Citrus Sinensis ID: 012371

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-----
MASEKVETVVAGNYIEMEREEEDSKSSKSKLSSFFWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGLLSGILLQLFYGLMGSWTAYLISILYVEYRTRKEREKVDFRNHVIQWFEVLDGLLGKHWRNIGLFFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLIMTSFTAWYLTIASLVHGQVEGVKHSGPTKMVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKSIYLLATLYVLTLTLPSASAVYWAFGDMLLTHSNAFSLLPRTGFRDTAVILMLIHQFITFGFACTPLYFVWEKFIGVHNTKSTFKRALARLPVVIPIWFLAIIFPFFGPINSTVGSLLVSFTVYIIPALAHMITFAPAAARENAVERPPKCLGGWAGLYSLNIFVVVWVLVVGFGFGGWASMLNFIQQVDKFGLFTKCYQCPPHKV
cccccccccccccccccHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHcHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHcccEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccc
ccHHHHEEEEEcccccccccccccccccccHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHcccccHHHHHHHcccccHcHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHcccccHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHcHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHcccccccccccHHHHHHHHHHEEEHHHHHHHcHHHHHHHHHHHHHHHcccccHHccccccccc
MASEKVETVVAGNYIEmereeedsksskSKLSSFfwhggsvydaWFSCASNQVAQVLLTLPYSFSQLGLLSGILLQLFYGLMGSWTAYLISILYVEYRtrkerekvdfRNHVIQWFEVLDGLLGKHWRNIGLFFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGAccattvfipsfhnyRIWSFLGLIMTSFTAWYLTIASLVHgqvegvkhsgptKMVLYFTGATNILYTFGGHAVTVEIMHAmwkpqkfkSIYLLATLYVLTLTLPSASAVYWAFGDMLLThsnafsllprtgfrDTAVILMLIHQFITfgfactplYFVWEKFIGVHNTKSTFKRALARLPVVIPIWFLAIIfpffgpinstvgSLLVSFTVYIIPALAHMITfapaaarenaverppkclggwaglySLNIFVVVWVLVVGFGFGGWASMLNFIQQVDKFglftkcyqcpphkv
masekvetvvagnyiemereeedsksskSKLSSFFWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGLLSGILLQLFYGLMGSWTAYLISILYVEYRTRKEREKVDFRNHVIQWFEVLDGLLGKHWRNIGLFFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLIMTSFTAWYLTIASLVHGQVEGVKHSGPTKMVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKSIYLLATLYVLTLTLPSASAVYWAFGDMLLTHSNAFSLLPRTGFRDTAVILMLIHQFITFGFACTPLYFVWEKFIGVHNTKSTFKRALARLPVVIPIWFLAIIFPFFGPINSTVGSLLVSFTVYIIPALAHMITFAPAAARENAVERPPKCLGGWAGLYSLNIFVVVWVLVVGFGFGGWASMLNFIQQVDKFGLFTKCYQCPPHKV
MASEKVETVVAGNYIEMEREEEDskssksklssFFWHGGSVYDAWFSCASNQVAQVLLTLPYsfsqlgllsgillqlfyglMGSWTAYLISILYVEYRTRKEREKVDFRNHVIQWFEVLDGLLGKHWRNIGLFFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLIMTSFTAWYLTIASLVHGQVEGVKHSGPTKMVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKSIyllatlyvltltlPSASAVYWAFGDMLLTHSNAFSLLPRTGFRDTAVILMLIHQFITFGFACTPLYFVWEKFIGVHNTKSTFKRALARLPVVIPIWFLAIIFPFFGPINSTVGSLLVSFTVYIIPALAHMITFAPAAARENAVERPPKCLGGWAGLYSLNIfvvvwvlvvgfgfggwASMLNFIQQVDKFGLFTKCYQCPPHKV
********************************SFFWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGLLSGILLQLFYGLMGSWTAYLISILYVEYRTRKEREKVDFRNHVIQWFEVLDGLLGKHWRNIGLFFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLIMTSFTAWYLTIASLVHGQVEGVKHSGPTKMVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKSIYLLATLYVLTLTLPSASAVYWAFGDMLLTHSNAFSLLPRTGFRDTAVILMLIHQFITFGFACTPLYFVWEKFIGVHNTKSTFKRALARLPVVIPIWFLAIIFPFFGPINSTVGSLLVSFTVYIIPALAHMITFAPAAARENAVERPPKCLGGWAGLYSLNIFVVVWVLVVGFGFGGWASMLNFIQQVDKFGLFTKCYQC*****
**********************************FWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGLLSGILLQLFYGLMGSWTAYLISILYVEYRTRKEREKVDFRNHVIQWFEVLDGLLGKHWRNIGLFFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLIMTSFTAWYLTIASLVHGQVEGVKHSGPTKMVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKSIYLLATLYVLTLTLPSASAVYWAFGDMLLTHSNAFSLLPRTGFRDTAVILMLIHQFITFGFACTPLYFVWEKFIGVHNTKSTFKRALARLPVVIPIWFLAIIFPFFGPINSTVGSLLVSFTVYIIPALAHMITFAPAAA***AVERPPKCLGGWAGLYSLNIFVVVWVLVVGFGFGGWASMLNFIQQVDKFGLFTKCYQCPP***
MASEKVETVVAGNYIEM*************LSSFFWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGLLSGILLQLFYGLMGSWTAYLISILYVEYRTRKEREKVDFRNHVIQWFEVLDGLLGKHWRNIGLFFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLIMTSFTAWYLTIASLVHGQVEGVKHSGPTKMVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKSIYLLATLYVLTLTLPSASAVYWAFGDMLLTHSNAFSLLPRTGFRDTAVILMLIHQFITFGFACTPLYFVWEKFIGVHNTKSTFKRALARLPVVIPIWFLAIIFPFFGPINSTVGSLLVSFTVYIIPALAHMITFAPAAARENAVERPPKCLGGWAGLYSLNIFVVVWVLVVGFGFGGWASMLNFIQQVDKFGLFTKCYQCPPHKV
****KVETVVAGNYI*************SKLSSFFWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGLLSGILLQLFYGLMGSWTAYLISILYVEYRTRKEREKVDFRNHVIQWFEVLDGLLGKHWRNIGLFFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLIMTSFTAWYLTIASLVHGQVEGVKHSGPTKMVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKSIYLLATLYVLTLTLPSASAVYWAFGDMLLTHSNAFSLLPRTGFRDTAVILMLIHQFITFGFACTPLYFVWEKFIGVHNTKSTFKRALARLPVVIPIWFLAIIFPFFGPINSTVGSLLVSFTVYIIPALAHMITFAPAAARENAVERPPKCLGGWAGLYSLNIFVVVWVLVVGFGFGGWASMLNFIQQVDKFGLFTKCYQCPPH**
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooo
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MASEKVETVVAGNYIEMEREEEDSKSSKSKLSSFFWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGLLSGILLQLFYGLMGSWTAYLISILYVEYRTRKEREKVDFRNHVIQWFEVLDGLLGKHWRNIGLFFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLIMTSFTAWYLTIASLVHGQVEGVKHSGPTKMVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKSIYLLATLYVLTLTLPSASAVYWAFGDMLLTHSNAFSLLPRTGFRDTAVILMLIHQFITFGFACTPLYFVWEKFIGVHNTKSTFKRALARLPVVIPIWFLAIIFPFFGPINSTVGSLLVSFTVYIIPALAHMITFAPAAARENAVERPPKCLGGWAGLYSLNIFVVVWVLVVGFGFGGWASMLNFIQQVDKFGLFTKCYQCPPHKV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query465 2.2.26 [Sep-21-2011]
Q9FEL6465 Auxin transporter-like pr N/A no 0.997 0.997 0.890 0.0
Q9CA25470 Auxin transporter-like pr yes no 0.997 0.987 0.876 0.0
Q8L883490 Auxin transporter-like pr N/A no 0.993 0.942 0.838 0.0
Q9S836483 Auxin transporter-like pr no no 0.984 0.948 0.838 0.0
Q53JG7480 Putative auxin transporte no no 0.995 0.964 0.789 0.0
Q7XGU4547 Auxin transporter-like pr no no 0.941 0.800 0.821 0.0
Q96247485 Auxin transporter protein no no 0.987 0.946 0.784 0.0
Q9LFB2488 Auxin transporter-like pr no no 0.976 0.930 0.796 0.0
Q8L884482 Auxin transporter-like pr N/A no 0.989 0.954 0.772 0.0
Q9FEL7484 Auxin transporter-like pr N/A no 0.989 0.950 0.761 0.0
>sp|Q9FEL6|LAX3_MEDTR Auxin transporter-like protein 3 OS=Medicago truncatula GN=LAX3 PE=2 SV=1 Back     alignment and function desciption
 Score =  854 bits (2207), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 413/464 (89%), Positives = 438/464 (94%)

