Citrus Sinensis ID: 012412
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 464 | 2.2.26 [Sep-21-2011] | |||||||
| O22822 | 449 | UDP-glycosyltransferase 7 | no | no | 0.935 | 0.966 | 0.498 | 1e-125 | |
| O22820 | 449 | UDP-glycosyltransferase 7 | yes | no | 0.931 | 0.962 | 0.490 | 1e-124 | |
| Q9SYK9 | 453 | UDP-glycosyltransferase 7 | no | no | 0.939 | 0.962 | 0.490 | 1e-121 | |
| P0C7P7 | 453 | UDP-glycosyltransferase 7 | no | no | 0.939 | 0.962 | 0.479 | 1e-119 | |
| Q6X1C0 | 460 | Crocetin glucosyltransfer | N/A | no | 0.937 | 0.945 | 0.439 | 1e-110 | |
| Q9SKC1 | 457 | UDP-glycosyltransferase 7 | no | no | 0.954 | 0.969 | 0.431 | 1e-110 | |
| Q9SKC5 | 456 | UDP-glycosyltransferase 7 | no | no | 0.939 | 0.956 | 0.432 | 1e-108 | |
| Q41819 | 471 | Indole-3-acetate beta-glu | N/A | no | 0.931 | 0.917 | 0.433 | 1e-102 | |
| O48676 | 460 | UDP-glycosyltransferase 7 | no | no | 0.941 | 0.95 | 0.423 | 1e-101 | |
| Q5XF20 | 490 | UDP-glycosyltransferase 8 | no | no | 0.937 | 0.887 | 0.355 | 9e-82 |
| >sp|O22822|U74F2_ARATH UDP-glycosyltransferase 74F2 OS=Arabidopsis thaliana GN=UGT74F2 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 448 bits (1153), Expect = e-125, Method: Compositional matrix adjust.
Identities = 227/455 (49%), Positives = 308/455 (67%), Gaps = 21/455 (4%)
Query: 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAIS 71
K H L + YP QGHI P QF +RL KG+K TL T F + S++ D S I + IS
Sbjct: 4 KRGHVLAVPYPTQGHITPFRQFCKRLHFKGLKTTLALTTFVFNSINPDLSGP-ISIATIS 62
Query: 72 DGYDEGGYAQAESIEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAK 131
DGYD GG+ A+SI+ YL+ F G +T+ ++++K SD+P+ CIVYD+ L WALDVA+
Sbjct: 63 DGYDHGGFETADSIDDYLKDFKTSGSKTIADIIQKHQTSDNPITCIVYDAFLPWALDVAR 122
Query: 132 KFGLLGAPFLTQSCAVDYIYY--HVKKGSLELPLTGNEILLPGMPPLEPQDMPSFIHDLG 189
+FGL+ PF TQ CAV+Y+YY ++ GSL+LP+ +P LE QD+PSF G
Sbjct: 123 EFGLVATPFFTQPCAVNYVYYLSYINNGSLQLPIEE-------LPFLELQDLPSFFSVSG 175
Query: 190 SYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTWSLRTIGPTIPSFYLDKQ 249
SYPA M+++ QF N +KAD+VL N+F ELE E K + TIGPTIPS YLD++
Sbjct: 176 SYPAYFEMVLQ-QFINFEKADFVLVNSFQELELHENELWSKACPVLTIGPTIPSIYLDQR 234
Query: 250 IEDDKDYGFSMFKSSTEA-CMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQ 308
I+ D Y ++F+S ++ C+ WL+ R + SVVYV++GS +L +MEELA + S+
Sbjct: 235 IKSDTGYDLNLFESKDDSFCINWLDTRPQGSVVYVAFGSMAQLTNVQMEELASAV--SNF 292
Query: 309 HFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEA 368
FLWVVR SE+ KLP F ET+ KSLV+ W PQL+VL+++A GCF+THCGWNSTMEA
Sbjct: 293 SFLWVVRSSEEEKLPSGFL-ETVNKEKSLVLKWSPQLQVLSNKAIGCFLTHCGWNSTMEA 351
Query: 369 LSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP------IVKRDAIADCISEILEGERG 422
L+ GVPMVAMPQW+DQ NAKYI DVWK G++ I KR+ I I E++EGER
Sbjct: 352 LTFGVPMVAMPQWTDQPMNAKYIQDVWKAGVRVKTEKESGIAKREEIEFSIKEVMEGERS 411
Query: 423 KELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASL 457
KE+++N KWR LA +++ +GGS+D+NID FV+ +
Sbjct: 412 KEMKKNVKKWRDLAVKSLNEGGSTDTNIDTFVSRV 446
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Glycosyltransferase that glucosylates benzoic acid and derivatives. Substrate preference is benzoic acid > salicylic acid (SA) > 3-hydroxybenzoic acid > 4-hydroxybenzoic acid. Catalyzes the formation of both SA 2-O-beta-D-glucoside (SAG) and SA glucose ester (SGE). Has high affinity for the tryptophan precursor anthranilate. Catalyzes the formation of anthranilate glucose ester. Is the major source of this activity in the plant. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: - |
| >sp|O22820|U74F1_ARATH UDP-glycosyltransferase 74F1 OS=Arabidopsis thaliana GN=UGT74F1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 446 bits (1148), Expect = e-124, Method: Compositional matrix adjust.
Identities = 222/453 (49%), Positives = 307/453 (67%), Gaps = 21/453 (4%)
Query: 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDG 73
H L + +P QGHI P+ QF +RL KG K T T F + ++H D SS I + ISDG
Sbjct: 6 GHVLAVPFPSQGHITPIRQFCKRLHSKGFKTTHTLTTFIFNTIHLDPSSP-ISIATISDG 64
Query: 74 YDEGGYAQAESIEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKF 133
YD+GG++ A S+ YL+ F G +T+ +++ K +D+P+ CIVYDS + WALD+A F
Sbjct: 65 YDQGGFSSAGSVPEYLQNFKTFGSKTVADIIRKHQSTDNPITCIVYDSFMPWALDLAMDF 124
Query: 134 GLLGAPFLTQSCAVDYIYY--HVKKGSLELPLTGNEILLPGMPPLEPQDMPSFIHDLGSY 191
GL APF TQSCAV+YI Y ++ GSL LP+ +P LE QD+P+F+ GS+
Sbjct: 125 GLAAAPFFTQSCAVNYINYLSYINNGSLTLPIKD-------LPLLELQDLPTFVTPTGSH 177
Query: 192 PAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTWSLRTIGPTIPSFYLDKQIE 251
A M+++ QF N DKAD+VL N+F++L+ E L K + TIGPT+PS YLD+QI+
Sbjct: 178 LAYFEMVLQ-QFTNFDKADFVLVNSFHDLDLHEEELLSKVCPVLTIGPTVPSMYLDQQIK 236
Query: 252 DDKDYGFSMFKSSTEA-CMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHF 310
D DY ++F A C WL+ R + SVVY+++GS +L +E+MEE+A + S+ +
Sbjct: 237 SDNDYDLNLFDLKEAALCTDWLDKRPEGSVVYIAFGSMAKLSSEQMEEIASAI--SNFSY 294
Query: 311 LWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALS 370
LWVVR SE++KLP F ET+ KSLV+ W PQL+VL+++A GCF+THCGWNSTME LS
Sbjct: 295 LWVVRASEESKLPPGFL-ETVDKDKSLVLKWSPQLQVLSNKAIGCFMTHCGWNSTMEGLS 353
Query: 371 LGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP------IVKRDAIADCISEILEGERGKE 424
LGVPMVAMPQW+DQ NAKYI DVWK G++ I KR+ I I E++EGE+ KE
Sbjct: 354 LGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKAEKESGICKREEIEFSIKEVMEGEKSKE 413
Query: 425 LRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASL 457
++ NAGKWR LA +++++GGS+D NI+EFV+ +
Sbjct: 414 MKENAGKWRDLAVKSLSEGGSTDININEFVSKI 446
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Possesses quercetin 7-O-glucosyltransferase and 4'-O-glucosyltransferase activities in vitro. Also active in vitro on benzoates and benzoate derivatives. Has low affinity for the tryptophan precursor anthranilate. Catalyzes the formation of anthranilate glucose ester. Is a minor source of this activity in the plant. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
| >sp|Q9SYK9|U74E2_ARATH UDP-glycosyltransferase 74E2 OS=Arabidopsis thaliana GN=UGT74E2 PE=1 SV=1 | Back alignment and function description |
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Score = 436 bits (1121), Expect = e-121, Method: Compositional matrix adjust.
Identities = 225/459 (49%), Positives = 307/459 (66%), Gaps = 23/459 (5%)
Query: 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFF----YKSLHRDSSSSSIPLEA 69
+H +VL +PGQGHI P+ QF +RL KG+K+TLV YK+ H SI +
Sbjct: 5 SHLIVLPFPGQGHITPMSQFCKRLASKGLKLTLVLVSDKPSPPYKTEH-----DSITVFP 59
Query: 70 ISDGYDEGGYAQAESIEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDV 129
IS+G+ EG + ++ Y+ER TL +LVE M S +P IVYDS + W LDV
Sbjct: 60 ISNGFQEG-EEPLQDLDDYMERVETSIKNTLPKLVEDMKLSGNPPRAIVYDSTMPWLLDV 118
Query: 130 AKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLT--GNEIL--LPGMPPLEPQDMPSFI 185
A +GL GA F TQ V IYYHV KGS +P T G+ L P P L D+PSF+
Sbjct: 119 AHSYGLSGAVFFTQPWLVTAIYYHVFKGSFSVPSTKYGHSTLASFPSFPMLTANDLPSFL 178
Query: 186 HDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTWSLRTIGPTIPSFY 245
+ SYP + +++ Q NID+ D VLCNTF +LEE++++W++ W + IGPT+PS Y
Sbjct: 179 CESSSYPNILRIVVD-QLSNIDRVDIVLCNTFDKLEEKLLKWVQSLWPVLNIGPTVPSMY 237
Query: 246 LDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKS 305
LDK++ +DK+YGFS+F + CM+WLN + SVVY+S+GS V LK ++M ELA GLK
Sbjct: 238 LDKRLSEDKNYGFSLFNAKVAECMEWLNSKEPNSVVYLSFGSLVILKEDQMLELAAGLKQ 297
Query: 306 SDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNST 365
S + FLWVVRE+E KLP+ + +E K L+VSW PQL+VLAH++ GCF+THCGWNST
Sbjct: 298 SGRFFLWVVRETETHKLPRNYVEE--IGEKGLIVSWSPQLDVLAHKSIGCFLTHCGWNST 355
Query: 366 MEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP-----IVKRDAIADCISEILEGE 420
+E LSLGVPM+ MP W+DQ TNAK++ DVWK G++ V+R+ I + E++EGE
Sbjct: 356 LEGLSLGVPMIGMPHWTDQPTNAKFMQDVWKVGVRVKAEGDGFVRREEIMRSVEEVMEGE 415
Query: 421 RGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLAC 459
+GKE+R+NA KW+ LA+EAV++GGSSD +I+EFV S+ C
Sbjct: 416 KGKEIRKNAEKWKVLAQEAVSEGGSSDKSINEFV-SMFC 453
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Glucosyltransferase that acts on the auxin indole-3-butyric acid (IBA). Mediates abiotic stress responses and stress-induced morphological adaptations by regulating auxin homeostasis. Possesses low activity in vitro on jasmonate (JA) and the synthetic auxin analog naphthaleneacetic acid (NAA). Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
| >sp|P0C7P7|U74E1_ARATH UDP-glycosyltransferase 74E1 OS=Arabidopsis thaliana GN=UGT74E1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 430 bits (1105), Expect = e-119, Method: Compositional matrix adjust.
Identities = 220/459 (47%), Positives = 302/459 (65%), Gaps = 23/459 (5%)
Query: 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFF----YKSLHRDSSSSSIPLEA 69
+H +VL +P QGHI P+ QF +RL K +K+TLV YK+ H +I +
Sbjct: 5 SHVIVLPFPAQGHITPMSQFCKRLASKSLKITLVLVSDKPSPPYKTEH-----DTITVVP 59
Query: 70 ISDGYDEGGYAQAESIEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDV 129
IS+G+ EG ++E ++ Y+ER L +L+E M S +P +VYDS + W LDV
Sbjct: 60 ISNGFQEG-QERSEDLDEYMERVESSIKNRLPKLIEDMKLSGNPPRALVYDSTMPWLLDV 118
Query: 130 AKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLT--GNEIL--LPGMPPLEPQDMPSFI 185
A +GL GA F TQ V IYYHV KGS +P T G+ L P +P L D+PSF+
Sbjct: 119 AHSYGLSGAVFFTQPWLVSAIYYHVFKGSFSVPSTKYGHSTLASFPSLPILNANDLPSFL 178
Query: 186 HDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTWSLRTIGPTIPSFY 245
+ SYP + ++ Q NID+ D VLCNTF +LEE++++W++ W + IGPT+PS Y
Sbjct: 179 CESSSYPYILRTVID-QLSNIDRVDIVLCNTFDKLEEKLLKWIKSVWPVLNIGPTVPSMY 237
Query: 246 LDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKS 305
LDK++ +DK+YGFS+F + CM+WLN + SVVYVS+GS V LK +++ ELA GLK
Sbjct: 238 LDKRLAEDKNYGFSLFGAKIAECMEWLNSKQPSSVVYVSFGSLVVLKKDQLIELAAGLKQ 297
Query: 306 SDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNST 365
S FLWVVRE+E+ KLP+ + +E K L VSW PQLEVL H++ GCFVTHCGWNST
Sbjct: 298 SGHFFLWVVRETERRKLPENYIEE--IGEKGLTVSWSPQLEVLTHKSIGCFVTHCGWNST 355
Query: 366 MEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP-----IVKRDAIADCISEILEGE 420
+E LSLGVPM+ MP W+DQ TNAK++ DVWK G++ V+R+ + E++E E
Sbjct: 356 LEGLSLGVPMIGMPHWADQPTNAKFMEDVWKVGVRVKADSDGFVRREEFVRRVEEVMEAE 415
Query: 421 RGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLAC 459
+GKE+R+NA KW+ LA+EAV++GGSSD NI+EFV S+ C
Sbjct: 416 QGKEIRKNAEKWKVLAQEAVSEGGSSDKNINEFV-SMFC 453
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
| >sp|Q6X1C0|GLT2_CROSA Crocetin glucosyltransferase 2 OS=Crocus sativus GN=GLT2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 400 bits (1027), Expect = e-110, Method: Compositional matrix adjust.
Identities = 196/446 (43%), Positives = 279/446 (62%), Gaps = 11/446 (2%)
Query: 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGY 74
H L+L P QGHINP+LQF +RL + TLV TRF S S + ++ ISDG+
Sbjct: 8 HILLLPCPAQGHINPILQFGKRLASHNLLTTLVNTRFLSNSTK--SEPGPVNIQCISDGF 65
Query: 75 DEGGYAQAESIEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFG 134
D GG A S AY +R Q L+E + P C + LWA++VA++ G
Sbjct: 66 DPGGMNAAPSRRAYFDRPQSRSGQKHVGLIESLRSRGRPGACFGLRPVPLWAMNVAERSG 125
Query: 135 LLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNEILLPGMPPLEPQDMPSFIHDLGSYPAV 194
L F TQ CAVD IY HV +G +++P+ + LPG+PPLEP D+P + G
Sbjct: 126 LRSVAFFTQPCAVDTIYRHVWEGRIKVPVA-EPVRLPGLPPLEPSDLPCVRNGFGRVVNP 184
Query: 195 SYMMMKF-QFENIDKADWVLCNTFYELEEEVVEWLRKTWSLRTIGPTIPSFYLDKQIEDD 253
+ ++ Q +N+DKAD + N+ YELE ++++ R +++IGPT+PS YLD +I D
Sbjct: 185 DLLPLRVNQHKNLDKADMMGRNSIYELEADLLDGSRLPLPVKSIGPTVPSTYLDNRIPSD 244
Query: 254 KDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWV 313
YGF+++ T + WL+ +A SV+YVS+GS L ++ E+A GL ++++ F+WV
Sbjct: 245 SHYGFNLYTPDTTPYLDWLDSKAPNSVIYVSFGSLSSLSPDQTNEIASGLIATNKSFIWV 304
Query: 314 VRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGV 373
VR SE AKLP F+ E + + LVV+WC QL++LAH ATGCFVTHCGWNSTME ++LGV
Sbjct: 305 VRTSELAKLPANFTQE--NASRGLVVTWCDQLDLLAHVATGCFVTHCGWNSTMEGVALGV 362
Query: 374 PMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIAD-----CISEILEGERGKELRRN 428
PMV +PQWSDQ NAKY+ DVWK G++ +D + C+ E+++GER ++R N
Sbjct: 363 PMVGVPQWSDQPMNAKYVEDVWKVGVRAKTYGKDFVRGEEFKRCVEEVMDGERSGKIREN 422
Query: 429 AGKWRKLAKEAVAKGGSSDSNIDEFV 454
A +W KLAK++V++GGSSD I EF+
Sbjct: 423 AARWCKLAKDSVSEGGSSDKCIKEFI 448
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Crocetin glucosyltransferase involved in the synthesis of crocin, one of the apocarotenoids responsible for the color and bitter taste of saffron. Crocus sativus (taxid: 82528) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 7 EC: 1 |
| >sp|Q9SKC1|U74C1_ARATH UDP-glycosyltransferase 74C1 OS=Arabidopsis thaliana GN=UGT74C1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 399 bits (1024), Expect = e-110, Method: Compositional matrix adjust.
Identities = 200/463 (43%), Positives = 291/463 (62%), Gaps = 20/463 (4%)
Query: 9 TSCKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSS---SI 65
+ K H L YP QGHINP++Q ++RL KGI TL+ HR+ +S SI
Sbjct: 2 SEAKKGHVLFFPYPLQGHINPMIQLAKRLSKKGITSTLIIA----SKDHREPYTSDDYSI 57
Query: 66 PLEAISDGYDEGGYAQAESIEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLW 125
+ I DG+ + A+ ++ L+RF ++LT+ + SD+P ++YD + +
Sbjct: 58 TVHTIHDGFFPHEHPHAKFVD--LDRFHNSTSRSLTDFISSAKLSDNPPKALIYDPFMPF 115
Query: 126 ALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNE----ILLPGMPPLEPQDM 181
ALD+AK L + TQ +YYH+ +G+ ++P+ +E PG P L D+
Sbjct: 116 ALDIAKDLDLYVVAYFTQPWLASLVYYHINEGTYDVPVDRHENPTLASFPGFPLLSQDDL 175
Query: 182 PSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTWSLRTIGPTI 241
PSF + GSYP + +++ QF N+ +AD +LCNTF +LE +VV+W+ W ++ IGP +
Sbjct: 176 PSFACEKGSYPLLHEFVVR-QFSNLLQADCILCNTFDQLEPKVVKWMNDQWPVKNIGPVV 234
Query: 242 PSFYLDKQIEDDKDYGFSMFKSST-EACMKWLNDRAKESVVYVSYGSFVELKAEEMEELA 300
PS +LD ++ +DKDY K+ E+ +KWL +R +SVVYV++G+ V L ++M+E+A
Sbjct: 235 PSKFLDNRLPEDKDYELENSKTEPDESVLKWLGNRPAKSVVYVAFGTLVALSEKQMKEIA 294
Query: 301 WGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHC 360
+ + HFLW VRESE++KLP F +E LV W PQLEVLAHE+ GCFV+HC
Sbjct: 295 MAISQTGYHFLWSVRESERSKLPSGFIEEAEEKDSGLVAKWVPQLEVLAHESIGCFVSHC 354
Query: 361 GWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP-----IVKRDAIADCISE 415
GWNST+EAL LGVPMV +PQW+DQ TNAK+I DVWK G++ + ++ IA CI E
Sbjct: 355 GWNSTLEALCLGVPMVGVPQWTDQPTNAKFIEDVWKIGVRVRTDGEGLSSKEEIARCIVE 414
Query: 416 ILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLA 458
++EGERGKE+R+N K + LA+EA+++GGSSD IDEFVA L
Sbjct: 415 VMEGERGKEIRKNVEKLKVLAREAISEGGSSDKKIDEFVALLT 457
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
| >sp|Q9SKC5|U74D1_ARATH UDP-glycosyltransferase 74D1 OS=Arabidopsis thaliana GN=UGT74D1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 393 bits (1009), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/458 (43%), Positives = 296/458 (64%), Gaps = 22/458 (4%)
Query: 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDS---SSSSIPLE-- 68
A+ LV ++P QGHINPLLQFS+RL K + VT +TT + S+ R + ++++PL
Sbjct: 7 ANVLVFSFPIQGHINPLLQFSKRLLSKNVNVTFLTTSSTHNSILRRAITGGATALPLSFV 66
Query: 69 AISDGYDEGGYAQAESIEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALD 128
I DG++E + ++ Y +F + ++L+EL+ M D + +VYDS L + LD
Sbjct: 67 PIDDGFEED-HPSTDTSPDYFAKFQENVSRSLSELISSM---DPKPNAVVYDSCLPYVLD 122
Query: 129 VAKKF-GLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNEILLPGMPPLEPQDMPSFIHD 187
V +K G+ A F TQS V+ Y H +G E N+++LP MPPL+ D+P F++D
Sbjct: 123 VCRKHPGVAAASFFTQSSTVNATYIHFLRG--EFKEFQNDVVLPAMPPLKGNDLPVFLYD 180
Query: 188 LGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTWSLRTIGPTIPSFYLD 247
+ + ++ QF N+D D+ L N+F ELE EV++W++ W ++ IGP IPS YLD
Sbjct: 181 -NNLCRPLFELISSQFVNVDDIDFFLVNSFDELEVEVLQWMKNQWPVKNIGPMIPSMYLD 239
Query: 248 KQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSD 307
K++ DKDYG ++F + C+ WL+ + SV+YVS+GS LK ++M E+A GLK +
Sbjct: 240 KRLAGDKDYGINLFNAQVNECLDWLDSKPPGSVIYVSFGSLAVLKDDQMIEVAAGLKQTG 299
Query: 308 QHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTME 367
+FLWVVRE+E KLP + ++ K L+V+W PQL+VLAH++ GCF+THCGWNST+E
Sbjct: 300 HNFLWVVRETETKKLPSNYIED--ICDKGLIVNWSPQLQVLAHKSIGCFMTHCGWNSTLE 357
Query: 368 ALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP-----IVKRDAIADCISEILE--GE 420
ALSLGV ++ MP +SDQ TNAK+I DVWK G++ V ++ I C+ E++E E
Sbjct: 358 ALSLGVALIGMPAYSDQPTNAKFIEDVWKVGVRVKADQNGFVPKEEIVRCVGEVMEDMSE 417
Query: 421 RGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLA 458
+GKE+R+NA + + A+EA++ GG+SD NIDEFVA +
Sbjct: 418 KGKEIRKNARRLMEFAREALSDGGNSDKNIDEFVAKIV 455
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Glucosyltransferase that glucosylates jasmonate (JA) and JA derivatives. Also active on indole-3-acetic acid (IAA), 4-coumrate, cinnamate and caffeate. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
| >sp|Q41819|IABG_MAIZE Indole-3-acetate beta-glucosyltransferase OS=Zea mays GN=IAGLU PE=1 SV=1 | Back alignment and function description |
|---|
Score = 374 bits (959), Expect = e-102, Method: Compositional matrix adjust.
Identities = 202/466 (43%), Positives = 276/466 (59%), Gaps = 34/466 (7%)
Query: 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGY 74
H LV+ +PGQGH+NP++QF++RL KG+ TLVTTRF ++ D+ + + EAISDG+
Sbjct: 4 HVLVVPFPGQGHMNPMVQFAKRLASKGVATTLVTTRFIQRTADVDAHPAMV--EAISDGH 61
Query: 75 DEGGYAQAESIEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFG 134
DEGG+A A + YLE+ +L LVE S C+VYDS W L VA++ G
Sbjct: 62 DEGGFASAAGVAEYLEKQAAAASASLASLVEARASSADAFTCVVYDSYEDWVLPVARRMG 121
Query: 135 LLGAPFLTQSCAVDYIYYHVKKGSLELPLTG--------------NEILLPGMPPLEPQD 180
L PF TQSCAV +YYH +G L +P +E L G+P +E +
Sbjct: 122 LPAVPFSTQSCAVSAVYYHFSQGRLAVPPGAAADGSDGGAGAAALSEAFL-GLPEMERSE 180
Query: 181 MPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTWSLRTIGPT 240
+PSF+ D G YP ++ +K QF + K DWVL N+F ELE EV+ L K R IGP
Sbjct: 181 LPSFVFDHGPYPTIAMQAIK-QFAHAGKDDWVLFNSFEELETEVLAGLTKYLKARAIGPC 239
Query: 241 IPSFYLDKQIEDDK--DYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEE 298
+P + + YG ++ K +AC KWL+ + SV YVS+GS L + EE
Sbjct: 240 VPLPTAGRTAGANGRITYGANLVKPE-DACTKWLDTKPDRSVAYVSFGSLASLGNAQKEE 298
Query: 299 LAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVT 358
LA GL ++ + FLWVVR S++ ++P+ E + ++VV WCPQL+VLAH A GCFVT
Sbjct: 299 LARGLLAAGKPFLWVVRASDEHQVPRYLLAEATATGAAMVVPWCPQLDVLAHPAVGCFVT 358
Query: 359 HCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDA---------I 409
HCGWNST+EALS GVPMVAM W+DQ TNA+ + W G++ +RDA +
Sbjct: 359 HCGWNSTLEALSFGVPMVAMALWTDQPTNARNVELAWGAGVR---ARRDAGAGVFLRGEV 415
Query: 410 ADCISEILE-GERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFV 454
C+ +++ GE R+ AG+WR A+ AVA GGSSD N+DEFV
Sbjct: 416 ERCVRAVMDGGEAASAARKAAGEWRDRARAAVAPGGSSDRNLDEFV 461
|
Zea mays (taxid: 4577) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 2 EC: 1 |
| >sp|O48676|U74B1_ARATH UDP-glycosyltransferase 74B1 OS=Arabidopsis thaliana GN=UGT74B1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 367 bits (942), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/458 (42%), Positives = 285/458 (62%), Gaps = 21/458 (4%)
Query: 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDG 73
H ++L YP QGH+NP++QF++RL K +KVT+ TT + S+ ++ S+ +E ISDG
Sbjct: 10 GHVVILPYPVQGHLNPMVQFAKRLVSKNVKVTIATTTYTASSI----TTPSLSVEPISDG 65
Query: 74 YDEGGYA-QAESIEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKK 132
+D S++ Y E F G +TLT L+EK +DSP+DC++YDS L W L+VA+
Sbjct: 66 FDFIPIGIPGFSVDTYSESFKLNGSETLTLLIEKFKSTDSPIDCLIYDSFLPWGLEVARS 125
Query: 133 FGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNE--ILLPGMPPLEPQDMPSFI--HDL 188
L A F T + V + G LP N + G+P L ++PSF+ H L
Sbjct: 126 MELSAASFFTNNLTVCSVLRKFSNGDFPLPADPNSAPFRIRGLPSLSYDELPSFVGRHWL 185
Query: 189 GSYPAVSYMMMKFQFENIDKADWVLCNTFYELEE--EVVEWLRKTWSLRTIGPTIPSFYL 246
++P +++ QF N + ADW+ N F LEE + IGP IPS YL
Sbjct: 186 -THPEHGRVLLN-QFPNHENADWLFVNGFEGLEETQDCENGESDAMKATLIGPMIPSAYL 243
Query: 247 DKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSS 306
D ++EDDKDYG S+ K ++ CM+WL + +SV +VS+GSF L +++ E+A L+ S
Sbjct: 244 DDRMEDDKDYGASLLKPISKECMEWLETKQAQSVAFVSFGSFGILFEKQLAEVAIALQES 303
Query: 307 DQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTM 366
D +FLWV++E+ AKLP+ F + T ++L+VSWC QLEVLAHE+ GCF+THCGWNST+
Sbjct: 304 DLNFLWVIKEAHIAKLPEGFVEST--KDRALLVSWCNQLEVLAHESIGCFLTHCGWNSTL 361
Query: 367 EALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP------IVKRDAIADCISEILEGE 420
E LSLGVPMV +PQWSDQ +AK++ +VWK G + IVK + + C+ ++EGE
Sbjct: 362 EGLSLGVPMVGVPQWSDQMNDAKFVEEVWKVGYRAKEEAGEVIVKSEELVRCLKGVMEGE 421
Query: 421 RGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLA 458
++R ++ KW+ LA +A+++GGSSD +I+EF+ SL
Sbjct: 422 SSVKIRESSKKWKDLAVKAMSEGGSSDRSINEFIESLG 459
|
Involved in the biosynthesis of glucosinolate. In in vitro assay, may use phenylacetothiohydroximate (PATH), but not phenylacetic acid (PAA), indole-3-acetic acid (IAA) or salicylic acid (SA) as substrate. Specific for the thiohydroximate functional group and does not glucosylate the carboxylate group or a hydroxyl group. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 9 EC: 5 |
| >sp|Q5XF20|U84A1_ARATH UDP-glycosyltransferase 84A1 OS=Arabidopsis thaliana GN=UGT84A1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 304 bits (779), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 167/470 (35%), Positives = 268/470 (57%), Gaps = 35/470 (7%)
Query: 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDS----------SSSS 64
H +++++ GQGH+NPLL+ + + KG+ VT VTT + K + + + S S
Sbjct: 19 HVMLVSFQGQGHVNPLLRLGKLIASKGLLVTFVTTELWGKKMRQANKIVDGELKPVGSGS 78
Query: 65 IPLEAISDGYDEGGYAQAESIEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILL 124
I E + + E +A+ Y+ +G + +++LV + ++ PV C++ + +
Sbjct: 79 IRFEFFDEEWAEDDDRRAD-FSLYIAHLESVGIREVSKLVRRYEEANEPVSCLINNPFIP 137
Query: 125 WALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGN---EILLPGMPPLEPQDM 181
W VA++F + A QSCA YYH + GS+ P ++ LP +P L+ ++
Sbjct: 138 WVCHVAEEFNIPCAVLWVQSCACFSAYYHYQDGSVSFPTETEPELDVKLPCVPVLKNDEI 197
Query: 182 PSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTWSLRTIGPTI 241
PSF+H + ++ QF+N+ K+ VL ++F LE+EV++++ ++T+GP
Sbjct: 198 PSFLHPSSRFTGFRQAILG-QFKNLSKSFCVLIDSFDSLEQEVIDYMSSLCPVKTVGPL- 255
Query: 242 PSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAW 301
F + + + D ST+ C++WL+ R K SVVY+S+G+ LK E++EE+A
Sbjct: 256 --FKVARTVTSDVSGDIC---KSTDKCLEWLDSRPKSSVVYISFGTVAYLKQEQIEEIAH 310
Query: 302 GLKSSDQHFLWVVR------ESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGC 355
G+ S FLWV+R + E LP++ E+ K ++V WCPQ +VL+H + C
Sbjct: 311 GVLKSGLSFLWVIRPPPHDLKVETHVLPQELK-ESSAKGKGMIVDWCPQEQVLSHPSVAC 369
Query: 356 FVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKF-------PIVKRDA 408
FVTHCGWNSTME+LS GVP+V PQW DQ T+A Y++DV+KTG++ +V R+
Sbjct: 370 FVTHCGWNSTMESLSSGVPVVCCPQWGDQVTDAVYLIDVFKTGVRLGRGATEERVVPREE 429
Query: 409 IADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLA 458
+A+ + E GE+ +ELR+NA KW+ A+ AVA GGSSD N EFV L
Sbjct: 430 VAEKLLEATVGEKAEELRKNALKWKAEAEAAVAPGGSSDKNFREFVEKLG 479
|
Glucosyltransferase that glucosylates 4-coumarate, ferulate, caffeate, sinapate and cinnamate. Can glucosylate the phytotoxic xenobiotic compound 2,4,5-trichlorophenol (TCP). Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 2 EC: 6 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 464 | ||||||
| 242199344 | 468 | UDP-glucosyltransferase family 1 protein | 0.991 | 0.982 | 0.786 | 0.0 | |
| 224129334 | 459 | predicted protein [Populus trichocarpa] | 0.967 | 0.978 | 0.661 | 1e-176 | |
| 255583381 | 458 | UDP-glucosyltransferase, putative [Ricin | 0.976 | 0.989 | 0.623 | 1e-165 | |
| 356559587 | 461 | PREDICTED: UDP-glycosyltransferase 74E2- | 0.948 | 0.954 | 0.586 | 1e-157 | |
| 225468356 | 456 | PREDICTED: UDP-glycosyltransferase 74E2 | 0.948 | 0.964 | 0.606 | 1e-156 | |
| 359480385 | 456 | PREDICTED: UDP-glycosyltransferase 74E2- | 0.948 | 0.964 | 0.604 | 1e-156 | |
| 359480393 | 456 | PREDICTED: UDP-glycosyltransferase 74E2 | 0.946 | 0.962 | 0.603 | 1e-154 | |
| 225434164 | 457 | PREDICTED: UDP-glycosyltransferase 74F2 | 0.954 | 0.969 | 0.573 | 1e-150 | |
| 387135142 | 441 | UDP-glycosyltransferase 1 [Linum usitati | 0.920 | 0.968 | 0.601 | 1e-149 | |
| 209954701 | 463 | UDP-glucose:glucosyltransferase [Lycium | 0.950 | 0.952 | 0.556 | 1e-149 |
| >gi|242199344|gb|ACS87993.1| UDP-glucosyltransferase family 1 protein [Citrus sinensis] | Back alignment and taxonomy information |
|---|
Score = 756 bits (1953), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/469 (78%), Positives = 413/469 (88%), Gaps = 9/469 (1%)
Query: 1 MENNGKKPTSCKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDS 60
MEN KK SC+L HCLVL+YP QGHINPLLQF++RL HKG+KVTLVTT F KSLHRDS
Sbjct: 1 MENIEKKAASCRLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTCFISKSLHRDS 60
Query: 61 SSSS--IPLEAISDGYDEGGYAQAESIEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIV 118
SSSS I LEAISDGYDEGG AQAESIEAYLE+FWQIGP++L ELVE+MNGS PVDCIV
Sbjct: 61 SSSSTSIALEAISDGYDEGGSAQAESIEAYLEKFWQIGPRSLCELVEEMNGSGVPVDCIV 120
Query: 119 YDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNEILLPGMPPLEP 178
YDS L WALDVAKKFGL+GA FLTQSCAVD IYYHV KG L LPL +++LLPGMPPLEP
Sbjct: 121 YDSFLPWALDVAKKFGLVGAAFLTQSCAVDCIYYHVNKGLLMLPLPDSQLLLPGMPPLEP 180
Query: 179 QDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTWSLRTIG 238
DMPSF++DLGSYPAVS M++K+QF+NIDKADWVLCNTFYELEEEV EWL K WSL+TIG
Sbjct: 181 HDMPSFVYDLGSYPAVSDMVVKYQFDNIDKADWVLCNTFYELEEEVAEWLGKLWSLKTIG 240
Query: 239 PTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEE 298
PT+PS YLDKQ+EDDKDYGFSMFK + E+C+KWLNDRAK SVVYVS+GS+ +LK EEMEE
Sbjct: 241 PTVPSLYLDKQLEDDKDYGFSMFKPNNESCIKWLNDRAKGSVVYVSFGSYAQLKVEEMEE 300
Query: 299 LAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVT 358
LAWGLK+++Q+FLWVVRESEQAKLP+ FSDE TS K LVV+WCPQLEVLAHEATGCF+T
Sbjct: 301 LAWGLKATNQYFLWVVRESEQAKLPENFSDE--TSQKGLVVNWCPQLEVLAHEATGCFLT 358
Query: 359 HCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP-----IVKRDAIADCI 413
HCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYI+DVWKTGLK P IV+R+AIA CI
Sbjct: 359 HCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYIMDVWKTGLKVPADEKGIVRREAIAHCI 418
Query: 414 SEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLACSKN 462
EILEGERGKE+R+NAG+W AKEAVAKGGSSD NID+FVA+L SK+
Sbjct: 419 REILEGERGKEIRQNAGEWSNFAKEAVAKGGSSDKNIDDFVANLISSKS 467
|
Source: Citrus sinensis Species: Citrus sinensis Genus: Citrus Family: Rutaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224129334|ref|XP_002320558.1| predicted protein [Populus trichocarpa] gi|222861331|gb|EEE98873.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 625 bits (1612), Expect = e-176, Method: Compositional matrix adjust.
