPQ 337
+ + Q LAL LE RPFLW + + P GF RV +G+++SWAPQ
Sbjct: 296 PIGESNIQTLALALEASGRPFLWA----LNRVWQEGLPPGFVHRVTITKNQGRIVSWAPQ 351
Query: 338 LRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRD 397
L VL + S+ C+++HCGWNSTME V++ LC+P GDQF+N +YI D WK+G++
Sbjct: 352 LEVLRNDSVGCYVTHCGWNSTMEAVASSRRLLCYPVAGDQFVNCKYIVDVWKIGVRLSG- 410
Query: 398 EGGIITREEIKNKVDQVLGNQDFKARALELKEKAMSS 434
+E+++ + +V+ +QD R +L+++AM +
Sbjct: 411 ----FGEKEVEDGLRKVMEDQDMGERLRKLRDRAMGN 443
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
| >sp|Q9LTH2|U76E2_ARATH UDP-glycosyltransferase 76E2 OS=Arabidopsis thaliana GN=UGT76E2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 222 bits (566), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 135/459 (29%), Positives = 239/459 (52%), Gaps = 36/459 (7%)
Query: 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVS 64
R++++P PAQGHV P+++ + L GF +T V T N RV S ++ H ++
Sbjct: 10 RIVLVPVPAQGHVTPMMQLGKALHSKGFSITVVLTQSN--RVSSSKDFSDF-----HFLT 62
Query: 65 IPDGMEPWEDRNDLG--KLIEKCLQVMPGKLEELIEEI-NSREDEKIDCFIADGNIGWSM 121
IP + D +LG K + K Q+ ++ I ++ + + + I C + D + +S
Sbjct: 63 IPGSLTE-SDLQNLGPQKFVLKLNQICEASFKQCIGQLLHEQCNNDIACVVYDEYMYFSH 121
Query: 122 EIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSHGTPMSMQMFRIAPKMPEMNSR 181
K+ + VF +SA + + ++ + + P + ++ P + + +
Sbjct: 122 AAVKEFQLPSVVFSTTSATAFVCRSVLSRVNAESFLIDMKDPETQD--KVFPGLHPLRYK 179
Query: 182 DCFWAHIGDWTSQ-KIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTFPELL-----P 235
D + G S K++ + + T + + +N C LES + + L P
Sbjct: 180 DLPTSVFGPIESTLKVYSETVNTRTASAVIINSASC-----LESSSLARLQQQLQVPVYP 234
Query: 236 IGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLE 295
IGPL + + ED +C++WL++Q+ +SV+Y+S GS ++D E+A GL
Sbjct: 235 IGPLHIT---ASAPSSLLEEDRSCVEWLNKQKSNSVIYISLGSLALMDTKDMLEMAWGLS 291
Query: 296 LCKRPFLWVVRPDIT--TDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHC 353
+PFLWVVRP ++ + PE F V+ RG ++ WAPQ+ VL HP++ F SHC
Sbjct: 292 NSNQPFLWVVRPGSIPGSEWTESLPEEFNRLVSERGYIVKWAPQMEVLRHPAVGGFWSHC 351
Query: 354 GWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQ 413
GWNST+E + G+P +C P+ GDQ +N RY+ W++G++ + D + +E ++ V+
Sbjct: 352 GWNSTVESIGEGVPMICRPFTGDQKVNARYLERVWRIGVQLEGD----LDKETVERAVEW 407
Query: 414 VLGNQ---DFKARALELKEKAMSSVREGGSSYKTFQNFL 449
+L ++ + + RA++LKEK +SVR GGSS + +F+
Sbjct: 408 LLVDEEGAEMRKRAIDLKEKIETSVRSGGSSCSSLDDFV 446
|
Possesses low quercetin 3-O-glucosyltransferase and 7-O-glucosyltransferase activities in vitro. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 466 | ||||||
| 225451709 | 454 | PREDICTED: UDP-glycosyltransferase 83A1 | 0.974 | 1.0 | 0.640 | 0.0 | |
| 224141477 | 454 | predicted protein [Populus trichocarpa] | 0.974 | 1.0 | 0.621 | 1e-176 | |
| 224080163 | 454 | predicted protein [Populus trichocarpa] | 0.974 | 1.0 | 0.621 | 1e-175 | |
| 255570294 | 452 | UDP-glucuronosyltransferase, putative [R | 0.961 | 0.991 | 0.633 | 1e-173 | |
| 359488535 | 451 | PREDICTED: LOW QUALITY PROTEIN: UDP-glyc | 0.967 | 1.0 | 0.610 | 1e-170 | |
| 225451707 | 454 | PREDICTED: UDP-glycosyltransferase 83A1 | 0.967 | 0.993 | 0.632 | 1e-168 | |
| 225451705 | 454 | PREDICTED: UDP-glycosyltransferase 83A1 | 0.974 | 1.0 | 0.610 | 1e-166 | |
| 147767625 | 568 | hypothetical protein VITISV_004920 [Viti | 0.969 | 0.795 | 0.610 | 1e-165 | |
| 255570312 | 488 | UDP-glucuronosyltransferase, putative [R | 0.972 | 0.928 | 0.577 | 1e-156 | |
| 225451711 | 453 | PREDICTED: UDP-glycosyltransferase 83A1 | 0.972 | 1.0 | 0.570 | 1e-156 |
| >gi|225451709|ref|XP_002276804.1| PREDICTED: UDP-glycosyltransferase 83A1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 639 bits (1649), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 291/454 (64%), Positives = 361/454 (79%)
Query: 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQI 60
M P +LV+P PAQGHVIPLLE SQ L KHGF++TFVNT++NHKRV +L K+ +G+ I
Sbjct: 1 MGNPHILVIPYPAQGHVIPLLELSQHLVKHGFKITFVNTEFNHKRVTNALTKKDDVGDHI 60
Query: 61 HLVSIPDGMEPWEDRNDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWS 120
HLVSIPDG+E WEDRNDLGKL E ++MP KLEELIEEIN +D+ I C IAD ++GW+
Sbjct: 61 HLVSIPDGLEAWEDRNDLGKLTEVGFRIMPKKLEELIEEINGSDDDNITCVIADESMGWA 120
Query: 121 MEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSHGTPMSMQMFRIAPKMPEMNS 180
+E+A+KM ++ AVFWP+SA +AL F + KLIDDGI+D++GTP QM +++ MP MN+
Sbjct: 121 LEVAEKMGIQRAVFWPASATLLALFFSVQKLIDDGIVDNNGTPTKHQMIKLSETMPAMNT 180
Query: 181 RDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTFPELLPIGPLL 240
WA IGD ++QKI FD++ RN +A++ + CNS+Y+LE FT PE+LPIGPLL
Sbjct: 181 AQFVWACIGDLSTQKIVFDVILRNNKALLLAEWVICNSSYDLEPGTFTLAPEILPIGPLL 240
Query: 241 ASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRP 300
AS+RLG +AGYFW EDS CL+WLDQQ P SV+YV+FGSFT+ D+ QFQELALGLEL RP
Sbjct: 241 ASSRLGKSAGYFWPEDSTCLQWLDQQPPCSVIYVAFGSFTVFDKTQFQELALGLELSNRP 300
Query: 301 FLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTME 360
FLWVVRPDIT+ ND YPEGFQERV+++G M+ WAPQ VL+HPSIACFLSHCGWNSTME
Sbjct: 301 FLWVVRPDITSGTNDAYPEGFQERVSSQGLMVGWAPQQMVLSHPSIACFLSHCGWNSTME 360
Query: 361 GVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDF 420
GVSNG+PFLCWPYF DQFLN+ YICD WKVGL FD E GII REEI+NK++ + G +F
Sbjct: 361 GVSNGVPFLCWPYFADQFLNKTYICDIWKVGLGFDPAENGIIMREEIRNKMELLFGESEF 420
Query: 421 KARALELKEKAMSSVREGGSSYKTFQNFLQWVKT 454
KARAL LKE AM+ V+EGG S K F+NF++W+K
Sbjct: 421 KARALNLKEMAMNGVQEGGCSSKNFKNFIEWIKA 454
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224141477|ref|XP_002324098.1| predicted protein [Populus trichocarpa] gi|222867100|gb|EEF04231.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 623 bits (1607), Expect = e-176, Method: Compositional matrix adjust.
Identities = 282/454 (62%), Positives = 358/454 (78%)
Query: 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQI 60
M P ++V+P PAQGHVIP +E SQCLAK GF++TFVNT+YNHKRV+++L NYLG +I
Sbjct: 1 MGNPHIVVIPYPAQGHVIPFMELSQCLAKQGFKITFVNTEYNHKRVLKALGENNYLGSEI 60
Query: 61 HLVSIPDGMEPWEDRNDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWS 120
LVSIPDG+EPWEDRN+LGKL + QVMPGKL++LI IN +E+I I D ++GW+
Sbjct: 61 SLVSIPDGLEPWEDRNELGKLTKAIFQVMPGKLQQLINRINMSGEERITGIITDWSMGWA 120
Query: 121 MEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSHGTPMSMQMFRIAPKMPEMNS 180
+E+A+KMN+R A+FWP+S A + + I KL++DGIID+ GTP+ Q ++APKMP M++
Sbjct: 121 LEVAEKMNIRRAIFWPASTAVLCSMLSISKLLNDGIIDNDGTPLKNQTIQLAPKMPVMDT 180
Query: 181 RDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTFPELLPIGPLL 240
+ WA + D+T+QKI FD++ + + ++ NS YELE AF+ P ++PIGP L
Sbjct: 181 ANFAWACLRDFTTQKIIFDVMVKTIETVKVEDWIVSNSAYELEPGAFSFAPNIIPIGPRL 240
Query: 241 ASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRP 300
ASNRLG+ GYFW EDS CLKWLDQQ P+SVVY++FGSFT+ DQ QFQELALGLEL RP
Sbjct: 241 ASNRLGDQQGYFWPEDSTCLKWLDQQPPNSVVYIAFGSFTVFDQTQFQELALGLELSNRP 300
Query: 301 FLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTME 360
FLWVVRPDIT + ND YPEGFQERVA RGQ++ WAPQ +VL+HPS+ CFLSHCGWNSTME
Sbjct: 301 FLWVVRPDITAETNDAYPEGFQERVANRGQIVGWAPQQKVLSHPSVLCFLSHCGWNSTME 360
Query: 361 GVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDF 420
GVSNG+PFLCWPYF DQFLNE YICD WKVGLK D+++ GI+T EEIKNKV++V+G++ F
Sbjct: 361 GVSNGVPFLCWPYFADQFLNETYICDVWKVGLKLDKNQSGIVTGEEIKNKVEKVVGDEKF 420
Query: 421 KARALELKEKAMSSVREGGSSYKTFQNFLQWVKT 454
KARALELK AM +V EGG S F+NF++W+K
Sbjct: 421 KARALELKRLAMQNVGEGGCSSNNFKNFVEWMKA 454
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224080163|ref|XP_002306038.1| predicted protein [Populus trichocarpa] gi|222849002|gb|EEE86549.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 619 bits (1597), Expect = e-175, Method: Compositional matrix adjust.
Identities = 282/454 (62%), Positives = 357/454 (78%)
Query: 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQI 60
M +P ++V+P PAQGHVIP +E SQCL K GF++TFV+T+YNHKRV+++L+G LG +I
Sbjct: 1 MGKPHIVVIPYPAQGHVIPFMELSQCLVKQGFKITFVSTEYNHKRVLKALRGNINLGGEI 60
Query: 61 HLVSIPDGMEPWEDRNDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWS 120
LVS+PDG+E DRN+LGKL + QVMPGKLEELI+ IN E+EKI C I D ++GW+
Sbjct: 61 SLVSLPDGLEACGDRNELGKLSKAIFQVMPGKLEELIDRINMTEEEKITCIITDWSMGWA 120
Query: 121 MEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSHGTPMSMQMFRIAPKMPEMNS 180
+E+A+KM +R A++WP++AA + + IPKL+ DGIID GTP++ QM ++AP MP M++
Sbjct: 121 LEVAEKMKIRRAIYWPAAAAILCSLISIPKLLSDGIIDGDGTPLNNQMIQLAPTMPAMDT 180
Query: 181 RDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTFPELLPIGPLL 240
+ WA +GD+T+QKI FDL+ + A + NS Y+LE AF+ P +LPIGPLL
Sbjct: 181 ANFVWACLGDFTTQKIIFDLMVKTNEAAKMADRIISNSAYDLEPGAFSFAPNILPIGPLL 240
Query: 241 ASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRP 300
ASNRLG+ GYFW EDS CLKWLDQQ P SVVYV+FGSFT+ D+ QFQELA GLEL R
Sbjct: 241 ASNRLGDQLGYFWPEDSTCLKWLDQQPPKSVVYVAFGSFTVFDKTQFQELAQGLELSSRS 300
Query: 301 FLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTME 360
FLWVVRPDITT+ ND YPEGFQERVA RG+M+ WAPQ +VL+HPSI+CFLSHCGWNSTME
Sbjct: 301 FLWVVRPDITTETNDAYPEGFQERVATRGRMVGWAPQQKVLSHPSISCFLSHCGWNSTME 360
Query: 361 GVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDF 420
GVSNG+PFLCWPYF DQFLNE YICD WKVGLKFD+++ GIITREEIKNKV+ V+ ++
Sbjct: 361 GVSNGVPFLCWPYFADQFLNETYICDVWKVGLKFDKNKCGIITREEIKNKVETVISDEKI 420
Query: 421 KARALELKEKAMSSVREGGSSYKTFQNFLQWVKT 454
KARA ELK AM +V E G S + F+NF++W+K+
Sbjct: 421 KARAAELKRLAMQNVGEAGYSSENFKNFIEWIKS 454
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255570294|ref|XP_002526107.1| UDP-glucuronosyltransferase, putative [Ricinus communis] gi|223534604|gb|EEF36301.1| UDP-glucuronosyltransferase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 613 bits (1582), Expect = e-173, Method: Compositional matrix adjust.
Identities = 285/450 (63%), Positives = 355/450 (78%), Gaps = 2/450 (0%)
Query: 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQI 60
M + VL +P PAQGHVIP+LE SQCL KHGF +TFVNTDYNHKRV+ +L G ++LG+QI
Sbjct: 1 MGKLHVLAIPYPAQGHVIPMLELSQCLVKHGFEITFVNTDYNHKRVLNAL-GNDFLGDQI 59
Query: 61 HLVSIPDGMEPWEDRNDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWS 120
LVSIPDG+E WEDRNDLGKL E VMPGKLEELI N+ +D+KI C IAD N GW+
Sbjct: 60 SLVSIPDGLELWEDRNDLGKLTEAIFNVMPGKLEELINRSNASKDKKITCIIADANNGWA 119
Query: 121 MEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSHGTPMSMQMFRIAPKMPEMNS 180
+E+A+KMN+R A FWP+SAA ++ +F + KLIDDGIID++GTP+ Q+ ++ P MP +++
Sbjct: 120 LEVAEKMNIRCAAFWPASAALLSSLFTVQKLIDDGIIDNNGTPLKNQIIQMDPTMPAIST 179
Query: 181 RDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTFPELLPIGPLL 240
+ W IGD T+QKI FD++ RN +A+ ++ CNS Y+LE A T P++LPIGP+L
Sbjct: 180 ENLVWNCIGDSTTQKIIFDVIFRNNKAVKVADWIICNSAYDLEPGALTLSPKILPIGPML 239
Query: 241 ASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRP 300
AS+R G++AGYFW +D CLKWLDQQ P SV+YV+FGSFT+ D+ QFQELALGLEL R
Sbjct: 240 ASSRQGDSAGYFWQKDLTCLKWLDQQPPKSVIYVAFGSFTVFDKTQFQELALGLELSGRS 299
Query: 301 FLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTME 360
F+WVVRPDITTD N YPEGF ERV +RGQM+ WAPQ +VLNHPSIACFLSHCGWNSTME
Sbjct: 300 FIWVVRPDITTDTN-AYPEGFLERVGSRGQMVGWAPQQKVLNHPSIACFLSHCGWNSTME 358
Query: 361 GVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDF 420
GV+NG+PFLCWPYF DQFLNE YICD WKVGLKF++ + GIITREEIK+KV +VL ++
Sbjct: 359 GVANGVPFLCWPYFADQFLNESYICDVWKVGLKFNKSKSGIITREEIKDKVGKVLSDEGV 418
Query: 421 KARALELKEKAMSSVREGGSSYKTFQNFLQ 450
ARA ELKE AM +V E G S K ++F++
Sbjct: 419 IARASELKEIAMINVGEYGYSSKILKHFIE 448
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359488535|ref|XP_003633773.1| PREDICTED: LOW QUALITY PROTEIN: UDP-glycosyltransferase 83A1-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 603 bits (1555), Expect = e-170, Method: Compositional matrix adjust.
Identities = 277/454 (61%), Positives = 353/454 (77%), Gaps = 3/454 (0%)
Query: 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQI 60
M VLVMP PAQGHVIP +E SQ L KHGF+VTFVNTD++ +R+V+S GK+ +G+QI
Sbjct: 1 MGSLHVLVMPFPAQGHVIPFMELSQNLVKHGFKVTFVNTDFSQERIVKSFTGKDNVGDQI 60
Query: 61 HLVSIPDGMEPWEDRNDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWS 120
LVSIPDG+E WEDRND+GK E ++VMP KLEEL++EIN R+D KI C IADGN+GW+
Sbjct: 61 RLVSIPDGLEAWEDRNDMGKSCEGIVRVMPKKLEELMQEINGRDDNKITCVIADGNMGWA 120
Query: 121 MEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSHGTPMSMQMFRIAPKMPEMNS 180
+E+A+KM ++ AVF P++AA + L +R+ KLIDDGI+D+ GTP+ Q F+++P MP +N+
Sbjct: 121 LEVAEKMGIKRAVFLPAAAAMMVLAYRMQKLIDDGIVDNDGTPIKNQNFQLSPNMPPINT 180
Query: 181 RDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTFPELLPIGPLL 240
+ WA +GD T+Q++ L RN+ ++ ++ CNSTY+LE EAFT LLP+GPLL
Sbjct: 181 ANLPWACMGDSTAQRLVSKYLLRNSISITVADWLICNSTYDLEPEAFTLAQTLLPVGPLL 240
Query: 241 ASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRP 300
ASNR NTAG+FW EDS CL+WLDQQ SV+YV+FGSFT+ D+ QF +LALGLELC RP
Sbjct: 241 ASNRQANTAGHFWPEDSTCLEWLDQQPACSVIYVAFGSFTVFDKAQFXKLALGLELCNRP 300
Query: 301 FLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTME 360
FLWVVRPDITT AND YPEGFQERV+ RG WAPQ +VL+HPS+ACFLSHCGWNS +E
Sbjct: 301 FLWVVRPDITTGANDAYPEGFQERVSTRG---XWAPQQKVLSHPSVACFLSHCGWNSVLE 357
Query: 361 GVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDF 420
GVSNG+PFLCWPYF DQ N+ YICD W+VGL DE G+I EEIKNKVD++L ++ F
Sbjct: 358 GVSNGVPFLCWPYFADQIFNQGYICDVWRVGLGLSPDERGVILGEEIKNKVDELLIDEKF 417
Query: 421 KARALELKEKAMSSVREGGSSYKTFQNFLQWVKT 454
KARA+ELKE +V+EGG SY NF++W+K+
Sbjct: 418 KARAMELKEMTALNVKEGGKSYSNLMNFIEWIKS 451
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225451707|ref|XP_002279299.1| PREDICTED: UDP-glycosyltransferase 83A1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 597 bits (1540), Expect = e-168, Method: Compositional matrix adjust.
Identities = 286/452 (63%), Positives = 354/452 (78%), Gaps = 1/452 (0%)
Query: 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHL 62
+P VL +P PAQGHVIPL+E SQ L K GF+VTFVN+D+NHKRVV +L K+ +G QI L
Sbjct: 4 KPHVLALPYPAQGHVIPLIELSQWLVKLGFKVTFVNSDFNHKRVVNALSAKDDIGGQIRL 63
Query: 63 VSIPDGMEPWEDRNDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSME 122
VSIPDG+E WEDRNDLGKL + L+VMPGKLEELIEEIN +DE I C IADGN+GW+M
Sbjct: 64 VSIPDGLEAWEDRNDLGKLTKAILRVMPGKLEELIEEINGSDDE-ITCVIADGNLGWAMG 122
Query: 123 IAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSHGTPMSMQMFRIAPKMPEMNSRD 182
+A+KM ++ A FWP++AA +AL+F + KL+DDGI+ + G P+ QM +++ MP MN+
Sbjct: 123 VAEKMGIKRAAFWPAAAALLALIFSVRKLVDDGILTNEGIPVKNQMIKLSETMPAMNTAH 182
Query: 183 CFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTFPELLPIGPLLAS 242
W IGD +QK FDL+ RN + ++ + CNS Y+LE AF PE+LPIGPLLAS
Sbjct: 183 FAWTCIGDLNTQKFLFDLIRRNNKDILPAEWLVCNSIYDLEPAAFNLAPEMLPIGPLLAS 242
Query: 243 NRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRPFL 302
NRLG + G FW EDS CL+WLD Q SV+YV+FGSFT+ D+ QFQELALGLEL PFL
Sbjct: 243 NRLGKSIGNFWPEDSTCLRWLDNQTACSVIYVAFGSFTVFDETQFQELALGLELTNSPFL 302
Query: 303 WVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGV 362
WVVRPDITT ++ YPEGFQERV RG M+ WAPQ +VL+HPSIACFLSHCGWNSTMEGV
Sbjct: 303 WVVRPDITTGKHEDYPEGFQERVGTRGLMVGWAPQQKVLSHPSIACFLSHCGWNSTMEGV 362
Query: 363 SNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKA 422
SNG+PFLCWPYF DQFLN+ YICD WKVGL F+RDE GII + EIKNKV+Q+L ++ KA
Sbjct: 363 SNGVPFLCWPYFADQFLNQGYICDVWKVGLGFNRDERGIIQQGEIKNKVNQLLLDEKIKA 422
Query: 423 RALELKEKAMSSVREGGSSYKTFQNFLQWVKT 454
RA+ LKE AM+SV EGG+S+K F+NF++W+K+
Sbjct: 423 RAMVLKEMAMNSVTEGGNSHKNFKNFIEWIKS 454
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225451705|ref|XP_002279246.1| PREDICTED: UDP-glycosyltransferase 83A1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 590 bits (1521), Expect = e-166, Method: Compositional matrix adjust.
Identities = 277/454 (61%), Positives = 352/454 (77%)
Query: 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQI 60
M VL +P AQGHVIPL+E SQ L HGF+VTFVNTD++ +R+V+S GK+ + +QI
Sbjct: 1 MGSLHVLAIPYAAQGHVIPLMELSQNLVMHGFKVTFVNTDFSQERIVKSFAGKDDVRDQI 60
Query: 61 HLVSIPDGMEPWEDRNDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWS 120
LVSIPDG+E WEDRNDLGK E L+VMP KLEELI+EIN +D +I C IADG++GW+
Sbjct: 61 RLVSIPDGLEAWEDRNDLGKACEGILRVMPKKLEELIQEINRTDDHEIACVIADGHMGWA 120
Query: 121 MEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSHGTPMSMQMFRIAPKMPEMNS 180
+E+A+K+ ++ A FWPS+AA + L FR+ LIDDGI+D GTP+ Q F ++P MP +N+
Sbjct: 121 LEVAEKLGIKRAAFWPSAAAMMVLTFRMQNLIDDGIVDDDGTPVKSQKFHLSPNMPTINT 180
Query: 181 RDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTFPELLPIGPLL 240
+ W IGD T+Q + F L RN +++ ++ CNSTY+LE +AF+ LLP+GPLL
Sbjct: 181 ANLPWTSIGDSTAQTLVFKYLLRNNKSITVADWLICNSTYDLEPDAFSLAQTLLPVGPLL 240
Query: 241 ASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRP 300
ASNR NTAG+FW EDS CL+WLDQQ SV+YV+FGSFT+ D+ QF+ELALGLELC RP
Sbjct: 241 ASNRQANTAGHFWPEDSTCLEWLDQQPACSVIYVAFGSFTVFDKAQFRELALGLELCNRP 300
Query: 301 FLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTME 360
FLWVVRPDI+ AND YPEGFQERV+ RG M+ WAPQ +VL+HPS+ACFLSHCGWNSTME
Sbjct: 301 FLWVVRPDISAGANDAYPEGFQERVSTRGLMVGWAPQQKVLSHPSVACFLSHCGWNSTME 360
Query: 361 GVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDF 420
GVSNG+PFLCWPYFGDQ LN+ YICD W+VGL D DE G+I EEI+NKVDQ+L ++ F
Sbjct: 361 GVSNGVPFLCWPYFGDQILNKGYICDVWRVGLGLDPDERGVILGEEIQNKVDQLLMDEKF 420
Query: 421 KARALELKEKAMSSVREGGSSYKTFQNFLQWVKT 454
KARA+ELKE +VREGG S+ +NF++W+K+
Sbjct: 421 KARAMELKEMTGHNVREGGKSHNNLKNFIEWIKS 454
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147767625|emb|CAN60198.1| hypothetical protein VITISV_004920 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 588 bits (1517), Expect = e-165, Method: Compositional matrix adjust.
Identities = 276/452 (61%), Positives = 350/452 (77%)
Query: 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQI 60
M VL +P AQGHVIPL+E SQ L HGF+VTFVNTD++ +R+V+S GK+ + +QI
Sbjct: 1 MGSLHVLAIPYAAQGHVIPLMELSQNLVMHGFKVTFVNTDFSQERIVKSFAGKDDVRDQI 60
Query: 61 HLVSIPDGMEPWEDRNDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWS 120
LVSIPDG+E WEDRNDLGK E L+VMP KLEELI+EIN +D +I C IADG++GW+
Sbjct: 61 RLVSIPDGLEAWEDRNDLGKACEGILRVMPKKLEELIQEINRTDDHEIACVIADGHMGWA 120
Query: 121 MEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSHGTPMSMQMFRIAPKMPEMNS 180
+E+A+K+ ++ A FWPS+AA + L FR+ LIDDGI+D GTP+ Q F ++P MP +N+
Sbjct: 121 LEVAEKLGIKRAAFWPSAAAMMVLTFRMQNLIDDGIVDDDGTPVKSQKFHLSPNMPTINT 180
Query: 181 RDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTFPELLPIGPLL 240
+ W IGD T+Q + F L RN +++ ++ CNSTY+LE +AF+ LLP+GPLL
Sbjct: 181 ANLPWTSIGDSTAQTLVFKYLLRNNKSITVADWLICNSTYDLEPDAFSLAQTLLPVGPLL 240
Query: 241 ASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRP 300
ASNR NTAG+FW EDS CL+WLDQQ SV+YV+FGSFT+ D+ QF+ELALGLELC RP
Sbjct: 241 ASNRQANTAGHFWPEDSTCLEWLDQQPACSVIYVAFGSFTVFDKAQFRELALGLELCNRP 300
Query: 301 FLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTME 360
FLWVVRPDI+ AND YPEGFQERV+ RG M+ WAPQ +VL+HPS+ACFLSHCGWNSTME
Sbjct: 301 FLWVVRPDISAGANDAYPEGFQERVSTRGLMVGWAPQQKVLSHPSVACFLSHCGWNSTME 360
Query: 361 GVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDF 420
GVSNG+PFLCWPYFGDQ LN+ YICD W+VGL D DE G+I EEI+NKVDQ+L ++ F
Sbjct: 361 GVSNGVPFLCWPYFGDQILNKGYICDVWRVGLGLDPDERGVILGEEIQNKVDQLLMDEKF 420
Query: 421 KARALELKEKAMSSVREGGSSYKTFQNFLQWV 452
KARA+ELKE +VREGG S+ +NF++W+
Sbjct: 421 KARAMELKEMTGHNVREGGKSHNNLKNFIEWI 452
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255570312|ref|XP_002526116.1| UDP-glucuronosyltransferase, putative [Ricinus communis] gi|223534613|gb|EEF36310.1| UDP-glucuronosyltransferase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 558 bits (1439), Expect = e-156, Method: Compositional matrix adjust.
Identities = 262/454 (57%), Positives = 342/454 (75%), Gaps = 1/454 (0%)
Query: 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQI 60
M P +LV+P PAQGH+IPL+ SQCLA++GFR+TFVN++ NH+ + + +YL QI
Sbjct: 34 MGNPHILVIPYPAQGHIIPLMVLSQCLARNGFRITFVNSESNHQLIKNASASNDYLDNQI 93
Query: 61 HLVSIPDGMEPWEDRNDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWS 120
HLVSIPDG++ EDRN GK E L+VMPGK+EELIEEINS + +KI C +AD +IGW+
Sbjct: 94 HLVSIPDGLQSSEDRNKPGKSSEAILRVMPGKVEELIEEINSSDSDKISCVLADQSIGWA 153
Query: 121 MEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSHGTPMSMQMFRIAPKMPEMNS 180
+EIA+K +R A F P++AA + L F IPKLI++GI+D HGTP Q+ R++P MP MN+
Sbjct: 154 LEIAEKKGIRRAAFCPAAAAQLVLGFSIPKLIEEGIMDEHGTPTKEQIIRLSPAMPAMNT 213
Query: 181 RDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTFPELLPIGPLL 240
WA +G+ +QK F L+ +N +AM ++ CNSTYELE EAF P++LPIGP+
Sbjct: 214 AKFVWACLGNKEAQKNIFGLMVKNNKAMKLTDWLLCNSTYELEPEAFNLAPQILPIGPIS 273
Query: 241 ASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRP 300
ASNR ++ G FW EDS CL+WLDQQ SV+YV+FGS TI QFQELA+GLEL RP
Sbjct: 274 ASNRQEDSVGNFWSEDSTCLQWLDQQPQHSVIYVAFGSLTIFHPTQFQELAIGLELSNRP 333
Query: 301 FLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTME 360
FLWVVRPD + + ND + E FQ+RV RG+M+SWAPQ +VL HPS+ACF+SHCGWNST E
Sbjct: 334 FLWVVRPDTSKEKNDGFLEEFQDRVGNRGKMVSWAPQQKVLAHPSVACFVSHCGWNSTTE 393
Query: 361 GVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDF 420
GVSNGIPFLCWPYF DQFLN+ YICD WK GL +RD+ G+ITR E+ NK++++L +F
Sbjct: 394 GVSNGIPFLCWPYFADQFLNQSYICDIWKTGLGLNRDQNGMITRGEVVNKLEKLLRTGEF 453
Query: 421 KARALELKEKAMSSVRE-GGSSYKTFQNFLQWVK 453
K RAL+LKE ++SV+E GSSY+ F+NF++W+K
Sbjct: 454 KTRALDLKEIVINSVKESSGSSYQNFKNFVKWMK 487
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225451711|ref|XP_002276825.1| PREDICTED: UDP-glycosyltransferase 83A1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 557 bits (1436), Expect = e-156, Method: Compositional matrix adjust.
Identities = 259/454 (57%), Positives = 340/454 (74%), Gaps = 1/454 (0%)
Query: 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQI 60
M P V+V+P PAQGHVIPL+EFS CL +HG RVTF+NT++NH RV+ + ++ +G+Q+
Sbjct: 1 MGNPHVVVIPWPAQGHVIPLMEFSLCLVEHGCRVTFINTEFNHNRVMNAFTERHTIGDQL 60
Query: 61 HLVSIPDGMEPWEDRNDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWS 120
LVS+P G+E ED+ KL E Q MP K+EEL+EEINS + + I C ++D +IGW
Sbjct: 61 RLVSVP-GLEFHEDKERPAKLTEGIWQFMPQKVEELMEEINSVDGDGITCVVSDQSIGWG 119
Query: 121 MEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSHGTPMSMQMFRIAPKMPEMNS 180
+EIA KM + A F+P+SA +AL +PKLI+DG+I+ G P+ QM +++P P +N+
Sbjct: 120 LEIAAKMGIPQAAFFPASALVLALGQSVPKLIEDGVINCDGIPIEHQMIQLSPTAPAINT 179
Query: 181 RDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTFPELLPIGPLL 240
++ W +G+ T QK F++ RN A ++ F NSTY+ E AF P+L+PIGPL+
Sbjct: 180 KNFPWVRMGNVTMQKATFEIGFRNREAAEKADWFFSNSTYDFEPAAFALIPKLIPIGPLV 239
Query: 241 ASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRP 300
ASNR GN+AG FW ED CL+WL+QQ P SV+YV+FGS TI +Q QFQELALGLEL P
Sbjct: 240 ASNRHGNSAGNFWPEDQTCLEWLNQQPPCSVIYVAFGSSTIFNQTQFQELALGLELSNMP 299
Query: 301 FLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTME 360
FLWVVRPD T ND YPEGFQ+RVA +GQ++ WAPQ +VL HPS+ACFLSHCGWNST+E
Sbjct: 300 FLWVVRPDGTDGKNDAYPEGFQDRVATQGQIVGWAPQQKVLGHPSVACFLSHCGWNSTVE 359
Query: 361 GVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDF 420
GVSNG+PFLCWPYF DQF+NE YICD WK+GL F+ DE GIITR+EIKNKV Q+LG++ F
Sbjct: 360 GVSNGVPFLCWPYFADQFVNETYICDVWKIGLGFNPDENGIITRKEIKNKVGQLLGDEKF 419
Query: 421 KARALELKEKAMSSVREGGSSYKTFQNFLQWVKT 454
++RAL LKE A+ SV+EGG S+ F+NF++W+K
Sbjct: 420 RSRALNLKEMAIDSVKEGGPSHNNFKNFVEWLKA 453
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 466 | ||||||
| TAIR|locus:2078608 | 464 | AT3G02100 [Arabidopsis thalian | 0.948 | 0.952 | 0.451 | 8.1e-108 | |
| TAIR|locus:2196496 | 479 | UGT85A5 "UDP-glucosyl transfer | 0.937 | 0.912 | 0.330 | 8.5e-65 | |
| TAIR|locus:2009557 | 489 | UGT85A1 [Arabidopsis thaliana | 0.517 | 0.492 | 0.357 | 2.3e-62 | |
| TAIR|locus:2091628 | 461 | AT3G22250 [Arabidopsis thalian | 0.418 | 0.422 | 0.402 | 1.6e-61 | |
| TAIR|locus:2148378 | 449 | UGT76E2 "UDP-glucosyl transfer | 0.918 | 0.953 | 0.292 | 2.9e-55 | |
| TAIR|locus:2148363 | 453 | UGT76E1 "UDP-glucosyl transfer | 0.927 | 0.953 | 0.291 | 3.7e-55 | |
| TAIR|locus:2057976 | 490 | AT2G36970 [Arabidopsis thalian | 0.952 | 0.906 | 0.292 | 6.1e-55 | |
| TAIR|locus:2075120 | 451 | UGT76E11 "UDP-glucosyl transfe | 0.933 | 0.964 | 0.271 | 7e-54 | |
| UNIPROTKB|Q9AT54 | 476 | togt1 "Phenylpropanoid:glucosy | 0.933 | 0.913 | 0.325 | 1.5e-53 | |
| TAIR|locus:2075215 | 458 | UGT76E12 "AT3G46660" [Arabidop | 0.942 | 0.958 | 0.271 | 1.9e-53 |
| TAIR|locus:2078608 AT3G02100 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1066 (380.3 bits), Expect = 8.1e-108, P = 8.1e-108
Identities = 210/465 (45%), Positives = 308/465 (66%)
Query: 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQG---KNYLG 57
M RP V+V+P PAQGHV+PL+ FS+ LAK G ++TF+NT++NH R++ SL ++Y+G
Sbjct: 9 MGRPHVVVIPYPAQGHVLPLISFSRYLAKQGIQITFINTEFNHNRIISSLPNSPHEDYVG 68
Query: 58 EQIHLVSIPDGMEPW-EDRNDLGKLIEKCLQVMPGKLEELIEEINSREDEK--IDCFIAD 114
+QI+LVSIPDG+E E+RN GKL E L+ MP K+EELIE + + I C +AD
Sbjct: 69 DQINLVSIPDGLEDSPEERNIPGKLSESVLRFMPKKVEELIERMMAETSGGTIISCVVAD 128
Query: 115 GNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSHGTPMSMQMFRIAPK 174
++GW++E+A K +R F P++AAS+ L F I KLIDDG+IDS GT + +++P
Sbjct: 129 QSLGWAIEVAAKFGIRRTAFCPAAAASMVLGFSIQKLIDDGLIDSDGTVRVNKTIQLSPG 188
Query: 175 MPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTFPELL 234
MP+M + W + + SQK F L+ +N ++ + ++ CNS +ELE+ AF P ++
Sbjct: 189 MPKMETDKFVWVCLKNKESQKNIFQLMLQNNNSIESTDWLLCNSVHELETAAFGLGPNIV 248
Query: 235 PIGPLLASNRL--GNTA-GYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELA 291
PIGP+ ++ L G+T+ G F D +CL WLD+Q P SV+YV+FGSF ++ Q +ELA
Sbjct: 249 PIGPIGWAHSLEEGSTSLGSFLPHDRDCLDWLDRQIPGSVIYVAFGSFGVMGNPQLEELA 308
Query: 292 LGLELCKRPFLWVVRPDITTDANDRYPEGF-QERVAARGQMISWAPQLRVLNHPSIACFL 350
+GLEL KRP LWV D+ P +RV +++ WAPQ VL+ +I CF+
Sbjct: 309 IGLELTKRPVLWVT--------GDQQPIKLGSDRV----KVVRWAPQREVLSSGAIGCFV 356
Query: 351 SHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNK 410
SHCGWNST+EG NGIPFLC PYF DQF+N+ YICD WK+GL +RD G++ R E+K K
Sbjct: 357 SHCGWNSTLEGAQNGIPFLCIPYFADQFINKAYICDVWKIGLGLERDARGVVPRLEVKKK 416
Query: 411 VDQVLGNQ-DFKARALELKEKAMSSVREGGSSYKTFQNFLQWVKT 454
+D+++ + +++ RA+++KE M SV + G S + F+ W+K+
Sbjct: 417 IDEIMRDGGEYEERAMKVKEIVMKSVAKDGISCENLNKFVNWIKS 461
|
|
| TAIR|locus:2196496 UGT85A5 "UDP-glucosyl transferase 85A5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 660 (237.4 bits), Expect = 8.5e-65, P = 8.5e-65
Identities = 154/466 (33%), Positives = 244/466 (52%)
Query: 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLG--EQI 60
+P V+ +P PAQGH+ P+L+ ++ L GF VTFVNT+YNH R++ S +G N L
Sbjct: 11 KPHVVCIPFPAQGHINPMLKVAKLLYARGFHVTFVNTNYNHNRLIRS-RGPNSLDGLPSF 69
Query: 61 HLVSIPDGMEPWEDRN---DLGKLIEKCLQVMPGKLEELIEEINSRED-EKIDCFIADGN 116
SIPDG+ P E+++ D+ L E ++ +EL+ IN+ +D + C ++DG
Sbjct: 70 RFESIPDGL-PEENKDVMQDVPTLCESTMKNCLAPFKELLRRINTTKDVPPVSCIVSDGV 128
Query: 117 IGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSHGTPMSMQMFRIAPKMP 176
+ ++++ A+++ V +FW SA + I+ G+ P M
Sbjct: 129 MSFTLDAAEELGVPDVLFWTPSACGFLAYLHFYRFIEKGLSPIKDESSLDTKINWIPSMK 188
Query: 177 EMNSRDCFWAHIGDWTSQKIFFDLL----ERNTRAMIAVNFHFCNSTYELESEAFTTFPE 232
+ +D + I ++ I + +R RA + F + +++ + P+
Sbjct: 189 NLGLKD-IPSFIRATNTEDIMLNFFVHEADRAKRASAIILNTFDSLEHDVVRSIQSIIPQ 247
Query: 233 LLPIGPL-LASNR-------LGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQ 284
+ IGPL L NR +G W E+ CL WLD + P+SVVYV+FGS T++
Sbjct: 248 VYTIGPLHLFVNRDIDEESDIGQIGTNMWREEMECLDWLDTKSPNSVVYVNFGSITVMSA 307
Query: 285 VQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHP 344
Q E A GL K+ FLWV+RPD+ P F A R + SW PQ +VL+HP
Sbjct: 308 KQLVEFAWGLAATKKDFLWVIRPDLVAGDVPMLPPDFLIETANRRMLASWCPQEKVLSHP 367
Query: 345 SIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITR 404
++ FL+H GWNST+E +S G+P +CWP+F +Q N +Y CD W+VG++ GG + R
Sbjct: 368 AVGGFLTHSGWNSTLESLSGGVPMVCWPFFAEQQTNCKYCCDEWEVGMEI----GGDVRR 423
Query: 405 EEIKNKVDQVL-GNQDFKAR--ALELKEKAMSSVRE-GGSSYKTFQ 446
EE++ V +++ G++ K R A E + A + + GSS FQ
Sbjct: 424 EEVEELVRELMDGDKGKKMRQKAEEWQRLAEEATKPIYGSSELNFQ 469
|
|
| TAIR|locus:2009557 UGT85A1 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 425 (154.7 bits), Expect = 2.3e-62, Sum P(2) = 2.3e-62
Identities = 92/257 (35%), Positives = 139/257 (54%)
Query: 202 ERNTRAMIAVNFHFCNSTYELESEAFTTFPELLPIGPL-LASNR-------LGNTAGYFW 253
ER RA + F + +++ + P + +GPL L +NR +G + W
Sbjct: 223 ERAKRASAIILNTFDDLEHDVVHAMQSILPPVYSVGPLHLLANREIEEGSEIGMMSSNLW 282
Query: 254 CEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDA 313
E+ CL WLD + +SV+Y++FGS T+L Q E A GL + FLWV+RPD+
Sbjct: 283 KEEMECLDWLDTKTQNSVIYINFGSITVLSVKQLVEFAWGLAGSGKEFLWVIRPDLVAGE 342
Query: 314 NDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPY 373
P F R + SW PQ +VL+HP+I FL+HCGWNS +E +S G+P +CWP+
Sbjct: 343 EAMVPPDFLMETKDRSMLASWCPQEKVLSHPAIGGFLTHCGWNSILESLSCGVPMVCWPF 402
Query: 374 FGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVL-GNQDFKAR--ALELKEK 430
F DQ +N ++ CD W VG++ GG + REE++ V +++ G + K R A+E +
Sbjct: 403 FADQQMNCKFCCDEWDVGIEI----GGDVKREEVEAVVRELMDGEKGKKMREKAVEWQRL 458
Query: 431 AMSSVREG-GSSYKTFQ 446
A + GSS F+
Sbjct: 459 AEKATEHKLGSSVMNFE 475
|
|
| TAIR|locus:2091628 AT3G22250 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 416 (151.5 bits), Expect = 1.6e-61, Sum P(2) = 1.6e-61
Identities = 85/211 (40%), Positives = 130/211 (61%)
Query: 231 PELLPIGPLL---ASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTI-LDQVQ 286
P++L +GPL A+N + T FW ED +CL WL +Q P+SV+Y+SFGS+ + +
Sbjct: 242 PQILHLGPLHNQEATNNITITKTSFWEEDMSCLGWLQEQNPNSVIYISFGSWVSPIGESN 301
Query: 287 FQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAA---RGQMISWAPQLRVLNH 343
Q LAL LE RPFLW + + P GF RV +G+++SWAPQL VL +
Sbjct: 302 IQTLALALEASGRPFLWA----LNRVWQEGLPPGFVHRVTITKNQGRIVSWAPQLEVLRN 357
Query: 344 PSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIIT 403
S+ C+++HCGWNSTME V++ LC+P GDQF+N +YI D WK+G++ G
Sbjct: 358 DSVGCYVTHCGWNSTMEAVASSRRLLCYPVAGDQFVNCKYIVDVWKIGVRLS----GF-G 412
Query: 404 REEIKNKVDQVLGNQDFKARALELKEKAMSS 434
+E+++ + +V+ +QD R +L+++AM +
Sbjct: 413 EKEVEDGLRKVMEDQDMGERLRKLRDRAMGN 443
|
|
| TAIR|locus:2148378 UGT76E2 "UDP-glucosyl transferase 76E2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
Identities = 133/454 (29%), Positives = 236/454 (51%)
Query: 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVS 64
R++++P PAQGHV P+++ + L GF +T V T N RV S K++ H ++
Sbjct: 10 RIVLVPVPAQGHVTPMMQLGKALHSKGFSITVVLTQSN--RVSSS---KDF--SDFHFLT 62
Query: 65 IPDGMEPWEDRNDLG--KLIEKCLQVMPGKLEELIEEINSRE-DEKIDCFIADGNIGWSM 121
IP + D +LG K + K Q+ ++ I ++ + + I C + D + +S
Sbjct: 63 IPGSLTE-SDLQNLGPQKFVLKLNQICEASFKQCIGQLLHEQCNNDIACVVYDEYMYFSH 121
Query: 122 EIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSHGTPMSMQMFRIAPKMPEMNSR 181
K+ + VF +SA + + ++ + + P + ++ P + + +
Sbjct: 122 AAVKEFQLPSVVFSTTSATAFVCRSVLSRVNAESFLIDMKDPETQD--KVFPGLHPLRYK 179
Query: 182 DCFWAHIGDWTSQ-KIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTFPELLPIGPLL 240
D + G S K++ + + T + + +N C + L + PIGPL
Sbjct: 180 DLPTSVFGPIESTLKVYSETVNTRTASAVIINSASCLESSSLARLQQQLQVPVYPIGPLH 239
Query: 241 ASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRP 300
+ + ED +C++WL++Q+ +SV+Y+S GS ++D E+A GL +P
Sbjct: 240 IT---ASAPSSLLEEDRSCVEWLNKQKSNSVIYISLGSLALMDTKDMLEMAWGLSNSNQP 296
Query: 301 FLWVVRPDIT--TDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNST 358
FLWVVRP ++ + PE F V+ RG ++ WAPQ+ VL HP++ F SHCGWNST
Sbjct: 297 FLWVVRPGSIPGSEWTESLPEEFNRLVSERGYIVKWAPQMEVLRHPAVGGFWSHCGWNST 356
Query: 359 MEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQ 418
+E + G+P +C P+ GDQ +N RY+ W++G++ + D + +E ++ V+ +L ++
Sbjct: 357 VESIGEGVPMICRPFTGDQKVNARYLERVWRIGVQLEGD----LDKETVERAVEWLLVDE 412
Query: 419 D---FKARALELKEKAMSSVREGGSSYKTFQNFL 449
+ + RA++LKEK +SVR GGSS + +F+
Sbjct: 413 EGAEMRKRAIDLKEKIETSVRSGGSSCSSLDDFV 446
|
|
| TAIR|locus:2148363 UGT76E1 "UDP-glucosyl transferase 76E1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 569 (205.4 bits), Expect = 3.7e-55, P = 3.7e-55
Identities = 133/457 (29%), Positives = 237/457 (51%)
Query: 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVS 64
R++++P PAQGHV P+++ + L GF +T V T YN RV S K++ H ++
Sbjct: 9 RIVLVPVPAQGHVTPIMQLGKALYSKGFSITVVLTQYN--RVSSS---KDF--SDFHFLT 61
Query: 65 IPDGMEPWEDRNDLG--KLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSME 122
IP + D +LG K + K Q+ ++ I ++ + I C + D + +S
Sbjct: 62 IPGSLTE-SDLKNLGPFKFLFKLNQICEASFKQCIGQLLQEQGNDIACVVYDEYMYFSQA 120
Query: 123 IAKKMNVRGAVFWPSSAASVALVFRIPKL-IDDGIIDSHGTPMSMQMFRIAPKMPEMNSR 181
K+ + +F +SA + + ++ + ++D +S + F P + + +
Sbjct: 121 AVKEFQLPSVLFSTTSATAFVCRSVLSRVNAESFLLDMKDPKVSDKEF---PGLHPLRYK 177
Query: 182 DCFWAHIGDWTS-QKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTFPELLPIGPL- 239
D + G S K++ + + T + + +N C + L + PIGPL
Sbjct: 178 DLPTSAFGPLESILKVYSETVNIRTASAVIINSTSCLESSSLAWLQKQLQVPVYPIGPLH 237
Query: 240 LASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKR 299
+A++ + ED +CL+WL++Q+ SV+Y+S GS +++ E+A GL +
Sbjct: 238 IAASAPSSLLE----EDRSCLEWLNKQKIGSVIYISLGSLALMETKDMLEMAWGLRNSNQ 293
Query: 300 PFLWVVRPDIT--TDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNS 357
PFLWV+RP ++ + PE F V+ RG ++ WAPQ+ VL HP++ F SHCGWNS
Sbjct: 294 PFLWVIRPGSIPGSEWTESLPEEFSRLVSERGYIVKWAPQIEVLRHPAVGGFWSHCGWNS 353
Query: 358 TMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRD-EGGIITREEIKNKVDQVLG 416
T+E + G+P +C P+ GDQ +N RY+ W++G++ + + + G + R + +D+
Sbjct: 354 TLESIGEGVPMICRPFTGDQKVNARYLERVWRIGVQLEGELDKGTVERAVERLIMDEE-- 411
Query: 417 NQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVK 453
+ + R + LKEK +SV+ GSS+ + NF+ +K
Sbjct: 412 GAEMRKRVINLKEKLQASVKSRGSSFSSLDNFVNSLK 448
|
|
| TAIR|locus:2057976 AT2G36970 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 567 (204.7 bits), Expect = 6.1e-55, P = 6.1e-55
Identities = 138/471 (29%), Positives = 237/471 (50%)
Query: 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQ---GKNYL--- 56
+P ++++P P QGHVIP + + LA HGF +TFVNTD H + + Q G +
Sbjct: 8 KPHIMMIPYPLQGHVIPFVHLAIKLASHGFTITFVNTDSIHHHISTAHQDDAGDIFSAAR 67
Query: 57 --GEQ-IHLVSIPDGMEPWEDRN-DLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFI 112
G+ I ++ DG DR+ + + E L V +++LI +++ R+D + C I
Sbjct: 68 SSGQHDIRYTTVSDGFPLDFDRSLNHDQFFEGILHVFSAHVDDLIAKLSRRDDPPVTCLI 127
Query: 113 ADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSHGTPMSMQMFRIA 172
AD WS I K N+ FW A + L + + LI +G S +
Sbjct: 128 ADTFYVWSSMICDKHNLVNVSFWTEPALVLNLYYHMDLLISNGHFKSLDN--RKDVIDYV 185
Query: 173 PKMPEMNSRDCF-WAHIGDWT--SQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTT 229
P + + +D + + D + + + +L + + + +F CN+ ELE ++ +
Sbjct: 186 PGVKAIEPKDLMSYLQVSDKDVDTNTVVYRILFKAFKDVKRADFVVCNTVQELEPDSLSA 245
Query: 230 FPELLP---IGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQ 286
P IGP+ +++ + T+ W E S+C +WL + SV+YVSFGS+ + + +
Sbjct: 246 LQAKQPVYAIGPVFSTDSVVPTS--LWAE-SDCTEWLKGRPTGSVLYVSFGSYAHVGKKE 302
Query: 287 FQELALGLELCKRPFLWVVRPDIT-TDANDRYPEGFQERVAARGQMISWAPQLRVLNHPS 345
E+A GL L F+WV+RPDI ++ D P GF ++ RG ++ W Q+ V+++P+
Sbjct: 303 IVEIAHGLLLSGISFIWVLRPDIVGSNVPDFLPAGFVDQAQDRGLVVQWCCQMEVISNPA 362
Query: 346 IACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITRE 405
+ F +HCGWNS +E V G+P LC+P DQF N + + D W +G+ E ITR+
Sbjct: 363 VGGFFTHCGWNSILESVWCGLPLLCYPLLTDQFTNRKLVVDDWCIGINLC--EKKTITRD 420
Query: 406 EIKNKVDQVLGNQ---DFKARALELKEKAMSSVREGGSSYKTFQNFLQWVK 453
++ V +++ + + + ++K +V GSS F F+ V+
Sbjct: 421 QVSANVKRLMNGETSSELRNNVEKVKRHLKDAVTTVGSSETNFNLFVSEVR 471
|
|
| TAIR|locus:2075120 UGT76E11 "UDP-glucosyl transferase 76E11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 557 (201.1 bits), Expect = 7.0e-54, P = 7.0e-54
Identities = 124/457 (27%), Positives = 240/457 (52%)
Query: 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVS 64
RV+++ PAQGH+ P+++ ++ L GF +T T +N+ + V+
Sbjct: 9 RVVLVAVPAQGHISPIMQLAKTLHLKGFSITIAQTKFNYFSPSDDFT-------DFQFVT 61
Query: 65 IPDGMEPWEDRNDLGKL--IEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSME 122
IP+ + P D DLG + + K + ++ + ++ ++ +I C + D + ++
Sbjct: 62 IPESL-PESDFEDLGPIEFLHKLNKECQVSFKDCLGQLLLQQGNEIACVVYDEFMYFAEA 120
Query: 123 IAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSHGTPMSMQMFRIAPKMPEMNSRD 182
AK+ + +F +SA + KL + I+ P Q + P+ + +D
Sbjct: 121 AAKEFKLPNVIFSTTSATAFVCRSAFDKLYANSILTPLKEPKGQQN-ELVPEFHPLRCKD 179
Query: 183 CFWAHIGDWTSQ-KIFFDLLERNTRAMIAVNFHFCNSTYELES-EAFTTFPELLPIGPLL 240
+H S +++ + +++ T + + +N C + L + P + PIGPL
Sbjct: 180 FPVSHWASLESMMELYRNTVDKRTASSVIINTASCLESSSLSRLQQQLQIP-VYPIGPL- 237
Query: 241 ASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRP 300
+ + + + E+ +C++WL++Q+ +SV++VS GS +++ + E ALGL+ K+
Sbjct: 238 --HLVASASTSLLEENKSCIEWLNKQKKNSVIFVSLGSLALMEINEVIETALGLDSSKQQ 295
Query: 301 FLWVVRPDITTDAN--DRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNST 358
FLWV+RP + + P+ F + ++ RG ++ WAPQ VL+HP++ F SHCGWNST
Sbjct: 296 FLWVIRPGSVRGSEWIENLPKEFSKIISGRGYIVKWAPQKEVLSHPAVGGFWSHCGWNST 355
Query: 359 MEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRD-EGGIITREEIKNKVDQVLGN 417
+E + G+P +C P+ DQ +N RY+ WK+G++ + D + G + R + V++
Sbjct: 356 LESIGEGVPMICKPFSSDQMVNARYLECVWKIGIQVEGDLDRGAVERAVRRLMVEEE--G 413
Query: 418 QDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVKT 454
+ + RA+ LKE+ +SV GGSS+ + + F+ +++T
Sbjct: 414 EGMRKRAISLKEQLRASVISGGSSHNSLEEFVHYMRT 450
|
|
| UNIPROTKB|Q9AT54 togt1 "Phenylpropanoid:glucosyltransferase 1" [Nicotiana tabacum (taxid:4097)] | Back alignment and assigned GO terms |
|---|
Score = 554 (200.1 bits), Expect = 1.5e-53, P = 1.5e-53
Identities = 159/489 (32%), Positives = 243/489 (49%)
Query: 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLG-E- 58
M + P A GH+IP L+ ++ A G + T + T N +++Q +LG E
Sbjct: 1 MGQLHFFFFPVMAHGHMIPTLDMAKLFASRGVKATIITTPLNEFVFSKAIQRNKHLGIEI 60
Query: 59 QIHLVSIP---DGMEPWEDRNDL----GKLIE--KCLQVMPGKLEELIEEINSREDEKID 109
+I L+ P +G+ +R D KL K + +M LE+LIEE D
Sbjct: 61 EIRLIKFPAVENGLPEECERLDQIPSDEKLPNFFKAVAMMQEPLEQLIEECRP------D 114
Query: 110 CFIADGNIGWSMEIAKKMNVRGAVFWPSS--AASVALVFRIPKLIDDGIIDSHGTPMSMQ 167
C I+D + W+ + A K N+ VF +S A V R+ K + DS +
Sbjct: 115 CLISDMFLPWTTDTAAKFNIPRIVFHGTSFFALCVENSVRLNKPFKNVSSDS-------E 167
Query: 168 MFRIAPKMPE----MNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELE 223
F + P +P ++ + G+ T+ + + V F NS YELE
Sbjct: 168 TF-VVPDLPHEIKLTRTQVSPFERSGEETAMTRMIKTVRESDSKSYGVVF---NSFYELE 223
Query: 224 SEAFTTFPELL-----PIGPLLASNR-LGNTA--GYFWCEDSN-CLKWLDQQQPSSVVYV 274
++ + ++L IGPL NR + + A G D + CLKWLD ++PSSVVYV
Sbjct: 224 TDYVEHYTKVLGRRAWAIGPLSMCNRDIEDKAERGKKSSIDKHECLKWLDSKKPSSVVYV 283
Query: 275 SFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMI-S 333
FGS Q ELA+G+E + F+WVVR ++ D D PEGF+ER +G +I
Sbjct: 284 CFGSVANFTASQLHELAMGIEASGQEFIWVVRTEL--DNEDWLPEGFEERTKEKGLIIRG 341
Query: 334 WAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVG-- 391
WAPQ+ +L+H S+ F++HCGWNST+EGVS G+P + WP F +QF NE+ + + K G
Sbjct: 342 WAPQVLILDHESVGAFVTHCGWNSTLEGVSGGVPMVTWPVFAEQFFNEKLVTEVLKTGAG 401
Query: 392 ---LKFDRDEGGIITREEIKNKVDQVLGNQD---FKARALELKEKAMSSVREGGSSYKTF 445
+++ R + RE I + +V+ +++ F+ RA KE A ++ EGGSSY
Sbjct: 402 VGSIQWKRSASEGVKREAIAKAIKRVMVSEEADGFRNRAKAYKEMARKAIEEGGSSYTGL 461
Query: 446 QNFLQWVKT 454
L+ + T
Sbjct: 462 TTLLEDIST 470
|
|
| TAIR|locus:2075215 UGT76E12 "AT3G46660" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 553 (199.7 bits), Expect = 1.9e-53, P = 1.9e-53
Identities = 125/461 (27%), Positives = 242/461 (52%)
Query: 2 SRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIH 61
+R V+++P PAQGH+ P+++ ++ L GF +T V T +N+ +
Sbjct: 11 ARRSVVLVPFPAQGHISPMMQLAKTLHLKGFSITVVQTKFNY------FSPSDDFTHDFQ 64
Query: 62 LVSIPDGMEPWEDRNDLGKL--IEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGW 119
V+IP+ + P D +LG + + K + ++ + ++ ++ +I C I D + +
Sbjct: 65 FVTIPESL-PESDFKNLGPIQFLFKLNKECKVSFKDCLGQLVLQQSNEISCVIYDEFMYF 123
Query: 120 SMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSHGTPMSMQMFRIAPKMPEMN 179
+ AK+ + +F +SA + A KL + + + Q + P+ +
Sbjct: 124 AEAAAKECKLPNIIFSTTSATAFACRSVFDKLYANNV-QAPLKETKGQQEELVPEFYPLR 182
Query: 180 SRDCFWAHIGDWTS-QKIFFDLLERNTRAMIAVNFHFC--NSTYELESEAFTTFPELLPI 236
+D + S +++ + +++ T + + +N C +S+ + P + PI
Sbjct: 183 YKDFPVSRFASLESIMEVYRNTVDKRTASSVIINTASCLESSSLSFLQQQQLQIP-VYPI 241
Query: 237 GPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLEL 296
GPL + + + E+ +C++WL++Q+ +SV+Y+S GS +++ + E+A GL
Sbjct: 242 GPL---HMVASAPTSLLEENKSCIEWLNKQKVNSVIYISMGSIALMEINEIMEVASGLAA 298
Query: 297 CKRPFLWVVRPDITTDAN--DRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCG 354
+ FLWV+RP + + PE F + V RG ++ WAPQ VL+HP++ F SHCG
Sbjct: 299 SNQHFLWVIRPGSIPGSEWIESMPEEFSKMVLDRGYIVKWAPQKEVLSHPAVGGFWSHCG 358
Query: 355 WNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRD-EGGIITREEIKNKVDQ 413
WNST+E + G+P +C P+ GDQ +N RY+ WK+G++ + + + G++ R + VD+
Sbjct: 359 WNSTLESIGQGVPMICRPFSGDQKVNARYLECVWKIGIQVEGELDRGVVERAVKRLMVDE 418
Query: 414 VLGNQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVKT 454
++ + RA LKE+ +SV+ GGSS+ + + F+ +++T
Sbjct: 419 E--GEEMRKRAFSLKEQLRASVKSGGSSHNSLEEFVHFIRT 457
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9SGA8 | U83A1_ARATH | 2, ., 4, ., 1, ., - | 0.4504 | 0.9506 | 0.9547 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.4.1 | 0.691 |
| 4th Layer | 2.4.1.195 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 466 | |||
| PLN02562 | 448 | PLN02562, PLN02562, UDP-glycosyltransferase | 8e-87 | |
| PLN02410 | 451 | PLN02410, PLN02410, UDP-glucoronosyl/UDP-glucosyl | 3e-66 | |
| PLN02448 | 459 | PLN02448, PLN02448, UDP-glycosyltransferase family | 3e-65 | |
| PLN03007 | 482 | PLN03007, PLN03007, UDP-glucosyltransferase family | 1e-64 | |
| PLN02555 | 480 | PLN02555, PLN02555, limonoid glucosyltransferase | 4e-61 | |
| PLN02863 | 477 | PLN02863, PLN02863, UDP-glucoronosyl/UDP-glucosyl | 4e-59 | |
| PLN02534 | 491 | PLN02534, PLN02534, UDP-glycosyltransferase | 2e-56 | |
| PLN02210 | 456 | PLN02210, PLN02210, UDP-glucosyl transferase | 8e-54 | |
| PLN02173 | 449 | PLN02173, PLN02173, UDP-glucosyl transferase famil | 2e-52 | |
| PLN02152 | 455 | PLN02152, PLN02152, indole-3-acetate beta-glucosyl | 4e-50 | |
| PLN03004 | 451 | PLN03004, PLN03004, UDP-glycosyltransferase | 8e-46 | |
| PLN02670 | 472 | PLN02670, PLN02670, transferase, transferring glyc | 3e-45 | |
| PLN02992 | 481 | PLN02992, PLN02992, coniferyl-alcohol glucosyltran | 3e-45 | |
| PLN02167 | 475 | PLN02167, PLN02167, UDP-glycosyltransferase family | 1e-44 | |
| PLN02554 | 481 | PLN02554, PLN02554, UDP-glycosyltransferase family | 8e-44 | |
| PLN00164 | 480 | PLN00164, PLN00164, glucosyltransferase; Provision | 3e-43 | |
| PLN02207 | 468 | PLN02207, PLN02207, UDP-glycosyltransferase | 2e-38 | |
| PLN03015 | 470 | PLN03015, PLN03015, UDP-glucosyl transferase | 1e-36 | |
| PLN00414 | 446 | PLN00414, PLN00414, glycosyltransferase family pro | 3e-34 | |
| PLN02764 | 453 | PLN02764, PLN02764, glycosyltransferase family pro | 1e-33 | |
| PLN02208 | 442 | PLN02208, PLN02208, glycosyltransferase family pro | 2e-29 | |
| COG1819 | 406 | COG1819, COG1819, Glycosyl transferases, related t | 2e-23 | |
| cd03784 | 401 | cd03784, GT1_Gtf_like, This family includes the Gt | 7e-22 | |
| pfam00201 | 500 | pfam00201, UDPGT, UDP-glucoronosyl and UDP-glucosy | 7e-20 | |
| PHA03392 | 507 | PHA03392, egt, ecdysteroid UDP-glucosyltransferase | 6e-12 | |
| TIGR01426 | 392 | TIGR01426, MGT, glycosyltransferase, MGT family | 3e-10 | |
| PLN02555 | 480 | PLN02555, PLN02555, limonoid glucosyltransferase | 6e-08 |
| >gnl|CDD|215305 PLN02562, PLN02562, UDP-glycosyltransferase | Back alignment and domain information |
|---|
Score = 272 bits (697), Expect = 8e-87
Identities = 145/443 (32%), Positives = 239/443 (53%), Gaps = 29/443 (6%)
Query: 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQI 60
RP+++++P PAQGHV P+L+ + GF + ++ H+R+ +L K I
Sbjct: 4 TQRPKIILVPYPAQGHVTPMLKLASAFLSRGFEPVVITPEFIHRRISATLDPK----LGI 59
Query: 61 HLVSIPDGMEPWEDRNDLGKLIEKCLQ-VMPGKLEELIEEINSREDEKIDCFIADGNIGW 119
+SI DG + R+ IE ++ MP +LE L+ +++ ED ++ C + D W
Sbjct: 60 TFMSISDGQDDDPPRDFFS--IENSMENTMPPQLERLLHKLD--EDGEVACMVVDLLASW 115
Query: 120 SMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSHGTPMSMQMFRIAPKMPEMN 179
++ +A + V A FWP A+ L+ IP+L+ G+I G P ++ + P+ P ++
Sbjct: 116 AIGVADRCGVPVAGFWPVMLAAYRLIQAIPELVRTGLISETGCPRQLEKICVLPEQPLLS 175
Query: 180 SRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTF--------- 230
+ D W IG ++K F R ++ + NS + E +
Sbjct: 176 TEDLPWL-IGTPKARKARFKFWTRTLERTKSLRWILMNSFKDEEYDDVKNHQASYNNGQN 234
Query: 231 PELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSF-TILDQVQFQE 289
P++L IGPL T FW ED +CL WL +Q+P+SV+Y+SFGS+ + + + +
Sbjct: 235 PQILQIGPLHNQEATTITKPSFWEEDMSCLGWLQEQKPNSVIYISFGSWVSPIGESNVRT 294
Query: 290 LALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACF 349
LAL LE RPF+WV+ P + P G+ ERV+ +G+++SWAPQL VL H ++ C+
Sbjct: 295 LALALEASGRPFIWVLNPV----WREGLPPGYVERVSKQGKVVSWAPQLEVLKHQAVGCY 350
Query: 350 LSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKN 409
L+HCGWNSTME + LC+P GDQF+N YI D WK+G++ G ++E++
Sbjct: 351 LTHCGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRIS-GFG----QKEVEE 405
Query: 410 KVDQVLGNQDFKARALELKEKAM 432
+ +V+ + R ++L+E+AM
Sbjct: 406 GLRKVMEDSGMGERLMKLRERAM 428
|
Length = 448 |
| >gnl|CDD|178032 PLN02410, PLN02410, UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Score = 219 bits (558), Expect = 3e-66
Identities = 128/468 (27%), Positives = 246/468 (52%), Gaps = 38/468 (8%)
Query: 2 SRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIH 61
+R RV+++P PAQGH+ P+++ ++ L GF +T T +N+ +
Sbjct: 6 ARRRVVLVPVPAQGHISPMMQLAKTLHLKGFSITIAQTKFNYFSPSDDFT-------DFQ 58
Query: 62 LVSIPDGMEPWEDRNDLG------KLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADG 115
V+IP+ + P D +LG KL ++C QV ++ + ++ ++ +I C + D
Sbjct: 59 FVTIPESL-PESDFKNLGPIEFLHKLNKEC-QV---SFKDCLGQLVLQQGNEIACVVYDE 113
Query: 116 NIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSHGTPMSMQMFRIAPKM 175
+ ++ AK+ + +F +SA + KL + ++ P Q + P+
Sbjct: 114 FMYFAEAAAKEFKLPNVIFSTTSATAFVCRSVFDKLYANNVLAPLKEPKGQQN-ELVPEF 172
Query: 176 PEMNSRDCFWAHIGDWTS-QKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTFPELL 234
+ +D +H S +++ + +++ T + + +N C LES + + + L
Sbjct: 173 HPLRCKDFPVSHWASLESIMELYRNTVDKRTASSVIINTASC-----LESSSLSRLQQQL 227
Query: 235 -----PIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQE 289
PIGPL + + + E+ +C++WL++Q+ +SV++VS GS +++ + E
Sbjct: 228 QIPVYPIGPL---HLVASAPTSLLEENKSCIEWLNKQKKNSVIFVSLGSLALMEINEVME 284
Query: 290 LALGLELCKRPFLWVVRPDITTDAN--DRYPEGFQERVAARGQMISWAPQLRVLNHPSIA 347
A GL+ + FLWV+RP + + P+ F + ++ RG ++ WAPQ VL+HP++
Sbjct: 285 TASGLDSSNQQFLWVIRPGSVRGSEWIESLPKEFSKIISGRGYIVKWAPQKEVLSHPAVG 344
Query: 348 CFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRD-EGGIITREE 406
F SHCGWNST+E + G+P +C P+ DQ +N RY+ WK+G++ + D + G + R
Sbjct: 345 GFWSHCGWNSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVEGDLDRGAVERAV 404
Query: 407 IKNKVDQVLGNQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVKT 454
+ V++ ++ + RA+ LKE+ +SV GGSS+ + + F+ +++T
Sbjct: 405 KRLMVEE--EGEEMRKRAISLKEQLRASVISGGSSHNSLEEFVHFMRT 450
|
Length = 451 |
| >gnl|CDD|215247 PLN02448, PLN02448, UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Score = 216 bits (553), Expect = 3e-65
Identities = 132/470 (28%), Positives = 206/470 (43%), Gaps = 56/470 (11%)
Query: 6 VLVMPAPAQGHVIPLLEFSQCLA--KHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLV 63
V+ MP P +GH+ P++ + LA K +TFV T+ L G + + I
Sbjct: 13 VVAMPYPGRGHINPMMNLCKLLASRKPDILITFVVTEEWL-----GLIGSDPKPDNIRFA 67
Query: 64 SIPDGMEPWEDR-NDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSME 122
+IP+ + R D +E + M E+L++ + + +AD + W++
Sbjct: 68 TIPNVIPSELVRAADFPGFLEAVMTKMEAPFEQLLDRLEPP----VTAIVADTYLFWAVG 123
Query: 123 IAKKMNVRGAVFWPSSAA--SVALVFRIPKLIDDGIIDSHGTPMSMQMFRIAPKMPEMNS 180
+ + N+ A W SA SV F + ++ S +P ++S
Sbjct: 124 VGNRRNIPVASLWTMSATFFSVFYHFDLLPQNGHFPVEL-----SESGEERVDYIPGLSS 178
Query: 181 RDCFWAHIGDWTSQKIFFD----LLERNTRAMIAVNFHFC---NSTYELESEAFTTFPEL 233
+ D IF +L+R A V S YELE++A
Sbjct: 179 -----TRLSDL--PPIFHGNSRRVLKRILEAFSWVPKAQYLLFTSFYELEAQAIDALKSK 231
Query: 234 LP-----IGPLLASNRLGNTAGYFWCEDS--NCLKWLDQQQPSSVVYVSFGSFTILDQVQ 286
P IGP + L + + ED+ + +WLD Q SV+YVS GSF + Q
Sbjct: 232 FPFPVYPIGPSIPYMELKDNSSSSNNEDNEPDYFQWLDSQPEGSVLYVSLGSFLSVSSAQ 291
Query: 287 FQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSI 346
E+A GL FLWV R + + +E G ++ W QL+VL H S+
Sbjct: 292 MDEIAAGLRDSGVRFLWVARGEASR---------LKEICGDMGLVVPWCDQLKVLCHSSV 342
Query: 347 ACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEG--GIITR 404
F +HCGWNST+E V G+P L +P F DQ LN + I + WK+G + R+ G ++ R
Sbjct: 343 GGFWTHCGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKREVGEETLVGR 402
Query: 405 EEIKNKVDQ--VLGNQDFKA---RALELKEKAMSSVREGGSSYKTFQNFL 449
EEI V + L +++ K RA EL+E ++ +GGSS F+
Sbjct: 403 EEIAELVKRFMDLESEEGKEMRRRAKELQEICRGAIAKGGSSDTNLDAFI 452
|
Length = 459 |
| >gnl|CDD|178584 PLN03007, PLN03007, UDP-glucosyltransferase family protein | Back alignment and domain information |
|---|
Score = 215 bits (549), Expect = 1e-64
Identities = 140/504 (27%), Positives = 228/504 (45%), Gaps = 86/504 (17%)
Query: 2 SRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHK---RVVESLQGKN---Y 55
+ +L P A GH+IP L+ ++ + G + T + T N K + +E+ + N
Sbjct: 4 EKLHILFFPFMAHGHMIPTLDMAKLFSSRGAKSTILTTPLNAKIFEKPIEAFKNLNPGLE 63
Query: 56 LGEQIH-----LVSIPDGME--------PWEDRNDLGKLIEKCLQVMPGKLEELIEEINS 102
+ QI + +P+G E +D DL + +LE+L+E
Sbjct: 64 IDIQIFNFPCVELGLPEGCENVDFITSNNNDDSGDLFLKFLFSTKYFKDQLEKLLETT-- 121
Query: 103 REDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSHGT 162
+ DC +AD W+ E A+K V VF + S+ + I + S
Sbjct: 122 ----RPDCLVADMFFPWATEAAEKFGVPRLVFHGTGYFSLCASYCIRVHKPQKKVASSSE 177
Query: 163 PMSMQMFRIAPKMP--------EMNSRD------CFWAHIGDWTSQKIFFDLLERNTRAM 208
P + P +P ++N D F + + E + +
Sbjct: 178 PF------VIPDLPGDIVITEEQINDADEESPMGKFMKEVRE----------SEVKSFGV 221
Query: 209 IAVNFHFCNSTYELESEAFTTFPELLP-----IGPLLASNR-------LGNTAGYFWCED 256
+ NS YELES + + IGPL NR G A ++
Sbjct: 222 LV------NSFYELESAYADFYKSFVAKRAWHIGPLSLYNRGFEEKAERGKKAN---IDE 272
Query: 257 SNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDR 316
CLKWLD ++P SV+Y+SFGS Q E+A GLE + F+WVVR + +
Sbjct: 273 QECLKWLDSKKPDSVIYLSFGSVASFKNEQLFEIAAGLEGSGQNFIWVVRKNENQGEKEE 332
Query: 317 Y-PEGFQERVAARGQMI-SWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYF 374
+ PEGF+ER +G +I WAPQ+ +L+H + F++HCGWNS +EGV+ G+P + WP
Sbjct: 333 WLPEGFEERTKGKGLIIRGWAPQVLILDHQATGGFVTHCGWNSLLEGVAAGLPMVTWPVG 392
Query: 375 GDQFLNERYICDFWKVGL-----KFDRDEGGIITREEIKNKVDQVLGNQDF---KARALE 426
+QF NE+ + + G+ K + +G I+RE+++ V +V+ ++ + RA +
Sbjct: 393 AEQFYNEKLVTQVLRTGVSVGAKKLVKVKGDFISREKVEKAVREVIVGEEAEERRLRAKK 452
Query: 427 LKEKAMSSVREGGSSYKTFQNFLQ 450
L E A ++V EGGSS+ F++
Sbjct: 453 LAEMAKAAVEEGGSSFNDLNKFME 476
|
Length = 482 |
| >gnl|CDD|178170 PLN02555, PLN02555, limonoid glucosyltransferase | Back alignment and domain information |
|---|
Score = 206 bits (526), Expect = 4e-61
Identities = 100/260 (38%), Positives = 150/260 (57%), Gaps = 17/260 (6%)
Query: 212 NFH--FC---NSTYELESEAFTTFPELLPI---GPLLASNRLGNTA--GYFWCEDSNCLK 261
N FC ++ ELE E +L PI GPL + N+ G +C++
Sbjct: 210 NLDKPFCILIDTFQELEKEIIDYMSKLCPIKPVGPLFKMAKTPNSDVKGDISKPADDCIE 269
Query: 262 WLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRY--PE 319
WLD + PSSVVY+SFG+ L Q Q E+A G+ FLWV+RP + + PE
Sbjct: 270 WLDSKPPSSVVYISFGTVVYLKQEQIDEIAYGVLNSGVSFLWVMRPPHKDSGVEPHVLPE 329
Query: 320 GFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFL 379
F E+ +G+++ W PQ +VL HPS+ACF++HCGWNSTME +S+G+P +C+P +GDQ
Sbjct: 330 EFLEKAGDKGKIVQWCPQEKVLAHPSVACFVTHCGWNSTMEALSSGVPVVCFPQWGDQVT 389
Query: 380 NERYICDFWKVGLKFDRDEG--GIITREEIKNK-VDQVLGNQ--DFKARALELKEKAMSS 434
+ Y+ D +K G++ R E +ITREE+ ++ +G + + K AL+ KE+A ++
Sbjct: 390 DAVYLVDVFKTGVRLCRGEAENKLITREEVAECLLEATVGEKAAELKQNALKWKEEAEAA 449
Query: 435 VREGGSSYKTFQNFLQWVKT 454
V EGGSS + FQ F+ +
Sbjct: 450 VAEGGSSDRNFQEFVDKLVR 469
|
Length = 480 |
| >gnl|CDD|215465 PLN02863, PLN02863, UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Score = 201 bits (512), Expect = 4e-59
Identities = 142/477 (29%), Positives = 221/477 (46%), Gaps = 49/477 (10%)
Query: 6 VLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLV-- 63
VLV P PAQGH+IPLL+ + LA G +T + T N + L K+ E + L
Sbjct: 12 VLVFPFPAQGHMIPLLDLTHRLALRGLTITVLVTPKNLP-FLNPLLSKHPSIETLVLPFP 70
Query: 64 ---SIPDGMEPWEDRNDLGKLIEKCLQVMPGKLEEL----IEEINSREDEKIDCFIADGN 116
SIP G+E +D L +M L EL + S + I+D
Sbjct: 71 SHPSIPSGVENVKD------LPPSGFPLMIHALGELYAPLLSWFRSHPSPPV-AIISDMF 123
Query: 117 IGWSMEIAKKMNVRGAVFWPSSAASVALVFRI----PKLIDDGIIDSHGTPMSMQMFRIA 172
+GW+ +A ++ +R VF PS A ++++++ + P I+ P
Sbjct: 124 LGWTQNLACQLGIRRFVFSPSGAMALSIMYSLWREMPTKIN---------PDDQNEILSF 174
Query: 173 PKMPEMNSRDCFWAHIG----DWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFT 228
K+P N W I + ++ ++ + RA IA NS ELE
Sbjct: 175 SKIP--NCPKYPWWQISSLYRSYVEGDPAWEFIKDSFRANIASWGLVVNSFTELEGIYLE 232
Query: 229 TFPELL------PIGPLL----ASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGS 278
+ L +GP+L + L G + + WLD + VVYV FGS
Sbjct: 233 HLKKELGHDRVWAVGPILPLSGEKSGLMERGGPSSVSVDDVMTWLDTCEDHKVVYVCFGS 292
Query: 279 FTILDQVQFQELALGLELCKRPFLWVVRPDITTDAN-DRYPEGFQERVAARGQMI-SWAP 336
+L + Q + LA GLE F+W V+ + +++ P GF++RVA RG +I WAP
Sbjct: 293 QVVLTKEQMEALASGLEKSGVHFIWCVKEPVNEESDYSNIPSGFEDRVAGRGLVIRGWAP 352
Query: 337 QLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDR 396
Q+ +L+H ++ FL+HCGWNS +EG+ G+P L WP DQF+N + D KV ++
Sbjct: 353 QVAILSHRAVGAFLTHCGWNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCE 412
Query: 397 DEGGIITREEIKNKV-DQVLGNQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWV 452
+ +E+ + V NQ + RA EL+ A+ +++E GSS K F++ V
Sbjct: 413 GADTVPDSDELARVFMESVSENQVERERAKELRRAALDAIKERGSSVKDLDGFVKHV 469
|
Length = 477 |
| >gnl|CDD|215293 PLN02534, PLN02534, UDP-glycosyltransferase | Back alignment and domain information |
|---|
Score = 194 bits (494), Expect = 2e-56
Identities = 139/483 (28%), Positives = 233/483 (48%), Gaps = 59/483 (12%)
Query: 2 SRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIH 61
+ +++P AQGH+IP+++ ++ LA+ G V+ V T N R +++ G I
Sbjct: 7 KQLHFVLIPLMAQGHMIPMIDMARLLAERGVIVSLVTTPQNASRFAKTIDRARESGLPIR 66
Query: 62 LVSIP-----DGMEP-WEDRNDLGK--LIEKCLQVMPGKLEELIEEINSREDEKIDCFIA 113
LV IP G+ E+ + L L+ K + KL++ +E + C I+
Sbjct: 67 LVQIPFPCKEVGLPIGCENLDTLPSRDLLRKFYDAV-DKLQQPLERFLEQAKPPPSCIIS 125
Query: 114 DGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSHGTPMSM----QMF 169
D + W+ + A++ N+ VF S L+ I H +S+ + F
Sbjct: 126 DKCLSWTSKTAQRFNIPRIVFHGMCCFS---------LLSSHNIRLHNAHLSVSSDSEPF 176
Query: 170 RIAPKMPEMNSRDCFWAHI-GDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFT 228
+ P MP+ S + A + G + S D+ + A NS ELE
Sbjct: 177 VV-PGMPQ--SIEITRAQLPGAFVSLPDLDDVRNKMREAESTAFGVVVNSFNELEHGCAE 233
Query: 229 TFPELLP-----IGPLLASNR-------LGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSF 276
+ + + +GP+ N+ GN A +++ CL+WLD +P SV+Y
Sbjct: 234 AYEKAIKKKVWCVGPVSLCNKRNLDKFERGNKAS---IDETQCLEWLDSMKPRSVIYACL 290
Query: 277 GSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRY--PEGFQERVAARGQMIS- 333
GS L Q EL LGLE K+PF+WV++ + + E F+ER+ RG +I
Sbjct: 291 GSLCRLVPSQLIELGLGLEASKKPFIWVIKTGEKHSELEEWLVKENFEERIKGRGLLIKG 350
Query: 334 WAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLK 393
WAPQ+ +L+HP+I FL+HCGWNST+EG+ +G+P + WP F +QFLNE+ I + ++G++
Sbjct: 351 WAPQVLILSHPAIGGFLTHCGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIGVR 410
Query: 394 F---------DRDEGGI-ITREEIKNKVDQVL--GNQDFKAR---ALELKEKAMSSVREG 438
D + G+ + ++E++ V ++ G ++ + R A EL A ++ G
Sbjct: 411 VGVEVPVRWGDEERVGVLVKKDEVEKAVKTLMDDGGEEGERRRRRAQELGVMARKAMELG 470
Query: 439 GSS 441
GSS
Sbjct: 471 GSS 473
|
Length = 491 |
| >gnl|CDD|215127 PLN02210, PLN02210, UDP-glucosyl transferase | Back alignment and domain information |
|---|
Score = 186 bits (473), Expect = 8e-54
Identities = 124/461 (26%), Positives = 221/461 (47%), Gaps = 38/461 (8%)
Query: 6 VLVMPAPAQGHVIPLLEFSQ--CLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLV 63
VL++ QGH+ P+L+ ++ L+ T T+ + ++ +++ + LV
Sbjct: 11 VLMVTLAFQGHINPMLKLAKHLSLSSKNLHFTLATTE-QARDLLSTVEKPRR---PVDLV 66
Query: 64 SIPDGMEPWEDRNDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEI 123
DG+ P +D L++ +V L ++IEE ++ C I+ W +
Sbjct: 67 FFSDGL-PKDDPRAPETLLKSLNKVGAKNLSKIIEE------KRYSCIISSPFTPWVPAV 119
Query: 124 AKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSHGTPMSMQMFRIAPKMPEMNSRDC 183
A N+ A+ W + + ++ +R + + D ++++ P +P + RD
Sbjct: 120 AAAHNIPCAILWIQACGAYSVYYRY-YMKTNSFPDLEDLNQTVEL----PALPLLEVRDL 174
Query: 184 FWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTFPEL---LPIGPLL 240
+ + F +L+ + V + NS YELESE + +L +PIGPL+
Sbjct: 175 PSFMLPSGGAH--FNNLMAEFADCLRYVKWVLVNSFYELESEIIESMADLKPVIPIGPLV 232
Query: 241 ASNRLGNTAGY--------FWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELAL 292
+ LG+ D C++WLD+Q SSVVY+SFGS + Q + +A
Sbjct: 233 SPFLLGDDEEETLDGKNLDMCKSDDCCMEWLDKQARSSVVYISFGSMLESLENQVETIAK 292
Query: 293 GLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSH 352
L+ PFLWV+RP E +E +G ++ W+PQ ++L+H +I+CF++H
Sbjct: 293 ALKNRGVPFLWVIRPKEKAQNVQVLQEMVKE---GQGVVLEWSPQEKILSHMAISCFVTH 349
Query: 353 CGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDE-GGIITREEIKNKV 411
CGWNST+E V G+P + +P + DQ ++ R + D + +G++ D G + EE++ +
Sbjct: 350 CGWNSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAVDGELKVEEVERCI 409
Query: 412 DQVL---GNQDFKARALELKEKAMSSVREGGSSYKTFQNFL 449
+ V D + RA ELK A ++ GGSS + F+
Sbjct: 410 EAVTEGPAAADIRRRAAELKHVARLALAPGGSSARNLDLFI 450
|
Length = 456 |
| >gnl|CDD|177830 PLN02173, PLN02173, UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Score = 182 bits (464), Expect = 2e-52
Identities = 128/471 (27%), Positives = 227/471 (48%), Gaps = 46/471 (9%)
Query: 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHL 62
R VL +P P+QGH+ P+ +F + L GF+ T T + + I +
Sbjct: 5 RGHVLAVPFPSQGHITPIRQFCKRLHSKGFKTTHTLTTFIFNTIHLDPSSP------ISI 58
Query: 63 VSIPDGMEP--WEDRNDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWS 120
+I DG + + + + ++ + ++I + S D I C + D + W+
Sbjct: 59 ATISDGYDQGGFSSAGSVPEYLQNFKTFGSKTVADIIRKHQS-TDNPITCIVYDSFMPWA 117
Query: 121 MEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSHGTPMSMQMFRIAPKMPEMNS 180
+++A++ + A F+ S A V + + I++G S+ + + E+
Sbjct: 118 LDLAREFGLAAAPFFTQSCA-VNYINYL-SYINNG---------SLTLPIKDLPLLELQD 166
Query: 181 RDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYEL---ESEAFTTFPELLPIG 237
F G S +F+++ + +F NS ++L E+E + +L IG
Sbjct: 167 LPTFVTPTG---SHLAYFEMVLQQFTNFDKADFVLVNSFHDLDLHENELLSKVCPVLTIG 223
Query: 238 PLLAS----NRLGNTAGYFWC-----EDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQ 288
P + S ++ + Y E + C WLD++ SVVY++FGS L Q +
Sbjct: 224 PTVPSMYLDQQIKSDNDYDLNLFDLKEAALCTDWLDKRPQGSVVYIAFGSMAKLSSEQME 283
Query: 289 ELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERV-AARGQMISWAPQLRVLNHPSIA 347
E+A + +LWVVR + P GF E V + ++ W+PQL+VL++ +I
Sbjct: 284 EIASAIS--NFSYLWVVR----ASEESKLPPGFLETVDKDKSLVLKWSPQLQVLSNKAIG 337
Query: 348 CFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRD-EGGIITREE 406
CF++HCGWNSTMEG+S G+P + P + DQ +N +YI D WKVG++ + E GI REE
Sbjct: 338 CFMTHCGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKAEKESGIAKREE 397
Query: 407 IKNKVDQVL---GNQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVKT 454
I+ + +V+ +++ K A + ++ A+ S+ EGGS+ F+ ++
Sbjct: 398 IEFSIKEVMEGEKSKEMKENAGKWRDLAVKSLSEGGSTDININTFVSKIQI 448
|
Length = 449 |
| >gnl|CDD|177813 PLN02152, PLN02152, indole-3-acetate beta-glucosyltransferase | Back alignment and domain information |
|---|
Score = 176 bits (448), Expect = 4e-50
Identities = 135/488 (27%), Positives = 224/488 (45%), Gaps = 74/488 (15%)
Query: 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKH-GFRVTFV--------NTDYNHKRVVESLQ 51
M+ P L++ PAQGHV P L F++ L K G RVTF + NH V
Sbjct: 1 MAPPHFLLVTFPAQGHVNPSLRFARRLIKTTGTRVTFATCLSVIHRSMIPNHNNV----- 55
Query: 52 GKNYLGEQIHLVSIPDGMEP-----WEDRNDLGKLIEKCLQVMPGK-LEELIEEINSRED 105
E + ++ DG + +D + +L+ + K L + IE N D
Sbjct: 56 ------ENLSFLTFSDGFDDGVISNTDDVQN--RLVN--FERNGDKALSDFIEA-NLNGD 104
Query: 106 EKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSHGTPMS 165
+ C I W+ ++A++ ++ + W A VF I G +
Sbjct: 105 SPVTCLIYTILPNWAPKVARRFHLPSVLLWIQPA----FVFDIYYNYSTG---------N 151
Query: 166 MQMFRIAPKMPEMNSRD--CFWA----HIGDWTSQKIFFDLLERNTRAMIAVNFHFCNST 219
+F P +P + RD F + + + + L+ + I VN T
Sbjct: 152 NSVFEF-PNLPSLEIRDLPSFLSPSNTNKAAQAVYQELMEFLKEESNPKILVN------T 204
Query: 220 YE-LESEAFTTFP--ELLPIGPLLASNRL-GNTAGYFWCED---SNCLKWLDQQQPSSVV 272
++ LE E T P E++ +GPLL + G+ +G S+ WLD + SSV+
Sbjct: 205 FDSLEPEFLTAIPNIEMVAVGPLLPAEIFTGSESGKDLSVRDQSSSYTLWLDSKTESSVI 264
Query: 273 YVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPE--------GFQER 324
YVSFG+ L + Q +ELA L KRPFLWV+ + +A E GF+
Sbjct: 265 YVSFGTMVELSKKQIEELARALIEGKRPFLWVITDKLNREAKIEGEEETEIEKIAGFRHE 324
Query: 325 VAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYI 384
+ G ++SW Q+ VL H ++ CF++HCGW+S++E + G+P + +P + DQ N + +
Sbjct: 325 LEEVGMIVSWCSQIEVLRHRAVGCFVTHCGWSSSLESLVLGVPVVAFPMWSDQPANAKLL 384
Query: 385 CDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKAR--ALELKEKAMSSVREGGSSY 442
+ WK G++ + G++ R EI+ ++ V+ + + R A + K A+ + EGGSS
Sbjct: 385 EEIWKTGVRVRENSEGLVERGEIRRCLEAVMEEKSVELRESAEKWKRLAIEAGGEGGSSD 444
Query: 443 KTFQNFLQ 450
K + F++
Sbjct: 445 KNVEAFVK 452
|
Length = 455 |
| >gnl|CDD|178581 PLN03004, PLN03004, UDP-glycosyltransferase | Back alignment and domain information |
|---|
Score = 164 bits (417), Expect = 8e-46
Identities = 89/257 (34%), Positives = 134/257 (52%), Gaps = 36/257 (14%)
Query: 198 FDLLERNTRAMIAVNFHFCNSTYELESEAFTTFPELLPIGPLLASNRLGNTAGYFWCEDS 257
FD LE RA+ A+ C F + PIGPL+ + R+ ED
Sbjct: 217 FDALE--NRAIKAITEELC-------------FRNIYPIGPLIVNGRI---------EDR 252
Query: 258 N------CLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVR--PDI 309
N CL WLD Q SVV++ FGS + + Q E+A+GLE + FLWVVR P++
Sbjct: 253 NDNKAVSCLNWLDSQPEKSVVFLCFGSLGLFSKEQVIEIAVGLEKSGQRFLWVVRNPPEL 312
Query: 310 TT---DANDRYPEGFQERVAARGQMI-SWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNG 365
D PEGF R +G ++ SWAPQ+ VLNH ++ F++HCGWNS +E V G
Sbjct: 313 EKTELDLKSLLPEGFLSRTEDKGMVVKSWAPQVPVLNHKAVGGFVTHCGWNSILEAVCAG 372
Query: 366 IPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARAL 425
+P + WP + +Q N I D K+ + + E G ++ E++ +V +++G + R +
Sbjct: 373 VPMVAWPLYAEQRFNRVMIVDEIKIAISMNESETGFVSSTEVEKRVQEIIGECPVRERTM 432
Query: 426 ELKEKAMSSVREGGSSY 442
+K A ++ E GSS+
Sbjct: 433 AMKNAAELALTETGSSH 449
|
Length = 451 |
| >gnl|CDD|178275 PLN02670, PLN02670, transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Score = 163 bits (415), Expect = 3e-45
Identities = 126/423 (29%), Positives = 197/423 (46%), Gaps = 44/423 (10%)
Query: 2 SRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIH 61
V + P A GH+IP L S+ LA+ G +++F++T N R+ + + L I
Sbjct: 5 EVLHVAMFPWLAMGHLIPFLRLSKLLAQKGHKISFISTPRNLHRL-PKIPSQ--LSSSIT 61
Query: 62 LVSIP----DGMEP-WEDRNDL----GKLIEKCLQVMPGKLEELIEEINSREDEKIDCFI 112
LVS P G+ E D+ +L++K ++ L +E K D I
Sbjct: 62 LVSFPLPSVPGLPSSAESSTDVPYTKQQLLKKAFDLLEPPLTTFLET------SKPDWII 115
Query: 113 ADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSHGTPMSMQMFRIA 172
D W IA ++ + A F +AA+++ + L++ G D T + F +
Sbjct: 116 YDYASHWLPSIAAELGISKAFFSLFTAATLSFIGPPSSLMEGG--DLRSTA---EDFTVV 170
Query: 173 PKMPEMNSRDCFWAHIGDWTSQKIFFDL-----LERNTRAMIAVNFHFCNSTYELESEAF 227
P S F H +K D R A+ + S+ E E E F
Sbjct: 171 PPWVPFESNIVFRYHEVTKYVEKTEEDETGPSDSVRFGFAIGGSDVVIIRSSPEFEPEWF 230
Query: 228 TTFPEL-----LPIG---PLLASN-RLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGS 278
+L +PIG P++ + W +WLD+Q+ +SVVYV+ G+
Sbjct: 231 DLLSDLYRKPIIPIGFLPPVIEDDEEDDTIDVKGW---VRIKEWLDKQRVNSVVYVALGT 287
Query: 279 FTILDQVQFQELALGLELCKRPFLWVVR--PDITTDANDRYPEGFQERVAARGQM-ISWA 335
L + + ELALGLE + PF WV+R P T +A + P+GF+ERV RG + + W
Sbjct: 288 EASLRREEVTELALGLEKSETPFFWVLRNEPGTTQNALEMLPDGFEERVKGRGMIHVGWV 347
Query: 336 PQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFD 395
PQ+++L+H S+ FL+HCGWNS +EG+ G + +P +Q LN R + K+GL+
Sbjct: 348 PQVKILSHESVGGFLTHCGWNSVVEGLGFGRVLILFPVLNEQGLNTRLL-HGKKLGLEVP 406
Query: 396 RDE 398
RDE
Sbjct: 407 RDE 409
|
Length = 472 |
| >gnl|CDD|178572 PLN02992, PLN02992, coniferyl-alcohol glucosyltransferase | Back alignment and domain information |
|---|
Score = 163 bits (415), Expect = 3e-45
Identities = 143/505 (28%), Positives = 234/505 (46%), Gaps = 84/505 (16%)
Query: 1 MSRPRVLVMPAPAQGHVIPLLEFSQCL-AKHGFRVT-FV-NTDYNHKRVVESLQGK--NY 55
+++P + +P GHVIP++E + L A HGF VT FV TD S Q K N
Sbjct: 3 ITKPHAAMFSSPGMGHVIPVIELGKRLSANHGFHVTVFVLETD------AASAQSKFLNS 56
Query: 56 LGEQIHLVSIPDGMEPWEDRNDLGKLIEKCLQVMPGKLEELIEEINSREDEK----IDCF 111
G I + PD + D + ++ K +M + L +I + +D F
Sbjct: 57 TGVDIVGLPSPD-ISGLVDPSA--HVVTKIGVIMREAVPTLRSKIAEMHQKPTALIVDLF 113
Query: 112 IADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSHGT---PMSMQM 168
D ++ + + N+ +F S+A + + P L D I + H P++M
Sbjct: 114 GTD-----ALCLGGEFNMLTYIFIASNARFLGVSIYYPTL-DKDIKEEHTVQRKPLAM-- 165
Query: 169 FRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFT 228
P + D A++ + ++ D + R+ A + N+ E+E ++
Sbjct: 166 ----PGCEPVRFEDTLDAYLV--PDEPVYRDFV-RHGLAYPKADGILVNTWEEMEPKSLK 218
Query: 229 TF--PELL---------PIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFG 277
+ P+LL PIGPL + T D L WL++Q SV+Y+SFG
Sbjct: 219 SLQDPKLLGRVARVPVYPIGPLCRPIQSSKT-------DHPVLDWLNKQPNESVLYISFG 271
Query: 278 SFTILDQVQFQELALGLELCKRPFLWVVRPDI---------------TTDANDRY-PEGF 321
S L Q ELA GLE+ ++ F+WVVRP + T D Y PEGF
Sbjct: 272 SGGSLSAKQLTELAWGLEMSQQRFVWVVRPPVDGSACSAYFSANGGETRDNTPEYLPEGF 331
Query: 322 QERVAARGQMI-SWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLN 380
R RG ++ SWAPQ +L H ++ FL+HCGW+ST+E V G+P + WP F +Q +N
Sbjct: 332 VSRTHDRGFVVPSWAPQAEILAHQAVGGFLTHCGWSSTLESVVGGVPMIAWPLFAEQNMN 391
Query: 381 ERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQD---FKARALELKEKA-MS-SV 435
+ D + ++ D D +I+R +I+ V +V+ ++ + + +L++ A MS S+
Sbjct: 392 AALLSDELGIAVRSD-DPKEVISRSKIEALVRKVMVEEEGEEMRRKVKKLRDTAEMSLSI 450
Query: 436 REGGSSYKTF-------QNFLQWVK 453
GG ++++ Q FL+ V+
Sbjct: 451 DGGGVAHESLCRVTKECQRFLERVR 475
|
Length = 481 |
| >gnl|CDD|215112 PLN02167, PLN02167, UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Score = 162 bits (411), Expect = 1e-44
Identities = 84/249 (33%), Positives = 126/249 (50%), Gaps = 19/249 (7%)
Query: 217 NSTYELESEAFTTF-------PELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPS 269
NS ELE AF F P + P+GP+L+ + + ++WLD Q S
Sbjct: 222 NSFTELEPNAFDYFSRLPENYPPVYPVGPILSLKDRTS-PNLDSSDRDRIMRWLDDQPES 280
Query: 270 SVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVR--PDITTDANDRYPEGFQERVAA 327
SVV++ FGS L Q +E+A LEL FLW +R P + PEGF +RV
Sbjct: 281 SVVFLCFGSLGSLPAPQIKEIAQALELVGCRFLWSIRTNPAEYASPYEPLPEGFMDRVMG 340
Query: 328 RGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDF 387
RG + WAPQ+ +L H +I F+SHCGWNS +E + G+P WP + +Q LN +
Sbjct: 341 RGLVCGWAPQVEILAHKAIGGFVSHCGWNSVLESLWFGVPIATWPMYAEQQLNAFTMVK- 399
Query: 388 WKVGLKFD------RDEGGIITREEIKNKVDQVLGNQDFKARAL-ELKEKAMSSVREGGS 440
++GL + G I+ +EI V ++ +D + + E+ E A +V +GGS
Sbjct: 400 -ELGLAVELRLDYVSAYGEIVKADEIAGAVRSLMDGEDVPRKKVKEIAEAARKAVMDGGS 458
Query: 441 SYKTFQNFL 449
S+ + F+
Sbjct: 459 SFVAVKRFI 467
|
Length = 475 |
| >gnl|CDD|215304 PLN02554, PLN02554, UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Score = 160 bits (406), Expect = 8e-44
Identities = 118/483 (24%), Positives = 211/483 (43%), Gaps = 47/483 (9%)
Query: 9 MPAPAQGHVIPLLEFSQCLAKHGFRVTF--------VNTDYNHKRVVESLQGKNYLGEQI 60
+P+P GH+ P +E ++ L R++ D + + SL + +++
Sbjct: 8 IPSPGIGHLRPTVELAKLLVDSDDRLSITVIIIPSRSGDDASSSAYIASLSASS--EDRL 65
Query: 61 HLVSIPDGMEPWEDRNDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWS 120
I G +P + I+ + + +L+++ ++ ++ F+ D
Sbjct: 66 RYEVISAGDQPTTEDPTFQSYIDNQKPKVRDAVAKLVDDSSTPSSPRLAGFVVDMFCTSM 125
Query: 121 MEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSHGTPMSMQMFRIAPKMPEMNS 180
+++A + V +F+ S+A + L + L D+ D S + P +
Sbjct: 126 IDVANEFGVPSYMFYTSNATFLGLQLHVQMLYDEKKYDVSELEDSEVELDV-PSLTRPYP 184
Query: 181 RDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTF-------PEL 233
C + K + L R + N+ ELE +A F P +
Sbjct: 185 VKCL-PSV---LLSKEWLPLFLAQARRFREMKGILVNTVAELEPQALKFFSGSSGDLPPV 240
Query: 234 LPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALG 293
P+GP+L + + + S L+WLD+Q P SVV++ FGS + Q +E+A+
Sbjct: 241 YPVGPVL--HLENSGDDSKDEKQSEILRWLDEQPPKSVVFLCFGSMGGFSEEQAREIAIA 298
Query: 294 LELCKRPFLWVVR---PDIT-------TDANDRYPEGFQERVAARGQMISWAPQLRVLNH 343
LE FLW +R P+I T+ + PEGF +R G++I WAPQ+ VL
Sbjct: 299 LERSGHRFLWSLRRASPNIMKEPPGEFTNLEEILPEGFLDRTKDIGKVIGWAPQVAVLAK 358
Query: 344 PSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICD----------FWKVGLK 393
P+I F++HCGWNS +E + G+P WP + +Q N + + +W+ L
Sbjct: 359 PAIGGFVTHCGWNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRKYWRGDLL 418
Query: 394 FDRDEGGIITREEIKNKVDQVL-GNQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWV 452
E +T EEI+ + ++ + D + R E+ EK ++ +GGSS+ + F+Q V
Sbjct: 419 AGEME--TVTAEEIERGIRCLMEQDSDVRKRVKEMSEKCHVALMDGGSSHTALKKFIQDV 476
Query: 453 KTN 455
N
Sbjct: 477 TKN 479
|
Length = 481 |
| >gnl|CDD|215084 PLN00164, PLN00164, glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 158 bits (402), Expect = 3e-43
Identities = 111/367 (30%), Positives = 169/367 (46%), Gaps = 66/367 (17%)
Query: 121 MEIAKKMNVRGAVFWPSSAASVALVFRIPKLID---------DGIIDSHGTP----MSMQ 167
+++A+++ V V++ S+AA +AL+ R+P L + +G +D G P S+
Sbjct: 124 LDVARELAVPAYVYFTSTAAMLALMLRLPALDEEVAVEFEEMEGAVDVPGLPPVPASSLP 183
Query: 168 MFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAF 227
+ K P + W + R M A N+ ELE
Sbjct: 184 APVMDKKSP-----NYAW--------------FVYHGRRFMEAAGI-IVNTAAELEPGVL 223
Query: 228 TTF-----------PELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSF 276
P + PIGP+++ L T C++WLD Q P+SVV++ F
Sbjct: 224 AAIADGRCTPGRPAPTVYPIGPVIS---LAFTPPAEQPPHE-CVRWLDAQPPASVVFLCF 279
Query: 277 GSFTILDQVQFQELALGLELCKRPFLWVVR---PDIT---TDAN--DRYPEGFQERVAAR 328
GS D Q +E+A GLE FLWV+R + TDA+ + PEGF ER R
Sbjct: 280 GSMGFFDAPQVREIAAGLERSGHRFLWVLRGPPAAGSRHPTDADLDELLPEGFLERTKGR 339
Query: 329 GQMI--SWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLN--ERYI 384
G ++ +WAPQ +L H ++ F++HCGWNS +E + +G+P WP + +Q LN E
Sbjct: 340 G-LVWPTWAPQKEILAHAAVGGFVTHCGWNSVLESLWHGVPMAPWPLYAEQHLNAFELVA 398
Query: 385 CDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDF---KAR--ALELKEKAMSSVREGG 439
V +K DR + E++ V ++G + KAR A E+K +V EGG
Sbjct: 399 DMGVAVAMKVDRKRDNFVEAAELERAVRSLMGGGEEEGRKAREKAAEMKAACRKAVEEGG 458
Query: 440 SSYKTFQ 446
SSY Q
Sbjct: 459 SSYAALQ 465
|
Length = 480 |
| >gnl|CDD|177857 PLN02207, PLN02207, UDP-glycosyltransferase | Back alignment and domain information |
|---|
Score = 145 bits (366), Expect = 2e-38
Identities = 119/493 (24%), Positives = 223/493 (45%), Gaps = 71/493 (14%)
Query: 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHG--FRVTFVNTDYNHKRVVESLQGKNYLGE 58
M ++ +P P GH++P LEF++ L + R+T + + LQG+++L
Sbjct: 1 MRNAELIFIPTPTVGHLVPFLEFARRLIEQDDRIRITIL---------LMKLQGQSHLDT 51
Query: 59 QI----------HLVSIPDGMEPWEDRNDLGK----------LIEKCLQVMPGKLEELIE 98
+ + +P+ E++ LG +IEK + ++ + +++
Sbjct: 52 YVKSIASSQPFVRFIDVPE----LEEKPTLGGTQSVEAYVYDVIEKNIPLVRNIVMDILS 107
Query: 99 EINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIID 158
+ + + K+ F+AD +++AK +++ VF +++ +A++ + D
Sbjct: 108 SL-ALDGVKVKGFVADFFCLPMIDVAKDVSLPFYVFLTTNSGFLAMM--------QYLAD 158
Query: 159 SHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHF--- 215
H S+ EM S F + F +E A + + F
Sbjct: 159 RHSKDTSV----FVRNSEEMLSIPGFVNPVPANVLPSALF--VEDGYDAYVKLAILFTKA 212
Query: 216 ----CNSTYELESEAFTTF------PELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQ 265
NS++++E + F P + +GP+ + D +KWLD
Sbjct: 213 NGILVNSSFDIEPYSVNHFLDEQNYPSVYAVGPIFDLKAQPHPEQDLARRDEL-MKWLDD 271
Query: 266 QQPSSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERV 325
Q +SVV++ FGS L +E+A GLELC+ FLW +R + T+ +D PEGF +RV
Sbjct: 272 QPEASVVFLCFGSMGRLRGPLVKEIAHGLELCQYRFLWSLRTEEVTN-DDLLPEGFLDRV 330
Query: 326 AARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYIC 385
+ RG + W+PQ+ +L H ++ F+SHCGWNS +E + G+P + WP + +Q LN +
Sbjct: 331 SGRGMICGWSPQVEILAHKAVGGFVSHCGWNSIVESLWFGVPIVTWPMYAEQQLNAFLMV 390
Query: 386 DFWKVGLKFDRD----EGGIITREEIKNKVDQVLG--NQDFKARALELKEKAMSSVREGG 439
K+ ++ D I+ EI+ + V+ N + R +++ + + + GG
Sbjct: 391 KELKLAVELKLDYRVHSDEIVNANEIETAIRCVMNKDNNVVRKRVMDISQMIQRATKNGG 450
Query: 440 SSYKTFQNFLQWV 452
SS+ + F+ V
Sbjct: 451 SSFAAIEKFIHDV 463
|
Length = 468 |
| >gnl|CDD|178589 PLN03015, PLN03015, UDP-glucosyl transferase | Back alignment and domain information |
|---|
Score = 140 bits (353), Expect = 1e-36
Identities = 121/495 (24%), Positives = 219/495 (44%), Gaps = 73/495 (14%)
Query: 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAK-HGFRVTF--VNTDYNHKRVVESLQGKNYLG 57
M +P L++ +P GH+IP+LE L+ VT V + + E++
Sbjct: 1 MDQPHALLVASPGLGHLIPILELGNRLSSVLNIHVTILAVTSGSSSPTETEAIHAAAART 60
Query: 58 ----EQIHLVSIPDGMEPWEDRNDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIA 113
+I V + + +EP D K++ K ++ M + + ++ + + I F
Sbjct: 61 TCQITEIPSVDVDNLVEP--DATIFTKMVVK-MRAMKPAVRDAVKSMKRKPTVMIVDFFG 117
Query: 114 DGNIGWSMEIAKKMNVRGA-VFWPSSAASVALVFRIPKLIDDGIIDSHGTPMSMQMFRIA 172
M IA + V V+ PS A +A++ +P L D +++ + +
Sbjct: 118 TA----LMSIADDVGVTAKYVYIPSHAWFLAVMVYLPVL--DTVVEGEYVDIKEPL---- 167
Query: 173 PKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFH-------FCNSTYELESE 225
K+P +G + D ++ + + N+ EL+
Sbjct: 168 -KIPGCKP-------VGPKELMETMLDRSDQQYKECVRSGLEVPMSDGVLVNTWEELQGN 219
Query: 226 AFTTFPE-----------LLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYV 274
E + PIGP++ +N + ++ +WLD+Q SVVYV
Sbjct: 220 TLAALREDMELNRVMKVPVYPIGPIVRTNVHVE-------KRNSIFEWLDKQGERSVVYV 272
Query: 275 SFGSFTILDQVQFQELALGLELCKRPFLWVVRPDIT----TDANDR-----YPEGFQERV 325
GS L Q ELA GLEL + F+WV+R + + ++D PEGF +R
Sbjct: 273 CLGSGGTLTFEQTVELAWGLELSGQRFVWVLRRPASYLGASSSDDDQVSASLPEGFLDRT 332
Query: 326 AARGQMIS-WAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYI 384
G +++ WAPQ+ +L+H SI FLSHCGW+S +E ++ G+P + WP + +Q++N +
Sbjct: 333 RGVGLVVTQWAPQVEILSHRSIGGFLSHCGWSSVLESLTKGVPIVAWPLYAEQWMNATLL 392
Query: 385 CDFWKVGLK-FDRDEGGIITREEIKNKVDQVLGNQD-----FKARALELKEKAMSSVREG 438
+ V ++ + +I REE+ + V +++ +D +A+A E++ + + G
Sbjct: 393 TEEIGVAVRTSELPSEKVIGREEVASLVRKIVAEEDEEGQKIRAKAEEVRVSSERAWSHG 452
Query: 439 GSSYKTFQNFLQWVK 453
GSSY + +W K
Sbjct: 453 GSSYNS---LFEWAK 464
|
Length = 470 |
| >gnl|CDD|177807 PLN00414, PLN00414, glycosyltransferase family protein | Back alignment and domain information |
|---|
Score = 133 bits (335), Expect = 3e-34
Identities = 116/415 (27%), Positives = 193/415 (46%), Gaps = 44/415 (10%)
Query: 15 GHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHL--VSIP--DGME 70
GH+IP L + LA+ G RVTF HK+ LQ N + I +++P DG+
Sbjct: 16 GHMIPYLHLANKLAEKGHRVTFFLPKKAHKQ----LQPLNLFPDSIVFEPLTLPPVDGL- 70
Query: 71 PW--EDRNDLGKLIEKCLQVMPGKLEELIE-EINSREDEKIDCFIADGNIGWSMEIAKKM 127
P+ E +DL +K + L + IE ++ + K D D + W E+AK+
Sbjct: 71 PFGAETASDLPNSTKKPIFDAMDLLRDQIEAKVRAL---KPDLIFFD-FVHWVPEMAKEF 126
Query: 128 NVRGAVFWPSSAASVALVFRIPKLIDDGIIDSHGTPMSMQMFRIAPKMPEMNSRDCFWAH 187
++ + SAA VA+V P+ + P + ++A + + N F
Sbjct: 127 GIKSVNYQIISAACVAMVL-APR------AELGFPPPDYPLSKVALRGHDANVCSLF--- 176
Query: 188 IGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTFP-----ELLPIGPLLAS 242
+ F L+ + + V+ C ELE ++L GP+L
Sbjct: 177 ----ANSHELFGLITKGLKNCDVVSIRTC---VELEGNLCDFIERQCQRKVLLTGPMLPE 229
Query: 243 NRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRPFL 302
+ N +G + N WL+ +P SVV+ +FG+ ++ QFQE LG+EL PFL
Sbjct: 230 PQ--NKSGKPLEDRWN--HWLNGFEPGSVVFCAFGTQFFFEKDQFQEFCLGMELTGLPFL 285
Query: 303 -WVVRPDITTDANDRYPEGFQERVAARGQMIS-WAPQLRVLNHPSIACFLSHCGWNSTME 360
V+ P ++ + PEGF+ERV RG + W Q +L+HPS+ CF++HCG+ S E
Sbjct: 286 IAVMPPKGSSTVQEALPEGFEERVKGRGIVWEGWVEQPLILSHPSVGCFVNHCGFGSMWE 345
Query: 361 GVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVL 415
+ + + P DQ L R + + +V +K R++ G ++E +++ V V+
Sbjct: 346 SLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQREDSGWFSKESLRDTVKSVM 400
|
Length = 446 |
| >gnl|CDD|178364 PLN02764, PLN02764, glycosyltransferase family protein | Back alignment and domain information |
|---|
Score = 131 bits (331), Expect = 1e-33
Identities = 117/432 (27%), Positives = 193/432 (44%), Gaps = 50/432 (11%)
Query: 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQI-- 60
+ VL+ P A GH+ P L + LA+ G VTF+ K+ ++ L+ N I
Sbjct: 5 KFHVLMYPWFATGHMTPFLFLANKLAEKGHTVTFLLP----KKALKQLEHLNLFPHNIVF 60
Query: 61 ------HLVSIPDGMEP-WEDRNDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIA 113
H+ +P G E E L+ + + ++E ++ + D
Sbjct: 61 RSVTVPHVDGLPVGTETVSEIPVTSADLLMSAMDLTRDQVEVVVRAVEP------DLIFF 114
Query: 114 DGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGI--IDSHGTPMSMQMFRI 171
D W E+A+ ++ + SA+++A + L+ G + G P S + R
Sbjct: 115 D-FAHWIPEVARDFGLKTVKYVVVSASTIASM-----LVPGGELGVPPPGYPSSKVLLRK 168
Query: 172 APKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTFP 231
N +G +LLER T +++ + + E+E F +
Sbjct: 169 QDAYTMKNLEPTNTIDVGP--------NLLERVTTSLMNSDVIAIRTAREIEGN-FCDYI 219
Query: 232 E------LLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQV 285
E +L GP+ W +KWL +P SVV+ + GS IL++
Sbjct: 220 EKHCRKKVLLTGPVFPEPDKTRELEERW------VKWLSGYEPDSVVFCALGSQVILEKD 273
Query: 286 QFQELALGLELCKRPFLWVVRPDI-TTDANDRYPEGFQERVAARGQMI-SWAPQLRVLNH 343
QFQEL LG+EL PFL V+P ++ + PEGF+ERV RG + W Q +L+H
Sbjct: 274 QFQELCLGMELTGSPFLVAVKPPRGSSTIQEALPEGFEERVKGRGVVWGGWVQQPLILSH 333
Query: 344 PSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIIT 403
PS+ CF+SHCG+ S E + + + P GDQ LN R + D KV ++ R+E G +
Sbjct: 334 PSVGCFVSHCGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREETGWFS 393
Query: 404 REEIKNKVDQVL 415
+E +++ ++ V+
Sbjct: 394 KESLRDAINSVM 405
|
Length = 453 |
| >gnl|CDD|177858 PLN02208, PLN02208, glycosyltransferase family protein | Back alignment and domain information |
|---|
Score = 119 bits (299), Expect = 2e-29
Identities = 113/433 (26%), Positives = 185/433 (42%), Gaps = 65/433 (15%)
Query: 7 LVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQI------ 60
+ P A GH+IP L + LA+ G RVTF+ K+ + L+ N + I
Sbjct: 8 FMFPWFAFGHMIPFLHLANKLAEKGHRVTFLLP----KKAQKQLEHHNLFPDSIVFHPLT 63
Query: 61 --HLVSIPDGMEPWEDRN-DLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNI 117
+ +P G E D + L+ + L + ++E + + R D F
Sbjct: 64 IPPVNGLPAGAETTSDIPISMDNLLSEALDLTRDQVEAAVRAL--RPDLIFFDFAQ---- 117
Query: 118 GWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGI--IDSHGTPMSMQMFRIAPKM 175
W E+AK+ ++ + SA ++A + G + G P S +FR
Sbjct: 118 -WIPEMAKEHMIKSVSYIIVSATTIAHTH-----VPGGKLGVPPPGYPSSKVLFR----- 166
Query: 176 PEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCN-----STYELESEAFTTF 230
D AH + IF+ L I C+ + E+E + F +
Sbjct: 167 ----END---AHA--LATLSIFYKRLYHQ----ITTGLKSCDVIALRTCKEIEGK-FCDY 212
Query: 231 ------PELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQ 284
++L GP+ W +L P SVV+ S GS IL++
Sbjct: 213 ISRQYHKKVLLTGPMFPEPDTSKPLEEQWSH------FLSGFPPKSVVFCSLGSQIILEK 266
Query: 285 VQFQELALGLELCKRPFLWVVRPDI-TTDANDRYPEGFQERVAARGQMIS-WAPQLRVLN 342
QFQEL LG+EL PFL V+P ++ + PEGF+ERV RG + W Q +L+
Sbjct: 267 DQFQELCLGMELTGLPFLIAVKPPRGSSTVQEGLPEGFEERVKGRGVVWGGWVQQPLILD 326
Query: 343 HPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGII 402
HPSI CF++HCG + E + + + P+ DQ L R + + ++V ++ R++ G
Sbjct: 327 HPSIGCFVNHCGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREKTGWF 386
Query: 403 TREEIKNKVDQVL 415
++E + N + V+
Sbjct: 387 SKESLSNAIKSVM 399
|
Length = 442 |
| >gnl|CDD|224732 COG1819, COG1819, Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | Back alignment and domain information |
|---|
Score = 101 bits (254), Expect = 2e-23
Identities = 87/438 (19%), Positives = 144/438 (32%), Gaps = 65/438 (14%)
Query: 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVES--LQGKNYLGEQI 60
R ++L + A GHV P L + L + G V F + K VE+ L Y
Sbjct: 1 RMKILFVVCGAYGHVNPCLALGKELRRRGHEVVFA-STGKFKEFVEAAGLAFVAYPIRDS 59
Query: 61 HLVSIPDGMEPWEDRNDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWS 120
++ DG K + LQ + EL+E RE E + D
Sbjct: 60 -ELATEDGKF------AGVKSFRRLLQQFKKLIRELLE--LLRELEPDL--VVDDARLSL 108
Query: 121 MEIAK--KMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSHGTPMSMQMFRIAPKMPEM 178
A+ + V G P + A + P I + + ++ + P++
Sbjct: 109 GLAARLLGIPVVGINVAPYTPLPAAGLPLPPVGIAGK--------LPIPLYPLPPRLVRP 160
Query: 179 NSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNS---TYELESEAFTTFPELLP 235
W L R F + F L
Sbjct: 161 LIFARSWLPKLVVRRNLGLELGLPNIRR-------LFASGPLLEIAYTDVLFPPGDRLPF 213
Query: 236 IGPLLASNRLGNTAGYF-WCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGL 294
IGP + G + W+ +P +VYVS G T+ + V+ + L
Sbjct: 214 IGPYI---------GPLLGEAANELPYWIPADRP--IVYVSLG--TVGNAVELLAIVL-- 258
Query: 295 ELCKR-PFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHC 353
E VR ++ + V + PQL +L P + H
Sbjct: 259 EALADLD----VRVIVSLGGARDTLVNVPDNVIVAD----YVPQLELL--PRADAVIHHG 308
Query: 354 GWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQ 413
G +T E + G+P + P DQ LN + + G+ +E +T E ++ V++
Sbjct: 309 GAGTTSEALYAGVPLVVIPDGADQPLNAERVEEL-GAGIALPFEE---LTEERLRAAVNE 364
Query: 414 VLGNQDFKARALELKEKA 431
VL + ++ A L E+
Sbjct: 365 VLADDSYRRAAERLAEEF 382
|
Length = 406 |
| >gnl|CDD|99960 cd03784, GT1_Gtf_like, This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Score = 96.7 bits (241), Expect = 7e-22
Identities = 65/442 (14%), Positives = 117/442 (26%), Gaps = 73/442 (16%)
Query: 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNY--LGEQIH 61
RVL+ ++G V PL+ + L G V V + G + +G
Sbjct: 1 MRVLITTIGSRGDVQPLVALAWALRAAGHEVRVATPPEFADLVEAA--GLEFVPVGGDPD 58
Query: 62 LVSIPDGMEPWEDRNDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSM 121
+ G L+ + L + + + D D +AD
Sbjct: 59 ELLASPERNAGLLLLGPGLLLGALRLLRREAEAMLDDLVAAARDWGPDLVVADPLAFAGA 118
Query: 122 EIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSHGTPMSMQMFRIAPKMPEMNSR 181
A+ + + P L + + E
Sbjct: 119 VAAEALGIPAVRLLLGPD--TPTSAFPPPLG--------------RANLRLYALLEAELW 162
Query: 182 DCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTFPELLPIGPLLA 241
+++ L + PEL P +
Sbjct: 163 QDLLGAWLRARRRRLGLPPLSLLDGS---------------------DVPELYGFSPAVL 201
Query: 242 S------NRLGNTAGYFWCEDSN------CLKWLDQQQPSSVVYVSFGSFTILDQVQFQE 289
T F N +L VYV FGS + D
Sbjct: 202 PPPPDWPRFDLVTGYGFRDVPYNGPPPPELWLFLAA--GRPPVYVGFGSMVVRDPEALAR 259
Query: 290 LAL-GLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIAC 348
L + + + + + + +++ + P +L P A
Sbjct: 260 LDVEAVATLGQRAILSLGWGGLGAEDLP----------DNVRVVDFVPHDWLL--PRCAA 307
Query: 349 FLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIK 408
+ H G +T + G+P L P+FGDQ + + G D E +T E +
Sbjct: 308 VVHHGGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAE-LGAGPALDPRE---LTAERLA 363
Query: 409 NKVDQVLGNQDFKARALELKEK 430
+ ++L + RA L +
Sbjct: 364 AALRRLLD-PPSRRRAAALLRR 384
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. Length = 401 |
| >gnl|CDD|201077 pfam00201, UDPGT, UDP-glucoronosyl and UDP-glucosyl transferase | Back alignment and domain information |
|---|
Score = 91.7 bits (228), Expect = 7e-20
Identities = 40/176 (22%), Positives = 67/176 (38%), Gaps = 27/176 (15%)
Query: 259 CLKWLDQQQPS---SVVYVSFGSF-TILDQVQFQELALGLELCKRPFLWVVRPDITTDAN 314
Q S VV S GS + + + + E+A L + LW
Sbjct: 264 QEMEAFVQ-SSGEHGVVVFSLGSMVSNIPEEKANEIASALAQIPQKVLW----------- 311
Query: 315 DRY---PEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCW 371
R+ R R ++ W PQ +L HP F++H G N E + +G+P +
Sbjct: 312 -RFDGTKPSTLGR-NTR--LVKWLPQNDLLGHPKTRAFVTHAGSNGVYEAICHGVPMVGM 367
Query: 372 PYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALEL 427
P FGDQ N +++ +T E++ N + V+ + +K + L
Sbjct: 368 PLFGDQMDNAKHMEAKGAAVTLNV----LTMTSEDLLNALKTVINDPSYKENIMRL 419
|
Length = 500 |
| >gnl|CDD|223071 PHA03392, egt, ecdysteroid UDP-glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 67.3 bits (165), Expect = 6e-12
Identities = 40/174 (22%), Positives = 67/174 (38%), Gaps = 24/174 (13%)
Query: 271 VVYVSFGSFTI----LDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVA 326
VVYVSFGS +I +D Q L + LW ++ V
Sbjct: 298 VVYVSFGS-SIDTNDMDNEFLQMLLRTFKKLPYNVLWKYDGEVEAINLPA-------NVL 349
Query: 327 ARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICD 386
+ W PQ VL H ++ F++ G ST E + +P + P GDQF N +
Sbjct: 350 TQ----KWFPQRAVLKHKNVKAFVTQGGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVE 405
Query: 387 FWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALELK----EKAMSSVR 436
+G D ++ ++ + V+ N ++ EL+ + M+ +
Sbjct: 406 L-GIGRALDTVT---VSAAQLVLAIVDVIENPKYRKNLKELRHLIRHQPMTPLH 455
|
Length = 507 |
| >gnl|CDD|233407 TIGR01426, MGT, glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Score = 61.2 bits (149), Expect = 3e-10
Identities = 32/106 (30%), Positives = 52/106 (49%), Gaps = 10/106 (9%)
Query: 334 WAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLK 393
W PQL +L F++H G NSTME + NG+P + P DQ + R I + +G
Sbjct: 282 WVPQLEILKKADA--FITHGGMNSTMEALFNGVPMVAVPQGADQPMTARRIAEL-GLGRH 338
Query: 394 FDRDEGGIITREEIKNKVDQVLGNQDFKARALELKEKAMSSVREGG 439
+E +T E+++ V VL + + R +++ +RE G
Sbjct: 339 LPPEE---VTAEKLREAVLAVLSDPRYAERLRKMRA----EIREAG 377
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production [Cellular processes, Toxin production and resistance]. Length = 392 |
| >gnl|CDD|178170 PLN02555, PLN02555, limonoid glucosyltransferase | Back alignment and domain information |
|---|
Score = 54.4 bits (131), Expect = 6e-08
Identities = 39/153 (25%), Positives = 71/153 (46%), Gaps = 17/153 (11%)
Query: 2 SRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIH 61
S V+++ P QGHV PLL + LA G VTFV T+ K++ ++ N + + +
Sbjct: 6 SLVHVMLVSFPGQGHVNPLLRLGKLLASKGLLVTFVTTESWGKKMRQA----NKIQDGV- 60
Query: 62 LVSIPDGM-------EPWED----RNDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDC 110
L + DG + W + R DL + + V ++ L++ + + + C
Sbjct: 61 LKPVGDGFIRFEFFEDGWAEDDPRRQDLDLYLPQLELVGKREIPNLVKR-YAEQGRPVSC 119
Query: 111 FIADGNIGWSMEIAKKMNVRGAVFWPSSAASVA 143
I + I W ++A+++ + AV W S A +
Sbjct: 120 LINNPFIPWVCDVAEELGIPSAVLWVQSCACFS 152
|
Length = 480 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 466 | |||
| PLN02562 | 448 | UDP-glycosyltransferase | 100.0 | |
| PLN02152 | 455 | indole-3-acetate beta-glucosyltransferase | 100.0 | |
| PLN02410 | 451 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 100.0 | |
| PLN02207 | 468 | UDP-glycosyltransferase | 100.0 | |
| PLN02555 | 480 | limonoid glucosyltransferase | 100.0 | |
| PLN02173 | 449 | UDP-glucosyl transferase family protein | 100.0 | |
| PLN02210 | 456 | UDP-glucosyl transferase | 100.0 | |
| PLN02554 | 481 | UDP-glycosyltransferase family protein | 100.0 | |
| PLN00164 | 480 | glucosyltransferase; Provisional | 100.0 | |
| PLN02863 | 477 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 100.0 | |
| PLN02992 | 481 | coniferyl-alcohol glucosyltransferase | 100.0 | |
| PLN03004 | 451 | UDP-glycosyltransferase | 100.0 | |
| PLN03015 | 470 | UDP-glucosyl transferase | 100.0 | |
| PLN02167 | 475 | UDP-glycosyltransferase family protein | 100.0 | |
| PLN02448 | 459 | UDP-glycosyltransferase family protein | 100.0 | |
| PLN03007 | 482 | UDP-glucosyltransferase family protein | 100.0 | |
| PLN02670 | 472 | transferase, transferring glycosyl groups | 100.0 | |
| PLN02764 | 453 | glycosyltransferase family protein | 100.0 | |
| PLN02534 | 491 | UDP-glycosyltransferase | 100.0 | |
| PLN02208 | 442 | glycosyltransferase family protein | 100.0 | |
| PLN00414 | 446 | glycosyltransferase family protein | 100.0 | |
| PHA03392 | 507 | egt ecdysteroid UDP-glucosyltransferase; Provision | 100.0 | |
| PF00201 | 500 | UDPGT: UDP-glucoronosyl and UDP-glucosyl transfera | 100.0 | |
| TIGR01426 | 392 | MGT glycosyltransferase, MGT family. This model de | 100.0 | |
| cd03784 | 401 | GT1_Gtf_like This family includes the Gtfs, a grou | 100.0 | |
| KOG1192 | 496 | consensus UDP-glucuronosyl and UDP-glucosyl transf | 100.0 | |
| COG1819 | 406 | Glycosyl transferases, related to UDP-glucuronosyl | 100.0 | |
| PF13528 | 318 | Glyco_trans_1_3: Glycosyl transferase family 1 | 99.95 | |
| PRK12446 | 352 | undecaprenyldiphospho-muramoylpentapeptide beta-N- | 99.94 | |
| TIGR00661 | 321 | MJ1255 conserved hypothetical protein. This model | 99.92 | |
| COG0707 | 357 | MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami | 99.9 | |
| PRK00726 | 357 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.87 | |
| cd03785 | 350 | GT1_MurG MurG is an N-acetylglucosaminyltransferas | 99.84 | |
| COG4671 | 400 | Predicted glycosyl transferase [General function p | 99.84 | |
| TIGR00215 | 385 | lpxB lipid-A-disaccharide synthase. Lipid-A precur | 99.78 | |
| TIGR01133 | 348 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.76 | |
| PRK13609 | 380 | diacylglycerol glucosyltransferase; Provisional | 99.74 | |
| TIGR03590 | 279 | PseG pseudaminic acid biosynthesis-associated prot | 99.72 | |
| PRK13608 | 391 | diacylglycerol glucosyltransferase; Provisional | 99.66 | |
| PRK00025 | 380 | lpxB lipid-A-disaccharide synthase; Reviewed | 99.62 | |
| PLN02605 | 382 | monogalactosyldiacylglycerol synthase | 99.56 | |
| TIGR03492 | 396 | conserved hypothetical protein. This protein famil | 99.52 | |
| PF04101 | 167 | Glyco_tran_28_C: Glycosyltransferase family 28 C-t | 99.51 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to | 99.5 | |
| PLN02871 | 465 | UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | 99.49 | |
| COG3980 | 318 | spsG Spore coat polysaccharide biosynthesis protei | 99.42 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 99.39 | |
| PF03033 | 139 | Glyco_transf_28: Glycosyltransferase family 28 N-t | 99.38 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related | 99.36 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related | 99.36 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related | 99.35 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to | 99.34 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related | 99.33 | |
| PRK05749 | 425 | 3-deoxy-D-manno-octulosonic-acid transferase; Revi | 99.32 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related | 99.31 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely r | 99.31 | |
| TIGR00236 | 365 | wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras | 99.28 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related | 99.26 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related | 99.25 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related | 99.23 | |
| cd03805 | 392 | GT1_ALG2_like This family is most closely related | 99.22 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related | 99.22 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 99.21 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino | 99.19 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to | 99.18 | |
| cd03786 | 363 | GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th | 99.16 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related | 99.11 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the trans | 99.1 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 99.07 | |
| TIGR02472 | 439 | sucr_P_syn_N sucrose-phosphate synthase, putative, | 99.05 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related | 99.04 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related | 99.01 | |
| PRK14089 | 347 | ipid-A-disaccharide synthase; Provisional | 99.01 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related | 99.0 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely relate | 99.0 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltran | 98.99 | |
| PRK09922 | 359 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D | 98.97 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related | 98.97 | |
| PLN02275 | 371 | transferase, transferring glycosyl groups | 98.96 | |
| PRK01021 | 608 | lpxB lipid-A-disaccharide synthase; Reviewed | 98.96 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related | 98.96 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely rela | 98.93 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to | 98.93 | |
| TIGR02470 | 784 | sucr_synth sucrose synthase. This model represents | 98.92 | |
| PF04007 | 335 | DUF354: Protein of unknown function (DUF354); Inte | 98.92 | |
| PLN02846 | 462 | digalactosyldiacylglycerol synthase | 98.91 | |
| COG1519 | 419 | KdtA 3-deoxy-D-manno-octulosonic-acid transferase | 98.89 | |
| cd04951 | 360 | GT1_WbdM_like This family is most closely related | 98.88 | |
| PF02684 | 373 | LpxB: Lipid-A-disaccharide synthetase; InterPro: I | 98.87 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related | 98.86 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylas | 98.86 | |
| TIGR02149 | 388 | glgA_Coryne glycogen synthase, Corynebacterium fam | 98.84 | |
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system ass | 98.84 | |
| PF02350 | 346 | Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; | 98.79 | |
| PRK15427 | 406 | colanic acid biosynthesis glycosyltransferase WcaL | 98.74 | |
| PLN02949 | 463 | transferase, transferring glycosyl groups | 98.72 | |
| TIGR03087 | 397 | stp1 sugar transferase, PEP-CTERM/EpsH1 system ass | 98.71 | |
| TIGR03568 | 365 | NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, | 98.69 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related | 98.63 | |
| COG0381 | 383 | WecB UDP-N-acetylglucosamine 2-epimerase [Cell env | 98.63 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related | 98.6 | |
| KOG3349 | 170 | consensus Predicted glycosyltransferase [General f | 98.57 | |
| cd04950 | 373 | GT1_like_1 Glycosyltransferases catalyze the trans | 98.51 | |
| PLN00142 | 815 | sucrose synthase | 98.51 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 98.49 | |
| PRK00654 | 466 | glgA glycogen synthase; Provisional | 98.45 | |
| PLN02501 | 794 | digalactosyldiacylglycerol synthase | 98.41 | |
| COG0763 | 381 | LpxB Lipid A disaccharide synthetase [Cell envelop | 98.4 | |
| TIGR02095 | 473 | glgA glycogen/starch synthases, ADP-glucose type. | 98.36 | |
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is mo | 98.36 | |
| TIGR02918 | 500 | accessory Sec system glycosylation protein GtfA. M | 98.22 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related | 98.22 | |
| COG5017 | 161 | Uncharacterized conserved protein [Function unknow | 98.22 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to | 98.2 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related | 98.09 | |
| PLN02316 | 1036 | synthase/transferase | 98.03 | |
| PRK14099 | 485 | glycogen synthase; Provisional | 97.98 | |
| PRK10125 | 405 | putative glycosyl transferase; Provisional | 97.93 | |
| PF00534 | 172 | Glycos_transf_1: Glycosyl transferases group 1; In | 97.91 | |
| PRK15484 | 380 | lipopolysaccharide 1,2-N-acetylglucosaminetransfer | 97.9 | |
| PF13844 | 468 | Glyco_transf_41: Glycosyl transferase family 41; P | 97.89 | |
| PRK15490 | 578 | Vi polysaccharide biosynthesis protein TviE; Provi | 97.81 | |
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases | 97.74 | |
| PRK10017 | 426 | colanic acid biosynthesis protein; Provisional | 97.67 | |
| TIGR02193 | 319 | heptsyl_trn_I lipopolysaccharide heptosyltransfera | 97.65 | |
| PF13692 | 135 | Glyco_trans_1_4: Glycosyl transferases group 1; PD | 97.21 | |
| PRK09814 | 333 | beta-1,6-galactofuranosyltransferase; Provisional | 97.02 | |
| PF13477 | 139 | Glyco_trans_4_2: Glycosyl transferase 4-like | 97.02 | |
| cd03789 | 279 | GT1_LPS_heptosyltransferase Lipopolysaccharide hep | 96.87 | |
| PRK10422 | 352 | lipopolysaccharide core biosynthesis protein; Prov | 96.8 | |
| TIGR02201 | 344 | heptsyl_trn_III lipopolysaccharide heptosyltransfe | 96.77 | |
| PRK10916 | 348 | ADP-heptose:LPS heptosyltransferase II; Provisiona | 96.76 | |
| COG3914 | 620 | Spy Predicted O-linked N-acetylglucosamine transfe | 96.74 | |
| COG0859 | 334 | RfaF ADP-heptose:LPS heptosyltransferase [Cell env | 96.63 | |
| PRK10964 | 322 | ADP-heptose:LPS heptosyl transferase I; Provisiona | 96.62 | |
| TIGR02195 | 334 | heptsyl_trn_II lipopolysaccharide heptosyltransfer | 96.58 | |
| PF06258 | 311 | Mito_fiss_Elm1: Mitochondrial fission ELM1; InterP | 96.53 | |
| PF06722 | 97 | DUF1205: Protein of unknown function (DUF1205); In | 96.45 | |
| PHA01633 | 335 | putative glycosyl transferase group 1 | 96.3 | |
| PHA01630 | 331 | putative group 1 glycosyl transferase | 96.18 | |
| PF13524 | 92 | Glyco_trans_1_2: Glycosyl transferases group 1 | 96.14 | |
| PF13579 | 160 | Glyco_trans_4_4: Glycosyl transferase 4-like domai | 95.97 | |
| COG1817 | 346 | Uncharacterized protein conserved in archaea [Func | 95.9 | |
| PRK14098 | 489 | glycogen synthase; Provisional | 95.8 | |
| KOG0853 | 495 | consensus Glycosyltransferase [Cell wall/membrane/ | 95.71 | |
| PRK02261 | 137 | methylaspartate mutase subunit S; Provisional | 95.14 | |
| PF12000 | 171 | Glyco_trans_4_3: Gkycosyl transferase family 4 gro | 95.08 | |
| KOG4626 | 966 | consensus O-linked N-acetylglucosamine transferase | 95.06 | |
| TIGR02919 | 438 | accessory Sec system glycosyltransferase GtfB. Mem | 94.4 | |
| PF08660 | 170 | Alg14: Oligosaccharide biosynthesis protein Alg14 | 94.36 | |
| KOG2941 | 444 | consensus Beta-1,4-mannosyltransferase [Posttransl | 94.09 | |
| COG3660 | 329 | Predicted nucleoside-diphosphate-sugar epimerase [ | 93.84 | |
| PF01975 | 196 | SurE: Survival protein SurE; InterPro: IPR002828 T | 93.7 | |
| TIGR03713 | 519 | acc_sec_asp1 accessory Sec system protein Asp1. Th | 93.58 | |
| PF13439 | 177 | Glyco_transf_4: Glycosyltransferase Family 4; PDB: | 93.41 | |
| PF07429 | 360 | Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc | 92.64 | |
| COG4370 | 412 | Uncharacterized protein conserved in bacteria [Fun | 92.23 | |
| PRK13932 | 257 | stationary phase survival protein SurE; Provisiona | 92.16 | |
| PRK02797 | 322 | 4-alpha-L-fucosyltransferase; Provisional | 91.97 | |
| PF02374 | 305 | ArsA_ATPase: Anion-transporting ATPase; PDB: 2WOO_ | 91.9 | |
| cd02067 | 119 | B12-binding B12 binding domain (B12-BD). This doma | 91.86 | |
| PRK05986 | 191 | cob(I)alamin adenolsyltransferase/cobinamide ATP-d | 91.79 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 91.38 | |
| TIGR00087 | 244 | surE 5'/3'-nucleotidase SurE. E. coli SurE is Reco | 91.29 | |
| COG0438 | 381 | RfaG Glycosyltransferase [Cell envelope biogenesis | 90.68 | |
| cd00561 | 159 | CobA_CobO_BtuR ATP:corrinoid adenosyltransferase B | 89.66 | |
| COG0003 | 322 | ArsA Predicted ATPase involved in chromosome parti | 89.44 | |
| TIGR02400 | 456 | trehalose_OtsA alpha,alpha-trehalose-phosphate syn | 88.98 | |
| COG0496 | 252 | SurE Predicted acid phosphatase [General function | 88.92 | |
| COG2894 | 272 | MinD Septum formation inhibitor-activating ATPase | 88.07 | |
| COG1484 | 254 | DnaC DNA replication protein [DNA replication, rec | 88.01 | |
| cd02070 | 201 | corrinoid_protein_B12-BD B12 binding domain of cor | 87.08 | |
| PRK13935 | 253 | stationary phase survival protein SurE; Provisiona | 86.55 | |
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 86.49 | |
| COG1618 | 179 | Predicted nucleotide kinase [Nucleotide transport | 86.09 | |
| PF00731 | 150 | AIRC: AIR carboxylase; InterPro: IPR000031 Phospho | 85.89 | |
| PRK01077 | 451 | cobyrinic acid a,c-diamide synthase; Validated | 85.64 | |
| TIGR00708 | 173 | cobA cob(I)alamin adenosyltransferase. Alternate n | 85.3 | |
| TIGR02370 | 197 | pyl_corrinoid methyltransferase cognate corrinoid | 85.24 | |
| PRK01175 | 261 | phosphoribosylformylglycinamidine synthase I; Prov | 85.1 | |
| PRK13933 | 253 | stationary phase survival protein SurE; Provisiona | 84.29 | |
| PF02310 | 121 | B12-binding: B12 binding domain; InterPro: IPR0061 | 83.63 | |
| cd03793 | 590 | GT1_Glycogen_synthase_GSY2_like Glycogen synthase, | 83.62 | |
| cd00550 | 254 | ArsA_ATPase Oxyanion-translocating ATPase (ArsA). | 83.61 | |
| PF05159 | 269 | Capsule_synth: Capsule polysaccharide biosynthesis | 83.61 | |
| TIGR01007 | 204 | eps_fam capsular exopolysaccharide family. This mo | 83.2 | |
| PRK08305 | 196 | spoVFB dipicolinate synthase subunit B; Reviewed | 82.61 | |
| PF07015 | 231 | VirC1: VirC1 protein; InterPro: IPR009744 This fam | 82.57 | |
| PRK12342 | 254 | hypothetical protein; Provisional | 81.86 | |
| PRK06849 | 389 | hypothetical protein; Provisional | 81.77 | |
| COG2185 | 143 | Sbm Methylmalonyl-CoA mutase, C-terminal domain/su | 81.74 | |
| PF04413 | 186 | Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid | 81.36 | |
| PF02441 | 129 | Flavoprotein: Flavoprotein; InterPro: IPR003382 Th | 81.19 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 80.8 | |
| PF06925 | 169 | MGDG_synth: Monogalactosyldiacylglycerol (MGDG) sy | 80.6 | |
| PRK00346 | 250 | surE 5'(3')-nucleotidase/polyphosphatase; Provisio | 80.52 |
| >PLN02562 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-66 Score=506.32 Aligned_cols=432 Identities=32% Similarity=0.655 Sum_probs=340.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCccHHHHHH
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKLIE 83 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (466)
.||+++|++++||++||+.||+.|+.+|++|||+++..+...+..... ...+++++.+|++.+... ..+...+..
T Consensus 7 ~HVVlvPfPaqGHi~PmL~LAk~Las~G~~VT~vtt~~~~~~~~~~~~----~~~~i~~v~lp~g~~~~~-~~~~~~l~~ 81 (448)
T PLN02562 7 PKIILVPYPAQGHVTPMLKLASAFLSRGFEPVVITPEFIHRRISATLD----PKLGITFMSISDGQDDDP-PRDFFSIEN 81 (448)
T ss_pred cEEEEEcCccccCHHHHHHHHHHHHhCCCEEEEEeCcchhhhhhhccC----CCCCEEEEECCCCCCCCc-cccHHHHHH
Confidence 499999999999999999999999999999999999987766544321 113699999998765432 223445555
Q ss_pred HHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEEeccchhHHHHHHhhcccccccCccCCCCCC
Q 012314 84 KCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSHGTP 163 (466)
Q Consensus 84 ~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 163 (466)
.+...+.+.++++++.++.. .+++|||+|.+..|+..+|+++|||++.|+++.+.....+.+++.....+..+..+.+
T Consensus 82 a~~~~~~~~l~~ll~~l~~~--~pv~cvI~D~~~~w~~~vA~~~giP~~~f~~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 159 (448)
T PLN02562 82 SMENTMPPQLERLLHKLDED--GEVACMVVDLLASWAIGVADRCGVPVAGFWPVMLAAYRLIQAIPELVRTGLISETGCP 159 (448)
T ss_pred HHHHhchHHHHHHHHHhcCC--CCcEEEEECCccHhHHHHHHHhCCCEEEEechhHHHHHHHHHHHHHhhcccccccccc
Confidence 66556788899999887531 2459999999999999999999999999999998888877766543322221111111
Q ss_pred CccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHHHh---------hcCCcc
Q 012314 164 MSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFT---------TFPELL 234 (466)
Q Consensus 164 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~~~---------~~p~v~ 234 (466)
........+|+++.++..+++ .++............+.+..+...+++.+++||+.+||+.... ..|+++
T Consensus 160 ~~~~~~~~~Pg~~~l~~~dl~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~~~~~v~ 238 (448)
T PLN02562 160 RQLEKICVLPEQPLLSTEDLP-WLIGTPKARKARFKFWTRTLERTKSLRWILMNSFKDEEYDDVKNHQASYNNGQNPQIL 238 (448)
T ss_pred ccccccccCCCCCCCChhhCc-chhcCCCcchHHHHHHHHHHhccccCCEEEEcChhhhCHHHHHHHHhhhccccCCCEE
Confidence 111223368888888888888 4432222122334555555666778999999999999984322 347899
Q ss_pred eeccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEecccc-ccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCC
Q 012314 235 PIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFT-ILDQVQFQELALGLELCKRPFLWVVRPDITTDA 313 (466)
Q Consensus 235 ~VGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~-~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~ 313 (466)
.|||++............++.+.+|.+|+++++++++|||||||.. ..+.++++.++.+++.++++|||++... .
T Consensus 239 ~iGpl~~~~~~~~~~~~~~~~~~~c~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~l~~~l~~~g~~fiW~~~~~----~ 314 (448)
T PLN02562 239 QIGPLHNQEATTITKPSFWEEDMSCLGWLQEQKPNSVIYISFGSWVSPIGESNVRTLALALEASGRPFIWVLNPV----W 314 (448)
T ss_pred EecCcccccccccCCCccccchHHHHHHHhcCCCCceEEEEecccccCCCHHHHHHHHHHHHHCCCCEEEEEcCC----c
Confidence 9999987542110001113445678899999988899999999975 6789999999999999999999999754 1
Q ss_pred CCCCchhHHHHhcCCceeecccchhhhhcCCCcccceeccCCchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeE
Q 012314 314 NDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLK 393 (466)
Q Consensus 314 ~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~ 393 (466)
.+.++++++++.++|+++++|+||.+||+|+++++|||||||||++||+++|||+|++|+++||+.||+++++.+|+|+.
T Consensus 315 ~~~l~~~~~~~~~~~~~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~ 394 (448)
T PLN02562 315 REGLPPGYVERVSKQGKVVSWAPQLEVLKHQAVGCYLTHCGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVR 394 (448)
T ss_pred hhhCCHHHHHHhccCEEEEecCCHHHHhCCCccceEEecCcchhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeE
Confidence 23578889888899999999999999999999999999999999999999999999999999999999999874699988
Q ss_pred eecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Q 012314 394 FDRDEGGIITREEIKNKVDQVLGNQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVK 453 (466)
Q Consensus 394 l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~ 453 (466)
+ ..++.++|.++|+++|.|++||+||++++++++++ .+||||.+++++||++++
T Consensus 395 ~-----~~~~~~~l~~~v~~~l~~~~~r~~a~~l~~~~~~~-~~gGSS~~nl~~~v~~~~ 448 (448)
T PLN02562 395 I-----SGFGQKEVEEGLRKVMEDSGMGERLMKLRERAMGE-EARLRSMMNFTTLKDELK 448 (448)
T ss_pred e-----CCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhc-CCCCCHHHHHHHHHHHhC
Confidence 8 45799999999999999999999999999999876 567899999999999863
|
|
| >PLN02152 indole-3-acetate beta-glucosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-65 Score=494.20 Aligned_cols=432 Identities=26% Similarity=0.495 Sum_probs=339.9
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHh-CCCEEEEEeCCcch-HHHHHhhhcCCCCCCCeEEEecCCCCCCCC--CCc
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAK-HGFRVTFVNTDYNH-KRVVESLQGKNYLGEQIHLVSIPDGMEPWE--DRN 76 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~-rGh~Vt~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 76 (466)
|++.||+++|++++||++|++.||+.|+. +|+.|||++++.+. ..+... ....++++++.+++++++.. ...
T Consensus 1 ~~~~hvv~~P~p~qGHi~P~l~La~~La~~~G~~vT~v~t~~~~~~~~~~~----~~~~~~i~~~~i~dglp~g~~~~~~ 76 (455)
T PLN02152 1 MAPPHFLLVTFPAQGHVNPSLRFARRLIKTTGTRVTFATCLSVIHRSMIPN----HNNVENLSFLTFSDGFDDGVISNTD 76 (455)
T ss_pred CCCcEEEEecCcccccHHHHHHHHHHHhhCCCcEEEEEeccchhhhhhhcc----CCCCCCEEEEEcCCCCCCccccccc
Confidence 88999999999999999999999999996 79999999998642 111111 01123699999998887652 233
Q ss_pred cHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEEeccchhHHHHHHhhcccccccCc
Q 012314 77 DLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGI 156 (466)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~ 156 (466)
+...++..+.+.+.+.++++++++...+ .+++|||+|.+.+|+..+|+++|||++.|++++++....+++++...
T Consensus 77 ~~~~~~~~~~~~~~~~l~~~l~~l~~~~-~pv~ciV~D~~~~wa~dvA~~lgIP~~~f~t~~a~~~~~~~~~~~~~---- 151 (455)
T PLN02152 77 DVQNRLVNFERNGDKALSDFIEANLNGD-SPVTCLIYTILPNWAPKVARRFHLPSVLLWIQPAFVFDIYYNYSTGN---- 151 (455)
T ss_pred cHHHHHHHHHHhccHHHHHHHHHhhccC-CCceEEEECCccHhHHHHHHHhCCCEEEEECccHHHHHHHHHhhccC----
Confidence 5556677777788899999998865322 45699999999999999999999999999999999888887654210
Q ss_pred cCCCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhc--cccEEEEcChhhccHHHHhhcC--C
Q 012314 157 IDSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMI--AVNFHFCNSTYELESEAFTTFP--E 232 (466)
Q Consensus 157 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~vl~~s~~~le~~~~~~~p--~ 232 (466)
.....+|+++.++..+++ .++............+.+..+... .++.+++||+++||+....... +
T Consensus 152 ----------~~~~~iPglp~l~~~dlp-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~~~ 220 (455)
T PLN02152 152 ----------NSVFEFPNLPSLEIRDLP-SFLSPSNTNKAAQAVYQELMEFLKEESNPKILVNTFDSLEPEFLTAIPNIE 220 (455)
T ss_pred ----------CCeeecCCCCCCchHHCc-hhhcCCCCchhHHHHHHHHHHHhhhccCCEEEEeChHHhhHHHHHhhhcCC
Confidence 012358888888888888 554332223333444444444442 3579999999999987776663 6
Q ss_pred cceeccccCCCC--CCCCCC--CcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhCCCCEEEEEcCC
Q 012314 233 LLPIGPLLASNR--LGNTAG--YFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPD 308 (466)
Q Consensus 233 v~~VGpl~~~~~--~~~~~~--~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~ 308 (466)
++.|||++.... ...... ..+..+.++.+|||+++++++|||||||...++.+++++++.+|+.++.+|||++...