Query: 1   MASEKVETVVAGNYIEMEREEEDSKSSKSKLSSFFWHGGSVYDAWFSCASNQVAQVLLTL 60
           M SEKVETVVAGNY+EMEREEE SKS+  KLS FFWHGGSVYDAWFSCASNQVAQVLLTL
Sbjct: 1   MTSEKVETVVAGNYLEMEREEEGSKSTTGKLSKFFWHGGSVYDAWFSCASNQVAQVLLTL 60

Query: 61  PYSFSQLGLLSGILLQLFYGLMGSWTAYLISILYVEYRTRKEREKVDFRNHVIQWFEVLD 120
           PYSFSQLG+LSGIL Q+FYGLMGSWTAY+IS+LYVEYRTRKEREKVDFRNHVIQWFEVLD
Sbjct: 61  PYSFSQLGMLSGILFQIFYGLMGSWTAYIISVLYVEYRTRKEREKVDFRNHVIQWFEVLD 120

Query: 121 GLLGKHWRNIGLFFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFI 180
           GLLGKHWRN+GLFFNCTFLLFGSVIQLIACASNIYYIND+LDKRTWTYIFGACCATTVFI
Sbjct: 121 GLLGKHWRNLGLFFNCTFLLFGSVIQLIACASNIYYINDHLDKRTWTYIFGACCATTVFI 180

Query: 181 PSFHNYRIWSFLGLIMTSFTAWYLTIASLVHGQVEGVKHSGPTKMVLYFTGATNILYTFG 240
           PSFHNYRIWSFLGL+MT++TAWY+TIAS++HGQ E VKHSGPTK+VLYFTGATNILYTFG
Sbjct: 181 PSFHNYRIWSFLGLVMTTYTAWYMTIASILHGQAEDVKHSGPTKLVLYFTGATNILYTFG 240

Query: 241 GHAVTVEIMHAMWKPQKFKSIYLLATLYVLTLTLPSASAVYWAFGDMLLTHSNAFSLLPR 300
           GHAVTVEIMHAMWKPQKFK IYL+ATLYV+TLTLPSA+AVYWAFGD LLTHSNA SLLPR
Sbjct: 241 GHAVTVEIMHAMWKPQKFKMIYLIATLYVMTLTLPSAAAVYWAFGDNLLTHSNALSLLPR 300

Query: 301 TGFRDTAVILMLIHQFITFGFACTPLYFVWEKFIGVHNTKSTFKRALARLPVVIPIWFLA 360
           TGFRDTAVILMLIHQFITFGFACTPLYFVWEKF+GVH TKS  KRAL RLPVVIPIWFLA
Sbjct: 301 TGFRDTAVILMLIHQFITFGFACTPLYFVWEKFLGVHETKSLLKRALVRLPVVIPIWFLA 360

Query: 361 IIFPFFGPINSTVGSLLVSFTVYIIPALAHMITFAPAAARENAVERPPKCLGGWAGLYSL 420
           IIFPFFGPINSTVGSLLVSFTVYIIPALAHM+TFA A ARENAVERPP  LGGW GLYS+
Sbjct: 361 IIFPFFGPINSTVGSLLVSFTVYIIPALAHMVTFASAPARENAVERPPSFLGGWVGLYSV 420

Query: 421 NIFVVVWVLVVGFGFGGWASMLNFIQQVDKFGLFTKCYQCPPHK 464
           N+FV VWVLVVGFG GGWASMLNF+ Q+  FGLF KC+QCPPHK
Sbjct: 421 NVFVAVWVLVVGFGLGGWASMLNFVHQIKTFGLFAKCFQCPPHK 464
Carrier protein involved in proton-driven auxin influx. Mediates the formation of auxin gradient from developing leaves (site of auxin biosynthesis) to tips by contributing to the loading of auxin in vascular tissues and facilitating acropetal (base to tip) auxin transport within inner tissues of the root apex, and basipetal (tip to base) auxin transport within outer tissues of the root apex (By similarity). May be involved in lateral roots and nodules formation.
Medicago truncatula (taxid: 3880)
>sp|Q9CA25|LAX3_ARATH Auxin transporter-like protein 3 OS=Arabidopsis thaliana GN=LAX3 PE=2 SV=1 Back     alignment and function description
>sp|Q8L883|LAX5_MEDTR Auxin transporter-like protein 5 OS=Medicago truncatula GN=LAX5 PE=2 SV=1 Back     alignment and function description
>sp|Q9S836|LAX2_ARATH Auxin transporter-like protein 2 OS=Arabidopsis thaliana GN=LAX2 PE=2 SV=1 Back     alignment and function description
>sp|Q53JG7|LAX4_ORYSJ Putative auxin transporter-like protein 4 OS=Oryza sativa subsp. japonica GN=Os11g0169200 PE=2 SV=1 Back     alignment and function description
>sp|Q7XGU4|LAX3_ORYSJ Auxin transporter-like protein 3 OS=Oryza sativa subsp. japonica GN=Os10g0147400 PE=2 SV=1 Back     alignment and function description
>sp|Q96247|AUX1_ARATH Auxin transporter protein 1 OS=Arabidopsis thaliana GN=AUX1 PE=1 SV=1 Back     alignment and function description
>sp|Q9LFB2|LAX1_ARATH Auxin transporter-like protein 1 OS=Arabidopsis thaliana GN=LAX1 PE=1 SV=1 Back     alignment and function description
>sp|Q8L884|LAX4_MEDTR Auxin transporter-like protein 4 OS=Medicago truncatula GN=LAX4 PE=2 SV=1 Back     alignment and function description
>sp|Q9FEL7|LAX2_MEDTR Auxin transporter-like protein 2 OS=Medicago truncatula GN=LAX2 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query465
365189138465 auxin influx carrier protein [Mangifera 0.997 0.997 0.937 0.0
126217796465 auxin influx transport protein [Casuarin 0.997 0.997 0.911 0.0
126217798465 auxin influx transport protein [Casuarin 0.997 0.997 0.909 0.0
449445250466 PREDICTED: auxin transporter-like protei 0.997 0.995 0.911 0.0
449533096466 PREDICTED: LOW QUALITY PROTEIN: auxin tr 0.997 0.995 0.909 0.0
225459481464 PREDICTED: auxin transporter-like protei 0.991 0.993 0.904 0.0
356515856465 PREDICTED: auxin transporter-like protei 0.997 0.997 0.909 0.0
388510998465 unknown [Lotus japonicus] 0.997 0.997 0.905 0.0
356509446465 PREDICTED: auxin transporter-like protei 0.997 0.997 0.905 0.0
350539519468 LAX3 protein [Solanum lycopersicum] gi|3 0.997 0.991 0.877 0.0
>gi|365189138|emb|CCF23026.1| auxin influx carrier protein [Mangifera indica] gi|381280183|gb|AFG18186.1| auxin influx carrier component [Mangifera indica] Back     alignment and taxonomy information
 Score =  914 bits (2362), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 435/464 (93%), Positives = 453/464 (97%)

Query: 1   MASEKVETVVAGNYIEMEREEEDSKSSKSKLSSFFWHGGSVYDAWFSCASNQVAQVLLTL 60
           MASEKVETV+AG+YIEMERE EDSKS+K K SSFFWHGGS YDAWFSCASNQVAQVLLTL
Sbjct: 1   MASEKVETVIAGSYIEMEREGEDSKSAKGKFSSFFWHGGSAYDAWFSCASNQVAQVLLTL 60

Query: 61  PYSFSQLGLLSGILLQLFYGLMGSWTAYLISILYVEYRTRKEREKVDFRNHVIQWFEVLD 120
           PYSFSQLG+LSGIL QLFYGLMGSWTAYLI++LYVEYRTRKEREKVDFRNHVIQWFEVLD
Sbjct: 61  PYSFSQLGMLSGILFQLFYGLMGSWTAYLITVLYVEYRTRKEREKVDFRNHVIQWFEVLD 120

Query: 121 GLLGKHWRNIGLFFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFI 180
           GLLGKHWRNIGLFFNCTFLLFGSVIQLIACASNI+YINDNLDKRTWTYIFGACCATTVFI
Sbjct: 121 GLLGKHWRNIGLFFNCTFLLFGSVIQLIACASNIHYINDNLDKRTWTYIFGACCATTVFI 180

Query: 181 PSFHNYRIWSFLGLIMTSFTAWYLTIASLVHGQVEGVKHSGPTKMVLYFTGATNILYTFG 240
           PSFHNYRIWSF+GL+MT++TAWYLTIASL+HGQVEGVKHSGPTKMVLYFTGATNILYTFG
Sbjct: 181 PSFHNYRIWSFVGLMMTTYTAWYLTIASLIHGQVEGVKHSGPTKMVLYFTGATNILYTFG 240

Query: 241 GHAVTVEIMHAMWKPQKFKSIYLLATLYVLTLTLPSASAVYWAFGDMLLTHSNAFSLLPR 300
           GHAVTVEIMHAMWKPQKFK IYL+ATLYVLTLTLPSASAVYWAFGDMLLTH+NAFSLLPR
Sbjct: 241 GHAVTVEIMHAMWKPQKFKVIYLMATLYVLTLTLPSASAVYWAFGDMLLTHANAFSLLPR 300

Query: 301 TGFRDTAVILMLIHQFITFGFACTPLYFVWEKFIGVHNTKSTFKRALARLPVVIPIWFLA 360
           TGFRD+AVILMLIHQFITFGFACTPLYFVWEK IG HNTKS FKRALARLPVVIPIWFLA
Sbjct: 301 TGFRDSAVILMLIHQFITFGFACTPLYFVWEKLIGAHNTKSIFKRALARLPVVIPIWFLA 360

Query: 361 IIFPFFGPINSTVGSLLVSFTVYIIPALAHMITFAPAAARENAVERPPKCLGGWAGLYSL 420
           IIFPFFGPINSTVGSLLVSFTVYIIPALAHM+TFAPAAARENAVERPPKCLGGWAGLYS+
Sbjct: 361 IIFPFFGPINSTVGSLLVSFTVYIIPALAHMVTFAPAAARENAVERPPKCLGGWAGLYSM 420

Query: 421 NIFVVVWVLVVGFGFGGWASMLNFIQQVDKFGLFTKCYQCPPHK 464
           N FVVVWVL+VGFGFGGWASMLNFIQQVD FGLFTKCYQCPPHK
Sbjct: 421 NSFVVVWVLIVGFGFGGWASMLNFIQQVDTFGLFTKCYQCPPHK 464

Source: Mangifera indica

Species: Mangifera indica

Genus: Mangifera

Family: Anacardiaceae

Order: Sapindales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|126217796|gb|ABN81351.1| auxin influx transport protein [Casuarina glauca] Back     alignment and taxonomy information
>gi|126217798|gb|ABN81352.1| auxin influx transport protein [Casuarina glauca] Back     alignment and taxonomy information
>gi|449445250|ref|XP_004140386.1| PREDICTED: auxin transporter-like protein 3-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449533096|ref|XP_004173513.1| PREDICTED: LOW QUALITY PROTEIN: auxin transporter-like protein 3-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|225459481|ref|XP_002285836.1| PREDICTED: auxin transporter-like protein 3 [Vitis vinifera] gi|302141859|emb|CBI19062.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356515856|ref|XP_003526613.1| PREDICTED: auxin transporter-like protein 3-like [Glycine max] Back     alignment and taxonomy information
>gi|388510998|gb|AFK43565.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|356509446|ref|XP_003523460.1| PREDICTED: auxin transporter-like protein 3-like [Glycine max] Back     alignment and taxonomy information
>gi|350539519|ref|NP_001234682.1| LAX3 protein [Solanum lycopersicum] gi|337271824|gb|AEI69670.1| LAX3 protein [Solanum lycopersicum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query465
TAIR|locus:2203226470 LAX3 "AT1G77690" [Arabidopsis 0.997 0.987 0.773 9.4e-201
TAIR|locus:2047102483 LAX2 "AT2G21050" [Arabidopsis 0.984 0.948 0.745 6e-190
TAIR|locus:2005496485 AUX1 "AT2G38120" [Arabidopsis 0.991 0.950 0.690 3.2e-175
TAIR|locus:2150089488 LAX1 "AT5G01240" [Arabidopsis 0.980 0.934 0.702 3.2e-175
WB|WBGene00012529519 Y32F6A.4 [Caenorhabditis elega 0.658 0.589 0.220 8.4e-10
TAIR|locus:2013056448 AT1G71680 [Arabidopsis thalian 0.503 0.522 0.257 1.8e-07
TAIR|locus:2008154453 AT1G48640 [Arabidopsis thalian 0.486 0.498 0.247 1.1e-06
WB|WBGene00019837494 R02F2.8 [Caenorhabditis elegan 0.597 0.562 0.209 1.3e-05
TAIR|locus:2008605441 AT1G67640 "AT1G67640" [Arabido 0.486 0.512 0.229 4.8e-05
TAIR|locus:2031215440 AT1G25530 [Arabidopsis thalian 0.486 0.513 0.241 6.2e-05
TAIR|locus:2203226 LAX3 "AT1G77690" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1943 (689.0 bits), Expect = 9.4e-201, P = 9.4e-201
 Identities = 363/469 (77%), Positives = 386/469 (82%)

Query:     1 MASEKVETVVAGNYIEMEREEEDXX-----XXXXXXXXFFWHGGSVYDAWFSCASNQVAQ 55
             MA+EK+ETVVAGNY+EMEREEE+               FFWHGGSVYDAWFSCASNQVAQ
Sbjct:     1 MAAEKIETVVAGNYLEMEREEENISGNKKSSTKTKLSNFFWHGGSVYDAWFSCASNQVAQ 60

Query:    56 VLLTLPYXXXXXXXXXXXXXXXXXXXMGSWTAYLISILYVEYRTRKEREKVDFRNHVIQW 115
             VLLTLPY                   MGSWTAYLIS+LYVEYRTRKEREK DFRNHVIQW
Sbjct:    61 VLLTLPYSFSQLGMMSGILFQLFYGLMGSWTAYLISVLYVEYRTRKEREKFDFRNHVIQW 120

Query:   116 FEVLDGLLGKHWRNIGLFFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCA 175
             FEVLDGLLGKHWRN+GL FNCTFLLFGSVIQLIACASNIYYIND LDKRTWTYIFGACCA
Sbjct:   121 FEVLDGLLGKHWRNLGLIFNCTFLLFGSVIQLIACASNIYYINDKLDKRTWTYIFGACCA 180

Query:   176 TTVFIPSFHNYRIWSFLGLIMTSFTAWYLTIASLVHGQVEGVKHSGPTKMVLYFTGATNI 235
             TTVFIPSFHNYRIWSFLGL MT++T+WYLTIASL+HGQ E VKHSGPT MVLYFTGATNI
Sbjct:   181 TTVFIPSFHNYRIWSFLGLAMTTYTSWYLTIASLLHGQAEDVKHSGPTTMVLYFTGATNI 240

Query:   236 LYTFGGHAVTVEIMHAMWKPQKFKSIXXXXXXXXXXXXXPSASAVYWAFGDMLLTHSNAF 295
             LYTFGGHAVTVEIMHAMWKPQKFK+I             PSASAVYWAFGD LLTHSNA 
Sbjct:   241 LYTFGGHAVTVEIMHAMWKPQKFKAIYLLATIYVLTLTLPSASAVYWAFGDKLLTHSNAL 300

Query:   296 SLLPRTGFRDTAVILMLIHQFITFGFACTPLYFVWEKFIGVHNTKSTFKRALARLPVVIP 355
             SLLP+TGFRDTAVILMLIHQFITFGFA TPLYFVWEK IGVH TKS FKRA+ARLPVV+P
Sbjct:   301 SLLPKTGFRDTAVILMLIHQFITFGFASTPLYFVWEKLIGVHETKSMFKRAMARLPVVVP 360