Identities = 303/458 (66%), Positives = 371/458 (81%), Gaps = 9/458 (1%)
Query: 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAI 70
CK AHCLV+++P QGHINP+LQFS+RL+HKG+KVT VTTRF ++ SSSSSI L+ I
Sbjct: 5 CK-AHCLVVSFPAQGHINPMLQFSKRLEHKGVKVTPVTTRFISNAIMSGSSSSSISLQTI 63
Query: 71 SDGYDEGGYAQAESIEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVA 130
SDGYDEGG AESI++YL+RFW++G QTL LVEK++GSD PVDCI+YD+ + W LDVA
Sbjct: 64 SDGYDEGGIGHAESIKSYLDRFWKVGLQTLDNLVEKLSGSDCPVDCIIYDAFMPWGLDVA 123
Query: 131 KKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNEILLPGMPPLEPQDMPSFIHDLGS 190
KKFGL+GA F TQSCAVD IYYHV +G ++LP+T +IL+PG+PPLEPQD+PSFI+ LG+
Sbjct: 124 KKFGLVGAAFFTQSCAVDSIYYHVYRGLIKLPVTETQILVPGLPPLEPQDLPSFIYHLGT 183
Query: 191 YPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTWSLRTIGPTIPSFYLDKQI 250
YP M++ QF NID+ADWV CN+FY LE EV +W K W R+IGPTIPS YLDKQ+
Sbjct: 184 YPDFFDMLLD-QFSNIDRADWVFCNSFYMLEREVADWFAKLWPFRSIGPTIPSMYLDKQL 242
Query: 251 EDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHF 310
E+D+DYGFS F + + CM WLNDRAK SVV+VS+GS V+LKAE+MEELAWGLK SD +F
Sbjct: 243 ENDRDYGFSFFMQNNDVCMNWLNDRAKGSVVHVSFGSLVDLKAEQMEELAWGLKRSDCYF 302
Query: 311 LWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALS 370
LWVVR SE++K+ K F++E +S K LVV WC QLEVLAHEA GCFVTHCGWNS++EALS
Sbjct: 303 LWVVRASEESKMSKDFAEE--SSAKGLVVRWCSQLEVLAHEAVGCFVTHCGWNSSLEALS 360
Query: 371 LGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP-----IVKRDAIADCISEILEGERGKEL 425
LGVPMVAMPQ +DQSTNAKYI DVW G+K I +R+ I CI EILEGE+GKE+
Sbjct: 361 LGVPMVAMPQRTDQSTNAKYITDVWNMGVKAAVDEKEIARRETIESCIKEILEGEKGKEI 420
Query: 426 RRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLACSKNS 463
+RNA KW++LAKEAV +GGSSD NIDEFVA+L S++S
Sbjct: 421 KRNASKWKELAKEAVEEGGSSDKNIDEFVANLVLSRSS 458
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255583381|ref|XP_002532451.1| UDP-glucosyltransferase, putative [Ricinus communis] gi|223527841|gb|EEF29937.1| UDP-glucosyltransferase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 587 bits (1514), Expect = e-165, Method: Compositional matrix adjust.
Identities = 290/465 (62%), Positives = 353/465 (75%), Gaps = 12/465 (2%)
Query: 1 MENNGKKPTSCKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDS 60
ME K TS HC+VL YP QGHINP+LQFS+R+QHKG+KVTLVTTRF YK+L
Sbjct: 1 MEQEKKGRTS----HCIVLAYPIQGHINPMLQFSKRIQHKGVKVTLVTTRFIYKTLMHKP 56
Query: 61 SSSSIPLEAISDGYDEGGYAQAESIEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYD 120
S+S+ LE ISDGYD+GG AESI+ YL+ F ++G QTLT+LV K++ S PVDCIVYD
Sbjct: 57 PSTSVDLETISDGYDDGGIDDAESIKVYLDTFRKVGSQTLTDLVHKLSISGCPVDCIVYD 116
Query: 121 SILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNEILLPGMPPLEPQD 180
+ L W L+VAKKFG+ GA + TQSCAVD IYYH +G +ELPL +I +PG+PPL+PQD
Sbjct: 117 AFLPWCLEVAKKFGIYGAVYFTQSCAVDIIYYHANQGLIELPLKEIKISVPGLPPLQPQD 176
Query: 181 MPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTWSLRTIGPT 240
+PSF++ G+YPA ++ M+ QF NI KADWVLCNTFYELE E +WL K W LRTIGPT
Sbjct: 177 LPSFLYQFGTYPA-AFEMLVDQFSNIGKADWVLCNTFYELEYEAADWLAKLWPLRTIGPT 235
Query: 241 IPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELA 300
IPS YLDKQ++DD+DYGF++FK + +ACM WL D+ K SVVYVS+GS L E+MEEL+
Sbjct: 236 IPSMYLDKQLQDDRDYGFNIFKPNDDACMNWLKDKPKGSVVYVSFGSLATLGVEQMEELS 295
Query: 301 WGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHC 360
WGLK SD +FLWVVR E+AKLPK F E + K LVV WCPQL+VL +EA G F+THC
Sbjct: 296 WGLKMSDSYFLWVVRAPEEAKLPKNFMSE--ITEKGLVVKWCPQLQVLGNEAVGSFLTHC 353
Query: 361 GWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP-----IVKRDAIADCISE 415
GWNST+EALSLGVPMVAMPQW+DQ+TNAKYI DVWK G++ P I +RDAI +CI E
Sbjct: 354 GWNSTLEALSLGVPMVAMPQWTDQTTNAKYIEDVWKMGVRVPVDEKGIGRRDAIRECIRE 413
Query: 416 ILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLACS 460
++EGER E+ NA KWR LA+ A +GGSSD NI EFV L S
Sbjct: 414 VMEGERRTEMDVNAKKWRNLAQMAAGEGGSSDKNIREFVVKLGRS 458
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356559587|ref|XP_003548080.1| PREDICTED: UDP-glycosyltransferase 74E2-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 560 bits (1442), Expect = e-157, Method: Compositional matrix adjust.
Identities = 264/450 (58%), Positives = 342/450 (76%), Gaps = 10/450 (2%)
Query: 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDG 73
AHCLVL YP QGHINP+LQFS+RL +G+KVTLVT +K++ R+ + +SI +E+ISDG
Sbjct: 10 AHCLVLPYPAQGHINPMLQFSKRLVQRGVKVTLVTVVSNWKNM-RNKNFTSIEVESISDG 68
Query: 74 YDEGGYAQAESIEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKF 133
YD+GG A AES+EAY+E FW++G QT ELV+K+ GS P DC++YD+ + W LDVAKKF
Sbjct: 69 YDDGGLAAAESLEAYIETFWRVGSQTFAELVQKLAGSSHPPDCVIYDAFMPWVLDVAKKF 128
Query: 134 GLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNEILLPGMPPLEPQDMPSFIHDLGSYPA 193
GLLGA F TQ+C + IY+HV K +ELPLT E LLPG+P L D+PSF++ GSYP
Sbjct: 129 GLLGATFFTQTCTTNNIYFHVYKKLIELPLTQAEYLLPGLPKLAAGDLPSFLNKYGSYPG 188
Query: 194 VSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTWSLRTIGPTIPSFYLDKQIEDD 253
+++ QF NIDKADWVL N+FYELE+ VV+WL K W L+ IGP +PS YLDK+++DD
Sbjct: 189 YFDVVVN-QFVNIDKADWVLANSFYELEQGVVDWLVKIWPLKPIGPCLPSIYLDKRLQDD 247
Query: 254 KDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWV 313
KDYG +M+ ++EAC+KWL+++ K SVVYVS+GS L E+ EELAWGL S +F+WV
Sbjct: 248 KDYGVNMYNPNSEACIKWLDEKPKGSVVYVSFGSMAGLNEEQTEELAWGLGDSGSYFMWV 307
Query: 314 VRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGV 373
+R+ ++ KLPK+F+D TS K L+VSWCPQL+VL HEA GCF+THCGWNST+EALSLGV
Sbjct: 308 IRDCDKGKLPKEFAD---TSEKGLIVSWCPQLQVLTHEALGCFLTHCGWNSTLEALSLGV 364
Query: 374 PMVAMPQWSDQSTNAKYILDVWKTGLKF-----PIVKRDAIADCISEILEGERGKELRRN 428
P++AMP W+DQ TNAK + DVWK G+K IV+R+ I CI EILE E+G E+++N
Sbjct: 365 PVIAMPLWTDQITNAKLLKDVWKIGVKAVADEKEIVRRETITHCIKEILETEKGNEIKKN 424
Query: 429 AGKWRKLAKEAVAKGGSSDSNIDEFVASLA 458
A KW+ LAK V +GG+SD NI EFV LA
Sbjct: 425 AIKWKNLAKSYVDEGGNSDKNIAEFVEELA 454
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225468356|ref|XP_002273866.1| PREDICTED: UDP-glycosyltransferase 74E2 isoform 1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 558 bits (1439), Expect = e-156, Method: Compositional matrix adjust.
Identities = 273/450 (60%), Positives = 337/450 (74%), Gaps = 10/450 (2%)
Query: 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDG 73
AHC+VL YP QGHINP+LQFS+RL H G KVTL TRF KSL DS I +E ISDG
Sbjct: 10 AHCIVLPYPSQGHINPMLQFSKRLVHNGAKVTLAATRFISKSLVGDSGP--ITIETISDG 67
Query: 74 YDEGGYAQAESIEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKF 133
YDEGG AQAES AYLERF +G +TL L+EK+ S PVDC+VYD+ L WALDVAKK
Sbjct: 68 YDEGGSAQAESDGAYLERFQVVGSETLGSLIEKLKSSGCPVDCVVYDAFLPWALDVAKKL 127
Query: 134 GLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNEILLPGMPPLEPQDMPSFIHDLGSYPA 193
GL+GA F TQSC V+ IYYHV +G L+LPL+ E+++PG+ PL+ D+PSF++ GSYPA
Sbjct: 128 GLVGAVFFTQSCTVNNIYYHVHQGMLKLPLSEPEVVVPGLFPLQACDLPSFVYLYGSYPA 187
Query: 194 VSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTWSLRTIGPTIPSFYLDKQIEDD 253
M++ QF NI+K DWV CNTFY+LEE+VV+W+ K LRTIGPT+PS YLDK++ DD
Sbjct: 188 FFDMVVN-QFSNIEKVDWVFCNTFYKLEEKVVDWMAKICPLRTIGPTLPSAYLDKRLGDD 246
Query: 254 KDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWV 313
KDYG +M K T ACM+WL+ + SVVY SYGSF L+ E+MEE+AWGL+ S+ +FL V
Sbjct: 247 KDYGLNMLKPVTGACMEWLDSKPNGSVVYASYGSFAVLEPEQMEEVAWGLRRSNAYFLMV 306
Query: 314 VRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGV 373
VRESEQAKLP+ F +E T+ K LVVSWCPQLEVL H A GCF+TH GWNST+EALSLGV
Sbjct: 307 VRESEQAKLPQNFKEE--TAEKGLVVSWCPQLEVLTHRAIGCFLTHGGWNSTLEALSLGV 364
Query: 374 PMVAMPQWSDQSTNAKYILDVWKTGLKF-----PIVKRDAIADCISEILEGERGKELRRN 428
PMV P W+DQ TNAK++ DVW GL+ IV+R+ + DCI +++ + KE++ N
Sbjct: 365 PMVVAPLWTDQPTNAKFVEDVWGIGLRARADHKGIVRREVLEDCIGKVMGSDGLKEIKNN 424
Query: 429 AGKWRKLAKEAVAKGGSSDSNIDEFVASLA 458
A KW+ LA+EAV +GGSSD IDEFVA LA
Sbjct: 425 AMKWKNLAREAVDEGGSSDKCIDEFVAKLA 454
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359480385|ref|XP_003632443.1| PREDICTED: UDP-glycosyltransferase 74E2-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 556 bits (1433), Expect = e-156, Method: Compositional matrix adjust.
Identities = 272/450 (60%), Positives = 337/450 (74%), Gaps = 10/450 (2%)
Query: 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDG 73
AHC+VL YP QGHINP+LQFS+RL H G KVTL TRF KS DS I +E ISDG
Sbjct: 10 AHCIVLPYPSQGHINPMLQFSKRLVHNGAKVTLAATRFISKSFVGDSGP--ITIETISDG 67
Query: 74 YDEGGYAQAESIEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKF 133
YDEGG AQAES AYLERF +G +TL L+EK+ S PVDC+VYD+ L WALDVAK+
Sbjct: 68 YDEGGSAQAESDGAYLERFRVVGSETLGSLIEKLKSSGCPVDCVVYDAFLPWALDVAKQL 127
Query: 134 GLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNEILLPGMPPLEPQDMPSFIHDLGSYPA 193
GL+GA F TQSC V+ IYYHV +G L+LPL+ E+++PG+ PL+ D+PSF++ GSYPA
Sbjct: 128 GLVGAVFFTQSCTVNDIYYHVHQGMLKLPLSEPEVVVPGLFPLQACDLPSFVYLYGSYPA 187
Query: 194 VSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTWSLRTIGPTIPSFYLDKQIEDD 253
M++ QF NI+K DWV CNTFY+LEE+VV+W+ K LRTIGPT+PS YLDK++ DD
Sbjct: 188 FFDMVVN-QFSNIEKVDWVFCNTFYKLEEKVVDWMAKICPLRTIGPTLPSVYLDKRLGDD 246
Query: 254 KDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWV 313
KDYG +M K T ACM+WL+ + SVVY SYGSF L+ E+MEE+AWGL+ S+ +FL V
Sbjct: 247 KDYGLNMLKPVTGACMEWLDSKPNGSVVYASYGSFAVLEPEQMEEVAWGLRRSNAYFLVV 306
Query: 314 VRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGV 373
VRESEQAKLP+ F +E T+ K LVVSWCPQLEVLAH A GCF+TH GWNST+EALSLGV
Sbjct: 307 VRESEQAKLPQNFKEE--TAEKGLVVSWCPQLEVLAHRAIGCFLTHGGWNSTLEALSLGV 364
Query: 374 PMVAMPQWSDQSTNAKYILDVWKTGLKF-----PIVKRDAIADCISEILEGERGKELRRN 428
PMV P W+DQ TNAK++ DVW GL+ IV+R+ + DCI +++ + KE++ N
Sbjct: 365 PMVVAPLWTDQPTNAKFVEDVWGIGLRARADHKGIVRREVLEDCIGKVMGSDGLKEIKNN 424
Query: 429 AGKWRKLAKEAVAKGGSSDSNIDEFVASLA 458
A KW+ LA+EAV +GGSSD IDEFVA LA
Sbjct: 425 AMKWKNLAREAVDEGGSSDKCIDEFVAKLA 454
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359480393|ref|XP_002269003.2| PREDICTED: UDP-glycosyltransferase 74E2 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 271/449 (60%), Positives = 336/449 (74%), Gaps = 10/449 (2%)
Query: 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDG 73
+HC+VL YP QGHINP+LQFS+RL H G KVTLV T F KSL DS I +E ISDG
Sbjct: 10 SHCIVLPYPSQGHINPMLQFSKRLVHNGAKVTLVPTCFISKSLLGDSGP--ITIETISDG 67
Query: 74 YDEGGYAQAESIEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKF 133
YDEGG+AQAES AY+ERF +G +TL L+EK+ S PVDC+VYD+ L WALDVAKKF
Sbjct: 68 YDEGGFAQAESGGAYMERFRVVGSETLGSLIEKLKSSGCPVDCVVYDAFLPWALDVAKKF 127
Query: 134 GLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNEILLPGMPPLEPQDMPSFIHDLGSYPA 193
GL+GA F TQSC V+ IYYHV +G L LPL+ E+++PG+ PL+ D+PS ++ GSYP
Sbjct: 128 GLVGAVFFTQSCTVNNIYYHVHQGMLTLPLSEPEVVVPGLFPLQACDLPSLVYLYGSYPD 187
Query: 194 VSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTWSLRTIGPTIPSFYLDKQIEDD 253
M++ QF NI+K DWV CNTFY+LEE+VV+W+ K LRTIGPT+PS YLDK++ DD
Sbjct: 188 FFNMLVN-QFSNIEKVDWVFCNTFYKLEEKVVDWMAKICPLRTIGPTLPSAYLDKRLGDD 246
Query: 254 KDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWV 313
KDYG +M K T ACM+WL+ + SVVY SYGSF +L+ E+MEELAWGL+ S+ +FL V
Sbjct: 247 KDYGLNMLKPVTGACMEWLDSKPNGSVVYASYGSFAKLEPEQMEELAWGLRRSNAYFLMV 306
Query: 314 VRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGV 373
VRESEQAKLP+KF +E T+ K LVVSWCPQLEVLAH A GCF+TH GWNST+EALSLGV
Sbjct: 307 VRESEQAKLPQKFKEE--TAEKGLVVSWCPQLEVLAHRAIGCFLTHGGWNSTLEALSLGV 364
Query: 374 PMVAMPQWSDQSTNAKYILDVWKTGLKF-----PIVKRDAIADCISEILEGERGKELRRN 428
PMV P W DQ TNAK++ DV GL+ IV+R+ + DCI +++ + KE++ N
Sbjct: 365 PMVVAPLWIDQPTNAKFVEDVCGVGLRARADDKGIVRREVLEDCIGKVMGSDGLKEIKNN 424
Query: 429 AGKWRKLAKEAVAKGGSSDSNIDEFVASL 457
A KW+ LA+EAV +GGSSD IDEFVA L
Sbjct: 425 ALKWKNLAREAVDEGGSSDKCIDEFVAKL 453
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225434164|ref|XP_002278455.1| PREDICTED: UDP-glycosyltransferase 74F2 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 536 bits (1381), Expect = e-150, Method: Compositional matrix adjust.
Identities = 261/455 (57%), Positives = 334/455 (73%), Gaps = 12/455 (2%)
Query: 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDG 73
AH L+L+YP QGHINP+LQFS+RL KG+K TL TT KS+ D SS + ++AISDG
Sbjct: 8 AHALLLSYPTQGHINPMLQFSKRLVSKGLKATLATTLSITKSMQLDCSS--VQIDAISDG 65
Query: 74 YDEGGYAQAESIEAYLERFWQIGPQTLTELVEKMNGSDS-PVDCIVYDSILLWALDVAKK 132
YD+GG+AQAES+EAYL+RF +G QTL EL+ K S P+DCI+YD+ L WALDVAK+
Sbjct: 66 YDDGGFAQAESVEAYLQRFQAVGSQTLAELIRKHKRSGQVPIDCIIYDAFLPWALDVAKE 125
Query: 133 FGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNEILLPGMPPLEPQDMPSFIHDLGSYP 192
FGL+GA F TQ+CAV YI+Y+V G L LP++ + +PG+P L+ +DMPSFI SYP
Sbjct: 126 FGLVGAAFFTQTCAVTYIFYYVHHGLLTLPVSSPPVSIPGLPLLDLEDMPSFISAPDSYP 185
Query: 193 AVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTWSLRTIGPTIPSFYLDKQIED 252
A M++ QF N+DKAD +L N+FY+LE+ VV+ + K +L TIGPTIPSF+ DK++ D
Sbjct: 186 AYLKMVLD-QFCNVDKADCILVNSFYKLEDSVVDAMSKVCTLLTIGPTIPSFFSDKRVND 244
Query: 253 DKDYGFSMFKS-STEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFL 311
D YG + FK+ +E C++WL+ + K SVVYVS+GS L E+M ELAWGLK S +FL
Sbjct: 245 DMAYGLNFFKAHQSETCIEWLSSKPKGSVVYVSFGSMASLSEEQMGELAWGLKGSSHYFL 304
Query: 312 WVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSL 371
WVVR SE+AKLPK F +E L K +V WCPQLEVLA A GCF THCGWNST EAL+L
Sbjct: 305 WVVRASEEAKLPKGFINEEL--EKGFLVRWCPQLEVLASNAIGCFFTHCGWNSTSEALTL 362
Query: 372 GVPMVAMPQWSDQSTNAKYILDVWKTGLKF-----PIVKRDAIADCISEILEGERGKELR 426
GVPMV MPQW+DQ+TNAK+I DVWK G++ +V+R+ I CI E++EGERGKE++
Sbjct: 363 GVPMVGMPQWTDQTTNAKFIKDVWKVGVRVREGEDGVVRREEIEACIREVMEGERGKEMK 422
Query: 427 RNAGKWRKLAKEAVAKGGSSDSNIDEFVASLACSK 461
NA KW +EAV +GG+SD NIDEFV+ L SK
Sbjct: 423 ENAMKWSGFTREAVGEGGTSDRNIDEFVSKLKVSK 457
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|387135142|gb|AFJ52952.1| UDP-glycosyltransferase 1 [Linum usitatissimum] | Back alignment and taxonomy information |
|---|
Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust.
Identities = 263/437 (60%), Positives = 332/437 (75%), Gaps = 10/437 (2%)
Query: 30 LLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGYAQAESIEAYL 89
+LQFS+RL K I++TLV TRF K++ SS+S+I L+ ISDGYD+GG+A AES +AYL
Sbjct: 1 MLQFSKRLLSKSIRITLVNTRFISKTISSTSSTSTINLDTISDGYDDGGHAAAESTQAYL 60
Query: 90 ERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDY 149
E F + G +TL+EL++K++ ++ P CI+YD L W LDVAK+ GL APF TQSCAVD
Sbjct: 61 ESFQKEGSKTLSELIQKLSKTEYPAHCIIYDPFLPWCLDVAKELGLFAAPFFTQSCAVDA 120
Query: 150 IYYHVKKGSLELPLTGN--EILLPGMP-PLEPQDMPSFIHDLGSYPAVSYMMMKFQFENI 206
IYYHV KGSL+LP+T +++PG+P PLE DMPSFI D GSYPA ++ M+ QF NI
Sbjct: 121 IYYHVYKGSLKLPVTDQPQSLIIPGLPAPLEADDMPSFISDYGSYPA-AFDMIISQFSNI 179
Query: 207 DKADWVLCNTFYELEEEVVEWLRKTWSLRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTE 266
KAD +LCNT Y+LE E +WL W LRT+GPTIPS YLDKQ++DD+DYGFS+FK + E
Sbjct: 180 HKADCILCNTVYDLENETADWLSTIWPLRTVGPTIPSMYLDKQLQDDRDYGFSIFKPNNE 239
Query: 267 ACMKWLND-RAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKK 325
AC+ WLN+ + K SV+YVS+GS L AE+MEE+A GLK+S+ +FLWVVR SE AKLP
Sbjct: 240 ACINWLNNNKPKGSVIYVSFGSLASLGAEQMEEIAHGLKNSNHYFLWVVRASEVAKLPPN 299
Query: 326 FSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQS 385
F+ + K L+VSWCPQLEVL HEA GCFVTHCGWNST+E LSLGVPMVAMPQW+DQ+
Sbjct: 300 FAADVDIDGKGLIVSWCPQLEVLEHEAVGCFVTHCGWNSTLEGLSLGVPMVAMPQWTDQA 359
Query: 386 TNAKYILDVWKTGLKFP-----IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAV 440
TNAKYI DVWK G++ IVKR+ + C+ ++EGE GKE++RNA KWRK+ KEA
Sbjct: 360 TNAKYIEDVWKMGVRCQKNEEGIVKREMVEKCLRGVMEGEEGKEMKRNADKWRKMMKEAA 419
Query: 441 AKGGSSDSNIDEFVASL 457
+GGSSD NI +FV SL
Sbjct: 420 GEGGSSDRNISDFVDSL 436
|
Source: Linum usitatissimum Species: Linum usitatissimum Genus: Linum Family: Linaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|209954701|dbj|BAG80541.1| UDP-glucose:glucosyltransferase [Lycium barbarum] | Back alignment and taxonomy information |
|---|
Score = 535 bits (1377), Expect = e-149, Method: Compositional matrix adjust.
Identities = 253/455 (55%), Positives = 343/455 (75%), Gaps = 14/455 (3%)
Query: 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDG 73
AHCL+L YP QGHINP+LQFS+RLQ KG+K+T+ TT+ F K++ ++S SI EAISDG
Sbjct: 6 AHCLILPYPSQGHINPMLQFSKRLQSKGVKITIATTKSFLKTMQELTTSVSI--EAISDG 63
Query: 74 YDEGGYAQAESIEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKF 133
YD+GG QA S AY+ RF ++G TL +L++K+ S PV+CIVYD L WA++VAK F
Sbjct: 64 YDDGGRDQAGSFVAYITRFKEVGSDTLAQLIKKLANSGCPVNCIVYDPFLPWAVEVAKDF 123
Query: 134 GLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGN--EILLPGMP-PLEPQDMPSFIHDLGS 190
GL+ A F TQ+CAVD IYYHV KG L+LP T + EIL+PG P+E D+PSF+ +
Sbjct: 124 GLVSAAFFTQNCAVDNIYYHVHKGVLKLPPTQDDEEILIPGFSCPIESSDVPSFV--ISP 181
Query: 191 YPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTWSLRTIGPTIPSFYLDKQI 250
A M+ QF N+DK DWVL N+FYELE+EV++W+ K + ++TIGPTIPS YLD ++
Sbjct: 182 EAARILDMLVNQFSNLDKVDWVLINSFYELEKEVIDWMSKIYPIKTIGPTIPSMYLDNRL 241
Query: 251 EDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHF 310
DDK+YG S+FK T C+ WLN + SVVYVS+GS +++ E+MEELAWGLK+S+++F
Sbjct: 242 PDDKEYGLSVFKPMTNECLNWLNHQLISSVVYVSFGSLAKVEVEQMEELAWGLKNSNKNF 301
Query: 311 LWVVRESEQAKLPKKFSDE--TLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEA 368
LWVVR +E++KLPK F +E ++ +K LVVSWCPQL+VL H++TGCF+THCGWNST+EA
Sbjct: 302 LWVVRSTEESKLPKNFLEELKLVSENKGLVVSWCPQLQVLEHKSTGCFLTHCGWNSTLEA 361
Query: 369 LSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP-----IVKRDAIADCISEILEGERGK 423
+SLGVPM+ MPQW+DQ TNAK + DVW+ G++ IV+R+ I +CI ++E E+GK
Sbjct: 362 ISLGVPMLTMPQWTDQPTNAKLVKDVWEMGVRAKQDEKGIVRREVIEECIKLVMEEEKGK 421
Query: 424 ELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLA 458
++ NA KW++LA++AV +GGSSD NI+EFV+ L
Sbjct: 422 MIKENAQKWKELARKAVDEGGSSDKNIEEFVSKLV 456
|
Source: Lycium barbarum Species: Lycium barbarum Genus: Lycium Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 464 | ||||||
| TAIR|locus:2043949 | 449 | UGT74F2 "UDP-glucosyltransfera | 0.931 | 0.962 | 0.501 | 3.5e-114 | |
| TAIR|locus:2044044 | 449 | UGT74F1 "UDP-glycosyltransfera | 0.928 | 0.959 | 0.488 | 3.5e-114 | |
| TAIR|locus:2031983 | 453 | UGT74E2 "AT1G05680" [Arabidops | 0.948 | 0.971 | 0.485 | 3.2e-113 | |
| TAIR|locus:2045268 | 457 | AT2G31790 [Arabidopsis thalian | 0.959 | 0.973 | 0.427 | 6.9e-102 | |
| TAIR|locus:2045238 | 456 | UGT74D1 "UDP-glucosyl transfer | 0.937 | 0.953 | 0.433 | 1.2e-99 | |
| TAIR|locus:2032387 | 460 | UGT74B1 "UDP-glucosyl transfer | 0.937 | 0.945 | 0.423 | 5.3e-95 | |
| TAIR|locus:2130205 | 490 | UGT84A1 "AT4G15480" [Arabidops | 0.935 | 0.885 | 0.360 | 2.1e-77 | |
| TAIR|locus:2089880 | 496 | UGT84A2 "UDP-glucosyl transfer | 0.946 | 0.885 | 0.344 | 2.9e-71 | |
| TAIR|locus:2130215 | 479 | UGT84A3 "AT4G15490" [Arabidops | 0.935 | 0.906 | 0.363 | 1.6e-70 | |
| TAIR|locus:2009557 | 489 | UGT85A1 [Arabidopsis thaliana | 0.743 | 0.705 | 0.338 | 3.7e-70 |
| TAIR|locus:2043949 UGT74F2 "UDP-glucosyltransferase 74F2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1126 (401.4 bits), Expect = 3.5e-114, P = 3.5e-114
Identities = 227/453 (50%), Positives = 307/453 (67%)
Query: 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDXXXXXIPLEAIS 71
K H L + YP QGHI P QF +RL KG+K TL T F + S++ D I + IS
Sbjct: 4 KRGHVLAVPYPTQGHITPFRQFCKRLHFKGLKTTLALTTFVFNSINPDLSGP-ISIATIS 62
Query: 72 DGYDEGGYAQAESIEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAK 131
DGYD GG+ A+SI+ YL+ F G +T+ ++++K SD+P+ CIVYD+ L WALDVA+
Sbjct: 63 DGYDHGGFETADSIDDYLKDFKTSGSKTIADIIQKHQTSDNPITCIVYDAFLPWALDVAR 122
Query: 132 KFGLLGAPFLTQSCAVDYIYY--HVKKGSLELPLTGNEILLPGMPPLEPQDMPSFIHDLG 189
+FGL+ PF TQ CAV+Y+YY ++ GSL+LP+ E+ P LE QD+PSF G
Sbjct: 123 EFGLVATPFFTQPCAVNYVYYLSYINNGSLQLPI--EEL-----PFLELQDLPSFFSVSG 175
Query: 190 SYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTWSLRTIGPTIPSFYLDKQ 249
SYPA M+++ QF N +KAD+VL N+F ELE E K + TIGPTIPS YLD++
Sbjct: 176 SYPAYFEMVLQ-QFINFEKADFVLVNSFQELELHENELWSKACPVLTIGPTIPSIYLDQR 234
Query: 250 IEDDKDYGFSMFKSSTEA-CMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQ 308
I+ D Y ++F+S ++ C+ WL+ R + SVVYV++GS +L +MEELA + S+
Sbjct: 235 IKSDTGYDLNLFESKDDSFCINWLDTRPQGSVVYVAFGSMAQLTNVQMEELASAV--SNF 292
Query: 309 HFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEA 368
FLWVVR SE+ KLP F ET+ KSLV+ W PQL+VL+++A GCF+THCGWNSTMEA
Sbjct: 293 SFLWVVRSSEEEKLPSGFL-ETVNKEKSLVLKWSPQLQVLSNKAIGCFLTHCGWNSTMEA 351
Query: 369 LSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP------IVKRDAIADCISEILEGERG 422
L+ GVPMVAMPQW+DQ NAKYI DVWK G++ I KR+ I I E++EGER
Sbjct: 352 LTFGVPMVAMPQWTDQPMNAKYIQDVWKAGVRVKTEKESGIAKREEIEFSIKEVMEGERS 411
Query: 423 KELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVA 455
KE+++N KWR LA +++ +GGS+D+NID FV+
Sbjct: 412 KEMKKNVKKWRDLAVKSLNEGGSTDTNIDTFVS 444
|
|
| TAIR|locus:2044044 UGT74F1 "UDP-glycosyltransferase 74 F1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1126 (401.4 bits), Expect = 3.5e-114, P = 3.5e-114
Identities = 221/452 (48%), Positives = 306/452 (67%)
Query: 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDXXXXXIPLEAISDGY 74
H L + +P QGHI P+ QF +RL KG K T T F + ++H D I + ISDGY
Sbjct: 7 HVLAVPFPSQGHITPIRQFCKRLHSKGFKTTHTLTTFIFNTIHLDPSSP-ISIATISDGY 65
Query: 75 DEGGYAQAESIEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFG 134
D+GG++ A S+ YL+ F G +T+ +++ K +D+P+ CIVYDS + WALD+A FG
Sbjct: 66 DQGGFSSAGSVPEYLQNFKTFGSKTVADIIRKHQSTDNPITCIVYDSFMPWALDLAMDFG 125
Query: 135 LLGAPFLTQSCAVDYIYY--HVKKGSLELPLTGNEILLPGMPPLEPQDMPSFIHDLGSYP 192
L APF TQSCAV+YI Y ++ GSL LP+ +P LE QD+P+F+ GS+
Sbjct: 126 LAAAPFFTQSCAVNYINYLSYINNGSLTLPIKD-------LPLLELQDLPTFVTPTGSHL 178
Query: 193 AVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTWSLRTIGPTIPSFYLDKQIED 252
A M+++ QF N DKAD+VL N+F++L+ V E L K + TIGPT+PS YLD+QI+
Sbjct: 179 AYFEMVLQ-QFTNFDKADFVLVNSFHDLDLHVKELLSKVCPVLTIGPTVPSMYLDQQIKS 237
Query: 253 DKDYGFSMFKSSTEA-CMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFL 311
D DY ++F A C WL+ R + SVVY+++GS +L +E+MEE+A + S+ +L
Sbjct: 238 DNDYDLNLFDLKEAALCTDWLDKRPEGSVVYIAFGSMAKLSSEQMEEIASAI--SNFSYL 295
Query: 312 WVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSL 371
WVVR SE++KLP F ET+ KSLV+ W PQL+VL+++A GCF+THCGWNSTME LSL
Sbjct: 296 WVVRASEESKLPPGFL-ETVDKDKSLVLKWSPQLQVLSNKAIGCFMTHCGWNSTMEGLSL 354
Query: 372 GVPMVAMPQWSDQSTNAKYILDVWKTGLKFP------IVKRDAIADCISEILEGERGKEL 425
GVPMVAMPQW+DQ NAKYI DVWK G++ I KR+ I I E++EGE+ KE+
Sbjct: 355 GVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKAEKESGICKREEIEFSIKEVMEGEKSKEM 414
Query: 426 RRNAGKWRKLAKEAVAKGGSSDSNIDEFVASL 457
+ NAGKWR LA +++++GGS+D NI+EFV+ +
Sbjct: 415 KENAGKWRDLAVKSLSEGGSTDININEFVSKI 446
|
|
| TAIR|locus:2031983 UGT74E2 "AT1G05680" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1117 (398.3 bits), Expect = 3.2e-113, P = 3.2e-113
Identities = 221/455 (48%), Positives = 304/455 (66%)
Query: 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDXXXXXIPLEAISDG 73
+H +VL +PGQGHI P+ QF +RL KG+K+TLV ++ I + IS+G
Sbjct: 5 SHLIVLPFPGQGHITPMSQFCKRLASKGLKLTLVLVSDKPSPPYK-TEHDSITVFPISNG 63
Query: 74 YDEGGYAQAESIEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKF 133
+ EG + ++ Y+ER TL +LVE M S +P IVYDS + W LDVA +
Sbjct: 64 FQEGE-EPLQDLDDYMERVETSIKNTLPKLVEDMKLSGNPPRAIVYDSTMPWLLDVAHSY 122
Query: 134 GLLGAPFLTQSCAVDYIYYHVKKGSLELPLT--GNEIL--LPGMPPLEPQDMPSFIHDLG 189
GL GA F TQ V IYYHV KGS +P T G+ L P P L D+PSF+ +
Sbjct: 123 GLSGAVFFTQPWLVTAIYYHVFKGSFSVPSTKYGHSTLASFPSFPMLTANDLPSFLCESS 182
Query: 190 SYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTWSLRTIGPTIPSFYLDKQ 249
SYP + +++ Q NID+ D VLCNTF +LEE++++W++ W + IGPT+PS YLDK+
Sbjct: 183 SYPNILRIVVD-QLSNIDRVDIVLCNTFDKLEEKLLKWVQSLWPVLNIGPTVPSMYLDKR 241
Query: 250 IEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQH 309
+ +DK+YGFS+F + CM+WLN + SVVY+S+GS V LK ++M ELA GLK S +
Sbjct: 242 LSEDKNYGFSLFNAKVAECMEWLNSKEPNSVVYLSFGSLVILKEDQMLELAAGLKQSGRF 301
Query: 310 FLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEAL 369
FLWVVRE+E KLP+ + +E K L+VSW PQL+VLAH++ GCF+THCGWNST+E L
Sbjct: 302 FLWVVRETETHKLPRNYVEEI--GEKGLIVSWSPQLDVLAHKSIGCFLTHCGWNSTLEGL 359
Query: 370 SLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP-----IVKRDAIADCISEILEGERGKE 424
SLGVPM+ MP W+DQ TNAK++ DVWK G++ V+R+ I + E++EGE+GKE
Sbjct: 360 SLGVPMIGMPHWTDQPTNAKFMQDVWKVGVRVKAEGDGFVRREEIMRSVEEVMEGEKGKE 419
Query: 425 LRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLAC 459
+R+NA KW+ LA+EAV++GGSSD +I+EFV S+ C
Sbjct: 420 IRKNAEKWKVLAQEAVSEGGSSDKSINEFV-SMFC 453
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| TAIR|locus:2045268 AT2G31790 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1010 (360.6 bits), Expect = 6.9e-102, P = 6.9e-102
Identities = 196/459 (42%), Positives = 288/459 (62%)
Query: 9 TSCKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDXXXXXIPLE 68
+ K H L YP QGHINP++Q ++RL KGI TL+ ++ + I +
Sbjct: 2 SEAKKGHVLFFPYPLQGHINPMIQLAKRLSKKGITSTLIIASKDHREPYTSDDYS-ITVH 60
Query: 69 AISDGYDEGGYAQAESIEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALD 128
I DG+ + A+ ++ L+RF ++LT+ + SD+P ++YD + +ALD
Sbjct: 61 TIHDGFFPHEHPHAKFVD--LDRFHNSTSRSLTDFISSAKLSDNPPKALIYDPFMPFALD 118
Query: 129 VAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNE----ILLPGMPPLEPQDMPSF 184
+AK L + TQ +YYH+ +G+ ++P+ +E PG P L D+PSF
Sbjct: 119 IAKDLDLYVVAYFTQPWLASLVYYHINEGTYDVPVDRHENPTLASFPGFPLLSQDDLPSF 178