T Consensus 221 v~~VGPL~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flWv~r~~ 300 (455)
T PLN02152 221 MVAVGPLLPAEIFTGSESGKDLSVRDQSSSYTLWLDSKTESSVIYVSFGTMVELSKKQIEELARALIEGKRPFLWVITDK 300 (455)
T ss_pred EEEEcccCccccccccccCccccccccchHHHHHhhCCCCCceEEEEecccccCCHHHHHHHHHHHHHcCCCeEEEEecC
Confidence 999999975321 000000 0112345799999999888999999999999999999999999999999999999753
Q ss_pred CCC-----CC---CCCCchhHHHHhcCCceeecccchhhhhcCCCcccceeccCCchhhhhhhcCcceeecccccchhhh
Q 012314 309 ITT-----DA---NDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLN 380 (466)
Q Consensus 309 ~~~-----~~---~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~~ 380 (466)
... .. ...+++++.++.++|+++++|+||.+||+|+++++|||||||||++||+++|||+|++|+++||+.|
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~f~e~~~~~g~v~~W~PQ~~iL~h~~vg~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~n 380 (455)
T PLN02152 301 LNREAKIEGEEETEIEKIAGFRHELEEVGMIVSWCSQIEVLRHRAVGCFVTHCGWSSSLESLVLGVPVVAFPMWSDQPAN 380 (455)
T ss_pred cccccccccccccccccchhHHHhccCCeEEEeeCCHHHHhCCcccceEEeeCCcccHHHHHHcCCCEEeccccccchHH
Confidence 110 00 0124678888889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Q 012314 381 ERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQ--DFKARALELKEKAMSSVREGGSSYKTFQNFLQWV 452 (466)
Q Consensus 381 a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~--~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~ 452 (466)
|+++++.+|+|+.+..++.+.++.++|+++|+++|+|+ ++|+||+++++++++++++||+|.+++++|++++
T Consensus 381 a~~~~~~~~~G~~~~~~~~~~~~~e~l~~av~~vm~~~~~~~r~~a~~~~~~~~~a~~~ggsS~~nl~~li~~i 454 (455)
T PLN02152 381 AKLLEEIWKTGVRVRENSEGLVERGEIRRCLEAVMEEKSVELRESAEKWKRLAIEAGGEGGSSDKNVEAFVKTL 454 (455)
T ss_pred HHHHHHHhCceEEeecCcCCcCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHh
Confidence 99999856888887543234579999999999999765 5899999999999999999999999999999976
|
|
| >PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-65 Score=496.54 Aligned_cols=432 Identities=26% Similarity=0.524 Sum_probs=338.3
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCC-CCccHHHH
Q 012314 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWE-DRNDLGKL 81 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 81 (466)
+.||+++|++++||++||+.||+.|+.+|+.|||++++.+... .. ....++++..+|+++++.. .......+
T Consensus 7 ~~HVvlvPfpaqGHi~P~l~LAk~La~~G~~VT~v~T~~n~~~---~~----~~~~~i~~~~ip~glp~~~~~~~~~~~~ 79 (451)
T PLN02410 7 RRRVVLVPVPAQGHISPMMQLAKTLHLKGFSITIAQTKFNYFS---PS----DDFTDFQFVTIPESLPESDFKNLGPIEF 79 (451)
T ss_pred CCEEEEECCCccccHHHHHHHHHHHHcCCCEEEEEeCcccccc---cc----cCCCCeEEEeCCCCCCcccccccCHHHH
Confidence 4699999999999999999999999999999999999876421 10 1123699999998887631 22233456
Q ss_pred HHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEEeccchhHHHHHHhhcccccccCc-cCCC
Q 012314 82 IEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGI-IDSH 160 (466)
Q Consensus 82 ~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~-~~~~ 160 (466)
+..+.+.+.+.++++++.+..+.+.+++|||+|.+..|+..+|+++|||++.|+++++..+..+.+++.....+. .+..
T Consensus 80 ~~~~~~~~~~~~~~~L~~l~~~~~~p~~cVI~D~f~~Wa~dvA~~lgIP~v~F~t~~a~~~~~~~~~~~~~~~~~~~~~~ 159 (451)
T PLN02410 80 LHKLNKECQVSFKDCLGQLVLQQGNEIACVVYDEFMYFAEAAAKEFKLPNVIFSTTSATAFVCRSVFDKLYANNVLAPLK 159 (451)
T ss_pred HHHHHHHhHHHHHHHHHHHHhccCCCcEEEEECCcchHHHHHHHHcCCCEEEEEccCHHHHHHHHHHHHHHhccCCCCcc
Confidence 666666778888888887643222567999999999999999999999999999999988877766543332211 0100
Q ss_pred CCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHHHhhc-----CCcce
Q 012314 161 GTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTF-----PELLP 235 (466)
Q Consensus 161 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~~~~~-----p~v~~ 235 (466)
... .+....+|+++.++..+++ ..... .. ......+... ....+++.+++||+++||+...+.. +++++
T Consensus 160 ~~~--~~~~~~iPg~~~~~~~dlp-~~~~~-~~-~~~~~~~~~~-~~~~~~~~vlvNTf~eLE~~~~~~l~~~~~~~v~~ 233 (451)
T PLN02410 160 EPK--GQQNELVPEFHPLRCKDFP-VSHWA-SL-ESIMELYRNT-VDKRTASSVIINTASCLESSSLSRLQQQLQIPVYP 233 (451)
T ss_pred ccc--cCccccCCCCCCCChHHCc-chhcC-Cc-HHHHHHHHHH-hhcccCCEEEEeChHHhhHHHHHHHHhccCCCEEE
Confidence 000 1122358888888877777 32211 11 1222222222 2346889999999999998755543 58999
Q ss_pred eccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCC--C
Q 012314 236 IGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTD--A 313 (466)
Q Consensus 236 VGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~--~ 313 (466)
|||++...... ...+..+.+|.+|+|+++++++|||||||....+.+++.+++.+|+.++.+|+|+++.+...+ .
T Consensus 234 vGpl~~~~~~~---~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gLe~s~~~FlWv~r~~~~~~~~~ 310 (451)
T PLN02410 234 IGPLHLVASAP---TSLLEENKSCIEWLNKQKKNSVIFVSLGSLALMEINEVMETASGLDSSNQQFLWVIRPGSVRGSEW 310 (451)
T ss_pred ecccccccCCC---ccccccchHHHHHHHhCCCCcEEEEEccccccCCHHHHHHHHHHHHhcCCCeEEEEccCcccccch
Confidence 99998643211 011223346889999998889999999999889999999999999999999999998431100 1
Q ss_pred CCCCchhHHHHhcCCceeecccchhhhhcCCCcccceeccCCchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeE
Q 012314 314 NDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLK 393 (466)
Q Consensus 314 ~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~ 393 (466)
...+|++|+++.++|+++++|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||+++++.+|+|+.
T Consensus 311 ~~~lp~~f~er~~~~g~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~ 390 (451)
T PLN02410 311 IESLPKEFSKIISGRGYIVKWAPQKEVLSHPAVGGFWSHCGWNSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQ 390 (451)
T ss_pred hhcCChhHHHhccCCeEEEccCCHHHHhCCCccCeeeecCchhHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEE
Confidence 12479999999999999999999999999999999999999999999999999999999999999999999875699999
Q ss_pred eecCCCCCcCHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Q 012314 394 FDRDEGGIITREEIKNKVDQVLGNQ---DFKARALELKEKAMSSVREGGSSYKTFQNFLQWVKT 454 (466)
Q Consensus 394 l~~~~~~~~~~~~l~~~i~~ll~~~---~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~ 454 (466)
+. ..++.++|+++|+++|.++ +||++|+++++++++++++||+|.+++++||+.+.+
T Consensus 391 ~~----~~~~~~~v~~av~~lm~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~fv~~~~~ 450 (451)
T PLN02410 391 VE----GDLDRGAVERAVKRLMVEEEGEEMRKRAISLKEQLRASVISGGSSHNSLEEFVHFMRT 450 (451)
T ss_pred eC----CcccHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHh
Confidence 95 6789999999999999765 799999999999999999999999999999999875
|
|
| >PLN02207 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-65 Score=493.56 Aligned_cols=444 Identities=23% Similarity=0.432 Sum_probs=335.9
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCC--CEEEEEeCCcch-HHHHHhhhcCCCCCCCeEEEecCCCCCCC--CCC
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHG--FRVTFVNTDYNH-KRVVESLQGKNYLGEQIHLVSIPDGMEPW--EDR 75 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rG--h~Vt~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 75 (466)
|++.||+++|++++||++||+.||+.|+.+| ..|||++++.+. ..+...........++++|+.+|+..... ...
T Consensus 1 ~~~~hvv~~P~p~qGHi~P~l~lA~~La~~gg~~~vT~~~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~~~~~~ 80 (468)
T PLN02207 1 MRNAELIFIPTPTVGHLVPFLEFARRLIEQDDRIRITILLMKLQGQSHLDTYVKSIASSQPFVRFIDVPELEEKPTLGGT 80 (468)
T ss_pred CCCcEEEEeCCcchhhHHHHHHHHHHHHhCCCCeEEEEEEcCCCcchhhHHhhhhccCCCCCeEEEEeCCCCCCCccccc
Confidence 8999999999999999999999999999998 999999998765 22322221111111369999999643211 112
Q ss_pred ccHHHHHHHHHHhccHHH----HHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEEeccchhHHHHHHhhcccc
Q 012314 76 NDLGKLIEKCLQVMPGKL----EELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKL 151 (466)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~----~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~ 151 (466)
.+...++..+.+.+.+.+ .++++....++ .+++|||+|.+.+|+..+|+++|||++.|+++.+.....+.+++..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~pv~cvV~D~~~~w~~~vA~~~gip~~~f~~~~a~~~~~~~~~~~~ 159 (468)
T PLN02207 81 QSVEAYVYDVIEKNIPLVRNIVMDILSSLALDG-VKVKGFVADFFCLPMIDVAKDVSLPFYVFLTTNSGFLAMMQYLADR 159 (468)
T ss_pred cCHHHHHHHHHHhcchhHHHHHHHHHHHhccCC-CCeEEEEECCcchHHHHHHHHhCCCEEEEECccHHHHHHHHHhhhc
Confidence 234444444444554434 44444322111 3359999999999999999999999999999999888887776533
Q ss_pred cccCccCCCCCCCccccccccCCC-CCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHHH---
Q 012314 152 IDDGIIDSHGTPMSMQMFRIAPKM-PEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAF--- 227 (466)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~~--- 227 (466)
.... .....+.. +....+|++ +.+...+++ .++..... ...+.+......+++.+++||+++||++..
T Consensus 160 ~~~~--~~~~~~~~-~~~~~vPgl~~~l~~~dlp-~~~~~~~~----~~~~~~~~~~~~~~~~vlvNtf~~LE~~~~~~~ 231 (468)
T PLN02207 160 HSKD--TSVFVRNS-EEMLSIPGFVNPVPANVLP-SALFVEDG----YDAYVKLAILFTKANGILVNSSFDIEPYSVNHF 231 (468)
T ss_pred cccc--cccCcCCC-CCeEECCCCCCCCChHHCc-chhcCCcc----HHHHHHHHHhcccCCEEEEEchHHHhHHHHHHH
Confidence 2110 00001111 133468998 678888888 44432221 233334445668899999999999998632
Q ss_pred ---hhcCCcceeccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhCCCCEEEE
Q 012314 228 ---TTFPELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWV 304 (466)
Q Consensus 228 ---~~~p~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~ 304 (466)
+..|+++.|||++.......+... ...+++|.+|+++++++++|||||||....+.+++++++.+|+.++++|||+
T Consensus 232 ~~~~~~p~v~~VGPl~~~~~~~~~~~~-~~~~~~~~~WLd~~~~~sVVyvSfGS~~~~~~~q~~ela~~l~~~~~~flW~ 310 (468)
T PLN02207 232 LDEQNYPSVYAVGPIFDLKAQPHPEQD-LARRDELMKWLDDQPEASVVFLCFGSMGRLRGPLVKEIAHGLELCQYRFLWS 310 (468)
T ss_pred HhccCCCcEEEecCCcccccCCCCccc-cchhhHHHHHHhcCCCCcEEEEEeccCcCCCHHHHHHHHHHHHHCCCcEEEE
Confidence 345789999999865421100000 1133579999999988899999999998899999999999999999999999
Q ss_pred EcCCCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCcccceeccCCchhhhhhhcCcceeecccccchhhhHHHH
Q 012314 305 VRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYI 384 (466)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv 384 (466)
++.... ...+.+|++++++.++|+.+++|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||+++
T Consensus 311 ~r~~~~-~~~~~lp~~f~er~~~~g~i~~W~PQ~~IL~H~~vg~FvTH~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~ 389 (468)
T PLN02207 311 LRTEEV-TNDDLLPEGFLDRVSGRGMICGWSPQVEILAHKAVGGFVSHCGWNSIVESLWFGVPIVTWPMYAEQQLNAFLM 389 (468)
T ss_pred EeCCCc-cccccCCHHHHhhcCCCeEEEEeCCHHHHhcccccceeeecCccccHHHHHHcCCCEEecCccccchhhHHHH
Confidence 985311 1123578999998999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHhhhceeEeecC----CCCCcCHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHh
Q 012314 385 CDFWKVGLKFDRD----EGGIITREEIKNKVDQVLG--NQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVKTN 455 (466)
Q Consensus 385 ~~~~G~G~~l~~~----~~~~~~~~~l~~~i~~ll~--~~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~ 455 (466)
++.+|+|+.+..+ +.+.++.++|.++|+++|. +++||+||+++++++++++.+||+|.+++++|++++...
T Consensus 390 ~~~~gvGv~~~~~~~~~~~~~v~~e~i~~av~~vm~~~~~~~r~~a~~l~~~a~~A~~~GGSS~~~l~~~v~~~~~~ 466 (468)
T PLN02207 390 VKELKLAVELKLDYRVHSDEIVNANEIETAIRCVMNKDNNVVRKRVMDISQMIQRATKNGGSSFAAIEKFIHDVIGI 466 (468)
T ss_pred HHHhCceEEEecccccccCCcccHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhc
Confidence 7757999977421 1235699999999999997 679999999999999999999999999999999998764
|
|
| >PLN02555 limonoid glucosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-65 Score=493.80 Aligned_cols=446 Identities=30% Similarity=0.536 Sum_probs=346.9
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhh---hc--CCCCCCCeEEEecCCCCCCCCC-Cc
Q 012314 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESL---QG--KNYLGEQIHLVSIPDGMEPWED-RN 76 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~-~~ 76 (466)
+.||+++|+|++||++||+.||+.|+.+|..|||++++.+...+.+.. .. .......++|..+|++++.... ..
T Consensus 7 ~~HVv~~PfpaqGHi~Pml~lA~~La~~G~~vT~v~T~~~~~~~~~a~~~~~~~~~~~~~~~i~~~~~pdglp~~~~~~~ 86 (480)
T PLN02555 7 LVHVMLVSFPGQGHVNPLLRLGKLLASKGLLVTFVTTESWGKKMRQANKIQDGVLKPVGDGFIRFEFFEDGWAEDDPRRQ 86 (480)
T ss_pred CCEEEEECCcccccHHHHHHHHHHHHhCCCeEEEEeccchhhhhhccccccccccccCCCCeEEEeeCCCCCCCCccccc
Confidence 579999999999999999999999999999999999997766554311 00 0001223777778887765422 33
Q ss_pred cHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEEeccchhHHHHHHhhcccccccCc
Q 012314 77 DLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGI 156 (466)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~ 156 (466)
+...++..+.+.+.+.++++++.+..+. .+++|||+|.+..|+..+|+++|||+++|++++++.+..+.+++.. .
T Consensus 87 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~pv~ciV~D~~~~wa~~vA~~~gIP~~~F~t~~a~~~~~~~~~~~~----~ 161 (480)
T PLN02555 87 DLDLYLPQLELVGKREIPNLVKRYAEQG-RPVSCLINNPFIPWVCDVAEELGIPSAVLWVQSCACFSAYYHYYHG----L 161 (480)
T ss_pred CHHHHHHHHHHhhhHHHHHHHHHHhccC-CCceEEEECCcchHHHHHHHHcCCCeEEeecccHHHHHHHHHHhhc----C
Confidence 4455666666667888999998764322 4459999999999999999999999999999999988888776421 1
Q ss_pred cCCCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHHHhhc---CCc
Q 012314 157 IDSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTF---PEL 233 (466)
Q Consensus 157 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~~~~~---p~v 233 (466)
.+....... +....+|++|.++..+++ .++............+.+..+...+++.+++||+.+||......+ ..+
T Consensus 162 ~~~~~~~~~-~~~~~iPglp~l~~~dlp-~~~~~~~~~~~~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~~~~l~~~~~v 239 (480)
T PLN02555 162 VPFPTETEP-EIDVQLPCMPLLKYDEIP-SFLHPSSPYPFLRRAILGQYKNLDKPFCILIDTFQELEKEIIDYMSKLCPI 239 (480)
T ss_pred CCcccccCC-CceeecCCCCCcCHhhCc-ccccCCCCchHHHHHHHHHHHhcccCCEEEEEchHHHhHHHHHHHhhCCCE
Confidence 110001101 122468999988889988 544322122333444555556677899999999999998765543 138
Q ss_pred ceeccccCCCCCC-CC-CCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCC
Q 012314 234 LPIGPLLASNRLG-NT-AGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITT 311 (466)
Q Consensus 234 ~~VGpl~~~~~~~-~~-~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~ 311 (466)
+.|||++...... .. ....+..+++|.+|++.++++++|||||||....+.+++.+++.+++..+++|||+++.....
T Consensus 240 ~~iGPl~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~~l~~~~~~flW~~~~~~~~ 319 (480)
T PLN02555 240 KPVGPLFKMAKTPNSDVKGDISKPADDCIEWLDSKPPSSVVYISFGTVVYLKQEQIDEIAYGVLNSGVSFLWVMRPPHKD 319 (480)
T ss_pred EEeCcccCccccccccccccccccchhHHHHHhCCCCCceeEEEeccccCCCHHHHHHHHHHHHhcCCeEEEEEecCccc
Confidence 9999997542211 00 011234456799999999888999999999988899999999999999999999998743111
Q ss_pred --CCCCCCchhHHHHhcCCceeecccchhhhhcCCCcccceeccCCchhhhhhhcCcceeecccccchhhhHHHHHHhhh
Q 012314 312 --DANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWK 389 (466)
Q Consensus 312 --~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G 389 (466)
.....+|+++.++.++|+++++|+||.+||.|++|++|||||||||++||+++|||||++|+++||+.||+++++.||
T Consensus 320 ~~~~~~~lp~~~~~~~~~~g~v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~g 399 (480)
T PLN02555 320 SGVEPHVLPEEFLEKAGDKGKIVQWCPQEKVLAHPSVACFVTHCGWNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFK 399 (480)
T ss_pred ccchhhcCChhhhhhcCCceEEEecCCHHHHhCCCccCeEEecCCcchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhC
Confidence 012347888888888999999999999999999999999999999999999999999999999999999999998679
Q ss_pred ceeEeecC--CCCCcCHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHh
Q 012314 390 VGLKFDRD--EGGIITREEIKNKVDQVLGNQ---DFKARALELKEKAMSSVREGGSSYKTFQNFLQWVKTN 455 (466)
Q Consensus 390 ~G~~l~~~--~~~~~~~~~l~~~i~~ll~~~---~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~ 455 (466)
+|+.+... +...++.++|.++|+++|.++ ++|+||++|+++.++++++||+|.+++++||+++...
T Consensus 400 vGv~l~~~~~~~~~v~~~~v~~~v~~vm~~~~g~~~r~ra~~l~~~a~~A~~egGSS~~~l~~~v~~i~~~ 470 (480)
T PLN02555 400 TGVRLCRGEAENKLITREEVAECLLEATVGEKAAELKQNALKWKEEAEAAVAEGGSSDRNFQEFVDKLVRK 470 (480)
T ss_pred ceEEccCCccccCcCcHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhc
Confidence 99999421 124689999999999999653 7999999999999999999999999999999999876
|
|
| >PLN02173 UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-64 Score=487.15 Aligned_cols=423 Identities=28% Similarity=0.564 Sum_probs=333.4
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCC--CCCccHHHH
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPW--EDRNDLGKL 81 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 81 (466)
.||+++|++++||++||+.||+.|+.+|+.|||++++.+...+... ...+++++.+|+++++. +...+...+
T Consensus 6 ~hvv~~P~paqGHi~P~l~lAk~La~~G~~vT~v~t~~~~~~~~~~------~~~~i~~~~ipdglp~~~~~~~~~~~~~ 79 (449)
T PLN02173 6 GHVLAVPFPSQGHITPIRQFCKRLHSKGFKTTHTLTTFIFNTIHLD------PSSPISIATISDGYDQGGFSSAGSVPEY 79 (449)
T ss_pred cEEEEecCcccccHHHHHHHHHHHHcCCCEEEEEECCchhhhcccC------CCCCEEEEEcCCCCCCcccccccCHHHH
Confidence 5999999999999999999999999999999999999875544221 11369999999988763 223345667
Q ss_pred HHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEEeccchhHHHHHHhhcccccccCccCCCC
Q 012314 82 IEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSHG 161 (466)
Q Consensus 82 ~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 161 (466)
+..+.+.+.+.++++++.+..+. .+.||||+|.+.+|+..+|+++|||++.|++++++....+++. . ...+
T Consensus 80 ~~~~~~~~~~~~~~~l~~~~~~~-~Pv~cvV~D~f~~Wa~dVA~elgIP~v~F~~~~a~~~~~~~~~-~-~~~~------ 150 (449)
T PLN02173 80 LQNFKTFGSKTVADIIRKHQSTD-NPITCIVYDSFMPWALDLAREFGLAAAPFFTQSCAVNYINYLS-Y-INNG------ 150 (449)
T ss_pred HHHHHHhhhHHHHHHHHHhhccC-CCceEEEECCcchhHHHHHHHhCCCEEEEechHHHHHHHHHhH-H-hccC------
Confidence 77777778889999998864321 2349999999999999999999999999999888776554331 1 1100
Q ss_pred CCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHHHhhc---CCcceecc
Q 012314 162 TPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTF---PELLPIGP 238 (466)
Q Consensus 162 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~~~~~---p~v~~VGp 238 (466)
.....+|+++.++..+++ .++............+.+..+...+++.+++||+.+||+.....+ ++++.|||
T Consensus 151 -----~~~~~~pg~p~l~~~dlp-~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~v~~VGP 224 (449)
T PLN02173 151 -----SLTLPIKDLPLLELQDLP-TFVTPTGSHLAYFEMVLQQFTNFDKADFVLVNSFHDLDLHENELLSKVCPVLTIGP 224 (449)
T ss_pred -----CccCCCCCCCCCChhhCC-hhhcCCCCchHHHHHHHHHHhhhccCCEEEEeCHHHhhHHHHHHHHhcCCeeEEcc
Confidence 011236788878888887 444322222233444445556678899999999999998755554 46999999
Q ss_pred ccCCCC------CCCC-CCCcc--cCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCC
Q 012314 239 LLASNR------LGNT-AGYFW--CEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDI 309 (466)
Q Consensus 239 l~~~~~------~~~~-~~~~~--~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~ 309 (466)
++.... .... ....+ ..+++|..|++.++++++|||||||....+.+++.+++.++ .+.+|+|++...
T Consensus 225 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~WLd~~~~~svvyvsfGS~~~~~~~~~~ela~gL--s~~~flWvvr~~- 301 (449)
T PLN02173 225 TVPSMYLDQQIKSDNDYDLNLFDLKEAALCTDWLDKRPQGSVVYIAFGSMAKLSSEQMEEIASAI--SNFSYLWVVRAS- 301 (449)
T ss_pred cCchhhccccccccccccccccccccchHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHh--cCCCEEEEEecc-
Confidence 974210 0000 00111 22446999999998899999999999888999999999999 678899999753
Q ss_pred CCCCCCCCchhHHHHh-cCCceeecccchhhhhcCCCcccceeccCCchhhhhhhcCcceeecccccchhhhHHHHHHhh
Q 012314 310 TTDANDRYPEGFQERV-AARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFW 388 (466)
Q Consensus 310 ~~~~~~~~~~~~~~~~-~~n~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~ 388 (466)
....+|++++++. ++|+++++|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||+++++.|
T Consensus 302 ---~~~~lp~~~~~~~~~~~~~i~~W~PQ~~iL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~ 378 (449)
T PLN02173 302 ---EESKLPPGFLETVDKDKSLVLKWSPQLQVLSNKAIGCFMTHCGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVW 378 (449)
T ss_pred ---chhcccchHHHhhcCCceEEeCCCCHHHHhCCCccceEEecCccchHHHHHHcCCCEEecCchhcchHHHHHHHHHh
Confidence 1235788888777 588999999999999999999999999999999999999999999999999999999999867
Q ss_pred hceeEeecCCC-CCcCHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Q 012314 389 KVGLKFDRDEG-GIITREEIKNKVDQVLGNQ---DFKARALELKEKAMSSVREGGSSYKTFQNFLQWVK 453 (466)
Q Consensus 389 G~G~~l~~~~~-~~~~~~~l~~~i~~ll~~~---~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~ 453 (466)
|+|+.+..++. ..++.++|.++|+++|.++ ++|+||++++++.++++++||+|.+++++||+++.
T Consensus 379 g~Gv~v~~~~~~~~~~~e~v~~av~~vm~~~~~~~~r~~a~~~~~~a~~Av~~gGSS~~~l~~~v~~~~ 447 (449)
T PLN02173 379 KVGVRVKAEKESGIAKREEIEFSIKEVMEGEKSKEMKENAGKWRDLAVKSLSEGGSTDININTFVSKIQ 447 (449)
T ss_pred CceEEEeecccCCcccHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHhc
Confidence 99999865221 2479999999999999764 68999999999999999999999999999999874
|
|
| >PLN02210 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-63 Score=485.66 Aligned_cols=429 Identities=28% Similarity=0.504 Sum_probs=330.0
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHH--HHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCccHHH
Q 012314 3 RPRVLVMPAPAQGHVIPLLEFSQC--LAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGK 80 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~la~~--L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (466)
+.||+++|++++||++|++.||++ |++||++|||++++.+...+.... .....+++..+|+++++... .+...
T Consensus 8 ~~hvv~~P~pa~GHi~P~l~La~~L~L~~~G~~VT~v~t~~~~~~~~~~~----~~~~~~~~~~~~~glp~~~~-~~~~~ 82 (456)
T PLN02210 8 ETHVLMVTLAFQGHINPMLKLAKHLSLSSKNLHFTLATTEQARDLLSTVE----KPRRPVDLVFFSDGLPKDDP-RAPET 82 (456)
T ss_pred CCEEEEeCCcccccHHHHHHHHHHHHhhcCCcEEEEEeccchhhhhcccc----CCCCceEEEECCCCCCCCcc-cCHHH
Confidence 569999999999999999999999 569999999999998876553221 12346888888887776532 34445
Q ss_pred HHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEEeccchhHHHHHHhhcccccccCccCCC
Q 012314 81 LIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSH 160 (466)
Q Consensus 81 ~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 160 (466)
++..+.+.+.+.++++++. .++||||+|.+..|+..+|+++|||++.|+++.+..+..+.+++... ...+.
T Consensus 83 ~~~~~~~~~~~~l~~~l~~------~~~~~vI~D~~~~w~~~vA~~lgIP~~~f~~~sa~~~~~~~~~~~~~--~~~~~- 153 (456)
T PLN02210 83 LLKSLNKVGAKNLSKIIEE------KRYSCIISSPFTPWVPAVAAAHNIPCAILWIQACGAYSVYYRYYMKT--NSFPD- 153 (456)
T ss_pred HHHHHHHhhhHHHHHHHhc------CCCcEEEECCcchhHHHHHHHhCCCEEEEecccHHHHHHHHhhhhcc--CCCCc-
Confidence 6666666666667777665 57999999999999999999999999999998888887776643211 11110
Q ss_pred CCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHHHhhc---CCcceec
Q 012314 161 GTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTF---PELLPIG 237 (466)
Q Consensus 161 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~~~~~---p~v~~VG 237 (466)
. ...+....+|+++.+...+++ .++.... ...+...+.+..+....++.+++||+.+||......+ +++++||
T Consensus 154 -~-~~~~~~~~~Pgl~~~~~~dl~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~~~~v~~VG 229 (456)
T PLN02210 154 -L-EDLNQTVELPALPLLEVRDLP-SFMLPSG-GAHFNNLMAEFADCLRYVKWVLVNSFYELESEIIESMADLKPVIPIG 229 (456)
T ss_pred -c-cccCCeeeCCCCCCCChhhCC-hhhhcCC-chHHHHHHHHHHHhcccCCEEEEeCHHHHhHHHHHHHhhcCCEEEEc
Confidence 0 000122457888878888877 4332221 1222233333334456789999999999998766653 5799999
Q ss_pred cccCCC----CCC-CCCC---CcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCC
Q 012314 238 PLLASN----RLG-NTAG---YFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDI 309 (466)
Q Consensus 238 pl~~~~----~~~-~~~~---~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~ 309 (466)
|++... ... ...+ ..+..+.+|.+|++.++++++|||||||....+.+++++++.+++..+++|||+++...
T Consensus 230 Pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~e~a~~l~~~~~~flw~~~~~~ 309 (456)
T PLN02210 230 PLVSPFLLGDDEEETLDGKNLDMCKSDDCCMEWLDKQARSSVVYISFGSMLESLENQVETIAKALKNRGVPFLWVIRPKE 309 (456)
T ss_pred ccCchhhcCcccccccccccccccccchHHHHHHhCCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEeCCc
Confidence 997421 110 0000 11344667899999988889999999999888999999999999999999999997531
Q ss_pred CCCCCCCCchhHHHHh-cCCceeecccchhhhhcCCCcccceeccCCchhhhhhhcCcceeecccccchhhhHHHHHHhh
Q 012314 310 TTDANDRYPEGFQERV-AARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFW 388 (466)
Q Consensus 310 ~~~~~~~~~~~~~~~~-~~n~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~ 388 (466)
....+..+.+.. ++++++++|+||.+||+|+++++|||||||||++||+++|||+|++|+++||+.||+++++.+
T Consensus 310 ----~~~~~~~~~~~~~~~~g~v~~w~PQ~~iL~h~~vg~FitH~G~nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~ 385 (456)
T PLN02210 310 ----KAQNVQVLQEMVKEGQGVVLEWSPQEKILSHMAISCFVTHCGWNSTIETVVAGVPVVAYPSWTDQPIDARLLVDVF 385 (456)
T ss_pred ----cccchhhHHhhccCCCeEEEecCCHHHHhcCcCcCeEEeeCCcccHHHHHHcCCCEEecccccccHHHHHHHHHHh
Confidence 111234455555 478888899999999999999999999999999999999999999999999999999999746
Q ss_pred hceeEeecCC-CCCcCHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Q 012314 389 KVGLKFDRDE-GGIITREEIKNKVDQVLGNQ---DFKARALELKEKAMSSVREGGSSYKTFQNFLQWVK 453 (466)
Q Consensus 389 G~G~~l~~~~-~~~~~~~~l~~~i~~ll~~~---~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~ 453 (466)
|+|+.+..++ ...++.++|+++|+++|.++ ++|+||+++++..+.++++||||.+++++||+++.
T Consensus 386 g~G~~l~~~~~~~~~~~~~l~~av~~~m~~~~g~~~r~~a~~l~~~a~~Av~~gGSS~~~l~~~v~~~~ 454 (456)
T PLN02210 386 GIGVRMRNDAVDGELKVEEVERCIEAVTEGPAAADIRRRAAELKHVARLALAPGGSSARNLDLFISDIT 454 (456)
T ss_pred CeEEEEeccccCCcCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHh
Confidence 9999996421 24689999999999999776 49999999999999999999999999999999875
|
|
| >PLN02554 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-63 Score=490.82 Aligned_cols=441 Identities=25% Similarity=0.446 Sum_probs=329.4
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCC--CEEEEEeCCcchHHHH--H-hhhcCCC-CCCCeEEEecCCCCCCCCCCc
Q 012314 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHG--FRVTFVNTDYNHKRVV--E-SLQGKNY-LGEQIHLVSIPDGMEPWEDRN 76 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~la~~L~~rG--h~Vt~~~~~~~~~~~~--~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 76 (466)
|+||+++|++++||++||+.||+.|+.+| ..|||++++.+...+. . ...+... ...+++++.+|++.+......
T Consensus 2 ~~hvvl~P~paqGHi~P~l~LAk~La~~G~~~~vT~v~t~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~~~~~ 81 (481)
T PLN02554 2 KIELVFIPSPGIGHLRPTVELAKLLVDSDDRLSITVIIIPSRSGDDASSSAYIASLSASSEDRLRYEVISAGDQPTTEDP 81 (481)
T ss_pred ceEEEEeCCcchhhHHHHHHHHHHHHhCCCCEEEEEEeCCCccchhhhhhhhhhhcccCCCCCeEEEEcCCCCCCcccch
Confidence 56899999999999999999999999998 8899999987654221 1 0110000 123599999997654221111
Q ss_pred cHHHHHHHHHHhccHHHHHHHHHHhc----CCCCCccEEEeCCCchhHHHHHHHcCCceEEeccchhHHHHHHhhccccc
Q 012314 77 DLGKLIEKCLQVMPGKLEELIEEINS----REDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLI 152 (466)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~ll~~l~~----~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~ 152 (466)
.... +...+.+.+++.++++.. ..+.+.+|||+|.+..|+..+|+++|||++.|+++.+.....+.+++...
T Consensus 82 ~~~~----~~~~~~~~~~~~l~~l~~~~~~~~~~pv~cvV~D~f~~wa~dvA~~lgIP~~~F~t~sa~~~~~~~~~~~~~ 157 (481)
T PLN02554 82 TFQS----YIDNQKPKVRDAVAKLVDDSSTPSSPRLAGFVVDMFCTSMIDVANEFGVPSYMFYTSNATFLGLQLHVQMLY 157 (481)
T ss_pred HHHH----HHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEECCcchhHHHHHHHhCCCEEEEeCCcHHHHHHHHhhhhhc
Confidence 2222 223344445555554421 11123489999999999999999999999999999999999888876532
Q ss_pred ccCccCCCCCCCccccccccCCCC-CCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHHHhh--
Q 012314 153 DDGIIDSHGTPMSMQMFRIAPKMP-EMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTT-- 229 (466)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~~~~-- 229 (466)
..+..+..+.+... ....+|+++ +++..+++ ..+.. ..+...+.+....+.+++.+++||+.+||......
T Consensus 158 ~~~~~~~~~~~~~~-~~v~iPgl~~pl~~~dlp-~~~~~----~~~~~~~~~~~~~~~~~~gvlvNt~~eLe~~~~~~l~ 231 (481)
T PLN02554 158 DEKKYDVSELEDSE-VELDVPSLTRPYPVKCLP-SVLLS----KEWLPLFLAQARRFREMKGILVNTVAELEPQALKFFS 231 (481)
T ss_pred cccccCccccCCCC-ceeECCCCCCCCCHHHCC-CcccC----HHHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHH
Confidence 21101100111111 223588874 67777777 33322 12334444555667889999999999999854432
Q ss_pred -----cCCcceeccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhCCCCEEEE
Q 012314 230 -----FPELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWV 304 (466)
Q Consensus 230 -----~p~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~ 304 (466)
.|+++.|||++....... ....+.+++|.+|+++++++++|||||||....+.+++++++.+++.++++|||+
T Consensus 232 ~~~~~~~~v~~vGpl~~~~~~~~--~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~la~~l~~~~~~flW~ 309 (481)
T PLN02554 232 GSSGDLPPVYPVGPVLHLENSGD--DSKDEKQSEILRWLDEQPPKSVVFLCFGSMGGFSEEQAREIAIALERSGHRFLWS 309 (481)
T ss_pred hcccCCCCEEEeCCCcccccccc--ccccccchHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHHHHcCCCeEEE
Confidence 368999999943222110 0001345679999999888899999999998889999999999999999999999
Q ss_pred EcCCCC----------CCCCCCCchhHHHHhcCCceeecccchhhhhcCCCcccceeccCCchhhhhhhcCcceeecccc
Q 012314 305 VRPDIT----------TDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYF 374 (466)
Q Consensus 305 ~~~~~~----------~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~ 374 (466)
++.... ....+.+|++++++..+|+++++|+||.+||+|++|++|||||||||++||+++|||||++|++
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~lp~~~~~r~~~~g~v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Ea~~~GVP~l~~P~~ 389 (481)
T PLN02554 310 LRRASPNIMKEPPGEFTNLEEILPEGFLDRTKDIGKVIGWAPQVAVLAKPAIGGFVTHCGWNSILESLWFGVPMAAWPLY 389 (481)
T ss_pred EcCCcccccccccccccchhhhCChHHHHHhccCceEEeeCCHHHHhCCcccCcccccCccchHHHHHHcCCCEEecCcc
Confidence 975210 0011236889998899999999999999999999999999999999999999999999999999
Q ss_pred cchhhhHHH-HHHhhhceeEeecC--------CCCCcCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHhcCCCcHHH
Q 012314 375 GDQFLNERY-ICDFWKVGLKFDRD--------EGGIITREEIKNKVDQVLG-NQDFKARALELKEKAMSSVREGGSSYKT 444 (466)
Q Consensus 375 ~DQ~~~a~r-v~~~~G~G~~l~~~--------~~~~~~~~~l~~~i~~ll~-~~~~r~~a~~~~~~~~~~~~~~g~~~~~ 444 (466)
+||+.||++ +++ +|+|+.+..+ +...++.++|.++|+++|. |++||+||+++++++++++++||++.++
T Consensus 390 ~DQ~~Na~~~v~~-~g~Gv~l~~~~~~~~~~~~~~~~~~e~l~~av~~vm~~~~~~r~~a~~l~~~~~~av~~gGss~~~ 468 (481)
T PLN02554 390 AEQKFNAFEMVEE-LGLAVEIRKYWRGDLLAGEMETVTAEEIERGIRCLMEQDSDVRKRVKEMSEKCHVALMDGGSSHTA 468 (481)
T ss_pred ccchhhHHHHHHH-hCceEEeeccccccccccccCeEcHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCChHHHH
Confidence 999999954 666 7999999621 1246899999999999996 7899999999999999999999999999
Q ss_pred HHHHHHHHHHhc
Q 012314 445 FQNFLQWVKTNA 456 (466)
Q Consensus 445 ~~~~v~~~~~~~ 456 (466)
+++||+++..+.
T Consensus 469 l~~lv~~~~~~~ 480 (481)
T PLN02554 469 LKKFIQDVTKNI 480 (481)
T ss_pred HHHHHHHHHhhC
Confidence 999999998763
|
|
| >PLN00164 glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-63 Score=485.01 Aligned_cols=440 Identities=26% Similarity=0.477 Sum_probs=338.2
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCC----CEEEEEeCCcchH----HHHHhhhcCCCCCCCeEEEecCCCCCCC
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHG----FRVTFVNTDYNHK----RVVESLQGKNYLGEQIHLVSIPDGMEPW 72 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rG----h~Vt~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (466)
|+|.||+++|++++||++||+.||+.|+.+| +.|||++++.+.. .+............+++++.+|++.++.
T Consensus 1 ~~~~HVVlvPfpaqGHi~P~l~LAk~La~~g~~~~~~vT~~~t~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~p~ 80 (480)
T PLN00164 1 MAAPTVVLLPVWGSGHLMSMLEAGKRLLASSGGGALSLTVLVMPPPTPESASEVAAHVRREAASGLDIRFHHLPAVEPPT 80 (480)
T ss_pred CCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCCCcEEEEEEEcCCCccchhHHHHHHHhhcccCCCCEEEEECCCCCCCC
Confidence 8999999999999999999999999999986 7999999876422 3333221111111259999999764322
Q ss_pred CCCccHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEEeccchhHHHHHHhhccccc
Q 012314 73 EDRNDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLI 152 (466)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~ 152 (466)
...+...++..+...+.+.++++++.+. .+++|||+|.+..|+..+|+++|||++.|+++.+.....+.+++...
T Consensus 81 -~~e~~~~~~~~~~~~~~~~l~~~L~~l~----~pv~cIV~D~f~~Wa~dVA~elgIP~v~F~t~sA~~~~~~~~~~~~~ 155 (480)
T PLN00164 81 -DAAGVEEFISRYIQLHAPHVRAAIAGLS----CPVAALVVDFFCTPLLDVARELAVPAYVYFTSTAAMLALMLRLPALD 155 (480)
T ss_pred -ccccHHHHHHHHHHhhhHHHHHHHHhcC----CCceEEEECCcchhHHHHHHHhCCCEEEEECccHHHHHHHhhhhhhc
Confidence 1223445555566677788888887751 35799999999999999999999999999999999888888765432
Q ss_pred ccCccCCCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHHHhhc--
Q 012314 153 DDGIIDSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTF-- 230 (466)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~~~~~-- 230 (466)
.. .+. ..+... ....+|+++.++..+++ .++..+. .....++....+...+++.+++||+.+||+.....+
T Consensus 156 ~~--~~~-~~~~~~-~~~~iPGlp~l~~~dlp-~~~~~~~--~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~ 228 (480)
T PLN00164 156 EE--VAV-EFEEME-GAVDVPGLPPVPASSLP-APVMDKK--SPNYAWFVYHGRRFMEAAGIIVNTAAELEPGVLAAIAD 228 (480)
T ss_pred cc--ccC-cccccC-cceecCCCCCCChHHCC-chhcCCC--cHHHHHHHHHHHhhhhcCEEEEechHHhhHHHHHHHHh
Confidence 11 000 011111 12358999888888888 4333221 112233334445667899999999999998655433
Q ss_pred ---------CCcceeccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhCCCCE
Q 012314 231 ---------PELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRPF 301 (466)
Q Consensus 231 ---------p~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~ 301 (466)
++++.|||++...... .....+++|.+|+++++++++|||||||....+.+++.+++.+++.++++|
T Consensus 229 ~~~~~~~~~~~v~~vGPl~~~~~~~----~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~q~~ela~gL~~s~~~f 304 (480)
T PLN00164 229 GRCTPGRPAPTVYPIGPVISLAFTP----PAEQPPHECVRWLDAQPPASVVFLCFGSMGFFDAPQVREIAAGLERSGHRF 304 (480)
T ss_pred ccccccCCCCceEEeCCCccccccC----CCccchHHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHHHcCCCE
Confidence 5799999998532111 112345679999999988899999999998889999999999999999999
Q ss_pred EEEEcCCCCC--------CCCCCCchhHHHHhcCCceee-cccchhhhhcCCCcccceeccCCchhhhhhhcCcceeecc
Q 012314 302 LWVVRPDITT--------DANDRYPEGFQERVAARGQMI-SWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWP 372 (466)
Q Consensus 302 i~~~~~~~~~--------~~~~~~~~~~~~~~~~n~~~~-~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P 372 (466)
||++...... +....+|+++.++..+.+.++ +|+||.+||+|+++++|||||||||++||+++|||||++|
T Consensus 305 lWv~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~PQ~~iL~h~~vg~fvtH~GwnS~~Eai~~GVP~l~~P 384 (480)
T PLN00164 305 LWVLRGPPAAGSRHPTDADLDELLPEGFLERTKGRGLVWPTWAPQKEILAHAAVGGFVTHCGWNSVLESLWHGVPMAPWP 384 (480)
T ss_pred EEEEcCCcccccccccccchhhhCChHHHHHhcCCCeEEeecCCHHHHhcCcccCeEEeecccchHHHHHHcCCCEEeCC
Confidence 9999853210 111237788888877777766 9999999999999999999999999999999999999999
Q ss_pred cccchhhhHHHHHHhhhceeEeecCC--CCCcCHHHHHHHHHHHhcCH-----HHHHHHHHHHHHHHHHHhcCCCcHHHH
Q 012314 373 YFGDQFLNERYICDFWKVGLKFDRDE--GGIITREEIKNKVDQVLGNQ-----DFKARALELKEKAMSSVREGGSSYKTF 445 (466)
Q Consensus 373 ~~~DQ~~~a~rv~~~~G~G~~l~~~~--~~~~~~~~l~~~i~~ll~~~-----~~r~~a~~~~~~~~~~~~~~g~~~~~~ 445 (466)
+++||+.||+++++.+|+|+.+..++ .+.++.++|.++|+++|.++ .+|++|+++++++++++.+||+|.+++
T Consensus 385 ~~~DQ~~Na~~~~~~~gvG~~~~~~~~~~~~~~~e~l~~av~~vm~~~~~~~~~~r~~a~~~~~~~~~a~~~gGSS~~~l 464 (480)
T PLN00164 385 LYAEQHLNAFELVADMGVAVAMKVDRKRDNFVEAAELERAVRSLMGGGEEEGRKAREKAAEMKAACRKAVEEGGSSYAAL 464 (480)
T ss_pred ccccchhHHHHHHHHhCeEEEeccccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhcCCCcHHHHH
Confidence 99999999998865479999996421 13579999999999999653 589999999999999999999999999
Q ss_pred HHHHHHHHHhc
Q 012314 446 QNFLQWVKTNA 456 (466)
Q Consensus 446 ~~~v~~~~~~~ 456 (466)
++|++.+....
T Consensus 465 ~~~v~~~~~~~ 475 (480)
T PLN00164 465 QRLAREIRHGA 475 (480)
T ss_pred HHHHHHHHhcc
Confidence 99999998763
|
|
| >PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-63 Score=481.22 Aligned_cols=444 Identities=28% Similarity=0.453 Sum_probs=329.4
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCC----CCCCCCC-Cc
Q 012314 2 SRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPD----GMEPWED-RN 76 (466)
Q Consensus 2 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-~~ 76 (466)
++.||+++|++++||++||+.||+.|+.+|+.|||++++.+...+..... ...+++++.+|. +++++.. ..
T Consensus 8 ~~~HVvl~PfpaqGHi~P~l~LAk~La~~G~~VTfv~T~~n~~~~~~~~~----~~~~i~~~~lp~P~~~~lPdG~~~~~ 83 (477)
T PLN02863 8 AGTHVLVFPFPAQGHMIPLLDLTHRLALRGLTITVLVTPKNLPFLNPLLS----KHPSIETLVLPFPSHPSIPSGVENVK 83 (477)
T ss_pred CCCEEEEecCcccchHHHHHHHHHHHHhCCCEEEEEeCCCcHHHHhhhcc----cCCCeeEEeCCCCCcCCCCCCCcChh
Confidence 36899999999999999999999999999999999999988877654321 113577766541 3333311 11
Q ss_pred c----HHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEEeccchhHHHHHHhhccccc
Q 012314 77 D----LGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLI 152 (466)
Q Consensus 77 ~----~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~ 152 (466)
+ ....+......+.+.+.++++++ . .+++|||+|.+.+|+..+|+.+|||++.|++++++.+..+++++...
T Consensus 84 ~~~~~~~~~~~~a~~~~~~~~~~~l~~~---~-~~p~cvI~D~f~~Wa~dVA~e~GIP~~~F~t~sA~~~~~~~~~~~~~ 159 (477)
T PLN02863 84 DLPPSGFPLMIHALGELYAPLLSWFRSH---P-SPPVAIISDMFLGWTQNLACQLGIRRFVFSPSGAMALSIMYSLWREM 159 (477)
T ss_pred hcchhhHHHHHHHHHHhHHHHHHHHHhC---C-CCCeEEEEcCchHhHHHHHHHcCCCEEEEeccCHHHHHHHHHHhhcc
Confidence 1 11122222234455555555542 1 46899999999999999999999999999999999999888765321
Q ss_pred ccCccCCCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHHHhhc--
Q 012314 153 DDGIIDSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTF-- 230 (466)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~~~~~-- 230 (466)
+..... ......-.+..+|+++.++..+++ .++............+.+.......++.+++||+.+||+......
T Consensus 160 ~~~~~~--~~~~~~~~~~~iPg~~~~~~~dlp-~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~ 236 (477)
T PLN02863 160 PTKINP--DDQNEILSFSKIPNCPKYPWWQIS-SLYRSYVEGDPAWEFIKDSFRANIASWGLVVNSFTELEGIYLEHLKK 236 (477)
T ss_pred cccccc--cccccccccCCCCCCCCcChHhCc-hhhhccCccchHHHHHHHHHhhhccCCEEEEecHHHHHHHHHHHHHh
Confidence 110000 000000012257888888888888 443321111223334444444456778899999999998766543
Q ss_pred ----CCcceeccccCCCCCC----CCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhCCCCEE
Q 012314 231 ----PELLPIGPLLASNRLG----NTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRPFL 302 (466)
Q Consensus 231 ----p~v~~VGpl~~~~~~~----~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i 302 (466)
++++.|||++...... .........+++|..|++.++++++|||||||....+.+++.+++.+++.++++||
T Consensus 237 ~~~~~~v~~IGPL~~~~~~~~~~~~~~~~~~~~~~~~~~WLd~~~~~svVyvsfGS~~~~~~~~~~ela~gL~~~~~~fl 316 (477)
T PLN02863 237 ELGHDRVWAVGPILPLSGEKSGLMERGGPSSVSVDDVMTWLDTCEDHKVVYVCFGSQVVLTKEQMEALASGLEKSGVHFI 316 (477)
T ss_pred hcCCCCeEEeCCCcccccccccccccCCcccccHHHHHHHHhcCCCCceEEEEeeceecCCHHHHHHHHHHHHhCCCcEE
Confidence 5799999997533210 00000111245799999999888999999999988899999999999999999999
Q ss_pred EEEcCCCC-CCCCCCCchhHHHHhcC-CceeecccchhhhhcCCCcccceeccCCchhhhhhhcCcceeecccccchhhh
Q 012314 303 WVVRPDIT-TDANDRYPEGFQERVAA-RGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLN 380 (466)
Q Consensus 303 ~~~~~~~~-~~~~~~~~~~~~~~~~~-n~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~~ 380 (466)
|+++...+ ......+|+++.++..+ ++++.+|+||.+||+|++|++|||||||||++||+++|||+|++|+++||+.|
T Consensus 317 w~~~~~~~~~~~~~~lp~~~~~r~~~~g~~v~~w~PQ~~vL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~n 396 (477)
T PLN02863 317 WCVKEPVNEESDYSNIPSGFEDRVAGRGLVIRGWAPQVAILSHRAVGAFLTHCGWNSVLEGLVAGVPMLAWPMAADQFVN 396 (477)
T ss_pred EEECCCcccccchhhCCHHHHHHhccCCEEecCCCCHHHHhcCCCcCeEEecCCchHHHHHHHcCCCEEeCCccccchhh
Confidence 99975321 11123578888877654 45556999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhc
Q 012314 381 ERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVL-GNQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVKTNA 456 (466)
Q Consensus 381 a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll-~~~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~~ 456 (466)
|+++++.+|+|+.+...+...++.+++.++|++++ ++++||+||+++++++++++++||+|.+++++||+.+...+
T Consensus 397 a~~v~~~~gvG~~~~~~~~~~~~~~~v~~~v~~~m~~~~~~r~~a~~l~e~a~~Av~~gGSS~~~l~~~v~~i~~~~ 473 (477)
T PLN02863 397 ASLLVDELKVAVRVCEGADTVPDSDELARVFMESVSENQVERERAKELRRAALDAIKERGSSVKDLDGFVKHVVELG 473 (477)
T ss_pred HHHHHHhhceeEEeccCCCCCcCHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHhc
Confidence 99987557999999532123568999999999998 67899999999999999999999999999999999998764
|
|
| >PLN02992 coniferyl-alcohol glucosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-63 Score=477.73 Aligned_cols=428 Identities=26% Similarity=0.450 Sum_probs=330.2
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHH-hCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCC----CCCCCCCCcc
Q 012314 3 RPRVLVMPAPAQGHVIPLLEFSQCLA-KHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPD----GMEPWEDRND 77 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~la~~L~-~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 77 (466)
+.||+++|++++||++|++.||+.|+ .+|++|||++++.+...+.+... ...+++++.+|. ++++.. .+
T Consensus 5 ~pHVvl~P~paqGHi~P~l~LAk~La~~~g~~vT~v~t~~n~~~~~~~~~----~~~~i~~~~lp~p~~~glp~~~--~~ 78 (481)
T PLN02992 5 KPHAAMFSSPGMGHVIPVIELGKRLSANHGFHVTVFVLETDAASAQSKFL----NSTGVDIVGLPSPDISGLVDPS--AH 78 (481)
T ss_pred CcEEEEeCCcccchHHHHHHHHHHHHhCCCcEEEEEeCCCchhhhhhccc----cCCCceEEECCCccccCCCCCC--cc
Confidence 67999999999999999999999998 78999999999987655533211 112588988884 333111 12
Q ss_pred HHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEEeccchhHHHHHHhhcccccccCcc
Q 012314 78 LGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGII 157 (466)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~ 157 (466)
....+..+...+.+.++++++++. .+|+|||+|.+.+|+..+|+.+|||++.|+++.+.....+.+++........
T Consensus 79 ~~~~~~~~~~~~~~~~~~~l~~~~----~~p~cvV~D~f~~Wa~dVA~elgIP~v~F~t~sA~~~~~~~~~~~~~~~~~~ 154 (481)
T PLN02992 79 VVTKIGVIMREAVPTLRSKIAEMH----QKPTALIVDLFGTDALCLGGEFNMLTYIFIASNARFLGVSIYYPTLDKDIKE 154 (481)
T ss_pred HHHHHHHHHHHhHHHHHHHHHhcC----CCCeEEEECCcchhHHHHHHHcCCCEEEEecCcHHHHHHHHhhhhhcccccc
Confidence 222333334455677788877642 4689999999999999999999999999999999887776665532111000
Q ss_pred CCCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHHHhhc-------
Q 012314 158 DSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTF------- 230 (466)
Q Consensus 158 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~~~~~------- 230 (466)
+ ... ......+|+++.++..+++ ..+..+. ......+.+......+++.+++||+.+||......+
T Consensus 155 ~---~~~-~~~~~~iPg~~~l~~~dlp-~~~~~~~--~~~~~~~~~~~~~~~~a~gvlvNTf~eLE~~~l~~l~~~~~~~ 227 (481)
T PLN02992 155 E---HTV-QRKPLAMPGCEPVRFEDTL-DAYLVPD--EPVYRDFVRHGLAYPKADGILVNTWEEMEPKSLKSLQDPKLLG 227 (481)
T ss_pred c---ccc-CCCCcccCCCCccCHHHhh-HhhcCCC--cHHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHhhccccc
Confidence 0 000 1113468998888888877 3222221 123444455556677899999999999998766542
Q ss_pred ----CCcceeccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhCCCCEEEEEc
Q 012314 231 ----PELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVR 306 (466)
Q Consensus 231 ----p~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~ 306 (466)
++++.|||++...... ..+++|.+||+.++++++|||||||...++.+++++++.+|+.++++|||++.
T Consensus 228 ~~~~~~v~~VGPl~~~~~~~-------~~~~~c~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flW~~r 300 (481)
T PLN02992 228 RVARVPVYPIGPLCRPIQSS-------KTDHPVLDWLNKQPNESVLYISFGSGGSLSAKQLTELAWGLEMSQQRFVWVVR 300 (481)
T ss_pred cccCCceEEecCccCCcCCC-------cchHHHHHHHHcCCCCceEEEeecccccCCHHHHHHHHHHHHHcCCCEEEEEe
Confidence 4699999998643211 23556999999988889999999999999999999999999999999999996
Q ss_pred CCCCC---------------C-CCCCCchhHHHHhcCCcee-ecccchhhhhcCCCcccceeccCCchhhhhhhcCccee
Q 012314 307 PDITT---------------D-ANDRYPEGFQERVAARGQM-ISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFL 369 (466)
Q Consensus 307 ~~~~~---------------~-~~~~~~~~~~~~~~~n~~~-~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l 369 (466)
...+. . ..+.+|++|+++..++..+ .+|+||.+||+|+++++|||||||||++||+++|||||
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~f~eR~~~rg~vv~~W~PQ~~iL~h~~vg~FitH~G~nS~~Eal~~GVP~l 380 (481)
T PLN02992 301 PPVDGSACSAYFSANGGETRDNTPEYLPEGFVSRTHDRGFVVPSWAPQAEILAHQAVGGFLTHCGWSSTLESVVGGVPMI 380 (481)
T ss_pred CCcccccccccccCcccccccchhhhCCHHHHHHhcCCCEEEeecCCHHHHhCCcccCeeEecCchhHHHHHHHcCCCEE
Confidence 32110 0 0124788999888766655 59999999999999999999999999999999999999
Q ss_pred ecccccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHHh--cCCCcHHH
Q 012314 370 CWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQ---DFKARALELKEKAMSSVR--EGGSSYKT 444 (466)
Q Consensus 370 ~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~---~~r~~a~~~~~~~~~~~~--~~g~~~~~ 444 (466)
++|+++||+.||+++++.+|+|+.++.. ...++.++|+++|+++|.++ .+|+++++++++++++++ +||+|.++
T Consensus 381 ~~P~~~DQ~~na~~~~~~~g~gv~~~~~-~~~~~~~~l~~av~~vm~~~~g~~~r~~a~~~~~~a~~Av~~~~GGSS~~~ 459 (481)
T PLN02992 381 AWPLFAEQNMNAALLSDELGIAVRSDDP-KEVISRSKIEALVRKVMVEEEGEEMRRKVKKLRDTAEMSLSIDGGGVAHES 459 (481)
T ss_pred ecCccchhHHHHHHHHHHhCeeEEecCC-CCcccHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhcCCCCCchHHH
Confidence 9999999999999996337999999631 13589999999999999763 899999999999999995 59999999
Q ss_pred HHHHHHHHHHh
Q 012314 445 FQNFLQWVKTN 455 (466)
Q Consensus 445 ~~~~v~~~~~~ 455 (466)
+++|++.+..-
T Consensus 460 l~~~v~~~~~~ 470 (481)
T PLN02992 460 LCRVTKECQRF 470 (481)
T ss_pred HHHHHHHHHHH
Confidence 99999988764
|
|
| >PLN03004 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-63 Score=477.25 Aligned_cols=431 Identities=25% Similarity=0.451 Sum_probs=324.0
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCC--CEEEE--EeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCC--C
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHG--FRVTF--VNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWE--D 74 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rG--h~Vt~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 74 (466)
|.+.||+++|++++||++||+.||+.|+.+| +.||+ +++..+...+...........++++++.+|++.+... .
T Consensus 1 ~~~~Hvvl~P~p~qGHi~P~l~LA~~La~~g~~~~vti~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~~~~~ 80 (451)
T PLN03004 1 MGEEAIVLYPAPPIGHLVSMVELGKTILSKNPSLSIHIILVPPPYQPESTATYISSVSSSFPSITFHHLPAVTPYSSSST 80 (451)
T ss_pred CCCcEEEEeCCcccchHHHHHHHHHHHHhCCCceEEEEEEecCcchhhhhhhhhccccCCCCCeEEEEcCCCCCCCCccc
Confidence 8899999999999999999999999999998 55665 4444332222211111111123699999997653221 1
Q ss_pred C-ccHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEEeccchhHHHHHHhhcccccc
Q 012314 75 R-NDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLID 153 (466)
Q Consensus 75 ~-~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~ 153 (466)
. .+....+..+...+.+.++++++++.. . .+++|||+|.+..|+..+|+++|||++.|+++++.....+.+++....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-~-~pv~cII~D~~~~Wa~~vA~~lgIP~v~F~t~sA~~~~~~~~~~~~~~ 158 (451)
T PLN03004 81 SRHHHESLLLEILCFSNPSVHRTLFSLSR-N-FNVRAMIIDFFCTAVLDITADFTFPVYFFYTSGAACLAFSFYLPTIDE 158 (451)
T ss_pred cccCHHHHHHHHHHhhhHHHHHHHHhcCC-C-CCceEEEECCcchhHHHHHHHhCCCEEEEeCHhHHHHHHHHHHHhccc
Confidence 1 123333333445677778888887632 1 356999999999999999999999999999999999988887654211
Q ss_pred cCccCCCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHHHhhc---
Q 012314 154 DGIIDSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTF--- 230 (466)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~~~~~--- 230 (466)
. .+.... .......+|+++.++..+++ .++..+. .....++......+.+++.+++||+.+||+.....+
T Consensus 159 ~--~~~~~~--~~~~~v~iPg~p~l~~~dlp-~~~~~~~--~~~~~~~~~~~~~~~~~~~vl~NTf~eLE~~~l~~l~~~ 231 (451)
T PLN03004 159 T--TPGKNL--KDIPTVHIPGVPPMKGSDMP-KAVLERD--DEVYDVFIMFGKQLSKSSGIIINTFDALENRAIKAITEE 231 (451)
T ss_pred c--cccccc--ccCCeecCCCCCCCChHHCc-hhhcCCc--hHHHHHHHHHHHhhcccCeeeeeeHHHhHHHHHHHHHhc
Confidence 1 000001 11123468999888888888 4443322 223444555555667889999999999998655432
Q ss_pred ---CCcceeccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhCCCCEEEEEcC
Q 012314 231 ---PELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRP 307 (466)
Q Consensus 231 ---p~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~ 307 (466)
++++.|||++........ . ...+.+|.+|+|+++++++|||||||...++.+++++++.+|+.++++|||++..
T Consensus 232 ~~~~~v~~vGPl~~~~~~~~~-~--~~~~~~c~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~~FlW~~r~ 308 (451)
T PLN03004 232 LCFRNIYPIGPLIVNGRIEDR-N--DNKAVSCLNWLDSQPEKSVVFLCFGSLGLFSKEQVIEIAVGLEKSGQRFLWVVRN 308 (451)
T ss_pred CCCCCEEEEeeeccCcccccc-c--cchhhHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHHHCCCCEEEEEcC
Confidence 579999999853221100 1 1224569999999988899999999998899999999999999999999999985
Q ss_pred CCCCC----CCC-CCchhHHHHhcC-CceeecccchhhhhcCCCcccceeccCCchhhhhhhcCcceeecccccchhhhH
Q 012314 308 DITTD----AND-RYPEGFQERVAA-RGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNE 381 (466)
Q Consensus 308 ~~~~~----~~~-~~~~~~~~~~~~-n~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a 381 (466)
....+ ... .+|++|+++..+ |+++.+|+||.+||+|+++++|||||||||++||+++|||+|++|+++||+.||
T Consensus 309 ~~~~~~~~~~~~~~lp~gf~er~~~~g~~v~~W~PQ~~iL~H~~v~~FvTH~G~nS~lEal~~GVP~v~~P~~~DQ~~na 388 (451)
T PLN03004 309 PPELEKTELDLKSLLPEGFLSRTEDKGMVVKSWAPQVPVLNHKAVGGFVTHCGWNSILEAVCAGVPMVAWPLYAEQRFNR 388 (451)
T ss_pred CccccccccchhhhCChHHHHhccCCcEEEEeeCCHHHHhCCCccceEeccCcchHHHHHHHcCCCEEeccccccchhhH
Confidence 31100 012 378899888764 555669999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCCcHH
Q 012314 382 RYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALELKEKAMSSVREGGSSYK 443 (466)
Q Consensus 382 ~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~~~~~~~g~~~~ 443 (466)
+++++.+|+|+.++.++...++.++|+++|+++|.|++||+++++++++.+.++++||+|.+
T Consensus 389 ~~~~~~~g~g~~l~~~~~~~~~~e~l~~av~~vm~~~~~r~~a~~~~~~a~~Av~~GGSS~~ 450 (451)
T PLN03004 389 VMIVDEIKIAISMNESETGFVSSTEVEKRVQEIIGECPVRERTMAMKNAAELALTETGSSHT 450 (451)
T ss_pred HHHHHHhCceEEecCCcCCccCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 99985479999997421236799999999999999999999999999999999999999853
|
|
| >PLN03015 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-62 Score=470.55 Aligned_cols=433 Identities=26% Similarity=0.447 Sum_probs=331.7
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhC-CCEEEEEeCCcchHHHH-Hh-hhcCCCCCCCeEEEecCCCCCCC--CCC
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKH-GFRVTFVNTDYNHKRVV-ES-LQGKNYLGEQIHLVSIPDGMEPW--EDR 75 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~r-Gh~Vt~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~ 75 (466)
|.+.||+++|++++||++||+.||+.|+.+ |..|||+++..+...+. +. ...... ..+++++.+|....+. ...
T Consensus 1 ~~~pHvvl~P~p~qGHi~P~l~LAk~La~~~g~~vT~v~t~~~~~~~~~~~~~~~~~~-~~~i~~~~lp~~~~~~l~~~~ 79 (470)
T PLN03015 1 MDQPHALLVASPGLGHLIPILELGNRLSSVLNIHVTILAVTSGSSSPTETEAIHAAAA-RTTCQITEIPSVDVDNLVEPD 79 (470)
T ss_pred CCCcEEEEECCcccccHHHHHHHHHHHHhCCCCeEEEEECCCchhhhccccccccccC-CCceEEEECCCCccccCCCCC
Confidence 889999999999999999999999999977 99999999886554331 11 111001 1259999998533211 101
Q ss_pred ccHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCc-eEEeccchhHHHHHHhhccccccc
Q 012314 76 NDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVR-GAVFWPSSAASVALVFRIPKLIDD 154 (466)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP-~v~~~~~~~~~~~~~~~~p~~~~~ 154 (466)
.+....+....+.+.+.++++++++. .+++|||+|.+.+|+..+|+++||| .++++++.++....+.++|....
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~l~~l~----~~~~ciV~D~f~~w~~~vA~~lgIP~~~~f~~~~a~~~~~~~~l~~~~~- 154 (470)
T PLN03015 80 ATIFTKMVVKMRAMKPAVRDAVKSMK----RKPTVMIVDFFGTALMSIADDVGVTAKYVYIPSHAWFLAVMVYLPVLDT- 154 (470)
T ss_pred ccHHHHHHHHHHhchHHHHHHHHhcC----CCCeEEEEcCCcHHHHHHHHHcCCCEEEEEcCHHHHHHHHHHhhhhhhc-
Confidence 13333344444577888999998753 3679999999999999999999999 68888888888777777654211
Q ss_pred CccCCCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHHHhhc----
Q 012314 155 GIIDSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTF---- 230 (466)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~~~~~---- 230 (466)
..+.. ...... ...+|+++.++..+++ ..+..+. ... ...+....+...+++.+++||+.+||+.....+
T Consensus 155 -~~~~~-~~~~~~-~~~vPg~p~l~~~dlp-~~~~~~~-~~~-~~~~~~~~~~~~~a~gvlvNTf~eLE~~~~~~l~~~~ 228 (470)
T PLN03015 155 -VVEGE-YVDIKE-PLKIPGCKPVGPKELM-ETMLDRS-DQQ-YKECVRSGLEVPMSDGVLVNTWEELQGNTLAALREDM 228 (470)
T ss_pred -ccccc-cCCCCC-eeeCCCCCCCChHHCC-HhhcCCC-cHH-HHHHHHHHHhcccCCEEEEechHHHhHHHHHHHHhhc
Confidence 11100 001011 2468999989999988 4332222 112 223334455678899999999999998655443
Q ss_pred -------CCcceeccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhCCCCEEE
Q 012314 231 -------PELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRPFLW 303 (466)
Q Consensus 231 -------p~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~ 303 (466)
++++.|||++..... ...+++|.+|||.++++++|||||||....+.+++++++.+|+.++++|||
T Consensus 229 ~~~~~~~~~v~~VGPl~~~~~~-------~~~~~~~~~WLd~~~~~sVvyvsFGS~~~~~~~q~~ela~gl~~s~~~FlW 301 (470)
T PLN03015 229 ELNRVMKVPVYPIGPIVRTNVH-------VEKRNSIFEWLDKQGERSVVYVCLGSGGTLTFEQTVELAWGLELSGQRFVW 301 (470)
T ss_pred ccccccCCceEEecCCCCCccc-------ccchHHHHHHHHhCCCCCEEEEECCcCCcCCHHHHHHHHHHHHhCCCcEEE
Confidence 569999999853211 122347999999998899999999999999999999999999999999999
Q ss_pred EEcCCCC--------CC-CCCCCchhHHHHhcCCceee-cccchhhhhcCCCcccceeccCCchhhhhhhcCcceeeccc
Q 012314 304 VVRPDIT--------TD-ANDRYPEGFQERVAARGQMI-SWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPY 373 (466)
Q Consensus 304 ~~~~~~~--------~~-~~~~~~~~~~~~~~~n~~~~-~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~ 373 (466)
++..... .. ..+.+|+++.++..+.+.++ +|+||.++|+|+++++|||||||||++||+++|||||++|+
T Consensus 302 v~r~~~~~~~~~~~~~~~~~~~lp~~f~er~~~rGl~v~~W~PQ~~vL~h~~vg~fvtH~GwnS~~Eai~~GvP~v~~P~ 381 (470)
T PLN03015 302 VLRRPASYLGASSSDDDQVSASLPEGFLDRTRGVGLVVTQWAPQVEILSHRSIGGFLSHCGWSSVLESLTKGVPIVAWPL 381 (470)
T ss_pred EEecCccccccccccccchhhcCChHHHHhhccCceEEEecCCHHHHhccCccCeEEecCCchhHHHHHHcCCCEEeccc
Confidence 9963210 00 12357889998888777655 99999999999999999999999999999999999999999
Q ss_pred ccchhhhHHHHHHhhhceeEeec-CCCCCcCHHHHHHHHHHHhc-----CHHHHHHHHHHHHHHHHHHhcCCCcHHHHHH
Q 012314 374 FGDQFLNERYICDFWKVGLKFDR-DEGGIITREEIKNKVDQVLG-----NQDFKARALELKEKAMSSVREGGSSYKTFQN 447 (466)
Q Consensus 374 ~~DQ~~~a~rv~~~~G~G~~l~~-~~~~~~~~~~l~~~i~~ll~-----~~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~ 447 (466)
++||+.||+++++.+|+|+.+.. .+...++.++|.++|+++|. ..++|+||++++++.++++++||+|.+++++
T Consensus 382 ~~DQ~~na~~~~~~~gvg~~~~~~~~~~~v~~e~i~~~v~~lm~~~~eeg~~~R~ra~~lk~~a~~Av~eGGSS~~nl~~ 461 (470)
T PLN03015 382 YAEQWMNATLLTEEIGVAVRTSELPSEKVIGREEVASLVRKIVAEEDEEGQKIRAKAEEVRVSSERAWSHGGSSYNSLFE 461 (470)
T ss_pred ccchHHHHHHHHHHhCeeEEecccccCCccCHHHHHHHHHHHHccCcccHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHH
Confidence 99999999999655899999951 11246899999999999994 2489999999999999999999999999999
Q ss_pred HHHHH
Q 012314 448 FLQWV 452 (466)
Q Consensus 448 ~v~~~ 452 (466)
|+.++
T Consensus 462 ~~~~~ 466 (470)
T PLN03015 462 WAKRC 466 (470)
T ss_pred HHHhc
Confidence 99876
|
|
| >PLN02167 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-62 Score=480.20 Aligned_cols=445 Identities=24% Similarity=0.410 Sum_probs=329.3
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCC---CEEEEEeCCcchH-HHHHhhhcCCCCCCCeEEEecCCCCCCC--C-
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHG---FRVTFVNTDYNHK-RVVESLQGKNYLGEQIHLVSIPDGMEPW--E- 73 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rG---h~Vt~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~- 73 (466)
|++.||+++|++++||++||+.||+.|+.+| +.||++++..+.. .............++++|+.+|++..+. +
T Consensus 1 ~~~~hVv~~PfpaqGHi~P~l~LAk~La~~G~~~t~vt~~~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~p~~~~~ 80 (475)
T PLN02167 1 KKEAELIFVPFPSTGHILVTIEFAKRLINLDRRIHTITILYWSLPFAPQADAFLKSLIASEPRIRLVTLPEVQDPPPMEL 80 (475)
T ss_pred CCccEEEEeCChhhhhHHHHHHHHHHHHhCCCCeEEEEEEECCCCcchhhhHHHhhcccCCCCeEEEECCCCCCCccccc
Confidence 8899999999999999999999999999998 4577777543221 1111111101112369999999654221 1
Q ss_pred CCccHHHHHHHHHHhccHHHHHHHHHHhcC----CCCCccEEEeCCCchhHHHHHHHcCCceEEeccchhHHHHHHhhcc
Q 012314 74 DRNDLGKLIEKCLQVMPGKLEELIEEINSR----EDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIP 149 (466)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~----~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p 149 (466)
........+..+.+.+.+.+++.++++..+ +..+++|||+|.+.+|+..+|+++|||++.|+++++..+..+.+++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~pv~cvV~D~f~~Wa~dVA~elgIP~v~F~t~~A~~~~~~~~~~ 160 (475)
T PLN02167 81 FVKASEAYILEFVKKMVPLVRDALSTLVSSRDESDSVRVAGLVLDFFCVPLIDVGNEFNLPSYIFLTCNAGFLGMMKYLP 160 (475)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCeEEEEECCccHHHHHHHHHhCCCEEEEECccHHHHHHHHHHH
Confidence 011222334444456666777777765321 1024699999999999999999999999999999998888877765
Q ss_pred cccccCccCCCCCCC-ccccccccCCC-CCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHHH
Q 012314 150 KLIDDGIIDSHGTPM-SMQMFRIAPKM-PEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAF 227 (466)
Q Consensus 150 ~~~~~~~~~~~~~~~-~~~~~~~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~~ 227 (466)
..... ... ..+. ..+....+|++ +.++..+++ .++..+. ....+....+...+++.+++||+.+||+...
T Consensus 161 ~~~~~--~~~-~~~~~~~~~~~~iPgl~~~l~~~dlp-~~~~~~~----~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~~ 232 (475)
T PLN02167 161 ERHRK--TAS-EFDLSSGEEELPIPGFVNSVPTKVLP-PGLFMKE----SYEAWVEIAERFPEAKGILVNSFTELEPNAF 232 (475)
T ss_pred Hhccc--ccc-ccccCCCCCeeECCCCCCCCChhhCc-hhhhCcc----hHHHHHHHHHhhcccCEeeeccHHHHHHHHH
Confidence 42111 000 0111 00122357888 457777776 3322211 1233444455667899999999999998755
Q ss_pred hh-------cCCcceeccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhCCCC
Q 012314 228 TT-------FPELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRP 300 (466)
Q Consensus 228 ~~-------~p~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~ 300 (466)
.. .|++++|||++........ ......+.+|.+|++.++++++|||||||....+.+++.+++.+++.++++
T Consensus 233 ~~l~~~~~~~p~v~~vGpl~~~~~~~~~-~~~~~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~ela~~l~~~~~~ 311 (475)
T PLN02167 233 DYFSRLPENYPPVYPVGPILSLKDRTSP-NLDSSDRDRIMRWLDDQPESSVVFLCFGSLGSLPAPQIKEIAQALELVGCR 311 (475)
T ss_pred HHHHhhcccCCeeEEeccccccccccCC-CCCcchhHHHHHHHhcCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCc
Confidence 53 2689999999864321100 000122357999999988889999999999888999999999999999999
Q ss_pred EEEEEcCCCC--CCCCCCCchhHHHHhcCCceeecccchhhhhcCCCcccceeccCCchhhhhhhcCcceeecccccchh
Q 012314 301 FLWVVRPDIT--TDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQF 378 (466)
Q Consensus 301 ~i~~~~~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~ 378 (466)
|||+++.... ......+|+++.++..+++++++|+||.+||+|++|++|||||||||++||+++|||||++|+++||+
T Consensus 312 flw~~~~~~~~~~~~~~~lp~~~~er~~~rg~v~~w~PQ~~iL~h~~vg~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~ 391 (475)
T PLN02167 312 FLWSIRTNPAEYASPYEPLPEGFMDRVMGRGLVCGWAPQVEILAHKAIGGFVSHCGWNSVLESLWFGVPIATWPMYAEQQ 391 (475)
T ss_pred EEEEEecCcccccchhhhCChHHHHHhccCeeeeccCCHHHHhcCcccCeEEeeCCcccHHHHHHcCCCEEeccccccch
Confidence 9999975311 01123478899988888899999999999999999999999999999999999999999999999999
Q ss_pred hhHHH-HHHhhhceeEeecC---C-CCCcCHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Q 012314 379 LNERY-ICDFWKVGLKFDRD---E-GGIITREEIKNKVDQVLGNQ-DFKARALELKEKAMSSVREGGSSYKTFQNFLQWV 452 (466)
Q Consensus 379 ~~a~r-v~~~~G~G~~l~~~---~-~~~~~~~~l~~~i~~ll~~~-~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~ 452 (466)
.||++ +++ +|+|+.+... + ...++.++|+++|+++|.++ +||+||+++++++++++++||+|.+++++||+.+
T Consensus 392 ~na~~~~~~-~g~g~~~~~~~~~~~~~~~~~~~l~~av~~~m~~~~~~r~~a~~~~~~~~~av~~gGsS~~~l~~~v~~i 470 (475)
T PLN02167 392 LNAFTMVKE-LGLAVELRLDYVSAYGEIVKADEIAGAVRSLMDGEDVPRKKVKEIAEAARKAVMDGGSSFVAVKRFIDDL 470 (475)
T ss_pred hhHHHHHHH-hCeeEEeecccccccCCcccHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 99987 555 7999998641 0 13579999999999999755 8999999999999999999999999999999988
Q ss_pred HHh
Q 012314 453 KTN 455 (466)
Q Consensus 453 ~~~ 455 (466)
...
T Consensus 471 ~~~ 473 (475)
T PLN02167 471 LGD 473 (475)
T ss_pred Hhc
Confidence 764
|
|
| >PLN02448 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-62 Score=476.93 Aligned_cols=430 Identities=27% Similarity=0.484 Sum_probs=332.2
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhC--CCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCC-CCccHH
Q 012314 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKH--GFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWE-DRNDLG 79 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~la~~L~~r--Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 79 (466)
+.||+++|++++||++|++.||++|+.| ||+|||++++.+...+.+.. ...+++|+.+|++.+... ...+..
T Consensus 10 ~~hVvlvp~pa~GHi~P~l~LA~~L~~~~~G~~VT~~~t~~~~~~i~~~~-----~~~gi~fv~lp~~~p~~~~~~~~~~ 84 (459)
T PLN02448 10 SCHVVAMPYPGRGHINPMMNLCKLLASRKPDILITFVVTEEWLGLIGSDP-----KPDNIRFATIPNVIPSELVRAADFP 84 (459)
T ss_pred CcEEEEECCcccccHHHHHHHHHHHHcCCCCcEEEEEeCCchHhHhhccC-----CCCCEEEEECCCCCCCccccccCHH
Confidence 5799999999999999999999999999 99999999998887776532 123699999997655442 223455
Q ss_pred HHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEEeccchhHHHHHHhhcccccccCccCC
Q 012314 80 KLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDS 159 (466)
Q Consensus 80 ~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~ 159 (466)
.++..+.+.+.+.++++++.+. .++||||+|.+..|+..+|+++|||++.++++++.....+.+++.....+..+.
T Consensus 85 ~~~~~~~~~~~~~~~~~l~~~~----~~~~~VI~D~~~~wa~~vA~~lgIP~v~f~~~~a~~~~~~~~~~~~~~~~~~~~ 160 (459)
T PLN02448 85 GFLEAVMTKMEAPFEQLLDRLE----PPVTAIVADTYLFWAVGVGNRRNIPVASLWTMSATFFSVFYHFDLLPQNGHFPV 160 (459)
T ss_pred HHHHHHHHHhHHHHHHHHHhcC----CCcEEEEECCccHHHHHHHHHhCCCeEEEEhHHHHHHHHHHHhhhhhhccCCCC
Confidence 5666665567778888887753 368999999999999999999999999999999987777766553322111110
Q ss_pred CCCCC-ccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHHHhh-----cCCc
Q 012314 160 HGTPM-SMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTT-----FPEL 233 (466)
Q Consensus 160 ~~~~~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~~~~-----~p~v 233 (466)
. .+. .......+|+++.+...+++ .++... .....+.+........+++.+++||+.+||+..... .+++
T Consensus 161 ~-~~~~~~~~~~~iPg~~~l~~~dlp-~~~~~~--~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~~~~~~~ 236 (459)
T PLN02448 161 E-LSESGEERVDYIPGLSSTRLSDLP-PIFHGN--SRRVLKRILEAFSWVPKAQYLLFTSFYELEAQAIDALKSKFPFPV 236 (459)
T ss_pred c-cccccCCccccCCCCCCCChHHCc-hhhcCC--chHHHHHHHHHHhhcccCCEEEEccHHHhhHHHHHHHHhhcCCce
Confidence 0 000 11222357888877777777 443321 222233444445556778899999999999874443 2478
Q ss_pred ceeccccCCCCCC-CCCC-CcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCC
Q 012314 234 LPIGPLLASNRLG-NTAG-YFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITT 311 (466)
Q Consensus 234 ~~VGpl~~~~~~~-~~~~-~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~ 311 (466)
+.|||+....... .... ...+.+.++.+|++.++++++|||||||....+.+++++++.+|+.++++|||++...
T Consensus 237 ~~iGP~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvsfGs~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~--- 313 (459)
T PLN02448 237 YPIGPSIPYMELKDNSSSSNNEDNEPDYFQWLDSQPEGSVLYVSLGSFLSVSSAQMDEIAAGLRDSGVRFLWVARGE--- 313 (459)
T ss_pred EEecCcccccccCCCccccccccchhHHHHHHcCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCEEEEEcCc---
Confidence 9999997532110 0000 0011234788999998888999999999977888999999999999999999987633
Q ss_pred CCCCCCchhHHHHhcCCceeecccchhhhhcCCCcccceeccCCchhhhhhhcCcceeecccccchhhhHHHHHHhhhce
Q 012314 312 DANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVG 391 (466)
Q Consensus 312 ~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G 391 (466)
..++.+..++|+++++|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||+++++.||+|
T Consensus 314 ------~~~~~~~~~~~~~v~~w~pQ~~iL~h~~v~~fvtHgG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G 387 (459)
T PLN02448 314 ------ASRLKEICGDMGLVVPWCDQLKVLCHSSVGGFWTHCGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIG 387 (459)
T ss_pred ------hhhHhHhccCCEEEeccCCHHHHhccCccceEEecCchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCce
Confidence 12344445578989999999999999999999999999999999999999999999999999999999856999
Q ss_pred eEeecC--CCCCcCHHHHHHHHHHHhcCH-----HHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Q 012314 392 LKFDRD--EGGIITREEIKNKVDQVLGNQ-----DFKARALELKEKAMSSVREGGSSYKTFQNFLQWVKT 454 (466)
Q Consensus 392 ~~l~~~--~~~~~~~~~l~~~i~~ll~~~-----~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~ 454 (466)
+.+... +...++.++|+++|+++|.++ ++|+||+++++++++++.+||+|.+++++||+++..
T Consensus 388 ~~~~~~~~~~~~~~~~~l~~av~~vl~~~~~~~~~~r~~a~~~~~~~~~a~~~gGss~~~l~~~v~~~~~ 457 (459)
T PLN02448 388 WRVKREVGEETLVGREEIAELVKRFMDLESEEGKEMRRRAKELQEICRGAIAKGGSSDTNLDAFIRDISQ 457 (459)
T ss_pred EEEecccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhc
Confidence 998631 124679999999999999753 799999999999999999999999999999998874
|
|
| >PLN03007 UDP-glucosyltransferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-61 Score=474.42 Aligned_cols=438 Identities=29% Similarity=0.503 Sum_probs=315.9
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCC----CCeEEEecC---CCCCCCCCC
Q 012314 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLG----EQIHLVSIP---DGMEPWEDR 75 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~---~~~~~~~~~ 75 (466)
+.||+++|++++||++|++.||++|+.|||+|||++++.+...+.+.+....... ..+.++.+| +++++....
T Consensus 5 ~~hVvlvp~pa~GHi~P~L~LAk~L~~rG~~VT~vtt~~~~~~i~~~~a~~~~~~~~~~~~~~~~~~p~~~~glP~g~e~ 84 (482)
T PLN03007 5 KLHILFFPFMAHGHMIPTLDMAKLFSSRGAKSTILTTPLNAKIFEKPIEAFKNLNPGLEIDIQIFNFPCVELGLPEGCEN 84 (482)
T ss_pred CcEEEEECCCccccHHHHHHHHHHHHhCCCEEEEEECCCchhhhhhhhhhhcccCCCCcceEEEeeCCCCcCCCCCCccc
Confidence 5699999999999999999999999999999999999998877765543221111 144555555 345543111
Q ss_pred c---------cHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEEeccchhHHHHHHh
Q 012314 76 N---------DLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVF 146 (466)
Q Consensus 76 ~---------~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~ 146 (466)
. ....++..+... .+.+.+.++++-++ .++||||+|.+..|+..+|+++|||++.|++++++....+.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~l~~~l~~--~~~~~IV~D~~~~w~~~vA~~lgIP~v~f~~~~a~~~~~~~ 161 (482)
T PLN03007 85 VDFITSNNNDDSGDLFLKFLFS-TKYFKDQLEKLLET--TRPDCLVADMFFPWATEAAEKFGVPRLVFHGTGYFSLCASY 161 (482)
T ss_pred ccccccccccchHHHHHHHHHH-HHHHHHHHHHHHhc--CCCCEEEECCcchhHHHHHHHhCCCeEEeecccHHHHHHHH
Confidence 1 122333334322 22233333322211 57999999999999999999999999999998887766554
Q ss_pred hcccccccCccCCCCCCCccccccccCCCCC---CCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhcc
Q 012314 147 RIPKLIDDGIIDSHGTPMSMQMFRIAPKMPE---MNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELE 223 (466)
Q Consensus 147 ~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le 223 (466)
++....+... .+... ....+|+++. +...+++ . ......+..++....+...+++.+++||+++||
T Consensus 162 ~~~~~~~~~~-----~~~~~-~~~~~pg~p~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~vl~Nt~~~le 230 (482)
T PLN03007 162 CIRVHKPQKK-----VASSS-EPFVIPDLPGDIVITEEQIN-D----ADEESPMGKFMKEVRESEVKSFGVLVNSFYELE 230 (482)
T ss_pred HHHhcccccc-----cCCCC-ceeeCCCCCCccccCHHhcC-C----CCCchhHHHHHHHHHhhcccCCEEEEECHHHHH
Confidence 3321111000 11101 1123566652 2222333 1 111123444444555566788999999999999
Q ss_pred HHHHhhc-----CCcceeccccCCCCCC--CC--CCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHH
Q 012314 224 SEAFTTF-----PELLPIGPLLASNRLG--NT--AGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGL 294 (466)
Q Consensus 224 ~~~~~~~-----p~v~~VGpl~~~~~~~--~~--~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~ 294 (466)
....+.+ ..+++|||+....... .. ....+..+.+|.+|+++++++++|||||||....+.+++.+++.++
T Consensus 231 ~~~~~~~~~~~~~~~~~VGPl~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~~~~l 310 (482)
T PLN03007 231 SAYADFYKSFVAKRAWHIGPLSLYNRGFEEKAERGKKANIDEQECLKWLDSKKPDSVIYLSFGSVASFKNEQLFEIAAGL 310 (482)
T ss_pred HHHHHHHHhccCCCEEEEccccccccccccccccCCccccchhHHHHHHhcCCCCceEEEeecCCcCCCHHHHHHHHHHH
Confidence 8756654 3689999986532210 00 0001112467899999988899999999999888889999999999
Q ss_pred HhCCCCEEEEEcCCCCC-CCCCCCchhHHHHhc-CCceeecccchhhhhcCCCcccceeccCCchhhhhhhcCcceeecc
Q 012314 295 ELCKRPFLWVVRPDITT-DANDRYPEGFQERVA-ARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWP 372 (466)
Q Consensus 295 ~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~-~n~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P 372 (466)
+.++++|||+++..... .....+|+++.++.. .|+++.+|+||.+||+|+++++|||||||||++||+++|||||++|
T Consensus 311 ~~~~~~flw~~~~~~~~~~~~~~lp~~~~~r~~~~g~~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GVP~v~~P 390 (482)
T PLN03007 311 EGSGQNFIWVVRKNENQGEKEEWLPEGFEERTKGKGLIIRGWAPQVLILDHQATGGFVTHCGWNSLLEGVAAGLPMVTWP 390 (482)
T ss_pred HHCCCCEEEEEecCCcccchhhcCCHHHHHHhccCCEEEecCCCHHHHhccCccceeeecCcchHHHHHHHcCCCeeecc
Confidence 99999999999864211 112357888887764 5666679999999999999999999999999999999999999999
Q ss_pred cccchhhhHHHHHHhhhceeEeecC-----CCCCcCHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHHhcCCCcHHH
Q 012314 373 YFGDQFLNERYICDFWKVGLKFDRD-----EGGIITREEIKNKVDQVLGNQ---DFKARALELKEKAMSSVREGGSSYKT 444 (466)
Q Consensus 373 ~~~DQ~~~a~rv~~~~G~G~~l~~~-----~~~~~~~~~l~~~i~~ll~~~---~~r~~a~~~~~~~~~~~~~~g~~~~~ 444 (466)
+++||+.||+++++.+++|+.+... +.+.++.++|+++|+++|.++ +||+||+++++.+++++++||+|.++
T Consensus 391 ~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~l~~av~~~m~~~~~~~~r~~a~~~~~~a~~a~~~gGsS~~~ 470 (482)
T PLN03007 391 VGAEQFYNEKLVTQVLRTGVSVGAKKLVKVKGDFISREKVEKAVREVIVGEEAEERRLRAKKLAEMAKAAVEEGGSSFND 470 (482)
T ss_pred chhhhhhhHHHHHHhhcceeEeccccccccccCcccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhCCCcHHHH
Confidence 9999999999987545666665311 135689999999999999887 89999999999999999999999999
Q ss_pred HHHHHHHHHH
Q 012314 445 FQNFLQWVKT 454 (466)
Q Consensus 445 ~~~~v~~~~~ 454 (466)
+++||+.+..
T Consensus 471 l~~~v~~~~~ 480 (482)
T PLN03007 471 LNKFMEELNS 480 (482)
T ss_pred HHHHHHHHHh
Confidence 9999999875
|
|
| >PLN02670 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-61 Score=465.61 Aligned_cols=434 Identities=28% Similarity=0.458 Sum_probs=322.9
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecC----CCCCCCCC-Ccc
Q 012314 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIP----DGMEPWED-RND 77 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~-~~~ 77 (466)
+.||+++|++++||++||+.||+.|+.||+.|||++++.+...+..... .....++++.+| ++++++.. ..+
T Consensus 6 ~~HVvl~P~paqGHi~P~l~LAk~La~~G~~vT~v~t~~n~~~~~~~~~---~~~~~i~~~~lp~p~~dglp~~~~~~~~ 82 (472)
T PLN02670 6 VLHVAMFPWLAMGHLIPFLRLSKLLAQKGHKISFISTPRNLHRLPKIPS---QLSSSITLVSFPLPSVPGLPSSAESSTD 82 (472)
T ss_pred CcEEEEeCChhhhHHHHHHHHHHHHHhCCCEEEEEeCCchHHhhhhccc---cCCCCeeEEECCCCccCCCCCCcccccc
Confidence 4699999999999999999999999999999999999987766543211 112358999988 56664421 122
Q ss_pred H----HHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEEeccchhHHHHHHhhcccccc
Q 012314 78 L----GKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLID 153 (466)
Q Consensus 78 ~----~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~ 153 (466)
. ..++....+.+.+.++++++. .+++|||+|.+..|+..+|+++|||++.++++++.....+.+......
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~l~~------~~~~cvI~D~f~~wa~~vA~~~gIP~~~f~~~~a~~~~~~~~~~~~~~ 156 (472)
T PLN02670 83 VPYTKQQLLKKAFDLLEPPLTTFLET------SKPDWIIYDYASHWLPSIAAELGISKAFFSLFTAATLSFIGPPSSLME 156 (472)
T ss_pred cchhhHHHHHHHHHHhHHHHHHHHHh------CCCcEEEECCcchhHHHHHHHcCCCEEEEehhhHHHHHHHhhhHhhhh
Confidence 2 123444455667777777766 568999999999999999999999999999999887777654432222
Q ss_pred cCccCCCCCCCccccccccCCC----C--CCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHHH
Q 012314 154 DGIIDSHGTPMSMQMFRIAPKM----P--EMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAF 227 (466)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~p~~----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~~ 227 (466)
.+... ........+|++ + .++..+++ .++............+.+....+.+++.+++||+.+||+...
T Consensus 157 ~~~~~-----~~~~~~~~~p~~~P~~~~~~~~~~dlp-~~~~~~~~~~~~~~~~~~~~~~~~~~~gvlvNTf~eLE~~~l 230 (472)
T PLN02670 157 GGDLR-----STAEDFTVVPPWVPFESNIVFRYHEVT-KYVEKTEEDETGPSDSVRFGFAIGGSDVVIIRSSPEFEPEWF 230 (472)
T ss_pred cccCC-----CccccccCCCCcCCCCccccccHHHhh-HHHhccCccchHHHHHHHHHhhcccCCEEEEeCHHHHhHHHH
Confidence 11111 001111113332 2 23445666 333221111111222334444567899999999999998766
Q ss_pred hhc-----CCcceeccccCCC-CCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhCCCCE
Q 012314 228 TTF-----PELLPIGPLLASN-RLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRPF 301 (466)
Q Consensus 228 ~~~-----p~v~~VGpl~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~ 301 (466)
... ++++.|||+.... ....+.....+..++|.+|+|+++++++|||||||....+.+++++++.+|+.++++|
T Consensus 231 ~~l~~~~~~~v~~VGPl~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gl~~s~~~F 310 (472)
T PLN02670 231 DLLSDLYRKPIIPIGFLPPVIEDDEEDDTIDVKGWVRIKEWLDKQRVNSVVYVALGTEASLRREEVTELALGLEKSETPF 310 (472)
T ss_pred HHHHHhhCCCeEEEecCCccccccccccccccchhHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHHCCCCE
Confidence 543 5799999997531 1110000000112568999999988899999999999999999999999999999999
Q ss_pred EEEEcCCCC--CCCCCCCchhHHHHhcCCceee-cccchhhhhcCCCcccceeccCCchhhhhhhcCcceeecccccchh
Q 012314 302 LWVVRPDIT--TDANDRYPEGFQERVAARGQMI-SWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQF 378 (466)
Q Consensus 302 i~~~~~~~~--~~~~~~~~~~~~~~~~~n~~~~-~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~ 378 (466)
||++..... ......+|+++.++..+++.++ +|+||.+||+|+++++|||||||||++||+++|||+|++|+++||+
T Consensus 311 lWv~r~~~~~~~~~~~~lp~~f~~~~~~rG~vv~~W~PQ~~IL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ~ 390 (472)
T PLN02670 311 FWVLRNEPGTTQNALEMLPDGFEERVKGRGMIHVGWVPQVKILSHESVGGFLTHCGWNSVVEGLGFGRVLILFPVLNEQG 390 (472)
T ss_pred EEEEcCCcccccchhhcCChHHHHhccCCCeEEeCcCCHHHHhcCcccceeeecCCcchHHHHHHcCCCEEeCcchhccH
Confidence 999985311 1112358899998887777765 9999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHhhhceeEeecCC-CCCcCHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Q 012314 379 LNERYICDFWKVGLKFDRDE-GGIITREEIKNKVDQVLGNQ---DFKARALELKEKAMSSVREGGSSYKTFQNFLQWVKT 454 (466)
Q Consensus 379 ~~a~rv~~~~G~G~~l~~~~-~~~~~~~~l~~~i~~ll~~~---~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~ 454 (466)
.||+++++ +|+|+.+...+ ...++.++|+++|+++|.++ +||+||+++++++++ .+...+.++.+++++..
T Consensus 391 ~Na~~v~~-~g~Gv~l~~~~~~~~~~~e~i~~av~~vm~~~~g~~~r~~a~~l~~~~~~----~~~~~~~~~~~~~~l~~ 465 (472)
T PLN02670 391 LNTRLLHG-KKLGLEVPRDERDGSFTSDSVAESVRLAMVDDAGEEIRDKAKEMRNLFGD----MDRNNRYVDELVHYLRE 465 (472)
T ss_pred HHHHHHHH-cCeeEEeeccccCCcCcHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHhC----cchhHHHHHHHHHHHHH
Confidence 99999998 69999996421 23589999999999999776 799999999999997 67778899999998888
Q ss_pred hc
Q 012314 455 NA 456 (466)
Q Consensus 455 ~~ 456 (466)
+.
T Consensus 466 ~~ 467 (472)
T PLN02670 466 NR 467 (472)
T ss_pred hc
Confidence 75
|
|
| >PLN02764 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-61 Score=458.84 Aligned_cols=421 Identities=27% Similarity=0.452 Sum_probs=317.3
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecC--CCCCCC-CCCccH-
Q 012314 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIP--DGMEPW-EDRNDL- 78 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~- 78 (466)
+.||+++|++++||++|++.||+.|+.+|+.|||++++.+...+... ........+.+..+| +++++. +...+.
T Consensus 5 ~~Hvvl~P~paqGHi~P~l~LAk~La~~g~~vT~~tt~~~~~~~~~~--~~~~~~~~v~~~~~p~~~glp~g~e~~~~~~ 82 (453)
T PLN02764 5 KFHVLMYPWFATGHMTPFLFLANKLAEKGHTVTFLLPKKALKQLEHL--NLFPHNIVFRSVTVPHVDGLPVGTETVSEIP 82 (453)
T ss_pred CcEEEEECCcccccHHHHHHHHHHHHhCCCEEEEEeCcchhhhhccc--ccCCCCceEEEEECCCcCCCCCcccccccCC
Confidence 57999999999999999999999999999999999999876555431 100111237777777 566654 211111
Q ss_pred ---HHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEEeccchhHHHHHHhhcccccccC
Q 012314 79 ---GKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDG 155 (466)
Q Consensus 79 ---~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~ 155 (466)
...+....+.+.+.++++++. .++||||+|. ..|+..+|+++|||++.|+++++.....+.+ +. +
T Consensus 83 ~~~~~~~~~a~~~~~~~~~~~l~~------~~~~~iV~D~-~~w~~~vA~~~gIP~~~f~~~~a~~~~~~~~-~~----~ 150 (453)
T PLN02764 83 VTSADLLMSAMDLTRDQVEVVVRA------VEPDLIFFDF-AHWIPEVARDFGLKTVKYVVVSASTIASMLV-PG----G 150 (453)
T ss_pred hhHHHHHHHHHHHhHHHHHHHHHh------CCCCEEEECC-chhHHHHHHHhCCCEEEEEcHHHHHHHHHhc-cc----c
Confidence 112222233456777777776 5689999995 7899999999999999999999987777642 11 1
Q ss_pred ccCCCCCCCccccccccCCCCC----CCcccccccccCC-C-CchhHHHHHHHHHHhhhccccEEEEcChhhccHHHHhh
Q 012314 156 IIDSHGTPMSMQMFRIAPKMPE----MNSRDCFWAHIGD-W-TSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTT 229 (466)
Q Consensus 156 ~~~~~~~~~~~~~~~~~p~~~~----~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~~~~ 229 (466)
.. . ..+|++|. ++..+++ .+... . ........++.+..+....++.+++||+.+||+.....
T Consensus 151 ~~-----~------~~~pglp~~~v~l~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~vlvNTf~eLE~~~~~~ 218 (453)
T PLN02764 151 EL-----G------VPPPGYPSSKVLLRKQDAY-TMKNLEPTNTIDVGPNLLERVTTSLMNSDVIAIRTAREIEGNFCDY 218 (453)
T ss_pred cC-----C------CCCCCCCCCcccCcHhhCc-chhhcCCCccchhHHHHHHHHHHhhccCCEEEEeccHHhhHHHHHH
Confidence 00 0 01255542 4444444 22111 1 11112334444443556788999999999999876654
Q ss_pred c-----CCcceeccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhCCCCEEEE
Q 012314 230 F-----PELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWV 304 (466)
Q Consensus 230 ~-----p~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~ 304 (466)
. ++++.|||++...... ...+.+|.+|||.++++++|||||||....+.+++.+++.+|+..+.+|+|+
T Consensus 219 ~~~~~~~~v~~VGPL~~~~~~~------~~~~~~cl~WLD~q~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~pflwv 292 (453)
T PLN02764 219 IEKHCRKKVLLTGPVFPEPDKT------RELEERWVKWLSGYEPDSVVFCALGSQVILEKDQFQELCLGMELTGSPFLVA 292 (453)
T ss_pred HHhhcCCcEEEeccCccCcccc------ccchhHHHHHHhCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCeEEE
Confidence 4 5799999997643111 1234679999999999999999999998889999999999999999999999
Q ss_pred EcCCCCC-CCCCCCchhHHHHhcCCceee-cccchhhhhcCCCcccceeccCCchhhhhhhcCcceeecccccchhhhHH
Q 012314 305 VRPDITT-DANDRYPEGFQERVAARGQMI-SWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNER 382 (466)
Q Consensus 305 ~~~~~~~-~~~~~~~~~~~~~~~~n~~~~-~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~ 382 (466)
+...... .....+|++|+++..+++.++ +|+||.+||+|++|++|||||||||++||+++|||+|++|+++||+.||+
T Consensus 293 ~r~~~~~~~~~~~lp~~f~~r~~grG~v~~~W~PQ~~vL~h~~v~~FvtH~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~ 372 (453)
T PLN02764 293 VKPPRGSSTIQEALPEGFEERVKGRGVVWGGWVQQPLILSHPSVGCFVSHCGFGSMWESLLSDCQIVLVPQLGDQVLNTR 372 (453)
T ss_pred EeCCCCCcchhhhCCcchHhhhccCCcEEeCCCCHHHHhcCcccCeEEecCCchHHHHHHHcCCCEEeCCcccchHHHHH
Confidence 9853110 112468999999887777666 99999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCH-----HHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhcc
Q 012314 383 YICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQ-----DFKARALELKEKAMSSVREGGSSYKTFQNFLQWVKTNAL 457 (466)
Q Consensus 383 rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~-----~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~~~ 457 (466)
++++.+|+|+.+..++...++.++|.++|+++|+++ ++|++++++++++++ +|+|.+++++||+++.....
T Consensus 373 ~l~~~~g~gv~~~~~~~~~~~~e~i~~av~~vm~~~~~~g~~~r~~a~~~~~~~~~----~GSS~~~l~~lv~~~~~~~~ 448 (453)
T PLN02764 373 LLSDELKVSVEVAREETGWFSKESLRDAINSVMKRDSEIGNLVKKNHTKWRETLAS----PGLLTGYVDNFIESLQDLVS 448 (453)
T ss_pred HHHHHhceEEEeccccCCccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHh----cCCHHHHHHHHHHHHHHhcc
Confidence 997546999988542113689999999999999763 499999999999975 89999999999999998854
Q ss_pred cC
Q 012314 458 AH 459 (466)
Q Consensus 458 ~~ 459 (466)
.+
T Consensus 449 ~~ 450 (453)
T PLN02764 449 GT 450 (453)
T ss_pred cc
Confidence 43
|
|
| >PLN02534 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-60 Score=463.47 Aligned_cols=440 Identities=28% Similarity=0.516 Sum_probs=321.3
Q ss_pred CCC-CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecC-----CCCCCCCC
Q 012314 1 MSR-PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIP-----DGMEPWED 74 (466)
Q Consensus 1 m~~-~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 74 (466)
|.+ .||+++|++++||++|++.||+.|+.+|+.|||++++.+...+.............++++.+| +++++...
T Consensus 5 ~~~~~Hvv~vPfpaqGHi~P~l~LAk~La~~G~~vT~v~t~~n~~~~~~~~~~~~~~~~~i~~~~lp~p~~~dglp~~~~ 84 (491)
T PLN02534 5 KAKQLHFVLIPLMAQGHMIPMIDMARLLAERGVIVSLVTTPQNASRFAKTIDRARESGLPIRLVQIPFPCKEVGLPIGCE 84 (491)
T ss_pred cCCCCEEEEECCCCcchHHHHHHHHHHHHhCCCeEEEEECCCcHHHHhhhhhhccccCCCeEEEEcCCCCccCCCCCCcc
Confidence 443 699999999999999999999999999999999999988766654332111111248999988 56665421
Q ss_pred -CccH--HHHHHHH---HHhccHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEEeccchhHHHHHHhhc
Q 012314 75 -RNDL--GKLIEKC---LQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRI 148 (466)
Q Consensus 75 -~~~~--~~~~~~~---~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~ 148 (466)
..+. ..+...+ ...+.+.++++++.. . .++||||+|.+..|+..+|+.+|||++.|++++++....+.++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~l~~~l~~lL~~~---~-~pp~cIV~D~f~~Wa~dVA~~lgIP~v~F~t~~a~~~~~~~~~ 160 (491)
T PLN02534 85 NLDTLPSRDLLRKFYDAVDKLQQPLERFLEQA---K-PPPSCIISDKCLSWTSKTAQRFNIPRIVFHGMCCFSLLSSHNI 160 (491)
T ss_pred ccccCCcHHHHHHHHHHHHHhHHHHHHHHHhc---C-CCCcEEEECCccHHHHHHHHHhCCCeEEEecchHHHHHHHHHH
Confidence 1111 1223222 234556667776642 1 5689999999999999999999999999999988877665432
Q ss_pred ccccccCccCCCCCCCccccccccCCCCC---CCcccccccccCCCCchhHHHHHHHHHHhh-hccccEEEEcChhhccH
Q 012314 149 PKLIDDGIIDSHGTPMSMQMFRIAPKMPE---MNSRDCFWAHIGDWTSQKIFFDLLERNTRA-MIAVNFHFCNSTYELES 224 (466)
Q Consensus 149 p~~~~~~~~~~~~~~~~~~~~~~~p~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~vl~~s~~~le~ 224 (466)
....+.. . .+. ......+|+++. ++..+++ .++..... ...+ ...... ...++.+++||+.+||+
T Consensus 161 ~~~~~~~--~---~~~-~~~~~~iPg~p~~~~l~~~dlp-~~~~~~~~---~~~~-~~~~~~~~~~a~~vlvNTf~eLE~ 229 (491)
T PLN02534 161 RLHNAHL--S---VSS-DSEPFVVPGMPQSIEITRAQLP-GAFVSLPD---LDDV-RNKMREAESTAFGVVVNSFNELEH 229 (491)
T ss_pred HHhcccc--c---CCC-CCceeecCCCCccccccHHHCC-hhhcCccc---HHHH-HHHHHhhcccCCEEEEecHHHhhH
Confidence 2111110 0 111 112345777763 5666666 32221111 1222 222222 24577999999999998
Q ss_pred HHHhhc-----CCcceeccccCCCCCCCC---CCCccc-CCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHH
Q 012314 225 EAFTTF-----PELLPIGPLLASNRLGNT---AGYFWC-EDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLE 295 (466)
Q Consensus 225 ~~~~~~-----p~v~~VGpl~~~~~~~~~---~~~~~~-~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~ 295 (466)
.....+ ++++.|||++........ .+.... .+.+|..|||.++++++|||||||......+++.+++.+|+
T Consensus 230 ~~l~~l~~~~~~~v~~VGPL~~~~~~~~~~~~~~~~~~~~~~~cl~wLd~~~~~sVvyvsfGS~~~~~~~q~~e~a~gl~ 309 (491)
T PLN02534 230 GCAEAYEKAIKKKVWCVGPVSLCNKRNLDKFERGNKASIDETQCLEWLDSMKPRSVIYACLGSLCRLVPSQLIELGLGLE 309 (491)
T ss_pred HHHHHHHhhcCCcEEEECcccccccccccccccCCccccchHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHH
Confidence 655432 579999999753211000 000111 23469999999988899999999998889999999999999
Q ss_pred hCCCCEEEEEcCCCCC-C-CCCCCchhHHHHhc-CCceeecccchhhhhcCCCcccceeccCCchhhhhhhcCcceeecc
Q 012314 296 LCKRPFLWVVRPDITT-D-ANDRYPEGFQERVA-ARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWP 372 (466)
Q Consensus 296 ~~~~~~i~~~~~~~~~-~-~~~~~~~~~~~~~~-~n~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P 372 (466)
.++.+|||++...... . ....+|++|.++.. .++++.+|+||..||.|+++++|||||||||++||+++|||+|++|
T Consensus 310 ~~~~~flW~~r~~~~~~~~~~~~~p~gf~~~~~~~g~~v~~w~pq~~iL~h~~v~~fvtH~G~ns~~ea~~~GvP~v~~P 389 (491)
T PLN02534 310 ASKKPFIWVIKTGEKHSELEEWLVKENFEERIKGRGLLIKGWAPQVLILSHPAIGGFLTHCGWNSTIEGICSGVPMITWP 389 (491)
T ss_pred hCCCCEEEEEecCccccchhhhcCchhhHHhhccCCeeccCCCCHHHHhcCCccceEEecCccHHHHHHHHcCCCEEecc
Confidence 9999999999843110 0 11135788887754 5555669999999999999999999999999999999999999999
Q ss_pred cccchhhhHHHHHHhhhceeEeecC------CC---C-CcCHHHHHHHHHHHhc-----CHHHHHHHHHHHHHHHHHHhc
Q 012314 373 YFGDQFLNERYICDFWKVGLKFDRD------EG---G-IITREEIKNKVDQVLG-----NQDFKARALELKEKAMSSVRE 437 (466)
Q Consensus 373 ~~~DQ~~~a~rv~~~~G~G~~l~~~------~~---~-~~~~~~l~~~i~~ll~-----~~~~r~~a~~~~~~~~~~~~~ 437 (466)
+++||+.||+++++.||+|+.+..+ +. + .++.++|+++|+++|. ..++|+||+++++++++++.+
T Consensus 390 ~~~dq~~na~~~~e~~~vGv~~~~~~~~~~~~~~~~~~~v~~eev~~~v~~~m~~~~eeg~~~R~rA~elk~~a~~Av~~ 469 (491)
T PLN02534 390 LFAEQFLNEKLIVEVLRIGVRVGVEVPVRWGDEERVGVLVKKDEVEKAVKTLMDDGGEEGERRRRRAQELGVMARKAMEL 469 (491)
T ss_pred ccccHHHHHHHHHHhhcceEEecccccccccccccccCccCHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999998778999988421 01 1 4899999999999995 248999999999999999999
Q ss_pred CCCcHHHHHHHHHHHHHh
Q 012314 438 GGSSYKTFQNFLQWVKTN 455 (466)
Q Consensus 438 ~g~~~~~~~~~v~~~~~~ 455 (466)
||+|.+++++||+.+...
T Consensus 470 GGSS~~nl~~fv~~i~~~ 487 (491)
T PLN02534 470 GGSSHINLSILIQDVLKQ 487 (491)
T ss_pred CCcHHHHHHHHHHHHHHH
Confidence 999999999999998754
|
|
| >PLN02208 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-60 Score=460.85 Aligned_cols=413 Identities=26% Similarity=0.431 Sum_probs=305.5
Q ss_pred CCC-CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEec--C--CCCCCCCC-
Q 012314 1 MSR-PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSI--P--DGMEPWED- 74 (466)
Q Consensus 1 m~~-~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~- 74 (466)
|++ .||+++|+++.||++|++.||+.|+.+||+|||++++.+...+.+.+ ....++++..+ | ++++....
T Consensus 1 ~~~~~hvv~~P~paqGHi~P~l~LAk~La~~G~~VT~vtt~~~~~~i~~~~----a~~~~i~~~~l~~p~~dgLp~g~~~ 76 (442)
T PLN02208 1 MEPKFHAFMFPWFAFGHMIPFLHLANKLAEKGHRVTFLLPKKAQKQLEHHN----LFPDSIVFHPLTIPPVNGLPAGAET 76 (442)
T ss_pred CCCCCEEEEecCccccHHHHHHHHHHHHHhCCCEEEEEeccchhhhhhccc----CCCCceEEEEeCCCCccCCCCCccc
Confidence 554 59999999999999999999999999999999999987766665432 11224566554 3 45554422
Q ss_pred CccHHHHHHHH----HHhccHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEEeccchhHHHHHHhhccc
Q 012314 75 RNDLGKLIEKC----LQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPK 150 (466)
Q Consensus 75 ~~~~~~~~~~~----~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~ 150 (466)
..+....+..+ .+...+.++++++. .++||||+| +..|+..+|+.+|||++.|+++++.... +.+++.
T Consensus 77 ~~~l~~~l~~~~~~~~~~~~~~l~~~L~~------~~~~cVV~D-~~~wa~~vA~e~giP~~~f~~~~a~~~~-~~~~~~ 148 (442)
T PLN02208 77 TSDIPISMDNLLSEALDLTRDQVEAAVRA------LRPDLIFFD-FAQWIPEMAKEHMIKSVSYIIVSATTIA-HTHVPG 148 (442)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHhh------CCCeEEEEC-CcHhHHHHHHHhCCCEEEEEhhhHHHHH-HHccCc
Confidence 21222222222 23344455555554 578999999 5789999999999999999999887654 444331
Q ss_pred ccccCccCCCCCCCccccccccCCCCC----CCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHH
Q 012314 151 LIDDGIIDSHGTPMSMQMFRIAPKMPE----MNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEA 226 (466)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~p~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~ 226 (466)
+... ..+|+++. ++..+++ .+ ......+..+.....+...+++.+++||+.+||+..
T Consensus 149 ----~~~~-----------~~~pglp~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~vl~Ntf~eLE~~~ 209 (442)
T PLN02208 149 ----GKLG-----------VPPPGYPSSKVLFRENDAH-AL---ATLSIFYKRLYHQITTGLKSCDVIALRTCKEIEGKF 209 (442)
T ss_pred ----cccC-----------CCCCCCCCcccccCHHHcC-cc---cccchHHHHHHHHHHhhhccCCEEEEECHHHHHHHH
Confidence 0000 01355553 3344444 22 111122222332333455789999999999999865
Q ss_pred Hhh-----cCCcceeccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhCCCCE
Q 012314 227 FTT-----FPELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRPF 301 (466)
Q Consensus 227 ~~~-----~p~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~ 301 (466)
... .|+++.|||++.+.... .+.+++|.+|+|.++++++|||||||...++.+++.+++.+++..+.++
T Consensus 210 ~~~~~~~~~~~v~~vGpl~~~~~~~------~~~~~~~~~wLd~~~~~sVvyvSfGS~~~l~~~q~~e~~~~l~~s~~pf 283 (442)
T PLN02208 210 CDYISRQYHKKVLLTGPMFPEPDTS------KPLEEQWSHFLSGFPPKSVVFCSLGSQIILEKDQFQELCLGMELTGLPF 283 (442)
T ss_pred HHHHHhhcCCCEEEEeecccCcCCC------CCCHHHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHHHhCCCcE
Confidence 543 37899999998754311 1346789999999988899999999998889999999999888888888
Q ss_pred EEEEcCCCCC-CCCCCCchhHHHHhcC-CceeecccchhhhhcCCCcccceeccCCchhhhhhhcCcceeecccccchhh
Q 012314 302 LWVVRPDITT-DANDRYPEGFQERVAA-RGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFL 379 (466)
Q Consensus 302 i~~~~~~~~~-~~~~~~~~~~~~~~~~-n~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~ 379 (466)
+|++..+.+. .....+|++|+++..+ |+.+.+|+||.+||+|+++++|||||||||++||+++|||+|++|+++||+.
T Consensus 284 ~wv~r~~~~~~~~~~~lp~~f~~r~~~~g~~v~~W~PQ~~iL~H~~v~~FvtHcG~nS~~Eai~~GVP~l~~P~~~DQ~~ 363 (442)
T PLN02208 284 LIAVKPPRGSSTVQEGLPEGFEERVKGRGVVWGGWVQQPLILDHPSIGCFVNHCGPGTIWESLVSDCQMVLIPFLSDQVL 363 (442)
T ss_pred EEEEeCCCcccchhhhCCHHHHHHHhcCCcEeeccCCHHHHhcCCccCeEEccCCchHHHHHHHcCCCEEecCcchhhHH
Confidence 8888743110 1124588899888764 5555599999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCH-----HHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Q 012314 380 NERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQ-----DFKARALELKEKAMSSVREGGSSYKTFQNFLQWVKT 454 (466)
Q Consensus 380 ~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~-----~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~ 454 (466)
||+++++.+|+|+.+..++.+.++.++|.++|+++|+++ ++|++|+++++.+.+ +|+|.+++++||+.+.+
T Consensus 364 na~~~~~~~g~gv~~~~~~~~~~~~~~l~~ai~~~m~~~~e~g~~~r~~~~~~~~~~~~----~gsS~~~l~~~v~~l~~ 439 (442)
T PLN02208 364 FTRLMTEEFEVSVEVSREKTGWFSKESLSNAIKSVMDKDSDLGKLVRSNHTKLKEILVS----PGLLTGYVDKFVEELQE 439 (442)
T ss_pred HHHHHHHHhceeEEeccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHhc----CCcHHHHHHHHHHHHHH
Confidence 999877657999999642112489999999999999764 499999999999854 78999999999999865
|
|
| >PLN00414 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-59 Score=450.52 Aligned_cols=414 Identities=27% Similarity=0.429 Sum_probs=303.3
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecC----CCCCCCC-CCcc
Q 012314 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIP----DGMEPWE-DRND 77 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-~~~~ 77 (466)
+.||+++|++++||++||+.||+.|+.+|++|||++++.+...+.... ....++++..++ ++++... ...+
T Consensus 4 ~~HVvlvPfpaqGHi~PmL~LAk~Las~G~~VT~vtt~~~~~~i~~~~----~~~~~i~~~~i~lP~~dGLP~g~e~~~~ 79 (446)
T PLN00414 4 KFHAFMYPWFGFGHMIPYLHLANKLAEKGHRVTFFLPKKAHKQLQPLN----LFPDSIVFEPLTLPPVDGLPFGAETASD 79 (446)
T ss_pred CCEEEEecCcccchHHHHHHHHHHHHhCCCEEEEEeCCchhhhhcccc----cCCCceEEEEecCCCcCCCCCccccccc
Confidence 569999999999999999999999999999999999988766554332 111247775543 5565542 1212
Q ss_pred HHHH-HHHHH---HhccHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEEeccchhHHHHHHhhcccccc
Q 012314 78 LGKL-IEKCL---QVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLID 153 (466)
Q Consensus 78 ~~~~-~~~~~---~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~ 153 (466)
.... ...+. ....+.++++++. .++||||+|. ..|+..+|+++|||++.|+++.+.....+.+... .
T Consensus 80 l~~~~~~~~~~a~~~l~~~l~~~L~~------~~p~cVV~D~-~~wa~~vA~~lgIP~~~F~~~~a~~~~~~~~~~~--~ 150 (446)
T PLN00414 80 LPNSTKKPIFDAMDLLRDQIEAKVRA------LKPDLIFFDF-VHWVPEMAKEFGIKSVNYQIISAACVAMVLAPRA--E 150 (446)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHhc------CCCeEEEECC-chhHHHHHHHhCCCEEEEecHHHHHHHHHhCcHh--h
Confidence 2111 11122 2233334444432 5789999995 7899999999999999999999988877665110 0
Q ss_pred cCccCCCCCCCccccccccCCCCC----CCcccccc-cccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHHHh
Q 012314 154 DGIIDSHGTPMSMQMFRIAPKMPE----MNSRDCFW-AHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFT 228 (466)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~p~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~~~ 228 (466)
.+ . .+|+++. +...+... .++. . ....+.+..+...+++.+++||+.+||+....
T Consensus 151 ~~------~--------~~pg~p~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~ 210 (446)
T PLN00414 151 LG------F--------PPPDYPLSKVALRGHDANVCSLFA-N-----SHELFGLITKGLKNCDVVSIRTCVELEGNLCD 210 (446)
T ss_pred cC------C--------CCCCCCCCcCcCchhhcccchhhc-c-----cHHHHHHHHHhhccCCEEEEechHHHHHHHHH
Confidence 00 0 1233332 11111110 1111 0 11233344455678999999999999987665
Q ss_pred hc-----CCcceeccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhCCCCEEE
Q 012314 229 TF-----PELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRPFLW 303 (466)
Q Consensus 229 ~~-----p~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~ 303 (466)
.+ ++++.|||+....... .....+++|.+|||+++++++|||||||......+++.+++.+++..+.+|+|
T Consensus 211 ~~~~~~~~~v~~VGPl~~~~~~~----~~~~~~~~~~~WLD~q~~~sVvyvsfGS~~~~~~~q~~e~a~gL~~s~~~Flw 286 (446)
T PLN00414 211 FIERQCQRKVLLTGPMLPEPQNK----SGKPLEDRWNHWLNGFEPGSVVFCAFGTQFFFEKDQFQEFCLGMELTGLPFLI 286 (446)
T ss_pred HHHHhcCCCeEEEcccCCCcccc----cCcccHHHHHHHHhcCCCCceEEEeecccccCCHHHHHHHHHHHHHcCCCeEE
Confidence 43 4689999997543211 00122356899999999999999999999999999999999999999999999
Q ss_pred EEcCCCCC-CCCCCCchhHHHHhcCCceee-cccchhhhhcCCCcccceeccCCchhhhhhhcCcceeecccccchhhhH
Q 012314 304 VVRPDITT-DANDRYPEGFQERVAARGQMI-SWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNE 381 (466)
Q Consensus 304 ~~~~~~~~-~~~~~~~~~~~~~~~~n~~~~-~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a 381 (466)
++...... .....+|++|+++..+++.++ +|+||.+||+|+++++|||||||||++||+++|||+|++|+++||+.||
T Consensus 287 vvr~~~~~~~~~~~lp~~f~~r~~~~g~vv~~w~PQ~~vL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na 366 (446)
T PLN00414 287 AVMPPKGSSTVQEALPEGFEERVKGRGIVWEGWVEQPLILSHPSVGCFVNHCGFGSMWESLVSDCQIVFIPQLADQVLIT 366 (446)
T ss_pred EEecCCCcccchhhCChhHHHHhcCCCeEEeccCCHHHHhcCCccceEEecCchhHHHHHHHcCCCEEecCcccchHHHH
Confidence 99753111 112468999999998888876 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCH-----HHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhc
Q 012314 382 RYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQ-----DFKARALELKEKAMSSVREGGSSYKTFQNFLQWVKTNA 456 (466)
Q Consensus 382 ~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~-----~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~~ 456 (466)
+++++.+|+|+.+..++...++.++|+++|+++|.++ ++|++|+++++.+.+ +||++ ..+++||+.+....
T Consensus 367 ~~~~~~~g~g~~~~~~~~~~~~~~~i~~~v~~~m~~~~e~g~~~r~~a~~~~~~~~~---~gg~s-s~l~~~v~~~~~~~ 442 (446)
T PLN00414 367 RLLTEELEVSVKVQREDSGWFSKESLRDTVKSVMDKDSEIGNLVKRNHKKLKETLVS---PGLLS-GYADKFVEALENEV 442 (446)
T ss_pred HHHHHHhCeEEEeccccCCccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHc---CCCcH-HHHHHHHHHHHHhc
Confidence 9997447999999642112589999999999999764 499999999999865 46634 33899999996654
Q ss_pred c
Q 012314 457 L 457 (466)
Q Consensus 457 ~ 457 (466)
.
T Consensus 443 ~ 443 (446)
T PLN00414 443 N 443 (446)
T ss_pred c
Confidence 3
|
|
| >PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-54 Score=422.59 Aligned_cols=418 Identities=16% Similarity=0.205 Sum_probs=294.6
Q ss_pred CEEEEE-cCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCC----CC---
Q 012314 4 PRVLVM-PAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWE----DR--- 75 (466)
Q Consensus 4 ~~il~~-~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~--- 75 (466)
.||+.+ |.++.||+.-+.+|+++|++|||+||++++..... ... ....+++.+.++...+... ..
T Consensus 21 ~kIl~~~P~~~~SH~~~~~~l~~~La~rGH~VTvi~p~~~~~-~~~------~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 93 (507)
T PHA03392 21 ARILAVFPTPAYSHHSVFKVYVEALAERGHNVTVIKPTLRVY-YAS------HLCGNITEIDASLSVEYFKKLVKSSAVF 93 (507)
T ss_pred ccEEEEcCCCCCcHHHHHHHHHHHHHHcCCeEEEEecccccc-ccc------CCCCCEEEEEcCCChHHHHHHHhhhhHH
Confidence 467755 78899999999999999999999999998854211 100 0124566665541111000 00
Q ss_pred ---c---cH----HHHHHHHHHhccHHH--HHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHc-CCceEEeccchhHHH
Q 012314 76 ---N---DL----GKLIEKCLQVMPGKL--EELIEEINSREDEKIDCFIADGNIGWSMEIAKKM-NVRGAVFWPSSAASV 142 (466)
Q Consensus 76 ---~---~~----~~~~~~~~~~~~~~~--~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~l-giP~v~~~~~~~~~~ 142 (466)
. +. ......+...|...+ .++.+.|+... .+||++|+|.+..|+..+|+.+ ++|.|.++++.....
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~-~kFDlvi~e~~~~c~~~la~~~~~~p~i~~ss~~~~~~ 172 (507)
T PHA03392 94 RKRGVVADSSTVTADNYMGLVRMISDQFDLPNVKNLIANKN-NKFDLLVTEAFLDYPLVFSHLFGDAPVIQISSGYGLAE 172 (507)
T ss_pred HhhhhhhhHHHHHHHHHHHHHHHHHHHHCCHHHHHHHhcCC-CceeEEEecccchhHHHHHHHhCCCCEEEEcCCCCchh
Confidence 0 00 011112222332222 12333343111 7899999999888999999999 999988877655433
Q ss_pred HHHhhcccccccCccCCC--CCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHH----HHhhhccccEEEE
Q 012314 143 ALVFRIPKLIDDGIIDSH--GTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLER----NTRAMIAVNFHFC 216 (466)
Q Consensus 143 ~~~~~~p~~~~~~~~~~~--~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~vl~ 216 (466)
..........+..+.+.. ++.+.|++.+++.++.......+.+..+. +..++...+.+.. ..+...+.+.+++
T Consensus 173 ~~~~~gg~p~~~syvP~~~~~~~~~Msf~~R~~N~~~~~~~~~~~~~~~-~~~~~l~~~~f~~~~~~~~~l~~~~~l~lv 251 (507)
T PHA03392 173 NFETMGAVSRHPVYYPNLWRSKFGNLNVWETINEIYTELRLYNEFSLLA-DEQNKLLKQQFGPDTPTIRELRNRVQLLFV 251 (507)
T ss_pred HHHhhccCCCCCeeeCCcccCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-HHHHHHHHHHcCCCCCCHHHHHhCCcEEEE
Confidence 222111111122222221 24466676766666532111111111111 2333333444322 1223367889999
Q ss_pred cChhhccHHHHhhcCCcceeccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEecccc---ccCHHHHHHHHHH
Q 012314 217 NSTYELESEAFTTFPELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFT---ILDQVQFQELALG 293 (466)
Q Consensus 217 ~s~~~le~~~~~~~p~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~---~~~~~~~~~~~~a 293 (466)
|+.+.+|++ ++++|++++|||++.++... .+.++++.+|++.++ +++|||||||.. ..+.+.++.+++|
T Consensus 252 ns~~~~d~~-rp~~p~v~~vGgi~~~~~~~------~~l~~~l~~fl~~~~-~g~V~vS~GS~~~~~~~~~~~~~~~l~a 323 (507)
T PHA03392 252 NVHPVFDNN-RPVPPSVQYLGGLHLHKKPP------QPLDDYLEEFLNNST-NGVVYVSFGSSIDTNDMDNEFLQMLLRT 323 (507)
T ss_pred ecCccccCC-CCCCCCeeeecccccCCCCC------CCCCHHHHHHHhcCC-CcEEEEECCCCCcCCCCCHHHHHHHHHH
Confidence 999999998 89999999999998854221 357888999999864 479999999974 3578899999999
Q ss_pred HHhCCCCEEEEEcCCCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCcccceeccCCchhhhhhhcCcceeeccc
Q 012314 294 LELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPY 373 (466)
Q Consensus 294 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~ 373 (466)
++++++++||++++.. .+ ...++|+++++|+||.+||+|++|++||||||.||++||+++|||+|++|+
T Consensus 324 ~~~l~~~viw~~~~~~-------~~----~~~p~Nv~i~~w~Pq~~lL~hp~v~~fItHGG~~s~~Eal~~GvP~v~iP~ 392 (507)
T PHA03392 324 FKKLPYNVLWKYDGEV-------EA----INLPANVLTQKWFPQRAVLKHKNVKAFVTQGGVQSTDEAIDALVPMVGLPM 392 (507)
T ss_pred HHhCCCeEEEEECCCc-------Cc----ccCCCceEEecCCCHHHHhcCCCCCEEEecCCcccHHHHHHcCCCEEECCC
Confidence 9999999999997541 11 124789999999999999999999999999999999999999999999999
Q ss_pred ccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Q 012314 374 FGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVK 453 (466)
Q Consensus 374 ~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~ 453 (466)
++||+.||+|+++ +|+|+.++. ..++.++|.++|+++|+|++||+||+++++.+++. .-+..+....++|++.
T Consensus 393 ~~DQ~~Na~rv~~-~G~G~~l~~---~~~t~~~l~~ai~~vl~~~~y~~~a~~ls~~~~~~---p~~~~~~av~~iE~v~ 465 (507)
T PHA03392 393 MGDQFYNTNKYVE-LGIGRALDT---VTVSAAQLVLAIVDVIENPKYRKNLKELRHLIRHQ---PMTPLHKAIWYTEHVI 465 (507)
T ss_pred CccHHHHHHHHHH-cCcEEEecc---CCcCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhC---CCCHHHHHHHHHHHHH
Confidence 9999999999999 599999985 78999999999999999999999999999999983 4445677778888887
Q ss_pred Hhc
Q 012314 454 TNA 456 (466)
Q Consensus 454 ~~~ 456 (466)
+..
T Consensus 466 r~~ 468 (507)
T PHA03392 466 RNK 468 (507)
T ss_pred hCC
Confidence 765
|
|
| >PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-55 Score=442.05 Aligned_cols=413 Identities=23% Similarity=0.306 Sum_probs=235.4
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCC---ccH-HH
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDR---NDL-GK 80 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~ 80 (466)
||+++|. ++||+.++..|+++|++|||+||++++.... .+... ...++++..++...+..+.. ... ..
T Consensus 2 kvLv~p~-~~SH~~~~~~l~~~L~~rGH~VTvl~~~~~~-~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (500)
T PF00201_consen 2 KVLVFPM-AYSHFIFMRPLAEELAERGHNVTVLTPSPSS-SLNPS------KPSNIRFETYPDPYPEEEFEEIFPEFISK 73 (500)
T ss_dssp -----------SHHHHHHHHHHHHHH-TTSEEEHHHHHH-T------------S-CCEEEE-----TT------TTHHHH
T ss_pred EEEEeCC-CcCHHHHHHHHHHHHHhcCCceEEEEeeccc-ccccc------cccceeeEEEcCCcchHHHhhhhHHHHHH
Confidence 6888885 7899999999999999999999999985422 22211 12467777766544433211 100 00
Q ss_pred ----------HHHHH----------HHhccHHH--HHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEEeccch
Q 012314 81 ----------LIEKC----------LQVMPGKL--EELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSS 138 (466)
Q Consensus 81 ----------~~~~~----------~~~~~~~~--~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~~~~ 138 (466)
....+ ...|...+ .++++.+++ .++|++|+|.+.+|+..+|+.+++|.+.+.+..
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~l~d~~l~~~l~~---~~fDlvI~d~f~~c~~~la~~l~iP~i~~~s~~ 150 (500)
T PF00201_consen 74 FFSESSFANSFWEMFKMLNAFFDFFSKSCEDLLSDPELMEQLKS---EKFDLVISDAFDPCGLALAHYLGIPVIIISSST 150 (500)
T ss_dssp HHHHHCCHHHHHHHHHHHHCHHHS----E--EEEETTSTTHHHH---HHHCT-EEEEEESSHHHHHHHHHHTHHHHHHCC
T ss_pred HhhhcccchhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHh---hccccceEeeccchhHHHHHHhcCCeEEEeccc
Confidence 11100 01111100 122223333 579999999998899999999999998765433
Q ss_pred hHHHHHHhhcccccccCccCCC--CCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHH---HHHhhhccccE
Q 012314 139 AASVALVFRIPKLIDDGIIDSH--GTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLE---RNTRAMIAVNF 213 (466)
Q Consensus 139 ~~~~~~~~~~p~~~~~~~~~~~--~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 213 (466)
+.............+..+.+.. .+++.+++.+++.++.......+....+... .+....+.+. ...+.+.+.+.
T Consensus 151 ~~~~~~~~~~g~p~~psyvP~~~s~~~~~msf~~Ri~N~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l 229 (500)
T PF00201_consen 151 PMYDLSSFSGGVPSPPSYVPSMFSDFSDRMSFWQRIKNFLFYLYFRFIFRYFFSP-QDKLYKKYFGFPFSFRELLSNASL 229 (500)
T ss_dssp SCSCCTCCTSCCCTSTTSTTCBCCCSGTTSSSST--TTSHHHHHHHHHHHHGGGS--TTS-EEESS-GGGCHHHHHHHHH
T ss_pred ccchhhhhccCCCCChHHhccccccCCCccchhhhhhhhhhhhhhccccccchhh-HHHHHhhhcccccccHHHHHHHHH
Confidence 2211110000001111111111 2334444444444432100000000000000 0000000000 01122356778
Q ss_pred EEEcChhhccHHHHhhcCCcceeccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEecccc-ccCHHHHHHHHH
Q 012314 214 HFCNSTYELESEAFTTFPELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFT-ILDQVQFQELAL 292 (466)
Q Consensus 214 vl~~s~~~le~~~~~~~p~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~-~~~~~~~~~~~~ 292 (466)
+++|+.+.+++| +|..|++.+||+++.++.. +.++++.+|++...++++|||||||.. .++.+..+.+++
T Consensus 230 ~l~ns~~~ld~p-rp~~p~v~~vGgl~~~~~~--------~l~~~~~~~~~~~~~~~vv~vsfGs~~~~~~~~~~~~~~~ 300 (500)
T PF00201_consen 230 VLINSHPSLDFP-RPLLPNVVEVGGLHIKPAK--------PLPEELWNFLDSSGKKGVVYVSFGSIVSSMPEEKLKEIAE 300 (500)
T ss_dssp CCSSTEEE-----HHHHCTSTTGCGC-S------------TCHHHHHHHTSTTTTTEEEEEE-TSSSTT-HHHHHHHHHH
T ss_pred HhhhccccCcCC-cchhhcccccCcccccccc--------ccccccchhhhccCCCCEEEEecCcccchhHHHHHHHHHH
Confidence 999999999998 8999999999999887553 466788899998556789999999985 355566899999
Q ss_pred HHHhCCCCEEEEEcCCCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCcccceeccCCchhhhhhhcCcceeecc
Q 012314 293 GLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWP 372 (466)
Q Consensus 293 a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P 372 (466)
++++++++|||++++. .++ .+++|+++++|+||.+||+||++++||||||+||+.||+++|||+|++|
T Consensus 301 ~~~~~~~~~iW~~~~~--------~~~----~l~~n~~~~~W~PQ~~lL~hp~v~~fitHgG~~s~~Ea~~~gvP~l~~P 368 (500)
T PF00201_consen 301 AFENLPQRFIWKYEGE--------PPE----NLPKNVLIVKWLPQNDLLAHPRVKLFITHGGLNSTQEALYHGVPMLGIP 368 (500)
T ss_dssp HHHCSTTEEEEEETCS--------HGC----HHHTTEEEESS--HHHHHTSTTEEEEEES--HHHHHHHHHCT--EEE-G
T ss_pred HHhhCCCccccccccc--------ccc----cccceEEEeccccchhhhhcccceeeeeccccchhhhhhhccCCccCCC
Confidence 9999999999999753 112 2478999999999999999999999999999999999999999999999
Q ss_pred cccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Q 012314 373 YFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWV 452 (466)
Q Consensus 373 ~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~ 452 (466)
+++||+.||+++++ .|+|+.++. ..+|.++|.++|+++|+|++|++||+++++.+++. .-+..+.+..++|++
T Consensus 369 ~~~DQ~~na~~~~~-~G~g~~l~~---~~~~~~~l~~ai~~vl~~~~y~~~a~~ls~~~~~~---p~~p~~~~~~~ie~v 441 (500)
T PF00201_consen 369 LFGDQPRNAARVEE-KGVGVVLDK---NDLTEEELRAAIREVLENPSYKENAKRLSSLFRDR---PISPLERAVWWIEYV 441 (500)
T ss_dssp CSTTHHHHHHHHHH-TTSEEEEGG---GC-SHHHHHHHHHHHHHSHHHHHHHHHHHHTTT--------------------
T ss_pred CcccCCccceEEEE-EeeEEEEEe---cCCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcC---CCCHHHHHHHHHHHH
Confidence 99999999999999 599999985 78999999999999999999999999999999985 556677778888888
Q ss_pred HHhcc
Q 012314 453 KTNAL 457 (466)
Q Consensus 453 ~~~~~ 457 (466)
.+...
T Consensus 442 ~~~~~ 446 (500)
T PF00201_consen 442 ARHGG 446 (500)
T ss_dssp -----
T ss_pred HhcCC
Confidence 87643
|
This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A .... |
| >TIGR01426 MGT glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-44 Score=347.07 Aligned_cols=362 Identities=21% Similarity=0.291 Sum_probs=256.7
Q ss_pred cCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCCC-----CccHHHHHHH
Q 012314 10 PAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWED-----RNDLGKLIEK 84 (466)
Q Consensus 10 ~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 84 (466)
.+|+.||++|+++||++|++|||+|+|++++.+.+.+.+. ++++..++...+.... ..+....++.
T Consensus 2 ~~p~~Ghv~P~l~lA~~L~~~Gh~V~~~~~~~~~~~v~~~---------G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (392)
T TIGR01426 2 NIPAHGHVNPTLGVVEELVARGHRVTYATTEEFAERVEAA---------GAEFVLYGSALPPPDNPPENTEEEPIDIIEK 72 (392)
T ss_pred CCCccccccccHHHHHHHHhCCCeEEEEeCHHHHHHHHHc---------CCEEEecCCcCccccccccccCcchHHHHHH
Confidence 5789999999999999999999999999999999888876 6888887754432110 0233444454
Q ss_pred HHHhccHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEEeccchhHHHHHHhhcccccccCccCCCCCCC
Q 012314 85 CLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSHGTPM 164 (466)
Q Consensus 85 ~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 164 (466)
+.......+.++++.++. .+||+||+|.+.+++..+|+.+|||+|.+++++.... .++... .+.
T Consensus 73 ~~~~~~~~~~~l~~~~~~---~~pDlVi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~----~~~~~~---------~~~ 136 (392)
T TIGR01426 73 LLDEAEDVLPQLEEAYKG---DRPDLIVYDIASWTGRLLARKWDVPVISSFPTFAANE----EFEEMV---------SPA 136 (392)
T ss_pred HHHHHHHHHHHHHHHhcC---CCCCEEEECCccHHHHHHHHHhCCCEEEEehhhcccc----cccccc---------ccc
Confidence 544444455555555544 7899999999888999999999999998865432110 000000 000
Q ss_pred ccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHH------Hhh--hccccEEEEcChhhccHHHHhhcCCccee
Q 012314 165 SMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERN------TRA--MIAVNFHFCNSTYELESEAFTTFPELLPI 236 (466)
Q Consensus 165 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~--~~~~~~vl~~s~~~le~~~~~~~p~v~~V 236 (466)
........+... +.. .........+..+. ... ....+..+..+.+.|+++...++++++++
T Consensus 137 ~~~~~~~~~~~~----~~~-------~~~~~~~~~~r~~~gl~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~ 205 (392)
T TIGR01426 137 GEGSAEEGAIAE----RGL-------AEYVARLSALLEEHGITTPPVEFLAAPRRDLNLVYTPKAFQPAGETFDDSFTFV 205 (392)
T ss_pred chhhhhhhcccc----chh-------HHHHHHHHHHHHHhCCCCCCHHHHhcCCcCcEEEeCChHhCCCccccCCCeEEE
Confidence 000000000000 000 00000011111100 011 12344567888888887656678899999
Q ss_pred ccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCC
Q 012314 237 GPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDR 316 (466)
Q Consensus 237 Gpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~ 316 (466)
||+....... ..|....+++++||+++||........++.+++++.+.+.+++|..+...+
T Consensus 206 Gp~~~~~~~~-------------~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~g~~~~------ 266 (392)
T TIGR01426 206 GPCIGDRKED-------------GSWERPGDGRPVVLISLGTVFNNQPSFYRTCVEAFRDLDWHVVLSVGRGVD------ 266 (392)
T ss_pred CCCCCCcccc-------------CCCCCCCCCCCEEEEecCccCCCCHHHHHHHHHHHhcCCCeEEEEECCCCC------
Confidence 9987654321 136655566889999999975556668899999999999999998875511
Q ss_pred CchhHHHHhcCCceeecccchhhhhcCCCcccceeccCCchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeec
Q 012314 317 YPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDR 396 (466)
Q Consensus 317 ~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~ 396 (466)
.+.+ ...++|+.+.+|+|+.++|.++++ +|||||+||++||+++|+|+|++|...||..||.++++ +|+|..+..
T Consensus 267 -~~~~-~~~~~~v~~~~~~p~~~ll~~~~~--~I~hgG~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~-~g~g~~l~~ 341 (392)
T TIGR01426 267 -PADL-GELPPNVEVRQWVPQLEILKKADA--FITHGGMNSTMEALFNGVPMVAVPQGADQPMTARRIAE-LGLGRHLPP 341 (392)
T ss_pred -hhHh-ccCCCCeEEeCCCCHHHHHhhCCE--EEECCCchHHHHHHHhCCCEEecCCcccHHHHHHHHHH-CCCEEEecc
Confidence 1111 124678889999999999987776 99999999999999999999999999999999999999 699999974
Q ss_pred CCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Q 012314 397 DEGGIITREEIKNKVDQVLGNQDFKARALELKEKAMSS 434 (466)
Q Consensus 397 ~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~~~ 434 (466)
..+++++|.++|+++|+|++|+++++++++.+++.
T Consensus 342 ---~~~~~~~l~~ai~~~l~~~~~~~~~~~l~~~~~~~ 376 (392)
T TIGR01426 342 ---EEVTAEKLREAVLAVLSDPRYAERLRKMRAEIREA 376 (392)
T ss_pred ---ccCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHc
Confidence 67899999999999999999999999999999873
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. |
| >cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-43 Score=346.70 Aligned_cols=364 Identities=15% Similarity=0.122 Sum_probs=250.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCC----------
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWE---------- 73 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 73 (466)
|||+|++.|+.||++|+++||++|++|||+|+|++++.+...+... ++++..+++..+...
T Consensus 1 mrIl~~~~p~~GHv~P~l~la~~L~~rGh~V~~~t~~~~~~~v~~~---------G~~~~~~~~~~~~~~~~~~~~~~~~ 71 (401)
T cd03784 1 MRVLITTIGSRGDVQPLVALAWALRAAGHEVRVATPPEFADLVEAA---------GLEFVPVGGDPDELLASPERNAGLL 71 (401)
T ss_pred CeEEEEeCCCcchHHHHHHHHHHHHHCCCeEEEeeCHhHHHHHHHc---------CCceeeCCCCHHHHHhhhhhccccc
Confidence 5899999999999999999999999999999999999888877764 688888775332210
Q ss_pred --CCccHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEEeccchhHHHHHHhhcccc
Q 012314 74 --DRNDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKL 151 (466)
Q Consensus 74 --~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~ 151 (466)
...........+.......++++++.++. .+||+||+|.+.+++..+|+++|||++.+++.+.......
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~pDlvi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~------ 142 (401)
T cd03784 72 LLGPGLLLGALRLLRREAEAMLDDLVAAARD---WGPDLVVADPLAFAGAVAAEALGIPAVRLLLGPDTPTSAF------ 142 (401)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHhcc---cCCCEEEeCcHHHHHHHHHHHhCCCeEEeecccCCccccC------
Confidence 01112223344444455666666666654 7899999999888999999999999999987654311100
Q ss_pred cccCccCCCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhh---------ccccEEEEcChhhc
Q 012314 152 IDDGIIDSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAM---------IAVNFHFCNSTYEL 222 (466)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~vl~~s~~~l 222 (466)
.+ .. +. .....+......................+ ...+..++...+.+
T Consensus 143 ----------~~-----~~---~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~ 200 (401)
T cd03784 143 ----------PP-----PL---GR----ANLRLYALLEAELWQDLLGAWLRARRRRLGLPPLSLLDGSDVPELYGFSPAV 200 (401)
T ss_pred ----------CC-----cc---ch----HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCCcEEEecCccc
Confidence 00 00 00 00000000000000000111111111111 11233444444444
Q ss_pred cHHHHhhcCCcceec-cccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccc-cCHHHHHHHHHHHHhCCCC
Q 012314 223 ESEAFTTFPELLPIG-PLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTI-LDQVQFQELALGLELCKRP 300 (466)
Q Consensus 223 e~~~~~~~p~v~~VG-pl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~-~~~~~~~~~~~a~~~~~~~ 300 (466)
.++..++.++..++| ++...+.. ...+.++..|++. ++++|||++||... ........+++++...+.+
T Consensus 201 ~~~~~~~~~~~~~~g~~~~~~~~~-------~~~~~~~~~~~~~--~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~~~~ 271 (401)
T cd03784 201 LPPPPDWPRFDLVTGYGFRDVPYN-------GPPPPELWLFLAA--GRPPVYVGFGSMVVRDPEALARLDVEAVATLGQR 271 (401)
T ss_pred CCCCCCccccCcEeCCCCCCCCCC-------CCCCHHHHHHHhC--CCCcEEEeCCCCcccCHHHHHHHHHHHHHHcCCe
Confidence 444356777888886 43333322 2345567788865 36799999999855 3456788899999999999
Q ss_pred EEEEEcCCCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCcccceeccCCchhhhhhhcCcceeecccccchhhh
Q 012314 301 FLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLN 380 (466)
Q Consensus 301 ~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~~ 380 (466)
+||..+.... . . ...++|+++.+|+||.++|.++++ ||||||+||++||+++|||+|++|...||+.|
T Consensus 272 ~i~~~g~~~~----~---~---~~~~~~v~~~~~~p~~~ll~~~d~--~I~hgG~~t~~eal~~GvP~v~~P~~~dQ~~~ 339 (401)
T cd03784 272 AILSLGWGGL----G---A---EDLPDNVRVVDFVPHDWLLPRCAA--VVHHGGAGTTAAALRAGVPQLVVPFFGDQPFW 339 (401)
T ss_pred EEEEccCccc----c---c---cCCCCceEEeCCCCHHHHhhhhhe--eeecCCchhHHHHHHcCCCEEeeCCCCCcHHH
Confidence 9999876511 1 1 124689999999999999977666 99999999999999999999999999999999
Q ss_pred HHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 012314 381 ERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALELKEKAMS 433 (466)
Q Consensus 381 a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~~ 433 (466)
|+++++ +|+|+.+.. ..++.++|.++|++++++ .++++++++++.+++
T Consensus 340 a~~~~~-~G~g~~l~~---~~~~~~~l~~al~~~l~~-~~~~~~~~~~~~~~~ 387 (401)
T cd03784 340 AARVAE-LGAGPALDP---RELTAERLAAALRRLLDP-PSRRRAAALLRRIRE 387 (401)
T ss_pred HHHHHH-CCCCCCCCc---ccCCHHHHHHHHHHHhCH-HHHHHHHHHHHHHHh
Confidence 999999 699999975 568999999999999975 566777777777765
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
| >KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-43 Score=353.22 Aligned_cols=429 Identities=29% Similarity=0.446 Sum_probs=277.5
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHH-hhhcCC--CCCCCeEEEecCCCCCCCCCCc--c
Q 012314 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVE-SLQGKN--YLGEQIHLVSIPDGMEPWEDRN--D 77 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~--~ 77 (466)
+.+++++++|+.||++|+..+|+.|+++||+||++++......... ...... .....+.+...+++++...... .
T Consensus 5 ~~~~il~~~p~~sH~~~~~~la~~L~~~gh~vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (496)
T KOG1192|consen 5 KAHNILVPFPGQSHLNPMLQLAKRLAERGHNVTVVTPSFNALKLSKSSKSKSIKKINPPPFEFLTIPDGLPEGWEDDDLD 84 (496)
T ss_pred cceeEEEECCcccHHHHHHHHHHHHHHcCCceEEEEeechhcccCCcccceeeeeeecChHHhhhhhhhhccchHHHHHH
Confidence 4678899999999999999999999999999999999866554322 100000 0001122222222222221111 1
Q ss_pred HHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcC-CceEEeccchhHHHHHHhhcccccccCc
Q 012314 78 LGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMN-VRGAVFWPSSAASVALVFRIPKLIDDGI 156 (466)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lg-iP~v~~~~~~~~~~~~~~~~p~~~~~~~ 156 (466)
.......+...+...+++.+..+....+.++|++|+|.+..+...++.... +|...++...+.........+.. +
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~g~~~~~~----~ 160 (496)
T KOG1192|consen 85 ISESLLELNKTCEDLLRDPLEKLLLLKSEKFDLIISDPFLGLFLLLAIPSFVIPLLSFPTSSAVLLALGLPSPLS----Y 160 (496)
T ss_pred HHHHHHHHHHHHHHHHhchHHHHHHhhcCCccEEEechhhHHHHHhcccceEEEeecccCchHHHHhcCCcCccc----c
Confidence 111244555556666666555444332244999999998677777777765 88888887777655554332211 1
Q ss_pred cCCCCC--C-CccccccccCCCCCCCcccccccccCCCCchhHHHHHHHH-------HHhhhccccEEEEcChhhccHHH
Q 012314 157 IDSHGT--P-MSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLER-------NTRAMIAVNFHFCNSTYELESEA 226 (466)
Q Consensus 157 ~~~~~~--~-~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~vl~~s~~~le~~~ 226 (466)
.+.... . ..+....+.+++.......+.......+............ ..+.....+..++|+.+.++...
T Consensus 161 ~p~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ln~~~~~~~~~ 240 (496)
T KOG1192|consen 161 VPSPFSLSSGDDMSFPERVPNLIKKDLPSFLFSLSDDRKQDKISKELLGDILNWKPTASGIIVNASFIFLNSNPLLDFEP 240 (496)
T ss_pred cCcccCccccccCcHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCCcccccccHHHhhhcCeEEEEccCcccCCCC
Confidence 110000 0 1122222222111000000000000000001111111111 11223566789999999988754
Q ss_pred HhhcCCcceeccccCCCCCCCCCCCcccCCccchhhhccCCCC--eEEEEEecccc---ccCHHHHHHHHHHHHhC-CCC
Q 012314 227 FTTFPELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPS--SVVYVSFGSFT---ILDQVQFQELALGLELC-KRP 300 (466)
Q Consensus 227 ~~~~p~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~v~vs~Gs~~---~~~~~~~~~~~~a~~~~-~~~ 300 (466)
++..+++++|||+....... +. ..+.+|++..+.. ++|||||||.. .++.++...++.+++++ ++.