Query:   356 IWFLAIIFPFFGPINSTVGSLLVSFTVYIIPALAHMITFAPAAARENAVERPPKCLGGWA 415
             IWFLAIIFPFFGPINS VGSLLVSFTVYIIPALAHM+TFAPA +RENAVERPP+ +GGW 
Sbjct:   361 IWFLAIIFPFFGPINSAVGSLLVSFTVYIIPALAHMLTFAPAPSRENAVERPPRVVGGWM 420

Query:   416 GLYSLNIXXXXXXXXXXXXXXXXASMLNFIQQVDKFGLFTKCYQCPPHK 464
             G Y +NI                ASM+NF++Q+D FGLFTKCYQCPPHK
Sbjct:   421 GTYCINIFVVVWVFVVGFGFGGWASMVNFVRQIDTFGLFTKCYQCPPHK 469
GO:0005215 "transporter activity" evidence=ISS
GO:0005886 "plasma membrane" evidence=ISM
GO:0006865 "amino acid transport" evidence=ISS;RCA
GO:0015171 "amino acid transmembrane transporter activity" evidence=ISS
GO:0016020 "membrane" evidence=ISS
GO:0009733 "response to auxin stimulus" evidence=RCA;IDA
GO:0009926 "auxin polar transport" evidence=IDA
GO:0010311 "lateral root formation" evidence=IGI
GO:0010328 "auxin influx transmembrane transporter activity" evidence=IDA
GO:0048829 "root cap development" evidence=IGI
GO:0000271 "polysaccharide biosynthetic process" evidence=RCA
GO:0006084 "acetyl-CoA metabolic process" evidence=RCA
GO:0009825 "multidimensional cell growth" evidence=RCA
GO:0009932 "cell tip growth" evidence=RCA
GO:0010583 "response to cyclopentenone" evidence=RCA
GO:0010817 "regulation of hormone levels" evidence=RCA
GO:0016126 "sterol biosynthetic process" evidence=RCA
GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA
GO:0043481 "anthocyanin accumulation in tissues in response to UV light" evidence=RCA
GO:0048767 "root hair elongation" evidence=RCA
GO:0071555 "cell wall organization" evidence=RCA
TAIR|locus:2047102 LAX2 "AT2G21050" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2005496 AUX1 "AT2G38120" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2150089 LAX1 "AT5G01240" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
WB|WBGene00012529 Y32F6A.4 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
TAIR|locus:2013056 AT1G71680 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2008154 AT1G48640 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
WB|WBGene00019837 R02F2.8 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
TAIR|locus:2008605 AT1G67640 "AT1G67640" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031215 AT1G25530 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9LFB2LAX1_ARATHNo assigned EC number0.79690.97630.9303nono
Q9CA25LAX3_ARATHNo assigned EC number0.87630.99780.9872yesno
Q53JG7LAX4_ORYSJNo assigned EC number0.78910.99560.9645nono
Q96247AUX1_ARATHNo assigned EC number0.78460.98700.9463nono
Q9FEL7LAX2_MEDTRNo assigned EC number0.76180.98920.9504N/Ano
Q9FEL6LAX3_MEDTRNo assigned EC number0.89000.99780.9978N/Ano
Q8L884LAX4_MEDTRNo assigned EC number0.77250.98920.9543N/Ano
Q5N892LAX1_ORYSJNo assigned EC number0.81790.93330.8821nono
Q688J2LAX2_ORYSJNo assigned EC number0.76970.98700.9522nono
Q8L883LAX5_MEDTRNo assigned EC number0.83800.99350.9428N/Ano
Q9S836LAX2_ARATHNo assigned EC number0.83870.98490.9482nono
Q7XGU4LAX3_ORYSJNo assigned EC number0.82190.94190.8007nono
Q9FEL8LAX1_MEDTRNo assigned EC number0.81460.93970.9123N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
PtrAUX8
SubName- Full=Putative uncharacterized protein; (465 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query465
PLN03074473 PLN03074, PLN03074, auxin influx permease; Provisi 0.0
pfam01490406 pfam01490, Aa_trans, Transmembrane amino acid tran 1e-72
>gnl|CDD|215559 PLN03074, PLN03074, auxin influx permease; Provisional Back     alignment and domain information 
 Score =  925 bits (2392), Expect = 0.0
 Identities = 385/471 (81%), Positives = 421/471 (89%), Gaps = 6/471 (1%)

Query: 1   MASEKVETVVAGNYIEMERE------EEDSKSSKSKLSSFFWHGGSVYDAWFSCASNQVA 54
           MA ++ ET + GNY+EME E      E      KS+L S  WHGGSVYDAWFSCASNQVA
Sbjct: 2   MAGKQAETAIVGNYVEMEVEGGGEKEEGGGGGGKSRLKSLLWHGGSVYDAWFSCASNQVA 61

Query: 55  QVLLTLPYSFSQLGLLSGILLQLFYGLMGSWTAYLISILYVEYRTRKEREKVDFRNHVIQ 114
           QVLLTLPYSFSQLG+LSGIL Q+FYGL+GSWTAYLIS+LYVEYR RKEREKVDF+NHVIQ
Sbjct: 62  QVLLTLPYSFSQLGMLSGILFQIFYGLLGSWTAYLISVLYVEYRARKEREKVDFKNHVIQ 121

Query: 115 WFEVLDGLLGKHWRNIGLFFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACC 174
           WFEVLDGLLG +W+N+GL FNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACC
Sbjct: 122 WFEVLDGLLGPYWKNVGLAFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACC 181

Query: 175 ATTVFIPSFHNYRIWSFLGLIMTSFTAWYLTIASLVHGQVEGVKHSGPTKMVLYFTGATN 234
           ATTVFIPSFHNYRIWSFLGL+MT++TAWY+TIA+L HGQVEGVKHSGPTK+VLYFTGATN
Sbjct: 182 ATTVFIPSFHNYRIWSFLGLLMTTYTAWYMTIAALSHGQVEGVKHSGPTKLVLYFTGATN 241

Query: 235 ILYTFGGHAVTVEIMHAMWKPQKFKSIYLLATLYVLTLTLPSASAVYWAFGDMLLTHSNA 294
           ILYTFGGHAVTVEIMHAMWKPQKFK IYL ATLYVLTLTLPSA+AVYWAFGD LLTHSNA
Sbjct: 242 ILYTFGGHAVTVEIMHAMWKPQKFKYIYLAATLYVLTLTLPSAAAVYWAFGDELLTHSNA 301

Query: 295 FSLLPRTGFRDTAVILMLIHQFITFGFACTPLYFVWEKFIGVHNTKSTFKRALARLPVVI 354
           FSLLPR+G+RD AVILMLIHQFITFGFACTPLYFVWEK IGVH+TKS   RALARLPVV+
Sbjct: 302 FSLLPRSGWRDAAVILMLIHQFITFGFACTPLYFVWEKAIGVHDTKSICLRALARLPVVV 361

Query: 355 PIWFLAIIFPFFGPINSTVGSLLVSFTVYIIPALAHMITFAPAAARENAVERPPKCLGGW 414
           PIWFLAIIFPFFGPINS VG+LLVSFTVYIIP+LAHM+T+  A+AR+NA E+PP  L  W
Sbjct: 362 PIWFLAIIFPFFGPINSAVGALLVSFTVYIIPSLAHMLTYRSASARQNAAEKPPFFLPSW 421

Query: 415 AGLYSLNIFVVVWVLVVGFGFGGWASMLNFIQQVDKFGLFTKCYQCPPHKV 465
            G+Y +N FVVVWVLVVGFGFGGWASM NF++Q+D FGLF KCYQCPP   
Sbjct: 422 TGMYVVNAFVVVWVLVVGFGFGGWASMTNFVRQIDTFGLFAKCYQCPPPSP 472