Query: 185 IHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTWSLRTIGPTIPSF 244
+ GSYP + +++ QF N+ +AD +LCNTF +LE +VV+W+ W ++ IGP +PS
Sbjct: 179 ACEKGSYPLLHEFVVR-QFSNLLQADCILCNTFDQLEPKVVKWMNDQWPVKNIGPVVPSK 237
Query: 245 YLDKQIEDDKDYGFSMFKSST-EACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGL 303
+LD ++ +DKDY K+ E+ +KWL +R +SVVYV++G+ V L ++M+E+A +
Sbjct: 238 FLDNRLPEDKDYELENSKTEPDESVLKWLGNRPAKSVVYVAFGTLVALSEKQMKEIAMAI 297
Query: 304 KSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWN 363
+ HFLW VRESE++KLP F +E LV W PQLEVLAHE+ GCFV+HCGWN
Sbjct: 298 SQTGYHFLWSVRESERSKLPSGFIEEAEEKDSGLVAKWVPQLEVLAHESIGCFVSHCGWN 357
Query: 364 STMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP-----IVKRDAIADCISEILE 418
ST+EAL LGVPMV +PQW+DQ TNAK+I DVWK G++ + ++ IA CI E++E
Sbjct: 358 STLEALCLGVPMVGVPQWTDQPTNAKFIEDVWKIGVRVRTDGEGLSSKEEIARCIVEVME 417
Query: 419 GERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASL 457
GERGKE+R+N K + LA+EA+++GGSSD IDEFVA L
Sbjct: 418 GERGKEIRKNVEKLKVLAREAISEGGSSDKKIDEFVALL 456
|
|
| TAIR|locus:2045238 UGT74D1 "UDP-glucosyl transferase 74D1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 989 (353.2 bits), Expect = 1.2e-99, P = 1.2e-99
Identities = 198/457 (43%), Positives = 292/457 (63%)
Query: 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDXXX---XXIPLE-- 68
A+ LV ++P QGHINPLLQFS+RL K + VT +TT + S+ R +PL
Sbjct: 7 ANVLVFSFPIQGHINPLLQFSKRLLSKNVNVTFLTTSSTHNSILRRAITGGATALPLSFV 66
Query: 69 AISDGYDEGGYAQAESIEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALD 128
I DG++E + ++ Y +F + ++L+EL+ M D + +VYDS L + LD
Sbjct: 67 PIDDGFEED-HPSTDTSPDYFAKFQENVSRSLSELISSM---DPKPNAVVYDSCLPYVLD 122
Query: 129 VAKKF-GLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNEILLPGMPPLEPQDMPSFIHD 187
V +K G+ A F TQS V+ Y H +G E N+++LP MPPL+ D+P F++D
Sbjct: 123 VCRKHPGVAAASFFTQSSTVNATYIHFLRG--EFKEFQNDVVLPAMPPLKGNDLPVFLYD 180
Query: 188 LGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTWSLRTIGPTIPSFYLD 247
+ + ++ QF N+D D+ L N+F ELE EV++W++ W ++ IGP IPS YLD
Sbjct: 181 -NNLCRPLFELISSQFVNVDDIDFFLVNSFDELEVEVLQWMKNQWPVKNIGPMIPSMYLD 239
Query: 248 KQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSD 307
K++ DKDYG ++F + C+ WL+ + SV+YVS+GS LK ++M E+A GLK +
Sbjct: 240 KRLAGDKDYGINLFNAQVNECLDWLDSKPPGSVIYVSFGSLAVLKDDQMIEVAAGLKQTG 299
Query: 308 QHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTME 367
+FLWVVRE+E KLP + ++ K L+V+W PQL+VLAH++ GCF+THCGWNST+E
Sbjct: 300 HNFLWVVRETETKKLPSNYIEDICD--KGLIVNWSPQLQVLAHKSIGCFMTHCGWNSTLE 357
Query: 368 ALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP-----IVKRDAIADCISEILE--GE 420
ALSLGV ++ MP +SDQ TNAK+I DVWK G++ V ++ I C+ E++E E
Sbjct: 358 ALSLGVALIGMPAYSDQPTNAKFIEDVWKVGVRVKADQNGFVPKEEIVRCVGEVMEDMSE 417
Query: 421 RGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASL 457
+GKE+R+NA + + A+EA++ GG+SD NIDEFVA +
Sbjct: 418 KGKEIRKNARRLMEFAREALSDGGNSDKNIDEFVAKI 454
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| TAIR|locus:2032387 UGT74B1 "UDP-glucosyl transferase 74B1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 945 (337.7 bits), Expect = 5.3e-95, P = 5.3e-95
Identities = 193/456 (42%), Positives = 282/456 (61%)
Query: 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDXXXXXIPLEAISDGY 74
H ++L YP QGH+NP++QF++RL K +KVT+ TT + S+ + +E ISDG+
Sbjct: 11 HVVILPYPVQGHLNPMVQFAKRLVSKNVKVTIATTTYTASSI----TTPSLSVEPISDGF 66
Query: 75 DEGGYA-QAESIEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKF 133
D S++ Y E F G +TLT L+EK +DSP+DC++YDS L W L+VA+
Sbjct: 67 DFIPIGIPGFSVDTYSESFKLNGSETLTLLIEKFKSTDSPIDCLIYDSFLPWGLEVARSM 126
Query: 134 GLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNE--ILLPGMPPLEPQDMPSFI--HDLG 189
L A F T + V + G LP N + G+P L ++PSF+ H L
Sbjct: 127 ELSAASFFTNNLTVCSVLRKFSNGDFPLPADPNSAPFRIRGLPSLSYDELPSFVGRHWL- 185
Query: 190 SYPAVSYMMMKFQFENIDKADWVLCNTFYELEE--EVVEWLRKTWSLRTIGPTIPSFYLD 247
++P +++ QF N + ADW+ N F LEE + IGP IPS YLD
Sbjct: 186 THPEHGRVLLN-QFPNHENADWLFVNGFEGLEETQDCENGESDAMKATLIGPMIPSAYLD 244
Query: 248 KQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSD 307
++EDDKDYG S+ K ++ CM+WL + +SV +VS+GSF L +++ E+A L+ SD
Sbjct: 245 DRMEDDKDYGASLLKPISKECMEWLETKQAQSVAFVSFGSFGILFEKQLAEVAIALQESD 304
Query: 308 QHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTME 367
+FLWV++E+ AKLP+ F + T ++L+VSWC QLEVLAHE+ GCF+THCGWNST+E
Sbjct: 305 LNFLWVIKEAHIAKLPEGFVEST--KDRALLVSWCNQLEVLAHESIGCFLTHCGWNSTLE 362
Query: 368 ALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP------IVKRDAIADCISEILEGER 421
LSLGVPMV +PQWSDQ +AK++ +VWK G + IVK + + C+ ++EGE
Sbjct: 363 GLSLGVPMVGVPQWSDQMNDAKFVEEVWKVGYRAKEEAGEVIVKSEELVRCLKGVMEGES 422
Query: 422 GKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASL 457
++R ++ KW+ LA +A+++GGSSD +I+EF+ SL
Sbjct: 423 SVKIRESSKKWKDLAVKAMSEGGSSDRSINEFIESL 458
|
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| TAIR|locus:2130205 UGT84A1 "AT4G15480" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 779 (279.3 bits), Expect = 2.1e-77, P = 2.1e-77
Identities = 169/469 (36%), Positives = 272/469 (57%)
Query: 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDXXXXXIPLEAISDG- 73
H +++++ GQGH+NPLL+ + + KG+ VT VTT + K + + L+ + G
Sbjct: 19 HVMLVSFQGQGHVNPLLRLGKLIASKGLLVTFVTTELWGKKMRQANKIVDGELKPVGSGS 78
Query: 74 -----YDEGGYAQAESIEA----YLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILL 124
+DE +A+ + A Y+ +G + +++LV + ++ PV C++ + +
Sbjct: 79 IRFEFFDEE-WAEDDDRRADFSLYIAHLESVGIREVSKLVRRYEEANEPVSCLINNPFIP 137
Query: 125 WALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGN---EILLPGMPPLEPQDM 181
W VA++F + A QSCA YYH + GS+ P ++ LP +P L+ ++
Sbjct: 138 WVCHVAEEFNIPCAVLWVQSCACFSAYYHYQDGSVSFPTETEPELDVKLPCVPVLKNDEI 197
Query: 182 PSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTWSLRTIGPTI 241
PSF+H + ++ QF+N+ K+ VL ++F LE+EV++++ ++T+GP
Sbjct: 198 PSFLHPSSRFTGFRQAILG-QFKNLSKSFCVLIDSFDSLEQEVIDYMSSLCPVKTVGPL- 255
Query: 242 PSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAW 301
F + + + D G + KS T+ C++WL+ R K SVVY+S+G+ LK E++EE+A
Sbjct: 256 --FKVARTVTSDVS-G-DICKS-TDKCLEWLDSRPKSSVVYISFGTVAYLKQEQIEEIAH 310
Query: 302 GLKSSDQHFLWVVR------ESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGC 355
G+ S FLWV+R + E LP++ E+ K ++V WCPQ +VL+H + C
Sbjct: 311 GVLKSGLSFLWVIRPPPHDLKVETHVLPQELK-ESSAKGKGMIVDWCPQEQVLSHPSVAC 369
Query: 356 FVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP-------IVKRDA 408
FVTHCGWNSTME+LS GVP+V PQW DQ T+A Y++DV+KTG++ +V R+
Sbjct: 370 FVTHCGWNSTMESLSSGVPVVCCPQWGDQVTDAVYLIDVFKTGVRLGRGATEERVVPREE 429
Query: 409 IADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASL 457
+A+ + E GE+ +ELR+NA KW+ A+ AVA GGSSD N EFV L
Sbjct: 430 VAEKLLEATVGEKAEELRKNALKWKAEAEAAVAPGGSSDKNFREFVEKL 478
|
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| TAIR|locus:2089880 UGT84A2 "UDP-glucosyl transferase 84A2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 721 (258.9 bits), Expect = 2.9e-71, P = 2.9e-71
Identities = 160/465 (34%), Positives = 259/465 (55%)
Query: 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDXXXXXIPLEAISDGY 74
H +++++PGQGH+NPLL+ + L KG+ +T VTT + K + L+ + GY
Sbjct: 12 HVMLVSFPGQGHVNPLLRLGKLLASKGLLITFVTTESWGKKMRISNKIQDRVLKPVGKGY 71
Query: 75 ------DEG----GYAQAESIEAYLERFWQIGPQTLTELVEKMNG-SDSPVDCIVYDSIL 123
D+G A ++ +G + + LV++ + PV C++ + +
Sbjct: 72 LRYDFFDDGLPEDDEASRTNLTILRPHLELVGKREIKNLVKRYKEVTKQPVTCLINNPFV 131
Query: 124 LWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPL-TGNEI--LLPGMPPLEPQD 180
W DVA+ + A QSCA YY+ ++ P T EI + GMP L+ +
Sbjct: 132 SWVCDVAEDLQIPCAVLWVQSCACLAAYYYYHHNLVDFPTKTEPEIDVQISGMPLLKHDE 191
Query: 181 MPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTWSLR-TIGP 239
+PSFIH + A+ +++ Q + + K + +TF LE+++++ + T SL I P
Sbjct: 192 IPSFIHPSSPHSALREVIID-QIKRLHKTFSIFIDTFNSLEKDIIDHM-STLSLPGVIRP 249
Query: 240 TIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEEL 299
P + + K + D T+ CM+WL+ + SVVY+S+G+ LK E+++E+
Sbjct: 250 LGPLYKMAKTVA--YDVVKVNISEPTDPCMEWLDSQPVSSVVYISFGTVAYLKQEQIDEI 307
Query: 300 AWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTH 359
A+G+ ++D FLWV+R+ E +K K +V WC Q +VL+H + CFVTH
Sbjct: 308 AYGVLNADVTFLWVIRQQELGFNKEKHVLPEEVKGKGKIVEWCSQEKVLSHPSVACFVTH 367
Query: 360 CGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP-------IVKRDAIADC 412
CGWNSTMEA+S GVP V PQW DQ T+A Y++DVWKTG++ +V R+ +A+
Sbjct: 368 CGWNSTMEAVSSGVPTVCFPQWGDQVTDAVYMIDVWKTGVRLSRGEAEERLVPREEVAER 427
Query: 413 ISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASL 457
+ E+ +GE+ EL++NA KW++ A+ AVA+GGSSD N+++FV L
Sbjct: 428 LREVTKGEKAIELKKNALKWKEEAEAAVARGGSSDRNLEKFVEKL 472
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| TAIR|locus:2130215 UGT84A3 "AT4G15490" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 714 (256.4 bits), Expect = 1.6e-70, P = 1.6e-70
Identities = 170/468 (36%), Positives = 255/468 (54%)
Query: 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTT-RFFYKSLHR-----DXXXXXIPL- 67
H +++++PGQGH+NPLL+ + + KG+ VT VTT + + K + + D + L
Sbjct: 8 HVMLVSFPGQGHVNPLLRLGKLIASKGLLVTFVTTEKPWGKKMRQANKIQDGVLKPVGLG 67
Query: 68 ----EAISDGYDEGGYAQAESIEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSIL 123
E SDG+ + + + +A+ +G Q + LV++ N PV C++ ++ +
Sbjct: 68 FIRFEFFSDGFADDDEKRFD-FDAFRPHLEAVGKQEIKNLVKRYN--KEPVTCLINNAFV 124
Query: 124 LWALDVAKKFGLLGAPFLTQSCA--VDYIYYH---VKKGSLELPLTGNEILLPGMPPLEP 178
W DVA++ + A QSCA Y YYH VK + P EI P +P L+
Sbjct: 125 PWVCDVAEELHIPSAVLWVQSCACLTAYYYYHHRLVKFPTKTEPDISVEI--PCLPLLKH 182
Query: 179 QDMPSFIHDLGSYPAVSYMMMKF--QFENIDKADWVLCNTFYELEEEVVEWLRKTWSLRT 236
++PSF+H Y A +++ +FEN K+ ++ +TF ELE+++++ + +
Sbjct: 183 DEIPSFLHPSSPYTAFGDIILDQLKRFEN-HKSFYLFIDTFRELEKDIMDHMSQLCPQAI 241
Query: 237 IGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEM 296
I P P F + + + D S S CM+WL+ R SVVY+S+G+ LK E+M
Sbjct: 242 ISPVGPLFKMAQTLSSDVKGDISEPASD---CMEWLDSREPSSVVYISFGTIANLKQEQM 298
Query: 297 EELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCF 356
EE+A G+ SS LWVVR + + K +V WCPQ VLAH A CF
Sbjct: 299 EEIAHGVLSSGLSVLWVVRPPMEGTFVEPHVLPRELEEKGKIVEWCPQERVLAHPAIACF 358
Query: 357 VTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP-------IVKRDAI 409
++HCGWNSTMEAL+ GVP+V PQW DQ T+A Y+ DV+KTG++ IV R+ +
Sbjct: 359 LSHCGWNSTMEALTAGVPVVCFPQWGDQVTDAVYLADVFKTGVRLGRGAAEEMIVSREVV 418
Query: 410 ADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASL 457
A+ + E GE+ ELR NA +W+ A+ AVA GGSSD N EFV L
Sbjct: 419 AEKLLEATVGEKAVELRENARRWKAEAEAAVADGGSSDMNFKEFVDKL 466
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| TAIR|locus:2009557 UGT85A1 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 550 (198.7 bits), Expect = 3.7e-70, Sum P(2) = 3.7e-70
Identities = 127/375 (33%), Positives = 212/375 (56%)
Query: 113 PVDCIVYDSILLWALDVAKKFGLLGAPFLTQS-CA-VDYIYYH--VKKGSLELP----LT 164
PV CIV D + + LDVA++ G+ F T S CA + Y++++ ++KG L LT
Sbjct: 119 PVSCIVSDGCMSFTLDVAEELGVPEVLFWTTSGCAFLAYLHFYLFIEKGLCPLKDESYLT 178
Query: 165 GNEI------LLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFY 218
+ +P M ++ +D+PSFI + ++ + E +A ++ NTF
Sbjct: 179 KEYLEDTVIDFIPTMKNVKLKDIPSFIRTTNPDDVMISFALR-ETERAKRASAIILNTFD 237
Query: 219 ELEEEVVEWLRKTWS-LRTIGPTIPSFYLDKQIEDDKDYGF---SMFKSSTEACMKWLND 274
+LE +VV ++ + ++GP +++IE+ + G +++K E C+ WL+
Sbjct: 238 DLEHDVVHAMQSILPPVYSVGPL--HLLANREIEEGSEIGMMSSNLWKEEME-CLDWLDT 294
Query: 275 RAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRES----EQAKLPKKFSDET 330
+ + SV+Y+++GS L +++ E AWGL S + FLWV+R E+A +P F ET
Sbjct: 295 KTQNSVIYINFGSITVLSVKQLVEFAWGLAGSGKEFLWVIRPDLVAGEEAMVPPDFLMET 354
Query: 331 LTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKY 390
+S++ SWCPQ +VL+H A G F+THCGWNS +E+LS GVPMV P ++DQ N K+
Sbjct: 355 --KDRSMLASWCPQEKVLSHPAIGGFLTHCGWNSILESLSCGVPMVCWPFFADQQMNCKF 412
Query: 391 ILDVWKTGLKFP-IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVA-KGGSSDS 448
D W G++ VKR+ + + E+++GE+GK++R A +W++LA++A K GSS
Sbjct: 413 CCDEWDVGIEIGGDVKREEVEAVVRELMDGEKGKKMREKAVEWQRLAEKATEHKLGSSVM 472
Query: 449 NIDEFVASLACSKNS 463
N + V+ + S
Sbjct: 473 NFETVVSKFLLGQKS 487
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| O22820 | U74F1_ARATH | 2, ., 4, ., 1, ., - | 0.4900 | 0.9310 | 0.9621 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.4.1 | 0.921 |
| 4th Layer | 2.4.1.121 | LOW CONFIDENCE prediction! |
| 4th Layer | 2.4.1.195 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | fgenesh4_pm.C_LG_XIV000523 | hypothetical protein (459 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 464 | |||
| PLN02173 | 449 | PLN02173, PLN02173, UDP-glucosyl transferase famil | 1e-166 | |
| PLN02555 | 480 | PLN02555, PLN02555, limonoid glucosyltransferase | 1e-120 | |
| PLN02448 | 459 | PLN02448, PLN02448, UDP-glycosyltransferase family | 5e-90 | |
| PLN02152 | 455 | PLN02152, PLN02152, indole-3-acetate beta-glucosyl | 7e-90 | |
| PLN02210 | 456 | PLN02210, PLN02210, UDP-glucosyl transferase | 2e-75 | |
| PLN02410 | 451 | PLN02410, PLN02410, UDP-glucoronosyl/UDP-glucosyl | 6e-58 | |
| PLN03007 | 482 | PLN03007, PLN03007, UDP-glucosyltransferase family | 1e-51 | |
| PLN02562 | 448 | PLN02562, PLN02562, UDP-glycosyltransferase | 1e-50 | |
| PLN02534 | 491 | PLN02534, PLN02534, UDP-glycosyltransferase | 5e-49 | |
| PLN02863 | 477 | PLN02863, PLN02863, UDP-glucoronosyl/UDP-glucosyl | 5e-47 | |
| PLN02207 | 468 | PLN02207, PLN02207, UDP-glycosyltransferase | 1e-40 | |
| PLN02167 | 475 | PLN02167, PLN02167, UDP-glycosyltransferase family | 4e-40 | |
| PLN00164 | 480 | PLN00164, PLN00164, glucosyltransferase; Provision | 1e-38 | |
| PLN02992 | 481 | PLN02992, PLN02992, coniferyl-alcohol glucosyltran | 3e-37 | |
| PLN03004 | 451 | PLN03004, PLN03004, UDP-glycosyltransferase | 8e-37 | |
| PLN02554 | 481 | PLN02554, PLN02554, UDP-glycosyltransferase family | 4e-35 | |
| PLN02670 | 472 | PLN02670, PLN02670, transferase, transferring glyc | 2e-34 | |
| PLN03015 | 470 | PLN03015, PLN03015, UDP-glucosyl transferase | 1e-33 | |
| cd03784 | 401 | cd03784, GT1_Gtf_like, This family includes the Gt | 1e-29 | |
| pfam00201 | 500 | pfam00201, UDPGT, UDP-glucoronosyl and UDP-glucosy | 3e-24 | |
| PLN02764 | 453 | PLN02764, PLN02764, glycosyltransferase family pro | 3e-21 | |
| TIGR01426 | 392 | TIGR01426, MGT, glycosyltransferase, MGT family | 5e-20 | |
| COG1819 | 406 | COG1819, COG1819, Glycosyl transferases, related t | 5e-19 | |
| PLN02208 | 442 | PLN02208, PLN02208, glycosyltransferase family pro | 1e-18 | |
| PLN00414 | 446 | PLN00414, PLN00414, glycosyltransferase family pro | 3e-16 | |
| PHA03392 | 507 | PHA03392, egt, ecdysteroid UDP-glucosyltransferase | 5e-13 | |
| cd03801 | 374 | cd03801, GT1_YqgM_like, This family is most closel | 8e-04 |
| >gnl|CDD|177830 PLN02173, PLN02173, UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Score = 476 bits (1227), Expect = e-166
Identities = 221/452 (48%), Positives = 308/452 (68%), Gaps = 21/452 (4%)
Query: 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGY 74
H L + +P QGHI P+ QF +RL KG K T T F + ++H D SS I + ISDGY
Sbjct: 7 HVLAVPFPSQGHITPIRQFCKRLHSKGFKTTHTLTTFIFNTIHLDPSSP-ISIATISDGY 65
Query: 75 DEGGYAQAESIEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFG 134
D+GG++ A S+ YL+ F G +T+ +++ K +D+P+ CIVYDS + WALD+A++FG
Sbjct: 66 DQGGFSSAGSVPEYLQNFKTFGSKTVADIIRKHQSTDNPITCIVYDSFMPWALDLAREFG 125
Query: 135 LLGAPFLTQSCAVDYIYY--HVKKGSLELPLTGNEILLPGMPPLEPQDMPSFIHDLGSYP 192
L APF TQSCAV+YI Y ++ GSL LP+ +P LE QD+P+F+ GS+
Sbjct: 126 LAAAPFFTQSCAVNYINYLSYINNGSLTLPIKD-------LPLLELQDLPTFVTPTGSHL 178
Query: 193 AVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTWSLRTIGPTIPSFYLDKQIED 252
A M+++ QF N DKAD+VL N+F++L+ E L K + TIGPT+PS YLD+QI+
Sbjct: 179 AYFEMVLQ-QFTNFDKADFVLVNSFHDLDLHENELLSKVCPVLTIGPTVPSMYLDQQIKS 237
Query: 253 DKDYGFSMFKSSTEA-CMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFL 311
D DY ++F A C WL+ R + SVVY+++GS +L +E+MEE+A + S+ +L
Sbjct: 238 DNDYDLNLFDLKEAALCTDWLDKRPQGSVVYIAFGSMAKLSSEQMEEIASAI--SNFSYL 295
Query: 312 WVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSL 371
WVVR SE++KLP F ET+ KSLV+ W PQL+VL+++A GCF+THCGWNSTME LSL
Sbjct: 296 WVVRASEESKLPPGFL-ETVDKDKSLVLKWSPQLQVLSNKAIGCFMTHCGWNSTMEGLSL 354
Query: 372 GVPMVAMPQWSDQSTNAKYILDVWKTGLKFP------IVKRDAIADCISEILEGERGKEL 425
GVPMVAMPQW+DQ NAKYI DVWK G++ I KR+ I I E++EGE+ KE+
Sbjct: 355 GVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKAEKESGIAKREEIEFSIKEVMEGEKSKEM 414
Query: 426 RRNAGKWRKLAKEAVAKGGSSDSNIDEFVASL 457
+ NAGKWR LA +++++GGS+D NI+ FV+ +
Sbjct: 415 KENAGKWRDLAVKSLSEGGSTDININTFVSKI 446
|
Length = 449 |
| >gnl|CDD|178170 PLN02555, PLN02555, limonoid glucosyltransferase | Back alignment and domain information |
|---|
Score = 358 bits (920), Expect = e-120
Identities = 173/471 (36%), Positives = 273/471 (57%), Gaps = 34/471 (7%)
Query: 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAIS 71
L H +++++PGQGH+NPLL+ + L KG+ VT VTT + K + + + L+ +
Sbjct: 6 SLVHVMLVSFPGQGHVNPLLRLGKLLASKGLLVTFVTTESWGKKMRQANKIQDGVLKPVG 65
Query: 72 DGYD-----EGGYAQAE----SIEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSI 122
DG+ E G+A+ + ++ YL + +G + + LV++ PV C++ +
Sbjct: 66 DGFIRFEFFEDGWAEDDPRRQDLDLYLPQLELVGKREIPNLVKRYAEQGRPVSCLINNPF 125
Query: 123 LLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGN---EILLPGMPPLEPQ 179
+ W DVA++ G+ A QSCA YYH G + P ++ LP MP L+
Sbjct: 126 IPWVCDVAEELGIPSAVLWVQSCACFSAYYHYYHGLVPFPTETEPEIDVQLPCMPLLKYD 185
Query: 180 DMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTWSLRTIGP 239
++PSF+H YP + ++ Q++N+DK +L +TF ELE+E+++++ K ++ +GP
Sbjct: 186 EIPSFLHPSSPYPFLRRAILG-QYKNLDKPFCILIDTFQELEKEIIDYMSKLCPIKPVGP 244
Query: 240 TIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEEL 299
F + K D S + C++WL+ + SVVY+S+G+ V LK E+++E+
Sbjct: 245 L---FKMAKTPNSDVKGDIS---KPADDCIEWLDSKPPSSVVYISFGTVVYLKQEQIDEI 298
Query: 300 AWGLKSSDQHFLWVVRES------EQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEAT 353
A+G+ +S FLWV+R E LP++F K +V WCPQ +VLAH +
Sbjct: 299 AYGVLNSGVSFLWVMRPPHKDSGVEPHVLPEEF--LEKAGDKGKIVQWCPQEKVLAHPSV 356
Query: 354 GCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKF-------PIVKR 406
CFVTHCGWNSTMEALS GVP+V PQW DQ T+A Y++DV+KTG++ ++ R
Sbjct: 357 ACFVTHCGWNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLCRGEAENKLITR 416
Query: 407 DAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASL 457
+ +A+C+ E GE+ EL++NA KW++ A+ AVA+GGSSD N EFV L
Sbjct: 417 EEVAECLLEATVGEKAAELKQNALKWKEEAEAAVAEGGSSDRNFQEFVDKL 467
|
Length = 480 |
| >gnl|CDD|215247 PLN02448, PLN02448, UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Score = 281 bits (720), Expect = 5e-90
Identities = 150/485 (30%), Positives = 235/485 (48%), Gaps = 64/485 (13%)
Query: 1 MENNGKKPTSCKLAHCLVLTYPGQGHINPLLQFSRRLQHK--GIKVTLVTTRFFYKSLHR 58
TSC H + + YPG+GHINP++ + L + I +T V T + +
Sbjct: 1 DAVGSSPTTSC---HVVAMPYPGRGHINPMMNLCKLLASRKPDILITFVVTEEWLGLIGS 57
Query: 59 DSSSSSIPLEAISD--------GYDEGGYAQAES--IEAYLERFWQIGPQTLTELVEKMN 108
D +I I + D G+ +A +EA E+ ++
Sbjct: 58 DPKPDNIRFATIPNVIPSELVRAADFPGFLEAVMTKMEAPFEQL--------------LD 103
Query: 109 GSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYH------VKKGSLELP 162
+ PV IV D+ L WA+ V + + A T S ++YH +EL
Sbjct: 104 RLEPPVTAIVADTYLFWAVGVGNRRNIPVASLWTMSATFFSVFYHFDLLPQNGHFPVELS 163
Query: 163 LTGNEIL--LPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYEL 220
+G E + +PG+ D+P H S + + F + KA ++L +FYEL
Sbjct: 164 ESGEERVDYIPGLSSTRLSDLPPIFHG-NSRRVLK--RILEAFSWVPKAQYLLFTSFYEL 220
Query: 221 EEEVVEWLRKTWSL--RTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKE 278
E + ++ L+ + IGP+IP L + S + + +WL+ + +
Sbjct: 221 EAQAIDALKSKFPFPVYPIGPSIPYMELKD------NSSSSNNEDNEPDYFQWLDSQPEG 274
Query: 279 SVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLV 338
SV+YVS GSF+ + + +M+E+A GL+ S FLWV R E ++L + D LV
Sbjct: 275 SVLYVSLGSFLSVSSAQMDEIAAGLRDSGVRFLWVARG-EASRLKEICGD------MGLV 327
Query: 339 VSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTG 398
V WC QL+VL H + G F THCGWNST+EA+ GVPM+ P + DQ N+K I++ WK G
Sbjct: 328 VPWCDQLKVLCHSSVGGFWTHCGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIG 387
Query: 399 LKFP-------IVKRDAIADCISEI--LEGERGKELRRNAGKWRKLAKEAVAKGGSSDSN 449
+ +V R+ IA+ + LE E GKE+RR A + +++ + A+AKGGSSD+N
Sbjct: 388 WRVKREVGEETLVGREEIAELVKRFMDLESEEGKEMRRRAKELQEICRGAIAKGGSSDTN 447
Query: 450 IDEFV 454
+D F+
Sbjct: 448 LDAFI 452
|
Length = 459 |
| >gnl|CDD|177813 PLN02152, PLN02152, indole-3-acetate beta-glucosyltransferase | Back alignment and domain information |
|---|
Score = 280 bits (718), Expect = 7e-90
Identities = 165/466 (35%), Positives = 257/466 (55%), Gaps = 39/466 (8%)
Query: 15 HCLVLTYPGQGHINPLLQFSRRL-QHKGIKVTLVT-TRFFYKSLHRDSSS-SSIPLEAIS 71
H L++T+P QGH+NP L+F+RRL + G +VT T ++S+ + ++ ++ S
Sbjct: 5 HFLLVTFPAQGHVNPSLRFARRLIKTTGTRVTFATCLSVIHRSMIPNHNNVENLSFLTFS 64
Query: 72 DGYDEGGYAQAESIEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAK 131
DG+D+G + + ++ L F + G + L++ +E DSPV C++Y + WA VA+
Sbjct: 65 DGFDDGVISNTDDVQNRLVNFERNGDKALSDFIEANLNGDSPVTCLIYTILPNWAPKVAR 124
Query: 132 KFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNEIL-LPGMPPLEPQDMPSFIH---- 186
+F L Q V IYY+ G+ N + P +P LE +D+PSF+
Sbjct: 125 RFHLPSVLLWIQPAFVFDIYYNYSTGN-------NSVFEFPNLPSLEIRDLPSFLSPSNT 177
Query: 187 DLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTWSLRTIGPTIPSFYL 246
+ + AV +M+F E + +L NTF LE E + + + +GP +P+
Sbjct: 178 NKAAQ-AVYQELMEFLKEESNPK--ILVNTFDSLEPEFLTAIPNI-EMVAVGPLLPAEIF 233
Query: 247 DKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSS 306
E KD SS WL+ + + SV+YVS+G+ VEL +++EELA L
Sbjct: 234 TGS-ESGKDLSVRDQSSSYTL---WLDSKTESSVIYVSFGTMVELSKKQIEELARALIEG 289
Query: 307 DQHFLWVV-----RES-----EQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCF 356
+ FLWV+ RE+ E+ ++ K ++VSWC Q+EVL H A GCF
Sbjct: 290 KRPFLWVITDKLNREAKIEGEEETEIEKIAGFRHELEEVGMIVSWCSQIEVLRHRAVGCF 349
Query: 357 VTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP-----IVKRDAIAD 411
VTHCGW+S++E+L LGVP+VA P WSDQ NAK + ++WKTG++ +V+R I
Sbjct: 350 VTHCGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVRENSEGLVERGEIRR 409
Query: 412 CISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASL 457
C+ ++E E+ ELR +A KW++LA EA +GGSSD N++ FV +L
Sbjct: 410 CLEAVME-EKSVELRESAEKWKRLAIEAGGEGGSSDKNVEAFVKTL 454
|
Length = 455 |
| >gnl|CDD|215127 PLN02210, PLN02210, UDP-glucosyl transferase | Back alignment and domain information |
|---|
Score = 243 bits (621), Expect = 2e-75
Identities = 146/455 (32%), Positives = 237/455 (52%), Gaps = 23/455 (5%)
Query: 15 HCLVLTYPGQGHINPLLQFSR--RLQHKGIKVTLVTTRFFYKSLHR-DSSSSSIPLEAIS 71
H L++T QGHINP+L+ ++ L K + TL TT L + + L S
Sbjct: 10 HVLMVTLAFQGHINPMLKLAKHLSLSSKNLHFTLATTEQARDLLSTVEKPRRPVDLVFFS 69
Query: 72 DGYDEGGYAQAESIEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAK 131
DG + E++ L + +G + L++++E + CI+ W VA
Sbjct: 70 DGLPKDDPRAPETLLKSLNK---VGAKNLSKIIE-----EKRYSCIISSPFTPWVPAVAA 121
Query: 132 KFGLLGAPFLTQSCAVDYIYY--HVKKGSL-ELPLTGNEILLPGMPPLEPQDMPSFIHDL 188
+ A Q+C +YY ++K S +L + LP +P LE +D+PSF+ L
Sbjct: 122 AHNIPCAILWIQACGAYSVYYRYYMKTNSFPDLEDLNQTVELPALPLLEVRDLPSFM--L 179
Query: 189 GSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTWSLRTIGPTIPSFYLDK 248
S A +M + + WVL N+FYELE E++E + + IGP + F L
Sbjct: 180 PSGGAHFNNLMAEFADCLRYVKWVLVNSFYELESEIIESMADLKPVIPIGPLVSPFLLGD 239
Query: 249 QIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQ 308
E+ D S + CM+WL+ +A+ SVVY+S+GS +E ++E +A LK+
Sbjct: 240 DEEETLDGKNLDMCKSDDCCMEWLDKQARSSVVYISFGSMLESLENQVETIAKALKNRGV 299
Query: 309 HFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEA 368
FLWV+R E+A+ + E + + +V+ W PQ ++L+H A CFVTHCGWNST+E
Sbjct: 300 PFLWVIRPKEKAQNVQVLQ-EMVKEGQGVVLEWSPQEKILSHMAISCFVTHCGWNSTIET 358
Query: 369 LSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP------IVKRDAIADCISEILEGERG 422
+ GVP+VA P W+DQ +A+ ++DV+ G++ +K + + CI + EG
Sbjct: 359 VVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAVDGELKVEEVERCIEAVTEGPAA 418
Query: 423 KELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASL 457
++RR A + + +A+ A+A GGSS N+D F++ +
Sbjct: 419 ADIRRRAAELKHVARLALAPGGSSARNLDLFISDI 453
|
Length = 456 |
| >gnl|CDD|178032 PLN02410, PLN02410, UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Score = 197 bits (501), Expect = 6e-58
Identities = 143/464 (30%), Positives = 227/464 (48%), Gaps = 55/464 (11%)
Query: 17 LVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDE 76
+++ P QGHI+P++Q ++ L KG +T+ T+F Y S D + I + E
Sbjct: 11 VLVPVPAQGHISPMMQLAKTLHLKGFSITIAQTKFNYFSPSDD--FTDFQFVTIPESLPE 68
Query: 77 GGYAQAESIEAY--LERFWQIG-PQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKF 133
+ IE L + Q+ L +LV + + + C+VYD + +A AK+F
Sbjct: 69 SDFKNLGPIEFLHKLNKECQVSFKDCLGQLVLQQG---NEIACVVYDEFMYFAEAAAKEF 125
Query: 134 GLLGAPFLTQSC-------AVDYIYYHVKKGSLELPLTGNEILLPGMPPLEPQDMPSFIH 186
L F T S D +Y + L+ P L+P PL +D P
Sbjct: 126 KLPNVIFSTTSATAFVCRSVFDKLYANNVLAPLKEPKGQQNELVPEFHPLRCKDFPV--- 182
Query: 187 DLGSYPAVSYMMMKFQFENIDK--ADWVLCNTFYELEEEVVEWLRKTWSLRT--IGP--- 239
S+ A +M+ +DK A V+ NT LE + L++ + IGP
Sbjct: 183 ---SHWASLESIMELYRNTVDKRTASSVIINTASCLESSSLSRLQQQLQIPVYPIGPLHL 239
Query: 240 --TIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEME 297