T Consensus 241 ~~~~~~v~~IG~l~~~~~~~------~~--~~~~~wl~~~~~~~~~vvyvSfGS~~~~~~lp~~~~~~l~~~l~~~~~~~ 312 (496)
T KOG1192|consen 241 RPLLPKVIPIGPLHVKDSKQ------KS--PLPLEWLDILDESRHSVVYISFGSMVNSADLPEEQKKELAKALESLQGVT 312 (496)
T ss_pred CCCCCCceEECcEEecCccc------cc--cccHHHHHHHhhccCCeEEEECCcccccccCCHHHHHHHHHHHHhCCCce
Confidence 77789999999999984432 11 1334566655443 79999999996 79999999999999999 788
Q ss_pred EEEEEcCCCCCCCCCCCchhHHHHhcCCceeecccchhhh-hcCCCcccceeccCCchhhhhhhcCcceeecccccchhh
Q 012314 301 FLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRV-LNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFL 379 (466)
Q Consensus 301 ~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~l-l~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~ 379 (466)
|+|++.... ...+++++.++.+.|+...+|+||.++ |.|+++++||||||+||++|++++|||+|++|+++||+.
T Consensus 313 FiW~~~~~~----~~~~~~~~~~~~~~nV~~~~W~PQ~~lll~H~~v~~FvTHgG~nSt~E~~~~GvP~v~~Plf~DQ~~ 388 (496)
T KOG1192|consen 313 FLWKYRPDD----SIYFPEGLPNRGRGNVVLSKWAPQNDLLLDHPAVGGFVTHGGWNSTLESIYSGVPMVCVPLFGDQPL 388 (496)
T ss_pred EEEEecCCc----chhhhhcCCCCCcCceEEecCCCcHHHhcCCCcCcEEEECCcccHHHHHHhcCCceecCCccccchh
Confidence 999998651 111222222111457888899999997 699999999999999999999999999999999999999
Q ss_pred hHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHh
Q 012314 380 NERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVKTN 455 (466)
Q Consensus 380 ~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~ 455 (466)
||+++++. |.|..+.. ..++.+.+.+++.+++.+++|+++++++++.+++. ..+. +....+++.....
T Consensus 389 Na~~i~~~-g~~~v~~~---~~~~~~~~~~~~~~il~~~~y~~~~~~l~~~~~~~---p~~~-~~~~~~~e~~~~~ 456 (496)
T KOG1192|consen 389 NARLLVRH-GGGGVLDK---RDLVSEELLEAIKEILENEEYKEAAKRLSEILRDQ---PISP-ELAVKWVEFVARH 456 (496)
T ss_pred HHHHHHhC-CCEEEEeh---hhcCcHHHHHHHHHHHcChHHHHHHHHHHHHHHcC---CCCH-HHHHHHHHHHHhc
Confidence 99999995 77777764 55666569999999999999999999999999973 5555 6666566665554
|
|
| >COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=320.09 Aligned_cols=392 Identities=19% Similarity=0.163 Sum_probs=250.3
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCCC---CccHH
Q 012314 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWED---RNDLG 79 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 79 (466)
++||+|+..|..||++|+++|+++|.++||+|+|+|++.+.+.+.+. ++.|..++........ .....
T Consensus 1 ~mkil~~~~~~~Ghv~p~~aL~~eL~~~gheV~~~~~~~~~~~ve~a---------g~~f~~~~~~~~~~~~~~~~~~~~ 71 (406)
T COG1819 1 RMKILFVVCGAYGHVNPCLALGKELRRRGHEVVFASTGKFKEFVEAA---------GLAFVAYPIRDSELATEDGKFAGV 71 (406)
T ss_pred CceEEEEeccccccccchHHHHHHHHhcCCeEEEEeCHHHHHHHHHh---------CcceeeccccCChhhhhhhhhhcc
Confidence 57899999999999999999999999999999999999999999887 4667666643111111 11111
Q ss_pred H-HHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEEeccchhHHHHHHh-hcccccccCcc
Q 012314 80 K-LIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVF-RIPKLIDDGII 157 (466)
Q Consensus 80 ~-~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~-~~p~~~~~~~~ 157 (466)
+ +.. .........+++++.+.+ ..+|+++-|.... ...+++..++|++.............. +.+.....+..
T Consensus 72 ~~~~~-~~~~~~~~~~~~~~~~~e---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (406)
T COG1819 72 KSFRR-LLQQFKKLIRELLELLRE---LEPDLVVDDARLS-LGLAARLLGIPVVGINVAPYTPLPAAGLPLPPVGIAGKL 146 (406)
T ss_pred chhHH-HhhhhhhhhHHHHHHHHh---cchhhhhcchhhh-hhhhhhhcccchhhhhhhhccCCcccccCcccccccccc
Confidence 1 111 222233334455454544 7899999997444 448899999999886544332111111 00000000000
Q ss_pred CCCCCCCccccccccCCCCCCCcc-cccccccCCCCchhHHHH--HHH-HHHhhhccccEEEEcChhhccHHHHhhcCCc
Q 012314 158 DSHGTPMSMQMFRIAPKMPEMNSR-DCFWAHIGDWTSQKIFFD--LLE-RNTRAMIAVNFHFCNSTYELESEAFTTFPEL 233 (466)
Q Consensus 158 ~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~vl~~s~~~le~~~~~~~p~v 233 (466)
. ...-+++..... .....+............ ... ...+.+.......+...+...++....+...
T Consensus 147 ~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 215 (406)
T COG1819 147 P-----------IPLYPLPPRLVRPLIFARSWLPKLVVRRNLGLELGLPNIRRLFASGPLLEIAYTDVLFPPGDRLPFIG 215 (406)
T ss_pred c-----------ccccccChhhccccccchhhhhhhhhhhhccccccccchHHHhcCCCCccccccccccCCCCCCCCCc
Confidence 0 000000000000 000000000000000000 000 0011111111111111111111102234455
Q ss_pred ceeccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCC
Q 012314 234 LPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDA 313 (466)
Q Consensus 234 ~~VGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~ 313 (466)
.++||+....... +..|. ..++++||+||||.... .++++.+.++++.++.++|+..++. +.
T Consensus 216 ~~~~~~~~~~~~~------------~~~~~--~~d~~~vyvslGt~~~~-~~l~~~~~~a~~~l~~~vi~~~~~~-~~-- 277 (406)
T COG1819 216 PYIGPLLGEAANE------------LPYWI--PADRPIVYVSLGTVGNA-VELLAIVLEALADLDVRVIVSLGGA-RD-- 277 (406)
T ss_pred Ccccccccccccc------------Ccchh--cCCCCeEEEEcCCcccH-HHHHHHHHHHHhcCCcEEEEecccc-cc--
Confidence 6677777665532 12332 24577999999998655 8899999999999999999988652 10
Q ss_pred CCCCchhHHHHhcCCceeecccchhhhhcCCCcccceeccCCchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeE
Q 012314 314 NDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLK 393 (466)
Q Consensus 314 ~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~ 393 (466)
-....++|+++++|+||.++|.++++ ||||||+||++|||++|||+|++|...||+.||.|+++ +|+|..
T Consensus 278 -------~~~~~p~n~~v~~~~p~~~~l~~ad~--vI~hGG~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~-~G~G~~ 347 (406)
T COG1819 278 -------TLVNVPDNVIVADYVPQLELLPRADA--VIHHGGAGTTSEALYAGVPLVVIPDGADQPLNAERVEE-LGAGIA 347 (406)
T ss_pred -------ccccCCCceEEecCCCHHHHhhhcCE--EEecCCcchHHHHHHcCCCEEEecCCcchhHHHHHHHH-cCCcee
Confidence 01124788889999999999977666 99999999999999999999999999999999999999 699999
Q ss_pred eecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHh
Q 012314 394 FDRDEGGIITREEIKNKVDQVLGNQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVKTN 455 (466)
Q Consensus 394 l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~ 455 (466)
+.. +.++.+.|+++|.++|+|+.|+++++++++.++.. +| .+.+.+.++.....
T Consensus 348 l~~---~~l~~~~l~~av~~vL~~~~~~~~~~~~~~~~~~~---~g--~~~~a~~le~~~~~ 401 (406)
T COG1819 348 LPF---EELTEERLRAAVNEVLADDSYRRAAERLAEEFKEE---DG--PAKAADLLEEFARE 401 (406)
T ss_pred cCc---ccCCHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhc---cc--HHHHHHHHHHHHhc
Confidence 985 78999999999999999999999999999999985 44 66677777765554
|
|
| >PF13528 Glyco_trans_1_3: Glycosyl transferase family 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1e-25 Score=213.50 Aligned_cols=305 Identities=17% Similarity=0.206 Sum_probs=195.5
Q ss_pred CEEEEEcCC-CccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCC-CCCCCCCccHHHH
Q 012314 4 PRVLVMPAP-AQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDG-MEPWEDRNDLGKL 81 (466)
Q Consensus 4 ~~il~~~~~-~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 81 (466)
|||+|...+ |.||+.++++||++| |||+|+|++.......+.. .+....++.- ....+...+....
T Consensus 1 MkIl~~v~~~G~GH~~R~~~la~~L--rg~~v~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~ 68 (318)
T PF13528_consen 1 MKILFYVQGHGLGHASRCLALARAL--RGHEVTFITSGPAPEFLKP----------RFPVREIPGLGPIQENGRLDRWKT 68 (318)
T ss_pred CEEEEEeCCCCcCHHHHHHHHHHHH--ccCceEEEEcCCcHHHhcc----------ccCEEEccCceEeccCCccchHHH
Confidence 688888877 559999999999999 6999999999866554432 2334444321 1111111111111
Q ss_pred HHHH---HHhccHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEEeccchhHHHHHHhhcccccccCccC
Q 012314 82 IEKC---LQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIID 158 (466)
Q Consensus 82 ~~~~---~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~ 158 (466)
.... .......++++++.++. .+||+||+|. .+.+..+|+..|||++.+........
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~l~~---~~pDlVIsD~-~~~~~~aa~~~giP~i~i~~~~~~~~---------------- 128 (318)
T PF13528_consen 69 VRNNIRWLARLARRIRREIRWLRE---FRPDLVISDF-YPLAALAARRAGIPVIVISNQYWFLH---------------- 128 (318)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHh---cCCCEEEEcC-hHHHHHHHHhcCCCEEEEEehHHccc----------------
Confidence 1111 11223445555555555 8899999995 66678999999999999876554300
Q ss_pred CCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHh-h-hccccEEEEcChhhccHHHHhhcCCccee
Q 012314 159 SHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTR-A-MIAVNFHFCNSTYELESEAFTTFPELLPI 236 (466)
Q Consensus 159 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~vl~~s~~~le~~~~~~~p~v~~V 236 (466)
+.. .+. .......++.+... . ...++..+.-+++ .. .....++.++
T Consensus 129 --------------~~~------~~~--------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~---~~~~~~~~~~ 176 (318)
T PF13528_consen 129 --------------PNF------WLP--------WDQDFGRLIERYIDRYHFPPADRRLALSFY-PP---LPPFFRVPFV 176 (318)
T ss_pred --------------ccC------Ccc--------hhhhHHHHHHHhhhhccCCcccceecCCcc-cc---cccccccccc
Confidence 000 000 00111122222111 1 3444555544444 11 2223457788
Q ss_pred ccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhCC-CCEEEEEcCCCCCCCCC
Q 012314 237 GPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCK-RPFLWVVRPDITTDAND 315 (466)
Q Consensus 237 Gpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~-~~~i~~~~~~~~~~~~~ 315 (466)
||+..++... .. ..+++.|+|+||..... .+.++++..+ +++++. +..
T Consensus 177 ~p~~~~~~~~----------------~~-~~~~~~iLv~~gg~~~~------~~~~~l~~~~~~~~~v~-g~~------- 225 (318)
T PF13528_consen 177 GPIIRPEIRE----------------LP-PEDEPKILVYFGGGGPG------DLIEALKALPDYQFIVF-GPN------- 225 (318)
T ss_pred Cchhcccccc----------------cC-CCCCCEEEEEeCCCcHH------HHHHHHHhCCCCeEEEE-cCC-------
Confidence 9888765432 00 12345899999975321 5566776666 566655 433
Q ss_pred CCchhHHHHhcCCceeeccc-c-hhhhhcCCCcccceeccCCchhhhhhhcCcceeeccc--ccchhhhHHHHHHhhhce
Q 012314 316 RYPEGFQERVAARGQMISWA-P-QLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPY--FGDQFLNERYICDFWKVG 391 (466)
Q Consensus 316 ~~~~~~~~~~~~n~~~~~~~-p-~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~--~~DQ~~~a~rv~~~~G~G 391 (466)
. . +...+|+.+.+|. + ..++|..+++ +|||||.||++|++++|+|+|++|. ..||..||+++++ +|+|
T Consensus 226 -~-~---~~~~~ni~~~~~~~~~~~~~m~~ad~--vIs~~G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~-~G~~ 297 (318)
T PF13528_consen 226 -A-A---DPRPGNIHVRPFSTPDFAELMAAADL--VISKGGYTTISEALALGKPALVIPRPGQDEQEYNARKLEE-LGLG 297 (318)
T ss_pred -c-c---cccCCCEEEeecChHHHHHHHHhCCE--EEECCCHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHH-CCCe
Confidence 0 0 0126788888876 3 4569966655 9999999999999999999999999 7899999999999 6999
Q ss_pred eEeecCCCCCcCHHHHHHHHHHH
Q 012314 392 LKFDRDEGGIITREEIKNKVDQV 414 (466)
Q Consensus 392 ~~l~~~~~~~~~~~~l~~~i~~l 414 (466)
..+.. .+++++.|+++|+++
T Consensus 298 ~~~~~---~~~~~~~l~~~l~~~ 317 (318)
T PF13528_consen 298 IVLSQ---EDLTPERLAEFLERL 317 (318)
T ss_pred EEccc---ccCCHHHHHHHHhcC
Confidence 99975 889999999999875
|
|
| >PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.4e-25 Score=208.56 Aligned_cols=316 Identities=16% Similarity=0.182 Sum_probs=196.6
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHH-HHHhhhcCCCCCCCeEEEecCC-CCCCCCCCccHHHHH
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKR-VVESLQGKNYLGEQIHLVSIPD-GMEPWEDRNDLGKLI 82 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 82 (466)
||++.+.++.||++|.++||++|.++||+|+|++.....+. +.. ..++.++.++. ++.. ...+. .+
T Consensus 3 ~i~~~~GGTGGHi~Pala~a~~l~~~g~~v~~vg~~~~~e~~l~~--------~~g~~~~~~~~~~l~~---~~~~~-~~ 70 (352)
T PRK12446 3 KIVFTGGGSAGHVTPNLAIIPYLKEDNWDISYIGSHQGIEKTIIE--------KENIPYYSISSGKLRR---YFDLK-NI 70 (352)
T ss_pred eEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEECCCccccccCc--------ccCCcEEEEeccCcCC---CchHH-HH
Confidence 58888888889999999999999999999999997654331 111 13577777652 2211 11111 12
Q ss_pred HHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCch--hHHHHHHHcCCceEEeccchhHHHHHHhhcccccccCccCCC
Q 012314 83 EKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIG--WSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSH 160 (466)
Q Consensus 83 ~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 160 (466)
....+... .+.+.++.+++ .+||+||....+. .+..+|..+++|++..-....
T Consensus 71 ~~~~~~~~-~~~~~~~i~~~---~kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i~e~n~~--------------------- 125 (352)
T PRK12446 71 KDPFLVMK-GVMDAYVRIRK---LKPDVIFSKGGFVSVPVVIGGWLNRVPVLLHESDMT--------------------- 125 (352)
T ss_pred HHHHHHHH-HHHHHHHHHHh---cCCCEEEecCchhhHHHHHHHHHcCCCEEEECCCCC---------------------
Confidence 22222211 22222333333 8999999987444 478899999999988432110
Q ss_pred CCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHHHhhc--CCcceecc
Q 012314 161 GTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTF--PELLPIGP 238 (466)
Q Consensus 161 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~~~~~--p~v~~VGp 238 (466)
+++ ..+++ ...++.+++. +++ . ...+ .++.++|+
T Consensus 126 ------------~g~---------------------~nr~~------~~~a~~v~~~-f~~---~-~~~~~~~k~~~tG~ 161 (352)
T PRK12446 126 ------------PGL---------------------ANKIA------LRFASKIFVT-FEE---A-AKHLPKEKVIYTGS 161 (352)
T ss_pred ------------ccH---------------------HHHHH------HHhhCEEEEE-ccc---h-hhhCCCCCeEEECC
Confidence 100 01111 1233334333 221 1 2222 36788996
Q ss_pred ccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCH-HHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCC
Q 012314 239 LLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQ-VQFQELALGLELCKRPFLWVVRPDITTDANDRY 317 (466)
Q Consensus 239 l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~-~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~ 317 (466)
-..+.... .......+.+.-.+++++|+|..||.+.... +.+..++..+. .+.+++|.++.+. +
T Consensus 162 Pvr~~~~~-------~~~~~~~~~~~l~~~~~~iLv~GGS~Ga~~in~~~~~~l~~l~-~~~~vv~~~G~~~-------~ 226 (352)
T PRK12446 162 PVREEVLK-------GNREKGLAFLGFSRKKPVITIMGGSLGAKKINETVREALPELL-LKYQIVHLCGKGN-------L 226 (352)
T ss_pred cCCccccc-------ccchHHHHhcCCCCCCcEEEEECCccchHHHHHHHHHHHHhhc-cCcEEEEEeCCch-------H
Confidence 55543311 0111111222223457799999999865333 23444444442 2478888888551 1
Q ss_pred chhHHHHhcCCceeeccc-ch-hhhhcCCCcccceeccCCchhhhhhhcCcceeecccc-----cchhhhHHHHHHhhhc
Q 012314 318 PEGFQERVAARGQMISWA-PQ-LRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYF-----GDQFLNERYICDFWKV 390 (466)
Q Consensus 318 ~~~~~~~~~~n~~~~~~~-p~-~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~-----~DQ~~~a~rv~~~~G~ 390 (466)
.+... . ..+..+..|+ +. .+++..+++ +|||||.+|++|++++|+|+|++|+. .+|..||.++++ .|+
T Consensus 227 ~~~~~-~-~~~~~~~~f~~~~m~~~~~~adl--vIsr~G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~-~g~ 301 (352)
T PRK12446 227 DDSLQ-N-KEGYRQFEYVHGELPDILAITDF--VISRAGSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESFER-QGY 301 (352)
T ss_pred HHHHh-h-cCCcEEecchhhhHHHHHHhCCE--EEECCChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHHHH-CCC
Confidence 11111 1 1344566887 54 468988777 99999999999999999999999984 489999999999 599
Q ss_pred eeEeecCCCCCcCHHHHHHHHHHHhcCH-HHHHHH
Q 012314 391 GLKFDRDEGGIITREEIKNKVDQVLGNQ-DFKARA 424 (466)
Q Consensus 391 G~~l~~~~~~~~~~~~l~~~i~~ll~~~-~~r~~a 424 (466)
|..+.. ++++++.|.+++.++++|+ .+++++
T Consensus 302 ~~~l~~---~~~~~~~l~~~l~~ll~~~~~~~~~~ 333 (352)
T PRK12446 302 ASVLYE---EDVTVNSLIKHVEELSHNNEKYKTAL 333 (352)
T ss_pred EEEcch---hcCCHHHHHHHHHHHHcCHHHHHHHH
Confidence 999974 7889999999999999886 444433
|
|
| >TIGR00661 MJ1255 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.5e-23 Score=195.51 Aligned_cols=309 Identities=13% Similarity=0.117 Sum_probs=172.0
Q ss_pred EEEEEcCCCc-cCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeE-EEecCC-CCCCCCCCccHHHH
Q 012314 5 RVLVMPAPAQ-GHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIH-LVSIPD-GMEPWEDRNDLGKL 81 (466)
Q Consensus 5 ~il~~~~~~~-GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~ 81 (466)
||++...+.. ||+.|.++|+++|.+ ||+|+|++.......+... ++. +...|. .+.......+....
T Consensus 1 ril~~~~g~G~GH~~r~~ala~~L~~-g~ev~~~~~~~~~~~~~~~---------~~~~~~~~p~~~~~~~~~~~~~~~~ 70 (321)
T TIGR00661 1 KILYSVCGEGFGHTTRSVAIGEALKN-DYEVSYIASGRSKNYISKY---------GFKVFETFPGIKLKGEDGKVNIVKT 70 (321)
T ss_pred CEEEEEeccCccHHHHHHHHHHHHhC-CCeEEEEEcCCHHHhhhhh---------cCcceeccCCceEeecCCcCcHHHH
Confidence 4677665544 999999999999999 9999999987744444433 222 222210 00000001111111
Q ss_pred HHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEEeccchhHHHHHHhhcccccccCccCCCC
Q 012314 82 IEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSHG 161 (466)
Q Consensus 82 ~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 161 (466)
+..........+.+..+.+++ .+||+||+| +.+.+..+|+.+|||++.+..+... .
T Consensus 71 l~~~~~~~~~~~~~~~~~l~~---~~pDlVi~d-~~~~~~~aA~~~~iP~i~i~~q~~~------~-------------- 126 (321)
T TIGR00661 71 LRNKEYSPKKAIRREINIIRE---YNPDLIISD-FEYSTVVAAKLLKIPVICISNQNYT------R-------------- 126 (321)
T ss_pred HHhhccccHHHHHHHHHHHHh---cCCCEEEEC-CchHHHHHHHhcCCCEEEEecchhh------c--------------
Confidence 211001111234444444444 889999999 5777899999999999987653221 0
Q ss_pred CCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHHHhhcCCcc--eeccc
Q 012314 162 TPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTFPELL--PIGPL 239 (466)
Q Consensus 162 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~~~~~p~v~--~VGpl 239 (466)
.|+. + +.......+.+. .....++..++..++... ...|... .-+|.
T Consensus 127 ----------~~~~------------~--~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~----~~~p~~~~~~~~~~ 175 (321)
T TIGR00661 127 ----------YPLK------------T--DLIVYPTMAALR---IFNERCERFIVPDYPFPY----TICPKIIKNMEGPL 175 (321)
T ss_pred ----------CCcc------------c--chhHHHHHHHHH---HhccccceEeeecCCCCC----CCCccccccCCCcc
Confidence 0000 0 000000011111 111233333333322111 1111110 00111
Q ss_pred cCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCch
Q 012314 240 LASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPE 319 (466)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~ 319 (466)
.. .....+... .++.|++.+|+.. .+.+++++.+.+. +.+++.+. +...+
T Consensus 176 ~~---------------~~~~~~~~~--~~~~iLv~~g~~~------~~~l~~~l~~~~~-~~~i~~~~------~~~~~ 225 (321)
T TIGR00661 176 IR---------------YDVDDVDNY--GEDYILVYIGFEY------RYKILELLGKIAN-VKFVCYSY------EVAKN 225 (321)
T ss_pred cc---------------hhhhccccC--CCCcEEEECCcCC------HHHHHHHHHhCCC-eEEEEeCC------CCCcc
Confidence 11 011122221 2457788788742 2455677766653 23333222 11111
Q ss_pred hHHHHhcCCceeecccc--hhhhhcCCCcccceeccCCchhhhhhhcCcceeeccccc--chhhhHHHHHHhhhceeEee
Q 012314 320 GFQERVAARGQMISWAP--QLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFG--DQFLNERYICDFWKVGLKFD 395 (466)
Q Consensus 320 ~~~~~~~~n~~~~~~~p--~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~--DQ~~~a~rv~~~~G~G~~l~ 395 (466)
..++|+.+.+|.| ..++|..+++ +|||||++|++|++++|+|+|++|... ||..||+.+++ .|+|+.+.
T Consensus 226 ----~~~~~v~~~~~~~~~~~~~l~~ad~--vI~~~G~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~-~g~~~~l~ 298 (321)
T TIGR00661 226 ----SYNENVEIRRITTDNFKELIKNAEL--VITHGGFSLISEALSLGKPLIVIPDLGQFEQGNNAVKLED-LGCGIALE 298 (321)
T ss_pred ----ccCCCEEEEECChHHHHHHHHhCCE--EEECCChHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHH-CCCEEEcC
Confidence 2357888889997 3457755555 999999999999999999999999854 99999999999 59999996
Q ss_pred cCCCCCcCHHHHHHHHHHHhcCHHHH
Q 012314 396 RDEGGIITREEIKNKVDQVLGNQDFK 421 (466)
Q Consensus 396 ~~~~~~~~~~~l~~~i~~ll~~~~~r 421 (466)
. .++ ++.+++.++++|+.|+
T Consensus 299 ~---~~~---~~~~~~~~~~~~~~~~ 318 (321)
T TIGR00661 299 Y---KEL---RLLEAILDIRNMKRYK 318 (321)
T ss_pred h---hhH---HHHHHHHhcccccccc
Confidence 4 333 6677777777777654
|
This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases. |
| >COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.9e-21 Score=179.57 Aligned_cols=323 Identities=16% Similarity=0.164 Sum_probs=198.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCC-EEEEEeCCc-chHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCC-ccHHH
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGF-RVTFVNTDY-NHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDR-NDLGK 80 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~rGh-~Vt~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 80 (466)
++|++...++.||+.|.++++++|.++|+ +|.++.+.. .+..+.+. .++.++.++.+-...... .....
T Consensus 1 ~~ivl~~gGTGGHv~pAlAl~~~l~~~g~~~v~~~~~~~~~e~~l~~~--------~~~~~~~I~~~~~~~~~~~~~~~~ 72 (357)
T COG0707 1 KKIVLTAGGTGGHVFPALALAEELAKRGWEQVIVLGTGDGLEAFLVKQ--------YGIEFELIPSGGLRRKGSLKLLKA 72 (357)
T ss_pred CeEEEEeCCCccchhHHHHHHHHHHhhCccEEEEecccccceeeeccc--------cCceEEEEecccccccCcHHHHHH
Confidence 36788888888999999999999999999 688885544 33333332 367888877543333211 11211
Q ss_pred HHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCch--hHHHHHHHcCCceEEeccchhHHHHHHhhcccccccCccC
Q 012314 81 LIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIG--WSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIID 158 (466)
Q Consensus 81 ~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~ 158 (466)
.+..+. .....++++++ .+||+||....+. .+..+|..+|||.+..-..
T Consensus 73 ~~~~~~--~~~~a~~il~~------~kPd~vig~Ggyvs~P~~~Aa~~~~iPv~ihEqn--------------------- 123 (357)
T COG0707 73 PFKLLK--GVLQARKILKK------LKPDVVIGTGGYVSGPVGIAAKLLGIPVIIHEQN--------------------- 123 (357)
T ss_pred HHHHHH--HHHHHHHHHHH------cCCCEEEecCCccccHHHHHHHhCCCCEEEEecC---------------------
Confidence 222221 23345566666 8999999966544 6778899999999983211
Q ss_pred CCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHHHhhcCCcceec-
Q 012314 159 SHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTFPELLPIG- 237 (466)
Q Consensus 159 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~~~~~p~v~~VG- 237 (466)
.++|.. .+++. ..++.+...... .+. ..-..++..+|
T Consensus 124 ------------~~~G~a---------------------nk~~~------~~a~~V~~~f~~-~~~--~~~~~~~~~tG~ 161 (357)
T COG0707 124 ------------AVPGLA---------------------NKILS------KFAKKVASAFPK-LEA--GVKPENVVVTGI 161 (357)
T ss_pred ------------CCcchh---------------------HHHhH------Hhhceeeecccc-ccc--cCCCCceEEecC
Confidence 111111 11110 122222222221 110 11112577777
Q ss_pred cccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCH-HHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCC
Q 012314 238 PLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQ-VQFQELALGLELCKRPFLWVVRPDITTDANDR 316 (466)
Q Consensus 238 pl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~-~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~ 316 (466)
|+..+-... +..-..+.. ..++++|+|.-||.+.... +.+......+.+ ...+++.++.+ .
T Consensus 162 Pvr~~~~~~---------~~~~~~~~~-~~~~~~ilV~GGS~Ga~~ln~~v~~~~~~l~~-~~~v~~~~G~~-------~ 223 (357)
T COG0707 162 PVRPEFEEL---------PAAEVRKDG-RLDKKTILVTGGSQGAKALNDLVPEALAKLAN-RIQVIHQTGKN-------D 223 (357)
T ss_pred cccHHhhcc---------chhhhhhhc-cCCCcEEEEECCcchhHHHHHHHHHHHHHhhh-CeEEEEEcCcc-------h
Confidence 555432210 000001111 1156799999998753221 122222222222 45677777655 1
Q ss_pred CchhHHHHh-cCC-ceeecccchhh-hhcCCCcccceeccCCchhhhhhhcCcceeecccc----cchhhhHHHHHHhhh
Q 012314 317 YPEGFQERV-AAR-GQMISWAPQLR-VLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYF----GDQFLNERYICDFWK 389 (466)
Q Consensus 317 ~~~~~~~~~-~~n-~~~~~~~p~~~-ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~----~DQ~~~a~rv~~~~G 389 (466)
.+.+.... ..+ +.+..|++.+. ++.-+++ +||++|++|+.|+++.|+|+|.+|.- .+|..||..++++ |
T Consensus 224 -~~~~~~~~~~~~~~~v~~f~~dm~~~~~~ADL--vIsRaGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~~~-g 299 (357)
T COG0707 224 -LEELKSAYNELGVVRVLPFIDDMAALLAAADL--VISRAGALTIAELLALGVPAILVPYPPGADGHQEYNAKFLEKA-G 299 (357)
T ss_pred -HHHHHHHHhhcCcEEEeeHHhhHHHHHHhccE--EEeCCcccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHHHhC-C
Confidence 22222222 233 66779998764 8977776 99999999999999999999999973 4899999999995 9
Q ss_pred ceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 012314 390 VGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALELKEKAMS 433 (466)
Q Consensus 390 ~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~~ 433 (466)
.|..+.. .++|.++|.+.|.+++++ .++..+|++..++
T Consensus 300 aa~~i~~---~~lt~~~l~~~i~~l~~~---~~~l~~m~~~a~~ 337 (357)
T COG0707 300 AALVIRQ---SELTPEKLAELILRLLSN---PEKLKAMAENAKK 337 (357)
T ss_pred CEEEecc---ccCCHHHHHHHHHHHhcC---HHHHHHHHHHHHh
Confidence 9999984 779999999999999987 4445555555554
|
|
| >PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.9e-20 Score=176.98 Aligned_cols=326 Identities=15% Similarity=0.144 Sum_probs=190.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCccHHHHHH
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKLIE 83 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (466)
+||+|...+..||...++.++++|.++||+|++++........ . ....+++++.++..-... ......+.
T Consensus 2 ~~i~i~~~g~gG~~~~~~~la~~L~~~g~ev~vv~~~~~~~~~-~------~~~~g~~~~~~~~~~~~~---~~~~~~l~ 71 (357)
T PRK00726 2 KKILLAGGGTGGHVFPALALAEELKKRGWEVLYLGTARGMEAR-L------VPKAGIEFHFIPSGGLRR---KGSLANLK 71 (357)
T ss_pred cEEEEEcCcchHhhhHHHHHHHHHHhCCCEEEEEECCCchhhh-c------cccCCCcEEEEeccCcCC---CChHHHHH
Confidence 7899999888899999999999999999999999986521110 0 001256666655311111 11111111
Q ss_pred HHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCc--hhHHHHHHHcCCceEEeccchhHHHHHHhhcccccccCccCCCC
Q 012314 84 KCLQVMPGKLEELIEEINSREDEKIDCFIADGNI--GWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSHG 161 (466)
Q Consensus 84 ~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~--~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 161 (466)
.... ....+..+.+.+++ .+||+|++.... ..+..++...++|++.......
T Consensus 72 ~~~~-~~~~~~~~~~~ik~---~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~~---------------------- 125 (357)
T PRK00726 72 APFK-LLKGVLQARKILKR---FKPDVVVGFGGYVSGPGGLAARLLGIPLVIHEQNAV---------------------- 125 (357)
T ss_pred HHHH-HHHHHHHHHHHHHh---cCCCEEEECCCcchhHHHHHHHHcCCCEEEEcCCCC----------------------
Confidence 1111 12223333333333 789999999632 2455667788999986321000
Q ss_pred CCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHHHhhcCCcceeccccC
Q 012314 162 TPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTFPELLPIGPLLA 241 (466)
Q Consensus 162 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~~~~~p~v~~VGpl~~ 241 (466)
+ . ...++.. ..+|.++..+...+. ..-..+++++|....
T Consensus 126 -----------~------------~---------~~~r~~~------~~~d~ii~~~~~~~~---~~~~~~i~vi~n~v~ 164 (357)
T PRK00726 126 -----------P------------G---------LANKLLA------RFAKKVATAFPGAFP---EFFKPKAVVTGNPVR 164 (357)
T ss_pred -----------c------------c---------HHHHHHH------HHhchheECchhhhh---ccCCCCEEEECCCCC
Confidence 0 0 0011111 134444444432221 112357777774443
Q ss_pred CCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhCCC--CEEEEEcCCCCCCCCCCCch
Q 012314 242 SNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKR--PFLWVVRPDITTDANDRYPE 319 (466)
Q Consensus 242 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~--~~i~~~~~~~~~~~~~~~~~ 319 (466)
..... .... ..-....++.++|++..|+.. .......+.+++.++.. .+++.++.. . .+
T Consensus 165 ~~~~~------~~~~---~~~~~~~~~~~~i~~~gg~~~--~~~~~~~l~~a~~~~~~~~~~~~~~G~g----~----~~ 225 (357)
T PRK00726 165 EEILA------LAAP---PARLAGREGKPTLLVVGGSQG--ARVLNEAVPEALALLPEALQVIHQTGKG----D----LE 225 (357)
T ss_pred hHhhc------ccch---hhhccCCCCCeEEEEECCcHh--HHHHHHHHHHHHHHhhhCcEEEEEcCCC----c----HH
Confidence 32211 0000 001111223446666444431 12222333366654443 345555654 1 12
Q ss_pred hHHHH--hcCCceeecccc-hhhhhcCCCcccceeccCCchhhhhhhcCcceeeccc----ccchhhhHHHHHHhhhcee
Q 012314 320 GFQER--VAARGQMISWAP-QLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPY----FGDQFLNERYICDFWKVGL 392 (466)
Q Consensus 320 ~~~~~--~~~n~~~~~~~p-~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~----~~DQ~~~a~rv~~~~G~G~ 392 (466)
.+.+. ..-++.+.+|+. ..+++..+++ +|+|+|.++++||+++|+|+|++|. ..||..++..+.+ .|.|.
T Consensus 226 ~~~~~~~~~~~v~~~g~~~~~~~~~~~~d~--~i~~~g~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~-~~~g~ 302 (357)
T PRK00726 226 EVRAAYAAGINAEVVPFIDDMAAAYAAADL--VICRAGASTVAELAAAGLPAILVPLPHAADDHQTANARALVD-AGAAL 302 (357)
T ss_pred HHHHHhhcCCcEEEeehHhhHHHHHHhCCE--EEECCCHHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHH-CCCEE
Confidence 22222 222366779984 4679977666 9999999999999999999999997 4689999999999 59999
Q ss_pred EeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 012314 393 KFDRDEGGIITREEIKNKVDQVLGNQDFKARALELKEKA 431 (466)
Q Consensus 393 ~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~ 431 (466)
.+.. +.++++.|+++|.++++|+++++++.+-+++.
T Consensus 303 ~~~~---~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~ 338 (357)
T PRK00726 303 LIPQ---SDLTPEKLAEKLLELLSDPERLEAMAEAARAL 338 (357)
T ss_pred EEEc---ccCCHHHHHHHHHHHHcCHHHHHHHHHHHHhc
Confidence 9975 56789999999999999988887666655444
|
|
| >cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Probab=99.84 E-value=7.3e-19 Score=169.10 Aligned_cols=321 Identities=15% Similarity=0.127 Sum_probs=188.9
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCC-CCCCCCCccHHHHHH
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDG-MEPWEDRNDLGKLIE 83 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 83 (466)
+|++.+.+..||......+++.|.++||+|++++....... ... ...+++++.++.. .............+.
T Consensus 1 ~~~~~~~~~gG~~~~~~~la~~l~~~G~ev~v~~~~~~~~~-~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (350)
T cd03785 1 RILIAGGGTGGHIFPALALAEELRERGAEVLFLGTKRGLEA-RLV------PKAGIPLHTIPVGGLRRKGSLKKLKAPFK 73 (350)
T ss_pred CEEEEecCchhhhhHHHHHHHHHHhCCCEEEEEECCCcchh-hcc------cccCCceEEEEecCcCCCChHHHHHHHHH
Confidence 57888888889999999999999999999999988643211 100 0124666666532 111111111111111
Q ss_pred HHHHhccHHHHHHHHHHhcCCCCCccEEEeCCC--chhHHHHHHHcCCceEEeccchhHHHHHHhhcccccccCccCCCC
Q 012314 84 KCLQVMPGKLEELIEEINSREDEKIDCFIADGN--IGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSHG 161 (466)
Q Consensus 84 ~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~--~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 161 (466)
. .. ....+.+++++ .+||+|++... ...+..+|...|+|++......
T Consensus 74 ~-~~-~~~~~~~~i~~------~~pDvI~~~~~~~~~~~~~~a~~~~~p~v~~~~~~----------------------- 122 (350)
T cd03785 74 L-LK-GVLQARKILKK------FKPDVVVGFGGYVSGPVGLAAKLLGIPLVIHEQNA----------------------- 122 (350)
T ss_pred H-HH-HHHHHHHHHHh------cCCCEEEECCCCcchHHHHHHHHhCCCEEEEcCCC-----------------------
Confidence 1 11 11234444444 78999998753 2356677888899988632100
Q ss_pred CCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHHHhhcCCcceeccccC
Q 012314 162 TPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTFPELLPIGPLLA 241 (466)
Q Consensus 162 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~~~~~p~v~~VGpl~~ 241 (466)
.+ . ...++. ...++.+++.+....+. -...++.++|....
T Consensus 123 ----------~~------------~---------~~~~~~------~~~~~~vi~~s~~~~~~---~~~~~~~~i~n~v~ 162 (350)
T cd03785 123 ----------VP------------G---------LANRLL------ARFADRVALSFPETAKY---FPKDKAVVTGNPVR 162 (350)
T ss_pred ----------Cc------------c---------HHHHHH------HHhhCEEEEcchhhhhc---CCCCcEEEECCCCc
Confidence 00 0 001111 12366777766554332 11246677775443
Q ss_pred CCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHh---CCCCEEEEEcCCCCCCCCCCCc
Q 012314 242 SNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLEL---CKRPFLWVVRPDITTDANDRYP 318 (466)
Q Consensus 242 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~---~~~~~i~~~~~~~~~~~~~~~~ 318 (466)
..... +.+ . .......+++.+|++..|+... ......+.+++.. .+..+++.++.+ ..
T Consensus 163 ~~~~~-------~~~-~-~~~~~~~~~~~~i~~~~g~~~~--~~~~~~l~~a~~~l~~~~~~~~~i~G~g--------~~ 223 (350)
T cd03785 163 EEILA-------LDR-E-RARLGLRPGKPTLLVFGGSQGA--RAINEAVPEALAELLRKRLQVIHQTGKG--------DL 223 (350)
T ss_pred hHHhh-------hhh-h-HHhcCCCCCCeEEEEECCcHhH--HHHHHHHHHHHHHhhccCeEEEEEcCCc--------cH
Confidence 22110 000 0 1222222334466665555421 1222223344333 334455566544 11
Q ss_pred hhHHHHh---cCCceeeccc-chhhhhcCCCcccceeccCCchhhhhhhcCcceeeccc----ccchhhhHHHHHHhhhc
Q 012314 319 EGFQERV---AARGQMISWA-PQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPY----FGDQFLNERYICDFWKV 390 (466)
Q Consensus 319 ~~~~~~~---~~n~~~~~~~-p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~----~~DQ~~~a~rv~~~~G~ 390 (466)
+.+.+.. .+|+.+.+|+ +..++|..+++ +|+++|.+++.||+++|+|+|++|. ..+|..++..+.+ .|.
T Consensus 224 ~~l~~~~~~~~~~v~~~g~~~~~~~~l~~ad~--~v~~sg~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~~l~~-~g~ 300 (350)
T cd03785 224 EEVKKAYEELGVNYEVFPFIDDMAAAYAAADL--VISRAGASTVAELAALGLPAILIPLPYAADDHQTANARALVK-AGA 300 (350)
T ss_pred HHHHHHHhccCCCeEEeehhhhHHHHHHhcCE--EEECCCHhHHHHHHHhCCCEEEeecCCCCCCcHHHhHHHHHh-CCC
Confidence 2232222 3688888998 44579977666 9999999999999999999999986 4678999999998 599
Q ss_pred eeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHH
Q 012314 391 GLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALELK 428 (466)
Q Consensus 391 G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~ 428 (466)
|..+.. ...+.++|.++|.++++|++.++++.+-+
T Consensus 301 g~~v~~---~~~~~~~l~~~i~~ll~~~~~~~~~~~~~ 335 (350)
T cd03785 301 AVLIPQ---EELTPERLAAALLELLSDPERLKAMAEAA 335 (350)
T ss_pred EEEEec---CCCCHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 999974 45689999999999999887766554433
|
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >COG4671 Predicted glycosyl transferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.84 E-value=6.2e-19 Score=156.96 Aligned_cols=325 Identities=15% Similarity=0.120 Sum_probs=205.6
Q ss_pred CCEEEEEcCC--CccCHHHHHHHHHHHHhC--CCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCC---CC
Q 012314 3 RPRVLVMPAP--AQGHVIPLLEFSQCLAKH--GFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWE---DR 75 (466)
Q Consensus 3 ~~~il~~~~~--~~GH~~p~l~la~~L~~r--Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 75 (466)
.+||+|++.- |-||+.+++.||++|++. |.+|++++.......+.- ..+++++.+|.-...++ ..
T Consensus 9 ~~Ri~~Yshd~~GlGHlrR~~~Ia~aLv~d~~~~~Il~IsG~~~~~~F~~--------~~gVd~V~LPsl~k~~~G~~~~ 80 (400)
T COG4671 9 RPRILFYSHDLLGLGHLRRALRIAHALVEDYLGFDILIISGGPPAGGFPG--------PAGVDFVKLPSLIKGDNGEYGL 80 (400)
T ss_pred cceEEEEehhhccchHHHHHHHHHHHHhhcccCceEEEEeCCCccCCCCC--------cccCceEecCceEecCCCceee
Confidence 4599999955 569999999999999998 999999999866554432 35899999995333221 01
Q ss_pred ccHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCchhHH-----HHHH--HcCCceEEeccchhHHHHHHhhc
Q 012314 76 NDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSM-----EIAK--KMNVRGAVFWPSSAASVALVFRI 148 (466)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~-----~~A~--~lgiP~v~~~~~~~~~~~~~~~~ 148 (466)
.+...-.+.+.+.-...+.+..+. .+||++|+|.+.+... .++. ..+-+++...
T Consensus 81 ~d~~~~l~e~~~~Rs~lil~t~~~------fkPDi~IVd~~P~Glr~EL~ptL~yl~~~~t~~vL~l------------- 141 (400)
T COG4671 81 VDLDGDLEETKKLRSQLILSTAET------FKPDIFIVDKFPFGLRFELLPTLEYLKTTGTRLVLGL------------- 141 (400)
T ss_pred eecCCCHHHHHHHHHHHHHHHHHh------cCCCEEEEeccccchhhhhhHHHHHHhhcCCcceeeh-------------
Confidence 111111334433333344445555 8999999998544310 1111 1111111100
Q ss_pred ccccccCccCCCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHHHh
Q 012314 149 PKLIDDGIIDSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFT 228 (466)
Q Consensus 149 p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~~~ 228 (466)
-..++.+ .........+.....+. ...|.+++...|.|-.+...
T Consensus 142 -----------------------------r~i~D~p-~~~~~~w~~~~~~~~I~------r~yD~V~v~GdP~f~d~~~~ 185 (400)
T COG4671 142 -----------------------------RSIRDIP-QELEADWRRAETVRLIN------RFYDLVLVYGDPDFYDPLTE 185 (400)
T ss_pred -----------------------------Hhhhhch-hhhccchhhhHHHHHHH------HhheEEEEecCccccChhhc
Confidence 0011222 11222222222222222 35578888888876543222
Q ss_pred h------cCCcceeccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHh-CCCC-
Q 012314 229 T------FPELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLEL-CKRP- 300 (466)
Q Consensus 229 ~------~p~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~-~~~~- 300 (466)
+ -..+.|+|.+ ..+-+.. +.+ |... +++.-|+||-|. +....+++...+.|-.. .+.+
T Consensus 186 ~~~~~~i~~k~~ytG~v-q~~~~~~------~~p-----~~~~-pE~~~Ilvs~GG-G~dG~eLi~~~l~A~~~l~~l~~ 251 (400)
T COG4671 186 FPFAPAIRAKMRYTGFV-QRSLPHL------PLP-----PHEA-PEGFDILVSVGG-GADGAELIETALAAAQLLAGLNH 251 (400)
T ss_pred CCccHhhhhheeEeEEe-eccCcCC------CCC-----CcCC-CccceEEEecCC-ChhhHHHHHHHHHHhhhCCCCCc
Confidence 1 2488999998 2221110 011 1111 345589999986 44556777777777543 3444
Q ss_pred -EEEEEcCCCCCCCCCCCchhHHH----Hhc--CCceeecccchh-hhhcCCCcccceeccCCchhhhhhhcCcceeecc
Q 012314 301 -FLWVVRPDITTDANDRYPEGFQE----RVA--ARGQMISWAPQL-RVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWP 372 (466)
Q Consensus 301 -~i~~~~~~~~~~~~~~~~~~~~~----~~~--~n~~~~~~~p~~-~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P 372 (466)
.+.+++.. .|+...+ ..+ +++.+..|-.+. .++..++. +|+-||+||++|-|++|||.|++|
T Consensus 252 ~~~ivtGP~--------MP~~~r~~l~~~A~~~p~i~I~~f~~~~~~ll~gA~~--vVSm~GYNTvCeILs~~k~aLivP 321 (400)
T COG4671 252 KWLIVTGPF--------MPEAQRQKLLASAPKRPHISIFEFRNDFESLLAGARL--VVSMGGYNTVCEILSFGKPALIVP 321 (400)
T ss_pred ceEEEeCCC--------CCHHHHHHHHHhcccCCCeEEEEhhhhHHHHHHhhhe--eeecccchhhhHHHhCCCceEEec
Confidence 55555544 5544333 334 778888988775 59966666 999999999999999999999999
Q ss_pred ccc---chhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCH
Q 012314 373 YFG---DQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQ 418 (466)
Q Consensus 373 ~~~---DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~ 418 (466)
... ||...|.|+++ ||+--++.+ ++++++.|+++|...++-+
T Consensus 322 r~~p~eEQliRA~Rl~~-LGL~dvL~p---e~lt~~~La~al~~~l~~P 366 (400)
T COG4671 322 RAAPREEQLIRAQRLEE-LGLVDVLLP---ENLTPQNLADALKAALARP 366 (400)
T ss_pred cCCCcHHHHHHHHHHHh-cCcceeeCc---ccCChHHHHHHHHhcccCC
Confidence 864 99999999999 899999997 8899999999999999733
|
|
| >TIGR00215 lpxB lipid-A-disaccharide synthase | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.5e-17 Score=160.42 Aligned_cols=351 Identities=12% Similarity=-0.006 Sum_probs=198.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCccHHHHHH
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKLIE 83 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (466)
.||++.+.+..||++|. +|+++|.++|++|+|++.... .+++.+.. ..+.+..++- ..+.+.+.
T Consensus 6 ~ki~i~aGgtsGhi~pa-al~~~l~~~~~~~~~~g~gg~--~m~~~g~~-----~~~~~~~l~v--------~G~~~~l~ 69 (385)
T TIGR00215 6 PTIALVAGEASGDILGA-GLRQQLKEHYPNARFIGVAGP--RMAAEGCE-----VLYSMEELSV--------MGLREVLG 69 (385)
T ss_pred CeEEEEeCCccHHHHHH-HHHHHHHhcCCCcEEEEEccH--HHHhCcCc-----cccChHHhhh--------ccHHHHHH
Confidence 58899998888999999 999999999999999997532 34433210 1233333321 11111111
Q ss_pred HHHHhccHHHHHHHHHHhcCCCCCccEEEeCCC-chh--HHHHHHHcCCceEEecc-chhHHHHHHhhcccccccCccCC
Q 012314 84 KCLQVMPGKLEELIEEINSREDEKIDCFIADGN-IGW--SMEIAKKMNVRGAVFWP-SSAASVALVFRIPKLIDDGIIDS 159 (466)
Q Consensus 84 ~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~-~~~--~~~~A~~lgiP~v~~~~-~~~~~~~~~~~~p~~~~~~~~~~ 159 (466)
.+ ......++++.+.+++ .+||+||.-.. ... ....|+.+|||++.+.+ ..+
T Consensus 70 ~~-~~~~~~~~~~~~~l~~---~kPd~vi~~g~~~~~~~~a~aa~~~gip~v~~i~P~~w-------------------- 125 (385)
T TIGR00215 70 RL-GRLLKIRKEVVQLAKQ---AKPDLLVGIDAPDFNLTKELKKKDPGIKIIYYISPQVW-------------------- 125 (385)
T ss_pred HH-HHHHHHHHHHHHHHHh---cCCCEEEEeCCCCccHHHHHHHhhCCCCEEEEeCCcHh--------------------
Confidence 11 1112223344444444 89999997443 222 33378899999987531 111
Q ss_pred CCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHHHhhcCCcceeccc
Q 012314 160 HGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTFPELLPIGPL 239 (466)
Q Consensus 160 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~~~~~p~v~~VGpl 239 (466)
-| ...+++.+. ..+|.+++.+..+-+.. ....-++.+||.-
T Consensus 126 --------------------------aw--~~~~~r~l~----------~~~d~v~~~~~~e~~~~-~~~g~~~~~vGnP 166 (385)
T TIGR00215 126 --------------------------AW--RKWRAKKIE----------KATDFLLAILPFEKAFY-QKKNVPCRFVGHP 166 (385)
T ss_pred --------------------------hc--CcchHHHHH----------HHHhHhhccCCCcHHHH-HhcCCCEEEECCc
Confidence 00 011111111 23445555554433322 1222356678833
Q ss_pred cCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhC-----CCCEEEEEcCCCCCCCC
Q 012314 240 LASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELC-----KRPFLWVVRPDITTDAN 314 (466)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~-----~~~~i~~~~~~~~~~~~ 314 (466)
..+.... ..+...+...-+.-.+++++|.+--||....-......+++++..+ +.++++...... .
T Consensus 167 v~~~~~~-----~~~~~~~~r~~lgl~~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~~vi~~~~~~----~ 237 (385)
T TIGR00215 167 LLDAIPL-----YKPDRKSAREKLGIDHNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLRRVLPVVNFK----R 237 (385)
T ss_pred hhhhccc-----cCCCHHHHHHHcCCCCCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeEEEEEeCCch----h
Confidence 2221110 0011111122222234456788877776332133455555554332 234544443220 0
Q ss_pred CCCchhHHHHhcCCceeeccc-chhhhhcCCCcccceeccCCchhhhhhhcCcceeec----cccc---------chhhh
Q 012314 315 DRYPEGFQERVAARGQMISWA-PQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCW----PYFG---------DQFLN 380 (466)
Q Consensus 315 ~~~~~~~~~~~~~n~~~~~~~-p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~----P~~~---------DQ~~~ 380 (466)
...-+.+.+....+..+.-+. +...++..+++ +|+-+|..|+ |++++|+|+|++ |+.. .|..|
T Consensus 238 ~~~~~~~~~~~~~~~~v~~~~~~~~~~l~aADl--~V~~SGt~tl-Ea~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~ 314 (385)
T TIGR00215 238 RLQFEQIKAEYGPDLQLHLIDGDARKAMFAADA--ALLASGTAAL-EAALIKTPMVVGYRMKPLTFLIARRLVKTDYISL 314 (385)
T ss_pred HHHHHHHHHHhCCCCcEEEECchHHHHHHhCCE--EeecCCHHHH-HHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeec
Confidence 000011222222222332221 23458877776 9999999887 999999999999 8642 38889
Q ss_pred HHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCH----HHHHHHHHHHHHHHHHHhcCCCcHHHHHHHH
Q 012314 381 ERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQ----DFKARALELKEKAMSSVREGGSSYKTFQNFL 449 (466)
Q Consensus 381 a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~----~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v 449 (466)
+..+... ++...+. .++.|++.|.+.+.++|+|+ +++++.+.--+++++.+.++|.+.+..+.++
T Consensus 315 ~nil~~~-~~~pel~---q~~~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~i~ 383 (385)
T TIGR00215 315 PNILANR-LLVPELL---QEECTPHPLAIALLLLLENGLKAYKEMHRERQFFEELRQRIYCNADSERAAQAVL 383 (385)
T ss_pred cHHhcCC-ccchhhc---CCCCCHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHh
Confidence 9999985 9888886 37899999999999999998 8888777777777777766777766555444
|
Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA |
| >TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.2e-16 Score=151.79 Aligned_cols=315 Identities=17% Similarity=0.172 Sum_probs=174.8
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCccHHHHHHH
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKLIEK 84 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (466)
||+|++.+..||+.....|+++|.++||+|++++.+..... .. ....+++++.++..-.. .......+..
T Consensus 2 ~i~~~~g~~~g~~~~~~~La~~L~~~g~eV~vv~~~~~~~~--~~-----~~~~g~~~~~i~~~~~~---~~~~~~~l~~ 71 (348)
T TIGR01133 2 KVVLAAGGTGGHIFPALAVAEELIKRGVEVLWLGTKRGLEK--RL-----VPKAGIEFYFIPVGGLR---RKGSFRLIKT 71 (348)
T ss_pred eEEEEeCccHHHHhHHHHHHHHHHhCCCEEEEEeCCCcchh--cc-----cccCCCceEEEeccCcC---CCChHHHHHH
Confidence 79999989899999888999999999999999987432110 00 00135666665521111 1111111111
Q ss_pred HHHh--ccHHHHHHHHHHhcCCCCCccEEEeCCCch--hHHHHHHHcCCceEEeccchhHHHHHHhhcccccccCccCCC
Q 012314 85 CLQV--MPGKLEELIEEINSREDEKIDCFIADGNIG--WSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSH 160 (466)
Q Consensus 85 ~~~~--~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 160 (466)
.... ....+.++++. .+||+|++..... .+..++..+++|.+.+... .
T Consensus 72 ~~~~~~~~~~l~~~i~~------~~pDvVi~~~~~~~~~~~~~~~~~~~p~v~~~~~-~--------------------- 123 (348)
T TIGR01133 72 PLKLLKAVFQARRILKK------FKPDAVIGFGGYVSGPAGLAAKLLGIPLFHHEQN-A--------------------- 123 (348)
T ss_pred HHHHHHHHHHHHHHHHh------cCCCEEEEcCCcccHHHHHHHHHcCCCEEEECCC-C---------------------
Confidence 1111 11223444444 8899999975332 3555788889998742100 0
Q ss_pred CCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHHHhhcCCcceecccc
Q 012314 161 GTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTFPELLPIGPLL 240 (466)
Q Consensus 161 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~~~~~p~v~~VGpl~ 240 (466)
.+ ....+++ ...+|.+++.+...-+. . ...+||.-.
T Consensus 124 -----------~~---------------------~~~~~~~------~~~~d~ii~~~~~~~~~-----~-~~~~i~n~v 159 (348)
T TIGR01133 124 -----------VP---------------------GLTNKLL------SRFAKKVLISFPGAKDH-----F-EAVLVGNPV 159 (348)
T ss_pred -----------Cc---------------------cHHHHHH------HHHhCeeEECchhHhhc-----C-CceEEcCCc
Confidence 00 0001111 12456666655432221 1 224555322
Q ss_pred CCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHH---hCCCCEEEEEcCCCCCCCCCCC
Q 012314 241 ASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLE---LCKRPFLWVVRPDITTDANDRY 317 (466)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~---~~~~~~i~~~~~~~~~~~~~~~ 317 (466)
...... .+.. ...+...+++++|.+..|+.. .......+.++++ ..+.++++..++. ..
T Consensus 160 ~~~~~~------~~~~---~~~~~~~~~~~~i~~~gg~~~--~~~~~~~l~~a~~~l~~~~~~~~~~~g~~-------~~ 221 (348)
T TIGR01133 160 RQEIRS------LPVP---RERFGLREGKPTILVLGGSQG--AKILNELVPKALAKLAEKGIQIVHQTGKN-------DL 221 (348)
T ss_pred CHHHhc------ccch---hhhcCCCCCCeEEEEECCchh--HHHHHHHHHHHHHHHhhcCcEEEEECCcc-------hH
Confidence 211100 0000 012222223344544334432 1222222334443 3345565544433 11
Q ss_pred chhHHHHhcC-C-ceeeccc--chhhhhcCCCcccceeccCCchhhhhhhcCcceeecccc---cchhhhHHHHHHhhhc
Q 012314 318 PEGFQERVAA-R-GQMISWA--PQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYF---GDQFLNERYICDFWKV 390 (466)
Q Consensus 318 ~~~~~~~~~~-n-~~~~~~~--p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~---~DQ~~~a~rv~~~~G~ 390 (466)
+.+.+...+ + ..++.|. +...+|..+++ +|+++|.+++.||+++|+|+|++|.. .+|..++..+.+ .|.
T Consensus 222 -~~l~~~~~~~~l~~~v~~~~~~~~~~l~~ad~--~v~~~g~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~-~~~ 297 (348)
T TIGR01133 222 -EKVKNVYQELGIEAIVTFIDENMAAAYAAADL--VISRAGASTVAELAAAGVPAILIPYPYAADDQYYNAKFLED-LGA 297 (348)
T ss_pred -HHHHHHHhhCCceEEecCcccCHHHHHHhCCE--EEECCChhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHH-CCC
Confidence 233322221 1 1233344 45678977776 99999988999999999999999874 467889999998 599
Q ss_pred eeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHH
Q 012314 391 GLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALE 426 (466)
Q Consensus 391 G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~ 426 (466)
|..+.. ...++++|.+++.++++|++.+++..+
T Consensus 298 G~~~~~---~~~~~~~l~~~i~~ll~~~~~~~~~~~ 330 (348)
T TIGR01133 298 GLVIRQ---KELLPEKLLEALLKLLLDPANLEAMAE 330 (348)
T ss_pred EEEEec---ccCCHHHHHHHHHHHHcCHHHHHHHHH
Confidence 999864 556899999999999999877765443
|
RL J Bacteriol 1993 Mar;175(6):1841-3 |
| >PRK13609 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.7e-15 Score=147.13 Aligned_cols=141 Identities=14% Similarity=0.216 Sum_probs=100.0
Q ss_pred CCeEEEEEeccccccCHHHHHHHHHHHHhC-CCCEEEEEcCCCCCCCCCCCchhHHHH---hcCCceeecccchh-hhhc
Q 012314 268 PSSVVYVSFGSFTILDQVQFQELALGLELC-KRPFLWVVRPDITTDANDRYPEGFQER---VAARGQMISWAPQL-RVLN 342 (466)
Q Consensus 268 ~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~---~~~n~~~~~~~p~~-~ll~ 342 (466)
++++|++..|+.... ..+..+++++.+. +.+++++.+.+ ..+.+.+.+. .++|+.+.+|+++. +++.
T Consensus 201 ~~~~il~~~G~~~~~--k~~~~li~~l~~~~~~~~viv~G~~------~~~~~~l~~~~~~~~~~v~~~g~~~~~~~l~~ 272 (380)
T PRK13609 201 NKKILLIMAGAHGVL--GNVKELCQSLMSVPDLQVVVVCGKN------EALKQSLEDLQETNPDALKVFGYVENIDELFR 272 (380)
T ss_pred CCcEEEEEcCCCCCC--cCHHHHHHHHhhCCCcEEEEEeCCC------HHHHHHHHHHHhcCCCcEEEEechhhHHHHHH
Confidence 355777766765421 2345666666543 45666666543 1122333222 23578888999874 6998
Q ss_pred CCCcccceeccCCchhhhhhhcCcceeec-ccccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCHHHH
Q 012314 343 HPSIACFLSHCGWNSTMEGVSNGIPFLCW-PYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFK 421 (466)
Q Consensus 343 ~~~~~~~i~hgG~~s~~eal~~GvP~l~~-P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r 421 (466)
.+++ +|+.+|..|+.||+++|+|+|+. |..+.|..|+..+.+ .|.|+... +.++|.++|.++++|++.+
T Consensus 273 ~aD~--~v~~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~-~G~~~~~~-------~~~~l~~~i~~ll~~~~~~ 342 (380)
T PRK13609 273 VTSC--MITKPGGITLSEAAALGVPVILYKPVPGQEKENAMYFER-KGAAVVIR-------DDEEVFAKTEALLQDDMKL 342 (380)
T ss_pred hccE--EEeCCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHh-CCcEEEEC-------CHHHHHHHHHHHHCCHHHH
Confidence 8877 99999988999999999999985 667777889988888 49888652 5799999999999998776
Q ss_pred HHHHH
Q 012314 422 ARALE 426 (466)
Q Consensus 422 ~~a~~ 426 (466)
++..+
T Consensus 343 ~~m~~ 347 (380)
T PRK13609 343 LQMKE 347 (380)
T ss_pred HHHHH
Confidence 65443
|
|
| >TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG | Back alignment and domain information |
|---|
Probab=99.72 E-value=9.3e-16 Score=141.18 Aligned_cols=104 Identities=15% Similarity=0.137 Sum_probs=77.3
Q ss_pred CeEEEEEeccccccCHHHHHHHHHHHHhC--CCCEEEEEcCCCCCCCCCCCchhHHHH--hcCCceeecccchh-hhhcC
Q 012314 269 SSVVYVSFGSFTILDQVQFQELALGLELC--KRPFLWVVRPDITTDANDRYPEGFQER--VAARGQMISWAPQL-RVLNH 343 (466)
Q Consensus 269 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~--~~~n~~~~~~~p~~-~ll~~ 343 (466)
.+.|+++||... .......+++++... +.++.++++.. ....+.+.+. ..+|+.+..+++++ ++|..
T Consensus 170 ~~~iLi~~GG~d--~~~~~~~~l~~l~~~~~~~~i~vv~G~~------~~~~~~l~~~~~~~~~i~~~~~~~~m~~lm~~ 241 (279)
T TIGR03590 170 LRRVLVSFGGAD--PDNLTLKLLSALAESQINISITLVTGSS------NPNLDELKKFAKEYPNIILFIDVENMAELMNE 241 (279)
T ss_pred cCeEEEEeCCcC--CcCHHHHHHHHHhccccCceEEEEECCC------CcCHHHHHHHHHhCCCEEEEeCHHHHHHHHHH
Confidence 358999999643 333455666777554 45677777765 1223333332 24688888999986 69977
Q ss_pred CCcccceeccCCchhhhhhhcCcceeecccccchhhhHHH
Q 012314 344 PSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERY 383 (466)
Q Consensus 344 ~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~r 383 (466)
+++ +||+|| +|++|+++.|+|+|++|...+|..||+.
T Consensus 242 aDl--~Is~~G-~T~~E~~a~g~P~i~i~~~~nQ~~~a~~ 278 (279)
T TIGR03590 242 ADL--AIGAAG-STSWERCCLGLPSLAICLAENQQSNSQQ 278 (279)
T ss_pred CCE--EEECCc-hHHHHHHHcCCCEEEEEecccHHHHhhh
Confidence 777 999999 9999999999999999999999999875
|
This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases. |
| >PRK13608 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=5.5e-14 Score=136.57 Aligned_cols=164 Identities=12% Similarity=0.232 Sum_probs=109.4
Q ss_pred CCeEEEEEeccccccCHHHHHHHHHHH-Hh-CCCCEEEEEcCCCCCCCCCCCchhHHHHh--cCCceeecccchh-hhhc
Q 012314 268 PSSVVYVSFGSFTILDQVQFQELALGL-EL-CKRPFLWVVRPDITTDANDRYPEGFQERV--AARGQMISWAPQL-RVLN 342 (466)
Q Consensus 268 ~~~~v~vs~Gs~~~~~~~~~~~~~~a~-~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~--~~n~~~~~~~p~~-~ll~ 342 (466)
++++|++..|+.+. ...+..+++++ .. .+.+++++.+++ ..+.+.+.+.. .+++.+.+|+++. .++.
T Consensus 201 ~~~~ilv~~G~lg~--~k~~~~li~~~~~~~~~~~~vvv~G~~------~~l~~~l~~~~~~~~~v~~~G~~~~~~~~~~ 272 (391)
T PRK13608 201 DKQTILMSAGAFGV--SKGFDTMITDILAKSANAQVVMICGKS------KELKRSLTAKFKSNENVLILGYTKHMNEWMA 272 (391)
T ss_pred CCCEEEEECCCccc--chhHHHHHHHHHhcCCCceEEEEcCCC------HHHHHHHHHHhccCCCeEEEeccchHHHHHH
Confidence 45688888887642 23445555554 22 235666666544 11223333222 3577788999764 5997
Q ss_pred CCCcccceeccCCchhhhhhhcCcceeec-ccccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCHHHH
Q 012314 343 HPSIACFLSHCGWNSTMEGVSNGIPFLCW-PYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFK 421 (466)
Q Consensus 343 ~~~~~~~i~hgG~~s~~eal~~GvP~l~~-P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r 421 (466)
.+++ +|+..|..|+.||+++|+|+|++ |..+.|..|+..+.+ .|+|+... +.+++.++|.++++|++.+
T Consensus 273 ~aDl--~I~k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~-~G~g~~~~-------~~~~l~~~i~~ll~~~~~~ 342 (391)
T PRK13608 273 SSQL--MITKPGGITISEGLARCIPMIFLNPAPGQELENALYFEE-KGFGKIAD-------TPEEAIKIVASLTNGNEQL 342 (391)
T ss_pred hhhE--EEeCCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHh-CCcEEEeC-------CHHHHHHHHHHHhcCHHHH
Confidence 7777 99988888999999999999998 776777899999999 49998763 6899999999999887655
Q ss_pred HHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Q 012314 422 ARALELKEKAMSSVREGGSSYKTFQNFLQWVK 453 (466)
Q Consensus 422 ~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~ 453 (466)
+ +|++..++. ....+....++.+++.+.
T Consensus 343 ~---~m~~~~~~~-~~~~s~~~i~~~l~~l~~ 370 (391)
T PRK13608 343 T---NMISTMEQD-KIKYATQTICRDLLDLIG 370 (391)
T ss_pred H---HHHHHHHHh-cCCCCHHHHHHHHHHHhh
Confidence 4 444444432 123344444444444443
|
|
| >PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=99.62 E-value=4.8e-14 Score=137.16 Aligned_cols=343 Identities=12% Similarity=0.036 Sum_probs=169.4
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCccHHHHHH
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKLIE 83 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (466)
+||++.+.+..||++|.. ++++|.++++++.++..... .+...+. ...+.++.++- ....+.+.
T Consensus 2 ~ki~i~~Ggt~G~i~~a~-l~~~L~~~~~~~~~~~~~~~--~~~~~~~-----~~~~~~~~l~~--------~g~~~~~~ 65 (380)
T PRK00025 2 LRIAIVAGEVSGDLLGAG-LIRALKARAPNLEFVGVGGP--RMQAAGC-----ESLFDMEELAV--------MGLVEVLP 65 (380)
T ss_pred ceEEEEecCcCHHHHHHH-HHHHHHhcCCCcEEEEEccH--HHHhCCC-----ccccCHHHhhh--------ccHHHHHH
Confidence 589999988889999999 99999998888888875432 2332210 01222222221 01111111
Q ss_pred HHHH--hccHHHHHHHHHHhcCCCCCccEEEeCCC-chhH--HHHHHHcCCceEEeccchhHHHHHHhhcccccccCccC
Q 012314 84 KCLQ--VMPGKLEELIEEINSREDEKIDCFIADGN-IGWS--MEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIID 158 (466)
Q Consensus 84 ~~~~--~~~~~~~~ll~~l~~~~~~~~DlvV~D~~-~~~~--~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~ 158 (466)
.+.. .....+++++++ .+||+|+.-.. ..+. ...|...|||++.+......
T Consensus 66 ~~~~~~~~~~~~~~~l~~------~kPdivi~~~~~~~~~~~a~~a~~~~ip~i~~~~~~~~------------------ 121 (380)
T PRK00025 66 RLPRLLKIRRRLKRRLLA------EPPDVFIGIDAPDFNLRLEKKLRKAGIPTIHYVSPSVW------------------ 121 (380)
T ss_pred HHHHHHHHHHHHHHHHHH------cCCCEEEEeCCCCCCHHHHHHHHHCCCCEEEEeCCchh------------------
Confidence 1111 112234455555 89999886322 1222 34467789998864211000
Q ss_pred CCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHHHhhcCCcceecc
Q 012314 159 SHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTFPELLPIGP 238 (466)
Q Consensus 159 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~~~~~p~v~~VGp 238 (466)
.+. +.. ... ....+|.+++.+...-+.- ....-++.++|.
T Consensus 122 ---------------------------~~~--~~~---~~~-------~~~~~d~i~~~~~~~~~~~-~~~g~~~~~~G~ 161 (380)
T PRK00025 122 ---------------------------AWR--QGR---AFK-------IAKATDHVLALFPFEAAFY-DKLGVPVTFVGH 161 (380)
T ss_pred ---------------------------hcC--chH---HHH-------HHHHHhhheeCCccCHHHH-HhcCCCeEEECc
Confidence 000 000 000 1123455555554332221 111123667772
Q ss_pred ccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhC-----CCCEEEEEcCCCCCCC
Q 012314 239 LLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELC-----KRPFLWVVRPDITTDA 313 (466)
Q Consensus 239 l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~-----~~~~i~~~~~~~~~~~ 313 (466)
-..+.... .+....+...+.-.+++++|++..||...........+++++..+ +.+++++.++.
T Consensus 162 p~~~~~~~------~~~~~~~~~~l~~~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~~ii~~~~~----- 230 (380)
T PRK00025 162 PLADAIPL------LPDRAAARARLGLDPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLRFVLPLVNP----- 230 (380)
T ss_pred CHHHhccc------ccChHHHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCCh-----
Confidence 22211100 001111222222223345666666664322223344455554322 33556654422
Q ss_pred CCCCchhHHHHhcC----CceeecccchhhhhcCCCcccceeccCCchhhhhhhcCcceeeccccc--------chhhh-
Q 012314 314 NDRYPEGFQERVAA----RGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFG--------DQFLN- 380 (466)
Q Consensus 314 ~~~~~~~~~~~~~~----n~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~--------DQ~~~- 380 (466)
...+.+.+.... ++.+..- .-..++..+++ +|+.+|.+++ |++++|+|+|++|... .|..|
T Consensus 231 --~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~~aDl--~v~~sG~~~l-Ea~a~G~PvI~~~~~~~~~~~~~~~~~~~~ 304 (380)
T PRK00025 231 --KRREQIEEALAEYAGLEVTLLDG-QKREAMAAADA--ALAASGTVTL-ELALLKVPMVVGYKVSPLTFWIAKRLVKVP 304 (380)
T ss_pred --hhHHHHHHHHhhcCCCCeEEEcc-cHHHHHHhCCE--EEECccHHHH-HHHHhCCCEEEEEccCHHHHHHHHHHHcCC
Confidence 122233322221 2333220 12468877777 9999998777 9999999999995431 12111
Q ss_pred ----HHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHH
Q 012314 381 ----ERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALELKEKAMSSVREGGSSYKTFQNF 448 (466)
Q Consensus 381 ----a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~ 448 (466)
+..+++. +++..+. ....+++.|.+.+.++++|++.+++..+-.+.+++.+ ..+++.+.++.+
T Consensus 305 ~~~l~~~~~~~-~~~~~~~---~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~-~~~a~~~~~~~i 371 (380)
T PRK00025 305 YVSLPNLLAGR-ELVPELL---QEEATPEKLARALLPLLADGARRQALLEGFTELHQQL-RCGADERAAQAV 371 (380)
T ss_pred eeehHHHhcCC-Ccchhhc---CCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHh-CCCHHHHHHHHH
Confidence 2223321 3333333 2567899999999999999987776555544444433 234444333333
|
|
| >PLN02605 monogalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.1e-12 Score=127.32 Aligned_cols=141 Identities=16% Similarity=0.167 Sum_probs=94.5
Q ss_pred CCCeEEEEEeccccccCHHHHHHHHHHHHh---------CCCCEEEEEcCCCCCCCCCCCchhHHHH-hcCCceeecccc
Q 012314 267 QPSSVVYVSFGSFTILDQVQFQELALGLEL---------CKRPFLWVVRPDITTDANDRYPEGFQER-VAARGQMISWAP 336 (466)
Q Consensus 267 ~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~---------~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~n~~~~~~~p 336 (466)
+++++|++.-|+...- .+..+++++.. .+.++++++|.+ ..+.+.+.+. ...++.+.+|++
T Consensus 204 ~~~~~il~~Gg~~g~~---~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~------~~~~~~L~~~~~~~~v~~~G~~~ 274 (382)
T PLN02605 204 EDLPAVLLMGGGEGMG---PLEETARALGDSLYDKNLGKPIGQVVVICGRN------KKLQSKLESRDWKIPVKVRGFVT 274 (382)
T ss_pred CCCcEEEEECCCcccc---cHHHHHHHHHHhhccccccCCCceEEEEECCC------HHHHHHHHhhcccCCeEEEeccc
Confidence 3455777666554322 23333333322 234566777654 1122222221 124677789998
Q ss_pred hh-hhhcCCCcccceeccCCchhhhhhhcCcceeecccccchh-hhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHH
Q 012314 337 QL-RVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQF-LNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQV 414 (466)
Q Consensus 337 ~~-~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~-~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~l 414 (466)
+. +++..+++ +|+.+|.+|++||+++|+|+|+.+....|. .|+..+.+ .|.|..+. ++++|.++|.++
T Consensus 275 ~~~~l~~aaDv--~V~~~g~~ti~EAma~g~PvI~~~~~pgqe~gn~~~i~~-~g~g~~~~-------~~~~la~~i~~l 344 (382)
T PLN02605 275 NMEEWMGACDC--IITKAGPGTIAEALIRGLPIILNGYIPGQEEGNVPYVVD-NGFGAFSE-------SPKEIARIVAEW 344 (382)
T ss_pred cHHHHHHhCCE--EEECCCcchHHHHHHcCCCEEEecCCCccchhhHHHHHh-CCceeecC-------CHHHHHHHHHHH
Confidence 65 59977777 999999999999999999999998766665 68888888 49998652 689999999999
Q ss_pred hcC-HHHHHHHHH
Q 012314 415 LGN-QDFKARALE 426 (466)
Q Consensus 415 l~~-~~~r~~a~~ 426 (466)
+.| ++.+++..+
T Consensus 345 l~~~~~~~~~m~~ 357 (382)
T PLN02605 345 FGDKSDELEAMSE 357 (382)
T ss_pred HcCCHHHHHHHHH
Confidence 987 655544333
|
|
| >TIGR03492 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=99.52 E-value=6.2e-12 Score=121.61 Aligned_cols=329 Identities=13% Similarity=0.061 Sum_probs=178.3
Q ss_pred CCccCHHHHHHHHHHHHh--CCCEEE---EEeCCcchH-HHHHhhhcCCCCCCCeEEEecCC-CCCCCCCCccHHHHHHH
Q 012314 12 PAQGHVIPLLEFSQCLAK--HGFRVT---FVNTDYNHK-RVVESLQGKNYLGEQIHLVSIPD-GMEPWEDRNDLGKLIEK 84 (466)
Q Consensus 12 ~~~GH~~p~l~la~~L~~--rGh~Vt---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 84 (466)
.|+|-=.-.++||++|.+ .|++|. +++.....+ ..... .+ .+..+|. ++. .......+..
T Consensus 5 nghged~~a~ai~~~l~~~~~~~~v~~~p~vG~~~~~e~~~ip~--------~g-~~~~~~sgg~~----~~~~~~~~~~ 71 (396)
T TIGR03492 5 NGHGEDLIAARIAKALLQLSPDLNLEALPLVGEGRAYQNLGIPI--------IG-PTKELPSGGFS----YQSLRGLLRD 71 (396)
T ss_pred CCchHHHHHHHHHHHHHhhCCCCCeEEeCcccCCHHHhhCCCce--------eC-CCCCCCCCCcc----CCCHHHHHHH
Confidence 455555668899999998 699999 988864432 11110 12 3344432 221 1223333333
Q ss_pred HHH-hccH--HHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEEeccchhHHHHHHhhcccccccCccCCCC
Q 012314 85 CLQ-VMPG--KLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSHG 161 (466)
Q Consensus 85 ~~~-~~~~--~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 161 (466)
..+ .... ....++++.. .+||+||+-.-+. +..+|...|+|++++.+.-.-.+ +.+ ..
T Consensus 72 ~~~gl~~~~~~~~~~~~~~~----~~p~~v~~~Gg~v-~~~aA~~~~~p~~~~~~~esn~~---------~~~----~~- 132 (396)
T TIGR03492 72 LRAGLVGLTLGQWRALRKWA----KKGDLIVAVGDIV-PLLFAWLSGKPYAFVGTAKSDYY---------WES----GP- 132 (396)
T ss_pred HHhhHHHHHHHHHHHHHHHh----hcCCEEEEECcHH-HHHHHHHcCCCceEEEeecccee---------ecC----CC-
Confidence 322 1111 1223334421 2899999876444 88899999999998543211100 000 00
Q ss_pred CCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHHHhhcCCcceec-ccc
Q 012314 162 TPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTFPELLPIG-PLL 240 (466)
Q Consensus 162 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~~~~~p~v~~VG-pl~ 240 (466)
.....+....+||.....+ + .... ....++.+++.+..+-+.- ....-++.+|| |+.
T Consensus 133 ~~~~~~~~~~~~G~~~~p~-e--------------~n~l------~~~~a~~v~~~~~~t~~~l-~~~g~k~~~vGnPv~ 190 (396)
T TIGR03492 133 RRSPSDEYHRLEGSLYLPW-E--------------RWLM------RSRRCLAVFVRDRLTARDL-RRQGVRASYLGNPMM 190 (396)
T ss_pred CCccchhhhccCCCccCHH-H--------------HHHh------hchhhCEEeCCCHHHHHHH-HHCCCeEEEeCcCHH
Confidence 0011122222233221100 0 0010 1145666777664433332 12224889999 554
Q ss_pred CCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhC----CCCEEEEEcCCCCCCCCCC
Q 012314 241 ASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELC----KRPFLWVVRPDITTDANDR 316 (466)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~----~~~~i~~~~~~~~~~~~~~ 316 (466)
..-... .. . -+ .++++.|.+--||-...-.+.+..+++++..+ +..+++.+.++.
T Consensus 191 d~l~~~-------~~-~----~l--~~~~~~lllLpGSR~ae~~~~lp~~l~al~~L~~~~~~~~v~~~~~~~------- 249 (396)
T TIGR03492 191 DGLEPP-------ER-K----PL--LTGRFRIALLPGSRPPEAYRNLKLLLRALEALPDSQPFVFLAAIVPSL------- 249 (396)
T ss_pred hcCccc-------cc-c----cc--CCCCCEEEEECCCCHHHHHccHHHHHHHHHHHhhCCCeEEEEEeCCCC-------
Confidence 432211 00 0 11 12345788877776433334455666666544 456777774331
Q ss_pred CchhHHHHhc-------------------CCceeecccch-hhhhcCCCcccceeccCCchhhhhhhcCcceeecccccc
Q 012314 317 YPEGFQERVA-------------------ARGQMISWAPQ-LRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGD 376 (466)
Q Consensus 317 ~~~~~~~~~~-------------------~n~~~~~~~p~-~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~D 376 (466)
..+.+.+... .++.+..+..+ ..++..+++ +|+-+|..| .|+...|+|+|.+|....
T Consensus 250 ~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~ADl--vI~rSGt~T-~E~a~lg~P~Ilip~~~~ 326 (396)
T TIGR03492 250 SLEKLQAILEDLGWQLEGSSEDQTSLFQKGTLEVLLGRGAFAEILHWADL--GIAMAGTAT-EQAVGLGKPVIQLPGKGP 326 (396)
T ss_pred CHHHHHHHHHhcCceecCCccccchhhccCceEEEechHhHHHHHHhCCE--EEECcCHHH-HHHHHhCCCEEEEeCCCC
Confidence 1122222111 12444455444 468977777 999999766 999999999999998777
Q ss_pred hhhhHHHHHHhh----hceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHH
Q 012314 377 QFLNERYICDFW----KVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARAL 425 (466)
Q Consensus 377 Q~~~a~rv~~~~----G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~ 425 (466)
|. |+...++ . |.++.+. ..+.+.|.+++.++++|++.+++..
T Consensus 327 q~-na~~~~~-~~~l~g~~~~l~-----~~~~~~l~~~l~~ll~d~~~~~~~~ 372 (396)
T TIGR03492 327 QF-TYGFAEA-QSRLLGGSVFLA-----SKNPEQAAQVVRQLLADPELLERCR 372 (396)
T ss_pred HH-HHHHHHh-hHhhcCCEEecC-----CCCHHHHHHHHHHHHcCHHHHHHHH
Confidence 76 8876654 2 6666663 3456999999999999987766554
|
This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown. |
| >PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.51 E-value=7.6e-16 Score=131.15 Aligned_cols=141 Identities=13% Similarity=0.173 Sum_probs=97.0
Q ss_pred EEEEEeccccccCH-HHHHHHHHHHHh--CCCCEEEEEcCCCCCCCCCCCchhHHHHhcCCceeecccc-hhhhhcCCCc
Q 012314 271 VVYVSFGSFTILDQ-VQFQELALGLEL--CKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAP-QLRVLNHPSI 346 (466)
Q Consensus 271 ~v~vs~Gs~~~~~~-~~~~~~~~a~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p-~~~ll~~~~~ 346 (466)
+|+|+.||...... +.+..+...+.. ...++++.+|.... ......+. +...++.+.+|++ ..+++..+++
T Consensus 1 tilv~gGs~g~~~l~~~v~~~~~~~~~~~~~~~viv~~G~~~~----~~~~~~~~-~~~~~v~~~~~~~~m~~~m~~aDl 75 (167)
T PF04101_consen 1 TILVTGGSQGARDLNRLVLKILELLAEKHKNIQVIVQTGKNNY----EELKIKVE-NFNPNVKVFGFVDNMAELMAAADL 75 (167)
T ss_dssp -EEEEETTTSHHHHHCCCCCHHHHHHHHHHHCCCCCCCTTCEC----HHHCCCHC-CTTCCCEEECSSSSHHHHHHHHSE
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHhhcCCCcEEEEEECCCcH----HHHHHHHh-ccCCcEEEEechhhHHHHHHHcCE
Confidence 48999998743211 122223333322 25788888876611 11111111 1126788899999 6679977777
Q ss_pred ccceeccCCchhhhhhhcCcceeeccccc----chhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHH
Q 012314 347 ACFLSHCGWNSTMEGVSNGIPFLCWPYFG----DQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKA 422 (466)
Q Consensus 347 ~~~i~hgG~~s~~eal~~GvP~l~~P~~~----DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~ 422 (466)
+|||||.||++|++++|+|+|++|... +|..||..+++ .|+|..+.. ...+.+.|.++|.+++.++..+.
T Consensus 76 --vIs~aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~-~g~~~~~~~---~~~~~~~L~~~i~~l~~~~~~~~ 149 (167)
T PF04101_consen 76 --VISHAGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAK-KGAAIMLDE---SELNPEELAEAIEELLSDPEKLK 149 (167)
T ss_dssp --EEECS-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHH-CCCCCCSEC---CC-SCCCHHHHHHCHCCCHH-SH
T ss_pred --EEeCCCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHH-cCCccccCc---ccCCHHHHHHHHHHHHcCcHHHH
Confidence 999999999999999999999999988 99999999999 599999985 67779999999999998876533
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B. |
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.50 E-value=3.1e-11 Score=116.34 Aligned_cols=344 Identities=10% Similarity=0.036 Sum_probs=178.3
Q ss_pred EEEEEc---CCC-ccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCccHHH
Q 012314 5 RVLVMP---APA-QGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGK 80 (466)
Q Consensus 5 ~il~~~---~~~-~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (466)
||++++ .|. .|+...+..++++|.++||+|++++.......... .....+...+. +......
T Consensus 1 kIl~i~~~~~p~~~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~--------~~~~~~~~~~~--~~~~~~~---- 66 (364)
T cd03814 1 RIAIVTDTFLPQVNGVVRTLQRLVEHLRARGHEVLVIAPGPFRESEGP--------ARVVPVPSVPL--PGYPEIR---- 66 (364)
T ss_pred CeEEEecccCccccceehHHHHHHHHHHHCCCEEEEEeCCchhhccCC--------CCceeeccccc--CcccceE----
Confidence 355554 223 69999999999999999999999998653221100 01111111110 0000000
Q ss_pred HHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCch---hHHHHHHHcCCceEEeccchhHHHHHHhhcccccccCcc
Q 012314 81 LIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIG---WSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGII 157 (466)
Q Consensus 81 ~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~---~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~ 157 (466)
.. -.....+...++. .+||+|++..... .+..+++..++|++............
T Consensus 67 ---~~-~~~~~~~~~~~~~------~~pdii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~------------- 123 (364)
T cd03814 67 ---LA-LPPRRRVRRLLDA------FAPDVVHIATPGPLGLAALRAARRLGIPVVTSYHTDFPEYLR------------- 123 (364)
T ss_pred ---ec-ccchhhHHHHHHh------cCCCEEEEeccchhhHHHHHHHHHcCCCEEEEEecChHHHhh-------------
Confidence 00 0011123333333 7899998764332 45677888999988755432210000
Q ss_pred CCCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHHHhhcCCcceec
Q 012314 158 DSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTFPELLPIG 237 (466)
Q Consensus 158 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~~~~~p~v~~VG 237 (466)
... ............. .....+|.+++.+....+.......+++..+.
T Consensus 124 ----------------------------~~~-~~~~~~~~~~~~~---~~~~~~d~i~~~s~~~~~~~~~~~~~~~~~~~ 171 (364)
T cd03814 124 ----------------------------YYG-LGPLSWLAWAYLR---WFHNRADRVLVPSPSLADELRARGFRRVRLWP 171 (364)
T ss_pred ----------------------------hcc-cchHhHhhHHHHH---HHHHhCCEEEeCCHHHHHHHhccCCCceeecC
Confidence 000 0000000011111 12357888888888766532111223444433
Q ss_pred cccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhC----CCCEEEEEcCCCCCCC
Q 012314 238 PLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELC----KRPFLWVVRPDITTDA 313 (466)
Q Consensus 238 pl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~----~~~~i~~~~~~~~~~~ 313 (466)
+-....... +..........+- ..++.+++..|+... ......+++++..+ +.++++...+.
T Consensus 172 ~g~~~~~~~----~~~~~~~~~~~~~---~~~~~~i~~~G~~~~--~k~~~~~i~~~~~l~~~~~~~l~i~G~~~----- 237 (364)
T cd03814 172 RGVDTELFH----PRRRDEALRARLG---PPDRPVLLYVGRLAP--EKNLEALLDADLPLRRRPPVRLVIVGDGP----- 237 (364)
T ss_pred CCccccccC----cccccHHHHHHhC---CCCCeEEEEEecccc--ccCHHHHHHHHHHhhhcCCceEEEEeCCc-----
Confidence 222111100 0000000011111 123356677776532 22334444444333 34444443322
Q ss_pred CCCCchhHHHHhcCCceeecccchhh---hhcCCCcccceeccC----CchhhhhhhcCcceeecccccchhhhHHHHHH
Q 012314 314 NDRYPEGFQERVAARGQMISWAPQLR---VLNHPSIACFLSHCG----WNSTMEGVSNGIPFLCWPYFGDQFLNERYICD 386 (466)
Q Consensus 314 ~~~~~~~~~~~~~~n~~~~~~~p~~~---ll~~~~~~~~i~hgG----~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~ 386 (466)
..+.+. ...+|+.+.+|+++.+ ++..+++ +|..+. .++++||+++|+|+|+.+.. .+...+++
T Consensus 238 ---~~~~~~-~~~~~v~~~g~~~~~~~~~~~~~~d~--~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~----~~~~~i~~ 307 (364)
T cd03814 238 ---ARARLE-ARYPNVHFLGFLDGEELAAAYASADV--FVFPSRTETFGLVVLEAMASGLPVVAPDAG----GPADIVTD 307 (364)
T ss_pred ---hHHHHh-ccCCcEEEEeccCHHHHHHHHHhCCE--EEECcccccCCcHHHHHHHcCCCEEEcCCC----CchhhhcC
Confidence 111111 2357888889998654 7877776 776543 47899999999999998644 45566666
Q ss_pred hhhceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Q 012314 387 FWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALELKEKAMSSVREGGSSYKTFQNFLQW 451 (466)
Q Consensus 387 ~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~ 451 (466)
. +.|.... .-+.+++.++|.+++.|++.+++..+-+.+..+ .-+.....+++++.
T Consensus 308 ~-~~g~~~~-----~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 362 (364)
T cd03814 308 G-ENGLLVE-----PGDAEAFAAALAALLADPELRRRMAARARAEAE----RRSWEAFLDNLLEA 362 (364)
T ss_pred C-cceEEcC-----CCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHh----hcCHHHHHHHHHHh
Confidence 3 8898884 346788999999999998777655544444332 33445555555443
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Probab=99.49 E-value=1e-10 Score=116.70 Aligned_cols=138 Identities=12% Similarity=0.136 Sum_probs=87.7
Q ss_pred EEEEEeccccccCHHHHHHHHHHHHhCC-CCEEEEEcCCCCCCCCCCCchhHHHHh-cCCceeecccchh---hhhcCCC
Q 012314 271 VVYVSFGSFTILDQVQFQELALGLELCK-RPFLWVVRPDITTDANDRYPEGFQERV-AARGQMISWAPQL---RVLNHPS 345 (466)
Q Consensus 271 ~v~vs~Gs~~~~~~~~~~~~~~a~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~n~~~~~~~p~~---~ll~~~~ 345 (466)
.+++..|+.. ....+..++++++..+ .++++ +|++ ...+.+.+.. ..++.+.+++++. .++..++
T Consensus 264 ~~i~~vGrl~--~~K~~~~li~a~~~~~~~~l~i-vG~G-------~~~~~l~~~~~~~~V~f~G~v~~~ev~~~~~~aD 333 (465)
T PLN02871 264 PLIVYVGRLG--AEKNLDFLKRVMERLPGARLAF-VGDG-------PYREELEKMFAGTPTVFTGMLQGDELSQAYASGD 333 (465)
T ss_pred eEEEEeCCCc--hhhhHHHHHHHHHhCCCcEEEE-EeCC-------hHHHHHHHHhccCCeEEeccCCHHHHHHHHHHCC
Confidence 4556668753 3345666777776654 45444 4433 1223333322 2577788999864 4787777
Q ss_pred cccceeccC----CchhhhhhhcCcceeecccccchhhhHHHHHH---hhhceeEeecCCCCCcCHHHHHHHHHHHhcCH
Q 012314 346 IACFLSHCG----WNSTMEGVSNGIPFLCWPYFGDQFLNERYICD---FWKVGLKFDRDEGGIITREEIKNKVDQVLGNQ 418 (466)
Q Consensus 346 ~~~~i~hgG----~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~---~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~ 418 (466)
+ +|.-.. ..++.||+++|+|+|+.... .....+.+ . +.|..+++ -+.++++++|.++++|+
T Consensus 334 v--~V~pS~~E~~g~~vlEAmA~G~PVI~s~~g----g~~eiv~~~~~~-~~G~lv~~-----~d~~~la~~i~~ll~~~ 401 (465)
T PLN02871 334 V--FVMPSESETLGFVVLEAMASGVPVVAARAG----GIPDIIPPDQEG-KTGFLYTP-----GDVDDCVEKLETLLADP 401 (465)
T ss_pred E--EEECCcccccCcHHHHHHHcCCCEEEcCCC----CcHhhhhcCCCC-CceEEeCC-----CCHHHHHHHHHHHHhCH
Confidence 7 775332 35789999999999987543 33334443 4 77888853 36899999999999988
Q ss_pred HHHHHHHHHHHH
Q 012314 419 DFKARALELKEK 430 (466)
Q Consensus 419 ~~r~~a~~~~~~ 430 (466)
+.+++..+-++.
T Consensus 402 ~~~~~~~~~a~~ 413 (465)
T PLN02871 402 ELRERMGAAARE 413 (465)
T ss_pred HHHHHHHHHHHH
Confidence 766554444433
|
|
| >COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.6e-11 Score=106.76 Aligned_cols=148 Identities=10% Similarity=0.050 Sum_probs=112.9
Q ss_pred CeEEEEEeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchhHHHHh--cCCceeecccc-hhhhhcCCC
Q 012314 269 SSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERV--AARGQMISWAP-QLRVLNHPS 345 (466)
Q Consensus 269 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~--~~n~~~~~~~p-~~~ll~~~~ 345 (466)
+.-|+|++|. +.+....-.++..+.+.++.+-+++++. .+..+++.+.. .+|..+..... ...|+..++
T Consensus 158 ~r~ilI~lGG--sDpk~lt~kvl~~L~~~~~nl~iV~gs~------~p~l~~l~k~~~~~~~i~~~~~~~dma~LMke~d 229 (318)
T COG3980 158 KRDILITLGG--SDPKNLTLKVLAELEQKNVNLHIVVGSS------NPTLKNLRKRAEKYPNINLYIDTNDMAELMKEAD 229 (318)
T ss_pred hheEEEEccC--CChhhhHHHHHHHhhccCeeEEEEecCC------CcchhHHHHHHhhCCCeeeEecchhHHHHHHhcc
Confidence 4479999994 4566677778888887776666666643 33444444433 36777665555 446997777
Q ss_pred cccceeccCCchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHH
Q 012314 346 IACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARAL 425 (466)
Q Consensus 346 ~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~ 425 (466)
+ .|+-||. |+.|++.-|+|.+++|+..-|-..|...+. +|+-..+.. .++++.....+.++.+|...|++.-
T Consensus 230 ~--aI~AaGs-tlyEa~~lgvP~l~l~~a~NQ~~~a~~f~~-lg~~~~l~~----~l~~~~~~~~~~~i~~d~~~rk~l~ 301 (318)
T COG3980 230 L--AISAAGS-TLYEALLLGVPSLVLPLAENQIATAKEFEA-LGIIKQLGY----HLKDLAKDYEILQIQKDYARRKNLS 301 (318)
T ss_pred h--heeccch-HHHHHHHhcCCceEEeeeccHHHHHHHHHh-cCchhhccC----CCchHHHHHHHHHhhhCHHHhhhhh
Confidence 7 9998886 899999999999999999999999999998 699888863 3888888899999999988888776
Q ss_pred HHHHHHH
Q 012314 426 ELKEKAM 432 (466)
Q Consensus 426 ~~~~~~~ 432 (466)
.-++.+-
T Consensus 302 ~~~~~i~ 308 (318)
T COG3980 302 FGSKLIG 308 (318)
T ss_pred hccceee
Confidence 6555443
|
|
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.39 E-value=1e-09 Score=107.29 Aligned_cols=88 Identities=19% Similarity=0.215 Sum_probs=63.4
Q ss_pred CCceeecccchhh---hhcCCCccccee-ccCC-chhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCCCC
Q 012314 327 ARGQMISWAPQLR---VLNHPSIACFLS-HCGW-NSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGI 401 (466)
Q Consensus 327 ~n~~~~~~~p~~~---ll~~~~~~~~i~-hgG~-~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~ 401 (466)
+++.+.+++|+.+ ++..+++-++-+ +.|. .++.||+++|+|+|+. |.......+.+. ..|..+++
T Consensus 281 ~~V~f~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~PVIas----~~~g~~e~i~~~-~~G~lv~~----- 350 (396)
T cd03818 281 SRVHFLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGCLVVGS----DTAPVREVITDG-ENGLLVDF----- 350 (396)
T ss_pred ceEEEeCCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCCCCEEEc----CCCCchhhcccC-CceEEcCC-----
Confidence 5788889999764 676777722223 2232 4789999999999987 445566666652 57887743
Q ss_pred cCHHHHHHHHHHHhcCHHHHHHH
Q 012314 402 ITREEIKNKVDQVLGNQDFKARA 424 (466)
Q Consensus 402 ~~~~~l~~~i~~ll~~~~~r~~a 424 (466)
-++++++++|.++++|++.+++.
T Consensus 351 ~d~~~la~~i~~ll~~~~~~~~l 373 (396)
T cd03818 351 FDPDALAAAVIELLDDPARRARL 373 (396)
T ss_pred CCHHHHHHHHHHHHhCHHHHHHH
Confidence 46999999999999988665543
|
ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). |
| >PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.38 E-value=2.1e-12 Score=106.43 Aligned_cols=125 Identities=15% Similarity=0.182 Sum_probs=81.3
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCccHHHHHHHH
Q 012314 6 VLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKLIEKC 85 (466)
Q Consensus 6 il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (466)
|+|++.|+.||++|+++||++|++|||+|++++++.+.+.+.+. +++|..++... ...............
T Consensus 1 Ili~~~Gt~Ghv~P~lala~~L~~rGh~V~~~~~~~~~~~v~~~---------Gl~~~~~~~~~-~~~~~~~~~~~~~~~ 70 (139)
T PF03033_consen 1 ILIATGGTRGHVYPFLALARALRRRGHEVRLATPPDFRERVEAA---------GLEFVPIPGDS-RLPRSLEPLANLRRL 70 (139)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHTT-EEEEEETGGGHHHHHHT---------T-EEEESSSCG-GGGHHHHHHHHHHCH
T ss_pred CEEEEcCChhHHHHHHHHHHHHhccCCeEEEeecccceeccccc---------CceEEEecCCc-CcCcccchhhhhhhH
Confidence 78999999999999999999999999999999999999999665 79999987550 000000011111111
Q ss_pred HHh--ccHHHHHHHHHHhc------CCCCCccEEEeCCCchhHHHHHHHcCCceEEeccchhH
Q 012314 86 LQV--MPGKLEELIEEINS------REDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAA 140 (466)
Q Consensus 86 ~~~--~~~~~~~ll~~l~~------~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~~~~~~ 140 (466)
.+. ......+.++..+. .+....|+++.+.....+..+|+++|||.+.....+.+
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~vaE~~~iP~~~~~~~p~~ 133 (139)
T PF03033_consen 71 ARLIRGLEEAMRILARFRPDLVVAAGGYVADDVIIAAPLAFAAALVAEQLGIPGVANRLFPWF 133 (139)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCCHCTTTTECCEECHHHHHTHHHHHHHHHTS-EEEEESSGGG
T ss_pred HHHhhhhhHHHHHhhccCcchhhhccCcccchHHHhhhhcCccceeEhhhCchHHHHhhCCcC
Confidence 111 11112222222221 11146788888887778999999999999998765553
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B .... |
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.36 E-value=7.9e-10 Score=106.21 Aligned_cols=138 Identities=13% Similarity=0.109 Sum_probs=85.4
Q ss_pred CeEEEEEeccccccCHHHHHHHHHHHHhC---CCCEEEEEcCCCCCCCCCCCchhHHHHhcCCceeecccchh---hhhc
Q 012314 269 SSVVYVSFGSFTILDQVQFQELALGLELC---KRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQL---RVLN 342 (466)
Q Consensus 269 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~---~ll~ 342 (466)
.+.+++..|+.. +......+++++..+ +.++++...+. ............+++.+.+++++. .++.
T Consensus 190 ~~~~i~~~G~~~--~~k~~~~li~~~~~l~~~~~~l~i~G~~~------~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~ 261 (359)
T cd03823 190 GRLRFGFIGQLT--PHKGVDLLLEAFKRLPRGDIELVIVGNGL------ELEEESYELEGDPRVEFLGAYPQEEIDDFYA 261 (359)
T ss_pred CceEEEEEecCc--cccCHHHHHHHHHHHHhcCcEEEEEcCch------hhhHHHHhhcCCCeEEEeCCCCHHHHHHHHH
Confidence 346677778753 223344455555433 45554443322 000010000124788888999755 4687
Q ss_pred CCCccccee----ccC-CchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcC
Q 012314 343 HPSIACFLS----HCG-WNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGN 417 (466)
Q Consensus 343 ~~~~~~~i~----hgG-~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~ 417 (466)
.+++ +|. ..| ..++.||+++|+|+|+.+ .......+.+. +.|..+.. -+.+++.+++.++++|
T Consensus 262 ~ad~--~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~----~~~~~e~i~~~-~~g~~~~~-----~d~~~l~~~i~~l~~~ 329 (359)
T cd03823 262 EIDV--LVVPSIWPENFPLVIREALAAGVPVIASD----IGGMAELVRDG-VNGLLFPP-----GDAEDLAAALERLIDD 329 (359)
T ss_pred hCCE--EEEcCcccCCCChHHHHHHHCCCCEEECC----CCCHHHHhcCC-CcEEEECC-----CCHHHHHHHHHHHHhC
Confidence 7777 663 233 357899999999999874 44566667663 57888853 3589999999999998
Q ss_pred HHHHHHHHH
Q 012314 418 QDFKARALE 426 (466)
Q Consensus 418 ~~~r~~a~~ 426 (466)
+..++++.+
T Consensus 330 ~~~~~~~~~ 338 (359)
T cd03823 330 PDLLERLRA 338 (359)
T ss_pred hHHHHHHHH
Confidence 876555443
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). |
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.36 E-value=8.6e-10 Score=108.23 Aligned_cols=332 Identities=17% Similarity=0.146 Sum_probs=168.7
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCccHHHH
Q 012314 2 SRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKL 81 (466)
Q Consensus 2 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (466)
+++||++++....|+-..+..+|++|+++||+|++++........ .. ....++.++.++..-.. .......
T Consensus 2 ~~~~~~~~~~~~~~~~~R~~~~a~~L~~~G~~V~ii~~~~~~~~~-~~-----~~~~~v~~~~~~~~~~~---~~~~~~~ 72 (415)
T cd03816 2 KRKRVCVLVLGDIGRSPRMQYHALSLAKHGWKVDLVGYLETPPHD-EI-----LSNPNITIHPLPPPPQR---LNKLPFL 72 (415)
T ss_pred CccEEEEEEecccCCCHHHHHHHHHHHhcCceEEEEEecCCCCCH-HH-----hcCCCEEEEECCCCccc---cccchHH
Confidence 567888888888888899999999999999999999975322111 10 01246777776532100 1111122
Q ss_pred HHH---HHHhccHHHHHHHHHHhcCCCCCccEEEeCC-Cch----hHHHHHHHcCCceEEeccchhHHHHHHhhcccccc
Q 012314 82 IEK---CLQVMPGKLEELIEEINSREDEKIDCFIADG-NIG----WSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLID 153 (466)
Q Consensus 82 ~~~---~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~-~~~----~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~ 153 (466)
+.. ....+...++.+++. .+||+|++.. ... .+..++...++|+|..+.........
T Consensus 73 ~~~~~~~~~~~~~~~~~l~~~------~~~Dvi~~~~~~~~~~~~~a~~~~~~~~~~~V~~~h~~~~~~~~--------- 137 (415)
T cd03816 73 LFAPLKVLWQFFSLLWLLYKL------RPADYILIQNPPSIPTLLIAWLYCLLRRTKLIIDWHNYGYTILA--------- 137 (415)
T ss_pred HHHHHHHHHHHHHHHHHHHhc------CCCCEEEEeCCCCchHHHHHHHHHHHhCCeEEEEcCCchHHHHh---------
Confidence 221 111222223333333 6799999853 211 24445666799998865532210000
Q ss_pred cCccCCCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHHH-hhc-C
Q 012314 154 DGIIDSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAF-TTF-P 231 (466)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~~-~~~-p 231 (466)
+ . .........+..++.+. ....+|.+++.|...-+.-.. ... .
T Consensus 138 -----------------------------~--~-~~~~~~~~~~~~~~e~~--~~~~ad~ii~vS~~~~~~l~~~~~~~~ 183 (415)
T cd03816 138 -----------------------------L--K-LGENHPLVRLAKWYEKL--FGRLADYNLCVTKAMKEDLQQFNNWKI 183 (415)
T ss_pred -----------------------------c--c-cCCCCHHHHHHHHHHHH--HhhcCCEeeecCHHHHHHHHhhhccCC
Confidence 0 0 00000000111111110 124578888888764332211 111 2
Q ss_pred Cccee--ccccCCCCCCCCCCCcccCCccchhhh----------------ccCCCCeEEEEEeccccccCHHHHHHHHHH
Q 012314 232 ELLPI--GPLLASNRLGNTAGYFWCEDSNCLKWL----------------DQQQPSSVVYVSFGSFTILDQVQFQELALG 293 (466)
Q Consensus 232 ~v~~V--Gpl~~~~~~~~~~~~~~~~~~~l~~~~----------------~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a 293 (466)
++..| |+...-.+. +....-..+. ...+++..++++.|... +...+..+++|
T Consensus 184 ki~vI~Ng~~~~f~p~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~grl~--~~K~~~~li~A 253 (415)
T cd03816 184 RATVLYDRPPEQFRPL--------PLEEKHELFLKLAKTFLTRELRIGAVQLSEERPALLVSSTSWT--PDEDFGILLDA 253 (415)
T ss_pred CeeecCCCCHHHceeC--------cHHHHHHHHHhccccccccccccccceecCCCceEEEEecccc--CCCCHHHHHHH
Confidence 22222 211000000 0000000010 01123446666677643 23344455555
Q ss_pred HHhCC---------CCE-EEEEcCCCCCCCCCCCchhHHHHh---c-CCceee-cccchh---hhhcCCCccccee-c--
Q 012314 294 LELCK---------RPF-LWVVRPDITTDANDRYPEGFQERV---A-ARGQMI-SWAPQL---RVLNHPSIACFLS-H-- 352 (466)
Q Consensus 294 ~~~~~---------~~~-i~~~~~~~~~~~~~~~~~~~~~~~---~-~n~~~~-~~~p~~---~ll~~~~~~~~i~-h-- 352 (466)
+..+. .++ ++.+|.+ ...+.+.+.. . +|+.+. +|+|.. .+|+.+++ +|. +
T Consensus 254 ~~~l~~~~~~~~~~~~i~l~ivG~G-------~~~~~l~~~~~~~~l~~~~~~~g~~~~~~~~~~l~~aDv--~v~~~~~ 324 (415)
T cd03816 254 LVAYEKSAATGPKLPKLLCIITGKG-------PLKEKYLERIKELKLKKVTIRTPWLSAEDYPKLLASADL--GVSLHTS 324 (415)
T ss_pred HHHHHHhhcccccCCCEEEEEEecC-------ccHHHHHHHHHHcCCCcEEEEcCcCCHHHHHHHHHhCCE--EEEcccc
Confidence 53321 123 2333433 1223333322 2 456655 688754 46877777 653 1
Q ss_pred ----cCCchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcC---HHHHH
Q 012314 353 ----CGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGN---QDFKA 422 (466)
Q Consensus 353 ----gG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~---~~~r~ 422 (466)
|-.+++.||+++|+|+|+. |.......+++. +.|..+ + +.++|+++|.++++| ++-++
T Consensus 325 ~~~~~~p~~~~Eama~G~PVI~s----~~~~~~eiv~~~-~~G~lv-----~--d~~~la~~i~~ll~~~~~~~~~~ 389 (415)
T cd03816 325 SSGLDLPMKVVDMFGCGLPVCAL----DFKCIDELVKHG-ENGLVF-----G--DSEELAEQLIDLLSNFPNRGKLN 389 (415)
T ss_pred ccccCCcHHHHHHHHcCCCEEEe----CCCCHHHHhcCC-CCEEEE-----C--CHHHHHHHHHHHHhcCCCHHHHH
Confidence 1234789999999999987 344566677763 788887 2 689999999999988 55444
|
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. |
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.35 E-value=3.9e-10 Score=109.51 Aligned_cols=344 Identities=15% Similarity=0.041 Sum_probs=171.1
Q ss_pred EEEEEcCC----CccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCccHHH
Q 012314 5 RVLVMPAP----AQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGK 80 (466)
Q Consensus 5 ~il~~~~~----~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (466)
||++++.. ..|+......+++.|+++||+|++++....................++.+..++...... ......
T Consensus 1 kIl~i~~~~~~~~~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 78 (394)
T cd03794 1 KILILSQYFPPELGGGAFRTTELAEELVKRGHEVTVITGSPNYPSGKIYKGYKREEVDGVRVHRVPLPPYKK--NGLLKR 78 (394)
T ss_pred CEEEEecccCCccCCcceeHHHHHHHHHhCCceEEEEecCCCcccccccccceEEecCCeEEEEEecCCCCc--cchHHH
Confidence 46666643 258999999999999999999999998643332211000000112356665554322111 111111
Q ss_pred HHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCch----hHHHHHHHcCCceEEeccchhHHHHHHhhcccccccCc
Q 012314 81 LIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIG----WSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGI 156 (466)
Q Consensus 81 ~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~----~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~ 156 (466)
....+ .........+.. +. .+||+|++..... .+..++...++|++.............
T Consensus 79 ~~~~~-~~~~~~~~~~~~--~~---~~~D~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~----------- 141 (394)
T cd03794 79 LLNYL-SFALSALLALLK--RR---RRPDVIIATSPPLLIALAALLLARLKGAPFVLEVRDLWPESAVA----------- 141 (394)
T ss_pred HHhhh-HHHHHHHHHHHh--cc---cCCCEEEEcCChHHHHHHHHHHHHhcCCCEEEEehhhcchhHHH-----------
Confidence 11111 111111112211 12 7899999996211 344556667999988654321100000
Q ss_pred cCCCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHh-hhccccEEEEcChhhccHHH-Hhh-cCCc
Q 012314 157 IDSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTR-AMIAVNFHFCNSTYELESEA-FTT-FPEL 233 (466)
Q Consensus 157 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~vl~~s~~~le~~~-~~~-~p~v 233 (466)
....... .....+...... ....+|.+++.+....+.-. ... ..++
T Consensus 142 -----------------------------~~~~~~~--~~~~~~~~~~~~~~~~~~d~vi~~s~~~~~~~~~~~~~~~~~ 190 (394)
T cd03794 142 -----------------------------LGLLKNG--SLLYRLLRKLERLIYRRADAIVVISPGMREYLVRRGVPPEKI 190 (394)
T ss_pred -----------------------------ccCcccc--chHHHHHHHHHHHHHhcCCEEEEECHHHHHHHHhcCCCcCce
Confidence 0000000 000111111111 23678888888876655431 011 1244
Q ss_pred ceeccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHh---C-CCCEEEEEcCCC
Q 012314 234 LPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLEL---C-KRPFLWVVRPDI 309 (466)
Q Consensus 234 ~~VGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~---~-~~~~i~~~~~~~ 309 (466)
..+........... ........... ..+++.+++..|+... ......+++++.. . +.++++ ++..
T Consensus 191 ~~i~~~~~~~~~~~-----~~~~~~~~~~~--~~~~~~~i~~~G~~~~--~k~~~~l~~~~~~l~~~~~~~l~i-~G~~- 259 (394)
T cd03794 191 SVIPNGVDLELFKP-----PPADESLRKEL--GLDDKFVVLYAGNIGR--AQGLDTLLEAAALLKDRPDIRFLI-VGDG- 259 (394)
T ss_pred EEcCCCCCHHHcCC-----ccchhhhhhcc--CCCCcEEEEEecCccc--ccCHHHHHHHHHHHhhcCCeEEEE-eCCc-
Confidence 44432222111100 00000000111 1224467777787532 2223334444432 2 344443 3433
Q ss_pred CCCCCCCCchhHHH----HhcCCceeecccchh---hhhcCCCcccceeccC---------CchhhhhhhcCcceeeccc
Q 012314 310 TTDANDRYPEGFQE----RVAARGQMISWAPQL---RVLNHPSIACFLSHCG---------WNSTMEGVSNGIPFLCWPY 373 (466)
Q Consensus 310 ~~~~~~~~~~~~~~----~~~~n~~~~~~~p~~---~ll~~~~~~~~i~hgG---------~~s~~eal~~GvP~l~~P~ 373 (466)
...+.+.+ ...+|+.+.+++|+. .++..+++ +|.... .+++.||+++|+|+|+.+.
T Consensus 260 ------~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di--~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~ 331 (394)
T cd03794 260 ------PEKEELKELAKALGLDNVTFLGRVPKEELPELLAAADV--GLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVD 331 (394)
T ss_pred ------ccHHHHHHHHHHcCCCcEEEeCCCChHHHHHHHHhhCe--eEEeccCcccccccCchHHHHHHHCCCcEEEecC
Confidence 11122222 234788888999865 46767776 664322 2347999999999999976
Q ss_pred ccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHH
Q 012314 374 FGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALEL 427 (466)
Q Consensus 374 ~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~~ 427 (466)
.+.+. .+.+ .+.|..++. -+.++++++|.+++.|++.+++..+-
T Consensus 332 ~~~~~----~~~~-~~~g~~~~~-----~~~~~l~~~i~~~~~~~~~~~~~~~~ 375 (394)
T cd03794 332 GESAE----LVEE-AGAGLVVPP-----GDPEALAAAILELLDDPEERAEMGEN 375 (394)
T ss_pred CCchh----hhcc-CCcceEeCC-----CCHHHHHHHHHHHHhChHHHHHHHHH
Confidence 55433 3444 267887743 37899999999999888766554433
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. |
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.5e-09 Score=105.20 Aligned_cols=112 Identities=11% Similarity=0.064 Sum_probs=73.8
Q ss_pred CCceeecccch-hhhhcCCCccccee----ccCCchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCCCC
Q 012314 327 ARGQMISWAPQ-LRVLNHPSIACFLS----HCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGI 401 (466)
Q Consensus 327 ~n~~~~~~~p~-~~ll~~~~~~~~i~----hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~ 401 (466)
+++.+.++.+. ..++..+++ +|. -|...++.||+++|+|+|+. |....+..+.+. ..|..+++
T Consensus 253 ~~v~~~g~~~~~~~~~~~~d~--~v~ps~~E~~~~~~~EAma~g~PvI~s----~~~~~~e~i~~~-~~G~~~~~----- 320 (371)
T cd04962 253 DDVLFLGKQDHVEELLSIADL--FLLPSEKESFGLAALEAMACGVPVVAS----NAGGIPEVVKHG-ETGFLVDV----- 320 (371)
T ss_pred ceEEEecCcccHHHHHHhcCE--EEeCCCcCCCccHHHHHHHcCCCEEEe----CCCCchhhhcCC-CceEEcCC-----
Confidence 56777787765 358877776 662 23456999999999999997 444566667663 67877743
Q ss_pred cCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Q 012314 402 ITREEIKNKVDQVLGNQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVK 453 (466)
Q Consensus 402 ~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~ 453 (466)
-+.+++++++.++++|++.+++..+-+... +.+.-+....++++.+.+.
T Consensus 321 ~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~---~~~~fs~~~~~~~~~~~y~ 369 (371)
T cd04962 321 GDVEAMAEYALSLLEDDELWQEFSRAARNR---AAERFDSERIVPQYEALYR 369 (371)
T ss_pred CCHHHHHHHHHHHHhCHHHHHHHHHHHHHH---HHHhCCHHHHHHHHHHHHH
Confidence 478999999999998876655443333322 1124455555555555443
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Probab=99.33 E-value=3.1e-09 Score=102.09 Aligned_cols=314 Identities=15% Similarity=0.093 Sum_probs=168.8
Q ss_pred ccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCccHHHHHHHHHHhccHHH
Q 012314 14 QGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKLIEKCLQVMPGKL 93 (466)
Q Consensus 14 ~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (466)
.|+...+..+++.|.+.||+|++++............ ........ .. ..... ...........+
T Consensus 14 ~G~~~~~~~l~~~L~~~g~~v~i~~~~~~~~~~~~~~-------~~~~~~~~-----~~-~~~~~---~~~~~~~~~~~~ 77 (374)
T cd03801 14 GGAERHVLELARALAARGHEVTVLTPGDGGLPDEEEV-------GGIVVVRP-----PP-LLRVR---RLLLLLLLALRL 77 (374)
T ss_pred CcHhHHHHHHHHHHHhcCceEEEEecCCCCCCceeee-------cCcceecC-----Cc-ccccc---hhHHHHHHHHHH
Confidence 6889999999999999999999999975543221110 00000000 00 00000 000111112233
Q ss_pred HHHHHHHhcCCCCCccEEEeCCCchhHH--HHHHHcCCceEEeccchhHHHHHHhhcccccccCccCCCCCCCccccccc
Q 012314 94 EELIEEINSREDEKIDCFIADGNIGWSM--EIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSHGTPMSMQMFRI 171 (466)
Q Consensus 94 ~~ll~~l~~~~~~~~DlvV~D~~~~~~~--~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 171 (466)
..+++. .++|+|+......... ..+...++|++...........
T Consensus 78 ~~~~~~------~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~---------------------------- 123 (374)
T cd03801 78 RRLLRR------ERFDVVHAHDWLALLAAALAARLLGIPLVLTVHGLEFGRP---------------------------- 123 (374)
T ss_pred HHHhhh------cCCcEEEEechhHHHHHHHHHHhcCCcEEEEeccchhhcc----------------------------
Confidence 444444 7899999997655333 4778889999886543321000
Q ss_pred cCCCCCCCcccccccccCCCCchhHHHHHHHHH-HhhhccccEEEEcChhhccHHHHhhcC---CcceeccccCCCCCCC
Q 012314 172 APKMPEMNSRDCFWAHIGDWTSQKIFFDLLERN-TRAMIAVNFHFCNSTYELESEAFTTFP---ELLPIGPLLASNRLGN 247 (466)
Q Consensus 172 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~vl~~s~~~le~~~~~~~p---~v~~VGpl~~~~~~~~ 247 (466)
. .. ........... ......++.+++.+....+.-...... ++..+..-.......
T Consensus 124 ------------~-~~------~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~- 183 (374)
T cd03801 124 ------------G-NE------LGLLLKLARALERRALRRADRIIAVSEATREELRELGGVPPEKITVIPNGVDTERFR- 183 (374)
T ss_pred ------------c-cc------hhHHHHHHHHHHHHHHHhCCEEEEecHHHHHHHHhcCCCCCCcEEEecCcccccccC-
Confidence 0 00 00111111111 123467889999887766654222222 455554322221110
Q ss_pred CCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhCC-----CCEEEEEcCCCCCCCCCCCchhHH
Q 012314 248 TAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCK-----RPFLWVVRPDITTDANDRYPEGFQ 322 (466)
Q Consensus 248 ~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~-----~~~i~~~~~~~~~~~~~~~~~~~~ 322 (466)
+.......-. ....+..+++.+|+.. .......+++++.... .++++ ++.. .....+.
T Consensus 184 ------~~~~~~~~~~-~~~~~~~~i~~~g~~~--~~k~~~~~i~~~~~~~~~~~~~~l~i-~G~~-------~~~~~~~ 246 (374)
T cd03801 184 ------PAPRAARRRL-GIPEDEPVILFVGRLV--PRKGVDLLLEALAKLRKEYPDVRLVI-VGDG-------PLREELE 246 (374)
T ss_pred ------ccchHHHhhc-CCcCCCeEEEEecchh--hhcCHHHHHHHHHHHhhhcCCeEEEE-EeCc-------HHHHHHH
Confidence 0000000011 1122346667777653 2333445555553322 33333 3322 1112222
Q ss_pred H-----HhcCCceeecccchh---hhhcCCCccccee----ccCCchhhhhhhcCcceeecccccchhhhHHHHHHhhhc
Q 012314 323 E-----RVAARGQMISWAPQL---RVLNHPSIACFLS----HCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKV 390 (466)
Q Consensus 323 ~-----~~~~n~~~~~~~p~~---~ll~~~~~~~~i~----hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~ 390 (466)
+ ...+++.+.+++++. .++..+++ +|. -|..+++.||+++|+|+|+.+. ......+.+. +.
T Consensus 247 ~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di--~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~----~~~~~~~~~~-~~ 319 (374)
T cd03801 247 ALAAELGLGDRVTFLGFVPDEDLPALYAAADV--FVLPSLYEGFGLVLLEAMAAGLPVVASDV----GGIPEVVEDG-ET 319 (374)
T ss_pred HHHHHhCCCcceEEEeccChhhHHHHHHhcCE--EEecchhccccchHHHHHHcCCcEEEeCC----CChhHHhcCC-cc
Confidence 1 135788888999754 47877776 663 3456789999999999998754 5566677653 78
Q ss_pred eeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHH
Q 012314 391 GLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALE 426 (466)
Q Consensus 391 G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~ 426 (466)
|..++. .+.+++.++|.+++.|++.+++..+
T Consensus 320 g~~~~~-----~~~~~l~~~i~~~~~~~~~~~~~~~ 350 (374)
T cd03801 320 GLLVPP-----GDPEALAEAILRLLDDPELRRRLGE 350 (374)
T ss_pred eEEeCC-----CCHHHHHHHHHHHHcChHHHHHHHH
Confidence 888853 4589999999999998876654443
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. |
| >PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.32 E-value=2.8e-09 Score=105.20 Aligned_cols=84 Identities=13% Similarity=0.109 Sum_probs=61.9
Q ss_pred hhhcCCCccccee-----ccCCchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHH
Q 012314 339 RVLNHPSIACFLS-----HCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQ 413 (466)
Q Consensus 339 ~ll~~~~~~~~i~-----hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ 413 (466)
.++..+++ ++. -+|..++.||+++|+|+|+.|...++......+.+. |.++... +.++|+++|.+
T Consensus 315 ~~y~~aDi--~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~~-g~~~~~~-------d~~~La~~l~~ 384 (425)
T PRK05749 315 LLYAIADI--AFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERLLQA-GAAIQVE-------DAEDLAKAVTY 384 (425)
T ss_pred HHHHhCCE--EEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHHHHC-CCeEEEC-------CHHHHHHHHHH
Confidence 57766775 332 134446899999999999999988888888777663 7666542 58999999999
Q ss_pred HhcCHHHHHHHHHHHHHHH
Q 012314 414 VLGNQDFKARALELKEKAM 432 (466)
Q Consensus 414 ll~~~~~r~~a~~~~~~~~ 432 (466)
+++|++.+++..+-+.+..
T Consensus 385 ll~~~~~~~~m~~~a~~~~ 403 (425)
T PRK05749 385 LLTDPDARQAYGEAGVAFL 403 (425)
T ss_pred HhcCHHHHHHHHHHHHHHH
Confidence 9999877765554444433
|
|
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.31 E-value=6.3e-09 Score=99.65 Aligned_cols=321 Identities=12% Similarity=0.071 Sum_probs=167.6
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCccHHHHHHH
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKLIEK 84 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (466)
||++++....|+...+..++++|.++||+|++++......... ...+++.+.++...... ........
T Consensus 1 kIl~i~~~~~g~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~----~~~~~~~~ 68 (359)
T cd03808 1 KILHIVTVDGGLYSFRLPLIKALRAAGYEVHVVAPPGDELEEL--------EALGVKVIPIPLDRRGI----NPFKDLKA 68 (359)
T ss_pred CeeEEEecchhHHHHHHHHHHHHHhcCCeeEEEecCCCccccc--------ccCCceEEecccccccc----ChHhHHHH
Confidence 5788887778999999999999999999999999876544211 11356666665322111 11111111
Q ss_pred HHHhccHHHHHHHHHHhcCCCCCccEEEeCCCch--hHHHHHHHcCCceEEeccchhHHHHHHhhcccccccCccCCCCC
Q 012314 85 CLQVMPGKLEELIEEINSREDEKIDCFIADGNIG--WSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSHGT 162 (466)
Q Consensus 85 ~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 162 (466)
...+.++++. .+||+|++..... .+..++...+.|.+++.......
T Consensus 69 -----~~~~~~~~~~------~~~dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--------------------- 116 (359)
T cd03808 69 -----LLRLYRLLRK------ERPDIVHTHTPKPGILGRLAARLAGVPKVIYTVHGLGF--------------------- 116 (359)
T ss_pred -----HHHHHHHHHh------cCCCEEEEccccchhHHHHHHHHcCCCCEEEEecCcch---------------------
Confidence 1123344444 7899999886443 23344443666655543211100
Q ss_pred CCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHHHhhc---CCcceeccc
Q 012314 163 PMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTF---PELLPIGPL 239 (466)
Q Consensus 163 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~~~~~---p~v~~VGpl 239 (466)
....... .........+ .....+|.+++.+....+.-..... .....+.|.
T Consensus 117 -----------------------~~~~~~~-~~~~~~~~~~--~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~~~~~~~ 170 (359)
T cd03808 117 -----------------------VFTSGGL-KRRLYLLLER--LALRFTDKVIFQNEDDRDLALKLGIIKKKKTVLIPGS 170 (359)
T ss_pred -----------------------hhccchh-HHHHHHHHHH--HHHhhccEEEEcCHHHHHHHHHhcCCCcCceEEecCC
Confidence 0000000 0011111111 1225668888888766554312111 122222222
Q ss_pred cCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhC-----CCCEEEEEcCCCCCCCC
Q 012314 240 LASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELC-----KRPFLWVVRPDITTDAN 314 (466)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~-----~~~~i~~~~~~~~~~~~ 314 (466)
..+.... .+... . ..+++.+++..|+... ......+++++..+ +.++++...+.. .
T Consensus 171 ~~~~~~~------~~~~~---~----~~~~~~~i~~~G~~~~--~k~~~~li~~~~~l~~~~~~~~l~i~G~~~~----~ 231 (359)
T cd03808 171 GVDLDRF------SPSPE---P----IPEDDPVFLFVARLLK--DKGIDELLEAARILKAKGPNVRLLLVGDGDE----E 231 (359)
T ss_pred CCChhhc------Ccccc---c----cCCCCcEEEEEecccc--ccCHHHHHHHHHHHHhcCCCeEEEEEcCCCc----c
Confidence 2211110 00000 0 1224477888887532 22334444444332 234443333221 0
Q ss_pred CCCchhHHHH--hcCCceeecccch-hhhhcCCCcccceecc----CCchhhhhhhcCcceeecccccchhhhHHHHHHh
Q 012314 315 DRYPEGFQER--VAARGQMISWAPQ-LRVLNHPSIACFLSHC----GWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDF 387 (466)
Q Consensus 315 ~~~~~~~~~~--~~~n~~~~~~~p~-~~ll~~~~~~~~i~hg----G~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~ 387 (466)
.........+ ..+++.+.++..+ ..++..+++ +|.-. ..+++.||+++|+|+|+.+.. .....+.+.
T Consensus 232 ~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~adi--~i~ps~~e~~~~~~~Ea~~~G~Pvi~s~~~----~~~~~i~~~ 305 (359)
T cd03808 232 NPAAILEIEKLGLEGRVEFLGFRDDVPELLAAADV--FVLPSYREGLPRVLLEAMAMGRPVIATDVP----GCREAVIDG 305 (359)
T ss_pred hhhHHHHHHhcCCcceEEEeeccccHHHHHHhccE--EEecCcccCcchHHHHHHHcCCCEEEecCC----CchhhhhcC
Confidence 1010000111 2356777777554 358877777 66533 257899999999999987543 345556653
Q ss_pred hhceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHH
Q 012314 388 WKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALE 426 (466)
Q Consensus 388 ~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~ 426 (466)
+.|..++ .-+.+++.++|.+++.|++.+++..+
T Consensus 306 -~~g~~~~-----~~~~~~~~~~i~~l~~~~~~~~~~~~ 338 (359)
T cd03808 306 -VNGFLVP-----PGDAEALADAIERLIEDPELRARMGQ 338 (359)
T ss_pred -cceEEEC-----CCCHHHHHHHHHHHHhCHHHHHHHHH
Confidence 7788874 34789999999999988866554433
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. |
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.31 E-value=2.2e-09 Score=105.09 Aligned_cols=333 Identities=14% Similarity=0.107 Sum_probs=167.8
Q ss_pred ccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCccHHHHHHHHHHhccHHH
Q 012314 14 QGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKLIEKCLQVMPGKL 93 (466)
Q Consensus 14 ~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (466)
.|.-..+..++++|+++||+|++++.......... .....++.++.++................ ....
T Consensus 21 GG~~~~~~~l~~~L~~~g~~V~v~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~ 88 (398)
T cd03800 21 GGQNVYVLELARALARLGHEVDIFTRRIDDALPPI-----VELAPGVRVVRVPAGPAEYLPKEELWPYL-------DEFA 88 (398)
T ss_pred CceeehHHHHHHHHhccCceEEEEEecCCcccCCc-----cccccceEEEecccccccCCChhhcchhH-------HHHH
Confidence 47888999999999999999999997543221110 01124666666553111110000011111 1122
Q ss_pred HHHHHHHhcCCCCCccEEEeCCCch--hHHHHHHHcCCceEEeccchhHHHHHHhhcccccccCccCCCCCCCccccccc
Q 012314 94 EELIEEINSREDEKIDCFIADGNIG--WSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSHGTPMSMQMFRI 171 (466)
Q Consensus 94 ~~ll~~l~~~~~~~~DlvV~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 171 (466)
..+++.++... .+||+|++..... .+..+++.+++|++...+.... .. .
T Consensus 89 ~~~~~~~~~~~-~~~Div~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~---------------------~~--~----- 139 (398)
T cd03800 89 DDLLRFLRREG-GRPDLIHAHYWDSGLVALLLARRLGIPLVHTFHSLGA---------------------VK--R----- 139 (398)
T ss_pred HHHHHHHHhcC-CCccEEEEecCccchHHHHHHhhcCCceEEEeecccc---------------------cC--C-----
Confidence 33333333311 2899999875332 4666788899998875431110 00 0
Q ss_pred cCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHHHhhc---CCcceeccccCCCCCCCC
Q 012314 172 APKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTF---PELLPIGPLLASNRLGNT 248 (466)
Q Consensus 172 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~~~~~---p~v~~VGpl~~~~~~~~~ 248 (466)
. ... . .... . ..............+|.+++.|....+.-..... .++..|.+-.......
T Consensus 140 -~--------~~~-~---~~~~-~-~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~~~vi~ng~~~~~~~-- 202 (398)
T cd03800 140 -R--------HLG-A---ADTY-E-PARRIEAEERLLRAADRVIASTPQEAEELYSLYGAYPRRIRVVPPGVDLERFT-- 202 (398)
T ss_pred -c--------ccc-c---cccc-c-hhhhhhHHHHHHhhCCEEEEcCHHHHHHHHHHccccccccEEECCCCCcccee--
Confidence 0 000 0 0000 0 0000000111346788999888765433212111 1244443222211100
Q ss_pred CCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhC-----CCCEEEEEcCCCCCCCCCCCch---h
Q 012314 249 AGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELC-----KRPFLWVVRPDITTDANDRYPE---G 320 (466)
Q Consensus 249 ~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~-----~~~~i~~~~~~~~~~~~~~~~~---~ 320 (466)
...............+ ...+++..|+... ......+++++..+ +.+++++.++..... ..... .
T Consensus 203 ---~~~~~~~~~~~~~~~~-~~~~i~~~gr~~~--~k~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~--~~~~~~~~~ 274 (398)
T cd03800 203 ---PYGRAEARRARLLRDP-DKPRILAVGRLDP--RKGIDTLIRAYAELPELRERANLVIVGGPRDDIL--AMDEEELRE 274 (398)
T ss_pred ---cccchhhHHHhhccCC-CCcEEEEEccccc--ccCHHHHHHHHHHHHHhCCCeEEEEEECCCCcch--hhhhHHHHH
Confidence 0000000011111122 3366677787532 22334444554332 345555554331100 00001 1
Q ss_pred HHHHh--cCCceeecccchhh---hhcCCCcccceec----cCCchhhhhhhcCcceeecccccchhhhHHHHHHhhhce
Q 012314 321 FQERV--AARGQMISWAPQLR---VLNHPSIACFLSH----CGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVG 391 (466)
Q Consensus 321 ~~~~~--~~n~~~~~~~p~~~---ll~~~~~~~~i~h----gG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G 391 (466)
+.+.. .+|+.+.+|+|+.+ ++..+++ ++.. |-..++.||+++|+|+|+... ......+++. +.|
T Consensus 275 ~~~~~~~~~~v~~~g~~~~~~~~~~~~~adi--~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~----~~~~e~i~~~-~~g 347 (398)
T cd03800 275 LARELGVIDRVDFPGRVSREDLPALYRAADV--FVNPALYEPFGLTALEAMACGLPVVATAV----GGPRDIVVDG-VTG 347 (398)
T ss_pred HHHhcCCCceEEEeccCCHHHHHHHHHhCCE--EEecccccccCcHHHHHHhcCCCEEECCC----CCHHHHccCC-CCe
Confidence 11111 36788889999764 5777776 7643 224689999999999998753 3455667663 789
Q ss_pred eEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHH
Q 012314 392 LKFDRDEGGIITREEIKNKVDQVLGNQDFKARA 424 (466)
Q Consensus 392 ~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a 424 (466)
..++. -+.++++++|.++++|++.+++.
T Consensus 348 ~~~~~-----~~~~~l~~~i~~l~~~~~~~~~~ 375 (398)
T cd03800 348 LLVDP-----RDPEALAAALRRLLTDPALRRRL 375 (398)
T ss_pred EEeCC-----CCHHHHHHHHHHHHhCHHHHHHH
Confidence 88853 36999999999999887655433
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. |
| >TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase | Back alignment and domain information |
|---|
Probab=99.28 E-value=4.5e-10 Score=108.55 Aligned_cols=137 Identities=12% Similarity=0.113 Sum_probs=84.9
Q ss_pred CeEEEEEeccccccCHHHHHHHHHHHHhC-----CCCEEEEEcCCCCCCCCCCCchhHHHHh--cCCceeecccchh---
Q 012314 269 SSVVYVSFGSFTILDQVQFQELALGLELC-----KRPFLWVVRPDITTDANDRYPEGFQERV--AARGQMISWAPQL--- 338 (466)
Q Consensus 269 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~-----~~~~i~~~~~~~~~~~~~~~~~~~~~~~--~~n~~~~~~~p~~--- 338 (466)
+..++++.+-... ..+.+..+++++..+ +.++++...++ ......+.+.. .+++.+.+.+++.
T Consensus 197 ~~~vl~~~hr~~~-~~k~~~~ll~a~~~l~~~~~~~~~vi~~~~~------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 269 (365)
T TIGR00236 197 KRYILLTLHRREN-VGEPLENIFKAIREIVEEFEDVQIVYPVHLN------PVVREPLHKHLGDSKRVHLIEPLEYLDFL 269 (365)
T ss_pred CCEEEEecCchhh-hhhHHHHHHHHHHHHHHHCCCCEEEEECCCC------hHHHHHHHHHhCCCCCEEEECCCChHHHH
Confidence 3466665543211 123466677776543 34556554332 11122222222 3577777766643
Q ss_pred hhhcCCCcccceeccCCchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCH
Q 012314 339 RVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQ 418 (466)
Q Consensus 339 ~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~ 418 (466)
.++.++++ +|+..|.. +.||+++|+|+|.++..++++. +.+. |.+..+. .++++|.+++.++++|+
T Consensus 270 ~~l~~ad~--vv~~Sg~~-~~EA~a~g~PvI~~~~~~~~~e----~~~~-g~~~lv~------~d~~~i~~ai~~ll~~~ 335 (365)
T TIGR00236 270 NLAANSHL--ILTDSGGV-QEEAPSLGKPVLVLRDTTERPE----TVEA-GTNKLVG------TDKENITKAAKRLLTDP 335 (365)
T ss_pred HHHHhCCE--EEECChhH-HHHHHHcCCCEEECCCCCCChH----HHhc-CceEEeC------CCHHHHHHHHHHHHhCh
Confidence 56766666 89877644 7999999999999876555543 2233 7776663 27899999999999988
Q ss_pred HHHHHHHH
Q 012314 419 DFKARALE 426 (466)
Q Consensus 419 ~~r~~a~~ 426 (466)
+.+++...
T Consensus 336 ~~~~~~~~ 343 (365)
T TIGR00236 336 DEYKKMSN 343 (365)
T ss_pred HHHHHhhh
Confidence 77776543
|
Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other. |
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.26 E-value=5.5e-09 Score=100.83 Aligned_cols=83 Identities=14% Similarity=0.246 Sum_probs=62.1
Q ss_pred cCCceeecccchhh---hhcCCCcccceec----cCCchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCC
Q 012314 326 AARGQMISWAPQLR---VLNHPSIACFLSH----CGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDE 398 (466)
Q Consensus 326 ~~n~~~~~~~p~~~---ll~~~~~~~~i~h----gG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~ 398 (466)
.+++.+.+++|+.+ ++..+++ +|.. +...++.||+++|+|+|+.. ....+..+.+. +.|..++.
T Consensus 258 ~~~v~~~g~~~~~~~~~~~~~ad~--~l~~s~~e~~~~~~~Ea~~~g~PvI~~~----~~~~~~~i~~~-~~g~~~~~-- 328 (374)
T cd03817 258 ADRVIFTGFVPREELPDYYKAADL--FVFASTTETQGLVLLEAMAAGLPVVAVD----APGLPDLVADG-ENGFLFPP-- 328 (374)
T ss_pred CCcEEEeccCChHHHHHHHHHcCE--EEecccccCcChHHHHHHHcCCcEEEeC----CCChhhheecC-ceeEEeCC--
Confidence 46788889998754 6777777 6633 33478999999999999874 45566777763 78888853
Q ss_pred CCCcCHHHHHHHHHHHhcCHHHH
Q 012314 399 GGIITREEIKNKVDQVLGNQDFK 421 (466)
Q Consensus 399 ~~~~~~~~l~~~i~~ll~~~~~r 421 (466)
. +. ++.+++.+++++++.+
T Consensus 329 -~--~~-~~~~~i~~l~~~~~~~ 347 (374)
T cd03817 329 -G--DE-ALAEALLRLLQDPELR 347 (374)
T ss_pred -C--CH-HHHHHHHHHHhChHHH
Confidence 2 22 8999999999887654
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. |
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.25 E-value=1.2e-08 Score=97.33 Aligned_cols=94 Identities=13% Similarity=0.137 Sum_probs=64.4
Q ss_pred CCceeecccch-hhhhcCCCcccceecc----CCchhhhhhhcCcceeecccccchhhhHHHHHHhhh-ceeEeecCCCC
Q 012314 327 ARGQMISWAPQ-LRVLNHPSIACFLSHC----GWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWK-VGLKFDRDEGG 400 (466)
Q Consensus 327 ~n~~~~~~~p~-~~ll~~~~~~~~i~hg----G~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G-~G~~l~~~~~~ 400 (466)
.++.+.++... ..++..+++ +|.-. ..+++.||+++|+|+|+.+..+.+.. +.+. | .|..++
T Consensus 235 ~~v~~~g~~~~~~~~~~~ad~--~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~----~~~~-~~~g~~~~----- 302 (348)
T cd03820 235 DRVILLGFTKNIEEYYAKASI--FVLTSRFEGFPMVLLEAMAFGLPVISFDCPTGPSE----IIED-GVNGLLVP----- 302 (348)
T ss_pred CeEEEcCCcchHHHHHHhCCE--EEeCccccccCHHHHHHHHcCCCEEEecCCCchHh----hhcc-CcceEEeC-----
Confidence 45666666333 458877776 66543 24689999999999998865443332 3332 5 888884
Q ss_pred CcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Q 012314 401 IITREEIKNKVDQVLGNQDFKARALELKEKAM 432 (466)
Q Consensus 401 ~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~ 432 (466)
.-+.+++.++|.++++|++.++++.+-++.+.
T Consensus 303 ~~~~~~~~~~i~~ll~~~~~~~~~~~~~~~~~ 334 (348)
T cd03820 303 NGDVEALAEALLRLMEDEELRKRMGANARESA 334 (348)
T ss_pred CCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 34689999999999999987776655444333
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. |
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.23 E-value=1.1e-08 Score=98.85 Aligned_cols=112 Identities=12% Similarity=0.055 Sum_probs=71.7
Q ss_pred cCCceeecccc-hh---hhhcCCCcccceec----cCCchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecC
Q 012314 326 AARGQMISWAP-QL---RVLNHPSIACFLSH----CGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRD 397 (466)
Q Consensus 326 ~~n~~~~~~~p-~~---~ll~~~~~~~~i~h----gG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~ 397 (466)
..++.+.+|++ +. .++..+++ +|.- |..+++.||+++|+|+|+... ......+.+. +.|..++
T Consensus 243 ~~~v~~~g~~~~~~~~~~~~~~ad~--~l~ps~~e~~g~~~~Eam~~g~PvI~~~~----~~~~e~~~~~-~~g~~~~-- 313 (365)
T cd03825 243 PFPVHYLGSLNDDESLALIYSAADV--FVVPSLQENFPNTAIEALACGTPVVAFDV----GGIPDIVDHG-VTGYLAK-- 313 (365)
T ss_pred CCceEecCCcCCHHHHHHHHHhCCE--EEeccccccccHHHHHHHhcCCCEEEecC----CCChhheeCC-CceEEeC--
Confidence 45677789998 43 46877776 7764 335789999999999998743 3444445552 5777774
Q ss_pred CCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Q 012314 398 EGGIITREEIKNKVDQVLGNQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWV 452 (466)
Q Consensus 398 ~~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~ 452 (466)
..+.+++.+++.++++|++.+++..+ ..++.+.+.-+.....+++++-+
T Consensus 314 ---~~~~~~~~~~l~~l~~~~~~~~~~~~---~~~~~~~~~~s~~~~~~~~~~~y 362 (365)
T cd03825 314 ---PGDPEDLAEGIEWLLADPDEREELGE---AARELAENEFDSRVQAKRYLSLY 362 (365)
T ss_pred ---CCCHHHHHHHHHHHHhCHHHHHHHHH---HHHHHHHHhcCHHHHHHHHHHHH
Confidence 35789999999999988864443332 22222222344444555555444
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. |
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.9e-08 Score=98.31 Aligned_cols=86 Identities=14% Similarity=0.103 Sum_probs=61.9
Q ss_pred cCCceeecccchh---hhhcCCCcccceec---cC-CchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCC
Q 012314 326 AARGQMISWAPQL---RVLNHPSIACFLSH---CG-WNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDE 398 (466)
Q Consensus 326 ~~n~~~~~~~p~~---~ll~~~~~~~~i~h---gG-~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~ 398 (466)
.+++.+.+++|.. .++..+++ ++.. -| ..++.||+++|+|+|+.-. ......+.+. +.|....
T Consensus 279 ~~~V~f~g~~~~~~~~~~l~~ad~--~l~~s~~E~~g~~~lEAma~G~PvI~s~~----~~~~e~i~~~-~~g~~~~--- 348 (392)
T cd03805 279 EDQVIFLPSISDSQKELLLSSARA--LLYTPSNEHFGIVPLEAMYAGKPVIACNS----GGPLETVVDG-ETGFLCE--- 348 (392)
T ss_pred CceEEEeCCCChHHHHHHHhhCeE--EEECCCcCCCCchHHHHHHcCCCEEEECC----CCcHHHhccC-CceEEeC---
Confidence 3678888999976 46777777 5532 22 3577999999999999743 3344556653 6787763
Q ss_pred CCCcCHHHHHHHHHHHhcCHHHHHHH
Q 012314 399 GGIITREEIKNKVDQVLGNQDFKARA 424 (466)
Q Consensus 399 ~~~~~~~~l~~~i~~ll~~~~~r~~a 424 (466)
. +.++++++|.+++++++.+++.
T Consensus 349 --~-~~~~~a~~i~~l~~~~~~~~~~ 371 (392)
T cd03805 349 --P-TPEEFAEAMLKLANDPDLADRM 371 (392)
T ss_pred --C-CHHHHHHHHHHHHhChHHHHHH
Confidence 2 6899999999999988655443
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. |
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.22 E-value=2.3e-08 Score=96.28 Aligned_cols=314 Identities=15% Similarity=0.048 Sum_probs=161.6
Q ss_pred CccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCC-CCCccHHHHHHHHHHhccH
Q 012314 13 AQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPW-EDRNDLGKLIEKCLQVMPG 91 (466)
Q Consensus 13 ~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 91 (466)
..|+......+++.|.+.||+|++++............ ............... ........... ....
T Consensus 13 ~~g~~~~~~~~~~~l~~~g~~v~v~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 81 (377)
T cd03798 13 NGGGGIFVKELARALAKRGVEVTVLAPGPWGPKLLDLL-------KGRLVGVERLPVLLPVVPLLKGPLLYL----LAAR 81 (377)
T ss_pred CchHHHHHHHHHHHHHHCCCceEEEecCCCCCCchhhc-------ccccccccccccCcchhhccccchhHH----HHHH
Confidence 47888899999999999999999999875443322210 000000000000000 00000000111 1112
Q ss_pred HHHHHHHHHhcCCCCCccEEEeCCCch---hHHHHHHHcCCceEEeccchhHHHHHHhhcccccccCccCCCCCCCcccc
Q 012314 92 KLEELIEEINSREDEKIDCFIADGNIG---WSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSHGTPMSMQM 168 (466)
Q Consensus 92 ~~~~ll~~l~~~~~~~~DlvV~D~~~~---~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 168 (466)
.+..+++. .. .++|+|++..... .+..+++..++|++........
T Consensus 82 ~~~~~l~~-~~---~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~---------------------------- 129 (377)
T cd03798 82 ALLKLLKL-KR---FRPDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDV---------------------------- 129 (377)
T ss_pred HHHHHHhc-cc---CCCCEEEEeccchHHHHHHHHHHhcCCCEEEEeecchh----------------------------
Confidence 23334431 02 7899999886443 3445667778898875532221
Q ss_pred ccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHHHh--hcCCcceeccccCCCCCC
Q 012314 169 FRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFT--TFPELLPIGPLLASNRLG 246 (466)
Q Consensus 169 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~~~--~~p~v~~VGpl~~~~~~~ 246 (466)
....... ...... ......++.+++.+...-+.-..- ...++..++.........
T Consensus 130 -----------------~~~~~~~---~~~~~~---~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 186 (377)
T cd03798 130 -----------------NLLPRKR---LLRALL---RRALRRADAVIAVSEALADELKALGIDPEKVTVIPNGVDTERFS 186 (377)
T ss_pred -----------------cccCchh---hHHHHH---HHHHhcCCeEEeCCHHHHHHHHHhcCCCCceEEcCCCcCcccCC
Confidence 0000000 001111 113467888888887665543221 123455554333222111
Q ss_pred CCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhC---CCCEEEEEcCCCCCCCCCCCchhHHH
Q 012314 247 NTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELC---KRPFLWVVRPDITTDANDRYPEGFQE 323 (466)
Q Consensus 247 ~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~ 323 (466)
+....-..-.. ...+..+++..|+... ......+++++... +..+.+.+.+.. ...+.+.+
T Consensus 187 -------~~~~~~~~~~~-~~~~~~~i~~~g~~~~--~k~~~~li~~~~~~~~~~~~~~l~i~g~~------~~~~~~~~ 250 (377)
T cd03798 187 -------PADRAEARKLG-LPEDKKVILFVGRLVP--RKGIDYLIEALARLLKKRPDVHLVIVGDG------PLREALEA 250 (377)
T ss_pred -------CcchHHHHhcc-CCCCceEEEEeccCcc--ccCHHHHHHHHHHHHhcCCCeEEEEEcCC------cchHHHHH
Confidence 00000000011 1223467777787532 22334444444332 234433333220 11122222
Q ss_pred H-----hcCCceeecccchh---hhhcCCCccccee----ccCCchhhhhhhcCcceeecccccchhhhHHHHHHhhhce
Q 012314 324 R-----VAARGQMISWAPQL---RVLNHPSIACFLS----HCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVG 391 (466)
Q Consensus 324 ~-----~~~n~~~~~~~p~~---~ll~~~~~~~~i~----hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G 391 (466)
. ..+|+.+.+++++. .++..+++ +|. -|..+++.||+++|+|+|+.+. ......+.+ .+.|
T Consensus 251 ~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~----~~~~~~~~~-~~~g 323 (377)
T cd03798 251 LAAELGLEDRVTFLGAVPHEEVPAYYAAADV--FVLPSLREGFGLVLLEAMACGLPVVATDV----GGIPEIITD-GENG 323 (377)
T ss_pred HHHhcCCcceEEEeCCCCHHHHHHHHHhcCe--eecchhhccCChHHHHHHhcCCCEEEecC----CChHHHhcC-Ccce
Confidence 2 24688888999875 46766776 552 3456788999999999998754 345556666 3667
Q ss_pred eEeecCCCCCcCHHHHHHHHHHHhcCHHH
Q 012314 392 LKFDRDEGGIITREEIKNKVDQVLGNQDF 420 (466)
Q Consensus 392 ~~l~~~~~~~~~~~~l~~~i~~ll~~~~~ 420 (466)
...+ .-+.+++.++|.++++++..
T Consensus 324 ~~~~-----~~~~~~l~~~i~~~~~~~~~ 347 (377)
T cd03798 324 LLVP-----PGDPEALAEAILRLLADPWL 347 (377)
T ss_pred eEEC-----CCCHHHHHHHHHHHhcCcHH
Confidence 7774 35799999999999988764
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. |
| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.21 E-value=3.4e-08 Score=97.24 Aligned_cols=163 Identities=7% Similarity=0.060 Sum_probs=95.8
Q ss_pred eEEEEEeccccccCHHHHHHHHHHHHhCC----CCEEEEEcCCCCCCCCCCCchhHHHH----hcCCceeecccchh---
Q 012314 270 SVVYVSFGSFTILDQVQFQELALGLELCK----RPFLWVVRPDITTDANDRYPEGFQER----VAARGQMISWAPQL--- 338 (466)
Q Consensus 270 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~----~~~i~~~~~~~~~~~~~~~~~~~~~~----~~~n~~~~~~~p~~--- 338 (466)
..+++..|+.. +...+..+++++..+. .+++ .+|.+ ...+.+.+. ..+|+.+.+|+|+.
T Consensus 229 ~~~i~~~G~l~--~~kg~~~li~a~~~l~~~~~~~l~-ivG~g-------~~~~~l~~~~~~~~l~~v~f~G~~~~~~~~ 298 (412)
T PRK10307 229 KKIVLYSGNIG--EKQGLELVIDAARRLRDRPDLIFV-ICGQG-------GGKARLEKMAQCRGLPNVHFLPLQPYDRLP 298 (412)
T ss_pred CEEEEEcCccc--cccCHHHHHHHHHHhccCCCeEEE-EECCC-------hhHHHHHHHHHHcCCCceEEeCCCCHHHHH
Confidence 35666677653 3344555666665432 3333 34433 122333221 12578888999865
Q ss_pred hhhcCCCcccceeccCC------chhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHH
Q 012314 339 RVLNHPSIACFLSHCGW------NSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVD 412 (466)
Q Consensus 339 ~ll~~~~~~~~i~hgG~------~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~ 412 (466)
.+++.+++-++.+..+. +.+.|++++|+|+|+....+. .....+ + +.|..+++ -+.++|+++|.
T Consensus 299 ~~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~--~~~~~i-~--~~G~~~~~-----~d~~~la~~i~ 368 (412)
T PRK10307 299 ALLKMADCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGT--ELGQLV-E--GIGVCVEP-----ESVEALVAAIA 368 (412)
T ss_pred HHHHhcCEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCc--hHHHHH-h--CCcEEeCC-----CCHHHHHHHHH
Confidence 47878887444444332 236899999999999864331 112222 2 67888743 46899999999
Q ss_pred HHhcCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHh
Q 012314 413 QVLGNQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVKTN 455 (466)
Q Consensus 413 ~ll~~~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~ 455 (466)
++++|++.+++.. +..++.+.+.-+....++++++.+.+.