Length = 473
>gnl|CDD|216528 pfam01490, Aa_trans, Transmembrane amino acid transporter protein Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 465
PLN03074473 auxin influx permease; Provisional 100.0
KOG1304449 consensus Amino acid transporters [Amino acid tran 100.0
KOG1303437 consensus Amino acid transporters [Amino acid tran 100.0
PTZ00206467 amino acid transporter; Provisional 100.0
PF01490409 Aa_trans: Transmembrane amino acid transporter pro 100.0
KOG1305411 consensus Amino acid transporter protein [Amino ac 100.0
KOG4303524 consensus Vesicular inhibitory amino acid transpor 100.0
COG0814415 SdaC Amino acid permeases [Amino acid transport an 100.0
PRK10483414 tryptophan permease; Provisional 99.93
PRK09664415 tryptophan permease TnaB; Provisional 99.93
PF03222394 Trp_Tyr_perm: Tryptophan/tyrosine permease family; 99.92
TIGR00837381 araaP aromatic amino acid transport protein. aroma 99.92
PRK15132403 tyrosine transporter TyrP; Provisional 99.91
PRK13629443 threonine/serine transporter TdcC; Provisional 99.84
TIGR00814397 stp serine transporter. The HAAAP family includes 99.77
PRK10249458 phenylalanine transporter; Provisional 99.6
PRK10655438 potE putrescine transporter; Provisional 99.6
TIGR00909429 2A0306 amino acid transporter. 99.58
PRK15049499 L-asparagine permease; Provisional 99.57
PRK10746461 putative transport protein YifK; Provisional 99.56
TIGR01773452 GABAperm gamma-aminobutyrate permease. GabP is hig 99.55
TIGR00912359 2A0309 spore germination protein (amino acid perme 99.54
PRK11387471 S-methylmethionine transporter; Provisional 99.53
PRK10644445 arginine:agmatin antiporter; Provisional 99.53
PRK10238456 aromatic amino acid transporter; Provisional 99.53
TIGR00905473 2A0302 transporter, basic amino acid/polyamine ant 99.52
PRK11049469 D-alanine/D-serine/glycine permease; Provisional 99.51
PRK10435435 cadB lysine/cadaverine antiporter; Provisional 99.51
PRK10836489 lysine transporter; Provisional 99.51
PRK10580457 proY putative proline-specific permease; Provision 99.49
TIGR03810468 arg_ornith_anti arginine/ornithine antiporter. Mem 99.47
COG1113462 AnsP Gamma-aminobutyrate permease and related perm 99.47
TIGR00913478 2A0310 amino acid permease (yeast). 99.46
PRK11021410 putative transporter; Provisional 99.45
TIGR00906557 2A0303 cationic amino acid transport permease. 99.44
TIGR00908442 2A0305 ethanolamine permease. The three genes used 99.44
TIGR00930 953 2a30 K-Cl cotransporter. 99.43
PRK10197446 gamma-aminobutyrate transporter; Provisional 99.4
TIGR00911501 2A0308 L-type amino acid transporter. 99.34
PF13520426 AA_permease_2: Amino acid permease; PDB: 3NCY_A 3G 99.32
PF03845320 Spore_permease: Spore germination protein; InterPr 99.28
COG0833541 LysP Amino acid transporters [Amino acid transport 99.24
KOG1287479 consensus Amino acid transporters [Amino acid tran 99.24
PRK11357445 frlA putative fructoselysine transporter; Provisio 99.23
PRK15238496 inner membrane transporter YjeM; Provisional 99.21
COG0531466 PotE Amino acid transporters [Amino acid transport 99.21
TIGR03428475 ureacarb_perm permease, urea carboxylase system. A 99.19
TIGR03813474 put_Glu_GABA_T putative glutamate/gamma-aminobutyr 99.11
TIGR00910507 2A0307_GadC glutamate:gamma-aminobutyrate antiport 99.06
KOG1286554 consensus Amino acid transporters [Amino acid tran 98.99
TIGR00907482 2A0304 amino acid permease (GABA permease). 98.98
PF00324478 AA_permease: Amino acid permease; InterPro: IPR004 98.84
TIGR00800442 ncs1 NCS1 nucleoside transporter family. The NCS1 98.82
PRK11375484 allantoin permease; Provisional 98.8
KOG3832319 consensus Predicted amino acid transporter [Genera 98.67
COG1457442 CodB Purine-cytosine permease and related proteins 98.61
KOG1289550 consensus Amino acid transporters [Amino acid tran 98.36
TIGR02358386 thia_cytX probable hydroxymethylpyrimidine transpo 98.29
PRK11017404 codB cytosine permease; Provisional 98.24
COG3949349 Uncharacterized membrane protein [Function unknown 98.15
TIGR00813407 sss transporter, SSS family. have different number 98.03
TIGR02119471 panF sodium/pantothenate symporter. Pantothenate ( 97.96
TIGR00796378 livcs branched-chain amino acid uptake carrier. tr 97.81
PF00474406 SSF: Sodium:solute symporter family; InterPro: IPR 97.79
PRK09442483 panF sodium/panthothenate symporter; Provisional 97.79
PRK12488549 acetate permease; Provisional 97.75
COG0591493 PutP Na+/proline symporter [Amino acid transport a 97.68
TIGR02711549 symport_actP cation/acetate symporter ActP. Member 97.66
PF02133440 Transp_cyt_pur: Permease for cytosine/purines, ura 97.52
PRK09395551 actP acetate permease; Provisional 97.49
PRK15419502 proline:sodium symporter PutP; Provisional 97.48
TIGR02121487 Na_Pro_sym sodium/proline symporter. This family c 97.41
TIGR00835425 agcS amino acid carrier protein. Members of the AG 97.15
TIGR03648 552 Na_symport_lg probable sodium:solute symporter, VC 97.1
PF02554376 CstA: Carbon starvation protein CstA; InterPro: IP 97.05
COG1953497 FUI1 Cytosine/uracil/thiamine/allantoin permeases 96.92
PF05525427 Branch_AA_trans: Branched-chain amino acid transpo 96.31
PRK15015 701 carbon starvation protein A; Provisional 96.17
PF01566358 Nramp: Natural resistance-associated macrophage pr 96.12
PRK10484523 putative transporter; Provisional 95.59
COG1914416 MntH Mn2+ and Fe2+ transporters of the NRAMP famil 95.2
COG1966 575 CstA Carbon starvation protein, predicted membrane 94.63
PF01235416 Na_Ala_symp: Sodium:alanine symporter family; Inte 93.77
COG4147529 DhlC Predicted symporter [General function predict 93.59
TIGR00796378 livcs branched-chain amino acid uptake carrier. tr 92.28
PRK00701439 manganese transport protein MntH; Reviewed 91.86
TIGR01197390 nramp NRAMP (natural resistance-associated macroph 90.0
COG4145473 PanF Na+/panthothenate symporter [Coenzyme metabol 89.6
PRK15433439 branched-chain amino acid transport system 2 carri 88.47
COG0733439 Na+-dependent transporters of the SNF family [Gene 88.26
KOG1288 945 consensus Amino acid transporters [Amino acid tran 87.0
PF05525427 Branch_AA_trans: Branched-chain amino acid transpo 86.26
KOG2083 643 consensus Na+/K+ symporter [Inorganic ion transpor 83.44
COG1114431 BrnQ Branched-chain amino acid permeases [Amino ac 80.06
>PLN03074 auxin influx permease; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.8e-72  Score=575.42  Aligned_cols=461  Identities=83%  Similarity=1.437  Sum_probs=408.7

Q ss_pred             ccchhhhhhchhhhccc------cccccccccccccccccCCchhHHHHHHHhhhhhhhhchhHHHHHhhchhHHHHHHH
Q 012371            4 EKVETVVAGNYIEMERE------EEDSKSSKSKLSSFFWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGLLSGILLQL   77 (465)
Q Consensus         4 ~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~s~~~a~~~l~~~~iG~GiL~lP~a~~~~G~~~g~i~l~   77 (465)
                      |+.|+....+..|+|+|      +....+.+.+++|..|+++|.+++.+|++++.+|.|+|+||+||+++||++|++.++
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~vG~GILaLP~Af~~~G~v~Gii~lv   84 (473)
T PLN03074          5 KQAETAIVGNYVEMEVEGGGEKEEGGGGGGKSRLKSLLWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGILFQI   84 (473)
T ss_pred             cccchhHhhccchhccccccccccCCCCCCceeeeecccCCchHHHHHHHHHHHHHhHHHHhHHHHHHHccHHHHHHHHH
Confidence            33555555555555433      233345678889999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhcccccccccccHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHhHhhhhhh
Q 012371           78 FYGLMGSWTAYLISILYVEYRTRKEREKVDFRNHVIQWFEVLDGLLGKHWRNIGLFFNCTFLLFGSVIQLIACASNIYYI  157 (465)
Q Consensus        78 ~~~~~~~~s~~ll~~~~~~~~~~~~~~~~~~~~~~~~y~~l~~~~~G~~~~~~~~~~~~~~~~g~~~~y~i~~~~~l~~~  157 (465)
                      +.++++.||.+++.+++.++++|+++++.++++++.+|.|+++..+||+++.+..+...+++++.|+.|++..+++++++
T Consensus        85 ~~~~l~~Yt~~lL~~~~~~~~~r~~~~~~~~~~~~~~~~e~~~~~~G~~~~~~~~~~~~v~l~~~~v~~li~~~~~~~~l  164 (473)
T PLN03074         85 FYGLLGSWTAYLISVLYVEYRARKEREKVDFKNHVIQWFEVLDGLLGPYWKNVGLAFNCTFLLFGSVIQLIACASNIYYI  164 (473)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccCcCCCchhHHHHHHHHHHHHhcChhHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhh
Confidence            99999999999999999898888877777778777899999999999999999999999999999999999999999998