+ P+ L++ ++C++WLN + K SV++VS GS ++ E+
Sbjct: 240 VASAPTSLLEEN----------------KSCIEWLNKQKKNSVIFVSLGSLALMEINEVM 283
Query: 298 ELAWGLKSSDQHFLWVVRESEQ------AKLPKKFSDETLTSHKSLVVSWCPQLEVLAHE 351
E A GL SS+Q FLWV+R LPK+FS + S + +V W PQ EVL+H
Sbjct: 284 ETASGLDSSNQQFLWVIRPGSVRGSEWIESLPKEFS--KIISGRGYIVKWAPQKEVLSHP 341
Query: 352 ATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP-IVKRDAIA 410
A G F +HCGWNST+E++ GVPM+ P SDQ NA+Y+ VWK G++ + R A+
Sbjct: 342 AVGGFWSHCGWNSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVEGDLDRGAVE 401
Query: 411 DCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFV 454
+ ++ E G+E+R+ A ++ + +V GGSS ++++EFV
Sbjct: 402 RAVKRLMVEEEGEEMRKRAISLKEQLRASVISGGSSHNSLEEFV 445
|
Length = 451 |
| >gnl|CDD|178584 PLN03007, PLN03007, UDP-glucosyltransferase family protein | Back alignment and domain information |
|---|
Score = 181 bits (460), Expect = 1e-51
Identities = 143/493 (29%), Positives = 234/493 (47%), Gaps = 63/493 (12%)
Query: 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTT----RFFYK---SLHRDSSSSSIPL 67
H L + GH+ P L ++ +G K T++TT + F K + + I +
Sbjct: 7 HILFFPFMAHGHMIPTLDMAKLFSSRGAKSTILTTPLNAKIFEKPIEAFKNLNPGLEIDI 66
Query: 68 E-----AISDGYDEG--------GYAQAESIEAYLERFWQIGPQTLTELVEKMNGSDSPV 114
+ + G EG +S + +L+ + + + +EK+ + P
Sbjct: 67 QIFNFPCVELGLPEGCENVDFITSNNNDDSGDLFLKFLFST--KYFKDQLEKLLETTRP- 123
Query: 115 DCIVYDSILLWALDVAKKFGLLGAPFLTQS----CAVDYIYYHVKKGSLELPLTGNEILL 170
DC+V D WA + A+KFG+ F CA I H K ++ + ++
Sbjct: 124 DCLVADMFFPWATEAAEKFGVPRLVFHGTGYFSLCASYCIRVH--KPQKKVASSSEPFVI 181
Query: 171 PGMPP----LEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVE 226
P +P E Q + MK E+ K+ VL N+FYELE +
Sbjct: 182 PDLPGDIVITEEQIN------DADEESPMGKFMKEVRESEVKSFGVLVNSFYELESAYAD 235
Query: 227 WLRKTWSLRT--IGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVS 284
+ + + R IGP S Y ++ E+ + G E C+KWL+ + +SV+Y+S
Sbjct: 236 FYKSFVAKRAWHIGPL--SLY-NRGFEEKAERGKKANIDEQE-CLKWLDSKKPDSVIYLS 291
Query: 285 YGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAK-----LPKKFSDETLTSHKSLVV 339
+GS K E++ E+A GL+ S Q+F+WVVR++E LP+ F E T K L++
Sbjct: 292 FGSVASFKNEQLFEIAAGLEGSGQNFIWVVRKNENQGEKEEWLPEGF--EERTKGKGLII 349
Query: 340 -SWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTG 398
W PQ+ +L H+ATG FVTHCGWNS +E ++ G+PMV P ++Q N K + V +TG
Sbjct: 350 RGWAPQVLILDHQATGGFVTHCGWNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTG 409
Query: 399 L----------KFPIVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDS 448
+ K + R+ + + E++ GE +E R A K ++AK AV +GGSS +
Sbjct: 410 VSVGAKKLVKVKGDFISREKVEKAVREVIVGEEAEERRLRAKKLAEMAKAAVEEGGSSFN 469
Query: 449 NIDEFVASLACSK 461
++++F+ L K
Sbjct: 470 DLNKFMEELNSRK 482
|
Length = 482 |
| >gnl|CDD|215305 PLN02562, PLN02562, UDP-glycosyltransferase | Back alignment and domain information |
|---|
Score = 177 bits (451), Expect = 1e-50
Identities = 136/477 (28%), Positives = 218/477 (45%), Gaps = 75/477 (15%)
Query: 17 LVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLH-RDSSSSSIPLEAISDGYD 75
+++ YP QGH+ P+L+ + +G + ++T F ++ + I +ISDG D
Sbjct: 10 ILVPYPAQGHVTPMLKLASAFLSRGFEPVVITPEFIHRRISATLDPKLGITFMSISDGQD 69
Query: 76 EGGYAQAESIEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGL 135
+ SIE +E P L L+ K++ D V C+V D + WA+ VA + G+
Sbjct: 70 DDPPRDFFSIENSME---NTMPPQLERLLHKLD-EDGEVACMVVDLLASWAIGVADRCGV 125
Query: 136 LGAPFLTQSCAVDYIYYHVKKGSLELPLTG------------NEILLPGMPPLEPQDMPS 183
A F A Y + + EL TG +LP P L +D+P
Sbjct: 126 PVAGFWPVMLAA----YRLIQAIPELVRTGLISETGCPRQLEKICVLPEQPLLSTEDLPW 181
Query: 184 FIHDLGSYPAVSYMMMKFQFENIDKAD---WVLCNTFYELEEEVVEWLRKTWS------L 234
I P KF +++ W+L N+F + E + V+ + +++ +
Sbjct: 182 LI----GTPKARKARFKFWTRTLERTKSLRWILMNSFKDEEYDDVKNHQASYNNGQNPQI 237
Query: 235 RTIGP---------TIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSY 285
IGP T PSF+ E+D +C+ WL ++ SV+Y+S+
Sbjct: 238 LQIGPLHNQEATTITKPSFW-----EEDM------------SCLGWLQEQKPNSVIYISF 280
Query: 286 GSFVELKAE-EMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQ 344
GS+V E + LA L++S + F+WV+ + LP + + S + VVSW PQ
Sbjct: 281 GSWVSPIGESNVRTLALALEASGRPFIWVLNPVWREGLPPGYVERV--SKQGKVVSWAPQ 338
Query: 345 LEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIV 404
LEVL H+A GC++THCGWNSTMEA+ ++ P DQ N YI+DVWK G++
Sbjct: 339 LEVLKHQAVGCYLTHCGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRISGF 398
Query: 405 KRDAIADCISEILE----GERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASL 457
+ + + + +++E GER +LR R + +EA S N L
Sbjct: 399 GQKEVEEGLRKVMEDSGMGERLMKLRE-----RAMGEEA---RLRSMMNFTTLKDEL 447
|
Length = 448 |
| >gnl|CDD|215293 PLN02534, PLN02534, UDP-glycosyltransferase | Back alignment and domain information |
|---|
Score = 174 bits (443), Expect = 5e-49
Identities = 132/490 (26%), Positives = 228/490 (46%), Gaps = 63/490 (12%)
Query: 8 PTSCKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF----FYKSLHRDSSSS 63
+ +L H +++ QGH+ P++ +R L +G+ V+LVTT F K++ R S
Sbjct: 4 SKAKQL-HFVLIPLMAQGHMIPMIDMARLLAERGVIVSLVTTPQNASRFAKTIDRARESG 62
Query: 64 -SIPLEAISDGYDEGG----YAQAESIEA--YLERFWQIGPQTLTELVEK-MNGSDSPVD 115
I L I E G +++ + L +F+ L + +E+ + + P
Sbjct: 63 LPIRLVQIPFPCKEVGLPIGCENLDTLPSRDLLRKFY-DAVDKLQQPLERFLEQAKPPPS 121
Query: 116 CIVYDSILLWALDVAKKFGLLGAPFLTQSC----AVDYIYYHVKKGSLELPLTGNEILLP 171
CI+ D L W A++F + F C + I H L + ++P
Sbjct: 122 CIISDKCLSWTSKTAQRFNIPRIVFHGMCCFSLLSSHNIRLH--NAHLSVSSDSEPFVVP 179
Query: 172 GMP---PLEPQDMP-SFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELE----EE 223
GMP + +P +F+ S P + + K + E A V+ N+F ELE E
Sbjct: 180 GMPQSIEITRAQLPGAFV----SLPDLDDVRNKMR-EAESTAFGVVVNSFNELEHGCAEA 234
Query: 224 VVEWL-RKTWSLRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVY 282
+ + +K W +GP +K+ D + G T+ C++WL+ SV+Y
Sbjct: 235 YEKAIKKKVWC---VGPVSLC---NKRNLDKFERGNKASIDETQ-CLEWLDSMKPRSVIY 287
Query: 283 VSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAK-----LPKKFSDETLTSHKSL 337
GS L ++ EL GL++S + F+WV++ E+ L K+ +E + L
Sbjct: 288 ACLGSLCRLVPSQLIELGLGLEASKKPFIWVIKTGEKHSELEEWLVKENFEERIKGRGLL 347
Query: 338 VVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKT 397
+ W PQ+ +L+H A G F+THCGWNST+E + GVPM+ P +++Q N K I++V +
Sbjct: 348 IKGWAPQVLILSHPAIGGFLTHCGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRI 407
Query: 398 GLKFPI---------------VKRDAIADCISEILE--GERGKELRRNAGKWRKLAKEAV 440
G++ + VK+D + + +++ GE G+ RR A + +A++A+
Sbjct: 408 GVRVGVEVPVRWGDEERVGVLVKKDEVEKAVKTLMDDGGEEGERRRRRAQELGVMARKAM 467
Query: 441 AKGGSSDSNI 450
GGSS N+
Sbjct: 468 ELGGSSHINL 477
|
Length = 491 |
| >gnl|CDD|215465 PLN02863, PLN02863, UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Score = 168 bits (428), Expect = 5e-47
Identities = 149/492 (30%), Positives = 226/492 (45%), Gaps = 80/492 (16%)
Query: 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVT-LVTTR---FFYKSLHRDSSSSSIPLEA 69
H LV +P QGH+ PLL + RL +G+ +T LVT + F L + S ++ L
Sbjct: 10 THVLVFPFPAQGHMIPLLDLTHRLALRGLTITVLVTPKNLPFLNPLLSKHPSIETLVLP- 68
Query: 70 ISDGYDEGGYAQAESIEAYLERFWQIGPQ-------TLTEL----VEKMNGSDSPVDCIV 118
+ SI + +E + P L EL + SP I+
Sbjct: 69 ---------FPSHPSIPSGVENVKDLPPSGFPLMIHALGELYAPLLSWFRSHPSPPVAII 119
Query: 119 YDSILLWALDVAKKFGL---LGAPFLTQSCAVDYIYYHVKKGSLELPLTGNEIL-LPGMP 174
D L W ++A + G+ + +P + ++ Y + + + P NEIL +P
Sbjct: 120 SDMFLGWTQNLACQLGIRRFVFSPSGAMALSIMYSLW-REMPTKINPDDQNEILSFSKIP 178
Query: 175 --PLEPQDMPSFIHDLGSY----PAVSYMMMKFQFENIDKADWVLC-NTFYELEEEVVEW 227
P P S ++ SY PA ++ F+ NI A W L N+F ELE +E
Sbjct: 179 NCPKYPWWQISSLYR--SYVEGDPAWEFIKDSFR-ANI--ASWGLVVNSFTELEGIYLEH 233
Query: 228 LRK------TWSLRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVV 281
L+K W+ +GP +P +K ++ S+ S + M WL+ VV
Sbjct: 234 LKKELGHDRVWA---VGPILP-LSGEKSGLMERGGPSSV---SVDDVMTWLDTCEDHKVV 286
Query: 282 YVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRE-----SEQAKLPKKFSDETLTSHKS 336
YV +GS V L E+ME LA GL+ S HF+W V+E S+ + +P F D + +
Sbjct: 287 YVCFGSQVVLTKEQMEALASGLEKSGVHFIWCVKEPVNEESDYSNIPSGFEDRV--AGRG 344
Query: 337 LVV-SWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVW 395
LV+ W PQ+ +L+H A G F+THCGWNS +E L GVPM+A P +DQ NA ++D
Sbjct: 345 LVIRGWAPQVAILSHRAVGAFLTHCGWNSVLEGLVAGVPMLAWPMAADQFVNASLLVDEL 404
Query: 396 KTGLKF---------PIVKRDAIADCISE-ILEGERGKELRRNAGKWRKLAKEAVAKGGS 445
K ++ + +SE +E ER KELRR A +A+ + GS
Sbjct: 405 KVAVRVCEGADTVPDSDELARVFMESVSENQVERERAKELRR-------AALDAIKERGS 457
Query: 446 SDSNIDEFVASL 457
S ++D FV +
Sbjct: 458 SVKDLDGFVKHV 469
|
Length = 477 |
| >gnl|CDD|177857 PLN02207, PLN02207, UDP-glycosyltransferase | Back alignment and domain information |
|---|
Score = 151 bits (382), Expect = 1e-40
Identities = 128/466 (27%), Positives = 217/466 (46%), Gaps = 50/466 (10%)
Query: 22 PGQGHINPLLQFSRRL--QHKGIKVTLVTTRFFYKSLHRD----SSSSSIPLEAISDG-- 73
P GH+ P L+F+RRL Q I++T++ + +S H D S +SS P D
Sbjct: 12 PTVGHLVPFLEFARRLIEQDDRIRITILLMKLQGQS-HLDTYVKSIASSQPFVRFIDVPE 70
Query: 74 -YDEGGYAQAESIEAYLERFWQIGPQTLTELVEKMNGSDS----PVDCIVYDSILLWALD 128
++ +S+EAY+ + + +V + S + V V D L +D
Sbjct: 71 LEEKPTLGGTQSVEAYVYDVIEKNIPLVRNIVMDILSSLALDGVKVKGFVADFFCLPMID 130
Query: 129 VAKKFGLLGAPFLTQSCA----VDYIYYHVKKGSLELPLTGNEIL-LPG-MPPLEPQDMP 182
VAK L FLT + + Y+ K + E+L +PG + P+ +P
Sbjct: 131 VAKDVSLPFYVFLTTNSGFLAMMQYLADRHSKDTSVFVRNSEEMLSIPGFVNPVPANVLP 190
Query: 183 S--FIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTWSLRTIGPT 240
S F+ D Y A + + F KA+ +L N+ +++E V + ++
Sbjct: 191 SALFVED--GYDAYVKLAILFT-----KANGILVNSSFDIEPYSVNHFLDEQNYPSVYAV 243
Query: 241 IPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELA 300
P F L Q ++D + + MKWL+D+ + SVV++ +GS L+ ++E+A
Sbjct: 244 GPIFDLKAQPHPEQDL------ARRDELMKWLDDQPEASVVFLCFGSMGRLRGPLVKEIA 297
Query: 301 WGLKSSDQHFLWVVRESEQAK---LPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFV 357
GL+ FLW +R E LP+ F D S + ++ W PQ+E+LAH+A G FV
Sbjct: 298 HGLELCQYRFLWSLRTEEVTNDDLLPEGFLDRV--SGRGMICGWSPQVEILAHKAVGGFV 355
Query: 358 THCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP---------IVKRDA 408
+HCGWNS +E+L GVP+V P +++Q NA ++ K ++ IV +
Sbjct: 356 SHCGWNSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKLDYRVHSDEIVNANE 415
Query: 409 IADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFV 454
I I ++ + +R+ ++ + A GGSS + I++F+
Sbjct: 416 IETAIRCVMNKD-NNVVRKRVMDISQMIQRATKNGGSSFAAIEKFI 460
|
Length = 468 |
| >gnl|CDD|215112 PLN02167, PLN02167, UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Score = 149 bits (379), Expect = 4e-40
Identities = 138/489 (28%), Positives = 223/489 (45%), Gaps = 63/489 (12%)
Query: 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVT-----------TRFFYKSLHRDS 60
K A + + +P GHI ++F++RL + ++ +T F KSL +
Sbjct: 2 KEAELIFVPFPSTGHILVTIEFAKRLINLDRRIHTITILYWSLPFAPQADAFLKSL--IA 59
Query: 61 SSSSIPLEAISDGYDEGGYAQ-AESIEAY-LERFWQIGP---QTLTELVEKMNGSDS-PV 114
S I L + + D ++ EAY LE ++ P L+ LV + SDS V
Sbjct: 60 SEPRIRLVTLPEVQDPPPMELFVKASEAYILEFVKKMVPLVRDALSTLVSSRDESDSVRV 119
Query: 115 DCIVYDSILLWALDVAKKFGLLGAPFLTQSCA----VDYIYYHVKKGSLELPLTGN--EI 168
+V D + +DV +F L FLT + + Y+ +K + E L+ E+
Sbjct: 120 AGLVLDFFCVPLIDVGNEFNLPSYIFLTCNAGFLGMMKYLPERHRKTASEFDLSSGEEEL 179
Query: 169 LLPGMPPLEPQD-MPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEW 227
+PG P +P + SY A + +F +A +L N+F ELE ++
Sbjct: 180 PIPGFVNSVPTKVLPPGLFMKESYEAWVEIAERFP-----EAKGILVNSFTELEPNAFDY 234
Query: 228 L-RKTWSLRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYG 286
R + + P P L + + D S + M+WL+D+ + SVV++ +G
Sbjct: 235 FSRLPENYPPVYPVGPILSLKDRTSPNLD------SSDRDRIMRWLDDQPESSVVFLCFG 288
Query: 287 SFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAK------LPKKFSDETLTSHKSLVVS 340
S L A +++E+A L+ FLW +R + LP+ F D + + LV
Sbjct: 289 SLGSLPAPQIKEIAQALELVGCRFLWSIRTNPAEYASPYEPLPEGFMDRVMG--RGLVCG 346
Query: 341 WCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYI--------- 391
W PQ+E+LAH+A G FV+HCGWNS +E+L GVP+ P +++Q NA +
Sbjct: 347 WAPQVEILAHKAIGGFVSHCGWNSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVE 406
Query: 392 --LD-VWKTGLKFPIVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDS 448
LD V G IVK D IA + +++GE R+ + + A++AV GGSS
Sbjct: 407 LRLDYVSAYG---EIVKADEIAGAVRSLMDGE--DVPRKKVKEIAEAARKAVMDGGSSFV 461
Query: 449 NIDEFVASL 457
+ F+ L
Sbjct: 462 AVKRFIDDL 470
|
Length = 475 |
| >gnl|CDD|215084 PLN00164, PLN00164, glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 145 bits (368), Expect = 1e-38
Identities = 107/396 (27%), Positives = 172/396 (43%), Gaps = 63/396 (15%)
Query: 105 EKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPL- 163
+ G PV +V D LDVA++ + + T + A+ + + E+ +
Sbjct: 102 AAIAGLSCPVAALVVDFFCTPLLDVARELAVPAYVYFTSTAAMLALMLRLPALDEEVAVE 161
Query: 164 ---TGNEILLPGMPPLEPQDMPSFIHD--LGSYPAVSYMMMKFQFENIDKADWVLCNTFY 218
+ +PG+PP+ +P+ + D +Y Y +F +A ++ NT
Sbjct: 162 FEEMEGAVDVPGLPPVPASSLPAPVMDKKSPNYAWFVYHGRRFM-----EAAGIIVNTAA 216
Query: 219 ELEEEVVEWL--------RKTWSLRTIGPTI-PSFYLDKQIEDDKDYGFSMFKSSTEACM 269
ELE V+ + R ++ IGP I +F + C+
Sbjct: 217 ELEPGVLAAIADGRCTPGRPAPTVYPIGPVISLAFTPPAE-------------QPPHECV 263
Query: 270 KWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAK-------- 321
+WL+ + SVV++ +GS A ++ E+A GL+ S FLWV+R A
Sbjct: 264 RWLDAQPPASVVFLCFGSMGFFDAPQVREIAAGLERSGHRFLWVLRGPPAAGSRHPTDAD 323
Query: 322 ----LPKKFSDETLTSHKSLV-VSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMV 376
LP+ F + T + LV +W PQ E+LAH A G FVTHCGWNS +E+L GVPM
Sbjct: 324 LDELLPEGFLERT--KGRGLVWPTWAPQKEILAHAAVGGFVTHCGWNSVLESLWHGVPMA 381
Query: 377 AMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGER------------GKE 424
P +++Q NA + L V G+ + K D D E E ER G++
Sbjct: 382 PWPLYAEQHLNA-FEL-VADMGVAVAM-KVDRKRDNFVEAAELERAVRSLMGGGEEEGRK 438
Query: 425 LRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLACS 460
R A + + ++AV +GGSS + + +
Sbjct: 439 AREKAAEMKAACRKAVEEGGSSYAALQRLAREIRHG 474
|
Length = 480 |
| >gnl|CDD|178572 PLN02992, PLN02992, coniferyl-alcohol glucosyltransferase | Back alignment and domain information |
|---|
Score = 142 bits (358), Expect = 3e-37
Identities = 125/484 (25%), Positives = 215/484 (44%), Gaps = 86/484 (17%)
Query: 15 HCLVLTYPGQGHINPLLQFSRRLQ-HKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDG 73
H + + PG GH+ P+++ +RL + G VT+ L D++S+ S G
Sbjct: 7 HAAMFSSPGMGHVIPVIELGKRLSANHGFHVTVFV-------LETDAASAQSKFLN-STG 58
Query: 74 YDEGG------YAQAESIEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWAL 127
D G + + + I + + L K+ ++ D AL
Sbjct: 59 VDIVGLPSPDISGLVDPSAHVVTKIGVIMREAVPTLRSKIAEMHQKPTALIVDLFGTDAL 118
Query: 128 DVAKKFGLLGAPFLTQSC---AVDYIYYHVKKG-SLELPLTGNEILLPGMPPLEPQD-MP 182
+ +F +L F+ + V Y + K E + + +PG P+ +D +
Sbjct: 119 CLGGEFNMLTYIFIASNARFLGVSIYYPTLDKDIKEEHTVQRKPLAMPGCEPVRFEDTLD 178
Query: 183 SFI-------HDL----GSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKT 231
+++ D +YP KAD +L NT+ E+E + ++ L+
Sbjct: 179 AYLVPDEPVYRDFVRHGLAYP---------------KADGILVNTWEEMEPKSLKSLQDP 223
Query: 232 WSLRTIG--PTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFV 289
L + P P L + I+ K + + WLN + ESV+Y+S+GS
Sbjct: 224 KLLGRVARVPVYPIGPLCRPIQSSK---------TDHPVLDWLNKQPNESVLYISFGSGG 274
Query: 290 ELKAEEMEELAWGLKSSDQHFLWVVR--------------------ESEQAKLPKKFSDE 329
L A+++ ELAWGL+ S Q F+WVVR ++ LP+ F
Sbjct: 275 SLSAKQLTELAWGLEMSQQRFVWVVRPPVDGSACSAYFSANGGETRDNTPEYLPEGFV-- 332
Query: 330 TLTSHKSLVV-SWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNA 388
+ T + VV SW PQ E+LAH+A G F+THCGW+ST+E++ GVPM+A P +++Q+ NA
Sbjct: 333 SRTHDRGFVVPSWAPQAEILAHQAVGGFLTHCGWSSTLESVVGGVPMIAWPLFAEQNMNA 392
Query: 389 KYILDVWKTGLKFP----IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVA--K 442
+ D ++ ++ R I + +++ E G+E+RR K R A+ +++
Sbjct: 393 ALLSDELGIAVRSDDPKEVISRSKIEALVRKVMVEEEGEEMRRKVKKLRDTAEMSLSIDG 452
Query: 443 GGSS 446
GG +
Sbjct: 453 GGVA 456
|
Length = 481 |
| >gnl|CDD|178581 PLN03004, PLN03004, UDP-glycosyltransferase | Back alignment and domain information |
|---|
Score = 140 bits (353), Expect = 8e-37
Identities = 83/240 (34%), Positives = 129/240 (53%), Gaps = 23/240 (9%)
Query: 170 LPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLR 229
+PG+PP++ DMP + + ++M Q + K+ ++ NTF LE ++ +
Sbjct: 173 IPGVPPMKGSDMPKAVLERDDEVYDVFIMFGKQ---LSKSSGIIINTFDALENRAIKAIT 229
Query: 230 KTWSLRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFV 289
+ R I P P ++ +IED D + +C+ WL+ + ++SVV++ +GS
Sbjct: 230 EELCFRNIYPIGP-LIVNGRIEDRND-------NKAVSCLNWLDSQPEKSVVFLCFGSLG 281
Query: 290 ELKAEEMEELAWGLKSSDQHFLWVVRESEQAK---------LPKKFSDETLTSHKSLVV- 339
E++ E+A GL+ S Q FLWVVR + + LP+ F T K +VV
Sbjct: 282 LFSKEQVIEIAVGLEKSGQRFLWVVRNPPELEKTELDLKSLLPEGFLSRT--EDKGMVVK 339
Query: 340 SWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGL 399
SW PQ+ VL H+A G FVTHCGWNS +EA+ GVPMVA P +++Q N I+D K +
Sbjct: 340 SWAPQVPVLNHKAVGGFVTHCGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAI 399
|
Length = 451 |
| >gnl|CDD|215304 PLN02554, PLN02554, UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Score = 136 bits (343), Expect = 4e-35
Identities = 129/483 (26%), Positives = 212/483 (43%), Gaps = 68/483 (14%)
Query: 21 YPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDE---- 76
PG GH+ P ++ ++ L ++++ T S D +SSS + ++S ++
Sbjct: 10 SPGIGHLRPTVELAKLLVDSDDRLSI--TVIIIPSRSGDDASSSAYIASLSASSEDRLRY 67
Query: 77 ----GGYAQAES---IEAYLERFWQIGPQTLTELVEKMNGSDSP-VDCIVYDSILLWALD 128
G ++Y++ + +LV+ + SP + V D +D
Sbjct: 68 EVISAGDQPTTEDPTFQSYIDNQKPKVRDAVAKLVDDSSTPSSPRLAGFVVDMFCTSMID 127
Query: 129 VAKKFGLLGAPFLTQSCAVDYIYYHV------KKGSL-ELPLTGNEILLPGMP-PLEPQD 180
VA +FG+ F T + + HV KK + EL + E+ +P + P +
Sbjct: 128 VANEFGVPSYMFYTSNATFLGLQLHVQMLYDEKKYDVSELEDSEVELDVPSLTRPYPVKC 187
Query: 181 MPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTWS-LRTIGP 239
+PS + P +F+ + +L NT ELE + +++ + L + P
Sbjct: 188 LPSVLLSKEWLPLFLAQARRFR-----EMKGILVNTVAELEPQALKFFSGSSGDLPPVYP 242
Query: 240 TIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEEL 299
P +L+ +D KD + +E ++WL+++ +SVV++ +GS E+ E+
Sbjct: 243 VGPVLHLENSGDDSKD------EKQSE-ILRWLDEQPPKSVVFLCFGSMGGFSEEQAREI 295
Query: 300 AWGLKSSDQHFLWVVRESEQAK--------------LPKKFSDETLTSHKSLVVSWCPQL 345
A L+ S FLW +R + LP+ F D T K V+ W PQ+
Sbjct: 296 AIALERSGHRFLWSLRRASPNIMKEPPGEFTNLEEILPEGFLDRTKDIGK--VIGWAPQV 353
Query: 346 EVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVK 405
VLA A G FVTHCGWNS +E+L GVPM A P +++Q NA V + GL I K
Sbjct: 354 AVLAKPAIGGFVTHCGWNSILESLWFGVPMAAWPLYAEQKFNA--FEMVEELGLAVEIRK 411
Query: 406 ---RDAIADCISEIL---EGERG-KELRRNAGKWRKLAKE-------AVAKGGSSDSNID 451
D +A E + E ERG + L RK KE A+ GGSS + +
Sbjct: 412 YWRGDLLAGE-METVTAEEIERGIRCLMEQDSDVRKRVKEMSEKCHVALMDGGSSHTALK 470
Query: 452 EFV 454
+F+
Sbjct: 471 KFI 473
|
Length = 481 |
| >gnl|CDD|178275 PLN02670, PLN02670, transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Score = 133 bits (337), Expect = 2e-34
Identities = 133/484 (27%), Positives = 214/484 (44%), Gaps = 73/484 (15%)
Query: 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHR------DSSSS----S 64
H + + GH+ P L+ S+ L KG K++ ++T ++LHR SSS S
Sbjct: 8 HVAMFPWLAMGHLIPFLRLSKLLAQKGHKISFISTP---RNLHRLPKIPSQLSSSITLVS 64
Query: 65 IPLEAISDGYDEGGYAQAESI-------EAYLERFWQIGPQTLTELVEKMNGSDSPVDCI 117
PL ++ G + AES + L++ + + LT +E + P D I
Sbjct: 65 FPLPSVP-----GLPSSAESSTDVPYTKQQLLKKAFDLLEPPLTTFLE----TSKP-DWI 114
Query: 118 VYDSILLWALDVAKKFGLLGAPF-LTQSCAVDYIYYHVKKGSLELPLTGNEILLPG---- 172
+YD W +A + G+ A F L + + +I G + G ++
Sbjct: 115 IYDYASHWLPSIAAELGISKAFFSLFTAATLSFI------GPPSSLMEGGDLRSTAEDFT 168
Query: 173 -MPPLEP--QDMPSFIHDLGSY----------PAVSYMMMKFQFENIDKADWVLCNTFYE 219
+PP P ++ H++ Y P+ S ++F F I +D V+ + E
Sbjct: 169 VVPPWVPFESNIVFRYHEVTKYVEKTEEDETGPSDS---VRFGF-AIGGSDVVIIRSSPE 224
Query: 220 LEEEVVEWLRKTWSLRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKES 279
E E + L + P IP +L IEDD++ K +WL+ + S
Sbjct: 225 FEPEWFDLLSDLYR----KPIIPIGFLPPVIEDDEEDDTIDVKGWVR-IKEWLDKQRVNS 279
Query: 280 VVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVR------ESEQAKLPKKFSDETLTS 333
VVYV+ G+ L+ EE+ ELA GL+ S+ F WV+R ++ LP F +E +
Sbjct: 280 VVYVALGTEASLRREEVTELALGLEKSETPFFWVLRNEPGTTQNALEMLPDGF-EERVKG 338
Query: 334 HKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILD 393
+ V W PQ+++L+HE+ G F+THCGWNS +E L G ++ P ++Q N + +L
Sbjct: 339 RGMIHVGWVPQVKILSHESVGGFLTHCGWNSVVEGLGFGRVLILFPVLNEQGLNTR-LLH 397
Query: 394 VWKTGLKFPIVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEF 453
K GL+ P +RD S + E R + + R AKE G D N +
Sbjct: 398 GKKLGLEVPRDERDGSFTSDS-VAESVRLAMVDDAGEEIRDKAKEMRNLFGDMDRNN-RY 455
Query: 454 VASL 457
V L
Sbjct: 456 VDEL 459
|
Length = 472 |
| >gnl|CDD|178589 PLN03015, PLN03015, UDP-glucosyl transferase | Back alignment and domain information |
|---|
Score = 132 bits (332), Expect = 1e-33
Identities = 121/486 (24%), Positives = 210/486 (43%), Gaps = 75/486 (15%)
Query: 15 HCLVLTYPGQGHINPLLQFSRRLQHK-GIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDG 73
H L++ PG GH+ P+L+ RL I VT++ SSS EAI
Sbjct: 5 HALLVASPGLGHLIPILELGNRLSSVLNIHVTILAVT--------SGSSSPTETEAIHAA 56
Query: 74 YDEGGYAQAESIEAYLERFWQIGPQTLTELVEKMNGSDSPV-----------DCIVYDSI 122
E ++ + T++V KM V ++ D
Sbjct: 57 AARTTCQITEIPSVDVDNLVEPDATIFTKMVVKMRAMKPAVRDAVKSMKRKPTVMIVDFF 116
Query: 123 LLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNEI------LLPGMPPL 176
+ +A G+ A ++ ++ V L+ + G + +PG P+
Sbjct: 117 GTALMSIADDVGVT-AKYVYIPSHAWFLAVMVYLPVLDTVVEGEYVDIKEPLKIPGCKPV 175
Query: 177 EPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTWSLR- 235
P+++ + D + + + +D VL NT+ EL+ + LR+ L
Sbjct: 176 GPKELMETMLDRSDQQYKECVRSGLE---VPMSDGVLVNTWEELQGNTLAALREDMELNR 232
Query: 236 -------TIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSF 288
IGP + + ++ + +WL+ + + SVVYV GS
Sbjct: 233 VMKVPVYPIGPIVRT---------------NVHVEKRNSIFEWLDKQGERSVVYVCLGSG 277
Query: 289 VELKAEEMEELAWGLKSSDQHFLWVVR-------------ESEQAKLPKKFSDETLTSHK 335
L E+ ELAWGL+ S Q F+WV+R + A LP+ F D T
Sbjct: 278 GTLTFEQTVELAWGLELSGQRFVWVLRRPASYLGASSSDDDQVSASLPEGFLDRT-RGVG 336
Query: 336 SLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILD-- 393
+V W PQ+E+L+H + G F++HCGW+S +E+L+ GVP+VA P +++Q NA + +
Sbjct: 337 LVVTQWAPQVEILSHRSIGGFLSHCGWSSVLESLTKGVPIVAWPLYAEQWMNATLLTEEI 396
Query: 394 -VWKTGLKFP---IVKRDAIADCISEIL--EGERGKELRRNAGKWRKLAKEAVAKGGSSD 447
V + P ++ R+ +A + +I+ E E G+++R A + R ++ A + GGSS
Sbjct: 397 GVAVRTSELPSEKVIGREEVASLVRKIVAEEDEEGQKIRAKAEEVRVSSERAWSHGGSSY 456
Query: 448 SNIDEF 453
+++ E+
Sbjct: 457 NSLFEW 462
|
Length = 470 |
| >gnl|CDD|99960 cd03784, GT1_Gtf_like, This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Score = 119 bits (299), Expect = 1e-29
Identities = 72/447 (16%), Positives = 121/447 (27%), Gaps = 93/447 (20%)
Query: 17 LVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSS-IPLEAISDGYD 75
L+ T +G + PL+ + L+ G +V + T F D ++ + + D
Sbjct: 4 LITTIGSRGDVQPLVALAWALRAAGHEVRVATPPEF-----ADLVEAAGLEFVPVGGDPD 58
Query: 76 EGGYAQAESIEAYLERFWQIGPQTLTELVEKMNGS----------DSPVDCIVYDSILLW 125
E + A L L+ + + D D +V D +
Sbjct: 59 E--LLASPERNAGLLLLGPGLLLGALRLLRREAEAMLDDLVAAARDWGPDLVVADPLAFA 116
Query: 126 ALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNEILLPGMPPLEPQDMPSFI 185
A+ G+ L P P +F
Sbjct: 117 GAVAAEALGIPAVRLLLG---------------------------PDTPT------SAFP 143
Query: 186 HDLGSYPAVSYMMMKFQFENIDKADWVLCNTF----YELEEEVVEWLRKTWSLRTIGPTI 241
LG Y +++ + W L + L P +
Sbjct: 144 PPLGRANLRLYALLEAELWQDLLGAW---LRARRRRLGLPPLSLLDGSDVPELYGFSPAV 200
Query: 242 PSFYLDKQIEDDKDYGFSMF------KSSTEACMKWLNDRAKESVVYVSYGSFVELKAEE 295
D D G+ E WL A VYV +GS V E
Sbjct: 201 LPPPPD-WPRFDLVTGYGFRDVPYNGPPPPEL---WLFLAAGRPPVYVGFGSMVVRDPEA 256
Query: 296 M-EELAWGLKSSDQHFLWVVRESEQA--KLPKKFSDETLTSHKSLVVSWCPQLEVLAHEA 352
+ + + Q + + LP VV + P +L
Sbjct: 257 LARLDVEAVATLGQRAILSLGWGGLGAEDLPDNV----------RVVDFVPHDWLLPR-- 304
Query: 353 TGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLK--FPIVKRDAIA 410
V H G +T AL GVP + +P + DQ A + G + + +A
Sbjct: 305 CAAVVHHGGAGTTAAALRAGVPQLVVPFFGDQPFWAA-RVAELGAGPALDPRELTAERLA 363
Query: 411 DCISEILEG-------ERGKELRRNAG 430
+ +L+ + +R G
Sbjct: 364 AALRRLLDPPSRRRAAALLRRIREEDG 390
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. Length = 401 |
| >gnl|CDD|201077 pfam00201, UDPGT, UDP-glucoronosyl and UDP-glucosyl transferase | Back alignment and domain information |
|---|
Score = 104 bits (262), Expect = 3e-24
Identities = 44/149 (29%), Positives = 66/149 (44%), Gaps = 12/149 (8%)
Query: 278 ESVVYVSYGSFV-ELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKS 336
VV S GS V + E+ E+A L Q LW ++ + L + +
Sbjct: 276 HGVVVFSLGSMVSNIPEEKANEIASALAQIPQKVLWRFDGTKPSTLGRN----------T 325
Query: 337 LVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWK 396
+V W PQ ++L H T FVTH G N EA+ GVPMV MP + DQ NAK++
Sbjct: 326 RLVKWLPQNDLLGHPKTRAFVTHAGSNGVYEAICHGVPMVGMPLFGDQMDNAKHMEAKGA 385
Query: 397 TG-LKFPIVKRDAIADCISEILEGERGKE 424
L + + + + + ++ KE
Sbjct: 386 AVTLNVLTMTSEDLLNALKTVINDPSYKE 414
|
Length = 500 |
| >gnl|CDD|178364 PLN02764, PLN02764, glycosyltransferase family protein | Back alignment and domain information |
|---|
Score = 95.5 bits (237), Expect = 3e-21
Identities = 118/473 (24%), Positives = 202/473 (42%), Gaps = 70/473 (14%)
Query: 18 VLTYP--GQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSL-HRDSSSSSIPLEAISDGY 74
VL YP GH+ P L + +L KG VT + + K L H + +I +++ +
Sbjct: 8 VLMYPWFATGHMTPFLFLANKLAEKGHTVTFLLPKKALKQLEHLNLFPHNIVFRSVTVPH 67
