Citrus Sinensis ID: 012359

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-----
MASYISALCLSFIFFFTLLSIFPSSITSLTFSLSRFHTNPSQDSYQNLNSLVSSSLTRALHIKNPQTKTTTTTTTTTTTNISSHSYGGYSISLSFGTPPQIIPFILDTGSHLVWFPCTNHYQCKYCSSSKIPSFIPKLSSSSRLLGCQNPKCSWIHHESIQCRDCNDEPLATSKNCTQICPSYLVLYGSGLTEGIALSETLNLPNRIIPNFLVGCSVLSSRQPAGIAGFGRGKTSLPSQLNLDKFSYCLLSHKFDDTTRTSSLILDNGSSHSDKKTTGLTYTPFVNNPSVAERNAFSVYYYVGLRRITVGGQRVRVWHKYLTLDRDGNGGTIVDSGTTFTFMAPELFEPLADEFVSQMVKNRNYTRALGAEALTGLRPCFDVPGEKTGSFPELKLHFKGGAEVTLPVENYFAVVGEGSAVCLTVVTDREASGGPSIILGNFQMQNYYVEYDLRNQRLGFKQQLCK
cccHHHHHHHHHHHHHHHHHHcccccccccEEEEEEEccccccHHHHHHHHHHccHHHHHccccccccccccccccccccccccccccEEEEEEEcccccEEEEEEEccccEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEcccEEEEEEEEEEEEccccccccEEEEccccccccccEEEccccccccHHHHHcccccccccccccccccccccEEEEcccccccccccccEEEccccccccccccccccccEEEEEEEEEEccEEEcccccccEEcccccccEEEEcccccccccHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccEEEEEccccEEEEccccEEEEEccccEEEEEEEEccccccccEEEEEcEEEEEEEEEEEccccEEEEEEcccc
cHHHHHHHHHHHHHHHHHHHcccccccccEEEcccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccEEEEEEEEccccccEEEEEEccccEEEEEccccccccHccccccccccccccccccccccccHHHHccccccccccccccccccccccccccccEEEEEEccccccEEEEEEEEEEccEEEccEEEEccccccccccEEEEccccccccHHHHccccEEEEEEEEEcccccccccEEEEccccccccccccEEEEEEccccccccccccccEEEEEEEEEEEccEEEEccHHHEEEccccccEEEEEcccEEEcccHHHHHHHHHHHHHHHHHccccccccccccccccccEEEcccccccEccEEEEEEccccEccccHHHEEEEEccccEEEEEEEcccccccccEEEEEEEEEccEEEEEEccccEEEEcccccc
MASYISALCLSFIFFFTLlsifpssitslTFSLsrfhtnpsqdsyqNLNSLVSSSLTRAlhiknpqtktttttttttttnisshsyggysislsfgtppqiipfildtgshlvwfpctnhyqckycssskipsfipklssssrllgcqnpkcswihhesiqcrdcndeplatsknctqicPSYLVLYGsgltegialsetlnlpnriipnFLVGCsvlssrqpagiagfgrgktslpsqlnldkFSYCllshkfddttrtsslildngsshsdkkttgltytpfvnnpsvaernAFSVYYYVGLRRITVGGQRVRVWHKYLTldrdgnggtivdsgttftfmapelfepLADEFVSQMVKNRNYTRALGAealtglrpcfdvpgektgsfpelklhfkggaevtlpvENYFAVVGEGSAVCLTVVTdreasggpsiilgnfqmQNYYVEYdlrnqrlgfkQQLCK
MASYISALCLSFIFFFTLLSIFPSSITSLTFSLSRFHTNPSQDSYQNLNSLVSSSLTRalhiknpqtktttttttttttnisshSYGGYSISLSFGTPPQIIPFILDTGSHLVWFPCTNHYQCKYCSSSKIPSFIPKLSSSSRLLGCQNPKCSWIHHESIQCRDCNDEPLATSKNCTQICPSYLVLYGSGLTEGIALSETLNLPNRIIPNFLVGCSVLSSRQPAGIAGFGRGKTSLPSQLNLDKFSYCLLSHKFDDTtrtsslildngsshsdkkttgltytpfvnnpsvaerNAFSVYYYVGLrritvggqrvRVWHKyltldrdgnggtIVDSGTTFTFMAPELFEPLADEFVSQMVKNRNYTRALGAEALTGLRPCFDVPGEKTGSFPELKLHFKGGAEVTLPVENYFAVVGEGSAVCLTVVTDREASGGPSIILGNFQMQNYYVEYDLRNQRLGFKQQLCK
MASYISAlclsfiffftllsifpssiTSLTFSLSRFHTNPSQDSYQNLNSLVSSSLTRALHIKNPQtktttttttttttNisshsyggysislsFGTPPQIIPFILDTGSHLVWFPCTNHYQCKYCSSSKIPSFIPKLSSSSRLLGCQNPKCSWIHHESIQCRDCNDEPLATSKNCTQICPSYLVLYGSGLTEGIALSETLNLPNRIIPNFLVGCSVLSSRQPAGIAGFGRGKTSLPSQLNLDKFSYCLLSHKFDDTTRTSSLILDNGSSHSDKKTTGLTYTPFVNNPSVAERNAFSVYYYVGLRRITVGGQRVRVWHKYLTLDRDGNGGTIVDSGTTFTFMAPELFEPLADEFVSQMVKNRNYTRALGAEALTGLRPCFDVPGEKTGSFPELKLHFKGGAEVTLPVENYFAVVGEGSAVCLTVVTDREASGGPSIILGNFQMQNYYVEYDLRNQRLGFKQQLCK
***YISALCLSFIFFFTLLSIFPSSITSLTFSLSRF*************************************************YGGYSISLSFGTPPQIIPFILDTGSHLVWFPCTNHYQCKYCSSSKIPSFIPKLSSSSRLLGCQNPKCSWIHHESIQCRDCNDEPLATSKNCTQICPSYLVLYGSGLTEGIALSETLNLPNRIIPNFLVGCSVLSSRQPAGIAGFGRGKTSLPSQLNLDKFSYCLLSHKFDDTT*******************GLTYTPFVNNPSVAERNAFSVYYYVGLRRITVGGQRVRVWHKYLTLDRDGNGGTIVDSGTTFTFMAPELFEPLADEFVSQMVKNRNYTRALGAEALTGLRPCFDVPGEKTGSFPELKLHFKGGAEVTLPVENYFAVVGEGSAVCLTVVTDREASGGPSIILGNFQMQNYYVEYDLRNQRLGF******
******ALCLSFIFFFTLLSIFPS***********************************************************HSYGGYSISLSFGTPPQIIPFILDTGSHLVWFPCTNHYQCKYCSS**********SS**RLLGCQNPKCSWIHHESIQCRDCNDEPLATSKNCTQICPSYLVLYGSGLTEGIALSETLNLPNRIIPNFLVGCSVLSSRQPAGIAGFGRGKTSLPSQLNLDKFSYCLLSH************LDNGSSHSDKKTTGLTYTPFVNNPSVAERNAFSVYYYVGLRRITVGGQRVRVWHKYLTLDRDGNGGTIVDSGTTFTFMAPELFEPLADEFVSQMVK*********AEALTGLRPCFDVPGEKTGSFPELKLHFKGGAEVTLPVENYFAVVGEGSAVCLTVVTDREASGGPSIILGNFQMQNYYVEYDLRNQRLGFKQQLC*
MASYISALCLSFIFFFTLLSIFPSSITSLTFSLSRFHTNPSQDSYQNLNSLVSSSLTRALHIKNPQTKTTTTTTTTTTTNISSHSYGGYSISLSFGTPPQIIPFILDTGSHLVWFPCTNHYQCKYCSSSKIPSFIPKLSSSSRLLGCQNPKCSWIHHESIQCRDCNDEPLATSKNCTQICPSYLVLYGSGLTEGIALSETLNLPNRIIPNFLVGCSVLSSRQPAGIAGFGRGKTSLPSQLNLDKFSYCLLSHKFDDTTRTSSLILDNGSSHSDKKTTGLTYTPFVNNPSVAERNAFSVYYYVGLRRITVGGQRVRVWHKYLTLDRDGNGGTIVDSGTTFTFMAPELFEPLADEFVSQMVKNRNYTRALGAEALTGLRPCFDVPGEKTGSFPELKLHFKGGAEVTLPVENYFAVVGEGSAVCLTVVTDREASGGPSIILGNFQMQNYYVEYDLRNQRLGFKQQLCK
MASYISALCLSFIFFFTLLSIFPSSITSLTFSLSRFHTNPSQDSYQNLNSLVSSSLTRALHIK************TTTTNISSHSYGGYSISLSFGTPPQIIPFILDTGSHLVWFPCTNHYQCKYCSSSKIPSFIPKLSSSSRLLGCQNPKCSWIHHESIQCRDCNDEPLATSKNCTQICPSYLVLYGSGLTEGIALSETLNLPNRIIPNFLVGCSVLSSRQPAGIAGFGRGKTSLPSQLNLDKFSYCLLSHKFDDTTRTSSLILDNGSSHSDKKTTGLTYTPFVNNPSVAERNAFSVYYYVGLRRITVGGQRVRVWHKYLTLDRDGNGGTIVDSGTTFTFMAPELFEPLADEFVSQMVKNRNYTRALGAEALTGLRPCFDVPGEKTGSFPELKLHFKGGAEVTLPVENYFAVVGEGSAVCLTVVTDREASGGPSIILGNFQMQNYYVEYDLRNQRLGFKQQLC*
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MASYISALCLSFIFFFTLLSIFPSSITSLTFSLSRFHTNPSQDSYQNLNSLVSSSLTRALHIKNPQTKTTTTTTTTTTTNISSHSYGGYSISLSFGTPPQIIPFILDTGSHLVWFPCTNHYQCKYCSSSKIPSFIPKLSSSSRLLGCQNPKCSWIHHESIQCRDCNDEPLATSKNCTQICPSYLVLYGSGLTEGIALSETLNLPNRIIPNFLVGCSVLSSRQPAGIAGFGRGKTSLPSQLNLDKFSYCLLSHKFDDTTRTSSLILDNGSSHSDKKTTGLTYTPFVNNPSVAERNAFSVYYYVGLRRITVGGQRVRVWHKYLTLDRDGNGGTIVDSGTTFTFMAPELFEPLADEFVSQMVKNRNYTRALGAEALTGLRPCFDVPGEKTGSFPELKLHFKGGAEVTLPVENYFAVVGEGSAVCLTVVTDREASGGPSIILGNFQMQNYYVEYDLRNQRLGFKQQLCK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query465 2.2.26 [Sep-21-2011]
Q766C3437 Aspartic proteinase nepen N/A no 0.720 0.766 0.314 2e-35
Q766C2438 Aspartic proteinase nepen N/A no 0.722 0.767 0.309 5e-35
Q9LS40500 Protein ASPARTIC PROTEASE no no 0.767 0.714 0.283 3e-29
Q6XBF8437 Aspartic proteinase CDR1 no no 0.8 0.851 0.280 4e-23
Q3EBM5447 Probable aspartic proteas no no 0.709 0.738 0.276 3e-22
Q9LHE3470 Protein ASPARTIC PROTEASE no no 0.720 0.712 0.277 2e-21
Q9LZL3453 Aspartic proteinase PCS1 no no 0.739 0.759 0.251 1e-17
Q9S9K4475 Aspartic proteinase-like no no 0.716 0.701 0.235 4e-13
P18242410 Cathepsin D OS=Mus muscul yes no 0.724 0.821 0.234 5e-09
Q4LAL9410 Cathepsin D OS=Canis fami yes no 0.666 0.756 0.235 1e-08
>sp|Q766C3|NEP1_NEPGR Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis GN=nep1 PE=1 SV=1 Back     alignment and function desciption
 Score =  150 bits (378), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 121/385 (31%), Positives = 176/385 (45%), Gaps = 50/385 (12%)