Q ss_pred             hccCCchhhhHhHHHHHhhhhccCCCcchhHHHHHHHHHHHHHHHHHHHhhhhcccCCCccCCCCchhhHhHhHHHHHHH
Q 012371          158 NDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLIMTSFTAWYLTIASLVHGQVEGVKHSGPTKMVLYFTGATNILY  237 (465)
Q Consensus       158 ~~~~~~~~~~ii~~~v~~pl~~l~~l~~l~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~f  237 (465)
                      +..++.+.|+++++++.+|++++|++++++++|.+|+.++++.++++++..+.+++.++.+++.+.++..++.++++++|
T Consensus       165 ~~~~~~~~~~~i~~~v~~~~~~i~sl~~l~~~S~ig~~~tl~~av~i~i~~i~~~~~~~~~~~~~~~~~~~f~~~~~i~f  244 (473)
T PLN03074        165 NDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLLMTTYTAWYMTIAALSHGQVEGVKHSGPTKLVLYFTGATNILY  244 (473)
T ss_pred             CCCcCCCeEEeehHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCchhHHHHHHHHHHHHH
Confidence            88889999999999999999999999999999999998877766666666666666555554445677888999999999


Q ss_pred             HhcCccchHhHhhhccCCccchHHHHHHHHHHHHHHHhHHHHHHHhhccccccccccccccCcccHHHHHHHHHHHHHHH
Q 012371          238 TFGGHAVTVEIMHAMWKPQKFKSIYLLATLYVLTLTLPSASAVYWAFGDMLLTHSNAFSLLPRTGFRDTAVILMLIHQFI  317 (465)
Q Consensus       238 af~~~~~v~~i~~~mk~p~~~~~~~~~s~~~~~~~y~~~g~~gy~~fG~~~~~~~~il~~l~~~~~~~~~~~~~~i~~~~  317 (465)
                      ||+||+++|++++|||+|+||+++...+..+++++|+.+|+.||+.|||++.++++++.|+|++.+..+++++++++++.
T Consensus       245 af~g~~v~~~I~~~M~~P~~F~~~~~l~~~~v~~~y~~~~~~gY~~fG~~~~~~s~~l~~lp~~~~~~~~~~~~~i~~~~  324 (473)
T PLN03074        245 TFGGHAVTVEIMHAMWKPQKFKYIYLAATLYVLTLTLPSAAAVYWAFGDELLTHSNAFSLLPRSGWRDAAVILMLIHQFI  324 (473)
T ss_pred             HhcccccHHHHHHhccChhcccchHHHHHHHHHHHHHHHHHeeeeeechhhhhchhHHhcCCCchHHHHHHHHHHHHHHH
Confidence            99999999999999999999999988999999999999999999999999754467888898777789999999999999


Q ss_pred             HHHhhhccHHHHHHHHhcCCCCcchhhHHHhhhhHHHHHHHHHHhcCCchhhHHhhhhhhhhhhHHhhhhHHHHHHhcch
Q 012371          318 TFGFACTPLYFVWEKFIGVHNTKSTFKRALARLPVVIPIWFLAIIFPFFGPINSTVGSLLVSFTVYIIPALAHMITFAPA  397 (465)
Q Consensus       318 s~pl~~~p~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~A~~vp~~~~i~~lvGs~~~~~l~~ilP~l~~l~~~~~~  397 (465)
                      +||+++.|+.+.+|+..+.+++++...|+..|+.+++.++++|+.+|+|+++++++||++++.+++++|+++|++.++++
T Consensus       325 sy~l~~~p~~~~~e~~~~~~~~k~~~~r~~~R~~lv~~~~~iA~~IP~fg~llsLvGs~~~s~l~~i~P~l~~l~~~~~~  404 (473)
T PLN03074        325 TFGFACTPLYFVWEKAIGVHDTKSICLRALARLPVVVPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPSLAHMLTYRSA  404 (473)
T ss_pred             HHHHHHhhHHHHHHHHhcccccccHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcch
Confidence            99999999999999988655556678899999999999999999999999999999999999999999999999998888


Q ss_pred             hhhhccccCCCcccCcchhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccccccccCCCCC
Q 012371          398 AARENAVERPPKCLGGWAGLYSLNIFVVVWVLVVGFGFGGWASMLNFIQQVDKFGLFTKCYQCPPHK  464 (465)
Q Consensus       398 ~~~~~~~~~~~~~~~~w~~~~~~~~~iii~~g~~~~v~gt~~si~~ii~~~~~~~~~~~~~~c~~~~  464 (465)
                      .+|++..|||++...+|.+..++|+++++++++++++.|+|+|+++|++++++|+.|++||+|+|+.
T Consensus       405 ~~~~~~~~~~~~~~~~~~~~~~~n~~iiv~~~~~g~~~G~~asi~~ii~~~~~~~~f~~~~~c~~~~  471 (473)
T PLN03074        405 SARQNAAEKPPFFLPSWTGMYVVNAFVVVWVLVVGFGFGGWASMTNFVRQIDTFGLFAKCYQCPPPS  471 (473)
T ss_pred             hhhhhcccCCcccCCccceehhhhhHHHHhhhhHhhccchHHHHHHHHHhhhhhhhhhhhccCCCCC
Confidence            7777777788765566666788999999877899888999999999999999999999999999985