Query: 75 DEGGYAQAESIEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVY----DSILL----WA 126
+G E++ +I + L+ M+ + V+ +V D I W
Sbjct: 68 VDGLPVGTETVS-------EIPVTSADLLMSAMDLTRDQVEVVVRAVEPDLIFFDFAHWI 120
Query: 127 LDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTG---NEILLPG-----MPPLEP 178
+VA+ FGL ++ S A V G L +P G +++LL M LEP
Sbjct: 121 PEVARDFGLKTVKYVVVS-ASTIASMLVPGGELGVPPPGYPSSKVLLRKQDAYTMKNLEP 179
Query: 179 QDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTWSLRTI- 237
+ +L S M +D + T E+E +++ K + +
Sbjct: 180 TNTIDVGPNLLERVTTSLM----------NSDVIAIRTAREIEGNFCDYIEKHCRKKVLL 229
Query: 238 -GPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEM 296
GP P E DK + E +KWL+ +SVV+ + GS V L+ ++
Sbjct: 230 TGPVFP--------EPDKT------RELEERWVKWLSGYEPDSVVFCALGSQVILEKDQF 275
Query: 297 EELAWGLKSSDQHFLWVVR-----ESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHE 351
+EL G++ + FL V+ + Q LP+ F +E + + W Q +L+H
Sbjct: 276 QELCLGMELTGSPFLVAVKPPRGSSTIQEALPEGF-EERVKGRGVVWGGWVQQPLILSHP 334
Query: 352 ATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP-----IVKR 406
+ GCFV+HCG+ S E+L +V +PQ DQ N + + D K ++ +
Sbjct: 335 SVGCFVSHCGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREETGWFSK 394
Query: 407 DAIADCISEIL--EGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASL 457
+++ D I+ ++ + E G +++N KWR E +A G +D F+ SL
Sbjct: 395 ESLRDAINSVMKRDSEIGNLVKKNHTKWR----ETLASPGLLTGYVDNFIESL 443
|
Length = 453 |
| >gnl|CDD|233407 TIGR01426, MGT, glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Score = 91.3 bits (227), Expect = 5e-20
Identities = 103/450 (22%), Positives = 153/450 (34%), Gaps = 101/450 (22%)
Query: 22 PGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGYAQ 81
P GH+NP L L +G +VT TT F + + + + + + D
Sbjct: 4 PAHGHVNPTLGVVEELVARGHRVTYATTEEFAERVEA-AGAEFVLYGSALPPPDNPPENT 62
Query: 82 AESIEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFL 141
E +E+ L +L E G D P D IVYD +A+K+ + P +
Sbjct: 63 EEEPIDIIEKLLDEAEDVLPQLEEAYKG-DRP-DLIVYDIASWTGRLLARKWDV---PVI 117
Query: 142 TQSCAVDYIYYHVKKGSLELP---LTGNEILLPGMPPLEPQ----------DMPS--FIH 186
S ++ I G+ + P F+
Sbjct: 118 -SSFPTFAANEEFEEMVSPAGEGSAEEGAIAERGLAEYVARLSALLEEHGITTPPVEFLA 176
Query: 187 DLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTWSLRTIGPTIPSFYL 246
+ Y FQ + TF + S +GP I
Sbjct: 177 APRRDLNLVYTPKAFQP-AGE--------TFDD-------------SFTFVGPCIG---- 210
Query: 247 DKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGS-------FVELKAEEMEEL 299
D K+ G W VV +S G+ F E +L
Sbjct: 211 -----DRKEDG------------SWERPGDGRPVVLISLGTVFNNQPSFYRTCVEAFRDL 253
Query: 300 AWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTH 359
W + S V ++ +LP V W PQLE+L F+TH
Sbjct: 254 DWHVVLSVGRG---VDPADLGELPPNV----------EVRQWVPQLEILKK--ADAFITH 298
Query: 360 CGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEG 419
G NSTMEAL GVPMVA+PQ +DQ A+ I ++ GL + + A+ + E +
Sbjct: 299 GGMNSTMEALFNGVPMVAVPQGADQPMTARRIAEL---GLGRHLPPEEVTAEKLREAVLA 355
Query: 420 --------ERGKELR---RNAGKWRKLAKE 438
ER +++R R AG R+ A E
Sbjct: 356 VLSDPRYAERLRKMRAEIREAGGARRAADE 385
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production [Cellular processes, Toxin production and resistance]. Length = 392 |
| >gnl|CDD|224732 COG1819, COG1819, Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | Back alignment and domain information |
|---|
Score = 88.6 bits (220), Expect = 5e-19
Identities = 86/457 (18%), Positives = 152/457 (33%), Gaps = 75/457 (16%)
Query: 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTT-RFFYKSLHRDSSSSSIPLEAISDG 73
L + GH+NP L + L+ +G +V +T +F + + P+
Sbjct: 3 KILFVVCGAYGHVNPCLALGKELRRRGHEVVFASTGKFKEFVEAAGLAFVAYPIRDSELA 62
Query: 74 YDEGGYAQAESIEAYLERFWQIGPQTLTELVEK------MNGSDSPVDCIVYDSILLWAL 127
++G +A +S L++F ++ + L L E + S I + +
Sbjct: 63 TEDGKFAGVKSFRRLLQQFKKLIRELLELLRELEPDLVVDDARLSLGLAARLLGIPVVGI 122
Query: 128 DVAK----KFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNEILLPGMPPLEPQDMPS 183
+VA L P + I LP L+ L +
Sbjct: 123 NVAPYTPLPAAGLPLPPV-GIAGKLPIPL------YPLPPRLVRPLIFARSWLP--KLVV 173
Query: 184 FIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTWSLRTIGPTIPS 243
+ ++ + F + + + P I
Sbjct: 174 RRN-----------------LGLELGLPNIRRLFASGPLLEIAYTDVLFPPGDRLPFIGP 216
Query: 244 FYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGS---FVELKAEEMEELA 300
+ A A +VYVS G+ VEL A +E LA
Sbjct: 217 YI--------------GPLLGEAANELPYWIPADRPIVYVSLGTVGNAVELLAIVLEALA 262
Query: 301 WGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHC 360
L L R++ +P +V + PQLE+L + H
Sbjct: 263 -DLDVRVIVSLGGARDTLVN-VPDNV----------IVADYVPQLELLPR--ADAVIHHG 308
Query: 361 GWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTG--LKFPIVKRDAIADCISEILE 418
G +T EAL GVP+V +P +DQ NA+ + ++ G L F + + + ++E+L
Sbjct: 309 GAGTTSEALYAGVPLVVIPDGADQPLNAERVEEL-GAGIALPFEELTEERLRAAVNEVLA 367
Query: 419 GERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVA 455
+ RR A + + KE ++D ++EF
Sbjct: 368 DD---SYRRAAERLAEEFKEEDGPAKAADL-LEEFAR 400
|
Length = 406 |
| >gnl|CDD|177858 PLN02208, PLN02208, glycosyltransferase family protein | Back alignment and domain information |
|---|
Score = 87.8 bits (217), Expect = 1e-18
Identities = 104/462 (22%), Positives = 191/462 (41%), Gaps = 49/462 (10%)
Query: 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSL-HRDSSSSSIPLEAISDG 73
H + + GH+ P L + +L KG +VT + + K L H + SI ++
Sbjct: 6 HAFMFPWFAFGHMIPFLHLANKLAEKGHRVTFLLPKKAQKQLEHHNLFPDSIVFHPLTIP 65
Query: 74 YDEGGYAQAES---IEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVA 130
G A AE+ I ++ + VE + P D I +D W ++A
Sbjct: 66 PVNGLPAGAETTSDIPISMDNLLSEALDLTRDQVEAAVRALRP-DLIFFD-FAQWIPEMA 123
Query: 131 KKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNEILLPGMPPLEPQDMPSFIHDLGS 190
K+ + ++ A + HV G L +P PG P + + H L +
Sbjct: 124 KEHMIKSVSYII-VSATTIAHTHVPGGKLGVPP-------PGYPSSKVLFRENDAHALAT 175
Query: 191 YPAVSYMMMKFQFEN-IDKADWVLCNTFYELEEEVVEWLRKTWSLRTI--GPTIPSFYLD 247
++ Y + Q + D + T E+E + +++ + + + + GP P
Sbjct: 176 L-SIFYKRLYHQITTGLKSCDVIALRTCKEIEGKFCDYISRQYHKKVLLTGPMFPEPDTS 234
Query: 248 KQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSD 307
K +E+ + S F +SVV+ S GS + L+ ++ +EL G++ +
Sbjct: 235 KPLEEQWSHFLSGF--------------PPKSVVFCSLGSQIILEKDQFQELCLGMELTG 280
Query: 308 QHFLWVVR-----ESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGW 362
FL V+ + Q LP+ F +E + + W Q +L H + GCFV HCG
Sbjct: 281 LPFLIAVKPPRGSSTVQEGLPEGF-EERVKGRGVVWGGWVQQPLILDHPSIGCFVNHCGP 339
Query: 363 NSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVK-----RDAIADCISEIL 417
+ E+L MV +P SDQ + + + ++ ++ K ++++++ I ++
Sbjct: 340 GTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREKTGWFSKESLSNAIKSVM 399
Query: 418 EGER--GKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASL 457
+ + GK +R N K KE + G +D+FV L
Sbjct: 400 DKDSDLGKLVRSNHTK----LKEILVSPGLLTGYVDKFVEEL 437
|
Length = 442 |
| >gnl|CDD|177807 PLN00414, PLN00414, glycosyltransferase family protein | Back alignment and domain information |
|---|
Score = 80.5 bits (198), Expect = 3e-16
Identities = 105/472 (22%), Positives = 193/472 (40%), Gaps = 56/472 (11%)
Query: 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHR-DSSSSSIPLEAISDG 73
H + + G GH+ P L + +L KG +VT + +K L + SI E ++
Sbjct: 6 HAFMYPWFGFGHMIPYLHLANKLAEKGHRVTFFLPKKAHKQLQPLNLFPDSIVFEPLTLP 65
Query: 74 YDEG---GYAQAESIEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVA 130
+G G A + ++ L + +E + P D I +D + W ++A
Sbjct: 66 PVDGLPFGAETASDLPNSTKKPIFDAMDLLRDQIEAKVRALKP-DLIFFD-FVHWVPEMA 123
Query: 131 KKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNEILLPGMPPLEPQDMPSFIHDLGS 190
K+FG+ + S A + + L P P PL + ++ S
Sbjct: 124 KEFGIKSVNYQIISAACVAMVL-APRAELGFP--------PPDYPLSKVALRGHDANVCS 174
Query: 191 YPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTWSLRTI--GPTI--PSFYL 246
A S+ + + + D V T ELE + +++ + + + GP + P
Sbjct: 175 LFANSHELFGLITKGLKNCDVVSIRTCVELEGNLCDFIERQCQRKVLLTGPMLPEPQNKS 234
Query: 247 DKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSS 306
K +ED ++ WLN SVV+ ++G+ + ++ +E G++ +
Sbjct: 235 GKPLEDRWNH--------------WLNGFEPGSVVFCAFGTQFFFEKDQFQEFCLGMELT 280
Query: 307 DQHFLWVV-----RESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCG 361
FL V + Q LP+ F +E + + W Q +L+H + GCFV HCG
Sbjct: 281 GLPFLIAVMPPKGSSTVQEALPEGF-EERVKGRGIVWEGWVEQPLILSHPSVGCFVNHCG 339
Query: 362 WNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRD--------AIADCI 413
+ S E+L +V +PQ +DQ + + + + +K V+R+ ++ D +
Sbjct: 340 FGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVK---VQREDSGWFSKESLRDTV 396
Query: 414 SEILE--GERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLACSKNS 463
+++ E G ++RN K KE + G D+FV +L N+
Sbjct: 397 KSVMDKDSEIGNLVKRN----HKKLKETLVSPGLLSGYADKFVEALENEVNN 444
|
Length = 446 |
| >gnl|CDD|223071 PHA03392, egt, ecdysteroid UDP-glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 70.4 bits (173), Expect = 5e-13
Identities = 39/120 (32%), Positives = 50/120 (41%), Gaps = 14/120 (11%)
Query: 274 DRAKESVVYVSYGSFVELK---AEEMEELAWGLKSSDQHFLWVVR-ESEQAKLPKKFSDE 329
+ + VVYVS+GS ++ E ++ L K + LW E E LP
Sbjct: 292 NNSTNGVVYVSFGSSIDTNDMDNEFLQMLLRTFKKLPYNVLWKYDGEVEAINLPANV--- 348
Query: 330 TLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAK 389
L W PQ VL H+ FVT G ST EA+ VPMV +P DQ N
Sbjct: 349 -------LTQKWFPQRAVLKHKNVKAFVTQGGVQSTDEAIDALVPMVGLPMMGDQFYNTN 401
|
Length = 507 |
| >gnl|CDD|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 8e-04
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 363 NSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILE-GER 421
+EA++ G+P+VA SD + + D +TGL P +A+A+ I +L+ E
Sbjct: 290 LVLLEAMAAGLPVVA----SDVGGIPEVVED-GETGLLVPPGDPEALAEAILRLLDDPEL 344
Query: 422 GKELRRNAGKWRK 434
+ L A +
Sbjct: 345 RRRLGEAARERVA 357
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. Length = 374 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 464 | |||
| PLN02555 | 480 | limonoid glucosyltransferase | 100.0 | |
| PLN02173 | 449 | UDP-glucosyl transferase family protein | 100.0 | |
| PLN02410 | 451 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 100.0 | |
| PLN02562 | 448 | UDP-glycosyltransferase | 100.0 | |
| PLN02210 | 456 | UDP-glucosyl transferase | 100.0 | |
| PLN02152 | 455 | indole-3-acetate beta-glucosyltransferase | 100.0 | |
| PLN02448 | 459 | UDP-glycosyltransferase family protein | 100.0 | |
| PLN02207 | 468 | UDP-glycosyltransferase | 100.0 | |
| PLN02863 | 477 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 100.0 | |
| PLN02992 | 481 | coniferyl-alcohol glucosyltransferase | 100.0 | |
| PLN03007 | 482 | UDP-glucosyltransferase family protein | 100.0 | |
| PLN02534 | 491 | UDP-glycosyltransferase | 100.0 | |
| PLN00164 | 480 | glucosyltransferase; Provisional | 100.0 | |
| PLN02670 | 472 | transferase, transferring glycosyl groups | 100.0 | |
| PLN02554 | 481 | UDP-glycosyltransferase family protein | 100.0 | |
| PLN03015 | 470 | UDP-glucosyl transferase | 100.0 | |
| PLN03004 | 451 | UDP-glycosyltransferase | 100.0 | |
| PLN02167 | 475 | UDP-glycosyltransferase family protein | 100.0 | |
| PLN02764 | 453 | glycosyltransferase family protein | 100.0 | |
| PLN02208 | 442 | glycosyltransferase family protein | 100.0 | |
| PLN00414 | 446 | glycosyltransferase family protein | 100.0 | |
| PHA03392 | 507 | egt ecdysteroid UDP-glucosyltransferase; Provision | 100.0 | |
| PF00201 | 500 | UDPGT: UDP-glucoronosyl and UDP-glucosyl transfera | 100.0 | |
| TIGR01426 | 392 | MGT glycosyltransferase, MGT family. This model de | 100.0 | |
| cd03784 | 401 | GT1_Gtf_like This family includes the Gtfs, a grou | 100.0 | |
| COG1819 | 406 | Glycosyl transferases, related to UDP-glucuronosyl | 100.0 | |
| KOG1192 | 496 | consensus UDP-glucuronosyl and UDP-glucosyl transf | 100.0 | |
| PRK12446 | 352 | undecaprenyldiphospho-muramoylpentapeptide beta-N- | 99.96 | |
| PF13528 | 318 | Glyco_trans_1_3: Glycosyl transferase family 1 | 99.96 | |
| COG0707 | 357 | MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami | 99.93 | |
| TIGR00661 | 321 | MJ1255 conserved hypothetical protein. This model | 99.92 | |
| PRK00726 | 357 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.88 | |
| cd03785 | 350 | GT1_MurG MurG is an N-acetylglucosaminyltransferas | 99.85 | |
| TIGR01133 | 348 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.8 | |
| COG4671 | 400 | Predicted glycosyl transferase [General function p | 99.79 | |
| TIGR00215 | 385 | lpxB lipid-A-disaccharide synthase. Lipid-A precur | 99.76 | |
| TIGR03590 | 279 | PseG pseudaminic acid biosynthesis-associated prot | 99.75 | |
| PRK13609 | 380 | diacylglycerol glucosyltransferase; Provisional | 99.74 | |
| PRK13608 | 391 | diacylglycerol glucosyltransferase; Provisional | 99.69 | |
| PRK00025 | 380 | lpxB lipid-A-disaccharide synthase; Reviewed | 99.66 | |
| PF04101 | 167 | Glyco_tran_28_C: Glycosyltransferase family 28 C-t | 99.6 | |
| TIGR03492 | 396 | conserved hypothetical protein. This protein famil | 99.6 | |
| PLN02605 | 382 | monogalactosyldiacylglycerol synthase | 99.59 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely r | 99.48 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 99.48 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to | 99.48 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related | 99.45 | |
| PLN02871 | 465 | UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | 99.45 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related | 99.42 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to | 99.42 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related | 99.42 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 99.41 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related | 99.39 | |
| COG3980 | 318 | spsG Spore coat polysaccharide biosynthesis protei | 99.39 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 99.37 | |
| PF03033 | 139 | Glyco_transf_28: Glycosyltransferase family 28 N-t | 99.37 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino | 99.35 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related | 99.34 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related | 99.33 | |
| TIGR02472 | 439 | sucr_P_syn_N sucrose-phosphate synthase, putative, | 99.32 | |
| cd03805 | 392 | GT1_ALG2_like This family is most closely related | 99.31 | |
| PRK05749 | 425 | 3-deoxy-D-manno-octulosonic-acid transferase; Revi | 99.28 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related | 99.27 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related | 99.25 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to | 99.24 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related | 99.23 | |
| TIGR02470 | 784 | sucr_synth sucrose synthase. This model represents | 99.21 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the trans | 99.2 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related | 99.19 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related | 99.18 | |
| PRK09922 | 359 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D | 99.17 | |
| TIGR00236 | 365 | wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras | 99.16 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely rela | 99.15 | |
| PF04007 | 335 | DUF354: Protein of unknown function (DUF354); Inte | 99.15 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related | 99.14 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related | 99.14 | |
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system ass | 99.11 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltran | 99.09 | |
| cd03786 | 363 | GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th | 99.08 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely relate | 99.07 | |
| cd04951 | 360 | GT1_WbdM_like This family is most closely related | 99.07 | |
| PLN00142 | 815 | sucrose synthase | 99.07 | |
| TIGR02149 | 388 | glgA_Coryne glycogen synthase, Corynebacterium fam | 99.04 | |
| PRK14089 | 347 | ipid-A-disaccharide synthase; Provisional | 99.04 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to | 99.02 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related | 99.01 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related | 98.97 | |
| PRK15427 | 406 | colanic acid biosynthesis glycosyltransferase WcaL | 98.95 | |
| PLN02275 | 371 | transferase, transferring glycosyl groups | 98.94 | |
| PLN02949 | 463 | transferase, transferring glycosyl groups | 98.89 | |
| PRK00654 | 466 | glgA glycogen synthase; Provisional | 98.88 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related | 98.86 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylas | 98.83 | |
| COG1519 | 419 | KdtA 3-deoxy-D-manno-octulosonic-acid transferase | 98.82 | |
| TIGR03087 | 397 | stp1 sugar transferase, PEP-CTERM/EpsH1 system ass | 98.82 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 98.79 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related | 98.78 | |
| KOG3349 | 170 | consensus Predicted glycosyltransferase [General f | 98.73 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related | 98.72 | |
| TIGR02095 | 473 | glgA glycogen/starch synthases, ADP-glucose type. | 98.71 | |
| PLN02316 | 1036 | synthase/transferase | 98.67 | |
| PF02350 | 346 | Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; | 98.67 | |
| PRK15484 | 380 | lipopolysaccharide 1,2-N-acetylglucosaminetransfer | 98.66 | |
| PRK01021 | 608 | lpxB lipid-A-disaccharide synthase; Reviewed | 98.65 | |
| TIGR03568 | 365 | NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, | 98.64 | |
| COG0763 | 381 | LpxB Lipid A disaccharide synthetase [Cell envelop | 98.63 | |
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is mo | 98.61 | |
| PF02684 | 373 | LpxB: Lipid-A-disaccharide synthetase; InterPro: I | 98.57 | |
| TIGR02918 | 500 | accessory Sec system glycosylation protein GtfA. M | 98.57 | |
| PLN02846 | 462 | digalactosyldiacylglycerol synthase | 98.52 | |
| cd04950 | 373 | GT1_like_1 Glycosyltransferases catalyze the trans | 98.5 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related | 98.45 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to | 98.41 | |
| COG0381 | 383 | WecB UDP-N-acetylglucosamine 2-epimerase [Cell env | 98.41 | |
| PRK10017 | 426 | colanic acid biosynthesis protein; Provisional | 98.41 | |
| PF00534 | 172 | Glycos_transf_1: Glycosyl transferases group 1; In | 98.4 | |
| PRK15490 | 578 | Vi polysaccharide biosynthesis protein TviE; Provi | 98.32 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 98.31 | |
| PRK10125 | 405 | putative glycosyl transferase; Provisional | 98.29 | |
| PF13844 | 468 | Glyco_transf_41: Glycosyl transferase family 41; P | 98.12 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related | 98.12 | |
| COG5017 | 161 | Uncharacterized conserved protein [Function unknow | 98.06 | |
| PRK14099 | 485 | glycogen synthase; Provisional | 98.04 | |
| PLN02501 | 794 | digalactosyldiacylglycerol synthase | 97.96 | |
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases | 97.95 | |
| COG3914 | 620 | Spy Predicted O-linked N-acetylglucosamine transfe | 97.85 | |
| PF13692 | 135 | Glyco_trans_1_4: Glycosyl transferases group 1; PD | 97.74 | |
| PHA01633 | 335 | putative glycosyl transferase group 1 | 97.67 | |
| TIGR02193 | 319 | heptsyl_trn_I lipopolysaccharide heptosyltransfera | 97.66 | |
| PRK09814 | 333 | beta-1,6-galactofuranosyltransferase; Provisional | 97.64 | |
| PRK10422 | 352 | lipopolysaccharide core biosynthesis protein; Prov | 97.63 | |
| PRK10916 | 348 | ADP-heptose:LPS heptosyltransferase II; Provisiona | 97.57 | |
| TIGR02201 | 344 | heptsyl_trn_III lipopolysaccharide heptosyltransfe | 97.43 | |
| TIGR02195 | 334 | heptsyl_trn_II lipopolysaccharide heptosyltransfer | 97.42 | |
| PRK10964 | 322 | ADP-heptose:LPS heptosyl transferase I; Provisiona | 97.36 | |
| KOG4626 | 966 | consensus O-linked N-acetylglucosamine transferase | 97.32 | |
| COG0859 | 334 | RfaF ADP-heptose:LPS heptosyltransferase [Cell env | 97.32 | |
| COG1817 | 346 | Uncharacterized protein conserved in archaea [Func | 97.29 | |
| PRK14098 | 489 | glycogen synthase; Provisional | 97.28 | |
| PF06722 | 97 | DUF1205: Protein of unknown function (DUF1205); In | 97.22 | |
| cd03789 | 279 | GT1_LPS_heptosyltransferase Lipopolysaccharide hep | 96.93 | |
| PF13477 | 139 | Glyco_trans_4_2: Glycosyl transferase 4-like | 96.64 | |
| PF06258 | 311 | Mito_fiss_Elm1: Mitochondrial fission ELM1; InterP | 96.49 | |
| PHA01630 | 331 | putative group 1 glycosyl transferase | 96.26 | |
| PF13524 | 92 | Glyco_trans_1_2: Glycosyl transferases group 1 | 96.23 | |
| PF01975 | 196 | SurE: Survival protein SurE; InterPro: IPR002828 T | 96.13 | |
| TIGR02400 | 456 | trehalose_OtsA alpha,alpha-trehalose-phosphate syn | 96.03 | |
| PF10093 | 374 | DUF2331: Uncharacterized protein conserved in bact | 95.82 | |
| cd03788 | 460 | GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a | 95.66 | |
| PF13579 | 160 | Glyco_trans_4_4: Glycosyl transferase 4-like domai | 95.63 | |
| TIGR03713 | 519 | acc_sec_asp1 accessory Sec system protein Asp1. Th | 95.36 | |
| COG3660 | 329 | Predicted nucleoside-diphosphate-sugar epimerase [ | 95.13 | |
| COG0438 | 381 | RfaG Glycosyltransferase [Cell envelope biogenesis | 94.27 | |
| PF05159 | 269 | Capsule_synth: Capsule polysaccharide biosynthesis | 93.98 | |
| PF08660 | 170 | Alg14: Oligosaccharide biosynthesis protein Alg14 | 93.59 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 93.5 | |
| COG0496 | 252 | SurE Predicted acid phosphatase [General function | 93.5 | |
| TIGR02919 | 438 | accessory Sec system glycosyltransferase GtfB. Mem | 93.47 | |
| PRK13932 | 257 | stationary phase survival protein SurE; Provisiona | 93.44 | |
| PF04464 | 369 | Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate | 93.23 | |
| PRK13933 | 253 | stationary phase survival protein SurE; Provisiona | 92.79 | |
| TIGR00087 | 244 | surE 5'/3'-nucleotidase SurE. E. coli SurE is Reco | 92.05 | |
| PRK13935 | 253 | stationary phase survival protein SurE; Provisiona | 92.03 | |
| PF12000 | 171 | Glyco_trans_4_3: Gkycosyl transferase family 4 gro | 91.96 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 91.9 | |
| PRK13934 | 266 | stationary phase survival protein SurE; Provisiona | 91.08 | |
| PRK00346 | 250 | surE 5'(3')-nucleotidase/polyphosphatase; Provisio | 91.03 | |
| PF13439 | 177 | Glyco_transf_4: Glycosyltransferase Family 4; PDB: | 90.91 | |
| cd02067 | 119 | B12-binding B12 binding domain (B12-BD). This doma | 90.87 | |
| PF01075 | 247 | Glyco_transf_9: Glycosyltransferase family 9 (hept | 90.56 | |
| PRK02261 | 137 | methylaspartate mutase subunit S; Provisional | 90.12 | |
| cd03793 | 590 | GT1_Glycogen_synthase_GSY2_like Glycogen synthase, | 90.07 | |
| COG0003 | 322 | ArsA Predicted ATPase involved in chromosome parti | 89.85 | |
| PF02374 | 305 | ArsA_ATPase: Anion-transporting ATPase; PDB: 2WOO_ | 89.76 | |
| COG4394 | 370 | Uncharacterized protein conserved in bacteria [Fun | 89.45 | |
| COG4370 | 412 | Uncharacterized protein conserved in bacteria [Fun | 89.26 | |
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 89.25 | |
| KOG2941 | 444 | consensus Beta-1,4-mannosyltransferase [Posttransl | 88.98 | |
| COG1618 | 179 | Predicted nucleotide kinase [Nucleotide transport | 87.1 | |
| TIGR02398 | 487 | gluc_glyc_Psyn glucosylglycerol-phosphate synthase | 86.96 | |
| PF00731 | 150 | AIRC: AIR carboxylase; InterPro: IPR000031 Phospho | 86.95 | |
| PF02951 | 119 | GSH-S_N: Prokaryotic glutathione synthetase, N-ter | 86.57 | |
| PRK13931 | 261 | stationary phase survival protein SurE; Provisiona | 86.52 | |
| PF07429 | 360 | Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc | 86.07 | |
| cd01425 | 193 | RPS2 Ribosomal protein S2 (RPS2), involved in form | 84.54 | |
| PRK02797 | 322 | 4-alpha-L-fucosyltransferase; Provisional | 84.46 | |
| COG2894 | 272 | MinD Septum formation inhibitor-activating ATPase | 83.69 | |
| PF02441 | 129 | Flavoprotein: Flavoprotein; InterPro: IPR003382 Th | 82.86 | |
| KOG1250 | 457 | consensus Threonine/serine dehydratases [Amino aci | 82.55 | |
| PRK08057 | 248 | cobalt-precorrin-6x reductase; Reviewed | 81.43 | |
| cd02070 | 201 | corrinoid_protein_B12-BD B12 binding domain of cor | 81.35 | |
| TIGR02370 | 197 | pyl_corrinoid methyltransferase cognate corrinoid | 80.93 | |
| PF02571 | 249 | CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: | 80.34 |
| >PLN02555 limonoid glucosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-64 Score=496.38 Aligned_cols=442 Identities=38% Similarity=0.753 Sum_probs=356.6
Q ss_pred CCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCC-------C---CCCceEEEccCCCCCCCC
Q 012412 10 SCKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDS-------S---SSSIPLEAISDGYDEGGY 79 (464)
Q Consensus 10 ~~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~-------~---~~~~~~~~i~~~~~~~~~ 79 (464)
.+...||+++|++++||++|++.||+.|+.+|..|||++++.+...+.+.. . ...+.|..+|+++++ +.
