Citrus Sinensis ID: 012343

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-----
MINLVISCFRSNFPSYITLFLHCSLLCMSMLRHDYDFQAVLETVAKITHEKMKRNDTQEANGTRPFQFQDVFFSDQEDSDDEMTLIDKKDNVFVMSNKKSKYPVLQVDLRLISDLVVVIVSAAIGGIIFSCLGQPVIVGYLLAGSIIGPGGLKFISELVQLCGAKLSEGVFVGSFLSMSSTAVVVKFLVEQNSNNALHGQVTIGTLILQDCAVGLLFALLPVLGGNSGLLQGMVSMGKLLLVLSIYLTVTSILSWSFVPRFLKLMIQLSSQTNELYQLAAVAFCLLSAWCSDKLGLSLELGSFMAGVMISTTDFAKHTLDQVEPIRNLFAALFLSSIGMLIHVHFLWNHVDILLASVILVIIVKTAVGTIVTKLFGYSMRTSFLVGVSLAQIGEFAFVLLSRASNLHLVEGKMYLLLLGTTALSLVTTPLLFKLIPNVMNLGILLHWFPSEGTPRSEASSPGWSA
cHHHHHHHHHHccHHHHHHHHHHcccccccccccccccHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHEEccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHccccHHHHHHHHcccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHcHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccc
ccEEEEEcccccccHHHHHHHEHcccccHHHHHHHHHHEEEEEEEEEcccccccccccccccccccccEEEEcccccccccccEEEEccccEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccHEEHHHHHHHEccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccEEEEcccc
MINLVISCFRSNFPSYITLFLHCSLLCMSMLRHDYDFQAVLETVAKITHEKmkrndtqeangtrpfqfqdvffsdqedsddemtlidkkdnvfvmsnkkskypvlQVDLRLISDLVVVIVSAAIGGIIFSCLGQPVIVGYLLagsiigpggLKFISELVQLCGAKLSEGVFVGSFLSMSSTAVVVKFLVEQnsnnalhgqvtIGTLILQDCAVGLLFALLpvlggnsglLQGMVSMGKLLLVLSIYLTVTSILSWSFVPRFLKLMIQLSSQTNELYQLAAVAFCLLSAWCSDKLGLSLELGSFMAGVMISTTDFAKHTLDQVEPIRNLFAALFLSSIGMLIHVHFLWNHVDILLASVILVIIVKTAVGTIVTKLFGYSMRTSFLVGVSLAQIGEFAFVLLSRASNLHLVEGKMYLLLLGTTALSLVTTPLLFKLIPNVMNLGILlhwfpsegtprseasspgwsa
MINLVISCFRSNFPSYITLFLHCSLLCMSMLRHDYDFQAVLETVAKITHEKMkrndtqeangtrpfqFQDVFFSDQEDSDDEMTLIDKKDNVFVMSNKKSKYPVLQVDLRLISDLVVVIVSAAIGGIIFSCLGQPVIVGYLLAGSIIGPGGLKFISELVQLCGAKLSEGVFVGSFLSMSSTAVVVKFLVEQNSNNALHGQVTIGTLILQDCAVGLLFALLPVLGGNSGLLQGMVSMGKLLLVLSIYLTVTSILSWSFVPRFLKLMIQLSSQTNELYQLAAVAFCLLSAWCSDKLGLSLELGSFMAGVMISTTDFAKHTLDQVEPIRNLFAALFLSSIGMLIHVHFLWNHVDILLASVILVIIVKTAVGTIVTKLFGYSMRTSFLVGVSLAQIGEFAFVLLSRASNLHLVEGKMYLLLLGTTALSLVTTPLLFKLIPNVMNLGILLHWFPsegtprseasspgwsa
MINLVISCFRSNFPSYITLFLHCSLLCMSMLRHDYDFQAVLETVAKITHEKMKRNDTQEANGTRPFQFQDVFFSDQEDSDDEMTLIDKKDNVFVMSNKKSKYPVLQVDLRLISDLvvvivsaaiggiiFSCLGQPVIVGYLLAGSIIGPGGLKFISELVQLCGAKLSEGVFVGSFLSMSSTAVVVKFLVEQNSNNALHGQVTIGTLILQDCAVGLLFALLPVLGGNSGLLQGMVSMGKLLLVLSIYLTVTSILSWSFVPRFLKLMIQLSSQTNELYQLAAVAFCLLSAWCSDKLGLSLELGSFMAGVMISTTDFAKHTLDQVEPIRNLFAALFLSSIGMLIHVHFLWNHvdillasvilviivKTAVGTIVTKLFGYSMRTSFLVGVSLAQIGEFAFVLLSRASNLHLVEGKMYllllgttalslvttPLLFKLIPNVMNLGILLHWFPSEGTPRSEASSPGWSA
**NLVISCFRSNFPSYITLFLHCSLLCMSMLRHDYDFQAVLETVAKIT**********************VF*************IDKKDNVFVMSNKKSKYPVLQVDLRLISDLVVVIVSAAIGGIIFSCLGQPVIVGYLLAGSIIGPGGLKFISELVQLCGAKLSEGVFVGSFLSMSSTAVVVKFLVEQNSNNALHGQVTIGTLILQDCAVGLLFALLPVLGGNSGLLQGMVSMGKLLLVLSIYLTVTSILSWSFVPRFLKLMIQLSSQTNELYQLAAVAFCLLSAWCSDKLGLSLELGSFMAGVMISTTDFAKHTLDQVEPIRNLFAALFLSSIGMLIHVHFLWNHVDILLASVILVIIVKTAVGTIVTKLFGYSMRTSFLVGVSLAQIGEFAFVLLSRASNLHLVEGKMYLLLLGTTALSLVTTPLLFKLIPNVMNLGILLHWFP****************
**NLVISCFRSNFPSYITLFLH************Y**QAVLETVAK*************************FFS**EDSDDEMTLIDKKDNVFVMSNKKSKYPVLQVDLRLISDLVVVIVSAAIGGIIFSCLGQPVIVGYLLAGSIIGPGGLKFISELVQLCGAKLSEGVFVGSFLSMSSTAVVVKFLV*********GQVTIGTLILQDCAVGLLFALLPVLGGNSGLLQGMVSMGKLLLVLSIYLTVTSILSWSFVPRFLKLMIQLSSQTNELYQLAAVAFCLLSAWCSDKLGLSLELGSFMAGVMISTTDFAKHTLDQVEPIRNLFAALFLSSIGMLIHVHFLWNHVDILLASVILVIIVKTAVGTIVTKLFGYSMRTSFLVGVSLAQIGEFAFVLLSRASNLHLVEGKMYLLLLGTTALSLVTTPLLFKLIPNVMNLG***********************
MINLVISCFRSNFPSYITLFLHCSLLCMSMLRHDYDFQAVLETVAKITHEKMKRNDTQEANGTRPFQFQDVFFSDQEDSDDEMTLIDKKDNVFVMSNKKSKYPVLQVDLRLISDLVVVIVSAAIGGIIFSCLGQPVIVGYLLAGSIIGPGGLKFISELVQLCGAKLSEGVFVGSFLSMSSTAVVVKFLVEQNSNNALHGQVTIGTLILQDCAVGLLFALLPVLGGNSGLLQGMVSMGKLLLVLSIYLTVTSILSWSFVPRFLKLMIQLSSQTNELYQLAAVAFCLLSAWCSDKLGLSLELGSFMAGVMISTTDFAKHTLDQVEPIRNLFAALFLSSIGMLIHVHFLWNHVDILLASVILVIIVKTAVGTIVTKLFGYSMRTSFLVGVSLAQIGEFAFVLLSRASNLHLVEGKMYLLLLGTTALSLVTTPLLFKLIPNVMNLGILLHWFPSE**************
MINLVISCFRSNFPSYITLFLHCSLLCMSMLRHDYDFQAVLETVAKITHE*************RPFQFQDVFFSDQEDSDDEMTLIDKKDNVFVMSNKKSKYPVLQVDLRLISDLVVVIVSAAIGGIIFSCLGQPVIVGYLLAGSIIGPGGLKFISELVQLCGAKLSEGVFVGSFLSMSSTAVVVKFLVEQNSNNALHGQVTIGTLILQDCAVGLLFALLPVLGGNSGLLQGMVSMGKLLLVLSIYLTVTSILSWSFVPRFLKLMIQLSSQTNELYQLAAVAFCLLSAWCSDKLGLSLELGSFMAGVMISTTDFAKHTLDQVEPIRNLFAALFLSSIGMLIHVHFLWNHVDILLASVILVIIVKTAVGTIVTKLFGYSMRTSFLVGVSLAQIGEFAFVLLSRASNLHLVEGKMYLLLLGTTALSLVTTPLLFKLIPNVMNLGILLHWFPSEGTPRSEASSPGWS*
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MINLVISCFRSNFPSYITLFLHCSLLCMSMLRHDYDFQAVLETVAKITHEKMKRNDTQEANGTRPFQFQDVFFSDQEDSDDEMTLIDKKDNVFVMSNKKSKYPVLQVDLRLISDLVVVIVSAAIGGIIFSCLGQPVIVGYLLAGSIIGPGGLKFISELVQLCGAKLSEGVFVGSFLSMSSTAVVVKFLVEQNSNNALHGQVTIGTLILQDCAVGLLFALLPVLGGNSGLLQGMVSMGKLLLVLSIYLTVTSILSWSFVPRFLKLMIQLSSQTNELYQLAAVAFCLLSAWCSDKLGLSLELGSFMAGVMISTTDFAKHTLDQVEPIRNLFAALFLSSIGMLIHVHFLWNHVDILLASVILVIIVKTAVGTIVTKLFGYSMRTSFLVGVSLAQIGEFAFVLLSRASNLHLVEGKMYLLLLGTTALSLVTTPLLFKLIPNVMNLGILLHWFPSEGTPRSEASSPGWSA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query465 2.2.26 [Sep-21-2011]
Q8VYR9568 K(+) efflux antiporter 5 yes no 0.907 0.742 0.753 0.0
B5X0N6597 K(+) efflux antiporter 6 no no 0.883 0.688 0.656 1e-161
Q9ZUN3592 K(+) efflux antiporter 4 no no 0.877 0.689 0.646 1e-157
A8AQP0 601 Glutathione-regulated pot yes no 0.709 0.549 0.312 8e-30
B2VK47 601 Glutathione-regulated pot yes no 0.681 0.527 0.304 1e-28
Q8Z1Y7 601 Glutathione-regulated pot N/A no 0.645 0.499 0.296 4e-28
B5BH03 601 Glutathione-regulated pot yes no 0.645 0.499 0.296 4e-28
C0Q0D3 601 Glutathione-regulated pot yes no 0.645 0.499 0.296 4e-28
Q5PL21 601 Glutathione-regulated pot yes no 0.645 0.499 0.296 4e-28
Q57J15 601 Glutathione-regulated pot yes no 0.645 0.499 0.296 4e-28
>sp|Q8VYR9|KEA5_ARATH K(+) efflux antiporter 5 OS=Arabidopsis thaliana GN=KEA5 PE=2 SV=1 Back     alignment and function desciption
 Score =  705 bits (1819), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/475 (75%), Positives = 395/475 (83%), Gaps = 53/475 (11%)