>KOG1304 consensus Amino acid transporters [Amino acid transport and metabolism] Back     alignment and domain information
>KOG1303 consensus Amino acid transporters [Amino acid transport and metabolism] Back     alignment and domain information
>PTZ00206 amino acid transporter; Provisional Back     alignment and domain information
>PF01490 Aa_trans: Transmembrane amino acid transporter protein; InterPro: IPR013057 This transmembrane region is found in many amino acid transporters including P34579 from SWISSPROT (UNC-47) and P40501 from SWISSPROT (MTR) Back     alignment and domain information
>KOG1305 consensus Amino acid transporter protein [Amino acid transport and metabolism] Back     alignment and domain information
>KOG4303 consensus Vesicular inhibitory amino acid transporter [Amino acid transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>COG0814 SdaC Amino acid permeases [Amino acid transport and metabolism] Back     alignment and domain information
>PRK10483 tryptophan permease; Provisional Back     alignment and domain information
>PRK09664 tryptophan permease TnaB; Provisional Back     alignment and domain information
>PF03222 Trp_Tyr_perm: Tryptophan/tyrosine permease family; InterPro: IPR018227 Amino acid permeases are integral membrane proteins involved in the transport of amino acids into the cell Back     alignment and domain information
>TIGR00837 araaP aromatic amino acid transport protein Back     alignment and domain information
>PRK15132 tyrosine transporter TyrP; Provisional Back     alignment and domain information
>PRK13629 threonine/serine transporter TdcC; Provisional Back     alignment and domain information
>TIGR00814 stp serine transporter Back     alignment and domain information
>PRK10249 phenylalanine transporter; Provisional Back     alignment and domain information
>PRK10655 potE putrescine transporter; Provisional Back     alignment and domain information
>TIGR00909 2A0306 amino acid transporter Back     alignment and domain information
>PRK15049 L-asparagine permease; Provisional Back     alignment and domain information
>PRK10746 putative transport protein YifK; Provisional Back     alignment and domain information
>TIGR01773 GABAperm gamma-aminobutyrate permease Back     alignment and domain information
>TIGR00912 2A0309 spore germination protein (amino acid permease) Back     alignment and domain information
>PRK11387 S-methylmethionine transporter; Provisional Back     alignment and domain information
>PRK10644 arginine:agmatin antiporter; Provisional Back     alignment and domain information
>PRK10238 aromatic amino acid transporter; Provisional Back     alignment and domain information
>TIGR00905 2A0302 transporter, basic amino acid/polyamine antiporter (APA) family Back     alignment and domain information
>PRK11049 D-alanine/D-serine/glycine permease; Provisional Back     alignment and domain information
>PRK10435 cadB lysine/cadaverine antiporter; Provisional Back     alignment and domain information
>PRK10836 lysine transporter; Provisional Back     alignment and domain information
>PRK10580 proY putative proline-specific permease; Provisional Back     alignment and domain information
>TIGR03810 arg_ornith_anti arginine/ornithine antiporter Back     alignment and domain information
>COG1113 AnsP Gamma-aminobutyrate permease and related permeases [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR00913 2A0310 amino acid permease (yeast) Back     alignment and domain information
>PRK11021 putative transporter; Provisional Back     alignment and domain information
>TIGR00906 2A0303 cationic amino acid transport permease Back     alignment and domain information
>TIGR00908 2A0305 ethanolamine permease Back     alignment and domain information
>TIGR00930 2a30 K-Cl cotransporter Back     alignment and domain information
>PRK10197 gamma-aminobutyrate transporter; Provisional Back     alignment and domain information
>TIGR00911 2A0308 L-type amino acid transporter Back     alignment and domain information
>PF13520 AA_permease_2: Amino acid permease; PDB: 3NCY_A 3GI8_C 3GIA_A 3GI9_C 3OB6_A 3L1L_A 3LRC_D 3LRB_B 4DJK_A 4DJI_A Back     alignment and domain information
>PF03845 Spore_permease: Spore germination protein; InterPro: IPR004761 Amino acid permeases are integral membrane proteins involved in the transport of amino acids into the cell Back     alignment and domain information
>COG0833 LysP Amino acid transporters [Amino acid transport and metabolism] Back     alignment and domain information
>KOG1287 consensus Amino acid transporters [Amino acid transport and metabolism] Back     alignment and domain information
>PRK11357 frlA putative fructoselysine transporter; Provisional Back     alignment and domain information
>PRK15238 inner membrane transporter YjeM; Provisional Back     alignment and domain information
>COG0531 PotE Amino acid transporters [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR03428 ureacarb_perm permease, urea carboxylase system Back     alignment and domain information
>TIGR03813 put_Glu_GABA_T putative glutamate/gamma-aminobutyrate antiporter Back     alignment and domain information
>TIGR00910 2A0307_GadC glutamate:gamma-aminobutyrate antiporter Back     alignment and domain information
>KOG1286 consensus Amino acid transporters [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR00907 2A0304 amino acid permease (GABA permease) Back     alignment and domain information
>PF00324 AA_permease: Amino acid permease; InterPro: IPR004841 Amino acid permeases are integral membrane proteins involved in the transport of amino acids into the cell Back     alignment and domain information
>TIGR00800 ncs1 NCS1 nucleoside transporter family Back     alignment and domain information
>PRK11375 allantoin permease; Provisional Back     alignment and domain information
>KOG3832 consensus Predicted amino acid transporter [General function prediction only] Back     alignment and domain information
>COG1457 CodB Purine-cytosine permease and related proteins [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG1289 consensus Amino acid transporters [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR02358 thia_cytX probable hydroxymethylpyrimidine transporter CytX Back     alignment and domain information
>PRK11017 codB cytosine permease; Provisional Back     alignment and domain information
>COG3949 Uncharacterized membrane protein [Function unknown] Back     alignment and domain information
>TIGR00813 sss transporter, SSS family Back     alignment and domain information
>TIGR02119 panF sodium/pantothenate symporter Back     alignment and domain information
>TIGR00796 livcs branched-chain amino acid uptake carrier Back     alignment and domain information
>PF00474 SSF: Sodium:solute symporter family; InterPro: IPR001734 Sodium/substrate symport (or co-transport) is a widespread mechanism of solute transport across cytoplasmic membranes of pro- and eukaryotic cells Back     alignment and domain information
>PRK09442 panF sodium/panthothenate symporter; Provisional Back     alignment and domain information
>PRK12488 acetate permease; Provisional Back     alignment and domain information
>COG0591 PutP Na+/proline symporter [Amino acid transport and metabolism / General function prediction only] Back     alignment and domain information
>TIGR02711 symport_actP cation/acetate symporter ActP Back     alignment and domain information
>PF02133 Transp_cyt_pur: Permease for cytosine/purines, uracil, thiamine, allantoin; InterPro: IPR001248 The Nucleobase Cation Symporter-1 (NCS1) family consists of bacterial and yeast transporters for nucleobases including purines and pyrimidines Back     alignment and domain information
>PRK09395 actP acetate permease; Provisional Back     alignment and domain information
>PRK15419 proline:sodium symporter PutP; Provisional Back     alignment and domain information
>TIGR02121 Na_Pro_sym sodium/proline symporter Back     alignment and domain information
>TIGR00835 agcS amino acid carrier protein Back     alignment and domain information
>TIGR03648 Na_symport_lg probable sodium:solute symporter, VC_2705 subfamily Back     alignment and domain information
>PF02554 CstA: Carbon starvation protein CstA; InterPro: IPR003706 Escherichia coli induces the synthesis of at least 30 proteins at the onset of carbon starvation, two-thirds of which are positively regulated by the cyclic AMP (cAMP) and cAMP receptor protein (CRP) complex Back     alignment and domain information
>COG1953 FUI1 Cytosine/uracil/thiamine/allantoin permeases [Nucleotide transport and metabolism / Coenzyme metabolism] Back     alignment and domain information
>PF05525 Branch_AA_trans: Branched-chain amino acid transport protein; InterPro: IPR004685 Characterised members of the branched chain Amino Acid:Cation Symporter (LIVCS) family transport all three of the branched chain aliphatic amino acids (leucine (L), isoleucine (I) and valine (V)) Back     alignment and domain information
>PRK15015 carbon starvation protein A; Provisional Back     alignment and domain information
>PF01566 Nramp: Natural resistance-associated macrophage protein; InterPro: IPR001046 The natural resistance-associated macrophage protein (NRAMP) family consists of Nramp1, Nramp2, and yeast proteins Smf1 and Smf2 Back     alignment and domain information
>PRK10484 putative transporter; Provisional Back     alignment and domain information
>COG1914 MntH Mn2+ and Fe2+ transporters of the NRAMP family [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG1966 CstA Carbon starvation protein, predicted membrane protein [Signal transduction mechanisms] Back     alignment and domain information
>PF01235 Na_Ala_symp: Sodium:alanine symporter family; InterPro: IPR001463 Sodium symporters can be divided by sequence and functional similarity into various groups Back     alignment and domain information
>COG4147 DhlC Predicted symporter [General function prediction only] Back     alignment and domain information
>TIGR00796 livcs branched-chain amino acid uptake carrier Back     alignment and domain information
>PRK00701 manganese transport protein MntH; Reviewed Back     alignment and domain information
>TIGR01197 nramp NRAMP (natural resistance-associated macrophage protein) metal ion transporters Back     alignment and domain information
>COG4145 PanF Na+/panthothenate symporter [Coenzyme metabolism] Back     alignment and domain information
>PRK15433 branched-chain amino acid transport system 2 carrier protein BrnQ; Provisional Back     alignment and domain information
>COG0733 Na+-dependent transporters of the SNF family [General function prediction only] Back     alignment and domain information
>KOG1288 consensus Amino acid transporters [Amino acid transport and metabolism] Back     alignment and domain information
>PF05525 Branch_AA_trans: Branched-chain amino acid transport protein; InterPro: IPR004685 Characterised members of the branched chain Amino Acid:Cation Symporter (LIVCS) family transport all three of the branched chain aliphatic amino acids (leucine (L), isoleucine (I) and valine (V)) Back     alignment and domain information
>KOG2083 consensus Na+/K+ symporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG1114 BrnQ Branched-chain amino acid permeases [Amino acid transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query465
3l1l_A445 Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC 99.69
3gia_A444 Uncharacterized protein MJ0609; membrane protein, 99.49
4djk_A511 Probable glutamate/gamma-aminobutyrate antiporter; 99.43
2jln_A501 MHP1; hydantoin, transporter, membrane protein, nu 98.98
3dh4_A530 Sodium/glucose cotransporter; membrane protein, sy 97.76
2xq2_A 593 Sodium/glucose cotransporter; transport protein, i 97.55
>3l1l_A Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC, Arg-bound, amino-acid transport, cell inner membrane, cell membrane, membrane; HET: ARG BNG; 3.00A {Escherichia coli} PDB: 3h5m_A* 3h6b_A 3lrb_A 3lrc_A 3ob6_A* 3hqk_A 3ncy_A Back     alignment and structure
Probab=99.69  E-value=5.3e-14  Score=143.49  Aligned_cols=348  Identities=11%  Similarity=-0.008  Sum_probs=194.9