T Consensus 4 ~~~~~HVv~~PfpaqGHi~Pml~lA~~La~~G~~vT~v~T~~~~~~~~~a~~~~~~~~~~~~~~~i~~~~~pdglp~-~~ 82 (480)
T PLN02555 4 ESSLVHVMLVSFPGQGHVNPLLRLGKLLASKGLLVTFVTTESWGKKMRQANKIQDGVLKPVGDGFIRFEFFEDGWAE-DD 82 (480)
T ss_pred CCCCCEEEEECCcccccHHHHHHHHHHHHhCCCeEEEEeccchhhhhhccccccccccccCCCCeEEEeeCCCCCCC-Cc
Confidence 345679999999999999999999999999999999999997665443100 0 112566667777765 33
Q ss_pred CCccCHHHHHHHHHHhCcHHHHHHHHHhcCCCCCccEEEeCCchhhHHHHHHHcCCccEEEecchHHHHHHHhhhhcCcc
Q 012412 80 AQAESIEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSL 159 (464)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~ 159 (464)
+...+...++..+.......++++++.+..+.+|++|||+|.+..|+..+|+++|||++.|++++++.+..+.++..+..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~pv~ciV~D~~~~wa~~vA~~~gIP~~~F~t~~a~~~~~~~~~~~~~~ 162 (480)
T PLN02555 83 PRRQDLDLYLPQLELVGKREIPNLVKRYAEQGRPVSCLINNPFIPWVCDVAEELGIPSAVLWVQSCACFSAYYHYYHGLV 162 (480)
T ss_pred ccccCHHHHHHHHHHhhhHHHHHHHHHHhccCCCceEEEECCcchHHHHHHHHcCCCeEEeecccHHHHHHHHHHhhcCC
Confidence 32334555666666667777888888765444567999999999999999999999999999999999888877754433
Q ss_pred cCCC---CCCceeCCCCCCCCCCCCCCccccCCCCchHHHHHHHHHhhhccCCcEEEecchhhhhHHHHHHHHhcCCeee
Q 012412 160 ELPL---TGNEILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTWSLRT 236 (464)
Q Consensus 160 ~~p~---~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~ 236 (464)
+.+. .+.++.+|++|.++..+++.+......+......+. +.+....+++++++|||.+||....+.+....+++.
T Consensus 163 ~~~~~~~~~~~~~iPglp~l~~~dlp~~~~~~~~~~~~~~~~~-~~~~~~~~a~~vlvNTf~eLE~~~~~~l~~~~~v~~ 241 (480)
T PLN02555 163 PFPTETEPEIDVQLPCMPLLKYDEIPSFLHPSSPYPFLRRAIL-GQYKNLDKPFCILIDTFQELEKEIIDYMSKLCPIKP 241 (480)
T ss_pred CcccccCCCceeecCCCCCcCHhhCcccccCCCCchHHHHHHH-HHHHhcccCCEEEEEchHHHhHHHHHHHhhCCCEEE
Confidence 3222 123467899998888888876643223334455555 666667788999999999999999988876557999
Q ss_pred ecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEEcC
Q 012412 237 IGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRE 316 (464)
Q Consensus 237 vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~ 316 (464)
|||+.+... +.....+...+. .+.++.+||+.++++++|||||||+...+.+++.+++.+++.++++|||++..
T Consensus 242 iGPl~~~~~-----~~~~~~~~~~~~-~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~~l~~~~~~flW~~~~ 315 (480)
T PLN02555 242 VGPLFKMAK-----TPNSDVKGDISK-PADDCIEWLDSKPPSSVVYISFGTVVYLKQEQIDEIAYGVLNSGVSFLWVMRP 315 (480)
T ss_pred eCcccCccc-----cccccccccccc-cchhHHHHHhCCCCCceeEEEeccccCCCHHHHHHHHHHHHhcCCeEEEEEec
Confidence 999976421 000111222233 24679999999877889999999999899999999999999999999999863
Q ss_pred cc------cCcCChhhhhhccCCCcEEEEeccChHHhhccccccceeccCChhHHHHHHHhCCcEeccCCccchhhHHHH
Q 012412 317 SE------QAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKY 390 (464)
Q Consensus 317 ~~------~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~r 390 (464)
.. ...+|+++.++ .++|+.+++|+||.++|.|.++++||||||+||++||+++|||||++|++.||+.||++
T Consensus 316 ~~~~~~~~~~~lp~~~~~~--~~~~g~v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~ 393 (480)
T PLN02555 316 PHKDSGVEPHVLPEEFLEK--AGDKGKIVQWCPQEKVLAHPSVACFVTHCGWNSTMEALSSGVPVVCFPQWGDQVTDAVY 393 (480)
T ss_pred CcccccchhhcCChhhhhh--cCCceEEEecCCHHHHhCCCccCeEEecCCcchHHHHHHcCCCEEeCCCccccHHHHHH
Confidence 21 12477788777 77899999999999999999999999999999999999999999999999999999999
Q ss_pred HHhHhcceeec------c-CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHhhc
Q 012412 391 ILDVWKTGLKF------P-IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLACSK 461 (464)
Q Consensus 391 l~~~~G~g~~l------~-~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l~~~~ 461 (464)
+++.||+|+.+ . .++.++|.++|+++|.+++|+++|+||++|++.+++++.+|||+...+++||+++..+.
T Consensus 394 ~~~~~gvGv~l~~~~~~~~~v~~~~v~~~v~~vm~~~~g~~~r~ra~~l~~~a~~A~~egGSS~~~l~~~v~~i~~~~ 471 (480)
T PLN02555 394 LVDVFKTGVRLCRGEAENKLITREEVAECLLEATVGEKAAELKQNALKWKEEAEAAVAEGGSSDRNFQEFVDKLVRKS 471 (480)
T ss_pred HHHHhCceEEccCCccccCcCcHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhcc
Confidence 99988999999 2 57899999999999988888899999999999999999999999999999999998763
|
|
| >PLN02173 UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-64 Score=490.02 Aligned_cols=437 Identities=48% Similarity=0.895 Sum_probs=347.3
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEccCCCCCCCCCCccCHHHHHHHH
Q 012412 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGYAQAESIEAYLERF 92 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 92 (464)
+.||+++|++++||++|++.||+.|+.+|+.|||++++.+...+.. ....++++..+|+++++.+.+...++..++..+
T Consensus 5 ~~hvv~~P~paqGHi~P~l~lAk~La~~G~~vT~v~t~~~~~~~~~-~~~~~i~~~~ipdglp~~~~~~~~~~~~~~~~~ 83 (449)
T PLN02173 5 RGHVLAVPFPSQGHITPIRQFCKRLHSKGFKTTHTLTTFIFNTIHL-DPSSPISIATISDGYDQGGFSSAGSVPEYLQNF 83 (449)
T ss_pred CcEEEEecCcccccHHHHHHHHHHHHcCCCEEEEEECCchhhhccc-CCCCCEEEEEcCCCCCCcccccccCHHHHHHHH
Confidence 4699999999999999999999999999999999999977655431 112469999999887762223334466677777
Q ss_pred HHhCcHHHHHHHHHhcCCCCCccEEEeCCchhhHHHHHHHcCCccEEEecchHHHHHHHhhhhcCcccCCCCCCceeCCC
Q 012412 93 WQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNEILLPG 172 (464)
Q Consensus 93 ~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~p~ 172 (464)
...+...++++++.+....+|+||||+|.+..|+..+|+++|||++.|++++++....+.+..... ....+.+|+
T Consensus 84 ~~~~~~~~~~~l~~~~~~~~Pv~cvV~D~f~~Wa~dVA~elgIP~v~F~~~~a~~~~~~~~~~~~~-----~~~~~~~pg 158 (449)
T PLN02173 84 KTFGSKTVADIIRKHQSTDNPITCIVYDSFMPWALDLAREFGLAAAPFFTQSCAVNYINYLSYINN-----GSLTLPIKD 158 (449)
T ss_pred HHhhhHHHHHHHHHhhccCCCceEEEECCcchhHHHHHHHhCCCEEEEechHHHHHHHHHhHHhcc-----CCccCCCCC
Confidence 767778888888876543356799999999999999999999999999998887776655432111 112345889
Q ss_pred CCCCCCCCCCCccccCCCCchHHHHHHHHHhhhccCCcEEEecchhhhhHHHHHHHHhcCCeeeecccCCCccccccccC
Q 012412 173 MPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTWSLRTIGPTIPSFYLDKQIED 252 (464)
Q Consensus 173 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~vgp~~~~~~~~~~~~~ 252 (464)
+|.++..+++.+.............+. +.+....+++.+++|||++||+...+.+....+++.|||+.+..........
T Consensus 159 ~p~l~~~dlp~~~~~~~~~~~~~~~~~-~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~v~~VGPl~~~~~~~~~~~~ 237 (449)
T PLN02173 159 LPLLELQDLPTFVTPTGSHLAYFEMVL-QQFTNFDKADFVLVNSFHDLDLHENELLSKVCPVLTIGPTVPSMYLDQQIKS 237 (449)
T ss_pred CCCCChhhCChhhcCCCCchHHHHHHH-HHHhhhccCCEEEEeCHHHhhHHHHHHHHhcCCeeEEcccCchhhccccccc
Confidence 988888888876643222222344454 5556678889999999999999999888765679999999764211100001
Q ss_pred cccccccccc-cchhHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhcc
Q 012412 253 DKDYGFSMFK-SSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETL 331 (464)
Q Consensus 253 ~~~~~~~~~~-~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 331 (464)
....+..+|. ..++++.+||+.++++++|||||||....+.+++.+++.+| .+.+|+|++.......+|+++.++.
T Consensus 238 ~~~~~~~~~~~~~~~~c~~WLd~~~~~svvyvsfGS~~~~~~~~~~ela~gL--s~~~flWvvr~~~~~~lp~~~~~~~- 314 (449)
T PLN02173 238 DNDYDLNLFDLKEAALCTDWLDKRPQGSVVYIAFGSMAKLSSEQMEEIASAI--SNFSYLWVVRASEESKLPPGFLETV- 314 (449)
T ss_pred cccccccccccccchHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHh--cCCCEEEEEeccchhcccchHHHhh-
Confidence 1111122332 22356899999988889999999999989999999999999 5778999997544445788887762
Q ss_pred CCCcEEEEeccChHHhhccccccceeccCChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeecc--C----cC
Q 012412 332 TSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP--I----VK 405 (464)
Q Consensus 332 ~~~nv~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~--~----~~ 405 (464)
.++|+++++|+||.+||+|+++++||||||+||++||+++|||||++|++.||+.||+++++.||+|+.+. + .+
T Consensus 315 ~~~~~~i~~W~PQ~~iL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~~~~~~~~~ 394 (449)
T PLN02173 315 DKDKSLVLKWSPQLQVLSNKAIGCFMTHCGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKAEKESGIAK 394 (449)
T ss_pred cCCceEEeCCCCHHHHhCCCccceEEecCccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEeecccCCccc
Confidence 26889999999999999999999999999999999999999999999999999999999998778888875 2 58
Q ss_pred HHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHh
Q 012412 406 RDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLAC 459 (464)
Q Consensus 406 ~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l~~ 459 (464)
.++|.++++++|.+++|+++|++|+++++++++++.+||++...+++|++++..
T Consensus 395 ~e~v~~av~~vm~~~~~~~~r~~a~~~~~~a~~Av~~gGSS~~~l~~~v~~~~~ 448 (449)
T PLN02173 395 REEIEFSIKEVMEGEKSKEMKENAGKWRDLAVKSLSEGGSTDININTFVSKIQI 448 (449)
T ss_pred HHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHhcc
Confidence 999999999999988788999999999999999999999999999999999864
|
|
| >PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-62 Score=481.48 Aligned_cols=429 Identities=30% Similarity=0.507 Sum_probs=341.3
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEccCCCCCCCCCCccCHHHHHH
Q 012412 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGYAQAESIEAYLE 90 (464)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 90 (464)
+.+.||+++|++++||++|++.||+.|+.+|+.|||++++.+..... ....++++..+|+++++...+. .....++.
T Consensus 5 ~~~~HVvlvPfpaqGHi~P~l~LAk~La~~G~~VT~v~T~~n~~~~~--~~~~~i~~~~ip~glp~~~~~~-~~~~~~~~ 81 (451)
T PLN02410 5 PARRRVVLVPVPAQGHISPMMQLAKTLHLKGFSITIAQTKFNYFSPS--DDFTDFQFVTIPESLPESDFKN-LGPIEFLH 81 (451)
T ss_pred CCCCEEEEECCCccccHHHHHHHHHHHHcCCCEEEEEeCcccccccc--cCCCCeEEEeCCCCCCcccccc-cCHHHHHH
Confidence 35679999999999999999999999999999999999987642111 1123699999998876522222 23445666
Q ss_pred HHHHhCcHHHHHHHHHhcC-CCCCccEEEeCCchhhHHHHHHHcCCccEEEecchHHHHHHHhhhh---cC-c-ccCCC-
Q 012412 91 RFWQIGPQTLTELVEKMNG-SDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVK---KG-S-LELPL- 163 (464)
Q Consensus 91 ~~~~~~~~~l~~~~~~l~~-~~~p~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~---~~-~-~~~p~- 163 (464)
.+...+...++++++++.. ...|++|||+|.+..|+..+|+++|||++.|++++++.+.++.++. .. . .+.+.
T Consensus 82 ~~~~~~~~~~~~~L~~l~~~~~~p~~cVI~D~f~~Wa~dvA~~lgIP~v~F~t~~a~~~~~~~~~~~~~~~~~~~~~~~~ 161 (451)
T PLN02410 82 KLNKECQVSFKDCLGQLVLQQGNEIACVVYDEFMYFAEAAAKEFKLPNVIFSTTSATAFVCRSVFDKLYANNVLAPLKEP 161 (451)
T ss_pred HHHHHhHHHHHHHHHHHHhccCCCcEEEEECCcchHHHHHHHHcCCCEEEEEccCHHHHHHHHHHHHHHhccCCCCcccc
Confidence 6665667778888877642 2345699999999999999999999999999999998887766541 11 1 12111
Q ss_pred -CCCceeCCCCCCCCCCCCCCccccCCCCchHHHHHHHHHhhhccCCcEEEecchhhhhHHHHHHHHhc--CCeeeeccc
Q 012412 164 -TGNEILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKT--WSLRTIGPT 240 (464)
Q Consensus 164 -~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~--~~~~~vgp~ 240 (464)
.+....+|++|+++..+++..... ........+. ... ...+++++++|||++||+...+.+.+. .++++|||+
T Consensus 162 ~~~~~~~iPg~~~~~~~dlp~~~~~--~~~~~~~~~~-~~~-~~~~~~~vlvNTf~eLE~~~~~~l~~~~~~~v~~vGpl 237 (451)
T PLN02410 162 KGQQNELVPEFHPLRCKDFPVSHWA--SLESIMELYR-NTV-DKRTASSVIINTASCLESSSLSRLQQQLQIPVYPIGPL 237 (451)
T ss_pred ccCccccCCCCCCCChHHCcchhcC--CcHHHHHHHH-HHh-hcccCCEEEEeChHHhhHHHHHHHHhccCCCEEEeccc
Confidence 122345888888777776654321 1112222222 222 346788999999999999999998764 369999999
Q ss_pred CCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEEcCcc--
Q 012412 241 IPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESE-- 318 (464)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~-- 318 (464)
.+.... +.+++. ...++.+||+.++++++|||||||....+.+++.+++.+|+.++.+|+|++....
T Consensus 238 ~~~~~~----------~~~~~~-~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gLe~s~~~FlWv~r~~~~~ 306 (451)
T PLN02410 238 HLVASA----------PTSLLE-ENKSCIEWLNKQKKNSVIFVSLGSLALMEINEVMETASGLDSSNQQFLWVIRPGSVR 306 (451)
T ss_pred ccccCC----------Cccccc-cchHHHHHHHhCCCCcEEEEEccccccCCHHHHHHHHHHHHhcCCCeEEEEccCccc
Confidence 754110 011111 1346789999988889999999999999999999999999999999999997431
Q ss_pred ----cCcCChhhhhhccCCCcEEEEeccChHHhhccccccceeccCChhHHHHHHHhCCcEeccCCccchhhHHHHHHhH
Q 012412 319 ----QAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDV 394 (464)
Q Consensus 319 ----~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~ 394 (464)
...+|++|.++ .++|+.+++|+||.++|+|+++++||||||+||++||+++|||||++|++.||+.||+++++.
T Consensus 307 ~~~~~~~lp~~f~er--~~~~g~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~ 384 (451)
T PLN02410 307 GSEWIESLPKEFSKI--ISGRGYIVKWAPQKEVLSHPAVGGFWSHCGWNSTLESIGEGVPMICKPFSSDQKVNARYLECV 384 (451)
T ss_pred ccchhhcCChhHHHh--ccCCeEEEccCCHHHHhCCCccCeeeecCchhHHHHHHHcCCCEEeccccccCHHHHHHHHHH
Confidence 12478899888 789999999999999999999999999999999999999999999999999999999999988
Q ss_pred hcceeecc-CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHh
Q 012412 395 WKTGLKFP-IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLAC 459 (464)
Q Consensus 395 ~G~g~~l~-~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l~~ 459 (464)
||+|+.+. .++.++|.++|+++|.+++|+++|++|+++++.+++++.+||++..++++|+++++.
T Consensus 385 ~~~G~~~~~~~~~~~v~~av~~lm~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~fv~~~~~ 450 (451)
T PLN02410 385 WKIGIQVEGDLDRGAVERAVKRLMVEEEGEEMRKRAISLKEQLRASVISGGSSHNSLEEFVHFMRT 450 (451)
T ss_pred hCeeEEeCCcccHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHh
Confidence 89999997 899999999999999887788999999999999999999999999999999999864
|
|
| >PLN02562 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-62 Score=478.11 Aligned_cols=427 Identities=27% Similarity=0.489 Sum_probs=336.0
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccC-CCCCCceEEEccCCCCCCCCCCccCHHHHHHH
Q 012412 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRD-SSSSSIPLEAISDGYDEGGYAQAESIEAYLER 91 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 91 (464)
+.||+++|++++||++|++.||+.|+.+|++|||++++.+.+.+... ....+++++.+|++.++ +. ......+...
T Consensus 6 ~~HVVlvPfPaqGHi~PmL~LAk~Las~G~~VT~vtt~~~~~~~~~~~~~~~~i~~v~lp~g~~~-~~--~~~~~~l~~a 82 (448)
T PLN02562 6 RPKIILVPYPAQGHVTPMLKLASAFLSRGFEPVVITPEFIHRRISATLDPKLGITFMSISDGQDD-DP--PRDFFSIENS 82 (448)
T ss_pred CcEEEEEcCccccCHHHHHHHHHHHHhCCCEEEEEeCcchhhhhhhccCCCCCEEEEECCCCCCC-Cc--cccHHHHHHH
Confidence 45999999999999999999999999999999999999876655421 11236999999977654 22 1234444555
Q ss_pred HHHhCcHHHHHHHHHhcCCCCCccEEEeCCchhhHHHHHHHcCCccEEEecchHHHHHHHhhhh----cCcccC---CCC
Q 012412 92 FWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVK----KGSLEL---PLT 164 (464)
Q Consensus 92 ~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~----~~~~~~---p~~ 164 (464)
+...+...++++++++... .|++|||+|.+..|+..+|+++|||++.|++++++.+.++.+.. .+.... |..
T Consensus 83 ~~~~~~~~l~~ll~~l~~~-~pv~cvI~D~~~~w~~~vA~~~giP~~~f~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (448)
T PLN02562 83 MENTMPPQLERLLHKLDED-GEVACMVVDLLASWAIGVADRCGVPVAGFWPVMLAAYRLIQAIPELVRTGLISETGCPRQ 161 (448)
T ss_pred HHHhchHHHHHHHHHhcCC-CCcEEEEECCccHhHHHHHHHhCCCEEEEechhHHHHHHHHHHHHHhhcccccccccccc
Confidence 5556777888888877543 46699999999999999999999999999999888777665442 111111 111
Q ss_pred CCce-eCCCCCCCCCCCCCCccccCCCCchHHHHHHHHHhhhccCCcEEEecchhhhhHHHHHHHHh------cCCeeee
Q 012412 165 GNEI-LLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRK------TWSLRTI 237 (464)
Q Consensus 165 ~~~~-~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~------~~~~~~v 237 (464)
..+. .+|++|.+...+++.+.............+. +.+....+++++++|||.+||+...+.+.. .++++.|
T Consensus 162 ~~~~~~~Pg~~~l~~~dl~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~~~~~v~~i 240 (448)
T PLN02562 162 LEKICVLPEQPLLSTEDLPWLIGTPKARKARFKFWT-RTLERTKSLRWILMNSFKDEEYDDVKNHQASYNNGQNPQILQI 240 (448)
T ss_pred ccccccCCCCCCCChhhCcchhcCCCcchHHHHHHH-HHHhccccCCEEEEcChhhhCHHHHHHHHhhhccccCCCEEEe
Confidence 1122 5788888888888765432222223345555 666677788999999999999977775542 2469999
Q ss_pred cccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccc-cCCHHHHHHHHHHHhhCCCeEEEEEcC
Q 012412 238 GPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFV-ELKAEEMEELAWGLKSSDQHFLWVVRE 316 (464)
Q Consensus 238 gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~-~~~~~~~~~~~~al~~~~~~~i~~~~~ 316 (464)
||+.+... ....+...+.. +.++.+||+.++++++|||||||+. ..+.+++++++.+|++++++|||++..
T Consensus 241 Gpl~~~~~-------~~~~~~~~~~~-~~~c~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~l~~~l~~~g~~fiW~~~~ 312 (448)
T PLN02562 241 GPLHNQEA-------TTITKPSFWEE-DMSCLGWLQEQKPNSVIYISFGSWVSPIGESNVRTLALALEASGRPFIWVLNP 312 (448)
T ss_pred cCcccccc-------cccCCCccccc-hHHHHHHHhcCCCCceEEEEecccccCCCHHHHHHHHHHHHHCCCCEEEEEcC
Confidence 99976521 00001111122 3567799999877889999999986 678999999999999999999999965
Q ss_pred cccCcCChhhhhhccCCCcEEEEeccChHHhhccccccceeccCChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhc
Q 012412 317 SEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWK 396 (464)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G 396 (464)
+....+++++.++ .++|+.+++|+||.++|+|+++++||||||+||++||+++|||||++|++.||+.||+++++.||
T Consensus 313 ~~~~~l~~~~~~~--~~~~~~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g 390 (448)
T PLN02562 313 VWREGLPPGYVER--VSKQGKVVSWAPQLEVLKHQAVGCYLTHCGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWK 390 (448)
T ss_pred CchhhCCHHHHHH--hccCEEEEecCCHHHHhCCCccceEEecCcchhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhC
Confidence 4334578888777 78999999999999999999999999999999999999999999999999999999999987559
Q ss_pred ceeeccCcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 012412 397 TGLKFPIVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLA 458 (464)
Q Consensus 397 ~g~~l~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l~ 458 (464)
+|+.+.+++.++|.++|+++|.|+ +||+||++++++++++ .+|||+...+++||++++
T Consensus 391 ~g~~~~~~~~~~l~~~v~~~l~~~---~~r~~a~~l~~~~~~~-~~gGSS~~nl~~~v~~~~ 448 (448)
T PLN02562 391 IGVRISGFGQKEVEEGLRKVMEDS---GMGERLMKLRERAMGE-EARLRSMMNFTTLKDELK 448 (448)
T ss_pred ceeEeCCCCHHHHHHHHHHHhCCH---HHHHHHHHHHHHHHhc-CCCCCHHHHHHHHHHHhC
Confidence 999988889999999999999886 9999999999999877 667999999999999874
|
|
| >PLN02210 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-61 Score=477.14 Aligned_cols=435 Identities=32% Similarity=0.606 Sum_probs=332.7
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHH--HHhCCCeEEEEeCcccccccccCC-CCCCceEEEccCCCCCCCCCCccCHHH
Q 012412 11 CKLAHCLVLTYPGQGHINPLLQFSRR--LQHKGIKVTLVTTRFFYKSLHRDS-SSSSIPLEAISDGYDEGGYAQAESIEA 87 (464)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~--L~~rGh~V~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~ 87 (464)
.++.||+++|++++||++|++.||+. |+.||++|||++++.+.+.+.... ....+.+..+++++++ +.+ .+...
T Consensus 6 ~~~~hvv~~P~pa~GHi~P~l~La~~L~L~~~G~~VT~v~t~~~~~~~~~~~~~~~~~~~~~~~~glp~-~~~--~~~~~ 82 (456)
T PLN02210 6 GQETHVLMVTLAFQGHINPMLKLAKHLSLSSKNLHFTLATTEQARDLLSTVEKPRRPVDLVFFSDGLPK-DDP--RAPET 82 (456)
T ss_pred CCCCEEEEeCCcccccHHHHHHHHHHHHhhcCCcEEEEEeccchhhhhccccCCCCceEEEECCCCCCC-Ccc--cCHHH
Confidence 34679999999999999999999999 569999999999998876554211 1235777777777766 332 23445
Q ss_pred HHHHHHHhCcHHHHHHHHHhcCCCCCccEEEeCCchhhHHHHHHHcCCccEEEecchHHHHHHHhhhhcCcccCCCC---
Q 012412 88 YLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLT--- 164 (464)
Q Consensus 88 ~~~~~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p~~--- 164 (464)
++..+...+...+++++++ .|+||||+|.+..|+..+|+++|||.+.|++.+++.+.++.+.+....+.+..
T Consensus 83 ~~~~~~~~~~~~l~~~l~~-----~~~~~vI~D~~~~w~~~vA~~lgIP~~~f~~~sa~~~~~~~~~~~~~~~~~~~~~~ 157 (456)
T PLN02210 83 LLKSLNKVGAKNLSKIIEE-----KRYSCIISSPFTPWVPAVAAAHNIPCAILWIQACGAYSVYYRYYMKTNSFPDLEDL 157 (456)
T ss_pred HHHHHHHhhhHHHHHHHhc-----CCCcEEEECCcchhHHHHHHHhCCCEEEEecccHHHHHHHHhhhhccCCCCccccc
Confidence 5555554444444444443 24699999999999999999999999999999988888777653222122221
Q ss_pred CCceeCCCCCCCCCCCCCCccccCCCCchHHHHHHHHHhhhccCCcEEEecchhhhhHHHHHHHHhcCCeeeecccCCCc
Q 012412 165 GNEILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTWSLRTIGPTIPSF 244 (464)
Q Consensus 165 ~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~vgp~~~~~ 244 (464)
.....+|++|.+...+++.+..... ...+...+. +......+.+.+++||+.++|....+.+.+..++++|||+++..
T Consensus 158 ~~~~~~Pgl~~~~~~dl~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~~~~v~~VGPl~~~~ 235 (456)
T PLN02210 158 NQTVELPALPLLEVRDLPSFMLPSG-GAHFNNLMA-EFADCLRYVKWVLVNSFYELESEIIESMADLKPVIPIGPLVSPF 235 (456)
T ss_pred CCeeeCCCCCCCChhhCChhhhcCC-chHHHHHHH-HHHHhcccCCEEEEeCHHHHhHHHHHHHhhcCCEEEEcccCchh
Confidence 1235688888777777776543211 111222222 33334566789999999999999988887655799999997531
Q ss_pred cccccccC-cccccccccccchhHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCC
Q 012412 245 YLDKQIED-DKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLP 323 (464)
Q Consensus 245 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~ 323 (464)
....+... ....+..+|. .+.++.+|++.++++++|||||||....+.+++++++.+|+.++.+|+|++........+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~-~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~e~a~~l~~~~~~flw~~~~~~~~~~~ 314 (456)
T PLN02210 236 LLGDDEEETLDGKNLDMCK-SDDCCMEWLDKQARSSVVYISFGSMLESLENQVETIAKALKNRGVPFLWVIRPKEKAQNV 314 (456)
T ss_pred hcCcccccccccccccccc-cchHHHHHHhCCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEeCCccccch
Confidence 10000000 0111112333 246789999998888999999999998899999999999999999999999753222223
Q ss_pred hhhhhhccC-CCcEEEEeccChHHhhccccccceeccCChhHHHHHHHhCCcEeccCCccchhhHHHHHHh-Hhcceeec
Q 012412 324 KKFSDETLT-SHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILD-VWKTGLKF 401 (464)
Q Consensus 324 ~~~~~~~~~-~~nv~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~-~~G~g~~l 401 (464)
+.+.++ . ++|..+++|+||.++|+|+++++||||||+||++||+++|||||++|++.||+.||+++++ . |+|+.+
T Consensus 315 ~~~~~~--~~~~~g~v~~w~PQ~~iL~h~~vg~FitH~G~nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~-g~G~~l 391 (456)
T PLN02210 315 QVLQEM--VKEGQGVVLEWSPQEKILSHMAISCFVTHCGWNSTIETVVAGVPVVAYPSWTDQPIDARLLVDVF-GIGVRM 391 (456)
T ss_pred hhHHhh--ccCCCeEEEecCCHHHHhcCcCcCeEEeeCCcccHHHHHHcCCCEEecccccccHHHHHHHHHHh-CeEEEE
Confidence 444444 3 4788889999999999999999999999999999999999999999999999999999998 6 999998
Q ss_pred c------CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHh
Q 012412 402 P------IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLAC 459 (464)
Q Consensus 402 ~------~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l~~ 459 (464)
. .++.++|.++|+++|.+++|+++|+||+++++.+++++++|||+...+++|++++..
T Consensus 392 ~~~~~~~~~~~~~l~~av~~~m~~~~g~~~r~~a~~l~~~a~~Av~~gGSS~~~l~~~v~~~~~ 455 (456)
T PLN02210 392 RNDAVDGELKVEEVERCIEAVTEGPAAADIRRRAAELKHVARLALAPGGSSARNLDLFISDITI 455 (456)
T ss_pred eccccCCcCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhc
Confidence 4 489999999999999988788899999999999999999999999999999999864
|
|
| >PLN02152 indole-3-acetate beta-glucosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-61 Score=468.66 Aligned_cols=428 Identities=36% Similarity=0.689 Sum_probs=335.8
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHh-CCCeEEEEeCccc-cccccc-CCCCCCceEEEccCCCCCCCC-CCccCHHHHH
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQH-KGIKVTLVTTRFF-YKSLHR-DSSSSSIPLEAISDGYDEGGY-AQAESIEAYL 89 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~-rGh~V~~~~~~~~-~~~~~~-~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~ 89 (464)
.||+++|++++||++|++.||+.|+. +|+.|||++++.+ ...+.. .....++++..+++++++ +. ........++
T Consensus 4 ~hvv~~P~p~qGHi~P~l~La~~La~~~G~~vT~v~t~~~~~~~~~~~~~~~~~i~~~~i~dglp~-g~~~~~~~~~~~~ 82 (455)
T PLN02152 4 PHFLLVTFPAQGHVNPSLRFARRLIKTTGTRVTFATCLSVIHRSMIPNHNNVENLSFLTFSDGFDD-GVISNTDDVQNRL 82 (455)
T ss_pred cEEEEecCcccccHHHHHHHHHHHhhCCCcEEEEEeccchhhhhhhccCCCCCCEEEEEcCCCCCC-ccccccccHHHHH
Confidence 59999999999999999999999996 7999999999854 222111 111236999999988776 33 2234555666
Q ss_pred HHHHHhCcHHHHHHHHHhcCCCCCccEEEeCCchhhHHHHHHHcCCccEEEecchHHHHHHHhhhhcCcccCCCCCCcee
Q 012412 90 ERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNEIL 169 (464)
Q Consensus 90 ~~~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 169 (464)
..+...+...++++++++.....|++|||+|.+..|+..+|+++|||++.|++++++.+..+++.+... ...+.
T Consensus 83 ~~~~~~~~~~l~~~l~~l~~~~~pv~ciV~D~~~~wa~dvA~~lgIP~~~f~t~~a~~~~~~~~~~~~~------~~~~~ 156 (455)
T PLN02152 83 VNFERNGDKALSDFIEANLNGDSPVTCLIYTILPNWAPKVARRFHLPSVLLWIQPAFVFDIYYNYSTGN------NSVFE 156 (455)
T ss_pred HHHHHhccHHHHHHHHHhhccCCCceEEEECCccHhHHHHHHHhCCCEEEEECccHHHHHHHHHhhccC------CCeee
Confidence 667777788888888887543356799999999999999999999999999999999988877765321 12346
Q ss_pred CCCCCCCCCCCCCCccccCCCCchHHHHHHHHHhhhcc--CCcEEEecchhhhhHHHHHHHHhcCCeeeecccCCCcccc
Q 012412 170 LPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENID--KADWVLCNTFYELEEEVVEWLRKTWSLRTIGPTIPSFYLD 247 (464)
Q Consensus 170 ~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~s~~~l~~~~~~~~~~~~~~~~vgp~~~~~~~~ 247 (464)
+|++|.++..+++.+.........+...+. +...... ..+.+++|||++||....+.+.. .+++.|||+.+.....
T Consensus 157 iPglp~l~~~dlp~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~-~~v~~VGPL~~~~~~~ 234 (455)
T PLN02152 157 FPNLPSLEIRDLPSFLSPSNTNKAAQAVYQ-ELMEFLKEESNPKILVNTFDSLEPEFLTAIPN-IEMVAVGPLLPAEIFT 234 (455)
T ss_pred cCCCCCCchHHCchhhcCCCCchhHHHHHH-HHHHHhhhccCCEEEEeChHHhhHHHHHhhhc-CCEEEEcccCcccccc
Confidence 899988888888876643222222233333 3333332 24689999999999999988865 3799999997642100
Q ss_pred ccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEEcCccc-------C
Q 012412 248 KQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQ-------A 320 (464)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~-------~ 320 (464)
......+..++ ..+.++.+||+.++.+++|||||||....+.+++++++.+|+.++.+|+|++..... .
T Consensus 235 ---~~~~~~~~~~~-~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flWv~r~~~~~~~~~~~~ 310 (455)
T PLN02152 235 ---GSESGKDLSVR-DQSSSYTLWLDSKTESSVIYVSFGTMVELSKKQIEELARALIEGKRPFLWVITDKLNREAKIEGE 310 (455)
T ss_pred ---ccccCcccccc-ccchHHHHHhhCCCCCceEEEEecccccCCHHHHHHHHHHHHHcCCCeEEEEecCcccccccccc
Confidence 00000001111 123579999999888899999999999999999999999999999999999975211 0
Q ss_pred -----cCChhhhhhccCCCcEEEEeccChHHhhccccccceeccCChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHh
Q 012412 321 -----KLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVW 395 (464)
Q Consensus 321 -----~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~ 395 (464)
.++++|.++ .++|+.+.+|+||.++|+|+++++||||||+||++||+++|||||++|++.||+.||+++++.|
T Consensus 311 ~~~~~~~~~~f~e~--~~~~g~v~~W~PQ~~iL~h~~vg~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~ 388 (455)
T PLN02152 311 EETEIEKIAGFRHE--LEEVGMIVSWCSQIEVLRHRAVGCFVTHCGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIW 388 (455)
T ss_pred cccccccchhHHHh--ccCCeEEEeeCCHHHHhCCcccceEEeeCCcccHHHHHHcCCCEEeccccccchHHHHHHHHHh
Confidence 235677777 7899999999999999999999999999999999999999999999999999999999999855
Q ss_pred cceeecc-----CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Q 012412 396 KTGLKFP-----IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASL 457 (464)
Q Consensus 396 G~g~~l~-----~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l 457 (464)
|+|+.+. ..+.++|+++|+++|.|+ +++||+||+++++++++++.+||++..++++||+++
T Consensus 389 ~~G~~~~~~~~~~~~~e~l~~av~~vm~~~-~~~~r~~a~~~~~~~~~a~~~ggsS~~nl~~li~~i 454 (455)
T PLN02152 389 KTGVRVRENSEGLVERGEIRRCLEAVMEEK-SVELRESAEKWKRLAIEAGGEGGSSDKNVEAFVKTL 454 (455)
T ss_pred CceEEeecCcCCcCcHHHHHHHHHHHHhhh-HHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHh
Confidence 6666653 358999999999999754 457999999999999999999999999999999987
|
|
| >PLN02448 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-60 Score=469.36 Aligned_cols=432 Identities=32% Similarity=0.631 Sum_probs=335.8
Q ss_pred CCCCCcEEEEEcCCCccChHHHHHHHHHHHhC--CCeEEEEeCcccccccccCCCCCCceEEEccCCCCCCCCCCccCHH
Q 012412 9 TSCKLAHCLVLTYPGQGHINPLLQFSRRLQHK--GIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGYAQAESIE 86 (464)
Q Consensus 9 ~~~~~~~il~~~~~~~GH~~p~l~la~~L~~r--Gh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 86 (464)
+.....||+++|++++||++|++.||++|+.| ||+|||++++.+.+.+.+.....+++|+.+|++.+. ......+..