Query: 87  GGYSISLSFGTPPQIIPFILDTGSHLVWFPCTNHYQCKYCSSSKIPSFIPKLSSSSRLLG 146
           G Y ++LS GTP Q    I+DTGS L+W  C     C  C +   P F P+ SSS   L 
Sbjct: 93  GEYLMNLSIGTPAQPFSAIMDTGSDLIWTQCQ---PCTQCFNQSTPIFNPQGSSSFSTLP 149

Query: 147 CQNPKCSWIHHESIQCRDCNDEPLATSKNCTQICPSYLVLYGSG-LTEGIALSETLNLPN 205
           C +  C  +                +S  C+     Y   YG G  T+G   +ETL   +
Sbjct: 150 CSSQLCQAL----------------SSPTCSNNFCQYTYGYGDGSETQGSMGTETLTFGS 193

Query: 206 RIIPNFLVGCSV----LSSRQPAGIAGFGRGKTSLPSQLNLDKFSYCLLSHKFDDTTRTS 261
             IPN   GC            AG+ G GRG  SLPSQL++ KFSYC+       ++  S
Sbjct: 194 VSIPNITFGCGENNQGFGQGNGAGLVGMGRGPLSLPSQLDVTKFSYCMTPIG---SSTPS 250

Query: 262 SLILDNGSSHSDKKTTGLTYTPFVNNPSVAERNAFSVYYYVGLRRITVGGQRVRVWHKYL 321
           +L+L    S ++  T G   +P   N ++ + +    +YY+ L  ++VG  R+ +     
Sbjct: 251 NLLL---GSLANSVTAG---SP---NTTLIQSSQIPTFYYITLNGLSVGSTRLPIDPSAF 301

Query: 322 TLD-RDGNGGTIVDSGTTFTFMAPELFEPLADEFVSQMVKNRNYTRALGAEALTGLRPCF 380
            L+  +G GG I+DSGTT T+     ++ +  EF+SQ+    N     G+ +  G   CF
Sbjct: 302 ALNSNNGTGGIIIDSGTTLTYFVNNAYQSVRQEFISQI----NLPVVNGSSS--GFDLCF 355

Query: 381 DVPGEKTG-SFPELKLHFKGGAEVTLPVENYFAVVGEGSAVCLTVVTDREASGGPSIILG 439
             P + +    P   +HF GG ++ LP ENYF     G  +CL + +  +       I G
Sbjct: 356 QTPSDPSNLQIPTFVMHFDGG-DLELPSENYFISPSNG-LICLAMGSSSQGMS----IFG 409

Query: 440 NFQMQNYYVEYDLRNQRLGFKQQLC 464
           N Q QN  V YD  N  + F    C
Sbjct: 410 NIQQQNMLVVYDTGNSVVSFASAQC 434
Extracellular proteinase found in the pitcher fluid of carnivorous plants. Digest prey for nitrogen uptake.
Nepenthes gracilis (taxid: 150966)
EC: 3EC: .EC: 4EC: .EC: 2EC: 3EC: .EC: 1EC: 2
>sp|Q766C2|NEP2_NEPGR Aspartic proteinase nepenthesin-2 OS=Nepenthes gracilis GN=nep2 PE=1 SV=1 Back     alignment and function description
>sp|Q9LS40|ASPG1_ARATH Protein ASPARTIC PROTEASE IN GUARD CELL 1 OS=Arabidopsis thaliana GN=ASPG1 PE=1 SV=1 Back     alignment and function description
>sp|Q6XBF8|CDR1_ARATH Aspartic proteinase CDR1 OS=Arabidopsis thaliana GN=CDR1 PE=1 SV=1 Back     alignment and function description
>sp|Q3EBM5|ASPR1_ARATH Probable aspartic protease At2g35615 OS=Arabidopsis thaliana GN=At2g35615 PE=3 SV=1 Back     alignment and function description
>sp|Q9LHE3|ASPG2_ARATH Protein ASPARTIC PROTEASE IN GUARD CELL 2 OS=Arabidopsis thaliana GN=ASPG2 PE=2 SV=1 Back     alignment and function description
>sp|Q9LZL3|PCS1L_ARATH Aspartic proteinase PCS1 OS=Arabidopsis thaliana GN=PCS1 PE=2 SV=1 Back     alignment and function description
>sp|Q9S9K4|ASPL2_ARATH Aspartic proteinase-like protein 2 OS=Arabidopsis thaliana GN=At1g65240 PE=1 SV=2 Back     alignment and function description
>sp|P18242|CATD_MOUSE Cathepsin D OS=Mus musculus GN=Ctsd PE=1 SV=1 Back     alignment and function description
>sp|Q4LAL9|CATD_CANFA Cathepsin D OS=Canis familiaris GN=CTSD PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query465
255565759447 Aspartic proteinase nepenthesin-2 precur 0.909 0.946 0.623 1e-157
224102847445 predicted protein [Populus trichocarpa] 0.924 0.966 0.625 1e-150
225464832467 PREDICTED: aspartic proteinase nepenthes 0.911 0.907 0.612 1e-145
255587337468 pepsin A, putative [Ricinus communis] gi 0.920 0.914 0.527 1e-129
449522369457 PREDICTED: LOW QUALITY PROTEIN: aspartic 0.946 0.962 0.528 1e-127
449437856457 PREDICTED: aspartic proteinase nepenthes 0.946 0.962 0.528 1e-127
356503843474 PREDICTED: aspartic proteinase nepenthes 0.956 0.938 0.504 1e-124
225440731469 PREDICTED: aspartic proteinase nepenthes 0.894 0.886 0.523 1e-123
224091907469 predicted protein [Populus trichocarpa] 0.875 0.867 0.534 1e-123
18409620469 aspartyl protease family protein [Arabid 0.926 0.918 0.5 1e-122
>gi|255565759|ref|XP_002523869.1| Aspartic proteinase nepenthesin-2 precursor, putative [Ricinus communis] gi|223536957|gb|EEF38595.1| Aspartic proteinase nepenthesin-2 precursor, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  561 bits (1445), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 277/444 (62%), Positives = 339/444 (76%), Gaps = 21/444 (4%)

Query: 24  SSITSLTFSLSRFHTNPSQDSYQNLNSLVSSSLTRALHIKNPQTKTTTTTTTTTTTNISS 83
           SS  S+  S S  + NPSQD  Q LN LVS+SL RA H+KNPQT           T + S
Sbjct: 23  SSFISIPLSHSYTNQNPSQDHLQKLNYLVSTSLARAHHLKNPQT-----------TPVFS 71

Query: 84  HSYGGYSISLSFGTPPQIIPFILDTGSHLVWFPCTNHYQCKYCS-SSKIPSFIPKLSSSS 142
           HSYGGYSISLSFGTPPQ + F++DTGS  VWFPCT  Y C  CS +S+I  F+PK SSSS
Sbjct: 72  HSYGGYSISLSFGTPPQTLSFVMDTGSSFVWFPCTLRYLCNNCSFTSRISPFLPKHSSSS 131

Query: 143 RLLGCQNPKCSWIHHESIQCRDCNDEPLATSKNCTQICPSYLVLYGSGLTEGIALSETLN 202
           +++GC+NPKCSWIH   ++C DC++     S+NC+QICP YL+LYGSG T G+ALSETL+
Sbjct: 132 KIIGCKNPKCSWIHQTDLRCTDCDNN----SRNCSQICPPYLILYGSGTTGGVALSETLH 187

Query: 203 LPNRIIPNFLVGCSVLSSRQPAGIAGFGRGKTSLPSQLNLDKFSYCLLSHKFDDTTRTSS 262
           L   I+PNFLVGCSV SSRQPAGIAGFGRG +SLPSQL L KFSYCLLSHKFDDT  +SS
Sbjct: 188 LHGLIVPNFLVGCSVFSSRQPAGIAGFGRGPSSLPSQLGLTKFSYCLLSHKFDDTQESSS 247

Query: 263 LILDNGSSHSDKKTTGLTYTPFVNNPSVAERNAFSVYYYVGLRRITVGGQRVRVWHKYLT 322
           L+LD+  S SDKKT  L YTP V NP V ++ AFSVYYYV LRRI++GG+ V++ +KYL+
Sbjct: 248 LVLDS-QSDSDKKTAALMYTPLVKNPKVQDKPAFSVYYYVSLRRISIGGRSVKIPYKYLS 306

Query: 323 LDRDGNGGTIVDSGTTFTFMAPELFEPLADEFVSQMVKNRNYTRALGAEALTGLRPCFDV 382
            D+DGNGGTI+DSGTTFT+M+ E FE L++EF+SQ+   +NY RAL  EAL+GL+PCF+V
Sbjct: 307 PDKDGNGGTIIDSGTTFTYMSTEAFEILSNEFISQV---KNYERALMVEALSGLKPCFNV 363

Query: 383 PGEKTGSFPELKLHFKGGAEVTLPVENYFAVVGEGSAVCLTVVTD-REASGGPSIILGNF 441
            G K    P+L+LHFKGGA+V LP+ENYFA +G     C TVVTD  E + GP +ILGNF
Sbjct: 364 SGAKELELPQLRLHFKGGADVELPLENYFAFLGSREVACFTVVTDGAEKASGPGMILGNF 423