Query: 36  DFQAVLETVAKITHEKMKRNDTQEANGTRPFQFQDVFFSDQEDSDDEMTLIDKKDNVFVM 95
           D QA +ETVAK+THEK KRNDTQE NGTRPFQ QDVF  + EDSDD MTLIDKK+NVFVM
Sbjct: 80  DQQAEIETVAKVTHEKGKRNDTQENNGTRPFQLQDVFSLENEDSDD-MTLIDKKNNVFVM 138

Query: 96  SNKKSKYPVLQVDLRLISDLVVVIVSAAIGGIIFSCLGQPVIVGYLLAGSIIGPGGLKFI 155
           SNKKSKYP+LQVDLRLISDLVV+IV AAIGGI+FSCLGQPVIVGYLLAGSIIGPGGLKFI
Sbjct: 139 SNKKSKYPILQVDLRLISDLVVIIVFAAIGGIVFSCLGQPVIVGYLLAGSIIGPGGLKFI 198

Query: 156 SELVQ----------------------------------------------------LCG 163
           SE+VQ                                                    LCG
Sbjct: 199 SEMVQVETVAQFGVVFLLFALGLEFSMTKLKVVGPVAVLGGLLQIVLLMFLCGVTALLCG 258

Query: 164 AKLSEGVFVGSFLSMSSTAVVVKFLVEQNSNNALHGQVTIGTLILQDCAVGLLFALLPVL 223
           A+LSEG+FVG+FLSMSSTAVVVKFLVE+NS ++LHGQVTIG LI QDC VGLLFALLPVL
Sbjct: 259 ARLSEGIFVGAFLSMSSTAVVVKFLVERNSTSSLHGQVTIGILIFQDCVVGLLFALLPVL 318

Query: 224 GGNSGLLQGMVSMGKLLLVLSIYLTVTSILSWSFVPRFLKLMIQLSSQTNELYQLAAVAF 283
           GGNSGLLQG++SMGKLLL+LSIYLTV S+L+WSFVPRFLKLMIQLSSQTNELYQLAAVAF
Sbjct: 319 GGNSGLLQGIISMGKLLLILSIYLTVASLLTWSFVPRFLKLMIQLSSQTNELYQLAAVAF 378

Query: 284 CLLSAWCSDKLGLSLELGSFMAGVMISTTDFAKHTLDQVEPIRNLFAALFLSSIGMLIHV 343
           CLLSAWCSDKLGLSLELGSF+AGVM+STT+FA+HTL+QVEPIRNLFAALFLSSIGMLI+V
Sbjct: 379 CLLSAWCSDKLGLSLELGSFVAGVMLSTTEFAQHTLEQVEPIRNLFAALFLSSIGMLINV 438

Query: 344 HFLWNHVDILLASVILVIIVKTAVGTIVTKLFGYSMRTSFLVGVSLAQIGEFAFVLLSRA 403
           HFLWNHVDILLASVILVI++KTA+  +V K F Y+MR SF VGV LAQIGEFAFVLLSRA
Sbjct: 439 HFLWNHVDILLASVILVIVIKTAIAAVVVKAFRYNMRISFHVGVLLAQIGEFAFVLLSRA 498