T Consensus 6 ~~~~~~hVvlvp~pa~GHi~P~l~LA~~L~~~~~G~~VT~~~t~~~~~~i~~~~~~~gi~fv~lp~~~p~-~~~~~~~~~ 84 (459)
T PLN02448 6 SPTTSCHVVAMPYPGRGHINPMMNLCKLLASRKPDILITFVVTEEWLGLIGSDPKPDNIRFATIPNVIPS-ELVRAADFP 84 (459)
T ss_pred CCCCCcEEEEECCcccccHHHHHHHHHHHHcCCCCcEEEEEeCCchHhHhhccCCCCCEEEEECCCCCCC-ccccccCHH
Confidence 44567899999999999999999999999999 999999999988777763222247999999976555 333233455
Q ss_pred HHHHHHHHhCcHHHHHHHHHhcCCCCCccEEEeCCchhhHHHHHHHcCCccEEEecchHHHHHHHhhhh----cCcccCC
Q 012412 87 AYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVK----KGSLELP 162 (464)
Q Consensus 87 ~~~~~~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~----~~~~~~p 162 (464)
.++..+...+...++++++++. .++||||+|.++.|+..+|+++|||++.+++++++.+..+.++. .+..+.+
T Consensus 85 ~~~~~~~~~~~~~~~~~l~~~~---~~~~~VI~D~~~~wa~~vA~~lgIP~v~f~~~~a~~~~~~~~~~~~~~~~~~~~~ 161 (459)
T PLN02448 85 GFLEAVMTKMEAPFEQLLDRLE---PPVTAIVADTYLFWAVGVGNRRNIPVASLWTMSATFFSVFYHFDLLPQNGHFPVE 161 (459)
T ss_pred HHHHHHHHHhHHHHHHHHHhcC---CCcEEEEECCccHHHHHHHHHhCCCeEEEEhHHHHHHHHHHHhhhhhhccCCCCc
Confidence 5555555455666777777654 35699999999999999999999999999999987777655542 1111211
Q ss_pred C---CCCce-eCCCCCCCCCCCCCCccccCCCCchHHHHHHHHHhhhccCCcEEEecchhhhhHHHHHHHHhc--CCeee
Q 012412 163 L---TGNEI-LLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKT--WSLRT 236 (464)
Q Consensus 163 ~---~~~~~-~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~--~~~~~ 236 (464)
. ....+ .+|+++.+...+++.+.... .....+.+. +.+....+++.+++||+++||+...+.+.+. .+++.
T Consensus 162 ~~~~~~~~~~~iPg~~~l~~~dlp~~~~~~--~~~~~~~~~-~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~~~~~~~~~ 238 (459)
T PLN02448 162 LSESGEERVDYIPGLSSTRLSDLPPIFHGN--SRRVLKRIL-EAFSWVPKAQYLLFTSFYELEAQAIDALKSKFPFPVYP 238 (459)
T ss_pred cccccCCccccCCCCCCCChHHCchhhcCC--chHHHHHHH-HHHhhcccCCEEEEccHHHhhHHHHHHHHhhcCCceEE
Confidence 1 01111 47888777777777654321 223344455 5555667778999999999999888888765 36999
Q ss_pred ecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEEcC
Q 012412 237 IGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRE 316 (464)
Q Consensus 237 vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~ 316 (464)
|||+.+..... .. ..+.. ....+.++.+|++.++++++|||||||....+.+++++++.+|+.++.+|||++.+
T Consensus 239 iGP~~~~~~~~----~~-~~~~~-~~~~~~~~~~wl~~~~~~~vvyvsfGs~~~~~~~~~~~~~~~l~~~~~~~lw~~~~ 312 (459)
T PLN02448 239 IGPSIPYMELK----DN-SSSSN-NEDNEPDYFQWLDSQPEGSVLYVSLGSFLSVSSAQMDEIAAGLRDSGVRFLWVARG 312 (459)
T ss_pred ecCcccccccC----CC-ccccc-cccchhHHHHHHcCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCEEEEEcC
Confidence 99997752110 00 00000 01113578999999888899999999998888999999999999999999998754
Q ss_pred cccCcCChhhhhhccCCCcEEEEeccChHHhhccccccceeccCChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhc
Q 012412 317 SEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWK 396 (464)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G 396 (464)
. ..++.++ .++|+.+++|+||.+||+|+++++||||||+||++||+++|||||++|++.||+.||+++++.||
T Consensus 313 ~-----~~~~~~~--~~~~~~v~~w~pQ~~iL~h~~v~~fvtHgG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g 385 (459)
T PLN02448 313 E-----ASRLKEI--CGDMGLVVPWCDQLKVLCHSSVGGFWTHCGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWK 385 (459)
T ss_pred c-----hhhHhHh--ccCCEEEeccCCHHHHhccCccceEEecCchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhC
Confidence 2 1233333 44789999999999999999999999999999999999999999999999999999999998558
Q ss_pred ceeecc-------CcCHHHHHHHHHHHhcC--CchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHhh
Q 012412 397 TGLKFP-------IVKRDAIADCISEILEG--ERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLACS 460 (464)
Q Consensus 397 ~g~~l~-------~~~~~~l~~~i~~ll~~--~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l~~~ 460 (464)
+|+.+. ..++++|+++++++|.+ ++|+++|++|+++++.+++++.+|||+...+++|+++++.-
T Consensus 386 ~G~~~~~~~~~~~~~~~~~l~~av~~vl~~~~~~~~~~r~~a~~~~~~~~~a~~~gGss~~~l~~~v~~~~~~ 458 (459)
T PLN02448 386 IGWRVKREVGEETLVGREEIAELVKRFMDLESEEGKEMRRRAKELQEICRGAIAKGGSSDTNLDAFIRDISQG 458 (459)
T ss_pred ceEEEecccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcc
Confidence 888874 36899999999999986 35789999999999999999999999999999999998753
|
|
| >PLN02207 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-59 Score=460.55 Aligned_cols=433 Identities=26% Similarity=0.428 Sum_probs=331.0
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCC--CeEEEEeCccccc-cccc----C-CCCCCceEEEccCCCCCCCCCCcc
Q 012412 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKG--IKVTLVTTRFFYK-SLHR----D-SSSSSIPLEAISDGYDEGGYAQAE 83 (464)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~rG--h~V~~~~~~~~~~-~~~~----~-~~~~~~~~~~i~~~~~~~~~~~~~ 83 (464)
++.||+++|+++.||++|++.||+.|+.+| ..|||++++.+.. .+.. . ....+++|..+|+...........
T Consensus 2 ~~~hvv~~P~p~qGHi~P~l~lA~~La~~gg~~~vT~~~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~~~~~~~ 81 (468)
T PLN02207 2 RNAELIFIPTPTVGHLVPFLEFARRLIEQDDRIRITILLMKLQGQSHLDTYVKSIASSQPFVRFIDVPELEEKPTLGGTQ 81 (468)
T ss_pred CCcEEEEeCCcchhhHHHHHHHHHHHHhCCCCeEEEEEEcCCCcchhhHHhhhhccCCCCCeEEEEeCCCCCCCcccccc
Confidence 346999999999999999999999999998 9999999987652 1110 0 112369999999543210101122
Q ss_pred CHHHHHHHHHHhCcH----HHHHHHHHhcCCCCCccEEEeCCchhhHHHHHHHcCCccEEEecchHHHHHHHhhhhcCcc
Q 012412 84 SIEAYLERFWQIGPQ----TLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSL 159 (464)
Q Consensus 84 ~~~~~~~~~~~~~~~----~l~~~~~~l~~~~~p~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~ 159 (464)
+...++..+...... .+.+++++.....+|++|||+|.+..|+..+|+++|||++.|++++++.+.++.+......
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pv~cvV~D~~~~w~~~vA~~~gip~~~f~~~~a~~~~~~~~~~~~~~ 161 (468)
T PLN02207 82 SVEAYVYDVIEKNIPLVRNIVMDILSSLALDGVKVKGFVADFFCLPMIDVAKDVSLPFYVFLTTNSGFLAMMQYLADRHS 161 (468)
T ss_pred CHHHHHHHHHHhcchhHHHHHHHHHHHhccCCCCeEEEEECCcchHHHHHHHHhCCCEEEEECccHHHHHHHHHhhhccc
Confidence 344344333334433 3444444332222456999999999999999999999999999999988887766532211
Q ss_pred c---C--CCCCCceeCCCC-CCCCCCCCCCccccCCCCchHHHHHHHHHhhhccCCcEEEecchhhhhHHHHHHHHh---
Q 012412 160 E---L--PLTGNEILLPGM-PPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRK--- 230 (464)
Q Consensus 160 ~---~--p~~~~~~~~p~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~--- 230 (464)
+ . +..+.++.+|++ |.+...+++.+...... ...+. +......+++.+++||+++||+...+.+..
T Consensus 162 ~~~~~~~~~~~~~~~vPgl~~~l~~~dlp~~~~~~~~----~~~~~-~~~~~~~~~~~vlvNtf~~LE~~~~~~~~~~~~ 236 (468)
T PLN02207 162 KDTSVFVRNSEEMLSIPGFVNPVPANVLPSALFVEDG----YDAYV-KLAILFTKANGILVNSSFDIEPYSVNHFLDEQN 236 (468)
T ss_pred cccccCcCCCCCeEECCCCCCCCChHHCcchhcCCcc----HHHHH-HHHHhcccCCEEEEEchHHHhHHHHHHHHhccC
Confidence 1 1 122234678998 67888888876532111 23344 444566788999999999999988877743
Q ss_pred cCCeeeecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhCCCeE
Q 012412 231 TWSLRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHF 310 (464)
Q Consensus 231 ~~~~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~ 310 (464)
.++++.|||+.+... ...+. ...+ .++++.+||+.++++++|||||||....+.+++++++.+|+.++++|
T Consensus 237 ~p~v~~VGPl~~~~~--~~~~~-----~~~~--~~~~~~~WLd~~~~~sVVyvSfGS~~~~~~~q~~ela~~l~~~~~~f 307 (468)
T PLN02207 237 YPSVYAVGPIFDLKA--QPHPE-----QDLA--RRDELMKWLDDQPEASVVFLCFGSMGRLRGPLVKEIAHGLELCQYRF 307 (468)
T ss_pred CCcEEEecCCccccc--CCCCc-----cccc--hhhHHHHHHhcCCCCcEEEEEeccCcCCCHHHHHHHHHHHHHCCCcE
Confidence 246999999976411 00110 0011 23679999999888899999999999999999999999999999999
Q ss_pred EEEEcCcc---cCcCChhhhhhccCCCcEEEEeccChHHhhccccccceeccCChhHHHHHHHhCCcEeccCCccchhhH
Q 012412 311 LWVVRESE---QAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTN 387 (464)
Q Consensus 311 i~~~~~~~---~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~n 387 (464)
+|++.... .+.+|++|.++ .++|+.+++|+||.++|+|+++++||||||+||++||+++|||||++|++.||+.|
T Consensus 308 lW~~r~~~~~~~~~lp~~f~er--~~~~g~i~~W~PQ~~IL~H~~vg~FvTH~GwnS~~Eai~~GVP~l~~P~~~DQ~~N 385 (468)
T PLN02207 308 LWSLRTEEVTNDDLLPEGFLDR--VSGRGMICGWSPQVEILAHKAVGGFVSHCGWNSIVESLWFGVPIVTWPMYAEQQLN 385 (468)
T ss_pred EEEEeCCCccccccCCHHHHhh--cCCCeEEEEeCCHHHHhcccccceeeecCccccHHHHHHcCCCEEecCccccchhh
Confidence 99997422 23577888888 78999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhHhcceeecc---------CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 012412 388 AKYILDVWKTGLKFP---------IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLA 458 (464)
Q Consensus 388 a~rl~~~~G~g~~l~---------~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l~ 458 (464)
|+++++.||+|+.+. ..+.++|.++|+++|.+ ++++||+||+++++.+++++.+|||+...+++|++++.
T Consensus 386 a~~~~~~~gvGv~~~~~~~~~~~~~v~~e~i~~av~~vm~~-~~~~~r~~a~~l~~~a~~A~~~GGSS~~~l~~~v~~~~ 464 (468)
T PLN02207 386 AFLMVKELKLAVELKLDYRVHSDEIVNANEIETAIRCVMNK-DNNVVRKRVMDISQMIQRATKNGGSSFAAIEKFIHDVI 464 (468)
T ss_pred HHHHHHHhCceEEEecccccccCCcccHHHHHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Confidence 998887339998652 35899999999999973 35699999999999999999999999999999999997
Q ss_pred hhc
Q 012412 459 CSK 461 (464)
Q Consensus 459 ~~~ 461 (464)
.-+
T Consensus 465 ~~~ 467 (468)
T PLN02207 465 GIK 467 (468)
T ss_pred hcc
Confidence 643
|
|
| >PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-60 Score=466.28 Aligned_cols=438 Identities=27% Similarity=0.400 Sum_probs=329.7
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCC-CCCCceEEEccC----CCCCCCCCCccCH
Q 012412 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDS-SSSSIPLEAISD----GYDEGGYAQAESI 85 (464)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~-~~~~~~~~~i~~----~~~~~~~~~~~~~ 85 (464)
.++.||+++|++++||++|++.||+.|+.+|+.|||++++.+...+.... ...++++..+|. ++++ +.+....+
T Consensus 7 ~~~~HVvl~PfpaqGHi~P~l~LAk~La~~G~~VTfv~T~~n~~~~~~~~~~~~~i~~~~lp~P~~~~lPd-G~~~~~~~ 85 (477)
T PLN02863 7 PAGTHVLVFPFPAQGHMIPLLDLTHRLALRGLTITVLVTPKNLPFLNPLLSKHPSIETLVLPFPSHPSIPS-GVENVKDL 85 (477)
T ss_pred CCCCEEEEecCcccchHHHHHHHHHHHHhCCCEEEEEeCCCcHHHHhhhcccCCCeeEEeCCCCCcCCCCC-CCcChhhc
Confidence 34689999999999999999999999999999999999998876655321 123577766541 3443 33322221
Q ss_pred ----HHHHHHHHHhCcHHHHHHHHHhcCCCCCccEEEeCCchhhHHHHHHHcCCccEEEecchHHHHHHHhhhhcCcccC
Q 012412 86 ----EAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLEL 161 (464)
Q Consensus 86 ----~~~~~~~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~ 161 (464)
...+..........+.+++++. ..|++|||+|.+..|+..+|+++|||++.|++++++.+..+.+++......
T Consensus 86 ~~~~~~~~~~a~~~~~~~~~~~l~~~---~~~p~cvI~D~f~~Wa~dVA~e~GIP~~~F~t~sA~~~~~~~~~~~~~~~~ 162 (477)
T PLN02863 86 PPSGFPLMIHALGELYAPLLSWFRSH---PSPPVAIISDMFLGWTQNLACQLGIRRFVFSPSGAMALSIMYSLWREMPTK 162 (477)
T ss_pred chhhHHHHHHHHHHhHHHHHHHHHhC---CCCCeEEEEcCchHhHHHHHHHcCCCEEEEeccCHHHHHHHHHHhhccccc
Confidence 1122222223344444555443 135599999999999999999999999999999999999888875432111
Q ss_pred --CCC-CCce---eCCCCCCCCCCCCCCccccCCCCchHHHHHHHHHhhhccCCcEEEecchhhhhHHHHHHHHhc---C
Q 012412 162 --PLT-GNEI---LLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKT---W 232 (464)
Q Consensus 162 --p~~-~~~~---~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~---~ 232 (464)
+.+ .... .+|++|.++..+++.++............+. +.+.....++++++|||++||+...+.+... .
T Consensus 163 ~~~~~~~~~~~~~~iPg~~~~~~~dlp~~~~~~~~~~~~~~~~~-~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~ 241 (477)
T PLN02863 163 INPDDQNEILSFSKIPNCPKYPWWQISSLYRSYVEGDPAWEFIK-DSFRANIASWGLVVNSFTELEGIYLEHLKKELGHD 241 (477)
T ss_pred ccccccccccccCCCCCCCCcChHhCchhhhccCccchHHHHHH-HHHhhhccCCEEEEecHHHHHHHHHHHHHhhcCCC
Confidence 111 1111 4788888888888765542222222334444 4444455677899999999999999988764 4
Q ss_pred CeeeecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhCCCeEEE
Q 012412 233 SLRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLW 312 (464)
Q Consensus 233 ~~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~ 312 (464)
+++.|||+.+..... . .....|...+. .++++.+||+.++++++|||||||....+.+++.+++.+|++++++|||
T Consensus 242 ~v~~IGPL~~~~~~~-~--~~~~~~~~~~~-~~~~~~~WLd~~~~~svVyvsfGS~~~~~~~~~~ela~gL~~~~~~flw 317 (477)
T PLN02863 242 RVWAVGPILPLSGEK-S--GLMERGGPSSV-SVDDVMTWLDTCEDHKVVYVCFGSQVVLTKEQMEALASGLEKSGVHFIW 317 (477)
T ss_pred CeEEeCCCccccccc-c--cccccCCcccc-cHHHHHHHHhcCCCCceEEEEeeceecCCHHHHHHHHHHHHhCCCcEEE
Confidence 699999997641100 0 00011211111 2467999999988889999999999988999999999999999999999
Q ss_pred EEcCcc-----cCcCChhhhhhccCCCcEEEEeccChHHhhccccccceeccCChhHHHHHHHhCCcEeccCCccchhhH
Q 012412 313 VVRESE-----QAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTN 387 (464)
Q Consensus 313 ~~~~~~-----~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~n 387 (464)
+++... ...+++++.++. ...++++.+|+||.++|+|.++++||||||+||++||+++|||||++|++.||+.|
T Consensus 318 ~~~~~~~~~~~~~~lp~~~~~r~-~~~g~~v~~w~PQ~~vL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~n 396 (477)
T PLN02863 318 CVKEPVNEESDYSNIPSGFEDRV-AGRGLVIRGWAPQVAILSHRAVGAFLTHCGWNSVLEGLVAGVPMLAWPMAADQFVN 396 (477)
T ss_pred EECCCcccccchhhCCHHHHHHh-ccCCEEecCCCCHHHHhcCCCcCeEEecCCchHHHHHHHcCCCEEeCCccccchhh
Confidence 997432 124777776663 24577788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhHhcceeecc-----CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHhh
Q 012412 388 AKYILDVWKTGLKFP-----IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLACS 460 (464)
Q Consensus 388 a~rl~~~~G~g~~l~-----~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l~~~ 460 (464)
|+++++.||+|+.+. ..+.+++.+++++++.+ +++||+||+++++.+++++.+||++..++++|++++...
T Consensus 397 a~~v~~~~gvG~~~~~~~~~~~~~~~v~~~v~~~m~~--~~~~r~~a~~l~e~a~~Av~~gGSS~~~l~~~v~~i~~~ 472 (477)
T PLN02863 397 ASLLVDELKVAVRVCEGADTVPDSDELARVFMESVSE--NQVERERAKELRRAALDAIKERGSSVKDLDGFVKHVVEL 472 (477)
T ss_pred HHHHHHhhceeEEeccCCCCCcCHHHHHHHHHHHhhc--cHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHh
Confidence 999875449999983 35899999999999942 259999999999999999999999999999999999765
|
|
| >PLN02992 coniferyl-alcohol glucosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-59 Score=459.01 Aligned_cols=420 Identities=26% Similarity=0.452 Sum_probs=325.8
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHH-hCCCeEEEEeCcccccccccC-CCCCCceEEEccC----CCCCCCCCCccCHH
Q 012412 13 LAHCLVLTYPGQGHINPLLQFSRRLQ-HKGIKVTLVTTRFFYKSLHRD-SSSSSIPLEAISD----GYDEGGYAQAESIE 86 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~-~rGh~V~~~~~~~~~~~~~~~-~~~~~~~~~~i~~----~~~~~~~~~~~~~~ 86 (464)
+.||+++|++++||++|++.||+.|+ .+|++|||++++.+...+.+. ....++.+..+|. ++++ ...+..
T Consensus 5 ~pHVvl~P~paqGHi~P~l~LAk~La~~~g~~vT~v~t~~n~~~~~~~~~~~~~i~~~~lp~p~~~glp~----~~~~~~ 80 (481)
T PLN02992 5 KPHAAMFSSPGMGHVIPVIELGKRLSANHGFHVTVFVLETDAASAQSKFLNSTGVDIVGLPSPDISGLVD----PSAHVV 80 (481)
T ss_pred CcEEEEeCCcccchHHHHHHHHHHHHhCCCcEEEEEeCCCchhhhhhccccCCCceEEECCCccccCCCC----CCccHH
Confidence 35999999999999999999999998 789999999999776544211 1123688988884 2221 111222
Q ss_pred HHHHHHHHhCcHHHHHHHHHhcCCCCCccEEEeCCchhhHHHHHHHcCCccEEEecchHHHHHHHhhhhc--CcccCC--
Q 012412 87 AYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKK--GSLELP-- 162 (464)
Q Consensus 87 ~~~~~~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~--~~~~~p-- 162 (464)
..+..+.......++++++++. .+++|||+|.++.|+..+|+++|||++.|++++++.++++.+... .....+
T Consensus 81 ~~~~~~~~~~~~~~~~~l~~~~---~~p~cvV~D~f~~Wa~dVA~elgIP~v~F~t~sA~~~~~~~~~~~~~~~~~~~~~ 157 (481)
T PLN02992 81 TKIGVIMREAVPTLRSKIAEMH---QKPTALIVDLFGTDALCLGGEFNMLTYIFIASNARFLGVSIYYPTLDKDIKEEHT 157 (481)
T ss_pred HHHHHHHHHhHHHHHHHHHhcC---CCCeEEEECCcchhHHHHHHHcCCCEEEEecCcHHHHHHHHhhhhhccccccccc
Confidence 2333333344556667766642 245999999999999999999999999999999888766554421 111110
Q ss_pred CCCCceeCCCCCCCCCCCCCCccccCCCCchHHHHHHHHHhhhccCCcEEEecchhhhhHHHHHHHHhc--------CCe
Q 012412 163 LTGNEILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKT--------WSL 234 (464)
Q Consensus 163 ~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~--------~~~ 234 (464)
....+..+|++|.++..+++..+... .......+. +......+++++++|||.+||....+.+... .++
T Consensus 158 ~~~~~~~iPg~~~l~~~dlp~~~~~~--~~~~~~~~~-~~~~~~~~a~gvlvNTf~eLE~~~l~~l~~~~~~~~~~~~~v 234 (481)
T PLN02992 158 VQRKPLAMPGCEPVRFEDTLDAYLVP--DEPVYRDFV-RHGLAYPKADGILVNTWEEMEPKSLKSLQDPKLLGRVARVPV 234 (481)
T ss_pred cCCCCcccCCCCccCHHHhhHhhcCC--CcHHHHHHH-HHHHhcccCCEEEEechHHHhHHHHHHHhhccccccccCCce
Confidence 01124568888887777777533221 112334445 5555667889999999999999999887542 479
Q ss_pred eeecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEE
Q 012412 235 RTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVV 314 (464)
Q Consensus 235 ~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~ 314 (464)
+.|||+++... + ...+.++.+||+.++++++|||||||....+.+++++++.+|+.++.+|+|++
T Consensus 235 ~~VGPl~~~~~-----~----------~~~~~~c~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flW~~ 299 (481)
T PLN02992 235 YPIGPLCRPIQ-----S----------SKTDHPVLDWLNKQPNESVLYISFGSGGSLSAKQLTELAWGLEMSQQRFVWVV 299 (481)
T ss_pred EEecCccCCcC-----C----------CcchHHHHHHHHcCCCCceEEEeecccccCCHHHHHHHHHHHHHcCCCEEEEE
Confidence 99999976411 0 01246689999998888999999999999999999999999999999999999
Q ss_pred cCc------------------c--cCcCChhhhhhccCCCcEEEEeccChHHhhccccccceeccCChhHHHHHHHhCCc
Q 012412 315 RES------------------E--QAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVP 374 (464)
Q Consensus 315 ~~~------------------~--~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP 374 (464)
... . .+.+|++|.+++ ...++.+.+|+||.++|+|+++++||||||+||++||+++|||
T Consensus 300 r~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~f~eR~-~~rg~vv~~W~PQ~~iL~h~~vg~FitH~G~nS~~Eal~~GVP 378 (481)
T PLN02992 300 RPPVDGSACSAYFSANGGETRDNTPEYLPEGFVSRT-HDRGFVVPSWAPQAEILAHQAVGGFLTHCGWSSTLESVVGGVP 378 (481)
T ss_pred eCCcccccccccccCcccccccchhhhCCHHHHHHh-cCCCEEEeecCCHHHHhCCcccCeeEecCchhHHHHHHHcCCC
Confidence 521 0 124677777773 2345677799999999999999999999999999999999999
Q ss_pred EeccCCccchhhHHHHHH-hHhcceeecc----CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHH--cCCCcH
Q 012412 375 MVAMPQWSDQSTNAKYIL-DVWKTGLKFP----IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVA--KGGSSD 447 (464)
Q Consensus 375 ~v~~P~~~DQ~~na~rl~-~~~G~g~~l~----~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~--~gg~~~ 447 (464)
||++|++.||+.||++++ ++ |+|+.++ .++.++|.++|+++|.+++|+++|++++++++.+++++. +|||+.
T Consensus 379 ~l~~P~~~DQ~~na~~~~~~~-g~gv~~~~~~~~~~~~~l~~av~~vm~~~~g~~~r~~a~~~~~~a~~Av~~~~GGSS~ 457 (481)
T PLN02992 379 MIAWPLFAEQNMNAALLSDEL-GIAVRSDDPKEVISRSKIEALVRKVMVEEEGEEMRRKVKKLRDTAEMSLSIDGGGVAH 457 (481)
T ss_pred EEecCccchhHHHHHHHHHHh-CeeEEecCCCCcccHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhcCCCCCchH
Confidence 999999999999999995 77 9999996 389999999999999988788999999999999999995 599999
Q ss_pred HHHHHHHHHHHh
Q 012412 448 SNIDEFVASLAC 459 (464)
Q Consensus 448 ~~~~~~~~~l~~ 459 (464)
..+++|++++..
T Consensus 458 ~~l~~~v~~~~~ 469 (481)
T PLN02992 458 ESLCRVTKECQR 469 (481)
T ss_pred HHHHHHHHHHHH
Confidence 999999998754
|
|
| >PLN03007 UDP-glucosyltransferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-59 Score=462.72 Aligned_cols=436 Identities=28% Similarity=0.511 Sum_probs=319.6
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCC-----C----CCceEEEcc---CCCCCCC
Q 012412 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSS-----S----SSIPLEAIS---DGYDEGG 78 (464)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~-----~----~~~~~~~i~---~~~~~~~ 78 (464)
++++||+++|+++.||++|++.||+.|+.||++|||++++.+.+.+.+... . -.+...++| .++++ +
T Consensus 3 ~~~~hVvlvp~pa~GHi~P~L~LAk~L~~rG~~VT~vtt~~~~~~i~~~~a~~~~~~~~~~~~~~~~~~p~~~~glP~-g 81 (482)
T PLN03007 3 HEKLHILFFPFMAHGHMIPTLDMAKLFSSRGAKSTILTTPLNAKIFEKPIEAFKNLNPGLEIDIQIFNFPCVELGLPE-G 81 (482)
T ss_pred CCCcEEEEECCCccccHHHHHHHHHHHHhCCCEEEEEECCCchhhhhhhhhhhcccCCCCcceEEEeeCCCCcCCCCC-C
Confidence 345799999999999999999999999999999999999988765542100 1 134445555 34544 3
Q ss_pred CCCcc--------CHHHHHHHHHHhCcHHHHHHHHHhcCCCCCccEEEeCCchhhHHHHHHHcCCccEEEecchHHHHHH
Q 012412 79 YAQAE--------SIEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYI 150 (464)
Q Consensus 79 ~~~~~--------~~~~~~~~~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~ 150 (464)
.+... ....++..+. .....+.+.++++.++. ++||||+|.++.|+..+|+++|||++.|++++++....
T Consensus 82 ~e~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~l~~~-~~~~IV~D~~~~w~~~vA~~lgIP~v~f~~~~a~~~~~ 159 (482)
T PLN03007 82 CENVDFITSNNNDDSGDLFLKFL-FSTKYFKDQLEKLLETT-RPDCLVADMFFPWATEAAEKFGVPRLVFHGTGYFSLCA 159 (482)
T ss_pred cccccccccccccchHHHHHHHH-HHHHHHHHHHHHHHhcC-CCCEEEECCcchhHHHHHHHhCCCeEEeecccHHHHHH
Confidence 22211 1223333333 22334555555554443 45999999999999999999999999999988877666
Q ss_pred HhhhhcCc--ccCCCCCCceeCCCCCC---CCCCCCCCccccCCCCchHHHHHHHHHhhhccCCcEEEecchhhhhHHHH
Q 012412 151 YYHVKKGS--LELPLTGNEILLPGMPP---LEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVV 225 (464)
Q Consensus 151 ~~~~~~~~--~~~p~~~~~~~~p~~p~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~ 225 (464)
+...+... ...+.......+|++|. +...+++.. .....+...+. .......+.+.+++||+++||....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~pg~p~~~~~~~~~~~~~----~~~~~~~~~~~-~~~~~~~~~~~vl~Nt~~~le~~~~ 234 (482)
T PLN03007 160 SYCIRVHKPQKKVASSSEPFVIPDLPGDIVITEEQINDA----DEESPMGKFMK-EVRESEVKSFGVLVNSFYELESAYA 234 (482)
T ss_pred HHHHHhcccccccCCCCceeeCCCCCCccccCHHhcCCC----CCchhHHHHHH-HHHhhcccCCEEEEECHHHHHHHHH
Confidence 55442211 11111112334777763 222222221 11122333333 4444567788999999999999888
Q ss_pred HHHHhc--CCeeeecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHH
Q 012412 226 EWLRKT--WSLRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGL 303 (464)
Q Consensus 226 ~~~~~~--~~~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al 303 (464)
+.+.+. .++++|||+.+.... .......+... ...+.++.+|++.++++++|||||||....+.+.+.+++.+|
T Consensus 235 ~~~~~~~~~~~~~VGPl~~~~~~---~~~~~~~~~~~-~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~~~~l 310 (482)
T PLN03007 235 DFYKSFVAKRAWHIGPLSLYNRG---FEEKAERGKKA-NIDEQECLKWLDSKKPDSVIYLSFGSVASFKNEQLFEIAAGL 310 (482)
T ss_pred HHHHhccCCCEEEEccccccccc---cccccccCCcc-ccchhHHHHHHhcCCCCceEEEeecCCcCCCHHHHHHHHHHH
Confidence 888754 369999998653110 00000001111 112467899999988899999999999888899999999999
Q ss_pred hhCCCeEEEEEcCcc-----cCcCChhhhhhccCCCcEEEEeccChHHhhccccccceeccCChhHHHHHHHhCCcEecc
Q 012412 304 KSSDQHFLWVVRESE-----QAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAM 378 (464)
Q Consensus 304 ~~~~~~~i~~~~~~~-----~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~ 378 (464)
+.++++|+|+++... ...+|++|.++. .+.|+.+.+|+||.++|+|+++++||||||+||++||+++|||||++
T Consensus 311 ~~~~~~flw~~~~~~~~~~~~~~lp~~~~~r~-~~~g~~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GVP~v~~ 389 (482)
T PLN03007 311 EGSGQNFIWVVRKNENQGEKEEWLPEGFEERT-KGKGLIIRGWAPQVLILDHQATGGFVTHCGWNSLLEGVAAGLPMVTW 389 (482)
T ss_pred HHCCCCEEEEEecCCcccchhhcCCHHHHHHh-ccCCEEEecCCCHHHHhccCccceeeecCcchHHHHHHHcCCCeeec
Confidence 999999999997531 124777887764 36788889999999999999999999999999999999999999999
Q ss_pred CCccchhhHHHHHHhHhcceeec--------c--CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHcCCCcHH
Q 012412 379 PQWSDQSTNAKYILDVWKTGLKF--------P--IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDS 448 (464)
Q Consensus 379 P~~~DQ~~na~rl~~~~G~g~~l--------~--~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~ 448 (464)
|++.||+.||+++++.|++|+.+ + .++.++|.++|+++|.+++|++||++|+++++.+++++.+||+++.
T Consensus 390 P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~l~~av~~~m~~~~~~~~r~~a~~~~~~a~~a~~~gGsS~~ 469 (482)
T PLN03007 390 PVGAEQFYNEKLVTQVLRTGVSVGAKKLVKVKGDFISREKVEKAVREVIVGEEAEERRLRAKKLAEMAKAAVEEGGSSFN 469 (482)
T ss_pred cchhhhhhhHHHHHHhhcceeEeccccccccccCcccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhCCCcHHH
Confidence 99999999999887543444432 3 5799999999999999988889999999999999999999999999
Q ss_pred HHHHHHHHHHh
Q 012412 449 NIDEFVASLAC 459 (464)
Q Consensus 449 ~~~~~~~~l~~ 459 (464)
.+++|++++..
T Consensus 470 ~l~~~v~~~~~ 480 (482)
T PLN03007 470 DLNKFMEELNS 480 (482)
T ss_pred HHHHHHHHHHh
Confidence 99999999875
|
|
| >PLN02534 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-59 Score=456.77 Aligned_cols=434 Identities=27% Similarity=0.497 Sum_probs=325.2
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCC-----CCCCceEEEcc-----CCCCCCCCCC
Q 012412 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDS-----SSSSIPLEAIS-----DGYDEGGYAQ 81 (464)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~-----~~~~~~~~~i~-----~~~~~~~~~~ 81 (464)
++.||+++|++++||++|++.||+.|+.+|+.|||++++.+...+.... ....++|+.+| +++++ +.+.
T Consensus 7 ~~~Hvv~vPfpaqGHi~P~l~LAk~La~~G~~vT~v~t~~n~~~~~~~~~~~~~~~~~i~~~~lp~p~~~dglp~-~~~~ 85 (491)
T PLN02534 7 KQLHFVLIPLMAQGHMIPMIDMARLLAERGVIVSLVTTPQNASRFAKTIDRARESGLPIRLVQIPFPCKEVGLPI-GCEN 85 (491)
T ss_pred CCCEEEEECCCCcchHHHHHHHHHHHHhCCCeEEEEECCCcHHHHhhhhhhccccCCCeEEEEcCCCCccCCCCC-Cccc
Confidence 4579999999999999999999999999999999999998765444211 11248899887 46655 3322
Q ss_pred ccC--HHHHHHHHHH---hCcHHHHHHHHHhcCCCCCccEEEeCCchhhHHHHHHHcCCccEEEecchHHHHHHHhhhh-
Q 012412 82 AES--IEAYLERFWQ---IGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVK- 155 (464)
Q Consensus 82 ~~~--~~~~~~~~~~---~~~~~l~~~~~~l~~~~~p~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~- 155 (464)
... ...++..+.. .....++++++.. .+|+||||+|.+..|+..+|+++|||++.|++++++....+..++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~l~~~l~~lL~~~---~~pp~cIV~D~f~~Wa~dVA~~lgIP~v~F~t~~a~~~~~~~~~~~ 162 (491)
T PLN02534 86 LDTLPSRDLLRKFYDAVDKLQQPLERFLEQA---KPPPSCIISDKCLSWTSKTAQRFNIPRIVFHGMCCFSLLSSHNIRL 162 (491)
T ss_pred cccCCcHHHHHHHHHHHHHhHHHHHHHHHhc---CCCCcEEEECCccHHHHHHHHHhCCCeEEEecchHHHHHHHHHHHH
Confidence 221 1123333322 2334455555432 245699999999999999999999999999999988877654332
Q ss_pred -cCcccCCCCCCceeCCCCCC---CCCCCCCCccccCCCCchHHHHHHHHHhhh-ccCCcEEEecchhhhhHHHHHHHHh
Q 012412 156 -KGSLELPLTGNEILLPGMPP---LEPQDMPSFIHDLGSYPAVSYMMMKFQFEN-IDKADWVLCNTFYELEEEVVEWLRK 230 (464)
Q Consensus 156 -~~~~~~p~~~~~~~~p~~p~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~s~~~l~~~~~~~~~~ 230 (464)
....+.+.+..++.+|++|. +...+++........ ...+. ..+.. ...++++++|||.+||+...+.+..