T Consensus 369 ~l~~~~~~~~~~~---~~a~~~~~~~fs~~~~~~~~~~~~~~~ 408 (412)
T PRK10307 369 ALARQALLRPKLG---TVAREYAERTLDKENVLRQFIADIRGL 408 (412)
T ss_pred HHHhCHHHHHHHH---HHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 9998876655433 333333333556666666666666544
|
|
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.19 E-value=5e-08 Score=95.84 Aligned_cols=112 Identities=15% Similarity=0.077 Sum_probs=74.8
Q ss_pred CCceeecccchh---hhhcCCCccccee---ccC-CchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCC
Q 012314 327 ARGQMISWAPQL---RVLNHPSIACFLS---HCG-WNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEG 399 (466)
Q Consensus 327 ~n~~~~~~~p~~---~ll~~~~~~~~i~---hgG-~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~ 399 (466)
+++.+.+++|+. ++|..+++ +|. +.| ..++.||+++|+|+|+.. .......+.+. +.|..++
T Consensus 283 ~~v~~~g~~~~~~~~~~l~~ad~--~v~ps~~E~~g~~~lEAma~G~Pvi~~~----~~~~~e~i~~~-~~g~~~~---- 351 (405)
T TIGR03449 283 DRVRFLPPRPPEELVHVYRAADV--VAVPSYNESFGLVAMEAQACGTPVVAAR----VGGLPVAVADG-ETGLLVD---- 351 (405)
T ss_pred ceEEECCCCCHHHHHHHHHhCCE--EEECCCCCCcChHHHHHHHcCCCEEEec----CCCcHhhhccC-CceEECC----
Confidence 578888999864 57877777 663 233 358999999999999974 34455566663 6788774
Q ss_pred CCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Q 012314 400 GIITREEIKNKVDQVLGNQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVKT 454 (466)
Q Consensus 400 ~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~ 454 (466)
.-+.++++++|.+++++++.++++..-+....+ .-+-....+++++.+..
T Consensus 352 -~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~----~fsw~~~~~~~~~~y~~ 401 (405)
T TIGR03449 352 -GHDPADWADALARLLDDPRTRIRMGAAAVEHAA----GFSWAATADGLLSSYRD 401 (405)
T ss_pred -CCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH----hCCHHHHHHHHHHHHHH
Confidence 347899999999999987766555444333322 33434444555544443
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. |
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.18 E-value=3.6e-08 Score=94.88 Aligned_cols=137 Identities=12% Similarity=0.121 Sum_probs=87.8
Q ss_pred eEEEEEeccccccCHHHHHHHHHHHHhCC-CCEEEEEcCCCCCCCCCCCchhHHH-----HhcCCceeecccchh---hh
Q 012314 270 SVVYVSFGSFTILDQVQFQELALGLELCK-RPFLWVVRPDITTDANDRYPEGFQE-----RVAARGQMISWAPQL---RV 340 (466)
Q Consensus 270 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~-----~~~~n~~~~~~~p~~---~l 340 (466)
..+++..|+.. +......+++++.++. .++++...+. ..+.+.+ ...+|+.+.+|+|+. .+
T Consensus 191 ~~~i~~~G~~~--~~K~~~~li~a~~~l~~~~l~i~G~g~--------~~~~~~~~~~~~~~~~~V~~~g~v~~~~~~~~ 260 (357)
T cd03795 191 RPFFLFVGRLV--YYKGLDVLLEAAAALPDAPLVIVGEGP--------LEAELEALAAALGLLDRVRFLGRLDDEEKAAL 260 (357)
T ss_pred CcEEEEecccc--cccCHHHHHHHHHhccCcEEEEEeCCh--------hHHHHHHHHHhcCCcceEEEcCCCCHHHHHHH
Confidence 36677778653 3345667778887776 4444443222 1122222 124789999999974 47
Q ss_pred hcCCCccccee---ccCC-chhhhhhhcCcceeecccccchhhhHHHHHH-hhhceeEeecCCCCCcCHHHHHHHHHHHh
Q 012314 341 LNHPSIACFLS---HCGW-NSTMEGVSNGIPFLCWPYFGDQFLNERYICD-FWKVGLKFDRDEGGIITREEIKNKVDQVL 415 (466)
Q Consensus 341 l~~~~~~~~i~---hgG~-~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~-~~G~G~~l~~~~~~~~~~~~l~~~i~~ll 415 (466)
+..+++-++.+ +.|. .++.||+++|+|+|+....+.. ..+.+ . +.|..++ .-+.+++.++|.+++
T Consensus 261 ~~~ad~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~----~~i~~~~-~~g~~~~-----~~d~~~~~~~i~~l~ 330 (357)
T cd03795 261 LAACDVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGG----SYVNLHG-VTGLVVP-----PGDPAALAEAIRRLL 330 (357)
T ss_pred HHhCCEEEeCCcccccccchHHHHHHHcCCCEEecCCCCch----hHHhhCC-CceEEeC-----CCCHHHHHHHHHHHH
Confidence 77677733333 2343 4789999999999998544443 33332 3 7788774 347999999999999
Q ss_pred cCHHHHHHHHH
Q 012314 416 GNQDFKARALE 426 (466)
Q Consensus 416 ~~~~~r~~a~~ 426 (466)
+|++.+++..+
T Consensus 331 ~~~~~~~~~~~ 341 (357)
T cd03795 331 EDPELRERLGE 341 (357)
T ss_pred HCHHHHHHHHH
Confidence 99866554443
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) | Back alignment and domain information |
|---|
Probab=99.16 E-value=2.9e-09 Score=102.94 Aligned_cols=136 Identities=15% Similarity=0.116 Sum_probs=86.4
Q ss_pred CeEEEEEecccccc-CHHHHHHHHHHHHhCCC-CEEEEEcCCCCCCCCCCCchhHHHH---h---cCCceeecccchh--
Q 012314 269 SSVVYVSFGSFTIL-DQVQFQELALGLELCKR-PFLWVVRPDITTDANDRYPEGFQER---V---AARGQMISWAPQL-- 338 (466)
Q Consensus 269 ~~~v~vs~Gs~~~~-~~~~~~~~~~a~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~---~---~~n~~~~~~~p~~-- 338 (466)
++.+++++|..... ..+.+..+++++..+.. ++.+++.++ +...+.+.+. . .+++.+.++.++.
T Consensus 198 ~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~~~~vi~~~~------~~~~~~l~~~~~~~~~~~~~v~~~~~~~~~~~ 271 (363)
T cd03786 198 KKYILVTLHRVENVDDGEQLEEILEALAELAEEDVPVVFPNH------PRTRPRIREAGLEFLGHHPNVLLISPLGYLYF 271 (363)
T ss_pred CCEEEEEeCCccccCChHHHHHHHHHHHHHHhcCCEEEEECC------CChHHHHHHHHHhhccCCCCEEEECCcCHHHH
Confidence 55788888765322 45667788888866543 244444333 1112233221 2 3577777655543
Q ss_pred -hhhcCCCcccceeccCCchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcC
Q 012314 339 -RVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGN 417 (466)
Q Consensus 339 -~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~ 417 (466)
.++..+++ ||+..| |.+.||++.|+|+|+++.. |. +..+.+ .|++..+. -+.++|.++|.+++++
T Consensus 272 ~~l~~~ad~--~v~~Sg-gi~~Ea~~~g~PvI~~~~~--~~--~~~~~~-~g~~~~~~------~~~~~i~~~i~~ll~~ 337 (363)
T cd03786 272 LLLLKNADL--VLTDSG-GIQEEASFLGVPVLNLRDR--TE--RPETVE-SGTNVLVG------TDPEAILAAIEKLLSD 337 (363)
T ss_pred HHHHHcCcE--EEEcCc-cHHhhhhhcCCCEEeeCCC--Cc--cchhhh-eeeEEecC------CCHHHHHHHHHHHhcC
Confidence 46766666 999998 7788999999999998643 22 223344 37766652 1589999999999988
Q ss_pred HHHHHHH
Q 012314 418 QDFKARA 424 (466)
Q Consensus 418 ~~~r~~a 424 (466)
+..+++.
T Consensus 338 ~~~~~~~ 344 (363)
T cd03786 338 EFAYSLM 344 (363)
T ss_pred chhhhcC
Confidence 7655543
|
The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st |
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.11 E-value=2.9e-07 Score=88.68 Aligned_cols=89 Identities=12% Similarity=0.037 Sum_probs=62.6
Q ss_pred cCCceeecccchh---hhhcCCCcccceec---cC-CchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCC
Q 012314 326 AARGQMISWAPQL---RVLNHPSIACFLSH---CG-WNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDE 398 (466)
Q Consensus 326 ~~n~~~~~~~p~~---~ll~~~~~~~~i~h---gG-~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~ 398 (466)
.+++.+.+|+++. .++..+++ +|.- .| .+++.||+++|+|+|+.+ .......+.+ +.|.....
T Consensus 261 ~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~PvI~~~----~~~~~~~~~~--~~~~~~~~-- 330 (375)
T cd03821 261 EDRVTFTGMLYGEDKAAALADADL--FVLPSHSENFGIVVAEALACGTPVVTTD----KVPWQELIEY--GCGWVVDD-- 330 (375)
T ss_pred cceEEEcCCCChHHHHHHHhhCCE--EEeccccCCCCcHHHHHHhcCCCEEEcC----CCCHHHHhhc--CceEEeCC--
Confidence 4678888999964 36777777 5542 22 468899999999999975 3445555543 77777742
Q ss_pred CCCcCHHHHHHHHHHHhcCHHHHHHHHHHH
Q 012314 399 GGIITREEIKNKVDQVLGNQDFKARALELK 428 (466)
Q Consensus 399 ~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~ 428 (466)
+.+++.++|.+++++++.+++..+-+
T Consensus 331 ----~~~~~~~~i~~l~~~~~~~~~~~~~~ 356 (375)
T cd03821 331 ----DVDALAAALRRALELPQRLKAMGENG 356 (375)
T ss_pred ----ChHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 34999999999999875555444333
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. |
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.10 E-value=6.5e-08 Score=93.58 Aligned_cols=87 Identities=17% Similarity=0.192 Sum_probs=64.7
Q ss_pred cCCceeecccchh---hhhcCCCcccceec----------cCCchhhhhhhcCcceeecccccchhhhHHHHHHhhhcee
Q 012314 326 AARGQMISWAPQL---RVLNHPSIACFLSH----------CGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGL 392 (466)
Q Consensus 326 ~~n~~~~~~~p~~---~ll~~~~~~~~i~h----------gG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~ 392 (466)
.+++.+.+++|+. .+++.+++ +|.- |..+++.||+++|+|+|+.+.. .++..+.+. +.|.
T Consensus 244 ~~~v~~~g~~~~~~l~~~~~~ad~--~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~----~~~e~i~~~-~~g~ 316 (367)
T cd05844 244 GGRVTFLGAQPHAEVRELMRRARI--FLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHG----GIPEAVEDG-ETGL 316 (367)
T ss_pred CCeEEECCCCCHHHHHHHHHhCCE--EEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCC----CchhheecC-CeeE
Confidence 4677788999865 46877777 5532 2357899999999999988654 356666663 7888
Q ss_pred EeecCCCCCcCHHHHHHHHHHHhcCHHHHHHH
Q 012314 393 KFDRDEGGIITREEIKNKVDQVLGNQDFKARA 424 (466)
Q Consensus 393 ~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a 424 (466)
.++ .-+.+++.++|.++++|++.+++.
T Consensus 317 ~~~-----~~d~~~l~~~i~~l~~~~~~~~~~ 343 (367)
T cd05844 317 LVP-----EGDVAALAAALGRLLADPDLRARM 343 (367)
T ss_pred EEC-----CCCHHHHHHHHHHHHcCHHHHHHH
Confidence 884 347899999999999988655543
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=99.07 E-value=2.5e-07 Score=97.17 Aligned_cols=389 Identities=11% Similarity=0.067 Sum_probs=195.6
Q ss_pred cCHHHHHHHHHHHHhCC--CEEEEEeCCcchHHHHHh-hh--------------cCCCCCCCeEEEecCCCCCCC-CCCc
Q 012314 15 GHVIPLLEFSQCLAKHG--FRVTFVNTDYNHKRVVES-LQ--------------GKNYLGEQIHLVSIPDGMEPW-EDRN 76 (466)
Q Consensus 15 GH~~p~l~la~~L~~rG--h~Vt~~~~~~~~~~~~~~-~~--------------~~~~~~~~~~~~~~~~~~~~~-~~~~ 76 (466)
|+..=.+.||++|+++| |+|.++|-...-..+... .. ......++.+.+.+|-+-... -...
T Consensus 196 Gq~vYV~ELAraLa~~~gv~~Vdl~TR~~~~~~~~~~y~~p~e~~~~~~~~~~~~~~~~~~g~rIvRip~GP~~~~l~Ke 275 (1050)
T TIGR02468 196 GQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDWSYGEPTEMLTPRSSENDGDEMGESSGAYIIRIPFGPRDKYIPKE 275 (1050)
T ss_pred ChHHHHHHHHHHHHhCCCCCEEEEEeCCcCccccccccCCccccccccccccccccccCCCCeEEEEeccCCCCCCcCHH
Confidence 56666789999999998 999999986432211000 00 001123588888888654322 1233
Q ss_pred cHHHHHHHHHHhccHHHHHH----HHHHhcCCCCCccEEEeCCCch--hHHHHHHHcCCceEEeccchhHHHHHHhhccc
Q 012314 77 DLGKLIEKCLQVMPGKLEEL----IEEINSREDEKIDCFIADGNIG--WSMEIAKKMNVRGAVFWPSSAASVALVFRIPK 150 (466)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~l----l~~l~~~~~~~~DlvV~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~ 150 (466)
.+...+..|...+...++++ .+.+.......||+|-+-+... .+..+++.+|||+|.+.++.........
T Consensus 276 ~L~~~l~ef~d~~l~~~~~~~~~~~~~~~~~~~~~pDvIHaHyw~sG~aa~~L~~~lgVP~V~T~HSLgr~K~~~l---- 351 (1050)
T TIGR02468 276 ELWPYIPEFVDGALSHIVNMSKVLGEQIGSGHPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRDKLEQL---- 351 (1050)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCEEEECcchHHHHHHHHHHhhCCCEEEECccchhhhhhhh----
Confidence 34555555554444443332 2222211113599999876443 6778999999999988765332100000
Q ss_pred ccccCccCCCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHHHhh-
Q 012314 151 LIDDGIIDSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTT- 229 (466)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~~~~- 229 (466)
... +.. ...... ..+ .....+......+..++.++.+|..+.+.-..-+
T Consensus 352 -l~~-------------------g~~--~~~~~~-~~y-------~~~~Ri~~Ee~~l~~Ad~VIasT~qE~~eq~~lY~ 401 (1050)
T TIGR02468 352 -LKQ-------------------GRM--SKEEIN-STY-------KIMRRIEAEELSLDASEIVITSTRQEIEEQWGLYD 401 (1050)
T ss_pred -ccc-------------------ccc--cccccc-ccc-------chHHHHHHHHHHHHhcCEEEEeCHHHHHHHHHHhc
Confidence 000 000 000000 000 0001111111235789999999988876321110
Q ss_pred ------------------------cCCcceeccccC----CCCCCCCC-----------CCcccCCccchhhhccCCCCe
Q 012314 230 ------------------------FPELLPIGPLLA----SNRLGNTA-----------GYFWCEDSNCLKWLDQQQPSS 270 (466)
Q Consensus 230 ------------------------~p~v~~VGpl~~----~~~~~~~~-----------~~~~~~~~~l~~~~~~~~~~~ 270 (466)
.+++..|.|=.. .+...... ....+...++..|+.. +++
T Consensus 402 ~~~~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~~~~~~~~~~~~~l~r~~~~-pdk- 479 (1050)
T TIGR02468 402 GFDVILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPAKPDPPIWSEIMRFFTN-PRK- 479 (1050)
T ss_pred cCCchhhhhhhhhhcccccccccCCCCeEEeCCCCcHHHccCCCccccchhcccccccccccchhhHHHHhhccc-CCC-
Confidence 123333322111 01000000 0000111234445543 333
Q ss_pred EEEEEeccccccCHHHHHHHHHHHHhCC-----CCEEEEEcCCCCCCCCC----CCchhHH---HHh--cCCceeecccc
Q 012314 271 VVYVSFGSFTILDQVQFQELALGLELCK-----RPFLWVVRPDITTDAND----RYPEGFQ---ERV--AARGQMISWAP 336 (466)
Q Consensus 271 ~v~vs~Gs~~~~~~~~~~~~~~a~~~~~-----~~~i~~~~~~~~~~~~~----~~~~~~~---~~~--~~n~~~~~~~p 336 (466)
++++..|... +......+++|+..+. ..+.+++++..+..... .....+. ++. .+++.+.++++
T Consensus 480 pvIL~VGRL~--p~KGi~~LIeAf~~L~~l~~~~nL~LIiG~gdd~d~l~~~~~~~l~~L~~li~~lgL~g~V~FlG~v~ 557 (1050)
T TIGR02468 480 PMILALARPD--PKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSSGSSSVLTSVLKLIDKYDLYGQVAYPKHHK 557 (1050)
T ss_pred cEEEEEcCCc--cccCHHHHHHHHHHhHhhccCCCEEEEEecCchhhhhhccchHHHHHHHHHHHHhCCCCeEEecCCCC
Confidence 4556667642 3444566777775442 24544555431100000 0001121 122 35677778887
Q ss_pred hhh---hhcCCC--cccceec---cCC-chhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCCCCcCHHHH
Q 012314 337 QLR---VLNHPS--IACFLSH---CGW-NSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEI 407 (466)
Q Consensus 337 ~~~---ll~~~~--~~~~i~h---gG~-~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l 407 (466)
+.+ ++..++ .++||.- =|. .+++||+++|+|+|+.... .....+.. -.-|..+++ -+++.|
T Consensus 558 ~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvG----G~~EII~~-g~nGlLVdP-----~D~eaL 627 (1050)
T TIGR02468 558 QSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNG----GPVDIHRV-LDNGLLVDP-----HDQQAI 627 (1050)
T ss_pred HHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCC----CcHHHhcc-CCcEEEECC-----CCHHHH
Confidence 654 555442 1237663 343 5789999999999998543 34444544 256888854 478999
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHh
Q 012314 408 KNKVDQVLGNQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVKTN 455 (466)
Q Consensus 408 ~~~i~~ll~~~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~ 455 (466)
+++|.++++|++.++++.+-+.+... .-+-...+++.++.+...
T Consensus 628 A~AL~~LL~Dpelr~~m~~~gr~~v~----~FSWe~ia~~yl~~i~~~ 671 (1050)
T TIGR02468 628 ADALLKLVADKQLWAECRQNGLKNIH----LFSWPEHCKTYLSRIASC 671 (1050)
T ss_pred HHHHHHHhhCHHHHHHHHHHHHHHHH----HCCHHHHHHHHHHHHHHH
Confidence 99999999998776665544333322 234455555555555544
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Probab=99.05 E-value=5.2e-07 Score=89.38 Aligned_cols=88 Identities=14% Similarity=0.091 Sum_probs=61.1
Q ss_pred cCCceeecccchhh---hhcCC--Ccccceec----cCCchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeec
Q 012314 326 AARGQMISWAPQLR---VLNHP--SIACFLSH----CGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDR 396 (466)
Q Consensus 326 ~~n~~~~~~~p~~~---ll~~~--~~~~~i~h----gG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~ 396 (466)
.+++.+.+++++.+ ++..+ ++++||.. |-..+++||+++|+|+|+.. .......+.+. ..|..+++
T Consensus 316 ~~~V~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~----~gg~~eiv~~~-~~G~lv~~ 390 (439)
T TIGR02472 316 YGKVAYPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACGLPIVATD----DGGPRDIIANC-RNGLLVDV 390 (439)
T ss_pred CceEEecCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhCCCEEEeC----CCCcHHHhcCC-CcEEEeCC
Confidence 35666777777654 45544 22347754 33468999999999999884 44455666552 57888753
Q ss_pred CCCCCcCHHHHHHHHHHHhcCHHHHHH
Q 012314 397 DEGGIITREEIKNKVDQVLGNQDFKAR 423 (466)
Q Consensus 397 ~~~~~~~~~~l~~~i~~ll~~~~~r~~ 423 (466)
-++++|+++|.++++|++.+++
T Consensus 391 -----~d~~~la~~i~~ll~~~~~~~~ 412 (439)
T TIGR02472 391 -----LDLEAIASALEDALSDSSQWQL 412 (439)
T ss_pred -----CCHHHHHHHHHHHHhCHHHHHH
Confidence 4789999999999998865543
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. |
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.04 E-value=3.5e-07 Score=89.59 Aligned_cols=114 Identities=15% Similarity=0.051 Sum_probs=72.8
Q ss_pred cCCceeecccchh---hhhcCCCccccee---ccCCc-hhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCC
Q 012314 326 AARGQMISWAPQL---RVLNHPSIACFLS---HCGWN-STMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDE 398 (466)
Q Consensus 326 ~~n~~~~~~~p~~---~ll~~~~~~~~i~---hgG~~-s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~ 398 (466)
.+++.+.+|+|+. .++..+++ +|. +-|.| ++.||+++|+|+|+.+..+ ....+.+ |.+....
T Consensus 249 ~~~v~~~G~~~~~~~~~~l~~ad~--~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg----~~e~i~~--~~~~~~~--- 317 (398)
T cd03796 249 QDRVELLGAVPHERVRDVLVQGHI--FLNTSLTEAFCIAIVEAASCGLLVVSTRVGG----IPEVLPP--DMILLAE--- 317 (398)
T ss_pred CCeEEEeCCCCHHHHHHHHHhCCE--EEeCChhhccCHHHHHHHHcCCCEEECCCCC----chhheeC--CceeecC---
Confidence 3567888999864 47767776 653 33443 8999999999999986542 3344443 5443332
Q ss_pred CCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhc
Q 012314 399 GGIITREEIKNKVDQVLGNQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVKTNA 456 (466)
Q Consensus 399 ~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~~ 456 (466)
.+.+++.+++.+++++..-+. .+.+..+..+.+.-+-....+++++.+....
T Consensus 318 ---~~~~~l~~~l~~~l~~~~~~~---~~~~~~~~~~~~~fs~~~~~~~~~~~y~~l~ 369 (398)
T cd03796 318 ---PDVESIVRKLEEAISILRTGK---HDPWSFHNRVKKMYSWEDVAKRTEKVYDRIL 369 (398)
T ss_pred ---CCHHHHHHHHHHHHhChhhhh---hHHHHHHHHHHhhCCHHHHHHHHHHHHHHHh
Confidence 278999999999997643221 2223333333446666777777777766653
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. |
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.3e-07 Score=90.22 Aligned_cols=319 Identities=14% Similarity=0.108 Sum_probs=162.8
Q ss_pred EEEEEcCC--CccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCccHHHHH
Q 012314 5 RVLVMPAP--AQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKLI 82 (466)
Q Consensus 5 ~il~~~~~--~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (466)
||++++.. ..|+...+..++++|.+.||+|++++............ .......... ... .....
T Consensus 1 kIl~~~~~~~~gG~~~~~~~l~~~l~~~g~~v~v~~~~~~~~~~~~~~-------~~~~~~~~~~--~~~-~~~~~---- 66 (353)
T cd03811 1 KILFVIPSLGGGGAERVLLNLANGLDKRGYDVTLVVLRDEGDYLELLP-------SNVKLIPVRV--LKL-KSLRD---- 66 (353)
T ss_pred CeEEEeecccCCCcchhHHHHHHHHHhcCceEEEEEcCCCCccccccc-------cchhhhceee--eec-ccccc----
Confidence 45666644 56888899999999999999999999875443221110 0000000000 000 00000
Q ss_pred HHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCC-ch-hHHHHHHHcCCceEEeccchhHHHHHHhhcccccccCccCCC
Q 012314 83 EKCLQVMPGKLEELIEEINSREDEKIDCFIADGN-IG-WSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSH 160 (466)
Q Consensus 83 ~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~-~~-~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 160 (466)
......+.++++. .++|+|++... .. ....++...++|.+............
T Consensus 67 ----~~~~~~~~~~~~~------~~~dii~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~---------------- 120 (353)
T cd03811 67 ----LLAILRLRRLLRK------EKPDVVISHLTTTPNVLALLAARLGTKLIVWEHNSLSLELK---------------- 120 (353)
T ss_pred ----hhHHHHHHHHHHh------cCCCEEEEcCccchhHHHHHHhhcCCceEEEEcCcchhhhc----------------
Confidence 0011234445554 68999999975 22 33334444478988765433220000
Q ss_pred CCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHHHhhc---CCcceec
Q 012314 161 GTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTF---PELLPIG 237 (466)
Q Consensus 161 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~~~~~---p~v~~VG 237 (466)
... .. . .........++.+++.+...-+.-..... .++..+.
T Consensus 121 ---------------------~~~----------~~-~---~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~~vi~ 165 (353)
T cd03811 121 ---------------------RKL----------RL-L---LLIRKLYRRADKIVAVSEGVKEDLLKLLGIPPDKIEVIY 165 (353)
T ss_pred ---------------------cch----------hH-H---HHHHhhccccceEEEeccchhhhHHHhhcCCccccEEec
Confidence 000 00 0 11112346777888877665543312222 3445554
Q ss_pred cccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhC-----CCCEEEEEcCCCCCC
Q 012314 238 PLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELC-----KRPFLWVVRPDITTD 312 (466)
Q Consensus 238 pl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~-----~~~~i~~~~~~~~~~ 312 (466)
+-....... +....-.. . ....+..+++..|+.. .......+++++..+ +.+++++..+.
T Consensus 166 ~~~~~~~~~-------~~~~~~~~-~-~~~~~~~~i~~~g~~~--~~k~~~~~i~~~~~l~~~~~~~~l~i~G~~~---- 230 (353)
T cd03811 166 NPIDIEEIR-------ALAEEPLE-L-GIPPDGPVILAVGRLS--PQKGFDTLIRAFALLRKEGPDARLVILGDGP---- 230 (353)
T ss_pred CCcChhhcC-------cccchhhh-c-CCCCCceEEEEEecch--hhcChHHHHHHHHHhhhcCCCceEEEEcCCc----
Confidence 322221111 00000000 0 1122347777788753 223344455555433 33444433222
Q ss_pred CCCCCchhHHHHh--cCCceeecccchh-hhhcCCCcccceec----cCCchhhhhhhcCcceeecccccchhhhHHHHH
Q 012314 313 ANDRYPEGFQERV--AARGQMISWAPQL-RVLNHPSIACFLSH----CGWNSTMEGVSNGIPFLCWPYFGDQFLNERYIC 385 (466)
Q Consensus 313 ~~~~~~~~~~~~~--~~n~~~~~~~p~~-~ll~~~~~~~~i~h----gG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~ 385 (466)
..+.+ ....++. .+++.+.++.+.. .++..+++ +|.- |..+++.||+++|+|+|+... ......+.
T Consensus 231 ~~~~~-~~~~~~~~~~~~v~~~g~~~~~~~~~~~~d~--~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~----~~~~e~i~ 303 (353)
T cd03811 231 LREEL-EALAKELGLADRVHFLGFQSNPYPYLKAADL--FVLSSRYEGFPNVLLEAMALGTPVVATDC----PGPREILE 303 (353)
T ss_pred cHHHH-HHHHHhcCCCccEEEecccCCHHHHHHhCCE--EEeCcccCCCCcHHHHHHHhCCCEEEcCC----CChHHHhc
Confidence 00001 1122222 3567777887753 58877777 6532 335688999999999998743 36666777
Q ss_pred HhhhceeEeecCCCCCcCHHHH---HHHHHHHhcCHHHHHHHHH
Q 012314 386 DFWKVGLKFDRDEGGIITREEI---KNKVDQVLGNQDFKARALE 426 (466)
Q Consensus 386 ~~~G~G~~l~~~~~~~~~~~~l---~~~i~~ll~~~~~r~~a~~ 426 (466)
+. +.|...+. -+.+.+ .+++.+++.+++.++++..
T Consensus 304 ~~-~~g~~~~~-----~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 341 (353)
T cd03811 304 DG-ENGLLVPV-----GDEAALAAAALALLDLLLDPELRERLAA 341 (353)
T ss_pred CC-CceEEECC-----CCHHHHHHHHHHHHhccCChHHHHHHHH
Confidence 74 78888853 456666 6777777777765555544
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. |
| >PRK14089 ipid-A-disaccharide synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.01 E-value=3.8e-08 Score=92.58 Aligned_cols=149 Identities=10% Similarity=0.039 Sum_probs=87.8
Q ss_pred CeEEEEEeccccccCHHHHHHHHHHHHhCCCC-EEEEEcCCCCCCCCCCCchhHHHHhcCCceeecccc-hhhhhcCCCc
Q 012314 269 SSVVYVSFGSFTILDQVQFQELALGLELCKRP-FLWVVRPDITTDANDRYPEGFQERVAARGQMISWAP-QLRVLNHPSI 346 (466)
Q Consensus 269 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p-~~~ll~~~~~ 346 (466)
+++|.+--||-...-...+..+.++...+..+ .++.+... ... +.+.+..... ....+++ -.+++..+++
T Consensus 167 ~~~I~llPGSR~~Ei~~llP~~~~aa~~L~~~~~~~~i~~a------~~~-~~i~~~~~~~-~~~~~~~~~~~~m~~aDl 238 (347)
T PRK14089 167 EGTIAFMPGSRKSEIKRLMPIFKELAKKLEGKEKILVVPSF------FKG-KDLKEIYGDI-SEFEISYDTHKALLEAEF 238 (347)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCcEEEEeCC------CcH-HHHHHHHhcC-CCcEEeccHHHHHHhhhH
Confidence 35888888886433234555555665444322 23333222 011 2333322211 1112222 2468877777
Q ss_pred ccceeccCCchhhhhhhcCcceeeccc--ccchhhhHHHHH---HhhhceeEeec---------C-CCCCcCHHHHHHHH
Q 012314 347 ACFLSHCGWNSTMEGVSNGIPFLCWPY--FGDQFLNERYIC---DFWKVGLKFDR---------D-EGGIITREEIKNKV 411 (466)
Q Consensus 347 ~~~i~hgG~~s~~eal~~GvP~l~~P~--~~DQ~~~a~rv~---~~~G~G~~l~~---------~-~~~~~~~~~l~~~i 411 (466)
+|+-.|..|+ |+..+|+|+|+ +. ..=|+.+|+++. . .|+.-.+.. | -.++.|++.|.+.+
T Consensus 239 --al~~SGT~TL-E~al~g~P~Vv-~Yk~~~lty~iak~lv~~~~-igL~Nii~~~~~~~~vvPEllQ~~~t~~~la~~i 313 (347)
T PRK14089 239 --AFICSGTATL-EAALIGTPFVL-AYKAKAIDYFIAKMFVKLKH-IGLANIFFDFLGKEPLHPELLQEFVTVENLLKAY 313 (347)
T ss_pred --HHhcCcHHHH-HHHHhCCCEEE-EEeCCHHHHHHHHHHHcCCe-eehHHHhcCCCcccccCchhhcccCCHHHHHHHH
Confidence 9999999999 99999999987 44 457888999998 5 366655510 0 03678999999999
Q ss_pred HHHhcCHHHHHHHHHHHHHHHHHH
Q 012314 412 DQVLGNQDFKARALELKEKAMSSV 435 (466)
Q Consensus 412 ~~ll~~~~~r~~a~~~~~~~~~~~ 435 (466)
.+ . .+++.++..+.+++.+
T Consensus 314 ~~-~----~~~~~~~~~~~l~~~l 332 (347)
T PRK14089 314 KE-M----DREKFFKKSKELREYL 332 (347)
T ss_pred HH-H----HHHHHHHHHHHHHHHh
Confidence 88 2 3444444445555443
|
|
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.00 E-value=8.3e-07 Score=85.36 Aligned_cols=88 Identities=15% Similarity=0.107 Sum_probs=59.3
Q ss_pred cCCceeecccch-hhhhcCCCccccee--ccC-CchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCCCC
Q 012314 326 AARGQMISWAPQ-LRVLNHPSIACFLS--HCG-WNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGI 401 (466)
Q Consensus 326 ~~n~~~~~~~p~-~~ll~~~~~~~~i~--hgG-~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~ 401 (466)
.+++.+.+|.+. ..++..+++-++-+ +-| .++++||+++|+|+|+.. -......+.+. +.|..++.
T Consensus 245 ~~~v~~~g~~~~~~~~l~~ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~----~~~~~e~i~~~-~~g~~~~~----- 314 (355)
T cd03819 245 QDRVTFVGHCSDMPAAYALADIVVSASTEPEAFGRTAVEAQAMGRPVIASD----HGGARETVRPG-ETGLLVPP----- 314 (355)
T ss_pred cceEEEcCCcccHHHHHHhCCEEEecCCCCCCCchHHHHHHhcCCCEEEcC----CCCcHHHHhCC-CceEEeCC-----
Confidence 357888888554 35887777733323 123 358999999999999874 34455566653 57888843
Q ss_pred cCHHHHHHHHHHHhc-CHHHHHH
Q 012314 402 ITREEIKNKVDQVLG-NQDFKAR 423 (466)
Q Consensus 402 ~~~~~l~~~i~~ll~-~~~~r~~ 423 (466)
-+.+++.++|..++. +++.+++
T Consensus 315 ~~~~~l~~~i~~~~~~~~~~~~~ 337 (355)
T cd03819 315 GDAEALAQALDQILSLLPEGRAK 337 (355)
T ss_pred CCHHHHHHHHHHHHhhCHHHHHH
Confidence 489999999976654 5554443
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. |
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.6e-07 Score=89.63 Aligned_cols=130 Identities=11% Similarity=0.034 Sum_probs=80.3
Q ss_pred EEEEEeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchhHHHH--hcCCceeecccchh---hhhcCCC
Q 012314 271 VVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQER--VAARGQMISWAPQL---RVLNHPS 345 (466)
Q Consensus 271 ~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~--~~~n~~~~~~~p~~---~ll~~~~ 345 (466)
.+.+..|.. .+......+++++++.+.++++...+. ..........+. ..+++.+.+++++. .++..++
T Consensus 172 ~~i~~~Gr~--~~~Kg~~~li~~~~~~~~~l~i~G~~~----~~~~~~~~~~~~~~~~~~v~~~G~~~~~~~~~~~~~~d 245 (335)
T cd03802 172 DYLLFLGRI--SPEKGPHLAIRAARRAGIPLKLAGPVS----DPDYFYREIAPELLDGPDIEYLGEVGGAEKAELLGNAR 245 (335)
T ss_pred CEEEEEEee--ccccCHHHHHHHHHhcCCeEEEEeCCC----CHHHHHHHHHHhcccCCcEEEeCCCCHHHHHHHHHhCc
Confidence 344455665 233445667778888887776655433 111111111212 25788888999875 4677777
Q ss_pred ccccee--ccCC-chhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCH
Q 012314 346 IACFLS--HCGW-NSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQ 418 (466)
Q Consensus 346 ~~~~i~--hgG~-~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~ 418 (466)
+-++-+ +-|. .++.||+++|+|+|+... ......+.+. ..|...+ . .+++.+++.+++..+
T Consensus 246 ~~v~ps~~~E~~~~~~lEAma~G~PvI~~~~----~~~~e~i~~~-~~g~l~~----~---~~~l~~~l~~l~~~~ 309 (335)
T cd03802 246 ALLFPILWEEPFGLVMIEAMACGTPVIAFRR----GAVPEVVEDG-VTGFLVD----S---VEELAAAVARADRLD 309 (335)
T ss_pred EEEeCCcccCCcchHHHHHHhcCCCEEEeCC----CCchhheeCC-CcEEEeC----C---HHHHHHHHHHHhccH
Confidence 733323 2343 578999999999998844 4455555541 3677773 2 999999999987543
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. |
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Probab=98.99 E-value=5.2e-07 Score=86.70 Aligned_cols=86 Identities=15% Similarity=0.200 Sum_probs=62.4
Q ss_pred cCCceeecccchh---hhhcCCCccccee----------ccCCchhhhhhhcCcceeecccccchhhhHHHHHHhhhcee
Q 012314 326 AARGQMISWAPQL---RVLNHPSIACFLS----------HCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGL 392 (466)
Q Consensus 326 ~~n~~~~~~~p~~---~ll~~~~~~~~i~----------hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~ 392 (466)
.+|+.+.+++|+. .++..+++ +|. -|..+++.||+++|+|+|+.+.. .....+.+ -..|.
T Consensus 235 ~~~v~~~g~~~~~~l~~~~~~adi--~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~----~~~~~i~~-~~~g~ 307 (355)
T cd03799 235 EDRVTLLGAKSQEEVRELLRAADL--FVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVS----GIPELVED-GETGL 307 (355)
T ss_pred CCeEEECCcCChHHHHHHHHhCCE--EEecceecCCCCccCccHHHHHHHHcCCCEEecCCC----CcchhhhC-CCceE
Confidence 4788888999854 47777777 555 23357899999999999987543 23345554 24888
Q ss_pred EeecCCCCCcCHHHHHHHHHHHhcCHHHHHH
Q 012314 393 KFDRDEGGIITREEIKNKVDQVLGNQDFKAR 423 (466)
Q Consensus 393 ~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~ 423 (466)
.+.. -+.+++.++|.++++|+..+++
T Consensus 308 ~~~~-----~~~~~l~~~i~~~~~~~~~~~~ 333 (355)
T cd03799 308 LVPP-----GDPEALADAIERLLDDPELRRE 333 (355)
T ss_pred EeCC-----CCHHHHHHHHHHHHhCHHHHHH
Confidence 8842 3799999999999998865443
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. |
| >PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=2.6e-07 Score=89.06 Aligned_cols=132 Identities=18% Similarity=0.160 Sum_probs=80.6
Q ss_pred EEEEEeccccccCHHHHHHHHHHHHhCCCCE-EEEEcCCCCCCCCCCCchhHHHH-----hcCCceeecccch--h---h
Q 012314 271 VVYVSFGSFTILDQVQFQELALGLELCKRPF-LWVVRPDITTDANDRYPEGFQER-----VAARGQMISWAPQ--L---R 339 (466)
Q Consensus 271 ~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~-i~~~~~~~~~~~~~~~~~~~~~~-----~~~n~~~~~~~p~--~---~ 339 (466)
.+++..|.........+..+++++......+ ++.+|.+ ...+.+.+. ..+++.+.+|+++ . +
T Consensus 181 ~~i~~~Grl~~~~~k~~~~l~~a~~~~~~~~~l~ivG~g-------~~~~~l~~~~~~~~l~~~v~f~G~~~~~~~~~~~ 253 (359)
T PRK09922 181 AVFLYVGRLKFEGQKNVKELFDGLSQTTGEWQLHIIGDG-------SDFEKCKAYSRELGIEQRIIWHGWQSQPWEVVQQ 253 (359)
T ss_pred cEEEEEEEEecccCcCHHHHHHHHHhhCCCeEEEEEeCC-------ccHHHHHHHHHHcCCCCeEEEecccCCcHHHHHH
Confidence 5667777653323344666777776554332 3333433 112233222 2467888888754 2 2
Q ss_pred hhcCCCcccceec----cCCchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHh
Q 012314 340 VLNHPSIACFLSH----CGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVL 415 (466)
Q Consensus 340 ll~~~~~~~~i~h----gG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll 415 (466)
.+..+++ +|.. |-..++.||+++|+|+|+.-. ......-+++. ..|..+++ -+.++++++|.+++
T Consensus 254 ~~~~~d~--~v~~s~~Egf~~~~lEAma~G~Pvv~s~~---~~g~~eiv~~~-~~G~lv~~-----~d~~~la~~i~~l~ 322 (359)
T PRK09922 254 KIKNVSA--LLLTSKFEGFPMTLLEAMSYGIPCISSDC---MSGPRDIIKPG-LNGELYTP-----GNIDEFVGKLNKVI 322 (359)
T ss_pred HHhcCcE--EEECCcccCcChHHHHHHHcCCCEEEeCC---CCChHHHccCC-CceEEECC-----CCHHHHHHHHHHHH
Confidence 4434555 6642 335789999999999998741 22333455553 56888743 48999999999999
Q ss_pred cCHHH
Q 012314 416 GNQDF 420 (466)
Q Consensus 416 ~~~~~ 420 (466)
+|++.
T Consensus 323 ~~~~~ 327 (359)
T PRK09922 323 SGEVK 327 (359)
T ss_pred hCccc
Confidence 98864
|
|
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.97 E-value=6.8e-07 Score=86.06 Aligned_cols=88 Identities=11% Similarity=0.023 Sum_probs=61.4
Q ss_pred cCCceeecccch-hhhhcCCCcccceec----cCCchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCCC
Q 012314 326 AARGQMISWAPQ-LRVLNHPSIACFLSH----CGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGG 400 (466)
Q Consensus 326 ~~n~~~~~~~p~-~~ll~~~~~~~~i~h----gG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~ 400 (466)
.+++.+.++..+ .+++..+++ +|.- |-..+++||+++|+|+|+.... .....+.+ +.|....
T Consensus 248 ~~~v~~~g~~~~~~~~~~~adi--~v~ps~~E~~~~~~lEAma~G~PvI~s~~~----~~~~~i~~--~~~~~~~----- 314 (358)
T cd03812 248 EDKVIFLGVRNDVPELLQAMDV--FLFPSLYEGLPLVLIEAQASGLPCILSDTI----TKEVDLTD--LVKFLSL----- 314 (358)
T ss_pred CCcEEEecccCCHHHHHHhcCE--EEecccccCCCHHHHHHHHhCCCEEEEcCC----chhhhhcc--CccEEeC-----
Confidence 367777777544 358877777 5542 4457899999999999987543 34444543 5555553
Q ss_pred CcCHHHHHHHHHHHhcCHHHHHHHHH
Q 012314 401 IITREEIKNKVDQVLGNQDFKARALE 426 (466)
Q Consensus 401 ~~~~~~l~~~i~~ll~~~~~r~~a~~ 426 (466)
.-++++++++|.++++|++.+++...
T Consensus 315 ~~~~~~~a~~i~~l~~~~~~~~~~~~ 340 (358)
T cd03812 315 DESPEIWAEEILKLKSEDRRERSSES 340 (358)
T ss_pred CCCHHHHHHHHHHHHhCcchhhhhhh
Confidence 23589999999999999877765533
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). |
| >PLN02275 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=98.96 E-value=5.5e-07 Score=87.16 Aligned_cols=75 Identities=17% Similarity=0.210 Sum_probs=53.3
Q ss_pred CCceee-cccchhh---hhcCCCccccee-c-----cC-CchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEee
Q 012314 327 ARGQMI-SWAPQLR---VLNHPSIACFLS-H-----CG-WNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFD 395 (466)
Q Consensus 327 ~n~~~~-~~~p~~~---ll~~~~~~~~i~-h-----gG-~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~ 395 (466)
+|+.+. .|+|+.+ +|+.+++ +|. + -| .+++.||+++|+|+|+.. -.....-+++. +.|..++
T Consensus 286 ~~v~~~~~~~~~~~~~~~l~~aDv--~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~----~gg~~eiv~~g-~~G~lv~ 358 (371)
T PLN02275 286 RHVAFRTMWLEAEDYPLLLGSADL--GVSLHTSSSGLDLPMKVVDMFGCGLPVCAVS----YSCIGELVKDG-KNGLLFS 358 (371)
T ss_pred CceEEEcCCCCHHHHHHHHHhCCE--EEEeccccccccccHHHHHHHHCCCCEEEec----CCChHHHccCC-CCeEEEC
Confidence 556655 4788754 5877777 663 1 12 357899999999999974 33466667663 6898873
Q ss_pred cCCCCCcCHHHHHHHHHHHh
Q 012314 396 RDEGGIITREEIKNKVDQVL 415 (466)
Q Consensus 396 ~~~~~~~~~~~l~~~i~~ll 415 (466)
++++|+++|.++|
T Consensus 359 -------~~~~la~~i~~l~ 371 (371)
T PLN02275 359 -------SSSELADQLLELL 371 (371)
T ss_pred -------CHHHHHHHHHHhC
Confidence 4899999998875
|
|
| >PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=98.96 E-value=4.2e-07 Score=89.83 Aligned_cols=219 Identities=12% Similarity=0.066 Sum_probs=120.0
Q ss_pred cccEEEEcChhhccHHHHhhcCCcceec-cccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHH
Q 012314 210 AVNFHFCNSTYELESEAFTTFPELLPIG-PLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQ 288 (466)
Q Consensus 210 ~~~~vl~~s~~~le~~~~~~~p~v~~VG-pl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~ 288 (466)
..|.+++--++|-+.. ....-++.||| |+...-... +..++..+-+.-.+++++|-+--||-.+.=...+.
T Consensus 361 ~vD~ll~IfPFE~~~y-~~~gv~v~yVGHPL~d~i~~~-------~~~~~~r~~lgl~~~~~iIaLLPGSR~~EI~rllP 432 (608)
T PRK01021 361 YLDLLLLILPFEQNLF-KDSPLRTVYLGHPLVETISSF-------SPNLSWKEQLHLPSDKPIVAAFPGSRRGDILRNLT 432 (608)
T ss_pred HhhhheecCccCHHHH-HhcCCCeEEECCcHHhhcccC-------CCHHHHHHHcCCCCCCCEEEEECCCCHHHHHHHHH
Confidence 4556666666665555 44566899999 776653211 11222223333334567999999986433334566
Q ss_pred HHHHHHH--hCC--CCEEEEEcCCCCCCCCCCCchhHHHHhc-CC---ceeecccchhhhhcCCCcccceeccCCchhhh
Q 012314 289 ELALGLE--LCK--RPFLWVVRPDITTDANDRYPEGFQERVA-AR---GQMISWAPQLRVLNHPSIACFLSHCGWNSTME 360 (466)
Q Consensus 289 ~~~~a~~--~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~n---~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~e 360 (466)
.++++.+ ... .++++...+. ...+.+.+... .+ +.++.--...+++..+++ .+.-.|. .++|
T Consensus 433 v~l~aa~~~~l~~~l~fvvp~a~~-------~~~~~i~~~~~~~~~~~~~ii~~~~~~~~m~aaD~--aLaaSGT-aTLE 502 (608)
T PRK01021 433 IQVQAFLASSLASTHQLLVSSANP-------KYDHLILEVLQQEGCLHSHIVPSQFRYELMRECDC--ALAKCGT-IVLE 502 (608)
T ss_pred HHHHHHHHHHhccCeEEEEecCch-------hhHHHHHHHHhhcCCCCeEEecCcchHHHHHhcCe--eeecCCH-HHHH
Confidence 6777766 443 3444433222 11122232221 11 122210012468877776 6666554 5689
Q ss_pred hhhcCcceeecc-cccchhhhHHHHHHh---------hhceeEeecCC---CCCcCHHHHHHHHHHHhcCHHHHHHHHHH
Q 012314 361 GVSNGIPFLCWP-YFGDQFLNERYICDF---------WKVGLKFDRDE---GGIITREEIKNKVDQVLGNQDFKARALEL 427 (466)
Q Consensus 361 al~~GvP~l~~P-~~~DQ~~~a~rv~~~---------~G~G~~l~~~~---~~~~~~~~l~~~i~~ll~~~~~r~~a~~~ 427 (466)
+..+|+||+++= ...=-...++++.+. +=+|..+-||= .++.|++.|++++ ++|.|+++|++.++=
T Consensus 503 aAL~g~PmVV~YK~s~Lty~Iak~Lvki~i~yIsLpNIIagr~VvPEllqgQ~~~tpe~La~~l-~lL~d~~~r~~~~~~ 581 (608)
T PRK01021 503 TALNQTPTIVTCQLRPFDTFLAKYIFKIILPAYSLPNIILGSTIFPEFIGGKKDFQPEEVAAAL-DILKTSQSKEKQKDA 581 (608)
T ss_pred HHHhCCCEEEEEecCHHHHHHHHHHHhccCCeeehhHHhcCCCcchhhcCCcccCCHHHHHHHH-HHhcCHHHHHHHHHH
Confidence 999999998752 222233345555430 01122222211 2578999999997 888888777777666
Q ss_pred HHHHHHHHhcCCCcHHHHHH
Q 012314 428 KEKAMSSVREGGSSYKTFQN 447 (466)
Q Consensus 428 ~~~~~~~~~~~g~~~~~~~~ 447 (466)
-+++++.+++|.++.+.+-.
T Consensus 582 l~~lr~~Lg~~~~~~~~~~~ 601 (608)
T PRK01021 582 CRDLYQAMNESASTMKECLS 601 (608)
T ss_pred HHHHHHHhcCCCCCHHHHHH
Confidence 66666666556665544433
|
|
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.96 E-value=3.5e-06 Score=80.79 Aligned_cols=82 Identities=16% Similarity=0.235 Sum_probs=56.7
Q ss_pred CCceeecccch-hhhhcCCCcccceeccC----CchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCCCC
Q 012314 327 ARGQMISWAPQ-LRVLNHPSIACFLSHCG----WNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGI 401 (466)
Q Consensus 327 ~n~~~~~~~p~-~~ll~~~~~~~~i~hgG----~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~ 401 (466)
.++.+.+..+. ..++..+++ +|..+. .+++.||+++|+|+|+. |...+...+.+ .|..++.
T Consensus 251 ~~v~~~g~~~~~~~~~~~adi--~v~ps~~e~~~~~~~Ea~a~g~PvI~~----~~~~~~e~~~~---~g~~~~~----- 316 (365)
T cd03807 251 DKVILLGERSDVPALLNALDV--FVLSSLSEGFPNVLLEAMACGLPVVAT----DVGDNAELVGD---TGFLVPP----- 316 (365)
T ss_pred ceEEEccccccHHHHHHhCCE--EEeCCccccCCcHHHHHHhcCCCEEEc----CCCChHHHhhc---CCEEeCC-----
Confidence 45655555443 458877777 775433 47899999999999986 44445555543 4566642
Q ss_pred cCHHHHHHHHHHHhcCHHHHH
Q 012314 402 ITREEIKNKVDQVLGNQDFKA 422 (466)
Q Consensus 402 ~~~~~l~~~i~~ll~~~~~r~ 422 (466)
-+.+++.++|.+++++++.++
T Consensus 317 ~~~~~l~~~i~~l~~~~~~~~ 337 (365)
T cd03807 317 GDPEALAEAIEALLADPALRQ 337 (365)
T ss_pred CCHHHHHHHHHHHHhChHHHH
Confidence 368999999999998874443
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. |
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.93 E-value=7.7e-07 Score=85.74 Aligned_cols=87 Identities=13% Similarity=0.161 Sum_probs=61.4
Q ss_pred cCCceee-cccchh---hhhcCCCccccee--c----cCCchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEee
Q 012314 326 AARGQMI-SWAPQL---RVLNHPSIACFLS--H----CGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFD 395 (466)
Q Consensus 326 ~~n~~~~-~~~p~~---~ll~~~~~~~~i~--h----gG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~ 395 (466)
.+++.+. .|+|+. .++..+++ +|. . |..+++.||+++|+|+|+.+..+ ...+.+. +.|..+.
T Consensus 246 ~~~v~~~~~~~~~~~~~~~~~~ad~--~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-----~~~i~~~-~~g~~~~ 317 (366)
T cd03822 246 ADRVIFINRYLPDEELPELFSAADV--VVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-----AEEVLDG-GTGLLVP 317 (366)
T ss_pred CCcEEEecCcCCHHHHHHHHhhcCE--EEecccccccccchHHHHHHHcCCCEEecCCCC-----hheeeeC-CCcEEEc
Confidence 4677777 458864 57766776 653 2 33568899999999999987654 2334453 7788875
Q ss_pred cCCCCCcCHHHHHHHHHHHhcCHHHHHHHH
Q 012314 396 RDEGGIITREEIKNKVDQVLGNQDFKARAL 425 (466)
Q Consensus 396 ~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~ 425 (466)
. -+.+++.+++.++++|++.+++..
T Consensus 318 ~-----~d~~~~~~~l~~l~~~~~~~~~~~ 342 (366)
T cd03822 318 P-----GDPAALAEAIRRLLADPELAQALR 342 (366)
T ss_pred C-----CCHHHHHHHHHHHHcChHHHHHHH
Confidence 3 368999999999999876555433
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. |
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.93 E-value=8.2e-07 Score=85.65 Aligned_cols=153 Identities=16% Similarity=0.210 Sum_probs=83.0
Q ss_pred EEEeccccccCHHHHHHHHHHHHhCC--CCEEEEEcCCCCCCCCCCCchhHHH--HhcCCceeecccchhh---hhcCCC
Q 012314 273 YVSFGSFTILDQVQFQELALGLELCK--RPFLWVVRPDITTDANDRYPEGFQE--RVAARGQMISWAPQLR---VLNHPS 345 (466)
Q Consensus 273 ~vs~Gs~~~~~~~~~~~~~~a~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~--~~~~n~~~~~~~p~~~---ll~~~~ 345 (466)
++..|+.. +...+..++++++.+. .+++++..+.. .....+.+.+ ...+++.+.+++|+.+ ++..++
T Consensus 196 i~~~G~~~--~~Kg~~~li~a~~~l~~~~~l~ivG~~~~----~~~~~~~~~~~~~~~~~V~~~g~~~~~~~~~~~~~ad 269 (363)
T cd04955 196 YLLVGRIV--PENNIDDLIEAFSKSNSGKKLVIVGNADH----NTPYGKLLKEKAAADPRIIFVGPIYDQELLELLRYAA 269 (363)
T ss_pred EEEEeccc--ccCCHHHHHHHHHhhccCceEEEEcCCCC----cchHHHHHHHHhCCCCcEEEccccChHHHHHHHHhCC
Confidence 44567653 3344556677776554 44444433221 1111122221 2247888889999864 565555
Q ss_pred cccceecc----CC-chhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCHHH
Q 012314 346 IACFLSHC----GW-NSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDF 420 (466)
Q Consensus 346 ~~~~i~hg----G~-~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~ 420 (466)
+ ++.+. |. +++.||+++|+|+|+..... +...+. ..|..... .+.++++|.++++|++.
T Consensus 270 ~--~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~----~~e~~~---~~g~~~~~-------~~~l~~~i~~l~~~~~~ 333 (363)
T cd04955 270 L--FYLHGHSVGGTNPSLLEAMAYGCPVLASDNPF----NREVLG---DKAIYFKV-------GDDLASLLEELEADPEE 333 (363)
T ss_pred E--EEeCCccCCCCChHHHHHHHcCCCEEEecCCc----cceeec---CCeeEecC-------chHHHHHHHHHHhCHHH
Confidence 5 55433 32 47899999999999886542 222222 23444432 12299999999998755
Q ss_pred HHHHHHHHHHHHHHHhcCCCcHHHHHHHHH
Q 012314 421 KARALELKEKAMSSVREGGSSYKTFQNFLQ 450 (466)
Q Consensus 421 r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~ 450 (466)
+++. ++..++.+.+.-+-....+++++
T Consensus 334 ~~~~---~~~~~~~~~~~fs~~~~~~~~~~ 360 (363)
T cd04955 334 VSAM---AKAARERIREKYTWEKIADQYEE 360 (363)
T ss_pred HHHH---HHHHHHHHHHhCCHHHHHHHHHH
Confidence 5443 33333322223444555555544
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >TIGR02470 sucr_synth sucrose synthase | Back alignment and domain information |
|---|
Probab=98.92 E-value=5.1e-06 Score=85.60 Aligned_cols=90 Identities=13% Similarity=0.126 Sum_probs=58.2
Q ss_pred CCceeeccc-ch---hhhhcC-CC-ccccee---ccCC-chhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeec
Q 012314 327 ARGQMISWA-PQ---LRVLNH-PS-IACFLS---HCGW-NSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDR 396 (466)
Q Consensus 327 ~n~~~~~~~-p~---~~ll~~-~~-~~~~i~---hgG~-~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~ 396 (466)
+++.+.++. +. .+++.+ ++ .++||. .-|. -+++||+++|+|+|+. +.......|.+. .-|..+++
T Consensus 619 g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT----~~GG~~EiV~dg-~tGfLVdp 693 (784)
T TIGR02470 619 GQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFAT----RFGGPLEIIQDG-VSGFHIDP 693 (784)
T ss_pred CeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCCEEEc----CCCCHHHHhcCC-CcEEEeCC
Confidence 566666654 32 234432 22 233664 2333 4789999999999997 444566677663 67888864
Q ss_pred CCCCCcCHHHHHHHHHHHh----cCHHHHHHHHH
Q 012314 397 DEGGIITREEIKNKVDQVL----GNQDFKARALE 426 (466)
Q Consensus 397 ~~~~~~~~~~l~~~i~~ll----~~~~~r~~a~~ 426 (466)
-++++++++|.+++ .|++.+++..+
T Consensus 694 -----~D~eaLA~aL~~ll~kll~dp~~~~~ms~ 722 (784)
T TIGR02470 694 -----YHGEEAAEKIVDFFEKCDEDPSYWQKISQ 722 (784)
T ss_pred -----CCHHHHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 47889999998875 57766665433
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria. |
| >PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length | Back alignment and domain information |
|---|
Probab=98.92 E-value=1.9e-06 Score=80.45 Aligned_cols=299 Identities=18% Similarity=0.155 Sum_probs=155.5
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcch--HHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCccHHHHH
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNH--KRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKLI 82 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (466)
||.+-- ...-|+.-+..+.++|.++||+|.+.+-.... +.+.. -++.+..+..-- .+....+
T Consensus 2 kIwiDi-~~p~hvhfFk~~I~eL~~~GheV~it~R~~~~~~~LL~~---------yg~~y~~iG~~g------~~~~~Kl 65 (335)
T PF04007_consen 2 KIWIDI-THPAHVHFFKNIIRELEKRGHEVLITARDKDETEELLDL---------YGIDYIVIGKHG------DSLYGKL 65 (335)
T ss_pred eEEEEC-CCchHHHHHHHHHHHHHhCCCEEEEEEeccchHHHHHHH---------cCCCeEEEcCCC------CCHHHHH
Confidence 444433 22349999999999999999999999986532 22332 367777765311 1122212
Q ss_pred HHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEEeccchhHHHHHHhhcccccccCccCCCCC
Q 012314 83 EKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSHGT 162 (466)
Q Consensus 83 ~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 162 (466)
.... ....++++.+++ .+||++|+- .++.+..+|..+|+|+|.+.=..........
T Consensus 66 ~~~~----~R~~~l~~~~~~---~~pDv~is~-~s~~a~~va~~lgiP~I~f~D~e~a~~~~~L---------------- 121 (335)
T PF04007_consen 66 LESI----ERQYKLLKLIKK---FKPDVAISF-GSPEAARVAFGLGIPSIVFNDTEHAIAQNRL---------------- 121 (335)
T ss_pred HHHH----HHHHHHHHHHHh---hCCCEEEec-CcHHHHHHHHHhCCCeEEEecCchhhcccee----------------
Confidence 2221 223344444444 789999975 4678889999999999997643221100000
Q ss_pred CCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEE-EcChhhccHHHHhhcCCcceeccccC
Q 012314 163 PMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHF-CNSTYELESEAFTTFPELLPIGPLLA 241 (466)
Q Consensus 163 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl-~~s~~~le~~~~~~~p~v~~VGpl~~ 241 (466)
.+| +.+ ..+............+ -.+ +.+. +++..++-. +-|+-+
T Consensus 122 --------t~P------la~---~i~~P~~~~~~~~~~~------G~~-~~i~~y~G~~E~ay-----------l~~F~P 166 (335)
T PF04007_consen 122 --------TLP------LAD---VIITPEAIPKEFLKRF------GAK-NQIRTYNGYKELAY-----------LHPFKP 166 (335)
T ss_pred --------ehh------cCC---eeECCcccCHHHHHhc------CCc-CCEEEECCeeeEEe-----------ecCCCC
Confidence 000 000 0000000000000000 011 1232 444333321 111111
Q ss_pred CCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccc----cCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCC
Q 012314 242 SNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTI----LDQVQFQELALGLELCKRPFLWVVRPDITTDANDRY 317 (466)
Q Consensus 242 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~----~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~ 317 (466)
+.+..+-+.. ++.+.|++=+.+... -....+..+++.+++.+..++..-... ..
T Consensus 167 --------------d~~vl~~lg~-~~~~yIvvR~~~~~A~y~~~~~~i~~~ii~~L~~~~~~vV~ipr~~-------~~ 224 (335)
T PF04007_consen 167 --------------DPEVLKELGL-DDEPYIVVRPEAWKASYDNGKKSILPEIIEELEKYGRNVVIIPRYE-------DQ 224 (335)
T ss_pred --------------ChhHHHHcCC-CCCCEEEEEeccccCeeecCccchHHHHHHHHHhhCceEEEecCCc-------ch
Confidence 1111222221 234577777765311 123456778888888887744333222 12
Q ss_pred chhHHHHhcCCceee-cccchhhhhcCCCcccceeccCCchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeec
Q 012314 318 PEGFQERVAARGQMI-SWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDR 396 (466)
Q Consensus 318 ~~~~~~~~~~n~~~~-~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~ 396 (466)
++.+. +. ++.+. .-++...||.++++ +|+-|| +...||...|+|.|.+ +.++-...-+.+.+. |+ ..
T Consensus 225 ~~~~~-~~--~~~i~~~~vd~~~Ll~~a~l--~Ig~gg-TMa~EAA~LGtPaIs~-~~g~~~~vd~~L~~~-Gl--l~-- 292 (335)
T PF04007_consen 225 RELFE-KY--GVIIPPEPVDGLDLLYYADL--VIGGGG-TMAREAALLGTPAISC-FPGKLLAVDKYLIEK-GL--LY-- 292 (335)
T ss_pred hhHHh-cc--CccccCCCCCHHHHHHhcCE--EEeCCc-HHHHHHHHhCCCEEEe-cCCcchhHHHHHHHC-CC--eE--
Confidence 22221 11 23333 55555689988887 998777 6789999999999985 223333344556563 65 33
Q ss_pred CCCCCcCHHHHHHHHHHHh
Q 012314 397 DEGGIITREEIKNKVDQVL 415 (466)
Q Consensus 397 ~~~~~~~~~~l~~~i~~ll 415 (466)
..-+.+++.+.|.+.+
T Consensus 293 ---~~~~~~ei~~~v~~~~ 308 (335)
T PF04007_consen 293 ---HSTDPDEIVEYVRKNL 308 (335)
T ss_pred ---ecCCHHHHHHHHHHhh
Confidence 3456777777665544
|
They are found in archaea and some bacteria and have no known function. |
| >PLN02846 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=98.91 E-value=1.1e-06 Score=85.82 Aligned_cols=122 Identities=11% Similarity=0.075 Sum_probs=71.3
Q ss_pred EEEEeccccccCHHHHHHHHHHHHhC-----CCCEEEEEcCCCCCCCCCCCchhHHHHhcC---Cce-eecccchhhhhc
Q 012314 272 VYVSFGSFTILDQVQFQELALGLELC-----KRPFLWVVRPDITTDANDRYPEGFQERVAA---RGQ-MISWAPQLRVLN 342 (466)
Q Consensus 272 v~vs~Gs~~~~~~~~~~~~~~a~~~~-----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~---n~~-~~~~~p~~~ll~ 342 (466)
+++..|... ....+..+++++..+ +.+ ++++|++ +..+.+++...+ +.. +.++.+..+++.
T Consensus 230 ~~l~vGRL~--~eK~~~~Li~a~~~l~~~~~~~~-l~ivGdG-------p~~~~L~~~a~~l~l~~~vf~G~~~~~~~~~ 299 (462)
T PLN02846 230 GAYYIGKMV--WSKGYKELLKLLHKHQKELSGLE-VDLYGSG-------EDSDEVKAAAEKLELDVRVYPGRDHADPLFH 299 (462)
T ss_pred EEEEEecCc--ccCCHHHHHHHHHHHHhhCCCeE-EEEECCC-------ccHHHHHHHHHhcCCcEEEECCCCCHHHHHH
Confidence 444556542 233455556665432 223 4455544 233344433322 222 346666667887
Q ss_pred CCCcccceecc----CCchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCH
Q 012314 343 HPSIACFLSHC----GWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQ 418 (466)
Q Consensus 343 ~~~~~~~i~hg----G~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~ 418 (466)
..++ ||.-+ -..++.||+++|+|+|+.-.. .+ .-+.+. +-|.... +.+++.+++.++|.++
T Consensus 300 ~~Dv--Fv~pS~~Et~g~v~lEAmA~G~PVVa~~~~----~~-~~v~~~-~ng~~~~-------~~~~~a~ai~~~l~~~ 364 (462)
T PLN02846 300 DYKV--FLNPSTTDVVCTTTAEALAMGKIVVCANHP----SN-EFFKQF-PNCRTYD-------DGKGFVRATLKALAEE 364 (462)
T ss_pred hCCE--EEECCCcccchHHHHHHHHcCCcEEEecCC----Cc-ceeecC-CceEecC-------CHHHHHHHHHHHHccC
Confidence 7766 88763 346889999999999998433 22 334442 4554442 6889999999999754
|
|
| >COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.89 E-value=8e-06 Score=76.56 Aligned_cols=315 Identities=12% Similarity=0.111 Sum_probs=184.0
Q ss_pred CCccCHHHHHHHHHHHHhC--CCEEEEEe-CCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCccHHHHHHHHHHh
Q 012314 12 PAQGHVIPLLEFSQCLAKH--GFRVTFVN-TDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKLIEKCLQV 88 (466)
Q Consensus 12 ~~~GH~~p~l~la~~L~~r--Gh~Vt~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (466)
.+.|-++...+|.++|.++ +..|++-+ ++-..+.+.+.. +..+...-+|-+
T Consensus 57 aSVGEv~a~~pLv~~l~~~~P~~~ilvTt~T~Tg~e~a~~~~------~~~v~h~YlP~D-------------------- 110 (419)
T COG1519 57 ASVGEVLAALPLVRALRERFPDLRILVTTMTPTGAERAAALF------GDSVIHQYLPLD-------------------- 110 (419)
T ss_pred cchhHHHHHHHHHHHHHHhCCCCCEEEEecCccHHHHHHHHc------CCCeEEEecCcC--------------------
Confidence 4669999999999999998 88888888 444444444432 122344444421
Q ss_pred ccHHHHHHHHHHhcCCCCCccEEEeCCCch--hHHHHHHHcCCceEEeccchhHHHHHHhhcccccccCccCCCCCCCcc
Q 012314 89 MPGKLEELIEEINSREDEKIDCFIADGNIG--WSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSHGTPMSM 166 (466)
Q Consensus 89 ~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 166 (466)
....++++++. .+||++|.-.... ....-+++.|+|.+.+..=-.
T Consensus 111 ~~~~v~rFl~~------~~P~l~Ii~EtElWPnli~e~~~~~~p~~LvNaRLS--------------------------- 157 (419)
T COG1519 111 LPIAVRRFLRK------WRPKLLIIMETELWPNLINELKRRGIPLVLVNARLS--------------------------- 157 (419)
T ss_pred chHHHHHHHHh------cCCCEEEEEeccccHHHHHHHHHcCCCEEEEeeeec---------------------------
Confidence 23346777777 8899988665444 566677889999998641000
Q ss_pred ccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhh-hccccEEEEcChhhccHHHHhhcCCcceeccccCCCCC
Q 012314 167 QMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRA-MIAVNFHFCNSTYELESEAFTTFPELLPIGPLLASNRL 245 (466)
Q Consensus 167 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~vl~~s~~~le~~~~~~~p~v~~VGpl~~~~~~ 245 (466)
.+. ...+..+....+. +...+++++.|...-+.-..--.+++...|-+-.+...
T Consensus 158 -----------------------~rS--~~~y~k~~~~~~~~~~~i~li~aQse~D~~Rf~~LGa~~v~v~GNlKfd~~~ 212 (419)
T COG1519 158 -----------------------DRS--FARYAKLKFLARLLFKNIDLILAQSEEDAQRFRSLGAKPVVVTGNLKFDIEP 212 (419)
T ss_pred -----------------------hhh--hHHHHHHHHHHHHHHHhcceeeecCHHHHHHHHhcCCcceEEecceeecCCC
Confidence 000 0011222222222 36778888888665443311123457777766655432
Q ss_pred CCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHH-hCC-CCEEEEEcCCCCCCCCCCCchhHHH
Q 012314 246 GNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLE-LCK-RPFLWVVRPDITTDANDRYPEGFQE 323 (466)
Q Consensus 246 ~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~-~~~-~~~i~~~~~~~~~~~~~~~~~~~~~ 323 (466)
. ...+..+..|-..-+....+.|..+|+.. ..+.+-....++. +.+ ..+||+=... +.. +.+.+
T Consensus 213 ~------~~~~~~~~~~r~~l~~~r~v~iaaSTH~G-Eeei~l~~~~~l~~~~~~~llIlVPRHp------ERf-~~v~~ 278 (419)
T COG1519 213 P------PQLAAELAALRRQLGGHRPVWVAASTHEG-EEEIILDAHQALKKQFPNLLLILVPRHP------ERF-KAVEN 278 (419)
T ss_pred C------hhhHHHHHHHHHhcCCCCceEEEecCCCc-hHHHHHHHHHHHHhhCCCceEEEecCCh------hhH-HHHHH
Confidence 2 11111222222221211367776777533 3444444444443 332 3344443222 111 11111
Q ss_pred Hh------------------cCCceeecccchh-hhhcCCCc----ccceeccCCchhhhhhhcCcceeecccccchhhh
Q 012314 324 RV------------------AARGQMISWAPQL-RVLNHPSI----ACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLN 380 (466)
Q Consensus 324 ~~------------------~~n~~~~~~~p~~-~ll~~~~~----~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~~ 380 (466)
.. ..++.+.|-+--+ .+++-+++ +-++.+||.| ..|++++|+|+|.=|+..-|.+.
T Consensus 279 l~~~~gl~~~~rS~~~~~~~~tdV~l~DtmGEL~l~y~~adiAFVGGSlv~~GGHN-~LEpa~~~~pvi~Gp~~~Nf~ei 357 (419)
T COG1519 279 LLKRKGLSVTRRSQGDPPFSDTDVLLGDTMGELGLLYGIADIAFVGGSLVPIGGHN-PLEPAAFGTPVIFGPYTFNFSDI 357 (419)
T ss_pred HHHHcCCeEEeecCCCCCCCCCcEEEEecHhHHHHHHhhccEEEECCcccCCCCCC-hhhHHHcCCCEEeCCccccHHHH
Confidence 11 1244455555433 24444444 2356699997 68999999999999999999999
Q ss_pred HHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 012314 381 ERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALELKEKAMS 433 (466)
Q Consensus 381 a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~~ 433 (466)
++++.++ |.|+.++ +.+.|.+++..+++|++.|++..+-...+..
T Consensus 358 ~~~l~~~-ga~~~v~-------~~~~l~~~v~~l~~~~~~r~~~~~~~~~~v~ 402 (419)
T COG1519 358 AERLLQA-GAGLQVE-------DADLLAKAVELLLADEDKREAYGRAGLEFLA 402 (419)
T ss_pred HHHHHhc-CCeEEEC-------CHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 9999996 9999994 3888999999999888777766554444443
|
|
| >cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Probab=98.88 E-value=1.5e-06 Score=83.69 Aligned_cols=140 Identities=14% Similarity=0.180 Sum_probs=82.4
Q ss_pred CeEEEEEeccccccCHHHHHHHHHHHHhC-----CCCEEEEEcCCCCCCCCCCCchhHHH---H--hcCCceeecccch-
Q 012314 269 SSVVYVSFGSFTILDQVQFQELALGLELC-----KRPFLWVVRPDITTDANDRYPEGFQE---R--VAARGQMISWAPQ- 337 (466)
Q Consensus 269 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~-----~~~~i~~~~~~~~~~~~~~~~~~~~~---~--~~~n~~~~~~~p~- 337 (466)
+..+++..|+.. +.+....+++++... +.+++++..+. ..+.+.+ . ..+|+.+.++..+
T Consensus 187 ~~~~~l~~g~~~--~~kg~~~li~a~~~l~~~~~~~~l~i~G~g~--------~~~~~~~~~~~~~~~~~v~~~g~~~~~ 256 (360)
T cd04951 187 DTFVILAVGRLV--EAKDYPNLLKAFAKLLSDYLDIKLLIAGDGP--------LRATLERLIKALGLSNRVKLLGLRDDI 256 (360)
T ss_pred CCEEEEEEeeCc--hhcCcHHHHHHHHHHHhhCCCeEEEEEcCCC--------cHHHHHHHHHhcCCCCcEEEecccccH
Confidence 346777778652 233334444444322 34555543322 1122222 1 2356777787765
Q ss_pred hhhhcCCCcccceecc----CCchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHH
Q 012314 338 LRVLNHPSIACFLSHC----GWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQ 413 (466)
Q Consensus 338 ~~ll~~~~~~~~i~hg----G~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ 413 (466)
..++..+++ +|.-. ..+++.||+++|+|+|+. |.......+++ .|..+. .-+.+++++++.+
T Consensus 257 ~~~~~~ad~--~v~~s~~e~~~~~~~Ea~a~G~PvI~~----~~~~~~e~i~~---~g~~~~-----~~~~~~~~~~i~~ 322 (360)
T cd04951 257 AAYYNAADL--FVLSSAWEGFGLVVAEAMACELPVVAT----DAGGVREVVGD---SGLIVP-----ISDPEALANKIDE 322 (360)
T ss_pred HHHHHhhce--EEecccccCCChHHHHHHHcCCCEEEe----cCCChhhEecC---CceEeC-----CCCHHHHHHHHHH
Confidence 458877777 55432 256889999999999975 55556666654 344443 2478999999999
Q ss_pred Hh-cCHHHHHHHHHHHHHHH
Q 012314 414 VL-GNQDFKARALELKEKAM 432 (466)
Q Consensus 414 ll-~~~~~r~~a~~~~~~~~ 432 (466)
++ .++.+++....-++.+.
T Consensus 323 ll~~~~~~~~~~~~~~~~~~ 342 (360)
T cd04951 323 ILKMSGEERDIIGARRERIV 342 (360)
T ss_pred HHhCCHHHHHHHHHHHHHHH
Confidence 98 45566655544433333
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have |
| >PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.87 E-value=5.3e-07 Score=85.36 Aligned_cols=340 Identities=15% Similarity=0.110 Sum_probs=176.6
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCccHHHHHHHH
Q 012314 6 VLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKLIEKC 85 (466)
Q Consensus 6 il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (466)
|++++.-..|+.+ ...|.++|.+++=++.|.+-... ..++. |++...--+.+ ....+.+.+..+
T Consensus 1 I~i~AGE~SGD~~-ga~Li~~Lk~~~p~~~~~GvGG~--~M~~~---------G~~~l~d~~~l----svmG~~Evl~~l 64 (373)
T PF02684_consen 1 IFISAGEASGDLH-GARLIRALKARDPDIEFYGVGGP--RMQAA---------GVESLFDMEEL----SVMGFVEVLKKL 64 (373)
T ss_pred CEEEeeCccHHHH-HHHHHHHHHhhCCCcEEEEEech--HHHhC---------CCceecchHHh----hhccHHHHHHHH
Confidence 3455555567777 56788999888766666655432 23332 33332111000 112222222222
Q ss_pred HHhccHHHHHHHHHHhcCCCCCccEEE-eCC--CchhHHHHHHHcCCc--eEEeccchhHHHHHHhhcccccccCccCCC
Q 012314 86 LQVMPGKLEELIEEINSREDEKIDCFI-ADG--NIGWSMEIAKKMNVR--GAVFWPSSAASVALVFRIPKLIDDGIIDSH 160 (466)
Q Consensus 86 ~~~~~~~~~~ll~~l~~~~~~~~DlvV-~D~--~~~~~~~~A~~lgiP--~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 160 (466)
.......+++.+.+.. .+||++| +|+ |.......+++.|+| ++.|.+
T Consensus 65 -~~~~~~~~~~~~~~~~---~~pd~vIlID~pgFNlrlak~lk~~~~~~~viyYI~------------------------ 116 (373)
T PF02684_consen 65 -PKLKRLFRKLVERIKE---EKPDVVILIDYPGFNLRLAKKLKKRGIPIKVIYYIS------------------------ 116 (373)
T ss_pred -HHHHHHHHHHHHHHHH---cCCCEEEEeCCCCccHHHHHHHHHhCCCceEEEEEC------------------------
Confidence 1223344555555555 7899988 565 233455566678888 555431
Q ss_pred CCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHHHhhcCCcceec-cc
Q 012314 161 GTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTFPELLPIG-PL 239 (466)
Q Consensus 161 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~~~~~p~v~~VG-pl 239 (466)
|.++.++ +.+..... ...|.+++-.+++-++. ....-++.||| |+
T Consensus 117 ------------PqvWAWr-----------~~R~~~i~----------~~~D~ll~ifPFE~~~y-~~~g~~~~~VGHPl 162 (373)
T PF02684_consen 117 ------------PQVWAWR-----------PGRAKKIK----------KYVDHLLVIFPFEPEFY-KKHGVPVTYVGHPL 162 (373)
T ss_pred ------------CceeeeC-----------ccHHHHHH----------HHHhheeECCcccHHHH-hccCCCeEEECCcc
Confidence 1111111 11111111 34566666666655554 44456789999 77
Q ss_pred cCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHH---hC--CCCEEEEEcCCCCCCCC
Q 012314 240 LASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLE---LC--KRPFLWVVRPDITTDAN 314 (466)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~---~~--~~~~i~~~~~~~~~~~~ 314 (466)
...-... ..+....+.+ -.+++++|.+--||-.+-=...+..++++.+ +. +.++++.....
T Consensus 163 ~d~~~~~-------~~~~~~~~~~-l~~~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~~~p~l~fvvp~a~~------ 228 (373)
T PF02684_consen 163 LDEVKPE-------PDRAEAREKL-LDPDKPIIALLPGSRKSEIKRLLPIFLEAAKLLKKQRPDLQFVVPVAPE------ 228 (373)
T ss_pred hhhhccC-------CCHHHHHHhc-CCCCCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCCH------
Confidence 7654332 1112222222 2244679999999863322233445555542 22 34455444322
Q ss_pred CCCchhHHH---HhcCCceeeccc-chhhhhcCCCcccceeccCCchhhhhhhcCcceeecc-cccchhhhHHHHHHhhh
Q 012314 315 DRYPEGFQE---RVAARGQMISWA-PQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWP-YFGDQFLNERYICDFWK 389 (466)
Q Consensus 315 ~~~~~~~~~---~~~~n~~~~~~~-p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P-~~~DQ~~~a~rv~~~~G 389 (466)
...+.+.+ ....++.+.-.. .-.+++..+++ .+.-.| +.++|+..+|+|+|++= ...=....|+++.+ ..
T Consensus 229 -~~~~~i~~~~~~~~~~~~~~~~~~~~~~~m~~ad~--al~~SG-TaTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk-~~ 303 (373)
T PF02684_consen 229 -VHEELIEEILAEYPPDVSIVIIEGESYDAMAAADA--ALAASG-TATLEAALLGVPMVVAYKVSPLTYFIAKRLVK-VK 303 (373)
T ss_pred -HHHHHHHHHHHhhCCCCeEEEcCCchHHHHHhCcc--hhhcCC-HHHHHHHHhCCCEEEEEcCcHHHHHHHHHhhc-CC
Confidence 11111111 122333332211 23457777776 444444 46799999999998762 22233345555533 12
Q ss_pred c--------eeEeecCC-CCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCCcH
Q 012314 390 V--------GLKFDRDE-GGIITREEIKNKVDQVLGNQDFKARALELKEKAMSSVREGGSSY 442 (466)
Q Consensus 390 ~--------G~~l~~~~-~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~~~~~~~g~~~ 442 (466)
. |..+-++= .+..|++.|.+++.++|.|.+.++......+.+++..+.|.++.
T Consensus 304 ~isL~Niia~~~v~PEliQ~~~~~~~i~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (373)
T PF02684_consen 304 YISLPNIIAGREVVPELIQEDATPENIAAELLELLENPEKRKKQKELFREIRQLLGPGASSR 365 (373)
T ss_pred EeechhhhcCCCcchhhhcccCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhhhccCCH
Confidence 1 11111100 36789999999999999999878777777777877766666653
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process |
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.86 E-value=1.1e-06 Score=84.66 Aligned_cols=92 Identities=12% Similarity=0.164 Sum_probs=63.9
Q ss_pred hcCCceeecccchh---hhhcCCCcccceec----cCCchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecC
Q 012314 325 VAARGQMISWAPQL---RVLNHPSIACFLSH----CGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRD 397 (466)
Q Consensus 325 ~~~n~~~~~~~p~~---~ll~~~~~~~~i~h----gG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~ 397 (466)
..+++.+.+++|+. .++..+++ +|.- |..+++.||+++|+|+|+.... .....+. ..|..+..
T Consensus 251 ~~~~v~~~g~~~~~~~~~~~~~~d~--~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~----~~~e~~~---~~~~~~~~- 320 (365)
T cd03809 251 LGDRVRFLGYVSDEELAALYRGARA--FVFPSLYEGFGLPVLEAMACGTPVIASNIS----SLPEVAG---DAALYFDP- 320 (365)
T ss_pred CCCeEEECCCCChhHHHHHHhhhhh--hcccchhccCCCCHHHHhcCCCcEEecCCC----Cccceec---CceeeeCC-
Confidence 35788888999875 46777776 5432 3356899999999999986542 2222232 23555532
Q ss_pred CCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 012314 398 EGGIITREEIKNKVDQVLGNQDFKARALELKEK 430 (466)
Q Consensus 398 ~~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~ 430 (466)
-+.+++.++|.++++|++.+.++.+-+..
T Consensus 321 ----~~~~~~~~~i~~l~~~~~~~~~~~~~~~~ 349 (365)
T cd03809 321 ----LDPEALAAAIERLLEDPALREELRERGLA 349 (365)
T ss_pred ----CCHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 37899999999999999887766655443
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. |
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Probab=98.86 E-value=1.6e-06 Score=84.15 Aligned_cols=110 Identities=16% Similarity=0.199 Sum_probs=70.1
Q ss_pred CCceeeccc--chh---hhhcCCCcccceecc---C-CchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecC
Q 012314 327 ARGQMISWA--PQL---RVLNHPSIACFLSHC---G-WNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRD 397 (466)
Q Consensus 327 ~n~~~~~~~--p~~---~ll~~~~~~~~i~hg---G-~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~ 397 (466)
+++.+.++. ++. .+++.+++ |+.-. | ..++.||+++|+|+|+.... ....-+.+. ..|...+
T Consensus 252 ~~v~~~~~~~~~~~~~~~~~~~ad~--~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~----~~~~~i~~~-~~g~~~~-- 322 (372)
T cd03792 252 PDIHVLTLPPVSDLEVNALQRASTV--VLQKSIREGFGLTVTEALWKGKPVIAGPVG----GIPLQIEDG-ETGFLVD-- 322 (372)
T ss_pred CCeEEEecCCCCHHHHHHHHHhCeE--EEeCCCccCCCHHHHHHHHcCCCEEEcCCC----CchhhcccC-CceEEeC--
Confidence 567777776 432 47766776 77533 3 34889999999999987543 334445552 5676653
Q ss_pred CCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Q 012314 398 EGGIITREEIKNKVDQVLGNQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVK 453 (466)
Q Consensus 398 ~~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~ 453 (466)
+.+.++++|.++++|++.+++..+-+.+.. .+.-+-...++++++.+.
T Consensus 323 -----~~~~~a~~i~~ll~~~~~~~~~~~~a~~~~---~~~~s~~~~~~~~~~~~~ 370 (372)
T cd03792 323 -----TVEEAAVRILYLLRDPELRRKMGANAREHV---RENFLITRHLKDYLYLIS 370 (372)
T ss_pred -----CcHHHHHHHHHHHcCHHHHHHHHHHHHHHH---HHHcCHHHHHHHHHHHHH
Confidence 467888899999998877765444333322 224555666666666554
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. |
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Probab=98.84 E-value=4.5e-06 Score=81.44 Aligned_cols=167 Identities=13% Similarity=0.080 Sum_probs=92.4
Q ss_pred EEEEEeccccccCHHHHHHHHHHHHhC--CCCEEEEEcCCCCCCCCCCCchhHHHHh---c---CCceee-cccchh---
Q 012314 271 VVYVSFGSFTILDQVQFQELALGLELC--KRPFLWVVRPDITTDANDRYPEGFQERV---A---ARGQMI-SWAPQL--- 338 (466)
Q Consensus 271 ~v~vs~Gs~~~~~~~~~~~~~~a~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~---~---~n~~~~-~~~p~~--- 338 (466)
++++..|... +......+++++..+ +.++++..++.. ...+.+.+.+.. . .++... +++++.
T Consensus 202 ~~i~~~Grl~--~~Kg~~~li~a~~~l~~~~~l~i~g~g~~----~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 275 (388)
T TIGR02149 202 PYILFVGRIT--RQKGVPHLLDAVHYIPKDVQVVLCAGAPD----TPEVAEEVRQAVALLDRNRTGIIWINKMLPKEELV 275 (388)
T ss_pred eEEEEEcccc--cccCHHHHHHHHHHHhhcCcEEEEeCCCC----cHHHHHHHHHHHHHhccccCceEEecCCCCHHHHH
Confidence 5566677653 334456666676554 455555544331 111122222221 1 234443 677754
Q ss_pred hhhcCCCcccceec----cCCchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCC-CCCcCHHHHHHHHHH
Q 012314 339 RVLNHPSIACFLSH----CGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDE-GGIITREEIKNKVDQ 413 (466)
Q Consensus 339 ~ll~~~~~~~~i~h----gG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~-~~~~~~~~l~~~i~~ 413 (466)
.++..+++ +|.- |...++.||+++|+|+|+.. .......+++. +.|..++.+. ...-..+++.++|.+
T Consensus 276 ~~~~~aDv--~v~ps~~e~~g~~~lEA~a~G~PvI~s~----~~~~~e~i~~~-~~G~~~~~~~~~~~~~~~~l~~~i~~ 348 (388)
T TIGR02149 276 ELLSNAEV--FVCPSIYEPLGIVNLEAMACGTPVVASA----TGGIPEVVVDG-ETGFLVPPDNSDADGFQAELAKAINI 348 (388)
T ss_pred HHHHhCCE--EEeCCccCCCChHHHHHHHcCCCEEEeC----CCCHHHHhhCC-CceEEcCCCCCcccchHHHHHHHHHH
Confidence 47877777 6642 23457799999999999974 34566666663 6788886410 001112899999999
Q ss_pred HhcCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Q 012314 414 VLGNQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVK 453 (466)
Q Consensus 414 ll~~~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~ 453 (466)
+++|++-+++..+-+.+ .+.+.-+.....+++++.+.
T Consensus 349 l~~~~~~~~~~~~~a~~---~~~~~~s~~~~~~~~~~~y~ 385 (388)
T TIGR02149 349 LLADPELAKKMGIAGRK---RAEEEFSWGSIAKKTVEMYR 385 (388)
T ss_pred HHhCHHHHHHHHHHHHH---HHHHhCCHHHHHHHHHHHHH
Confidence 99887655543332222 11123444555555555443
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor. |
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=98.84 E-value=9.3e-06 Score=78.82 Aligned_cols=112 Identities=8% Similarity=0.010 Sum_probs=71.8
Q ss_pred CCceeecccch-hhhhcCCCcccce--ec--cCCchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCCCC
Q 012314 327 ARGQMISWAPQ-LRVLNHPSIACFL--SH--CGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGI 401 (466)
Q Consensus 327 ~n~~~~~~~p~-~~ll~~~~~~~~i--~h--gG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~ 401 (466)
.++++.++..+ ..++..+++ +| ++ |...++.||+++|+|+|+... ......+.+. ..|..+++
T Consensus 255 ~~v~~~g~~~~~~~~~~~adi--~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~----~g~~e~i~~~-~~g~~~~~----- 322 (374)
T TIGR03088 255 HLVWLPGERDDVPALMQALDL--FVLPSLAEGISNTILEAMASGLPVIATAV----GGNPELVQHG-VTGALVPP----- 322 (374)
T ss_pred ceEEEcCCcCCHHHHHHhcCE--EEeccccccCchHHHHHHHcCCCEEEcCC----CCcHHHhcCC-CceEEeCC-----
Confidence 44555555443 468877777 65 32 445689999999999999754 3455566552 56877743
Q ss_pred cCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Q 012314 402 ITREEIKNKVDQVLGNQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVK 453 (466)
Q Consensus 402 ~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~ 453 (466)
-+.++++++|.++++|++.++.. ++..++.+.+.-+.....+++.+.+.
T Consensus 323 ~d~~~la~~i~~l~~~~~~~~~~---~~~a~~~~~~~fs~~~~~~~~~~~y~ 371 (374)
T TIGR03088 323 GDAVALARALQPYVSDPAARRAH---GAAGRARAEQQFSINAMVAAYAGLYD 371 (374)
T ss_pred CCHHHHHHHHHHHHhCHHHHHHH---HHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 47899999999999887655433 33333322234555555666655544
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 | Back alignment and domain information |
|---|
Probab=98.79 E-value=8.2e-08 Score=91.15 Aligned_cols=137 Identities=17% Similarity=0.200 Sum_probs=79.9
Q ss_pred CCCeEEEEEeccccccC----HHHHHHHHHHHHhC-CCCEEEEEcCCCCCCCCCCCchhHHHHhc--CCceeecccch--
Q 012314 267 QPSSVVYVSFGSFTILD----QVQFQELALGLELC-KRPFLWVVRPDITTDANDRYPEGFQERVA--ARGQMISWAPQ-- 337 (466)
Q Consensus 267 ~~~~~v~vs~Gs~~~~~----~~~~~~~~~a~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~--~n~~~~~~~p~-- 337 (466)
.+++.+++++=...... ...+..++.++... +.++||.+.+. +.....+.+... +|+++++-+++
T Consensus 178 ~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~~~~~vi~~~hn~------p~~~~~i~~~l~~~~~v~~~~~l~~~~ 251 (346)
T PF02350_consen 178 APKPYILVTLHPVTNEDNPERLEQILEALKALAERQNVPVIFPLHNN------PRGSDIIIEKLKKYDNVRLIEPLGYEE 251 (346)
T ss_dssp TTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHHTTEEEEEE--S-------HHHHHHHHHHHTT-TTEEEE----HHH
T ss_pred cCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhcCCCcEEEEecCC------chHHHHHHHHhcccCCEEEECCCCHHH
Confidence 45679999984433333 23455566666555 67888888644 222233333222 58888866654
Q ss_pred -hhhhcCCCcccceeccCCchhh-hhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHh
Q 012314 338 -LRVLNHPSIACFLSHCGWNSTM-EGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVL 415 (466)
Q Consensus 338 -~~ll~~~~~~~~i~hgG~~s~~-eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll 415 (466)
..+|.++++ +|+..| ++. ||.+.|||+|.+= |+...=+-+ . .|..+.+. .+.++|.+++++++
T Consensus 252 ~l~ll~~a~~--vvgdSs--GI~eEa~~lg~P~v~iR---~~geRqe~r-~-~~~nvlv~------~~~~~I~~ai~~~l 316 (346)
T PF02350_consen 252 YLSLLKNADL--VVGDSS--GIQEEAPSLGKPVVNIR---DSGERQEGR-E-RGSNVLVG------TDPEAIIQAIEKAL 316 (346)
T ss_dssp HHHHHHHESE--EEESSH--HHHHHGGGGT--EEECS---SS-S-HHHH-H-TTSEEEET------SSHHHHHHHHHHHH
T ss_pred HHHHHhcceE--EEEcCc--cHHHHHHHhCCeEEEec---CCCCCHHHH-h-hcceEEeC------CCHHHHHHHHHHHH
Confidence 568888887 999999 555 9999999999992 222222222 2 26666652 58999999999999
Q ss_pred cCHHHHHHH
Q 012314 416 GNQDFKARA 424 (466)
Q Consensus 416 ~~~~~r~~a 424 (466)
++..+.++.
T Consensus 317 ~~~~~~~~~ 325 (346)
T PF02350_consen 317 SDKDFYRKL 325 (346)
T ss_dssp H-HHHHHHH
T ss_pred hChHHHHhh
Confidence 874555443
|
1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C. |
| >PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
Probab=98.74 E-value=2e-05 Score=77.17 Aligned_cols=113 Identities=15% Similarity=0.137 Sum_probs=75.1
Q ss_pred cCCceeecccchhh---hhcCCCcccceec---------cCC-chhhhhhhcCcceeecccccchhhhHHHHHHhhhcee
Q 012314 326 AARGQMISWAPQLR---VLNHPSIACFLSH---------CGW-NSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGL 392 (466)
Q Consensus 326 ~~n~~~~~~~p~~~---ll~~~~~~~~i~h---------gG~-~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~ 392 (466)
.+++.+.+|+|+.+ ++..+++ +|.- -|. .+++||+++|+|+|+... ......+.+. ..|.
T Consensus 278 ~~~V~~~G~~~~~el~~~l~~aDv--~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~----~g~~E~v~~~-~~G~ 350 (406)
T PRK15427 278 EDVVEMPGFKPSHEVKAMLDDADV--FLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLH----SGIPELVEAD-KSGW 350 (406)
T ss_pred CCeEEEeCCCCHHHHHHHHHhCCE--EEECCccCCCCCccCccHHHHHHHhCCCCEEEeCC----CCchhhhcCC-CceE
Confidence 36788889999764 6767776 6642 244 568999999999999844 3455566653 5788
Q ss_pred EeecCCCCCcCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Q 012314 393 KFDRDEGGIITREEIKNKVDQVLG-NQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVK 453 (466)
Q Consensus 393 ~l~~~~~~~~~~~~l~~~i~~ll~-~~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~ 453 (466)
.+++ -+.++++++|.++++ |++.+++. ++..++.+.+.-+.....+++.+.+.
T Consensus 351 lv~~-----~d~~~la~ai~~l~~~d~~~~~~~---~~~ar~~v~~~f~~~~~~~~l~~~~~ 404 (406)
T PRK15427 351 LVPE-----NDAQALAQRLAAFSQLDTDELAPV---VKRAREKVETDFNQQVINRELASLLQ 404 (406)
T ss_pred EeCC-----CCHHHHHHHHHHHHhCCHHHHHHH---HHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 7743 479999999999998 87655433 33333332234555555566555543
|
|
| >PLN02949 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=98.72 E-value=5.1e-05 Score=75.10 Aligned_cols=114 Identities=15% Similarity=0.068 Sum_probs=68.8
Q ss_pred cCCceeecccchh---hhhcCCCccccee---ccCCc-hhhhhhhcCcceeecccccchhhhHHHHHH-hhh-ceeEeec
Q 012314 326 AARGQMISWAPQL---RVLNHPSIACFLS---HCGWN-STMEGVSNGIPFLCWPYFGDQFLNERYICD-FWK-VGLKFDR 396 (466)
Q Consensus 326 ~~n~~~~~~~p~~---~ll~~~~~~~~i~---hgG~~-s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~-~~G-~G~~l~~ 396 (466)
.+++.+.+++|+. .+|..+++ +|+ +-|.| ++.||+++|+|+|+....+--.+. +.+ .-| .|...
T Consensus 334 ~~~V~f~g~v~~~el~~ll~~a~~--~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~eI---V~~~~~g~tG~l~-- 406 (463)
T PLN02949 334 DGDVEFHKNVSYRDLVRLLGGAVA--GLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKMDI---VLDEDGQQTGFLA-- 406 (463)
T ss_pred CCcEEEeCCCCHHHHHHHHHhCcE--EEeCCccCCCChHHHHHHHcCCcEEEeCCCCCccee---eecCCCCcccccC--
Confidence 4678888999865 47877776 663 34444 789999999999998654311011 111 002 23332
Q ss_pred CCCCCcCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHh
Q 012314 397 DEGGIITREEIKNKVDQVLGN-QDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVKTN 455 (466)
Q Consensus 397 ~~~~~~~~~~l~~~i~~ll~~-~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~ 455 (466)
+ +.++++++|.+++++ ++.+++ |++..++.+. .-+..+..+++.+.+...
T Consensus 407 ---~--~~~~la~ai~~ll~~~~~~r~~---m~~~ar~~~~-~FS~e~~~~~~~~~i~~l 457 (463)
T PLN02949 407 ---T--TVEEYADAILEVLRMRETERLE---IAAAARKRAN-RFSEQRFNEDFKDAIRPI 457 (463)
T ss_pred ---C--CHHHHHHHHHHHHhCCHHHHHH---HHHHHHHHHH-HcCHHHHHHHHHHHHHHH
Confidence 2 789999999999984 454443 3333333322 355566666666666554
|
|
| >TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=98.71 E-value=5.6e-06 Score=81.04 Aligned_cols=86 Identities=12% Similarity=0.086 Sum_probs=61.5
Q ss_pred cCCceeecccchh-hhhcCCCcccce--ec--cCC-chhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCC
Q 012314 326 AARGQMISWAPQL-RVLNHPSIACFL--SH--CGW-NSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEG 399 (466)
Q Consensus 326 ~~n~~~~~~~p~~-~ll~~~~~~~~i--~h--gG~-~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~ 399 (466)
.+++.+.++++.. .++..+++ +| ++ .|. +.+.||+++|+|+|+.+...+.. ... -|.|..+.
T Consensus 279 ~~~V~~~G~v~~~~~~~~~adv--~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~~i-----~~~-~~~g~lv~---- 346 (397)
T TIGR03087 279 LPGVTVTGSVADVRPYLAHAAV--AVAPLRIARGIQNKVLEAMAMAKPVVASPEAAEGI-----DAL-PGAELLVA---- 346 (397)
T ss_pred CCCeEEeeecCCHHHHHHhCCE--EEecccccCCcccHHHHHHHcCCCEEecCcccccc-----ccc-CCcceEeC----
Confidence 4678888999864 48877777 65 32 354 46999999999999997543321 122 26777762
Q ss_pred CCcCHHHHHHHHHHHhcCHHHHHHHH
Q 012314 400 GIITREEIKNKVDQVLGNQDFKARAL 425 (466)
Q Consensus 400 ~~~~~~~l~~~i~~ll~~~~~r~~a~ 425 (466)
-++++++++|.++++|++.+++..
T Consensus 347 --~~~~~la~ai~~ll~~~~~~~~~~ 370 (397)
T TIGR03087 347 --ADPADFAAAILALLANPAEREELG 370 (397)
T ss_pred --CCHHHHHHHHHHHHcCHHHHHHHH
Confidence 378999999999999887655443
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing | Back alignment and domain information |
|---|
Probab=98.69 E-value=4.8e-06 Score=80.02 Aligned_cols=134 Identities=17% Similarity=0.214 Sum_probs=82.8
Q ss_pred CeEEEEEeccc---cccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchhHHHHh--cCCceeecccc---hhhh
Q 012314 269 SSVVYVSFGSF---TILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERV--AARGQMISWAP---QLRV 340 (466)
Q Consensus 269 ~~~v~vs~Gs~---~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~--~~n~~~~~~~p---~~~l 340 (466)
++.|++++=.. .....+.+..+++++...+.++++++... ++. ...+.+.+.+.. .+|+.+.+-++ ...+
T Consensus 201 ~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~~~~~~vi~P~~-~p~-~~~i~~~i~~~~~~~~~v~l~~~l~~~~~l~L 278 (365)
T TIGR03568 201 KPYALVTFHPVTLEKESAEEQIKELLKALDELNKNYIFTYPNA-DAG-SRIINEAIEEYVNEHPNFRLFKSLGQERYLSL 278 (365)
T ss_pred CCEEEEEeCCCcccccCchHHHHHHHHHHHHhccCCEEEEeCC-CCC-chHHHHHHHHHhcCCCCEEEECCCChHHHHHH
Confidence 45888887543 23446779999999988776666665432 000 011222233222 36788876555 4568
Q ss_pred hcCCCcccceeccCCchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeE-eecCCCCCcCHHHHHHHHHHHhcCHH
Q 012314 341 LNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLK-FDRDEGGIITREEIKNKVDQVLGNQD 419 (466)
Q Consensus 341 l~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~-l~~~~~~~~~~~~l~~~i~~ll~~~~ 419 (466)
+.++++ +|+.++.+- .||.+.|+|+|.+- .-| ..+ +. |..+. +. .++++|.+++.+++ +++
T Consensus 279 l~~a~~--vitdSSggi-~EA~~lg~Pvv~l~--~R~----e~~-~~-g~nvl~vg------~~~~~I~~a~~~~~-~~~ 340 (365)
T TIGR03568 279 LKNADA--VIGNSSSGI-IEAPSFGVPTINIG--TRQ----KGR-LR-ADSVIDVD------PDKEEIVKAIEKLL-DPA 340 (365)
T ss_pred HHhCCE--EEEcChhHH-HhhhhcCCCEEeec--CCc----hhh-hh-cCeEEEeC------CCHHHHHHHHHHHh-ChH
Confidence 878777 999886555 89999999999774 122 111 21 43333 32 47899999999965 444
Q ss_pred HHH
Q 012314 420 FKA 422 (466)
Q Consensus 420 ~r~ 422 (466)
+++
T Consensus 341 ~~~ 343 (365)
T TIGR03568 341 FKK 343 (365)
T ss_pred HHH
Confidence 433
|
This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate. |
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.63 E-value=1.8e-06 Score=83.10 Aligned_cols=133 Identities=11% Similarity=0.142 Sum_probs=89.2
Q ss_pred EEEEeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchhHHHHhcCCceeecccchh---hhhcCCCccc
Q 012314 272 VYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQL---RVLNHPSIAC 348 (466)
Q Consensus 272 v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~---~ll~~~~~~~ 348 (466)
.++..|+.. +......++++++..+.+++++..+. ..+.+.+...+|+.+.+++|+. .++..+++-+
T Consensus 197 ~il~~G~~~--~~K~~~~li~a~~~~~~~l~ivG~g~--------~~~~l~~~~~~~V~~~g~~~~~~~~~~~~~ad~~v 266 (351)
T cd03804 197 YYLSVGRLV--PYKRIDLAIEAFNKLGKRLVVIGDGP--------ELDRLRAKAGPNVTFLGRVSDEELRDLYARARAFL 266 (351)
T ss_pred EEEEEEcCc--cccChHHHHHHHHHCCCcEEEEECCh--------hHHHHHhhcCCCEEEecCCCHHHHHHHHHhCCEEE
Confidence 344566543 33456778888888887766655433 1234444557899999999974 4787777733
Q ss_pred ceeccCC-chhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCH-HHHHHH
Q 012314 349 FLSHCGW-NSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQ-DFKARA 424 (466)
Q Consensus 349 ~i~hgG~-~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~-~~r~~a 424 (466)
+-+.-|. .++.||+++|+|+|+....+ ....+++. +.|..+++ -+.++++++|.++++|+ ..++++
T Consensus 267 ~ps~e~~g~~~~Eama~G~Pvi~~~~~~----~~e~i~~~-~~G~~~~~-----~~~~~la~~i~~l~~~~~~~~~~~ 334 (351)
T cd03804 267 FPAEEDFGIVPVEAMASGTPVIAYGKGG----ALETVIDG-VTGILFEE-----QTVESLAAAVERFEKNEDFDPQAI 334 (351)
T ss_pred ECCcCCCCchHHHHHHcCCCEEEeCCCC----CcceeeCC-CCEEEeCC-----CCHHHHHHHHHHHHhCcccCHHHH
Confidence 2234444 45689999999999985433 44445553 68888853 47889999999999887 344433
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. |
| >COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.63 E-value=4.9e-06 Score=77.33 Aligned_cols=330 Identities=18% Similarity=0.176 Sum_probs=177.0
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCC-CEEEEEeCCcch--HHHHHhhhcCCCCCCCeEEEecC-CC--CCCCCC
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHG-FRVTFVNTDYNH--KRVVESLQGKNYLGEQIHLVSIP-DG--MEPWED 74 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rG-h~Vt~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~ 74 (466)
|+++||+++. +.+=.+.-|..+.++|.+.+ .+..++.+.-+. +..... ++...+. .. +.....
T Consensus 1 m~~~Kv~~I~-GTRPE~iKmapli~~~~~~~~~~~~vi~TGQH~d~em~~~~----------le~~~i~~pdy~L~i~~~ 69 (383)
T COG0381 1 MKMLKVLTIF-GTRPEAIKMAPLVKALEKDPDFELIVIHTGQHRDYEMLDQV----------LELFGIRKPDYDLNIMKP 69 (383)
T ss_pred CCceEEEEEE-ecCHHHHHHhHHHHHHHhCCCCceEEEEecccccHHHHHHH----------HHHhCCCCCCcchhcccc
Confidence 7888887765 88899999999999999987 666666666555 333222 1222221 11 111111
Q ss_pred CccHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEe--CCCch-hHHHHHHHcCCceEEeccchhHHHHHHhhcccc
Q 012314 75 RNDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIA--DGNIG-WSMEIAKKMNVRGAVFWPSSAASVALVFRIPKL 151 (466)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~--D~~~~-~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~ 151 (466)
...+.. ........+.+++++ .+||+|++ |..+. ++..+|.+.+||+.-+-.+--+
T Consensus 70 ~~tl~~----~t~~~i~~~~~vl~~------~kPD~VlVhGDT~t~lA~alaa~~~~IpV~HvEAGlRt----------- 128 (383)
T COG0381 70 GQTLGE----ITGNIIEGLSKVLEE------EKPDLVLVHGDTNTTLAGALAAFYLKIPVGHVEAGLRT----------- 128 (383)
T ss_pred CCCHHH----HHHHHHHHHHHHHHh------hCCCEEEEeCCcchHHHHHHHHHHhCCceEEEeccccc-----------
Confidence 222222 223345567788887 88999885 55555 6688999999999885422211
Q ss_pred cccCccCCCCCCCccccccccCCCCCCCccccc----ccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHHH
Q 012314 152 IDDGIIDSHGTPMSMQMFRIAPKMPEMNSRDCF----WAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAF 227 (466)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~~ 227 (466)
... + +|.-.-|.+. ...+... ....+.+ .+.-...+.|++.+.+.+|-- .
T Consensus 129 -------------~~~---~---~PEE~NR~l~~~~S~~hfapt---e~ar~nL---l~EG~~~~~IfvtGnt~iDal-~ 182 (383)
T COG0381 129 -------------GDL---Y---FPEEINRRLTSHLSDLHFAPT---EIARKNL---LREGVPEKRIFVTGNTVIDAL-L 182 (383)
T ss_pred -------------CCC---C---CcHHHHHHHHHHhhhhhcCCh---HHHHHHH---HHcCCCccceEEeCChHHHHH-H
Confidence 000 0 0000000000 0000000 0000000 001122334555555544422 0
Q ss_pred hhcCCcceeccccCCCCCCCCCCCcccCCccchhh-hccCCCCeEEEEEeccccccCHHHHHHHHHHH----HhCCCCEE
Q 012314 228 TTFPELLPIGPLLASNRLGNTAGYFWCEDSNCLKW-LDQQQPSSVVYVSFGSFTILDQVQFQELALGL----ELCKRPFL 302 (466)
Q Consensus 228 ~~~p~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~----~~~~~~~i 302 (466)
..... . ..+.....- +.. +.+..+++++=-..... +.+..+.+++ +.. ..+.
T Consensus 183 ~~~~~-------~-------------~~~~~~~~~~~~~-~~~~~iLvT~HRreN~~-~~~~~i~~al~~i~~~~-~~~~ 239 (383)
T COG0381 183 NTRDR-------V-------------LEDSKILAKGLDD-KDKKYILVTAHRRENVG-EPLEEICEALREIAEEY-PDVI 239 (383)
T ss_pred HHHhh-------h-------------ccchhhHHhhhcc-ccCcEEEEEcchhhccc-ccHHHHHHHHHHHHHhC-CCce
Confidence 00000 0 001111111 122 22348888774332222 4455555554 433 3445
Q ss_pred EEEcCCCCCCCCCCCchhHHHHhc--CCceee---cccchhhhhcCCCcccceeccCCchhhhhhhcCcceeecccccch
Q 012314 303 WVVRPDITTDANDRYPEGFQERVA--ARGQMI---SWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQ 377 (466)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~--~n~~~~---~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ 377 (466)
+++..... ..+.+-....+. +++++. +|.+...++.++.+ ++|-.|. ---||-..|+|++++=...|+
T Consensus 240 viyp~H~~----~~v~e~~~~~L~~~~~v~li~pl~~~~f~~L~~~a~~--iltDSGg-iqEEAp~lg~Pvl~lR~~TER 312 (383)
T COG0381 240 VIYPVHPR----PRVRELVLKRLKNVERVKLIDPLGYLDFHNLMKNAFL--ILTDSGG-IQEEAPSLGKPVLVLRDTTER 312 (383)
T ss_pred EEEeCCCC----hhhhHHHHHHhCCCCcEEEeCCcchHHHHHHHHhceE--EEecCCc-hhhhHHhcCCcEEeeccCCCC
Confidence 55544311 112121222333 457765 77888899988877 9997663 457999999999999888888
Q ss_pred hhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 012314 378 FLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALELKE 429 (466)
Q Consensus 378 ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~ 429 (466)
+. ++ ++ |.-+.+. .+.+.|.+++.++++++++.+|.+...-
T Consensus 313 PE---~v-~a-gt~~lvg------~~~~~i~~~~~~ll~~~~~~~~m~~~~n 353 (383)
T COG0381 313 PE---GV-EA-GTNILVG------TDEENILDAATELLEDEEFYERMSNAKN 353 (383)
T ss_pred cc---ce-ec-CceEEeC------ccHHHHHHHHHHHhhChHHHHHHhcccC
Confidence 87 34 33 6666664 4679999999999999888886554333
|
|
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.60 E-value=9.5e-05 Score=72.73 Aligned_cols=80 Identities=19% Similarity=0.155 Sum_probs=54.5
Q ss_pred cCCceeecccchh---hhhcCCCcccceec---cCC-chhhhhhhcCcceeecccccchhhhHHHHH---HhhhceeEee
Q 012314 326 AARGQMISWAPQL---RVLNHPSIACFLSH---CGW-NSTMEGVSNGIPFLCWPYFGDQFLNERYIC---DFWKVGLKFD 395 (466)
Q Consensus 326 ~~n~~~~~~~p~~---~ll~~~~~~~~i~h---gG~-~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~---~~~G~G~~l~ 395 (466)
.+++.+.+++|+. .+|..+++ +|+- -|. -++.||+++|+|+|+.-..+.- ..-++ +. ..|...
T Consensus 304 ~~~V~f~g~v~~~~l~~~l~~adv--~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~---~~iv~~~~~g-~~G~l~- 376 (419)
T cd03806 304 EDKVEFVVNAPFEELLEELSTASI--GLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPL---LDIVVPWDGG-PTGFLA- 376 (419)
T ss_pred CCeEEEecCCCHHHHHHHHHhCeE--EEECCccCCcccHHHHHHHcCCcEEEEcCCCCc---hheeeccCCC-CceEEe-
Confidence 4678888998865 47877776 5542 222 4789999999999987433211 11122 32 567665
Q ss_pred cCCCCCcCHHHHHHHHHHHhcCH
Q 012314 396 RDEGGIITREEIKNKVDQVLGNQ 418 (466)
Q Consensus 396 ~~~~~~~~~~~l~~~i~~ll~~~ 418 (466)
. ++++++++|.++++++
T Consensus 377 ----~--d~~~la~ai~~ll~~~ 393 (419)
T cd03806 377 ----S--TAEEYAEAIEKILSLS 393 (419)
T ss_pred ----C--CHHHHHHHHHHHHhCC
Confidence 2 7999999999999865
|
ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. |
| >KOG3349 consensus Predicted glycosyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.57 E-value=5e-07 Score=71.14 Aligned_cols=119 Identities=13% Similarity=0.130 Sum_probs=81.8
Q ss_pred eEEEEEeccccccC---HHHHHHHHHHHHhCCC-CEEEEEcCCCCCCCCCCCchhHHHHhc-CCcee--ecccch-hhhh
Q 012314 270 SVVYVSFGSFTILD---QVQFQELALGLELCKR-PFLWVVRPDITTDANDRYPEGFQERVA-ARGQM--ISWAPQ-LRVL 341 (466)
Q Consensus 270 ~~v~vs~Gs~~~~~---~~~~~~~~~a~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~-~n~~~--~~~~p~-~~ll 341 (466)
..+||+-||..... .-......+.+.+.|. +.|..++.+. ...++....... ....+ .+|-|- .+..
T Consensus 4 ~~vFVTVGtT~Fd~LI~~Vl~~~~~~~L~k~G~~kLiiQ~Grg~-----~~~~d~~~~~~k~~gl~id~y~f~psl~e~I 78 (170)
T KOG3349|consen 4 MTVFVTVGTTSFDDLISCVLSEEFLQELQKRGFTKLIIQIGRGQ-----PFFGDPIDLIRKNGGLTIDGYDFSPSLTEDI 78 (170)
T ss_pred eEEEEEeccccHHHHHHHHcCHHHHHHHHHcCccEEEEEecCCc-----cCCCCHHHhhcccCCeEEEEEecCccHHHHH
Confidence 38999999975321 1124446667777785 5677777661 222332221111 22222 377775 4577
Q ss_pred cCCCcccceeccCCchhhhhhhcCcceeeccc----ccchhhhHHHHHHhhhceeEeec
Q 012314 342 NHPSIACFLSHCGWNSTMEGVSNGIPFLCWPY----FGDQFLNERYICDFWKVGLKFDR 396 (466)
Q Consensus 342 ~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~----~~DQ~~~a~rv~~~~G~G~~l~~ 396 (466)
..+++ +|+|+|+||++|.|..|+|.|+++- ...|-..|..+++ .|.=....+
T Consensus 79 ~~Adl--VIsHAGaGS~letL~l~KPlivVvNd~LMDNHQ~ELA~qL~~-egyL~~C~p 134 (170)
T KOG3349|consen 79 RSADL--VISHAGAGSCLETLRLGKPLIVVVNDSLMDNHQLELAKQLAE-EGYLYYCTP 134 (170)
T ss_pred hhccE--EEecCCcchHHHHHHcCCCEEEEeChHhhhhHHHHHHHHHHh-cCcEEEeec
Confidence 66776 9999999999999999999999995 4689999999998 488777754
|
|
| >cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=98.51 E-value=7.8e-05 Score=72.27 Aligned_cols=79 Identities=13% Similarity=0.078 Sum_probs=52.8
Q ss_pred cCCceeecccchhh---hhcCCCcccce------eccCC-chhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEee
Q 012314 326 AARGQMISWAPQLR---VLNHPSIACFL------SHCGW-NSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFD 395 (466)
Q Consensus 326 ~~n~~~~~~~p~~~---ll~~~~~~~~i------~hgG~-~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~ 395 (466)
.+|+.+.+++|+.+ ++.++++.++- +.++. +.+.|++++|+|+|+.++ ...++. +-|..+.
T Consensus 253 ~~nV~~~G~~~~~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~-------~~~~~~--~~~~~~~ 323 (373)
T cd04950 253 LPNVHYLGPKPYKELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPL-------PEVRRY--EDEVVLI 323 (373)
T ss_pred CCCEEEeCCCCHHHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCCCEEecCc-------HHHHhh--cCcEEEe
Confidence 48999999998664 67777773332 22332 458999999999998753 222332 3344443
Q ss_pred cCCCCCcCHHHHHHHHHHHhcCH
Q 012314 396 RDEGGIITREEIKNKVDQVLGNQ 418 (466)
Q Consensus 396 ~~~~~~~~~~~l~~~i~~ll~~~ 418 (466)
. + +++++.++|.+++.++
T Consensus 324 ~---~--d~~~~~~ai~~~l~~~ 341 (373)
T cd04950 324 A---D--DPEEFVAAIEKALLED 341 (373)
T ss_pred C---C--CHHHHHHHHHHHHhcC
Confidence 1 2 7999999999976543
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >PLN00142 sucrose synthase | Back alignment and domain information |
|---|
Probab=98.51 E-value=4.7e-05 Score=78.69 Aligned_cols=68 Identities=18% Similarity=0.254 Sum_probs=47.2
Q ss_pred cee---ccCCc-hhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHH----hcCHHH
Q 012314 349 FLS---HCGWN-STMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQV----LGNQDF 420 (466)
Q Consensus 349 ~i~---hgG~~-s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~l----l~~~~~ 420 (466)
||. +-|.| ++.||+++|+|+|+.. .......|++. .-|..+++ -++++++++|.++ +.|++.
T Consensus 670 fVlPS~~EgFGLvvLEAMA~GlPVVATd----vGG~~EIV~dG-~tG~LV~P-----~D~eaLA~aI~~lLekLl~Dp~l 739 (815)
T PLN00142 670 FVQPALYEAFGLTVVEAMTCGLPTFATC----QGGPAEIIVDG-VSGFHIDP-----YHGDEAANKIADFFEKCKEDPSY 739 (815)
T ss_pred EEeCCcccCCCHHHHHHHHcCCCEEEcC----CCCHHHHhcCC-CcEEEeCC-----CCHHHHHHHHHHHHHHhcCCHHH
Confidence 664 24544 8899999999999974 44566666662 56888864 3678888887654 578776
Q ss_pred HHHHHH
Q 012314 421 KARALE 426 (466)
Q Consensus 421 r~~a~~ 426 (466)
+++..+
T Consensus 740 r~~mg~ 745 (815)
T PLN00142 740 WNKISD 745 (815)
T ss_pred HHHHHH
Confidence 665443
|
|
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=98.49 E-value=0.00037 Score=71.93 Aligned_cols=91 Identities=14% Similarity=0.156 Sum_probs=62.3
Q ss_pred cCCceeecccchh-hhhcCCCccccee---ccC-CchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCCC
Q 012314 326 AARGQMISWAPQL-RVLNHPSIACFLS---HCG-WNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGG 400 (466)
Q Consensus 326 ~~n~~~~~~~p~~-~ll~~~~~~~~i~---hgG-~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~ 400 (466)
.+++.+.+|.+.. .++..+++ +|. +.| .+++.||+++|+|+|+... ......|.+. ..|..+++ +
T Consensus 573 ~~~V~flG~~~dv~~ll~aaDv--~VlpS~~Egfp~vlLEAMA~G~PVVat~~----gG~~EiV~dg-~~GlLv~~---~ 642 (694)
T PRK15179 573 GERILFTGLSRRVGYWLTQFNA--FLLLSRFEGLPNVLIEAQFSGVPVVTTLA----GGAGEAVQEG-VTGLTLPA---D 642 (694)
T ss_pred CCcEEEcCCcchHHHHHHhcCE--EEeccccccchHHHHHHHHcCCeEEEECC----CChHHHccCC-CCEEEeCC---C
Confidence 3678888888753 58877777 554 455 4688999999999999854 3455566652 46888864 5
Q ss_pred CcCHHHHHHHHHHHhc----CHHHHHHHHH
Q 012314 401 IITREEIKNKVDQVLG----NQDFKARALE 426 (466)
Q Consensus 401 ~~~~~~l~~~i~~ll~----~~~~r~~a~~ 426 (466)
..+++++.+++.+++. ++.+++++++
T Consensus 643 d~~~~~La~aL~~ll~~l~~~~~l~~~ar~ 672 (694)
T PRK15179 643 TVTAPDVAEALARIHDMCAADPGIARKAAD 672 (694)
T ss_pred CCChHHHHHHHHHHHhChhccHHHHHHHHH
Confidence 5566777777766654 4556655443
|
|
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=98.45 E-value=5.9e-05 Score=75.39 Aligned_cols=164 Identities=15% Similarity=0.191 Sum_probs=86.2
Q ss_pred eEEEEEeccccccCHHHHHHHHHHHHh---CCCCEEEEEcCCCCCCCCCCCchhH---HHHhcCCcee-ecccch--hhh
Q 012314 270 SVVYVSFGSFTILDQVQFQELALGLEL---CKRPFLWVVRPDITTDANDRYPEGF---QERVAARGQM-ISWAPQ--LRV 340 (466)
Q Consensus 270 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~---~~~~~i~~~~~~~~~~~~~~~~~~~---~~~~~~n~~~-~~~~p~--~~l 340 (466)
.++++..|... +...+..+++|+.. .+.+++++..+. ....+.+ .++.+.++.+ .+|-.. ..+
T Consensus 282 ~~~i~~vGRl~--~~KG~~~li~a~~~l~~~~~~lvivG~g~------~~~~~~l~~l~~~~~~~v~~~~g~~~~~~~~~ 353 (466)
T PRK00654 282 APLFAMVSRLT--EQKGLDLVLEALPELLEQGGQLVLLGTGD------PELEEAFRALAARYPGKVGVQIGYDEALAHRI 353 (466)
T ss_pred CcEEEEeeccc--cccChHHHHHHHHHHHhcCCEEEEEecCc------HHHHHHHHHHHHHCCCcEEEEEeCCHHHHHHH
Confidence 35666677653 33344455555533 356666554322 1111222 2233455543 355322 247
Q ss_pred hcCCCccccee---ccCCc-hhhhhhhcCcceeeccccc--chhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHH
Q 012314 341 LNHPSIACFLS---HCGWN-STMEGVSNGIPFLCWPYFG--DQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQV 414 (466)
Q Consensus 341 l~~~~~~~~i~---hgG~~-s~~eal~~GvP~l~~P~~~--DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~l 414 (466)
++.+++ +|. +-|.| +.+||+++|+|+|+....+ |.-.....-.+. +.|..+++ -++++|+++|.++
T Consensus 354 ~~~aDv--~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~-~~G~lv~~-----~d~~~la~~i~~~ 425 (466)
T PRK00654 354 YAGADM--FLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGE-ATGFVFDD-----FNAEDLLRALRRA 425 (466)
T ss_pred HhhCCE--EEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCC-CceEEeCC-----CCHHHHHHHHHHH
Confidence 777777 664 34554 7899999999999875432 211110000122 67888853 4789999999998
Q ss_pred hc---CHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHh
Q 012314 415 LG---NQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVKTN 455 (466)
Q Consensus 415 l~---~~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~ 455 (466)
+. +++.++ ++++...+ ..-+-.+..++.++.+.+.
T Consensus 426 l~~~~~~~~~~---~~~~~~~~---~~fsw~~~a~~~~~lY~~~ 463 (466)
T PRK00654 426 LELYRQPPLWR---ALQRQAMA---QDFSWDKSAEEYLELYRRL 463 (466)
T ss_pred HHHhcCHHHHH---HHHHHHhc---cCCChHHHHHHHHHHHHHH
Confidence 85 333222 23332221 2344455556655555443
|
|
| >PLN02501 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=98.41 E-value=9.2e-05 Score=74.40 Aligned_cols=116 Identities=16% Similarity=0.066 Sum_probs=68.5
Q ss_pred CHHHHHHHHHHHHhC-----CCCEEEEEcCCCCCCCCCCCchhHHHHhcC---Cceeecccchh-hhhcCCCcccceec-
Q 012314 283 DQVQFQELALGLELC-----KRPFLWVVRPDITTDANDRYPEGFQERVAA---RGQMISWAPQL-RVLNHPSIACFLSH- 352 (466)
Q Consensus 283 ~~~~~~~~~~a~~~~-----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~---n~~~~~~~p~~-~ll~~~~~~~~i~h- 352 (466)
....+..++++++.+ +.+ ++++|.+ +..+.+...... ++.+.++.++. .++..+++ ||.-
T Consensus 557 ~EKGld~LLeAla~L~~~~pnvr-LvIVGDG-------P~reeLe~la~eLgL~V~FLG~~dd~~~lyasaDV--FVlPS 626 (794)
T PLN02501 557 WAKGYRELIDLLAKHKNELDGFN-LDVFGNG-------EDAHEVQRAAKRLDLNLNFLKGRDHADDSLHGYKV--FINPS 626 (794)
T ss_pred ccCCHHHHHHHHHHHHhhCCCeE-EEEEcCC-------ccHHHHHHHHHHcCCEEEecCCCCCHHHHHHhCCE--EEECC
Confidence 344566666666432 233 3444544 223344333222 34455666655 48866666 7752
Q ss_pred --cC-CchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCHHHH
Q 012314 353 --CG-WNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFK 421 (466)
Q Consensus 353 --gG-~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r 421 (466)
-| ..+++||+++|+|+|+....+... +.+ |.+..+. -+.+++.++|.++|.++..+
T Consensus 627 ~sEgFGlVlLEAMA~GlPVVATd~pG~e~-----V~~--g~nGll~------~D~EafAeAI~~LLsd~~~r 685 (794)
T PLN02501 627 ISDVLCTATAEALAMGKFVVCADHPSNEF-----FRS--FPNCLTY------KTSEDFVAKVKEALANEPQP 685 (794)
T ss_pred CcccchHHHHHHHHcCCCEEEecCCCCce-----Eee--cCCeEec------CCHHHHHHHHHHHHhCchhh
Confidence 23 467899999999999996654321 222 3333332 26899999999999887643
|
|
| >COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.40 E-value=3.8e-05 Score=71.34 Aligned_cols=346 Identities=14% Similarity=0.075 Sum_probs=173.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCC-CCccHHHHH
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWE-DRNDLGKLI 82 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 82 (466)
+||++.+.-..|++. --.|.++|++|==+|.|++-.. +...+. +++-.. +..+ ....+.+.+
T Consensus 2 ~ki~i~AGE~SGDll-Ga~LikaLk~~~~~~efvGvgG--~~m~ae---------G~~sl~-----~~~elsvmGf~EVL 64 (381)
T COG0763 2 LKIALSAGEASGDLL-GAGLIKALKARYPDVEFVGVGG--EKMEAE---------GLESLF-----DMEELSVMGFVEVL 64 (381)
T ss_pred ceEEEEecccchhhH-HHHHHHHHHhhCCCeEEEEecc--HHHHhc---------cCcccc-----CHHHHHHhhHHHHH
Confidence 578888888888887 5677888887633777777643 223332 211110 0000 112222222
Q ss_pred HHHHHhccHHHHHHHHHHhcCCCCCccEEE-eCCCchhHHHHH---HHcC--CceEEecc-chhHHHHHHhhcccccccC
Q 012314 83 EKCLQVMPGKLEELIEEINSREDEKIDCFI-ADGNIGWSMEIA---KKMN--VRGAVFWP-SSAASVALVFRIPKLIDDG 155 (466)
Q Consensus 83 ~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV-~D~~~~~~~~~A---~~lg--iP~v~~~~-~~~~~~~~~~~~p~~~~~~ 155 (466)
..+ -......+++++.+.. .+||++| +|. .-....++ ++.| +|.|.|.. +-+.
T Consensus 65 ~~l-p~llk~~~~~~~~i~~---~kpD~~i~IDs-PdFnl~vak~lrk~~p~i~iihYV~PsVWA--------------- 124 (381)
T COG0763 65 GRL-PRLLKIRRELVRYILA---NKPDVLILIDS-PDFNLRVAKKLRKAGPKIKIIHYVSPSVWA--------------- 124 (381)
T ss_pred HHH-HHHHHHHHHHHHHHHh---cCCCEEEEeCC-CCCchHHHHHHHHhCCCCCeEEEECcceee---------------
Confidence 222 1123334555665555 7899988 454 22344444 4556 88887542 1110
Q ss_pred ccCCCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHHHhhcCCcce
Q 012314 156 IIDSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTFPELLP 235 (466)
Q Consensus 156 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~~~~~p~v~~ 235 (466)
+ .+.+.. .....+|.++.--+++-++. ....-++.|
T Consensus 125 ----------------------W-----------r~~Ra~----------~i~~~~D~lLailPFE~~~y-~k~g~~~~y 160 (381)
T COG0763 125 ----------------------W-----------RPKRAV----------KIAKYVDHLLAILPFEPAFY-DKFGLPCTY 160 (381)
T ss_pred ----------------------e-----------chhhHH----------HHHHHhhHeeeecCCCHHHH-HhcCCCeEE
Confidence 0 011100 11245666666666554544 233334899
Q ss_pred ec-cccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhC-----CCCEEEEEcCCC
Q 012314 236 IG-PLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELC-----KRPFLWVVRPDI 309 (466)
Q Consensus 236 VG-pl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~-----~~~~i~~~~~~~ 309 (466)
|| |+....+.. +..+.+..-+.-..+++++.+-.||-.+.=...+..+.++...+ +.+++.-+.+.
T Consensus 161 VGHpl~d~i~~~-------~~r~~ar~~l~~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~~vlp~~~~- 232 (381)
T COG0763 161 VGHPLADEIPLL-------PDREAAREKLGIDADEKTLALLPGSRRSEIRRLLPPFVQAAQELKARYPDLKFVLPLVNA- 232 (381)
T ss_pred eCChhhhhcccc-------ccHHHHHHHhCCCCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCceEEEecCcH-
Confidence 99 555544321 22333444443334566999999986432233445555555333 35666555433
Q ss_pred CCCCCCCCchhHHHHhcCCc-eeecccc-h--hhhhcCCCcccceeccCCchhhhhhhcCcceeeccc-ccchhhhHHHH
Q 012314 310 TTDANDRYPEGFQERVAARG-QMISWAP-Q--LRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPY-FGDQFLNERYI 384 (466)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~n~-~~~~~~p-~--~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~-~~DQ~~~a~rv 384 (466)
....+... ....+. ...-+++ + ...+..+++ .+.-+|. -++|+..+|+|||+.=- ..=-...+.++
T Consensus 233 ---~~~~~~~~---~~~~~~~~~~~~~~~~~~~~a~~~aD~--al~aSGT-~tLE~aL~g~P~Vv~Yk~~~it~~iak~l 303 (381)
T COG0763 233 ---KYRRIIEE---ALKWEVAGLSLILIDGEKRKAFAAADA--ALAASGT-ATLEAALAGTPMVVAYKVKPITYFIAKRL 303 (381)
T ss_pred ---HHHHHHHH---HhhccccCceEEecCchHHHHHHHhhH--HHHhccH-HHHHHHHhCCCEEEEEeccHHHHHHHHHh
Confidence 11111111 111222 1222222 2 236655555 6655554 46899999999987521 11122233333
Q ss_pred HHhhhc--------eeEeecCC-CCCcCHHHHHHHHHHHhcCH----HHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Q 012314 385 CDFWKV--------GLKFDRDE-GGIITREEIKNKVDQVLGNQ----DFKARALELKEKAMSSVREGGSSYKTFQNFLQW 451 (466)
Q Consensus 385 ~~~~G~--------G~~l~~~~-~~~~~~~~l~~~i~~ll~~~----~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~ 451 (466)
.+ +.. |..+-|+= .+..+++.|++++.+++.|. .+++...+|++.++ ++++++...+-+++.
T Consensus 304 vk-~~yisLpNIi~~~~ivPEliq~~~~pe~la~~l~~ll~~~~~~~~~~~~~~~l~~~l~----~~~~~e~aA~~vl~~ 378 (381)
T COG0763 304 VK-LPYVSLPNILAGREIVPELIQEDCTPENLARALEELLLNGDRREALKEKFRELHQYLR----EDPASEIAAQAVLEL 378 (381)
T ss_pred cc-CCcccchHHhcCCccchHHHhhhcCHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHc----CCcHHHHHHHHHHHH
Confidence 32 121 11111100 25678999999999999988 45555555555554 355655555555554
Q ss_pred H
Q 012314 452 V 452 (466)
Q Consensus 452 ~ 452 (466)
+
T Consensus 379 ~ 379 (381)
T COG0763 379 L 379 (381)
T ss_pred h
Confidence 3
|
|
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type | Back alignment and domain information |
|---|
Probab=98.36 E-value=0.00025 Score=71.19 Aligned_cols=159 Identities=13% Similarity=0.106 Sum_probs=85.9
Q ss_pred eEEEEEeccccccCHHHHHHHHHHHH---hCCCCEEEEEcCCCCCCCCCCCchhH---HHHhcCCceeecccchh---hh
Q 012314 270 SVVYVSFGSFTILDQVQFQELALGLE---LCKRPFLWVVRPDITTDANDRYPEGF---QERVAARGQMISWAPQL---RV 340 (466)
Q Consensus 270 ~~v~vs~Gs~~~~~~~~~~~~~~a~~---~~~~~~i~~~~~~~~~~~~~~~~~~~---~~~~~~n~~~~~~~p~~---~l 340 (466)
.++++..|... +...+..+++++. +.+.++++...++ +...+.+ .++.+.++.+....+.. .+
T Consensus 291 ~~~i~~vGrl~--~~Kg~~~li~a~~~l~~~~~~lvi~G~g~------~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~ 362 (473)
T TIGR02095 291 VPLFGVISRLT--QQKGVDLLLAALPELLELGGQLVVLGTGD------PELEEALRELAERYPGNVRVIIGYDEALAHLI 362 (473)
T ss_pred CCEEEEEecCc--cccChHHHHHHHHHHHHcCcEEEEECCCC------HHHHHHHHHHHHHCCCcEEEEEcCCHHHHHHH
Confidence 35666677653 2333444455543 3345555443322 1122222 22334566655444443 47
Q ss_pred hcCCCcccceec---cCCc-hhhhhhhcCcceeecccccchhhhHHHHHH-----hhhceeEeecCCCCCcCHHHHHHHH
Q 012314 341 LNHPSIACFLSH---CGWN-STMEGVSNGIPFLCWPYFGDQFLNERYICD-----FWKVGLKFDRDEGGIITREEIKNKV 411 (466)
Q Consensus 341 l~~~~~~~~i~h---gG~~-s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~-----~~G~G~~l~~~~~~~~~~~~l~~~i 411 (466)
+..+++ +|.- -|.| +.+||+++|+|+|+....+ ....+.+ .-+.|..+. .-++++|+++|
T Consensus 363 ~~~aDv--~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg----~~e~v~~~~~~~~~~~G~l~~-----~~d~~~la~~i 431 (473)
T TIGR02095 363 YAGADF--ILMPSRFEPCGLTQLYAMRYGTVPIVRRTGG----LADTVVDGDPEAESGTGFLFE-----EYDPGALLAAL 431 (473)
T ss_pred HHhCCE--EEeCCCcCCcHHHHHHHHHCCCCeEEccCCC----ccceEecCCCCCCCCceEEeC-----CCCHHHHHHHH
Confidence 766776 6642 3444 7799999999999875532 2222222 016788884 35789999999
Q ss_pred HHHhc----CHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Q 012314 412 DQVLG----NQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVK 453 (466)
Q Consensus 412 ~~ll~----~~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~ 453 (466)
.+++. +++.+++ +++... ...-+-.+..++.++.+.
T Consensus 432 ~~~l~~~~~~~~~~~~---~~~~~~---~~~fsw~~~a~~~~~~Y~ 471 (473)
T TIGR02095 432 SRALRLYRQDPSLWEA---LQKNAM---SQDFSWDKSAKQYVELYR 471 (473)
T ss_pred HHHHHHHhcCHHHHHH---HHHHHh---ccCCCcHHHHHHHHHHHH
Confidence 99986 5544433 222222 123444555566655544
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. |
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.36 E-value=0.00015 Score=72.84 Aligned_cols=128 Identities=16% Similarity=0.193 Sum_probs=70.9
Q ss_pred eEEEEEeccccccCHHHHHHHHHHH---HhCCCCEEEEEcCCCCCCCCCCCchhHHH---HhcCCceee-cccch--hhh
Q 012314 270 SVVYVSFGSFTILDQVQFQELALGL---ELCKRPFLWVVRPDITTDANDRYPEGFQE---RVAARGQMI-SWAPQ--LRV 340 (466)
Q Consensus 270 ~~v~vs~Gs~~~~~~~~~~~~~~a~---~~~~~~~i~~~~~~~~~~~~~~~~~~~~~---~~~~n~~~~-~~~p~--~~l 340 (466)
..+++..|... +...+..+++++ .+.+.+++++..++ ....+.+.+ +...|+.+. .+... ..+
T Consensus 296 ~~~i~~vGrl~--~~Kg~~~li~a~~~l~~~~~~lvi~G~g~------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 367 (476)
T cd03791 296 APLFGFVGRLT--EQKGIDLLLEALPELLELGGQLVILGSGD------PEYEEALRELAARYPGRVAVLIGYDEALAHLI 367 (476)
T ss_pred CCEEEEEeecc--ccccHHHHHHHHHHHHHcCcEEEEEecCC------HHHHHHHHHHHHhCCCcEEEEEeCCHHHHHHH
Confidence 35666677653 223344444444 33345555544332 111122222 224666654 44322 246
Q ss_pred hcCCCcccceec---cCC-chhhhhhhcCcceeecccccchhhhHHHHHHh-----hhceeEeecCCCCCcCHHHHHHHH
Q 012314 341 LNHPSIACFLSH---CGW-NSTMEGVSNGIPFLCWPYFGDQFLNERYICDF-----WKVGLKFDRDEGGIITREEIKNKV 411 (466)
Q Consensus 341 l~~~~~~~~i~h---gG~-~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~-----~G~G~~l~~~~~~~~~~~~l~~~i 411 (466)
+..+++ ++.- -|. .+.+||+++|+|+|+....+ ....+.+. -|.|..+++ -++++|.+++
T Consensus 368 ~~~aDv--~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg----~~e~v~~~~~~~~~~~G~~~~~-----~~~~~l~~~i 436 (476)
T cd03791 368 YAGADF--FLMPSRFEPCGLTQMYAMRYGTVPIVRATGG----LADTVIDYNEDTGEGTGFVFEG-----YNADALLAAL 436 (476)
T ss_pred HHhCCE--EECCCCCCCCcHHHHHHhhCCCCCEECcCCC----ccceEeCCcCCCCCCCeEEeCC-----CCHHHHHHHH
Confidence 766666 6642 233 46799999999999876532 12222220 257998853 4689999999
Q ss_pred HHHhc
Q 012314 412 DQVLG 416 (466)
Q Consensus 412 ~~ll~ 416 (466)
.+++.
T Consensus 437 ~~~l~ 441 (476)
T cd03791 437 RRALA 441 (476)
T ss_pred HHHHH
Confidence 99885
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| >TIGR02918 accessory Sec system glycosylation protein GtfA | Back alignment and domain information |
|---|
Probab=98.22 E-value=0.00092 Score=66.98 Aligned_cols=163 Identities=13% Similarity=0.146 Sum_probs=90.2
Q ss_pred EEEEEeccccccCHHHHHHHHHHHHhC---CCCE-EEEEcCCCCCCCCCCCchhHHHHh-----cCCceeecccchhhhh
Q 012314 271 VVYVSFGSFTILDQVQFQELALGLELC---KRPF-LWVVRPDITTDANDRYPEGFQERV-----AARGQMISWAPQLRVL 341 (466)
Q Consensus 271 ~v~vs~Gs~~~~~~~~~~~~~~a~~~~---~~~~-i~~~~~~~~~~~~~~~~~~~~~~~-----~~n~~~~~~~p~~~ll 341 (466)
.+++..|... +...+..+++|+... ...+ +..+|.+ ...+.+.+.. .+++.+.++.+...++
T Consensus 320 ~~il~vGrl~--~~Kg~~~li~A~~~l~~~~p~~~l~i~G~G-------~~~~~l~~~i~~~~l~~~V~f~G~~~~~~~~ 390 (500)
T TIGR02918 320 FSIITASRLA--KEKHIDWLVKAVVKAKKSVPELTFDIYGEG-------GEKQKLQKIINENQAQDYIHLKGHRNLSEVY 390 (500)
T ss_pred eEEEEEeccc--cccCHHHHHHHHHHHHhhCCCeEEEEEECc-------hhHHHHHHHHHHcCCCCeEEEcCCCCHHHHH
Confidence 5666677653 334555566665332 2223 3344543 1123333221 3567777888878899
Q ss_pred cCCCccccee---ccCC-chhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecC--CCCCcC-HHHHHHHHHHH
Q 012314 342 NHPSIACFLS---HCGW-NSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRD--EGGIIT-REEIKNKVDQV 414 (466)
Q Consensus 342 ~~~~~~~~i~---hgG~-~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~--~~~~~~-~~~l~~~i~~l 414 (466)
..+++ +|. .-|. .+++||+++|+|+|+.... ......+++. .-|..++.. +.+.-+ .++|+++|.++
T Consensus 391 ~~adv--~v~pS~~Egfgl~~lEAma~G~PVI~~dv~---~G~~eiI~~g-~nG~lv~~~~~~~d~~~~~~~la~~I~~l 464 (500)
T TIGR02918 391 KDYEL--YLSASTSEGFGLTLMEAVGSGLGMIGFDVN---YGNPTFIEDN-KNGYLIPIDEEEDDEDQIITALAEKIVEY 464 (500)
T ss_pred HhCCE--EEEcCccccccHHHHHHHHhCCCEEEecCC---CCCHHHccCC-CCEEEEeCCccccchhHHHHHHHHHHHHH
Confidence 88777 664 3343 5889999999999998432 1344555552 568777531 001112 78899999999
Q ss_pred hcCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Q 012314 415 LGNQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVK 453 (466)
Q Consensus 415 l~~~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~ 453 (466)
++++ .++ ++++..++. .+.-+....++++.+.+.
T Consensus 465 l~~~-~~~---~~~~~a~~~-a~~fs~~~v~~~w~~ll~ 498 (500)
T TIGR02918 465 FNSN-DID---AFHEYSYQI-AEGFLTANIIEKWKKLVR 498 (500)
T ss_pred hChH-HHH---HHHHHHHHH-HHhcCHHHHHHHHHHHHh
Confidence 9543 232 233333221 123444555555554443
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. |
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.22 E-value=8.9e-05 Score=72.73 Aligned_cols=111 Identities=17% Similarity=0.174 Sum_probs=75.9
Q ss_pred CCceeecccchhh---hhcCCCcccceeccC----CchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCC
Q 012314 327 ARGQMISWAPQLR---VLNHPSIACFLSHCG----WNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEG 399 (466)
Q Consensus 327 ~n~~~~~~~p~~~---ll~~~~~~~~i~hgG----~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~ 399 (466)
.++.+.+|+++.+ ++..++++++|...- ..+++||+++|+|+|+. |-......+.+. +.|..+.
T Consensus 289 ~~V~f~G~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas----~vgg~~e~i~~~-~~G~l~~---- 359 (407)
T cd04946 289 ISVNFTGELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIAT----NVGGTPEIVDNG-GNGLLLS---- 359 (407)
T ss_pred ceEEEecCCChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeC----CCCCcHHHhcCC-CcEEEeC----
Confidence 4577789999764 555444555765432 46889999999999987 445566677662 4888884
Q ss_pred CCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHH
Q 012314 400 GIITREEIKNKVDQVLGNQDFKARALELKEKAMSSVREGGSSYKTFQNFL 449 (466)
Q Consensus 400 ~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v 449 (466)
..-+.++++++|.++++|++.+++ |++..++.+.+.-+......+++
T Consensus 360 ~~~~~~~la~~I~~ll~~~~~~~~---m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 360 KDPTPNELVSSLSKFIDNEEEYQT---MREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred CCCCHHHHHHHHHHHHhCHHHHHH---HHHHHHHHHHHHcCHHHhHHHhc
Confidence 345789999999999998866553 44444444444566666655554
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. |
| >COG5017 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.22 E-value=1.8e-05 Score=61.36 Aligned_cols=125 Identities=15% Similarity=0.173 Sum_probs=81.1
Q ss_pred EEEEeccccccCHHHHHH--HHHHHHhCCCCEEEEEcCCCCCCCCCCCchhHHHHhcCCc-eee--cccchh-hhhcCCC
Q 012314 272 VYVSFGSFTILDQVQFQE--LALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARG-QMI--SWAPQL-RVLNHPS 345 (466)
Q Consensus 272 v~vs~Gs~~~~~~~~~~~--~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n~-~~~--~~~p~~-~ll~~~~ 345 (466)
++||-||....=.+.+.. +..-.+...-++|+.+|+. +..| -|+ ++. ++-+-. .+-..++
T Consensus 2 ifVTvGstf~~f~rlv~k~e~~el~~~i~e~lIvQyGn~------d~kp--------vagl~v~~F~~~~kiQsli~dar 67 (161)
T COG5017 2 IFVTVGSTFYPFNRLVLKIEVLELTELIQEELIVQYGNG------DIKP--------VAGLRVYGFDKEEKIQSLIHDAR 67 (161)
T ss_pred eEEEecCccchHHHHHhhHHHHHHHHHhhhheeeeecCC------Cccc--------ccccEEEeechHHHHHHHhhcce
Confidence 789999873211222222 3333344456889999876 2222 122 344 444543 4776666
Q ss_pred cccceeccCCchhhhhhhcCcceeeccccc--------chhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHh
Q 012314 346 IACFLSHCGWNSTMEGVSNGIPFLCWPYFG--------DQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVL 415 (466)
Q Consensus 346 ~~~~i~hgG~~s~~eal~~GvP~l~~P~~~--------DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll 415 (466)
+ +|+|+|.||++.++..++|.|++|-.. .|-..|..+++ ++.=....+ .+..-.+-+...+.+++
T Consensus 68 I--VISHaG~GSIL~~~rl~kplIv~pr~s~y~elvDdHQvela~klae-~~~vv~~sp--te~~L~a~l~~s~~~v~ 140 (161)
T COG5017 68 I--VISHAGEGSILLLLRLDKPLIVVPRSSQYQELVDDHQVELALKLAE-INYVVACSP--TELVLQAGLQVSVADVL 140 (161)
T ss_pred E--EEeccCcchHHHHhhcCCcEEEEECchhHHHhhhhHHHHHHHHHHh-cCceEEEcC--CchhhHHhHhhhhhhhc
Confidence 6 999999999999999999999999643 68888999988 688888865 22223344455555555
|
|
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.20 E-value=0.0014 Score=65.73 Aligned_cols=90 Identities=12% Similarity=0.097 Sum_probs=63.1
Q ss_pred cCCceeecccchhhhhcCCCcccceec----cCCchhhhhhhcCcceeecccccchhhhHHHHHHh----h-hceeEeec
Q 012314 326 AARGQMISWAPQLRVLNHPSIACFLSH----CGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDF----W-KVGLKFDR 396 (466)
Q Consensus 326 ~~n~~~~~~~p~~~ll~~~~~~~~i~h----gG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~----~-G~G~~l~~ 396 (466)
.+|+.+.+.....+++..+++ +|.- |-..++.||+++|+|+|+. |.......+.+. + ..|..++
T Consensus 353 ~~~V~f~G~~~v~~~l~~aDv--~vlpS~~Eg~p~~vlEAma~G~PVVat----d~g~~~elv~~~~~~~~g~~G~lv~- 425 (475)
T cd03813 353 EDNVKFTGFQNVKEYLPKLDV--LVLTSISEGQPLVILEAMAAGIPVVAT----DVGSCRELIEGADDEALGPAGEVVP- 425 (475)
T ss_pred CCeEEEcCCccHHHHHHhCCE--EEeCchhhcCChHHHHHHHcCCCEEEC----CCCChHHHhcCCcccccCCceEEEC-
Confidence 367777775555678876666 5533 3356899999999999996 444455555441 0 2687774
Q ss_pred CCCCCcCHHHHHHHHHHHhcCHHHHHHHHH
Q 012314 397 DEGGIITREEIKNKVDQVLGNQDFKARALE 426 (466)
Q Consensus 397 ~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~ 426 (466)
.-+.++++++|.++++|++.++++.+
T Consensus 426 ----~~d~~~la~ai~~ll~~~~~~~~~~~ 451 (475)
T cd03813 426 ----PADPEALARAILRLLKDPELRRAMGE 451 (475)
T ss_pred ----CCCHHHHHHHHHHHhcCHHHHHHHHH
Confidence 35799999999999999876665443
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Probab=98.09 E-value=0.00039 Score=67.34 Aligned_cols=90 Identities=16% Similarity=0.131 Sum_probs=62.3
Q ss_pred cCCceeecccchh-hhhcCCCcccceec--cCCchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCCCCc
Q 012314 326 AARGQMISWAPQL-RVLNHPSIACFLSH--CGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGII 402 (466)
Q Consensus 326 ~~n~~~~~~~p~~-~ll~~~~~~~~i~h--gG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~ 402 (466)
.+++.+.++.++. .++..+++-++.++ |...++.||+++|+|+|+..... .....+.+. ..|..++ .-
T Consensus 260 ~~~v~~~g~~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~---g~~~~v~~~-~~G~lv~-----~~ 330 (372)
T cd04949 260 EDYVFLKGYTRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNY---GPSEIIEDG-ENGYLVP-----KG 330 (372)
T ss_pred cceEEEcCCCCCHHHHHhhhhEEEecccccccChHHHHHHhCCCCEEEecCCC---CcHHHcccC-CCceEeC-----CC
Confidence 3567777776654 58888887444444 33468999999999999974331 234445553 6788874 35
Q ss_pred CHHHHHHHHHHHhcCHHHHHHH
Q 012314 403 TREEIKNKVDQVLGNQDFKARA 424 (466)
Q Consensus 403 ~~~~l~~~i~~ll~~~~~r~~a 424 (466)
+.++++++|.++++|++.++++
T Consensus 331 d~~~la~~i~~ll~~~~~~~~~ 352 (372)
T cd04949 331 DIEALAEAIIELLNDPKLLQKF 352 (372)
T ss_pred cHHHHHHHHHHHHcCHHHHHHH
Confidence 7999999999999987544433
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra |
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
Probab=98.03 E-value=0.02 Score=61.32 Aligned_cols=118 Identities=8% Similarity=0.029 Sum_probs=67.1
Q ss_pred CCceeecccchh---hhhcCCCcccceec---cC-CchhhhhhhcCcceeeccccc--chhhh-------HHHHHHhhhc
Q 012314 327 ARGQMISWAPQL---RVLNHPSIACFLSH---CG-WNSTMEGVSNGIPFLCWPYFG--DQFLN-------ERYICDFWKV 390 (466)
Q Consensus 327 ~n~~~~~~~p~~---~ll~~~~~~~~i~h---gG-~~s~~eal~~GvP~l~~P~~~--DQ~~~-------a~rv~~~~G~ 390 (466)
+++.+....+.. .++..+++ |+.- =| ..+.+||+++|+|.|+....+ |.-.. ++..-. -+-
T Consensus 900 ~rV~f~g~~de~lah~iyaaADi--flmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~-~~t 976 (1036)
T PLN02316 900 DRARLCLTYDEPLSHLIYAGADF--ILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGL-EPN 976 (1036)
T ss_pred CeEEEEecCCHHHHHHHHHhCcE--EEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhcccccccccccccccc-CCc
Confidence 455555333432 47766666 7742 23 347899999999998875432 22111 110000 146
Q ss_pred eeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Q 012314 391 GLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVKT 454 (466)
Q Consensus 391 G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~ 454 (466)
|..++ .-+++.|..+|.+++.+ |.+....+++..+..+...-+-.+...+.++.+..
T Consensus 977 Gflf~-----~~d~~aLa~AL~raL~~--~~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~~LY~~ 1033 (1036)
T PLN02316 977 GFSFD-----GADAAGVDYALNRAISA--WYDGRDWFNSLCKRVMEQDWSWNRPALDYMELYHS 1033 (1036)
T ss_pred eEEeC-----CCCHHHHHHHHHHHHhh--hhhhHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHH
Confidence 88874 45899999999999964 23333344555554443344545555555555443
|
|
| >PRK14099 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=97.98 E-value=0.0078 Score=60.31 Aligned_cols=41 Identities=24% Similarity=0.302 Sum_probs=33.9
Q ss_pred CCCCEEEEEcCC------CccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012314 1 MSRPRVLVMPAP------AQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (466)
Q Consensus 1 m~~~~il~~~~~------~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 41 (466)
|+++||++++.- ..|=-..+-+|.++|+++||+|.++.+..