Query: 404 SNLHLVEGKMYLLLLGTTALSLVTTPLLFKLIPNVMNLGILLHWFPSEGTPRSEA 458
           SNLH++EGKMYLLLLGTTALSLVTTPLLFKLIP+ MNLG+LL WFPSE +  +E+
Sbjct: 499 SNLHVIEGKMYLLLLGTTALSLVTTPLLFKLIPSAMNLGVLLRWFPSENSSPNES 553
May operate as a K(+)/H(+) antiporter.
Arabidopsis thaliana (taxid: 3702)
>sp|B5X0N6|KEA6_ARATH K(+) efflux antiporter 6 OS=Arabidopsis thaliana GN=KEA6 PE=2 SV=1 Back     alignment and function description
>sp|Q9ZUN3|KEA4_ARATH K(+) efflux antiporter 4 OS=Arabidopsis thaliana GN=KEA4 PE=2 SV=2 Back     alignment and function description
>sp|A8AQP0|KEFB_CITK8 Glutathione-regulated potassium-efflux system protein KefB OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=kefB PE=3 SV=1 Back     alignment and function description
>sp|B2VK47|KEFB_ERWT9 Glutathione-regulated potassium-efflux system protein KefB OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=kefB PE=3 SV=1 Back     alignment and function description
>sp|Q8Z1Y7|KEFB_SALTI Glutathione-regulated potassium-efflux system protein KefB OS=Salmonella typhi GN=kefB PE=3 SV=1 Back     alignment and function description
>sp|B5BH03|KEFB_SALPK Glutathione-regulated potassium-efflux system protein KefB OS=Salmonella paratyphi A (strain AKU_12601) GN=kefB PE=3 SV=1 Back     alignment and function description
>sp|C0Q0D3|KEFB_SALPC Glutathione-regulated potassium-efflux system protein KefB OS=Salmonella paratyphi C (strain RKS4594) GN=kefB PE=3 SV=1 Back     alignment and function description
>sp|Q5PL21|KEFB_SALPA Glutathione-regulated potassium-efflux system protein KefB OS=Salmonella paratyphi A (strain ATCC 9150 / SARB42) GN=kefB PE=3 SV=1 Back     alignment and function description
>sp|Q57J15|KEFB_SALCH Glutathione-regulated potassium-efflux system protein KefB OS=Salmonella choleraesuis (strain SC-B67) GN=kefB PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query465
356561749 576 PREDICTED: K(+) efflux antiporter 5-like 0.913 0.737 0.781 0.0
225455594 577 PREDICTED: K(+) efflux antiporter 5 [Vit 0.913 0.736 0.792 0.0
356529340 576 PREDICTED: K(+) efflux antiporter 5-like 0.913 0.737 0.784 0.0
224120182 580 potassium efflux antiporter [Populus tri 0.909 0.729 0.766 0.0
449460782 578 PREDICTED: K(+) efflux antiporter 5-like 0.907 0.730 0.767 0.0
186531286565 K(+) efflux antiporter 5 [Arabidopsis th 0.911 0.750 0.753 0.0
18423310 568 K(+) efflux antiporter 5 [Arabidopsis th 0.907 0.742 0.753 0.0
297795979 569 hypothetical protein ARALYDRAFT_495238 [ 0.907 0.741 0.751 0.0
255539661565 Glutathione-regulated potassium-efflux s 0.903 0.743 0.778 0.0
224136838525 potassium efflux antiporter [Populus tri 0.886 0.784 0.761 0.0
>gi|356561749|ref|XP_003549141.1| PREDICTED: K(+) efflux antiporter 5-like [Glycine max] Back     alignment and taxonomy information
 Score =  710 bits (1832), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/477 (78%), Positives = 401/477 (84%), Gaps = 52/477 (10%)

Query: 36  DFQAVLETVAKITHEKMKRNDTQEANGTRPFQFQDVFFSDQEDSDDEMTLIDKKDNVFVM 95
           D QAVLETVAKITH+K KRN+T E N TR FQFQDVF  + EDSDD  TLIDKKDNVFVM
Sbjct: 91  DQQAVLETVAKITHDKAKRNETHEGNATRAFQFQDVFSLENEDSDDVTTLIDKKDNVFVM 150

Query: 96  SNKKSKYPVLQVDLRLISDLVVVIVSAAIGGIIFSCLGQPVIVGYLLAGSIIGPGGLKFI 155
           SNKKSKYPVLQVDLRLISDLVVVIVSAAIGGI+FSCLGQPVIVGYLLAGS+IGPGGLKFI
Sbjct: 151 SNKKSKYPVLQVDLRLISDLVVVIVSAAIGGIVFSCLGQPVIVGYLLAGSLIGPGGLKFI 210

Query: 156 SELVQ----------------------------------------------------LCG 163
           SE+VQ                                                    L G
Sbjct: 211 SEMVQVETVAQFGVVFLLFALGLEFSLAKLKAVGPVAVLGGLLQIIIFMFMCGILSMLFG 270

Query: 164 AKLSEGVFVGSFLSMSSTAVVVKFLVEQNSNNALHGQVTIGTLILQDCAVGLLFALLPVL 223
           AKLSEGVFVGSFLSMSSTAVVVKFLVE+NSNNALH QVTIGTLI QDCAVGLLFALLPVL
Sbjct: 271 AKLSEGVFVGSFLSMSSTAVVVKFLVERNSNNALHVQVTIGTLIFQDCAVGLLFALLPVL 330

Query: 224 GGNSGLLQGMVSMGKLLLVLSIYLTVTSILSWSFVPRFLKLMIQLSSQTNELYQLAAVAF 283
           GGNSGLLQG++SMGKLLLVLS+Y+T TS+LSW+FVPRFLKLM++LSSQTNELYQLAAVAF
Sbjct: 331 GGNSGLLQGLMSMGKLLLVLSLYITATSVLSWTFVPRFLKLMMRLSSQTNELYQLAAVAF 390

Query: 284 CLLSAWCSDKLGLSLELGSFMAGVMISTTDFAKHTLDQVEPIRNLFAALFLSSIGMLIHV 343
           CLLSAWCSDKLGLSLELGSFMAGVMISTTDFA+HTLDQVEPIRNLFAALFLSSIGMLIHV
Sbjct: 391 CLLSAWCSDKLGLSLELGSFMAGVMISTTDFAQHTLDQVEPIRNLFAALFLSSIGMLIHV 450

Query: 344 HFLWNHVDILLASVILVIIVKTAVGTIVTKLFGYSMRTSFLVGVSLAQIGEFAFVLLSRA 403
           HFLWNHVDILLASVILV++VKTAV  IVTK FGYS++TSF+VG+SLAQIGEFAFVLLSRA
Sbjct: 451 HFLWNHVDILLASVILVVVVKTAVAVIVTKAFGYSLKTSFIVGISLAQIGEFAFVLLSRA 510

Query: 404 SNLHLVEGKMYLLLLGTTALSLVTTPLLFKLIPNVMNLGILLHWFPSEGTPRSEASS 460
           SNLHLVEGKMYLLLLGTTALSLVTTPLLFKLIP VMNLG+L+HWFP+E + + E  +
Sbjct: 511 SNLHLVEGKMYLLLLGTTALSLVTTPLLFKLIPAVMNLGVLMHWFPNESSTQIEGKT 567