Query: 442 QMQNYYVEYDLRNQRLGFKQQLCK 465
           QMQN+YVEYDL+N+RLGFK++ CK
Sbjct: 424 QMQNFYVEYDLQNERLGFKKESCK 447

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224102847|ref|XP_002312826.1| predicted protein [Populus trichocarpa] gi|222849234|gb|EEE86781.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225464832|ref|XP_002272243.1| PREDICTED: aspartic proteinase nepenthesin-2-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|255587337|ref|XP_002534234.1| pepsin A, putative [Ricinus communis] gi|223525662|gb|EEF28148.1| pepsin A, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449522369|ref|XP_004168199.1| PREDICTED: LOW QUALITY PROTEIN: aspartic proteinase nepenthesin-2-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449437856|ref|XP_004136706.1| PREDICTED: aspartic proteinase nepenthesin-2-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356503843|ref|XP_003520712.1| PREDICTED: aspartic proteinase nepenthesin-2-like [Glycine max] Back     alignment and taxonomy information
>gi|225440731|ref|XP_002280866.1| PREDICTED: aspartic proteinase nepenthesin-2-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|224091907|ref|XP_002309394.1| predicted protein [Populus trichocarpa] gi|222855370|gb|EEE92917.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|18409620|ref|NP_566966.1| aspartyl protease family protein [Arabidopsis thaliana] gi|13430562|gb|AAK25903.1|AF360193_1 unknown protein [Arabidopsis thaliana] gi|4886277|emb|CAB43423.1| putative protein [Arabidopsis thaliana] gi|14532764|gb|AAK64083.1| unknown protein [Arabidopsis thaliana] gi|15450892|gb|AAK96717.1| Unknown protein [Arabidopsis thaliana] gi|30387567|gb|AAP31949.1| At3g52500 [Arabidopsis thaliana] gi|332645431|gb|AEE78952.1| aspartyl protease family protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query465
TAIR|locus:2079919469 AT3G52500 [Arabidopsis thalian 0.924 0.916 0.479 5.7e-107
TAIR|locus:505006483499 AT4G16563 [Arabidopsis thalian 0.455 0.424 0.337 2.9e-52
TAIR|locus:2153197491 AT5G45120 [Arabidopsis thalian 0.769 0.729 0.362 7.4e-50
TAIR|locus:2045615527 AT2G42980 [Arabidopsis thalian 0.726 0.641 0.318 3.7e-39
TAIR|locus:2056916461 AT2G03200 [Arabidopsis thalian 0.724 0.731 0.336 1.3e-38
TAIR|locus:2077700535 AT3G59080 "AT3G59080" [Arabido 0.729 0.633 0.313 1.2e-35
TAIR|locus:2076745483 AT3G61820 [Arabidopsis thalian 0.713 0.687 0.324 1.2e-35
TAIR|locus:2102335452 AT3G25700 [Arabidopsis thalian 0.724 0.745 0.329 2.2e-34
TAIR|locus:2013865430 AT1G66180 [Arabidopsis thalian 0.729 0.788 0.317 4.7e-32
TAIR|locus:2031225483 AT1G25510 [Arabidopsis thalian 0.602 0.579 0.305 5.4e-31
TAIR|locus:2079919 AT3G52500 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1058 (377.5 bits), Expect = 5.7e-107, P = 5.7e-107
 Identities = 220/459 (47%), Positives = 291/459 (63%)

Query:    27 TSLTFSLSRF-HTNPS-QDSYQNLNSLVSSSLTRALHIKN-----PQXXXXXXXXXXXXX 79
             +++   LS F H++ S +D Y +L  L  SS+ RA  +K+     P              
Sbjct:    17 SAVKLPLSPFSHSDQSPKDPYLSLRRLAESSIARAHKLKHGTSIKPDEDALSSTTTASAT 76

Query:    80 ----NXXXXXXXXXXXXXXFGTPPQIIPFILDTGSHLVWFPCTNHYQCKYCSSSK----- 130
                                FGTP Q IPF+ DTGS LVW PCT+ Y C  C  S      
Sbjct:    77 VVKSPLSAKSYGGYSVSLSFGTPSQTIPFVFDTGSSLVWLPCTSRYLCSGCDFSGLDPTL 136

Query:   131 IPSFIPKLSSSSRLLGCQNPKCSWIHHESIQCRDCNDEPLATSKNCTQICPSYLVLYGSG 190
             IP FIPK SSSS+++GCQ+PKC +++  ++QCR C  +P   ++NCT  CP Y++ YG G
Sbjct:   137 IPRFIPKNSSSSKIIGCQSPKCQFLYGPNVQCRGC--DP--NTRNCTVGCPPYILQYGLG 192

Query:   191 LTEGIALSETLNLPNRIIPNFLVGCSVLSSRQPAGIAGFGRGKTSLPSQLNLDKFSYCLL 250
              T G+ ++E L+ P+  +P+F+VGCS++S+RQPAGIAGFGRG  SLPSQ+NL +FS+CL+
Sbjct:   193 STAGVLITEKLDFPDLTVPDFVVGCSIISTRQPAGIAGFGRGPVSLPSQMNLKRFSHCLV 252

Query:   251 SHKFDDTTRTSSLILDNGSSH-SDKKTTGLTYTPFVNNPSVAERNAFSVYYYVGLRRITV 309
             S +FDDT  T+ L LD GS H S  KT GLTYTPF  NP+V+ + AF  YYY+ LRRI V
Sbjct:   253 SRRFDDTNVTTDLDLDTGSGHNSGSKTPGLTYTPFRKNPNVSNK-AFLEYYYLNLRRIYV 311

Query:   310 GGQRVRVWHKYLTLDRDGNGGTIVDSGTTFTFMAPELFEPLADEFVSQMVKNRNYTRALG 369
             G + V++ +KYL    +G+GG+IVDSG+TFTFM   +FE +A+EF SQM    NYTR   
Sbjct:   312 GRKHVKIPYKYLAPGTNGDGGSIVDSGSTFTFMERPVFELVAEEFASQM---SNYTREKD 368

Query:   370 AEALTGLRPCFDVPGEKTGSFPELKLHFKGGAEVTLPVENYFAVVGEGSAVCLTVVTDRE 429
              E  TGL PCF++ G+   + PEL   FKGGA++ LP+ NYF  VG    VCLTVV+D+ 
Sbjct:   369 LEKETGLGPCFNISGKGDVTVPELIFEFKGGAKLELPLSNYFTFVGNTDTVCLTVVSDKT 428

Query:   430 A--SGG--PSIILGNFQMQNYYVEYDLRNQRLGFKQQLC 464
                SGG  P+IILG+FQ QNY VEYDL N R GF ++ C
Sbjct:   429 VNPSGGTGPAIILGSFQQQNYLVEYDLENDRFGFAKKKC 467
GO:0004190 "aspartic-type endopeptidase activity" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0006508 "proteolysis" evidence=IEA;ISS
GO:0005618 "cell wall" evidence=IDA
GO:0009505 "plant-type cell wall" evidence=IDA
GO:0016020 "membrane" evidence=IDA
GO:0005829 "cytosol" evidence=RCA
GO:0000271 "polysaccharide biosynthetic process" evidence=RCA
GO:0006546 "glycine catabolic process" evidence=RCA
TAIR|locus:505006483 AT4G16563 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2153197 AT5G45120 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2045615 AT2G42980 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2056916 AT2G03200 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2077700 AT3G59080 "AT3G59080" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2076745 AT3G61820 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2102335 AT3G25700 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2013865 AT1G66180 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031225 AT1G25510 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.230.691
3rd Layer3.4.23.12LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
gw1.IX.330.1
hypothetical protein (445 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query465
cd05476265 cd05476, pepsin_A_like_plant, Chroloplast Nucleoid 5e-75
cd05472299 cd05472, cnd41_like, Chloroplast Nucleoids DNA-bin 5e-51
cd05471283 cd05471, pepsin_like, Pepsin-like aspartic proteas 5e-44
PLN03146431 PLN03146, PLN03146, aspartyl protease family prote 3e-38
cd05489362 cd05489, xylanase_inhibitor_I_like, TAXI-I inhibit 1e-26
cd06096326 cd06096, Plasmepsin_5, Plasmepsins are a class of 2e-16
pfam00026316 pfam00026, Asp, Eukaryotic aspartyl protease 4e-15
cd05475273 cd05475, nucellin_like, Nucellins, plant aspartic 6e-11
cd05488320 cd05488, Proteinase_A_fungi, Fungal Proteinase A , 5e-09
cd05490325 cd05490, Cathepsin_D2, Cathepsin_D2, pepsin family 9e-09
cd05476265 cd05476, pepsin_A_like_plant, Chroloplast Nucleoid 4e-08
cd05470109 cd05470, pepsin_retropepsin_like, Cellular and ret 7e-06
cd05474295 cd05474, SAP_like, SAPs, pepsin-like proteinases s 4e-05
>gnl|CDD|133143 cd05476, pepsin_A_like_plant, Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information 
 Score =  236 bits (603), Expect = 5e-75
 Identities = 113/294 (38%), Positives = 140/294 (47%), Gaps = 67/294 (22%)

Query: 180 CPSYLVLYGSG-LTEGIALSETLNLP--NRIIPNFLVGCSVL----SSRQPAGIAGFGRG 232
           C SY   YG G  T G+  +ET      +  +PN   GC       S     GI G GRG
Sbjct: 30  CCSYEYSYGDGSSTSGVLATETFTFGDSSVSVPNVAFGCGTDNEGGSFGGADGILGLGRG 89

Query: 233 KTSLPSQLNL--DKFSYCLLSHKFDDTTRTSSLILDNGSSHSDKKTTGLTYTPFVNNPSV 290
             SL SQL    +KFSYCL+ H  DDT  +S LIL      +D   +G+ YTP V NP  
Sbjct: 90  PLSLVSQLGSTGNKFSYCLVPH--DDTGGSSPLILG---DAADLGGSGVVYTPLVKNP-- 142

Query: 291 AERNAFSVYYYVGLRRITVGGQRVRVWHKYLTLDRDGNGGTIVDSGTTFTFMAPELFEPL 350
               A   YYYV L  I+VGG+R+ +      +D DG+GGTI+DSGTT T++        
Sbjct: 143 ----ANPTYYYVNLEGISVGGKRLPIPPSVFAIDSDGSGGTIIDSGTTLTYLPDPA---- 194

Query: 351 ADEFVSQMVKNRNYTRALGAEALTGLRPCFDVPGEKTGSFPELKLHFKGGAEVTLPVENY 410
                                                  +P+L LHF GGA++ LP ENY
Sbjct: 195 ---------------------------------------YPDLTLHFDGGADLELPPENY 215

Query: 411 FAVVGEGSAVCLTVVTDREASGGPSIILGNFQMQNYYVEYDLRNQRLGFKQQLC 464
           F  VGEG  VCL +++    S G   ILGN Q QN+ VEYDL N RLGF    C
Sbjct: 216 FVDVGEG-VVCLAILSS---SSGGVSILGNIQQQNFLVEYDLENSRLGFAPADC 265