T Consensus 1 ~~~~~il~v~~E~~p~~k~ggl~dv~~~lp~~l~~~g~~v~v~~P~y 47 (485)
T PRK14099 1 MTPLRVLSVASEIFPLIKTGGLADVAGALPAALKAHGVEVRTLVPGY 47 (485)
T ss_pred CCCcEEEEEEeccccccCCCcHHHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 899999999832 33555678899999999999999999954
|
|
| >PRK10125 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=97.93 E-value=0.0042 Score=60.77 Aligned_cols=114 Identities=11% Similarity=-0.040 Sum_probs=64.9
Q ss_pred EEEEeccccccCHHHHHHHHHHHHhCCCCE-EEEEcCCCCCCCCCCCchhHHHHhcCCceeecccc-h---hhhhcCCCc
Q 012314 272 VYVSFGSFTILDQVQFQELALGLELCKRPF-LWVVRPDITTDANDRYPEGFQERVAARGQMISWAP-Q---LRVLNHPSI 346 (466)
Q Consensus 272 v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p-~---~~ll~~~~~ 346 (466)
+++..|.....+......+++|+..++.++ ++.+|.. . ... .+++...++.. + ..+++.+++
T Consensus 243 ~il~v~~~~~~~~Kg~~~li~A~~~l~~~~~L~ivG~g----~-~~~--------~~~v~~~g~~~~~~~l~~~y~~aDv 309 (405)
T PRK10125 243 KIAVVAHDLRYDGKTDQQLVREMMALGDKIELHTFGKF----S-PFT--------AGNVVNHGFETDKRKLMSALNQMDA 309 (405)
T ss_pred EEEEEEeccccCCccHHHHHHHHHhCCCCeEEEEEcCC----C-ccc--------ccceEEecCcCCHHHHHHHHHhCCE
Confidence 344445422223334577888887766543 3444433 0 000 23444455543 2 345655665
Q ss_pred ccceec----cCCchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHH
Q 012314 347 ACFLSH----CGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKV 411 (466)
Q Consensus 347 ~~~i~h----gG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i 411 (466)
||.- |-..+++||+++|+|+|+....+ ....+.+ +-|..+++ -+.++|++.+
T Consensus 310 --fV~pS~~Egfp~vilEAmA~G~PVVat~~gG----~~Eiv~~--~~G~lv~~-----~d~~~La~~~ 365 (405)
T PRK10125 310 --LVFSSRVDNYPLILCEALSIGVPVIATHSDA----AREVLQK--SGGKTVSE-----EEVLQLAQLS 365 (405)
T ss_pred --EEECCccccCcCHHHHHHHcCCCEEEeCCCC----hHHhEeC--CcEEEECC-----CCHHHHHhcc
Confidence 6652 33568899999999999996654 3333333 67888864 3677888754
|
|
| >PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.91 E-value=7.4e-05 Score=63.65 Aligned_cols=89 Identities=20% Similarity=0.272 Sum_probs=67.0
Q ss_pred cCCceeecccch---hhhhcCCCcccceec----cCCchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCC
Q 012314 326 AARGQMISWAPQ---LRVLNHPSIACFLSH----CGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDE 398 (466)
Q Consensus 326 ~~n~~~~~~~p~---~~ll~~~~~~~~i~h----gG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~ 398 (466)
.+++.+.+++++ ..++..+++ +|+. |...++.||+++|+|+|+. +...+...+.+. +.|..++.
T Consensus 72 ~~~i~~~~~~~~~~l~~~~~~~di--~v~~s~~e~~~~~~~Ea~~~g~pvI~~----~~~~~~e~~~~~-~~g~~~~~-- 142 (172)
T PF00534_consen 72 KENIIFLGYVPDDELDELYKSSDI--FVSPSRNEGFGLSLLEAMACGCPVIAS----DIGGNNEIINDG-VNGFLFDP-- 142 (172)
T ss_dssp GTTEEEEESHSHHHHHHHHHHTSE--EEE-BSSBSS-HHHHHHHHTT-EEEEE----SSTHHHHHSGTT-TSEEEEST--
T ss_pred ccccccccccccccccccccccee--ccccccccccccccccccccccceeec----cccCCceeeccc-cceEEeCC--
Confidence 468888899883 358877777 7765 5567899999999999987 666777777773 67999853
Q ss_pred CCCcCHHHHHHHHHHHhcCHHHHHHHHH
Q 012314 399 GGIITREEIKNKVDQVLGNQDFKARALE 426 (466)
Q Consensus 399 ~~~~~~~~l~~~i~~ll~~~~~r~~a~~ 426 (466)
-+.+++.++|.+++++++.++++.+
T Consensus 143 ---~~~~~l~~~i~~~l~~~~~~~~l~~ 167 (172)
T PF00534_consen 143 ---NDIEELADAIEKLLNDPELRQKLGK 167 (172)
T ss_dssp ---TSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---CCHHHHHHHHHHHHCCHHHHHHHHH
Confidence 3999999999999998866665444
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B .... |
| >PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.90 E-value=0.00067 Score=65.90 Aligned_cols=113 Identities=15% Similarity=0.173 Sum_probs=73.2
Q ss_pred hcCCceeecccchh---hhhcCCCcccceec----cCC-chhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeec
Q 012314 325 VAARGQMISWAPQL---RVLNHPSIACFLSH----CGW-NSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDR 396 (466)
Q Consensus 325 ~~~n~~~~~~~p~~---~ll~~~~~~~~i~h----gG~-~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~ 396 (466)
...++.+.+++|+. .++..+++ +|.. .|. .++.||+++|+|+|+... ..+...+++. ..|..+.
T Consensus 255 l~~~v~~~G~~~~~~l~~~~~~aDv--~v~pS~~~E~f~~~~lEAma~G~PVI~s~~----gg~~Eiv~~~-~~G~~l~- 326 (380)
T PRK15484 255 IGDRCIMLGGQPPEKMHNYYPLADL--VVVPSQVEEAFCMVAVEAMAAGKPVLASTK----GGITEFVLEG-ITGYHLA- 326 (380)
T ss_pred cCCcEEEeCCCCHHHHHHHHHhCCE--EEeCCCCccccccHHHHHHHcCCCEEEeCC----CCcHhhcccC-CceEEEe-
Confidence 35677788999864 46877777 6642 343 567899999999999854 3455556553 5687553
Q ss_pred CCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Q 012314 397 DEGGIITREEIKNKVDQVLGNQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWV 452 (466)
Q Consensus 397 ~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~ 452 (466)
...++++|+++|.++++|++.++ +++..++.+.+.-+-....+++.+.+
T Consensus 327 ---~~~d~~~la~~I~~ll~d~~~~~----~~~~ar~~~~~~fsw~~~a~~~~~~l 375 (380)
T PRK15484 327 ---EPMTSDSIISDINRTLADPELTQ----IAEQAKDFVFSKYSWEGVTQRFEEQI 375 (380)
T ss_pred ---CCCCHHHHHHHHHHHHcCHHHHH----HHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 33579999999999999987533 33333333223444444445554444
|
|
| >PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A | Back alignment and domain information |
|---|
Probab=97.89 E-value=0.00038 Score=67.67 Aligned_cols=148 Identities=16% Similarity=0.167 Sum_probs=84.4
Q ss_pred CCeEEEEEeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchhHHHHh------cCCceeecccchhhh-
Q 012314 268 PSSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERV------AARGQMISWAPQLRV- 340 (466)
Q Consensus 268 ~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~------~~n~~~~~~~p~~~l- 340 (466)
++.++|.+|.......++.++...+.++..+.-.+|...... .-.+.+.+.. ++++.+.++.|+.+.
T Consensus 283 ~d~vvF~~fn~~~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~------~~~~~l~~~~~~~Gv~~~Ri~f~~~~~~~ehl 356 (468)
T PF13844_consen 283 EDAVVFGSFNNLFKISPETLDLWARILKAVPNSRLWLLRFPA------SGEARLRRRFAAHGVDPDRIIFSPVAPREEHL 356 (468)
T ss_dssp SSSEEEEE-S-GGG--HHHHHHHHHHHHHSTTEEEEEEETST------THHHHHHHHHHHTTS-GGGEEEEE---HHHHH
T ss_pred CCceEEEecCccccCCHHHHHHHHHHHHhCCCcEEEEeeCCH------HHHHHHHHHHHHcCCChhhEEEcCCCCHHHHH
Confidence 455999999998888999999999999999998888876441 1112333222 355666677675543
Q ss_pred --hcCCCcccce---eccCCchhhhhhhcCcceeeccccc-chhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHH
Q 012314 341 --LNHPSIACFL---SHCGWNSTMEGVSNGIPFLCWPYFG-DQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQV 414 (466)
Q Consensus 341 --l~~~~~~~~i---~hgG~~s~~eal~~GvP~l~~P~~~-DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~l 414 (466)
+...++ ++ ..+|.+|++|||++|||+|..|-.. =...-+..+.. +|+...+-. +.++-.+.-.++
T Consensus 357 ~~~~~~DI--~LDT~p~nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~-lGl~ElIA~------s~~eYv~~Av~L 427 (468)
T PF13844_consen 357 RRYQLADI--CLDTFPYNGGTTTLDALWMGVPVVTLPGETMASRVGASILRA-LGLPELIAD------SEEEYVEIAVRL 427 (468)
T ss_dssp HHGGG-SE--EE--SSS--SHHHHHHHHHT--EEB---SSGGGSHHHHHHHH-HT-GGGB-S------SHHHHHHHHHHH
T ss_pred HHhhhCCE--EeeCCCCCCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHH-cCCchhcCC------CHHHHHHHHHHH
Confidence 333444 44 4678899999999999999999532 33334445555 688888752 455555555577
Q ss_pred hcCHHHHHHHHHHHHHHHH
Q 012314 415 LGNQDFKARALELKEKAMS 433 (466)
Q Consensus 415 l~~~~~r~~a~~~~~~~~~ 433 (466)
-+|.+++++ +++++++
T Consensus 428 a~D~~~l~~---lR~~Lr~ 443 (468)
T PF13844_consen 428 ATDPERLRA---LRAKLRD 443 (468)
T ss_dssp HH-HHHHHH---HHHHHHH
T ss_pred hCCHHHHHH---HHHHHHH
Confidence 778777664 3444444
|
|
| >PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.021 Score=57.01 Aligned_cols=64 Identities=17% Similarity=0.181 Sum_probs=46.4
Q ss_pred cCCceeecccchh-hhhcCCCccccee---ccC-CchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeec
Q 012314 326 AARGQMISWAPQL-RVLNHPSIACFLS---HCG-WNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDR 396 (466)
Q Consensus 326 ~~n~~~~~~~p~~-~ll~~~~~~~~i~---hgG-~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~ 396 (466)
.+++.+.+|.... .+|..+++ ||. +-| .+++.||+++|+|+|+.. -..+...+.+. ..|..+++
T Consensus 454 ~d~V~FlG~~~Dv~~~LaaADV--fVlPS~~EGfp~vlLEAMA~GlPVVATd----vGG~~EiV~dG-~nG~LVp~ 522 (578)
T PRK15490 454 LERILFVGASRDVGYWLQKMNV--FILFSRYEGLPNVLIEAQMVGVPVISTP----AGGSAECFIEG-VSGFILDD 522 (578)
T ss_pred CCcEEECCChhhHHHHHHhCCE--EEEcccccCccHHHHHHHHhCCCEEEeC----CCCcHHHcccC-CcEEEECC
Confidence 3678888886543 47877777 775 344 468899999999999884 34566667663 77888864
|
|
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.0028 Score=56.14 Aligned_cols=49 Identities=14% Similarity=0.119 Sum_probs=35.3
Q ss_pred cCCceeecccch-h---hhhcCCCcccceeccC----CchhhhhhhcCcceeecccccc
Q 012314 326 AARGQMISWAPQ-L---RVLNHPSIACFLSHCG----WNSTMEGVSNGIPFLCWPYFGD 376 (466)
Q Consensus 326 ~~n~~~~~~~p~-~---~ll~~~~~~~~i~hgG----~~s~~eal~~GvP~l~~P~~~D 376 (466)
..|+.+.++++. . .++..+++ +++-.. .+++.||+++|+|+|+.+..+.
T Consensus 160 ~~~v~~~~~~~~~~~~~~~~~~~di--~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~~ 216 (229)
T cd01635 160 LDRVIFLGGLDPEELLALLLAAADV--FVLPSLREGFGLVVLEAMACGLPVIATDVGGP 216 (229)
T ss_pred cccEEEeCCCCcHHHHHHHhhcCCE--EEecccccCcChHHHHHHhCCCCEEEcCCCCc
Confidence 467778888632 2 34443555 777665 6899999999999999876543
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PRK10017 colanic acid biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.066 Score=52.40 Aligned_cols=210 Identities=12% Similarity=0.112 Sum_probs=110.5
Q ss_pred hccccEEEEcChhhccHHHHhhc---CCcceec-cccCCCCCCCCCCCcc-cCCccchhhhccCCCCeEEEEEecccccc
Q 012314 208 MIAVNFHFCNSTYELESEAFTTF---PELLPIG-PLLASNRLGNTAGYFW-CEDSNCLKWLDQQQPSSVVYVSFGSFTIL 282 (466)
Q Consensus 208 ~~~~~~vl~~s~~~le~~~~~~~---p~v~~VG-pl~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~ 282 (466)
+.+++.|.+....+.+.- ..+. +++..+. |.+.-++.. .. .....+..|+....+++.|.|+.-.....
T Consensus 174 l~~~~~ItvRD~~S~~~L-k~lGv~~~~v~~~aDpAF~L~~~~-----~~~~~~~~~~~~~~~~~~~~~Vgisvr~~~~~ 247 (426)
T PRK10017 174 FGHCDALILRESVSLDLM-KRSNITTAKVEHGVDTAWLVDHHT-----EDFTASYAVQHWLDVAAQQKTVAITLRELAPF 247 (426)
T ss_pred HhcCCEEEEccHHHHHHH-HHhCCCccceEEecChhhhCCccc-----cccccchhhhhhhcccccCCEEEEEecccccc
Confidence 457788888877776654 3331 3333322 222211110 00 00011223444333455788876533211
Q ss_pred ------C-HHH---HHHHHHHHHhCCCCEEEEEcCC-CCC-CCCCC-CchhHHHHhc--CCceee--cccchh--hhhcC
Q 012314 283 ------D-QVQ---FQELALGLELCKRPFLWVVRPD-ITT-DANDR-YPEGFQERVA--ARGQMI--SWAPQL--RVLNH 343 (466)
Q Consensus 283 ------~-~~~---~~~~~~a~~~~~~~~i~~~~~~-~~~-~~~~~-~~~~~~~~~~--~n~~~~--~~~p~~--~ll~~ 343 (466)
. .+. +..+++.+...|+++++.---. .+. ...+. .-..+.+.+. ++..++ ++-|.. .++++
T Consensus 248 ~~~~~~~~~~Y~~~la~~i~~Li~~g~~Vv~lp~~~~~~~~~~dD~~~~~~l~~~~~~~~~~~vi~~~~~~~e~~~iIs~ 327 (426)
T PRK10017 248 DKRLGTTQQAYEKAFAGVVNRIIDEGYQVIALSTCTGIDSYNKDDRMVALNLRQHVSDPARYHVVMDELNDLEMGKILGA 327 (426)
T ss_pred cccccccHHHHHHHHHHHHHHHHHCCCeEEEEecccCccCCCCchHHHHHHHHHhcccccceeEecCCCChHHHHHHHhh
Confidence 1 222 3344455555588877654211 000 00000 0123333433 233333 333443 68866
Q ss_pred CCcccceeccCCchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeE-eecCCCCCcCHHHHHHHHHHHhcCH-HHH
Q 012314 344 PSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLK-FDRDEGGIITREEIKNKVDQVLGNQ-DFK 421 (466)
Q Consensus 344 ~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~-l~~~~~~~~~~~~l~~~i~~ll~~~-~~r 421 (466)
+++ +|..= .=+..-|+.+|+|+++++. | +....-+.+ +|.... .+. +.++.++|.+.+.++++|. .++
T Consensus 328 ~dl--~ig~R-lHa~I~a~~~gvP~i~i~Y--~-~K~~~~~~~-lg~~~~~~~~---~~l~~~~Li~~v~~~~~~r~~~~ 397 (426)
T PRK10017 328 CEL--TVGTR-LHSAIISMNFGTPAIAINY--E-HKSAGIMQQ-LGLPEMAIDI---RHLLDGSLQAMVADTLGQLPALN 397 (426)
T ss_pred CCE--EEEec-chHHHHHHHcCCCEEEeee--h-HHHHHHHHH-cCCccEEech---hhCCHHHHHHHHHHHHhCHHHHH
Confidence 665 88732 2257788999999999986 3 333444466 688877 443 7889999999999999875 567
Q ss_pred HHHHHHHHHHHH
Q 012314 422 ARALELKEKAMS 433 (466)
Q Consensus 422 ~~a~~~~~~~~~ 433 (466)
++.++--++++.
T Consensus 398 ~~l~~~v~~~r~ 409 (426)
T PRK10017 398 ARLAEAVSRERQ 409 (426)
T ss_pred HHHHHHHHHHHH
Confidence 666655555554
|
|
| >TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.0083 Score=56.75 Aligned_cols=135 Identities=12% Similarity=0.060 Sum_probs=77.7
Q ss_pred CCeEEEEEeccc---cccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchhHHHHhcCCceeecc--cch-hhhh
Q 012314 268 PSSVVYVSFGSF---TILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISW--APQ-LRVL 341 (466)
Q Consensus 268 ~~~~v~vs~Gs~---~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~--~p~-~~ll 341 (466)
+++.|.+..|+. ..++.+.+.++++.+.+.++++++..++. .+....+.+.+..+ +..+.+- +++ ..++
T Consensus 178 ~~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~~~~~vl~~g~~----~e~~~~~~i~~~~~-~~~l~g~~sL~el~ali 252 (319)
T TIGR02193 178 PAPYAVLLHATSRDDKTWPEERWRELARLLLARGLQIVLPWGND----AEKQRAERIAEALP-GAVVLPKMSLAEVAALL 252 (319)
T ss_pred CCCEEEEEeCCCcccCCCCHHHHHHHHHHHHHCCCeEEEeCCCH----HHHHHHHHHHhhCC-CCeecCCCCHHHHHHHH
Confidence 345676667754 45778888899888876677777665533 11111222332222 2233333 333 3588
Q ss_pred cCCCcccceeccCCchhhhhhhcCcceeecccccchhhhHHHHHHhhhcee-EeecCCCCCcCHHHHHHHHHHHh
Q 012314 342 NHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGL-KFDRDEGGIITREEIKNKVDQVL 415 (466)
Q Consensus 342 ~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~-~l~~~~~~~~~~~~l~~~i~~ll 415 (466)
+++++ +|+. -.|.+.=|.+.|+|+|++=-.. +..+-.= +|-.. .+....-..++++++.+++.++|
T Consensus 253 ~~a~l--~I~~-DSgp~HlAaa~g~P~i~lfg~t----~p~~~~P-~~~~~~~~~~~~~~~I~~~~V~~ai~~~~ 319 (319)
T TIGR02193 253 AGADA--VVGV-DTGLTHLAAALDKPTVTLYGAT----DPGRTGG-YGKPNVALLGESGANPTPDEVLAALEELL 319 (319)
T ss_pred HcCCE--EEeC-CChHHHHHHHcCCCEEEEECCC----CHhhccc-CCCCceEEccCccCCCCHHHHHHHHHhhC
Confidence 77776 8887 5678888999999999862111 1111111 12111 11111137899999999998875
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.00096 Score=54.14 Aligned_cols=80 Identities=16% Similarity=0.266 Sum_probs=49.6
Q ss_pred cCCceeecccchh-hhhcCCCcccceec--cC-CchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCCCC
Q 012314 326 AARGQMISWAPQL-RVLNHPSIACFLSH--CG-WNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGI 401 (466)
Q Consensus 326 ~~n~~~~~~~p~~-~ll~~~~~~~~i~h--gG-~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~ 401 (466)
.+|+.+.+|++.. ++++.+++.+..+. .| .+++.|++++|+|+|+.+. .....++. .+.|..+. +
T Consensus 52 ~~~v~~~g~~~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~-----~~~~~~~~-~~~~~~~~----~- 120 (135)
T PF13692_consen 52 RPNVRFHGFVEELPEILAAADVGLIPSRFNEGFPNKLLEAMAAGKPVIASDN-----GAEGIVEE-DGCGVLVA----N- 120 (135)
T ss_dssp HCTEEEE-S-HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHH-----HCHCHS----SEEEE-T----T-
T ss_pred CCCEEEcCCHHHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhCCCEEECCc-----chhhheee-cCCeEEEC----C-
Confidence 5799999998743 58888888555442 22 4789999999999999865 12223333 37887773 2
Q ss_pred cCHHHHHHHHHHHhcC
Q 012314 402 ITREEIKNKVDQVLGN 417 (466)
Q Consensus 402 ~~~~~l~~~i~~ll~~ 417 (466)
+++++.++|.++++|
T Consensus 121 -~~~~l~~~i~~l~~d 135 (135)
T PF13692_consen 121 -DPEELAEAIERLLND 135 (135)
T ss_dssp --HHHHHHHHHHHHH-
T ss_pred -CHHHHHHHHHHHhcC
Confidence 899999999999865
|
|
| >PRK09814 beta-1,6-galactofuranosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0025 Score=60.74 Aligned_cols=109 Identities=13% Similarity=0.237 Sum_probs=77.5
Q ss_pred hcCCceeecccchhhh---hcCCCcccceec-------cC------CchhhhhhhcCcceeecccccchhhhHHHHHHhh
Q 012314 325 VAARGQMISWAPQLRV---LNHPSIACFLSH-------CG------WNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFW 388 (466)
Q Consensus 325 ~~~n~~~~~~~p~~~l---l~~~~~~~~i~h-------gG------~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~ 388 (466)
..+|+.+.+|+|+.++ |.. +.+++... +. .+-+.+.+++|+|+|+. ++...+..|++.
T Consensus 205 ~~~~V~f~G~~~~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~----~~~~~~~~V~~~- 278 (333)
T PRK09814 205 NSANISYKGWFDPEELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVW----SKAAIADFIVEN- 278 (333)
T ss_pred cCCCeEEecCCCHHHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEEC----CCccHHHHHHhC-
Confidence 3578889999998765 433 22222111 11 12267789999999986 667888899885
Q ss_pred hceeEeecCCCCCcCHHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHH
Q 012314 389 KVGLKFDRDEGGIITREEIKNKVDQVLGNQ--DFKARALELKEKAMSSVREGGSSYKTFQNFLQ 450 (466)
Q Consensus 389 G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~--~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~ 450 (466)
++|..++ +.+++.+++.++..+. .++++++++++++++ |.-....+++++.
T Consensus 279 ~~G~~v~-------~~~el~~~l~~~~~~~~~~m~~n~~~~~~~~~~----g~~~~~~~~~~~~ 331 (333)
T PRK09814 279 GLGFVVD-------SLEELPEIIDNITEEEYQEMVENVKKISKLLRN----GYFTKKALVDAIK 331 (333)
T ss_pred CceEEeC-------CHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhc----chhHHHHHHHHHh
Confidence 9999994 5678999998865322 578999999999987 6655777766654
|
|
| >PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.012 Score=47.90 Aligned_cols=103 Identities=16% Similarity=0.245 Sum_probs=66.3
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCccHHHHHHH
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKLIEK 84 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (466)
||++++.....| ...+++.|.++||+|++++........... .++.++.++.... ....+.
T Consensus 1 KIl~i~~~~~~~---~~~~~~~L~~~g~~V~ii~~~~~~~~~~~~--------~~i~~~~~~~~~k------~~~~~~-- 61 (139)
T PF13477_consen 1 KILLIGNTPSTF---IYNLAKELKKRGYDVHIITPRNDYEKYEII--------EGIKVIRLPSPRK------SPLNYI-- 61 (139)
T ss_pred CEEEEecCcHHH---HHHHHHHHHHCCCEEEEEEcCCCchhhhHh--------CCeEEEEecCCCC------ccHHHH--
Confidence 578888777666 457799999999999999996554333322 5788888753311 111111
Q ss_pred HHHhccHHHHHHHHHHhcCCCCCccEEEeCCCch---hHHHHHHHcC-CceEEecc
Q 012314 85 CLQVMPGKLEELIEEINSREDEKIDCFIADGNIG---WSMEIAKKMN-VRGAVFWP 136 (466)
Q Consensus 85 ~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~---~~~~~A~~lg-iP~v~~~~ 136 (466)
. .. .+..+++. .+||+|.+-.... .+..++...+ +|.+...+
T Consensus 62 --~-~~-~l~k~ik~------~~~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~~h 107 (139)
T PF13477_consen 62 --K-YF-RLRKIIKK------EKPDVIHCHTPSPYGLFAMLAKKLLKNKKVIYTVH 107 (139)
T ss_pred --H-HH-HHHHHhcc------CCCCEEEEecCChHHHHHHHHHHHcCCCCEEEEec
Confidence 1 11 34555555 7899998776443 3445667788 88887543
|
|
| >cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS) | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.079 Score=49.02 Aligned_cols=102 Identities=15% Similarity=0.126 Sum_probs=66.8
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCC--CEEEEEeCCcchHHHHHhhhcCCCCCCCeEEE-ecCCCCCCCCCCccHHHH
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHG--FRVTFVNTDYNHKRVVESLQGKNYLGEQIHLV-SIPDGMEPWEDRNDLGKL 81 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rG--h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 81 (466)
||+++-..+-|++.-+..+.++|+++. -+|++++...+.+.++.. +.++-+ .++.. ..
T Consensus 1 kILii~~~~iGD~i~~~p~l~~Lk~~~P~~~I~~l~~~~~~~l~~~~--------p~id~v~~~~~~----~~------- 61 (279)
T cd03789 1 RILVIRLSWIGDVVLATPLLRALKARYPDARITVLAPPWFAPLLELM--------PEVDRVIVLPKK----HG------- 61 (279)
T ss_pred CEEEEecccHHHHHHHHHHHHHHHHHCCCCEEEEEEChhhHHHHhcC--------CccCEEEEcCCc----cc-------
Confidence 588899899999999999999999974 899999998877766543 233322 22211 00
Q ss_pred HHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEE
Q 012314 82 IEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAV 133 (466)
Q Consensus 82 ~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~ 133 (466)
......+.+++..++. .++|+++.-........++...+++...
T Consensus 62 -----~~~~~~~~~~~~~l~~---~~~D~vi~~~~~~~~~~~~~~~~~~~~~ 105 (279)
T cd03789 62 -----KLGLGARRRLARALRR---RRYDLAIDLQGSLRSALLPFLAGAPRRI 105 (279)
T ss_pred -----ccchHHHHHHHHHHhh---cCCCEEEECCCccHHHHHHHHhCCCeEE
Confidence 0011234455556655 7899999776555444455555665543
|
Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PRK10422 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.086 Score=50.61 Aligned_cols=106 Identities=15% Similarity=0.163 Sum_probs=70.1
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhC--CCEEEEEeCCcchHHHHHhhhcCCCCCCCeEE-EecCCCCCCCCCCccHH
Q 012314 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKH--GFRVTFVNTDYNHKRVVESLQGKNYLGEQIHL-VSIPDGMEPWEDRNDLG 79 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~la~~L~~r--Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 79 (466)
++|||++-..+-|++.-...+.++|+++ +.+|++++.+.+.+.++.. +.++- +.++.. . ...
T Consensus 5 ~~~ILii~~~~iGD~vl~~P~l~~Lk~~~P~a~I~~l~~~~~~~l~~~~--------P~id~vi~~~~~--~----~~~- 69 (352)
T PRK10422 5 FRRILIIKMRFHGDMLLTTPVISSLKKNYPDAKIDVLLYQDTIPILSEN--------PEINALYGIKNK--K----AGA- 69 (352)
T ss_pred CceEEEEEecccCceeeHHHHHHHHHHHCCCCeEEEEeccChHHHhccC--------CCceEEEEeccc--c----ccH-
Confidence 3689999999999999999999999986 7999999998887766543 34432 222211 0 000
Q ss_pred HHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEE
Q 012314 80 KLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAV 133 (466)
Q Consensus 80 ~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~ 133 (466)
... ...+.++++.+++ .++|++|.-........++...|.|..+
T Consensus 70 --~~~-----~~~~~~l~~~lr~---~~yD~vidl~~~~~s~ll~~l~~a~~ri 113 (352)
T PRK10422 70 --SEK-----IKNFFSLIKVLRA---NKYDLIVNLTDQWMVALLVRLLNARVKI 113 (352)
T ss_pred --HHH-----HHHHHHHHHHHhh---CCCCEEEEcccchHHHHHHHHhCCCeEE
Confidence 000 1123455566666 7899999654444455566666777654
|
|
| >TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.073 Score=50.95 Aligned_cols=105 Identities=14% Similarity=0.171 Sum_probs=69.9
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhC--CCEEEEEeCCcchHHHHHhhhcCCCCCCCeE-EEecCCCCCCCCCCccHHHH
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKH--GFRVTFVNTDYNHKRVVESLQGKNYLGEQIH-LVSIPDGMEPWEDRNDLGKL 81 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~r--Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 81 (466)
||+++-..+-|++.-+..+.++|+++ +.+|++++.+.+.+.++.. +.++ ++.++.... ....
T Consensus 1 rILii~~~~iGD~vl~tp~l~~Lk~~~P~a~I~~l~~~~~~~l~~~~--------p~vd~vi~~~~~~~----~~~~--- 65 (344)
T TIGR02201 1 RILLIKLRHHGDMLLTTPVISSLKKNYPDAKIDVLLYQETIPILSEN--------PDINALYGLDRKKA----KAGE--- 65 (344)
T ss_pred CEEEEEeccccceeeHHHHHHHHHHHCCCCEEEEEECcChHHHHhcC--------CCccEEEEeChhhh----cchH---
Confidence 58899999999999999999999985 7999999998887766544 3443 233331100 0000
Q ss_pred HHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEE
Q 012314 82 IEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAV 133 (466)
Q Consensus 82 ~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~ 133 (466)
..+ ..+.+++..+++ .++|++|.-........++...|.|.-+
T Consensus 66 -~~~-----~~~~~l~~~lr~---~~yD~vidl~~~~~s~ll~~l~~a~~ri 108 (344)
T TIGR02201 66 -RKL-----ANQFHLIKVLRA---NRYDLVVNLTDQWMVAILVKLLNARVKI 108 (344)
T ss_pred -HHH-----HHHHHHHHHHHh---CCCCEEEECCcchHHHHHHHhcCCCeEE
Confidence 001 112334555655 7899999665455667788888888654
|
This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II. |
| >PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.14 Score=49.01 Aligned_cols=103 Identities=11% Similarity=0.047 Sum_probs=70.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhC--CCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEe-cCCCCCCCCCCccHHH
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKH--GFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVS-IPDGMEPWEDRNDLGK 80 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~r--Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 80 (466)
|||+++-..+-|++.-...+.++|+++ +.+|++++.+.+.+.++.. +.++-+- ++.. .. . ..
T Consensus 1 mrILii~~~~iGD~il~tP~l~~Lk~~~P~a~I~~l~~~~~~~l~~~~--------P~vd~vi~~~~~--~~--~---~~ 65 (348)
T PRK10916 1 MKILVIGPSWVGDMMMSQSLYRTLKARYPQAIIDVMAPAWCRPLLSRM--------PEVNEAIPMPLG--HG--A---LE 65 (348)
T ss_pred CcEEEEccCcccHHHhHHHHHHHHHHHCCCCeEEEEechhhHHHHhcC--------CccCEEEecccc--cc--h---hh
Confidence 479999999999999999999999985 8999999998877766544 3444322 2211 00 0 00
Q ss_pred HHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEE
Q 012314 81 LIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAV 133 (466)
Q Consensus 81 ~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~ 133 (466)
.....++++.+++ .++|++|.=....-...++...|+|.-+
T Consensus 66 ---------~~~~~~l~~~lr~---~~yD~vidl~~~~~s~~l~~~~~~~~ri 106 (348)
T PRK10916 66 ---------IGERRRLGHSLRE---KRYDRAYVLPNSFKSALVPFFAGIPHRT 106 (348)
T ss_pred ---------hHHHHHHHHHHHh---cCCCEEEECCCcHHHHHHHHHcCCCeEe
Confidence 0123455566666 7899999765455566677777887654
|
|
| >COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.02 Score=56.10 Aligned_cols=134 Identities=15% Similarity=0.181 Sum_probs=89.6
Q ss_pred CCCeEEEEEeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchhHHHHh------cCCceeecccchh--
Q 012314 267 QPSSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERV------AARGQMISWAPQL-- 338 (466)
Q Consensus 267 ~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~------~~n~~~~~~~p~~-- 338 (466)
+++.+||+||+......++.+......++..+-.++|..+++. .+.+.+.+++.. .+..++.+-.|..
T Consensus 427 p~~avVf~c~~n~~K~~pev~~~wmqIL~~vP~Svl~L~~~~~----~~~~~~~l~~la~~~Gv~~eRL~f~p~~~~~~h 502 (620)
T COG3914 427 PEDAVVFCCFNNYFKITPEVFALWMQILSAVPNSVLLLKAGGD----DAEINARLRDLAEREGVDSERLRFLPPAPNEDH 502 (620)
T ss_pred CCCeEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEecCCC----cHHHHHHHHHHHHHcCCChhheeecCCCCCHHH
Confidence 4466999999999888999999999999999999999998752 122333333222 1344455555543
Q ss_pred -hhhcCCCccccee---ccCCchhhhhhhcCcceeecccccchhh--hHHHHHHhhhceeEeecCCCCCcCHHHHHHHHH
Q 012314 339 -RVLNHPSIACFLS---HCGWNSTMEGVSNGIPFLCWPYFGDQFL--NERYICDFWKVGLKFDRDEGGIITREEIKNKVD 412 (466)
Q Consensus 339 -~ll~~~~~~~~i~---hgG~~s~~eal~~GvP~l~~P~~~DQ~~--~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~ 412 (466)
+-++.+++ |+- -||..|..|+|..|||||.. .++|+. |+.-+...+|+-..+-. -..+-+..+|.
T Consensus 503 ~a~~~iADl--vLDTyPY~g~TTa~daLwm~vPVlT~--~G~~FasR~~~si~~~agi~e~vA~-----s~~dYV~~av~ 573 (620)
T COG3914 503 RARYGIADL--VLDTYPYGGHTTASDALWMGVPVLTR--VGEQFASRNGASIATNAGIPELVAD-----SRADYVEKAVA 573 (620)
T ss_pred HHhhchhhe--eeecccCCCccchHHHHHhcCceeee--ccHHHHHhhhHHHHHhcCCchhhcC-----CHHHHHHHHHH
Confidence 44455665 664 89999999999999999987 467765 44444433455555532 23455666664
Q ss_pred H
Q 012314 413 Q 413 (466)
Q Consensus 413 ~ 413 (466)
-
T Consensus 574 ~ 574 (620)
T COG3914 574 F 574 (620)
T ss_pred h
Confidence 3
|
|
| >COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.062 Score=51.13 Aligned_cols=105 Identities=16% Similarity=0.123 Sum_probs=73.7
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCC--CEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCccHHH
Q 012314 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHG--FRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGK 80 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~la~~L~~rG--h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (466)
++||+++-..+-|++.-.+.+-+.|+++. .++++++...+.+.+... +.++-+-.-.. ....
T Consensus 1 ~~kIliir~~~iGD~vlt~p~~~~lk~~~P~a~i~~~~~~~~~~i~~~~--------p~I~~vi~~~~-----~~~~--- 64 (334)
T COG0859 1 MMKILVIRLSKLGDVVLTLPLLRTLKKAYPNAKIDVLVPKGFAPILKLN--------PEIDKVIIIDK-----KKKG--- 64 (334)
T ss_pred CceEEEEeccchhHHHhHHHHHHHHHHHCCCCEEEEEeccchHHHHhcC--------hHhhhhccccc-----cccc---
Confidence 46899999999999999999999999985 999999998887776543 23333221100 0000
Q ss_pred HHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEE
Q 012314 81 LIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAV 133 (466)
Q Consensus 81 ~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~ 133 (466)
.......++.+.+++ .++|+||.=....-...++...++|.-.
T Consensus 65 -------~~~~~~~~l~~~lr~---~~yD~vidl~~~~ksa~l~~~~~~~~r~ 107 (334)
T COG0859 65 -------LGLKERLALLRTLRK---ERYDAVIDLQGLLKSALLALLLGIPFRI 107 (334)
T ss_pred -------cchHHHHHHHHHhhc---cCCCEEEECcccHHHHHHHHHhCCCccc
Confidence 123345556666665 7899999877666677777788888766
|
|
| >PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.042 Score=52.04 Aligned_cols=132 Identities=11% Similarity=0.024 Sum_probs=75.7
Q ss_pred CeEEEEEecc-c--cccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchhHHHHhcCCceeecc--cch-hhhhc
Q 012314 269 SSVVYVSFGS-F--TILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISW--APQ-LRVLN 342 (466)
Q Consensus 269 ~~~v~vs~Gs-~--~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~--~p~-~~ll~ 342 (466)
++.|.+..|+ . ..++.+.+.++++.+...+.++++..++. .+...-+.+.+. .+++.+.+- +.+ ..+++
T Consensus 178 ~~~i~~~~~~s~~~k~Wp~e~~a~li~~l~~~~~~ivl~~G~~----~e~~~~~~i~~~-~~~~~l~g~~sL~elaali~ 252 (322)
T PRK10964 178 GPYLVFLHATTRDDKHWPEAHWRELIGLLAPSGLRIKLPWGAE----HEEQRAKRLAEG-FPYVEVLPKLSLEQVARVLA 252 (322)
T ss_pred CCeEEEEeCCCcccccCCHHHHHHHHHHHHHCCCeEEEeCCCH----HHHHHHHHHHcc-CCcceecCCCCHHHHHHHHH
Confidence 3355444454 3 35788889999988876677776554433 111111222211 123334332 333 35887
Q ss_pred CCCcccceeccCCchhhhhhhcCcceeecccccchhhh------HHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhc
Q 012314 343 HPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLN------ERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLG 416 (466)
Q Consensus 343 ~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~~------a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~ 416 (466)
++++ +|+. -.|.+.=|.+.|+|+|++=-..+...+ ...+. -.+.++ ..++++++.++++++|+
T Consensus 253 ~a~l--~I~n-DSGp~HlA~A~g~p~valfGpt~p~~~~p~~~~~~~~~---~~~~cm-----~~I~~e~V~~~~~~~l~ 321 (322)
T PRK10964 253 GAKA--VVSV-DTGLSHLTAALDRPNITLYGPTDPGLIGGYGKNQHACR---SPGKSM-----ADLSAETVFQKLETLIS 321 (322)
T ss_pred hCCE--EEec-CCcHHHHHHHhCCCEEEEECCCCcccccCCCCCceeec---CCCccc-----ccCCHHHHHHHHHHHhh
Confidence 7777 9987 567889999999999987322222111 11111 011223 57899999999988873
|
|
| >TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.27 Score=46.82 Aligned_cols=102 Identities=16% Similarity=0.114 Sum_probs=67.8
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhC--CCEEEEEeCCcchHHHHHhhhcCCCCCCCeEE-EecCCCCCCCCCCccHHHH
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKH--GFRVTFVNTDYNHKRVVESLQGKNYLGEQIHL-VSIPDGMEPWEDRNDLGKL 81 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~r--Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 81 (466)
||+++-..+-|++.-...+.++|++. +.+|++++.+.+...++.. +.++- +.++.. .. . ..+
T Consensus 1 rILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~~~~--------p~id~v~~~~~~--~~--~---~~~ 65 (334)
T TIGR02195 1 KILVIGPSWVGDMVMAQSLYRLLKKRYPQAVIDVLAPAWCRPLLERM--------PEIRQAIDMPLG--HG--A---LEL 65 (334)
T ss_pred CEEEEccchhHHHHHHHHHHHHHHHHCCCCEEEEEechhhHHHHhcC--------chhceeeecCCc--cc--c---hhh
Confidence 58999999999999999999999986 8999999998776666543 23332 222211 00 0 000
Q ss_pred HHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEE
Q 012314 82 IEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAV 133 (466)
Q Consensus 82 ~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~ 133 (466)
....++++.+++ .++|++|.-........++...|+|.-+
T Consensus 66 ---------~~~~~~~~~lr~---~~yD~vi~l~~~~~s~ll~~~~~~~~ri 105 (334)
T TIGR02195 66 ---------TERRRLGRSLRE---ERYDQAIVLPNSLKSALIPFFAGIPHRT 105 (334)
T ss_pred ---------hHHHHHHHHHhh---cCCCEEEECCCCHHHHHHHHHcCCCcee
Confidence 122345555655 7899999876555566677777887543
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.073 Score=49.72 Aligned_cols=116 Identities=15% Similarity=0.088 Sum_probs=64.2
Q ss_pred CeEEEEEeccc---cccCHHH----HHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchhHHHH----hc--CCceeec--
Q 012314 269 SSVVYVSFGSF---TILDQVQ----FQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQER----VA--ARGQMIS-- 333 (466)
Q Consensus 269 ~~~v~vs~Gs~---~~~~~~~----~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~----~~--~n~~~~~-- 333 (466)
++.+.|-.|.- ..++.+. +..+....+..+..+.++.+.. .|+..++. .. +.+.+.+
T Consensus 146 ~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~~~~~vttSRR--------Tp~~~~~~L~~~~~~~~~~~~~~~~ 217 (311)
T PF06258_consen 146 RPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYGGSLLVTTSRR--------TPPEAEAALRELLKDNPGVYIWDGT 217 (311)
T ss_pred CCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCCCeEEEEcCCC--------CcHHHHHHHHHhhcCCCceEEecCC
Confidence 45666666632 2344543 3344444455565555554433 44443332 22 2232322
Q ss_pred -ccchhhhhcCCCcccceeccCCchhhhhhhcCcceeecccccchhh----hHHHHHHhhhceeEee
Q 012314 334 -WAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFL----NERYICDFWKVGLKFD 395 (466)
Q Consensus 334 -~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~----~a~rv~~~~G~G~~l~ 395 (466)
.=|+..+|..++. .+||---.+-+.||+..|+|+.++|... +.. ....+++ .|+-..+.
T Consensus 218 ~~nPy~~~La~ad~-i~VT~DSvSMvsEA~~tG~pV~v~~l~~-~~~r~~r~~~~L~~-~g~~r~~~ 281 (311)
T PF06258_consen 218 GENPYLGFLAAADA-IVVTEDSVSMVSEAAATGKPVYVLPLPG-RSGRFRRFHQSLEE-RGAVRPFT 281 (311)
T ss_pred CCCcHHHHHHhCCE-EEEcCccHHHHHHHHHcCCCEEEecCCC-cchHHHHHHHHHHH-CCCEEECC
Confidence 2256678877776 3445545577799999999999999876 333 3344555 36666664
|
The function of this family is unknown. |
| >PF06722 DUF1205: Protein of unknown function (DUF1205); InterPro: IPR010610 This entry represents a conserved region of unknown function within bacterial glycosyl transferases | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.0064 Score=45.69 Aligned_cols=52 Identities=13% Similarity=0.133 Sum_probs=42.9
Q ss_pred ccchhhhccCCCCeEEEEEecccccc---CH--HHHHHHHHHHHhCCCCEEEEEcCC
Q 012314 257 SNCLKWLDQQQPSSVVYVSFGSFTIL---DQ--VQFQELALGLELCKRPFLWVVRPD 308 (466)
Q Consensus 257 ~~l~~~~~~~~~~~~v~vs~Gs~~~~---~~--~~~~~~~~a~~~~~~~~i~~~~~~ 308 (466)
..+..|+.+.+.++.|++|+||.... .. ..+..++++++.++.++|......
T Consensus 28 ~~~P~Wl~~~~~RpRVcvT~G~~~~~~~g~~~~~~l~~ll~ala~ldvEvV~a~~~~ 84 (97)
T PF06722_consen 28 AVVPDWLLEPPGRPRVCVTLGTSVRMFFGPGGVPLLRRLLEALAGLDVEVVVALPAA 84 (97)
T ss_dssp EEEEGGGSSSTSSEEEEEEETHHHCHHHSCHHHCHHHHHHHHHHTSSSEEEEEETTC
T ss_pred CCCCcccccCCCCCEEEEEcCCCccccccccchHHHHHHHHHHhhCCcEEEEECCHH
Confidence 34558999988999999999987432 22 479999999999999999999765
|
Many proteins containing this domain are members of the glycosyl transferase family 28 IPR004276 from INTERPRO.; PDB: 3OTH_A 3OTG_A 3OTI_A 3D0R_A 3D0Q_B 2P6P_A 3UYK_A 3UYL_B 3TSA_B 2YJN_A. |
| >PHA01633 putative glycosyl transferase group 1 | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.04 Score=51.95 Aligned_cols=83 Identities=11% Similarity=0.041 Sum_probs=54.1
Q ss_pred cCCceee---cccchh---hhhcCCCcccceec---cC-CchhhhhhhcCcceeeccc------ccch------hhhHHH
Q 012314 326 AARGQMI---SWAPQL---RVLNHPSIACFLSH---CG-WNSTMEGVSNGIPFLCWPY------FGDQ------FLNERY 383 (466)
Q Consensus 326 ~~n~~~~---~~~p~~---~ll~~~~~~~~i~h---gG-~~s~~eal~~GvP~l~~P~------~~DQ------~~~a~r 383 (466)
++++.+. +++++. .++..+++ ||.- -| ..+++||+++|+|+|+.-. .+|+ .++..-
T Consensus 200 ~~~V~f~g~~G~~~~~dl~~~y~~aDi--fV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~ 277 (335)
T PHA01633 200 PANVHFVAEFGHNSREYIFAFYGAMDF--TIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVEE 277 (335)
T ss_pred CCcEEEEecCCCCCHHHHHHHHHhCCE--EEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHHH
Confidence 4677776 455543 57767776 7753 34 4578999999999998733 2232 222222
Q ss_pred HH--HhhhceeEeecCCCCCcCHHHHHHHHHHHhc
Q 012314 384 IC--DFWKVGLKFDRDEGGIITREEIKNKVDQVLG 416 (466)
Q Consensus 384 v~--~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~ 416 (466)
.. + .|.|..+ +..++++++++|.+++.
T Consensus 278 ~~~~~-~g~g~~~-----~~~d~~~la~ai~~~~~ 306 (335)
T PHA01633 278 YYDKE-HGQKWKI-----HKFQIEDMANAIILAFE 306 (335)
T ss_pred hcCcc-cCceeee-----cCCCHHHHHHHHHHHHh
Confidence 22 2 2666666 45799999999999954
|
|
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.13 Score=48.79 Aligned_cols=104 Identities=13% Similarity=0.017 Sum_probs=61.1
Q ss_pred cccchh---hhhcCCCccccee---ccC-CchhhhhhhcCcceeecccccchhhhHHHHHHh------------------
Q 012314 333 SWAPQL---RVLNHPSIACFLS---HCG-WNSTMEGVSNGIPFLCWPYFGDQFLNERYICDF------------------ 387 (466)
Q Consensus 333 ~~~p~~---~ll~~~~~~~~i~---hgG-~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~------------------ 387 (466)
.++|+. .++..+++ +|. ..| ..++.||+++|+|+|+.-..+ ....+.+.
T Consensus 196 ~~v~~~~l~~~y~~aDv--~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg----~~E~i~~~~ng~lv~~~~~~~~~~~~ 269 (331)
T PHA01630 196 TPLPDDDIYSLFAGCDI--LFYPVRGGAFEIPVIEALALGLDVVVTEKGA----WSEWVLSNLDVYWIKSGRKPKLWYTN 269 (331)
T ss_pred ccCCHHHHHHHHHhCCE--EEECCccccCChHHHHHHHcCCCEEEeCCCC----chhhccCCCceEEeeecccccccccC
Confidence 336644 46767776 653 333 457899999999999986432 12222220
Q ss_pred -hhceeEeecCCCCCcCHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Q 012314 388 -WKVGLKFDRDEGGIITREEIKNKVDQVLGN---QDFKARALELKEKAMSSVREGGSSYKTFQNFLQWV 452 (466)
Q Consensus 388 -~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~---~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~ 452 (466)
.++|..+. .+.+++.+++.+++.| ++++++...-++...+ .-+-....+++.+.+
T Consensus 270 ~~~~G~~v~------~~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~----~fs~~~ia~k~~~l~ 328 (331)
T PHA01630 270 PIHVGYFLD------PDIEDAYQKLLEALANWTPEKKKENLEGRAILYRE----NYSYNAIAKMWEKIL 328 (331)
T ss_pred CcccccccC------CCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHH----hCCHHHHHHHHHHHH
Confidence 03455543 2678888889898876 4566555544444433 345455555555544
|
|
| >PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.053 Score=40.48 Aligned_cols=82 Identities=13% Similarity=0.105 Sum_probs=53.5
Q ss_pred ccCCchhhhhhhcCcceeecccccchhhhHHHHHHhhh-ceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 012314 352 HCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWK-VGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALELKEK 430 (466)
Q Consensus 352 hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G-~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~ 430 (466)
+|-..-+.|++++|+|+|+-.. ......+.+ | -++.. + +.+++.++|.++++|++.+++..+-+..
T Consensus 9 ~~~~~r~~E~~a~G~~vi~~~~----~~~~~~~~~--~~~~~~~-----~--~~~el~~~i~~ll~~~~~~~~ia~~a~~ 75 (92)
T PF13524_consen 9 DGPNMRIFEAMACGTPVISDDS----PGLREIFED--GEHIITY-----N--DPEELAEKIEYLLENPEERRRIAKNARE 75 (92)
T ss_pred CCCchHHHHHHHCCCeEEECCh----HHHHHHcCC--CCeEEEE-----C--CHHHHHHHHHHHHCCHHHHHHHHHHHHH
Confidence 4455688999999999998754 444444432 5 33333 3 8999999999999998766644433333
Q ss_pred HHHHHhcCCCcHHHHHHHH
Q 012314 431 AMSSVREGGSSYKTFQNFL 449 (466)
Q Consensus 431 ~~~~~~~~g~~~~~~~~~v 449 (466)
... +.-+....+++++
T Consensus 76 ~v~---~~~t~~~~~~~il 91 (92)
T PF13524_consen 76 RVL---KRHTWEHRAEQIL 91 (92)
T ss_pred HHH---HhCCHHHHHHHHH
Confidence 322 2556566666554
|
|
| >PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.015 Score=48.29 Aligned_cols=98 Identities=19% Similarity=0.270 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCccHHHHHHHHHHhccHHHHHHH
Q 012314 18 IPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKLIEKCLQVMPGKLEELI 97 (466)
Q Consensus 18 ~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll 97 (466)
.-+..|+++|.++||+|++++.......-.. ...++.+..++-..... .. ...... ..+++++
T Consensus 5 ~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~-~~-~~~~~~--------~~~~~~l 67 (160)
T PF13579_consen 5 RYVRELARALAARGHEVTVVTPQPDPEDDEE-------EEDGVRVHRLPLPRRPW-PL-RLLRFL--------RRLRRLL 67 (160)
T ss_dssp HHHHHHHHHHHHTT-EEEEEEE---GGG-SE-------EETTEEEEEE--S-SSS-GG-GHCCHH--------HHHHHHC
T ss_pred HHHHHHHHHHHHCCCEEEEEecCCCCccccc-------ccCCceEEeccCCccch-hh-hhHHHH--------HHHHHHH
Confidence 3468899999999999999998655442211 12467777766221111 00 000011 2233444
Q ss_pred HHHhcCCCCCccEEEeCCCch-hHHHHHH-HcCCceEEecc
Q 012314 98 EEINSREDEKIDCFIADGNIG-WSMEIAK-KMNVRGAVFWP 136 (466)
Q Consensus 98 ~~l~~~~~~~~DlvV~D~~~~-~~~~~A~-~lgiP~v~~~~ 136 (466)
..+. .+||+|.+..... ....+++ ..++|+|....
T Consensus 68 -~~~~---~~~Dvv~~~~~~~~~~~~~~~~~~~~p~v~~~h 104 (160)
T PF13579_consen 68 -AARR---ERPDVVHAHSPTAGLVAALARRRRGIPLVVTVH 104 (160)
T ss_dssp -HHCT------SEEEEEHHHHHHHHHHHHHHHT--EEEE-S
T ss_pred -hhhc---cCCeEEEecccchhHHHHHHHHccCCcEEEEEC
Confidence 1122 7899999887332 3334444 78999998764
|
|
| >COG1817 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=95.90 E-value=1.4 Score=40.39 Aligned_cols=104 Identities=21% Similarity=0.155 Sum_probs=68.5
Q ss_pred CCccCHHHHHHHHHHHHhCCCEEEEEeCCcc--hHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCccHH-HHHHHHHHh
Q 012314 12 PAQGHVIPLLEFSQCLAKHGFRVTFVNTDYN--HKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLG-KLIEKCLQV 88 (466)
Q Consensus 12 ~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 88 (466)
+-.-|+.-+-.+..+|.++||+|.+.+-... .+.+... ++.+..+..- ....+. .+.... .+
T Consensus 8 ~n~~hvhfFk~lI~elekkG~ev~iT~rd~~~v~~LLd~y---------gf~~~~Igk~-----g~~tl~~Kl~~~~-eR 72 (346)
T COG1817 8 GNPPHVHFFKNLIWELEKKGHEVLITCRDFGVVTELLDLY---------GFPYKSIGKH-----GGVTLKEKLLESA-ER 72 (346)
T ss_pred CCcchhhHHHHHHHHHHhCCeEEEEEEeecCcHHHHHHHh---------CCCeEeeccc-----CCccHHHHHHHHH-HH
Confidence 3446788889999999999999999887532 2233333 6777666531 111122 222222 11
Q ss_pred ccHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEEeccch
Q 012314 89 MPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSS 138 (466)
Q Consensus 89 ~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~~~~ 138 (466)
...+.+++.. .+||+.+. -+++.+..+|-.+|+|.+.+.-..
T Consensus 73 -~~~L~ki~~~------~kpdv~i~-~~s~~l~rvafgLg~psIi~~D~e 114 (346)
T COG1817 73 -VYKLSKIIAE------FKPDVAIG-KHSPELPRVAFGLGIPSIIFVDNE 114 (346)
T ss_pred -HHHHHHHHhh------cCCceEee-cCCcchhhHHhhcCCceEEecCCh
Confidence 2234555555 89999999 568889999999999999976443
|
|
| >PRK14098 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.083 Score=53.08 Aligned_cols=164 Identities=17% Similarity=0.072 Sum_probs=87.3
Q ss_pred eEEEEEeccccccCHHHHHHHHHHHH---hCCCCEEEEEcCCCCCCCCCCCchhHH---HHhcCCceeecccchh---hh
Q 012314 270 SVVYVSFGSFTILDQVQFQELALGLE---LCKRPFLWVVRPDITTDANDRYPEGFQ---ERVAARGQMISWAPQL---RV 340 (466)
Q Consensus 270 ~~v~vs~Gs~~~~~~~~~~~~~~a~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~---~~~~~n~~~~~~~p~~---~l 340 (466)
.+++...|... +...+..+++|+. +.+.+++++-.++ ....+.+. ++.+.++.+..+++.. .+
T Consensus 307 ~~~i~~vgRl~--~~KG~d~li~a~~~l~~~~~~lvivG~G~------~~~~~~l~~l~~~~~~~V~~~g~~~~~~~~~~ 378 (489)
T PRK14098 307 TPLVGVIINFD--DFQGAELLAESLEKLVELDIQLVICGSGD------KEYEKRFQDFAEEHPEQVSVQTEFTDAFFHLA 378 (489)
T ss_pred CCEEEEecccc--ccCcHHHHHHHHHHHHhcCcEEEEEeCCC------HHHHHHHHHHHHHCCCCEEEEEecCHHHHHHH
Confidence 35666667653 2223344444443 3355555444322 11112222 2345678787777764 57
Q ss_pred hcCCCcccceecc---CC-chhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHh-
Q 012314 341 LNHPSIACFLSHC---GW-NSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVL- 415 (466)
Q Consensus 341 l~~~~~~~~i~hg---G~-~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll- 415 (466)
++.+++ ++.-. |. .+.+||+++|+|.|+....+-.........+. +.|..++ .-++++|+++|.+++
T Consensus 379 ~a~aDi--~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~~~~-~~G~l~~-----~~d~~~la~ai~~~l~ 450 (489)
T PRK14098 379 IAGLDM--LLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSEDK-GSGFIFH-----DYTPEALVAKLGEALA 450 (489)
T ss_pred HHhCCE--EEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeecCCCCC-CceeEeC-----CCCHHHHHHHHHHHHH
Confidence 877776 66432 32 36789999999988876543111110111122 6788884 357899999999876
Q ss_pred --cCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHh
Q 012314 416 --GNQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVKTN 455 (466)
Q Consensus 416 --~~~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~ 455 (466)
.|++..+ ++.+ +++...-+-....++.++.+.+.
T Consensus 451 ~~~~~~~~~---~~~~---~~~~~~fsw~~~a~~y~~lY~~~ 486 (489)
T PRK14098 451 LYHDEERWE---ELVL---EAMERDFSWKNSAEEYAQLYREL 486 (489)
T ss_pred HHcCHHHHH---HHHH---HHhcCCCChHHHHHHHHHHHHHH
Confidence 3443222 2222 22223444456666666555443
|
|
| >KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.41 Score=47.00 Aligned_cols=62 Identities=16% Similarity=0.208 Sum_probs=48.3
Q ss_pred hhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHH
Q 012314 357 STMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALE 426 (466)
Q Consensus 357 s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~ 426 (466)
++.||+++|+|++++ ++..-+..++. .--|...++ ..-....+++++.++..|++++.++.+
T Consensus 381 v~IEAMa~glPvvAt----~~GGP~EiV~~-~~tG~l~dp---~~e~~~~~a~~~~kl~~~p~l~~~~~~ 442 (495)
T KOG0853|consen 381 VPIEAMACGLPVVAT----NNGGPAEIVVH-GVTGLLIDP---GQEAVAELADALLKLRRDPELWARMGK 442 (495)
T ss_pred eeHHHHhcCCCEEEe----cCCCceEEEEc-CCcceeeCC---chHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 679999999999998 67777777776 467777764 333334799999999999998776644
|
|
| >PRK02261 methylaspartate mutase subunit S; Provisional | Back alignment and domain information |
|---|
Probab=95.14 E-value=0.53 Score=38.08 Aligned_cols=49 Identities=16% Similarity=0.259 Sum_probs=43.2
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHh
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVES 49 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~ 49 (466)
|++.+|++.+.++-+|-.-..-++..|..+|++|+++...-..+.+...
T Consensus 1 ~~~~~vl~~~~~gD~H~lG~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~ 49 (137)
T PRK02261 1 MKKKTVVLGVIGADCHAVGNKILDRALTEAGFEVINLGVMTSQEEFIDA 49 (137)
T ss_pred CCCCEEEEEeCCCChhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHH
Confidence 8999999999999999999999999999999999999987655554443
|
|
| >PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria | Back alignment and domain information |
|---|
Probab=95.08 E-value=0.17 Score=42.40 Aligned_cols=94 Identities=11% Similarity=0.105 Sum_probs=56.7
Q ss_pred hCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCccHHHHHHHHHHhccHHHHHHHHHHhcCCCCCc
Q 012314 29 KHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKLIEKCLQVMPGKLEELIEEINSREDEKI 108 (466)
Q Consensus 29 ~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~ 108 (466)
++||+|++++........ ++++.+.+...-...........-++.-...... +.+.+..|++.+ ..|
T Consensus 1 q~gh~v~fl~~~~~~~~~-----------~GV~~~~y~~~~~~~~~~~~~~~~~e~~~~rg~a-v~~a~~~L~~~G-f~P 67 (171)
T PF12000_consen 1 QRGHEVVFLTERKRPPIP-----------PGVRVVRYRPPRGPTPGTHPYVRDFEAAVLRGQA-VARAARQLRAQG-FVP 67 (171)
T ss_pred CCCCEEEEEecCCCCCCC-----------CCcEEEEeCCCCCCCCCCCcccccHHHHHHHHHH-HHHHHHHHHHcC-CCC
Confidence 589999999965443322 2677777653222222222222223333333333 334444555555 999
Q ss_pred cEEEeCCCchhHHHHHHHc-CCceEEec
Q 012314 109 DCFIADGNIGWSMEIAKKM-NVRGAVFW 135 (466)
Q Consensus 109 DlvV~D~~~~~~~~~A~~l-giP~v~~~ 135 (466)
|+||+-.-.-.++-+-+.+ ++|.+.+.
T Consensus 68 DvI~~H~GWGe~Lflkdv~P~a~li~Y~ 95 (171)
T PF12000_consen 68 DVIIAHPGWGETLFLKDVFPDAPLIGYF 95 (171)
T ss_pred CEEEEcCCcchhhhHHHhCCCCcEEEEE
Confidence 9999997655778888888 89999875
|
This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important. |
| >KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=95.06 E-value=0.49 Score=47.15 Aligned_cols=152 Identities=17% Similarity=0.230 Sum_probs=88.5
Q ss_pred CCCeEEEEEeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchhHHH---Hh---cCCceeecccchh--
Q 012314 267 QPSSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQE---RV---AARGQMISWAPQL-- 338 (466)
Q Consensus 267 ~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~---~~---~~n~~~~~~~p~~-- 338 (466)
+++.+||.+|--.-..+++.++..+..+...+..++|.....-..+ ..|.. +. ++.+.+.+-+...
T Consensus 756 p~d~vvf~~FNqLyKidP~~l~~W~~ILk~VPnS~LwllrfPa~ge------~rf~ty~~~~Gl~p~riifs~va~k~eH 829 (966)
T KOG4626|consen 756 PEDAVVFCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGE------QRFRTYAEQLGLEPDRIIFSPVAAKEEH 829 (966)
T ss_pred CCCeEEEeechhhhcCCHHHHHHHHHHHHhCCcceeEEEeccccch------HHHHHHHHHhCCCccceeeccccchHHH
Confidence 3455899888776667889999999999999999999986441100 22221 11 3444444333322
Q ss_pred ---hhhcCCCcccceeccCCchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHh
Q 012314 339 ---RVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVL 415 (466)
Q Consensus 339 ---~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll 415 (466)
..|..-.++-+.++ |..|.++.|++|+|||.+|.-.--...|.-+--++|+|..+-. +.++-.+.-.++=
T Consensus 830 vrr~~LaDv~LDTplcn-GhTTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~~Gl~hliak------~~eEY~~iaV~La 902 (966)
T KOG4626|consen 830 VRRGQLADVCLDTPLCN-GHTTGMDVLWAGVPMVTMPGETLASRVAASLLTALGLGHLIAK------NREEYVQIAVRLA 902 (966)
T ss_pred HHhhhhhhhcccCcCcC-CcccchhhhccCCceeecccHHHHHHHHHHHHHHcccHHHHhh------hHHHHHHHHHHhh
Confidence 23322222334554 6789999999999999999754333333322223788886642 3333333333444
Q ss_pred cCHHHHHHHHHHHHHHHHH
Q 012314 416 GNQDFKARALELKEKAMSS 434 (466)
Q Consensus 416 ~~~~~r~~a~~~~~~~~~~ 434 (466)
.|.++-+ +++.+++++
T Consensus 903 td~~~L~---~lr~~l~~~ 918 (966)
T KOG4626|consen 903 TDKEYLK---KLRAKLRKA 918 (966)
T ss_pred cCHHHHH---HHHHHHHHH
Confidence 4554444 344455543
|
|
| >TIGR02919 accessory Sec system glycosyltransferase GtfB | Back alignment and domain information |
|---|
Probab=94.40 E-value=1.2 Score=43.90 Aligned_cols=136 Identities=10% Similarity=0.115 Sum_probs=83.7
Q ss_pred CeEEEEEeccccccCHHHHHHHHHHHHhCC-CCEEEEEcCCCCCCCCCCCchhHH--HHhcCCceee-cccc-h-hhhhc
Q 012314 269 SSVVYVSFGSFTILDQVQFQELALGLELCK-RPFLWVVRPDITTDANDRYPEGFQ--ERVAARGQMI-SWAP-Q-LRVLN 342 (466)
Q Consensus 269 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~--~~~~~n~~~~-~~~p-~-~~ll~ 342 (466)
+.++++| +...+..+......++ ..+=+..+..+ .+.+. ++. +|+.+. ++.+ . .+++.
T Consensus 283 ~~~l~~t-------~s~~I~~i~~Lv~~lPd~~f~Iga~te~--------s~kL~~L~~y-~nvvly~~~~~~~l~~ly~ 346 (438)
T TIGR02919 283 KQALILT-------NSDQIEHLEEIVQALPDYHFHIAALTEM--------SSKLMSLDKY-DNVKLYPNITTQKIQELYQ 346 (438)
T ss_pred ccEEEEC-------CHHHHHHHHHHHHhCCCcEEEEEecCcc--------cHHHHHHHhc-CCcEEECCcChHHHHHHHH
Confidence 4477775 3556666666665555 34433333221 12221 233 777766 7777 3 46999
Q ss_pred CCCcccceeccC--CchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCHHH
Q 012314 343 HPSIACFLSHCG--WNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDF 420 (466)
Q Consensus 343 ~~~~~~~i~hgG--~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~ 420 (466)
.|++=+-|+||. ..++.||+.+|+|+++.=. ..--..+.. . |-... .-+.+++.++|.++|.+++-
T Consensus 347 ~~dlyLdin~~e~~~~al~eA~~~G~pI~afd~----t~~~~~~i~--~-g~l~~-----~~~~~~m~~~i~~lL~d~~~ 414 (438)
T TIGR02919 347 TCDIYLDINHGNEILNAVRRAFEYNLLILGFEE----TAHNRDFIA--S-ENIFE-----HNEVDQLISKLKDLLNDPNQ 414 (438)
T ss_pred hccEEEEccccccHHHHHHHHHHcCCcEEEEec----ccCCccccc--C-Cceec-----CCCHHHHHHHHHHHhcCHHH
Confidence 999977888876 4799999999999998833 221111111 1 44553 34689999999999999854
Q ss_pred HHHHHHHHHHHH
Q 012314 421 KARALELKEKAM 432 (466)
Q Consensus 421 r~~a~~~~~~~~ 432 (466)
.+.+...+++..
T Consensus 415 ~~~~~~~q~~~a 426 (438)
T TIGR02919 415 FRELLEQQREHA 426 (438)
T ss_pred HHHHHHHHHHHh
Confidence 444444444443
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. |
| >PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [] | Back alignment and domain information |
|---|
Probab=94.36 E-value=0.33 Score=40.90 Aligned_cols=114 Identities=14% Similarity=0.156 Sum_probs=58.6
Q ss_pred EcCCCccCHHHHHHHHHHH-HhC-CCEEEEEeCCcchHH--HHHhhhcCCCCCCCeEEEecCCCCCCCCCCccHHHHHHH
Q 012314 9 MPAPAQGHVIPLLEFSQCL-AKH-GFRVTFVNTDYNHKR--VVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKLIEK 84 (466)
Q Consensus 9 ~~~~~~GH~~p~l~la~~L-~~r-Gh~Vt~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (466)
+..+++||..=|+.|.+.+ .++ .++..+++....... +.+.... .....++..+|....-. ... ...
T Consensus 3 ~v~gsGGHt~eml~L~~~~~~~~~~~~~~ivt~~d~~S~~k~~~~~~~---~~~~~~~~~~~r~r~v~---q~~---~~~ 73 (170)
T PF08660_consen 3 VVLGSGGHTAEMLRLLKALDNDRYQPRTYIVTEGDKQSRSKAEQLEKS---SSKRHKILEIPRAREVG---QSY---LTS 73 (170)
T ss_pred EEEcCcHHHHHHHHHHHHhhhhcCCCcEEEEEcCCcccHHHHHHHHHh---ccccceeeccceEEEec---hhh---Hhh
Confidence 4458889999999999999 333 466666666543332 2211110 00111344444211111 000 111
Q ss_pred HHHhccHHHHHHHHHHhcCCCCCccEEEeCCCch--hHHHHHHHc------CCceEEec
Q 012314 85 CLQVMPGKLEELIEEINSREDEKIDCFIADGNIG--WSMEIAKKM------NVRGAVFW 135 (466)
Q Consensus 85 ~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~--~~~~~A~~l------giP~v~~~ 135 (466)
..+.... +-..+..+.+ .+||+||+..-.. ..+.+|..+ |.+.|.+-
T Consensus 74 ~~~~l~~-~~~~~~il~r---~rPdvii~nGpg~~vp~~~~~~l~~~~~~~~~kiIyIE 128 (170)
T PF08660_consen 74 IFTTLRA-FLQSLRILRR---ERPDVIISNGPGTCVPVCLAAKLLRLLGLRGSKIIYIE 128 (170)
T ss_pred HHHHHHH-HHHHHHHHHH---hCCCEEEEcCCceeeHHHHHHHHHHHhhccCCcEEEEE
Confidence 1111111 1111222222 6899999998555 566678888 88888753
|
|
| >KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=94.09 E-value=5.1 Score=37.37 Aligned_cols=347 Identities=11% Similarity=0.104 Sum_probs=172.4
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcch--HHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCc-cH
Q 012314 2 SRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNH--KRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRN-DL 78 (466)
Q Consensus 2 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 78 (466)
++.|++++..+.-||--+|.-=|..|++.|.+|.++...... +.+-.. ++++++.++..- ...... -.
T Consensus 11 ~k~ra~vvVLGDvGRSPRMqYHA~Sla~~gf~VdliGy~~s~p~e~l~~h--------prI~ih~m~~l~-~~~~~p~~~ 81 (444)
T KOG2941|consen 11 KKKRAIVVVLGDVGRSPRMQYHALSLAKLGFQVDLIGYVESIPLEELLNH--------PRIRIHGMPNLP-FLQGGPRVL 81 (444)
T ss_pred ccceEEEEEecccCCChHHHHHHHHHHHcCCeEEEEEecCCCChHHHhcC--------CceEEEeCCCCc-ccCCCchhh
Confidence 356889999999999999999999999999999999875432 222222 689999987422 111111 11
Q ss_pred HHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCC-chhHHH----HHHHcCCceEEeccchhHHHHHHhhcccccc
Q 012314 79 GKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGN-IGWSME----IAKKMNVRGAVFWPSSAASVALVFRIPKLID 153 (466)
Q Consensus 79 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~-~~~~~~----~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~ 153 (466)
...++.+... ...+..++.. .++|.++.-.= ...... ...-.|...++=|+...+.........
T Consensus 82 ~l~lKvf~Qf-l~Ll~aL~~~------~~~~~ilvQNPP~iPtliv~~~~~~l~~~KfiIDWHNy~Ysl~l~~~~g---- 150 (444)
T KOG2941|consen 82 FLPLKVFWQF-LSLLWALFVL------RPPDIILVQNPPSIPTLIVCVLYSILTGAKFIIDWHNYGYSLQLKLKLG---- 150 (444)
T ss_pred hhHHHHHHHH-HHHHHHHHhc------cCCcEEEEeCCCCCchHHHHHHHHHHhcceEEEEehhhHHHHHHHhhcC----
Confidence 1222333222 2223344443 67899887651 112222 234446777777766655311111100
Q ss_pred cCccCCCCCCCccccccccCCCCCCCcccccccccCCCCchhHH-HHHHHHH-Hhhhc-cccEEEEcChhhccHHHHhh-
Q 012314 154 DGIIDSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIF-FDLLERN-TRAMI-AVNFHFCNSTYELESEAFTT- 229 (466)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~-~~~~vl~~s~~~le~~~~~~- 229 (466)
...++..+ ......++......+.. .+-+.+. .+... ....+++.-.|+-+.+ ..-
T Consensus 151 -----------~~h~lV~l--------~~~~E~~fgk~a~~nLcVT~AMr~dL~qnWgi~ra~v~YDrPps~~~~-l~~~ 210 (444)
T KOG2941|consen 151 -----------FQHPLVRL--------VRWLEKYFGKLADYNLCVTKAMREDLIQNWGINRAKVLYDRPPSKPTP-LDEQ 210 (444)
T ss_pred -----------CCCchHHH--------HHHHHHHhhcccccchhhHHHHHHHHHHhcCCceeEEEecCCCCCCCc-hhHH
Confidence 00000000 00000111111111110 0111111 11111 1334555555541100 000
Q ss_pred cCCcceeccc----cCCCCCCCCCCCcccCCccchhhhc--------cCCCCeEEEEEeccccccCHHHHHHHHHHHHhC
Q 012314 230 FPELLPIGPL----LASNRLGNTAGYFWCEDSNCLKWLD--------QQQPSSVVYVSFGSFTILDQVQFQELALGLELC 297 (466)
Q Consensus 230 ~p~v~~VGpl----~~~~~~~~~~~~~~~~~~~l~~~~~--------~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~ 297 (466)
-.-+..+|.- ..+..+. ...+. ..|+. ..++++.++||-- +..+++.+..+++|+..-
T Consensus 211 H~lf~~l~~d~~~f~ar~~q~------~~~~~--taf~~k~~s~~v~~~~~~pallvsST--swTpDEdf~ILL~AL~~y 280 (444)
T KOG2941|consen 211 HELFMKLAGDHSPFRAREPQD------KALER--TAFTKKDASGDVQLLPERPALLVSST--SWTPDEDFGILLEALVIY 280 (444)
T ss_pred HHHHhhhccccchhhhccccc------chhhh--hhHhhhcccchhhhccCCCeEEEecC--CCCCcccHHHHHHHHHhh
Confidence 0001123322 2221111 00110 01111 1245678888643 455777788888887521
Q ss_pred ---------CC-CEEEEEcCCCCCCCCCCCchhHHHHhc----CCceee-cccc---hhhhhcCCCcccceeccCCc---
Q 012314 298 ---------KR-PFLWVVRPDITTDANDRYPEGFQERVA----ARGQMI-SWAP---QLRVLNHPSIACFLSHCGWN--- 356 (466)
Q Consensus 298 ---------~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~----~n~~~~-~~~p---~~~ll~~~~~~~~i~hgG~~--- 356 (466)
+. .++.++.+. .++.+.+..... .++.+. .|+. +..+|+.++++..+|-...|
T Consensus 281 ~~~~~~~~~~lP~llciITGK------GPlkE~Y~~~I~~~~~~~v~~~tpWL~aEDYP~ll~saDlGVcLHtSSSGLDL 354 (444)
T KOG2941|consen 281 EEQLYDKTHNLPSLLCIITGK------GPLKEKYSQEIHEKNLQHVQVCTPWLEAEDYPKLLASADLGVCLHTSSSGLDL 354 (444)
T ss_pred hhhhhhccCCCCcEEEEEcCC------CchhHHHHHHHHHhcccceeeeecccccccchhHhhccccceEeeecCcccCc
Confidence 22 344444433 245555444332 455554 7764 56799888887777654443
Q ss_pred --hhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhc
Q 012314 357 --STMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLG 416 (466)
Q Consensus 357 --s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~ 416 (466)
-|..-.=+|+|++++- =.-.-+-|.+. --|.... +.++|++.+..++.
T Consensus 355 PMKVVDMFGcglPvcA~~----fkcl~ELVkh~-eNGlvF~-------Ds~eLa~ql~~lf~ 404 (444)
T KOG2941|consen 355 PMKVVDMFGCGLPVCAVN----FKCLDELVKHG-ENGLVFE-------DSEELAEQLQMLFK 404 (444)
T ss_pred chhHHHhhcCCCceeeec----chhHHHHHhcC-CCceEec-------cHHHHHHHHHHHHh
Confidence 2445566889998873 33444555553 5677774 68999999999987
|
|
| >COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=93.84 E-value=4.6 Score=36.07 Aligned_cols=75 Identities=20% Similarity=0.248 Sum_probs=47.4
Q ss_pred HHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchhHHHHhcCC-----cee-----ecccchhhhhcCCCcccceeccC-C
Q 012314 287 FQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAAR-----GQM-----ISWAPQLRVLNHPSIACFLSHCG-W 355 (466)
Q Consensus 287 ~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n-----~~~-----~~~~p~~~ll~~~~~~~~i~hgG-~ 355 (466)
...+...+++.|..++++.+.. .|+.....+..| +.+ .++=|+-++|+-++. +|.-.. .
T Consensus 186 ~~~l~k~l~~~g~~~lisfSRR--------Tp~~~~s~l~~~l~s~~~i~w~~~d~g~NPY~~~La~Ady--ii~TaDSi 255 (329)
T COG3660 186 ASLLVKILENQGGSFLISFSRR--------TPDTVKSILKNNLNSSPGIVWNNEDTGYNPYIDMLAAADY--IISTADSI 255 (329)
T ss_pred HHHHHHHHHhCCceEEEEeecC--------CcHHHHHHHHhccccCceeEeCCCCCCCCchHHHHhhcce--EEEecchh
Confidence 4445666788899998888655 233322222221 112 145588899955554 776655 4
Q ss_pred chhhhhhhcCcceeec
Q 012314 356 NSTMEGVSNGIPFLCW 371 (466)
Q Consensus 356 ~s~~eal~~GvP~l~~ 371 (466)
|-.+||++.|+|+.+.
T Consensus 256 nM~sEAasTgkPv~~~ 271 (329)
T COG3660 256 NMCSEAASTGKPVFIL 271 (329)
T ss_pred hhhHHHhccCCCeEEE
Confidence 6779999999999554
|
|
| >PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family | Back alignment and domain information |
|---|
Probab=93.70 E-value=0.15 Score=44.07 Aligned_cols=43 Identities=16% Similarity=0.201 Sum_probs=30.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHH
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVV 47 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~ 47 (466)
||||+.-=-|. +---+.+|+++|.+.||+|+++.+...+....
T Consensus 1 M~ILlTNDDGi-~a~Gi~aL~~~L~~~g~~V~VvAP~~~~Sg~g 43 (196)
T PF01975_consen 1 MRILLTNDDGI-DAPGIRALAKALSALGHDVVVVAPDSEQSGTG 43 (196)
T ss_dssp SEEEEE-SS-T-TSHHHHHHHHHHTTTSSEEEEEEESSSTTTST
T ss_pred CeEEEEcCCCC-CCHHHHHHHHHHHhcCCeEEEEeCCCCCcCcc
Confidence 45665553344 33448899999988889999999988776553
|
This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A .... |
| >TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 | Back alignment and domain information |
|---|
Probab=93.58 E-value=0.67 Score=46.78 Aligned_cols=87 Identities=20% Similarity=0.279 Sum_probs=60.4
Q ss_pred CCceeecccc--h-hhhhcCCCcccceecc---CCchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCCC
Q 012314 327 ARGQMISWAP--Q-LRVLNHPSIACFLSHC---GWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGG 400 (466)
Q Consensus 327 ~n~~~~~~~p--~-~~ll~~~~~~~~i~hg---G~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~ 400 (466)
..+.+.++.+ + ...+..+++ +|.=+ |.++..||+.+|+|+| .......|++ -.=|..+.
T Consensus 409 ~~v~f~gy~~e~dl~~~~~~arl--~id~s~~eg~~~~ieAiS~GiPqI-------nyg~~~~V~d-~~NG~li~----- 473 (519)
T TIGR03713 409 ERIAFTTLTNEEDLISALDKLRL--IIDLSKEPDLYTQISGISAGIPQI-------NKVETDYVEH-NKNGYIID----- 473 (519)
T ss_pred cEEEEEecCCHHHHHHHHhhheE--EEECCCCCChHHHHHHHHcCCCee-------ecCCceeeEc-CCCcEEeC-----
Confidence 3556667777 3 357766666 77644 6679999999999999 3334445555 36677773
Q ss_pred CcCHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 012314 401 IITREEIKNKVDQVLGNQDFKARALELKEK 430 (466)
Q Consensus 401 ~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~ 430 (466)
+.++|.++|..+|.+.+-.+++..-+-+
T Consensus 474 --d~~~l~~al~~~L~~~~~wn~~~~~sy~ 501 (519)
T TIGR03713 474 --DISELLKALDYYLDNLKNWNYSLAYSIK 501 (519)
T ss_pred --CHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 6899999999999998655544443333
|
This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A | Back alignment and domain information |
|---|
Probab=93.41 E-value=1 Score=37.65 Aligned_cols=102 Identities=19% Similarity=0.186 Sum_probs=51.9
Q ss_pred CccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCccHHHHHHHHHHhccHH
Q 012314 13 AQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKLIEKCLQVMPGK 92 (466)
Q Consensus 13 ~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (466)
.+|=-.-+..++++|+++||+|++++......... . ....... ....... .. ...+. ....
T Consensus 11 ~GG~e~~~~~l~~~l~~~G~~v~v~~~~~~~~~~~-----------~-~~~~~~~-~~~~~~~-~~---~~~~~--~~~~ 71 (177)
T PF13439_consen 11 IGGAERVVLNLARALAKRGHEVTVVSPGVKDPIEE-----------E-LVKIFVK-IPYPIRK-RF---LRSFF--FMRR 71 (177)
T ss_dssp SSHHHHHHHHHHHHHHHTT-EEEEEESS-TTS-SS-----------T-EEEE----TT-SSTS-S-----HHHH--HHHH
T ss_pred CChHHHHHHHHHHHHHHCCCEEEEEEcCCCccchh-----------h-ccceeee-eeccccc-cc---chhHH--HHHH
Confidence 44666779999999999999999998864433221 1 1111110 0000001 11 11111 1234
Q ss_pred HHHHHHHHhcCCCCCccEEEeCCCch-hHHHHHHHcCCceEEeccchhH
Q 012314 93 LEELIEEINSREDEKIDCFIADGNIG-WSMEIAKKMNVRGAVFWPSSAA 140 (466)
Q Consensus 93 ~~~ll~~l~~~~~~~~DlvV~D~~~~-~~~~~A~~lgiP~v~~~~~~~~ 140 (466)
+.+++++ .++|+|-+-.... +...++.. ++|.+.+.+....
T Consensus 72 ~~~~i~~------~~~DiVh~~~~~~~~~~~~~~~-~~~~v~~~H~~~~ 113 (177)
T PF13439_consen 72 LRRLIKK------EKPDIVHIHGPPAFWIALLACR-KVPIVYTIHGPYF 113 (177)
T ss_dssp HHHHHHH------HT-SEEECCTTHCCCHHHHHHH-CSCEEEEE-HHH-
T ss_pred HHHHHHH------cCCCeEEecccchhHHHHHhcc-CCCEEEEeCCCcc
Confidence 5666666 6799995554333 33333333 9999998766653
|
|
| >PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long) | Back alignment and domain information |
|---|
Probab=92.64 E-value=2.5 Score=39.48 Aligned_cols=82 Identities=12% Similarity=0.090 Sum_probs=64.2
Q ss_pred CCcee-ecccch---hhhhcCCCccccee--ccCCchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCCC
Q 012314 327 ARGQM-ISWAPQ---LRVLNHPSIACFLS--HCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGG 400 (466)
Q Consensus 327 ~n~~~-~~~~p~---~~ll~~~~~~~~i~--hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~ 400 (466)
+|+.+ .+++|. ..+|+.+++..|.+ .=|.|+++-.|+.|+|++.- .+...-.-+++ .|+=+... .+
T Consensus 245 ~~~~iL~e~mpf~eYl~lL~~cDl~if~~~RQQgiGnI~lLl~~G~~v~L~----~~np~~~~l~~-~~ipVlf~---~d 316 (360)
T PF07429_consen 245 ENFQILTEFMPFDEYLALLSRCDLGIFNHNRQQGIGNICLLLQLGKKVFLS----RDNPFWQDLKE-QGIPVLFY---GD 316 (360)
T ss_pred cceeEhhhhCCHHHHHHHHHhCCEEEEeechhhhHhHHHHHHHcCCeEEEe----cCChHHHHHHh-CCCeEEec---cc
Confidence 46664 478874 56999999977777 46899999999999999876 56556666777 48877775 38
Q ss_pred CcCHHHHHHHHHHHhc
Q 012314 401 IITREEIKNKVDQVLG 416 (466)
Q Consensus 401 ~~~~~~l~~~i~~ll~ 416 (466)
.++...|+++=+++..
T Consensus 317 ~L~~~~v~ea~rql~~ 332 (360)
T PF07429_consen 317 ELDEALVREAQRQLAN 332 (360)
T ss_pred cCCHHHHHHHHHHHhh
Confidence 8999999999888764
|
This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall |
| >COG4370 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=92.23 E-value=0.48 Score=42.92 Aligned_cols=85 Identities=16% Similarity=0.190 Sum_probs=56.3
Q ss_pred cccchhhhhcCCCcccceeccCCchhh-hhhhcCcceeecccccchhh--hHHHHHHhhhceeEeecCCCCCcCHHHHHH
Q 012314 333 SWAPQLRVLNHPSIACFLSHCGWNSTM-EGVSNGIPFLCWPYFGDQFL--NERYICDFWKVGLKFDRDEGGIITREEIKN 409 (466)
Q Consensus 333 ~~~p~~~ll~~~~~~~~i~hgG~~s~~-eal~~GvP~l~~P~~~DQ~~--~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~ 409 (466)
.|-...++|.++++ .|--. ||.. +++=.|||+|.+|-.+-|+. .|+|=.+-+|..+.+-. -.+..-..
T Consensus 301 sqqsfadiLH~ada--algmA--GTAtEQavGLGkPvi~fPg~GPQy~pgFA~rQ~rLLG~sltlv~-----~~aq~a~~ 371 (412)
T COG4370 301 SQQSFADILHAADA--ALGMA--GTATEQAVGLGKPVIGFPGQGPQYNPGFAERQQRLLGASLTLVR-----PEAQAAAQ 371 (412)
T ss_pred eHHHHHHHHHHHHH--HHHhc--cchHHHhhccCCceeecCCCCCCcChHHHHHHHHHhcceeeecC-----CchhhHHH
Confidence 55555566666555 44333 3443 45778999999999998876 66666666788877742 23334444
Q ss_pred HHHHHhcCHHHHHHHHH
Q 012314 410 KVDQVLGNQDFKARALE 426 (466)
Q Consensus 410 ~i~~ll~~~~~r~~a~~ 426 (466)
..+++|.|+.+.+++++
T Consensus 372 ~~q~ll~dp~r~~air~ 388 (412)
T COG4370 372 AVQELLGDPQRLTAIRH 388 (412)
T ss_pred HHHHHhcChHHHHHHHh
Confidence 45559999988887763
|
|
| >PRK13932 stationary phase survival protein SurE; Provisional | Back alignment and domain information |
|---|
Probab=92.16 E-value=1.7 Score=39.20 Aligned_cols=114 Identities=16% Similarity=0.100 Sum_probs=60.6
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCC--CCCCCCCCccHHH
Q 012314 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPD--GMEPWEDRNDLGK 80 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 80 (466)
+||||+.- --.=|.--+.+|+++|.+.| +|+++.+...+....... .....+++..+.. +.. .........
T Consensus 5 ~M~ILltN-DDGi~a~Gi~aL~~~l~~~g-~V~VvAP~~~~Sg~g~ai----t~~~pl~~~~~~~~~~~~-~y~v~GTPa 77 (257)
T PRK13932 5 KPHILVCN-DDGIEGEGIHVLAASMKKIG-RVTVVAPAEPHSGMSHAM----TLGVPLRIKEYQKNNRFF-GYTVSGTPV 77 (257)
T ss_pred CCEEEEEC-CCCCCCHHHHHHHHHHHhCC-CEEEEcCCCCCCCCcccc----cCCCCeEEEEEccCCCce-EEEEcCcHH
Confidence 46766543 32223344888999998888 799999987666554332 1123455544331 100 000000111
Q ss_pred HHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCC-------------chhHHHHHHHcCCceEEecc
Q 012314 81 LIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGN-------------IGWSMEIAKKMNVRGAVFWP 136 (466)
Q Consensus 81 ~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~-------------~~~~~~~A~~lgiP~v~~~~ 136 (466)
-+ +.--+..+-. .+||+||.-.. +..|..-|..+|||.|.++.
T Consensus 78 DC----------V~lal~~~~~---~~pDLVvSGIN~G~N~G~dv~ySGTVgAA~Ea~~~GiPsIA~S~ 133 (257)
T PRK13932 78 DC----------IKVALSHILP---EKPDLIVSGINYGSNTATNTLYSGTVAAALEGAIQGIPSLAFSL 133 (257)
T ss_pred HH----------HHHHHHhhcC---CCCCEEEECCcCCCCCCcCEecchhHHHHHHHHHcCCCeEEEEc
Confidence 11 1111122211 57999996532 22455667788999999873
|
|
| >PRK02797 4-alpha-L-fucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=91.97 E-value=3 Score=38.40 Aligned_cols=80 Identities=14% Similarity=0.177 Sum_probs=57.8
Q ss_pred CCceee-cccc---hhhhhcCCCcccceec--cCCchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCCC
Q 012314 327 ARGQMI-SWAP---QLRVLNHPSIACFLSH--CGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGG 400 (466)
Q Consensus 327 ~n~~~~-~~~p---~~~ll~~~~~~~~i~h--gG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~ 400 (466)
+++.+. +++| +..+|+.+++..|+++ =|.|+++-.++.|||++.-- +-+.+.. +.+ .|+-+..+. +
T Consensus 206 ~~~~~L~e~l~f~eYl~lL~~~Dl~~f~~~RQQgiGnl~lLi~~G~~v~l~r---~n~fwqd-l~e-~gv~Vlf~~---d 277 (322)
T PRK02797 206 ENFQILTEKLPFDDYLALLRQCDLGYFIFARQQGIGTLCLLIQLGKPVVLSR---DNPFWQD-LTE-QGLPVLFTG---D 277 (322)
T ss_pred ccEEehhhhCCHHHHHHHHHhCCEEEEeechhhHHhHHHHHHHCCCcEEEec---CCchHHH-HHh-CCCeEEecC---C
Confidence 577654 7777 5579999999888884 58999999999999998762 2223333 455 488887663 7
Q ss_pred CcCHHHHHHHHHHH
Q 012314 401 IITREEIKNKVDQV 414 (466)
Q Consensus 401 ~~~~~~l~~~i~~l 414 (466)
.++...+.++=+++
T Consensus 278 ~L~~~~v~e~~rql 291 (322)
T PRK02797 278 DLDEDIVREAQRQL 291 (322)
T ss_pred cccHHHHHHHHHHH
Confidence 78888777764443
|
|
| >PF02374 ArsA_ATPase: Anion-transporting ATPase; PDB: 2WOO_A 3IBG_B 3SJA_A 3H84_B 3SJD_A 3ZS9_A 3A37_A 2WOJ_A 3SJC_B 3A36_B | Back alignment and domain information |
|---|
Probab=91.90 E-value=0.47 Score=44.36 Aligned_cols=42 Identities=26% Similarity=0.336 Sum_probs=33.2
Q ss_pred CEEEEEcC-CCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHH
Q 012314 4 PRVLVMPA-PAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKR 45 (466)
Q Consensus 4 ~~il~~~~-~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~ 45 (466)
+|++|+.. ||-|=..-..++|-.++++|++|.++++++....
T Consensus 1 ~r~~~~~GKGGVGKTT~aaA~A~~~A~~G~rtLlvS~Dpa~~L 43 (305)
T PF02374_consen 1 MRILFFGGKGGVGKTTVAAALALALARRGKRTLLVSTDPAHSL 43 (305)
T ss_dssp -SEEEEEESTTSSHHHHHHHHHHHHHHTTS-EEEEESSTTTHH
T ss_pred CeEEEEecCCCCCcHHHHHHHHHHHhhCCCCeeEeecCCCccH
Confidence 35666664 4559999999999999999999999999987653
|
... |
| >cd02067 B12-binding B12 binding domain (B12-BD) | Back alignment and domain information |
|---|
Probab=91.86 E-value=2.1 Score=33.56 Aligned_cols=106 Identities=18% Similarity=0.285 Sum_probs=64.1
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCccHHHHHHH
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKLIEK 84 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (466)
||++.+.++-.|.....-++..|.++|++|.........+.+.+.... .+..++.++.....
T Consensus 1 ~vl~~~~~~e~H~lG~~~~~~~l~~~G~~V~~lg~~~~~~~l~~~~~~-----~~pdvV~iS~~~~~------------- 62 (119)
T cd02067 1 KVVIATVGGDGHDIGKNIVARALRDAGFEVIDLGVDVPPEEIVEAAKE-----EDADAIGLSGLLTT------------- 62 (119)
T ss_pred CEEEEeeCCchhhHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHH-----cCCCEEEEeccccc-------------
Confidence 588999999999999999999999999999888776444444333211 23344443321111
Q ss_pred HHHhccHHHHHHHHHHhcCCCC-CccEEEeCCCchhHHHHHHHcCCceEE
Q 012314 85 CLQVMPGKLEELIEEINSREDE-KIDCFIADGNIGWSMEIAKKMNVRGAV 133 (466)
Q Consensus 85 ~~~~~~~~~~~ll~~l~~~~~~-~~DlvV~D~~~~~~~~~A~~lgiP~v~ 133 (466)
....+.++++.+++.. . .+-+++.-.........++..|+=.+.
T Consensus 63 ----~~~~~~~~i~~l~~~~-~~~~~i~vGG~~~~~~~~~~~~~G~D~~~ 107 (119)
T cd02067 63 ----HMTLMKEVIEELKEAG-LDDIPVLVGGAIVTRDFKFLKEIGVDAYF 107 (119)
T ss_pred ----cHHHHHHHHHHHHHcC-CCCCeEEEECCCCChhHHHHHHcCCeEEE
Confidence 1233455555555532 2 344566665433334577878875444
|
This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins. |
| >PRK05986 cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase; Validated | Back alignment and domain information |
|---|
Probab=91.79 E-value=3.9 Score=35.04 Aligned_cols=104 Identities=14% Similarity=0.083 Sum_probs=64.2
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcch---HHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCcc
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNH---KRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRND 77 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (466)
|.+-.|.+++..+.|=....+.+|-+.+.+|++|.++-.-... ...... ...+++.+.....++.-.. .+
T Consensus 20 ~~~g~v~v~~g~GkGKtt~a~g~a~ra~g~G~~V~ivQFlKg~~~~GE~~~l-----~~l~~v~~~~~g~~~~~~~--~~ 92 (191)
T PRK05986 20 EEKGLLIVHTGNGKGKSTAAFGMALRAVGHGKKVGVVQFIKGAWSTGERNLL-----EFGGGVEFHVMGTGFTWET--QD 92 (191)
T ss_pred ccCCeEEEECCCCCChHHHHHHHHHHHHHCCCeEEEEEEecCCCccCHHHHH-----hcCCCcEEEECCCCCcccC--CC
Confidence 3456899999999999999999999999999999988653221 111110 1124788887765432211 11
Q ss_pred HHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCch
Q 012314 78 LGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIG 118 (466)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~ 118 (466)
..... ......+....+.+.+ .++|+||.|....
T Consensus 93 ~~e~~----~~~~~~~~~a~~~l~~---~~ydlvVLDEi~~ 126 (191)
T PRK05986 93 RERDI----AAAREGWEEAKRMLAD---ESYDLVVLDELTY 126 (191)
T ss_pred cHHHH----HHHHHHHHHHHHHHhC---CCCCEEEEehhhH
Confidence 12212 2223334444444444 7899999998544
|
|
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=91.38 E-value=4.3 Score=43.60 Aligned_cols=115 Identities=10% Similarity=0.117 Sum_probs=67.3
Q ss_pred CCceeecccchh---hhhcCCCcccceec---cC-CchhhhhhhcCcceeeccccc--chhhh--HHHH-HHhhhceeEe
Q 012314 327 ARGQMISWAPQL---RVLNHPSIACFLSH---CG-WNSTMEGVSNGIPFLCWPYFG--DQFLN--ERYI-CDFWKVGLKF 394 (466)
Q Consensus 327 ~n~~~~~~~p~~---~ll~~~~~~~~i~h---gG-~~s~~eal~~GvP~l~~P~~~--DQ~~~--a~rv-~~~~G~G~~l 394 (466)
+++.+..+.+.. .++..+++ ||.- =| ..+.+||+++|+|.|+....+ |.-.. ...+ .+ -+-|..+
T Consensus 837 drV~FlG~~de~lah~IYAaADI--FLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~e-g~NGfLf 913 (977)
T PLN02939 837 NNIRLILKYDEALSHSIYAASDM--FIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVE-LRNGFTF 913 (977)
T ss_pred CeEEEEeccCHHHHHHHHHhCCE--EEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccC-CCceEEe
Confidence 567777777754 47866666 7753 23 347899999999999876543 21111 0111 12 1567777
Q ss_pred ecCCCCCcCHHHHHHHHHHHhc----CHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHh
Q 012314 395 DRDEGGIITREEIKNKVDQVLG----NQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVKTN 455 (466)
Q Consensus 395 ~~~~~~~~~~~~l~~~i~~ll~----~~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~ 455 (466)
.+ -+++.|.++|.+++. |++.+++..+ . ++...-+-...+.+..+.+...
T Consensus 914 ~~-----~D~eaLa~AL~rAL~~~~~dpe~~~~L~~---~---am~~dFSWe~~A~qYeeLY~~l 967 (977)
T PLN02939 914 LT-----PDEQGLNSALERAFNYYKRKPEVWKQLVQ---K---DMNIDFSWDSSASQYEELYQRA 967 (977)
T ss_pred cC-----CCHHHHHHHHHHHHHHhccCHHHHHHHHH---H---HHHhcCCHHHHHHHHHHHHHHH
Confidence 43 478899999988874 5555544432 1 1122344455555555544443
|
|
| >TIGR00087 surE 5'/3'-nucleotidase SurE | Back alignment and domain information |
|---|
Probab=91.29 E-value=2.5 Score=37.98 Aligned_cols=101 Identities=19% Similarity=0.019 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCC--CCCCCCCCccHHHHHHHHHHhccHHHH
Q 012314 17 VIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPD--GMEPWEDRNDLGKLIEKCLQVMPGKLE 94 (466)
Q Consensus 17 ~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (466)
.--+.+|+++|.+.| +|+++.+...+....+.. .....+++..++. +. ..........- .+.
T Consensus 13 a~Gi~aL~~~l~~~g-~V~VvAP~~~~Sg~g~ai----t~~~pl~~~~~~~~~~~-~~~~v~GTPaD----------cv~ 76 (244)
T TIGR00087 13 SPGIRALYQALKELG-EVTVVAPARQRSGTGHSL----TLFEPLRVGQVKVKNGA-HIYAVDGTPTD----------CVI 76 (244)
T ss_pred CHhHHHHHHHHHhCC-CEEEEeCCCCccccccCc----CCCCCeEEEEeccCCCc-cEEEEcCcHHH----------HHH
Confidence 334788999999988 899999987777664432 1223455544431 11 00000000000 111
Q ss_pred HHHHHHhcCCCCCccEEEeCCC-------------chhHHHHHHHcCCceEEecc
Q 012314 95 ELIEEINSREDEKIDCFIADGN-------------IGWSMEIAKKMNVRGAVFWP 136 (466)
Q Consensus 95 ~ll~~l~~~~~~~~DlvV~D~~-------------~~~~~~~A~~lgiP~v~~~~ 136 (466)
--+..+-. .+||+||.-.. +..|..-|..+|||.+.++.
T Consensus 77 ~gl~~l~~---~~pDLVvSGiN~G~N~g~~v~ySGTVgAA~ea~~~GipaiA~S~ 128 (244)
T TIGR00087 77 LGINELMP---EVPDLVISGINAGENLGTDVTYSGTVGAAMEAAIHGVPAIAISL 128 (244)
T ss_pred HHHHHhcc---CCCCeEEeccccCCCCCccEecchhHHHHHHHHHcCCCeEEEEe
Confidence 11112211 57999996542 22455667788999999874
|
E. coli SurE is Recommended cutoffs are 15 for homology, 40 for probable orthology, and 200 for orthology with full-length homology. |
| >COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=90.68 E-value=11 Score=34.99 Aligned_cols=88 Identities=18% Similarity=0.300 Sum_probs=57.4
Q ss_pred CCceeecccch---hhhhcCCCcccceec---cCCch-hhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCC
Q 012314 327 ARGQMISWAPQ---LRVLNHPSIACFLSH---CGWNS-TMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEG 399 (466)
Q Consensus 327 ~n~~~~~~~p~---~~ll~~~~~~~~i~h---gG~~s-~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~ 399 (466)
.++.+.++++. ..++..+++ ++.- .|.|. +.||+++|+|+|+. +.......+.+ -+.|....
T Consensus 257 ~~v~~~g~~~~~~~~~~~~~~~~--~v~ps~~e~~~~~~~Ea~a~g~pvi~~----~~~~~~e~~~~-~~~g~~~~---- 325 (381)
T COG0438 257 DNVKFLGYVPDEELAELLASADV--FVLPSLSEGFGLVLLEAMAAGTPVIAS----DVGGIPEVVED-GETGLLVP---- 325 (381)
T ss_pred CcEEEecccCHHHHHHHHHhCCE--EEeccccccchHHHHHHHhcCCcEEEC----CCCChHHHhcC-CCceEecC----
Confidence 56777788882 246665655 5554 35543 59999999999877 44444444443 13476332
Q ss_pred CCcCHHHHHHHHHHHhcCHHHHHHHHH
Q 012314 400 GIITREEIKNKVDQVLGNQDFKARALE 426 (466)
Q Consensus 400 ~~~~~~~l~~~i~~ll~~~~~r~~a~~ 426 (466)
..+.+.+.+++..++++.+.+++...
T Consensus 326 -~~~~~~~~~~i~~~~~~~~~~~~~~~ 351 (381)
T COG0438 326 -PGDVEELADALEQLLEDPELREELGE 351 (381)
T ss_pred -CCCHHHHHHHHHHHhcCHHHHHHHHH
Confidence 22789999999999988755554443
|
|
| >cd00561 CobA_CobO_BtuR ATP:corrinoid adenosyltransferase BtuR/CobO/CobP | Back alignment and domain information |
|---|
Probab=89.66 E-value=11 Score=31.37 Aligned_cols=99 Identities=18% Similarity=0.150 Sum_probs=59.4
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEE---EeCC--cchHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCccH
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTF---VNTD--YNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDL 78 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~---~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (466)
--|.+++.+|.|=....+.+|-+.+.+|++|.| +-.. ..+..+.+. .+++.+.....+..-.. .+.
T Consensus 3 G~i~vy~g~G~Gkt~~a~g~~~ra~~~g~~v~~vQFlKg~~~~gE~~~l~~-------l~~v~~~~~g~~~~~~~--~~~ 73 (159)
T cd00561 3 GLIQVYTGNGKGKTTAALGLALRALGHGYRVGVVQFLKGGWKYGELKALER-------LPNIEIHRMGRGFFWTT--END 73 (159)
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEEeCCCCccCHHHHHHh-------CCCcEEEECCCCCccCC--CCh
Confidence 357888999999999999999999999999999 4442 111122221 14788877664432211 112
Q ss_pred HHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCch
Q 012314 79 GKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIG 118 (466)
Q Consensus 79 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~ 118 (466)
...... ....++...+.+.. ..+|+||.|....
T Consensus 74 ~~~~~~----a~~~~~~a~~~~~~---~~~dLlVLDEi~~ 106 (159)
T cd00561 74 EEDIAA----AAEGWAFAKEAIAS---GEYDLVILDEINY 106 (159)
T ss_pred HHHHHH----HHHHHHHHHHHHhc---CCCCEEEEechHh
Confidence 222222 22333333333333 7899999998544
|
This family consists of the BtuR, CobO, CobP proteins all of which are Cob(I)alamin (vitamin B12) adenosyltransferase, which is involved in cobalamin (vitamin B12) biosynthesis. This enzyme is a homodimer, which catalyzes the adenosylation reaction: ATP + cob(I)alamin + H2O <= phosphate + diphosphate + adenosylcobalamin. |
| >COG0003 ArsA Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
Probab=89.44 E-value=1.3 Score=41.41 Aligned_cols=43 Identities=23% Similarity=0.272 Sum_probs=34.8
Q ss_pred CCEEEEEcCCCc-cCHHHHHHHHHHHHhCCCEEEEEeCCcchHH
Q 012314 3 RPRVLVMPAPAQ-GHVIPLLEFSQCLAKHGFRVTFVNTDYNHKR 45 (466)
Q Consensus 3 ~~~il~~~~~~~-GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~ 45 (466)
++||+|++.=|+ |=..-..++|-.|++.|.+|.++++++.+..
T Consensus 1 ~~riv~f~GKGGVGKTT~aaA~A~~lA~~g~kvLlvStDPAhsL 44 (322)
T COG0003 1 MTRIVFFTGKGGVGKTTIAAATAVKLAESGKKVLLVSTDPAHSL 44 (322)
T ss_pred CcEEEEEecCCcccHHHHHHHHHHHHHHcCCcEEEEEeCCCCch
Confidence 357888885544 9988889999999999999999988876553
|
|
| >TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=88.98 E-value=1.6 Score=43.49 Aligned_cols=100 Identities=13% Similarity=0.139 Sum_probs=64.1
Q ss_pred cccchhh---hhcCCCccccee---ccCCc-hhhhhhhcCcc----eeecccccchhhhHHHHHHhhhceeEeecCCCCC
Q 012314 333 SWAPQLR---VLNHPSIACFLS---HCGWN-STMEGVSNGIP----FLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGI 401 (466)
Q Consensus 333 ~~~p~~~---ll~~~~~~~~i~---hgG~~-s~~eal~~GvP----~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~ 401 (466)
..+|+.+ ++..+++ ++. +-|.| ++.||+++|+| +|+.-..+ .+. . ++-|+.+++
T Consensus 342 ~~~~~~el~aly~aaDv--~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G----~~~---~-l~~gllVnP----- 406 (456)
T TIGR02400 342 RSYDREELMALYRAADV--GLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAG----AAQ---E-LNGALLVNP----- 406 (456)
T ss_pred CCCCHHHHHHHHHhCcE--EEECccccccCccHHHHHHhcCCCCceEEEeCCCC----ChH---H-hCCcEEECC-----
Confidence 4555553 5766776 664 44654 66899999999 66654332 222 2 345777754
Q ss_pred cCHHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Q 012314 402 ITREEIKNKVDQVLGNQ--DFKARALELKEKAMSSVREGGSSYKTFQNFLQWV 452 (466)
Q Consensus 402 ~~~~~l~~~i~~ll~~~--~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~ 452 (466)
.+.++++++|.++|+.+ +-+++.+++.+.+.. -+...-.+++++.+
T Consensus 407 ~d~~~lA~aI~~aL~~~~~er~~r~~~~~~~v~~-----~~~~~W~~~~l~~l 454 (456)
T TIGR02400 407 YDIDGMADAIARALTMPLEEREERHRAMMDKLRK-----NDVQRWREDFLSDL 454 (456)
T ss_pred CCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhh-----CCHHHHHHHHHHHh
Confidence 57999999999999754 556666666666543 35555556665554
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib |
| >COG0496 SurE Predicted acid phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=88.92 E-value=3.3 Score=37.05 Aligned_cols=96 Identities=20% Similarity=0.183 Sum_probs=57.3
Q ss_pred cCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCC------CCCCCCCCccHHHHHHHHHHh
Q 012314 15 GHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPD------GMEPWEDRNDLGKLIEKCLQV 88 (466)
Q Consensus 15 GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~ 88 (466)
=|.--+.+|+++|. .+++|+++.+...+........ ....++...+.. +.|.+ +
T Consensus 11 i~a~Gi~aL~~al~-~~~dV~VVAP~~~qSg~s~slT----l~~Plr~~~~~~~~~av~GTPaD---------C------ 70 (252)
T COG0496 11 IHAPGIRALARALR-EGADVTVVAPDREQSGASHSLT----LHEPLRVRQVDNGAYAVNGTPAD---------C------ 70 (252)
T ss_pred cCCHHHHHHHHHHh-hCCCEEEEccCCCCcccccccc----cccCceeeEeccceEEecCChHH---------H------
Confidence 34455788899998 9999999999988776644321 112233322221 11111 1
Q ss_pred ccHHHHHHHHHHhcCCCCCccEEEeCCC----------c---hhHHHHHHHcCCceEEecc
Q 012314 89 MPGKLEELIEEINSREDEKIDCFIADGN----------I---GWSMEIAKKMNVRGAVFWP 136 (466)
Q Consensus 89 ~~~~~~~ll~~l~~~~~~~~DlvV~D~~----------~---~~~~~~A~~lgiP~v~~~~ 136 (466)
..-.+..++++ .+||+||.-.. + ..|+.=|..+|||.|.++.
T Consensus 71 V~lal~~l~~~------~~pDLVvSGIN~G~Nlg~dv~ySGTVaaA~Ea~~~GipsIA~S~ 125 (252)
T COG0496 71 VILGLNELLKE------PRPDLVVSGINAGANLGDDVIYSGTVAAAMEAALLGIPAIAISL 125 (252)
T ss_pred HHHHHHHhccC------CCCCEEEeCccCCCccccceeeeehHHHHHHHHHcCccceeeee
Confidence 11134445444 56999996432 2 2455566788999999874
|
|
| >COG2894 MinD Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
Probab=88.07 E-value=3 Score=36.31 Aligned_cols=38 Identities=21% Similarity=0.405 Sum_probs=32.0
Q ss_pred CEEEEEcCC--CccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012314 4 PRVLVMPAP--AQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (466)
Q Consensus 4 ~~il~~~~~--~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 41 (466)
.++.+++.+ |-|-..-...|+..|+++|+.|.++-.+-
T Consensus 2 ~~iIVvTSGKGGVGKTTttAnig~aLA~~GkKv~liD~Di 41 (272)
T COG2894 2 ARIIVVTSGKGGVGKTTTTANIGTALAQLGKKVVLIDFDI 41 (272)
T ss_pred ceEEEEecCCCCcCccchhHHHHHHHHHcCCeEEEEecCc
Confidence 457777765 55899999999999999999999998863
|
|
| >COG1484 DnaC DNA replication protein [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=88.01 E-value=2.4 Score=38.48 Aligned_cols=47 Identities=15% Similarity=0.265 Sum_probs=39.2
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHh
Q 012314 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVES 49 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~ 49 (466)
...++|+-.+|.|=..=..+||.+|.++|++|+|++.+.....+...
T Consensus 105 ~~nl~l~G~~G~GKThLa~Ai~~~l~~~g~sv~f~~~~el~~~Lk~~ 151 (254)
T COG1484 105 GENLVLLGPPGVGKTHLAIAIGNELLKAGISVLFITAPDLLSKLKAA 151 (254)
T ss_pred CCcEEEECCCCCcHHHHHHHHHHHHHHcCCeEEEEEHHHHHHHHHHH
Confidence 45688888888877777899999999999999999998777766554
|
|
| >cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins | Back alignment and domain information |
|---|
Probab=87.08 E-value=4.9 Score=35.00 Aligned_cols=106 Identities=18% Similarity=0.277 Sum_probs=67.3
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCccHHHHH
Q 012314 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKLI 82 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (466)
+.|+++.+.++-.|-....-++.-|.+.|++|+.+...-..+.+.+.... .+..++.++-....
T Consensus 82 ~~~vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~~~p~~~l~~~~~~-----~~~d~v~lS~~~~~----------- 145 (201)
T cd02070 82 KGKVVIGTVEGDIHDIGKNLVATMLEANGFEVIDLGRDVPPEEFVEAVKE-----HKPDILGLSALMTT----------- 145 (201)
T ss_pred CCeEEEEecCCccchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHH-----cCCCEEEEeccccc-----------
Confidence 46899999999999999999999999999999988876444444333211 24455544422111
Q ss_pred HHHHHhccHHHHHHHHHHhcCCCC--CccEEEeCCCchhHHHHHHHcCCceEE
Q 012314 83 EKCLQVMPGKLEELIEEINSREDE--KIDCFIADGNIGWSMEIAKKMNVRGAV 133 (466)
Q Consensus 83 ~~~~~~~~~~~~~ll~~l~~~~~~--~~DlvV~D~~~~~~~~~A~~lgiP~v~ 133 (466)
....++++++.+++.. . ++.++|.-.. .....++.+|.=.+.
T Consensus 146 ------~~~~~~~~i~~lr~~~-~~~~~~i~vGG~~--~~~~~~~~~GaD~~~ 189 (201)
T cd02070 146 ------TMGGMKEVIEALKEAG-LRDKVKVMVGGAP--VNQEFADEIGADGYA 189 (201)
T ss_pred ------cHHHHHHHHHHHHHCC-CCcCCeEEEECCc--CCHHHHHHcCCcEEE
Confidence 2334566666666632 2 3455565542 234678887765444
|
A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases. |
| >PRK13935 stationary phase survival protein SurE; Provisional | Back alignment and domain information |
|---|
Probab=86.55 E-value=9.8 Score=34.30 Aligned_cols=33 Identities=12% Similarity=0.138 Sum_probs=24.4
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHh
Q 012314 16 HVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVES 49 (466)
Q Consensus 16 H~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~ 49 (466)
|.--+.+|+++|.+ +|+|+++.+...+......
T Consensus 12 ~a~Gi~aL~~~l~~-~~~V~VvAP~~~qSg~g~a 44 (253)
T PRK13935 12 TSPGIIILAEYLSE-KHEVFVVAPDKERSATGHA 44 (253)
T ss_pred CCHHHHHHHHHHHh-CCcEEEEccCCCCcccccc
Confidence 33447888999965 6899999998777665443
|
|
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=86.49 E-value=3.6 Score=37.26 Aligned_cols=92 Identities=15% Similarity=0.214 Sum_probs=54.3
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCccHHHHHHH
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKLIEK 84 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (466)
+|+++ +|+|. -..|+++|.++||+|+..+............ ....... ..+
T Consensus 2 ~ILvl--GGT~e---gr~la~~L~~~g~~v~~s~~t~~~~~~~~~~-------g~~~v~~--g~l--------------- 52 (256)
T TIGR00715 2 TVLLM--GGTVD---SRAIAKGLIAQGIEILVTVTTSEGKHLYPIH-------QALTVHT--GAL--------------- 52 (256)
T ss_pred eEEEE--echHH---HHHHHHHHHhCCCeEEEEEccCCcccccccc-------CCceEEE--CCC---------------
Confidence 45554 34442 6789999999999999888766543321110 0111111 000
Q ss_pred HHHhccHHHHHHHHHHhcCCCCCccEEEeCCCchh------HHHHHHHcCCceEEec
Q 012314 85 CLQVMPGKLEELIEEINSREDEKIDCFIADGNIGW------SMEIAKKMNVRGAVFW 135 (466)
Q Consensus 85 ~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~------~~~~A~~lgiP~v~~~ 135 (466)
-...+.++++. .++|+||--.+.++ +..+|+.+|||++.+-
T Consensus 53 ----~~~~l~~~l~~------~~i~~VIDAtHPfA~~is~~a~~a~~~~~ipylR~e 99 (256)
T TIGR00715 53 ----DPQELREFLKR------HSIDILVDATHPFAAQITTNATAVCKELGIPYVRFE 99 (256)
T ss_pred ----CHHHHHHHHHh------cCCCEEEEcCCHHHHHHHHHHHHHHHHhCCcEEEEE
Confidence 01224555555 78998775544332 4568899999999964
|
This enzyme was found to be a monomer by gel filtration. |
| >COG1618 Predicted nucleotide kinase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=86.09 E-value=3.3 Score=34.15 Aligned_cols=55 Identities=15% Similarity=0.237 Sum_probs=41.8
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecC
Q 012314 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIP 66 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 66 (466)
.+||++--.||.|-..-++.|++.|.++|+.|-=+-++...+.-.. .+|+.+++.
T Consensus 5 ~mki~ITG~PGvGKtTl~~ki~e~L~~~g~kvgGf~t~EVR~gGkR---------~GF~Ivdl~ 59 (179)
T COG1618 5 AMKIFITGRPGVGKTTLVLKIAEKLREKGYKVGGFITPEVREGGKR---------IGFKIVDLA 59 (179)
T ss_pred ceEEEEeCCCCccHHHHHHHHHHHHHhcCceeeeEEeeeeecCCeE---------eeeEEEEcc
Confidence 3689999999999999999999999999999875555443322111 367777776
|
|
| >PF00731 AIRC: AIR carboxylase; InterPro: IPR000031 Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE | Back alignment and domain information |
|---|
Probab=85.89 E-value=18 Score=29.70 Aligned_cols=139 Identities=14% Similarity=0.133 Sum_probs=73.1
Q ss_pred EEEEEeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCcccce
Q 012314 271 VVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFL 350 (466)
Q Consensus 271 ~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~~i 350 (466)
-|.|-.||.+ +...++++...|+..+..+-..+.+- -..|+.+. +++.. +.+-.+++||
T Consensus 2 ~V~Ii~gs~S--D~~~~~~a~~~L~~~gi~~~~~V~sa------HR~p~~l~----------~~~~~---~~~~~~~viI 60 (150)
T PF00731_consen 2 KVAIIMGSTS--DLPIAEEAAKTLEEFGIPYEVRVASA------HRTPERLL----------EFVKE---YEARGADVII 60 (150)
T ss_dssp EEEEEESSGG--GHHHHHHHHHHHHHTT-EEEEEE--T------TTSHHHHH----------HHHHH---TTTTTESEEE
T ss_pred eEEEEeCCHH--HHHHHHHHHHHHHHcCCCEEEEEEec------cCCHHHHH----------HHHHH---hccCCCEEEE
Confidence 4566677643 67789999999999997765555433 13444432 22221 1111233488
Q ss_pred eccCCc----hhhhhhhcCcceeecccccchhhhHH----HHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHH
Q 012314 351 SHCGWN----STMEGVSNGIPFLCWPYFGDQFLNER----YICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKA 422 (466)
Q Consensus 351 ~hgG~~----s~~eal~~GvP~l~~P~~~DQ~~~a~----rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~ 422 (466)
.=.|.. ++..++. -+|+|.+|....+..-.. .++-=-|+++..--- .+..++..++-.|-.+ .|+++++
T Consensus 61 a~AG~~a~Lpgvva~~t-~~PVIgvP~~~~~~~g~d~l~S~vqMp~g~pvatv~i-~~~~nAA~~A~~ILa~-~d~~l~~ 137 (150)
T PF00731_consen 61 AVAGMSAALPGVVASLT-TLPVIGVPVSSGYLGGLDSLLSIVQMPSGVPVATVGI-NNGFNAALLAARILAL-KDPELRE 137 (150)
T ss_dssp EEEESS--HHHHHHHHS-SS-EEEEEE-STTTTTHHHHHHHHT--TTS--EE-SS-THHHHHHHHHHHHHHT-T-HHHHH
T ss_pred EECCCcccchhhheecc-CCCEEEeecCcccccCcccHHHHHhccCCCCceEEEc-cCchHHHHHHHHHHhc-CCHHHHH
Confidence 877654 4444444 799999998766443221 111101444433210 1234445555555433 5789999
Q ss_pred HHHHHHHHHHH
Q 012314 423 RALELKEKAMS 433 (466)
Q Consensus 423 ~a~~~~~~~~~ 433 (466)
+.+..+++.++
T Consensus 138 kl~~~~~~~~~ 148 (150)
T PF00731_consen 138 KLRAYREKMKE 148 (150)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHc
Confidence 99998888875
|
PurK, N5-carboxyaminoimidazole ribonucleotide (N5_CAIR) synthetase, catalyzes the conversion of 5-aminoimidazole ribonucleotide (AIR), ATP, and bicarbonate to N5-CAIR, ADP, and Pi. PurE converts N5-CAIR to CAIR, the sixth step of de novo purine biosynthesis. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. Some members of this family contain two copies of this domain []. The crystal structure of PurE indicates a unique quaternary structure that confirms the octameric nature of the enzyme [].; GO: 0004638 phosphoribosylaminoimidazole carboxylase activity, 0006189 'de novo' IMP biosynthetic process; PDB: 3TRH_O 2YWX_A 2NSL_A 1D7A_A 2NSJ_A 1QCZ_A 2ATE_A 2NSH_A 3RG8_C 3RGG_D .... |
| >PRK01077 cobyrinic acid a,c-diamide synthase; Validated | Back alignment and domain information |
|---|
Probab=85.64 E-value=7.8 Score=38.57 Aligned_cols=110 Identities=15% Similarity=0.238 Sum_probs=64.3
Q ss_pred CCCCEEEEEcCC-CccCHHHHHHHHHHHHhCCCEEEEEeCCcch-HHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCccH
Q 012314 1 MSRPRVLVMPAP-AQGHVIPLLEFSQCLAKHGFRVTFVNTDYNH-KRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDL 78 (466)
Q Consensus 1 m~~~~il~~~~~-~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (466)
|++.++++.... +.|=..-...|++.|+++|++|..+-+.+.. +....... .+..... ++.. .
T Consensus 1 ~~m~~i~I~gt~s~~GKT~it~~L~~~L~~~G~~V~~fK~Gpd~~d~~~~~~~------~g~~~~~----ld~~--~--- 65 (451)
T PRK01077 1 MRMPALVIAAPASGSGKTTVTLGLMRALRRRGLRVQPFKVGPDYIDPAYHTAA------TGRPSRN----LDSW--M--- 65 (451)
T ss_pred CCCcEEEEEeCCCCCcHHHHHHHHHHHHHhCCCCcceeecCCCcccHHHHHHH------hCCCccc----CCce--e---
Confidence 666667776544 4488899999999999999999988774321 10000000 0000000 0000 0
Q ss_pred HHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCC------------chhHHHHHHHcCCceEEeccch
Q 012314 79 GKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGN------------IGWSMEIAKKMNVRGAVFWPSS 138 (466)
Q Consensus 79 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~------------~~~~~~~A~~lgiP~v~~~~~~ 138 (466)
.....+++.++++. .+.|++|++.. ......+|+.++.|++.+....
T Consensus 66 ---------~~~~~v~~~~~~~~----~~~D~vlVEGagGl~~g~~~~~~~~s~adiA~~l~~pviLV~~~~ 124 (451)
T PRK01077 66 ---------MGEELVRALFARAA----QGADIAVIEGVMGLFDGAGSDPDEGSTADIAKLLGAPVVLVVDAS 124 (451)
T ss_pred ---------CCHHHHHHHHHHhc----ccCCEEEEECCCccccCCccCCCCCCHHHHHHHhCCCEEEEECCc
Confidence 01234455555443 46899997443 1246789999999999987643
|
|
| >TIGR00708 cobA cob(I)alamin adenosyltransferase | Back alignment and domain information |
|---|
Probab=85.30 E-value=20 Score=30.22 Aligned_cols=98 Identities=10% Similarity=0.128 Sum_probs=58.4
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEE---eCCc--chHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCccH
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFV---NTDY--NHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDL 78 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~---~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (466)
--|.+++..+.|-....+.+|-+.+.+|++|.++ -... .+....+. .++++.....++.-.. .+.
T Consensus 6 Gli~v~~g~GkGKtt~a~g~a~ra~~~g~~v~ivQFlKg~~~~GE~~~l~~--------~~~~~~~~g~g~~~~~--~~~ 75 (173)
T TIGR00708 6 GIIIVHTGNGKGKTTAAFGMALRALGHGKKVGVIQFIKGAWPNGERAAFEP--------HGVEFQVMGTGFTWET--QNR 75 (173)
T ss_pred cEEEEECCCCCChHHHHHHHHHHHHHCCCeEEEEEEecCCcccChHHHHHh--------cCcEEEECCCCCeecC--CCc
Confidence 3578888899999999999999999999999655 3331 11112111 1677777765443221 111
Q ss_pred HHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCch
Q 012314 79 GKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIG 118 (466)
Q Consensus 79 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~ 118 (466)
...... ....+....+.+.+ .++|+||.|....
T Consensus 76 ~~~~~~----~~~~~~~a~~~l~~---~~~DlvVLDEi~~ 108 (173)
T TIGR00708 76 EADTAI----AKAAWQHAKEMLAD---PELDLVLLDELTY 108 (173)
T ss_pred HHHHHH----HHHHHHHHHHHHhc---CCCCEEEehhhHH
Confidence 111121 22233333333433 7899999998543
|
Alternate name: corrinoid adenosyltransferase. |
| >TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family | Back alignment and domain information |
|---|
Probab=85.24 E-value=7.5 Score=33.71 Aligned_cols=105 Identities=15% Similarity=0.160 Sum_probs=68.1
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCccHHHHH
Q 012314 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKLI 82 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (466)
+.+|++.|.++-.|-....-++.-|..+|++|+++...-..+.+.+.... .+.+++.++-....
T Consensus 84 ~~~vv~~t~~gd~H~lG~~~v~~~l~~~G~~vi~LG~~vp~e~~v~~~~~-----~~pd~v~lS~~~~~----------- 147 (197)
T TIGR02370 84 LGKVVCGVAEGDVHDIGKNIVVTMLRANGFDVIDLGRDVPIDTVVEKVKK-----EKPLMLTGSALMTT----------- 147 (197)
T ss_pred CCeEEEEeCCCchhHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHHHHH-----cCCCEEEEcccccc-----------
Confidence 46899999999999999999999999999999999988665555444311 24455544422111
Q ss_pred HHHHHhccHHHHHHHHHHhcCC-CCCccEEEeCCCchhHHHHHHHcCCce
Q 012314 83 EKCLQVMPGKLEELIEEINSRE-DEKIDCFIADGNIGWSMEIAKKMNVRG 131 (466)
Q Consensus 83 ~~~~~~~~~~~~~ll~~l~~~~-~~~~DlvV~D~~~~~~~~~A~~lgiP~ 131 (466)
....++++++.+++.+ ..++-++|.-... ...+|+..|.=.
T Consensus 148 ------~~~~~~~~i~~l~~~~~~~~v~i~vGG~~~--~~~~~~~~gad~ 189 (197)
T TIGR02370 148 ------TMYGQKDINDKLKEEGYRDSVKFMVGGAPV--TQDWADKIGADV 189 (197)
T ss_pred ------CHHHHHHHHHHHHHcCCCCCCEEEEEChhc--CHHHHHHhCCcE
Confidence 2233566666666642 1235566666432 345677766543
|
This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere. |
| >PRK01175 phosphoribosylformylglycinamidine synthase I; Provisional | Back alignment and domain information |
|---|
Probab=85.10 E-value=6.2 Score=35.87 Aligned_cols=60 Identities=17% Similarity=0.180 Sum_probs=41.6
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCC
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEP 71 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (466)
|.++||+++.+++...-. .++++|.++|+++.++......+.. .....++.+.+|.+...
T Consensus 1 ~~~~kvaVl~~pG~n~d~---e~~~Al~~aG~~v~~v~~~~~~~~~--------~~l~~~DgLvipGGfs~ 60 (261)
T PRK01175 1 MESIRVAVLRMEGTNCED---ETVKAFRRLGVEPEYVHINDLAAER--------KSVSDYDCLVIPGGFSA 60 (261)
T ss_pred CCCCEEEEEeCCCCCCHH---HHHHHHHHCCCcEEEEeeccccccc--------cchhhCCEEEECCCCCc
Confidence 778899999999886543 5578898999999988764321100 11246788888877543
|
|
| >PRK13933 stationary phase survival protein SurE; Provisional | Back alignment and domain information |
|---|
Probab=84.29 E-value=15 Score=33.10 Aligned_cols=28 Identities=14% Similarity=0.182 Sum_probs=22.1
Q ss_pred HHHHHHHHHhCCCEEEEEeCCcchHHHHH
Q 012314 20 LLEFSQCLAKHGFRVTFVNTDYNHKRVVE 48 (466)
Q Consensus 20 ~l~la~~L~~rGh~Vt~~~~~~~~~~~~~ 48 (466)
+.+|+++|.+ +|+|+++.+...+.....
T Consensus 16 l~aL~~~l~~-~~~V~VvAP~~~~Sg~g~ 43 (253)
T PRK13933 16 INTLAELLSK-YHEVIIVAPENQRSASSH 43 (253)
T ss_pred HHHHHHHHHh-CCcEEEEccCCCCccccc
Confidence 8888999965 689999999877765433
|
|
| >PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin) | Back alignment and domain information |
|---|
Probab=83.63 E-value=8.6 Score=30.01 Aligned_cols=44 Identities=27% Similarity=0.446 Sum_probs=36.6
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHH
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVE 48 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~ 48 (466)
|+++.+.+...|-.-+..++..|.++||+|.++-.....+.+.+
T Consensus 2 ~v~~~~~~~~~~~lGl~~la~~l~~~G~~v~~~d~~~~~~~l~~ 45 (121)
T PF02310_consen 2 RVVLACVPGEVHPLGLLYLAAYLRKAGHEVDILDANVPPEELVE 45 (121)
T ss_dssp EEEEEEBTTSSTSHHHHHHHHHHHHTTBEEEEEESSB-HHHHHH
T ss_pred EEEEEeeCCcchhHHHHHHHHHHHHCCCeEEEECCCCCHHHHHH
Confidence 78999999999999999999999999999999966654444433
|
Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A .... |
| >cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis | Back alignment and domain information |
|---|
Probab=83.62 E-value=3.1 Score=42.08 Aligned_cols=82 Identities=12% Similarity=0.060 Sum_probs=47.4
Q ss_pred hhhhhcCCCccccee---ccCCc-hhhhhhhcCcceeeccccc-chhhhHHHHHHhhhceeEeecCC--CCCcCHHHHHH
Q 012314 337 QLRVLNHPSIACFLS---HCGWN-STMEGVSNGIPFLCWPYFG-DQFLNERYICDFWKVGLKFDRDE--GGIITREEIKN 409 (466)
Q Consensus 337 ~~~ll~~~~~~~~i~---hgG~~-s~~eal~~GvP~l~~P~~~-DQ~~~a~rv~~~~G~G~~l~~~~--~~~~~~~~l~~ 409 (466)
+.+++..+++ +|. +-|+| +++||+++|+|+|+....+ ..... ..+......|+.+.+.. ...-+.++|++
T Consensus 468 y~E~~~g~dl--~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~-E~v~~~~~~gi~V~~r~~~~~~e~v~~La~ 544 (590)
T cd03793 468 YEEFVRGCHL--GVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFME-EHIEDPESYGIYIVDRRFKSPDESVQQLTQ 544 (590)
T ss_pred hHHHhhhceE--EEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhH-HHhccCCCceEEEecCCccchHHHHHHHHH
Confidence 4566766666 655 45554 7899999999999986532 11111 11111001577775311 11235678888
Q ss_pred HHHHHhcCHHHHH
Q 012314 410 KVDQVLGNQDFKA 422 (466)
Q Consensus 410 ~i~~ll~~~~~r~ 422 (466)
++.++++. +.|+
T Consensus 545 ~m~~~~~~-~~r~ 556 (590)
T cd03793 545 YMYEFCQL-SRRQ 556 (590)
T ss_pred HHHHHhCC-cHHH
Confidence 88888844 3343
|
GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity. |
| >cd00550 ArsA_ATPase Oxyanion-translocating ATPase (ArsA) | Back alignment and domain information |
|---|
Probab=83.61 E-value=13 Score=33.81 Aligned_cols=43 Identities=23% Similarity=0.246 Sum_probs=33.8
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHh
Q 012314 6 VLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVES 49 (466)
Q Consensus 6 il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~ 49 (466)
++|..-||.|-......+|..+++.|++|.++..+... .+...
T Consensus 3 ~~~~gkgG~GKtt~a~~la~~~a~~g~~vLlvd~D~~~-sl~~~ 45 (254)
T cd00550 3 IFFGGKGGVGKTTISAATAVRLAEQGKKVLLVSTDPAH-SLSDS 45 (254)
T ss_pred EEEECCCCchHHHHHHHHHHHHHHCCCCceEEeCCCcc-cHHHH
Confidence 34444666799999999999999999999999998753 44443
|
This ATPase is involved in transport of arsenite, antimonite or other oxyanions across biological membranes in all three kingdoms of life. ArsA contains a highly conserved AAA motif present in the AAA+ ATPase superfamily associated with a variety of cellular activities. To form a functional ATP-driven pump, ArsA interacts with the permease ArsB, which is a channel-forming integral membrane protein. One of the most interesting features of ArsA is the allosteric activation by its transport substrates. A divalent cation, typically Mg2+, is required for its enzymatic activity. |
| >PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT | Back alignment and domain information |
|---|
Probab=83.61 E-value=6.4 Score=36.07 Aligned_cols=39 Identities=10% Similarity=0.199 Sum_probs=30.9
Q ss_pred eecccchhhhhcCCCcccceeccCCchhhhhhhcCcceeecc
Q 012314 331 MISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWP 372 (466)
Q Consensus 331 ~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P 372 (466)
+.+-.+-.+|+.+++. +||-.+ ++-.||+.+|||++++.
T Consensus 187 ~~~~~~~~~Ll~~s~~--VvtinS-tvGlEAll~gkpVi~~G 225 (269)
T PF05159_consen 187 IDDDVNLYELLEQSDA--VVTINS-TVGLEALLHGKPVIVFG 225 (269)
T ss_pred ECCCCCHHHHHHhCCE--EEEECC-HHHHHHHHcCCceEEec
Confidence 3466777899988776 888754 36699999999999985
|
Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport |
| >TIGR01007 eps_fam capsular exopolysaccharide family | Back alignment and domain information |
|---|
Probab=83.20 E-value=28 Score=30.15 Aligned_cols=42 Identities=17% Similarity=0.462 Sum_probs=31.0
Q ss_pred CCEEEEEcC--CCccCHHHHHHHHHHHHhCCCEEEEEeCCcchH
Q 012314 3 RPRVLVMPA--PAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHK 44 (466)
Q Consensus 3 ~~~il~~~~--~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~ 44 (466)
.+|++.++. ++.|=..-...||..|+++|++|.++=.+....
T Consensus 16 ~~kvI~v~s~kgG~GKTt~a~~LA~~la~~G~rVllID~D~~~~ 59 (204)
T TIGR01007 16 EIKVLLITSVKPGEGKSTTSANIAVAFAQAGYKTLLIDGDMRNS 59 (204)
T ss_pred CCcEEEEecCCCCCCHHHHHHHHHHHHHhCCCeEEEEeCCCCCh
Confidence 455555553 345788889999999999999999986654433
|
This model describes the capsular exopolysaccharide proteins in bacteria. The exopolysaccharide gene cluster consists of several genes which encode a number of proteins which regulate the exoploysaccharide biosynthesis(EPS). Atleast 13 genes espA to espM in streptococcus species seem to direct the EPS proteins and all of which share high homology. Functional roles were characterized by gene disruption experiments which resulted in exopolysaccharide-deficient phenotypes. |
| >PRK08305 spoVFB dipicolinate synthase subunit B; Reviewed | Back alignment and domain information |
|---|
Probab=82.61 E-value=2.3 Score=36.59 Aligned_cols=45 Identities=11% Similarity=-0.052 Sum_probs=33.1
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHH
Q 012314 2 SRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRV 46 (466)
Q Consensus 2 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~ 46 (466)
+.+||++--.|+.|=+.-...++++|.++||+|.++.++.....+
T Consensus 4 ~~k~IllgVTGsiaa~k~a~~lir~L~k~G~~V~vv~T~aA~~~~ 48 (196)
T PRK08305 4 KGKRIGFGLTGSHCTYDEVMPEIEKLVDEGAEVTPIVSYTVQTTD 48 (196)
T ss_pred CCCEEEEEEcCHHHHHHHHHHHHHHHHhCcCEEEEEECHhHHHHh
Confidence 456777666555444443799999999999999999997665443
|
|
| >PF07015 VirC1: VirC1 protein; InterPro: IPR009744 This family consists of several bacterial VirC1 proteins | Back alignment and domain information |
|---|
Probab=82.57 E-value=5.5 Score=35.17 Aligned_cols=44 Identities=18% Similarity=0.280 Sum_probs=36.2
Q ss_pred EEEEcC-CCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHh
Q 012314 6 VLVMPA-PAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVES 49 (466)
Q Consensus 6 il~~~~-~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~ 49 (466)
|.|+.. ||.|=..-.+.||.+|+++|-.|+++=.++++......
T Consensus 4 Itf~s~KGGaGKTT~~~~LAs~la~~G~~V~lIDaDpn~pl~~W~ 48 (231)
T PF07015_consen 4 ITFASSKGGAGKTTAAMALASELAARGARVALIDADPNQPLAKWA 48 (231)
T ss_pred EEEecCCCCCcHHHHHHHHHHHHHHCCCeEEEEeCCCCCcHHHHH
Confidence 444444 45599999999999999999999999999988876543
|
In Agrobacterium tumefaciens, a cis-active 24-base-pair sequence adjacent to the right border of the T-DNA, called overdrive, stimulates tumour formation by increasing the level of T-DNA processing. It is thought that the virC operon, which enhances T-DNA processing probably, does so because the VirC1 protein interacts with overdrive. It has now been shown that the virC1 gene product binds to overdrive but not to the right border of T-DNA []. |
| >PRK12342 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=81.86 E-value=16 Score=33.03 Aligned_cols=95 Identities=13% Similarity=0.039 Sum_probs=52.5
Q ss_pred HHHHHHHHHhCCCEEEEEeCCcch--HH-H-HHhhhcCCCCCCCeEEEecCCCCCCCCCCccHHHHHHHHHHhccHHHHH
Q 012314 20 LLEFSQCLAKHGFRVTFVNTDYNH--KR-V-VESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKLIEKCLQVMPGKLEE 95 (466)
Q Consensus 20 ~l~la~~L~~rGh~Vt~~~~~~~~--~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (466)
.++-|-+|++.|.+||+++-.+.. .. + ++...-- ....+... ++.+... + .+ ..-..+..
T Consensus 40 AlE~AlrLk~~g~~Vtvls~Gp~~a~~~~l~r~alamG--aD~avli~--d~~~~g~----D------~~--ata~~La~ 103 (254)
T PRK12342 40 AIEAASQLATDGDEIAALTVGGSLLQNSKVRKDVLSRG--PHSLYLVQ--DAQLEHA----L------PL--DTAKALAA 103 (254)
T ss_pred HHHHHHHHhhcCCEEEEEEeCCChHhHHHHHHHHHHcC--CCEEEEEe--cCccCCC----C------HH--HHHHHHHH
Confidence 466677787778999999987643 22 3 3232100 00111111 1111111 1 11 01223444
Q ss_pred HHHHHhcCCCCCccEEEeCCCch------hHHHHHHHcCCceEEecc
Q 012314 96 LIEEINSREDEKIDCFIADGNIG------WSMEIAKKMNVRGAVFWP 136 (466)
Q Consensus 96 ll~~l~~~~~~~~DlvV~D~~~~------~~~~~A~~lgiP~v~~~~ 136 (466)
.++. ..||+|++-..+. -+..+|+.||+|++.+..
T Consensus 104 ~i~~------~~~DLVl~G~~s~D~~tgqvg~~lA~~Lg~P~vt~v~ 144 (254)
T PRK12342 104 AIEK------IGFDLLLFGEGSGDLYAQQVGLLLGELLQLPVINAVS 144 (254)
T ss_pred HHHH------hCCCEEEEcCCcccCCCCCHHHHHHHHhCCCcEeeEE
Confidence 5554 4599999865433 488999999999998764
|
|
| >PRK06849 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=81.77 E-value=9.3 Score=37.20 Aligned_cols=36 Identities=17% Similarity=0.253 Sum_probs=26.8
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcc
Q 012314 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYN 42 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~ 42 (466)
+++|++.. +.....+.+++.|.++||+|+++.....
T Consensus 4 ~~~VLI~G----~~~~~~l~iar~l~~~G~~Vi~~d~~~~ 39 (389)
T PRK06849 4 KKTVLITG----ARAPAALELARLFHNAGHTVILADSLKY 39 (389)
T ss_pred CCEEEEeC----CCcHHHHHHHHHHHHCCCEEEEEeCCch
Confidence 45666653 2222588999999999999999988653
|
|
| >COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=81.74 E-value=4.1 Score=32.88 Aligned_cols=48 Identities=29% Similarity=0.314 Sum_probs=41.3
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHH
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVE 48 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~ 48 (466)
|++.||++.+.+..||-.-.--+++.|+..|.+|.....-...+.+..
T Consensus 10 g~rprvlvak~GlDgHd~gakvia~~l~d~GfeVi~~g~~~tp~e~v~ 57 (143)
T COG2185 10 GARPRVLVAKLGLDGHDRGAKVIARALADAGFEVINLGLFQTPEEAVR 57 (143)
T ss_pred CCCceEEEeccCccccccchHHHHHHHHhCCceEEecCCcCCHHHHHH
Confidence 578999999999889999999999999999999998887665554433
|
|
| >PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides | Back alignment and domain information |
|---|
Probab=81.36 E-value=5.7 Score=34.09 Aligned_cols=93 Identities=15% Similarity=0.160 Sum_probs=49.6
Q ss_pred CCCccCHHHHHHHHHHHHhC--CCEEEEEeCCcchHH-HHHhhhcCCCCCCCeEEEecCCCCCCCCCCccHHHHHHHHHH
Q 012314 11 APAQGHVIPLLEFSQCLAKH--GFRVTFVNTDYNHKR-VVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKLIEKCLQ 87 (466)
Q Consensus 11 ~~~~GH~~p~l~la~~L~~r--Gh~Vt~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (466)
..+-|-+.....|+++|.++ |+.|.+-++...... +.+.. .+.+....+|-+
T Consensus 28 a~SvGE~~a~~~Li~~l~~~~p~~~illT~~T~tg~~~~~~~~------~~~v~~~~~P~D------------------- 82 (186)
T PF04413_consen 28 AASVGEVNAARPLIKRLRKQRPDLRILLTTTTPTGREMARKLL------PDRVDVQYLPLD------------------- 82 (186)
T ss_dssp -SSHHHHHHHHHHHHHHTT---TS-EEEEES-CCHHHHHHGG-------GGG-SEEE---S-------------------
T ss_pred ECCHHHHHHHHHHHHHHHHhCCCCeEEEEecCCchHHHHHHhC------CCCeEEEEeCcc-------------------
Confidence 35569999999999999987 899998888554443 32221 012223323411
Q ss_pred hccHHHHHHHHHHhcCCCCCccEEEeCCCch--hHHHHHHHcCCceEEec
Q 012314 88 VMPGKLEELIEEINSREDEKIDCFIADGNIG--WSMEIAKKMNVRGAVFW 135 (466)
Q Consensus 88 ~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~--~~~~~A~~lgiP~v~~~ 135 (466)
....++.+++. .+||++|.-.... -....|++.|||.+.+.
T Consensus 83 -~~~~~~rfl~~------~~P~~~i~~EtElWPnll~~a~~~~ip~~LvN 125 (186)
T PF04413_consen 83 -FPWAVRRFLDH------WRPDLLIWVETELWPNLLREAKRRGIPVVLVN 125 (186)
T ss_dssp -SHHHHHHHHHH------H--SEEEEES----HHHHHH-----S-EEEEE
T ss_pred -CHHHHHHHHHH------hCCCEEEEEccccCHHHHHHHhhcCCCEEEEe
Confidence 34456777777 6789988766555 45557788899999875
|
Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B. |
| >PF02441 Flavoprotein: Flavoprotein; InterPro: IPR003382 This entry contains a diverse range of flavoprotein enzymes, including epidermin biosynthesis protein, EpiD, which has been shown to be a flavoprotein that binds FMN [] | Back alignment and domain information |
|---|
Probab=81.19 E-value=2.5 Score=33.78 Aligned_cols=45 Identities=16% Similarity=0.166 Sum_probs=35.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHh
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVES 49 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~ 49 (466)
+||++...++.+=+. ...+.++|.++|++|.++.++.....+...
T Consensus 1 k~i~l~vtGs~~~~~-~~~~l~~L~~~g~~v~vv~S~~A~~~~~~~ 45 (129)
T PF02441_consen 1 KRILLGVTGSIAAYK-APDLLRRLKRAGWEVRVVLSPSAERFVTPE 45 (129)
T ss_dssp -EEEEEE-SSGGGGG-HHHHHHHHHTTTSEEEEEESHHHHHHSHHH
T ss_pred CEEEEEEECHHHHHH-HHHHHHHHhhCCCEEEEEECCcHHHHhhhh
Confidence 467777777765555 999999999999999999998777766554
|
This enzyme catalyzes the removal of two reducing equivalents from the cysteine residue of the C-terminal meso-lanthionine of epidermin to form a --C==C-- double bond. This family also includes the B chain of dipicolinate synthase a small polar molecule that accumulates to high concentrations in bacterial endospores, and is thought to play a role in spore heat resistance, or the maintenance of heat resistance []. Dipicolinate synthase catalyses the formation of dipicolinic acid from dihydroxydipicolinic acid. This family also includes phenylacrylic acid decarboxylase 4.1.1 from EC [].; GO: 0003824 catalytic activity; PDB: 3QJG_L 1G63_G 1G5Q_L 1P3Y_1 1QZU_A 1E20_A 1MVN_A 1MVL_A 3ZQU_A 2EJB_A .... |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=80.80 E-value=16 Score=38.86 Aligned_cols=110 Identities=15% Similarity=0.066 Sum_probs=65.7
Q ss_pred eecccchh---hhhcCCCccccee---ccCCc-hhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCCCCcC
Q 012314 331 MISWAPQL---RVLNHPSIACFLS---HCGWN-STMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIIT 403 (466)
Q Consensus 331 ~~~~~p~~---~ll~~~~~~~~i~---hgG~~-s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~ 403 (466)
+.+++++. .++..+++ ++. .-|.| ++.|++++|+|-...|...+--.-+. + +.-|+.+++ .+
T Consensus 346 ~~~~~~~~~l~~ly~~aDv--~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~---~-l~~~llv~P-----~d 414 (726)
T PRK14501 346 FYRSLPFEELVALYRAADV--ALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAA---E-LAEALLVNP-----ND 414 (726)
T ss_pred EeCCCCHHHHHHHHHhccE--EEecccccccCcccceEEEEcCCCCceEEEecccchhH---H-hCcCeEECC-----CC
Confidence 33677765 46666776 664 33554 66999999765222222221111111 2 234777754 57
Q ss_pred HHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhc
Q 012314 404 REEIKNKVDQVLGNQ--DFKARALELKEKAMSSVREGGSSYKTFQNFLQWVKTNA 456 (466)
Q Consensus 404 ~~~l~~~i~~ll~~~--~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~~ 456 (466)
.++++++|.++|+.+ +.+++..++.+.+.. -+...-++++++.+.+..
T Consensus 415 ~~~la~ai~~~l~~~~~e~~~r~~~~~~~v~~-----~~~~~w~~~~l~~l~~~~ 464 (726)
T PRK14501 415 IEGIAAAIKRALEMPEEEQRERMQAMQERLRR-----YDVHKWASDFLDELREAA 464 (726)
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh-----CCHHHHHHHHHHHHHHHH
Confidence 999999999999753 455555555555432 456666777777666653
|
|
| >PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [] | Back alignment and domain information |
|---|
Probab=80.60 E-value=3.8 Score=34.53 Aligned_cols=23 Identities=13% Similarity=0.147 Sum_probs=17.1
Q ss_pred CHHHHHHHHHHHHh-CCCEEEEEe
Q 012314 16 HVIPLLEFSQCLAK-HGFRVTFVN 38 (466)
Q Consensus 16 H~~p~l~la~~L~~-rGh~Vt~~~ 38 (466)
|.....+|+++|.+ +|.++.+..
T Consensus 1 H~~aA~Al~eal~~~~~~~~~v~v 24 (169)
T PF06925_consen 1 HNSAARALAEALERRRGPDAEVEV 24 (169)
T ss_pred CHHHHHHHHHHHHhhcCCCCEEEE
Confidence 78889999999987 565544443
|
; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process |
| >PRK00346 surE 5'(3')-nucleotidase/polyphosphatase; Provisional | Back alignment and domain information |
|---|
Probab=80.52 E-value=15 Score=33.03 Aligned_cols=100 Identities=13% Similarity=0.115 Sum_probs=54.8
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCccHHHHHHHHHHhccHHHHH
Q 012314 16 HVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKLIEKCLQVMPGKLEE 95 (466)
Q Consensus 16 H~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (466)
|.--+.+|+++|.+. |+|+++.+...+........ ....+++..+..+ ........ ...+.-
T Consensus 12 ~a~Gi~aL~~~l~~~-~~V~VvAP~~~qSg~g~ait----~~~pl~~~~~~~~---~~~v~GTP----------aDcV~~ 73 (250)
T PRK00346 12 HAPGIRALAEALREL-ADVTVVAPDRERSGASHSLT----LTRPLRVEKVDNG---FYAVDGTP----------TDCVHL 73 (250)
T ss_pred CChhHHHHHHHHHhC-CCEEEEeCCCCCcCCccccc----CCCCeEEEEecCC---eEEECCcH----------HHHHHH
Confidence 334488899999988 79999999877665544321 1123444443211 00000000 011121
Q ss_pred HHHHHhcCCCCCccEEEeCCC-------------chhHHHHHHHcCCceEEecc
Q 012314 96 LIEEINSREDEKIDCFIADGN-------------IGWSMEIAKKMNVRGAVFWP 136 (466)
Q Consensus 96 ll~~l~~~~~~~~DlvV~D~~-------------~~~~~~~A~~lgiP~v~~~~ 136 (466)
-+..+.. .+||+||.-.. +..|..-|..+|||.+.++.