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225455594|ref|XP_002269354.1| PREDICTED: K(+) efflux antiporter 5 [Vitis vinifera] gi|296084106|emb|CBI24494.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356529340|ref|XP_003533253.1| PREDICTED: K(+) efflux antiporter 5-like [Glycine max] Back     alignment and taxonomy information
>gi|224120182|ref|XP_002318266.1| potassium efflux antiporter [Populus trichocarpa] gi|222858939|gb|EEE96486.1| potassium efflux antiporter [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449460782|ref|XP_004148124.1| PREDICTED: K(+) efflux antiporter 5-like [Cucumis sativus] gi|449499664|ref|XP_004160879.1| PREDICTED: K(+) efflux antiporter 5-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|186531286|ref|NP_001119415.1| K(+) efflux antiporter 5 [Arabidopsis thaliana] gi|332008735|gb|AED96118.1| K(+) efflux antiporter 5 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|18423310|ref|NP_568763.1| K(+) efflux antiporter 5 [Arabidopsis thaliana] gi|75304451|sp|Q8VYR9.1|KEA5_ARATH RecName: Full=K(+) efflux antiporter 5; Short=AtKEA5 gi|17979127|gb|AAL49821.1| putative potassium/proton antiporter protein [Arabidopsis thaliana] gi|21537045|gb|AAM61386.1| potassium/proton antiporter-like protein [Arabidopsis thaliana] gi|332008734|gb|AED96117.1| K(+) efflux antiporter 5 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297795979|ref|XP_002865874.1| hypothetical protein ARALYDRAFT_495238 [Arabidopsis lyrata subsp. lyrata] gi|297311709|gb|EFH42133.1| hypothetical protein ARALYDRAFT_495238 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|255539661|ref|XP_002510895.1| Glutathione-regulated potassium-efflux system protein kefB, putative [Ricinus communis] gi|223550010|gb|EEF51497.1| Glutathione-regulated potassium-efflux system protein kefB, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224136838|ref|XP_002322428.1| potassium efflux antiporter [Populus trichocarpa] gi|222869424|gb|EEF06555.1| potassium efflux antiporter [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query465
TAIR|locus:2165326568 KEA5 "K+ efflux antiporter 5" 0.640 0.524 0.755 1.2e-164
TAIR|locus:2181910597 KEA6 "K+ efflux antiporter 6" 0.634 0.494 0.677 1.4e-135
TAIR|locus:2050382592 KEA4 "K+ efflux antiporter 4" 0.630 0.494 0.687 4.7e-133
TIGR_CMR|DET_1627 567 DET_1627 "sodium/hydrogen exch 0.554 0.455 0.330 3.5e-32
UNIPROTKB|A5D7N7677 TMCO3 "Uncharacterized protein 0.572 0.392 0.284 5e-29
UNIPROTKB|F1RN34678 TMCO3 "Uncharacterized protein 0.574 0.393 0.289 1.2e-28
UNIPROTKB|P45522 601 kefB [Escherichia coli K-12 (t 0.610 0.472 0.302 1.2e-27
MGI|MGI:2444946678 Tmco3 "transmembrane and coile 0.572 0.392 0.262 4e-27
TIGR_CMR|CPS_1593 655 CPS_1593 "putative glutathione 0.516 0.366 0.306 2e-26
UNIPROTKB|E1BT78678 TMCO3 "Uncharacterized protein 0.572 0.392 0.270 3.6e-26
TAIR|locus:2165326 KEA5 "K+ efflux antiporter 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1148 (409.2 bits), Expect = 1.2e-164, Sum P(2) = 1.2e-164
 Identities = 225/298 (75%), Positives = 252/298 (84%)

Query:   161 LCGAKLSEGVFVGSFLSMSSTAVVVKFLVEQNSNNALHGQVTIGTLILQDCAVGLLFALL 220
             LCGA+LSEG+FVG+FLSMSSTAVVVKFLVE+NS ++LHGQVTIG LI QDC VGLLFALL
Sbjct:   256 LCGARLSEGIFVGAFLSMSSTAVVVKFLVERNSTSSLHGQVTIGILIFQDCVVGLLFALL 315

Query:   221 PVLGGNSGLLQGMVSMGKLLLVLSIYLTVTSILSWSFVPRFLKLMIQLSSQTNELYQLAA 280
             PVLGGNSGLLQG++SMGKLLL+LSIYLTV S+L+WSFVPRFLKLMIQLSSQTNELYQLAA
Sbjct:   316 PVLGGNSGLLQGIISMGKLLLILSIYLTVASLLTWSFVPRFLKLMIQLSSQTNELYQLAA 375

Query:   281 VAFCLLSAWCSDKLGLSLELGSFMAGVMISTTDFAKHTLDQVEPIRNLFAALFLSSIGML 340
             VAFCLLSAWCSDKLGLSLELGSF+AGVM+STT+FA+HTL+QVEPIRNLFAALFLSSIGML
Sbjct:   376 VAFCLLSAWCSDKLGLSLELGSFVAGVMLSTTEFAQHTLEQVEPIRNLFAALFLSSIGML 435

Query:   341 IHVHFLWNHXXXXXXXXXXXXXXKTAVGTIVTKLFGYSMRTSFLVGVSLAQIGEFAFVLL 400
             I+VHFLWNH              KTA+  +V K F Y+MR SF VGV LAQIGEFAFVLL
Sbjct:   436 INVHFLWNHVDILLASVILVIVIKTAIAAVVVKAFRYNMRISFHVGVLLAQIGEFAFVLL 495

Query:   401 SRASNLHLVEGKMYXXXXXXXXXXXXXXPLLFKLIPNVMNLGILLHWFPSEGTPRSEA 458
             SRASNLH++EGKMY              PLLFKLIP+ MNLG+LL WFPSE +  +E+
Sbjct:   496 SRASNLHVIEGKMYLLLLGTTALSLVTTPLLFKLIPSAMNLGVLLRWFPSENSSPNES 553
GO:0006812 "cation transport" evidence=IEA
GO:0006813 "potassium ion transport" evidence=ISS
GO:0015079 "potassium ion transmembrane transporter activity" evidence=ISS
GO:0015299 "solute:hydrogen antiporter activity" evidence=IEA
GO:0015386 "potassium:hydrogen antiporter activity" evidence=ISS;NAS
GO:0016021 "integral to membrane" evidence=IEA
GO:0055085 "transmembrane transport" evidence=IEA
GO:0006814 "sodium ion transport" evidence=RCA
GO:0010351 "lithium ion transport" evidence=RCA
TAIR|locus:2181910 KEA6 "K+ efflux antiporter 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2050382 KEA4 "K+ efflux antiporter 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|DET_1627 DET_1627 "sodium/hydrogen exchanger family protein" [Dehalococcoides ethenogenes 195 (taxid:243164)] Back     alignment and assigned GO terms
UNIPROTKB|A5D7N7 TMCO3 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1RN34 TMCO3 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|P45522 kefB [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
MGI|MGI:2444946 Tmco3 "transmembrane and coiled-coil domains 3" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
TIGR_CMR|CPS_1593 CPS_1593 "putative glutathione-regulated potassium-efflux system protein" [Colwellia psychrerythraea 34H (taxid:167879)] Back     alignment and assigned GO terms
UNIPROTKB|E1BT78 TMCO3 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8VYR9KEA5_ARATHNo assigned EC number0.75360.90750.7429yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00038503001
SubName- Full=Chromosome chr16 scaffold_94, whole genome shotgun sequence; (584 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query465
pfam00999370 pfam00999, Na_H_Exchanger, Sodium/hydrogen exchang 6e-49
COG0475397 COG0475, KefB, Kef-type K+ transport systems, memb 7e-47
PRK03659 601 PRK03659, PRK03659, glutathione-regulated potassiu 3e-35
COG4651408 COG4651, RosB, Kef-type K+ transport system, predi 8e-35
PRK10669 558 PRK10669, PRK10669, putative cation:proton antipor 5e-33
TIGR00932273 TIGR00932, 2a37, transporter, monovalent cation:pr 9e-28
PRK03562 621 PRK03562, PRK03562, glutathione-regulated potassiu 9e-26
pfam00999370 pfam00999, Na_H_Exchanger, Sodium/hydrogen exchang 4e-05
>gnl|CDD|216235 pfam00999, Na_H_Exchanger, Sodium/hydrogen exchanger family Back     alignment and domain information 
 Score =  171 bits (435), Expect = 6e-49
 Identities = 93/331 (28%), Positives = 163/331 (49%), Gaps = 26/331 (7%)