This family contains pepsin like aspartic proteases from plants including Chloroplast Nucleoids DNA-binding Protease and Nucellin. Chloroplast Nucleoids DNA-binding Protease catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) in senescent leaves of tobacco and Nucellins are important regulators of nucellar cell's progressive degradation after ovule fertilization. Structurally, aspartic proteases are bilobal enzymes, each lobe contributing a catalytic Asp residue, with an extended active site cleft localized between the two lobes of the molecule. The N- and C-terminal domains, although structurally related by a 2-fold axis, have only limited sequence homology except the vicinity of the active site. This suggests that the enzymes evolved by an ancient duplication event. The enzymes specifically cleave bonds in peptides which have at least six residues in length with hydrophobic residues in both the P1 and P1' positions. The active site is located at the groove formed by the two lobes, with an extended loop projecting over the cleft to form an 11-residue flap, which encloses substrates and inhibitors in the active site. Specificity is determined by nearest-neighbor hydrophobic residues surrounding the catalytic aspartates, and by three residues in the flap. The enzymes are mostly secreted from cells as inactive proenzymes that activate autocatalytically at acidic pH. Length = 265
>gnl|CDD|133139 cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information
>gnl|CDD|133138 cd05471, pepsin_like, Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>gnl|CDD|178691 PLN03146, PLN03146, aspartyl protease family protein; Provisional Back     alignment and domain information
>gnl|CDD|133156 cd05489, xylanase_inhibitor_I_like, TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information
>gnl|CDD|133160 cd06096, Plasmepsin_5, Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite Back     alignment and domain information
>gnl|CDD|215663 pfam00026, Asp, Eukaryotic aspartyl protease Back     alignment and domain information
>gnl|CDD|133142 cd05475, nucellin_like, Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information
>gnl|CDD|133155 cd05488, Proteinase_A_fungi, Fungal Proteinase A , aspartic proteinase superfamily Back     alignment and domain information
>gnl|CDD|133157 cd05490, Cathepsin_D2, Cathepsin_D2, pepsin family of proteinases Back     alignment and domain information
>gnl|CDD|133143 cd05476, pepsin_A_like_plant, Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information
>gnl|CDD|133137 cd05470, pepsin_retropepsin_like, Cellular and retroviral pepsin-like aspartate proteases Back     alignment and domain information
>gnl|CDD|133141 cd05474, SAP_like, SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 465
PLN03146431 aspartyl protease family protein; Provisional 100.0
PTZ00165482 aspartyl protease; Provisional 100.0
cd05478317 pepsin_A Pepsin A, aspartic protease produced in g 100.0
cd05490325 Cathepsin_D2 Cathepsin_D2, pepsin family of protei 100.0
KOG1339398 consensus Aspartyl protease [Posttranslational mod 100.0
cd05486316 Cathespin_E Cathepsin E, non-lysosomal aspartic pr 100.0
cd05487326 renin_like Renin stimulates production of angioten 100.0
PTZ00147453 plasmepsin-1; Provisional 100.0
cd06098317 phytepsin Phytepsin, a plant homolog of mammalian 100.0
cd05488320 Proteinase_A_fungi Fungal Proteinase A , aspartic 100.0
PTZ00013450 plasmepsin 4 (PM4); Provisional 100.0
cd05477318 gastricsin Gastricsins, asparate proteases produce 100.0
cd05485329 Cathepsin_D_like Cathepsin_D_like, pepsin family o 100.0
cd05472299 cnd41_like Chloroplast Nucleoids DNA-binding Prote 100.0
cd06096326 Plasmepsin_5 Plasmepsins are a class of aspartic p 100.0
cd05473364 beta_secretase_like Beta-secretase, aspartic-acid 100.0
cd05489362 xylanase_inhibitor_I_like TAXI-I inhibits degradat 100.0
cd06097278 Aspergillopepsin_like Aspergillopepsin_like, aspar 100.0
cd05476265 pepsin_A_like_plant Chroloplast Nucleoids DNA-bind 100.0
cd05475273 nucellin_like Nucellins, plant aspartic proteases 100.0
PF00026317 Asp: Eukaryotic aspartyl protease The Prosite entr 100.0
cd05474295 SAP_like SAPs, pepsin-like proteinases secreted fr 100.0
cd05471283 pepsin_like Pepsin-like aspartic proteases, biloba 100.0
PF14543164 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 99.95
PF14541161 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 99.92
cd05470109 pepsin_retropepsin_like Cellular and retroviral pe 99.89
cd0548396 retropepsin_like_bacteria Bacterial aspartate prot 98.13
TIGR02281121 clan_AA_DTGA clan AA aspartic protease, TIGR02281 96.64
PF1365090 Asp_protease_2: Aspartyl protease 95.8
cd05479124 RP_DDI RP_DDI; retropepsin-like domain of DNA dama 95.1
cd05479124 RP_DDI RP_DDI; retropepsin-like domain of DNA dama 95.09
PF08284135 RVP_2: Retroviral aspartyl protease; InterPro: IPR 94.49
PF11925370 DUF3443: Protein of unknown function (DUF3443); In 94.14
cd0548491 retropepsin_like_LTR_2 Retropepsins_like_LTR, peps 93.24
TIGR03698107 clan_AA_DTGF clan AA aspartic protease, AF_0612 fa 90.53
TIGR02281121 clan_AA_DTGA clan AA aspartic protease, TIGR02281 87.69
PF1397572 gag-asp_proteas: gag-polyprotein putative aspartyl 85.42
PF1365090 Asp_protease_2: Aspartyl protease 84.68
COG3577215 Predicted aspartyl protease [General function pred 83.35
cd0548491 retropepsin_like_LTR_2 Retropepsins_like_LTR, peps 81.2
>PLN03146 aspartyl protease family protein; Provisional Back     alignment and domain information 
Probab=100.00  E-value=2.4e-63  Score=501.78  Aligned_cols=391  Identities=29%  Similarity=0.527  Sum_probs=308.8

Q ss_pred             cCcceEEEEEeecCC--C----CCCChHHHHHHHHhhchhhHhhhcCCCCCCccccccceeeecccCCcccEEEEEeeCC
Q 012359           24 SSITSLTFSLSRFHT--N----PSQDSYQNLNSLVSSSLTRALHIKNPQTKTTTTTTTTTTTNISSHSYGGYSISLSFGT   97 (465)
Q Consensus        24 ~~~~~~~~pl~~~~~--~----~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~~~i~iGt   97 (465)
                      +....+++||.|++.  .    +.....++++++++++.+|.+++..+...     ...+..++.. .++.|+++|.|||
T Consensus        20 ~~~~~~~~~l~h~~~~~sp~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~-----~~~~~~~~~~-~~~~Y~v~i~iGT   93 (431)
T PLN03146         20 APKGGFTVDLIHRDSPKSPFYNPSETPSQRLRNAFRRSISRVNHFRPTDAS-----PNDPQSDLIS-NGGEYLMNISIGT   93 (431)
T ss_pred             ccCCceEEEEEeCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHhhcccc-----CCccccCccc-CCccEEEEEEcCC
Confidence            345689999999842  2    24455688999999999999888644321     1233334433 4579999999999


Q ss_pred             CCcEEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCccCCCCccCCCCCCCCCCCCccCCCCCc
Q 012359           98 PPQIIPFILDTGSHLVWFPCTNHYQCKYCSSSKIPSFIPKLSSSSRLLGCQNPKCSWIHHESIQCRDCNDEPLATSKNCT  177 (465)
Q Consensus        98 P~q~~~v~iDTGS~~~Wv~~~~~~~C~~C~~~~~~~y~p~~SsT~~~~~c~~~~c~~~~~~~~~c~~c~~~~~~~~~~c~  177 (465)
                      |||++.|+|||||+++||+|.   +|..|..+.++.|||++|+||+.+.|.++.|+..... ..|   ..     +    
T Consensus        94 Ppq~~~vi~DTGS~l~Wv~C~---~C~~C~~~~~~~fdps~SST~~~~~C~s~~C~~~~~~-~~c---~~-----~----  157 (431)
T PLN03146         94 PPVPILAIADTGSDLIWTQCK---PCDDCYKQVSPLFDPKKSSTYKDVSCDSSQCQALGNQ-ASC---SD-----E----  157 (431)
T ss_pred             CCceEEEEECCCCCcceEcCC---CCcccccCCCCcccCCCCCCCcccCCCCcccccCCCC-CCC---CC-----C----
Confidence            999999999999999999999   9999998889999999999999999999999865432 122   21     1    


Q ss_pred             cCCCceeEecCCce-EEEeEEEEEEEcCC-----cccccEEEeceecCCC----CCCcccccCCCCCCcccccCC---Ce
Q 012359          178 QICPSYLVLYGSGL-TEGIALSETLNLPN-----RIIPNFLVGCSVLSSR----QPAGIAGFGRGKTSLPSQLNL---DK  244 (465)
Q Consensus       178 ~~C~~~~~~Yg~g~-~~G~~~~D~v~~~~-----~~i~~~~fg~~~~~~~----~~~GilGLg~~~~sl~~ql~~---~~  244 (465)
                      +.| .|.+.||+|+ +.|.+++|+|+|++     ..++++.|||++....    ..+||||||++..|+++|+..   ++
T Consensus       158 ~~c-~y~i~Ygdgs~~~G~l~~Dtltlg~~~~~~~~v~~~~FGc~~~~~g~f~~~~~GilGLG~~~~Sl~sql~~~~~~~  236 (431)
T PLN03146        158 NTC-TYSYSYGDGSFTKGNLAVETLTIGSTSGRPVSFPGIVFGCGHNNGGTFDEKGSGIVGLGGGPLSLISQLGSSIGGK  236 (431)
T ss_pred             CCC-eeEEEeCCCCceeeEEEEEEEEeccCCCCcceeCCEEEeCCCCCCCCccCCCceeEecCCCCccHHHHhhHhhCCc
Confidence            246 9999999998 78999999999987     3589999999986532    359999999999999999764   68


Q ss_pred             eeeecCCCCCCCCCCccceEEecCCCCCCcCCCCeeeeccccCCcccccCCcceeEEEEeeEEEECCEEEEeeccceecc
Q 012359          245 FSYCLLSHKFDDTTRTSSLILDNGSSHSDKKTTGLTYTPFVNNPSVAERNAFSVYYYVGLRRITVGGQRVRVWHKYLTLD  324 (465)
Q Consensus       245 Fs~~l~~~~~~~~~~~~g~l~~Gg~d~~~~~~g~l~~~p~~~~~~~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~  324 (465)
                      ||+||.+..  ......|.|+||+.  .++..+.+.|+|++....       ..+|.|+|++|+||++.+.++...+.  
T Consensus       237 FSycL~~~~--~~~~~~g~l~fG~~--~~~~~~~~~~tPl~~~~~-------~~~y~V~L~gIsVgg~~l~~~~~~~~--  303 (431)
T PLN03146        237 FSYCLVPLS--SDSNGTSKINFGTN--AIVSGSGVVSTPLVSKDP-------DTFYYLTLEAISVGSKKLPYTGSSKN--  303 (431)
T ss_pred             EEEECCCCC--CCCCCcceEEeCCc--cccCCCCceEcccccCCC-------CCeEEEeEEEEEECCEECcCCccccc--
Confidence            999997631  22234799999984  331234589999986421       46899999999999999887666553  


Q ss_pred             cCCCCceEEccccceeecChhhhHHHHHHHHHHhhcccccccccccccCCCCCCccccCCCCCccCCeEEEEEcCCcEEE
Q 012359          325 RDGNGGTIVDSGTTFTFMAPELFEPLADEFVSQMVKNRNYTRALGAEALTGLRPCFDVPGEKTGSFPELKLHFKGGAEVT  404 (465)
Q Consensus       325 ~~~~~~~iiDSGt~~~~lp~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~p~i~f~f~gg~~~~  404 (465)
                      ..+...+||||||++++||+++|++|.++|.+.+..   ..   .......+.+|+.....  ..+|.|+|+| +|+++.
T Consensus       304 ~~~~g~~iiDSGTt~t~Lp~~~y~~l~~~~~~~~~~---~~---~~~~~~~~~~C~~~~~~--~~~P~i~~~F-~Ga~~~  374 (431)
T PLN03146        304 GVEEGNIIIDSGTTLTLLPSDFYSELESAVEEAIGG---ER---VSDPQGLLSLCYSSTSD--IKLPIITAHF-TGADVK  374 (431)
T ss_pred             cCCCCcEEEeCCccceecCHHHHHHHHHHHHHHhcc---cc---CCCCCCCCCccccCCCC--CCCCeEEEEE-CCCeee
Confidence            234467999999999999999999999999988762   11   11222346789975322  4789999999 689999