T Consensus 74 gl~~l~~---~~pDlVvSGIN~G~N~g~~v~ySGTVgAA~ea~~~GiPaiA~S~ 124 (250)
T PRK00346 74 ALNGLLD---PKPDLVVSGINHGANLGDDVLYSGTVAAAMEGALLGIPAIAVSL 124 (250)
T ss_pred HHHhhcc---CCCCEEEeCCccCCCCCCCeeccHHHHHHHHHHhcCCCeEEEec
Confidence 2222222 47999996532 22455667788999999874
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 466 | ||||
| 2pq6_A | 482 | Crystal Structure Of Medicago Truncatula Ugt85h2- I | 5e-73 | ||
| 2vce_A | 480 | Characterization And Engineering Of The Bifunctiona | 3e-46 | ||
| 3hbf_A | 454 | Structure Of Ugt78g1 Complexed With Myricetin And U | 5e-42 | ||
| 2c1x_A | 456 | Structure And Activity Of A Flavonoid 3-O Glucosylt | 1e-39 | ||
| 2acv_A | 463 | Crystal Structure Of Medicago Truncatula Ugt71g1 Le | 8e-32 | ||
| 2acw_A | 465 | Crystal Structure Of Medicago Truncatula Ugt71g1 Co | 1e-31 | ||
| 2iya_A | 424 | The Crystal Structure Of Macrolide Glycosyltransfer | 3e-07 | ||
| 2o6l_A | 170 | Crystal Structure Of The Udp-Glucuronic Acid Bindin | 3e-05 |
| >pdb|2PQ6|A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights Into The Structural Basis Of A Multifunctional (Iso) Flavonoid Glycosyltransferase Length = 482 | Back alignment and structure |
|
| >pdb|2VCE|A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants Length = 480 | Back alignment and structure |
|
| >pdb|3HBF|A Chain A, Structure Of Ugt78g1 Complexed With Myricetin And Udp Length = 454 | Back alignment and structure |
|
| >pdb|2C1X|A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification Length = 456 | Back alignment and structure |
|
| >pdb|2ACV|A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Length = 463 | Back alignment and structure |
|
| >pdb|2ACW|A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose Length = 465 | Back alignment and structure |
|
| >pdb|2IYA|A Chain A, The Crystal Structure Of Macrolide Glycosyltransferases: A Blueprint For Antibiotic Engineering Length = 424 | Back alignment and structure |
|
| >pdb|2O6L|A Chain A, Crystal Structure Of The Udp-Glucuronic Acid Binding Domain Of The Human Drug Metabolizing Udp-Glucuronosyltransferase 2b7 Length = 170 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10 Length = 482 | Back alignment and structure |
|---|
Score = 528 bits (1362), Expect = 0.0
Identities = 152/476 (31%), Positives = 241/476 (50%), Gaps = 30/476 (6%)
Query: 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLG-EQIH 61
+P V+++P P QGH+ PL + ++ L GF +TFVNT+YNHKR+++S K + G +
Sbjct: 8 KPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFN 67
Query: 62 LVSIPDGMEPWEDR----NDLGKLIEKCLQVMPGKLEELIEEIN-SREDEKIDCFIADGN 116
SIPDG+ P E D+ L + + EL+ +N S + C ++D
Sbjct: 68 FESIPDGLTPMEGDGDVSQDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCC 127
Query: 117 IGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSHGTPMSMQMFRIA---- 172
+ ++++ A++ + +++ SSA S+ V ++ GII
Sbjct: 128 MSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVERGIIPFKDESYLTNGCLETKVDW 187
Query: 173 -PKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAF---- 227
P + +D I I + + N+ ELES+
Sbjct: 188 IPGLKNFRLKD-IVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESDVINALS 246
Query: 228 TTFPELLPIGPLLASNRL-------GNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFT 280
+T P + PIGPL + + + W ED+ CL WL+ ++P SVVYV+FGS T
Sbjct: 247 STIPSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTT 306
Query: 281 ILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRV 340
++ Q E A GL CK+ FLW++RPD+ + + F +A RG + SW PQ +V
Sbjct: 307 VMTPEQLLEFAWGLANCKKSFLWIIRPDLVIGGSVIFSSEFTNEIADRGLIASWCPQDKV 366
Query: 341 LNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGG 400
LNHPSI FL+HCGWNST E + G+P LCWP+F DQ + R+IC+ W++G++ D +
Sbjct: 367 LNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEIDTN--- 423
Query: 401 IITREEIKNKVDQVLGNQD---FKARALELKEKAMSSVREGGSSYKTFQNFLQWVK 453
+ REE+ +++V+ K +A+ELK+KA + R GG SY ++ V
Sbjct: 424 -VKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKVIKDVL 478
|
| >2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A* Length = 456 | Back alignment and structure |
|---|
Score = 510 bits (1316), Expect = e-180
Identities = 121/462 (26%), Positives = 197/462 (42%), Gaps = 26/462 (5%)
Query: 2 SRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTF--VNTDYNHKRVVESLQGKNYLGEQ 59
+ P V V+ P H PLL + LA F +T ++ +
Sbjct: 6 TNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMHTMQCN-- 63
Query: 60 IHLVSIPDGM-EPWEDRNDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIG 118
I I DG+ E + + IE + P + + + + C +AD I
Sbjct: 64 IKSYDISDGVPEGYVFAGRPQEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIW 123
Query: 119 WSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSHGTPMSMQMFRIAPKMPEM 178
++ ++A +M V FW + S++ I ++ + + + I P M ++
Sbjct: 124 FAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIGVSGIQGREDELLNFI-PGMSKV 182
Query: 179 NSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAF----TTFPELL 234
RD I +F +L R + + F NS EL+ + L
Sbjct: 183 RFRDLQE-GIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLKSKLKTYL 241
Query: 235 PIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGL 294
IGP + CL+WL +++P+SVVY+SFG+ T + L+ L
Sbjct: 242 NIGPFNLITP-----PPVVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEAL 296
Query: 295 ELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCG 354
E + PF+W +R PEGF E+ G ++ WAPQ VL H ++ F++HCG
Sbjct: 297 EASRVPFIWSLRDKA----RVHLPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCG 352
Query: 355 WNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQV 414
WNS E V+ G+P +C P+FGDQ LN R + D ++G+ R EGG+ T+ + + DQ+
Sbjct: 353 WNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGV---RIEGGVFTKSGLMSCFDQI 409
Query: 415 LGNQD---FKARALELKEKAMSSVREGGSSYKTFQNFLQWVK 453
L + + L+E A +V GSS + F + V
Sbjct: 410 LSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVS 451
|
| >3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} PDB: 3hbj_A* Length = 454 | Back alignment and structure |
|---|
Score = 503 bits (1298), Expect = e-177
Identities = 115/464 (24%), Positives = 203/464 (43%), Gaps = 32/464 (6%)
Query: 2 SRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTF---VNTDYNHKRVVESLQGKNYLGE 58
+ V V+ P H PLL + +A +VTF T N S +
Sbjct: 12 NLLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSNEF----LP 67
Query: 59 QIHLVSIPDGM-EPWEDRNDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNI 117
I ++ DG+ + + + + I ++ M + +I+E + + I C + D
Sbjct: 68 NIKYYNVHDGLPKGYVSSGNPREPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFF 127
Query: 118 GWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSHGTPMSMQMFRIAPKMPE 177
+ ++A++M+ + W + S+ + + + + P PE
Sbjct: 128 WFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREKTGSKE--VHDVKSIDVL-PGFPE 184
Query: 178 MNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAF----TTFPEL 233
+ + D I D F +L + + N NS + + F L
Sbjct: 185 LKASDLPEGVIKD--IDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNSKFKLL 242
Query: 234 LPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALG 293
L +GP + ++ CL+WLDQ + SSVVY+SFGS + LA
Sbjct: 243 LNVGPFNLTTPQRK-----VSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAES 297
Query: 294 LELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHC 353
LE C PF+W R D ++ P+GF ER +G++++WAPQ+ +L H S+ FL+H
Sbjct: 298 LEECGFPFIWSFRGD----PKEKLPKGFLERTKTKGKIVAWAPQVEILKHSSVGVFLTHS 353
Query: 354 GWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQ 413
GWNS +E + G+P + P+FGDQ LN ++G+ + G++T+E IK ++
Sbjct: 354 GWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGV---DNGVLTKESIKKALEL 410
Query: 414 VLGNQD---FKARALELKEKAMSSVREGGSSYKTFQNFLQWVKT 454
+ ++ + + ++LKE A +V + G+S F +Q V +
Sbjct: 411 TMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVTS 454
|
| >2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A* Length = 463 | Back alignment and structure |
|---|
Score = 452 bits (1164), Expect = e-157
Identities = 113/471 (23%), Positives = 197/471 (41%), Gaps = 35/471 (7%)
Query: 2 SRPRVLVMPAPAQGHVIPLLEFSQCLAKH--GFRVTFVNTDYNHKRVVESLQGKNYL--G 57
++ +PAP GH+ LEF++ L H +T + +S K+ L
Sbjct: 8 KNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADS-YIKSVLASQ 66
Query: 58 EQIHLVSIPDGMEPWEDR-NDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGN 116
QI L+ +P+ P ++ I L+ + ++ I+ I S K+ + D
Sbjct: 67 PQIQLIDLPEVEPPPQELLKSPEFYILTFLESLIPHVKATIKTILSN---KVVGLVLDFF 123
Query: 117 IGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSHGTPMSMQMFRIAPKMP 176
+++ + + +F S+ ++L+ + + + D Q+ I P +
Sbjct: 124 CVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIEEVFDDSD--RDHQLLNI-PGIS 180
Query: 177 EMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAF-------TT 229
+ + I + L R + N+ +LE +
Sbjct: 181 NQVPSNVLPDACFNKDGGYIAYYKLAERFRDTKGI---IVNTFSDLEQSSIDALYDHDEK 237
Query: 230 FPELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTI-LDQVQFQ 288
P + +GPLL N + LKWLD+Q SVV++ FGS + Q +
Sbjct: 238 IPPIYAVGPLLDLKGQPNPKL-DQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIR 296
Query: 289 ELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAA--RGQMISWAPQLRVLNHPSI 346
E+ALGL+ FLW + +PEGF E + +G + WAPQ+ VL H +I
Sbjct: 297 EIALGLKHSGVRFLWSNSAE-----KKVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAI 351
Query: 347 ACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRD---EGGIIT 403
F+SHCGWNS +E + G+P L WP + +Q LN + W VGL D ++
Sbjct: 352 GGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRKGSDVVA 411
Query: 404 REEIKNKVDQVL-GNQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVK 453
EEI+ + ++ + + E+KE + ++V +GGSS + + +
Sbjct: 412 AEEIEKGLKDLMDKDSIVHKKVQEMKEMSRNAVVDGGSSLISVGKLIDDIT 462
|
| >2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A* Length = 480 | Back alignment and structure |
|---|
Score = 445 bits (1148), Expect = e-154
Identities = 130/480 (27%), Positives = 208/480 (43%), Gaps = 38/480 (7%)
Query: 2 SRPRVLVMPAPAQGHVIPLLEFSQCL-AKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQI 60
P V ++P+P GH+IPL+EF++ L HG VTFV + + L I
Sbjct: 5 KTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLDS-LPSSI 63
Query: 61 HLVSIPD-GMEPWEDRNDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGW 119
V +P + + I + +L ++ + + D
Sbjct: 64 SSVFLPPVDLTDLSSSTRIESRISLTVTRSNPELRKVFDSFVE-GGRLPTALVVDLFGTD 122
Query: 120 SMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSHGTPMSMQMFRIAPKMPEMN 179
+ ++A + +V +F+P++A ++ +PKL + + + + P +
Sbjct: 123 AFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSCEFRELTEPLML----PGCVPVA 178
Query: 180 SRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAF-------TTFPE 232
+D F D + L NT+ N+ +ELE A P
Sbjct: 179 GKD-FLDPAQDRKD--DAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPGLDKPP 235
Query: 233 LLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELAL 292
+ P+GPL+ + E+S CLKWLD Q SV+YVSFGS L Q ELAL
Sbjct: 236 VYPVGPLVNIGKQEAK----QTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELAL 291
Query: 293 GLELCKRPFLWVVRPDITTDANDRY------------PEGFQERVAARGQMI-SWAPQLR 339
GL ++ FLWV+R + + P GF ER RG +I WAPQ +
Sbjct: 292 GLADSEQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQ 351
Query: 340 VLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEG 399
VL HPS FL+HCGWNST+E V +GIP + WP + +Q +N + + + L+ +
Sbjct: 352 VLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDD 411
Query: 400 GIITREEIKNKVDQVLGN---QDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVKTNA 456
G++ REE+ V ++ + + + ELKE A +++ G+S K K +
Sbjct: 412 GLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVALKWKAHK 471
|
| >2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} Length = 424 | Back alignment and structure |
|---|
Score = 141 bits (358), Expect = 8e-38
Identities = 72/431 (16%), Positives = 143/431 (33%), Gaps = 41/431 (9%)
Query: 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNY--LGE 58
++ + P GHV P L Q L G RV++ TD +V + G
Sbjct: 10 VTPRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKAA--GATPVVYDS 67
Query: 59 QIHLVSIPDGMEPWEDRNDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIG 118
+ S P+ P + + +G +++ ++V+P + D++ D + D
Sbjct: 68 ILPKESNPEESWPEDQESAMGLFLDEAVRVLPQLEDAY-------ADDRPDLIVYDIASW 120
Query: 119 WSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSHGTPMSMQMFRIAPKMPEM 178
+ + +K ++ P+ A +P + D
Sbjct: 121 PAPVLGRKWDIPFVQLSPTFVAYEGFEEDVPAVQDPTADRGEEAAAPAGTGDAEEGAEAE 180
Query: 179 NSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTFPELLPIGP 238
+ F+ + + + + T +IA N + + T +GP
Sbjct: 181 DGLVRFFTRLSAFLEE---HGVDTPATEFLIAPNRCIVALPRTFQIKGDTVGDNYTFVGP 237
Query: 239 LLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCK 298
+ S+ W V+ ++ GS ++ ++
Sbjct: 238 TYG-------------DRSHQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLD 284
Query: 299 RPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNST 358
+ V + P V W PQL +L + F++H G ST
Sbjct: 285 WHVVLSVGRFVDPADLGEVPPNV--EVH------QWVPQLDIL--TKASAFITHAGMGST 334
Query: 359 MEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQ 418
ME +SN +P + P +Q +N I + +G RD+ +T E+++ V V +
Sbjct: 335 MEALSNAVPMVAVPQIAEQTMNAERIVEL-GLGRHIPRDQ---VTAEKLREAVLAVASDP 390
Query: 419 DFKARALELKE 429
R +++
Sbjct: 391 GVAERLAAVRQ 401
|
| >2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} Length = 430 | Back alignment and structure |
|---|
Score = 132 bits (333), Expect = 2e-34
Identities = 69/430 (16%), Positives = 128/430 (29%), Gaps = 56/430 (13%)
Query: 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQI 60
+ + + A GHV P LE + L G RVT+ +V + G +
Sbjct: 5 TTPAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAAT--GPRPVLYHS 62
Query: 61 HLVSIPDGMEPWEDRNDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWS 120
L E W L +E L L +L + D+ D + D +
Sbjct: 63 TLPGPDADPEAWGS--TLLDNVEPFLNDAIQALPQLADAY---ADDIPDLVLHDITSYPA 117
Query: 121 MEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSHGTPMSMQMFRIAPKMPEMNS 180
+A++ V P+ A + ++ M+R + +
Sbjct: 118 RVLARRWGVPAVSLSPNLVAW----------------KGYEEEVAEPMWR---EPRQTER 158
Query: 181 RDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTFPELLPIGPLL 240
++A W ++ + + + ++ +G
Sbjct: 159 GRAYYARFEAWL-KENGITEHPDTFASHPPRSLVLIPKALQPHADRVDE-DVYTFVGACQ 216
Query: 241 ASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGL-ELCKR 299
G+ A W VV VS GS ++E L
Sbjct: 217 -----GDRAEEGG--------WQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGW 263
Query: 300 PFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTM 359
+ + +T P+ V W PQL +L F++H G +
Sbjct: 264 HLVLQIGRKVTPAELGELPDNV--EVH------DWVPQLAILRQA--DLFVTHAGAGGSQ 313
Query: 360 EGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQD 419
EG++ P + P DQF N + V K +E T + ++ ++ + +
Sbjct: 314 EGLATATPMIAVPQAVDQFGNADMLQGL-GVARKLATEE---ATADLLRETALALVDDPE 369
Query: 420 FKARALELKE 429
R ++
Sbjct: 370 VARRLRRIQA 379
|
| >3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} Length = 402 | Back alignment and structure |
|---|
Score = 116 bits (292), Expect = 9e-29
Identities = 61/434 (14%), Positives = 124/434 (28%), Gaps = 62/434 (14%)
Query: 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNY--LGE 58
M + +L GHV P L LA+ G R+T+V T V + G
Sbjct: 2 MRQRHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKAA--GAEVVLYKS 59
Query: 59 QIHLVSIPDGMEPWEDRNDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNI- 117
+ +P+ ++ + L + ++ L E + D D + D
Sbjct: 60 EFDTFHVPEVVKQEDAETQLHLVY---VRENVAILRAAEEAL---GDNPPDLVVYDVFPF 113
Query: 118 GWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGI-IDSHGTPMSMQMFRIAPKMP 176
+A + + AA+ +G + + + + K
Sbjct: 114 IAGRLLAARWDRPAVRLTGGFAANEHYSLFKELWKSNGQRHPADVEAVHSVLVDLLGKYG 173
Query: 177 EMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTFPELLPI 236
+W I T F +++ +E F +
Sbjct: 174 VDTPVKEYWDEIEGLT--------------------IVFLPKSFQPFAETFD--ERFAFV 211
Query: 237 GPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLEL 296
GP L + + + P V+ VS G+ F+ A
Sbjct: 212 GPTL---TGRDGQPGWQPPRPD--------AP--VLLVSLGNQFNEHPEFFRACAQAFAD 258
Query: 297 CKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWN 356
+ + + P W P VL L+H
Sbjct: 259 TPWHVVMAIGGFLDPAVLGPLPPNV--EAH------QWIPFHSVL--AHARACLTHGTTG 308
Query: 357 STMEGVSNGIPFLCWPYFG-DQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVL 415
+ +E + G+P + P+F + + + + +G D+ + I+ V+++
Sbjct: 309 AVLEAFAAGVPLVLVPHFATEAAPSAERVIEL-GLGSVLRPDQ---LEPASIREAVERLA 364
Query: 416 GNQDFKARALELKE 429
+ + R ++
Sbjct: 365 ADSAVRERVRRMQR 378
|
| >3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* Length = 415 | Back alignment and structure |
|---|
Score = 112 bits (283), Expect = 1e-27
Identities = 65/437 (14%), Positives = 126/437 (28%), Gaps = 71/437 (16%)
Query: 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQI 60
M+ +L++ + G ++P L L + G RV++V T V + G
Sbjct: 20 MAH--LLIVNVASHGLILPTLTVVTELVRRGHRVSYV-TAGGFAEPVRAA------G--A 68
Query: 61 HLVSIP------DGMEPWEDRNDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIAD 114
+V D E + + + L+ L E + + + D + D
Sbjct: 69 TVVPYQSEIIDADAAEVFGSDDLGVRPHLMYLRENVSVLRATAEAL---DGDVPDLVLYD 125
Query: 115 GNI-GWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSHGTPMSMQMFR-IA 172
+A + + A++ F + G ID P+ R +
Sbjct: 126 DFPFIAGQLLAARWRRPAVRLSAAFASNEHYSFSQDMVTLAGTIDPLDLPVFRDTLRDLL 185
Query: 173 PKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTFPE 232
+ S W H+ F +++ + F
Sbjct: 186 AEHGLSRSVVDCWNHVEQLN--------------------LVFVPKAFQIAGDTFD--DR 223
Query: 233 LLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELAL 292
+ +GP R + + W VV VS G+ F++ A
Sbjct: 224 FVFVGPCFDDRR--------FLGE-----WTRPADDLPVVLVSLGTTFNDRPGFFRDCAR 270
Query: 293 GLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSH 352
+ + + + A P W P ++VL ++H
Sbjct: 271 AFDGQPWHVVMTLGGQVDPAALGDLPPNV--EAH------RWVPHVKVL--EQATVCVTH 320
Query: 353 CGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVD 412
G + ME + G P + P D R + +G ++ + + V
Sbjct: 321 GGMGTLMEALYWGRPLVVVPQSFDVQPMARRVDQL-GLGAVLPGEK---ADGDTLLAAVG 376
Query: 413 QVLGNQDFKARALELKE 429
V + AR ++
Sbjct: 377 AVAADPALLARVEAMRG 393
|
| >2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} Length = 170 | Back alignment and structure |
|---|
Score = 92.3 bits (230), Expect = 3e-22
Identities = 34/168 (20%), Positives = 70/168 (41%), Gaps = 17/168 (10%)
Query: 261 KWLDQQQPSSVVYVSFGS-FTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPE 319
++ + VV S GS + + + + +A L + LW R+
Sbjct: 13 DFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLW------------RFDG 60
Query: 320 GFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFL 379
+ + ++ W PQ +L HP F++H G N E + +GIP + P F DQ
Sbjct: 61 NKPDTLGLNTRLYKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPD 120
Query: 380 NERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALEL 427
N ++ ++ D + ++ ++ N + +V+ + +K ++L
Sbjct: 121 NIAHMKAR-GAAVRVDFNT---MSSTDLLNALKRVINDPSYKENVMKL 164
|
| >3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* Length = 412 | Back alignment and structure |
|---|
Score = 95.1 bits (237), Expect = 2e-21
Identities = 76/445 (17%), Positives = 129/445 (28%), Gaps = 80/445 (17%)
Query: 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESL------QGKNYLGE 58
RVL GH PLL + G VTF + + L G
Sbjct: 22 RVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGE-GFAGTLRKLGFEPVATGMPVFDG 80
Query: 59 QIHLVSIPDGMEPWEDRN--DLGKLIEKCLQVMPGK--LEELIEEINSREDEKIDCFIAD 114
+ + I + E L +L + + + +EL I E + D + +
Sbjct: 81 FLAALRIRFDTDSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVI---ERLRPDLVVQE 137
Query: 115 GNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSHGTPMSMQMFRIAPK 174
A AL IP + HG
Sbjct: 138 -----ISNYG--------------AGLAALKAGIPTI-------CHGVG-----RDTPDD 166
Query: 175 MPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTFPELL 234
+ + +Q++ DL L+ F P
Sbjct: 167 LTRS-----IEEEVRGL-AQRLGLDLPPGRIDGFGNPFIDIF--PPSLQEPEFRARPRRH 218
Query: 235 PIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGL 294
+ P+ + W L D +P +VY++ G+ + + GL
Sbjct: 219 ELRPVPFA---EQGDLPAW------LSSRDTARP--LVYLTLGTSSGGTVEVLRAAIDGL 267
Query: 295 ELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCG 354
L P + P R+ SW PQ +L P + + H G
Sbjct: 268 AGLDADVLVASGPSLDVSGLGEVPANV--RLE------SWVPQAALL--PHVDLVVHHGG 317
Query: 355 WNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQV 414
+T+ + G+P L +P+ GD F N + + G D I+ + + ++
Sbjct: 318 SGTTLGALGAGVPQLSFPWAGDSFANAQAVAQA-GAGDHLLPDN---ISPDSVSGAAKRL 373
Query: 415 LGNQDFKARALELKE--KAMSSVRE 437
L + ++A A + AM E
Sbjct: 374 LAEESYRAGARAVAAEIAAMPGPDE 398
|
| >3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* Length = 391 | Back alignment and structure |
|---|
Score = 87.9 bits (218), Expect = 4e-19
Identities = 31/178 (17%), Positives = 56/178 (31%), Gaps = 12/178 (6%)
Query: 262 WLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGF 321
W + + V + G + L + P + V I R
Sbjct: 211 WGAARTSARRVCICMGRMVLNATGPAPLLRAVAAATELPGVEAV---IAVPPEHRALLT- 266
Query: 322 QERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNE 381
+ ++ P L + + G + GIP L P + DQF
Sbjct: 267 --DLPDNARIAESVPLNLFL--RTCELVICAGGSGTAFTATRLGIPQLVLPQYFDQFDYA 322
Query: 382 RYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALELKEK--AMSSVRE 437
R + G+ ++ E+ + + VLG+ F A A++L ++ AM
Sbjct: 323 RNLAAA-GAGICLPDEQAQ-SDHEQFTDSIATVLGDTGFAAAAIKLSDEITAMPHPAA 378
|
| >2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} Length = 441 | Back alignment and structure |
|---|
Score = 84.1 bits (208), Expect = 1e-17
Identities = 59/460 (12%), Positives = 129/460 (28%), Gaps = 83/460 (18%)
Query: 5 RVLVMPAPAQGHVIPLL-------------------EFSQCLAKHGFRVTFVNTDYN-HK 44
RV+ ++ H+ L+ ++ + G V TD +
Sbjct: 22 RVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITAAGLTAVPVGTDVDLVD 81
Query: 45 RVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKLIEKCLQVMPGK---LEELIEEIN 101
+ + + WE + ++ + +E ++
Sbjct: 82 FMTHAGHDIIDYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFC- 140
Query: 102 SREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSHG 161
+ D I + + A A +
Sbjct: 141 --RKWRPDLVIWEPLTFAAPIAAAVTGTPHARLLWGPDIT-------------------- 178
Query: 162 TPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIA-VNFHFCNSTY 220
T + P PE + D A WT +K + + ++ +
Sbjct: 179 TRARQNFLGLLPDQPEEHRED-PLAEWLTWTLEK--YGGPAFDEEVVVGQWTIDPAPAAI 235
Query: 221 ELESEAFTTFPELLP-IGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSF 279
L++ T + GP + +WL + V ++ G
Sbjct: 236 RLDTGLKTVGMRYVDYNGPSVVP------------------EWLHDEPERRRVCLTLGIS 277
Query: 280 TILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLR 339
+ + + + L ++ T DA + + + + P
Sbjct: 278 SRENSIGQVSIEELLGAVGDVDAEII---ATFDAQQLEGVA---NIPDNVRTVGFVPMHA 331
Query: 340 VLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEG 399
+L P+ A + H G S +G+P + P D + + +F G+ E
Sbjct: 332 LL--PTCAATVHHGGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQEF-GAGIALPVPE- 387
Query: 400 GIITREEIKNKVDQVLGNQDFKARALELKEK--AMSSVRE 437
+T ++++ V +VL + +A A +++ A S E
Sbjct: 388 --LTPDQLRESVKRVLDDPAHRAGAARMRDDMLAEPSPAE 425
|
| >3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} PDB: 3h4i_A* 1pn3_A* 1pnv_A* Length = 404 | Back alignment and structure |
|---|
Score = 83.0 bits (205), Expect = 2e-17
Identities = 60/433 (13%), Positives = 119/433 (27%), Gaps = 77/433 (17%)
Query: 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVS 64
VL+ ++G PL+ + L + G ++ + +V
Sbjct: 2 GVLITGCGSRGDTEPLVALAARLRELGADARMC-LPPDYVERCAE--------VGVPMVP 52
Query: 65 IPDGMEPWEDRNDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIA 124
+ + + G+L +V+ + E +++ E D + G + ++
Sbjct: 53 VGRAVRAGA--REPGELPPGAAEVVTEVVAEWFDKV-PAAIEGCDAVVTTGLLPAAV--- 106
Query: 125 KKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSHGTPMSM--QMFRIAPKMPEMNSRD 182
+ S+A IP + +P + + + M +
Sbjct: 107 -------------AVRSMAEKLGIP------YRYTVLSPDHLPSEQSQAERDMYNQGADR 147
Query: 183 CFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTFPELLPIGPLLAS 242
F + + L + P L P+ P
Sbjct: 148 LFGDAVNSHRAS---IGLPPVEHLYDYGYT----------DQPWLAADPVLSPLRPTDLG 194
Query: 243 NRLGNTAGYFWCEDS-----NCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELC 297
G + D +L P VYV FGS + +A+ E
Sbjct: 195 TV---QTGAWILPDQRPLSAELEGFLRAGSP--PVYVGFGS--GPAPAEAARVAI--EAV 245
Query: 298 KRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNS 357
+ VV +++ + ++ + +A + H G +
Sbjct: 246 RAQGRRVV---LSSGWAGLGRIDEGDDC----LVVGEVNHQVLF--GRVAAVVHHGGAGT 296
Query: 358 TMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGN 417
T G P + P DQ + D VG+ D T E + + L
Sbjct: 297 TTAVTRAGAPQVVVPQKADQPYYAGRVADL-GVGVAHDGPT---PTVESLSAALATAL-T 351
Query: 418 QDFKARALELKEK 430
+ARA +
Sbjct: 352 PGIRARAAAVAGT 364
|
| >2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} Length = 384 | Back alignment and structure |
|---|
Score = 79.8 bits (197), Expect = 2e-16
Identities = 32/180 (17%), Positives = 58/180 (32%), Gaps = 17/180 (9%)
Query: 262 WLDQQQPSSVVYVSFGSFTILDQVQFQELALG--LELCKRPFLWVVRPDITTDANDRYPE 319
W+ + V V+ GS + L + R + ++ + E
Sbjct: 203 WMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDVELI---VAAPDTV--AE 257
Query: 320 GFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFL 379
+ V + W P V P+ + H G ST+ G+S G+P L P
Sbjct: 258 ALRAEVPQA--RVGWTPLDVVA--PTCDLLVHHAGGVSTLTGLSAGVPQLLIPKGSVLEA 313
Query: 380 NERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALELKEK--AMSSVRE 437
R + D+ + E + E I + ++ + RA +L + M
Sbjct: 314 PARRVADY-GAAIALLPGE---DSTEAIADSCQELQAKDTYARRAQDLSREISGMPLPAT 369
|
| >1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 Length = 416 | Back alignment and structure |
|---|
Score = 79.9 bits (197), Expect = 2e-16
Identities = 59/445 (13%), Positives = 120/445 (26%), Gaps = 69/445 (15%)
Query: 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVS 64
RVL+ +G V + + L G + + + + G + V
Sbjct: 2 RVLLSVCGTRGDVEIGVALADRLKALGVQTRMC-APPAAEERLAEV------G--VPHVP 52
Query: 65 IPDGMEPWEDRNDLGKLIEKCLQVMPGKLEELIEEINS--REDEKIDCFIADGNIGWSME 122
+ E+ ++ +E + + +
Sbjct: 53 VGLPQHMMLQEGMPPPPPEEEQRLAAMTVEMQFDAVPGAAEGCAAVVAVGDLAAATGVRS 112
Query: 123 IAKKMNVR--GAVFWPSSAASVALVFRIPKLIDDGIIDSHGTPMSMQMFRIAPKMPEMNS 180
+A+K+ + +V P AS L + G+ D R+ +
Sbjct: 113 VAEKLGLPFFYSVPSPVYLASPHLPPAYDEPTTPGVTD----------IRVLWEERAARF 162
Query: 181 RDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTFPELLPIGPLL 240
D + + ++ L E P L P+ P +
Sbjct: 163 ADRYGPTLNRRRAEI----GLPPVEDVF---------GYGHGERPLLAADPVLAPLQPDV 209
Query: 241 ASNRLGNTAGYFWCEDSNC------LKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGL 294
+ + G W +L P V++ FGS + ++A+
Sbjct: 210 DAVQTG-----AWLLSDERPLPPELEAFLAAGSP--PVHIGFGSSSGRGIADAAKVAV-- 260
Query: 295 ELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCG 354
E + V+ ++ + ++ I + +A + H
Sbjct: 261 EAIRAQGRRVI---LSRGWTELVLPDDRDDCF----AIDEVNFQALF--RRVAAVIHHGS 311
Query: 355 WNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQV 414
+ G+P L P DQ + +G+ D T E + + V
Sbjct: 312 AGTEHVATRAGVPQLVIPRNTDQPYFAGRVAAL-GIGVAHDGPT---PTFESLSAALTTV 367
Query: 415 LGNQDFKARALELKEKAMSSVREGG 439
L + +ARA + V G
Sbjct: 368 LAP-ETRARAEAVAGM----VLTDG 387
|
| >1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 Length = 415 | Back alignment and structure |
|---|
Score = 77.2 bits (190), Expect = 2e-15
Identities = 66/440 (15%), Positives = 124/440 (28%), Gaps = 74/440 (16%)
Query: 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVS 64
RVL+ ++G PL+ + + G V + + + G + V
Sbjct: 2 RVLLATCGSRGDTEPLVALAVRVRDLGADVRMC-APPDCAERLAEV------G--VPHVP 52
Query: 65 I-PDGMEPWEDRNDLG--KLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSM 121
+ P P + L + + + + +E+ E + G + ++
Sbjct: 53 VGPSARAPIQRAKPLTAEDVRRFTTEAIATQFDEIPAAA-----EGCAAVVTTGLLAAAI 107
Query: 122 E---IAKKMNVR--GAVFWPSSAASVALVFRIPKLIDDGIIDSHGTPMSMQMFRIAPKMP 176
+A+K+ + A PS S + P L + D+ P + +
Sbjct: 108 GVRSVAEKLGIPYFYAFHCPSYVPSPY--YPPPPLGEPSTQDTIDIPAQWERNNQSAYQR 165
Query: 177 EMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTFPELLPI 236
+ IG + IF +A P L P+
Sbjct: 166 YGGLLNSHRDAIGLPPVEDIFTF--GYTDHPWVA------------------ADPVLAPL 205
Query: 237 GPLLASNRLGNTAGYFWCEDSNC------LKWLDQQQPSSVVYVSFGSFTILDQVQFQEL 290
P L W +LD P VY+ FGS + +
Sbjct: 206 QP----TDLDAVQTGAWILPDERPLSPELAAFLDAGPP--PVYLGFGS--LGAPADAVRV 257
Query: 291 ALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFL 350
A+ + + V+ ++ D I + +A +
Sbjct: 258 AI--DAIRAHGRRVI---LSRGWADLVLPDDGADC----FAIGEVNHQVLF--GRVAAVI 306
Query: 351 SHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNK 410
H G +T G P + P DQ + + VG+ D T + +
Sbjct: 307 HHGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAEL-GVGVAHDGPI---PTFDSLSAA 362
Query: 411 VDQVLGNQDFKARALELKEK 430
+ L + ARA +
Sbjct: 363 LATAL-TPETHARATAVAGT 381
|
| >4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* Length = 398 | Back alignment and structure |
|---|
Score = 75.9 bits (187), Expect = 4e-15
Identities = 22/183 (12%), Positives = 60/183 (32%), Gaps = 19/183 (10%)
Query: 262 WLDQQQPSSVVYVSFGSFTILDQVQFQELALGL-----ELCKRPFLWVVRPDITTDANDR 316
W+ +++ + ++FG+ L L L + + VV +
Sbjct: 220 WVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKLGFEVV---VAVSDKLA 276
Query: 317 YPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGD 376
+ P ++ P+ + H G +T+ +S G+P + P +
Sbjct: 277 QTLQ---PLPEGVLAAGQFPLSAIM--PACDVVVHHGGHGTTLTCLSEGVPQVSVPVIAE 331
Query: 377 QFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALELKEK--AMSS 434
+ + R + G++ ++ E + ++ + + A L + + +
Sbjct: 332 VWDSARLLHAA-GAGVEVPWEQ---AGVESVLAACARIRDDSSYVGNARRLAAEMATLPT 387
Query: 435 VRE 437
+
Sbjct: 388 PAD 390
|
| >3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* Length = 398 | Back alignment and structure |
|---|
Score = 72.9 bits (179), Expect = 3e-14
Identities = 32/179 (17%), Positives = 63/179 (35%), Gaps = 19/179 (10%)
Query: 262 WLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGF 321
L V ++ G+ L + + V + D P G
Sbjct: 225 RLPPVPARPEVAITMGTIE-LQAFGIGAVEPIIAAAGEVDADFV---LALGDLDISPLG- 279
Query: 322 QERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLN- 380
+ + + W P +L + + H G + M + GIP L P DQF +
Sbjct: 280 --TLPRNVRAVGWTPLHTLL--RTCTAVVHHGGGGTVMTAIDAGIPQLLAPDPRDQFQHT 335
Query: 381 ERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALELKEK--AMSSVRE 437
R +GL D+ + + + +++G++ + A E++E+ A+ + E
Sbjct: 336 AREAVSRRGIGLVSTSDK---VDADL----LRRLIGDESLRTAAREVREEMVALPTPAE 387
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 466 | |||
| 3hbf_A | 454 | Flavonoid 3-O-glucosyltransferase; glycosyltransfe | 100.0 | |
| 2pq6_A | 482 | UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl | 100.0 | |
| 2c1x_A | 456 | UDP-glucose flavonoid 3-O glycosyltransferase; WIN | 100.0 | |
| 2vch_A | 480 | Hydroquinone glucosyltransferase; glycosyltransfer | 100.0 | |
| 2acv_A | 463 | Triterpene UDP-glucosyl transferase UGT71G1; glyco | 100.0 | |
| 2iya_A | 424 | OLEI, oleandomycin glycosyltransferase; carbohydra | 100.0 | |
| 4amg_A | 400 | Snogd; transferase, polyketide biosynthesis, GT1 f | 100.0 | |
| 1iir_A | 415 | Glycosyltransferase GTFB; rossmann fold; 1.80A {Am | 100.0 | |
| 3ia7_A | 402 | CALG4; glycosysltransferase, calicheamicin, enediy | 100.0 | |
| 3rsc_A | 415 | CALG2; TDP, enediyne, structural genomics, PSI-2, | 100.0 | |
| 1rrv_A | 416 | Glycosyltransferase GTFD; GT-B, glycosyltransferas | 100.0 | |
| 3h4t_A | 404 | Glycosyltransferase GTFA, glycosyltransferase; van | 100.0 | |
| 2iyf_A | 430 | OLED, oleandomycin glycosyltransferase; antibiotic | 100.0 | |
| 2yjn_A | 441 | ERYCIII, glycosyltransferase; transferase, cytochr | 100.0 | |
| 2p6p_A | 384 | Glycosyl transferase; X-RAY-diffraction,urdamycina | 100.0 | |
| 4fzr_A | 398 | SSFS6; structural genomics, PSI-biology, protein s | 100.0 | |
| 3oti_A | 398 | CALG3; calicheamicin, TDP, structural genomics, PS | 100.0 | |
| 3tsa_A | 391 | SPNG, NDP-rhamnosyltransferase; glycosyltransferas | 100.0 | |
| 3otg_A | 412 | CALG1; calicheamicin, TDP, structural genomics, PS | 100.0 | |
| 3s2u_A | 365 | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape | 99.97 | |
| 2o6l_A | 170 | UDP-glucuronosyltransferase 2B7; drug metabolism, | 99.95 | |
| 1f0k_A | 364 | MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe | 99.88 | |
| 3hbm_A | 282 | UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter je | 99.71 | |
| 2jzc_A | 224 | UDP-N-acetylglucosamine transferase subunit ALG13; | 99.59 | |
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 99.57 | |
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 99.55 | |
| 3ot5_A | 403 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.52 | |
| 3dzc_A | 396 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.51 | |
| 1v4v_A | 376 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t | 99.5 | |
| 1vgv_A | 384 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.45 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 99.44 | |
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 99.43 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 99.42 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 99.4 | |
| 3fro_A | 439 | GLGA glycogen synthase; glycosyltransferase family | 99.4 | |
| 3beo_A | 375 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a | 99.36 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 99.29 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 99.28 | |
| 4hwg_A | 385 | UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc | 99.16 | |
| 2qzs_A | 485 | Glycogen synthase; glycosyl-transferase, GT-B fold | 98.94 | |
| 1rzu_A | 485 | Glycogen synthase 1; glycosyl-transferase, GT-B fo | 98.93 | |
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 98.9 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 98.84 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 98.84 | |
| 2xci_A | 374 | KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci | 98.82 | |
| 2hy7_A | 406 | Glucuronosyltransferase GUMK; glycosyltransferases | 98.58 | |
| 2f9f_A | 177 | First mannosyl transferase (WBAZ-1); alpha-beta pr | 98.57 | |
| 3vue_A | 536 | GBSS-I, granule-bound starch synthase 1, chloropla | 98.16 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 98.12 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 97.9 | |
| 3q3e_A | 631 | HMW1C-like glycosyltransferase; N-glycosylation; 2 | 97.87 | |
| 2bfw_A | 200 | GLGA glycogen synthase; glycosyltransferase family | 97.81 | |
| 3tov_A | 349 | Glycosyl transferase family 9; structural genomics | 97.69 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 97.63 | |
| 1psw_A | 348 | ADP-heptose LPS heptosyltransferase II; structural | 97.6 | |
| 3rhz_A | 339 | GTF3, nucleotide sugar synthetase-like protein; gl | 97.22 | |
| 2gt1_A | 326 | Lipopolysaccharide heptosyltransferase-1; GT-B fol | 96.84 | |
| 1g5t_A | 196 | COB(I)alamin adenosyltransferase; P-loop protein, | 93.29 | |
| 3nb0_A | 725 | Glycogen [starch] synthase isoform 2; glycogen syn | 91.36 | |
| 2phj_A | 251 | 5'-nucleotidase SURE; SURE protein, putative acid | 89.71 | |
| 2yxb_A | 161 | Coenzyme B12-dependent mutase; alpha/beta, structu | 89.7 | |
| 1ccw_A | 137 | Protein (glutamate mutase); coenzyme B12, radical | 89.69 | |
| 3ty2_A | 261 | 5'-nucleotidase SURE; surviVal protein, phosphatas | 89.05 | |
| 2wqk_A | 251 | 5'-nucleotidase SURE; SURE protein, putative acid | 87.44 | |
| 3rg8_A | 159 | Phosphoribosylaminoimidazole carboxylase, PURE PR; | 86.46 | |
| 3qxc_A | 242 | Dethiobiotin synthetase; DTBS, structural genomics | 85.73 | |
| 1xmp_A | 170 | PURE, phosphoribosylaminoimidazole carboxylase; pu | 85.32 | |
| 3fgn_A | 251 | Dethiobiotin synthetase; biotin biosynthesis, BIOD | 85.23 | |
| 3t5t_A | 496 | Putative glycosyltransferase; GTB fold, pseudoglyc | 85.0 | |
| 3iqw_A | 334 | Tail-anchored protein targeting factor GET3; ATPas | 84.43 | |
| 3of5_A | 228 | Dethiobiotin synthetase; structural genomics, cent | 83.18 | |
| 2bw0_A | 329 | 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase | 83.1 | |
| 4dzz_A | 206 | Plasmid partitioning protein PARF; deviant walker | 81.88 | |
| 3oow_A | 166 | Phosphoribosylaminoimidazole carboxylase,catalyic; | 81.3 | |
| 2pn1_A | 331 | Carbamoylphosphate synthase large subunit; ZP_0053 | 81.18 | |
| 2q5c_A | 196 | NTRC family transcriptional regulator; structural | 80.66 | |
| 4dim_A | 403 | Phosphoribosylglycinamide synthetase; structural g | 80.31 | |
| 2iz6_A | 176 | Molybdenum cofactor carrier protein; metal transpo | 80.23 |
| >3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-69 Score=526.30 Aligned_cols=431 Identities=26% Similarity=0.474 Sum_probs=353.1
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCC--CEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCC-CCccHH
Q 012314 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHG--FRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWE-DRNDLG 79 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~la~~L~~rG--h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 79 (466)
+.||+++|+|++||++||+.||+.|+++| +.|||++++.+...+.+.. .....+++|+.+|+++++.. ...+..
T Consensus 13 ~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~---~~~~~~i~~~~ipdglp~~~~~~~~~~ 89 (454)
T 3hbf_A 13 LLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRS---NEFLPNIKYYNVHDGLPKGYVSSGNPR 89 (454)
T ss_dssp CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSS---SCCCTTEEEEECCCCCCTTCCCCSCTT
T ss_pred CCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhccc---ccCCCCceEEecCCCCCCCccccCChH
Confidence 67999999999999999999999999999 9999999976655543221 01135799999999887653 223344
Q ss_pred HHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEEeccchhHHHHHHhhcccccccCccCC
Q 012314 80 KLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDS 159 (466)
Q Consensus 80 ~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~ 159 (466)
..+..+.+.+...+++.++++..+.+.++||||+|.+..|+..+|+++|||++.+++++++....+++++.........
T Consensus 90 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~~~~~~- 168 (454)
T 3hbf_A 90 EPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREKTGSK- 168 (454)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHHHTCCHH-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHHhhcCCC-
Confidence 4555555555666777777653322268999999999999999999999999999999999998888876544321000
Q ss_pred CCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHH----HhhcCCcce
Q 012314 160 HGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEA----FTTFPELLP 235 (466)
Q Consensus 160 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~----~~~~p~v~~ 235 (466)
.........++|+++.+..++++ .++.. .....+.+++.+..+...+++.+++||+++||++. ++.+|++++
T Consensus 169 --~~~~~~~~~~iPg~p~~~~~dlp-~~~~~-~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~~~~~v~~ 244 (454)
T 3hbf_A 169 --EVHDVKSIDVLPGFPELKASDLP-EGVIK-DIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNSKFKLLLN 244 (454)
T ss_dssp --HHTTSSCBCCSTTSCCBCGGGSC-TTSSS-CTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHTTSSCEEE
T ss_pred --ccccccccccCCCCCCcChhhCc-hhhcc-CCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHHhcCCCEEE
Confidence 00112234468999999999998 44433 33445677777777888899999999999999863 445689999
Q ss_pred eccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCC
Q 012314 236 IGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDAND 315 (466)
Q Consensus 236 VGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~ 315 (466)
|||++...... ..+.+.++.+|++.++++++|||+|||....+.+++.+++.+++..+++|||+++.+ ..+
T Consensus 245 vGPl~~~~~~~-----~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~~~~----~~~ 315 (454)
T 3hbf_A 245 VGPFNLTTPQR-----KVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFRGD----PKE 315 (454)
T ss_dssp CCCHHHHSCCS-----CCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEECCSC----HHH
T ss_pred ECCcccccccc-----cccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCc----chh
Confidence 99998754321 123466799999998888999999999988888999999999999999999999865 234
Q ss_pred CCchhHHHHhcCCceeecccchhhhhcCCCcccceeccCCchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEee
Q 012314 316 RYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFD 395 (466)
Q Consensus 316 ~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~ 395 (466)
.+++++.++.++|+++++|+||.++|+|+++++|||||||||++||+++|||+|++|+++||+.||+++++.+|+|+.+.
T Consensus 316 ~lp~~~~~~~~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~l~ 395 (454)
T 3hbf_A 316 KLPKGFLERTKTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVD 395 (454)
T ss_dssp HSCTTHHHHTTTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEECG
T ss_pred cCCHhHHhhcCCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCeeEEec
Confidence 57888888889999999999999999999999999999999999999999999999999999999999998459999997
Q ss_pred cCCCCCcCHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Q 012314 396 RDEGGIITREEIKNKVDQVLGNQ---DFKARALELKEKAMSSVREGGSSYKTFQNFLQWVK 453 (466)
Q Consensus 396 ~~~~~~~~~~~l~~~i~~ll~~~---~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~ 453 (466)
. ..++.++|.++|+++|+++ +||+||+++++++++++.+||+|.+++++||+.+.
T Consensus 396 ~---~~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~i~ 453 (454)
T 3hbf_A 396 N---GVLTKESIKKALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVT 453 (454)
T ss_dssp G---GSCCHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHT
T ss_pred C---CCCCHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHh
Confidence 4 6899999999999999887 89999999999999999999999999999999874
|
| >2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-65 Score=506.46 Aligned_cols=447 Identities=34% Similarity=0.674 Sum_probs=338.9
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCC-CCCeEEEecCCCCCCCC----CC
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYL-GEQIHLVSIPDGMEPWE----DR 75 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~ 75 (466)
|+++||+++|++++||++|++.||++|++|||+|||++++.+...+.+........ ..+++|+.+|++++..+ ..
T Consensus 6 ~~~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~lp~~~~~~~~~ 85 (482)
T 2pq6_A 6 NRKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIPDGLTPMEGDGDVS 85 (482)
T ss_dssp --CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEECCCCC---------
T ss_pred CCCCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCCceEEEECCCCCCCcccccCcc
Confidence 56789999999999999999999999999999999999987766554321000000 13799999998776521 12
Q ss_pred ccHHHHHHHHHHhccHHHHHHHHHHhcC-CCCCccEEEeCCCchhHHHHHHHcCCceEEeccchhHHHHHHhhccccccc
Q 012314 76 NDLGKLIEKCLQVMPGKLEELIEEINSR-EDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDD 154 (466)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~ll~~l~~~-~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~ 154 (466)
.+...++..+.+.+.+.++++++.++++ ++.++||||+|.+..|+..+|+++|||++.++++++.....+.+++.....
T Consensus 86 ~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~ 165 (482)
T 2pq6_A 86 QDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVER 165 (482)
T ss_dssp CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHHHHHT
T ss_pred hhHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHHHHHHHhc
Confidence 3455566666577788999999988642 016899999999999999999999999999999988777766655544333
Q ss_pred CccCCCCC--CCc---cccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHH---
Q 012314 155 GIIDSHGT--PMS---MQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEA--- 226 (466)
Q Consensus 155 ~~~~~~~~--~~~---~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~--- 226 (466)
++.+.... ... ......+|+++.+...+++ .++..........+++....+...+++.+++||+++||++.
T Consensus 166 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~nt~~~le~~~~~~ 244 (482)
T 2pq6_A 166 GIIPFKDESYLTNGCLETKVDWIPGLKNFRLKDIV-DFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESDVINA 244 (482)
T ss_dssp TCSSCSSGGGGTSSGGGCBCCSSTTCCSCBGGGSC-GGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESSCGGGGHHHHHH
T ss_pred CCCCCccccccccccccCccccCCCCCCCchHHCc-hhhccCCcccHHHHHHHHHHHhhccCCEEEEcChHHHhHHHHHH
Confidence 33331110 000 1122245666666666665 44433322344455555555666889999999999999863
Q ss_pred -HhhcCCcceeccccCC-CCCC------CCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhCC
Q 012314 227 -FTTFPELLPIGPLLAS-NRLG------NTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCK 298 (466)
Q Consensus 227 -~~~~p~v~~VGpl~~~-~~~~------~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~ 298 (466)
++..+++++|||++.. +... ......++.+.++.+|++.++++++|||+|||....+.+.+..++.+++..+
T Consensus 245 ~~~~~~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~ 324 (482)
T 2pq6_A 245 LSSTIPSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPEQLLEFAWGLANCK 324 (482)
T ss_dssp HHTTCTTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCCHHHHHHHHHHHHHTT
T ss_pred HHHhCCcEEEEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCCcccCCHHHHHHHHHHHHhcC
Confidence 3444899999999863 2110 0001123455678999999878899999999987778888999999999999
Q ss_pred CCEEEEEcCCCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCcccceeccCCchhhhhhhcCcceeecccccchh
Q 012314 299 RPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQF 378 (466)
Q Consensus 299 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~ 378 (466)
++|+|+++.+...+....+++++.++.++|+++++|+||.++|.|+++++||||||+||++||+++|||+|++|++.||+
T Consensus 325 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~Eal~~GvP~i~~P~~~dQ~ 404 (482)
T 2pq6_A 325 KSFLWIIRPDLVIGGSVIFSSEFTNEIADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQP 404 (482)
T ss_dssp CEEEEECCGGGSTTTGGGSCHHHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHH
T ss_pred CcEEEEEcCCccccccccCcHhHHHhcCCCEEEEeecCHHHHhcCCCCCEEEecCCcchHHHHHHcCCCEEecCcccchH
Confidence 99999997542111112377888888899999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHH-HhhhceeEeecCCCCCcCHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Q 012314 379 LNERYIC-DFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQ---DFKARALELKEKAMSSVREGGSSYKTFQNFLQWVK 453 (466)
Q Consensus 379 ~~a~rv~-~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~---~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~ 453 (466)
.||++++ + +|+|+.+. ..++.++|.++|+++|+|+ +||+||+++++++++++.+||++.+++++||+++.
T Consensus 405 ~na~~~~~~-~G~g~~l~----~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~~ 478 (482)
T 2pq6_A 405 TDCRFICNE-WEIGMEID----TNVKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKVIKDVL 478 (482)
T ss_dssp HHHHHHHHT-SCCEEECC----SSCCHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHH-hCEEEEEC----CCCCHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHH
Confidence 9999997 6 69999995 5699999999999999998 69999999999999999999999999999999874
|
| >2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-62 Score=483.52 Aligned_cols=435 Identities=27% Similarity=0.480 Sum_probs=328.8
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCE--EEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCC-CCccH
Q 012314 2 SRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFR--VTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWE-DRNDL 78 (466)
Q Consensus 2 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~--Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 78 (466)
+++||+++|++++||++|+++||++|++|||+ ||+++++.+...+.+.... ....+++++.++++++... .....
T Consensus 6 ~~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~~--~~~~~i~~~~i~~glp~~~~~~~~~ 83 (456)
T 2c1x_A 6 TNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMH--TMQCNIKSYDISDGVPEGYVFAGRP 83 (456)
T ss_dssp -CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC---------CTTEEEEECCCCCCTTCCCCCCT
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhccccc--cCCCceEEEeCCCCCCCcccccCCh
Confidence 46899999999999999999999999999755 5888886544443322100 0124899999998776542 11223
Q ss_pred HHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEEeccchhHHHHHHhhccccccc-Ccc
Q 012314 79 GKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDD-GII 157 (466)
Q Consensus 79 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~-~~~ 157 (466)
...+..+.+.+...++++++.+.++.+.+|||||+|.+..|+..+|+++|||++.++++++.....+.+.+..... +..
T Consensus 84 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (456)
T 2c1x_A 84 QEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIGVS 163 (456)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHHHHHCSS
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHHHHhccCCc
Confidence 3344444444455666676654321126899999999989999999999999999999988776665544322111 110
Q ss_pred CCCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHH----HhhcCCc
Q 012314 158 DSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEA----FTTFPEL 233 (466)
Q Consensus 158 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~----~~~~p~v 233 (466)
.. ..........+|+++.++.++++ ..+........+..++.+..+...+++.+++|++++||++. ++.+|++
T Consensus 164 ~~--~~~~~~~~~~~pg~~~~~~~~lp-~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~~~~~~~~ 240 (456)
T 2c1x_A 164 GI--QGREDELLNFIPGMSKVRFRDLQ-EGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLKSKLKTY 240 (456)
T ss_dssp CC--TTCTTCBCTTSTTCTTCBGGGSC-TTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHHHSSCE
T ss_pred cc--ccccccccccCCCCCcccHHhCc-hhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHHHHHHHHhcCCCE
Confidence 00 01111223356787777777776 33322222233445555555566789999999999999863 4456899
Q ss_pred ceeccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCC
Q 012314 234 LPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDA 313 (466)
Q Consensus 234 ~~VGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~ 313 (466)
++|||++...... .++.+.++.+|++.++++++|||+|||....+.+++..++.+++..+++|||+++.. .
T Consensus 241 ~~vGpl~~~~~~~-----~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~----~ 311 (456)
T 2c1x_A 241 LNIGPFNLITPPP-----VVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSLRDK----A 311 (456)
T ss_dssp EECCCHHHHC--------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEEECCGG----G
T ss_pred EEecCcccCcccc-----cccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcCCeEEEEECCc----c
Confidence 9999998754321 123445788999998788999999999977778899999999999999999999865 2
Q ss_pred CCCCchhHHHHhcCCceeecccchhhhhcCCCcccceeccCCchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeE
Q 012314 314 NDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLK 393 (466)
Q Consensus 314 ~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~ 393 (466)
.+.+++++.++.++|+++++|+||.++|.|+++++||||||+||++||+++|||+|++|++.||+.||+++++.+|+|+.
T Consensus 312 ~~~l~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~~ 391 (456)
T 2c1x_A 312 RVHLPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVR 391 (456)
T ss_dssp GGGSCTTHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEE
T ss_pred hhhCCHHHHhhcCCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEEE
Confidence 34577888877889999999999999999999999999999999999999999999999999999999999983499999
Q ss_pred eecCCCCCcCHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Q 012314 394 FDRDEGGIITREEIKNKVDQVLGNQ---DFKARALELKEKAMSSVREGGSSYKTFQNFLQWVK 453 (466)
Q Consensus 394 l~~~~~~~~~~~~l~~~i~~ll~~~---~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~ 453 (466)
+.. ..++.++|.++|+++|+|+ +||+||+++++++++++.+||+|.+++++||+.+.
T Consensus 392 l~~---~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~~~ 451 (456)
T 2c1x_A 392 IEG---GVFTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVS 451 (456)
T ss_dssp CGG---GSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHT
T ss_pred ecC---CCcCHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHH
Confidence 974 6799999999999999987 89999999999999999999999999999999873
|
| >2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-61 Score=481.03 Aligned_cols=435 Identities=30% Similarity=0.496 Sum_probs=328.3
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhC-CCEEEEEeCCcc--hHHHHHhhhcCCCCCCCeEEEecCCCCCCC-CCCccH
Q 012314 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKH-GFRVTFVNTDYN--HKRVVESLQGKNYLGEQIHLVSIPDGMEPW-EDRNDL 78 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~la~~L~~r-Gh~Vt~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 78 (466)
++||+++|++++||++|+++||++|++| ||+|||+++..+ ...+.+... ....+++|+.++.+.... ....+.
T Consensus 6 ~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~~---~~~~~i~~~~l~~~~~~~~~~~~~~ 82 (480)
T 2vch_A 6 TPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLD---SLPSSISSVFLPPVDLTDLSSSTRI 82 (480)
T ss_dssp CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC----CCTTEEEEECCCCCCTTSCTTCCH
T ss_pred CcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhcc---ccCCCceEEEcCCCCCCCCCCchhH
Confidence 4799999999999999999999999998 999999999873 344433110 012589999998643211 111233
Q ss_pred HHHHHHHHHhccHHHHHHHHHHhcCCCCCc-cEEEeCCCchhHHHHHHHcCCceEEeccchhHHHHHHhhcccccccCcc
Q 012314 79 GKLIEKCLQVMPGKLEELIEEINSREDEKI-DCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGII 157 (466)
Q Consensus 79 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~-DlvV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~ 157 (466)
...+........+.++++++.+.. . .++ ||||+|.+..|+..+|+++|||++.++++++.....+.++|........
T Consensus 83 ~~~~~~~~~~~~~~l~~ll~~~~~-~-~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (480)
T 2vch_A 83 ESRISLTVTRSNPELRKVFDSFVE-G-GRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSC 160 (480)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHHH-T-TCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHHHCCS
T ss_pred HHHHHHHHHhhhHHHHHHHHHhcc-C-CCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHHHhcCCC
Confidence 333333445567788888887642 1 578 9999999988999999999999999999998877777666643321111
Q ss_pred CCCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHHHhh-------c
Q 012314 158 DSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTT-------F 230 (466)
Q Consensus 158 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~~~~-------~ 230 (466)
+ +... +....+|+++++...+++ ..+.... ......+........+++.+++|++.+||...... .
T Consensus 161 ~---~~~~-~~~~~~Pg~~p~~~~~l~-~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l~~~~~~~ 233 (480)
T 2vch_A 161 E---FREL-TEPLMLPGCVPVAGKDFL-DPAQDRK--DDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPGLDK 233 (480)
T ss_dssp C---GGGC-SSCBCCTTCCCBCGGGSC-GGGSCTT--SHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHHSCCTTC
T ss_pred c---cccc-CCcccCCCCCCCChHHCc-hhhhcCC--chHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHHHhcccCC
Confidence 0 1000 111245777766666666 3332211 12344444445566778899999999999753221 3
Q ss_pred CCcceeccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCC
Q 012314 231 PELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDIT 310 (466)
Q Consensus 231 p~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~ 310 (466)
+++++|||++....... ..+.+.++.+|++.++++++|||||||....+.+++..++.+++.++++|||+++....
T Consensus 234 ~~v~~vGpl~~~~~~~~----~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~ 309 (480)
T 2vch_A 234 PPVYPVGPLVNIGKQEA----KQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRSPSG 309 (480)
T ss_dssp CCEEECCCCCCCSCSCC---------CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEECCCCS
T ss_pred CcEEEEecccccccccc----CccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCCcEEEEECCccc
Confidence 68999999987542210 02356689999999877899999999998788899999999999999999999986421
Q ss_pred C-----------CC-CCCCchhHHHHhcCCceeec-ccchhhhhcCCCcccceeccCCchhhhhhhcCcceeecccccch
Q 012314 311 T-----------DA-NDRYPEGFQERVAARGQMIS-WAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQ 377 (466)
Q Consensus 311 ~-----------~~-~~~~~~~~~~~~~~n~~~~~-~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ 377 (466)
. .. ...+|+++.++..+.++++. |+||.+||+|++|++||||||+||++||+++|||+|++|+++||
T Consensus 310 ~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~P~~~DQ 389 (480)
T 2vch_A 310 IANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQ 389 (480)
T ss_dssp STTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTH
T ss_pred cccccccccccccchhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCEEeccccccc
Confidence 0 01 12477888877777777775 99999999999999999999999999999999999999999999
Q ss_pred hhhHHHH-HHhhhceeEeecCCCCCcCHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Q 012314 378 FLNERYI-CDFWKVGLKFDRDEGGIITREEIKNKVDQVLG---NQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVK 453 (466)
Q Consensus 378 ~~~a~rv-~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~---~~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~ 453 (466)
+.||+++ ++ +|+|+.+...+...++.++|+++|+++|+ +++||+||+++++++++++.+||++.+++++||+.+.
T Consensus 390 ~~na~~l~~~-~G~g~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~~~~~v~~~~ 468 (480)
T 2vch_A 390 KMNAVLLSED-IRAALRPRAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVALKWK 468 (480)
T ss_dssp HHHHHHHHHT-TCCEECCCCCTTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHH-hCeEEEeecccCCccCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence 9999997 56 79999997421237999999999999998 6789999999999999999999999999999999987
Q ss_pred H
Q 012314 454 T 454 (466)
Q Consensus 454 ~ 454 (466)
.
T Consensus 469 ~ 469 (480)
T 2vch_A 469 A 469 (480)
T ss_dssp H
T ss_pred H
Confidence 6
|
| >2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-60 Score=466.41 Aligned_cols=427 Identities=25% Similarity=0.416 Sum_probs=328.0
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhC--CCEEEEEeCCcch-----HHHHHhhhcCCCCCCCeEEEecCCCC-CCCC
Q 012314 2 SRPRVLVMPAPAQGHVIPLLEFSQCLAKH--GFRVTFVNTDYNH-----KRVVESLQGKNYLGEQIHLVSIPDGM-EPWE 73 (466)
Q Consensus 2 ~~~~il~~~~~~~GH~~p~l~la~~L~~r--Gh~Vt~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 73 (466)
+++||+++|+|++||++|+++||++|++| ||+|||+++..+. ..+.+.. ....+++|+.+|++. +..+
T Consensus 8 ~~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~----~~~~~i~~~~lp~~~~~~~~ 83 (463)
T 2acv_A 8 KNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVL----ASQPQIQLIDLPEVEPPPQE 83 (463)
T ss_dssp HCEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHH----CSCTTEEEEECCCCCCCCGG
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhcc----cCCCCceEEECCCCCCCccc
Confidence 35799999999999999999999999999 9999999998753 2232211 112579999999763 3221
Q ss_pred CCccHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEEeccchhHHHHHHhhcccccc
Q 012314 74 DRNDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLID 153 (466)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~ 153 (466)
........+......+.+.++++++.+.. .++||||+|.+..|+..+|+++|||++.++++++.....+.+++....
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~ll~~~~~---~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~ 160 (463)
T 2acv_A 84 LLKSPEFYILTFLESLIPHVKATIKTILS---NKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQI 160 (463)
T ss_dssp GGGSHHHHHHHHHHHTHHHHHHHHHHHCC---TTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSCT
T ss_pred ccCCccHHHHHHHHhhhHHHHHHHHhccC---CCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhhcc
Confidence 11122111333345667788888887622 689999999998899999999999999999999888777777664431
Q ss_pred cCccCCCCCCCcccc---ccccCCC-CCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHHHhh
Q 012314 154 DGIIDSHGTPMSMQM---FRIAPKM-PEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTT 229 (466)
Q Consensus 154 ~~~~~~~~~~~~~~~---~~~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~~~~ 229 (466)
.. + +.. ... ...+|++ +++...+++. .+... .. ....+........+++.+++||+++||+....+
T Consensus 161 ~~--~---~~~-~~~~~~~~~~pg~~~~~~~~~l~~-~~~~~--~~-~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~~ 230 (463)
T 2acv_A 161 EE--V---FDD-SDRDHQLLNIPGISNQVPSNVLPD-ACFNK--DG-GYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDA 230 (463)
T ss_dssp TC--C---CCC-SSGGGCEECCTTCSSCEEGGGSCH-HHHCT--TT-HHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHH
T ss_pred cC--C---CCC-ccccCceeECCCCCCCCChHHCch-hhcCC--ch-HHHHHHHHHHhcccCCEEEECCHHHHhHHHHHH
Confidence 10 0 111 111 2356777 6666556552 22221 12 344444445566788899999999999864332
Q ss_pred -------cCCcceeccccCCCC-CCCCCCCcccCCccchhhhccCCCCeEEEEEecccc-ccCHHHHHHHHHHHHhCCCC
Q 012314 230 -------FPELLPIGPLLASNR-LGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFT-ILDQVQFQELALGLELCKRP 300 (466)
Q Consensus 230 -------~p~v~~VGpl~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~-~~~~~~~~~~~~a~~~~~~~ 300 (466)
.+++++|||++.... ... ...++.+.++.+|++.++++++|||+|||.. ..+.+++..++.+++..+++
T Consensus 231 l~~~~~p~~~v~~vGpl~~~~~~~~~--~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~ 308 (463)
T 2acv_A 231 LYDHDEKIPPIYAVGPLLDLKGQPNP--KLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVR 308 (463)
T ss_dssp HHHHCTTSCCEEECCCCCCSSCCCBT--TBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCE
T ss_pred HHhccccCCcEEEeCCCccccccccc--ccccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCCCc
Confidence 578999999987542 100 0002345678999999888899999999998 77888899999999999999
Q ss_pred EEEEEcCCCCCCCCCCCchhHHHHh--cCCceeecccchhhhhcCCCcccceeccCCchhhhhhhcCcceeecccccchh
Q 012314 301 FLWVVRPDITTDANDRYPEGFQERV--AARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQF 378 (466)
Q Consensus 301 ~i~~~~~~~~~~~~~~~~~~~~~~~--~~n~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~ 378 (466)
|||+++.+ ...+++++.++. ++|+++++|+||.++|.|+++++||||||+||++||+++|||+|++|++.||+
T Consensus 309 ~l~~~~~~-----~~~l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~~dQ~ 383 (463)
T 2acv_A 309 FLWSNSAE-----KKVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQ 383 (463)
T ss_dssp EEEECCCC-----GGGSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTHH
T ss_pred EEEEECCC-----cccCChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccchhhhH
Confidence 99999753 123677787777 88999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHH-HHhhhceeEe-ecCCCC--CcCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Q 012314 379 LNERYI-CDFWKVGLKF-DRDEGG--IITREEIKNKVDQVLG-NQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVK 453 (466)
Q Consensus 379 ~~a~rv-~~~~G~G~~l-~~~~~~--~~~~~~l~~~i~~ll~-~~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~ 453 (466)
.||+++ ++ +|+|+.+ ...+.+ .++.++|.++|+++|+ +++||+||+++++++++++.+||+|.+++++||+++.
T Consensus 384 ~Na~~lv~~-~g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~~ 462 (463)
T 2acv_A 384 LNAFRLVKE-WGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKDSIVHKKVQEMKEMSRNAVVDGGSSLISVGKLIDDIT 462 (463)
T ss_dssp HHHHHHHHT-SCCEEESCSSCCTTCCCCCHHHHHHHHHHHTCTTCTHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-cCeEEEEecccCCCCccccHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhc
Confidence 999995 67 6999999 211124 7899999999999997 4799999999999999999999999999999999874
|
| >2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-46 Score=369.31 Aligned_cols=385 Identities=19% Similarity=0.202 Sum_probs=267.3
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCC-C----C
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWE-D----R 75 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~ 75 (466)
|+++||+|+++++.||++|+++||++|+++||+|+|++++.+.+.+.+. +++++.++..++... . .
T Consensus 10 m~~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~ 80 (424)
T 2iya_A 10 VTPRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKAA---------GATPVVYDSILPKESNPEESWP 80 (424)
T ss_dssp -CCCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH---------TCEEEECCCCSCCTTCTTCCCC
T ss_pred cccceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHhC---------CCEEEecCccccccccchhhcc
Confidence 7788999999999999999999999999999999999999887777665 688888886544321 1 2
Q ss_pred ccHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEEeccchhHHHHHHhhcccccccC
Q 012314 76 NDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDG 155 (466)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~ 155 (466)
.+...++..+.+.......++.+.+++ .+||+||+|.+..|+..+|+.+|||++.+++.+...... ...+.....+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~-~~~~~~~~~~ 156 (424)
T 2iya_A 81 EDQESAMGLFLDEAVRVLPQLEDAYAD---DRPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGF-EEDVPAVQDP 156 (424)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHTTT---SCCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTH-HHHSGGGSCC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhc---cCCCEEEEcCcccHHHHHHHhcCCCEEEEeccccccccc-cccccccccc
Confidence 233344444444444455566666655 789999999987899999999999999988765411111 0000000000
Q ss_pred ccCCCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHH------HhhhccccEEEEcChhhccHHHHhh
Q 012314 156 IIDSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERN------TRAMIAVNFHFCNSTYELESEAFTT 229 (466)
Q Consensus 156 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~vl~~s~~~le~~~~~~ 229 (466)
+.+..... ..|...... ..+....-...........+..+. ......++.++++++++|+++...+
T Consensus 157 ------~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~ 228 (424)
T 2iya_A 157 ------TADRGEEA-AAPAGTGDA-EEGAEAEDGLVRFFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQIKGDTV 228 (424)
T ss_dssp ------CC-----------------------HHHHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTTTSTTGGGC
T ss_pred ------cccccccc-ccccccccc-hhhhccchhHHHHHHHHHHHHHHcCCCCCHHHhccCCCcEEEEcchhhCCCccCC
Confidence 00000000 000000000 000000000000000111111110 0111257889999999999875567
Q ss_pred cCCcceeccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCC
Q 012314 230 FPELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDI 309 (466)
Q Consensus 230 ~p~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~ 309 (466)
.+++++|||+...... ..+|++..+++++|||++||......+.+..+++++++.+.+++|.++...
T Consensus 229 ~~~~~~vGp~~~~~~~-------------~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~ 295 (424)
T 2iya_A 229 GDNYTFVGPTYGDRSH-------------QGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDWHVVLSVGRFV 295 (424)
T ss_dssp CTTEEECCCCCCCCGG-------------GCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCSSEEEEECCTTS
T ss_pred CCCEEEeCCCCCCccc-------------CCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCCcEEEEEECCcC
Confidence 8899999997653210 125766555678999999998755678889999999888899999887541
Q ss_pred CCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCcccceeccCCchhhhhhhcCcceeecccccchhhhHHHHHHhhh
Q 012314 310 TTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWK 389 (466)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G 389 (466)
+ .+.+ +..++|+++.+|+||.++|.++++ ||||||+||++||+++|||+|++|...||+.||+++++ +|
T Consensus 296 ~-------~~~~-~~~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~-~g 364 (424)
T 2iya_A 296 D-------PADL-GEVPPNVEVHQWVPQLDILTKASA--FITHAGMGSTMEALSNAVPMVAVPQIAEQTMNAERIVE-LG 364 (424)
T ss_dssp C-------GGGG-CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHH-TT
T ss_pred C-------hHHh-ccCCCCeEEecCCCHHHHHhhCCE--EEECCchhHHHHHHHcCCCEEEecCccchHHHHHHHHH-CC
Confidence 1 1111 123678999999999999988777 99999999999999999999999999999999999999 69
Q ss_pred ceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 012314 390 VGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALELKEKAMS 433 (466)
Q Consensus 390 ~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~~ 433 (466)
+|+.+.. +.+++++|.++|+++++|+++|++++++++++++
T Consensus 365 ~g~~~~~---~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~ 405 (424)
T 2iya_A 365 LGRHIPR---DQVTAEKLREAVLAVASDPGVAERLAAVRQEIRE 405 (424)
T ss_dssp SEEECCG---GGCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHT
T ss_pred CEEEcCc---CCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHh
Confidence 9999974 6789999999999999999999999999999986
|
| >4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-44 Score=349.13 Aligned_cols=357 Identities=14% Similarity=0.169 Sum_probs=231.8
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCC---------
Q 012314 2 SRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPW--------- 72 (466)
Q Consensus 2 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 72 (466)
+.|||+|+++|+.||++|+++||++|++|||+|||++++.+.... . .++.+..+..+....
T Consensus 21 ~~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~~~-~---------~g~~~~~~~~~~~~~~~~~~~~~~ 90 (400)
T 4amg_A 21 QSMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRAVA-E---------AGLCAVDVSPGVNYAKLFVPDDTD 90 (400)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHHHH-T---------TTCEEEESSTTCCSHHHHSCCC--
T ss_pred CCCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhhHH-h---------cCCeeEecCCchhHhhhccccccc
Confidence 368999999999999999999999999999999999998776543 2 256666654322111
Q ss_pred --C----CCccHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEEeccchhHHHHHHh
Q 012314 73 --E----DRNDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVF 146 (466)
Q Consensus 73 --~----~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~ 146 (466)
. .......+...+.......+.++++.+++ .+||+||+|.+.+++..+|+.+|||++.+...+........
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~~~~~ 167 (400)
T 4amg_A 91 VTDPMHSEGLGEGFFAEMFARVSAVAVDGALRTARS---WRPDLVVHTPTQGAGPLTAAALQLPCVELPLGPADSEPGLG 167 (400)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHHHHHHHH---HCCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCCHHHH
T ss_pred cccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHh---cCCCEEEECcchHHHHHHHHHcCCCceeecccccccccchh
Confidence 0 01111222222323333444555555555 78999999999999999999999999987654332111100
Q ss_pred hcccccccCccCCCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhh-hccccEEEEcChhhccHH
Q 012314 147 RIPKLIDDGIIDSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRA-MIAVNFHFCNSTYELESE 225 (466)
Q Consensus 147 ~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~vl~~s~~~le~~ 225 (466)
.. ..+.......+..-. .......+....+.+...
T Consensus 168 ~~--------------------------------------------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (400)
T 4amg_A 168 AL--------------------------------------------IRRAMSKDYERHGVTGEPTGSVRLTTTPPSVEAL 203 (400)
T ss_dssp HH--------------------------------------------HHHHTHHHHHHTTCCCCCSCEEEEECCCHHHHHT
T ss_pred hH--------------------------------------------HHHHHHHHHHHhCCCcccccchhhcccCchhhcc
Confidence 00 000000000000000 012222333332222111
Q ss_pred H--HhhcCCcceeccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccC--HHHHHHHHHHHHhCCCCE
Q 012314 226 A--FTTFPELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILD--QVQFQELALGLELCKRPF 301 (466)
Q Consensus 226 ~--~~~~p~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~--~~~~~~~~~a~~~~~~~~ 301 (466)
. ....+..+.+.+.... ....+.+|++..+++++|||+|||..... .+.+..+++++++.+.++
T Consensus 204 ~~~~~~~~~~~~~~~~~~~------------~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~ 271 (400)
T 4amg_A 204 LPEDRRSPGAWPMRYVPYN------------GGAVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEF 271 (400)
T ss_dssp SCGGGCCTTCEECCCCCCC------------CCEECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEE
T ss_pred CcccccCCcccCccccccc------------ccccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccCceE
Confidence 0 0011222222222111 12233468888888899999999984433 356888999999999999
Q ss_pred EEEEcCCCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCcccceeccCCchhhhhhhcCcceeecccccchhhhH
Q 012314 302 LWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNE 381 (466)
Q Consensus 302 i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a 381 (466)
+|..++.. ..... ..++|+++.+|+||.++|.|+++ ||||||+||++||+++|||+|++|++.||+.||
T Consensus 272 v~~~~~~~----~~~~~-----~~~~~v~~~~~~p~~~lL~~~~~--~v~h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na 340 (400)
T 4amg_A 272 VLTLGGGD----LALLG-----ELPANVRVVEWIPLGALLETCDA--IIHHGGSGTLLTALAAGVPQCVIPHGSYQDTNR 340 (400)
T ss_dssp EEECCTTC----CCCCC-----CCCTTEEEECCCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCC---CHHHH
T ss_pred EEEecCcc----ccccc-----cCCCCEEEEeecCHHHHhhhhhh--eeccCCccHHHHHHHhCCCEEEecCcccHHHHH
Confidence 99987651 11111 23688899999999999988776 999999999999999999999999999999999
Q ss_pred HHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Q 012314 382 RYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALELKEKAMSSVREGGSSYKTFQNFLQW 451 (466)
Q Consensus 382 ~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~ 451 (466)
+++++ +|+|+.++. .+++. ++|+++|+|++||++|+++++++++. . +.+.+.+.++.
T Consensus 341 ~~v~~-~G~g~~l~~---~~~~~----~al~~lL~d~~~r~~a~~l~~~~~~~---~--~~~~~a~~le~ 397 (400)
T 4amg_A 341 DVLTG-LGIGFDAEA---GSLGA----EQCRRLLDDAGLREAALRVRQEMSEM---P--PPAETAAXLVA 397 (400)
T ss_dssp HHHHH-HTSEEECCT---TTCSH----HHHHHHHHCHHHHHHHHHHHHHHHTS---C--CHHHHHHHHHH
T ss_pred HHHHH-CCCEEEcCC---CCchH----HHHHHHHcCHHHHHHHHHHHHHHHcC---C--CHHHHHHHHHH
Confidence 99999 699999974 55554 56778999999999999999999873 3 33444444444
|
| >1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-43 Score=344.11 Aligned_cols=379 Identities=14% Similarity=0.127 Sum_probs=254.4
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCC-CC-CccHHHH
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPW-ED-RNDLGKL 81 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~ 81 (466)
|||+|++.++.||++|+++||++|++|||+|+|++++.....+.+. +++++.++...... .. .......
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~---------g~~~~~i~~~~~~~~~~~~~~~~~~ 71 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAEV---------GVPHVPVGPSARAPIQRAKPLTAED 71 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHT---------TCCEEECCC-------CCSCCCHHH
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHHc---------CCeeeeCCCCHHHHhhcccccchHH
Confidence 5899999999999999999999999999999999998876666553 68888887543211 00 1111111
Q ss_pred HHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCC-Cchh--HHHHHHHcCCceEEeccchhHHHHHHhhcccccccCccC
Q 012314 82 IEKCLQVMPGKLEELIEEINSREDEKIDCFIADG-NIGW--SMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIID 158 (466)
Q Consensus 82 ~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~-~~~~--~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~ 158 (466)
+..+ +.....++++.+.... .+||+||+|. +..+ +..+|+.+|||++.++.++..... ..
T Consensus 72 ~~~~---~~~~~~~~~~~l~~~~-~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~-----------~~-- 134 (415)
T 1iir_A 72 VRRF---TTEAIATQFDEIPAAA-EGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVPS-----------PY-- 134 (415)
T ss_dssp HHHH---HHHHHHHHHHHHHHHT-TTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSCC-----------SS--
T ss_pred HHHH---HHHHHHHHHHHHHHHh-cCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCCC-----------cc--
Confidence 1111 1122333333333111 7899999997 5668 899999999999998876643100 00
Q ss_pred CCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHH----HHHHHHhh------------hccccEEEEcChhhc
Q 012314 159 SHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFD----LLERNTRA------------MIAVNFHFCNSTYEL 222 (466)
Q Consensus 159 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~------------~~~~~~vl~~s~~~l 222 (466)
+|..... ..+++ ......+. ..+ ....... .+...... .... .+++|++++|
T Consensus 135 ---~p~~~~~-~~~~~--~~~~n~~~-~~~----~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l 202 (415)
T 1iir_A 135 ---YPPPPLG-EPSTQ--DTIDIPAQ-WER----NNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTD-HPWVAADPVL 202 (415)
T ss_dssp ---SCCCC------------CHHHHH-HHH----HHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCS-SCEECSCTTT
T ss_pred ---cCCccCC-ccccc--hHHHHHHH-HHH----HHHHHHHHhHHHHHHHHHHcCCCCCCccccccCCC-CEEEeeChhh
Confidence 0100000 00000 00000000 000 0000000 00011000 1122 6899999999
Q ss_pred cH-HHHhhcCCcceeccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhCCCCE
Q 012314 223 ES-EAFTTFPELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRPF 301 (466)
Q Consensus 223 e~-~~~~~~p~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~ 301 (466)
++ + .+.. ++++|||+..++. ++.+.++.+|++.. +++|||++||.. ...+....+++++++.+.++
T Consensus 203 ~~~~-~~~~-~~~~vG~~~~~~~--------~~~~~~~~~~l~~~--~~~v~v~~Gs~~-~~~~~~~~~~~al~~~~~~~ 269 (415)
T 1iir_A 203 APLQ-PTDL-DAVQTGAWILPDE--------RPLSPELAAFLDAG--PPPVYLGFGSLG-APADAVRVAIDAIRAHGRRV 269 (415)
T ss_dssp SCCC-CCSS-CCEECCCCCCCCC--------CCCCHHHHHHHHTS--SCCEEEECC----CCHHHHHHHHHHHHHTTCCE
T ss_pred cCCC-cccC-CeEeeCCCccCcc--------cCCCHHHHHHHhhC--CCeEEEeCCCCC-CcHHHHHHHHHHHHHCCCeE
Confidence 86 4 2223 8999999987532 23456788999764 469999999976 56788899999999999999
Q ss_pred EEEEcCCCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCcccceeccCCchhhhhhhcCcceeecccccchhhhH
Q 012314 302 LWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNE 381 (466)
Q Consensus 302 i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a 381 (466)
+|+++... .. . . ..++|+++.+|+||.++|. ++++||||||+||++||+++|||+|++|...||..||
T Consensus 270 v~~~g~~~----~~-~-~----~~~~~v~~~~~~~~~~~l~--~~d~~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na 337 (415)
T 1iir_A 270 ILSRGWAD----LV-L-P----DDGADCFAIGEVNHQVLFG--RVAAVIHHGGAGTTHVAARAGAPQILLPQMADQPYYA 337 (415)
T ss_dssp EECTTCTT----CC-C-S----SCGGGEEECSSCCHHHHGG--GSSEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHH
T ss_pred EEEeCCCc----cc-c-c----CCCCCEEEeCcCChHHHHh--hCCEEEeCCChhHHHHHHHcCCCEEECCCCCccHHHH
Confidence 99887541 11 1 1 1356888999999999994 4555999999999999999999999999999999999
Q ss_pred HHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHh
Q 012314 382 RYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVKTN 455 (466)
Q Consensus 382 ~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~ 455 (466)
+++++ +|+|+.++. +.++.++|.++|+++ +|+++++++++++++++. ....+.+.++++.+...
T Consensus 338 ~~l~~-~g~g~~~~~---~~~~~~~l~~~i~~l-~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~i~~~~~~ 401 (415)
T 1iir_A 338 GRVAE-LGVGVAHDG---PIPTFDSLSAALATA-LTPETHARATAVAGTIRT-----DGAAVAARLLLDAVSRE 401 (415)
T ss_dssp HHHHH-HTSEEECSS---SSCCHHHHHHHHHHH-TSHHHHHHHHHHHHHSCS-----CHHHHHHHHHHHHHHTC
T ss_pred HHHHH-CCCcccCCc---CCCCHHHHHHHHHHH-cCHHHHHHHHHHHHHHhh-----cChHHHHHHHHHHHHhc
Confidence 99998 599999974 678999999999999 999999999999988764 33455555556555443
|
| >3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-41 Score=331.07 Aligned_cols=362 Identities=15% Similarity=0.178 Sum_probs=260.1
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCC-----CC
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWE-----DR 75 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 75 (466)
|+++||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+... ++++..++...+... ..
T Consensus 2 m~M~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~---------G~~~~~~~~~~~~~~~~~~~~~ 72 (402)
T 3ia7_A 2 MRQRHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKAA---------GAEVVLYKSEFDTFHVPEVVKQ 72 (402)
T ss_dssp CCCCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHT---------TCEEEECCCGGGTSSSSSSSCC
T ss_pred CCCCEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHHc---------CCEEEecccccccccccccccc
Confidence 8888999999999999999999999999999999999998777777654 688888874333221 12
Q ss_pred ccHHHHHHH-HHHhccHHHHHHHHHHhcCCCCCccEEEeC-CCchhHHHHHHHcCCceEEeccchhHHHHHHhhcccccc
Q 012314 76 NDLGKLIEK-CLQVMPGKLEELIEEINSREDEKIDCFIAD-GNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLID 153 (466)
Q Consensus 76 ~~~~~~~~~-~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D-~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~ 153 (466)
.+....+.. +.......+.++.+.+++ .+||+||+| .+..++..+|+.+|||++.+.+.......... .+...+
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~~-~~~~~~ 148 (402)
T 3ia7_A 73 EDAETQLHLVYVRENVAILRAAEEALGD---NPPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEHYSL-FKELWK 148 (402)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHTT---CCCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTTBCH-HHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhc---cCCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCccccc-cccccc
Confidence 233333333 444444455666666665 899999999 77778999999999999987643331000000 000000
Q ss_pred cCccCCCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHh----------hhcc-ccEEEEcChhhc
Q 012314 154 DGIIDSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTR----------AMIA-VNFHFCNSTYEL 222 (466)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~-~~~vl~~s~~~l 222 (466)
..... .+.........+..... .... .+..++...+++
T Consensus 149 -----------------~~~~~--------------~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~ 197 (402)
T 3ia7_A 149 -----------------SNGQR--------------HPADVEAVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSF 197 (402)
T ss_dssp -----------------HHTCC--------------CGGGSHHHHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCGGG
T ss_pred -----------------ccccc--------------ChhhHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcChHh
Confidence 00000 00000001111111100 1122 277888888888
Q ss_pred cHHHHhhcCCcceeccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhCCCCEE
Q 012314 223 ESEAFTTFPELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRPFL 302 (466)
Q Consensus 223 e~~~~~~~p~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i 302 (466)
+++...+..++.+|||+....... ..|....+++++||+++||......+.+..+++++.+.+.+++
T Consensus 198 ~~~~~~~~~~~~~vGp~~~~~~~~-------------~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (402)
T 3ia7_A 198 QPFAETFDERFAFVGPTLTGRDGQ-------------PGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVV 264 (402)
T ss_dssp STTGGGCCTTEEECCCCCCC-----------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEE
T ss_pred CCccccCCCCeEEeCCCCCCcccC-------------CCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEE
Confidence 877455677899999987543211 1355444567899999999876667789999999998888888
Q ss_pred EEEcCCCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCcccceeccCCchhhhhhhcCcceeeccc-ccchhhhH
Q 012314 303 WVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPY-FGDQFLNE 381 (466)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~-~~DQ~~~a 381 (466)
|.++...+ .+.+. ..++|+++.+|+|+.++|.++++ +|||||+||++||+++|+|+|++|. ..||..|+
T Consensus 265 ~~~g~~~~-------~~~~~-~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a 334 (402)
T 3ia7_A 265 MAIGGFLD-------PAVLG-PLPPNVEAHQWIPFHSVLAHARA--CLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSA 334 (402)
T ss_dssp EECCTTSC-------GGGGC-SCCTTEEEESCCCHHHHHTTEEE--EEECCCHHHHHHHHHTTCCEEECGGGCGGGHHHH
T ss_pred EEeCCcCC-------hhhhC-CCCCcEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCCcccHHHHH
Confidence 88875411 11111 24678999999999999977666 9999999999999999999999999 99999999
Q ss_pred HHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 012314 382 RYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALELKEKAMS 433 (466)
Q Consensus 382 ~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~~ 433 (466)
.++++ .|+|..+.. +.++++.|.++|.++|+|++++++++++++++.+
T Consensus 335 ~~~~~-~g~g~~~~~---~~~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~~ 382 (402)
T 3ia7_A 335 ERVIE-LGLGSVLRP---DQLEPASIREAVERLAADSAVRERVRRMQRDILS 382 (402)
T ss_dssp HHHHH-TTSEEECCG---GGCSHHHHHHHHHHHHHCHHHHHHHHHHHHHHHT
T ss_pred HHHHH-cCCEEEccC---CCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHhh
Confidence 99999 599999975 6789999999999999999999999999999876
|
| >3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-41 Score=332.75 Aligned_cols=375 Identities=15% Similarity=0.173 Sum_probs=264.1
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCCC-----Ccc
Q 012314 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWED-----RND 77 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 77 (466)
++||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+... ++++..++...+.... ...
T Consensus 20 m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~~---------G~~~~~~~~~~~~~~~~~~~~~~~ 90 (415)
T 3rsc_A 20 MAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRAA---------GATVVPYQSEIIDADAAEVFGSDD 90 (415)
T ss_dssp CCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHT---------TCEEEECCCSTTTCCHHHHHHSSS
T ss_pred CCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHhc---------CCEEEeccccccccccchhhcccc
Confidence 67999999999999999999999999999999999998888877664 6899988755443211 001
Q ss_pred HHHHHHH-HHHhccHHHHHHHHHHhcCCCCCccEEEeC-CCchhHHHHHHHcCCceEEeccchhHHHHHHhhcccccccC
Q 012314 78 LGKLIEK-CLQVMPGKLEELIEEINSREDEKIDCFIAD-GNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDG 155 (466)
Q Consensus 78 ~~~~~~~-~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D-~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~ 155 (466)
....+.. +.......++++.+.+++ .+||+||+| ...+++..+|+.+|||++.+.+.......
T Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~l~~---~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~------------ 155 (415)
T 3rsc_A 91 LGVRPHLMYLRENVSVLRATAEALDG---DVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNEH------------ 155 (415)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHSS---SCCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCSS------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc---cCCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccCc------------
Confidence 1111222 333334445566666665 899999999 77778999999999999987643321000
Q ss_pred ccCCCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHH------Hhhhcc-ccEEEEcChhhccHHHHh
Q 012314 156 IIDSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERN------TRAMIA-VNFHFCNSTYELESEAFT 228 (466)
Q Consensus 156 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~-~~~vl~~s~~~le~~~~~ 228 (466)
+..... ..+.... ..+ .. ..........+.... ...... ++..++...+.++++...
T Consensus 156 ------~~~~~~---~~~~~~~----~~p-~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 219 (415)
T 3rsc_A 156 ------YSFSQD---MVTLAGT----IDP-LD--LPVFRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQIAGDT 219 (415)
T ss_dssp ------CCHHHH---HHHHHTC----CCG-GG--CHHHHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTSTTGGG
T ss_pred ------cccccc---ccccccc----CCh-hh--HHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccCCCccc
Confidence 000000 0000000 000 00 000000111111100 011122 278899999999887555
Q ss_pred hcCCcceeccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhCCCCEEEEEcCC
Q 012314 229 TFPELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPD 308 (466)
Q Consensus 229 ~~p~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~ 308 (466)
+..++.++||+...... ...|....+++++||+++||......+.+..+++++++.+.+++|.++..
T Consensus 220 ~~~~~~~vGp~~~~~~~-------------~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~g~~ 286 (415)
T 3rsc_A 220 FDDRFVFVGPCFDDRRF-------------LGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQPWHVVMTLGGQ 286 (415)
T ss_dssp CCTTEEECCCCCCCCGG-------------GCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSSCEEEEECTTT
T ss_pred CCCceEEeCCCCCCccc-------------CcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCCcEEEEEeCCC
Confidence 67789999998764321 11355444567899999999866667789999999998889999988754
Q ss_pred CCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCcccceeccCCchhhhhhhcCcceeecccccchhhhHHHHHHhh
Q 012314 309 ITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFW 388 (466)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~ 388 (466)
.+ .+.+ +..++|+++.+|+|+.++|.++++ ||||||+||++||+++|+|+|++|...||..||.++++ .
T Consensus 287 ~~-------~~~l-~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~-~ 355 (415)
T 3rsc_A 287 VD-------PAAL-GDLPPNVEAHRWVPHVKVLEQATV--CVTHGGMGTLMEALYWGRPLVVVPQSFDVQPMARRVDQ-L 355 (415)
T ss_dssp SC-------GGGG-CCCCTTEEEESCCCHHHHHHHEEE--EEESCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHH-H
T ss_pred CC-------hHHh-cCCCCcEEEEecCCHHHHHhhCCE--EEECCcHHHHHHHHHhCCCEEEeCCcchHHHHHHHHHH-c
Confidence 11 1111 123678999999999999977766 99999999999999999999999999999999999999 5
Q ss_pred hceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHH
Q 012314 389 KVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALELKEKAMSSVREGGSSYKTFQNF 448 (466)
Q Consensus 389 G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~ 448 (466)
|+|+.+.. +++++++|.++|.++|+|++++++++++++++.+ .++..+.++.+
T Consensus 356 g~g~~~~~---~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i 408 (415)
T 3rsc_A 356 GLGAVLPG---EKADGDTLLAAVGAVAADPALLARVEAMRGHVRR----AGGAARAADAV 408 (415)
T ss_dssp TCEEECCG---GGCCHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH----SCHHHHHHHHH
T ss_pred CCEEEccc---CCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHh----cCHHHHHHHHH
Confidence 99999975 6789999999999999999999999999999987 44444444433
|
| >1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-42 Score=337.99 Aligned_cols=378 Identities=14% Similarity=0.046 Sum_probs=255.8
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCC---CCccHHH
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWE---DRNDLGK 80 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 80 (466)
|||+|++.++.||++|+++||++|+++||+|+|++++...+.+... +++++.++....... .......
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~---------g~~~~~~~~~~~~~~~~~~~~~~~~ 71 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAEV---------GVPHVPVGLPQHMMLQEGMPPPPPE 71 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH---------TCCEEECSCCGGGCCCTTSCCCCHH
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHc---------CCeeeecCCCHHHHHhhccccchhH
Confidence 5899999999999999999999999999999999998877767665 688888875422110 0111111
Q ss_pred HHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCC-Cchh--HHHHHHHcCCceEEeccchhHHHHHHhhcccccccCcc
Q 012314 81 LIEKCLQVMPGKLEELIEEINSREDEKIDCFIADG-NIGW--SMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGII 157 (466)
Q Consensus 81 ~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~-~~~~--~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~ 157 (466)
.+..+. .....++++.++... .+||+||+|. +.++ +..+|+.+|||++.++.++..... .+
T Consensus 72 ~~~~~~---~~~~~~~~~~l~~~~-~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~~--~~---------- 135 (416)
T 1rrv_A 72 EEQRLA---AMTVEMQFDAVPGAA-EGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLAS--PH---------- 135 (416)
T ss_dssp HHHHHH---HHHHHHHHHHHHHHT-TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSCC--SS----------
T ss_pred HHHHHH---HHHHHHHHHHHHHHh-cCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCCC--cc----------
Confidence 121121 122344444443111 6899999996 4557 899999999999988766542000 00
Q ss_pred CCCCCCCccccccccCCCCCCCcccccccccCCCCchhHH----HHHHHHHH------------hhhccccEEEEcChhh
Q 012314 158 DSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIF----FDLLERNT------------RAMIAVNFHFCNSTYE 221 (466)
Q Consensus 158 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~------------~~~~~~~~vl~~s~~~ 221 (466)
.| .. .+ ++ ....... +.+......... ........ +..... .++++++++
T Consensus 136 ----~p-~~-----~~-~~-~~~~r~~-n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~ 201 (416)
T 1rrv_A 136 ----LP-PA-----YD-EP-TTPGVTD-IRVLWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGE-RPLLAADPV 201 (416)
T ss_dssp ----SC-CC-----BC-SC-CCTTCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCS-SCEECSCTT
T ss_pred ----cC-CC-----CC-CC-CCchHHH-HHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCchhhhccCC-CeEEccCcc
Confidence 00 00 00 00 0000000 000000000000 00000100 011223 699999999
Q ss_pred ccHHHHhhcCCcceeccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccc-cCHHHHHHHHHHHHhCCCC
Q 012314 222 LESEAFTTFPELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTI-LDQVQFQELALGLELCKRP 300 (466)
Q Consensus 222 le~~~~~~~p~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~-~~~~~~~~~~~a~~~~~~~ 300 (466)
|+++ .+.. ++++|||+..++. ++.+.++.+|++.. +++|||++||... ...+.+..+++++++.+.+
T Consensus 202 l~~~-~~~~-~~~~vG~~~~~~~--------~~~~~~~~~~l~~~--~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~~~~ 269 (416)
T 1rrv_A 202 LAPL-QPDV-DAVQTGAWLLSDE--------RPLPPELEAFLAAG--SPPVHIGFGSSSGRGIADAAKVAVEAIRAQGRR 269 (416)
T ss_dssp TSCC-CSSC-CCEECCCCCCCCC--------CCCCHHHHHHHHSS--SCCEEECCTTCCSHHHHHHHHHHHHHHHHTTCC
T ss_pred ccCC-CCCC-CeeeECCCccCcc--------CCCCHHHHHHHhcC--CCeEEEecCCCCccChHHHHHHHHHHHHHCCCe
Confidence 9865 2222 8999999987642 23456788999765 4699999999743 4566788899999999999
Q ss_pred EEEEEcCCCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCcccceeccCCchhhhhhhcCcceeecccccchhhh
Q 012314 301 FLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLN 380 (466)
Q Consensus 301 ~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~~ 380 (466)
++|+++... .+ . . ..++|+.+++|+||.++|.+ +++||||||+||++||+++|||+|++|...||..|
T Consensus 270 ~v~~~g~~~----~~-~-~----~~~~~v~~~~~~~~~~ll~~--~d~~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~n 337 (416)
T 1rrv_A 270 VILSRGWTE----LV-L-P----DDRDDCFAIDEVNFQALFRR--VAAVIHHGSAGTEHVATRAGVPQLVIPRNTDQPYF 337 (416)
T ss_dssp EEEECTTTT----CC-C-S----CCCTTEEEESSCCHHHHGGG--SSEEEECCCHHHHHHHHHHTCCEEECCCSBTHHHH
T ss_pred EEEEeCCcc----cc-c-c----CCCCCEEEeccCChHHHhcc--CCEEEecCChhHHHHHHHcCCCEEEccCCCCcHHH
Confidence 999987651 11 1 1 23678889999999999955 55599999999999999999999999999999999
Q ss_pred HHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHH-HHHHHh
Q 012314 381 ERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALELKEKAMSSVREGGSSYKTFQNFL-QWVKTN 455 (466)
Q Consensus 381 a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v-~~~~~~ 455 (466)
|+++++ +|+|+.+.. +.++.++|.++|+++ .|++||++++++++++++ .++. .+.+.+ +++...
T Consensus 338 a~~l~~-~g~g~~~~~---~~~~~~~l~~~i~~l-~~~~~~~~~~~~~~~~~~----~~~~--~~~~~i~e~~~~~ 402 (416)
T 1rrv_A 338 AGRVAA-LGIGVAHDG---PTPTFESLSAALTTV-LAPETRARAEAVAGMVLT----DGAA--AAADLVLAAVGRE 402 (416)
T ss_dssp HHHHHH-HTSEEECSS---SCCCHHHHHHHHHHH-TSHHHHHHHHHHTTTCCC----CHHH--HHHHHHHHHHHC-
T ss_pred HHHHHH-CCCccCCCC---CCCCHHHHHHHHHHh-hCHHHHHHHHHHHHHHhh----cCcH--HHHHHHHHHHhcc
Confidence 999999 599999974 678999999999999 999999999999888875 2333 444444 665544
|
| >3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-41 Score=328.02 Aligned_cols=366 Identities=14% Similarity=0.103 Sum_probs=254.2
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCC--CCccHHHH
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWE--DRNDLGKL 81 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 81 (466)
|||+|++.++.||++|+++||++|++|||+|+|++++...+.+... ++++..++....... .......+
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~~~---------g~~~~~l~~~~~~~~~~~~~~~~~~ 71 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAEV---------GVPMVPVGRAVRAGAREPGELPPGA 71 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHHHT---------TCCEEECSSCSSGGGSCTTCCCTTC
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHc---------CCceeecCCCHHHHhccccCCHHHH
Confidence 5799999999999999999999999999999999998888877765 688888764322110 00000011
Q ss_pred HHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCchhH---HHHHHHcCCceEEeccchhHHHHHHhhcccccccCccC
Q 012314 82 IEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWS---MEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIID 158 (466)
Q Consensus 82 ~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~---~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~ 158 (466)
...+.......++++.+.+ .+||+||+|.....+ ..+|+.+|||++.+...+......
T Consensus 72 ~~~~~~~~~~~~~~l~~~~-----~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~-------------- 132 (404)
T 3h4t_A 72 AEVVTEVVAEWFDKVPAAI-----EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSE-------------- 132 (404)
T ss_dssp GGGHHHHHHHHHHHHHHHH-----TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGG--------------
T ss_pred HHHHHHHHHHHHHHHHHHh-----cCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCCh--------------
Confidence 1112222233334444333 369999998655533 789999999999887665420000
Q ss_pred CCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhh-----------ccccEEEEcChhhccHHHH
Q 012314 159 SHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAM-----------IAVNFHFCNSTYELESEAF 227 (466)
Q Consensus 159 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~vl~~s~~~le~~~~ 227 (466)
. + ...+... .......+.....+....+ ...+..+++..+.+.+. .
T Consensus 133 -------~--------~------~~~~~~~-~~~~~~~~~~~~~~~~~~lgl~~~~~~~~~~~~~~~l~~~~~~l~p~-~ 189 (404)
T 3h4t_A 133 -------Q--------S------QAERDMY-NQGADRLFGDAVNSHRASIGLPPVEHLYDYGYTDQPWLAADPVLSPL-R 189 (404)
T ss_dssp -------S--------C------HHHHHHH-HHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTTTSCC-C
T ss_pred -------h--------H------HHHHHHH-HHHHHHHhHHHHHHHHHHcCCCCCcchhhccccCCeEEeeCcceeCC-C
Confidence 0 0 0000000 0000000000011000000 01234567888888765 5
Q ss_pred hhcCCcceeccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhCCCCEEEEEcC
Q 012314 228 TTFPELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRP 307 (466)
Q Consensus 228 ~~~p~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~ 307 (466)
++.+++.++|++..+.. .+.++++.+|++.. +++|||++||... ..+.+..+++++++.+.++||..+.
T Consensus 190 ~~~~~~~~~G~~~~~~~--------~~~~~~l~~~l~~~--~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~~~vv~~~g~ 258 (404)
T 3h4t_A 190 PTDLGTVQTGAWILPDQ--------RPLSAELEGFLRAG--SPPVYVGFGSGPA-PAEAARVAIEAVRAQGRRVVLSSGW 258 (404)
T ss_dssp TTCCSCCBCCCCCCCCC--------CCCCHHHHHHHHTS--SCCEEECCTTSCC-CTTHHHHHHHHHHHTTCCEEEECTT
T ss_pred CCCCCeEEeCccccCCC--------CCCCHHHHHHHhcC--CCeEEEECCCCCC-cHHHHHHHHHHHHhCCCEEEEEeCC
Confidence 67789999998876542 24566788898753 5699999999865 6778999999999999999999875
Q ss_pred CCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCcccceeccCCchhhhhhhcCcceeecccccchhhhHHHHHHh
Q 012314 308 DITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDF 387 (466)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~ 387 (466)
.. .+.. + .++|+++.+|+|+.++|.++++ ||||||+||+.||+++|+|+|++|+..||+.||.++++
T Consensus 259 ~~----~~~~-~-----~~~~v~~~~~~~~~~ll~~~d~--~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~- 325 (404)
T 3h4t_A 259 AG----LGRI-D-----EGDDCLVVGEVNHQVLFGRVAA--VVHHGGAGTTTAVTRAGAPQVVVPQKADQPYYAGRVAD- 325 (404)
T ss_dssp TT----CCCS-S-----CCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHH-
T ss_pred cc----cccc-c-----CCCCEEEecCCCHHHHHhhCcE--EEECCcHHHHHHHHHcCCCEEEcCCcccHHHHHHHHHH-
Confidence 41 1111 1 2688999999999999966555 99999999999999999999999999999999999999
Q ss_pred hhceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Q 012314 388 WKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVKT 454 (466)
Q Consensus 388 ~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~ 454 (466)
.|+|..+.. ..++.++|.++|.++++ ++|+++++++++.+++ ...+.+.++++.+..
T Consensus 326 ~G~g~~l~~---~~~~~~~l~~ai~~ll~-~~~~~~~~~~~~~~~~------~~~~~~~~~i~~~~~ 382 (404)
T 3h4t_A 326 LGVGVAHDG---PTPTVESLSAALATALT-PGIRARAAAVAGTIRT------DGTTVAAKLLLEAIS 382 (404)
T ss_dssp HTSEEECSS---SSCCHHHHHHHHHHHTS-HHHHHHHHHHHTTCCC------CHHHHHHHHHHHHHH
T ss_pred CCCEeccCc---CCCCHHHHHHHHHHHhC-HHHHHHHHHHHHHHhh------hHHHHHHHHHHHHHh
Confidence 599999974 67899999999999998 9999999999887753 344445555555444
|
| >2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-40 Score=323.77 Aligned_cols=366 Identities=17% Similarity=0.178 Sum_probs=251.2
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCCC-----C
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWED-----R 75 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 75 (466)
|+++||+|++.++.||++|+++|+++|+++||+|+++++....+.+.+ .+++++.++...+.... .
T Consensus 5 m~m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~~---------~g~~~~~~~~~~~~~~~~~~~~~ 75 (430)
T 2iyf_A 5 TTPAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAA---------TGPRPVLYHSTLPGPDADPEAWG 75 (430)
T ss_dssp ---CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHT---------TSCEEEECCCCSCCTTSCGGGGC
T ss_pred cccceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHHh---------CCCEEEEcCCcCccccccccccc
Confidence 556799999999999999999999999999999999999887665544 37888888765432211 1
Q ss_pred ccHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEEeccchhHHHHHHhhcccccccC
Q 012314 76 NDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDG 155 (466)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~ 155 (466)
.+....+..+...+...+.++.+.+++ .+||+||+|.+.+++..+|+.+|||++.+++........ ...+.. .
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~-~~~~~~---~ 148 (430)
T 2iyf_A 76 STLLDNVEPFLNDAIQALPQLADAYAD---DIPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGY-EEEVAE---P 148 (430)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHTT---SCCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTH-HHHTHH---H
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhc---cCCCEEEECCccHHHHHHHHHcCCCEEEEeccccccccc-cccccc---c
Confidence 233333333333333445556666655 789999999877789999999999999887544310000 000000 0
Q ss_pred ccCCCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHH------HhhhccccEEEEcChhhccHHHHhh
Q 012314 156 IIDSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERN------TRAMIAVNFHFCNSTYELESEAFTT 229 (466)
Q Consensus 156 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~vl~~s~~~le~~~~~~ 229 (466)
. .....+.+ ... .+ .....++..+. .+....++.+++++.+.++++...+
T Consensus 149 ------~------~~~~~~~~-----~~~--~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 204 (430)
T 2iyf_A 149 ------M------WREPRQTE-----RGR--AY-----YARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPHADRV 204 (430)
T ss_dssp ------H------HHHHHHSH-----HHH--HH-----HHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTTGGGS
T ss_pred ------h------hhhhccch-----HHH--HH-----HHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCCcccC
Confidence 0 00000000 000 00 00011111100 0011257889999999998764456
Q ss_pred cCC-cceeccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhC-CCCEEEEEcC
Q 012314 230 FPE-LLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELC-KRPFLWVVRP 307 (466)
Q Consensus 230 ~p~-v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~-~~~~i~~~~~ 307 (466)
.++ +++|||....... ..+|.+..+++++||+++||......+.+..++++++.. +.+++|.++.
T Consensus 205 ~~~~v~~vG~~~~~~~~-------------~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~~~~~~~G~ 271 (430)
T 2iyf_A 205 DEDVYTFVGACQGDRAE-------------EGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGWHLVLQIGR 271 (430)
T ss_dssp CTTTEEECCCCC------------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTTEEEEEECC-
T ss_pred CCccEEEeCCcCCCCCC-------------CCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCCeEEEEEeCC
Confidence 678 9999986543211 013554445578999999998744567888899999885 7788888875
Q ss_pred CCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCcccceeccCCchhhhhhhcCcceeecccccchhhhHHHHHHh
Q 012314 308 DITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDF 387 (466)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~ 387 (466)
+.. .+.+ +..++|+.+.+|+|+.++|.++++ ||+|||+||++||+++|+|+|++|...||..|+.++++
T Consensus 272 ~~~-------~~~l-~~~~~~v~~~~~~~~~~~l~~ad~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~- 340 (430)
T 2iyf_A 272 KVT-------PAEL-GELPDNVEVHDWVPQLAILRQADL--FVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADMLQG- 340 (430)
T ss_dssp --C-------GGGG-CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHH-
T ss_pred CCC-------hHHh-ccCCCCeEEEecCCHHHHhhccCE--EEECCCccHHHHHHHhCCCEEECCCccchHHHHHHHHH-
Confidence 411 1111 123578999999999999988777 99999999999999999999999999999999999999
Q ss_pred hhceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 012314 388 WKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALELKEKAMS 433 (466)
Q Consensus 388 ~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~~ 433 (466)
.|+|+.+.. +.++.++|.++|.++++|+++++++.++++++.+
T Consensus 341 ~g~g~~~~~---~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~ 383 (430)
T 2iyf_A 341 LGVARKLAT---EEATADLLRETALALVDDPEVARRLRRIQAEMAQ 383 (430)
T ss_dssp TTSEEECCC---C-CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred cCCEEEcCC---CCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHh
Confidence 599999974 6789999999999999999999999999998876
|
| >2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-40 Score=324.44 Aligned_cols=375 Identities=13% Similarity=0.124 Sum_probs=245.6
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCC--------
Q 012314 2 SRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWE-------- 73 (466)
Q Consensus 2 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 73 (466)
.++||+|++.++.||++|+++||++|+++||+|+|++++...+.+... +++++.++...+...
T Consensus 19 ~~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~~~---------G~~~~~i~~~~~~~~~~~~~~~~ 89 (441)
T 2yjn_A 19 SHMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITAA---------GLTAVPVGTDVDLVDFMTHAGHD 89 (441)
T ss_dssp CCCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHHTT---------TCCEEECSCCCCHHHHHHHTTHH
T ss_pred CccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHHHhC---------CCceeecCCccchHHHhhhhhcc
Confidence 468999999999999999999999999999999999998876666553 788988875431000
Q ss_pred --------C-----Cc--cHHHH---HHHHHHh----c-cH-HHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCC
Q 012314 74 --------D-----RN--DLGKL---IEKCLQV----M-PG-KLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNV 129 (466)
Q Consensus 74 --------~-----~~--~~~~~---~~~~~~~----~-~~-~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgi 129 (466)
. .. ....+ ...+... . .. .+.++++.+++ .+||+||+|.+..++..+|+.+||
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~pDlVv~d~~~~~~~~aA~~lgi 166 (441)
T 2yjn_A 90 IIDYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRK---WRPDLVIWEPLTFAAPIAAAVTGT 166 (441)
T ss_dssp HHHHHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHH---HCCSEEEECTTCTHHHHHHHHHTC
T ss_pred cccccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHh---cCCCEEEecCcchhHHHHHHHcCC
Confidence 0 00 11111 1112111 1 13 56667666665 789999999977899999999999
Q ss_pred ceEEeccchhHHHHHHhhcccccccCccCCCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHh-h-
Q 012314 130 RGAVFWPSSAASVALVFRIPKLIDDGIIDSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTR-A- 207 (466)
Q Consensus 130 P~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~- 207 (466)
|++.+...+.........+..... ..+.. . + .....+.+..+..+..- .
T Consensus 167 P~v~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~---~--------~-~~~~~~~l~~~~~~~g~~~~ 217 (441)
T 2yjn_A 167 PHARLLWGPDITTRARQNFLGLLP-----------------DQPEE---H--------R-EDPLAEWLTWTLEKYGGPAF 217 (441)
T ss_dssp CEEEECSSCCHHHHHHHHHHHHGG-----------------GSCTT---T--------C-CCHHHHHHHHHHHHTTCCCC
T ss_pred CEEEEecCCCcchhhhhhhhhhcc-----------------ccccc---c--------c-cchHHHHHHHHHHHcCCCCC
Confidence 999986554321111000000000 00000 0 0 00000111111111000 0
Q ss_pred ---hccccEEEEcChhhccHHHHhhc-CCcceeccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEecccccc-
Q 012314 208 ---MIAVNFHFCNSTYELESEAFTTF-PELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTIL- 282 (466)
Q Consensus 208 ---~~~~~~vl~~s~~~le~~~~~~~-p~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~- 282 (466)
...++.++..+.+.++++ ..++ ..+.++++ . .+.++.+|++..+++++|||++||....
T Consensus 218 ~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~---~------------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~ 281 (441)
T 2yjn_A 218 DEEVVVGQWTIDPAPAAIRLD-TGLKTVGMRYVDY---N------------GPSVVPEWLHDEPERRRVCLTLGISSREN 281 (441)
T ss_dssp CGGGTSCSSEEECSCGGGSCC-CCCCEEECCCCCC---C------------SSCCCCGGGSSCCSSCEEEEEC-------
T ss_pred CccccCCCeEEEecCccccCC-CCCCCCceeeeCC---C------------CCcccchHhhcCCCCCEEEEECCCCcccc
Confidence 112455677766666642 2221 11222211 1 1223457888666678999999998543
Q ss_pred --CHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCcccceeccCCchhhh
Q 012314 283 --DQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTME 360 (466)
Q Consensus 283 --~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~e 360 (466)
..+.+..+++++...+.+++|.+++. ..+.+. ..++|+++.+|+|+.++|..+++ ||||||+||++|
T Consensus 282 ~~~~~~~~~~~~al~~~~~~~v~~~g~~----~~~~l~-----~~~~~v~~~~~~~~~~ll~~ad~--~V~~~G~~t~~E 350 (441)
T 2yjn_A 282 SIGQVSIEELLGAVGDVDAEIIATFDAQ----QLEGVA-----NIPDNVRTVGFVPMHALLPTCAA--TVHHGGPGSWHT 350 (441)
T ss_dssp ---CCSTTTTHHHHHTSSSEEEECCCTT----TTSSCS-----SCCSSEEECCSCCHHHHGGGCSE--EEECCCHHHHHH
T ss_pred cChHHHHHHHHHHHHcCCCEEEEEECCc----chhhhc-----cCCCCEEEecCCCHHHHHhhCCE--EEECCCHHHHHH
Confidence 33567788899988899999988754 112221 13678999999999999955555 999999999999
Q ss_pred hhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCC
Q 012314 361 GVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALELKEKAMSSVREGGS 440 (466)
Q Consensus 361 al~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~~~~~~~g~ 440 (466)
|+++|||+|++|...||..||.++++ .|+|+.+.. +++++++|.++|.++|+|++++++++++++++++ ..
T Consensus 351 a~~~G~P~i~~p~~~dQ~~na~~l~~-~g~g~~~~~---~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~----~~- 421 (441)
T 2yjn_A 351 AAIHGVPQVILPDGWDTGVRAQRTQE-FGAGIALPV---PELTPDQLRESVKRVLDDPAHRAGAARMRDDMLA----EP- 421 (441)
T ss_dssp HHHTTCCEEECCCSHHHHHHHHHHHH-HTSEEECCT---TTCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHT----SC-
T ss_pred HHHhCCCEEEeCCcccHHHHHHHHHH-cCCEEEccc---ccCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHc----CC-
Confidence 99999999999999999999999999 599999974 6789999999999999999999999999999986 33
Q ss_pred cHHHHHHHHHHHH
Q 012314 441 SYKTFQNFLQWVK 453 (466)
Q Consensus 441 ~~~~~~~~v~~~~ 453 (466)
+.+.+.+.++.+.
T Consensus 422 ~~~~~~~~i~~~~ 434 (441)
T 2yjn_A 422 SPAEVVGICEELA 434 (441)
T ss_dssp CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH
Confidence 3444444444443
|
| >2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-39 Score=311.09 Aligned_cols=341 Identities=14% Similarity=0.126 Sum_probs=241.2
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCC------------CC
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGM------------EP 71 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~ 71 (466)
|||++++.++.||++|+++|+++|+++||+|++++++...+.+... +++++.++... +.
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~~~~ 71 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVTGV---------GLPAVATTDLPIRHFITTDREGRPE 71 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHT---------TCCEEESCSSCHHHHHHBCTTSCBC
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHHhC---------CCEEEEeCCcchHHHHhhhcccCcc
Confidence 5899999999999999999999999999999999998766655543 67888776432 00
Q ss_pred CCCCc-cHHHHH-HH-HHHhccHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEEeccchhHHHHHHhhc
Q 012314 72 WEDRN-DLGKLI-EK-CLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRI 148 (466)
Q Consensus 72 ~~~~~-~~~~~~-~~-~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~ 148 (466)
..... .....+ .. +.......++++.+.+++ .+||+||+|.+..++..+|+.+|||++.+...+..
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~-------- 140 (384)
T 2p6p_A 72 AIPSDPVAQARFTGRWFARMAASSLPRMLDFSRA---WRPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVD-------- 140 (384)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCC--------
T ss_pred ccCcchHHHHHHHHHHHHhhHHHHHHHHHHHHhc---cCCcEEEECcchhhHHHHHHhcCCCEEEeccCCcc--------
Confidence 00010 111111 21 212223344555555554 78999999987778899999999999987532110
Q ss_pred ccccccCccCCCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHH-HhhhccccEEEEcChhhccHHHH
Q 012314 149 PKLIDDGIIDSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERN-TRAMIAVNFHFCNSTYELESEAF 227 (466)
Q Consensus 149 p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~vl~~s~~~le~~~~ 227 (466)
. .+ +. ..+ .....++..+. ......++.+++++.+.++++ .
T Consensus 141 --------------~---------~~--------~~-~~~-----~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~-~ 182 (384)
T 2p6p_A 141 --------------A---------DG--------IH-PGA-----DAELRPELSELGLERLPAPDLFIDICPPSLRPA-N 182 (384)
T ss_dssp --------------C---------TT--------TH-HHH-----HHHTHHHHHHTTCSSCCCCSEEEECSCGGGSCT-T
T ss_pred --------------c---------ch--------hh-HHH-----HHHHHHHHHHcCCCCCCCCCeEEEECCHHHCCC-C
Confidence 0 00 00 000 00001111110 000112678999999998864 3
Q ss_pred hhc-CCcceeccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEecccccc-----CHHHHHHHHHHHHhCCCCE
Q 012314 228 TTF-PELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTIL-----DQVQFQELALGLELCKRPF 301 (466)
Q Consensus 228 ~~~-p~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~-----~~~~~~~~~~a~~~~~~~~ 301 (466)
++. +++.+++. . .+.++.+|++..+++++||+++||.... +.+.+..+++++.+.+.++
T Consensus 183 ~~~~~~~~~~~~---~------------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~~~~~ 247 (384)
T 2p6p_A 183 AAPARMMRHVAT---S------------RQCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDVEL 247 (384)
T ss_dssp SCCCEECCCCCC---C------------CCCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTTTCEE
T ss_pred CCCCCceEecCC---C------------CCCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcCCcEE
Confidence 332 23444421 1 0123457887655567999999998653 4577889999999889999
Q ss_pred EEEEcCCCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCcccceeccCCchhhhhhhcCcceeecccccchhhhH
Q 012314 302 LWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNE 381 (466)
Q Consensus 302 i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a 381 (466)
+|+.++. ..+.+. ..++|+.+ +|+|+.++|.++++ ||||||+||++||+++|+|+|++|...||..|+
T Consensus 248 ~~~~g~~--------~~~~l~-~~~~~v~~-~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~dq~~~a 315 (384)
T 2p6p_A 248 IVAAPDT--------VAEALR-AEVPQARV-GWTPLDVVAPTCDL--LVHHAGGVSTLTGLSAGVPQLLIPKGSVLEAPA 315 (384)
T ss_dssp EEECCHH--------HHHHHH-HHCTTSEE-ECCCHHHHGGGCSE--EEECSCTTHHHHHHHTTCCEEECCCSHHHHHHH
T ss_pred EEEeCCC--------CHHhhC-CCCCceEE-cCCCHHHHHhhCCE--EEeCCcHHHHHHHHHhCCCEEEccCcccchHHH
Confidence 9987632 112222 35789999 99999999966555 999999999999999999999999999999999
Q ss_pred HHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 012314 382 RYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALELKEKAMS 433 (466)
Q Consensus 382 ~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~~ 433 (466)
.++++ .|+|+.+.. +.++.++|.++|+++|+|++++++++++++++++
T Consensus 316 ~~~~~-~g~g~~~~~---~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~ 363 (384)
T 2p6p_A 316 RRVAD-YGAAIALLP---GEDSTEAIADSCQELQAKDTYARRAQDLSREISG 363 (384)
T ss_dssp HHHHH-HTSEEECCT---TCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHT
T ss_pred HHHHH-CCCeEecCc---CCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHh
Confidence 99999 599999974 6789999999999999999999999999999987
|
| >4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-37 Score=301.21 Aligned_cols=342 Identities=13% Similarity=0.120 Sum_probs=225.3
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCC---------C
Q 012314 2 SRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEP---------W 72 (466)
Q Consensus 2 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~ 72 (466)
.+|||+|++.++.||++|++.|+++|+++||+|++++++...+.+... ++.+..++..... .
T Consensus 14 ~~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~---------G~~~~~~~~~~~~~~~~~~~~~~ 84 (398)
T 4fzr_A 14 SHMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTGA---------GLPFAPTCPSLDMPEVLSWDREG 84 (398)
T ss_dssp -CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHHT---------TCCEEEEESSCCHHHHHSBCTTS
T ss_pred CceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHhC---------CCeeEecCCccchHhhhhhhccC
Confidence 368999999999999999999999999999999999998777777665 5777666521100 0
Q ss_pred ---CCCcc----HHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEEeccchhHHHHHH
Q 012314 73 ---EDRND----LGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALV 145 (466)
Q Consensus 73 ---~~~~~----~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~ 145 (466)
..... .......+.......++++.+.+++ .+||+||+|...+++..+|+.+|||++.+...........
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~~~~~~ 161 (398)
T 4fzr_A 85 NRTTMPREEKPLLEHIGRGYGRLVLRMRDEALALAER---WKPDLVLTETYSLTGPLVAATLGIPWIEQSIRLASPELIK 161 (398)
T ss_dssp CBCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCHHHH
T ss_pred cccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh---CCCCEEEECccccHHHHHHHhhCCCEEEeccCCCCchhhh
Confidence 00001 1112222222223344455555554 7899999998777899999999999998764322100000
Q ss_pred hhcccccccCccCCCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhh-----hccccEEEEcChh
Q 012314 146 FRIPKLIDDGIIDSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRA-----MIAVNFHFCNSTY 220 (466)
Q Consensus 146 ~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~vl~~s~~ 220 (466)
......+...... ....+..+....+
T Consensus 162 -------------------------------------------------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 192 (398)
T 4fzr_A 162 -------------------------------------------------SAGVGELAPELAELGLTDFPDPLLSIDVCPP 192 (398)
T ss_dssp -------------------------------------------------HHHHHHTHHHHHTTTCSSCCCCSEEEECSCG
T ss_pred -------------------------------------------------HHHHHHHHHHHHHcCCCCCCCCCeEEEeCCh
Confidence 0001111111111 1234566777777
Q ss_pred hccHHHHhhcCCcceeccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEecccccc--------CHHHHHHHHH
Q 012314 221 ELESEAFTTFPELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTIL--------DQVQFQELAL 292 (466)
Q Consensus 221 ~le~~~~~~~p~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~--------~~~~~~~~~~ 292 (466)
.++.+.......+.++++.. ....+..|+...+++++||+++||.... ..+.+..+++
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~ 258 (398)
T 4fzr_A 193 SMEAQPKPGTTKMRYVPYNG--------------RNDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQ 258 (398)
T ss_dssp GGC----CCCEECCCCCCCC--------------SSCCCCHHHHSCCSSCEEECC----------------CCSHHHHHH
T ss_pred hhCCCCCCCCCCeeeeCCCC--------------CCCCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHH
Confidence 66644111111122222110 1123346777656678999999998432 3456888999
Q ss_pred HHHhCCCCEEEEEcCCCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCcccceeccCCchhhhhhhcCcceeecc
Q 012314 293 GLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWP 372 (466)
Q Consensus 293 a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P 372 (466)
++.+.+.+++|+.++.. .+.+. ..++|+++.+|+|+.++|.++++ ||||||.||++||+++|+|+|++|
T Consensus 259 al~~~~~~~v~~~~~~~--------~~~l~-~~~~~v~~~~~~~~~~ll~~ad~--~v~~gG~~t~~Ea~~~G~P~v~~p 327 (398)
T 4fzr_A 259 ELPKLGFEVVVAVSDKL--------AQTLQ-PLPEGVLAAGQFPLSAIMPACDV--VVHHGGHGTTLTCLSEGVPQVSVP 327 (398)
T ss_dssp HGGGGTCEEEECCCC-----------------CCTTEEEESCCCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCEEECC
T ss_pred HHHhCCCEEEEEeCCcc--------hhhhc-cCCCcEEEeCcCCHHHHHhhCCE--EEecCCHHHHHHHHHhCCCEEecC
Confidence 99888999998887541 11111 34789999999999999988666 999999999999999999999999
Q ss_pred cccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 012314 373 YFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALELKEKAMS 433 (466)
Q Consensus 373 ~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~~ 433 (466)
...||..|+.++++ .|+|+.+.. +.++++.|.++|.++|+|+++|+++++.++++.+
T Consensus 328 ~~~~q~~~a~~~~~-~g~g~~~~~---~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~~~~~ 384 (398)
T 4fzr_A 328 VIAEVWDSARLLHA-AGAGVEVPW---EQAGVESVLAACARIRDDSSYVGNARRLAAEMAT 384 (398)
T ss_dssp CSGGGHHHHHHHHH-TTSEEECC----------CHHHHHHHHHHCTHHHHHHHHHHHHHTT
T ss_pred CchhHHHHHHHHHH-cCCEEecCc---ccCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHc
Confidence 99999999999999 599999975 6789999999999999999999999999999876
|
| >3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-37 Score=297.71 Aligned_cols=336 Identities=15% Similarity=0.209 Sum_probs=230.4
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCC------------
Q 012314 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGME------------ 70 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 70 (466)
+|||+|++.++.||++|+++|+++|.++||+|+++++ ...+.+... ++.+..++....
T Consensus 20 ~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~~~---------G~~~~~~~~~~~~~~~~~~~~~~~ 89 (398)
T 3oti_A 20 HMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAAAA---------GLEVVDVAPDYSAVKVFEQVAKDN 89 (398)
T ss_dssp CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHHTT---------TCEEEESSTTCCHHHHHHHHHHHC
T ss_pred cCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHHhC---------CCeeEecCCccCHHHHhhhcccCC
Confidence 4799999999999999999999999999999999999 776666554 788888874311
Q ss_pred ----------CCCCCccHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEEeccchhH
Q 012314 71 ----------PWEDRNDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAA 140 (466)
Q Consensus 71 ----------~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~~~~~~ 140 (466)
...........+..........+.+++++ ++||+||+|...+++..+|+.+|||++.+......
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------~~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~~~~ 163 (398)
T 3oti_A 90 PRFAETVATRPAIDLEEWGVQIAAVNRPLVDGTMALVDD------YRPDLVVYEQGATVGLLAADRAGVPAVQRNQSAWR 163 (398)
T ss_dssp HHHHHTGGGSCCCSGGGGHHHHHHHHGGGHHHHHHHHHH------HCCSEEEEETTCHHHHHHHHHHTCCEEEECCTTCC
T ss_pred ccccccccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHH------cCCCEEEECchhhHHHHHHHHcCCCEEEEeccCCC
Confidence 11111222222222322333344444444 78999999988888999999999999986532210
Q ss_pred HHHHHhhcccccccCccCCCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChh
Q 012314 141 SVALVFRIPKLIDDGIIDSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTY 220 (466)
Q Consensus 141 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~ 220 (466)
. . ... ... .........+..-.....+.++....+
T Consensus 164 ~---------------------~------------------~~~-~~~-----~~~l~~~~~~~~~~~~~~~~~~~~~~~ 198 (398)
T 3oti_A 164 T---------------------R------------------GMH-RSI-----ASFLTDLMDKHQVSLPEPVATIESFPP 198 (398)
T ss_dssp C---------------------T------------------THH-HHH-----HTTCHHHHHHTTCCCCCCSEEECSSCG
T ss_pred c---------------------c------------------chh-hHH-----HHHHHHHHHHcCCCCCCCCeEEEeCCH
Confidence 0 0 000 000 000011111100001233556655555
Q ss_pred hccHHHHhhcCCcceeccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEecccccc--CHHHHHHHHHHHHhCC
Q 012314 221 ELESEAFTTFPELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTIL--DQVQFQELALGLELCK 298 (466)
Q Consensus 221 ~le~~~~~~~p~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~--~~~~~~~~~~a~~~~~ 298 (466)
.+..+.......+.++ |. .....+..|+...+++++||+++||.... ..+.+..+++++++.+
T Consensus 199 ~~~~~~~~~~~~~~~~-~~--------------~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~ 263 (398)
T 3oti_A 199 SLLLEAEPEGWFMRWV-PY--------------GGGAVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGEVD 263 (398)
T ss_dssp GGGTTSCCCSBCCCCC-CC--------------CCCEECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHHTSS
T ss_pred HHCCCCCCCCCCcccc-CC--------------CCCcCCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHHcCC
Confidence 5553210000111121 10 01122335666556678999999998432 5677889999999889
Q ss_pred CCEEEEEcCCCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCcccceeccCCchhhhhhhcCcceeecccccchh
Q 012314 299 RPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQF 378 (466)
Q Consensus 299 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~ 378 (466)
.+++|+.++.. .+.+. ..++|+++.+|+|+.++|.++++ ||||||.||++||+++|+|+|++|...||.
T Consensus 264 ~~~v~~~g~~~--------~~~l~-~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Eal~~G~P~v~~p~~~dq~ 332 (398)
T 3oti_A 264 ADFVLALGDLD--------ISPLG-TLPRNVRAVGWTPLHTLLRTCTA--VVHHGGGGTVMTAIDAGIPQLLAPDPRDQF 332 (398)
T ss_dssp SEEEEECTTSC--------CGGGC-SCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCCTTCCS
T ss_pred CEEEEEECCcC--------hhhhc-cCCCcEEEEccCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEcCCCchhH
Confidence 99999987651 11111 23678999999999999977666 999999999999999999999999999999
Q ss_pred hhH--HHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 012314 379 LNE--RYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALELKEKAMS 433 (466)
Q Consensus 379 ~~a--~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~~ 433 (466)
.|+ .++++ .|+|+.++. ...+++.|. ++|+|+++|++++++++++.+
T Consensus 333 ~~a~~~~~~~-~g~g~~~~~---~~~~~~~l~----~ll~~~~~~~~~~~~~~~~~~ 381 (398)
T 3oti_A 333 QHTAREAVSR-RGIGLVSTS---DKVDADLLR----RLIGDESLRTAAREVREEMVA 381 (398)
T ss_dssp SCTTHHHHHH-HTSEEECCG---GGCCHHHHH----HHHHCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHH-CCCEEeeCC---CCCCHHHHH----HHHcCHHHHHHHHHHHHHHHh
Confidence 999 99999 599999975 567888777 889999999999999999986
|
| >3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-35 Score=288.26 Aligned_cols=342 Identities=14% Similarity=0.160 Sum_probs=231.6
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEec-CCCCCCC---------
Q 012314 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSI-PDGMEPW--------- 72 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--------- 72 (466)
+|||+|++.++.||++|++.|+++|+++||+|++++++...+.+... ++.++.+ +......
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~~~ 71 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAHGA---------GLTTAGIRGNDRTGDTGGTTQLRF 71 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHHHHB---------TCEEEEC--------------CCS
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHHHhC---------CCceeeecCCccchhhhhhhcccc
Confidence 47999999999999999999999999999999999987766666554 6777776 3211100
Q ss_pred -CC---CccHHHHHHHHHHhccHH-------HHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEEeccchhHH
Q 012314 73 -ED---RNDLGKLIEKCLQVMPGK-------LEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAAS 141 (466)
Q Consensus 73 -~~---~~~~~~~~~~~~~~~~~~-------~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~ 141 (466)
.. ..........+....... ++++.+.+++ .+||+||+|...+++..+|+.+|||++.+.......
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~~~ 148 (391)
T 3tsa_A 72 PNPAFGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEA---WRPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVDPT 148 (391)
T ss_dssp CCGGGGCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HCCSEEEEETTCHHHHHHHHHTTCCEEEECCSCCCT
T ss_pred cccccccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHh---cCCCEEEeCcchhHHHHHHHHhCCCEEEEecCCccc
Confidence 00 000011112221111122 4455555554 789999999877788899999999999875322110
Q ss_pred HHHHhhcccccccCccCCCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhh-----ccccEEEE
Q 012314 142 VALVFRIPKLIDDGIIDSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAM-----IAVNFHFC 216 (466)
Q Consensus 142 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~vl~ 216 (466)
. .........++....... ...+.++.
T Consensus 149 ------------------------------------------~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (391)
T 3tsa_A 149 ------------------------------------------A------GPFSDRAHELLDPVCRHHGLTGLPTPELILD 180 (391)
T ss_dssp ------------------------------------------T------THHHHHHHHHHHHHHHHTTSSSSCCCSEEEE
T ss_pred ------------------------------------------c------ccccchHHHHHHHHHHHcCCCCCCCCceEEE
Confidence 0 000011112222211111 23367777
Q ss_pred cChhhccHHHHhhcCCcceeccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccc--cC-HHHHHHHHHH
Q 012314 217 NSTYELESEAFTTFPELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTI--LD-QVQFQELALG 293 (466)
Q Consensus 217 ~s~~~le~~~~~~~p~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~--~~-~~~~~~~~~a 293 (466)
...++++.........+.++ |.. ....+..|+...+++++||+++||... .. .+.+..++++
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~-p~~--------------~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~ 245 (391)
T 3tsa_A 181 PCPPSLQASDAPQGAPVQYV-PYN--------------GSGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA 245 (391)
T ss_dssp CSCGGGSCTTSCCCEECCCC-CCC--------------CCEECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH
T ss_pred ecChhhcCCCCCccCCeeee-cCC--------------CCcCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh
Confidence 77777664311111122333 111 111233677665667899999999732 23 6778888888
Q ss_pred HHhC-CCCEEEEEcCCCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCcccceeccCCchhhhhhhcCcceeecc
Q 012314 294 LELC-KRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWP 372 (466)
Q Consensus 294 ~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P 372 (466)
++. +.+++|..++. ..+.+. ..++|+++.+|+|+.++|.++++ ||||||.||++||+++|+|+|++|
T Consensus 246 -~~~p~~~~v~~~~~~----~~~~l~-----~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p 313 (391)
T 3tsa_A 246 -TELPGVEAVIAVPPE----HRALLT-----DLPDNARIAESVPLNLFLRTCEL--VICAGGSGTAFTATRLGIPQLVLP 313 (391)
T ss_dssp -HTSTTEEEEEECCGG----GGGGCT-----TCCTTEEECCSCCGGGTGGGCSE--EEECCCHHHHHHHHHTTCCEEECC
T ss_pred -ccCCCeEEEEEECCc----chhhcc-----cCCCCEEEeccCCHHHHHhhCCE--EEeCCCHHHHHHHHHhCCCEEecC
Confidence 877 77888887654 111111 23678999999999999955555 999999999999999999999999
Q ss_pred cccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 012314 373 YFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALELKEKAMS 433 (466)
Q Consensus 373 ~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~~ 433 (466)
...||..|+.++++ .|+|..+.++ .+..+++.|.++|.++|+|++++++++++++.+.+
T Consensus 314 ~~~~q~~~a~~~~~-~g~g~~~~~~-~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~~~~~ 372 (391)
T 3tsa_A 314 QYFDQFDYARNLAA-AGAGICLPDE-QAQSDHEQFTDSIATVLGDTGFAAAAIKLSDEITA 372 (391)
T ss_dssp CSTTHHHHHHHHHH-TTSEEECCSH-HHHTCHHHHHHHHHHHHTCTHHHHHHHHHHHHHHT
T ss_pred CcccHHHHHHHHHH-cCCEEecCcc-cccCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHc
Confidence 99999999999999 5999999510 03478999999999999999999999999999876
|
| >3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-32 Score=270.12 Aligned_cols=344 Identities=17% Similarity=0.172 Sum_probs=237.1
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCC--------------
Q 012314 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDG-------------- 68 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 68 (466)
+|||+|++.++.||++|+++|+++|+++||+|++++++...+.+... ++++..++..
T Consensus 20 ~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~~~ 90 (412)
T 3otg_A 20 HMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLRKL---------GFEPVATGMPVFDGFLAALRIRFD 90 (412)
T ss_dssp SCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHT---------TCEEEECCCCHHHHHHHHHHHHHS
T ss_pred eeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHHHhc---------CCceeecCcccccchhhhhhhhhc
Confidence 58999999999999999999999999999999999998765555543 7888887741
Q ss_pred ---CCCCCCCccHHHHHHHHHHh-ccHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEEeccchhHHHHH
Q 012314 69 ---MEPWEDRNDLGKLIEKCLQV-MPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVAL 144 (466)
Q Consensus 69 ---~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~ 144 (466)
.+..............+... ....+.++.+.+++ .+||+||+|....++..+|+.+|||+|.+.......
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~~~~--- 164 (412)
T 3otg_A 91 TDSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIER---LRPDLVVQEISNYGAGLAALKAGIPTICHGVGRDTP--- 164 (412)
T ss_dssp CSCCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHH---HCCSEEEEETTCHHHHHHHHHHTCCEEEECCSCCCC---
T ss_pred ccCCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHh---cCCCEEEECchhhHHHHHHHHcCCCEEEecccccCc---
Confidence 00000000000111121111 11223334444443 789999999877788899999999999865332110
Q ss_pred HhhcccccccCccCCCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhh----------hccccEE
Q 012314 145 VFRIPKLIDDGIIDSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRA----------MIAVNFH 214 (466)
Q Consensus 145 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~v 214 (466)
..........+.+.... ...++.+
T Consensus 165 ----------------------------------------------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~d~~ 198 (412)
T 3otg_A 165 ----------------------------------------------DDLTRSIEEEVRGLAQRLGLDLPPGRIDGFGNPF 198 (412)
T ss_dssp ----------------------------------------------SHHHHHHHHHHHHHHHHTTCCCCSSCCGGGGCCE
T ss_pred ----------------------------------------------hhhhHHHHHHHHHHHHHcCCCCCcccccCCCCeE
Confidence 00000111111111111 1356778
Q ss_pred EEcChhhccHHHHhhcCCcceeccccCCCCCCCCCCCcccCCccchhh-hccCCCCeEEEEEeccccccCHHHHHHHHHH
Q 012314 215 FCNSTYELESEAFTTFPELLPIGPLLASNRLGNTAGYFWCEDSNCLKW-LDQQQPSSVVYVSFGSFTILDQVQFQELALG 293 (466)
Q Consensus 215 l~~s~~~le~~~~~~~p~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a 293 (466)
+..+.+.++.....+..... |+..... .....+..| ....+++++||+++|+......+.+..++++
T Consensus 199 i~~~~~~~~~~~~~~~~~~~---~~~~~~~---------~~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~ 266 (412)
T 3otg_A 199 IDIFPPSLQEPEFRARPRRH---ELRPVPF---------AEQGDLPAWLSSRDTARPLVYLTLGTSSGGTVEVLRAAIDG 266 (412)
T ss_dssp EECSCGGGSCHHHHTCTTEE---ECCCCCC---------CCCCCCCGGGGGSCTTSCEEEEECTTTTCSCHHHHHHHHHH
T ss_pred EeeCCHHhcCCcccCCCCcc---eeeccCC---------CCCCCCCCccccccCCCCEEEEEcCCCCcCcHHHHHHHHHH
Confidence 88887777755322222111 1111111 011123355 2323456799999999865567788999999
Q ss_pred HHhCCCCEEEEEcCCCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCcccceeccCCchhhhhhhcCcceeeccc
Q 012314 294 LELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPY 373 (466)
Q Consensus 294 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~ 373 (466)
+.+.+.+++|+.++... .+.+. ..++|+.+.+|+|+.++|.++++ ||+|||+||++||+++|+|+|++|.
T Consensus 267 l~~~~~~~~~~~g~~~~---~~~l~-----~~~~~v~~~~~~~~~~~l~~ad~--~v~~~g~~t~~Ea~a~G~P~v~~p~ 336 (412)
T 3otg_A 267 LAGLDADVLVASGPSLD---VSGLG-----EVPANVRLESWVPQAALLPHVDL--VVHHGGSGTTLGALGAGVPQLSFPW 336 (412)
T ss_dssp HHTSSSEEEEECCSSCC---CTTCC-----CCCTTEEEESCCCHHHHGGGCSE--EEESCCHHHHHHHHHHTCCEEECCC
T ss_pred HHcCCCEEEEEECCCCC---hhhhc-----cCCCcEEEeCCCCHHHHHhcCcE--EEECCchHHHHHHHHhCCCEEecCC
Confidence 99889999998876521 11111 13678889999999999988776 9999999999999999999999999
Q ss_pred ccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 012314 374 FGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALELKEKAMS 433 (466)
Q Consensus 374 ~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~~ 433 (466)
..||..|+.++++ .|+|..+.+ +.+++++|.++|.++|+|+++++++.+.++++.+
T Consensus 337 ~~~q~~~~~~v~~-~g~g~~~~~---~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~~~~~ 392 (412)
T 3otg_A 337 AGDSFANAQAVAQ-AGAGDHLLP---DNISPDSVSGAAKRLLAEESYRAGARAVAAEIAA 392 (412)
T ss_dssp STTHHHHHHHHHH-HTSEEECCG---GGCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHH-cCCEEecCc---ccCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHhc
Confidence 9999999999999 599999975 6789999999999999999999999999999876
|
| >3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.97 E-value=9.6e-29 Score=236.79 Aligned_cols=320 Identities=14% Similarity=0.090 Sum_probs=194.0
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcch-HHHHHhhhcCCCCCCCeEEEecCC-CCCCCCCCccH
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNH-KRVVESLQGKNYLGEQIHLVSIPD-GMEPWEDRNDL 78 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 78 (466)
|++ ||+|.+.++.||++|+++||++|.++||+|+|+++.... ..+... .++.++.++. +++.......+
T Consensus 1 M~~-~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~--------~g~~~~~i~~~~~~~~~~~~~~ 71 (365)
T 3s2u_A 1 MKG-NVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPK--------AGLPLHLIQVSGLRGKGLKSLV 71 (365)
T ss_dssp --C-EEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGG--------GTCCEEECC-------------
T ss_pred CCC-cEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhh--------cCCcEEEEECCCcCCCCHHHHH
Confidence 665 688888777799999999999999999999999986543 222222 3688888763 22221111111
Q ss_pred HHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCch--hHHHHHHHcCCceEEeccchhHHHHHHhhcccccccCc
Q 012314 79 GKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIG--WSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGI 156 (466)
Q Consensus 79 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~ 156 (466)
...+..+ .. ......++++ .+||+||.+..+. .+..+|+.+|||+++.-..
T Consensus 72 ~~~~~~~-~~-~~~~~~~l~~------~~PDvVi~~g~~~s~p~~laA~~~~iP~vihe~n------------------- 124 (365)
T 3s2u_A 72 KAPLELL-KS-LFQALRVIRQ------LRPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQN------------------- 124 (365)
T ss_dssp -CHHHHH-HH-HHHHHHHHHH------HCCSEEEECSSSTHHHHHHHHHHTTCCEEEEECS-------------------
T ss_pred HHHHHHH-HH-HHHHHHHHHh------cCCCEEEEcCCcchHHHHHHHHHcCCCEEEEecc-------------------
Confidence 1111111 11 1123445555 7899999996544 4567899999999863100
Q ss_pred cCCCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHHHhhcCCccee
Q 012314 157 IDSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTFPELLPI 236 (466)
Q Consensus 157 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~~~~~p~v~~V 236 (466)
.+|++. .+++ ...++.++......+ +...+..++
T Consensus 125 --------------~~~G~~---------------------nr~l------~~~a~~v~~~~~~~~-----~~~~k~~~~ 158 (365)
T 3s2u_A 125 --------------AVAGTA---------------------NRSL------APIARRVCEAFPDTF-----PASDKRLTT 158 (365)
T ss_dssp --------------SSCCHH---------------------HHHH------GGGCSEEEESSTTSS-----CC---CEEC
T ss_pred --------------hhhhhH---------------------HHhh------ccccceeeecccccc-----cCcCcEEEE
Confidence 001100 0010 022344443332221 123456677
Q ss_pred ccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhCC----CCEEEEEcCCCCCC
Q 012314 237 GPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCK----RPFLWVVRPDITTD 312 (466)
Q Consensus 237 Gpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~----~~~i~~~~~~~~~~ 312 (466)
|.....+... .. . ......++++.|++..||.+.. ...+.+.+++..+. ..++|.++..
T Consensus 159 g~pvr~~~~~-------~~--~--~~~~~~~~~~~ilv~gGs~g~~--~~~~~~~~al~~l~~~~~~~vi~~~G~~---- 221 (365)
T 3s2u_A 159 GNPVRGELFL-------DA--H--ARAPLTGRRVNLLVLGGSLGAE--PLNKLLPEALAQVPLEIRPAIRHQAGRQ---- 221 (365)
T ss_dssp CCCCCGGGCC-------CT--T--SSCCCTTSCCEEEECCTTTTCS--HHHHHHHHHHHTSCTTTCCEEEEECCTT----
T ss_pred CCCCchhhcc-------ch--h--hhcccCCCCcEEEEECCcCCcc--ccchhhHHHHHhcccccceEEEEecCcc----
Confidence 7544433211 00 0 1111223456899988887532 23344556665443 4466666544
Q ss_pred CCCCCchhHHHHhcCCceeecccchh-hhhcCCCcccceeccCCchhhhhhhcCcceeecccc----cchhhhHHHHHHh
Q 012314 313 ANDRYPEGFQERVAARGQMISWAPQL-RVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYF----GDQFLNERYICDF 387 (466)
Q Consensus 313 ~~~~~~~~~~~~~~~n~~~~~~~p~~-~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~----~DQ~~~a~rv~~~ 387 (466)
..+...+ ..+..+.++.+.+|+++. ++|..+++ +|||+|.+|++|++++|+|+|.+|.. .+|..||+.+++
T Consensus 222 ~~~~~~~-~~~~~~~~~~v~~f~~dm~~~l~~aDl--vI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~- 297 (365)
T 3s2u_A 222 HAEITAE-RYRTVAVEADVAPFISDMAAAYAWADL--VICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVR- 297 (365)
T ss_dssp THHHHHH-HHHHTTCCCEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHT-
T ss_pred ccccccc-eecccccccccccchhhhhhhhccceE--EEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHH-
Confidence 1111111 122345788899999986 59977777 99999999999999999999999974 589999999999
Q ss_pred hhceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHH
Q 012314 388 WKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALE 426 (466)
Q Consensus 388 ~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~ 426 (466)
.|+|..+.. +.++++.|.++|.++++|++.++++.+
T Consensus 298 ~G~a~~l~~---~~~~~~~L~~~i~~ll~d~~~~~~m~~ 333 (365)
T 3s2u_A 298 SGAGRLLPQ---KSTGAAELAAQLSEVLMHPETLRSMAD 333 (365)
T ss_dssp TTSEEECCT---TTCCHHHHHHHHHHHHHCTHHHHHHHH
T ss_pred CCCEEEeec---CCCCHHHHHHHHHHHHCCHHHHHHHHH
Confidence 599999974 788999999999999999876664433
|
| >2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=8.5e-28 Score=204.87 Aligned_cols=164 Identities=21% Similarity=0.386 Sum_probs=140.4
Q ss_pred cCCccchhhhccCCCCeEEEEEecccc-ccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchhHHHHhcCCceee
Q 012314 254 CEDSNCLKWLDQQQPSSVVYVSFGSFT-ILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMI 332 (466)
Q Consensus 254 ~~~~~l~~~~~~~~~~~~v~vs~Gs~~-~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~ 332 (466)
+.+.++.+|++..+++++||+++||.. ..+.+.+..+++++.+.+.+++|++++.. .+ ..++|+++.
T Consensus 6 ~l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~--------~~----~~~~~v~~~ 73 (170)
T 2o6l_A 6 PLPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNK--------PD----TLGLNTRLY 73 (170)
T ss_dssp CCCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSC--------CT----TCCTTEEEE
T ss_pred CCCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcC--------cc----cCCCcEEEe
Confidence 567789999987766789999999984 45678889999999988999999987541 11 135788899
Q ss_pred cccchhhhhcCCCcccceeccCCchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHH
Q 012314 333 SWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVD 412 (466)
Q Consensus 333 ~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~ 412 (466)
+|+|+.++|.|+.+++||||||+||++||+++|+|+|++|...||..||.++++ .|+|+.+.. +.++.++|.++|.
T Consensus 74 ~~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~-~g~g~~~~~---~~~~~~~l~~~i~ 149 (170)
T 2o6l_A 74 KWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKA-RGAAVRVDF---NTMSSTDLLNALK 149 (170)
T ss_dssp SSCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHT-TTSEEECCT---TTCCHHHHHHHHH
T ss_pred cCCCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHH-cCCeEEecc---ccCCHHHHHHHHH
Confidence 999999999888888899999999999999999999999999999999999999 599999974 6789999999999
Q ss_pred HHhcCHHHHHHHHHHHHHHHH
Q 012314 413 QVLGNQDFKARALELKEKAMS 433 (466)
Q Consensus 413 ~ll~~~~~r~~a~~~~~~~~~ 433 (466)
++++|++||++++++++.+++
T Consensus 150 ~ll~~~~~~~~a~~~~~~~~~ 170 (170)
T 2o6l_A 150 RVINDPSYKENVMKLSRIQHD 170 (170)
T ss_dssp HHHHCHHHHHHHHHHC-----
T ss_pred HHHcCHHHHHHHHHHHHHhhC
Confidence 999999999999999998864
|
| >1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=2.3e-21 Score=186.11 Aligned_cols=343 Identities=14% Similarity=0.118 Sum_probs=206.3
Q ss_pred CCC--CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchH--HHHHhhhcCCCCCCCeEEEecCCC-CCCCCCC
Q 012314 1 MSR--PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHK--RVVESLQGKNYLGEQIHLVSIPDG-MEPWEDR 75 (466)
Q Consensus 1 m~~--~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 75 (466)
|++ +||++++.+..||..++..|+++|.++||+|++++...... .+.. .+++++.++.. +...
T Consensus 2 M~~m~mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~---------~g~~~~~~~~~~~~~~--- 69 (364)
T 1f0k_A 2 MSGQGKRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPK---------HGIEIDFIRISGLRGK--- 69 (364)
T ss_dssp -----CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGG---------GTCEEEECCCCCCTTC---
T ss_pred CCCCCcEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhccc---------cCCceEEecCCccCcC---
Confidence 566 79999997777999999999999999999999999865322 1221 26777766532 1111
Q ss_pred ccHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCc--hhHHHHHHHcCCceEEeccchhHHHHHHhhcccccc
Q 012314 76 NDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNI--GWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLID 153 (466)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~--~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~ 153 (466)
.....+..... ....+..+.+.+++ .+||+|+++... ..+..+++.+|+|++.......
T Consensus 70 -~~~~~~~~~~~-~~~~~~~l~~~l~~---~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~~-------------- 130 (364)
T 1f0k_A 70 -GIKALIAAPLR-IFNAWRQARAIMKA---YKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNGI-------------- 130 (364)
T ss_dssp -CHHHHHTCHHH-HHHHHHHHHHHHHH---HCCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSSS--------------
T ss_pred -ccHHHHHHHHH-HHHHHHHHHHHHHh---cCCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCCC--------------
Confidence 11111110000 01122333333333 689999998643 2466778889999986431100
Q ss_pred cCccCCCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHHHhhcCCc
Q 012314 154 DGIIDSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTFPEL 233 (466)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~~~~~p~v 233 (466)
++ ...++ ....++.+++.+... ++++
T Consensus 131 -------------------~~---------------------~~~~~------~~~~~d~v~~~~~~~--------~~~~ 156 (364)
T 1f0k_A 131 -------------------AG---------------------LTNKW------LAKIATKVMQAFPGA--------FPNA 156 (364)
T ss_dssp -------------------CC---------------------HHHHH------HTTTCSEEEESSTTS--------SSSC
T ss_pred -------------------Cc---------------------HHHHH------HHHhCCEEEecChhh--------cCCc
Confidence 00 00011 113456666655332 2355
Q ss_pred ceeccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhC--CCCEEEEEcCCCCC
Q 012314 234 LPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELC--KRPFLWVVRPDITT 311 (466)
Q Consensus 234 ~~VGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~--~~~~i~~~~~~~~~ 311 (466)
..||.-....... .+ .....+...+++++|++..|+.. +......+++++..+ +.+++++++..