Query: 105 LQVDLRLISDLVVVIVSAAIGGIIFSCLGQPVIVGYLLAGSIIGPGGLKFISELVQLCGA 164
           L++DLR +      I+  A+ G++      P ++G LLA              L+   G 
Sbjct: 64  LELDLRELRKNGKSILLLALLGVLI-----PFLLGLLLA--------------LLGGLGI 104

Query: 165 KLSEGVFVGSFLSMSSTAVVVKFLVEQNSNNALHGQVTIGTLILQDCAVGLLFALLPVLG 224
            L E +  G+ LS +S  VV+  L E+   N   G + +G  +L D    +L A+L  L 
Sbjct: 105 PLLEALLFGAALSATSPVVVLAILKERGRLNTRLGTLILGESVLNDAVAVVLLAVLLALA 164

Query: 225 GNSGLLQGMVSMGKLLLVLSIYLTVTSILSWSFVPRFLKLMIQLSSQTNELYQLAAVAFC 284
           G  GL     S   LLL++ + + +  +L        L+L+ + +S   EL  L  +A  
Sbjct: 165 GVGGL-----SDLGLLLLIFLVVALGGLLLGLVFGWLLRLITRFTSGDRELEVLLVLALA 219

Query: 285 LLSAWCSDKLGLSLELGSFMAGVMISTTDFAKHTLDQVEPIRN-LFAALFLSSIGMLIHV 343
           LL+A  ++ LGLS  LG+F+AG+++S   FA    +++EP    LF  LF  S+G+ + +
Sbjct: 220 LLAALLAELLGLSGILGAFLAGLVLSNYAFANELSEKLEPFGYGLFLPLFFVSVGLSLDL 279

Query: 344 H-FLWNHVDILLASVILVIIVKTAVGTIVTKLFGYSMRTSFLVGVSLAQIGEFAFVLLSR 402
              L + + ++L  ++ +++ K     ++ +L G S+R + +VG    Q G  +  L + 
Sbjct: 280 SSLLLSLLLLVLLLLVAILLGKLLGVFLLARLLGLSLREALIVGFGGLQRGAVSLALAAI 339

Query: 403 ASNLHLVEGKMYLLLLGTTALSLVTTPLLFK 433
              L L++ ++Y LL+    L+ +  PLL K
Sbjct: 340 GLQLGLIDRELYTLLVAVVLLTTLLKPLLKK 370

Na/H antiporters are key transporters in maintaining the pH of actively metabolising cells. The molecular mechanisms of antiport are unclear. These antiporters contain 10-12 transmembrane regions (M) at the amino-terminus and a large cytoplasmic region at the carboxyl terminus. The transmembrane regions M3-M12 share identity with other members of the family. The M6 and M7 regions are highly conserved. Thus, this is thought to be the region that is involved in the transport of sodium and hydrogen ions. The cytoplasmic region has little similarity throughout the family. Length = 370
>gnl|CDD|223551 COG0475, KefB, Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|179625 PRK03659, PRK03659, glutathione-regulated potassium-efflux system protein KefB; Provisional Back     alignment and domain information
>gnl|CDD|226998 COG4651, RosB, Kef-type K+ transport system, predicted NAD-binding component [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|182633 PRK10669, PRK10669, putative cation:proton antiport protein; Provisional Back     alignment and domain information
>gnl|CDD|233195 TIGR00932, 2a37, transporter, monovalent cation:proton antiporter-2 (CPA2) family Back     alignment and domain information
>gnl|CDD|235131 PRK03562, PRK03562, glutathione-regulated potassium-efflux system protein KefC; Provisional Back     alignment and domain information
>gnl|CDD|216235 pfam00999, Na_H_Exchanger, Sodium/hydrogen exchanger family Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 465
PRK03562 621 glutathione-regulated potassium-efflux system prot 100.0
PRK10669 558 putative cation:proton antiport protein; Provision 100.0
PLN03159 832 cation/H(+) antiporter 15; Provisional 100.0
PRK03659 601 glutathione-regulated potassium-efflux system prot 100.0
COG0475397 KefB Kef-type K+ transport systems, membrane compo 100.0
COG4651408 RosB Kef-type K+ transport system, predicted NAD-b 100.0
PRK05326 562 potassium/proton antiporter; Reviewed 100.0
KOG1650 769 consensus Predicted K+/H+-antiporter [Inorganic io 100.0
PF00999380 Na_H_Exchanger: Sodium/hydrogen exchanger family; 99.97
TIGR00932273 2a37 transporter, monovalent cation:proton antipor 99.96
TIGR00844 810 c_cpa1 na(+)/h(+) antiporter. This model is specif 99.87
TIGR00831525 a_cpa1 Na+/H+ antiporter, bacterial form. This mod 99.86
COG3263 574 NhaP-type Na+/H+ and K+/H+ antiporters with a uniq 99.81
COG0025429 NhaP NhaP-type Na+/H+ and K+/H+ antiporters [Inorg 99.81
TIGR00840 559 b_cpa1 sodium/hydrogen exchanger 3. This model is 99.75
PRK14853423 nhaA pH-dependent sodium/proton antiporter; Provis 99.51
KOG1965575 consensus Sodium/hydrogen exchanger protein [Inorg 99.26
KOG4505467 consensus Na+/H+ antiporter [Inorganic ion transpo 99.1
TIGR00773373 NhaA Na+/H+ antiporter NhaA. These proteins are me 99.01
PRK14856438 nhaA pH-dependent sodium/proton antiporter; Provis 98.58
PRK09560389 nhaA pH-dependent sodium/proton antiporter; Review 98.34
PRK14854383 nhaA pH-dependent sodium/proton antiporter; Provis 98.32
PRK09561388 nhaA pH-dependent sodium/proton antiporter; Review 98.32
PRK14855423 nhaA pH-dependent sodium/proton antiporter; Provis 98.32
COG3004390 NhaA Na+/H+ antiporter [Inorganic ion transport an 97.99
PF06965378 Na_H_antiport_1: Na+/H+ antiporter 1; InterPro: IP 97.91
TIGR00932273 2a37 transporter, monovalent cation:proton antipor 97.37
PRK12460312 2-keto-3-deoxygluconate permease; Provisional 97.25
PRK03562 621 glutathione-regulated potassium-efflux system prot 97.16
COG0475 397 KefB Kef-type K+ transport systems, membrane compo 96.96
PRK10669 558 putative cation:proton antiport protein; Provision 96.92
PRK03659 601 glutathione-regulated potassium-efflux system prot 96.81
KOG1966 670 consensus Sodium/hydrogen exchanger protein [Inorg 96.71
PRK05326 562 potassium/proton antiporter; Reviewed 96.5
PLN03159 832 cation/H(+) antiporter 15; Provisional 96.14
PF03601 305 Cons_hypoth698: Conserved hypothetical protein 698 96.03
COG0786404 GltS Na+/glutamate symporter [Amino acid transport 95.45
TIGR00831 525 a_cpa1 Na+/H+ antiporter, bacterial form. This mod 95.37
COG2855 334 Predicted membrane protein [Function unknown] 95.32
TIGR00698 335 conserved hypothetical integral membrane protein. 95.1
PF03812314 KdgT: 2-keto-3-deoxygluconate permease; InterPro: 94.54
PF05684378 DUF819: Protein of unknown function (DUF819); Inte 94.46
TIGR00793314 kdgT 2-keto-3-deoxygluconate transporter. This fam 94.36
TIGR00844 810 c_cpa1 na(+)/h(+) antiporter. This model is specif 93.95
PF03956191 DUF340: Membrane protein of unknown function (DUF3 93.87
PRK05274326 2-keto-3-deoxygluconate permease; Provisional 93.58
TIGR00946321 2a69 he Auxin Efflux Carrier (AEC) Family. 92.39
TIGR03082156 Gneg_AbrB_dup membrane protein AbrB duplication. T 91.61
PF00999 380 Na_H_Exchanger: Sodium/hydrogen exchanger family; 90.24
PF05145318 AmoA: Putative ammonia monooxygenase; InterPro: IP 88.93
TIGR00783347 ccs citrate carrier protein, CCS family. These pro 88.89
COG4651 408 RosB Kef-type K+ transport system, predicted NAD-b 87.88
COG3180352 AbrB Putative ammonia monooxygenase [General funct 87.82
COG0786 404 GltS Na+/glutamate symporter [Amino acid transport 86.75
COG0025 429 NhaP NhaP-type Na+/H+ and K+/H+ antiporters [Inorg 86.61
COG3180 352 AbrB Putative ammonia monooxygenase [General funct 86.28
TIGR03802 562 Asp_Ala_antiprt aspartate-alanine antiporter. All 86.13
PF03616368 Glt_symporter: Sodium/glutamate symporter; InterPr 85.75
PRK09903314 putative transporter YfdV; Provisional 85.73
COG1346230 LrgB Putative effector of murein hydrolase [Cell e 84.78
TIGR00210 398 gltS sodium--glutamate symport carrier (gltS). 82.43
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional Back     alignment and domain information 
Probab=100.00  E-value=8e-46  Score=405.10  Aligned_cols=330  Identities=25%  Similarity=0.395  Sum_probs=290.1