Q ss_pred             ccCCchhHHHHHHHhhhhhhhhchhHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccccccH
Q 012371           36 WHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGLLSGILLQLFYGLMGSWTAYLISILYVEYRTRKEREKVDFRNHVIQW  115 (465)
Q Consensus        36 ~~~~s~~~a~~~l~~~~iG~GiL~lP~a~~~~G~~~g~i~l~~~~~~~~~s~~ll~~~~~~~~~~~~~~~~~~~~~~~~y  115 (465)
                      +++.+.++..+..+++++|+|++.+|...++.|.. +++..++.++........+    .|..++.|+.|        ++
T Consensus         7 ~r~l~~~~~~~l~ig~~iG~Gif~~~~~~~~~G~~-~~~~~li~~~~~~~~a~~~----~el~~~~p~~G--------g~   73 (445)
T 3l1l_A            7 AHKVGLIPVTLMVSGAIMGSGVFLLPANLASTGGI-AIYGWLVTIIGALGLSMVY----AKMSFLDPSPG--------GS   73 (445)
T ss_dssp             CCCBCHHHHHHHHHHHHCSSHHHHHHHHHHHHCTH-HHHHHHHHHHHHHHHHHHH----HHHHHHCCCTT--------TH
T ss_pred             CCcccHHHHHHHHHHhHHhhhHHhhHHHHHHhhhH-HHHHHHHHHHHHHHHHHHH----HHHHccCCCCC--------Cc
Confidence            35678899999999999999999999998888864 6777777777776665554    45566665433        66


Q ss_pred             HHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHhHhhhhhhhccCCchhhhHhHHH-HHhh--hhccCCCcchhHHHHH
Q 012371          116 FEVLDGLLGKHWRNIGLFFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGA-CCAT--TVFIPSFHNYRIWSFL  192 (465)
Q Consensus       116 ~~l~~~~~G~~~~~~~~~~~~~~~~g~~~~y~i~~~~~l~~~~~~~~~~~~~ii~~~-v~~p--l~~l~~l~~l~~~s~~  192 (465)
                      .+..++.+||..+++..+..++........+....++.+..+.+.........+..+ +.+.  ....+..+....++.+
T Consensus        74 y~~~~~~~G~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~g~~~~~~~~~~  153 (445)
T 3l1l_A           74 YAYARRCFGPFLGYQTNVLYWLACWIGNIAMVVIGVGYLSYFFPILKDPWVLTITCVVVLWIFVLLNIVGPKMITRVQAV  153 (445)
T ss_dssp             HHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCGGGGSHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred             hhhHHhHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccccccHHHHHHHHHHHHHHHHHHHhchHHHHHHHHH
Confidence            778899999999999988887776666667776667766655443332222212221 1111  1222334444444333


Q ss_pred             HHHHHHHHHHHHHHhhhhcccCCCc----cCCCCchhhHhHhHHHHHHHHhcCccchHhHhhhccCCc-cchHHHHHHHH
Q 012371          193 GLIMTSFTAWYLTIASLVHGQVEGV----KHSGPTKMVLYFTGATNILYTFGGHAVTVEIMHAMWKPQ-KFKSIYLLATL  267 (465)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~g~~~~~----~~~~~~~~~~~~~a~~~~~faf~~~~~v~~i~~~mk~p~-~~~~~~~~s~~  267 (465)
                      .....+...+.+++..+.+.+++..    ++..+.++..++.++....|+|.|........+|+|||+ +.+|+...+..
T Consensus       154 ~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~af~G~e~~~~~~~e~k~p~r~ip~a~~~~~~  233 (445)
T 3l1l_A          154 ATVLALIPIVGIAVFGWFWFRGETYMAAWNVSGLGTFGAIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVL  233 (445)
T ss_dssp             HHHHHHHHHHHHHHTTSTTCCCCCCCCC-----------HHHHHHHHHHTTTTTTHHHHGGGGBSSHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhChhhcccccCccCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCccccccHHHHHHHH
Confidence            3322222211222222222221111    111222356788889999999999999999999999995 57999999999


Q ss_pred             HHHHHHHhHHHHHHHhhccccccc--ccccc---ccCcccHHHHHHHHHHHHHHHHHHhhhccHHHHHHHH---------
Q 012371          268 YVLTLTLPSASAVYWAFGDMLLTH--SNAFS---LLPRTGFRDTAVILMLIHQFITFGFACTPLYFVWEKF---------  333 (465)
Q Consensus       268 ~~~~~y~~~g~~gy~~fG~~~~~~--~~il~---~l~~~~~~~~~~~~~~i~~~~s~pl~~~p~~~~~~~~---------  333 (465)
                      .+.++|+...+......+.+...+  .+...   ....++...+..+...++.+.+.--......+.+..+         
T Consensus       234 ~~~~~y~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~sR~~~~~a~dg~lP~~  313 (445)
T 3l1l_A          234 IAAVCYVLSTTAIMGMIPNAALRVSASPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPI  313 (445)
T ss_dssp             HHHHHHHHHHHHHHHHSCTTTSCSTTCTHHHHHHHHHCTTHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHTTSSCGG
T ss_pred             HHHHHHHHHHHHHHhcCCHHHHhccCcHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcHH
Confidence            999999888777666665432101  11111   1111333344455555554444433332222222221         


Q ss_pred             hcCCCCcchhhHHHhhhhHHHHHHHHHHhcC----CchhhHHhhhhhhhhhhHHhhhhHHHHHHhcchh
Q 012371          334 IGVHNTKSTFKRALARLPVVIPIWFLAIIFP----FFGPINSTVGSLLVSFTVYIIPALAHMITFAPAA  398 (465)
Q Consensus       334 ~~~~~~~~~~~~~~~r~~~~~~~~~~A~~vp----~~~~i~~lvGs~~~~~l~~ilP~l~~l~~~~~~~  398 (465)
                      +++.++++.+.+-+.-...+.....+....|    .++.+.++.+  .+..+.|.++.+.+++.+|+++
T Consensus       314 ~~~~~~~~~P~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~y~~~~~~~~~~r~~~~  380 (445)
T 3l1l_A          314 FARVNKAGTPVAGLIIVGILMTIFQLSSISPNATKEFGLVSSVSV--IFTLVPYLYTCAALLLLGHGHF  380 (445)
T ss_dssp             GGCCCTTCCCHHHHHHHHHHHHHHHHSTTSHHHHCCCHHHHHHHH--HHHHHHHHHHHHHHHHHHSSSS
T ss_pred             HHhcCCCCCCHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhhcCc
Confidence            1111122222222221121111111111122    3455555543  3567889999999999887654
>3gia_A Uncharacterized protein MJ0609; membrane protein, transporter, cell membrane, membrane, transmembrane, transport protein; HET: D10 BCN; 2.32A {Methanocaldococcus jannaschii} PDB: 3gi9_C* 3gi8_C Back     alignment and structure
>4djk_A Probable glutamate/gamma-aminobutyrate antiporter; LEUT, glutamate-GABA antiporter, transport protein; 3.10A {Escherichia coli} PDB: 4dji_A Back     alignment and structure
>2jln_A MHP1; hydantoin, transporter, membrane protein, nucleobase-cation-symport-1 family; 2.85A {Microbacterium liquefaciens} PDB: 2jlo_A* 2x79_A Back     alignment and structure
>3dh4_A Sodium/glucose cotransporter; membrane protein, symporter, sugar transport, SGLT, ION TRAN membrane, sodium transport, symport; HET: GAL; 2.70A {Vibrio parahaemolyticus} Back     alignment and structure
>2xq2_A Sodium/glucose cotransporter; transport protein, inverted repeats, LEUT-fold, galactose; 2.73A {Vibrio parahaemolyticus} PDB: 2xq2_B 2kpe_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00