Q ss_pred             ecCCCeEEEecCCCeEEEEEEecCCCCCCCceeecccceeeeEEEEeCCCCEEEEecCCCC
Q 012359          405 LPVENYFAVVGEGSAVCLTVVTDREASGGPSIILGNFQMQNYYVEYDLRNQRLGFKQQLCK  465 (465)
Q Consensus       405 l~~~~yi~~~~~~~~~C~~~i~~~~~~~~~~~ILG~~fl~~~y~vfD~~~~~iGfA~~~C~  465 (465)
                      |++++|+++... +..|+.++..     .+.||||+.|||++|+|||++++|||||+++|+
T Consensus       375 l~~~~~~~~~~~-~~~Cl~~~~~-----~~~~IlG~~~q~~~~vvyDl~~~~igFa~~~C~  429 (431)
T PLN03146        375 LQPLNTFVKVSE-DLVCFAMIPT-----SSIAIFGNLAQMNFLVGYDLESKTVSFKPTDCT  429 (431)
T ss_pred             cCcceeEEEcCC-CcEEEEEecC-----CCceEECeeeEeeEEEEEECCCCEEeeecCCcC
Confidence            999999998765 6789987643     235999999999999999999999999999995

>PTZ00165 aspartyl protease; Provisional Back     alignment and domain information
>cd05478 pepsin_A Pepsin A, aspartic protease produced in gastric mucosa of mammals Back     alignment and domain information
>cd05490 Cathepsin_D2 Cathepsin_D2, pepsin family of proteinases Back     alignment and domain information
>KOG1339 consensus Aspartyl protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd05486 Cathespin_E Cathepsin E, non-lysosomal aspartic protease Back     alignment and domain information
>cd05487 renin_like Renin stimulates production of angiotensin and thus affects blood pressure Back     alignment and domain information
>PTZ00147 plasmepsin-1; Provisional Back     alignment and domain information
>cd06098 phytepsin Phytepsin, a plant homolog of mammalian lysosomal pepsins Back     alignment and domain information
>cd05488 Proteinase_A_fungi Fungal Proteinase A , aspartic proteinase superfamily Back     alignment and domain information
>PTZ00013 plasmepsin 4 (PM4); Provisional Back     alignment and domain information
>cd05477 gastricsin Gastricsins, asparate proteases produced in gastric mucosa Back     alignment and domain information
>cd05485 Cathepsin_D_like Cathepsin_D_like, pepsin family of proteinases Back     alignment and domain information
>cd05472 cnd41_like Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information
>cd06096 Plasmepsin_5 Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite Back     alignment and domain information
>cd05473 beta_secretase_like Beta-secretase, aspartic-acid protease important in the pathogenesis of Alzheimer's disease Back     alignment and domain information
>cd05489 xylanase_inhibitor_I_like TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information
>cd06097 Aspergillopepsin_like Aspergillopepsin_like, aspartic proteases of fungal origin Back     alignment and domain information
>cd05476 pepsin_A_like_plant Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information
>cd05475 nucellin_like Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information
>PF00026 Asp: Eukaryotic aspartyl protease The Prosite entry also includes Pfam:PF00077 Back     alignment and domain information
>cd05474 SAP_like SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins Back     alignment and domain information
>cd05471 pepsin_like Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>PF14543 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 3VLB_A 3VLA_A 3AUP_D 1T6G_A 1T6E_X 2B42_A Back     alignment and domain information
>PF14541 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 3HD8_A 1T6G_A 1T6E_X 2B42_A 3VLB_A 3VLA_A Back     alignment and domain information
>cd05470 pepsin_retropepsin_like Cellular and retroviral pepsin-like aspartate proteases Back     alignment and domain information
>cd05483 retropepsin_like_bacteria Bacterial aspartate proteases, retropepsin-like protease family Back     alignment and domain information
>TIGR02281 clan_AA_DTGA clan AA aspartic protease, TIGR02281 family Back     alignment and domain information
>PF13650 Asp_protease_2: Aspartyl protease Back     alignment and domain information
>cd05479 RP_DDI RP_DDI; retropepsin-like domain of DNA damage inducible protein Back     alignment and domain information
>cd05479 RP_DDI RP_DDI; retropepsin-like domain of DNA damage inducible protein Back     alignment and domain information
>PF08284 RVP_2: Retroviral aspartyl protease; InterPro: IPR013242 This region defines single domain aspartyl proteases from retroviruses, retrotransposons, and badnaviruses (plant dsDNA viruses) Back     alignment and domain information
>PF11925 DUF3443: Protein of unknown function (DUF3443); InterPro: IPR021847 This family of proteins are functionally uncharacterised Back     alignment and domain information
>cd05484 retropepsin_like_LTR_2 Retropepsins_like_LTR, pepsin-like aspartate proteases Back     alignment and domain information
>TIGR03698 clan_AA_DTGF clan AA aspartic protease, AF_0612 family Back     alignment and domain information
>TIGR02281 clan_AA_DTGA clan AA aspartic protease, TIGR02281 family Back     alignment and domain information
>PF13975 gag-asp_proteas: gag-polyprotein putative aspartyl protease Back     alignment and domain information
>PF13650 Asp_protease_2: Aspartyl protease Back     alignment and domain information
>COG3577 Predicted aspartyl protease [General function prediction only] Back     alignment and domain information
>cd05484 retropepsin_like_LTR_2 Retropepsins_like_LTR, pepsin-like aspartate proteases Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query465
3vlb_A413 Crystal Structure Of Xeg-Edgp Length = 413 2e-19
3vla_A413 Crystal Structure Of Edgp Length = 413 2e-19
1t6e_X381 Crystal Structure Of The Triticum Aestivum Xylanase 5e-18
2b42_A381 Crystal Structure Of The Triticum Xylanse Inhibitor 5e-16
3hd8_A389 Crystal Structure Of The Triticum Aestivum Xylanase 3e-14
1lya_B241 Crystal Structures Of Native And Inhibited Forms Of 2e-04
3aup_A403 Crystal Structure Of Basic 7s Globulin From Soybean 4e-04
>pdb|3VLB|A Chain A, Crystal Structure Of Xeg-Edgp Length = 413 Back     alignment and structure 
Iteration: 1

 Score = 94.0 bits (232), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 97/392 (24%), Positives = 171/392 (43%), Gaps = 61/392 (15%)
Query: 104 FILDTGSHLVWFPCTNHYQCKYCSSSKIPSFIPKLSSSSRLLGCQNPKCSWIHHESIQCR 163
            ++D G   +W  C  +Y                +SS+ R + C+  +CS     SI C 
Sbjct: 37  LVVDLGGRFLWVDCDQNY----------------VSSTYRPVRCRTSQCSL--SGSIACG 78
Query: 164 DCNDEPLATSKNCT-QICPSYLVL---YGSGLTEGIALSETLN--LPNRII--PNFLVGC 215
           DC + P     N T  + P   V+    G  + E +   E+ +     R++  P F+  C
Sbjct: 79  DCFNGPRPGCNNNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSC 138
Query: 216 SVLSSRQ-----PAGIAGFGRGKTSLPSQLN-----LDKFSYCLLSHKFDDTTRTSSLIL 265
           +  S  Q       G+AG GR + +LPSQ         KF+ CL       +T ++S+I+
Sbjct: 139 APTSLLQNLASGVVGMAGLGRTRIALPSQFASAFSFKRKFAMCL-----SGSTSSNSVII 193
Query: 266 DNGSSH--------SDKKTTGLTYTPFVNNP----SVAERNAFSVYYYVGLRRITVGGQR 313
                +        SDK    LTYTP + NP    + + +   SV Y++G++ I +  + 
Sbjct: 194 FGNDPYTFLPNIIVSDKT---LTYTPLLTNPVSTSATSTQGEPSVEYFIGVKSIKINSKI 250
Query: 314 VRVWHKYLTLDRDGNGGTIVDSGTTFTFMAPELFEPLADEFVSQMVKNRNYTRALGAEAL 373
           V +    L++   G GGT + +   +T +   +++ + + F+ +    RN TR       
Sbjct: 251 VALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAA-RNITRVASVAPF 309
Query: 374 TGLRPCFDVPGEKTG-SFPELKLHFKGGAEV-TLPVENYFAVVGEGSAVCLTVVTDREAS 431
                  ++   + G S P + L  +  + V T+   N    + + + VCL VV D  ++
Sbjct: 310 GACFSTDNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYIND-NVVCLGVV-DGGSN 367
Query: 432 GGPSIILGNFQMQNYYVEYDLRNQRLGFKQQL 463
              SI++G  Q+++  V++DL   R+GF   L
Sbjct: 368 LRTSIVIGGHQLEDNLVQFDLATSRVGFSGTL 399
>pdb|3VLA|A Chain A, Crystal Structure Of Edgp Length = 413 Back     alignment and structure
>pdb|1T6E|X Chain X, Crystal Structure Of The Triticum Aestivum Xylanase Inhibitor I Length = 381 Back     alignment and structure
>pdb|2B42|A Chain A, Crystal Structure Of The Triticum Xylanse Inhibitor-I In Complex With Bacillus Subtilis Xylanase Length = 381 Back     alignment and structure
>pdb|3HD8|A Chain A, Crystal Structure Of The Triticum Aestivum Xylanase Inhibitor-Iia In Complex With Bacillus Subtilis Xylanase Length = 389 Back     alignment and structure
>pdb|1LYA|B Chain B, Crystal Structures Of Native And Inhibited Forms Of Human Cathepsin D: Implications For Lysosomal Targeting And Drug Design Length = 241 Back     alignment and structure
>pdb|3AUP|A Chain A, Crystal Structure Of Basic 7s Globulin From Soybean Length = 403 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query465
3aup_A403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 2e-74
3vla_A413 EDGP; extracellular, inhibitor, plant protein; HET 1e-71
1t6e_X381 Xylanase inhibitor; two beta-barrel domain structu 2e-71
3lpj_A455 Beta-secretase 1; alzheimer'S, aspartyl protease, 1e-20
1j71_A334 Candidapepsin, aspartic proteinase; candida tropic 1e-19
3pvk_A342 Candidapepsin-2; hydrolase; 1.27A {Candida albican 1e-19
2qzx_A342 Candidapepsin-5; aspartic proteinase, aspartyl pro 2e-19
1tzs_A351 Cathepsin E; hydrolase, aspartic protease, activat 4e-19
2ewy_A383 Beta-secretase 2; BACE2, aspartic protease, hydrol 5e-19
3fv3_A339 SAPP1P-secreted aspartic protease 1; secreted aspa 5e-19
2qp8_A395 Beta-secretase 1; BACE1, protease, alternative spl 2e-18
2x0b_A383 Renin; hydrolase-hormone complex, hydrolase hormon 4e-18
1am5_A324 Pepsin, acid proteinase; aspartyl protease, hydrol 4e-18
3cms_A323 Chymosin B; hydrolase, acid proteinase; 2.00A {Bos 5e-18
3psg_A370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 6e-18
1dpj_A329 Proteinase A; proteinase A, hydrolase-hydrolase in 1e-17
3k1w_A341 Renin; protease, alternative splicing, aspartyl pr 2e-17
3c9x_A329 Trichoderma reesei aspartic protease; aspartic pro 6e-17
1htr_B329 Gastricsin; aspartyl protease; 1.62A {Homo sapiens 4e-16
1wkr_A340 Polyporopepsin; hydrolase, hydrolase-hydrolase inh 1e-15
2bju_A453 Plasmepsin II; aspartic proteinase, drug design, m 2e-15
1mpp_A361 Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu 7e-15
2apr_A325 Rhizopuspepsin; hydrolase (aspartic proteinase); 1 2e-14
1miq_A375 Plasmepsin; aspartic proteinase zymogen, domain op 2e-14
3qvc_A451 Histo-aspartic protease; HAP, plasmepsin, zymogen, 7e-14
1oew_A329 Endothiapepsin; hydrolase, aspartic proteinase mec 5e-13
1yg9_A330 Aspartic protease BLA G 2; allegren, hydrolase, al 7e-13
1ibq_A325 Aspergillopepsin; aspartic proteinase, hydrolase; 2e-11
1bxo_A323 Protein (penicillopepsin); hydrolase, phosphonate 5e-11
1izd_A323 Aspartic proteinase; sugar binding, acid protease, 2e-10
1lya_B241 Cathepsin D; lysosomal aspartic protease; HET: NAG 2e-10
1b5f_A239 Protein (cardosin A); hydrolase, aspartic proteina 5e-08
1b5f_B87 Protein (cardosin A); hydrolase, aspartic proteina 6e-08
1qdm_A478 Prophytepsin; aspartic proteinases, saposin-like d 2e-07
1qdm_A478 Prophytepsin; aspartic proteinases, saposin-like d 1e-06
1lya_A97 Cathepsin D; lysosomal aspartic protease; HET: NAG 5e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-04
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-04
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Length = 403 Back     alignment and structure
 Score =  238 bits (608), Expect = 2e-74
 Identities = 71/407 (17%), Positives = 126/407 (30%), Gaps = 59/407 (14%)