Q ss_pred             hcHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHhCcCCccchHhH------HH--------------------
Q 012343          107 VDLRLISDLVVVIVSAAIGGIIFSCLGQPVIVGYLLAGSIIGPGGLKFISEL------VQ--------------------  160 (465)
Q Consensus       107 ~d~~li~~l~iil~~a~i~g~l~~rl~lP~ivG~IlaGiiLGPsgL~~I~~~------~q--------------------  160 (465)
                      +|+.++.++.+++..+.+++.+++|+|+|+++|||++|+++||+++|++++.      .|                    
T Consensus         2 ~~~~~l~~~~~~l~~a~i~~~l~~rl~lp~vlgyilaGillGP~~lg~i~~~~~i~~laelGvv~LlF~iGLEl~~~~l~   81 (621)
T PRK03562          2 MDSHTLIQALIYLGAAVLIVPIAVRLGLGSVLGYLIAGCIIGPWGLRLVTDVESILHFAEFGVVLMLFVIGLELDPQRLW   81 (621)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHhCcccccCCCCHHHHHHHHHHHHHHHHHHHHhCcCHHHHH
Confidence            4678999999999999999999999999999999999999999999987531      11                    


Q ss_pred             --------------------------HhcCchHHHHHHHHHHhhccHHHHHHHHhhcccCCcchHHHHHHHHHHHHHHHH
Q 012343          161 --------------------------LCGAKLSEGVFVGSFLSMSSTAVVVKFLVEQNSNNALHGQVTIGTLILQDCAVG  214 (465)
Q Consensus       161 --------------------------l~G~~~~~al~ig~~ls~TS~~vv~~iL~e~~~l~s~~g~i~l~~avl~Dv~~~  214 (465)
                                                ++|+++..++++|.+++.|||++++++++|++..++++||.+++.+++||+.++
T Consensus        82 ~~~~~~~~~g~~qv~~~~~~~~~~~~~~g~~~~~al~ig~~la~SStaiv~~~L~e~~~l~t~~G~~~l~~ll~~Dl~~i  161 (621)
T PRK03562         82 KLRRSIFGGGALQMVACGGLLGLFCMLLGLRWQVALLIGLGLALSSTAIAMQAMNERNLMVTQMGRSAFAILLFQDIAAI  161 (621)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccccCchHHHHHHHHHHHHHHHH
Confidence                                      457889999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHh
Q 012343          215 LLFALLPVLGGNSGLLQGMVSMGKLLLVLSIYLTVTSILSWSFVPRFLKLMIQLSSQTNELYQLAAVAFCLLSAWCSDKL  294 (465)
Q Consensus       215 ll~al~~~l~~~~~~~~~~~sl~~~ll~l~~f~lv~~vv~~~v~~~l~~~l~~~~~~~~e~~~l~~lal~~~~~~iae~l  294 (465)
                      +++++++.+...+... +........+..++++++.++.+||+.+++++++.+  .+.+|.+...++.++++++++++.+
T Consensus       162 ~ll~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~l~~~l~~~~~~--~~~~e~~~~~~l~lv~~~a~la~~~  238 (621)
T PRK03562        162 PLVAMIPLLAASGAST-TLGAFALSALKVAGALALVVLGGRYVTRPALRFVAR--SGLREVFTAVALFLVFGFGLLMEEV  238 (621)
T ss_pred             HHHHHHHHHccCCCcc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hCCchHHHHHHHHHHHHHHHHHHHh
Confidence            9999888776432110 111112222333344445566788999999999876  3578988888889999999999999