T Consensus 157 ~~i~n~v~~~~~~--------~~-~~~~~~~~~~~~~~il~~~g~~~--~~k~~~~li~a~~~l~~~~~~l~i~G~~--- 222 (364)
T 1f0k_A 157 EVVGNPVRTDVLA--------LP-LPQQRLAGREGPVRVLVVGGSQG--ARILNQTMPQVAAKLGDSVTIWHQSGKG--- 222 (364)
T ss_dssp EECCCCCCHHHHT--------SC-CHHHHHTTCCSSEEEEEECTTTC--CHHHHHHHHHHHHHHGGGEEEEEECCTT---
T ss_pred eEeCCccchhhcc--------cc-hhhhhcccCCCCcEEEEEcCchH--hHHHHHHHHHHHHHhcCCcEEEEEcCCc---
Confidence 5665322211100 00 01112222234557777777753 344455566666544 45556666655
Q ss_pred CCCCCCchhHHH---Hhc-CCceeecccch-hhhhcCCCcccceeccCCchhhhhhhcCcceeecccc---cchhhhHHH
Q 012314 312 DANDRYPEGFQE---RVA-ARGQMISWAPQ-LRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYF---GDQFLNERY 383 (466)
Q Consensus 312 ~~~~~~~~~~~~---~~~-~n~~~~~~~p~-~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~---~DQ~~~a~r 383 (466)
. .+.+.+ +.. +|+.+.+|+++ ..++..+++ +|+++|.+++.||+++|+|+|+.|.. .||..|+..
T Consensus 223 ---~--~~~l~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~--~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~ 295 (364)
T 1f0k_A 223 ---S--QQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADV--VVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALP 295 (364)
T ss_dssp ---C--HHHHHHHHHHTTCTTSEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHH
T ss_pred ---h--HHHHHHHHhhcCCCceEEecchhhHHHHHHhCCE--EEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHHHH
Confidence 1 133332 222 58889999954 579977777 99999988999999999999999987 799999999
Q ss_pred HHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhcccC
Q 012314 384 ICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVKTNALAH 459 (466)
Q Consensus 384 v~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~~~~~ 459 (466)
+.+ .|.|..+++ ++++.++|+++|.++ |++.++++.+-+++.. +..+..+.++++.+.+.+....|
T Consensus 296 ~~~-~g~g~~~~~---~d~~~~~la~~i~~l--~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~y~~~~~~~ 361 (364)
T 1f0k_A 296 LEK-AGAAKIIEQ---PQLSVDAVANTLAGW--SRETLLTMAERARAAS----IPDATERVANEVSRVARALEHHH 361 (364)
T ss_dssp HHH-TTSEEECCG---GGCCHHHHHHHHHTC--CHHHHHHHHHHHHHTC----CTTHHHHHHHHHHHHHTTC----
T ss_pred HHh-CCcEEEecc---ccCCHHHHHHHHHhc--CHHHHHHHHHHHHHhh----ccCHHHHHHHHHHHHHHHHHhhc
Confidence 998 499999874 556799999999998 8887776655444332 23444555555555555544433
|
| >3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=1.5e-16 Score=144.57 Aligned_cols=116 Identities=9% Similarity=0.065 Sum_probs=89.3
Q ss_pred CCeEEEEEeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchhHHHHh--cCCceeecccchh-hhhcCC
Q 012314 268 PSSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERV--AARGQMISWAPQL-RVLNHP 344 (466)
Q Consensus 268 ~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~--~~n~~~~~~~p~~-~ll~~~ 344 (466)
+.+.|+|++|... .......+++++.... ++.++.+.. ....+.+.+.. .+|+.+..|++++ +++..+
T Consensus 156 ~~~~ILv~~GG~d--~~~l~~~vl~~L~~~~-~i~vv~G~~------~~~~~~l~~~~~~~~~v~v~~~~~~m~~~m~~a 226 (282)
T 3hbm_A 156 KKYDFFICMGGTD--IKNLSLQIASELPKTK-IISIATSSS------NPNLKKLQKFAKLHNNIRLFIDHENIAKLMNES 226 (282)
T ss_dssp CCEEEEEECCSCC--TTCHHHHHHHHSCTTS-CEEEEECTT------CTTHHHHHHHHHTCSSEEEEESCSCHHHHHHTE
T ss_pred cCCeEEEEECCCc--hhhHHHHHHHHhhcCC-CEEEEECCC------chHHHHHHHHHhhCCCEEEEeCHHHHHHHHHHC
Confidence 3568999999643 3346667777776544 677777765 22334444322 3588899999987 599776
Q ss_pred CcccceeccCCchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeec
Q 012314 345 SIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDR 396 (466)
Q Consensus 345 ~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~ 396 (466)
++ +||+|| +|++|+++.|+|+|.+|...+|..||+.+++ .|++..+..
T Consensus 227 Dl--vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~-~G~~~~~~~ 274 (282)
T 3hbm_A 227 NK--LIISAS-SLVNEALLLKANFKAICYVKNQESTATWLAK-KGYEVEYKY 274 (282)
T ss_dssp EE--EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHHH-TTCEEECGG
T ss_pred CE--EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHH-CCCEEEcch
Confidence 66 999999 8999999999999999999999999999999 599999863
|
| >2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A | Back alignment and structure |
|---|
Probab=99.59 E-value=1.7e-15 Score=131.78 Aligned_cols=131 Identities=8% Similarity=0.041 Sum_probs=94.0
Q ss_pred CCCeEEEEEeccccccCHHHHHHH-----HHHHHhCC-CCEEEEEcCCCCCCCCCCCchhHHHHh---------c-----
Q 012314 267 QPSSVVYVSFGSFTILDQVQFQEL-----ALGLELCK-RPFLWVVRPDITTDANDRYPEGFQERV---------A----- 326 (466)
Q Consensus 267 ~~~~~v~vs~Gs~~~~~~~~~~~~-----~~a~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~---------~----- 326 (466)
++++.|||+.||... -.+.+..+ ++++...+ .++++.++.... + ..+.+.+.. +
T Consensus 26 ~~~~~VlVtgGS~~~-~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~----~-~~~~~~~~~~~~~~~~l~p~~~~~ 99 (224)
T 2jzc_A 26 IEEKALFVTCGATVP-FPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYS----S-EFEHLVQERGGQRESQKIPIDQFG 99 (224)
T ss_dssp CCSCCEEEECCSCCS-CHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSC----C-CCCSHHHHHTCEECSCCCSSCTTC
T ss_pred CCCCEEEEEcCCchH-HHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCch----h-hHHHHHHhhhcccccccccccccc
Confidence 456799999999732 23334433 47887777 789999986621 0 111111111 1
Q ss_pred ------------C--Cceeecccchh-hhhc-CCCcccceeccCCchhhhhhhcCcceeecccc----cchhhhHHHHHH
Q 012314 327 ------------A--RGQMISWAPQL-RVLN-HPSIACFLSHCGWNSTMEGVSNGIPFLCWPYF----GDQFLNERYICD 386 (466)
Q Consensus 327 ------------~--n~~~~~~~p~~-~ll~-~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~----~DQ~~~a~rv~~ 386 (466)
. ++.+.+|++++ ++|. .+++ +|||||+||++|++++|+|+|++|.. .+|..||+++++
T Consensus 100 ~~~~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~ 177 (224)
T 2jzc_A 100 CGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVE 177 (224)
T ss_dssp TTCSCEEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHH
T ss_pred ccccccccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHH
Confidence 2 33456888876 6997 7776 99999999999999999999999984 479999999999
Q ss_pred hhhceeEeecCCCCCcCHHHHHHHHHHH
Q 012314 387 FWKVGLKFDRDEGGIITREEIKNKVDQV 414 (466)
Q Consensus 387 ~~G~G~~l~~~~~~~~~~~~l~~~i~~l 414 (466)
.|+|+.+ +++.|.++|.++
T Consensus 178 -~G~~~~~--------~~~~L~~~i~~l 196 (224)
T 2jzc_A 178 -LGYVWSC--------APTETGLIAGLR 196 (224)
T ss_dssp -HSCCCEE--------CSCTTTHHHHHH
T ss_pred -CCCEEEc--------CHHHHHHHHHHH
Confidence 5999876 346677777776
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=1.2e-12 Score=126.39 Aligned_cols=350 Identities=12% Similarity=0.038 Sum_probs=194.5
Q ss_pred CCCCEEEEEcC--C--CccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCc
Q 012314 1 MSRPRVLVMPA--P--AQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRN 76 (466)
Q Consensus 1 m~~~~il~~~~--~--~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (466)
|+++||++++. + ..|.-..+..+++.| +||+|++++............ ...++..+.++......
T Consensus 2 ~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~---- 70 (394)
T 3okp_A 2 SASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYD-----KTLDYEVIRWPRSVMLP---- 70 (394)
T ss_dssp --CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHH-----TTCSSEEEEESSSSCCS----
T ss_pred CCCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhc-----cccceEEEEcccccccc----
Confidence 67889999984 3 458888899999999 799999999976654211111 12467777766421111
Q ss_pred cHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCch--hHHHHHHHcCCceEE-eccchhHHHHHHhhcccccc
Q 012314 77 DLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIG--WSMEIAKKMNVRGAV-FWPSSAASVALVFRIPKLID 153 (466)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~--~~~~~A~~lgiP~v~-~~~~~~~~~~~~~~~p~~~~ 153 (466)
.. .....+.++++. .+||+|++....+ ....+++.+++|.++ .......
T Consensus 71 ~~---------~~~~~l~~~~~~------~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~------------- 122 (394)
T 3okp_A 71 TP---------TTAHAMAEIIRE------REIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEV------------- 122 (394)
T ss_dssp CH---------HHHHHHHHHHHH------TTCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHH-------------
T ss_pred ch---------hhHHHHHHHHHh------cCCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchh-------------
Confidence 00 112234555555 7899999865433 456678889998544 3332211
Q ss_pred cCccCCCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHHHhhc--C
Q 012314 154 DGIIDSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTF--P 231 (466)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~~~~~--p 231 (466)
.+. .. ........ .....+|.+++.|....+.-..... .
T Consensus 123 --------------------------------~~~-~~---~~~~~~~~---~~~~~~d~ii~~s~~~~~~~~~~~~~~~ 163 (394)
T 3okp_A 123 --------------------------------GWS-ML---PGSRQSLR---KIGTEVDVLTYISQYTLRRFKSAFGSHP 163 (394)
T ss_dssp --------------------------------HHT-TS---HHHHHHHH---HHHHHCSEEEESCHHHHHHHHHHHCSSS
T ss_pred --------------------------------hhh-hc---chhhHHHH---HHHHhCCEEEEcCHHHHHHHHHhcCCCC
Confidence 000 00 00011111 1236789999999876654422222 3
Q ss_pred CcceeccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhC-----CCCEEEEEc
Q 012314 232 ELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELC-----KRPFLWVVR 306 (466)
Q Consensus 232 ~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~-----~~~~i~~~~ 306 (466)
++..|..-....... .........+.+.+.- +++..+++..|+.. +......+++++..+ +.+++++ +
T Consensus 164 ~~~vi~ngv~~~~~~---~~~~~~~~~~~~~~~~-~~~~~~i~~~G~~~--~~Kg~~~li~a~~~l~~~~~~~~l~i~-G 236 (394)
T 3okp_A 164 TFEHLPSGVDVKRFT---PATPEDKSATRKKLGF-TDTTPVIACNSRLV--PRKGQDSLIKAMPQVIAARPDAQLLIV-G 236 (394)
T ss_dssp EEEECCCCBCTTTSC---CCCHHHHHHHHHHTTC-CTTCCEEEEESCSC--GGGCHHHHHHHHHHHHHHSTTCEEEEE-C
T ss_pred CeEEecCCcCHHHcC---CCCchhhHHHHHhcCC-CcCceEEEEEeccc--cccCHHHHHHHHHHHHhhCCCeEEEEE-c
Confidence 455454322221110 0000011112222222 22336677778752 222334444444322 3454443 4
Q ss_pred CCCCCCCCCCCchhHHH---HhcCCceeecccchh---hhhcCCCccccee-----------ccCCchhhhhhhcCccee
Q 012314 307 PDITTDANDRYPEGFQE---RVAARGQMISWAPQL---RVLNHPSIACFLS-----------HCGWNSTMEGVSNGIPFL 369 (466)
Q Consensus 307 ~~~~~~~~~~~~~~~~~---~~~~n~~~~~~~p~~---~ll~~~~~~~~i~-----------hgG~~s~~eal~~GvP~l 369 (466)
.+ ...+.+.+ ...+++.+.+|+|+. .++..+++ +|. -|..+++.||+++|+|+|
T Consensus 237 ~g-------~~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI 307 (394)
T 3okp_A 237 SG-------RYESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADI--FAMPARTRGGGLDVEGLGIVYLEAQACGVPVI 307 (394)
T ss_dssp CC-------TTHHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCSE--EEECCCCBGGGTBCCSSCHHHHHHHHTTCCEE
T ss_pred Cc-------hHHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCCE--EEecCccccccccccccCcHHHHHHHcCCCEE
Confidence 33 12233322 234788899999765 47877777 665 455678899999999999
Q ss_pred ecccccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHH
Q 012314 370 CWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALELKEKAMSSVREGGSSYKTFQNFL 449 (466)
Q Consensus 370 ~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v 449 (466)
+.+.. .....+.+ |.|..+++ -+.++++++|.++++|++.+++..+-+.... .+.-+.....+++.
T Consensus 308 ~~~~~----~~~e~i~~--~~g~~~~~-----~d~~~l~~~i~~l~~~~~~~~~~~~~~~~~~---~~~~s~~~~~~~~~ 373 (394)
T 3okp_A 308 AGTSG----GAPETVTP--ATGLVVEG-----SDVDKLSELLIELLDDPIRRAAMGAAGRAHV---EAEWSWEIMGERLT 373 (394)
T ss_dssp ECSST----TGGGGCCT--TTEEECCT-----TCHHHHHHHHHHHHTCHHHHHHHHHHHHHHH---HHHTBHHHHHHHHH
T ss_pred EeCCC----ChHHHHhc--CCceEeCC-----CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH---HHhCCHHHHHHHHH
Confidence 98643 33334443 67887743 4799999999999999876654433322222 22346677777777
Q ss_pred HHHHHhccc
Q 012314 450 QWVKTNALA 458 (466)
Q Consensus 450 ~~~~~~~~~ 458 (466)
+.+.+....
T Consensus 374 ~~~~~~~r~ 382 (394)
T 3okp_A 374 NILQSEPRK 382 (394)
T ss_dssp HHHHSCCC-
T ss_pred HHHHHhccC
Confidence 777777433
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=4.1e-12 Score=124.65 Aligned_cols=345 Identities=12% Similarity=0.042 Sum_probs=177.1
Q ss_pred CCCEEEEEcC-----------CCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCC
Q 012314 2 SRPRVLVMPA-----------PAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGME 70 (466)
Q Consensus 2 ~~~~il~~~~-----------~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (466)
++|||++++. ...|+-..+..++++|.++||+|++++.......... .....+++++.++....
T Consensus 19 ~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~-----~~~~~~v~v~~~~~~~~ 93 (438)
T 3c48_A 19 SHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEI-----VRVAENLRVINIAAGPY 93 (438)
T ss_dssp CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCSE-----EEEETTEEEEEECCSCS
T ss_pred chheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCccc-----ccccCCeEEEEecCCCc
Confidence 5789999995 2358888999999999999999999997643221000 00114677777663211
Q ss_pred CCCCCccHHHHHHHHHHhccHHHHHHHHH-HhcCCCCCccEEEeCCCch--hHHHHHHHcCCceEEeccchhHHHHHHhh
Q 012314 71 PWEDRNDLGKLIEKCLQVMPGKLEELIEE-INSREDEKIDCFIADGNIG--WSMEIAKKMNVRGAVFWPSSAASVALVFR 147 (466)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~-l~~~~~~~~DlvV~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~~~ 147 (466)
...........+..+ .+.+++. ++.. .+||+|++..... .+..+++.+++|+|...+........
T Consensus 94 ~~~~~~~~~~~~~~~-------~~~~~~~~~~~~--~~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~--- 161 (438)
T 3c48_A 94 EGLSKEELPTQLAAF-------TGGMLSFTRREK--VTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAAVKNS--- 161 (438)
T ss_dssp SSCCGGGGGGGHHHH-------HHHHHHHHHHHT--CCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSSCHHHHSC---
T ss_pred cccchhHHHHHHHHH-------HHHHHHHHHhcc--CCCCEEEeCCccHHHHHHHHHHHcCCCEEEEecCCcccccc---
Confidence 111111111111111 1122222 2221 2499999875322 34456788899999876544320000
Q ss_pred cccccccCccCCCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHHH
Q 012314 148 IPKLIDDGIIDSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAF 227 (466)
Q Consensus 148 ~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~~ 227 (466)
. +. . ............. ......+|.+++.|....+.-..
T Consensus 162 --------------------------~--------~~-~---~~~~~~~~~~~~~--~~~~~~~d~ii~~s~~~~~~~~~ 201 (438)
T 3c48_A 162 --------------------------Y--------RD-D---SDTPESEARRICE--QQLVDNADVLAVNTQEEMQDLMH 201 (438)
T ss_dssp --------------------------C----------------CCHHHHHHHHHH--HHHHHHCSEEEESSHHHHHHHHH
T ss_pred --------------------------c--------cc-c---cCCcchHHHHHHH--HHHHhcCCEEEEcCHHHHHHHHH
Confidence 0 00 0 0000000011111 11336789999999876654322
Q ss_pred hh--c-CCcceeccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHH----hCC-C
Q 012314 228 TT--F-PELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLE----LCK-R 299 (466)
Q Consensus 228 ~~--~-p~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~----~~~-~ 299 (466)
.+ . .++..|..-....... + ........+..-+.-.+ +..+++..|+... ......+++++. +.+ .
T Consensus 202 ~~g~~~~k~~vi~ngvd~~~~~-~--~~~~~~~~~r~~~~~~~-~~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~p~~ 275 (438)
T 3c48_A 202 HYDADPDRISVVSPGADVELYS-P--GNDRATERSRRELGIPL-HTKVVAFVGRLQP--FKGPQVLIKAVAALFDRDPDR 275 (438)
T ss_dssp HHCCCGGGEEECCCCCCTTTSC-C--C----CHHHHHHTTCCS-SSEEEEEESCBSG--GGCHHHHHHHHHHHHHHCTTC
T ss_pred HhCCChhheEEecCCccccccC-C--cccchhhhhHHhcCCCC-CCcEEEEEeeecc--cCCHHHHHHHHHHHHhhCCCc
Confidence 12 1 2344454322211110 0 00000001222222112 3366777787632 223333444442 221 2
Q ss_pred CE-EEEEcCCCCCCCCCCCchhHHH---H--hcCCceeecccchh---hhhcCCCcccceec----cCCchhhhhhhcCc
Q 012314 300 PF-LWVVRPDITTDANDRYPEGFQE---R--VAARGQMISWAPQL---RVLNHPSIACFLSH----CGWNSTMEGVSNGI 366 (466)
Q Consensus 300 ~~-i~~~~~~~~~~~~~~~~~~~~~---~--~~~n~~~~~~~p~~---~ll~~~~~~~~i~h----gG~~s~~eal~~Gv 366 (466)
.+ ++.++..... ....+.+.+ + ..+++.+.+++|+. .++..+++ +|.- |...++.||+++|+
T Consensus 276 ~~~l~i~G~~~~~---g~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~ 350 (438)
T 3c48_A 276 NLRVIICGGPSGP---NATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADI--VAVPSFNESFGLVAMEAQASGT 350 (438)
T ss_dssp SEEEEEECCBC---------CHHHHHHHHTTCTTTEEEECCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHHTTC
T ss_pred ceEEEEEeCCCCC---CcHHHHHHHHHHHcCCCCcEEEcCCCChHHHHHHHHhCCE--EEECccccCCchHHHHHHHcCC
Confidence 33 3334431000 011222322 2 23688899999864 57877777 6653 33468899999999
Q ss_pred ceeecccccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHH
Q 012314 367 PFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARA 424 (466)
Q Consensus 367 P~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a 424 (466)
|+|+.+ .......+.+. +.|..+++ -+.++|+++|.++++|++.+++.
T Consensus 351 PvI~~~----~~~~~e~i~~~-~~g~~~~~-----~d~~~la~~i~~l~~~~~~~~~~ 398 (438)
T 3c48_A 351 PVIAAR----VGGLPIAVAEG-ETGLLVDG-----HSPHAWADALATLLDDDETRIRM 398 (438)
T ss_dssp CEEEES----CTTHHHHSCBT-TTEEEESS-----CCHHHHHHHHHHHHHCHHHHHHH
T ss_pred CEEecC----CCChhHHhhCC-CcEEECCC-----CCHHHHHHHHHHHHcCHHHHHHH
Confidence 999975 44556666653 67888843 47999999999999988665543
|
| >3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.52 E-value=9.4e-14 Score=134.19 Aligned_cols=324 Identities=12% Similarity=0.065 Sum_probs=168.8
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhC--CCEEEEEeCCcch---HHHHHhhhcCCCCCCCeEE-EecCCCCCCCCC
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKH--GFRVTFVNTDYNH---KRVVESLQGKNYLGEQIHL-VSIPDGMEPWED 74 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~r--Gh~Vt~~~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 74 (466)
|+|+||++++ +......=+..|.++|.++ |+++.++.+.... +.+.+. -++.. +.+. +.. .
T Consensus 25 m~~~kI~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~~tG~h~~m~~~~~~~--------~~i~~~~~l~--v~~--~ 91 (403)
T 3ot5_A 25 MAKIKVMSIF-GTRPEAIKMAPLVLALEKEPETFESTVVITAQHREMLDQVLEI--------FDIKPDIDLD--IMK--K 91 (403)
T ss_dssp -CCEEEEEEE-CSHHHHHHHHHHHHHHHTCTTTEEEEEEECC-----CHHHHHH--------TTCCCSEECC--CCC---
T ss_pred cccceEEEEE-ecChhHHHHHHHHHHHHhCCCCCcEEEEEecCcHHHHHHHHHh--------cCCCCCcccc--cCC--C
Confidence 6777888887 5665666678899999987 6888777665432 111111 12210 1111 100 1
Q ss_pred CccHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeC--CCc-hhHHHHHHHcCCceEEeccchhHHHHHHhhcccc
Q 012314 75 RNDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIAD--GNI-GWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKL 151 (466)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D--~~~-~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~ 151 (466)
...... .+ ......+.+++++ .+||+|++- ... .++..+|..+|||++.+....-
T Consensus 92 ~~~~~~---~~-~~~~~~l~~~l~~------~kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~~aglr------------ 149 (403)
T 3ot5_A 92 GQTLAE---IT-SRVMNGINEVIAA------ENPDIVLVHGDTTTSFAAGLATFYQQKMLGHVEAGLR------------ 149 (403)
T ss_dssp CCCHHH---HH-HHHHHHHHHHHHH------HCCSEEEEETTCHHHHHHHHHHHHTTCEEEEESCCCC------------
T ss_pred CCCHHH---HH-HHHHHHHHHHHHH------cCCCEEEEECCchhHHHHHHHHHHhCCCEEEEECCcc------------
Confidence 112222 11 2223346666666 789999972 222 3457789999999876431100
Q ss_pred cccCccCCCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHHHhh--
Q 012314 152 IDDGIIDSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTT-- 229 (466)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~~~~-- 229 (466)
.+ ..+. +........... ..++.+++.+...-+.-...-
T Consensus 150 -------------------------s~-------~~~~-~~p~~~~r~~~~------~~a~~~~~~se~~~~~l~~~Gi~ 190 (403)
T 3ot5_A 150 -------------------------TW-------NKYS-PFPEEMNRQLTG------VMADIHFSPTKQAKENLLAEGKD 190 (403)
T ss_dssp -------------------------CS-------CTTS-STTHHHHHHHHH------HHCSEEEESSHHHHHHHHHTTCC
T ss_pred -------------------------cc-------cccc-CCcHHHHHHHHH------HhcCEEECCCHHHHHHHHHcCCC
Confidence 00 0000 000011111111 235667777655433221111
Q ss_pred cCCcceeccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHh-----CCCCEEEE
Q 012314 230 FPELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLEL-----CKRPFLWV 304 (466)
Q Consensus 230 ~p~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~-----~~~~~i~~ 304 (466)
..+++.||....+..... . ......+..+.+ ++++.++++.|...... +.+..+++++.. .+.++++.
T Consensus 191 ~~~i~vvGn~~~D~~~~~--~-~~~~~~~~~~~l---~~~~~vlv~~~r~~~~~-~~l~~ll~a~~~l~~~~~~~~~v~~ 263 (403)
T 3ot5_A 191 PATIFVTGNTAIDALKTT--V-QKDYHHPILENL---GDNRLILMTAHRRENLG-EPMQGMFEAVREIVESREDTELVYP 263 (403)
T ss_dssp GGGEEECCCHHHHHHHHH--S-CTTCCCHHHHSC---TTCEEEEECCCCHHHHT-THHHHHHHHHHHHHHHCTTEEEEEE
T ss_pred cccEEEeCCchHHHHHhh--h-hhhcchHHHHhc---cCCCEEEEEeCcccccC-cHHHHHHHHHHHHHHhCCCceEEEe
Confidence 235777774221110000 0 000011222222 34567777766422111 124555555532 23455555
Q ss_pred EcCCCCCCCCCCCchhHHHHh--cCCceeecccch---hhhhcCCCcccceeccCCchhhhhhhcCcceeecccccchhh
Q 012314 305 VRPDITTDANDRYPEGFQERV--AARGQMISWAPQ---LRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFL 379 (466)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~--~~n~~~~~~~p~---~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~ 379 (466)
.+.+ ..+.+.+.+.. .+++.+.+++++ ..++..+++ +|+..|..+ .||.++|+|+|++|-..+++.
T Consensus 264 ~~~~------~~~~~~l~~~~~~~~~v~l~~~l~~~~~~~l~~~ad~--vv~~SGg~~-~EA~a~g~PvV~~~~~~~~~e 334 (403)
T 3ot5_A 264 MHLN------PAVREKAMAILGGHERIHLIEPLDAIDFHNFLRKSYL--VFTDSGGVQ-EEAPGMGVPVLVLRDTTERPE 334 (403)
T ss_dssp CCSC------HHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHEEE--EEECCHHHH-HHGGGTTCCEEECCSSCSCHH
T ss_pred cCCC------HHHHHHHHHHhCCCCCEEEeCCCCHHHHHHHHHhcCE--EEECCccHH-HHHHHhCCCEEEecCCCcchh
Confidence 4422 11222233212 368888888864 468877776 998875333 799999999999976666554
Q ss_pred hHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHH
Q 012314 380 NERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARAL 425 (466)
Q Consensus 380 ~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~ 425 (466)
. + +. |.|+.+. .++++|.+++.++++|++.++++.
T Consensus 335 ~---v-~~-g~~~lv~------~d~~~l~~ai~~ll~~~~~~~~m~ 369 (403)
T 3ot5_A 335 G---I-EA-GTLKLIG------TNKENLIKEALDLLDNKESHDKMA 369 (403)
T ss_dssp H---H-HH-TSEEECC------SCHHHHHHHHHHHHHCHHHHHHHH
T ss_pred h---e-eC-CcEEEcC------CCHHHHHHHHHHHHcCHHHHHHHH
Confidence 2 3 53 9888773 279999999999999988776554
|
| >3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.51 E-value=1.8e-13 Score=131.99 Aligned_cols=326 Identities=11% Similarity=0.060 Sum_probs=172.3
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhC-CCEEEEEeCCcchH---HHHHhhhcCCCCCCCeE-EEecCCCCCCCCCC
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKH-GFRVTFVNTDYNHK---RVVESLQGKNYLGEQIH-LVSIPDGMEPWEDR 75 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~r-Gh~Vt~~~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 75 (466)
|+++||++++ +......-+..|.++|.++ |+++.++.+....+ .+.+. .+++ .+.+. +.. ..
T Consensus 23 ~~m~ki~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~tG~h~~~~~~~~~~--------~~i~~~~~l~--~~~--~~ 89 (396)
T 3dzc_A 23 NAMKKVLIVF-GTRPEAIKMAPLVQQLCQDNRFVAKVCVTGQHREMLDQVLEL--------FSITPDFDLN--IME--PG 89 (396)
T ss_dssp -CCEEEEEEE-CSHHHHHHHHHHHHHHHHCTTEEEEEEECCSSSHHHHHHHHH--------TTCCCSEECC--CCC--TT
T ss_pred CCCCeEEEEE-eccHhHHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHh--------cCCCCceeee--cCC--CC
Confidence 5677888877 6666777788899999987 78987666654432 12111 1221 01111 100 11
Q ss_pred ccHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEe--CCCc-hhHHHHHHHcCCceEEeccchhHHHHHHhhccccc
Q 012314 76 NDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIA--DGNI-GWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLI 152 (466)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~--D~~~-~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~ 152 (466)
...... . ......+.+++++ .+||+|++ |... ..+..+|..+|||++.+....-
T Consensus 90 ~~~~~~---~-~~~~~~l~~~l~~------~kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~~ag~r------------- 146 (396)
T 3dzc_A 90 QTLNGV---T-SKILLGMQQVLSS------EQPDVVLVHGDTATTFAASLAAYYQQIPVGHVEAGLR------------- 146 (396)
T ss_dssp CCHHHH---H-HHHHHHHHHHHHH------HCCSEEEEETTSHHHHHHHHHHHTTTCCEEEETCCCC-------------
T ss_pred CCHHHH---H-HHHHHHHHHHHHh------cCCCEEEEECCchhHHHHHHHHHHhCCCEEEEECCcc-------------
Confidence 122221 1 2223346666666 78999987 3333 2456788999999876431000
Q ss_pred ccCccCCCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHHHhh--c
Q 012314 153 DDGIIDSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTT--F 230 (466)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~~~~--~ 230 (466)
.+ .+. .+.......... ...++.+++.+...-+.-...- .
T Consensus 147 ------------------------s~-------~~~-~~~~~~~~r~~~------~~~a~~~~~~se~~~~~l~~~G~~~ 188 (396)
T 3dzc_A 147 ------------------------TG-------NIY-SPWPEEGNRKLT------AALTQYHFAPTDTSRANLLQENYNA 188 (396)
T ss_dssp ------------------------CS-------CTT-SSTTHHHHHHHH------HHTCSEEEESSHHHHHHHHHTTCCG
T ss_pred ------------------------cc-------ccc-cCCcHHHHHHHH------HHhcCEEECCCHHHHHHHHHcCCCc
Confidence 00 000 000001111110 1346777777765433221111 1
Q ss_pred CCcceeccccCCCCCCCCCCCcccC-------Cccchhhhc-cCCCCeEEEEEeccccccCHHHHHHHHHHHHhC-----
Q 012314 231 PELLPIGPLLASNRLGNTAGYFWCE-------DSNCLKWLD-QQQPSSVVYVSFGSFTILDQVQFQELALGLELC----- 297 (466)
Q Consensus 231 p~v~~VGpl~~~~~~~~~~~~~~~~-------~~~l~~~~~-~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~----- 297 (466)
.+++.||....+.... ..+. ..++.+.+. -.++++.|+++.+-...... .+..+++|+..+
T Consensus 189 ~ki~vvGn~~~d~~~~-----~~~~~~~~~~~~~~~r~~lg~l~~~~~~vlv~~hR~~~~~~-~~~~ll~A~~~l~~~~~ 262 (396)
T 3dzc_A 189 ENIFVTGNTVIDALLA-----VREKIHTDMDLQATLESQFPMLDASKKLILVTGHRRESFGG-GFERICQALITTAEQHP 262 (396)
T ss_dssp GGEEECCCHHHHHHHH-----HHHHHHHCHHHHHHHHHTCTTCCTTSEEEEEECSCBCCCTT-HHHHHHHHHHHHHHHCT
T ss_pred CcEEEECCcHHHHHHH-----hhhhcccchhhHHHHHHHhCccCCCCCEEEEEECCcccchh-HHHHHHHHHHHHHHhCC
Confidence 2577787322111000 0000 012222222 11335677776532222222 245666666432
Q ss_pred CCCEEEEEcCCCCCCCCCCCchhHHHH--hcCCceeecccch---hhhhcCCCcccceeccCCchhhhhhhcCcceeecc
Q 012314 298 KRPFLWVVRPDITTDANDRYPEGFQER--VAARGQMISWAPQ---LRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWP 372 (466)
Q Consensus 298 ~~~~i~~~~~~~~~~~~~~~~~~~~~~--~~~n~~~~~~~p~---~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P 372 (466)
+.++++..+.+ +.+.+.+.+. ..+++.+.+++++ ..++..+++ +|+-.| |.+.||.++|+|+|++.
T Consensus 263 ~~~~v~~~g~~------~~~~~~l~~~~~~~~~v~~~~~lg~~~~~~l~~~ad~--vv~~SG-g~~~EA~a~G~PvV~~~ 333 (396)
T 3dzc_A 263 ECQILYPVHLN------PNVREPVNKLLKGVSNIVLIEPQQYLPFVYLMDRAHI--ILTDSG-GIQEEAPSLGKPVLVMR 333 (396)
T ss_dssp TEEEEEECCBC------HHHHHHHHHHTTTCTTEEEECCCCHHHHHHHHHHCSE--EEESCS-GGGTTGGGGTCCEEECC
T ss_pred CceEEEEeCCC------hHHHHHHHHHHcCCCCEEEeCCCCHHHHHHHHHhcCE--EEECCc-cHHHHHHHcCCCEEEcc
Confidence 44555544422 1122333332 1367888777753 468877777 999887 66689999999999985
Q ss_pred cccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHH
Q 012314 373 YFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALE 426 (466)
Q Consensus 373 ~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~ 426 (466)
-..+.+. +.+. |.++.+. . ++++|.+++.++++|++.++++.+
T Consensus 334 ~~~~~~e----~v~~-G~~~lv~----~--d~~~l~~ai~~ll~d~~~~~~m~~ 376 (396)
T 3dzc_A 334 ETTERPE----AVAA-GTVKLVG----T--NQQQICDALSLLLTDPQAYQAMSQ 376 (396)
T ss_dssp SSCSCHH----HHHH-TSEEECT----T--CHHHHHHHHHHHHHCHHHHHHHHT
T ss_pred CCCcchH----HHHc-CceEEcC----C--CHHHHHHHHHHHHcCHHHHHHHhh
Confidence 4445432 3353 8886663 2 699999999999999887765543
|
| >1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3 | Back alignment and structure |
|---|
Probab=99.50 E-value=4.9e-13 Score=128.50 Aligned_cols=136 Identities=13% Similarity=0.114 Sum_probs=86.6
Q ss_pred CeEEEEEeccccccCHHHHHHHHHHHHhC-----CCCEEEEEcCCCCCCCCCCCchhHHHHh--cCCceeecccch---h
Q 012314 269 SSVVYVSFGSFTILDQVQFQELALGLELC-----KRPFLWVVRPDITTDANDRYPEGFQERV--AARGQMISWAPQ---L 338 (466)
Q Consensus 269 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~-----~~~~i~~~~~~~~~~~~~~~~~~~~~~~--~~n~~~~~~~p~---~ 338 (466)
++.|+++.|...... .+..+++|+..+ +.++++..+.+ ....+.+.+.. .+++.+.+++++ .
T Consensus 198 ~~~vl~~~gr~~~~k--~~~~ll~a~~~l~~~~~~~~lv~~~g~~------~~~~~~l~~~~~~~~~v~~~g~~g~~~~~ 269 (376)
T 1v4v_A 198 GPYVTVTMHRRENWP--LLSDLAQALKRVAEAFPHLTFVYPVHLN------PVVREAVFPVLKGVRNFVLLDPLEYGSMA 269 (376)
T ss_dssp SCEEEECCCCGGGGG--GHHHHHHHHHHHHHHCTTSEEEEECCSC------HHHHHHHHHHHTTCTTEEEECCCCHHHHH
T ss_pred CCEEEEEeCcccchH--HHHHHHHHHHHHHhhCCCeEEEEECCCC------HHHHHHHHHHhccCCCEEEECCCCHHHHH
Confidence 457777777542221 345555665432 34544443433 11223333322 257888855554 4
Q ss_pred hhhcCCCcccceeccCCchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCH
Q 012314 339 RVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQ 418 (466)
Q Consensus 339 ~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~ 418 (466)
.++..+++ ||+.+| |.+.||+++|+|+|+.+...++... .+. |.|..+. .++++|+++|.++++|+
T Consensus 270 ~~~~~ad~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~~----~~~-g~g~lv~------~d~~~la~~i~~ll~d~ 335 (376)
T 1v4v_A 270 ALMRASLL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPEG----LKA-GILKLAG------TDPEGVYRVVKGLLENP 335 (376)
T ss_dssp HHHHTEEE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHHH----HHH-TSEEECC------SCHHHHHHHHHHHHTCH
T ss_pred HHHHhCcE--EEECCc-CHHHHHHHcCCCEEeccCCCcchhh----hcC-CceEECC------CCHHHHHHHHHHHHhCh
Confidence 78977777 998874 4466999999999998866666553 343 8888773 28999999999999998
Q ss_pred HHHHHHHH
Q 012314 419 DFKARALE 426 (466)
Q Consensus 419 ~~r~~a~~ 426 (466)
+.+++..+
T Consensus 336 ~~~~~~~~ 343 (376)
T 1v4v_A 336 EELSRMRK 343 (376)
T ss_dssp HHHHHHHH
T ss_pred Hhhhhhcc
Confidence 76665443
|
| >1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* | Back alignment and structure |
|---|
Probab=99.45 E-value=6.2e-13 Score=128.15 Aligned_cols=136 Identities=14% Similarity=0.116 Sum_probs=86.5
Q ss_pred CCeEEEEEeccccccCHHHHHHHHHHHHh----C-CCCEEEEEcCCCCCCCCCCCchhHHHHh--cCCceeecccch---
Q 012314 268 PSSVVYVSFGSFTILDQVQFQELALGLEL----C-KRPFLWVVRPDITTDANDRYPEGFQERV--AARGQMISWAPQ--- 337 (466)
Q Consensus 268 ~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~----~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~--~~n~~~~~~~p~--- 337 (466)
+++.++++.|...... ..+..+++|+.. . +.++++..+.+ ....+.+.+.. .+++.+.+++++
T Consensus 204 ~~~~vl~~~gr~~~~~-kg~~~li~a~~~l~~~~~~~~l~i~~g~~------~~~~~~l~~~~~~~~~v~~~g~~~~~~~ 276 (384)
T 1vgv_A 204 DKKMILVTGHRRESFG-RGFEEICHALADIATTHQDIQIVYPVHLN------PNVREPVNRILGHVKNVILIDPQEYLPF 276 (384)
T ss_dssp TSEEEEEECCCBSSCC-HHHHHHHHHHHHHHHHCTTEEEEEECCBC------HHHHHHHHHHHTTCTTEEEECCCCHHHH
T ss_pred CCCEEEEEeCCccccc-hHHHHHHHHHHHHHhhCCCeEEEEEcCCC------HHHHHHHHHHhhcCCCEEEeCCCCHHHH
Confidence 3567888888653222 234455555533 2 34444433322 11223333222 268888666654
Q ss_pred hhhhcCCCcccceeccCCchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcC
Q 012314 338 LRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGN 417 (466)
Q Consensus 338 ~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~ 417 (466)
..++..+++ ||+.+| +.+.||+++|+|+|+.+...+... +.+ .|.|..++ . ++++|+++|.++++|
T Consensus 277 ~~~~~~ad~--~v~~Sg-~~~lEA~a~G~PvI~~~~~~~~~e----~v~-~g~g~lv~----~--d~~~la~~i~~ll~d 342 (384)
T 1vgv_A 277 VWLMNHAWL--ILTDSG-GIQEEAPSLGKPVLVMRDTTERPE----AVT-AGTVRLVG----T--DKQRIVEEVTRLLKD 342 (384)
T ss_dssp HHHHHHCSE--EEESSS-TGGGTGGGGTCCEEEESSCCSCHH----HHH-HTSEEEEC----S--SHHHHHHHHHHHHHC
T ss_pred HHHHHhCcE--EEECCc-chHHHHHHcCCCEEEccCCCCcch----hhh-CCceEEeC----C--CHHHHHHHHHHHHhC
Confidence 468877777 998875 448899999999999987444332 345 38898884 2 899999999999999
Q ss_pred HHHHHHH
Q 012314 418 QDFKARA 424 (466)
Q Consensus 418 ~~~r~~a 424 (466)
++.+++.
T Consensus 343 ~~~~~~~ 349 (384)
T 1vgv_A 343 ENEYQAM 349 (384)
T ss_dssp HHHHHHH
T ss_pred hHHHhhh
Confidence 8766543
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=1.1e-12 Score=124.26 Aligned_cols=272 Identities=11% Similarity=0.008 Sum_probs=157.3
Q ss_pred CCCCEEEEEcCC----------------CccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEe
Q 012314 1 MSRPRVLVMPAP----------------AQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVS 64 (466)
Q Consensus 1 m~~~~il~~~~~----------------~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 64 (466)
|++|||++++.. ..|.-.....+++.|.++||+|++++....... ..++....
T Consensus 1 M~~mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~~G~~v~v~~~~~~~~~-----------~~~~~~~~ 69 (342)
T 2iuy_A 1 MRPLKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLELGHEVFLLGAPGSPAG-----------RPGLTVVP 69 (342)
T ss_dssp --CCEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHTTCEEEEESCTTSCCC-----------STTEEECS
T ss_pred CCccEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHHcCCeEEEEecCCCCCC-----------CCcceecc
Confidence 899999999865 257777889999999999999999998643221 12344332
Q ss_pred cCCCCCCCCCCccHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEEeccchhHHHHH
Q 012314 65 IPDGMEPWEDRNDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVAL 144 (466)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~ 144 (466)
.+ .. ..+.++++. .+||+|++...... ..++...++| |...+....
T Consensus 70 ~~----------~~------------~~l~~~l~~------~~~Dvi~~~~~~~~-~~~~~~~~~p-v~~~h~~~~---- 115 (342)
T 2iuy_A 70 AG----------EP------------EEIERWLRT------ADVDVVHDHSGGVI-GPAGLPPGTA-FISSHHFTT---- 115 (342)
T ss_dssp CC----------SH------------HHHHHHHHH------CCCSEEEECSSSSS-CSTTCCTTCE-EEEEECSSS----
T ss_pred CC----------cH------------HHHHHHHHh------cCCCEEEECCchhh-HHHHhhcCCC-EEEecCCCC----
Confidence 11 00 035555555 78999998864432 2236677889 664322110
Q ss_pred HhhcccccccCccCCCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccH
Q 012314 145 VFRIPKLIDDGIIDSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELES 224 (466)
Q Consensus 145 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~ 224 (466)
. . . .++.+++.|....+.
T Consensus 116 -----------------~---------------------~-~-----------------------~~d~ii~~S~~~~~~ 133 (342)
T 2iuy_A 116 -----------------R---------------------P-V-----------------------NPVGCTYSSRAQRAH 133 (342)
T ss_dssp -----------------B---------------------C-S-----------------------CCTTEEESCHHHHHH
T ss_pred -----------------C---------------------c-c-----------------------cceEEEEcCHHHHHH
Confidence 0 0 0 055566666544332
Q ss_pred HHHhhcCCcceeccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhCCCCEEEE
Q 012314 225 EAFTTFPELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWV 304 (466)
Q Consensus 225 ~~~~~~p~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~ 304 (466)
- .. ..++..|..-....... +... ..+++ .+++..|+.. +......++++++.++.+++++
T Consensus 134 ~-~~-~~~~~vi~ngvd~~~~~-------~~~~-------~~~~~-~~i~~vG~~~--~~Kg~~~li~a~~~~~~~l~i~ 194 (342)
T 2iuy_A 134 C-GG-GDDAPVIPIPVDPARYR-------SAAD-------QVAKE-DFLLFMGRVS--PHKGALEAAAFAHACGRRLVLA 194 (342)
T ss_dssp T-TC-CTTSCBCCCCBCGGGSC-------CSTT-------CCCCC-SCEEEESCCC--GGGTHHHHHHHHHHHTCCEEEE
T ss_pred H-hc-CCceEEEcCCCChhhcC-------cccc-------cCCCC-CEEEEEeccc--cccCHHHHHHHHHhcCcEEEEE
Confidence 2 11 22333332111111000 0000 00112 2445567653 3445667777777777776655
Q ss_pred EcCCCCCCCCCCCchhHHHHhcCCceeecccchh---hhhcCCCccccee--c-----------cC-CchhhhhhhcCcc
Q 012314 305 VRPDITTDANDRYPEGFQERVAARGQMISWAPQL---RVLNHPSIACFLS--H-----------CG-WNSTMEGVSNGIP 367 (466)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~---~ll~~~~~~~~i~--h-----------gG-~~s~~eal~~GvP 367 (466)
..+. ..+.+ +.+.++..+++.+.+|+|+. .++..+++ +|. . -| ..++.||+++|+|
T Consensus 195 G~g~----~~~~l-~~~~~~~~~~v~~~g~~~~~~l~~~~~~adv--~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~P 267 (342)
T 2iuy_A 195 GPAW----EPEYF-DEITRRYGSTVEPIGEVGGERRLDLLASAHA--VLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTP 267 (342)
T ss_dssp SCCC----CHHHH-HHHHHHHTTTEEECCCCCHHHHHHHHHHCSE--EEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCC
T ss_pred eCcc----cHHHH-HHHHHHhCCCEEEeccCCHHHHHHHHHhCCE--EEECCcccccccccccccCccHHHHHHHhcCCC
Confidence 3322 00111 12333345889999999976 58877777 662 2 33 4578999999999
Q ss_pred eeecccccchhhhHHHHHH--hhhceeEeecCCCCCcCHHHHHHHHHHHhc
Q 012314 368 FLCWPYFGDQFLNERYICD--FWKVGLKFDRDEGGIITREEIKNKVDQVLG 416 (466)
Q Consensus 368 ~l~~P~~~DQ~~~a~rv~~--~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~ 416 (466)
+|+... ......+++ . +.|..+ .. +.++++++|.++++
T Consensus 268 vI~s~~----~~~~e~~~~~~~-~~g~~~-----~~-d~~~l~~~i~~l~~ 307 (342)
T 2iuy_A 268 VVGTGN----GCLAEIVPSVGE-VVGYGT-----DF-APDEARRTLAGLPA 307 (342)
T ss_dssp EEECCT----TTHHHHGGGGEE-ECCSSS-----CC-CHHHHHHHHHTSCC
T ss_pred EEEcCC----CChHHHhcccCC-CceEEc-----CC-CHHHHHHHHHHHHH
Confidence 999854 445565554 3 467766 34 89999999999996
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=6.9e-11 Score=117.99 Aligned_cols=384 Identities=14% Similarity=0.074 Sum_probs=192.1
Q ss_pred CCC-CEEEEEcCC---------------CccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCC--CCCeEE
Q 012314 1 MSR-PRVLVMPAP---------------AQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYL--GEQIHL 62 (466)
Q Consensus 1 m~~-~~il~~~~~---------------~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 62 (466)
|++ |||++++.. ..|.-..+..++++|+++||+|++++.................. ..++++
T Consensus 4 m~~~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~gv~v 83 (499)
T 2r60_A 4 MTRIKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIKDENWPEFSGEIDYYQETNKVRI 83 (499)
T ss_dssp ---CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECCCBTTBGGGCCSEEECTTCSSEEE
T ss_pred ccccceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEEeCCCCcccccchhhhHHhccCCCCeEE
Confidence 554 799999852 35777889999999999999999999754321100000000000 247888
Q ss_pred EecCCCCCCCCCCccHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCch--hHHHHHHHcCCceEEeccchhH
Q 012314 63 VSIPDGMEPWEDRNDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIG--WSMEIAKKMNVRGAVFWPSSAA 140 (466)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~--~~~~~A~~lgiP~v~~~~~~~~ 140 (466)
+.++...............+..+ ...+.++++.. . .+||+|.+-.... .+..+++.+|+|+|...+....
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~~l~~~---~-~~~Divh~~~~~~~~~~~~~~~~~~~p~v~~~H~~~~ 155 (499)
T 2r60_A 84 VRIPFGGDKFLPKEELWPYLHEY----VNKIINFYREE---G-KFPQVVTTHYGDGGLAGVLLKNIKGLPFTFTGHSLGA 155 (499)
T ss_dssp EEECCSCSSCCCGGGCGGGHHHH----HHHHHHHHHHH---T-CCCSEEEEEHHHHHHHHHHHHHHHCCCEEEECSSCHH
T ss_pred EEecCCCcCCcCHHHHHHHHHHH----HHHHHHHHHhc---C-CCCCEEEEcCCcchHHHHHHHHhcCCcEEEEccCccc
Confidence 77763211110111111111111 11233333331 1 3799999865322 3445778889999987665432
Q ss_pred HHHHHhhcccccccCccCCCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHH-HHHH--HhhhccccEEEEc
Q 012314 141 SVALVFRIPKLIDDGIIDSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDL-LERN--TRAMIAVNFHFCN 217 (466)
Q Consensus 141 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~vl~~ 217 (466)
....... . .+.. ...+. . ...+ .... ......+|.+++.
T Consensus 156 ~~~~~~~-----~-------------------~~~~---~~~~~----------~-~~~~~~~~~~~~~~~~~ad~vi~~ 197 (499)
T 2r60_A 156 QKMEKLN-----V-------------------NTSN---FKEMD----------E-RFKFHRRIIAERLTMSYADKIIVS 197 (499)
T ss_dssp HHHHTTC-----C-------------------CSTT---SHHHH----------H-HHCHHHHHHHHHHHHHHCSEEEES
T ss_pred ccchhhc-----c-------------------CCCC---cchhh----------h-hHHHHHHHHHHHHHHhcCCEEEEC
Confidence 1111000 0 0000 00000 0 0000 0000 1234678999999
Q ss_pred ChhhccHHHHh--h-------c-CCcceeccccCCCCCCCCCCCcccCC-----ccchhhhc-----cCCCCeEEEEEec
Q 012314 218 STYELESEAFT--T-------F-PELLPIGPLLASNRLGNTAGYFWCED-----SNCLKWLD-----QQQPSSVVYVSFG 277 (466)
Q Consensus 218 s~~~le~~~~~--~-------~-p~v~~VGpl~~~~~~~~~~~~~~~~~-----~~l~~~~~-----~~~~~~~v~vs~G 277 (466)
|...-+.-... + . .++..|..-...... .+.+ ..+.+-+. ..+ +..+++..|
T Consensus 198 S~~~~~~~~~~~~~g~~~~~~~~~ki~vi~ngvd~~~~-------~~~~~~~~~~~~r~~~~~~~~~~~~-~~~~i~~vG 269 (499)
T 2r60_A 198 TSQERFGQYSHDLYRGAVNVEDDDKFSVIPPGVNTRVF-------DGEYGDKIKAKITKYLERDLGSERM-ELPAIIASS 269 (499)
T ss_dssp SHHHHHHTTTSGGGTTTCCTTCGGGEEECCCCBCTTTS-------SSCCCHHHHHHHHHHHHHHSCGGGT-TSCEEEECS
T ss_pred CHHHHHHHHhhhcccccccccCCCCeEEECCCcChhhc-------CccchhhhHHHHHHHhcccccccCC-CCcEEEEee
Confidence 97754432111 1 1 133333311111110 0111 11222221 111 225667778
Q ss_pred cccccCHHHHHHHHHHHHhCCC----C-EEEEEcCCCCCC-CCCCC-------chhHHHH-----hcCCceeecccchh-
Q 012314 278 SFTILDQVQFQELALGLELCKR----P-FLWVVRPDITTD-ANDRY-------PEGFQER-----VAARGQMISWAPQL- 338 (466)
Q Consensus 278 s~~~~~~~~~~~~~~a~~~~~~----~-~i~~~~~~~~~~-~~~~~-------~~~~~~~-----~~~n~~~~~~~p~~- 338 (466)
... +......+++|+..+.. . .++++++...+. ....+ .+.+.+. ..+++.+.+++|+.
T Consensus 270 rl~--~~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~~V~~~G~v~~~~ 347 (499)
T 2r60_A 270 RLD--QKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSMFPLNSQQE 347 (499)
T ss_dssp CCC--GGGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTBCTTSCHHHHHHHHHHHHHHHHTTCBTTEEEEECCSHHH
T ss_pred cCc--cccCHHHHHHHHHHHHHhCCCceEEEEECCCCCcccccccccccchHHHHHHHHHHHhcCCCceEEECCCCCHHH
Confidence 652 33456667777765532 2 355565420000 00001 2233222 14678889999765
Q ss_pred --hhhcCC----Cccccee---c-cCCchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHH
Q 012314 339 --RVLNHP----SIACFLS---H-CGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIK 408 (466)
Q Consensus 339 --~ll~~~----~~~~~i~---h-gG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~ 408 (466)
.++..+ ++ +|. + |-..++.||+++|+|+|+.. -......+.+. ..|..+++ -+.++|+
T Consensus 348 ~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~----~~g~~e~v~~~-~~g~l~~~-----~d~~~la 415 (499)
T 2r60_A 348 LAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTR----NGGPAEILDGG-KYGVLVDP-----EDPEDIA 415 (499)
T ss_dssp HHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEES----SBHHHHHTGGG-TSSEEECT-----TCHHHHH
T ss_pred HHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEec----CCCHHHHhcCC-ceEEEeCC-----CCHHHHH
Confidence 477667 66 663 2 33468899999999999984 44556666652 57888853 4789999
Q ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHh
Q 012314 409 NKVDQVLGNQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVKTN 455 (466)
Q Consensus 409 ~~i~~ll~~~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~ 455 (466)
++|.++++|++.+++..+-+.+. +.+.-+.....+++.+.+.+.
T Consensus 416 ~~i~~ll~~~~~~~~~~~~a~~~---~~~~fs~~~~~~~~~~~y~~~ 459 (499)
T 2r60_A 416 RGLLKAFESEETWSAYQEKGKQR---VEERYTWQETARGYLEVIQEI 459 (499)
T ss_dssp HHHHHHHSCHHHHHHHHHHHHHH---HHHHSBHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCHHHHHHHHHHHHHH---HHHhCCHHHHHHHHHHHHHHH
Confidence 99999999987665443322222 222344444555555444444
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=3.4e-10 Score=109.32 Aligned_cols=349 Identities=11% Similarity=0.050 Sum_probs=182.4
Q ss_pred CEEEEEcCCC-ccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCccHHHHH
Q 012314 4 PRVLVMPAPA-QGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKLI 82 (466)
Q Consensus 4 ~~il~~~~~~-~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (466)
.++....+|. .|.-.-...++++|+++||+|++++...... .. ....++.+..++...... ....... .
T Consensus 16 ~~~~~~~~p~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~-~~-------~~~~~i~~~~~~~~~~~~-~~~~~~~-~ 85 (394)
T 2jjm_A 16 LKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGLPFR-LN-------KVYPNIYFHEVTVNQYSV-FQYPPYD-L 85 (394)
T ss_dssp CEEEEECCC--CHHHHHHHHHHHHHHHTTCEEEEECSSCC------------CCCTTEEEECCCCC-----CCSCCHH-H
T ss_pred eeeehhcCCCCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCc-cc-------ccCCceEEEecccccccc-ccccccc-H
Confidence 3566666664 4777788999999999999999999854321 11 112466666554211000 0000000 0
Q ss_pred HHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCch--hHHHHHHH-c--CCceEEeccchhHHHHHHhhcccccccCcc
Q 012314 83 EKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIG--WSMEIAKK-M--NVRGAVFWPSSAASVALVFRIPKLIDDGII 157 (466)
Q Consensus 83 ~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~--~~~~~A~~-l--giP~v~~~~~~~~~~~~~~~~p~~~~~~~~ 157 (466)
.....+.+++++ .+||+|++..... ....++.. + ++|+|........ . .
T Consensus 86 -----~~~~~l~~~l~~------~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~---~--~---------- 139 (394)
T 2jjm_A 86 -----ALASKMAEVAQR------ENLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDI---T--V---------- 139 (394)
T ss_dssp -----HHHHHHHHHHHH------HTCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHH---H--T----------
T ss_pred -----HHHHHHHHHHHH------cCCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCcc---c--c----------
Confidence 011234445555 6899999875333 23334443 3 5999887654321 0 0
Q ss_pred CCCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHHHhhc--CCcce
Q 012314 158 DSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTF--PELLP 235 (466)
Q Consensus 158 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~~~~~--p~v~~ 235 (466)
.+ .........+. ....+|.+++.|....+.-..-+. .++..
T Consensus 140 ---------------~~---------------~~~~~~~~~~~------~~~~ad~ii~~s~~~~~~~~~~~~~~~~~~v 183 (394)
T 2jjm_A 140 ---------------LG---------------SDPSLNNLIRF------GIEQSDVVTAVSHSLINETHELVKPNKDIQT 183 (394)
T ss_dssp ---------------TT---------------TCTTTHHHHHH------HHHHSSEEEESCHHHHHHHHHHTCCSSCEEE
T ss_pred ---------------cC---------------CCHHHHHHHHH------HHhhCCEEEECCHHHHHHHHHhhCCcccEEE
Confidence 00 00000011111 235788999998776554312222 25555
Q ss_pred eccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHh----CCCCEEEEEcCCCCC
Q 012314 236 IGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLEL----CKRPFLWVVRPDITT 311 (466)
Q Consensus 236 VGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~----~~~~~i~~~~~~~~~ 311 (466)
|..-....... ......+..-+.-. ++..+++..|+... ......+++++.. .+.++ +.++.+
T Consensus 184 i~ngv~~~~~~------~~~~~~~~~~~~~~-~~~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~l-~i~G~g--- 250 (394)
T 2jjm_A 184 VYNFIDERVYF------KRDMTQLKKEYGIS-ESEKILIHISNFRK--VKRVQDVVQAFAKIVTEVDAKL-LLVGDG--- 250 (394)
T ss_dssp CCCCCCTTTCC------CCCCHHHHHHTTCC----CEEEEECCCCG--GGTHHHHHHHHHHHHHSSCCEE-EEECCC---
T ss_pred ecCCccHHhcC------CcchHHHHHHcCCC-CCCeEEEEeecccc--ccCHHHHHHHHHHHHhhCCCEE-EEECCc---
Confidence 54322221110 00111122222111 23356666787532 2233444444432 24444 344433
Q ss_pred CCCCCCchhHHHHh-----cCCceeecccch-hhhhcCCCcccce----eccCCchhhhhhhcCcceeecccccchhhhH
Q 012314 312 DANDRYPEGFQERV-----AARGQMISWAPQ-LRVLNHPSIACFL----SHCGWNSTMEGVSNGIPFLCWPYFGDQFLNE 381 (466)
Q Consensus 312 ~~~~~~~~~~~~~~-----~~n~~~~~~~p~-~~ll~~~~~~~~i----~hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a 381 (466)
...+.+.+.. .+++.+.++... ..++..+++ +| .-|..+++.||+++|+|+|+.+.. ...
T Consensus 251 ----~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~PvI~~~~~----~~~ 320 (394)
T 2jjm_A 251 ----PEFCTILQLVKNLHIEDRVLFLGKQDNVAELLAMSDL--MLLLSEKESFGLVLLEAMACGVPCIGTRVG----GIP 320 (394)
T ss_dssp ----TTHHHHHHHHHTTTCGGGBCCCBSCSCTHHHHHTCSE--EEECCSCCSCCHHHHHHHHTTCCEEEECCT----TST
T ss_pred ----hHHHHHHHHHHHcCCCCeEEEeCchhhHHHHHHhCCE--EEeccccCCCchHHHHHHhcCCCEEEecCC----ChH
Confidence 1223333222 357777777554 468877777 77 455667899999999999998643 333
Q ss_pred HHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhc
Q 012314 382 RYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVKTNA 456 (466)
Q Consensus 382 ~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~~ 456 (466)
..+.+. +.|..+++ -+.++++++|.++++|++.+++..+-+.+.. .+.-+.....+++++.+.+..
T Consensus 321 e~v~~~-~~g~~~~~-----~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~---~~~~s~~~~~~~~~~~~~~~~ 386 (394)
T 2jjm_A 321 EVIQHG-DTGYLCEV-----GDTTGVADQAIQLLKDEELHRNMGERARESV---YEQFRSEKIVSQYETIYYDVL 386 (394)
T ss_dssp TTCCBT-TTEEEECT-----TCHHHHHHHHHHHHHCHHHHHHHHHHHHHHH---HHHSCHHHHHHHHHHHHHHTC
T ss_pred HHhhcC-CceEEeCC-----CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHH---HHhCCHHHHHHHHHHHHHHHH
Confidence 444442 67888853 3789999999999999876654433222222 124455666666776666654
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=1.5e-11 Score=119.34 Aligned_cols=340 Identities=11% Similarity=0.085 Sum_probs=179.9
Q ss_pred CCCEEEEEcCC---C-ccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCcc
Q 012314 2 SRPRVLVMPAP---A-QGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRND 77 (466)
Q Consensus 2 ~~~~il~~~~~---~-~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (466)
++|||++++.. . .|.-.....++++|.++||+|++++............ . ..+ +++.++.. ..
T Consensus 19 ~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~----~-~~~-~~~~~~~~-------~~ 85 (406)
T 2gek_A 19 SHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDYV----V-SGG-KAVPIPYN-------GS 85 (406)
T ss_dssp --CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCCCTTE----E-ECC-CCC--------------
T ss_pred CcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCccccCCccc----c-cCC-cEEecccc-------CC
Confidence 36799999842 2 5667789999999999999999999875432110000 0 000 11111100 00
Q ss_pred HHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCch--hHHHHHHHcCCceEEeccchhHHHHHHhhcccccccC
Q 012314 78 LGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIG--WSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDG 155 (466)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~ 155 (466)
...+ .+.......+.++++. .+||+|++..... .+..+++..++|+|.........
T Consensus 86 ~~~~--~~~~~~~~~l~~~l~~------~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~-------------- 143 (406)
T 2gek_A 86 VARL--RFGPATHRKVKKWIAE------GDFDVLHIHEPNAPSLSMLALQAAEGPIVATFHTSTTK-------------- 143 (406)
T ss_dssp -------CCHHHHHHHHHHHHH------HCCSEEEEECCCSSSHHHHHHHHEESSEEEEECCCCCS--------------
T ss_pred cccc--cccHHHHHHHHHHHHh------cCCCEEEECCccchHHHHHHHHhcCCCEEEEEcCcchh--------------
Confidence 0000 0000011234444444 6899999876443 35567777899999865321100
Q ss_pred ccCCCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHH-hhhccccEEEEcChhhccHHHHhhc-CCc
Q 012314 156 IIDSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNT-RAMIAVNFHFCNSTYELESEAFTTF-PEL 233 (466)
Q Consensus 156 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~vl~~s~~~le~~~~~~~-p~v 233 (466)
......+.... .....+|.+++.|....+.-...+. .++
T Consensus 144 ---------------------------------------~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~ 184 (406)
T 2gek_A 144 ---------------------------------------SLTLSVFQGILRPYHEKIIGRIAVSDLARRWQMEALGSDAV 184 (406)
T ss_dssp ---------------------------------------HHHHHHHHSTTHHHHTTCSEEEESSHHHHHHHHHHHSSCEE
T ss_pred ---------------------------------------hhhHHHHHHHHHHHHhhCCEEEECCHHHHHHHHHhcCCCcE
Confidence 00000010101 2346788888888765544322222 223
Q ss_pred ceeccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccc-cccCHHHHHHHHHHHHhC-----CCCEEEEEcC
Q 012314 234 LPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSF-TILDQVQFQELALGLELC-----KRPFLWVVRP 307 (466)
Q Consensus 234 ~~VGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~-~~~~~~~~~~~~~a~~~~-----~~~~i~~~~~ 307 (466)
.|..-...... .+.... .-+ .+ +..+++..|+. . +......+++++..+ +.+++ .++.
T Consensus 185 -vi~~~v~~~~~-------~~~~~~--~~~--~~-~~~~i~~~G~~~~--~~Kg~~~li~a~~~l~~~~~~~~l~-i~G~ 248 (406)
T 2gek_A 185 -EIPNGVDVASF-------ADAPLL--DGY--PR-EGRTVLFLGRYDE--PRKGMAVLLAALPKLVARFPDVEIL-IVGR 248 (406)
T ss_dssp -ECCCCBCHHHH-------HTCCCC--TTC--SC-SSCEEEEESCTTS--GGGCHHHHHHHHHHHHTTSTTCEEE-EESC
T ss_pred -EecCCCChhhc-------CCCchh--hhc--cC-CCeEEEEEeeeCc--cccCHHHHHHHHHHHHHHCCCeEEE-EEcC
Confidence 33321111000 000000 000 01 12566667765 2 223344444554332 34443 4443
Q ss_pred CCCCCCCCCCchhHHHHh---cCCceeecccchh---hhhcCCCccccee----ccCC-chhhhhhhcCcceeecccccc
Q 012314 308 DITTDANDRYPEGFQERV---AARGQMISWAPQL---RVLNHPSIACFLS----HCGW-NSTMEGVSNGIPFLCWPYFGD 376 (466)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~---~~n~~~~~~~p~~---~ll~~~~~~~~i~----hgG~-~s~~eal~~GvP~l~~P~~~D 376 (466)
. . . +.+.+.. .+++.+.+++|+. .++..+++ +|. +.|. .++.||+++|+|+|+.+
T Consensus 249 ~------~-~-~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~---- 314 (406)
T 2gek_A 249 G------D-E-DELREQAGDLAGHLRFLGQVDDATKASAMRSADV--YCAPHLGGESFGIVLVEAMAAGTAVVASD---- 314 (406)
T ss_dssp S------C-H-HHHHHHTGGGGGGEEECCSCCHHHHHHHHHHSSE--EEECCCSCCSSCHHHHHHHHHTCEEEECC----
T ss_pred C------c-H-HHHHHHHHhccCcEEEEecCCHHHHHHHHHHCCE--EEecCCCCCCCchHHHHHHHcCCCEEEec----
Confidence 3 1 1 3333322 4688888999975 68877887 663 3344 48999999999999984
Q ss_pred hhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHh
Q 012314 377 QFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVKTN 455 (466)
Q Consensus 377 Q~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~ 455 (466)
.......+.+. +.|..+++ -+.+++.++|.++++|++.+++..+ ..++.+. .-+.....+++.+.+...
T Consensus 315 ~~~~~e~i~~~-~~g~~~~~-----~d~~~l~~~i~~l~~~~~~~~~~~~---~~~~~~~-~~s~~~~~~~~~~~~~~~ 383 (406)
T 2gek_A 315 LDAFRRVLADG-DAGRLVPV-----DDADGMAAALIGILEDDQLRAGYVA---RASERVH-RYDWSVVSAQIMRVYETV 383 (406)
T ss_dssp CHHHHHHHTTT-TSSEECCT-----TCHHHHHHHHHHHHHCHHHHHHHHH---HHHHHGG-GGBHHHHHHHHHHHHHHH
T ss_pred CCcHHHHhcCC-CceEEeCC-----CCHHHHHHHHHHHHcCHHHHHHHHH---HHHHHHH-hCCHHHHHHHHHHHHHHH
Confidence 45666777663 67888743 4789999999999999876654433 3333222 344455555666555554
|
| >3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=6.4e-11 Score=116.00 Aligned_cols=387 Identities=12% Similarity=0.010 Sum_probs=191.5
Q ss_pred CCCEEEEEcCC-----CccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHH---------hh--hcCCCCCCCeEEEec
Q 012314 2 SRPRVLVMPAP-----AQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVE---------SL--QGKNYLGEQIHLVSI 65 (466)
Q Consensus 2 ~~~~il~~~~~-----~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~---------~~--~~~~~~~~~~~~~~~ 65 (466)
|+|||++++.. ..|--.-+..++++|+++||+|+++++......-.. .. ........++.++.+
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~ 80 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRI 80 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEEE
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEEEe
Confidence 57899999833 346666789999999999999999996532211000 00 000001246666666
Q ss_pred CCCCCCCCCC-c-cHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCch--hHHHHHHHcCCceEEeccchhHH
Q 012314 66 PDGMEPWEDR-N-DLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIG--WSMEIAKKMNVRGAVFWPSSAAS 141 (466)
Q Consensus 66 ~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~ 141 (466)
+...-..... . ....+...+. .....+..+++.+.... .+||+|.+-.... .+..+++..++|+|...+.....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~Dii~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~ 158 (439)
T 3fro_A 81 GGGLLDSEDVYGPGWDGLIRKAV-TFGRASVLLLNDLLREE-PLPDVVHFHDWHTVFAGALIKKYFKIPAVFTIHRLNKS 158 (439)
T ss_dssp ESGGGGCSSTTCSHHHHHHHHHH-HHHHHHHHHHHHHTTTS-CCCSEEEEESGGGHHHHHHHHHHHCCCEEEEESCCCCC
T ss_pred cchhccccccccCCcchhhhhhH-HHHHHHHHHHHHHhccC-CCCeEEEecchhhhhhHHHHhhccCCCEEEEecccccc
Confidence 5411111111 1 1111122221 11223444444441111 6899999876433 35566788899999876433210
Q ss_pred HHHHhhcccccccCccCCCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhh
Q 012314 142 VALVFRIPKLIDDGIIDSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYE 221 (466)
Q Consensus 142 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~ 221 (466)
..+... .....+ ..+. .... ....+. ....+|.+++.|...
T Consensus 159 -------------------~~~~~~---~~~~~~-----~~~~-----~~~~-~~~~~~------~~~~ad~ii~~S~~~ 199 (439)
T 3fro_A 159 -------------------KLPAFY---FHEAGL-----SELA-----PYPD-IDPEHT------GGYIADIVTTVSRGY 199 (439)
T ss_dssp -------------------CEEHHH---HHHTTC-----GGGC-----CSSE-ECHHHH------HHHHCSEEEESCHHH
T ss_pred -------------------cCchHH---hCcccc-----cccc-----ccce-eeHhhh------hhhhccEEEecCHHH
Confidence 000000 000000 0000 0000 011111 235788999998765
Q ss_pred ccHHHHh----hcCCcceeccccCCCCCC-CCCC-CcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHH-
Q 012314 222 LESEAFT----TFPELLPIGPLLASNRLG-NTAG-YFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGL- 294 (466)
Q Consensus 222 le~~~~~----~~p~v~~VGpl~~~~~~~-~~~~-~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~- 294 (466)
.+.. .. ...++..|..-.....-. .... ........+.+-+.- +++ .+++..|+... +......+++++
T Consensus 200 ~~~~-~~~~~~~~~~i~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~i~~~G~~~~-~~Kg~~~li~a~~ 275 (439)
T 3fro_A 200 LIDE-WGFFRNFEGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFGM-DEG-VTFMFIGRFDR-GQKGVDVLLKAIE 275 (439)
T ss_dssp HHHT-HHHHGGGTTSEEECCCCCCTTTSCGGGSCSCHHHHHHHHHHHHTC-CSC-EEEEEECCSSC-TTBCHHHHHHHHH
T ss_pred HHHH-hhhhhhcCCceeecCCCCCchhcCcccccchhhhhHHHHHHHcCC-CCC-cEEEEEccccc-ccccHHHHHHHHH
Confidence 5532 22 123444443222111100 0000 000001112222222 223 77777887640 122234444444
Q ss_pred --Hh----CCCCEEEEEcCCCCCCCCCCCchh---HHHHhcCCceeecccchh---hhhcCCCcccceec----cCCchh
Q 012314 295 --EL----CKRPFLWVVRPDITTDANDRYPEG---FQERVAARGQMISWAPQL---RVLNHPSIACFLSH----CGWNST 358 (466)
Q Consensus 295 --~~----~~~~~i~~~~~~~~~~~~~~~~~~---~~~~~~~n~~~~~~~p~~---~ll~~~~~~~~i~h----gG~~s~ 358 (466)
.. .+.++++ +|.+ . ....+. +.++.+.++.+.+|+|+. .++..+++ +|.- |-..++
T Consensus 276 ~l~~~~~~~~~~l~i-~G~g----~-~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~ 347 (439)
T 3fro_A 276 ILSSKKEFQEMRFII-IGKG----D-PELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVA 347 (439)
T ss_dssp HHHTSGGGGGEEEEE-ECCC----C-HHHHHHHHHHHHHCTTEEEECSCCCHHHHHHHHTTCSE--EEECBSCCSSCHHH
T ss_pred HHHhcccCCCeEEEE-EcCC----C-hhHHHHHHHHHhhcCCEEEEcCCCCHHHHHHHHHHCCE--EEeCCCCCCccHHH
Confidence 33 2334333 3333 0 101122 222234344456889875 47877777 6632 334688
Q ss_pred hhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHhc
Q 012314 359 MEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLG-NQDFKARALELKEKAMSSVRE 437 (466)
Q Consensus 359 ~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~-~~~~r~~a~~~~~~~~~~~~~ 437 (466)
.||+++|+|+|+.. .......+.+ |.|..+++ -+.++++++|.++++ |++.+++..+-+.+..+
T Consensus 348 ~EAma~G~Pvi~s~----~~~~~e~~~~--~~g~~~~~-----~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~---- 412 (439)
T 3fro_A 348 LEAMCLGAIPIASA----VGGLRDIITN--ETGILVKA-----GDPGELANAILKALELSRSDLSKFRENCKKRAM---- 412 (439)
T ss_dssp HHHHHTTCEEEEES----STHHHHHCCT--TTCEEECT-----TCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHH----
T ss_pred HHHHHCCCCeEEcC----CCCcceeEEc--CceEEeCC-----CCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHh----
Confidence 99999999999974 4455555543 78988853 479999999999998 76555544333333222
Q ss_pred CCCcHHHHHHHHHHHHHhc
Q 012314 438 GGSSYKTFQNFLQWVKTNA 456 (466)
Q Consensus 438 ~g~~~~~~~~~v~~~~~~~ 456 (466)
.-+.....+++++.+.+..
T Consensus 413 ~~s~~~~~~~~~~~~~~~~ 431 (439)
T 3fro_A 413 SFSWEKSAERYVKAYTGSI 431 (439)
T ss_dssp TSCHHHHHHHHHHHHHTCS
T ss_pred hCcHHHHHHHHHHHHHHHH
Confidence 4566777777777776653
|
| >3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A | Back alignment and structure |
|---|
Probab=99.36 E-value=2.2e-11 Score=116.79 Aligned_cols=326 Identities=13% Similarity=0.073 Sum_probs=165.2
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhC-C-CEEEEEeCCcchHHHHHhhhcCCCCCCCeEE-EecCCCCCCCCCCccH
Q 012314 2 SRPRVLVMPAPAQGHVIPLLEFSQCLAKH-G-FRVTFVNTDYNHKRVVESLQGKNYLGEQIHL-VSIPDGMEPWEDRNDL 78 (466)
Q Consensus 2 ~~~~il~~~~~~~GH~~p~l~la~~L~~r-G-h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 78 (466)
++|||++++ +..++......++++|+++ | |+|+++++....+........ .++.. ..++...+ ..+.
T Consensus 7 ~~mkIl~v~-~~~~~~~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~----~~~~ 76 (375)
T 3beo_A 7 ERLKVMTIF-GTRPEAIKMAPLVLELQKHPEKIESIVTVTAQHRQMLDQVLSI-----FGITPDFDLNIMKD----RQTL 76 (375)
T ss_dssp SCEEEEEEE-CSHHHHHHHHHHHHHHTTCTTTEEEEEEECCSSSHHHHHHHHH-----HTCCCSEECCCCCT----TCCH
T ss_pred cCceEEEEe-cCcHHHHHHHHHHHHHHhCCCCCCeEEEEcCCCHHHHHHHHHH-----cCCCCccccccCCC----cccH
Confidence 357999997 4467777888999999987 5 888877765443222211000 01211 11111101 1111
Q ss_pred HHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCC-ch--hHHHHHHHcCCceEEeccchhHHHHHHhhcccccccC
Q 012314 79 GKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGN-IG--WSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDG 155 (466)
Q Consensus 79 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~-~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~ 155 (466)
.... ......+.+++++ .+||+|++... .. .+..++..+|+|++.+.....
T Consensus 77 ~~~~----~~~~~~l~~~l~~------~~pDvv~~~~~~~~~~~~~~~~~~~~ip~v~~~~~~~---------------- 130 (375)
T 3beo_A 77 IDIT----TRGLEGLDKVMKE------AKPDIVLVHGDTTTTFIASLAAFYNQIPVGHVEAGLR---------------- 130 (375)
T ss_dssp HHHH----HHHHHHHHHHHHH------HCCSEEEEETTSHHHHHHHHHHHHTTCCEEEESCCCC----------------
T ss_pred HHHH----HHHHHHHHHHHHH------hCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEecccc----------------
Confidence 1111 1112234555555 78999998432 22 344677889999986432100
Q ss_pred ccCCCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHHHhhc--CCc
Q 012314 156 IIDSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTF--PEL 233 (466)
Q Consensus 156 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~~~~~--p~v 233 (466)
.. . .+. ........... ...+|.+++.|...-+.-..-.. .++
T Consensus 131 ---------------------~~---~---~~~--~~~~~~~~~~~------~~~~d~ii~~s~~~~~~~~~~g~~~~~i 175 (375)
T 3beo_A 131 ---------------------TW---D---KYS--PYPEEMNRQLT------GVMADLHFSPTAKSATNLQKENKDESRI 175 (375)
T ss_dssp ---------------------CS---C---TTS--STTHHHHHHHH------HHHCSEEEESSHHHHHHHHHTTCCGGGE
T ss_pred ---------------------cc---c---ccC--CChhHhhhhHH------hhhhheeeCCCHHHHHHHHHcCCCcccE
Confidence 00 0 000 00000011110 12377888887665443211111 245
Q ss_pred ceeccc-cCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhC---CCCEEEEEcCCC
Q 012314 234 LPIGPL-LASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELC---KRPFLWVVRPDI 309 (466)
Q Consensus 234 ~~VGpl-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~---~~~~i~~~~~~~ 309 (466)
..||.- ........ ......++..-+ ++++.++++.|...... ..+..+++|+..+ ..++.++++.+
T Consensus 176 ~vi~n~~~d~~~~~~----~~~~~~~~~~~~---~~~~~vl~~~gr~~~~~-K~~~~li~a~~~l~~~~~~~~~i~~~g- 246 (375)
T 3beo_A 176 FITGNTAIDALKTTV----KETYSHPVLEKL---GNNRLVLMTAHRRENLG-EPMRNMFRAIKRLVDKHEDVQVVYPVH- 246 (375)
T ss_dssp EECCCHHHHHHHHHC----CSSCCCHHHHTT---TTSEEEEEECCCGGGTT-HHHHHHHHHHHHHHHHCTTEEEEEECC-
T ss_pred EEECChhHhhhhhhh----hhhhhHHHHHhc---cCCCeEEEEecccccch-hHHHHHHHHHHHHHhhCCCeEEEEeCC-
Confidence 556532 11000000 000011111111 23557777777643221 3345566666432 11232333322
Q ss_pred CCCCCCCCchhHHHHhc--CCceeecccch---hhhhcCCCcccceeccCCchhhhhhhcCcceeecccccchhhhHHHH
Q 012314 310 TTDANDRYPEGFQERVA--ARGQMISWAPQ---LRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYI 384 (466)
Q Consensus 310 ~~~~~~~~~~~~~~~~~--~n~~~~~~~p~---~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv 384 (466)
....+.+.+.+... +++.+.+++++ ..++..+++ +|+..| +.+.||+++|+|+|+....... ...+
T Consensus 247 ---~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~---~e~v 317 (375)
T 3beo_A 247 ---MNPVVRETANDILGDYGRIHLIEPLDVIDFHNVAARSYL--MLTDSG-GVQEEAPSLGVPVLVLRDTTER---PEGI 317 (375)
T ss_dssp ---SCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTCSE--EEECCH-HHHHHHHHHTCCEEECSSCCSC---HHHH
T ss_pred ---CCHHHHHHHHHHhhccCCEEEeCCCCHHHHHHHHHhCcE--EEECCC-ChHHHHHhcCCCEEEecCCCCC---ceee
Confidence 00111222332223 68888777765 468877777 888764 4588999999999998543333 2233
Q ss_pred HHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHH
Q 012314 385 CDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARA 424 (466)
Q Consensus 385 ~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a 424 (466)
+ .|.|..++ . ++++|+++|.++++|++.+++.
T Consensus 318 -~-~g~g~~v~-----~-d~~~la~~i~~ll~~~~~~~~~ 349 (375)
T 3beo_A 318 -E-AGTLKLAG-----T-DEETIFSLADELLSDKEAHDKM 349 (375)
T ss_dssp -H-TTSEEECC-----S-CHHHHHHHHHHHHHCHHHHHHH
T ss_pred -c-CCceEEcC-----C-CHHHHHHHHHHHHhChHhHhhh
Confidence 4 38888773 2 7999999999999998766643
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* | Back alignment and structure |
|---|
Probab=99.29 E-value=1.7e-10 Score=112.29 Aligned_cols=112 Identities=13% Similarity=0.037 Sum_probs=74.9
Q ss_pred cCCceeecccc---h---hhhhcCCCcccceecc----CCchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEee
Q 012314 326 AARGQMISWAP---Q---LRVLNHPSIACFLSHC----GWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFD 395 (466)
Q Consensus 326 ~~n~~~~~~~p---~---~~ll~~~~~~~~i~hg----G~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~ 395 (466)
.+++.+.+|++ + ..++..+++ +|.-. ...++.||+++|+|+|+.+. ..+...+.+. +.|..+
T Consensus 292 ~~~V~~~G~~~~~~~~~~~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i~~~-~~g~l~- 363 (416)
T 2x6q_A 292 DYDVKVLTNLIGVHAREVNAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQIVDG-ETGFLV- 363 (416)
T ss_dssp CTTEEEEEGGGTCCHHHHHHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHCCBT-TTEEEE-
T ss_pred CCcEEEecccCCCCHHHHHHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhheecC-CCeEEE-
Confidence 36888888776 2 357877777 66533 45688999999999999753 4566666653 678877
Q ss_pred cCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Q 012314 396 RDEGGIITREEIKNKVDQVLGNQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVKT 454 (466)
Q Consensus 396 ~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~ 454 (466)
. +.++|+++|.++++|++.+++..+-+.+. +.+.-+.....+++.+.+.+
T Consensus 364 ----~--d~~~la~~i~~ll~~~~~~~~~~~~a~~~---~~~~fs~~~~~~~~~~~~~~ 413 (416)
T 2x6q_A 364 ----R--DANEAVEVVLYLLKHPEVSKEMGAKAKER---VRKNFIITKHMERYLDILNS 413 (416)
T ss_dssp ----S--SHHHHHHHHHHHHHCHHHHHHHHHHHHHH---HHHHTBHHHHHHHHHHHHHT
T ss_pred ----C--CHHHHHHHHHHHHhCHHHHHHHHHHHHHH---HHHHcCHHHHHHHHHHHHHH
Confidence 3 78999999999999987665443322222 11234545555566555543
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* | Back alignment and structure |
|---|
Probab=99.28 E-value=3.8e-09 Score=101.02 Aligned_cols=142 Identities=15% Similarity=0.223 Sum_probs=94.5
Q ss_pred CeEEEEEeccccccCHHHHHHHHHHHHhCCC----C-EEEEEcCCCCCCCCCCCchhHHH---Hh--cCCceeecccch-
Q 012314 269 SSVVYVSFGSFTILDQVQFQELALGLELCKR----P-FLWVVRPDITTDANDRYPEGFQE---RV--AARGQMISWAPQ- 337 (466)
Q Consensus 269 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~----~-~i~~~~~~~~~~~~~~~~~~~~~---~~--~~n~~~~~~~p~- 337 (466)
+..+++..|+.. +......+++++..+.. . -++.++.+ . .+.+.+ +. .+++.+.++...
T Consensus 195 ~~~~i~~~G~~~--~~K~~~~li~a~~~l~~~~~~~~~l~i~G~g----~----~~~~~~~~~~~~~~~~v~~~g~~~~~ 264 (374)
T 2iw1_A 195 QQNLLLQVGSDF--GRKGVDRSIEALASLPESLRHNTLLFVVGQD----K----PRKFEALAEKLGVRSNVHFFSGRNDV 264 (374)
T ss_dssp TCEEEEEECSCT--TTTTHHHHHHHHHTSCHHHHHTEEEEEESSS----C----CHHHHHHHHHHTCGGGEEEESCCSCH
T ss_pred CCeEEEEeccch--hhcCHHHHHHHHHHhHhccCCceEEEEEcCC----C----HHHHHHHHHHcCCCCcEEECCCcccH
Confidence 346777788653 33456667777766532 2 24444443 1 122222 22 367888887654
Q ss_pred hhhhcCCCccccee----ccCCchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHH
Q 012314 338 LRVLNHPSIACFLS----HCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQ 413 (466)
Q Consensus 338 ~~ll~~~~~~~~i~----hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ 413 (466)
..++..+++ +|. -|..+++.||+++|+|+|+... ..+...+++. +.|..+. +.-+.++++++|.+
T Consensus 265 ~~~~~~ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i~~~-~~g~~~~----~~~~~~~l~~~i~~ 333 (374)
T 2iw1_A 265 SELMAAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAV----CGYAHYIADA-NCGTVIA----EPFSQEQLNEVLRK 333 (374)
T ss_dssp HHHHHHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETT----STTTHHHHHH-TCEEEEC----SSCCHHHHHHHHHH
T ss_pred HHHHHhcCE--EEeccccCCcccHHHHHHHCCCCEEEecC----CCchhhhccC-CceEEeC----CCCCHHHHHHHHHH
Confidence 458877777 665 4566789999999999999854 4566777774 8899984 24589999999999
Q ss_pred HhcCHHHHHHHHHHHHHH
Q 012314 414 VLGNQDFKARALELKEKA 431 (466)
Q Consensus 414 ll~~~~~r~~a~~~~~~~ 431 (466)
+++|++.+++..+-+.+.
T Consensus 334 l~~~~~~~~~~~~~~~~~ 351 (374)
T 2iw1_A 334 ALTQSPLRMAWAENARHY 351 (374)
T ss_dssp HHHCHHHHHHHHHHHHHH
T ss_pred HHcChHHHHHHHHHHHHH
Confidence 999987666554444433
|
| >4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii} | Back alignment and structure |
|---|
Probab=99.16 E-value=2.8e-10 Score=108.90 Aligned_cols=318 Identities=15% Similarity=0.106 Sum_probs=167.8
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchH-HHHHhhhcCCCCCCCeEEEecCC-CCCCCCCCccHHHH
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHK-RVVESLQGKNYLGEQIHLVSIPD-GMEPWEDRNDLGKL 81 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 81 (466)
.|++++ ++++-.+.-+..|.++|.++ ++..++.+....+ .+.+... ..+.+. -|+ .+.. ...+....
T Consensus 10 ~~~~~v-~GtRpe~~k~~p~~~~l~~~-~~~~~~~tgqh~~~~~~~~~~------~~~~i~-~~~~~l~~--~~~~~~~~ 78 (385)
T 4hwg_A 10 LKVMTI-VGTRPELIKLCCVISEFDKH-TKHILVHTGQNYAYELNQVFF------DDMGIR-KPDYFLEV--AADNTAKS 78 (385)
T ss_dssp CEEEEE-ECSHHHHHHHHHHHHHHHHH-SEEEEEECSCHHHHHHTHHHH------C-CCCC-CCSEECCC--CCCCSHHH
T ss_pred hheeEE-EEcCHhHHHHHHHHHHHHhc-CCEEEEEeCCCCChhHHHHHH------hhCCCC-CCceecCC--CCCCHHHH
Confidence 455554 48888888899999999887 9988888875544 2322110 122210 011 0111 11122222
Q ss_pred HHHHHHhccHHHHHHHHHHhcCCCCCccEEEe--CCCchhHHHHHHHcCCceEEeccchhHHHHHHhhcccccccCccCC
Q 012314 82 IEKCLQVMPGKLEELIEEINSREDEKIDCFIA--DGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDS 159 (466)
Q Consensus 82 ~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~--D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~ 159 (466)
. ......+.+++++ .+||+|++ |....++..+|.++|||++.+....-
T Consensus 79 ~----~~~~~~l~~~l~~------~kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~eaglr-------------------- 128 (385)
T 4hwg_A 79 I----GLVIEKVDEVLEK------EKPDAVLFYGDTNSCLSAIAAKRRKIPIFHMEAGNR-------------------- 128 (385)
T ss_dssp H----HHHHHHHHHHHHH------HCCSEEEEESCSGGGGGHHHHHHTTCCEEEESCCCC--------------------
T ss_pred H----HHHHHHHHHHHHh------cCCcEEEEECCchHHHHHHHHHHhCCCEEEEeCCCc--------------------
Confidence 2 2233446677776 78999886 44444558899999999766431100
Q ss_pred CCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHHHhh--cCCcceec
Q 012314 160 HGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTT--FPELLPIG 237 (466)
Q Consensus 160 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~~~~--~p~v~~VG 237 (466)
... ..++ ......... ..++.+++.+...-+.-...- ..+++.+|
T Consensus 129 -----------------s~~-~~~p---------ee~nR~~~~------~~a~~~~~~te~~~~~l~~~G~~~~~I~vtG 175 (385)
T 4hwg_A 129 -----------------CFD-QRVP---------EEINRKIID------HISDVNITLTEHARRYLIAEGLPAELTFKSG 175 (385)
T ss_dssp -----------------CSC-TTST---------HHHHHHHHH------HHCSEEEESSHHHHHHHHHTTCCGGGEEECC
T ss_pred -----------------ccc-ccCc---------HHHHHHHHH------hhhceeecCCHHHHHHHHHcCCCcCcEEEEC
Confidence 000 0000 001111111 235566666654333221111 12577777
Q ss_pred cccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccC-HHHHHHHHHHHHhC----CCCEEEEEcCCCCCC
Q 012314 238 PLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILD-QVQFQELALGLELC----KRPFLWVVRPDITTD 312 (466)
Q Consensus 238 pl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~-~~~~~~~~~a~~~~----~~~~i~~~~~~~~~~ 312 (466)
-...+..... . ......++.+.+.-. +++.++++.|...... .+.+..+++++..+ +..+|+.....
T Consensus 176 np~~D~~~~~--~-~~~~~~~~~~~lgl~-~~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p~---- 247 (385)
T 4hwg_A 176 SHMPEVLDRF--M-PKILKSDILDKLSLT-PKQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHPR---- 247 (385)
T ss_dssp CSHHHHHHHH--H-HHHHHCCHHHHTTCC-TTSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECHH----
T ss_pred CchHHHHHHh--h-hhcchhHHHHHcCCC-cCCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECChH----
Confidence 3221110000 0 000111222333322 2458888887643222 24456666666433 56666655311
Q ss_pred CCCCCchhHHHH---h--cCCceeecccc---hhhhhcCCCcccceeccCCchhhhhhhcCcceeecccccchhhhHHHH
Q 012314 313 ANDRYPEGFQER---V--AARGQMISWAP---QLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYI 384 (466)
Q Consensus 313 ~~~~~~~~~~~~---~--~~n~~~~~~~p---~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv 384 (466)
+.+.+.+. . .+|+++.+.++ ...++.++++ +|+-.|. .+.||.+.|+|+|.++...+-+. .+
T Consensus 248 ----~~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adl--vvt~SGg-v~~EA~alG~Pvv~~~~~ter~e---~v 317 (385)
T 4hwg_A 248 ----TKKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFC--ILSDSGT-ITEEASILNLPALNIREAHERPE---GM 317 (385)
T ss_dssp ----HHHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCSE--EEECCTT-HHHHHHHTTCCEEECSSSCSCTH---HH
T ss_pred ----HHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcE--EEECCcc-HHHHHHHcCCCEEEcCCCccchh---hh
Confidence 11222211 1 35777765554 4568877777 9998775 46999999999999987554222 23
Q ss_pred HHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCHHHH
Q 012314 385 CDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFK 421 (466)
Q Consensus 385 ~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r 421 (466)
+. |.++.+. .+.++|.+++.++++|+..+
T Consensus 318 -~~-G~~~lv~------~d~~~i~~ai~~ll~d~~~~ 346 (385)
T 4hwg_A 318 -DA-GTLIMSG------FKAERVLQAVKTITEEHDNN 346 (385)
T ss_dssp -HH-TCCEECC------SSHHHHHHHHHHHHTTCBTT
T ss_pred -hc-CceEEcC------CCHHHHHHHHHHHHhChHHH
Confidence 43 8887763 27999999999999886543
|
| >2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A | Back alignment and structure |
|---|
Probab=98.94 E-value=2.4e-07 Score=91.80 Aligned_cols=163 Identities=13% Similarity=0.083 Sum_probs=95.6
Q ss_pred EEEEEeccccccCHHHHHHHHHHHHh---CCCCEEEEEcCCCCCCCCCCCchhHHH---HhcCCce-eecccch--hhhh
Q 012314 271 VVYVSFGSFTILDQVQFQELALGLEL---CKRPFLWVVRPDITTDANDRYPEGFQE---RVAARGQ-MISWAPQ--LRVL 341 (466)
Q Consensus 271 ~v~vs~Gs~~~~~~~~~~~~~~a~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~---~~~~n~~-~~~~~p~--~~ll 341 (466)
.+++..|... +......+++|+.. .+.+++++..+. ....+.+.+ +..+++. +.++.+. ..++
T Consensus 293 ~~i~~vGrl~--~~Kg~~~li~a~~~l~~~~~~l~ivG~g~------~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~ 364 (485)
T 2qzs_A 293 PLFAVVSRLT--SQKGLDLVLEALPGLLEQGGQLALLGAGD------PVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIM 364 (485)
T ss_dssp CEEEEEEEES--GGGCHHHHHHHHHHHHHTTCEEEEEEEEC------HHHHHHHHHHHHHSTTTEEEEESCCHHHHHHHH
T ss_pred eEEEEeccCc--cccCHHHHHHHHHHHhhCCcEEEEEeCCc------hHHHHHHHHHHHhCCCcEEEeCCCCHHHHHHHH
Confidence 5666677653 22334444455433 356655554322 011222222 2346775 5677333 2578
Q ss_pred cCCCccccee----ccCCchhhhhhhcCcceeecccccchhhhHHHHHHhh---------hceeEeecCCCCCcCHHHHH
Q 012314 342 NHPSIACFLS----HCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFW---------KVGLKFDRDEGGIITREEIK 408 (466)
Q Consensus 342 ~~~~~~~~i~----hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~---------G~G~~l~~~~~~~~~~~~l~ 408 (466)
..+++ +|. -|...+++||+++|+|+|+... ......+.+ - +.|..+++ -+.++|+
T Consensus 365 ~~adv--~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v~~-~~~~~~~~~~~~G~l~~~-----~d~~~la 432 (485)
T 2qzs_A 365 GGADV--ILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTVSD-CSLENLADGVASGFVFED-----SNAWSLL 432 (485)
T ss_dssp HHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCB-CCHHHHHTTCCCBEEECS-----SSHHHHH
T ss_pred HhCCE--EEECCccCCCcHHHHHHHHCCCCEEECCC----CCccceecc-CccccccccccceEEECC-----CCHHHHH
Confidence 77777 663 2335678999999999999843 445555543 1 47888843 4789999
Q ss_pred HHHHHHh---cCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhcccC
Q 012314 409 NKVDQVL---GNQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVKTNALAH 459 (466)
Q Consensus 409 ~~i~~ll---~~~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~~~~~ 459 (466)
++|.+++ +|++.+++..+ ..+. +.-+-....+++++.+......+
T Consensus 433 ~~i~~ll~~~~~~~~~~~~~~---~~~~---~~fs~~~~~~~~~~ly~~~~~~~ 480 (485)
T 2qzs_A 433 RAIRRAFVLWSRPSLWRFVQR---QAMA---MDFSWQVAAKSYRELYYRLKLEH 480 (485)
T ss_dssp HHHHHHHHHHTSHHHHHHHHH---HHHH---CCCCHHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHcCCHHHHHHHHH---HHHh---hcCCHHHHHHHHHHHHHHhhhhh
Confidence 9999999 68776654433 2222 24565677777777777664443
|
| >1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A | Back alignment and structure |
|---|
Probab=98.93 E-value=1.4e-07 Score=93.62 Aligned_cols=160 Identities=11% Similarity=0.027 Sum_probs=95.0
Q ss_pred EEEEEeccccccCHHHHHHHHHHHH---hCCCCEEEEEcCCCCCCCCCCCchhHH---HHhcCCce-eecccchh--hhh
Q 012314 271 VVYVSFGSFTILDQVQFQELALGLE---LCKRPFLWVVRPDITTDANDRYPEGFQ---ERVAARGQ-MISWAPQL--RVL 341 (466)
Q Consensus 271 ~v~vs~Gs~~~~~~~~~~~~~~a~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~---~~~~~n~~-~~~~~p~~--~ll 341 (466)
.+++..|... +......+++|+. +.+.+++++..+. ....+.+. ++.++++. +.++.... .++
T Consensus 292 ~~i~~vGrl~--~~Kg~~~li~a~~~l~~~~~~l~ivG~g~------~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~ 363 (485)
T 1rzu_A 292 PLFCVISRLT--WQKGIDLMAEAVDEIVSLGGRLVVLGAGD------VALEGALLAAASRHHGRVGVAIGYNEPLSHLMQ 363 (485)
T ss_dssp CEEEEESCBS--TTTTHHHHHTTHHHHHHTTCEEEEEECBC------HHHHHHHHHHHHHTTTTEEEEESCCHHHHHHHH
T ss_pred eEEEEEccCc--cccCHHHHHHHHHHHHhcCceEEEEeCCc------hHHHHHHHHHHHhCCCcEEEecCCCHHHHHHHH
Confidence 4777788763 2233444444443 2356655554322 11122222 23346787 56773332 578
Q ss_pred cCCCccccee----ccCCchhhhhhhcCcceeecccccchhhhHHHHHHhh---------hceeEeecCCCCCcCHHHHH
Q 012314 342 NHPSIACFLS----HCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFW---------KVGLKFDRDEGGIITREEIK 408 (466)
Q Consensus 342 ~~~~~~~~i~----hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~---------G~G~~l~~~~~~~~~~~~l~ 408 (466)
..+++ +|. -|...+++||+++|+|+|+... ......+.+ - +.|..+++ -+.++|+
T Consensus 364 ~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v~~-~~~~~~~~~~~~G~l~~~-----~d~~~la 431 (485)
T 1rzu_A 364 AGCDA--IIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTVID-ANHAALASKAATGVQFSP-----VTLDGLK 431 (485)
T ss_dssp HHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCB-CCHHHHHTTCCCBEEESS-----CSHHHHH
T ss_pred hcCCE--EEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhheecc-cccccccccCCcceEeCC-----CCHHHHH
Confidence 77777 663 2445689999999999999743 445555543 2 47888743 4789999
Q ss_pred HHHHHHh---cCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhc
Q 012314 409 NKVDQVL---GNQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVKTNA 456 (466)
Q Consensus 409 ~~i~~ll---~~~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~~ 456 (466)
++|.+++ +|++.+++..+ ..+. +.-+-....+++++.+....
T Consensus 432 ~~i~~ll~~~~~~~~~~~~~~---~~~~---~~fs~~~~~~~~~~~y~~~~ 476 (485)
T 1rzu_A 432 QAIRRTVRYYHDPKLWTQMQK---LGMK---SDVSWEKSAGLYAALYSQLI 476 (485)
T ss_dssp HHHHHHHHHHTCHHHHHHHHH---HHHT---CCCBHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCHHHHHHHHH---HHHH---HhCChHHHHHHHHHHHHHhh
Confidence 9999999 78776654433 2222 24555666666766666553
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* | Back alignment and structure |
|---|
Probab=98.90 E-value=1.8e-07 Score=97.11 Aligned_cols=166 Identities=10% Similarity=0.046 Sum_probs=93.1
Q ss_pred eEEEEEeccccccCHHHHHHHHHHHHhCC-----CCEEEEEcCCCCCCCCC----CCchhHHH---Hh--cCCceeec--
Q 012314 270 SVVYVSFGSFTILDQVQFQELALGLELCK-----RPFLWVVRPDITTDAND----RYPEGFQE---RV--AARGQMIS-- 333 (466)
Q Consensus 270 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~-----~~~i~~~~~~~~~~~~~----~~~~~~~~---~~--~~n~~~~~-- 333 (466)
..+++..|... +...+..+++|+..+. .+++++ |++.+..... ...+.+.+ +. .+++.+.+
T Consensus 572 ~~vIl~vGRl~--~~KGid~LIeA~~~L~~~~~~v~LvIv-G~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~flG~~ 648 (816)
T 3s28_A 572 KPILFTMARLD--RVKNLSGLVEWYGKNTRLRELANLVVV-GGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQ 648 (816)
T ss_dssp SCEEEEECCCC--TTTTHHHHHHHHHHCHHHHHHCEEEEE-CCCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEECCC
T ss_pred CeEEEEEccCc--ccCCHHHHHHHHHHHHhhCCCeEEEEE-eCCCcccccchhhHHHHHHHHHHHHHcCCCCcEEEccCc
Confidence 36677788753 3445666677765543 344444 4331100000 00111221 11 36777777
Q ss_pred --ccchhhhhc----CCCcccceec----cCCchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCCCCcC
Q 012314 334 --WAPQLRVLN----HPSIACFLSH----CGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIIT 403 (466)
Q Consensus 334 --~~p~~~ll~----~~~~~~~i~h----gG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~ 403 (466)
++|+.++.. .+++ +|.- |-..++.||+++|+|+|+. |-......+.+. ..|..+++ -+
T Consensus 649 ~~~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIas----d~GG~~EiV~dg-~~Gllv~p-----~D 716 (816)
T 3s28_A 649 MDRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVHG-KSGFHIDP-----YH 716 (816)
T ss_dssp CCHHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEE----SSBTHHHHCCBT-TTBEEECT-----TS
T ss_pred cccCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEe----CCCChHHHHccC-CcEEEeCC-----CC
Confidence 444454443 3455 6642 3346889999999999997 555566666663 67888854 47
Q ss_pred HHHHHHHHHHHh----cCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Q 012314 404 REEIKNKVDQVL----GNQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVK 453 (466)
Q Consensus 404 ~~~l~~~i~~ll----~~~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~ 453 (466)
+++++++|.+++ .|++.+++..+-+.+.. .+.-+-....+++++.+.
T Consensus 717 ~e~LA~aI~~lL~~Ll~d~~~~~~m~~~ar~~a---~~~fSwe~~a~~ll~lY~ 767 (816)
T 3s28_A 717 GDQAADTLADFFTKCKEDPSHWDEISKGGLQRI---EEKYTWQIYSQRLLTLTG 767 (816)
T ss_dssp HHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHH---HHSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHH---HHhCCHHHHHHHHHHHHH
Confidence 899999997776 78776664433333322 224455555555554433
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=98.84 E-value=3.9e-06 Score=84.87 Aligned_cols=117 Identities=9% Similarity=-0.043 Sum_probs=77.3
Q ss_pred CCceeecccchh---hhhcCCCccccee---ccCCchhhhhhhcCcceeecccccchhhh-HHHHHHhhhceeEeecCCC
Q 012314 327 ARGQMISWAPQL---RVLNHPSIACFLS---HCGWNSTMEGVSNGIPFLCWPYFGDQFLN-ERYICDFWKVGLKFDRDEG 399 (466)
Q Consensus 327 ~n~~~~~~~p~~---~ll~~~~~~~~i~---hgG~~s~~eal~~GvP~l~~P~~~DQ~~~-a~rv~~~~G~G~~l~~~~~ 399 (466)
+++.+.+++|+. .++..+++ ||. .|+.++++||+++|+|+|+.|-..=..+. +..+.+ .|+...+.
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~-~g~~e~v~---- 506 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLNHH-LGLDEMNV---- 506 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHH-HTCGGGBC----
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHH-CCChhhhc----
Confidence 678888999853 57877777 652 35667889999999999997643111112 344455 47777774
Q ss_pred CCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH--hcCCCcHHHHHHHHHHHHHh
Q 012314 400 GIITREEIKNKVDQVLGNQDFKARALELKEKAMSSV--REGGSSYKTFQNFLQWVKTN 455 (466)
Q Consensus 400 ~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~~~~--~~~g~~~~~~~~~v~~~~~~ 455 (466)
+ +.+++.+++.++++|++.+++..+ ..++.+ .+..+.....+++.+.+...
T Consensus 507 ~--~~~~la~~i~~l~~~~~~~~~~~~---~~~~~~~~~~~f~~~~~~~~~~~~y~~~ 559 (568)
T 2vsy_A 507 A--DDAAFVAKAVALASDPAALTALHA---RVDVLRRASGVFHMDGFADDFGALLQAL 559 (568)
T ss_dssp S--SHHHHHHHHHHHHHCHHHHHHHHH---HHHHHHHHSSTTCHHHHHHHHHHHHHHH
T ss_pred C--CHHHHHHHHHHHhcCHHHHHHHHH---HHHHhhhcCCCCCHHHHHHHHHHHHHHH
Confidence 2 899999999999999887765443 333332 23455555556665555554
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* | Back alignment and structure |
|---|
Probab=98.84 E-value=4.8e-07 Score=87.66 Aligned_cols=165 Identities=7% Similarity=0.025 Sum_probs=95.9
Q ss_pred eEEEEEeccccccCHHHHHHHHHHHHh-----CCCCEEEEEcCCCCCCCCCCCchhHHH---Hh--cCC-------ceee
Q 012314 270 SVVYVSFGSFTILDQVQFQELALGLEL-----CKRPFLWVVRPDITTDANDRYPEGFQE---RV--AAR-------GQMI 332 (466)
Q Consensus 270 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~-----~~~~~i~~~~~~~~~~~~~~~~~~~~~---~~--~~n-------~~~~ 332 (466)
..+++..|... +......+++|+.. .+.+++++..+.... ...+.+.+.+ +. .++ +.+.
T Consensus 184 ~~~il~vGr~~--~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~--~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~ 259 (413)
T 3oy2_A 184 DVLFLNMNRNT--ARKRLDIYVLAAARFISKYPDAKVRFLCNSHHES--KFDLHSIALRELVASGVDNVFTHLNKIMINR 259 (413)
T ss_dssp SEEEECCSCSS--GGGTHHHHHHHHHHHHHHCTTCCEEEEEECCTTC--SCCHHHHHHHHHHHHTCSCHHHHHTTEEEEC
T ss_pred ceEEEEcCCCc--hhcCcHHHHHHHHHHHHhCCCcEEEEEeCCcccc--hhhHHHHHHHHHHHcCcccccccccceeecc
Confidence 47777788752 22334444555433 356766665544110 0011122222 12 222 4555
Q ss_pred cccchh---hhhcCCCccccee----ccCCchhhhhhhcCcceeecccccchhhhHHHHHHhhhc---------------
Q 012314 333 SWAPQL---RVLNHPSIACFLS----HCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKV--------------- 390 (466)
Q Consensus 333 ~~~p~~---~ll~~~~~~~~i~----hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~--------------- 390 (466)
+|+|+. .++..+++ +|. -|...++.||+++|+|+|+.. -......+.+ |.
T Consensus 260 g~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~----~~g~~e~v~~--~~~~~i~~~~~~~~~~~ 331 (413)
T 3oy2_A 260 TVLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISA----VGGADDYFSG--DCVYKIKPSAWISVDDR 331 (413)
T ss_dssp SCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEEC----CHHHHHHSCT--TTSEEECCCEEEECTTT
T ss_pred CcCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcC----CCChHHHHcc--Ccccccccccccccccc
Confidence 999854 47877777 663 233458899999999999974 4444554443 33
Q ss_pred -ee--EeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHh
Q 012314 391 -GL--KFDRDEGGIITREEIKNKVDQVLGNQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVKTN 455 (466)
Q Consensus 391 -G~--~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~ 455 (466)
|. .+.+ -+.++|+++| ++++|++.+++..+-+.+. +.+.-+-....+++.+.+.+.
T Consensus 332 ~G~~gl~~~-----~d~~~la~~i-~l~~~~~~~~~~~~~a~~~---~~~~fs~~~~~~~~~~~~~~~ 390 (413)
T 3oy2_A 332 DGIGGIEGI-----IDVDDLVEAF-TFFKDEKNRKEYGKRVQDF---VKTKPTWDDISSDIIDFFNSL 390 (413)
T ss_dssp CSSCCEEEE-----CCHHHHHHHH-HHTTSHHHHHHHHHHHHHH---HTTSCCHHHHHHHHHHHHHHH
T ss_pred cCcceeeCC-----CCHHHHHHHH-HHhcCHHHHHHHHHHHHHH---HHHhCCHHHHHHHHHHHHHHH
Confidence 55 5543 3899999999 9999987766544333333 223556666666666666665
|
| >2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A* | Back alignment and structure |
|---|
Probab=98.82 E-value=7.2e-07 Score=85.13 Aligned_cols=83 Identities=14% Similarity=0.170 Sum_probs=57.8
Q ss_pred ceeecccch-hhhhcCCCccccee-----ccCCchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCCCCc
Q 012314 329 GQMISWAPQ-LRVLNHPSIACFLS-----HCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGII 402 (466)
Q Consensus 329 ~~~~~~~p~-~~ll~~~~~~~~i~-----hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~ 402 (466)
+.+.++... ..++..+++ ++. -+|..++.||+++|+|+|+-|...+.......+.+. |.++...
T Consensus 262 v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~-G~l~~~~------- 331 (374)
T 2xci_A 262 VILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKE-GAGFEVK------- 331 (374)
T ss_dssp EEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHT-TCEEECC-------
T ss_pred EEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHC-CCEEEeC-------
Confidence 444454443 358866665 543 124478999999999999877766666666655553 7766652
Q ss_pred CHHHHHHHHHHHhcCHHHHH
Q 012314 403 TREEIKNKVDQVLGNQDFKA 422 (466)
Q Consensus 403 ~~~~l~~~i~~ll~~~~~r~ 422 (466)
++++|+++|.++++| +.++
T Consensus 332 d~~~La~ai~~ll~d-~~r~ 350 (374)
T 2xci_A 332 NETELVTKLTELLSV-KKEI 350 (374)
T ss_dssp SHHHHHHHHHHHHHS-CCCC
T ss_pred CHHHHHHHHHHHHhH-HHHH
Confidence 689999999999987 5443
|
| >2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* | Back alignment and structure |
|---|
Probab=98.58 E-value=6.9e-06 Score=79.25 Aligned_cols=76 Identities=8% Similarity=0.006 Sum_probs=57.8
Q ss_pred cCCceeecccchh---hhhcCCCccccee---ccC-Cchhhhhh-------hcCcceeecccccchhhhHHHHHHhhhce
Q 012314 326 AARGQMISWAPQL---RVLNHPSIACFLS---HCG-WNSTMEGV-------SNGIPFLCWPYFGDQFLNERYICDFWKVG 391 (466)
Q Consensus 326 ~~n~~~~~~~p~~---~ll~~~~~~~~i~---hgG-~~s~~eal-------~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G 391 (466)
.+|+.+.+++|+. .++..+++ +|. +.| .+++.||+ ++|+|+|+... +.+. ..|
T Consensus 264 ~~~V~f~G~~~~~~l~~~~~~adv--~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~~-~~G 330 (406)
T 2hy7_A 264 GDNVIVYGEMKHAQTIGYIKHARF--GIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVGP-YKS 330 (406)
T ss_dssp CTTEEEECCCCHHHHHHHHHTCSE--EECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTCS-CSS
T ss_pred CCCEEEcCCCCHHHHHHHHHhcCE--EEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------cccC-cce
Confidence 5788899999865 47877777 553 334 45779999 99999999854 4542 568
Q ss_pred eE-eecCCCCCcCHHHHHHHHHHHhcCHH
Q 012314 392 LK-FDRDEGGIITREEIKNKVDQVLGNQD 419 (466)
Q Consensus 392 ~~-l~~~~~~~~~~~~l~~~i~~ll~~~~ 419 (466)
.. +.+ -+.++|+++|.++++|+.
T Consensus 331 ~l~v~~-----~d~~~la~ai~~ll~~~~ 354 (406)
T 2hy7_A 331 RFGYTP-----GNADSVIAAITQALEAPR 354 (406)
T ss_dssp EEEECT-----TCHHHHHHHHHHHHHCCC
T ss_pred EEEeCC-----CCHHHHHHHHHHHHhCcc
Confidence 77 753 378999999999998775
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=98.57 E-value=1.4e-07 Score=79.91 Aligned_cols=139 Identities=11% Similarity=0.078 Sum_probs=91.3
Q ss_pred EEEEEeccccccCHHHHHHHHHHHHhC-CCCEEEEEcCCCCCCCCCCCchhHH---HHhcCCceeecccch---hhhhcC
Q 012314 271 VVYVSFGSFTILDQVQFQELALGLELC-KRPFLWVVRPDITTDANDRYPEGFQ---ERVAARGQMISWAPQ---LRVLNH 343 (466)
Q Consensus 271 ~v~vs~Gs~~~~~~~~~~~~~~a~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~---~~~~~n~~~~~~~p~---~~ll~~ 343 (466)
.+++..|+.. +...+..+++++..+ +.+++++..+. ..+.+.+... ....+|+.+.+|+|+ ..++..
T Consensus 24 ~~i~~~G~~~--~~Kg~~~li~a~~~l~~~~l~i~G~~~----~~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~ 97 (177)
T 2f9f_A 24 DFWLSVNRIY--PEKRIELQLEVFKKLQDEKLYIVGWFS----KGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSR 97 (177)
T ss_dssp SCEEEECCSS--GGGTHHHHHHHHHHCTTSCEEEEBCCC----TTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHH
T ss_pred CEEEEEeccc--cccCHHHHHHHHHhCCCcEEEEEecCc----cHHHHHHHHHhhhcccCCcEEEeCCCCHHHHHHHHHh
Confidence 4555677653 344567778888776 45655554333 1112222111 123468999999997 468877
Q ss_pred CCccccee---ccCC-chhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCHH
Q 012314 344 PSIACFLS---HCGW-NSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQD 419 (466)
Q Consensus 344 ~~~~~~i~---hgG~-~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~ 419 (466)
+++ +|. +.|. .++.||+++|+|+|+.. ...+...+.+. +.|..+ . -+.++++++|.++++|++
T Consensus 98 adi--~v~ps~~e~~~~~~~Eama~G~PvI~~~----~~~~~e~i~~~-~~g~~~-~-----~d~~~l~~~i~~l~~~~~ 164 (177)
T 2f9f_A 98 CKG--LLCTAKDEDFGLTPIEAMASGKPVIAVN----EGGFKETVINE-KTGYLV-N-----ADVNEIIDAMKKVSKNPD 164 (177)
T ss_dssp CSE--EEECCSSCCSCHHHHHHHHTTCCEEEES----SHHHHHHCCBT-TTEEEE-C-----SCHHHHHHHHHHHHHCTT
T ss_pred CCE--EEeCCCcCCCChHHHHHHHcCCcEEEeC----CCCHHHHhcCC-CccEEe-C-----CCHHHHHHHHHHHHhCHH
Confidence 777 665 3444 48999999999999974 45666666653 678877 4 268999999999998876
Q ss_pred H-HHHHHHHH
Q 012314 420 F-KARALELK 428 (466)
Q Consensus 420 ~-r~~a~~~~ 428 (466)
. ++++++.+
T Consensus 165 ~~~~~~~~~a 174 (177)
T 2f9f_A 165 KFKKDCFRRA 174 (177)
T ss_dssp TTHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 5 55555443
|
| >3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* | Back alignment and structure |
|---|
Probab=98.16 E-value=0.00021 Score=71.31 Aligned_cols=177 Identities=9% Similarity=0.068 Sum_probs=93.3
Q ss_pred eEEEEEeccccccCHHHHHHHHHHHH---hCCCCEEEEEcCCCCCCCCCCCchhHHHHhcCCceeecccchh---hhhcC
Q 012314 270 SVVYVSFGSFTILDQVQFQELALGLE---LCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQL---RVLNH 343 (466)
Q Consensus 270 ~~v~vs~Gs~~~~~~~~~~~~~~a~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~---~ll~~ 343 (466)
.++++..|... +...+..+++|+. +.+.++++...++. .....-.......+.++.+....+.. .++..
T Consensus 327 ~p~i~~vgRl~--~~Kg~~~li~a~~~l~~~~~~l~l~G~G~~---~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 401 (536)
T 3vue_A 327 IPLIAFIGRLE--EQKGPDVMAAAIPELMQEDVQIVLLGTGKK---KFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMAG 401 (536)
T ss_dssp SCEEEEECCBS--GGGCHHHHHHHHHHHTTSSCEEEEECCBCH---HHHHHHHHHHHHSTTTEEEECSCCHHHHHHHHHH
T ss_pred CcEEEEEeecc--ccCChHHHHHHHHHhHhhCCeEEEEeccCc---hHHHHHHHHHhhcCCceEEEEeccHHHHHHHHHh
Confidence 35666677653 3344555666654 33556655543330 00000111222345677777666653 46766
Q ss_pred CCcccceec---cCC-chhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCC-----CCCcCHHHHHHHHHHH
Q 012314 344 PSIACFLSH---CGW-NSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDE-----GGIITREEIKNKVDQV 414 (466)
Q Consensus 344 ~~~~~~i~h---gG~-~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~-----~~~~~~~~l~~~i~~l 414 (466)
+++ ||.- =|. .+++||+++|+|+|+.. .......|.+. .-|....... -+..+++.|+++|+++
T Consensus 402 aD~--~v~PS~~E~fgl~~lEAma~G~PvI~s~----~gG~~e~V~dg-~~G~~~~~~~~~g~l~~~~d~~~la~ai~ra 474 (536)
T 3vue_A 402 ADV--LAVPSRFEPCGLIQLQGMRYGTPCACAS----TGGLVDTVIEG-KTGFHMGRLSVDCKVVEPSDVKKVAATLKRA 474 (536)
T ss_dssp CSE--EEECCSCCSSCSHHHHHHHTTCCEEECS----CTHHHHHCCBT-TTEEECCCCCSCTTCCCHHHHHHHHHHHHHH
T ss_pred hhe--eecccccCCCCHHHHHHHHcCCCEEEcC----CCCchheeeCC-CCccccccCCCceeEECCCCHHHHHHHHHHH
Confidence 776 6642 233 47899999999999874 44555555552 4455332100 0223578999999988
Q ss_pred hc---CHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhcccCCCCCCC
Q 012314 415 LG---NQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVKTNALAHNSPVTG 465 (466)
Q Consensus 415 l~---~~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~~~~~~~~~~~ 465 (466)
+. ++.++ +..+++++..-+=.+..++..+.+.++..+...|..+
T Consensus 475 l~~~~~~~~~-------~~~~~am~~~fSW~~~A~~y~~ly~~L~~~~~~p~~~ 521 (536)
T 3vue_A 475 IKVVGTPAYE-------EMVRNCMNQDLSWKGPAKNWENVLLGLGVAGSAPGIE 521 (536)
T ss_dssp HHHTTSHHHH-------HHHHHHHHSCCSSHHHHHHHHHHHHTTCC--------
T ss_pred HHhcCcHHHH-------HHHHHHHHhcCCHHHHHHHHHHHHHHhhhccCCCCCc
Confidence 74 33332 2223333334444666677777777776555555443
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* | Back alignment and structure |
|---|
Probab=98.12 E-value=3.3e-05 Score=74.50 Aligned_cols=84 Identities=11% Similarity=0.014 Sum_probs=56.6
Q ss_pred CCceeecccchh---hhhcCCCccccee--c-cCC-chhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCC
Q 012314 327 ARGQMISWAPQL---RVLNHPSIACFLS--H-CGW-NSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEG 399 (466)
Q Consensus 327 ~n~~~~~~~p~~---~ll~~~~~~~~i~--h-gG~-~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~ 399 (466)
.++.+.+++|+. .+++.+++ ||. . =|. .+++||+++|+|+|+. ..+ ....+.+. ..|..+++
T Consensus 295 ~~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~~-~~g----~~e~v~~~-~~G~lv~~--- 363 (413)
T 2x0d_A 295 IHLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVITN-KYE----NKDLSNWH-SNIVSLEQ--- 363 (413)
T ss_dssp EEEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEEE-CBT----TBCGGGTB-TTEEEESS---
T ss_pred CcEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEEe-CCC----cchhhhcC-CCEEEeCC---
Confidence 577788999865 47777777 664 2 233 5679999999999983 222 12334442 46887753
Q ss_pred CCcCHHHHHHHHHHHhcCHHHHHH
Q 012314 400 GIITREEIKNKVDQVLGNQDFKAR 423 (466)
Q Consensus 400 ~~~~~~~l~~~i~~ll~~~~~r~~ 423 (466)
-++++|+++|.++++|++.+++
T Consensus 364 --~d~~~la~ai~~ll~~~~~~~~ 385 (413)
T 2x0d_A 364 --LNPENIAETLVELCMSFNNRDV 385 (413)
T ss_dssp --CSHHHHHHHHHHHHHHTC----
T ss_pred --CCHHHHHHHHHHHHcCHHHHHH
Confidence 4799999999999988776665
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=97.90 E-value=5.4e-05 Score=62.78 Aligned_cols=134 Identities=13% Similarity=0.230 Sum_probs=81.1
Q ss_pred eEEEEEeccccccCHHHHHHHHHHHHhCC--CCE-EEEEcCCCCCCCCCCCchhHHH---HhcCCceeecccchh---hh
Q 012314 270 SVVYVSFGSFTILDQVQFQELALGLELCK--RPF-LWVVRPDITTDANDRYPEGFQE---RVAARGQMISWAPQL---RV 340 (466)
Q Consensus 270 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~--~~~-i~~~~~~~~~~~~~~~~~~~~~---~~~~n~~~~~~~p~~---~l 340 (466)
+++++..|+.. +......+++++..+. .++ ++.++.+ ...+.+.+ +..-++.+ +|+|+. .+
T Consensus 2 ~~~i~~~G~~~--~~Kg~~~li~a~~~l~~~~~~~l~i~G~g-------~~~~~~~~~~~~~~~~v~~-g~~~~~~~~~~ 71 (166)
T 3qhp_A 2 PFKIAMVGRYS--NEKNQSVLIKAVALSKYKQDIVLLLKGKG-------PDEKKIKLLAQKLGVKAEF-GFVNSNELLEI 71 (166)
T ss_dssp CEEEEEESCCS--TTTTHHHHHHHHHTCTTGGGEEEEEECCS-------TTHHHHHHHHHHHTCEEEC-CCCCHHHHHHH
T ss_pred ceEEEEEeccc--hhcCHHHHHHHHHHhccCCCeEEEEEeCC-------ccHHHHHHHHHHcCCeEEE-eecCHHHHHHH
Confidence 47778888763 3445677777777653 233 3333433 11233222 33447777 999864 47
Q ss_pred hcCCCccccee----ccCCchhhhhhhcCc-ceeecccccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHh
Q 012314 341 LNHPSIACFLS----HCGWNSTMEGVSNGI-PFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVL 415 (466)
Q Consensus 341 l~~~~~~~~i~----hgG~~s~~eal~~Gv-P~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll 415 (466)
+..+++ +|. -|...++.||+++|+ |+|+....+ .....+.+. +. .+ ..-+.+++.++|.+++
T Consensus 72 ~~~adv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~---~~~~~~~~~-~~--~~-----~~~~~~~l~~~i~~l~ 138 (166)
T 3qhp_A 72 LKTCTL--YVHAANVESEAIACLEAISVGIVPVIANSPLS---ATRQFALDE-RS--LF-----EPNNAKDLSAKIDWWL 138 (166)
T ss_dssp HTTCSE--EEECCCSCCCCHHHHHHHHTTCCEEEECCTTC---GGGGGCSSG-GG--EE-----CTTCHHHHHHHHHHHH
T ss_pred HHhCCE--EEECCcccCccHHHHHHHhcCCCcEEeeCCCC---chhhhccCC-ce--EE-----cCCCHHHHHHHHHHHH
Confidence 877777 665 233468899999996 999943221 122222221 32 34 2347999999999999
Q ss_pred cCHHHHHHHHH
Q 012314 416 GNQDFKARALE 426 (466)
Q Consensus 416 ~~~~~r~~a~~ 426 (466)
+|++.+++..+
T Consensus 139 ~~~~~~~~~~~ 149 (166)
T 3qhp_A 139 ENKLERERMQN 149 (166)
T ss_dssp HCHHHHHHHHH
T ss_pred hCHHHHHHHHH
Confidence 99876554433
|
| >3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A | Back alignment and structure |
|---|
Probab=97.87 E-value=0.0004 Score=68.98 Aligned_cols=141 Identities=11% Similarity=0.073 Sum_probs=92.7
Q ss_pred CeEEEEEeccccccCHHHHHHHHHHHHhCCCCEEEEE--cCCCCCCCCCCCchhHHH-----HhcCCceeecccchhh--
Q 012314 269 SSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVV--RPDITTDANDRYPEGFQE-----RVAARGQMISWAPQLR-- 339 (466)
Q Consensus 269 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~--~~~~~~~~~~~~~~~~~~-----~~~~n~~~~~~~p~~~-- 339 (466)
+.++|.+|++.....++.++.+.+.+++.+..++|.. +.. ......+.+ -..+.+.+.+.+|+.+
T Consensus 440 G~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~------~g~~~~~~~~~~~~GI~~Rv~F~g~~p~~e~l 513 (631)
T 3q3e_A 440 EVVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQS------NGITHPYVERFIKSYLGDSATAHPHSPYHQYL 513 (631)
T ss_dssp SEEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSC------CGGGHHHHHHHHHHHHGGGEEEECCCCHHHHH
T ss_pred CeEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCC------chhhHHHHHHHHHcCCCccEEEcCCCCHHHHH
Confidence 4688999988777788889988888888887777643 322 112222221 1235777778888665
Q ss_pred -hhcCCCccccee---ccCCchhhhhhhcCcceeeccccc-chhhhHHHHHHhhhceeE-eecCCCCCcCHHHHHHHHHH
Q 012314 340 -VLNHPSIACFLS---HCGWNSTMEGVSNGIPFLCWPYFG-DQFLNERYICDFWKVGLK-FDRDEGGIITREEIKNKVDQ 413 (466)
Q Consensus 340 -ll~~~~~~~~i~---hgG~~s~~eal~~GvP~l~~P~~~-DQ~~~a~rv~~~~G~G~~-l~~~~~~~~~~~~l~~~i~~ 413 (466)
.+..+++ ++. .+|.+|++|||++|||+|+.+-.. -...-+..+.. +|+..+ +. -+.++..+...+
T Consensus 514 a~y~~aDI--fLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~-~GLpE~LIA------~d~eeYv~~Av~ 584 (631)
T 3q3e_A 514 RILHNCDM--MVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKR-LGLPEWLIA------NTVDEYVERAVR 584 (631)
T ss_dssp HHHHTCSE--EECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHH-TTCCGGGEE------SSHHHHHHHHHH
T ss_pred HHHhcCcE--EEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHh-cCCCcceec------CCHHHHHHHHHH
Confidence 4466666 543 477899999999999999986421 11111222333 476653 43 267888888889
Q ss_pred HhcCHHHHHHH
Q 012314 414 VLGNQDFKARA 424 (466)
Q Consensus 414 ll~~~~~r~~a 424 (466)
+.+|++.+++.
T Consensus 585 La~D~~~l~~L 595 (631)
T 3q3e_A 585 LAENHQERLEL 595 (631)
T ss_dssp HHHCHHHHHHH
T ss_pred HhCCHHHHHHH
Confidence 99998776644
|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=97.81 E-value=0.00027 Score=60.43 Aligned_cols=85 Identities=8% Similarity=-0.027 Sum_probs=63.3
Q ss_pred Ccee-ecccchh---hhhcCCCcccceecc---C-CchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCC
Q 012314 328 RGQM-ISWAPQL---RVLNHPSIACFLSHC---G-WNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEG 399 (466)
Q Consensus 328 n~~~-~~~~p~~---~ll~~~~~~~~i~hg---G-~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~ 399 (466)
++.+ .+++++. .++..+++ +|.-. | ..++.||+++|+|+|+.. -......+ +. +.|..+++
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~----~~~~~e~~-~~-~~g~~~~~--- 164 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASA----VGGLRDII-TN-ETGILVKA--- 164 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEES----CHHHHHHC-CT-TTCEEECT---
T ss_pred CEEEEeccCCHHHHHHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeC----CCChHHHc-CC-CceEEecC---
Confidence 8889 8999854 58877777 66422 3 467899999999999884 34555555 53 78888853
Q ss_pred CCcCHHHHHHHHHHHhc-CHHHHHHHH
Q 012314 400 GIITREEIKNKVDQVLG-NQDFKARAL 425 (466)
Q Consensus 400 ~~~~~~~l~~~i~~ll~-~~~~r~~a~ 425 (466)
-+.+++.++|.++++ |++.+++..
T Consensus 165 --~~~~~l~~~i~~l~~~~~~~~~~~~ 189 (200)
T 2bfw_A 165 --GDPGELANAILKALELSRSDLSKFR 189 (200)
T ss_dssp --TCHHHHHHHHHHHHHCCHHHHHHHH
T ss_pred --CCHHHHHHHHHHHHhcCHHHHHHHH
Confidence 479999999999999 887655443
|
| >3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula} | Back alignment and structure |
|---|
Probab=97.69 E-value=0.00036 Score=65.53 Aligned_cols=106 Identities=20% Similarity=0.169 Sum_probs=74.0
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhC--CCEEEEEeCCcchHHHHHhhhcCCCCCCCeE-EEecCCCCCCCCCCcc
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKH--GFRVTFVNTDYNHKRVVESLQGKNYLGEQIH-LVSIPDGMEPWEDRND 77 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~r--Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 77 (466)
++.+||+++-..+-|++.-+..+.++|+++ +.+|++++.+.+.+.+... +.++ ++.++.. .
T Consensus 6 l~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~~--------p~vd~vi~~~~~--------~ 69 (349)
T 3tov_A 6 LDYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEYN--------PNIDELIVVDKK--------G 69 (349)
T ss_dssp CTTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSSC--------TTCSEEEEECCS--------S
T ss_pred CCCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcC--------CCccEEEEeCcc--------c
Confidence 356899999999999999999999999987 8999999998887766443 3453 4444421 0
Q ss_pred HHHHHHHHHHhccHHHHHHHHHHhcCCCCCc-cEEEeCCCchhHHHHHHHcCCceEE
Q 012314 78 LGKLIEKCLQVMPGKLEELIEEINSREDEKI-DCFIADGNIGWSMEIAKKMNVRGAV 133 (466)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~-DlvV~D~~~~~~~~~A~~lgiP~v~ 133 (466)
... . ...+.++++.+++ .++ |++|.=....-...++...|+|..+
T Consensus 70 ~~~---~-----~~~~~~l~~~Lr~---~~y~D~vidl~~~~rs~~l~~~~~a~~ri 115 (349)
T 3tov_A 70 RHN---S-----ISGLNEVAREINA---KGKTDIVINLHPNERTSYLAWKIHAPITT 115 (349)
T ss_dssp HHH---H-----HHHHHHHHHHHHH---HCCCCEEEECCCSHHHHHHHHHHCCSEEE
T ss_pred ccc---c-----HHHHHHHHHHHhh---CCCCeEEEECCCChHHHHHHHHhCCCeEE
Confidence 000 0 1123345556665 679 9999755555566678888998654
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=97.63 E-value=0.0013 Score=68.06 Aligned_cols=144 Identities=15% Similarity=0.170 Sum_probs=95.0
Q ss_pred CCeEEEEEeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchhHHHHh------cCCceeecccchhhhh
Q 012314 268 PSSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERV------AARGQMISWAPQLRVL 341 (466)
Q Consensus 268 ~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~------~~n~~~~~~~p~~~ll 341 (466)
++.+||.+|-......++.+....+.+++.+.-++|..... ....+++.+.. ++.+.+.+..|..+.|
T Consensus 521 ~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~------~~~~~~l~~~~~~~gi~~~r~~f~~~~~~~~~l 594 (723)
T 4gyw_A 521 EDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFP------AVGEPNIQQYAQNMGLPQNRIIFSPVAPKEEHV 594 (723)
T ss_dssp TTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETT------GGGHHHHHHHHHHTTCCGGGEEEEECCCHHHHH
T ss_pred CCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCc------HHHHHHHHHHHHhcCCCcCeEEECCCCCHHHHH
Confidence 35599999988878899999999999999999999988654 11122333221 2456667888865533
Q ss_pred c-CCCccccee---ccCCchhhhhhhcCcceeeccccc-chhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhc
Q 012314 342 N-HPSIACFLS---HCGWNSTMEGVSNGIPFLCWPYFG-DQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLG 416 (466)
Q Consensus 342 ~-~~~~~~~i~---hgG~~s~~eal~~GvP~l~~P~~~-DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~ 416 (466)
. +..+++++- .+|.+|++|||.+|||+|.++-.. =...-+-.+.. +|+...+-. +.++-.+.-.++-+
T Consensus 595 ~~~~~~Di~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~-~gl~e~ia~------~~~~Y~~~a~~la~ 667 (723)
T 4gyw_A 595 RRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTC-LGCLELIAK------NRQEYEDIAVKLGT 667 (723)
T ss_dssp HHGGGCSEEECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHH-HTCGGGBCS------SHHHHHHHHHHHHH
T ss_pred HHhCCCeEEeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHH-cCCcccccC------CHHHHHHHHHHHhc
Confidence 2 233333665 889999999999999999998322 22223344444 688777742 45555555556666
Q ss_pred CHHHHHHH
Q 012314 417 NQDFKARA 424 (466)
Q Consensus 417 ~~~~r~~a 424 (466)
|.+.+++.
T Consensus 668 d~~~l~~l 675 (723)
T 4gyw_A 668 DLEYLKKV 675 (723)
T ss_dssp CHHHHHHH
T ss_pred CHHHHHHH
Confidence 77665543
|
| >1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7 | Back alignment and structure |
|---|
Probab=97.60 E-value=0.0056 Score=57.26 Aligned_cols=103 Identities=11% Similarity=0.096 Sum_probs=68.4
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhC--CCEEEEEeCCcchHHHHHhhhcCCCCCCCe-EEEecCCCCCCCCCCccHHH
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKH--GFRVTFVNTDYNHKRVVESLQGKNYLGEQI-HLVSIPDGMEPWEDRNDLGK 80 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~r--Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 80 (466)
+||+++...+-|++.-...+.++|+++ +.+|++++.+...+.+... +.+ +++.++.. . ..
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~~~--------p~i~~v~~~~~~--~--~~----- 63 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSRM--------PEVNEAIPMPLG--H--GA----- 63 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTTC--------TTEEEEEEC---------------
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcC--------CccCEEEEecCC--c--cc-----
Confidence 479999988889999999999999987 9999999998776655332 345 34444311 0 00
Q ss_pred HHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEE
Q 012314 81 LIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAV 133 (466)
Q Consensus 81 ~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~ 133 (466)
.....+.++.+.+++ .+||++|.-........++...|+|..+
T Consensus 64 -------~~~~~~~~l~~~l~~---~~~D~vid~~~~~~sa~~~~~~~~~~~i 106 (348)
T 1psw_A 64 -------LEIGERRKLGHSLRE---KRYDRAYVLPNSFKSALVPLFAGIPHRT 106 (348)
T ss_dssp --------CHHHHHHHHHHTTT---TTCSEEEECSCCSGGGHHHHHTTCSEEE
T ss_pred -------cchHHHHHHHHHHHh---cCCCEEEECCCChHHHHHHHHhCCCEEe
Confidence 011234566667766 7899999322233555677888999743
|
| >3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* | Back alignment and structure |
|---|
Probab=97.22 E-value=0.00051 Score=64.03 Aligned_cols=108 Identities=13% Similarity=0.117 Sum_probs=77.4
Q ss_pred Cceeecccchhhh---hcCCCcccceeccC---------CchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEee
Q 012314 328 RGQMISWAPQLRV---LNHPSIACFLSHCG---------WNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFD 395 (466)
Q Consensus 328 n~~~~~~~p~~~l---l~~~~~~~~i~hgG---------~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~ 395 (466)
|+.+.+|+|+.++ |+.++.+++.+-+. .+-+.|++++|+|+|+. +...++..+++. |+|..++
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~----~~~~~~~~v~~~-~~G~~~~ 289 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQ----EGIANQELIENN-GLGWIVK 289 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEE----TTCTTTHHHHHH-TCEEEES
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEc----cChhHHHHHHhC-CeEEEeC
Confidence 8889999998764 54445544543332 23578999999999986 466788888885 9999994
Q ss_pred cCCCCCcCHHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Q 012314 396 RDEGGIITREEIKNKVDQVLGNQ--DFKARALELKEKAMSSVREGGSSYKTFQNFLQW 451 (466)
Q Consensus 396 ~~~~~~~~~~~l~~~i~~ll~~~--~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~ 451 (466)
+.+++.+++.++..+. ++++++++.++++++ |.-..+.+.+.+..
T Consensus 290 -------~~~e~~~~i~~l~~~~~~~m~~na~~~a~~~~~----~~f~k~~l~~~~~~ 336 (339)
T 3rhz_A 290 -------DVEEAIMKVKNVNEDEYIELVKNVRSFNPILRK----GFFTRRLLTESVFQ 336 (339)
T ss_dssp -------SHHHHHHHHHHCCHHHHHHHHHHHHHHTHHHHT----THHHHHHHHHHHHH
T ss_pred -------CHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhc----cHHHHHHHHHHHHH
Confidence 4789999998875332 577888888888775 44556666555544
|
| >2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A* | Back alignment and structure |
|---|
Probab=96.84 E-value=0.012 Score=54.50 Aligned_cols=46 Identities=17% Similarity=0.166 Sum_probs=40.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhC--CCEEEEEeCCcchHHHHHh
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKH--GFRVTFVNTDYNHKRVVES 49 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~r--Gh~Vt~~~~~~~~~~~~~~ 49 (466)
+||+++-..+-|++.-...+.++|+++ +.+|++++.+.+.+.+...
T Consensus 1 ~~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~~~~ 48 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIPSWH 48 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGGGTHHHHTS
T ss_pred CeEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehhhhHHHhcC
Confidence 479999999999999999999999987 8999999999887766543
|
| >1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A* | Back alignment and structure |
|---|
Probab=93.29 E-value=0.8 Score=38.33 Aligned_cols=99 Identities=11% Similarity=0.084 Sum_probs=65.3
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcc-----hHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCcc
Q 012314 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYN-----HKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRND 77 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (466)
+-.|++++..|.|=....+.+|-+.+.+|++|.|+..... +..+.... ++++.....++.-. ...
T Consensus 28 ~g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF~Kg~~~~gE~~~l~~L--------~v~~~~~g~gf~~~--~~~ 97 (196)
T 1g5t_A 28 RGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFIKGTWPNGERNLLEPH--------GVEFQVMATGFTWE--TQN 97 (196)
T ss_dssp CCCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEESSCCSSCCHHHHHHGGG--------TCEEEECCTTCCCC--GGG
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEeeCCCCCccHHHHHHhC--------CcEEEEcccccccC--CCC
Confidence 3478999999999999999999999999999999965432 11222221 47777776644321 111
Q ss_pred HHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCch
Q 012314 78 LGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIG 118 (466)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~ 118 (466)
... -.......+..+.+.+.+ .++|+||.|.+..
T Consensus 98 ~~~----~~~~a~~~l~~a~~~l~~---~~yDlvILDEi~~ 131 (196)
T 1g5t_A 98 REA----DTAACMAVWQHGKRMLAD---PLLDMVVLDELTY 131 (196)
T ss_dssp HHH----HHHHHHHHHHHHHHHTTC---TTCSEEEEETHHH
T ss_pred cHH----HHHHHHHHHHHHHHHHhc---CCCCEEEEeCCCc
Confidence 111 112234456666666655 6899999998643
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* | Back alignment and structure |
|---|
Probab=91.36 E-value=1.1 Score=45.23 Aligned_cols=75 Identities=11% Similarity=0.074 Sum_probs=45.5
Q ss_pred cccchh---------hhhcCCCccccee---ccCC-chhhhhhhcCcceeecccccchhhhHHHHHHh------hhceeE
Q 012314 333 SWAPQL---------RVLNHPSIACFLS---HCGW-NSTMEGVSNGIPFLCWPYFGDQFLNERYICDF------WKVGLK 393 (466)
Q Consensus 333 ~~~p~~---------~ll~~~~~~~~i~---hgG~-~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~------~G~G~~ 393 (466)
.|++.. +++..+++ ||. +=|+ .+++||+++|+|+|+.- -......|.+. -+.|+.
T Consensus 499 ~~L~~~d~lf~~d~~~~~~~adv--fV~PS~~EgfGl~~LEAmA~G~PvI~s~----~gG~~d~V~dg~~~~~~~~tG~l 572 (725)
T 3nb0_A 499 EFLNANNPILGLDYDEFVRGCHL--GVFPSYYEPWGYTPAECTVMGVPSITTN----VSGFGSYMEDLIETNQAKDYGIY 572 (725)
T ss_dssp SCCCTTCSSSCCCHHHHHHHCSE--EECCCSSBSSCHHHHHHHHTTCCEEEET----TBHHHHHHHTTSCHHHHHHTTEE
T ss_pred cccCCCCccchhHHHHHHhhceE--EEeccccCCCCHHHHHHHHcCCCEEEeC----CCChhhhhhccccccCCCCceEE
Confidence 788763 47877777 664 3445 47799999999999874 33343444320 145776
Q ss_pred eecCCCCCcCHHHHHHHHHHHh
Q 012314 394 FDRDEGGIITREEIKNKVDQVL 415 (466)
Q Consensus 394 l~~~~~~~~~~~~l~~~i~~ll 415 (466)
+.+ .+..+.+++.++|.++|
T Consensus 573 V~~--rd~~d~ee~aeaLa~aL 592 (725)
T 3nb0_A 573 IVD--RRFKAPDESVEQLVDYM 592 (725)
T ss_dssp EEC--CSSSCHHHHHHHHHHHH
T ss_pred EeC--CCCCCHHHHHHHHHHHH
Confidence 643 13345555555555554
|
| >2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=89.70 E-value=2.7 Score=33.91 Aligned_cols=109 Identities=15% Similarity=0.181 Sum_probs=66.2
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCccHHHHH
Q 012314 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKLI 82 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (466)
+.+|++.+.++-.|-....-++..|...|++|.........+.+.+.... .+...+.++....
T Consensus 18 ~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~~p~e~lv~aa~~-----~~~diV~lS~~~~------------ 80 (161)
T 2yxb_A 18 RYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLRQTPEQVAMAAVQ-----EDVDVIGVSILNG------------ 80 (161)
T ss_dssp SCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSBCCHHHHHHHHHH-----TTCSEEEEEESSS------------
T ss_pred CCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHh-----cCCCEEEEEeech------------
Confidence 57899999999999999999999999999999998775443433333211 1334443331111
Q ss_pred HHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEE
Q 012314 83 EKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAV 133 (466)
Q Consensus 83 ~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~ 133 (466)
.....++++++.+++.+....-++|.-.....-...++..|+-.++
T Consensus 81 -----~~~~~~~~~i~~L~~~g~~~i~v~vGG~~~~~~~~~l~~~G~d~v~ 126 (161)
T 2yxb_A 81 -----AHLHLMKRLMAKLRELGADDIPVVLGGTIPIPDLEPLRSLGIREIF 126 (161)
T ss_dssp -----CHHHHHHHHHHHHHHTTCTTSCEEEEECCCHHHHHHHHHTTCCEEE
T ss_pred -----hhHHHHHHHHHHHHhcCCCCCEEEEeCCCchhcHHHHHHCCCcEEE
Confidence 1223445555555553211244666665333334456788987544
|
| >1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A* | Back alignment and structure |
|---|
Probab=89.69 E-value=0.67 Score=36.40 Aligned_cols=46 Identities=11% Similarity=0.170 Sum_probs=39.8
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHH
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRV 46 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~ 46 (466)
|++.+|++.+.++-.|-....-++..|..+|++|.........+.+
T Consensus 1 ~~~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~~~p~e~~ 46 (137)
T 1ccw_A 1 MEKKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVLSPQELF 46 (137)
T ss_dssp CCCCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEEECHHHH
T ss_pred CCCCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCCCCCHHHH
Confidence 8888999999999999999999999999999999988775444433
|
| >3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0 | Back alignment and structure |
|---|
Probab=89.05 E-value=0.46 Score=41.52 Aligned_cols=45 Identities=20% Similarity=0.135 Sum_probs=31.9
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHH
Q 012314 2 SRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVE 48 (466)
Q Consensus 2 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~ 48 (466)
++||||+.-=-|. |.--+.+|+++|.+ +|+|+++.+...+.....
T Consensus 10 ~~m~ILlTNDDGi-~apGi~aL~~~l~~-~~~V~VVAP~~~~Sg~g~ 54 (261)
T 3ty2_A 10 PKLRLLLSNDDGV-YAKGLAILAKTLAD-LGEVDVVAPDRNRSGASN 54 (261)
T ss_dssp -CCEEEEECSSCT-TCHHHHHHHHHHTT-TSEEEEEEESSCCTTCTT
T ss_pred CCCeEEEEcCCCC-CCHHHHHHHHHHHh-cCCEEEEecCCCCcCccc
Confidence 4578766553333 44458888999977 899999999887765543
|
| >2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=87.44 E-value=1.6 Score=38.10 Aligned_cols=112 Identities=16% Similarity=0.147 Sum_probs=58.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCccHHHHHH
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKLIE 83 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (466)
+|||+.-=-|. +.--+.+|+++|.+.| +|+++.+...+...-... .....+++.......- ........-+-
T Consensus 2 p~ILlTNDDGi-~apGi~~L~~~l~~~g-~V~VvAP~~~~Sg~g~si----T~~~pl~~~~~~~~~~--~~v~GTPaDCV 73 (251)
T 2wqk_A 2 PTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVGHSL----TFTEPLKMRKIDTDFY--TVIDGTPADCV 73 (251)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCSC----CCSSCEEEEEEETTEE--EETTCCHHHHH
T ss_pred CEEEEEcCCCC-CcHHHHHHHHHHHhCC-CEEEEeeCCCCcccccCc----CCCCCceeEEeeccce--eecCCChHHHH
Confidence 35555432222 2233788899999998 599999987766553332 1123344444321100 00000011111
Q ss_pred HHHHhccHHHHHHHHHHhcCCCCCccEEEeC----------CCch---hHHHHHHHcCCceEEec
Q 012314 84 KCLQVMPGKLEELIEEINSREDEKIDCFIAD----------GNIG---WSMEIAKKMNVRGAVFW 135 (466)
Q Consensus 84 ~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D----------~~~~---~~~~~A~~lgiP~v~~~ 135 (466)
.+ .+..++. + .+||+||.- .++. .|+.-|..+|||.|.++
T Consensus 74 ~l------al~~~l~---~---~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S 126 (251)
T 2wqk_A 74 HL------GYRVILE---E---KKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFS 126 (251)
T ss_dssp HH------HHHTTTT---T---CCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEE
T ss_pred hh------hhhhhcC---C---CCCCEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEE
Confidence 11 1222222 2 689999973 2222 45566678899999987
|
| >3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A* | Back alignment and structure |
|---|
Probab=86.46 E-value=9.4 Score=30.39 Aligned_cols=138 Identities=9% Similarity=0.024 Sum_probs=79.7
Q ss_pred eEEEEEeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCcccc
Q 012314 270 SVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACF 349 (466)
Q Consensus 270 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~~ 349 (466)
+.|-|-.||.+ +...+++....++.++..+-..+-+- -..|+.+.+ |+.... ..-.++++
T Consensus 3 ~~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~sa------HR~p~~~~~----------~~~~a~--~~~~~~Vi 62 (159)
T 3rg8_A 3 PLVIILMGSSS--DMGHAEKIASELKTFGIEYAIRIGSA------HKTAEHVVS----------MLKEYE--ALDRPKLY 62 (159)
T ss_dssp CEEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECCT------TTCHHHHHH----------HHHHHH--TSCSCEEE
T ss_pred CeEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEcc------cCCHHHHHH----------HHHHhh--hcCCCcEE
Confidence 35667777644 67788899999999998876555443 245555331 111111 10023448
Q ss_pred eeccCCc----hhhhhhhcCcceeeccccc---chhhhHHHHHHhh--hceeEeecCCCCCcCHHHHHHHHHHHhcCHHH
Q 012314 350 LSHCGWN----STMEGVSNGIPFLCWPYFG---DQFLNERYICDFW--KVGLKFDRDEGGIITREEIKNKVDQVLGNQDF 420 (466)
Q Consensus 350 i~hgG~~----s~~eal~~GvP~l~~P~~~---DQ~~~a~rv~~~~--G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~ 420 (466)
|.=+|.. ++..++ .-+|+|.+|... +-.+ -.-+.+ + |+.+.-- .+..++..++..|-. ++|+++
T Consensus 63 Ia~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~d-LlS~vq-mp~GvpVatv---~~~~nAa~lA~~Il~-~~d~~l 135 (159)
T 3rg8_A 63 ITIAGRSNALSGFVDGF-VKGATIACPPPSDSFAGAD-IYSSLR-MPSGISPALV---LEPKNAALLAARIFS-LYDKEI 135 (159)
T ss_dssp EEECCSSCCHHHHHHHH-SSSCEEECCCCCCGGGGTH-HHHHHC-CCTTCCCEEC---CSHHHHHHHHHHHHT-TTCHHH
T ss_pred EEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCcc-HHHHHh-CCCCCceEEe---cCchHHHHHHHHHHh-CCCHHH
Confidence 8866643 334333 568999999643 2222 122222 1 5444321 255666666666644 358899
Q ss_pred HHHHHHHHHHHHHH
Q 012314 421 KARALELKEKAMSS 434 (466)
Q Consensus 421 r~~a~~~~~~~~~~ 434 (466)
+++.+..+++..+.