Query: 82  SSHSYGGYSISLSFGTPPQIIPFILDTGSHLVWFPCTNHYQCKYCSSSKIPSFIPKLSSS 141
           +  S G +  +L   TP   +P ++D   + +W  C    Q     + + P       S 
Sbjct: 16  NDGSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCE---QQYSSKTYQAPFCHSTQCSR 72

Query: 142 SRLLGCQNPKCSWIHHESIQCRDCNDEPLATSKNCTQICPSYLVLYGSG-LTEGIALSET 200
           +                + QC  C           T  C        +     G    + 
Sbjct: 73  AN---------------THQCLSCPAASRPGCHKNT--CGLMSTNPITQQTGLGELGEDV 115

Query: 201 LNL-----------PNRIIPNFLVGCSVLSSRQP------AGIAGFGRGKTSLPSQLN-- 241
           L +           P   +P FL  C+     Q        G+AG G    SLP+QL   
Sbjct: 116 LAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQKGLPRNTQGVAGLGHAPISLPNQLASH 175

Query: 242 ---LDKFSYCLLSHKFDDTTRTSSLILDNGSSHSDKKTTGLTYTPFVNNPSVAERNAFSV 298
                +F+ CL  +     T   ++I  +  ++  +      +      P          
Sbjct: 176 FGLQRQFTTCLSRY----PTSKGAIIFGDAPNNMRQFQNQDIFHDLAFTPLTITLQG--- 228

Query: 299 YYYVGLRRITVGGQRVR-VWHKYLTLDRDGNGGTIVDSGTTFTFMAPELFEPLADEFVSQ 357
            Y V +  I +    V  +     T+    +GGT++ + T    +   +++     F  Q
Sbjct: 229 EYNVRVNSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQ 288

Query: 358 MVKNRNYTRALGAEALTGLRPCFDVPGEKTGSFPELKLHFKGGAEVTLPVENYFAVVGEG 417
           + K          +++     CF+          +L +    G    +  E+       G
Sbjct: 289 LPKQAQ------VKSVAPFGLCFNSNKINAYPSVDLVMDKPNGPVWRISGEDLMVQAQPG 342

Query: 418 SAVCLTVVTDREASGGPSIILGNFQMQNYYVEYDLRNQRLGFKQQLC 464
              CL V+          I LG  Q++   V +DL   R+GF     
Sbjct: 343 -VTCLGVMNG-GMQPRAEITLGARQLEENLVVFDLARSRVGFSTSSL 387
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Length = 413 Back     alignment and structure
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Length = 381 Back     alignment and structure
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Length = 455 Back     alignment and structure
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Length = 334 Back     alignment and structure
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Length = 342 Back     alignment and structure
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Length = 342 Back     alignment and structure
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Length = 351 Back     alignment and structure
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Length = 383 Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} PDB: 3tne_A* Length = 339 Back     alignment and structure
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Length = 395 Back     alignment and structure
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Length = 383 Back     alignment and structure
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Length = 324 Back     alignment and structure
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Length = 323 Back     alignment and structure
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Length = 370 Back     alignment and structure
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Length = 329 Back     alignment and structure
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Length = 341 Back     alignment and structure
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Length = 329 Back     alignment and structure
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Length = 329 Back     alignment and structure
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 Length = 340 Back     alignment and structure
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Length = 453 Back     alignment and structure
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Length = 361 Back     alignment and structure
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Length = 325 Back     alignment and structure
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Length = 375 Back     alignment and structure
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Length = 451 Back     alignment and structure
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Length = 329 Back     alignment and structure
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Length = 330 Back     alignment and structure
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Length = 325 Back     alignment and structure
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Length = 323 Back     alignment and structure
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Length = 323 Back     alignment and structure
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B* Length = 241 Back     alignment and structure
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Length = 239 Back     alignment and structure
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Length = 87 Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Length = 478 Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Length = 478 Back     alignment and structure
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A* Length = 97 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query465
3psg_A370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 100.0
2x0b_A383 Renin; hydrolase-hormone complex, hydrolase hormon 100.0
1tzs_A351 Cathepsin E; hydrolase, aspartic protease, activat 100.0
1dpj_A329 Proteinase A; proteinase A, hydrolase-hydrolase in 100.0
3cms_A323 Chymosin B; hydrolase, acid proteinase; 2.00A {Bos 100.0
4aa9_A320 Chymosin; hydrolase, aspartic peptidase, rennet; H 100.0
1mpp_A361 Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu 100.0
1am5_A324 Pepsin, acid proteinase; aspartyl protease, hydrol 100.0
1miq_A375 Plasmepsin; aspartic proteinase zymogen, domain op 100.0
3vla_A413 EDGP; extracellular, inhibitor, plant protein; HET 100.0
1qdm_A478 Prophytepsin; aspartic proteinases, saposin-like d 100.0
3aup_A403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 100.0
3qvc_A451 Histo-aspartic protease; HAP, plasmepsin, zymogen, 100.0
3c9x_A329 Trichoderma reesei aspartic protease; aspartic pro 100.0
1htr_B329 Gastricsin; aspartyl protease; 1.62A {Homo sapiens 100.0
1oew_A329 Endothiapepsin; hydrolase, aspartic proteinase mec 100.0
1j71_A334 Candidapepsin, aspartic proteinase; candida tropic 100.0
3k1w_A341 Renin; protease, alternative splicing, aspartyl pr 100.0
2qzx_A342 Candidapepsin-5; aspartic proteinase, aspartyl pro 100.0
2bju_A453 Plasmepsin II; aspartic proteinase, drug design, m 100.0
2apr_A325 Rhizopuspepsin; hydrolase (aspartic proteinase); 1 100.0
3fv3_A339 SAPP1P-secreted aspartic protease 1; secreted aspa 100.0
1yg9_A330 Aspartic protease BLA G 2; allegren, hydrolase, al 100.0
3pvk_A342 Candidapepsin-2; hydrolase; 1.27A {Candida albican 100.0
1ibq_A325 Aspergillopepsin; aspartic proteinase, hydrolase; 100.0
1izd_A323 Aspartic proteinase; sugar binding, acid protease, 100.0
1bxo_A323 Protein (penicillopepsin); hydrolase, phosphonate 100.0
3lpj_A455 Beta-secretase 1; alzheimer'S, aspartyl protease, 100.0
1wkr_A340 Polyporopepsin; hydrolase, hydrolase-hydrolase inh 100.0
2ewy_A383 Beta-secretase 2; BACE2, aspartic protease, hydrol 100.0
2qp8_A395 Beta-secretase 1; BACE1, protease, alternative spl 100.0
3vf3_A402 Beta-secretase 1; structure-based drug design, hyd 100.0
1t6e_X381 Xylanase inhibitor; two beta-barrel domain structu 100.0
1b5f_A239 Protein (cardosin A); hydrolase, aspartic proteina 100.0
1lya_B241 Cathepsin D; lysosomal aspartic protease; HET: NAG 100.0
1lya_A97 Cathepsin D; lysosomal aspartic protease; HET: NAG 99.88
1b5f_B87 Protein (cardosin A); hydrolase, aspartic proteina 99.76
3s8i_A148 Protein DDI1 homolog 1; protease, structural genom 94.56
2i1a_A148 DNA damage-inducible protein DDI1; acid protease f 93.25
2i1a_A148 DNA damage-inducible protein DDI1; acid protease f 92.99
3s8i_A148 Protein DDI1 homolog 1; protease, structural genom 88.33
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Back     alignment and structure
Probab=100.00  E-value=9.2e-62  Score=482.86  Aligned_cols=306  Identities=24%  Similarity=0.356  Sum_probs=260.6

Q ss_pred             ceeeecccCCcccEEEEEeeCCCCcEEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCccCCCC
Q 012359           76 TTTTNISSHSYGGYSISLSFGTPPQIIPFILDTGSHLVWFPCTNHYQCKYCSSSKIPSFIPKLSSSSRLLGCQNPKCSWI  155 (465)
Q Consensus        76 ~~~~~l~~~~~~~y~~~i~iGtP~q~~~v~iDTGS~~~Wv~~~~~~~C~~C~~~~~~~y~p~~SsT~~~~~c~~~~c~~~  155 (465)
                      ....||.|+.+.+|+++|+||||||+|+|+|||||+++||+|.   .|..|.|+.++.|||++|+||+..+         
T Consensus        45 ~~~~~l~n~~d~~Y~~~i~iGTPpQ~~~v~~DTGSs~lWV~s~---~C~~~~C~~~~~y~~~~SsT~~~~~---------  112 (370)
T 3psg_A           45 IGDEPLENYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSV---YCSSLACSDHNQFNPDDSSTFEATS---------  112 (370)
T ss_dssp             SCCCTTGGGTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBT---TCCSGGGTTSCCBCGGGCTTCEEEE---------
T ss_pred             cceecceeccCCEEEEEEEEcCCCCEEEEEEeCCCCccEEECC---CCCCcccCCCCCCCCccCcCcEECC---------
Confidence            4567899999999999999999999999999999999999999   9998777779999999999999865         