Q ss_pred             CchHHHHHHHHHHHhcCCcchhhHHHhhhcHHHHHHHHHHHHhcchhhHhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012343          295 GLSLELGSFMAGVMISTTDFAKHTLDQVEPIRNLFAALFLSSIGMLIHVHFLWNHVDILLASVILVIIVKTAVGTIVTKL  374 (465)
Q Consensus       295 Gls~~lGaFlaGl~is~~~~~~~l~~~ie~i~~~f~piFF~~iGl~i~~~~l~~~~~~~l~l~~~~vl~K~v~~~l~~~~  374 (465)
                      |+|+++|||+||++++++++++++.++++|++++|+|+||+++|+++|+..+..+++.++.+++..+++|++++++.+++
T Consensus       239 Gls~~lGAFlAGl~l~~~~~~~~le~~i~pf~~lll~lFFi~vG~~id~~~l~~~~~~il~~~~~~~~~K~~~~~~~~~~  318 (621)
T PRK03562        239 GLSMALGAFLAGVLLASSEYRHALESDIEPFKGLLLGLFFIAVGMSIDFGTLLENPLRILILLLGFLAIKIAMLWLLARP  318 (621)
T ss_pred             CccHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999988777777777778899999999999999


Q ss_pred             hCCChHHHHHHHHHHhhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 012343          375 FGYSMRTSFLVGVSLAQIGEFAFVLLSRASNLHLVEGKMYLLLLGTTALSLVTTPLLFKLIPNVM  439 (465)
Q Consensus       375 ~g~~~~~a~~vgl~L~~~Ge~slvla~~a~~~giis~~~~~~ll~~v~lS~i~~Pll~r~~~~~~  439 (465)
                      +|+++++++.+|++|+|+|||++++++.|.+.|+++++.|+.++.++++|++++|++.+++++..
T Consensus       319 ~g~~~~~a~~~gl~L~~~Gef~~vl~~~a~~~~~i~~~~~~~lv~~v~lS~~~tP~l~~~~~~~~  383 (621)
T PRK03562        319 LGVPRKQRRWFAVLLGQGGEFAFVVFGAAQMANVLEPEWAKLLTLAVALSMAATPLLLVLLDRLE  383 (621)
T ss_pred             hCCCHhHHHHHHHHHhccccHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence            99999999999999999999999999999999999999999999999999999999999887764

>PRK10669 putative cation:proton antiport protein; Provisional Back     alignment and domain information
>PLN03159 cation/H(+) antiporter 15; Provisional Back     alignment and domain information
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional Back     alignment and domain information
>COG0475 KefB Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG4651 RosB Kef-type K+ transport system, predicted NAD-binding component [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK05326 potassium/proton antiporter; Reviewed Back     alignment and domain information
>KOG1650 consensus Predicted K+/H+-antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF00999 Na_H_Exchanger: Sodium/hydrogen exchanger family; InterPro: IPR006153 Sodium proton exchangers (NHEs) constitute a large family of integral membrane protein transporters that are responsible for the counter-transport of protons and sodium ions across lipid bilayers [, ] Back     alignment and domain information
>TIGR00932 2a37 transporter, monovalent cation:proton antiporter-2 (CPA2) family Back     alignment and domain information
>TIGR00844 c_cpa1 na(+)/h(+) antiporter Back     alignment and domain information
>TIGR00831 a_cpa1 Na+/H+ antiporter, bacterial form Back     alignment and domain information
>COG3263 NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG0025 NhaP NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00840 b_cpa1 sodium/hydrogen exchanger 3 Back     alignment and domain information
>PRK14853 nhaA pH-dependent sodium/proton antiporter; Provisional Back     alignment and domain information
>KOG1965 consensus Sodium/hydrogen exchanger protein [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG4505 consensus Na+/H+ antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00773 NhaA Na+/H+ antiporter NhaA Back     alignment and domain information
>PRK14856 nhaA pH-dependent sodium/proton antiporter; Provisional Back     alignment and domain information
>PRK09560 nhaA pH-dependent sodium/proton antiporter; Reviewed Back     alignment and domain information
>PRK14854 nhaA pH-dependent sodium/proton antiporter; Provisional Back     alignment and domain information
>PRK09561 nhaA pH-dependent sodium/proton antiporter; Reviewed Back     alignment and domain information
>PRK14855 nhaA pH-dependent sodium/proton antiporter; Provisional Back     alignment and domain information
>COG3004 NhaA Na+/H+ antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF06965 Na_H_antiport_1: Na+/H+ antiporter 1; InterPro: IPR004670 NhaA is a sodium ion/proton antiporter that uses the proton electrochemical gradient to expel sodium ions from the cytoplasm and functions primarily in the adaptation to high salinity at alkaline pH Back     alignment and domain information
>TIGR00932 2a37 transporter, monovalent cation:proton antiporter-2 (CPA2) family Back     alignment and domain information
>PRK12460 2-keto-3-deoxygluconate permease; Provisional Back     alignment and domain information
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional Back     alignment and domain information
>COG0475 KefB Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK10669 putative cation:proton antiport protein; Provisional Back     alignment and domain information
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional Back     alignment and domain information
>KOG1966 consensus Sodium/hydrogen exchanger protein [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK05326 potassium/proton antiporter; Reviewed Back     alignment and domain information
>PLN03159 cation/H(+) antiporter 15; Provisional Back     alignment and domain information
>PF03601 Cons_hypoth698: Conserved hypothetical protein 698; InterPro: IPR018383 This entry represents a family of uncharacterised multi-pass membrane proteins Back     alignment and domain information
>COG0786 GltS Na+/glutamate symporter [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR00831 a_cpa1 Na+/H+ antiporter, bacterial form Back     alignment and domain information
>COG2855 Predicted membrane protein [Function unknown] Back     alignment and domain information
>TIGR00698 conserved hypothetical integral membrane protein Back     alignment and domain information
>PF03812 KdgT: 2-keto-3-deoxygluconate permease; InterPro: IPR004684 This family includes the characterised 2-Keto-3-Deoxygluconate transporters from Bacillus subtilis and Erwinia chrysanthemi Back     alignment and domain information
>PF05684 DUF819: Protein of unknown function (DUF819); InterPro: IPR008537 This family contains proteins of unknown function from archaeal, bacterial and plant species Back     alignment and domain information
>TIGR00793 kdgT 2-keto-3-deoxygluconate transporter Back     alignment and domain information
>TIGR00844 c_cpa1 na(+)/h(+) antiporter Back     alignment and domain information
>PF03956 DUF340: Membrane protein of unknown function (DUF340); InterPro: IPR005642 Members of this family contain a conserved core of four predicted transmembrane segments Back     alignment and domain information
>PRK05274 2-keto-3-deoxygluconate permease; Provisional Back     alignment and domain information
>TIGR00946 2a69 he Auxin Efflux Carrier (AEC) Family Back     alignment and domain information
>TIGR03082 Gneg_AbrB_dup membrane protein AbrB duplication Back     alignment and domain information
>PF00999 Na_H_Exchanger: Sodium/hydrogen exchanger family; InterPro: IPR006153 Sodium proton exchangers (NHEs) constitute a large family of integral membrane protein transporters that are responsible for the counter-transport of protons and sodium ions across lipid bilayers [, ] Back     alignment and domain information
>PF05145 AmoA: Putative ammonia monooxygenase; InterPro: IPR007820 This family contains sequences annotated as ammonia monooxygenase Back     alignment and domain information
>TIGR00783 ccs citrate carrier protein, CCS family Back     alignment and domain information
>COG4651 RosB Kef-type K+ transport system, predicted NAD-binding component [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG3180 AbrB Putative ammonia monooxygenase [General function prediction only] Back     alignment and domain information
>COG0786 GltS Na+/glutamate symporter [Amino acid transport and metabolism] Back     alignment and domain information
>COG0025 NhaP NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG3180 AbrB Putative ammonia monooxygenase [General function prediction only] Back     alignment and domain information
>TIGR03802 Asp_Ala_antiprt aspartate-alanine antiporter Back     alignment and domain information
>PF03616 Glt_symporter: Sodium/glutamate symporter; InterPro: IPR004445 This is a family of sodium/glutamate symporters (glutamate permeases), which catalyse the sodium-dependent uptake of extracellular glutamate Back     alignment and domain information
>PRK09903 putative transporter YfdV; Provisional Back     alignment and domain information
>COG1346 LrgB Putative effector of murein hydrolase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>TIGR00210 gltS sodium--glutamate symport carrier (gltS) Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query465
1zcd_A388 Na(+)/H(+) antiporter 1; membrane protein; 3.45A { 99.7
3zux_A332 Transporter, ASBTNM; transport protein, membrane p 87.28
>1zcd_A Na(+)/H(+) antiporter 1; membrane protein; 3.45A {Escherichia coli} PDB: 3fi1_A Back     alignment and structure
Probab=99.70  E-value=4.8e-17  Score=166.82  Aligned_cols=247  Identities=17%  Similarity=0.094  Sum_probs=177.5