T Consensus 136 ~~kl~~~r~~~~~~ 149 (159)
T 3rg8_A 136 ADSVKSYMESNAQK 149 (159)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99998888877764
|
| >3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A | Back alignment and structure |
|---|
Probab=85.73 E-value=1.8 Score=37.75 Aligned_cols=38 Identities=13% Similarity=0.185 Sum_probs=30.0
Q ss_pred CCCEEEEEcCC--CccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012314 2 SRPRVLVMPAP--AQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (466)
Q Consensus 2 ~~~~il~~~~~--~~GH~~p~l~la~~L~~rGh~Vt~~~~ 39 (466)
++++.+|++.. +.|=..-...|++.|+++|.+|.++=+
T Consensus 19 ~m~k~i~ItgT~t~vGKT~vs~gL~~~L~~~G~~V~~fKP 58 (242)
T 3qxc_A 19 FQGHMLFISATNTNAGKTTCARLLAQYCNACGVKTILLKP 58 (242)
T ss_dssp CCCEEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEECC
T ss_pred hcCcEEEEEeCCCCCcHHHHHHHHHHHHHhCCCceEEEee
Confidence 34566666644 448888999999999999999999853
|
| >1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1 | Back alignment and structure |
|---|
Probab=85.32 E-value=13 Score=29.84 Aligned_cols=145 Identities=17% Similarity=0.122 Sum_probs=83.4
Q ss_pred CeEEEEEeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCccc
Q 012314 269 SSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIAC 348 (466)
Q Consensus 269 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~ 348 (466)
+|.|-|-+||.+ +...+++....++.+|..+-..+-+- -..|+.+.+ |+... ..-.+++
T Consensus 11 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~Sa------HR~p~~l~~----------~~~~a---~~~g~~V 69 (170)
T 1xmp_A 11 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSA------HRTPDYMFE----------YAETA---RERGLKV 69 (170)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT------TTSHHHHHH----------HHHHT---TTTTCCE
T ss_pred CCcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEec------cCCHHHHHH----------HHHHH---HhCCCcE
Confidence 567888888754 67788999999999998876555443 235555332 11110 0011233
Q ss_pred ceeccCCc----hhhhhhhcCcceeecccccc---hhhhHHHHHH--hhhceeE-eecCCCCCcCHHHHHHHHHHHhcCH
Q 012314 349 FLSHCGWN----STMEGVSNGIPFLCWPYFGD---QFLNERYICD--FWKVGLK-FDRDEGGIITREEIKNKVDQVLGNQ 418 (466)
Q Consensus 349 ~i~hgG~~----s~~eal~~GvP~l~~P~~~D---Q~~~a~rv~~--~~G~G~~-l~~~~~~~~~~~~l~~~i~~ll~~~ 418 (466)
+|.=+|.. ++..++ .-+|+|.+|.... -.+--.-+.+ . |+.+. +..++.+..++..++..|- -+.|+
T Consensus 70 iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~daLlSivqmP~-GvpVatV~I~~a~~~nAallAaqIl-a~~d~ 146 (170)
T 1xmp_A 70 IIAGAGGAAHLPGMVAAK-TNLPVIGVPVQSKALNGLDSLLSIVQMPG-GVPVATVAIGKAGSTNAGLLAAQIL-GSFHD 146 (170)
T ss_dssp EEEEEESSCCHHHHHHTT-CCSCEEEEEECCTTTTTHHHHHHHHCCCT-TCCCEECCSSHHHHHHHHHHHHHHH-HTTCH
T ss_pred EEEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhcCCC-CCeeEEEecCCcchHHHHHHHHHHH-ccCCH
Confidence 77765543 333333 4689999998542 1121122222 2 45421 2110013356666666665 45689
Q ss_pred HHHHHHHHHHHHHHHHHhc
Q 012314 419 DFKARALELKEKAMSSVRE 437 (466)
Q Consensus 419 ~~r~~a~~~~~~~~~~~~~ 437 (466)
+++++.+..+++..+.+.+
T Consensus 147 ~l~~kl~~~r~~~~~~v~~ 165 (170)
T 1xmp_A 147 DIHDALELRREAIEKDVRE 165 (170)
T ss_dssp HHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 9999999999988875443
|
| >3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A* | Back alignment and structure |
|---|
Probab=85.23 E-value=7.3 Score=34.01 Aligned_cols=120 Identities=13% Similarity=0.155 Sum_probs=65.4
Q ss_pred CCEEEEEcCC--CccCHHHHHHHHHHHHhCCCEEEEEeCCc------chH--HHHHhhhcCCCCCCCeEEEecCCCCCCC
Q 012314 3 RPRVLVMPAP--AQGHVIPLLEFSQCLAKHGFRVTFVNTDY------NHK--RVVESLQGKNYLGEQIHLVSIPDGMEPW 72 (466)
Q Consensus 3 ~~~il~~~~~--~~GH~~p~l~la~~L~~rGh~Vt~~~~~~------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (466)
+++.+|++.. +-|=..-.+.|++.|+++|++|.++=+.. ..+ .+.... ......+.+.+.....+
T Consensus 25 ~m~~i~Itgt~t~vGKT~vt~gL~~~l~~~G~~V~~fKPv~~g~~~~~~D~~~~~~~~----g~~~~~~~~~~~~p~sP- 99 (251)
T 3fgn_A 25 HMTILVVTGTGTGVGKTVVCAALASAARQAGIDVAVCKPVQTGTARGDDDLAEVGRLA----GVTQLAGLARYPQPMAP- 99 (251)
T ss_dssp SCEEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEEEEECCGGGTCCHHHHHHHHH----CCCEEEEEEECSSSSCH-
T ss_pred CCCEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEeeeecCCCCCCHHHHHHHHHc----CCCCCCCCeeECCCCCh-
Confidence 3455555533 44888999999999999999999986311 111 122211 00011222222211110
Q ss_pred CCCccHHHHHHHHHHh---ccHHHHHHHHHHhcCCCCCccEEEeCCCc----------hhHHHHHHHcCCceEEeccch
Q 012314 73 EDRNDLGKLIEKCLQV---MPGKLEELIEEINSREDEKIDCFIADGNI----------GWSMEIAKKMNVRGAVFWPSS 138 (466)
Q Consensus 73 ~~~~~~~~~~~~~~~~---~~~~~~~ll~~l~~~~~~~~DlvV~D~~~----------~~~~~~A~~lgiP~v~~~~~~ 138 (466)
.....+... ..+.+.+.++++. .++|++|+|... .....+|+.++.|++.+....
T Consensus 100 -------~~aa~~~~~~~~~~~~i~~~~~~l~----~~~D~vlIEGagGl~~pl~~~~~~~adla~~l~~pVILV~~~~ 167 (251)
T 3fgn_A 100 -------AAAAEHAGMALPARDQIVRLIADLD----RPGRLTLVEGAGGLLVELAEPGVTLRDVAVDVAAAALVVVTAD 167 (251)
T ss_dssp -------HHHHHHTTCCCCCHHHHHHHHHTTC----CTTCEEEEECSSSTTCEEETTTEEHHHHHHHTTCEEEEEECSS
T ss_pred -------HHHHHHcCCCCCCHHHHHHHHHHHH----hcCCEEEEECCCCCcCCcCcccchHHHHHHHcCCCEEEEEcCC
Confidence 111111111 1233444555443 578999998731 245689999999999876543
|
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A* | Back alignment and structure |
|---|
Probab=85.00 E-value=4.8 Score=39.06 Aligned_cols=108 Identities=9% Similarity=-0.029 Sum_probs=70.2
Q ss_pred Cceeecccchh---hhhcCCCccccee---ccCCchh-hhhhhcC---cceeecccccchhhhHHHHHHhhh-ceeEeec
Q 012314 328 RGQMISWAPQL---RVLNHPSIACFLS---HCGWNST-MEGVSNG---IPFLCWPYFGDQFLNERYICDFWK-VGLKFDR 396 (466)
Q Consensus 328 n~~~~~~~p~~---~ll~~~~~~~~i~---hgG~~s~-~eal~~G---vP~l~~P~~~DQ~~~a~rv~~~~G-~G~~l~~ 396 (466)
.+++...+|+. .++..+++ ||. .=|+|.+ .|++++| .|+|+--+.+ .+. + +| -|+.+++
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv--~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG----a~~---~-l~~~allVnP 422 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL--LIFNSTVDGQNLSTFEAPLVNERDADVILSETCG----AAE---V-LGEYCRSVNP 422 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE--EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBT----THH---H-HGGGSEEECT
T ss_pred CEEEeCCCCHHHHHHHHHhccE--EEECcccccCChhHHHHHHhCCCCCCEEEeCCCC----CHH---H-hCCCEEEECC
Confidence 46666777764 46767777 543 5688765 9999986 5665543222 222 2 33 4788854
Q ss_pred CCCCCcCHHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHh
Q 012314 397 DEGGIITREEIKNKVDQVLGNQ--DFKARALELKEKAMSSVREGGSSYKTFQNFLQWVKTN 455 (466)
Q Consensus 397 ~~~~~~~~~~l~~~i~~ll~~~--~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~ 455 (466)
.+.++++++|.++|+++ +-+++.+++.+.+.+ -+...-.+.+++.+...
T Consensus 423 -----~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~V~~-----~d~~~W~~~fl~~L~~~ 473 (496)
T 3t5t_A 423 -----FDLVEQAEAISAALAAGPRQRAEAAARRRDAARP-----WTLEAWVQAQLDGLAAD 473 (496)
T ss_dssp -----TBHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTT-----CBHHHHHHHHHHHHHHH
T ss_pred -----CCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH-----CCHHHHHHHHHHHHhhc
Confidence 58999999999999764 445555555555543 45566677777777665
|
| >3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A* | Back alignment and structure |
|---|
Probab=84.43 E-value=7.4 Score=35.64 Aligned_cols=41 Identities=22% Similarity=0.184 Sum_probs=33.3
Q ss_pred CEEEEEc-CCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchH
Q 012314 4 PRVLVMP-APAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHK 44 (466)
Q Consensus 4 ~~il~~~-~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~ 44 (466)
++|+|+. -+|.|=..-...+|..|+++|++|.++..++...
T Consensus 16 ~~i~~~sgkGGvGKTt~a~~lA~~la~~g~~vllid~D~~~~ 57 (334)
T 3iqw_A 16 LRWIFVGGKGGVGKTTTSCSLAIQLAKVRRSVLLLSTDPAHN 57 (334)
T ss_dssp CCEEEEECSTTSSHHHHHHHHHHHHTTSSSCEEEEECCSSCH
T ss_pred eEEEEEeCCCCccHHHHHHHHHHHHHhCCCcEEEEECCCCCC
Confidence 4566655 4555999999999999999999999999986544
|
| >3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=83.18 E-value=3.3 Score=35.62 Aligned_cols=37 Identities=3% Similarity=0.063 Sum_probs=29.1
Q ss_pred CCEEEEEcCC--CccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012314 3 RPRVLVMPAP--AQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (466)
Q Consensus 3 ~~~il~~~~~--~~GH~~p~l~la~~L~~rGh~Vt~~~~ 39 (466)
+++.+|++.. +-|=..-...|++.|+++|++|.++=+
T Consensus 3 ~mk~i~Itgt~t~vGKT~vt~~L~~~l~~~G~~V~~~KP 41 (228)
T 3of5_A 3 AMKKFFIIGTDTEVGKTYISTKLIEVCEHQNIKSLCLKP 41 (228)
T ss_dssp TCEEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEECS
T ss_pred CCcEEEEEeCCCCCCHHHHHHHHHHHHHHCCCeeEEecc
Confidence 4555555543 448899999999999999999999853
|
| >2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A | Back alignment and structure |
|---|
Probab=83.10 E-value=6.8 Score=35.79 Aligned_cols=34 Identities=26% Similarity=0.157 Sum_probs=23.7
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~ 39 (466)
|.++||+|+. + -+-...+.++|.++||+|..+.+
T Consensus 20 ~~~mrIvf~G---~--~~fa~~~L~~L~~~~~~i~~Vvt 53 (329)
T 2bw0_A 20 FQSMKIAVIG---Q--SLFGQEVYCHLRKEGHEVVGVFT 53 (329)
T ss_dssp -CCCEEEEEC---C--HHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCCEEEEEc---C--cHHHHHHHHHHHHCCCeEEEEEe
Confidence 5568999992 2 23334567899999999987665
|
| >4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A* | Back alignment and structure |
|---|
Probab=81.88 E-value=8.4 Score=31.97 Aligned_cols=75 Identities=17% Similarity=0.177 Sum_probs=49.2
Q ss_pred CCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCccHHHHHHHHHHhcc
Q 012314 11 APAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKLIEKCLQVMP 90 (466)
Q Consensus 11 ~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (466)
-+|.|=..-...||..|+++|++|.++-.++......-.. ....++.+...+.
T Consensus 10 kgG~GKTt~a~~la~~la~~g~~vlliD~D~~~~~~~~~~----~~~~~~~~~~~~~----------------------- 62 (206)
T 4dzz_A 10 KGGSGKTTAVINIATALSRSGYNIAVVDTDPQMSLTNWSK----AGKAAFDVFTAAS----------------------- 62 (206)
T ss_dssp STTSSHHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHT----TSCCSSEEEECCS-----------------------
T ss_pred CCCccHHHHHHHHHHHHHHCCCeEEEEECCCCCCHHHHHh----cCCCCCcEEecCc-----------------------
Confidence 3456888899999999999999999998875544332221 1112344433221
Q ss_pred HHHHHHHHHHhcCCCCCccEEEeCCC
Q 012314 91 GKLEELIEEINSREDEKIDCFIADGN 116 (466)
Q Consensus 91 ~~~~~ll~~l~~~~~~~~DlvV~D~~ 116 (466)
..+.++++.++ ..+|+||.|.-
T Consensus 63 ~~l~~~l~~l~----~~yD~viiD~~ 84 (206)
T 4dzz_A 63 EKDVYGIRKDL----ADYDFAIVDGA 84 (206)
T ss_dssp HHHHHTHHHHT----TTSSEEEEECC
T ss_pred HHHHHHHHHhc----CCCCEEEEECC
Confidence 34566666665 45999999973
|
| >3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A* | Back alignment and structure |
|---|
Probab=81.30 E-value=19 Score=28.78 Aligned_cols=146 Identities=14% Similarity=0.090 Sum_probs=81.4
Q ss_pred eEEEEEeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCcccc
Q 012314 270 SVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACF 349 (466)
Q Consensus 270 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~~ 349 (466)
|.|-|-.||.+ +...+++....++.+|..+-..+-+- -..|+.+. +|+.. +....++++
T Consensus 6 p~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~Sa------HRtp~~l~----------~~~~~---~~~~g~~Vi 64 (166)
T 3oow_A 6 VQVGVIMGSKS--DWSTMKECCDILDNLGIGYECEVVSA------HRTPDKMF----------DYAET---AKERGLKVI 64 (166)
T ss_dssp EEEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECCT------TTCHHHHH----------HHHHH---TTTTTCCEE
T ss_pred CeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEcC------cCCHHHHH----------HHHHH---HHhCCCcEE
Confidence 46777788754 67788899999999998765555443 23555533 22111 111223448
Q ss_pred eeccCCc----hhhhhhhcCcceeecccccc---hhhhHHHHHHh-hhceeEe-ecCCCCCcCHHHHHHHHHHHhcCHHH
Q 012314 350 LSHCGWN----STMEGVSNGIPFLCWPYFGD---QFLNERYICDF-WKVGLKF-DRDEGGIITREEIKNKVDQVLGNQDF 420 (466)
Q Consensus 350 i~hgG~~----s~~eal~~GvP~l~~P~~~D---Q~~~a~rv~~~-~G~G~~l-~~~~~~~~~~~~l~~~i~~ll~~~~~ 420 (466)
|.=+|.. ++..++ .-+|+|.+|...- -.+--.-+.+- -|+++.. ..++.+..++..++..|-. ++|+++
T Consensus 65 Ia~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~vqmp~gvpVatV~I~~ag~~nAa~lAa~Il~-~~d~~l 142 (166)
T 3oow_A 65 IAGAGGAAHLPGMVAAK-TTLPVLGVPVKSSTLNGQDSLLSIVQMPAGIPVATFAIGMAGAKNAALFAASILQ-HTDINI 142 (166)
T ss_dssp EEEECSSCCHHHHHHHT-CSSCEEEEECCCTTTTTHHHHHHHHTCCTTSCCEECCSTHHHHHHHHHHHHHHHG-GGCHHH
T ss_pred EEECCcchhhHHHHHhc-cCCCEEEeecCcCCCCCHHHHHHHhcCCCCCceEEEecCCccchHHHHHHHHHHc-CCCHHH
Confidence 8866643 333333 3689999998432 11211111110 1433332 1100013455556655544 358999
Q ss_pred HHHHHHHHHHHHHHHhcC
Q 012314 421 KARALELKEKAMSSVREG 438 (466)
Q Consensus 421 r~~a~~~~~~~~~~~~~~ 438 (466)
+++.+..++...+.+.+.
T Consensus 143 ~~kl~~~r~~~~~~v~~~ 160 (166)
T 3oow_A 143 AKALAEFRAEQTRFVLEN 160 (166)
T ss_dssp HHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 999999999988765443
|
| >2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum} | Back alignment and structure |
|---|
Probab=81.18 E-value=2.9 Score=38.16 Aligned_cols=35 Identities=20% Similarity=0.325 Sum_probs=26.7
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhC-C-CEEEEEeCCc
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKH-G-FRVTFVNTDY 41 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~r-G-h~Vt~~~~~~ 41 (466)
|++++|+++..+.. .++++.|++. | ++|.++...+
T Consensus 2 m~~~~Ili~g~g~~------~~l~~~l~~~~~~~~v~~~d~~~ 38 (331)
T 2pn1_A 2 MQKPHLLITSAGRR------AKLVEYFVKEFKTGRVSTADCSP 38 (331)
T ss_dssp TTCCEEEEESCTTC------HHHHHHHHHHCCSSEEEEEESCT
T ss_pred CccceEEEecCCch------HHHHHHHHHhcCCCEEEEEeCCC
Confidence 88999999855443 4789999886 6 8888886653
|
| >2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824} | Back alignment and structure |
|---|
Probab=80.66 E-value=7.4 Score=32.47 Aligned_cols=45 Identities=16% Similarity=0.277 Sum_probs=36.6
Q ss_pred cHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEEeccchhH
Q 012314 90 PGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAA 140 (466)
Q Consensus 90 ~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~~~~~~ 140 (466)
....++.++.+++ .++|+||.|.. +..+|+++|+|.+.+.++..+
T Consensus 128 ~~e~~~~i~~l~~---~G~~vvVG~~~---~~~~A~~~Gl~~vli~sg~eS 172 (196)
T 2q5c_A 128 EDEITTLISKVKT---ENIKIVVSGKT---VTDEAIKQGLYGETINSGEES 172 (196)
T ss_dssp GGGHHHHHHHHHH---TTCCEEEECHH---HHHHHHHTTCEEEECCCCHHH
T ss_pred HHHHHHHHHHHHH---CCCeEEECCHH---HHHHHHHcCCcEEEEecCHHH
Confidence 3466778888887 67999999864 689999999999998875554
|
| >4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=80.31 E-value=8.3 Score=36.25 Aligned_cols=36 Identities=14% Similarity=0.143 Sum_probs=27.7
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~ 41 (466)
|+++||+++..+.. .+.+++++++.|++|.++..+.
T Consensus 5 ~~~~~ilI~g~g~~-----~~~~~~a~~~~G~~~v~v~~~~ 40 (403)
T 4dim_A 5 YDNKRLLILGAGRG-----QLGLYKAAKELGIHTIAGTMPN 40 (403)
T ss_dssp -CCCEEEEECCCGG-----GHHHHHHHHHHTCEEEEEECSS
T ss_pred cCCCEEEEECCcHh-----HHHHHHHHHHCCCEEEEEcCCC
Confidence 56788988876643 3668999999999999997643
|
| >2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A | Back alignment and structure |
|---|
Probab=80.23 E-value=13 Score=30.43 Aligned_cols=130 Identities=10% Similarity=0.027 Sum_probs=64.9
Q ss_pred chhhhccCCCCeEEEEEecc-ccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchhHHHHhcCCceeecccch
Q 012314 259 CLKWLDQQQPSSVVYVSFGS-FTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQ 337 (466)
Q Consensus 259 l~~~~~~~~~~~~v~vs~Gs-~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~ 337 (466)
+-.++.+.. ..+|+-|. .+ .+....++....+-+++-++... ....+... -....+++..+.
T Consensus 37 lg~~La~~g---~~lVsGGg~~G-----im~aa~~gAl~~gG~tigVlP~~-----~~~~~~~~----~~~~i~~~~~~~ 99 (176)
T 2iz6_A 37 LGKQIATHG---WILLTGGRSLG-----VMHEAMKGAKEAGGTTIGVLPGP-----DTSEISDA----VDIPIVTGLGSA 99 (176)
T ss_dssp HHHHHHHTT---CEEEEECSSSS-----HHHHHHHHHHHTTCCEEEEECC----------CCTT----CSEEEECCCCSS
T ss_pred HHHHHHHCC---CEEEECCCccC-----HhHHHHHHHHHcCCEEEEEeCch-----hhhhhccC----CceeEEcCCHHH
Confidence 445555532 45555553 22 44555555555566666665422 01111110 111234455554
Q ss_pred h-hhh-cCCCcccceeccCCchh---hhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHH
Q 012314 338 L-RVL-NHPSIACFLSHCGWNST---MEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVD 412 (466)
Q Consensus 338 ~-~ll-~~~~~~~~i~hgG~~s~---~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~ 412 (466)
. .++ ..++. .++--||.||. .|++.+++|++++|.|. .....+.+. -..... -.-+++++.+.+.
T Consensus 100 Rk~~m~~~sda-~IvlpGg~GTL~E~~~al~~~kpV~~l~~~~---~~~gfi~~~-~~~~i~-----~~~~~~e~~~~l~ 169 (176)
T 2iz6_A 100 RDNINALSSNV-LVAVGMGPGTAAEVALALKAKKPVVLLGTQP---EAEKFFTSL-DAGLVH-----VAADVAGAIAAVK 169 (176)
T ss_dssp SCCCCGGGCSE-EEEESCCHHHHHHHHHHHHTTCCEEEESCCH---HHHHHHHHH-CTTTEE-----EESSHHHHHHHHH
T ss_pred HHHHHHHhCCE-EEEecCCccHHHHHHHHHHhCCcEEEEcCcc---cccccCChh-hcCeEE-----EcCCHHHHHHHHH
Confidence 3 333 33443 45557888876 45578999999999843 111122221 122222 1236788887777
Q ss_pred HHh
Q 012314 413 QVL 415 (466)
Q Consensus 413 ~ll 415 (466)
+.+
T Consensus 170 ~~~ 172 (176)
T 2iz6_A 170 QLL 172 (176)
T ss_dssp HHH
T ss_pred HHH
Confidence 665
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 466 | ||||
| d2pq6a1 | 473 | c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransfe | 4e-88 | |
| d2c1xa1 | 450 | c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-gluc | 7e-84 | |
| d2vcha1 | 471 | c.87.1.10 (A:6-476) Hydroquinone glucosyltransfera | 5e-83 | |
| d2acva1 | 461 | c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transf | 9e-78 | |
| d1iira_ | 401 | c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycol | 5e-40 | |
| d1rrva_ | 401 | c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Am | 8e-40 | |
| d1pn3a_ | 391 | c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA | 6e-30 |
| >d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]} Length = 473 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: (Iso)flavonoid glycosyltransferase species: Medicago truncatula [TaxId: 3880]
Score = 275 bits (703), Expect = 4e-88
Identities = 144/473 (30%), Positives = 236/473 (49%), Gaps = 30/473 (6%)
Query: 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLG-EQIH 61
+P V+++P P QGH+ PL + ++ L GF +TFVNT+YNHKR+++S K + G +
Sbjct: 1 KPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFN 60
Query: 62 LVSIPDGMEPWEDRNDLGKLIEKCLQVMPGKLEELIEEI-----NSREDEKIDCFIADGN 116
SIPDG+ P E D+ + + Q + + E+ +S + C ++D
Sbjct: 61 FESIPDGLTPMEGDGDVSQDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCC 120
Query: 117 IGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSHGTPMSMQMFRIA---- 172
+ ++++ A++ + +++ SSA S+ V ++ GII
Sbjct: 121 MSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVERGIIPFKDESYLTNGCLETKVDW 180
Query: 173 -PKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEA----- 226
P + +D I I + + N+ ELES+
Sbjct: 181 IPGLKNFRLKD-IVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESDVINALS 239
Query: 227 ------FTTFPELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFT 280
+ P + ++L + W ED+ CL WL+ ++P SVVYV+FGS T
Sbjct: 240 STIPSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTT 299
Query: 281 ILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRV 340
++ Q E A GL CK+ FLW++RPD+ + + F +A RG + SW PQ +V
Sbjct: 300 VMTPEQLLEFAWGLANCKKSFLWIIRPDLVIGGSVIFSSEFTNEIADRGLIASWCPQDKV 359
Query: 341 LNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGG 400
LNHPSI FL+HCGWNST E + G+P LCWP+F DQ + R+IC+ W++G++ D +
Sbjct: 360 LNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEIDTN--- 416
Query: 401 IITREEIKNKVDQVLGN---QDFKARALELKEKAMSSVREGGSSYKTFQNFLQ 450
+ REE+ +++V+ + K +A+ELK+KA + R GG SY ++
Sbjct: 417 -VKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKVIK 468
|
| >d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]} Length = 450 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: UDP glucose:flavonoid 3-o-glucosyltransferase species: Grape (Vitis vinifera) [TaxId: 29760]
Score = 263 bits (672), Expect = 7e-84
Identities = 117/455 (25%), Positives = 195/455 (42%), Gaps = 18/455 (3%)
Query: 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFV--NTDYNHKRVVESLQGKNYLGEQIH 61
P V V+ P H PLL + LA F +T ++ + + I
Sbjct: 2 PHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMHT--MQCNIK 59
Query: 62 LVSIPDGM-EPWEDRNDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWS 120
I DG+ E + + IE + P + + + + C +AD I ++
Sbjct: 60 SYDISDGVPEGYVFAGRPQEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFA 119
Query: 121 MEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSHGTPMSMQMFRIAPKMPEMNS 180
++A +M V FW + S++ I ++ + + ++ P M ++
Sbjct: 120 ADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIGVSGIQGRE-DELLNFIPGMSKVRF 178
Query: 181 RDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTFPELLPIGPLL 240
RD + +F +L R + + F NS EL+ L +
Sbjct: 179 RDLQEGIVFGNL-NSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLKSKLKTYLNI 237
Query: 241 ASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRP 300
L + CL+WL +++P+SVVY+SFG+ T + L+ LE + P
Sbjct: 238 GPFNLITPPP-VVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVP 296
Query: 301 FLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTME 360
F+W +R PEGF E+ G ++ WAPQ VL H ++ F++HCGWNS E
Sbjct: 297 FIWSLRDKARVH----LPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWE 352
Query: 361 GVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGN--- 417
V+ G+P +C P+FGDQ LN R + D ++G+ R EGG+ T+ + + DQ+L
Sbjct: 353 SVAGGVPLICRPFFGDQRLNGRMVEDVLEIGV---RIEGGVFTKSGLMSCFDQILSQEKG 409
Query: 418 QDFKARALELKEKAMSSVREGGSSYKTFQNFLQWV 452
+ + L+E A +V GSS + F + V
Sbjct: 410 KKLRENLRALRETADRAVGPKGSSTENFITLVDLV 444
|
| >d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 471 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Hydroquinone glucosyltransferase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 261 bits (668), Expect = 5e-83
Identities = 125/471 (26%), Positives = 195/471 (41%), Gaps = 30/471 (6%)
Query: 4 PRVLVMPAPAQGHVIPLLEFSQCLAK-HGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHL 62
P V ++P+P GH+IPL+EF++ L HG VTFV + + L I
Sbjct: 2 PHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQR-TVLDSLPSSISS 60
Query: 63 VSIPDGM-EPWEDRNDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSM 121
V +P + I + +L ++ + + D +
Sbjct: 61 VFLPPVDLTDLSSSTRIESRISLTVTRSNPELRKVFDS-FVEGGRLPTALVVDLFGTDAF 119
Query: 122 EIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSHGTPMSMQMFRIAPKMPEMNSR 181
++A + +V +F+P++A ++ +PKL + + + + P
Sbjct: 120 DVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSCEFRELTEPLML-------PGCVPV 172
Query: 182 DCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTFPELLPIGP--- 238
+ + L NT+ N+ +ELE A E P
Sbjct: 173 AGKDFLDPAQDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPGLDKPPVY 232
Query: 239 LLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCK 298
+ E+S CLKWLD Q SV+YVSFGS L Q ELALGL +
Sbjct: 233 PVGPLVNIGKQEAKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSE 292
Query: 299 RPFLWVVRPD------------ITTDANDRYPEGFQERVAARG-QMISWAPQLRVLNHPS 345
+ FLWV+R TD P GF ER RG + WAPQ +VL HPS
Sbjct: 293 QRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPS 352
Query: 346 IACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITRE 405
FL+HCGWNST+E V +GIP + WP + +Q +N + + + L+ + G++ RE
Sbjct: 353 TGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDGLVRRE 412
Query: 406 EIKNKVDQVLGN---QDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVK 453
E+ V ++ + + + ELKE A +++ G+S K K
Sbjct: 413 EVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVALKWK 463
|
| >d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]} Length = 461 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Triterpene UDP-glucosyl transferase UGT71G1 species: Medicago truncatula [TaxId: 3880]
Score = 248 bits (632), Expect = 9e-78
Identities = 108/466 (23%), Positives = 188/466 (40%), Gaps = 25/466 (5%)
Query: 2 SRPRVLVMPAPAQGHVIPLLEFSQCLAKHG--FRVTFVNTDYNHKRVVESLQGKNY-LGE 58
++ +PAP GH+ LEF++ L H +T + +S
Sbjct: 6 KNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQP 65
Query: 59 QIHLVSIPDGM-EPWEDRNDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNI 117
QI L+ +P+ P E I L+ + ++ I+ I S K+ + D
Sbjct: 66 QIQLIDLPEVEPPPQELLKSPEFYILTFLESLIPHVKATIKTILSN---KVVGLVLDFFC 122
Query: 118 GWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSHGTPMSMQMFRIAPKMPE 177
+++ + + +F S+ ++L+ + + + D Q+ I +
Sbjct: 123 VSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIEEVFDDSDRDH--QLLNIPGISNQ 180
Query: 178 MNSRDCFWAHIGDWTSQKIFFDLLERNTRA---MIAVNFHFCNSTYELESEAFTTFPELL 234
+ S A ++ L ER ++ S+ + + P +
Sbjct: 181 VPSNVLPDACFNKDGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDHDEKIPPIY 240
Query: 235 PIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVS-FGSFTILDQVQFQELALG 293
+GPLL N + LKWLD+Q SVV++ Q +E+ALG
Sbjct: 241 AVGPLLDLKGQPNPKL-DQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALG 299
Query: 294 LELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMI--SWAPQLRVLNHPSIACFLS 351
L+ FLW + +PEGF E + G+ + WAPQ+ VL H +I F+S
Sbjct: 300 LKHSGVRFLWSNSAE-----KKVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVS 354
Query: 352 HCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDE---GGIITREEIK 408
HCGWNS +E + G+P L WP + +Q LN + W VGL D ++ EEI+
Sbjct: 355 HCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRKGSDVVAAEEIE 414
Query: 409 NKVDQVLGN-QDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVK 453
+ ++ + E+KE + ++V +GGSS + + +
Sbjct: 415 KGLKDLMDKDSIVHKKVQEMKEMSRNAVVDGGSSLISVGKLIDDIT 460
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} Length = 401 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Score = 146 bits (368), Expect = 5e-40
Identities = 54/441 (12%), Positives = 110/441 (24%), Gaps = 57/441 (12%)
Query: 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVS 64
RVL+ ++G PL+ + + G V +R+ E + V
Sbjct: 2 RVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAEV---------GVPHVP 52
Query: 65 IPDGMEPWEDRNDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIA 124
+ R E + + +EI + +
Sbjct: 53 VGPSARAPIQRAK-PLTAEDVRRFTTEAIATQFDEIPAAAEGCAAV-------------- 97
Query: 125 KKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSHGTPMSMQMFRIAPKMPEMNSRDCF 184
V AA++ + KL H + P + E +++D
Sbjct: 98 --------VTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVPSPYYPPPPLGEPSTQDTI 149
Query: 185 ----WAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTFPELLPIGPLL 240
+ ++ + + LL + A+ + + P L P+ P
Sbjct: 150 DIPAQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTDHPWVAADPVLAPLQPTD 209
Query: 241 ASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRP 300
+ + A E + + + R
Sbjct: 210 L-DAVQTGAWILPDERPLSPELAAFLDAGPPPVYLGFGSLGAPADAVRVAIDAIRAHGRR 268
Query: 301 FLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTME 360
+ + A I + +A + H G +T
Sbjct: 269 VILSRGWA----------DLVLPDDGADCFAIGEVNHQVLFGR--VAAVIHHGGAGTTHV 316
Query: 361 GVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDF 420
G P + P DQ + + VG+ D T + + + L +
Sbjct: 317 AARAGAPQILLPQMADQPYYAGRVAE-LGVGVAHDGPI---PTFDSLSAALATALTP-ET 371
Query: 421 KARALELKEKAMSSVREGGSS 441
ARA + + +G +
Sbjct: 372 HARATAVAGTIRT---DGAAV 389
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} Length = 401 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Score = 145 bits (367), Expect = 8e-40
Identities = 48/431 (11%), Positives = 106/431 (24%), Gaps = 49/431 (11%)
Query: 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVS 64
RVL+ +G V + + L G + + + + V
Sbjct: 2 RVLLSVCGTRGDVEIGVALADRLKALGVQTRMC-APPAAEERLAE--------VGVPHVP 52
Query: 65 IPDGMEPWEDRNDLGKLIEKCLQVMPGKLEELIEEINS--REDEKIDCFIADGNIGWSME 122
+ E+ ++ +E + + +
Sbjct: 53 VGLPQHMMLQEGMPPPPPEEEQRLAAMTVEMQFDAVPGAAEGCAAVVAVGDLAAATGVRS 112
Query: 123 IAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSHGTPMSMQMFRIAPKMPEMNSRD 182
+A+K+ + PS + + G ++
Sbjct: 113 VAEKLGLPFFYSVPSPVY----LASPHLPPAYDEPTTPGVTDIRVLWEERAAR------- 161
Query: 183 CFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTFPELLPIGPLLAS 242
F G +++ L + + + + G L S
Sbjct: 162 -FADRYGPTLNRRRAEIGLPPVEDVFGYGHGERPLLAADPVLAPLQPDVDAVQTGAWLLS 220
Query: 243 NRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRPFL 302
+ +L P V++ FGS + ++A+ + +
Sbjct: 221 DE--------RPLPPELEAFLAAGSP--PVHIGFGSSSGRGIADAAKVAVEAIRAQGRRV 270
Query: 303 WVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGV 362
+ R + E I + +A + H +
Sbjct: 271 ILSR---------GWTELVLPDDRDDCFAIDEVNFQALFRR--VAAVIHHGSAGTEHVAT 319
Query: 363 SNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKA 422
G+P L P DQ + +G+ D T E + + VL + +A
Sbjct: 320 RAGVPQLVIPRNTDQPYFAGRVAA-LGIGVAHDGPT---PTFESLSAALTTVLAP-ETRA 374
Query: 423 RALELKEKAMS 433
RA + ++
Sbjct: 375 RAEAVAGMVLT 385
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} Length = 391 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Score = 118 bits (295), Expect = 6e-30
Identities = 56/441 (12%), Positives = 121/441 (27%), Gaps = 69/441 (15%)
Query: 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVS 64
RVL+ ++G PL+ + L + G +R ++ +
Sbjct: 2 RVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERC-----------AEVGVPM 50
Query: 65 IPDGMEPWEDRNDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIA 124
+P G + G+L +V+ + E +++ E D + G + ++
Sbjct: 51 VPVGRAVRAGAREPGELPPGAAEVVTEVVAEWFDKV-PAAIEGCDAVVTTGLLPAAV--- 106
Query: 125 KKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSHGTPMSMQMFRIAPKMPEMNSRDCF 184
+ S+A IP D + S + + + D
Sbjct: 107 -------------AVRSMAEKLGIPYRYTVLSPDHLPSEQSQAERDMYNQGADRLFGDAV 153
Query: 185 WAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTFPELLPIGPLLASNR 244
+H + + + + + L T + +L R
Sbjct: 154 NSHRASIGLPPV------EHLYDYGYTDQPWLAADPVLSPLRPTDLGTVQTGAWILPDER 207
Query: 245 LGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWV 304
S L+ + V S + + R +
Sbjct: 208 ----------PLSAELEAFLAAGSTPVYVGFGSSSRPATADAAKMAIKAVRASGRRIVLS 257
Query: 305 VRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSN 364
+D A ++ + +A + H +T+ +
Sbjct: 258 RGWADLVLPDD----------GADCFVVGEVNLQELFGR--VAAAIHHDSAGTTLLAMRA 305
Query: 365 GIPFLCWPYFGD----QFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDF 420
GIP + D Q + + + VG+ D T + + +D L +
Sbjct: 306 GIPQIVVRRVVDNVVEQAYHADRVAE-LGVGVAVDGPV---PTIDSLSAALDTAL-APEI 360
Query: 421 KARALELKEKAMSSVREGGSS 441
+ARA + + R G++
Sbjct: 361 RARATTVADTI----RADGTT 377
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 466 | |||
| d2c1xa1 | 450 | UDP glucose:flavonoid 3-o-glucosyltransferase {Gra | 100.0 | |
| d2pq6a1 | 473 | (Iso)flavonoid glycosyltransferase {Medicago trunc | 100.0 | |
| d2acva1 | 461 | Triterpene UDP-glucosyl transferase UGT71G1 {Medic | 100.0 | |
| d2vcha1 | 471 | Hydroquinone glucosyltransferase {Thale cress (Ara | 100.0 | |
| d1rrva_ | 401 | TDP-vancosaminyltransferase GftD {Amycolatopsis or | 100.0 | |
| d1iira_ | 401 | UDP-glucosyltransferase GtfB {Amycolatopsis orient | 100.0 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 100.0 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 99.92 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 99.12 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.03 | |
| d1o6ca_ | 377 | UDP-N-acetylglucosamine 2-epimerase {Bacillus subt | 98.89 | |
| d1v4va_ | 373 | UDP-N-acetylglucosamine 2-epimerase {Thermus therm | 98.84 | |
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 98.71 | |
| d1f6da_ | 376 | UDP-N-acetylglucosamine 2-epimerase {Escherichia c | 98.53 | |
| d2f9fa1 | 166 | First mannosyl transferase WbaZ {Archaeoglobus ful | 98.17 | |
| d1pswa_ | 348 | ADP-heptose LPS heptosyltransferase II {Escherichi | 97.6 | |
| d2bfwa1 | 196 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 97.21 | |
| d1ccwa_ | 137 | Glutamate mutase, small subunit {Clostridium cochl | 94.08 | |
| d1xmpa_ | 155 | N5-CAIR mutase (phosphoribosylaminoimidazole carbo | 89.04 | |
| d1gsoa2 | 105 | Glycinamide ribonucleotide synthetase (GAR-syn), N | 86.99 | |
| d1j9ja_ | 247 | SurE homolog TM1662 {Thermotoga maritima [TaxId: 2 | 86.77 | |
| d1qkka_ | 140 | Transcriptional regulatory protein DctD, receiver | 85.74 | |
| d1uqta_ | 456 | Trehalose-6-phosphate synthase, OtsA {Escherichia | 85.73 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 84.82 | |
| d1j6ua1 | 89 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 84.65 | |
| d1u11a_ | 159 | N5-CAIR mutase (phosphoribosylaminoimidazole carbo | 84.32 | |
| d1j8yf2 | 211 | GTPase domain of the signal sequence recognition p | 83.09 | |
| d1o4va_ | 169 | N5-CAIR mutase (phosphoribosylaminoimidazole carbo | 82.6 | |
| d2qy9a2 | 211 | GTPase domain of the signal recognition particle r | 82.09 | |
| d1u7za_ | 223 | Coenzyme A biosynthesis bifunctional protein CoaBC | 81.84 | |
| d1yioa2 | 128 | Response regulatory protein StyR, N-terminal domai | 81.47 | |
| d1qcza_ | 163 | N5-CAIR mutase (phosphoribosylaminoimidazole carbo | 80.47 | |
| d7reqa2 | 168 | Methylmalonyl-CoA mutase alpha subunit, C-terminal | 80.01 |
| >d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: UDP glucose:flavonoid 3-o-glucosyltransferase species: Grape (Vitis vinifera) [TaxId: 29760]
Probab=100.00 E-value=5e-57 Score=445.64 Aligned_cols=437 Identities=27% Similarity=0.445 Sum_probs=322.2
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCC-CCccHHHHH
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWE-DRNDLGKLI 82 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 82 (466)
.||+|+|+|++||++|+++||++|++|||+|||++.....................+++..++++++... ........+
T Consensus 2 ~hvl~~p~P~~gH~~p~l~la~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (450)
T d2c1xa1 2 PHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMHTMQCNIKSYDISDGVPEGYVFAGRPQEDI 81 (450)
T ss_dssp CEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC-------CTTEEEEECCCCCCTTCCCCCCTTHHH
T ss_pred CEEEEECchhHhHHHHHHHHHHHHHHCCCcEEEEEccCccchhhhhcccccccCCCceeeecCCCCCcchhhccchHHHH
Confidence 6999999999999999999999999999999999865433322222211122345688888888776552 223333333
Q ss_pred HHHHHhc-cHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEEeccchhHHHHHHhhcccccccCccCCCC
Q 012314 83 EKCLQVM-PGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSHG 161 (466)
Q Consensus 83 ~~~~~~~-~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 161 (466)
..+.... ....+.+.+.+.... .++|+||+|.+..|+..+|+.+|+|++.+++.+.........++........+..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~-~~~Dlvi~D~~~~~~~~~a~~~~~p~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 159 (450)
T d2c1xa1 82 ELFTRAAPESFRQGMVMAVAETG-RPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIGVSGI- 159 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHT-CCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHHHHHCSSCC-
T ss_pred HHHHHHHHHHhHHHHHHHHHhCC-CCCeEEEECCccHHHHHHHHHhCCCEEEEecCchhhhhhhhcccccccccCCCcc-
Confidence 3333322 222333344333333 7899999999989999999999999999998888776665544332221111110
Q ss_pred CCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHH----HhhcCCcceec
Q 012314 162 TPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEA----FTTFPELLPIG 237 (466)
Q Consensus 162 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~----~~~~p~v~~VG 237 (466)
.........+.++...+...... ...........+........+....++.+..++...+.... .+..|++.++|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~g 238 (450)
T d2c1xa1 160 QGREDELLNFIPGMSKVRFRDLQ-EGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLKSKLKTYLNIG 238 (450)
T ss_dssp TTCTTCBCTTSTTCTTCBGGGSC-TTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHHHSSCEEECC
T ss_pred ccccccccccCCcccchhHhhhh-hhhhcccchHHHHHHHHHHHhhhhcccccccccHHhhhhhhhhhccccCCceeecC
Confidence 11222222333444433333333 33334444566667777767777888889999887765322 44578888899
Q ss_pred cccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCC
Q 012314 238 PLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRY 317 (466)
Q Consensus 238 pl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~ 317 (466)
++....... ..+.++++..|+...+.+++||+++||......+++..++.+++..+++++|++... ....+
T Consensus 239 ~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~v~~s~gs~~~~~~~~~~~~~~~~~~~~~~vl~~~~~~----~~~~l 309 (450)
T d2c1xa1 239 PFNLITPPP-----VVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSLRDK----ARVHL 309 (450)
T ss_dssp CHHHHC--------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEEECCGG----GGGGS
T ss_pred CccccCCCC-----CCcchhhhccccccCCccceeeecccccccCCHHHHHHHHHHHHhcCCeEEEEECCC----ccccC
Confidence 877655432 234566788899998888999999999988899999999999999999999998765 33567
Q ss_pred chhHHHHhcCCceeecccchhhhhcCCCcccceeccCCchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecC
Q 012314 318 PEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRD 397 (466)
Q Consensus 318 ~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~ 397 (466)
++++..+.+.|+.+.+|+||.++|.|++|++||||||+||++||+++|||||++|+++||+.||+|+++++|+|+.++.
T Consensus 310 ~~~~~~~~~~nv~~~~~~pq~~lL~hp~~~~fItHGG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~- 388 (450)
T d2c1xa1 310 PEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEG- 388 (450)
T ss_dssp CTTHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECGG-
T ss_pred ChhhhhhccccccccccCChHhhhccCceeEEEccCCccHHHHHHHcCCCEEecccccchHHHHHHHHHHcCcEEEecC-
Confidence 7887778899999999999999999999999999999999999999999999999999999999999763599999985
Q ss_pred CCCCcCHHHHHHHHHHHhcCHHHH---HHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHh
Q 012314 398 EGGIITREEIKNKVDQVLGNQDFK---ARALELKEKAMSSVREGGSSYKTFQNFLQWVKTN 455 (466)
Q Consensus 398 ~~~~~~~~~l~~~i~~ll~~~~~r---~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~ 455 (466)
+.+|+++|.++|+++|+|++|| +|+++|++..++++.+||+|.+++..++|++.+.
T Consensus 389 --~~~t~~~l~~ai~~vL~d~~y~~~~~r~~~l~~~~~~a~~~~gss~~~~~~~~e~v~r~ 447 (450)
T d2c1xa1 389 --GVFTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVSKP 447 (450)
T ss_dssp --GSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHTSC
T ss_pred --CCcCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhhh
Confidence 8899999999999999999776 6888888888889999999999999999998653
|
| >d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: (Iso)flavonoid glycosyltransferase species: Medicago truncatula [TaxId: 3880]
Probab=100.00 E-value=4.8e-55 Score=433.65 Aligned_cols=446 Identities=33% Similarity=0.663 Sum_probs=326.4
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcC-CCCCCCeEEEecCCCCCCCC----CCcc
Q 012314 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGK-NYLGEQIHLVSIPDGMEPWE----DRND 77 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~----~~~~ 77 (466)
|.||+++|+|++||++|+++||++|++|||+|||++++.+...+.+.+... ......+++..++++.+... ....
T Consensus 1 ~~hvl~~p~p~~gH~~P~~~lA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (473)
T d2pq6a1 1 KPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIPDGLTPMEGDGDVSQD 80 (473)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEECCCCC---------CC
T ss_pred CCEEEEECchhhhHHHHHHHHHHHHHHCCCeEEEEeCcchHhHHhhccCcccccCCCCcceeecCCCCcccccccchhhh
Confidence 579999999999999999999999999999999999988877776654222 22345677888877665442 3345
Q ss_pred HHHHHHHHHHhccHHHHHHHHHHhcC-CCCCccEEEeCCCchhHHHHHHHcCCceEEeccchhHHHHHHhhcccccccCc
Q 012314 78 LGKLIEKCLQVMPGKLEELIEEINSR-EDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGI 156 (466)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~ll~~l~~~-~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~ 156 (466)
...+++.+...+...+.+....+... ...++|++|.|....++..+|+++++|++.+++..+.......+.+.......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~a~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (473)
T d2pq6a1 81 VPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVERGI 160 (473)
T ss_dssp HHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeEEEecCcchhhHHHHHHhCCCceeeccccchhhhhhhcccccccccC
Confidence 55666666555555555555544332 12678999999999999999999999999998888776666655443333222
Q ss_pred cCCCCC-----CCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHHHhh--
Q 012314 157 IDSHGT-----PMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTT-- 229 (466)
Q Consensus 157 ~~~~~~-----~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~~~~-- 229 (466)
.+.... ........++|++......++. .+.............+....+.....+..+.+++.+.+......
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (473)
T d2pq6a1 161 IPFKDESYLTNGCLETKVDWIPGLKNFRLKDIV-DFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESDVINALS 239 (473)
T ss_dssp SSCSSGGGGTSSGGGCBCCSSTTCCSCBGGGSC-GGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESSCGGGGHHHHHHHH
T ss_pred CCccccccccccccccccccCCCccccchhhhh-hhhhhcchhHHHHHHHHHHHHHHHhhhcccccchhhhhHhHHHHHH
Confidence 211100 1111223345555555555555 44445555566777777777788888999999988877653332
Q ss_pred --cCCcceeccccCCCCCC-------CCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhCCCC
Q 012314 230 --FPELLPIGPLLASNRLG-------NTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRP 300 (466)
Q Consensus 230 --~p~v~~VGpl~~~~~~~-------~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~ 300 (466)
.+...+.++........ .........+.+...|+.....+.++|+++||......+....++.++++++.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~gs~~~~~~~~~~~~~~~~~~~~~~ 319 (473)
T d2pq6a1 240 STIPSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPEQLLEFAWGLANCKKS 319 (473)
T ss_dssp TTCTTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCCHHHHHHHHHHHHHTTCE
T ss_pred hcCCcccccCCccccCCCCCCccccccCCcccccccHHHHHHhhhcCCCceeeeccCccccccHHHHHHHHHHHHhcCCe
Confidence 23434333332111100 000111233445667888777788999999999888999999999999999999
Q ss_pred EEEEEcCCCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCcccceeccCCchhhhhhhcCcceeecccccchhhh
Q 012314 301 FLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLN 380 (466)
Q Consensus 301 ~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~~ 380 (466)
++|+++..........+++++....++|+++.+|+||.+||.||+|++||||||+||++||+++|||||++|+++||+.|
T Consensus 320 ~i~~~~~~~~~~~~~~~~~~~~~~~~~Nv~~~~~~Pq~~lL~hp~~~~fItHGG~~s~~Eal~~GVP~lv~P~~~DQ~~n 399 (473)
T d2pq6a1 320 FLWIIRPDLVIGGSVIFSSEFTNEIADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQPTD 399 (473)
T ss_dssp EEEECCGGGSTTTGGGSCHHHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHH
T ss_pred EEEEEccCCcccccccCcccchhhccCceEEeeeCCHHHHhcCCcCcEEEecCCccHHHHHHHcCCCEEeccchhhhHHH
Confidence 99999766444444566777777788999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCHH---HHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Q 012314 381 ERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQD---FKARALELKEKAMSSVREGGSSYKTFQNFLQWVK 453 (466)
Q Consensus 381 a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~---~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~ 453 (466)
|+||++++|+|+.++ ..+|.++|+++|+++|+|++ ||+||++|++++++++++||+|++.++++++++.
T Consensus 400 a~rv~~~~G~G~~l~----~~~t~~~l~~ai~~vl~d~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~~~~~i~~~~ 471 (473)
T d2pq6a1 400 CRFICNEWEIGMEID----TNVKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKVIKDVL 471 (473)
T ss_dssp HHHHHHTSCCEEECC----SSCCHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHcCeEEeeC----CCcCHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Confidence 999965369999996 46999999999999999975 9999999999999999999999999999999864
|
| >d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Triterpene UDP-glucosyl transferase UGT71G1 species: Medicago truncatula [TaxId: 3880]
Probab=100.00 E-value=1.6e-53 Score=421.39 Aligned_cols=436 Identities=24% Similarity=0.400 Sum_probs=320.4
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEE--EeCCcchH-HHHHhhhcCCCCCCCeEEEecCCCCCCC-CCCccH
Q 012314 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTF--VNTDYNHK-RVVESLQGKNYLGEQIHLVSIPDGMEPW-EDRNDL 78 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 78 (466)
+.||+|+|+|++||++|+++||++|++|||+||+ ++++.... .+...+.........+++..++++.+.. ......
T Consensus 7 ~~hil~~p~P~~GH~~P~l~lA~~L~~rGH~V~vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (461)
T d2acva1 7 NSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQPQIQLIDLPEVEPPPQELLKSP 86 (461)
T ss_dssp CEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHHCSCTTEEEEECCCCCCCCGGGGGSH
T ss_pred CCeEEEecChhhhHHHHHHHHHHHHHHCCCCeEEEEEeCCccchhhhhhcccccccCCCCeeEEECCCCCCchhhhhhcH
Confidence 3599999999999999999999999999998764 55543222 2222222222344678999998766555 345566
Q ss_pred HHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEEeccchhHHHHHHhhcccccccCccC
Q 012314 79 GKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIID 158 (466)
Q Consensus 79 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~ 158 (466)
..++..+.+.+...++++++.+.. .++|++|.|.+..++..+|+.+++|++.+++..........+++........
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~d~vi~d~~~~~~~~~a~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~- 162 (461)
T d2acva1 87 EFYILTFLESLIPHVKATIKTILS---NKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIEEVF- 162 (461)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHCC---TTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSCTTCCC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcc---CCCeEEEEeccchHHHHHHHHhCCCeEEEecccchhhHHhhccccccccccc-
Confidence 777778888888889999999877 7899999999999999999999999999999887766666555433221111
Q ss_pred CCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHH-------HhhcC
Q 012314 159 SHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEA-------FTTFP 231 (466)
Q Consensus 159 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~-------~~~~p 231 (466)
...........+++........+...+... .......+.+........+.++.+++..++... .+..+
T Consensus 163 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (461)
T d2acva1 163 --DDSDRDHQLLNIPGISNQVPSNVLPDACFN---KDGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDHDEKIP 237 (461)
T ss_dssp --CCSSGGGCEECCTTCSSCEEGGGSCHHHHC---TTTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHHHHHCTTSC
T ss_pred --cccccccccccccccccchhhhhhhhhhhc---cchhHHHHHHHHHhhhccccccccccccccchhhhhhhhcccCCC
Confidence 111222222233333222222221111111 112233334444556777888888877766432 23457
Q ss_pred CcceeccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccc-cccCHHHHHHHHHHHHhCCCCEEEEEcCCCC
Q 012314 232 ELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSF-TILDQVQFQELALGLELCKRPFLWVVRPDIT 310 (466)
Q Consensus 232 ~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~-~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~ 310 (466)
+++++||.......... ....+.++++..|++..+...++++++|+. ...+.+.+..++.+++..+++++|.....
T Consensus 238 ~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 314 (461)
T d2acva1 238 PIYAVGPLLDLKGQPNP-KLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLWSNSAE-- 314 (461)
T ss_dssp CEEECCCCCCSSCCCBT-TBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEEECCCC--
T ss_pred CceeeccccccCCccCC-CccccCcHHHHHHHhhCCccceeeeeccccccCCCHHHHHHHHHHHHhcCccEEEEeecc--
Confidence 88999988876543211 112334556778998887778899998877 45678899999999999999999998765
Q ss_pred CCCCCCCchhHHH--HhcCCceeecccchhhhhcCCCcccceeccCCchhhhhhhcCcceeecccccchhhhHHHHHHhh
Q 012314 311 TDANDRYPEGFQE--RVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFW 388 (466)
Q Consensus 311 ~~~~~~~~~~~~~--~~~~n~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~ 388 (466)
....++++.+ ..+.|+.++.|.||.++|.|++|++||||||+||++||+++|||||++|+++||+.||+|+++++
T Consensus 315 ---~~~~~~~~~~~~~~~~n~~v~~~~pq~~~l~~p~~~~fItHGG~gs~~eAl~~GVP~l~~P~~~DQ~~nA~rlve~~ 391 (461)
T d2acva1 315 ---KKVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEW 391 (461)
T ss_dssp ---GGGSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTS
T ss_pred ---cccCCccchhhhccCCCeEEEecCCHHHHHhcccCCEEEecCCccHHHHHHHcCCCEEeCCcccchHHHHHHHHHHh
Confidence 1233444432 35799999999999999999999999999999999999999999999999999999999974437
Q ss_pred hceeEeecCC---CCCcCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Q 012314 389 KVGLKFDRDE---GGIITREEIKNKVDQVLGN-QDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVK 453 (466)
Q Consensus 389 G~G~~l~~~~---~~~~~~~~l~~~i~~ll~~-~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~ 453 (466)
|+|+.++.++ ...+|+++|+++|+++|++ ++||+||++|++++++++++||+|.+++.+|++++.
T Consensus 392 G~G~~l~~~~~~~~~~~t~~~l~~a~~~vl~~d~~~r~~a~~l~~~~r~a~~~gg~s~~~~~~~~~~~~ 460 (461)
T d2acva1 392 GVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKDSIVHKKVQEMKEMSRNAVVDGGSSLISVGKLIDDIT 460 (461)
T ss_dssp CCEEESCSSCCTTCCCCCHHHHHHHHHHHTCTTCTHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHH
T ss_pred CceEEeeccccccCCccCHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHhc
Confidence 9999997632 2238999999999999975 569999999999999999999999999999999885
|
| >d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Hydroquinone glucosyltransferase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=1.7e-52 Score=415.11 Aligned_cols=440 Identities=28% Similarity=0.464 Sum_probs=317.2
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHh-CCCEEEEEeCCcchHHHH-HhhhcCCCCCCCeEEEecCCCCC-CCCCCccHHH
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAK-HGFRVTFVNTDYNHKRVV-ESLQGKNYLGEQIHLVSIPDGME-PWEDRNDLGK 80 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~-rGh~Vt~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 80 (466)
.||+++|+|++||++|+++||++|++ |||+|||++++.+..... ..+.. .....+....++.... ......+...
T Consensus 2 ~hil~~p~p~~GH~~P~l~La~~L~~~rGH~Vt~v~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (471)
T d2vcha1 2 PHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLD--SLPSSISSVFLPPVDLTDLSSSTRIES 79 (471)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC---CCTTEEEEECCCCCCTTSCTTCCHHH
T ss_pred CEEEEECchhHhHHHHHHHHHHHHHHccCCEEEEEeCCCcchhhhhhcccc--cCCCCcceeecCcccccccccccchHH
Confidence 59999999999999999999999975 899999999875443322 22211 1224566666653322 2234556677
Q ss_pred HHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEEeccchhHHHHHHhhcccccccCccCCC
Q 012314 81 LIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSH 160 (466)
Q Consensus 81 ~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 160 (466)
.+..+...+...+++..+.+.... .++|++|.|....++..+++.+|+|++.+++.++.....+.+.+........
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~~~~~~~~~a~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 155 (471)
T d2vcha1 80 RISLTVTRSNPELRKVFDSFVEGG-RLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSC--- 155 (471)
T ss_dssp HHHHHHHTTHHHHHHHHHHHHHTT-CCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHHHCCS---
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcC-CCCcEEEEeccchHHHHHHHHhCCCcccccccchhhHHHhhcCcccccccCc---
Confidence 777777888888888877766554 7799999999999999999999999999988877666665554432211100
Q ss_pred CCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHHHhh-------cCCc
Q 012314 161 GTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTT-------FPEL 233 (466)
Q Consensus 161 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~~~~-------~p~v 233 (466)
..........+++.......... .. ......................+..+.+.+...+...... .+.+
T Consensus 156 -~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (471)
T d2vcha1 156 -EFRELTEPLMLPGCVPVAGKDFL-DP--AQDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPGLDKPPV 231 (471)
T ss_dssp -CGGGCSSCBCCTTCCCBCGGGSC-GG--GSCTTSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHHSCCTTCCCE
T ss_pred -ccccccccccccccccccccccc-cc--ccccchHHHHHHHHHHHhhcccccccchhHHHHHHHHHhhcccccCCCCCc
Confidence 00011111222332222222211 11 1222233444545555566777777877777665533322 2345
Q ss_pred ceeccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCC-
Q 012314 234 LPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTD- 312 (466)
Q Consensus 234 ~~VGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~- 312 (466)
.+++++....... ...+...++..|++.....+++|+++|+........+..+..++...+.+++|.+.......
T Consensus 232 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (471)
T d2vcha1 232 YPVGPLVNIGKQE----AKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRSPSGIAN 307 (471)
T ss_dssp EECCCCCCCSCSC----C-----CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEECCCCSSTT
T ss_pred cCcccccccCccc----cccccchhHHHHHHhcCCccccccccccccCCCHHHHHHHHHHHHhhcCCeEEEecccccccc
Confidence 5555555433221 12345667889999988889999999999888888899999999999999999987542111
Q ss_pred -----------CCCCCchhHHHH-hcCCceeecccchhhhhcCCCcccceeccCCchhhhhhhcCcceeecccccchhhh
Q 012314 313 -----------ANDRYPEGFQER-VAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLN 380 (466)
Q Consensus 313 -----------~~~~~~~~~~~~-~~~n~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~~ 380 (466)
....+|+++... .++|+++.+|+||.+||.||+|++||||||+||++||+++|||||++|+++||+.|
T Consensus 308 ~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~w~Pq~~lL~hp~~~~fVtHGG~gS~~EAl~~GvP~v~~P~~~DQ~~n 387 (471)
T d2vcha1 308 SSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMN 387 (471)
T ss_dssp TTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHH
T ss_pred ccccccccccchhhhCCchhhhhccCCCeeecccCCHHHHhcCccCCEEEecCCccHHHHHHHcCCCEEEcccccccHHH
Confidence 123445555543 35889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCHH---HHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhcc
Q 012314 381 ERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQD---FKARALELKEKAMSSVREGGSSYKTFQNFLQWVKTNAL 457 (466)
Q Consensus 381 a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~---~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~~~ 457 (466)
|+|+++++|+|+.+..++...+|+++|+++|+++|+|++ ||+||++++++++.|++|||+|.++|+++|+.|++...
T Consensus 388 A~rv~e~lG~Gv~l~~~~~~~~t~~~l~~ai~~vl~~~~~~~~r~ra~~l~e~~~~a~~~gG~s~~~~~~~~~~~~~~~~ 467 (471)
T d2vcha1 388 AVLLSEDIRAALRPRAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVALKWKAHKK 467 (471)
T ss_dssp HHHHHHTTCCEECCCCCTTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHheeEEEEecCCCCcCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhhH
Confidence 999966579999998644456999999999999999864 99999999999999999999999999999999987643
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Probab=100.00 E-value=3.2e-44 Score=347.92 Aligned_cols=368 Identities=13% Similarity=0.058 Sum_probs=247.2
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCC----CCCCCccHH
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGME----PWEDRNDLG 79 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 79 (466)
|||+|+++|+.||++|+++||++|++|||+|||++++...+.+.+. +++++.++.... .........
T Consensus 1 mrIl~~~~gt~Ghv~P~l~lA~~L~~rGh~V~~~t~~~~~~~v~~~---------g~~~~~~~~~~~~~~~~~~~~~~~~ 71 (401)
T d1rrva_ 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAEV---------GVPHVPVGLPQHMMLQEGMPPPPPE 71 (401)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH---------TCCEEECSCCGGGCCCTTSCCCCHH
T ss_pred CeEEEECCCChhHHHHHHHHHHHHHHCCCEEEEEEChhhHHHHHHC---------CCeEEEcCCcHHhhhccccccccHH
Confidence 6899999999999999999999999999999999999998888876 688887753211 111122222
Q ss_pred HHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCch-hHHHHHHHcCCceEEeccchhHHHHHHhhcccccccCccC
Q 012314 80 KLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIG-WSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIID 158 (466)
Q Consensus 80 ~~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~-~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~ 158 (466)
...... ....+.+.+.++.+... .++|++|.|.... ++..+|+.+|+|++...+.+...... .
T Consensus 72 ~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~~a~~~~~p~~~~~~~~~~~~~~-----------~-- 135 (401)
T d1rrva_ 72 EEQRLA-AMTVEMQFDAVPGAAEG--CAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLASP-----------H-- 135 (401)
T ss_dssp HHHHHH-HHHHHHHHHHHHHHTTT--CSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSCCS-----------S--
T ss_pred HHHHHH-HHHHHHHHHHHHHHHhc--CCCeEEEEcCchhhHHHHHHHHhCCCcccccccchhhccc-----------c--
Confidence 222222 22222233333332221 7899999987544 78889999999999877655430000 0
Q ss_pred CCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhh-----------hccccEEEEcChhhccHHHH
Q 012314 159 SHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRA-----------MIAVNFHFCNSTYELESEAF 227 (466)
Q Consensus 159 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~vl~~s~~~le~~~~ 227 (466)
.+... ..+..+........+... .................. ........++..+.+.. .
T Consensus 136 ---~~~~~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 205 (401)
T d1rrva_ 136 ---LPPAY----DEPTTPGVTDIRVLWEER-AARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGERPLLAADPVLAP--L 205 (401)
T ss_dssp ---SCCCB----CSCCCTTCCCHHHHHHHH-HHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCSSCEECSCTTTSC--C
T ss_pred ---ccccc----ccccccccchhhhhHHHH-HHHHHhhhHHHHHHHHHHhCCcccchhhhhccccchhhcchhhhcc--c
Confidence 00000 000000000000000000 000000011111111111 12233344455554443 3
Q ss_pred hhcCCcceeccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccC-HHHHHHHHHHHHhCCCCEEEEEc
Q 012314 228 TTFPELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILD-QVQFQELALGLELCKRPFLWVVR 306 (466)
Q Consensus 228 ~~~p~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~-~~~~~~~~~a~~~~~~~~i~~~~ 306 (466)
+..+++.++|+++.++.. +.+.++..|++... ++||++|||..... .+..+.++.++...+..++|..+
T Consensus 206 ~~~~~~~~~g~~~~~~~~--------~~~~~~~~~l~~~~--~~v~~~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (401)
T d1rrva_ 206 QPDVDAVQTGAWLLSDER--------PLPPELEAFLAAGS--PPVHIGFGSSSGRGIADAAKVAVEAIRAQGRRVILSRG 275 (401)
T ss_dssp CSSCCCEECCCCCCCCCC--------CCCHHHHHHHHSSS--CCEEECCTTCCSHHHHHHHHHHHHHHHHTTCCEEEECT
T ss_pred CCCCCeEEECCCcccccc--------cCCHHHHHhhccCC--CeEEEECCccccCCHHHHHHHHHHHHhhcCCeEEEecc
Confidence 456688999999887653 46667889998754 49999999985443 45677788999999999888876
Q ss_pred CCCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCcccceeccCCchhhhhhhcCcceeecccccchhhhHHHHHH
Q 012314 307 PDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICD 386 (466)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~ 386 (466)
... ..... .++|+++.+|+||.++|.|+++ ||||||+||++||+++|||+|++|+.+||+.||+++++
T Consensus 276 ~~~-----~~~~~-----~~~~v~~~~~~p~~~ll~~~~~--~I~hgG~~t~~Eal~~GvP~l~~P~~~DQ~~na~~v~~ 343 (401)
T d1rrva_ 276 WTE-----LVLPD-----DRDDCFAIDEVNFQALFRRVAA--VIHHGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAA 343 (401)
T ss_dssp TTT-----CCCSC-----CCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHH
T ss_pred ccc-----ccccc-----CCCCEEEEeccCcHHHhhhccE--EEecCCchHHHHHHHhCCCEEEecccccHHHHHHHHHH
Confidence 541 11111 3789999999999999977555 99999999999999999999999999999999999999
Q ss_pred hhhceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 012314 387 FWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALELKEKAMS 433 (466)
Q Consensus 387 ~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~~ 433 (466)
+|+|+.++. .+++++.|+++|+++| +++||++|++++++++.
T Consensus 344 -~G~g~~l~~---~~~~~~~L~~ai~~vl-~~~~r~~a~~~~~~~~~ 385 (401)
T d1rrva_ 344 -LGIGVAHDG---PTPTFESLSAALTTVL-APETRARAEAVAGMVLT 385 (401)
T ss_dssp -HTSEEECSS---SCCCHHHHHHHHHHHT-SHHHHHHHHHHTTTCCC
T ss_pred -CCCEEEcCc---CCCCHHHHHHHHHHHh-CHHHHHHHHHHHHHHhh
Confidence 699999985 7799999999999999 57899999999988753
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=100.00 E-value=3.3e-43 Score=340.35 Aligned_cols=363 Identities=13% Similarity=0.110 Sum_probs=246.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCC--C-CCccHHH
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPW--E-DRNDLGK 80 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~ 80 (466)
|||+|+++|++||++|+++||++|++|||+|||++++...+.+.+. +++|+.++...... . .......
T Consensus 1 mkil~~~~gt~Gh~~P~lala~~L~~~Gh~V~~~~~~~~~~~v~~~---------g~~~~~i~~~~~~~~~~~~~~~~~~ 71 (401)
T d1iira_ 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAEV---------GVPHVPVGPSARAPIQRAKPLTAED 71 (401)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHT---------TCCEEECCC-------CCSCCCHHH
T ss_pred CEEEEECCCChhHHHHHHHHHHHHHHCCCEEEEEeCcchHHHHHHc---------CCeEEECCcchhhhhhccccchHHH
Confidence 6899999999999999999999999999999999999998888775 78998887543332 1 1122222
Q ss_pred HHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCch---hHHHHHHHcCCceEEeccchhHHHHHHhhcccccccCcc
Q 012314 81 LIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIG---WSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGII 157 (466)
Q Consensus 81 ~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~---~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~ 157 (466)
............++.+.+.. ..+|.++.+.+.. ++..++..+++|.+...+.+... ....
T Consensus 72 ~~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~-----------~~~~- 134 (401)
T d1iira_ 72 VRRFTTEAIATQFDEIPAAA-----EGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYV-----------PSPY- 134 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHHT-----TTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGS-----------CCSS-
T ss_pred HHHHHHHHHHHHHHHHHHHh-----hcCcceEEeecchhHHHHHHHHHHhcccccccccccccc-----------cccc-
Confidence 22222222222233333332 3456666665443 56678999999998876544420 0000
Q ss_pred CCCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHH----HH-----------HhhhccccEEEEcChhhc
Q 012314 158 DSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLE----RN-----------TRAMIAVNFHFCNSTYEL 222 (466)
Q Consensus 158 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-----------~~~~~~~~~vl~~s~~~l 222 (466)
.+.. ....+.. .........+ ..........+. .. .......+..++++.+.+
T Consensus 135 ----~~~~---~~~~~~~--~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (401)
T d1iira_ 135 ----YPPP---PLGEPST--QDTIDIPAQW---ERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTDHPWVAADPVL 202 (401)
T ss_dssp ----SCCC---C-----------CHHHHHH---HHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTTT
T ss_pred ----cccc---ccccccc--cchhcchhhh---hhhhhHHHHHHHHHHHHHHHHhcCccchhhhhhcccchhhhcccccc
Confidence 0000 0000000 0000000000 000000011111 10 011245677899999999
Q ss_pred cHHHHhhcCCcceeccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhCCCCEE
Q 012314 223 ESEAFTTFPELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRPFL 302 (466)
Q Consensus 223 e~~~~~~~p~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i 302 (466)
+++ .+..+..+.+|++...... +.+.....|+... +++||+++|+.. .+...++.++.+++..+..++
T Consensus 203 ~~~-~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~--~~~i~~~~~~~~-~~~~~~~~~~~al~~~~~~~~ 270 (401)
T d1iira_ 203 APL-QPTDLDAVQTGAWILPDER--------PLSPELAAFLDAG--PPPVYLGFGSLG-APADAVRVAIDAIRAHGRRVI 270 (401)
T ss_dssp SCC-CCCSSCCEECCCCCCCCCC--------CCCHHHHHHHHTS--SCCEEEECC----CCHHHHHHHHHHHHHTTCCEE
T ss_pred cCC-CCcccccccccCcccCccc--------ccCHHHHHhhccC--CCeEEEccCccc-cchHHHHHHHHHHHHcCCeEE
Confidence 877 7778888888887766543 3445556677664 458999999864 477889999999999999999
Q ss_pred EEEcCCCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCcccceeccCCchhhhhhhcCcceeecccccchhhhHH
Q 012314 303 WVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNER 382 (466)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~ 382 (466)
|..+... .... ..++|+++++|+||.++|.|+++ ||||||+||++||+++|||+|++|+.+||+.||+
T Consensus 271 ~~~~~~~------~~~~----~~~~nv~~~~~~p~~~~l~~~~~--~V~hgG~~t~~Eal~~GvP~v~~P~~~DQ~~na~ 338 (401)
T d1iira_ 271 LSRGWAD------LVLP----DDGADCFAIGEVNHQVLFGRVAA--VIHHGGAGTTHVAARAGAPQILLPQMADQPYYAG 338 (401)
T ss_dssp ECTTCTT------CCCS----SCGGGEEECSSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHH
T ss_pred EeccCCc------cccc----cCCCCEEEEeccCHHHHHhhcCE--EEecCCchHHHHHHHhCCCEEEccccccHHHHHH
Confidence 9876541 1111 13678899999999999988665 9999999999999999999999999999999999
Q ss_pred HHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 012314 383 YICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALELKEKAMS 433 (466)
Q Consensus 383 rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~~ 433 (466)
++++ +|+|+.++. .++|+++|+++|+++| +++|++||+++++.+++
T Consensus 339 ~l~~-~G~g~~l~~---~~~~~~~l~~ai~~~l-~~~~~~~a~~~~~~~~~ 384 (401)
T d1iira_ 339 RVAE-LGVGVAHDG---PIPTFDSLSAALATAL-TPETHARATAVAGTIRT 384 (401)
T ss_dssp HHHH-HTSEEECSS---SSCCHHHHHHHHHHHT-SHHHHHHHHHHHHHSCS
T ss_pred HHHH-CCCEEEcCc---CCCCHHHHHHHHHHHh-CHHHHHHHHHHHHHHHh
Confidence 9999 699999985 7899999999999999 56899999999999875
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=100.00 E-value=3.9e-43 Score=339.02 Aligned_cols=352 Identities=16% Similarity=0.149 Sum_probs=245.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCC--CCCccHHHH
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPW--EDRNDLGKL 81 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 81 (466)
|||+|.+.|+.||++|+++||++|++|||+|||++++...+.+.+. ++.++.++...... +........
T Consensus 1 mril~~~~gt~Ghi~P~laLA~~L~~rGh~V~~~~~~~~~~~v~~~---------g~~~~~~~~~~~~~~~~~~~~~~~~ 71 (391)
T d1pn3a_ 1 MRVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAEV---------GVPMVPVGRAVRAGAREPGELPPGA 71 (391)
T ss_dssp CEEEEEEESSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH---------TCCEEECSSCSSGGGSCTTCCCTTC
T ss_pred CEEEEEcCCChhHHHHHHHHHHHHHHCCCEEEEEEChhhHhHHHHC---------CCeEEECCccHHHHhhChhhhhHHH
Confidence 6899999999999999999999999999999999999998888876 68888887443321 001000111
Q ss_pred HHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCch---hHHHHHHHcCCceEEeccchhHHHHHHhhcccccccCccC
Q 012314 82 IEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIG---WSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIID 158 (466)
Q Consensus 82 ~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~---~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~ 158 (466)
.+.+.......++++.+.+ .+||++|+|.+.+ ++..+|+.+++|++.+...+...
T Consensus 72 ~~~~~~~~~~~~~~l~~~~-----~~~D~vi~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~----------------- 129 (391)
T d1pn3a_ 72 AEVVTEVVAEWFDKVPAAI-----EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHL----------------- 129 (391)
T ss_dssp GGGHHHHHHHHHHHHHHHH-----TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGS-----------------
T ss_pred HHHHHHHHHHHHHHHHHHh-----cCCCeEEEcccCchHHHHHHHHHHcCCceEEeecccccc-----------------
Confidence 1111111222333444433 4699999998755 45668999999999887655420
Q ss_pred CCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHH-----------hhhccccEEEEcChhhccHHHH
Q 012314 159 SHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNT-----------RAMIAVNFHFCNSTYELESEAF 227 (466)
Q Consensus 159 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~vl~~s~~~le~~~~ 227 (466)
+....... .... ... ........+.... ......+..++...+.++.. .
T Consensus 130 ----~~~~~~~~----------~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~ 189 (391)
T d1pn3a_ 130 ----PSEQSQAE----------RDMY-NQG----ADRLFGDAVNSHRASIGLPPVEHLYDYGYTDQPWLAADPVLSPL-R 189 (391)
T ss_dssp ----GGGSCHHH----------HHHH-HHH----HHHHTHHHHHHHHHTTSCCCCCCHHHHHHCSSCEECSCTTTSCC-C
T ss_pred ----ccccccch----------hhHH-HHH----HHHHHHHHHHHHHHHhcCcccccccccccccceeeccchhhhcc-C
Confidence 00000000 0000 000 0000000000000 01123344566666766655 6
Q ss_pred hhcCCcceeccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccC-HHHHHHHHHHHHhCCCCEEEEEc
Q 012314 228 TTFPELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILD-QVQFQELALGLELCKRPFLWVVR 306 (466)
Q Consensus 228 ~~~p~v~~VGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~-~~~~~~~~~a~~~~~~~~i~~~~ 306 (466)
+..++.+++|++...... +.+.++..|....+ +.||+++|+..... ......++.++...+.+++|...
T Consensus 190 ~~~~~~~~~g~~~~~~~~--------~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 259 (391)
T d1pn3a_ 190 PTDLGTVQTGAWILPDER--------PLSAELEAFLAAGS--TPVYVGFGSSSRPATADAAKMAIKAVRASGRRIVLSRG 259 (391)
T ss_dssp TTCCSCCBCCCCCCCCCC--------CCCHHHHHHTTSSS--CCEEEECTTCCSTHHHHHHHHHHHHHHHTTCCEEEECT
T ss_pred CCCCCeeeecCcccCccc--------cCCHHHhhhhccCC--CeEEEeccccccccHHHHHHHHHHHHHhcCCEEEEecc
Confidence 677889999998877543 35566677777653 48999999874433 45677788999999999888775
Q ss_pred CCCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCcccceeccCCchhhhhhhcCcceeecccccc----hhhhHH
Q 012314 307 PDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGD----QFLNER 382 (466)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~D----Q~~~a~ 382 (466)
... ....+ .++|+.+.+|+||.++|.|+++ ||||||+||++||+++|||+|++|+.+| |+.||+
T Consensus 260 ~~~-----~~~~~-----~~~~v~i~~~~p~~~ll~~a~~--~v~hgG~~t~~Eal~~G~P~v~~P~~~d~~~eQ~~nA~ 327 (391)
T d1pn3a_ 260 WAD-----LVLPD-----DGADCFVVGEVNLQELFGRVAA--AIHHDSAGTTLLAMRAGIPQIVVRRVVDNVVEQAYHAD 327 (391)
T ss_dssp TTT-----CCCSS-----CCTTCCEESSCCHHHHHTTSSC--EEEESCHHHHHHHHHHTCCEEEECSSCCBTTBCCHHHH
T ss_pred ccc-----ccccc-----CCCCEEEecccCHHHHHhhccE--EEecCchHHHHHHHHhCCcEEEeccccCCcchHHHHHH
Confidence 441 11112 3688999999999999988766 9999999999999999999999999988 999999
Q ss_pred HHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 012314 383 YICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALELKEKAMS 433 (466)
Q Consensus 383 rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~~ 433 (466)
++++ +|+|+.++. ..+|+++|+++|+++|+ ++||+||+++++.+++
T Consensus 328 ~l~~-~G~g~~l~~---~~~~~~~l~~~i~~~l~-~~~r~~a~~~a~~~~~ 373 (391)
T d1pn3a_ 328 RVAE-LGVGVAVDG---PVPTIDSLSAALDTALA-PEIRARATTVADTIRA 373 (391)
T ss_dssp HHHH-HTSEEEECC---SSCCHHHHHHHHHHHTS-TTHHHHHHHHGGGSCS
T ss_pred HHHH-CCCEEEcCc---CCCCHHHHHHHHHHHhC-HHHHHHHHHHHHHHHh
Confidence 9999 699999985 78999999999999995 6799999999888753
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=99.92 E-value=3.1e-24 Score=202.70 Aligned_cols=336 Identities=15% Similarity=0.137 Sum_probs=186.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcc-h-HHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCccHHHH
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYN-H-KRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKL 81 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (466)
+||++++.+..||+.|+++|+++|.++||+|+|+++... . +.+.+ .++++..++..--. .......
T Consensus 1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~~~~~~~~~~~---------~~~~~~~~~~~~~~---~~~~~~~ 68 (351)
T d1f0ka_ 1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPK---------HGIEIDFIRISGLR---GKGIKAL 68 (351)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGG---------GTCEEEECCCCCCT---TCCHHHH
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeCCcchhhcccc---------cCCcEEEEECCCcC---CCCHHHH
Confidence 479998865449999999999999999999999987543 2 22333 35777666532111 1111111
Q ss_pred HHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCC--CchhHHHHHHHcCCceEEeccchhHHHHHHhhcccccccCccCC
Q 012314 82 IEKCLQVMPGKLEELIEEINSREDEKIDCFIADG--NIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDS 159 (466)
Q Consensus 82 ~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~--~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~ 159 (466)
...... ....+.+....+.+ .++|.++... ....+...|..+++|++.+...........
T Consensus 69 ~~~~~~-~~~~~~~~~~i~~~---~~~~~~~~~~~~~~~~~~~~a~~~~ip~~~~~~~~~~~~~~~-------------- 130 (351)
T d1f0ka_ 69 IAAPLR-IFNAWRQARAIMKA---YKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNGIAGLTNK-------------- 130 (351)
T ss_dssp HTCHHH-HHHHHHHHHHHHHH---HCCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSSSCCHHHH--------------
T ss_pred HHHHHH-HHHhHHHHHHHhhc---cccceeeecccchhhhhhhhhhhcccceeecccccccchhHH--------------
Confidence 111111 11122222233333 7889988764 344677789999999987542211000000
Q ss_pred CCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHHHhhcCCcceeccc
Q 012314 160 HGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTFPELLPIGPL 239 (466)
Q Consensus 160 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~~~~~p~v~~VGpl 239 (466)
. .....+.+.... .........+|..
T Consensus 131 ----------------------------------------~------~~~~~~~~~~~~--------~~~~~~~~~~~~~ 156 (351)
T d1f0ka_ 131 ----------------------------------------W------LAKIATKVMQAF--------PGAFPNAEVVGNP 156 (351)
T ss_dssp ----------------------------------------H------HTTTCSEEEESS--------TTSSSSCEECCCC
T ss_pred ----------------------------------------H------hhhhcceeeccc--------cccccceeEEcCC
Confidence 0 000111111111 0111122233322
Q ss_pred cCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHHHHHHHHHHHHhCCC-CEEEEEcCCCCCCCCCCCc
Q 012314 240 LASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKR-PFLWVVRPDITTDANDRYP 318 (466)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~-~~i~~~~~~~~~~~~~~~~ 318 (466)
...... ..+... ...........+++..||.+.. .....+.+.+..+.. ...+..... ....
T Consensus 157 ~~~~~~--------~~~~~~-~~~~~~~~~~~i~~~~gs~g~~--~~~~~~~~~~~~l~~~~~~i~~~~~------~~~~ 219 (351)
T d1f0ka_ 157 VRTDVL--------ALPLPQ-QRLAGREGPVRVLVVGGSQGAR--ILNQTMPQVAAKLGDSVTIWHQSGK------GSQQ 219 (351)
T ss_dssp CCHHHH--------TSCCHH-HHHTTCCSSEEEEEECTTTCCH--HHHHHHHHHHHHHGGGEEEEEECCT------TCHH
T ss_pred cccccc--------cchhHH-hhhhcccCCcccccccccchhh--hhHHHHHHhhhhhcccceeeeeccc------cchh
Confidence 211100 000011 1112223345777778876432 222333333433333 233333332 1111
Q ss_pred h---hHHHHhcCCceeecccchh-hhhcCCCcccceeccCCchhhhhhhcCcceeecccc---cchhhhHHHHHHhhhce
Q 012314 319 E---GFQERVAARGQMISWAPQL-RVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYF---GDQFLNERYICDFWKVG 391 (466)
Q Consensus 319 ~---~~~~~~~~n~~~~~~~p~~-~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~---~DQ~~~a~rv~~~~G~G 391 (466)
. ...+....++.+.+|+++. ++|..+++ +|||||.+|++|++++|+|+|++|+. .||..||.++++ +|+|
T Consensus 220 ~~~~~~~~~~~~~~~v~~f~~~~~~lm~~adl--~It~~G~~T~~Eal~~g~P~I~iP~~~~~~~Q~~NA~~l~~-~G~~ 296 (351)
T d1f0ka_ 220 SVEQAYAEAGQPQHKVTEFIDDMAAAYAWADV--VVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEK-AGAA 296 (351)
T ss_dssp HHHHHHHHTTCTTSEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHH-TTSE
T ss_pred hhhhhhcccccccceeeeehhhHHHHHHhCch--hhccccchHHHHHHHhCCceeeeecccCCchHHHHHHHHHH-CCCE
Confidence 1 1112235678888998875 58966666 99999999999999999999999975 489999999999 6999
Q ss_pred eEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Q 012314 392 LKFDRDEGGIITREEIKNKVDQVLGNQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVK 453 (466)
Q Consensus 392 ~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~ 453 (466)
+.++. .+++.+.|.++|.++ ++ ++..+|++.+++- . ...+++.|.+.++.+.
T Consensus 297 ~~~~~---~~~~~e~l~~~l~~l--~~---~~~~~~~~~~~~~-~-~~~~a~~i~~~i~~l~ 348 (351)
T d1f0ka_ 297 KIIEQ---PQLSVDAVANTLAGW--SR---ETLLTMAERARAA-S-IPDATERVANEVSRVA 348 (351)
T ss_dssp EECCG---GGCCHHHHHHHHHTC--CH---HHHHHHHHHHHHT-C-CTTHHHHHHHHHHHHH
T ss_pred EEech---hhCCHHHHHHHHHhh--CH---HHHHHHHHHHHcc-C-CccHHHHHHHHHHHHH
Confidence 99974 788999999999886 33 2344555555542 1 1233555555555544
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Probab=99.12 E-value=4.2e-08 Score=90.83 Aligned_cols=145 Identities=15% Similarity=0.214 Sum_probs=91.0
Q ss_pred CeEEEEEeccccccCHHHHHHHHHHHHhCC-----CCEEEEEcCCCCCCCCCCCchhHHHHh--cCCceeecccch-hhh
Q 012314 269 SSVVYVSFGSFTILDQVQFQELALGLELCK-----RPFLWVVRPDITTDANDRYPEGFQERV--AARGQMISWAPQ-LRV 340 (466)
Q Consensus 269 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~-----~~~i~~~~~~~~~~~~~~~~~~~~~~~--~~n~~~~~~~p~-~~l 340 (466)
+..+++..|+.. +......+++|++.+. ..+++..+++ ....+ ..+.++. .+++.+..+..+ ..+
T Consensus 194 ~~~~i~~~gr~~--~~Kg~~~li~a~~~l~~~~~~~~~~ii~g~~----~~~~~-~~~~~~~~~~~~v~~~g~~~~~~~~ 266 (370)
T d2iw1a1 194 QQNLLLQVGSDF--GRKGVDRSIEALASLPESLRHNTLLFVVGQD----KPRKF-EALAEKLGVRSNVHFFSGRNDVSEL 266 (370)
T ss_dssp TCEEEEEECSCT--TTTTHHHHHHHHHTSCHHHHHTEEEEEESSS----CCHHH-HHHHHHHTCGGGEEEESCCSCHHHH
T ss_pred cceEEEEEeccc--cccchhhhcccccccccccccceeeeccccc----ccccc-ccccccccccccccccccccccccc
Confidence 447777788753 3345667777776553 2334444433 11111 1222222 355666666554 458
Q ss_pred hcCCCccccee--c--cCCchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhc
Q 012314 341 LNHPSIACFLS--H--CGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLG 416 (466)
Q Consensus 341 l~~~~~~~~i~--h--gG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~ 416 (466)
++.+++ +|. + |..+++.||+++|+|+|+. |.......+.+. +.|..+. +.-+.++|+++|.++++
T Consensus 267 ~~~adv--~v~ps~~E~~~~~~~EAma~G~PvI~s----~~~g~~e~i~~~-~~G~l~~----~~~d~~~la~~i~~ll~ 335 (370)
T d2iw1a1 267 MAAADL--LLHPAYQEAAGIVLLEAITAGLPVLTT----AVCGYAHYIADA-NCGTVIA----EPFSQEQLNEVLRKALT 335 (370)
T ss_dssp HHHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEE----TTSTTTHHHHHH-TCEEEEC----SSCCHHHHHHHHHHHHH
T ss_pred cccccc--cccccccccccceeeecccCCeeEEEe----CCCChHHHhcCC-CceEEEc----CCCCHHHHHHHHHHHHc
Confidence 888887 653 2 3447889999999999987 445566677774 7887763 34579999999999999
Q ss_pred CHHHHHHHHHHHHHH
Q 012314 417 NQDFKARALELKEKA 431 (466)
Q Consensus 417 ~~~~r~~a~~~~~~~ 431 (466)
|++.+++..+-+++.
T Consensus 336 d~~~~~~~~~~ar~~ 350 (370)
T d2iw1a1 336 QSPLRMAWAENARHY 350 (370)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHH
Confidence 988776554444333
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.03 E-value=3.3e-09 Score=101.32 Aligned_cols=112 Identities=10% Similarity=-0.035 Sum_probs=68.8
Q ss_pred CCceeecccchh---hhhcCCCcccceec----cCCchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCC
Q 012314 327 ARGQMISWAPQL---RVLNHPSIACFLSH----CGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEG 399 (466)
Q Consensus 327 ~n~~~~~~~p~~---~ll~~~~~~~~i~h----gG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~ 399 (466)
.+..+.+++|+. .++..+++ ++.- |...+++||+++|+|+|+... ......+.. +.|..+++
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~adi--~v~~s~~e~~~~~~~Eama~G~Pvi~~~~----g~~~e~i~~--~~G~~~~~--- 377 (437)
T d2bisa1 309 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDIITN--ETGILVKA--- 377 (437)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHTTTCEEEEESC----TTHHHHCCT--TTCEEECT---
T ss_pred cceeccccCcHHHHHHHHhhhcc--ccccccccccchHHHHHHHCCCCEEEeCC----CCcHHhEEC--CcEEEECC---
Confidence 344455778864 46766766 5533 334689999999999998743 344444443 77888853
Q ss_pred CCcCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHh
Q 012314 400 GIITREEIKNKVDQVLG-NQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVKTN 455 (466)
Q Consensus 400 ~~~~~~~l~~~i~~ll~-~~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~ 455 (466)
-++++|+++|.++|. |++.++++.+-+++..+ .-+-.+..+++++-+...
T Consensus 378 --~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~----~~s~~~~a~~~~~iY~~~ 428 (437)
T d2bisa1 378 --GDPGELANAILKALELSRSDLSKFRENCKKRAM----SFSWEKSAERYVKAYTGS 428 (437)
T ss_dssp --TCHHHHHHHHHHHHTTTTSCTHHHHHHHHHHHH----HSCHHHHHHHHHHHHHTC
T ss_pred --CCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH----hCCHHHHHHHHHHHHHHH
Confidence 479999999999986 44333322222222211 234455566666655554
|
| >d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Bacillus subtilis [TaxId: 1423]
Probab=98.89 E-value=1.8e-08 Score=93.76 Aligned_cols=352 Identities=12% Similarity=0.051 Sum_probs=178.1
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhC-CCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCccHHH
Q 012314 2 SRPRVLVMPAPAQGHVIPLLEFSQCLAKH-GFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGK 80 (466)
Q Consensus 2 ~~~~il~~~~~~~GH~~p~l~la~~L~~r-Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (466)
||+||++++ +++..+.-+.+|.++|.++ +.++.++.+..+.+........ -++.. .+.-.+... ......
T Consensus 1 ~k~Ki~~v~-GtR~e~~kl~pli~~l~~~~~~~~~li~tG~H~~~~~~~~~~-----~~i~~-~~~~~~~~~--~~~~~~ 71 (377)
T d1o6ca_ 1 KKLKVMTVF-GTRPEAIKMAPLVLELKKYPEIDSYVTVTAQHRQMLDQVLDA-----FHIKP-DFDLNIMKE--RQTLAE 71 (377)
T ss_dssp CCEEEEEEE-CSHHHHHHHHHHHHHGGGCTTEEEEEEECCSCGGGTHHHHHH-----TTCCC-SEECCCCCT--TCCHHH
T ss_pred CCceEEEEE-EchHhHHHHHHHHHHHHhCCCCCEEEEEeCCCHHHHHHHHhh-----cCCCC-ceeeecCCC--CCCHHH
Confidence 578988888 8899999999999999886 5789888887653322211110 01110 000111111 112222
Q ss_pred HHHHHHHhccHHHHHHHHHHhcCCCCCccEEE--eCCCch-hHHHHHHHcCCceEEeccchhHHHHHHhhcccccccCcc
Q 012314 81 LIEKCLQVMPGKLEELIEEINSREDEKIDCFI--ADGNIG-WSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGII 157 (466)
Q Consensus 81 ~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV--~D~~~~-~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~ 157 (466)
. .......+.+++.. .+||+|| .|.+.. +++.+|..++||++.+..+--+
T Consensus 72 ~----~~~~i~~~~~~~~~------~kpD~v~v~GDr~e~la~a~aa~~~~Ipi~HiegG~~s----------------- 124 (377)
T d1o6ca_ 72 I----TSNALVRLDELFKD------IKPDIVLVHGDTTTTFAGSLAAFYHQIAVGHVEAGLRT----------------- 124 (377)
T ss_dssp H----HHHHHHHHHHHHHH------HCCSEEEEETTCHHHHHHHHHHHHTTCEEEEESCCCCC-----------------
T ss_pred H----HHHHHHhhhhhhhh------cccceeEeeecccccchhhhhhhhccceEEEEeccccc-----------------
Confidence 1 23334445666666 6799876 455555 6788999999999986532221
Q ss_pred CCCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHHHhh--cCCcce
Q 012314 158 DSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTT--FPELLP 235 (466)
Q Consensus 158 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~~~~--~p~v~~ 235 (466)
... .-+ ++ ++..+.. ...-++..++.+....+.-...- ..+++.
T Consensus 125 ----~~~-------~~~--------~~---------de~~R~~------iskls~~hf~~t~~~~~~L~~~G~~~~~I~~ 170 (377)
T d1o6ca_ 125 ----GNK-------YSP--------FP---------EELNRQM------TGAIADLHFAPTGQAKDNLLKENKKADSIFV 170 (377)
T ss_dssp ----SCT-------TTT--------TT---------HHHHHHH------HHHHCSEEEESSHHHHHHHHHTTCCGGGEEE
T ss_pred ----ccc-------ccc--------Cc---------hhhhccc------cccceeEEeecchhhhhhhhhhccccceEee
Confidence 000 000 00 0111111 01234444555544333221110 124555
Q ss_pred eccccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccC---HHHHHHHHHHHHhCCC-CEEEEEcCCCCC
Q 012314 236 IGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILD---QVQFQELALGLELCKR-PFLWVVRPDITT 311 (466)
Q Consensus 236 VGpl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~---~~~~~~~~~a~~~~~~-~~i~~~~~~~~~ 311 (466)
||-...+.-.... . ..... ........++.+++++-...... ...+..+...+..... .+++.....
T Consensus 171 vG~~~~D~i~~~~-~--~~~~~---~~~~~~~~~~~ilvt~Hr~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--- 241 (377)
T d1o6ca_ 171 TGNTAIDALNTTV-R--DGYSH---PVLDQVGEDKMILLTAHRRENLGEPMENMFKAIRRIVGEFEDVQVVYPVHLN--- 241 (377)
T ss_dssp CCCHHHHHHHHHC-C--SSCCC---STTTTTTTSEEEEECC----------HHHHHHHHHHHHHCTTEEEEEC-------
T ss_pred ccchhHHHHHHHH-H--HHHhh---hhhhhccCCceEEEEeccccccccchHHHHHHHHhhcccccccccccccccc---
Confidence 5533221100000 0 00000 11111223557888775432222 2334445555554433 233222211
Q ss_pred CCCCCCchhHHH--HhcCCceeecccchh---hhhcCCCcccceeccCCchhhhhhhcCcceeecccccchhhhHHHHHH
Q 012314 312 DANDRYPEGFQE--RVAARGQMISWAPQL---RVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICD 386 (466)
Q Consensus 312 ~~~~~~~~~~~~--~~~~n~~~~~~~p~~---~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~ 386 (466)
........+ ...+|+.+++.+++. .+|.++++ +|+.+|.+ .-||-+.|+|+|.+--..|.+.- + +
T Consensus 242 ---~~~~~~~~~~~~~~~ni~~~~~l~~~~fl~llk~s~~--vIgnSss~-i~Ea~~lg~P~Inir~~tERqe~---~-~ 311 (377)
T d1o6ca_ 242 ---PVVREAAHKHFGDSDRVHLIEPLEVIDFHNFAAKSHF--ILTDSGGV-QEEAPSLGKPVLVLRDTTERPEG---V-E 311 (377)
T ss_dssp ---CHHHHHHHHC--CCSSEEECCCCCHHHHHHHHHHCSE--EEEC--CH-HHHGGGGTCCEEEECSCCC---C---T-T
T ss_pred ---cccchhhhhccccccceEeccccchHHHHHHHhhhhe--eecccchh-HHhhhhhhceEEEeCCCCcCcch---h-h
Confidence 111111111 124788888888765 47888887 99999987 66999999999999765555542 2 3
Q ss_pred hhhceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Q 012314 387 FWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWVK 453 (466)
Q Consensus 387 ~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~ 453 (466)
. |.-+.+. .+.++|.+++.+++.+..++++......-.- .|.++.+.++.++.++.
T Consensus 312 ~-g~nilv~------~~~~~I~~~i~~~l~~~~~~~~~~~~~npYG----dG~as~rI~~~L~~~~~ 367 (377)
T d1o6ca_ 312 A-GTLKLAG------TDEENIYQLAKQLLTDPDEYKKMSQASNPYG----DGEASRRIVEELLFHYG 367 (377)
T ss_dssp T-TSSEEEC------SCHHHHHHHHHHHHHCHHHHHHHHHCCCTTC----CSCHHHHHHHHHHHHTT
T ss_pred c-CeeEECC------CCHHHHHHHHHHHHhChHHHhhhccCCCCCC----CChHHHHHHHHHHHhhC
Confidence 2 6555553 3789999999999999888876655332222 24445555555554443
|
| >d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Thermus thermophilus [TaxId: 274]
Probab=98.84 E-value=5.6e-08 Score=90.25 Aligned_cols=325 Identities=11% Similarity=0.025 Sum_probs=167.3
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHh-CCCEEEEEeCCcchHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCccHHHHHH
Q 012314 5 RVLVMPAPAQGHVIPLLEFSQCLAK-HGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKLIE 83 (466)
Q Consensus 5 ~il~~~~~~~GH~~p~l~la~~L~~-rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (466)
||++++ +++..+.-+..|.++|.+ .+.++.++.+..+.+...+.... .+++- +..+........+....
T Consensus 4 kI~~v~-GtR~e~~kl~pli~~l~~~~~~~~~li~tG~H~~~~~~~~~~-----~~i~~---d~~l~~~~~~~s~~~~~- 73 (373)
T d1v4va_ 4 RVVLAF-GTRPEATKMAPVYLALRGIPGLKPLVLLTGQHREQLRQALSL-----FGIQE---DRNLDVMQERQALPDLA- 73 (373)
T ss_dssp EEEEEE-CSHHHHHHHHHHHHHHHTSTTEEEEEEECSSCHHHHHHHHHT-----TTCCC---SEECCCCSSCCCHHHHH-
T ss_pred eEEEEE-EhhHHHHHHHHHHHHHHhCCCCCEEEEEccCChhhhhCcchh-----cCCCc---cccCCCCCCCCCHHHHH-
Confidence 576665 888999999999999987 47999999888765543322110 12211 00011111122222222
Q ss_pred HHHHhccHHHHHHHHHHhcCCCCCccEEEe--CCCch-hHHHHHHHcCCceEEeccchhHHHHHHhhcccccccCccCCC
Q 012314 84 KCLQVMPGKLEELIEEINSREDEKIDCFIA--DGNIG-WSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDSH 160 (466)
Q Consensus 84 ~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~--D~~~~-~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 160 (466)
..+...+.+++.+ .+||+|++ |.+.. +++.+|..++||.+-+..+.-+ +..
T Consensus 74 ---~~~~~~~~~~l~~------~kPD~vlv~GDr~e~la~a~aa~~~~ipi~HiegG~rs--------------g~~--- 127 (373)
T d1v4va_ 74 ---ARILPQAARALKE------MGADYVLVHGDTLTTFAVAWAAFLEGIPVGHVEAGLRS--------------GNL--- 127 (373)
T ss_dssp ---HHHHHHHHHHHHH------TTCSEEEEESSCHHHHHHHHHHHHTTCCEEEETCCCCC--------------SCT---
T ss_pred ---HHHHHHHhhhhhh------cCcccccccccCccchhHHHHHHHhhhhheeecccccc--------------ccc---
Confidence 3334456667777 78998874 65555 6677888899999986532111 000
Q ss_pred CCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHHHhh--cCCcceecc
Q 012314 161 GTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTT--FPELLPIGP 238 (466)
Q Consensus 161 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~~~~--~p~v~~VGp 238 (466)
. ....+...+... ..-++..++.+...-+.-...- ..+++.||-
T Consensus 128 -----------------------~-----~~~~de~~R~~i------skls~~hf~~t~~~~~~L~~~Ge~~~~I~~vG~ 173 (373)
T d1v4va_ 128 -----------------------K-----EPFPEEANRRLT------DVLTDLDFAPTPLAKANLLKEGKREEGILVTGQ 173 (373)
T ss_dssp -----------------------T-----SSTTHHHHHHHH------HHHCSEEEESSHHHHHHHHTTTCCGGGEEECCC
T ss_pred -----------------------c-----cCcchhhhhhhh------ccccceeeecchhhhhhhhhhcccccceeeccc
Confidence 0 000001111110 0122333333332222110000 123444442
Q ss_pred ccCCCCCCCCCCCcccCCccchhhhccCCCCeEEEEEeccccc-cCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCC
Q 012314 239 LLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTI-LDQVQFQELALGLELCKRPFLWVVRPDITTDANDRY 317 (466)
Q Consensus 239 l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~-~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~ 317 (466)
...+.-.. ...+........+++.+++++-.... .....+..++..+......+.+.+.... ....
T Consensus 174 p~~D~i~~---------~~~~~~~~~~~~~~~~~lvt~hr~~n~~~~~~~~~~~~~~~~~~~~~~~i~p~~~----~~~~ 240 (373)
T d1v4va_ 174 TGVDAVLL---------AAKLGRLPEGLPEGPYVTVTMHRRENWPLLSDLAQALKRVAEAFPHLTFVYPVHL----NPVV 240 (373)
T ss_dssp HHHHHHHH---------HHHHCCCCTTCCSSCEEEECCCCGGGGGGHHHHHHHHHHHHHHCTTSEEEEECCS----CHHH
T ss_pred chhhHHHh---------hhhhcccccccccccceeEEeccccccchHHHHHHHHHHHhhhcccceeeeeecc----cccc
Confidence 21111000 00000001112335588888875432 2233444555555444444333332220 0111
Q ss_pred chhHHH--HhcCCceeecccchh---hhhcCCCcccceeccCCchhhhhhhcCcceeecccccchhhhHHHHHHhhhcee
Q 012314 318 PEGFQE--RVAARGQMISWAPQL---RVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGL 392 (466)
Q Consensus 318 ~~~~~~--~~~~n~~~~~~~p~~---~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~ 392 (466)
.....+ +...|+.+++-+++. .+|.++.+ +|+.+|.+ .-||.+.|+|+|.+....|-+.- + +. |.-+
T Consensus 241 ~~~~~~~~~~~~n~~~~~~l~~~~~l~ll~~s~~--vignSssg-i~Ea~~lg~P~Inir~~~eRqeg---~-~~-g~nv 312 (373)
T d1v4va_ 241 REAVFPVLKGVRNFVLLDPLEYGSMAALMRASLL--LVTDSGGL-QEEGAALGVPVVVLRNVTERPEG---L-KA-GILK 312 (373)
T ss_dssp HHHHHHHHTTCTTEEEECCCCHHHHHHHHHTEEE--EEESCHHH-HHHHHHTTCCEEECSSSCSCHHH---H-HH-TSEE
T ss_pred hhhhhhhhcccccceeeccchHHHHHHHhhhcee--Eecccchh-hhcchhhcCcEEEeCCCccCHHH---H-hc-CeeE
Confidence 111111 124688888777765 46877666 99987754 55999999999999664433332 2 22 6555
Q ss_pred EeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHH
Q 012314 393 KFDRDEGGIITREEIKNKVDQVLGNQDFKARALE 426 (466)
Q Consensus 393 ~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~ 426 (466)
.+. .+.++|.+++.+++++++++++...
T Consensus 313 lv~------~d~~~I~~~i~~~l~~~~~~~~~~~ 340 (373)
T d1v4va_ 313 LAG------TDPEGVYRVVKGLLENPEELSRMRK 340 (373)
T ss_dssp ECC------SCHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred EcC------CCHHHHHHHHHHHHcCHHHHhhccc
Confidence 443 4799999999999999988886654
|
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=98.71 E-value=4.5e-07 Score=87.31 Aligned_cols=136 Identities=10% Similarity=0.016 Sum_probs=79.8
Q ss_pred CeEEEEEeccccccCHHHHHHHHHHH---HhCCCCEEEEEcCCCCCCCCCCCch---hHHHHhcCCceeecccchh---h
Q 012314 269 SSVVYVSFGSFTILDQVQFQELALGL---ELCKRPFLWVVRPDITTDANDRYPE---GFQERVAARGQMISWAPQL---R 339 (466)
Q Consensus 269 ~~~v~vs~Gs~~~~~~~~~~~~~~a~---~~~~~~~i~~~~~~~~~~~~~~~~~---~~~~~~~~n~~~~~~~p~~---~ 339 (466)
+..+++..|.... ......+++++ .+.+.++++...++ ..... ........++.+..+.+.. .
T Consensus 290 ~~~~i~~vgrl~~--~KG~~~Ll~a~~~~~~~~~~l~~~G~G~------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 361 (477)
T d1rzua_ 290 GSPLFCVISRLTW--QKGIDLMAEAVDEIVSLGGRLVVLGAGD------VALEGALLAAASRHHGRVGVAIGYNEPLSHL 361 (477)
T ss_dssp SSCEEEEESCBST--TTTHHHHHTTHHHHHHTTCEEEEEECBC------HHHHHHHHHHHHHTTTTEEEEESCCHHHHHH
T ss_pred CccEEEEEeeeee--cCCcHHHHHHHHHHHhhCCeEEEEecCC------chHHHHHHHHHhhcCCeEEEEcccChhHHHH
Confidence 3466677887632 22233333333 34577777665443 11111 1222346778777666543 2
Q ss_pred hhcCCCcccceecc---CCc-hhhhhhhcCcceeecccccchhhhHHHHHH--------hhhceeEeecCCCCCcCHHHH
Q 012314 340 VLNHPSIACFLSHC---GWN-STMEGVSNGIPFLCWPYFGDQFLNERYICD--------FWKVGLKFDRDEGGIITREEI 407 (466)
Q Consensus 340 ll~~~~~~~~i~hg---G~~-s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~--------~~G~G~~l~~~~~~~~~~~~l 407 (466)
++..+++ +|.-. |.| +++||+++|+|+|+. |+......|.+ .-+.|...+ .-+.++|
T Consensus 362 ~~~~aD~--~v~PS~~E~fglv~lEAma~G~PvVas----~~GG~~E~v~d~~~~~~~~~~~~G~l~~-----~~d~~~l 430 (477)
T d1rzua_ 362 MQAGCDA--IIIPSRFEPCGLTQLYALRYGCIPVVA----RTGGLADTVIDANHAALASKAATGVQFS-----PVTLDGL 430 (477)
T ss_dssp HHHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEE----SSHHHHHHCCBCCHHHHHTTCCCBEEES-----SCSHHHH
T ss_pred HHHhCcc--ccCCccccCCCHHHHHHHHcCCCEEEc----CCCCCcceeecCCccccccCCCceEEeC-----CCCHHHH
Confidence 5555555 77654 334 778999999999987 44444443332 024788884 4589999
Q ss_pred HHHHHHHhc---CHHHHHH
Q 012314 408 KNKVDQVLG---NQDFKAR 423 (466)
Q Consensus 408 ~~~i~~ll~---~~~~r~~ 423 (466)
+++|.+++. |++.+++
T Consensus 431 a~ai~~~l~~~~~~~~~~~ 449 (477)
T d1rzua_ 431 KQAIRRTVRYYHDPKLWTQ 449 (477)
T ss_dssp HHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHhhhCCHHHHHH
Confidence 999998874 5554443
|
| >d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Escherichia coli [TaxId: 562]
Probab=98.53 E-value=3.8e-06 Score=77.48 Aligned_cols=350 Identities=12% Similarity=0.039 Sum_probs=178.7
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhC-CCEEEEEeCCcchHHHHHhhhcCCCCCCCeEE-EecCCCCCCCCCCccHHHH
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKH-GFRVTFVNTDYNHKRVVESLQGKNYLGEQIHL-VSIPDGMEPWEDRNDLGKL 81 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~r-Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 81 (466)
|||++++ +++..+.-+.+|.++|.+. +.++.++.+..+.+........ .++.. ..+. +.. ........
T Consensus 1 MKi~~v~-GtR~e~~kl~pli~~l~~~~~~~~~li~tG~H~~~~~~~~~~-----~~~~~~~~~~--~~~--~~~~~~~~ 70 (376)
T d1f6da_ 1 MKVLTVF-GTRPEAIKMAPLVHALAKDPFFEAKVCVTAQHREMLDQVLKL-----FSIVPDYDLN--IMQ--PGQGLTEI 70 (376)
T ss_dssp CEEEEEE-CSHHHHHHHHHHHHHHHHCTTCEEEEEECCTTGGGGHHHHHH-----TTCCCSEECC--CCS--SSSCHHHH
T ss_pred CeEEEEE-EhhHhHHHHHHHHHHHHhCCCCCEEEEEcCCCHHHHHHHHHh-----cCCCCCcccc--cCC--CCCCHHHH
Confidence 5788887 8999999999999999886 5899999987654322211100 01110 1111 111 11122222
Q ss_pred HHHHHHhccHHHHHHHHHHhcCCCCCccEEE--eCCCch-hHHHHHHHcCCceEEeccchhHHHHHHhhcccccccCccC
Q 012314 82 IEKCLQVMPGKLEELIEEINSREDEKIDCFI--ADGNIG-WSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIID 158 (466)
Q Consensus 82 ~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV--~D~~~~-~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~ 158 (466)
.......+.+++.+ .+||+|+ .|-+.. +++.+|..++||++-+..+--+ +.
T Consensus 71 ----~~~~i~~~~~~~~~------~kPD~v~v~GDr~e~la~a~aa~~~~ipi~HiegG~~s--------------~~-- 124 (376)
T d1f6da_ 71 ----TCRILEGLKPILAE------FKPDVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGLRT--------------GD-- 124 (376)
T ss_dssp ----HHHHHHHHHHHHHH------HCCSEEEEETTCHHHHHHHHHHHTTTCCEEEESCCCCC--------------SC--
T ss_pred ----HHHHHHhhHHHHHh------ccCcceeeeccccchhhHHHHHHhhCceEEEEeccccc--------------cc--
Confidence 22233445666666 6788876 455555 6777899999999986532111 00
Q ss_pred CCCCCCccccccccCCCCCCCcccccccccCCCCchhHHHHHHHHHHhhhccccEEEEcChhhccHHHHhh--cCCccee
Q 012314 159 SHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTT--FPELLPI 236 (466)
Q Consensus 159 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~s~~~le~~~~~~--~p~v~~V 236 (466)
. .. .++ +...+.. ...-++..++.+...-+.-...- ..+++.|
T Consensus 125 ---~---------~~--------~~p---------de~~R~~------iskls~~hf~~~~~~~~~L~~~G~~~~~I~~v 169 (376)
T d1f6da_ 125 ---L---------YS--------PWP---------EEANRTL------TGHLAMYHFSPTETSRQNLLRENVADSRIFIT 169 (376)
T ss_dssp ---T---------TS--------STT---------HHHHHHH------HHHTCSEEEESSHHHHHHHHHTTCCGGGEEEC
T ss_pred ---c---------cc--------cCc---------hhhhhhh------hccceeEEEeccHHHHhHHHhcCCCcccccee
Confidence 0 00 000 0111111 11234445555543332210000 2356666
Q ss_pred ccccCCCC------CCCCCCCcccCCccchhhhccCCCCeEEEEEeccccccCHH--HHHHHHHHHHhCCCCEEEEEcCC
Q 012314 237 GPLLASNR------LGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTILDQV--QFQELALGLELCKRPFLWVVRPD 308 (466)
Q Consensus 237 Gpl~~~~~------~~~~~~~~~~~~~~l~~~~~~~~~~~~v~vs~Gs~~~~~~~--~~~~~~~a~~~~~~~~i~~~~~~ 308 (466)
|-...+.- .... ..-....+.+.......++.|++++=........ .+...+..+......+.+.+...
T Consensus 170 G~~~~D~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ilvt~H~~~~~~~~~~~i~~~l~~~~~~~~~~~ii~p~~ 246 (376)
T d1f6da_ 170 GNTVIDALLWVRDQVMSS---DKLRSELAANYPFIDPDKKMILVTGHRRESFGRGFEEICHALADIATTHQDIQIVYPVH 246 (376)
T ss_dssp CCHHHHHHHHHHHHTTTC---HHHHHHHHTTCTTCCTTSEEEEECCCCBSSCCHHHHHHHHHHHHHHHHCTTEEEEEECC
T ss_pred cCchHHHHHHHHhhhhcc---chhhhhhhccccccCCCCceEEEecccchhhhhhHHHHHHHHhhhhhhcceeEEecccc
Confidence 64332110 0000 0000000111111112356888987644333332 22233334444455555554332
Q ss_pred CCCCCCCCCchhHHHH--hcCCceeecccchh---hhhcCCCcccceeccCCchhhhhhhcCcceeecccccchhhhHHH
Q 012314 309 ITTDANDRYPEGFQER--VAARGQMISWAPQL---RVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERY 383 (466)
Q Consensus 309 ~~~~~~~~~~~~~~~~--~~~n~~~~~~~p~~---~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~r 383 (466)
. .........+. ...|+.+++-+++. .+|.++.+ +|+..|. ..-||-+.|+|+|.+-...+|+. +
T Consensus 247 ~----~~~~~~~~~~~~~~~~ni~~~~~l~~~~fl~ll~~a~~--vignSss-gi~Ea~~lg~P~Inir~~ter~~---~ 316 (376)
T d1f6da_ 247 L----NPNVREPVNRILGHVKNVILIDPQEYLPFVWLMNHAWL--ILTDSGG-IQEEAPSLGKPVLVMRDTTERPE---A 316 (376)
T ss_dssp B----CHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHCSE--EEESSSG-GGGTGGGGTCCEEECSSCCSCHH---H
T ss_pred c----chhhhhhHhhhhcccccceeeccccHHHHHHHHhhceE--EEecCcc-hHhhHHHhCCCEEEcCCCccCcc---c
Confidence 0 01111112111 24788887666654 57888888 9998764 35699999999998855555654 4
Q ss_pred HHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHH
Q 012314 384 ICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALELKEKAMSSVREGGSSYKTFQNFLQ 450 (466)
Q Consensus 384 v~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~ 450 (466)
+. . |.-+.+. .+.+++.+++.+++.++.++++..+...-.- .|.+...|.++++
T Consensus 317 ~~-~-g~~i~v~------~~~~~I~~ai~~~l~~~~~~~~~~~~~npYG-----dG~as~rI~~iLk 370 (376)
T d1f6da_ 317 VT-A-GTVRLVG------TDKQRIVEEVTRLLKDENEYQAMSRAHNPYG-----DGQACSRILEALK 370 (376)
T ss_dssp HH-H-TSEEECC------SSHHHHHHHHHHHHHCHHHHHHHHHSCCTTC-----CSCHHHHHHHHHH
T ss_pred ee-c-CeeEECC------CCHHHHHHHHHHHHhChHhhhhhccCCCCCC-----CChHHHHHHHHHH
Confidence 43 2 6544442 4789999999999988877765544322221 2344555555554
|
| >d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: First mannosyl transferase WbaZ species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=98.17 E-value=1.9e-06 Score=69.93 Aligned_cols=141 Identities=13% Similarity=0.125 Sum_probs=86.3
Q ss_pred EEEeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchhHHHHhcCCceeecccchh---hhhcCCCcccc
Q 012314 273 YVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQL---RVLNHPSIACF 349 (466)
Q Consensus 273 ~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~---~ll~~~~~~~~ 349 (466)
++..|... +......+++|++.++..-++.++...+......+.+.+.+...+|+++.+|+|+. .++..+++-++
T Consensus 15 ~l~iGrl~--~~K~~~~~i~a~~~l~~~~l~ivg~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~i~ 92 (166)
T d2f9fa1 15 WLSVNRIY--PEKRIELQLEVFKKLQDEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSRCKGLLC 92 (166)
T ss_dssp EEEECCSS--GGGTHHHHHHHHHHCTTSCEEEEBCCCTTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHHCSEEEE
T ss_pred EEEEecCc--cccCHHHHHHHHHHhcCCeEEEEEecccccchhhhhhhhcccccCcEEEeeccccccccccccccccccc
Confidence 45567642 34456777788876664444555543110000111122222335789999999975 47777777333
Q ss_pred eec-cC-CchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCH-HHHHHHHH
Q 012314 350 LSH-CG-WNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQ-DFKARALE 426 (466)
Q Consensus 350 i~h-gG-~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~-~~r~~a~~ 426 (466)
-+. .| ..+++||+++|+|+|+.+..+ ....+.+. ..|...+ .+.+++.++|.++++|+ .+++++.+
T Consensus 93 ps~~e~~~~~~~Ea~~~g~pvi~s~~~~----~~e~i~~~-~~g~~~~------~d~~~~~~~i~~l~~~~~~~~~~~~~ 161 (166)
T d2f9fa1 93 TAKDEDFGLTPIEAMASGKPVIAVNEGG----FKETVINE-KTGYLVN------ADVNEIIDAMKKVSKNPDKFKKDCFR 161 (166)
T ss_dssp CCSSCCSCHHHHHHHHTTCCEEEESSHH----HHHHCCBT-TTEEEEC------SCHHHHHHHHHHHHHCTTTTHHHHHH
T ss_pred ccccccccccccccccccccceeecCCc----ceeeecCC-cccccCC------CCHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 232 23 358899999999999985443 34445553 6677553 26899999999999985 46665544
|
| >d1pswa_ c.87.1.7 (A:) ADP-heptose LPS heptosyltransferase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: ADP-heptose LPS heptosyltransferase II domain: ADP-heptose LPS heptosyltransferase II species: Escherichia coli [TaxId: 562]
Probab=97.60 E-value=0.0023 Score=57.57 Aligned_cols=104 Identities=11% Similarity=0.081 Sum_probs=71.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhC--CCEEEEEeCCcchHHHHHhhhcCCCCCCCeE-EEecCCCCCCCCCCccHHH
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKH--GFRVTFVNTDYNHKRVVESLQGKNYLGEQIH-LVSIPDGMEPWEDRNDLGK 80 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~r--Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 80 (466)
||||++-..+-|++.-+..+.++|+++ +.+|++++.+.+.+.+... +.++ ++.++.. . ..
T Consensus 1 MkILii~~~~iGD~il~~p~i~~Lk~~~P~~~I~~l~~~~~~~l~~~~--------p~id~v~~~~~~--~--~~----- 63 (348)
T d1pswa_ 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSRM--------PEVNEAIPMPLG--H--GA----- 63 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTTC--------TTEEEEEEC---------------
T ss_pred CeEEEEcCCChHHHHHHHHHHHHHHHHCCCCEEEEEEChhHHHHHhhC--------CCcCEEEEecCc--c--cc-----
Confidence 689999988889999999999999986 8999999998877765433 3453 3333211 0 00
Q ss_pred HHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCchhHHHHHHHcCCceEEe
Q 012314 81 LIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVF 134 (466)
Q Consensus 81 ~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~~~~~~A~~lgiP~v~~ 134 (466)
.......+++..++. .++|++|.-........++...+++....
T Consensus 64 -------~~~~~~~~l~~~l~~---~~~D~~i~~~~~~~~~~~~~~~~~~~~~~ 107 (348)
T d1pswa_ 64 -------LEIGERRKLGHSLRE---KRYDRAYVLPNSFKSALVPLFAGIPHRTG 107 (348)
T ss_dssp --------CHHHHHHHHHHTTT---TTCSEEEECSCCSGGGHHHHHTTCSEEEE
T ss_pred -------chhhhhhhHHHHhhh---cccceEeecccccchhhHHHhhccccccc
Confidence 012233456666666 78999997655556667778888887664
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=97.21 E-value=0.0003 Score=58.01 Aligned_cols=80 Identities=9% Similarity=-0.029 Sum_probs=55.2
Q ss_pred CCceeecccchh---hhhcCCCccccee----ccCCchhhhhhhcCcceeecccccchhhhHHHHHHhhhceeEeecCCC
Q 012314 327 ARGQMISWAPQL---RVLNHPSIACFLS----HCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEG 399 (466)
Q Consensus 327 ~n~~~~~~~p~~---~ll~~~~~~~~i~----hgG~~s~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~ 399 (466)
....+..+++.. .++..+++ +|. .|-.+++.||+++|+|+|+.-. ......+ .- +.|..+++
T Consensus 92 ~~~~~~~~~~~~~l~~~~~~~di--~v~ps~~e~~~~~~~Eam~~G~pvI~~~~----~~~~e~i-~~-~~g~~~~~--- 160 (196)
T d2bfwa1 92 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDII-TN-ETGILVKA--- 160 (196)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESC----HHHHHHC-CT-TTCEEECT---
T ss_pred eeEEeeeccccccchhccccccc--cccccccccccccchhhhhcCceeeecCC----Cccceee-cC-CceeeECC---
Confidence 344455888754 47777776 663 4445788999999999998632 3333333 32 77888843
Q ss_pred CCcCHHHHHHHHHHHhc-CHH
Q 012314 400 GIITREEIKNKVDQVLG-NQD 419 (466)
Q Consensus 400 ~~~~~~~l~~~i~~ll~-~~~ 419 (466)
-+.+++.++|.+++. +.+
T Consensus 161 --~~~~~l~~~i~~~l~~~~~ 179 (196)
T d2bfwa1 161 --GDPGELANAILKALELSRS 179 (196)
T ss_dssp --TCHHHHHHHHHHHHHCCHH
T ss_pred --CCHHHHHHHHHHHHhCCHH
Confidence 578999999999886 443
|
| >d1ccwa_ c.23.6.1 (A:) Glutamate mutase, small subunit {Clostridium cochlearium [TaxId: 1494]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Cobalamin (vitamin B12)-binding domain family: Cobalamin (vitamin B12)-binding domain domain: Glutamate mutase, small subunit species: Clostridium cochlearium [TaxId: 1494]
Probab=94.08 E-value=0.046 Score=41.19 Aligned_cols=44 Identities=11% Similarity=0.194 Sum_probs=39.8
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchH
Q 012314 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHK 44 (466)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~ 44 (466)
|+|.||++.+.++-.|.....-++..|..+|++|.++...-..+
T Consensus 1 ~~k~kVvi~~~~gD~H~lG~~mva~~l~~~G~~V~~LG~~~p~e 44 (137)
T d1ccwa_ 1 MEKKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVLSPQE 44 (137)
T ss_dssp CCCCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEEECHH
T ss_pred CCCCEEEEEecCCChhHHHHHHHHHHHHHCCCeEEecccccCHH
Confidence 89999999999999999999999999999999999998754333
|
| >d1xmpa_ c.23.8.1 (A:) N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) {Bacillus anthracis [TaxId: 1392]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) family: N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) domain: N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) species: Bacillus anthracis [TaxId: 1392]
Probab=89.04 E-value=3.4 Score=30.90 Aligned_cols=142 Identities=15% Similarity=0.112 Sum_probs=79.7
Q ss_pred CeEEEEEeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCccc
Q 012314 269 SSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIAC 348 (466)
Q Consensus 269 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~ 348 (466)
|+.|-|-+||.+ +...++++...++.++..+-..+.+. -..|+.+ .+|+...+- ..+++
T Consensus 1 K~~V~IimGS~S--D~~~~~~a~~~L~~~gi~~~~~v~SA------Hrtp~rl----------~~~~~~~~~---~~~~v 59 (155)
T d1xmpa_ 1 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSA------HRTPDYM----------FEYAETARE---RGLKV 59 (155)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT------TTSHHHH----------HHHHHHTTT---TTCCE
T ss_pred CCEEEEEECcHh--hHHHHHHHHHHHHHcCCcEEEEEech------hcChHHH----------HHHHHHHHh---hcceE
Confidence 357888889754 67789999999999999987776544 2344442 233333222 22334
Q ss_pred ceeccCCc----hhhhhhhcCcceeecccccch---hhhHHHHHHhh--hceeEeec-CCCCCcCHHHHHHHHHHHhcCH
Q 012314 349 FLSHCGWN----STMEGVSNGIPFLCWPYFGDQ---FLNERYICDFW--KVGLKFDR-DEGGIITREEIKNKVDQVLGNQ 418 (466)
Q Consensus 349 ~i~hgG~~----s~~eal~~GvP~l~~P~~~DQ---~~~a~rv~~~~--G~G~~l~~-~~~~~~~~~~l~~~i~~ll~~~ 418 (466)
+|.=.|.- ++..++ .-+|+|.+|....- .+.-.-+.+ + |+.+..-. .+.+..++.-++..|-. +.|+
T Consensus 60 iIa~AG~aa~Lpgvva~~-t~~PVIgVP~~~~~~~G~d~llS~vq-MP~Gipv~tv~v~~~~~~nAa~~A~~Il~-~~d~ 136 (155)
T d1xmpa_ 60 IIAGAGGAAHLPGMVAAK-TNLPVIGVPVQSKALNGLDSLLSIVQ-MPGGVPVATVAIGKAGSTNAGLLAAQILG-SFHD 136 (155)
T ss_dssp EEEEEESSCCHHHHHHTT-CCSCEEEEEECCTTTTTHHHHHHHHC-CCTTCCCEECCSSHHHHHHHHHHHHHHHH-TTCH
T ss_pred EEeecccCCCchhHHHHh-ccceEEEEEeecccCcCcccHHHHHh-CccCCCceEEEecCcchHHHHHHHHHHHc-cCCH
Confidence 77765532 444443 45899999986432 232222222 1 22222210 00011233344433332 3588
Q ss_pred HHHHHHHHHHHHHHHH
Q 012314 419 DFKARALELKEKAMSS 434 (466)
Q Consensus 419 ~~r~~a~~~~~~~~~~ 434 (466)
+++++.+..++.+.+.
T Consensus 137 ~l~~~l~~~r~~~~~~ 152 (155)
T d1xmpa_ 137 DIHDALELRREAIEKD 152 (155)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999888887764
|
| >d1j9ja_ c.106.1.1 (A:) SurE homolog TM1662 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: SurE-like superfamily: SurE-like family: SurE-like domain: SurE homolog TM1662 species: Thermotoga maritima [TaxId: 2336]
Probab=86.77 E-value=1.2 Score=36.91 Aligned_cols=43 Identities=16% Similarity=0.169 Sum_probs=27.2
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHH
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVE 48 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~ 48 (466)
||||+.-=-|. |.--+..|+++| +++|+|+++.+...+...-.
T Consensus 1 M~ILltNDDGi-~s~gl~~L~~~l-~~~~~V~vvAP~~~~S~~g~ 43 (247)
T d1j9ja_ 1 MRILVTNDDGI-QSKGIIVLAELL-SEEHEVFVVAPDKERSATGH 43 (247)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHH-TTTSEEEEEEESSCCTTCTT
T ss_pred CeEEEEcCCCC-CChHHHHHHHHH-hcCCeEEEEecCCCCcCCcc
Confidence 35544432222 223367778887 56899999999877665543
|
| >d1qkka_ c.23.1.1 (A:) Transcriptional regulatory protein DctD, receiver domain {Sinorhizobium meliloti [TaxId: 382]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: CheY-like family: CheY-related domain: Transcriptional regulatory protein DctD, receiver domain species: Sinorhizobium meliloti [TaxId: 382]
Probab=85.74 E-value=3.5 Score=30.36 Aligned_cols=63 Identities=10% Similarity=0.050 Sum_probs=42.6
Q ss_pred hcCcceeecccccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 012314 363 SNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALELKEKA 431 (466)
Q Consensus 363 ~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~~a~~~~~~~ 431 (466)
.-.+|+|++--..|.......+ + .|+--.+. +-++.++|..+|++++....+...-+.+++.+
T Consensus 70 ~~~~pvI~lT~~~~~~~~~~a~-~-~Ga~dyl~----KP~~~~~L~~~i~~~~~~~~~~~e~~~l~~~~ 132 (140)
T d1qkka_ 70 DPDLPMILVTGHGDIPMAVQAI-Q-DGAYDFIA----KPFAADRLVQSARRAEEKRRLVMENRSLRRAA 132 (140)
T ss_dssp CTTSCEEEEECGGGHHHHHHHH-H-TTCCEEEE----SSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcEEEEECCCCHHHHHHHH-H-cCCCEeec----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4568999887667776555555 4 48877885 55899999999999986544444434444433
|
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Probab=85.73 E-value=1.3 Score=40.53 Aligned_cols=105 Identities=14% Similarity=0.145 Sum_probs=66.2
Q ss_pred eecccchh---hhhcCCCccccee---ccCCc-hhhhhhhcCcc-----eeecccccchhhhHHHHHHhhhceeEeecCC
Q 012314 331 MISWAPQL---RVLNHPSIACFLS---HCGWN-STMEGVSNGIP-----FLCWPYFGDQFLNERYICDFWKVGLKFDRDE 398 (466)
Q Consensus 331 ~~~~~p~~---~ll~~~~~~~~i~---hgG~~-s~~eal~~GvP-----~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~ 398 (466)
+...+++. .++..+++ ++. .-|+| ++.|++++|+| +|+--+. ..+. . ++-|+.+++
T Consensus 335 ~~~~~~~~~l~a~~~~Adv--~v~~s~~EG~~lv~~Ea~a~~~p~~~g~lIlS~~~----G~~~---~-l~~g~lVnP-- 402 (456)
T d1uqta_ 335 LNQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFA----GAAN---E-LTSALIVNP-- 402 (456)
T ss_dssp ECSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTB----GGGG---T-CTTSEEECT--
T ss_pred ccCCcCHHHHhHHHhhhce--eecCCccCCCCcHHHHHHHhCCCCCCCcEEEeCCC----CCHH---H-hCCeEEECc--
Confidence 34555654 35666666 443 56776 55999999999 4444322 2222 2 455778854
Q ss_pred CCCcCHHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHh
Q 012314 399 GGIITREEIKNKVDQVLGNQ--DFKARALELKEKAMSSVREGGSSYKTFQNFLQWVKTN 455 (466)
Q Consensus 399 ~~~~~~~~l~~~i~~ll~~~--~~r~~a~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~ 455 (466)
.+.++++++|.++|+++ +-+++.+++++.+.. -+...=.+.+++.+.+.
T Consensus 403 ---~d~~~~A~ai~~aL~~~~~er~~~~~~~~~~v~~-----~~~~~W~~~fl~~l~~~ 453 (456)
T d1uqta_ 403 ---YDRDEVAAALDRALTMSLAERISRHAEMLDVIVK-----NDINHWQECFISDLKQI 453 (456)
T ss_dssp ---TCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHS
T ss_pred ---CCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH-----CCHHHHHHHHHHHHHhh
Confidence 58999999999999754 344555566666654 24455567777777654
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=84.82 E-value=0.49 Score=32.74 Aligned_cols=83 Identities=10% Similarity=0.126 Sum_probs=56.0
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcch--HHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCccHHH
Q 012314 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNH--KRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGK 80 (466)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (466)
.+||.|+-.++.| |.+||+-|+++||+|+-.=...+. ..+.+ .++.+..-. ...
T Consensus 8 ~~~ihfiGigG~G----Ms~LA~~L~~~G~~VsGSD~~~~~~~~~L~~---------~Gi~v~~g~---~~~-------- 63 (96)
T d1p3da1 8 VQQIHFIGIGGAG----MSGIAEILLNEGYQISGSDIADGVVTQRLAQ---------AGAKIYIGH---AEE-------- 63 (96)
T ss_dssp CCEEEEETTTSTT----HHHHHHHHHHHTCEEEEEESCCSHHHHHHHH---------TTCEEEESC---CGG--------
T ss_pred CCEEEEEEECHHH----HHHHHHHHHhCCCEEEEEeCCCChhhhHHHH---------CCCeEEECC---ccc--------
Confidence 3589999999888 888999999999999966443221 22222 245544311 000
Q ss_pred HHHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCch---hHHHHHHHcCCceE
Q 012314 81 LIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIG---WSMEIAKKMNVRGA 132 (466)
Q Consensus 81 ~~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~---~~~~~A~~lgiP~v 132 (466)
.+ ...|+||+....+ .-...|++.|||++
T Consensus 64 ------------------~i-----~~~d~vV~S~AI~~~npel~~A~~~gipii 95 (96)
T d1p3da1 64 ------------------HI-----EGASVVVVSSAIKDDNPELVTSKQKRIPVI 95 (96)
T ss_dssp ------------------GG-----TTCSEEEECTTSCTTCHHHHHHHHTTCCEE
T ss_pred ------------------cC-----CCCCEEEECCCcCCCCHHHHHHHHcCCCEE
Confidence 01 2479999998655 45788999999987
|
| >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Thermotoga maritima [TaxId: 2336]
Probab=84.65 E-value=0.5 Score=32.13 Aligned_cols=82 Identities=11% Similarity=-0.036 Sum_probs=55.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcc--hHHHHHhhhcCCCCCCCeEEEecCCCCCCCCCCccHHHH
Q 012314 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYN--HKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKL 81 (466)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (466)
+||-|+-.+|.| |.+||+-|+++||+|+-.=.... .+.+++. ++++.. +.... +
T Consensus 2 ~~ihfiGIgG~G----Ms~LA~~L~~~G~~VsGSD~~~~~~t~~L~~~---------Gi~i~~---gh~~~----~---- 57 (89)
T d1j6ua1 2 MKIHFVGIGGIG----MSAVALHEFSNGNDVYGSNIEETERTAYLRKL---------GIPIFV---PHSAD----N---- 57 (89)
T ss_dssp CEEEEETTTSHH----HHHHHHHHHHTTCEEEEECSSCCHHHHHHHHT---------TCCEES---SCCTT----S----
T ss_pred cEEEEEeECHHH----HHHHHHHHHhCCCeEEEEeCCCChhHHHHHHC---------CCeEEe---eeccc----c----
Confidence 678888888877 88999999999999987644321 1223332 455432 11111 0
Q ss_pred HHHHHHhccHHHHHHHHHHhcCCCCCccEEEeCCCch---hHHHHHHHcCCceE
Q 012314 82 IEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIG---WSMEIAKKMNVRGA 132 (466)
Q Consensus 82 ~~~~~~~~~~~~~~ll~~l~~~~~~~~DlvV~D~~~~---~~~~~A~~lgiP~v 132 (466)
+ ...|+||+..... .-...|+++|||++
T Consensus 58 ------------------i-----~~~d~vV~SsAI~~~npel~~A~~~gIpv~ 88 (89)
T d1j6ua1 58 ------------------W-----YDPDLVIKTPAVRDDNPEIVRARMERVPIE 88 (89)
T ss_dssp ------------------C-----CCCSEEEECTTCCTTCHHHHHHHHTTCCEE
T ss_pred ------------------c-----CCCCEEEEecCcCCCCHHHHHHHHcCCCcc
Confidence 0 2479999997644 56789999999986
|
| >d1u11a_ c.23.8.1 (A:) N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) {Acetobacter aceti [TaxId: 435]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) family: N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) domain: N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) species: Acetobacter aceti [TaxId: 435]
Probab=84.32 E-value=6.6 Score=29.42 Aligned_cols=141 Identities=17% Similarity=0.138 Sum_probs=78.7
Q ss_pred eEEEEEeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCcccc
Q 012314 270 SVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACF 349 (466)
Q Consensus 270 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~~ 349 (466)
|.|-|-+||.+ +...+++....++.++..+-..+.+- -..|+.+. +|+...+ ...++++
T Consensus 3 P~V~IimGS~S--D~~v~~~a~~~L~~~gI~~e~~v~SA------HR~p~~l~----------~~~~~~e---~~~~~vi 61 (159)
T d1u11a_ 3 PVVGIIMGSQS--DWETMRHADALLTELEIPHETLIVSA------HRTPDRLA----------DYARTAA---ERGLNVI 61 (159)
T ss_dssp CSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT------TTCHHHHH----------HHHHHTT---TTTCCEE
T ss_pred CeEEEEeCCHh--hHHHHHHHHHHHHHhCCceEEEEehH------hhChHHHH----------HHHHHHH---hcCCeEE
Confidence 45667788754 56788999999999999887666544 23455433 2222111 1233347
Q ss_pred eeccCCchh---hhhhhcCcceeeccccc---chhhhHHHHHHhh--hce--eEe-ecCCCCCcCHHHHHHHHHHHhcCH
Q 012314 350 LSHCGWNST---MEGVSNGIPFLCWPYFG---DQFLNERYICDFW--KVG--LKF-DRDEGGIITREEIKNKVDQVLGNQ 418 (466)
Q Consensus 350 i~hgG~~s~---~eal~~GvP~l~~P~~~---DQ~~~a~rv~~~~--G~G--~~l-~~~~~~~~~~~~l~~~i~~ll~~~ 418 (466)
|.=+|.-.- .=|-..-+|+|.+|... +..+.-.-+.+ + |+. ... .. .+..++.-++..|-. ++|+
T Consensus 62 Ia~AG~aaaLpgvva~~t~~PVIgvP~~~~~~~g~d~l~S~~q-MP~g~pv~tv~vg~--~~~~nAa~~A~~IL~-~~d~ 137 (159)
T d1u11a_ 62 IAGAGGAAHLPGMCAAWTRLPVLGVPVESRALKGMDSLLSIVQ-MPGGVPVGTLAIGA--SGAKNAALLAASILA-LYNP 137 (159)
T ss_dssp EEEEESSCCHHHHHHHHCSSCEEEEEECCTTTTTHHHHHHHHC-CCTTSCCEECCSSH--HHHHHHHHHHHHHHG-GGCH
T ss_pred EEEecCCCCCccceeeecceeEEEeccccccccccccHHHHhh-CcCCCCceEEEecC--CchHHHHHHHHHHHh-cCCH
Confidence 765554322 22334457999999754 44444333332 2 222 221 10 012223334443322 3589
Q ss_pred HHHHHHHHHHHHHHHHH
Q 012314 419 DFKARALELKEKAMSSV 435 (466)
Q Consensus 419 ~~r~~a~~~~~~~~~~~ 435 (466)
+++++.++.++++++.+
T Consensus 138 ~l~~kl~~~r~~~~~~v 154 (159)
T d1u11a_ 138 ALAARLETWRALQTASV 154 (159)
T ss_dssp HHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999988753
|
| >d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: GTPase domain of the signal sequence recognition protein Ffh species: Archaeon Acidianus ambivalens [TaxId: 2283]
Probab=83.09 E-value=4.2 Score=32.38 Aligned_cols=45 Identities=20% Similarity=0.341 Sum_probs=32.0
Q ss_pred CCCEEEEEc-CCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHH
Q 012314 2 SRPRVLVMP-APAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRV 46 (466)
Q Consensus 2 ~~~~il~~~-~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~ 46 (466)
++.+|+++. ..|-|=..-...||..+.++|.+|.+++.+-+....
T Consensus 10 k~p~vi~lvGptGvGKTTTiAKLA~~~~~~g~kV~lit~Dt~R~ga 55 (211)
T d1j8yf2 10 KIPYVIMLVGVQGTGKATTAGKLAYFYKKKGFKVGLVGADVYRPAA 55 (211)
T ss_dssp SSSEEEEEECSCCC----HHHHHHHHHHHTTCCEEEEECCCSSHHH
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEEeeccccch
Confidence 445555554 556699999999999999999999999998665543
|
| >d1o4va_ c.23.8.1 (A:) N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) family: N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) domain: N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) species: Thermotoga maritima [TaxId: 2336]
Probab=82.60 E-value=8.2 Score=29.20 Aligned_cols=139 Identities=14% Similarity=0.108 Sum_probs=79.1
Q ss_pred EEEEEeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCcccce
Q 012314 271 VVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFL 350 (466)
Q Consensus 271 ~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~~i 350 (466)
-|.|-+||.+ +...++++...++.++..+-..+.+. -..|+.+.+ ++... ....++++|
T Consensus 2 kV~Ii~Gs~S--D~~~~~~a~~~L~~~gi~~~~~v~sa------Hr~p~rl~~----------~~~~~---~~~~~~viI 60 (169)
T d1o4va_ 2 RVGIIMGSDS--DLPVMKQAAEILEEFGIDYEITIVSA------HRTPDRMFE----------YAKNA---EERGIEVII 60 (169)
T ss_dssp EEEEEESCGG--GHHHHHHHHHHHHHTTCEEEEEECCT------TTCHHHHHH----------HHHHT---TTTTCCEEE
T ss_pred eEEEEECcHh--hHHHHHHHHHHHHHcCCcEEEEEeee------ecCHHHHHH----------HHHHH---HhcCCeEEE
Confidence 5667777653 67789999999999999887776544 234444332 11111 112233466
Q ss_pred eccCCc----hhhhhhhcCcceeecccccc---hhhhHHHHHHh-hhceeEee-cCCCCCcCHHHHHHHHHHHhcCHHHH
Q 012314 351 SHCGWN----STMEGVSNGIPFLCWPYFGD---QFLNERYICDF-WKVGLKFD-RDEGGIITREEIKNKVDQVLGNQDFK 421 (466)
Q Consensus 351 ~hgG~~----s~~eal~~GvP~l~~P~~~D---Q~~~a~rv~~~-~G~G~~l~-~~~~~~~~~~~l~~~i~~ll~~~~~r 421 (466)
.=.|.- ++..+ ..-+|+|.+|.... ..+.-.-+.+- -|+|+..- . .+..++..++..|-- ++|++++
T Consensus 61 a~AG~aa~LpgvvA~-~t~~PVIgvP~~~~~~~G~daLlS~lqmp~gvpVatV~I--d~~~nAA~~A~~Il~-l~d~~i~ 136 (169)
T d1o4va_ 61 AGAGGAAHLPGMVAS-ITHLPVIGVPVKTSTLNGLDSLFSIVQMPGGVPVATVAI--NNAKNAGILAASILG-IKYPEIA 136 (169)
T ss_dssp EEEESSCCHHHHHHH-HCSSCEEEEEECCTTTTTHHHHHHHHTCCTTCCCEECCT--TCHHHHHHHHHHHHH-TTCHHHH
T ss_pred EeecCCcCchHHHHH-hcceeEEecccccccCccHHHHHHhccCCccCCceeeec--CchHHHHHHHHHHHh-CCCHHHH
Confidence 644432 23333 33579999998543 33332222220 14333321 1 134445555555543 3689999
Q ss_pred HHHHHHHHHHHHH
Q 012314 422 ARALELKEKAMSS 434 (466)
Q Consensus 422 ~~a~~~~~~~~~~ 434 (466)
++.++.++.+.+.
T Consensus 137 ~kl~~~r~~~~~~ 149 (169)
T d1o4va_ 137 RKVKEYKERMKRE 149 (169)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999988874
|
| >d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: GTPase domain of the signal recognition particle receptor FtsY species: Escherichia coli [TaxId: 562]
Probab=82.09 E-value=4.6 Score=32.13 Aligned_cols=45 Identities=18% Similarity=0.273 Sum_probs=35.8
Q ss_pred CEEE-EEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHH
Q 012314 4 PRVL-VMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVE 48 (466)
Q Consensus 4 ~~il-~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~~~ 48 (466)
.+|+ |+-..|-|=..-...||..+.++|..|.+++.+-+.....+
T Consensus 9 p~vi~lvGptGvGKTTTiAKLA~~~~~~g~kV~lit~Dt~R~gA~e 54 (211)
T d2qy9a2 9 PFVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVE 54 (211)
T ss_dssp TEEEEEECCTTSCHHHHHHHHHHHHHTTTCCEEEECCCTTCHHHHH
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEecccccccchh
Confidence 3454 55566779999999999999999999999999876654433
|
| >d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) species: Escherichia coli [TaxId: 562]
Probab=81.84 E-value=0.38 Score=39.37 Aligned_cols=41 Identities=17% Similarity=0.331 Sum_probs=31.1
Q ss_pred CCCEEEEEcCCCccCHHH------------HHHHHHHHHhCCCEEEEEeCCcc
Q 012314 2 SRPRVLVMPAPAQGHVIP------------LLEFSQCLAKHGFRVTFVNTDYN 42 (466)
Q Consensus 2 ~~~~il~~~~~~~GH~~p------------~l~la~~L~~rGh~Vt~~~~~~~ 42 (466)
+.+||++...|..-++.| =.+||+++..+||+||+++.+..
T Consensus 5 ~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~ 57 (223)
T d1u7za_ 5 KHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS 57 (223)
T ss_dssp TTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC
T ss_pred CCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccc
Confidence 456777666665555544 36899999999999999999764
|
| >d1yioa2 c.23.1.1 (A:3-130) Response regulatory protein StyR, N-terminal domain {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: CheY-like family: CheY-related domain: Response regulatory protein StyR, N-terminal domain species: Pseudomonas fluorescens [TaxId: 294]
Probab=81.47 E-value=2.2 Score=30.90 Aligned_cols=119 Identities=13% Similarity=-0.002 Sum_probs=64.9
Q ss_pred CeEEEEEeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchhHHHHh---cCCceeecccchhhhhcCCC
Q 012314 269 SSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERV---AARGQMISWAPQLRVLNHPS 345 (466)
Q Consensus 269 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~---~~n~~~~~~~p~~~ll~~~~ 345 (466)
||.|+| .-.+......+...++..|+++.....+ +...+.. ..++.+.++
T Consensus 2 kP~ILi-----VDDd~~~~~~l~~~L~~~g~~v~~a~~~-----------~~al~~~~~~~~dliilD~----------- 54 (128)
T d1yioa2 2 KPTVFV-----VDDDMSVREGLRNLLRSAGFEVETFDCA-----------STFLEHRRPEQHGCLVLDM----------- 54 (128)
T ss_dssp CCEEEE-----ECSCHHHHHHHHHHHHTTTCEEEEESSH-----------HHHHHHCCTTSCEEEEEES-----------
T ss_pred CCEEEE-----EECCHHHHHHHHHHHHHcCCCccccccH-----------HHHHHHHHhcCCCEeehhh-----------
Confidence 446666 5566777788888889999987644321 2211111 122333333
Q ss_pred cccceeccCCchhhhhhhc---CcceeecccccchhhhHHHHHHhhhceeEeecCCCCCcCHHHHHHHHHHHhcCHHHHH
Q 012314 346 IACFLSHCGWNSTMEGVSN---GIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKA 422 (466)
Q Consensus 346 ~~~~i~hgG~~s~~eal~~---GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~r~ 422 (466)
....+....+++.+.. -.|++++-...| ...+.+.-+ .|+--.+. .-++.++|.++|+++|+....++
T Consensus 55 ---~mp~~~G~~~~~~i~~~~~~~~ii~lt~~~~-~~~~~~a~~-~Ga~dyl~----KP~~~~~L~~~i~~~l~~~~~~~ 125 (128)
T d1yioa2 55 ---RMPGMSGIELQEQLTAISDGIPIVFITAHGD-IPMTVRAMK-AGAIEFLP----KPFEEQALLDAIEQGLQLNAERR 125 (128)
T ss_dssp ---CCSSSCHHHHHHHHHHTTCCCCEEEEESCTT-SCCCHHHHH-TTEEEEEE----SSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---hcccchhHHHHHHHHhhCCCCeEEEEEEECC-HHHHHHHHH-CCCCEEEE----CCCCHHHHHHHHHHHHHHHHHHh
Confidence 1111122233344333 345544433333 344444445 48877775 56899999999999985444443
Q ss_pred H
Q 012314 423 R 423 (466)
Q Consensus 423 ~ 423 (466)
+
T Consensus 126 q 126 (128)
T d1yioa2 126 Q 126 (128)
T ss_dssp H
T ss_pred h
Confidence 3
|
| >d1qcza_ c.23.8.1 (A:) N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) family: N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) domain: N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) species: Escherichia coli [TaxId: 562]
Probab=80.47 E-value=9.7 Score=28.61 Aligned_cols=142 Identities=14% Similarity=0.145 Sum_probs=77.5
Q ss_pred EEEEeccccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCCCCCchhHHHHhcCCceeecccchhhhhcCCCccccee
Q 012314 272 VYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLS 351 (466)
Q Consensus 272 v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~p~~~ll~~~~~~~~i~ 351 (466)
|.|-+||.+ +...++++...|+.++..+-..+-+- -..|+.+.+ |+.... ...++++|.
T Consensus 4 V~IImGS~S--D~~~~~~a~~~L~~~gI~~e~~v~SA------HRtp~~l~~----------~~~~~~---~~~~~ViIa 62 (163)
T d1qcza_ 4 VAIVMGSKS--DWATMQFAAEIFEILNVPHHVEVVSA------HRTPDKLFS----------FAESAE---ENGYQVIIA 62 (163)
T ss_dssp EEEEESSGG--GHHHHHHHHHHHHHHTCCEEEEECCT------TTCHHHHHH----------HHHHTT---TTTCSEEEE
T ss_pred EEEEECcHh--hHHHHHHHHHHHHHcCCCeEEEEecc------ccCHHHHHH----------HHHHHH---HcCCeEEEE
Confidence 455568754 67789999999999998887666544 234554332 222111 122334777
Q ss_pred ccCCc----hhhhhhhcCcceeecccccch---hhhHHHHHHh-hhceeEeec-CCCCCcCHHHHHHHHHHHhcCHHHHH
Q 012314 352 HCGWN----STMEGVSNGIPFLCWPYFGDQ---FLNERYICDF-WKVGLKFDR-DEGGIITREEIKNKVDQVLGNQDFKA 422 (466)
Q Consensus 352 hgG~~----s~~eal~~GvP~l~~P~~~DQ---~~~a~rv~~~-~G~G~~l~~-~~~~~~~~~~l~~~i~~ll~~~~~r~ 422 (466)
=.|.- ++.. -..-+|+|.+|...+- .+.-.-+.+- .|+.+-.-. ...+..++.-++..|-- +.|+++++
T Consensus 63 ~AG~aa~LpgvvA-~~t~~PVIgVP~~~~~~~g~d~lls~~qMp~g~pv~tv~v~~~~~~nAal~A~~IL~-~~d~~l~~ 140 (163)
T d1qcza_ 63 GAGGAAHLPGMIA-AKTLVPVLGVPVQSAALSGVDSLYSIVQMPRGIPVGTLAIGKAGAANAALLAAQILA-THDKELHQ 140 (163)
T ss_dssp EECSSCCHHHHHH-HSCSSCEEEEECCCTTTTTHHHHHHHHTCCTTCCCEECCSSHHHHHHHHHHHHHHHH-TTCHHHHH
T ss_pred eccCCCcccchhh-HhccceeeeccccccccCCcchhhHHhhccCCCCceEEEEecCchHHHHHHHHHHHc-CCCHHHHH
Confidence 66543 3333 3357899999986532 2222222110 144433210 00012233344444433 36899999
Q ss_pred HHHHHHHHHHHHHh
Q 012314 423 RALELKEKAMSSVR 436 (466)
Q Consensus 423 ~a~~~~~~~~~~~~ 436 (466)
+.++.++..++.+.
T Consensus 141 kl~~~r~~~~~~v~ 154 (163)
T d1qcza_ 141 RLNDWRKAQTDEVL 154 (163)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 99998888877544
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| >d7reqa2 c.23.6.1 (A:561-728) Methylmalonyl-CoA mutase alpha subunit, C-terminal domain {Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Cobalamin (vitamin B12)-binding domain family: Cobalamin (vitamin B12)-binding domain domain: Methylmalonyl-CoA mutase alpha subunit, C-terminal domain species: Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]
Probab=80.01 E-value=1.9 Score=33.10 Aligned_cols=45 Identities=22% Similarity=0.243 Sum_probs=38.5
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHH
Q 012314 2 SRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRV 46 (466)
Q Consensus 2 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~Vt~~~~~~~~~~~ 46 (466)
++.||++.+.++.+|..-..-+++.|...|++|.........+.+
T Consensus 36 r~pkVlla~~g~D~Hd~G~~~va~~l~~~G~eVi~lg~~~~~e~i 80 (168)
T d7reqa2 36 RRPRILLAKMGQDGHDRGQKVIATAYADLGFDVDVGPLFQTPEET 80 (168)
T ss_dssp SCCEEEEECBTTCCCCHHHHHHHHHHHHTTCEEEECCTTBCHHHH
T ss_pred CCCeEEEEeCCccHHHHHHHHHHHHHHhCCcceecCCCcCcHHHH
Confidence 467999999999999999999999999999999998776444443
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