Q ss_pred             ccCCCCCCCCCCCCccCCCCCccCCCceeEecCCceEEEeEEEEEEEcCCcccccEEEeceecCCC------CCCccccc
Q 012359          156 HHESIQCRDCNDEPLATSKNCTQICPSYLVLYGSGLTEGIALSETLNLPNRIIPNFLVGCSVLSSR------QPAGIAGF  229 (465)
Q Consensus       156 ~~~~~~c~~c~~~~~~~~~~c~~~C~~~~~~Yg~g~~~G~~~~D~v~~~~~~i~~~~fg~~~~~~~------~~~GilGL  229 (465)
                                              | .|.+.||+|++.|.+++|+|++++..++++.|||++....      ..+|||||
T Consensus       113 ------------------------~-~~~i~Yg~Gs~~G~~~~Dtv~ig~~~v~~~~Fg~a~~~~~~~~~~~~~dGIlGL  167 (370)
T 3psg_A          113 ------------------------Q-ELSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGSFLYYAPFDGILGL  167 (370)
T ss_dssp             ------------------------E-EEEEESSSCEEEEEEEEEEEEETTEEEEEEEEEEECSCCCGGGGGCSCSEEEEC
T ss_pred             ------------------------c-EEEEEeCCceEEEEEEEEEEeeCCcccCCeEEEEEEeecccccccCCccceecc
Confidence                                    1 8999999999999999999999999999999999986532      34999999


Q ss_pred             CCCCCCcc----------cc--cCCCeeeeecCCCCCCCCCCccceEEecCCCCCCcCCCCeeeeccccCCcccccCCcc
Q 012359          230 GRGKTSLP----------SQ--LNLDKFSYCLLSHKFDDTTRTSSLILDNGSSHSDKKTTGLTYTPFVNNPSVAERNAFS  297 (465)
Q Consensus       230 g~~~~sl~----------~q--l~~~~Fs~~l~~~~~~~~~~~~g~l~~Gg~d~~~~~~g~l~~~p~~~~~~~~~~~~~~  297 (465)
                      |++.++..          +|  +..++||+||.+.     ...+|.|+|||+|+++ +.|++.|+|+..          .
T Consensus       168 g~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~-----~~~~G~l~fGg~D~~~-y~g~l~~~pv~~----------~  231 (370)
T 3psg_A          168 AYPSISASGATPVFDNLWDQGLVSQDLFSVYLSSN-----DDSGSVVLLGGIDSSY-YTGSLNWVPVSV----------E  231 (370)
T ss_dssp             SCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEEC----------CEEEEETCCCGGG-BSSCCEEEECSE----------E
T ss_pred             CCccccccCCCCHHHHHHHCCCCCCCEEEEEEccC-----CCCCeEEEEEeeChHh-cCCcceeecccc----------c
Confidence            99876532          22  4558999999874     2358999999999998 999999999987          5


Q ss_pred             eeEEEEeeEEEECCEEEEeeccceecccCCCCceEEccccceeecChhhhHHHHHHHHHHhhcccccccccccccCCCCC
Q 012359          298 VYYYVGLRRITVGGQRVRVWHKYLTLDRDGNGGTIVDSGTTFTFMAPELFEPLADEFVSQMVKNRNYTRALGAEALTGLR  377 (465)
Q Consensus       298 ~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGt~~~~lp~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~  377 (465)
                      .+|.|.+++|+|+++.+..         .....++|||||+++++|++++++|.+++.+..           ...+.|.+
T Consensus       232 ~~w~v~l~~i~v~g~~~~~---------~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~-----------~~~g~~~v  291 (370)
T 3psg_A          232 GYWQITLDSITMDGETIAC---------SGGCQAIVDTGTSLLTGPTSAIANIQSDIGASE-----------NSDGEMVI  291 (370)
T ss_dssp             TTEEEEECEEESSSSEEEC---------TTCEEEEECTTCCSEEEEHHHHHHHHHHTTCEE-----------CTTCCEEC
T ss_pred             ceeEEEEeEEEECCEEEec---------CCCceEEEcCCCCcEECCHHHHHHHHHHhCCcc-----------cCCCcEEE
Confidence            7999999999999987652         234789999999999999999999988775432           23456789


Q ss_pred             CccccCCCCCccCCeEEEEEcCCcEEEecCCCeEEEecCCCeEEEEEEecCCC--CCCCceeecccceeeeEEEEeCCCC
Q 012359          378 PCFDVPGEKTGSFPELKLHFKGGAEVTLPVENYFAVVGEGSAVCLTVVTDREA--SGGPSIILGNFQMQNYYVEYDLRNQ  455 (465)
Q Consensus       378 ~C~~~~~~~~~~~p~i~f~f~gg~~~~l~~~~yi~~~~~~~~~C~~~i~~~~~--~~~~~~ILG~~fl~~~y~vfD~~~~  455 (465)
                      +|+..     ..+|+|+|+| +|++|+|++++|+++ .  ++.|+..+...+.  ..++.||||++|||++|+|||++++
T Consensus       292 ~C~~~-----~~lP~i~f~~-~g~~~~l~~~~yi~~-~--~~~C~~~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~  362 (370)
T 3psg_A          292 SCSSI-----DSLPDIVFTI-DGVQYPLSPSAYILQ-D--DDSCTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANN  362 (370)
T ss_dssp             CGGGG-----GGCCCEEEEE-TTEEEEECHHHHEEE-C--SSCEEESEEEECCCTTSCCEEEECHHHHTTEEEEEETTTT
T ss_pred             ECCCc-----ccCCcEEEEE-CCEEEEECHHHhccc-C--CCEEEEEEEeCCCCCCCCCcEEeChHHhcceEEEEECCCC
Confidence            99876     7899999999 899999999999998 2  4579987765321  2344799999999999999999999


Q ss_pred             EEEEecCC
Q 012359          456 RLGFKQQL  463 (465)
Q Consensus       456 ~iGfA~~~  463 (465)
                      |||||++.
T Consensus       363 riGfA~a~  370 (370)
T 3psg_A          363 KVGLAPVA  370 (370)
T ss_dssp             EEEEEEBC
T ss_pred             EEEEEEcC
Confidence            99999974
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Back     alignment and structure
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Back     alignment and structure
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Back     alignment and structure
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Back     alignment and structure
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A Back     alignment and structure
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Back     alignment and structure
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Back     alignment and structure
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Back     alignment and structure
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Back     alignment and structure
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Back     alignment and structure
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Back     alignment and structure
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Back     alignment and structure
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Back     alignment and structure
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Back     alignment and structure
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Back     alignment and structure
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Back     alignment and structure
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Back     alignment and structure
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Back     alignment and structure
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A* Back     alignment and structure
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Back     alignment and structure
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Back     alignment and structure
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Back     alignment and structure
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Back     alignment and structure
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Back     alignment and structure
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Back     alignment and structure
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 Back     alignment and structure
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Back     alignment and structure
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Back     alignment and structure
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ... Back     alignment and structure
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Back     alignment and structure
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B* Back     alignment and structure
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A* Back     alignment and structure
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens} Back     alignment and structure
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae} Back     alignment and structure
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae} Back     alignment and structure
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 465
d1t6ex_381 b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Tr 2e-44
d2qp8a1387 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Hum 8e-33
d1mppa_357 b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840] 3e-30
d1qdma2337 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase 4e-30
g1htr.1372 b.50.1.2 (P:,B:) Pepsin(ogen) {Human (Homo sapiens 7e-30
g1lya.1338 b.50.1.2 (A:,B:) Cathepsin D {Human (Homo sapiens) 3e-29
g1b5f.1326 b.50.1.2 (A:,B:) Plant acid proteinase, phytepsin 2e-28
d1dpja_329 b.50.1.2 (A:) Acid protease {Baker's yeast (Saccha 2e-27
d3cmsa_323 b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos 5e-27
d3psga_370 b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxI 6e-27
d1smra_335 b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mu 1e-26
d1hrna_337 b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Ho 2e-26
d1eaga_342 b.50.1.2 (A:) Acid protease {Yeast (Candida albica 2e-26
d1miqa_373 b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading e 2e-25
d2apra_325 b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus 6e-25
d1j71a_334 b.50.1.2 (A:) Acid protease {Yeast (Candida tropic 7e-24
d1am5a_324 b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus mo 5e-23
d2bjua1329 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrad 8e-22
d1oewa_330 b.50.1.2 (A:) Endothiapepsin {Chestnut blight fung 8e-22
d1wkra_340 b.50.1.2 (A:) Acid protease {Irpex lacteus (Polypo 2e-21
d1bxoa_323 b.50.1.2 (A:) Acid protease {Fungus (Penicillium j 3e-21
d1izea_323 b.50.1.2 (A:) Acid protease {Fungus (Aspergillus o 8e-19
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Length = 381 Back     information, alignment and structure

class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Xylanase inhibitor TAXI-I
species: Wheat (Triticum aestivum) [TaxId: 4565]

 Score =  157 bits (398), Expect = 2e-44
 Identities = 81/398 (20%), Positives = 134/398 (33%), Gaps = 67/398 (16%)

Query: 89  YSISLSFGTPPQIIPFILDTGSHLVWFPCTNHYQCKYCSSSKIPSFIPKLSSSSRLLGCQ 148
           Y+I    G        +LD    LVW  C      +  +     S    L+++    GC 
Sbjct: 16  YTIPFHDGAS-----LVLDVAGPLVWSTCD---GGQPPAEIPCSSPTCLLANAYPAPGCP 67

Query: 149 NPKCSWIHHESIQCRDCNDEPLATSKNCTQICPSYLVLYGSG-LTEGIALSETLNLPNRI 207
            P C                    S    + C +Y     SG    G             
Sbjct: 68  APSCG-------------------SDKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTD 108

Query: 208 IPNFLVGCSV-------------LSSRQPAGIAGFGRGKTSLPSQL-NLDKFSYCLLSHK 253
               +   +V                R   G+AG      +LP+Q+ +  K +   L   
Sbjct: 109 GSKPVSKVNVGVLAACAPSKLLASLPRGSTGVAGLANSGLALPAQVASAQKVANRFLL-- 166

Query: 254 FDDTTRTSSLILDNGSSHSDKKTTGLTYTPFVNNPSVAERNAFSVYYYVGLRRITVGGQR 313
              T      I   G     + T  + YTP V           S  +Y+  R I VG  R
Sbjct: 167 CLPTGGPGVAIFGGGPVPWPQFTQSMPYTPLVTKGG-------SPAHYISARSIVVGDTR 219

Query: 314 VRVWHKYLTLDRDGNGGTIVDSGTTFTFMAPELFEPLADEFVSQMVKNR--NYTRALGAE 371
           V V            GG ++ +   +  + P+++ PL D F   +          A   E
Sbjct: 220 VPV-----PEGALATGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVE 274