Q ss_pred             hcCchHHHHHHHHHHhhccHHHHHHHHhhcccCCc-chHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHH
Q 012343          162 CGAKLSEGVFVGSFLSMSSTAVVVKFLVEQNSNNA-LHGQVTIGTLILQDCAVGLLFALLPVLGGNSGLLQGMVSMGKLL  240 (465)
Q Consensus       162 ~G~~~~~al~ig~~ls~TS~~vv~~iL~e~~~l~s-~~g~i~l~~avl~Dv~~~ll~al~~~l~~~~~~~~~~~sl~~~l  240 (465)
                      ++....++.....+..+|+.+....++...+...+ ..++.+++.+++||+.++++++++.   +++  . ....+.   
T Consensus       115 ~~~~~~~~~~gw~ip~ATdIAfal~vL~~lg~~~p~~l~~flLalAvvDDl~aiivIAvfy---t~~--~-~~~~l~---  185 (388)
T 1zcd_A          115 FNYADPITREGWAIPAATDIAFALGVLALLGSRVPLALKIFLMALAIIDDLGAIIIIALFY---TND--L-SMASLG---  185 (388)
T ss_dssp             GCCSSTTHHHHTSSSSCCCHHHHHHHHHSSCSSSCSSSHHHHHHHHHHHHHHHHHHHHHHS---CCC--C-CHHHHH---
T ss_pred             HhcCChhhhhhhHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHHHH---cCC--c-cHHHHH---
Confidence            34444556777888899999999999999875544 4568999999999999999998763   111  1 112211   


Q ss_pred             HHHHHHHHHHHHHHhhHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHhcCC-----cch
Q 012343          241 LVLSIYLTVTSILSWSFVPRFLKLMIQLSSQTNELYQLAAVAFCLLSAWCSDKLGLSLELGSFMAGVMISTT-----DFA  315 (465)
Q Consensus       241 l~l~~f~lv~~vv~~~v~~~l~~~l~~~~~~~~e~~~l~~lal~~~~~~iae~lGls~~lGaFlaGl~is~~-----~~~  315 (465)
                      . .++++++.         +++++.     ..++......+  ++...+.++..|+|+.+|+|++|+++|..     +..
T Consensus       186 ~-~~~~~~~~---------~~l~r~-----~v~~~~~y~~l--gl~~w~~~~~sGvHatigg~l~Gl~ip~~~~~~~~~~  248 (388)
T 1zcd_A          186 V-AAVAIAVL---------AVLNLC-----GARRTGVYILV--GVVLWTAVLKSGVHATLAGVIVGFFIPLKEKHGRSPA  248 (388)
T ss_dssp             H-HHHHHHHH---------HHHHHT-----TCCCTHHHHHH--HHHHHHHTTTSHHHHHHHHHHHHHHSCCCGGGSSCHH
T ss_pred             H-HHHHHHHH---------HHHHHh-----cchhHHHHHHH--HHHHHHHHHHhCccHHHHHHHHHHhccCCCccCCCHH
Confidence            1 11111111         111221     12222222222  33444566999999999999999999985     346


Q ss_pred             hhHHHhhhcHH-HHHHHHH-HHHhcchhhHh---hHhHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------CCChH
Q 012343          316 KHTLDQVEPIR-NLFAALF-LSSIGMLIHVH---FLWNHVDILLASVILVIIVKTAVGTIVTKLF----------GYSMR  380 (465)
Q Consensus       316 ~~l~~~ie~i~-~~f~piF-F~~iGl~i~~~---~l~~~~~~~l~l~~~~vl~K~v~~~l~~~~~----------g~~~~  380 (465)
                      ++++|+++|+. .+++|+| |++.|.++|..   .+.+ . ..+.+++..+++|+++++..++..          |.+++
T Consensus       249 ~~le~~l~p~v~~~ilPlFaFanaGv~l~~~~~~~l~~-~-~~lgi~~glvvGK~~Gi~~~~~l~~rl~~~~lp~g~~~~  326 (388)
T 1zcd_A          249 KRLEHVLHPWVAYLILPLFAFANAGVSLQGVTLDGLTS-I-LPLGIIAGLLIGKPLGISLFCWLALRLKLAHLPEGTTYQ  326 (388)
T ss_dssp             HHHHHHHHHHHHHTHHHHHHHHHCCCCCSSSCCCTHHH-H-SSTTTTHHHHHTTGGGSTTHHHHTSSCTTTCCCCSCCGG
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCeeecccchhhccC-h-HHHHHHHHHHHHHHHHHHHHHHHHHHhccCcCCCCCCHH
Confidence            78999999998 4889999 99999999974   2322 1 123444556899999955555554          89999


Q ss_pred             HHHHHHHHHhhHHHHHHHHHHHHHhCCC--CcHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 012343          381 TSFLVGVSLAQIGEFAFVLLSRASNLHL--VEGKMYLLLLGTTALSLVTTPLLFKLIP  436 (465)
Q Consensus       381 ~a~~vgl~L~~~Ge~slvla~~a~~~gi--is~~~~~~ll~~v~lS~i~~Pll~r~~~  436 (465)
                      +...+|+.++.+++.++++++.|.+.+.  ..++.+..++..+++|.+++|++.|+..
T Consensus       327 ~~~~vg~L~gigftmsL~Ia~laf~~~~~~~~~~ak~~il~~s~~s~i~g~~~L~~~~  384 (388)
T 1zcd_A          327 QIMVVGILCGIGFTMSIFIASLAFGSVDPELINWAKLGILVGSISSAVIGYSWLRVRL  384 (388)
T ss_dssp             GGTTHHHHTTCCHHHHHHHHHHHSTTSSCSSHHHHHHHHHHHHHTTTSTTTGGGTTTC
T ss_pred             HHHHHHHHhccchHHHHHHHHHhccCCchhhHhhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            9999999999999999999999998876  3567799999999999999999877653
>3zux_A Transporter, ASBTNM; transport protein, membrane protein; HET: TCH LDA PTY; 2.20A {Neisseria meningitidis} PDB: 3zuy_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00