Query: 372 ALTGLRPCFDVPGEKTG----SFPELKLHFKGGAEVTLPVENYFAVVGEGSAVCLTVVT- 426
           A+     C+D           + P ++L   GG++ T+  +N    V +G+  C+  V  
Sbjct: 275 AVAPFGVCYDTKTLGNNLGGYAVPNVQLGLDGGSDWTMTGKNSMVDVKQGT-ACVAFVEM 333

Query: 427 ---DREASGGPSIILGNFQMQNYYVEYDLRNQRLGFKQ 461
                     P++ILG  QM+++ +++D+  +RLGF +
Sbjct: 334 KGVAAGDGRAPAVILGGAQMEDFVLDFDMEKKRLGFSR 371
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Length = 387 Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Length = 357 Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 337 Back     information, alignment and structure
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Length = 329 Back     information, alignment and structure
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Length = 323 Back     information, alignment and structure
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Length = 370 Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Length = 335 Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 Back     information, alignment and structure
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Length = 342 Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Length = 373 Back     information, alignment and structure
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Length = 325 Back     information, alignment and structure
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 334 Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Length = 324 Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Length = 329 Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Length = 340 Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Length = 323 Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Length = 323 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query465
d3psga_370 Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} 100.0
g1htr.1372 Pepsin(ogen) {Human (Homo sapiens), progastricsin 100.0
d1dpja_329 Acid protease {Baker's yeast (Saccharomyces cerevi 100.0
d1miqa_373 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 100.0
d2apra_325 Acid protease {Bread mold (Rhizopus chinensis) [Ta 100.0
d1oewa_330 Endothiapepsin {Chestnut blight fungus (Endothia p 100.0
d1j71a_334 Acid protease {Yeast (Candida tropicalis) [TaxId: 100.0
d1am5a_324 Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 100.0
d1smra_335 Chymosin (synonym: renin) {Mouse (Mus musculus) [T 100.0
d1hrna_337 Chymosin (synonym: renin) {Human (Homo sapiens) [T 100.0
d1mppa_357 Pepsin {Mucor pusillus [TaxId: 4840]} 100.0
d2bjua1329 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 100.0
d1eaga_342 Acid protease {Yeast (Candida albicans) [TaxId: 54 100.0
d2qp8a1387 beta-secretase (memapsin) {Human (Homo sapiens) [T 100.0
d1bxoa_323 Acid protease {Fungus (Penicillium janthinellum), 100.0
g1lya.1338 Cathepsin D {Human (Homo sapiens) [TaxId: 9606]} 100.0
d1izea_323 Acid protease {Fungus (Aspergillus oryzae) [TaxId: 100.0
d1wkra_340 Acid protease {Irpex lacteus (Polyporus tulipifera 100.0
d1qdma2337 Plant acid proteinase, phytepsin {Barley (Hordeum 100.0
d3cmsa_323 Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId 100.0
g1b5f.1326 Plant acid proteinase, phytepsin {Cynara carduncul 100.0
d1t6ex_381 Xylanase inhibitor TAXI-I {Wheat (Triticum aestivu 100.0
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Pepsin(ogen)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=100.00  E-value=2.2e-58  Score=457.97  Aligned_cols=306  Identities=24%  Similarity=0.343  Sum_probs=257.9

Q ss_pred             cceeeecccCCcccEEEEEeeCCCCcEEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCccCCC
Q 012359           75 TTTTTNISSHSYGGYSISLSFGTPPQIIPFILDTGSHLVWFPCTNHYQCKYCSSSKIPSFIPKLSSSSRLLGCQNPKCSW  154 (465)
Q Consensus        75 ~~~~~~l~~~~~~~y~~~i~iGtP~q~~~v~iDTGS~~~Wv~~~~~~~C~~C~~~~~~~y~p~~SsT~~~~~c~~~~c~~  154 (465)
                      .....||.+..+.+|+++|.||||||+++|+|||||+++||+|.   .|..|.++.++.|||++|+||+..+|       
T Consensus        44 ~~~~~~l~n~~d~~Y~~~i~iGtP~Q~~~vi~DTGSs~~Wv~~~---~C~~~~~~~~~~yd~~~Sst~~~~~~-------  113 (370)
T d3psga_          44 LIGDEPLENYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSV---YCSSLACSDHNQFNPDDSSTFEATSQ-------  113 (370)
T ss_dssp             SSCCCTTGGGTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBT---TCCSGGGTTSCCBCGGGCTTCEEEEE-------
T ss_pred             cccccccccccCCEEEEEEEEcCCCeEEEEEEeCCCCCeEEECc---cCCCcccccccccCCCcccccccCCC-------
Confidence            34567899988999999999999999999999999999999999   99999998899999999999988762       


Q ss_pred             CccCCCCCCCCCCCCccCCCCCccCCCceeEecCCceEEEeEEEEEEEcCCcccccEEEeceecCCC------CCCcccc
Q 012359          155 IHHESIQCRDCNDEPLATSKNCTQICPSYLVLYGSGLTEGIALSETLNLPNRIIPNFLVGCSVLSSR------QPAGIAG  228 (465)
Q Consensus       155 ~~~~~~~c~~c~~~~~~~~~~c~~~C~~~~~~Yg~g~~~G~~~~D~v~~~~~~i~~~~fg~~~~~~~------~~~GilG  228 (465)
                                                 .|.+.||+|++.|.++.|++.+++..++++.||++.....      ..+||+|
T Consensus       114 ---------------------------~~~~~Yg~Gs~~G~~~~d~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~Gi~g  166 (370)
T d3psga_         114 ---------------------------ELSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGSFLYYAPFDGILG  166 (370)
T ss_dssp             ---------------------------EEEEESSSCEEEEEEEEEEEEETTEEEEEEEEEEECSCCCGGGGGCSCSEEEE
T ss_pred             ---------------------------cEEEEeCCceEEEEEEEEEEeeeceeeeeeEEEEEeeccCceecccccccccc
Confidence                                       8999999999999999999999999999999999986532      2389999


Q ss_pred             cCCCCCCc------c----cc--cCCCeeeeecCCCCCCCCCCccceEEecCCCCCCcCCCCeeeeccccCCcccccCCc
Q 012359          229 FGRGKTSL------P----SQ--LNLDKFSYCLLSHKFDDTTRTSSLILDNGSSHSDKKTTGLTYTPFVNNPSVAERNAF  296 (465)
Q Consensus       229 Lg~~~~sl------~----~q--l~~~~Fs~~l~~~~~~~~~~~~g~l~~Gg~d~~~~~~g~l~~~p~~~~~~~~~~~~~  296 (465)
                      ||++..+.      .    .|  +..+.||+|+.+.     ...+|.|+|||+|+.+ +.+++.|+|+..          
T Consensus       167 l~~~~~~~~~~~~~~~~l~~~~~i~~~~fs~~l~~~-----~~~~g~l~~Gg~d~~~-~~~~l~~~p~~~----------  230 (370)
T d3psga_         167 LAYPSISASGATPVFDNLWDQGLVSQDLFSVYLSSN-----DDSGSVVLLGGIDSSY-YTGSLNWVPVSV----------  230 (370)
T ss_dssp             CSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEEC----------CEEEEETCCCGGG-BSSCCEEEECSE----------
T ss_pred             cccCcccccCCCchhhhhhhhcccccceeEEEeecC-----CCCCceEecCCcCchh-cccceeEEeecc----------
Confidence            99876442      2    22  3458999999764     2357899999999998 999999999976          


Q ss_pred             ceeEEEEeeEEEECCEEEEeeccceecccCCCCceEEccccceeecChhhhHHHHHHHHHHhhcccccccccccccCCCC
Q 012359          297 SVYYYVGLRRITVGGQRVRVWHKYLTLDRDGNGGTIVDSGTTFTFMAPELFEPLADEFVSQMVKNRNYTRALGAEALTGL  376 (465)
Q Consensus       297 ~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGt~~~~lp~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~  376 (465)
                      ..+|.|.++++.++++.+..         .....++|||||++++||++++++|++++.+...           ..+.+.
T Consensus       231 ~~~w~v~~~~i~v~g~~~~~---------~~~~~aiiDSGTs~~~lp~~~~~~i~~~l~~~~~-----------~~~~~~  290 (370)
T d3psga_         231 EGYWQITLDSITMDGETIAC---------SGGCQAIVDTGTSLLTGPTSAIANIQSDIGASEN-----------SDGEMV  290 (370)
T ss_dssp             ETTEEEEECEEESSSSEEEC---------TTCEEEEECTTCCSEEEEHHHHHHHHHHTTCEEC-----------TTCCEE
T ss_pred             cceEEEEEeeEEeCCeEEec---------CCCccEEEecCCceEeCCHHHHHHHHHHhCCeee-----------cCCcEE
Confidence            57999999999999988753         3346799999999999999999999987755322           245677


Q ss_pred             CCccccCCCCCccCCeEEEEEcCCcEEEecCCCeEEEecCCCeEEEEEEecC--CCCCCCceeecccceeeeEEEEeCCC
Q 012359          377 RPCFDVPGEKTGSFPELKLHFKGGAEVTLPVENYFAVVGEGSAVCLTVVTDR--EASGGPSIILGNFQMQNYYVEYDLRN  454 (465)
Q Consensus       377 ~~C~~~~~~~~~~~p~i~f~f~gg~~~~l~~~~yi~~~~~~~~~C~~~i~~~--~~~~~~~~ILG~~fl~~~y~vfD~~~  454 (465)
                      ++|+..     ..+|+|+|+| ||++|.|+|++|+++..   ..|...+...  ....++.||||++|||++|+|||+++
T Consensus       291 ~~C~~~-----~~~P~l~f~f-~g~~~~l~~~~yi~~~~---~~c~~~~~~~~~~~~~~~~~ILG~~flr~~y~vfD~~~  361 (370)
T d3psga_         291 ISCSSI-----DSLPDIVFTI-DGVQYPLSPSAYILQDD---DSCTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRAN  361 (370)
T ss_dssp             CCGGGG-----GGCCCEEEEE-TTEEEEECHHHHEEECS---SCEEESEEEECCCTTSCCEEEECHHHHTTEEEEEETTT
T ss_pred             Eecccc-----CCCceEEEEE-CCEEEEEChHHeEEEcC---CeEEEEEEEcccCCCCCCcEEECHHhhcCEEEEEECCC
Confidence            889876     7899999999 99999999999999764   3576554432  22345689999999999999999999


Q ss_pred             CEEEEecC
Q 012359          455 QRLGFKQQ  462 (465)
Q Consensus       455 ~~iGfA~~  462 (465)
                      +||||||+
T Consensus       362 ~~IGfAp~  369 (370)
T d3psga_         362 NKVGLAPV  369 (370)
T ss_dssp             TEEEEEEB
T ss_pred             CEEEEEec
Confidence            99999997
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Back     information, alignment and structure
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Back     information, alignment and structure
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Back     information, alignment and structure
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Back     information, alignment and structure
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Back     information, alignment and structure
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Back     information, alignment and structure