T Consensus 163 ~~~~~~~~~~~~~~~iPg~p~~~~l~~~dlp~~~~~~~~----~~~~~-~~~~~~~~~a~~vlvNTf~eLE~~~l~~l~~ 237 (491)
T PLN02534 163 HNAHLSVSSDSEPFVVPGMPQSIEITRAQLPGAFVSLPD----LDDVR-NKMREAESTAFGVVVNSFNELEHGCAEAYEK 237 (491)
T ss_pred hcccccCCCCCceeecCCCCccccccHHHCChhhcCccc----HHHHH-HHHHhhcccCCEEEEecHHHhhHHHHHHHHh
Confidence 11222333345667899874 555566654322111 12233 33332 2456799999999999999988876
Q ss_pred c--CCeeeecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhCCC
Q 012412 231 T--WSLRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQ 308 (464)
Q Consensus 231 ~--~~~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~ 308 (464)
. .+++.|||+.+..... .+..........+..++..||+.++++++|||||||.....++++.+++.+|+.++.
T Consensus 238 ~~~~~v~~VGPL~~~~~~~----~~~~~~~~~~~~~~~~cl~wLd~~~~~sVvyvsfGS~~~~~~~q~~e~a~gl~~~~~ 313 (491)
T PLN02534 238 AIKKKVWCVGPVSLCNKRN----LDKFERGNKASIDETQCLEWLDSMKPRSVIYACLGSLCRLVPSQLIELGLGLEASKK 313 (491)
T ss_pred hcCCcEEEECccccccccc----ccccccCCccccchHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHhCCC
Confidence 4 3699999997531100 000000001111235689999998888999999999999999999999999999999
Q ss_pred eEEEEEcCccc-----C-cCChhhhhhccCCCcEEEEeccChHHhhccccccceeccCChhHHHHHHHhCCcEeccCCcc
Q 012412 309 HFLWVVRESEQ-----A-KLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWS 382 (464)
Q Consensus 309 ~~i~~~~~~~~-----~-~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~ 382 (464)
+|+|++..... . .+|++|.+++ .+.++.+.+|+||.++|+|+++++||||||+||++||+++|||||++|++.
T Consensus 314 ~flW~~r~~~~~~~~~~~~~p~gf~~~~-~~~g~~v~~w~pq~~iL~h~~v~~fvtH~G~ns~~ea~~~GvP~v~~P~~~ 392 (491)
T PLN02534 314 PFIWVIKTGEKHSELEEWLVKENFEERI-KGRGLLIKGWAPQVLILSHPAIGGFLTHCGWNSTIEGICSGVPMITWPLFA 392 (491)
T ss_pred CEEEEEecCccccchhhhcCchhhHHhh-ccCCeeccCCCCHHHHhcCCccceEEecCccHHHHHHHHcCCCEEeccccc
Confidence 99999974211 1 3567776652 256777889999999999999999999999999999999999999999999
Q ss_pred chhhHHHHHHhHhcceeecc---------------CcCHHHHHHHHHHHhc--CCchHHHHHHHHHHHHHHHHHHHcCCC
Q 012412 383 DQSTNAKYILDVWKTGLKFP---------------IVKRDAIADCISEILE--GERGKELRRNAGKWRKLAKEAVAKGGS 445 (464)
Q Consensus 383 DQ~~na~rl~~~~G~g~~l~---------------~~~~~~l~~~i~~ll~--~~~~~~~~~~a~~l~~~~~~~~~~gg~ 445 (464)
||+.||+++++.||+|+.+. ..+.++|.++|+++|. +++|+++|+||++|++.+++++.+|||
T Consensus 393 dq~~na~~~~e~~~vGv~~~~~~~~~~~~~~~~~~~v~~eev~~~v~~~m~~~~eeg~~~R~rA~elk~~a~~Av~~GGS 472 (491)
T PLN02534 393 EQFLNEKLIVEVLRIGVRVGVEVPVRWGDEERVGVLVKKDEVEKAVKTLMDDGGEEGERRRRRAQELGVMARKAMELGGS 472 (491)
T ss_pred cHHHHHHHHHHhhcceEEecccccccccccccccCccCHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 99999999998889998763 1688999999999997 456789999999999999999999999
Q ss_pred cHHHHHHHHHHHHh
Q 012412 446 SDSNIDEFVASLAC 459 (464)
Q Consensus 446 ~~~~~~~~~~~l~~ 459 (464)
+...+++||++|..
T Consensus 473 S~~nl~~fv~~i~~ 486 (491)
T PLN02534 473 SHINLSILIQDVLK 486 (491)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999974
|
|
| >PLN00164 glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-58 Score=458.42 Aligned_cols=427 Identities=24% Similarity=0.438 Sum_probs=330.1
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCC----CeEEEEeCccccc----ccccC-----CCCCCceEEEccCCCCCCC
Q 012412 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKG----IKVTLVTTRFFYK----SLHRD-----SSSSSIPLEAISDGYDEGG 78 (464)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~rG----h~V~~~~~~~~~~----~~~~~-----~~~~~~~~~~i~~~~~~~~ 78 (464)
.+.||+++|++++||++|++.||+.|+.+| +.|||++++.+.. .+... ....++.+..+|++..+.+
T Consensus 2 ~~~HVVlvPfpaqGHi~P~l~LAk~La~~g~~~~~~vT~~~t~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~p~~ 81 (480)
T PLN00164 2 AAPTVVLLPVWGSGHLMSMLEAGKRLLASSGGGALSLTVLVMPPPTPESASEVAAHVRREAASGLDIRFHHLPAVEPPTD 81 (480)
T ss_pred CCCEEEEeCCcchhHHHHHHHHHHHHHhCCCCCcEEEEEEEcCCCccchhHHHHHHHhhcccCCCCEEEEECCCCCCCCc
Confidence 345999999999999999999999999996 7999999876432 11110 0112589999986643212
Q ss_pred CCCccCHHHHHHHHHHhCcHHHHHHHHHhcCCCCCccEEEeCCchhhHHHHHHHcCCccEEEecchHHHHHHHhhhhcC-
Q 012412 79 YAQAESIEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKG- 157 (464)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~- 157 (464)
. .+...++..+...+...++++++.+. .|++|||+|.+..|+..+|+++|||++.|++++++.+.++.++...
T Consensus 82 ~---e~~~~~~~~~~~~~~~~l~~~L~~l~---~pv~cIV~D~f~~Wa~dVA~elgIP~v~F~t~sA~~~~~~~~~~~~~ 155 (480)
T PLN00164 82 A---AGVEEFISRYIQLHAPHVRAAIAGLS---CPVAALVVDFFCTPLLDVARELAVPAYVYFTSTAAMLALMLRLPALD 155 (480)
T ss_pred c---ccHHHHHHHHHHhhhHHHHHHHHhcC---CCceEEEECCcchhHHHHHHHhCCCEEEEECccHHHHHHHhhhhhhc
Confidence 1 23345555555566666777776652 3579999999999999999999999999999999988887776321
Q ss_pred -ccc--CCCCCCceeCCCCCCCCCCCCCCccccCCCCchHHHHHHHHHhhhccCCcEEEecchhhhhHHHHHHHHhc---
Q 012412 158 -SLE--LPLTGNEILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKT--- 231 (464)
Q Consensus 158 -~~~--~p~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~--- 231 (464)
..+ .+....+..+|++|.++..+++.+..... ......+. .......+++++++|||++||+...+.+...
T Consensus 156 ~~~~~~~~~~~~~~~iPGlp~l~~~dlp~~~~~~~--~~~~~~~~-~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~ 232 (480)
T PLN00164 156 EEVAVEFEEMEGAVDVPGLPPVPASSLPAPVMDKK--SPNYAWFV-YHGRRFMEAAGIIVNTAAELEPGVLAAIADGRCT 232 (480)
T ss_pred ccccCcccccCcceecCCCCCCChHHCCchhcCCC--cHHHHHHH-HHHHhhhhcCEEEEechHHhhHHHHHHHHhcccc
Confidence 111 11111234589998888888886553221 11223334 4445567788999999999999999888653
Q ss_pred -----CCeeeecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhC
Q 012412 232 -----WSLRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSS 306 (464)
Q Consensus 232 -----~~~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~ 306 (464)
++++.|||+.+... . +. ....++++.+||+.++.+++|||||||....+.+++.+++.+|+.+
T Consensus 233 ~~~~~~~v~~vGPl~~~~~---~-~~--------~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~q~~ela~gL~~s 300 (480)
T PLN00164 233 PGRPAPTVYPIGPVISLAF---T-PP--------AEQPPHECVRWLDAQPPASVVFLCFGSMGFFDAPQVREIAAGLERS 300 (480)
T ss_pred ccCCCCceEEeCCCccccc---c-CC--------CccchHHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHHHc
Confidence 36999999975311 0 00 0123567999999988889999999999888999999999999999
Q ss_pred CCeEEEEEcCcc------------cCcCChhhhhhccCCCcE-EEEeccChHHhhccccccceeccCChhHHHHHHHhCC
Q 012412 307 DQHFLWVVRESE------------QAKLPKKFSDETLTSHKS-LVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGV 373 (464)
Q Consensus 307 ~~~~i~~~~~~~------------~~~~~~~~~~~~~~~~nv-~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~Gv 373 (464)
+.+|+|++.... ...+|+++.++ ..++. .+.+|+||.+||+|+++++||||||+||++||+++||
T Consensus 301 ~~~flWv~~~~~~~~~~~~~~~~~~~~lp~~~~~~--~~~~g~~v~~w~PQ~~iL~h~~vg~fvtH~GwnS~~Eai~~GV 378 (480)
T PLN00164 301 GHRFLWVLRGPPAAGSRHPTDADLDELLPEGFLER--TKGRGLVWPTWAPQKEILAHAAVGGFVTHCGWNSVLESLWHGV 378 (480)
T ss_pred CCCEEEEEcCCcccccccccccchhhhCChHHHHH--hcCCCeEEeecCCHHHHhcCcccCeEEeecccchHHHHHHcCC
Confidence 999999997431 11266677666 34444 4459999999999999999999999999999999999
Q ss_pred cEeccCCccchhhHHHHHHhHhcceeecc-------CcCHHHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHHcCC
Q 012412 374 PMVAMPQWSDQSTNAKYILDVWKTGLKFP-------IVKRDAIADCISEILEGE--RGKELRRNAGKWRKLAKEAVAKGG 444 (464)
Q Consensus 374 P~v~~P~~~DQ~~na~rl~~~~G~g~~l~-------~~~~~~l~~~i~~ll~~~--~~~~~~~~a~~l~~~~~~~~~~gg 444 (464)
|||++|++.||+.||.++++.||+|+.+. ..+.++|.++|+++|.++ +|+.+|++|+++++.+++++++||
T Consensus 379 P~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~~~~~~~~~e~l~~av~~vm~~~~~~~~~~r~~a~~~~~~~~~a~~~gG 458 (480)
T PLN00164 379 PMAPWPLYAEQHLNAFELVADMGVAVAMKVDRKRDNFVEAAELERAVRSLMGGGEEEGRKAREKAAEMKAACRKAVEEGG 458 (480)
T ss_pred CEEeCCccccchhHHHHHHHHhCeEEEeccccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhcCCC
Confidence 99999999999999998865339999884 258999999999999774 378999999999999999999999
Q ss_pred CcHHHHHHHHHHHHhhc
Q 012412 445 SSDSNIDEFVASLACSK 461 (464)
Q Consensus 445 ~~~~~~~~~~~~l~~~~ 461 (464)
|+...+++|++++...+
T Consensus 459 SS~~~l~~~v~~~~~~~ 475 (480)
T PLN00164 459 SSYAALQRLAREIRHGA 475 (480)
T ss_pred cHHHHHHHHHHHHHhcc
Confidence 99999999999997653
|
|
| >PLN02670 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-59 Score=455.88 Aligned_cols=428 Identities=26% Similarity=0.439 Sum_probs=320.9
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccC--CCCCCceEEEcc----CCCCCCCCCCccCH
Q 012412 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRD--SSSSSIPLEAIS----DGYDEGGYAQAESI 85 (464)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~--~~~~~~~~~~i~----~~~~~~~~~~~~~~ 85 (464)
.+.||+++|++++||++|++.||+.|+.||+.|||++++.+...+... ....++++..+| ++++. +.+...+.
T Consensus 5 ~~~HVvl~P~paqGHi~P~l~LAk~La~~G~~vT~v~t~~n~~~~~~~~~~~~~~i~~~~lp~p~~dglp~-~~~~~~~~ 83 (472)
T PLN02670 5 EVLHVAMFPWLAMGHLIPFLRLSKLLAQKGHKISFISTPRNLHRLPKIPSQLSSSITLVSFPLPSVPGLPS-SAESSTDV 83 (472)
T ss_pred CCcEEEEeCChhhhHHHHHHHHHHHHHhCCCEEEEEeCCchHHhhhhccccCCCCeeEEECCCCccCCCCC-Cccccccc
Confidence 356999999999999999999999999999999999999876555421 112358899888 45554 32222222
Q ss_pred H----HHHHHHHHhCcHHHHHHHHHhcCCCCCccEEEeCCchhhHHHHHHHcCCccEEEecchHHHHHHHhhhh----cC
Q 012412 86 E----AYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVK----KG 157 (464)
Q Consensus 86 ~----~~~~~~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~----~~ 157 (464)
. .++......+...++++++++ +++|||+|.+..|+..+|+++|||++.|++++++.+.++.+.. ++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~l~~~-----~~~cvI~D~f~~wa~~vA~~~gIP~~~f~~~~a~~~~~~~~~~~~~~~~ 158 (472)
T PLN02670 84 PYTKQQLLKKAFDLLEPPLTTFLETS-----KPDWIIYDYASHWLPSIAAELGISKAFFSLFTAATLSFIGPPSSLMEGG 158 (472)
T ss_pred chhhHHHHHHHHHHhHHHHHHHHHhC-----CCcEEEECCcchhHHHHHHHcCCCEEEEehhhHHHHHHHhhhHhhhhcc
Confidence 1 233333334444455554442 4599999999999999999999999999999988887765431 11
Q ss_pred cccCCCCCCce-eCCCC-C---C--CCCCCCCCccccCCCCchHHHHHHHHHhhhccCCcEEEecchhhhhHHHHHHHHh
Q 012412 158 SLELPLTGNEI-LLPGM-P---P--LEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRK 230 (464)
Q Consensus 158 ~~~~p~~~~~~-~~p~~-p---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~ 230 (464)
..+ ..+... .+|+. | . +...+++.+.............+. +......+++++++|||.+||....+.+.+
T Consensus 159 ~~~--~~~~~~~~~p~~~P~~~~~~~~~~dlp~~~~~~~~~~~~~~~~~-~~~~~~~~~~gvlvNTf~eLE~~~l~~l~~ 235 (472)
T PLN02670 159 DLR--STAEDFTVVPPWVPFESNIVFRYHEVTKYVEKTEEDETGPSDSV-RFGFAIGGSDVVIIRSSPEFEPEWFDLLSD 235 (472)
T ss_pred cCC--CccccccCCCCcCCCCccccccHHHhhHHHhccCccchHHHHHH-HHHhhcccCCEEEEeCHHHHhHHHHHHHHH
Confidence 111 111111 13432 1 1 333455554432222222233344 444556778899999999999999999876
Q ss_pred c--CCeeeecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhCCC
Q 012412 231 T--WSLRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQ 308 (464)
Q Consensus 231 ~--~~~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~ 308 (464)
. .+++.|||+.+.... ..+ ... .. ....+++.+||+.++++++|||||||....+.+++.+++.+|+.+++
T Consensus 236 ~~~~~v~~VGPl~~~~~~--~~~-~~~--~~--~~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gl~~s~~ 308 (472)
T PLN02670 236 LYRKPIIPIGFLPPVIED--DEE-DDT--ID--VKGWVRIKEWLDKQRVNSVVYVALGTEASLRREEVTELALGLEKSET 308 (472)
T ss_pred hhCCCeEEEecCCccccc--ccc-ccc--cc--cchhHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHHCCC
Confidence 5 369999999763110 000 000 00 01125789999998788999999999999999999999999999999
Q ss_pred eEEEEEcCcc------cCcCChhhhhhccCCCcEEE-EeccChHHhhccccccceeccCChhHHHHHHHhCCcEeccCCc
Q 012412 309 HFLWVVRESE------QAKLPKKFSDETLTSHKSLV-VSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQW 381 (464)
Q Consensus 309 ~~i~~~~~~~------~~~~~~~~~~~~~~~~nv~~-~~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~ 381 (464)
+|+|++.... ...+|++|.++ ..++..+ .+|+||.++|+|+++++||||||+||++||+++|||||++|++
T Consensus 309 ~FlWv~r~~~~~~~~~~~~lp~~f~~~--~~~rG~vv~~W~PQ~~IL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~ 386 (472)
T PLN02670 309 PFFWVLRNEPGTTQNALEMLPDGFEER--VKGRGMIHVGWVPQVKILSHESVGGFLTHCGWNSVVEGLGFGRVLILFPVL 386 (472)
T ss_pred CEEEEEcCCcccccchhhcCChHHHHh--ccCCCeEEeCcCCHHHHhcCcccceeeecCCcchHHHHHHcCCCEEeCcch
Confidence 9999997521 12477888777 4555555 5999999999999999999999999999999999999999999
Q ss_pred cchhhHHHHHHhHhcceeecc--C----cCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHH
Q 012412 382 SDQSTNAKYILDVWKTGLKFP--I----VKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVA 455 (464)
Q Consensus 382 ~DQ~~na~rl~~~~G~g~~l~--~----~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~ 455 (464)
.||+.||+++++. |+|+.+. + ++.++|.++|+++|.+++|++||+||+++++.++++ +...++++++++
T Consensus 387 ~DQ~~Na~~v~~~-g~Gv~l~~~~~~~~~~~e~i~~av~~vm~~~~g~~~r~~a~~l~~~~~~~----~~~~~~~~~~~~ 461 (472)
T PLN02670 387 NEQGLNTRLLHGK-KLGLEVPRDERDGSFTSDSVAESVRLAMVDDAGEEIRDKAKEMRNLFGDM----DRNNRYVDELVH 461 (472)
T ss_pred hccHHHHHHHHHc-CeeEEeeccccCCcCcHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHhCc----chhHHHHHHHHH
Confidence 9999999999998 9999985 2 789999999999998877889999999999999964 788999999999
Q ss_pred HHHhhcC
Q 012412 456 SLACSKN 462 (464)
Q Consensus 456 ~l~~~~~ 462 (464)
+|...+.
T Consensus 462 ~l~~~~~ 468 (472)
T PLN02670 462 YLRENRS 468 (472)
T ss_pred HHHHhcc
Confidence 9988763
|
|
| >PLN02554 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-58 Score=460.88 Aligned_cols=425 Identities=25% Similarity=0.426 Sum_probs=325.8
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCC--CeEEEEeCccccccc-------ccCC--CCCCceEEEccCCCCCCCCCC
Q 012412 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKG--IKVTLVTTRFFYKSL-------HRDS--SSSSIPLEAISDGYDEGGYAQ 81 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rG--h~V~~~~~~~~~~~~-------~~~~--~~~~~~~~~i~~~~~~~~~~~ 81 (464)
++||+++|+++.||++|++.||+.|+.+| ..|||++++.+.... .... ...++++..+|++.+. ...
T Consensus 2 ~~hvvl~P~paqGHi~P~l~LAk~La~~G~~~~vT~v~t~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~-~~~- 79 (481)
T PLN02554 2 KIELVFIPSPGIGHLRPTVELAKLLVDSDDRLSITVIIIPSRSGDDASSSAYIASLSASSEDRLRYEVISAGDQP-TTE- 79 (481)
T ss_pred ceEEEEeCCcchhhHHHHHHHHHHHHhCCCCEEEEEEeCCCccchhhhhhhhhhhcccCCCCCeEEEEcCCCCCC-ccc-
Confidence 35999999999999999999999999998 889999998764421 1000 0235999999866542 111
Q ss_pred ccCHHHHHHHHHHhCcHHHHHHHHHhcC-CCCCccEEEeCCchhhHHHHHHHcCCccEEEecchHHHHHHHhhhhcCc--
Q 012412 82 AESIEAYLERFWQIGPQTLTELVEKMNG-SDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGS-- 158 (464)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~~~~l~~-~~~p~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~-- 158 (464)
...+..++..+.......++.++..... ..+|++|||+|.++.|+..+|+++|||++.|++++++.+.++.+.....
T Consensus 80 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~pv~cvV~D~f~~wa~dvA~~lgIP~~~F~t~sa~~~~~~~~~~~~~~~ 159 (481)
T PLN02554 80 DPTFQSYIDNQKPKVRDAVAKLVDDSSTPSSPRLAGFVVDMFCTSMIDVANEFGVPSYMFYTSNATFLGLQLHVQMLYDE 159 (481)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEECCcchhHHHHHHHhCCCEEEEeCCcHHHHHHHHhhhhhccc
Confidence 1122233333333333333333332221 2245689999999999999999999999999999999998887763211
Q ss_pred --cc---CCCCCCceeCCCCC-CCCCCCCCCccccCCCCchHHHHHHHHHhhhccCCcEEEecchhhhhHHHHHHHHh--
Q 012412 159 --LE---LPLTGNEILLPGMP-PLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRK-- 230 (464)
Q Consensus 159 --~~---~p~~~~~~~~p~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~-- 230 (464)
.+ .++...+..+|+++ +++..+++..... ..+...+. +......+++++++||+.+|+......+.+
T Consensus 160 ~~~~~~~~~~~~~~v~iPgl~~pl~~~dlp~~~~~----~~~~~~~~-~~~~~~~~~~gvlvNt~~eLe~~~~~~l~~~~ 234 (481)
T PLN02554 160 KKYDVSELEDSEVELDVPSLTRPYPVKCLPSVLLS----KEWLPLFL-AQARRFREMKGILVNTVAELEPQALKFFSGSS 234 (481)
T ss_pred cccCccccCCCCceeECCCCCCCCCHHHCCCcccC----HHHHHHHH-HHHHhcccCCEEEEechHHHhHHHHHHHHhcc
Confidence 11 11212345688884 6777777654421 12334444 555667789999999999999988888864
Q ss_pred --cCCeeeecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhCCC
Q 012412 231 --TWSLRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQ 308 (464)
Q Consensus 231 --~~~~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~ 308 (464)
.++++.|||+..... +.. +. ..+.++++.+|++.++++++|||||||+...+.+++++++.+|+.+++
T Consensus 235 ~~~~~v~~vGpl~~~~~-----~~~---~~--~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~la~~l~~~~~ 304 (481)
T PLN02554 235 GDLPPVYPVGPVLHLEN-----SGD---DS--KDEKQSEILRWLDEQPPKSVVFLCFGSMGGFSEEQAREIAIALERSGH 304 (481)
T ss_pred cCCCCEEEeCCCccccc-----ccc---cc--ccccchHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHHHHcCC
Confidence 246999999943211 000 00 012346899999998778899999999988899999999999999999
Q ss_pred eEEEEEcCcc--------------cCcCChhhhhhccCCCcEEEEeccChHHhhccccccceeccCChhHHHHHHHhCCc
Q 012412 309 HFLWVVRESE--------------QAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVP 374 (464)
Q Consensus 309 ~~i~~~~~~~--------------~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP 374 (464)
+|||++.+.. ...++++|.++ .++|+++++|+||.+||.|.++++||||||+||++||+++|||
T Consensus 305 ~flW~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~r--~~~~g~v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Ea~~~GVP 382 (481)
T PLN02554 305 RFLWSLRRASPNIMKEPPGEFTNLEEILPEGFLDR--TKDIGKVIGWAPQVAVLAKPAIGGFVTHCGWNSILESLWFGVP 382 (481)
T ss_pred CeEEEEcCCcccccccccccccchhhhCChHHHHH--hccCceEEeeCCHHHHhCCcccCcccccCccchHHHHHHcCCC
Confidence 9999996521 12357888777 7799999999999999999999999999999999999999999
Q ss_pred EeccCCccchhhHH-HHHHhHhcceeecc-------------CcCHHHHHHHHHHHhc-CCchHHHHHHHHHHHHHHHHH
Q 012412 375 MVAMPQWSDQSTNA-KYILDVWKTGLKFP-------------IVKRDAIADCISEILE-GERGKELRRNAGKWRKLAKEA 439 (464)
Q Consensus 375 ~v~~P~~~DQ~~na-~rl~~~~G~g~~l~-------------~~~~~~l~~~i~~ll~-~~~~~~~~~~a~~l~~~~~~~ 439 (464)
||++|++.||+.|| .+++++ |+|+.+. .++.++|.++|+++|. |+ +||+||+++++.++++
T Consensus 383 ~l~~P~~~DQ~~Na~~~v~~~-g~Gv~l~~~~~~~~~~~~~~~~~~e~l~~av~~vm~~~~---~~r~~a~~l~~~~~~a 458 (481)
T PLN02554 383 MAAWPLYAEQKFNAFEMVEEL-GLAVEIRKYWRGDLLAGEMETVTAEEIERGIRCLMEQDS---DVRKRVKEMSEKCHVA 458 (481)
T ss_pred EEecCccccchhhHHHHHHHh-CceEEeeccccccccccccCeEcHHHHHHHHHHHhcCCH---HHHHHHHHHHHHHHHH
Confidence 99999999999999 557788 9999873 4799999999999997 54 9999999999999999
Q ss_pred HHcCCCcHHHHHHHHHHHHhh
Q 012412 440 VAKGGSSDSNIDEFVASLACS 460 (464)
Q Consensus 440 ~~~gg~~~~~~~~~~~~l~~~ 460 (464)
+++||++...+++||++|..+
T Consensus 459 v~~gGss~~~l~~lv~~~~~~ 479 (481)
T PLN02554 459 LMDGGSSHTALKKFIQDVTKN 479 (481)
T ss_pred hcCCChHHHHHHHHHHHHHhh
Confidence 999999999999999999865
|
|
| >PLN03015 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-58 Score=449.15 Aligned_cols=421 Identities=26% Similarity=0.422 Sum_probs=324.7
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhC-CCeEEEEeCcccccccc-c--CC---CCCCceEEEccCCCCCCCC-CCccC
Q 012412 13 LAHCLVLTYPGQGHINPLLQFSRRLQHK-GIKVTLVTTRFFYKSLH-R--DS---SSSSIPLEAISDGYDEGGY-AQAES 84 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~r-Gh~V~~~~~~~~~~~~~-~--~~---~~~~~~~~~i~~~~~~~~~-~~~~~ 84 (464)
..||+++|++++||++|++.||+.|+.+ |..|||++++....... . .. ...++.+..+|....+ +. ....+
T Consensus 3 ~pHvvl~P~p~qGHi~P~l~LAk~La~~~g~~vT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~-~l~~~~~~ 81 (470)
T PLN03015 3 QPHALLVASPGLGHLIPILELGNRLSSVLNIHVTILAVTSGSSSPTETEAIHAAAARTTCQITEIPSVDVD-NLVEPDAT 81 (470)
T ss_pred CcEEEEECCcccccHHHHHHHHHHHHhCCCCeEEEEECCCchhhhccccccccccCCCceEEEECCCCccc-cCCCCCcc
Confidence 4599999999999999999999999977 99999998876543321 0 00 1125899999854332 22 11113
Q ss_pred HHHHHHHHHHhCcHHHHHHHHHhcCCCCCccEEEeCCchhhHHHHHHHcCCc-cEEEecchHHHHHHHhhhh--cCcccC
Q 012412 85 IEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLL-GAPFLTQSCAVDYIYYHVK--KGSLEL 161 (464)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~~~~~~~A~~~giP-~v~~~~~~~~~~~~~~~~~--~~~~~~ 161 (464)
....+..+.......++++++++. .|++|||+|.+..|+..+|+++||| .+.+.+++++....+.+.. .+....
T Consensus 82 ~~~~~~~~~~~~~~~~~~~l~~l~---~~~~ciV~D~f~~w~~~vA~~lgIP~~~~f~~~~a~~~~~~~~l~~~~~~~~~ 158 (470)
T PLN03015 82 IFTKMVVKMRAMKPAVRDAVKSMK---RKPTVMIVDFFGTALMSIADDVGVTAKYVYIPSHAWFLAVMVYLPVLDTVVEG 158 (470)
T ss_pred HHHHHHHHHHhchHHHHHHHHhcC---CCCeEEEEcCCcHHHHHHHHHcCCCEEEEEcCHHHHHHHHHHhhhhhhccccc
Confidence 333333344466677888887764 2459999999999999999999999 5777777776665555442 111111
Q ss_pred --CCCCCceeCCCCCCCCCCCCCCccccCCCCchHHHHHHHHHhhhccCCcEEEecchhhhhHHHHHHHHhc--------
Q 012412 162 --PLTGNEILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKT-------- 231 (464)
Q Consensus 162 --p~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~-------- 231 (464)
.+...++.+|++|.+...+++...... . ......+. +.+....+++++++|||++||+...+.+.+.
T Consensus 159 ~~~~~~~~~~vPg~p~l~~~dlp~~~~~~-~-~~~~~~~~-~~~~~~~~a~gvlvNTf~eLE~~~~~~l~~~~~~~~~~~ 235 (470)
T PLN03015 159 EYVDIKEPLKIPGCKPVGPKELMETMLDR-S-DQQYKECV-RSGLEVPMSDGVLVNTWEELQGNTLAALREDMELNRVMK 235 (470)
T ss_pred ccCCCCCeeeCCCCCCCChHHCCHhhcCC-C-cHHHHHHH-HHHHhcccCCEEEEechHHHhHHHHHHHHhhcccccccC
Confidence 011234668999988888888654321 1 12234444 5555678899999999999999999888653
Q ss_pred CCeeeecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhCCCeEE
Q 012412 232 WSLRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFL 311 (464)
Q Consensus 232 ~~~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i 311 (464)
++++.|||+.+.. . +...++++.+||+.++.+++|||||||....+.+++.+++.+|+.++++|+
T Consensus 236 ~~v~~VGPl~~~~-----~----------~~~~~~~~~~WLd~~~~~sVvyvsFGS~~~~~~~q~~ela~gl~~s~~~Fl 300 (470)
T PLN03015 236 VPVYPIGPIVRTN-----V----------HVEKRNSIFEWLDKQGERSVVYVCLGSGGTLTFEQTVELAWGLELSGQRFV 300 (470)
T ss_pred CceEEecCCCCCc-----c----------cccchHHHHHHHHhCCCCCEEEEECCcCCcCCHHHHHHHHHHHHhCCCcEE
Confidence 4699999997530 0 011235799999998889999999999999999999999999999999999
Q ss_pred EEEcCc-------------ccCcCChhhhhhccCCCcE-EEEeccChHHhhccccccceeccCChhHHHHHHHhCCcEec
Q 012412 312 WVVRES-------------EQAKLPKKFSDETLTSHKS-LVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVA 377 (464)
Q Consensus 312 ~~~~~~-------------~~~~~~~~~~~~~~~~~nv-~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~ 377 (464)
|++... ..+.+|++|.++ ..++. .+.+|+||.++|+|.++++||||||+||++||+++|||||+
T Consensus 301 Wv~r~~~~~~~~~~~~~~~~~~~lp~~f~er--~~~rGl~v~~W~PQ~~vL~h~~vg~fvtH~GwnS~~Eai~~GvP~v~ 378 (470)
T PLN03015 301 WVLRRPASYLGASSSDDDQVSASLPEGFLDR--TRGVGLVVTQWAPQVEILSHRSIGGFLSHCGWSSVLESLTKGVPIVA 378 (470)
T ss_pred EEEecCccccccccccccchhhcCChHHHHh--hccCceEEEecCCHHHHhccCccCeEEecCCchhHHHHHHcCCCEEe
Confidence 999631 112466777766 44555 45699999999999999999999999999999999999999
Q ss_pred cCCccchhhHHHHHHhHhcceeecc------CcCHHHHHHHHHHHhcC--CchHHHHHHHHHHHHHHHHHHHcCCCcHHH
Q 012412 378 MPQWSDQSTNAKYILDVWKTGLKFP------IVKRDAIADCISEILEG--ERGKELRRNAGKWRKLAKEAVAKGGSSDSN 449 (464)
Q Consensus 378 ~P~~~DQ~~na~rl~~~~G~g~~l~------~~~~~~l~~~i~~ll~~--~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~ 449 (464)
+|++.||+.||+++++.||+|+.+. ..+.+++.++|+++|.+ ++|+++|+||+++++.+++++++|||+.+.
T Consensus 379 ~P~~~DQ~~na~~~~~~~gvg~~~~~~~~~~~v~~e~i~~~v~~lm~~~~eeg~~~R~ra~~lk~~a~~Av~eGGSS~~n 458 (470)
T PLN03015 379 WPLYAEQWMNATLLTEEIGVAVRTSELPSEKVIGREEVASLVRKIVAEEDEEGQKIRAKAEEVRVSSERAWSHGGSSYNS 458 (470)
T ss_pred cccccchHHHHHHHHHHhCeeEEecccccCCccCHHHHHHHHHHHHccCcccHHHHHHHHHHHHHHHHHHhcCCCcHHHH
Confidence 9999999999999965559999983 58999999999999963 568899999999999999999999999999
Q ss_pred HHHHHHHH
Q 012412 450 IDEFVASL 457 (464)
Q Consensus 450 ~~~~~~~l 457 (464)
++++++++
T Consensus 459 l~~~~~~~ 466 (470)
T PLN03015 459 LFEWAKRC 466 (470)
T ss_pred HHHHHHhc
Confidence 99999886
|
|
| >PLN03004 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-58 Score=448.61 Aligned_cols=417 Identities=26% Similarity=0.412 Sum_probs=320.6
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCC--CeEEE--EeCcccccccc----cC-CCCCCceEEEccCCCCC-CCCCCc
Q 012412 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKG--IKVTL--VTTRFFYKSLH----RD-SSSSSIPLEAISDGYDE-GGYAQA 82 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rG--h~V~~--~~~~~~~~~~~----~~-~~~~~~~~~~i~~~~~~-~~~~~~ 82 (464)
.-||+++|++++||++|++.||+.|+.+| +.|++ ++++.+...+. .. ....++++..+|++.+. ......
T Consensus 3 ~~Hvvl~P~p~qGHi~P~l~LA~~La~~g~~~~vti~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~~~~~~~ 82 (451)
T PLN03004 3 EEAIVLYPAPPIGHLVSMVELGKTILSKNPSLSIHIILVPPPYQPESTATYISSVSSSFPSITFHHLPAVTPYSSSSTSR 82 (451)
T ss_pred CcEEEEeCCcccchHHHHHHHHHHHHhCCCceEEEEEEecCcchhhhhhhhhccccCCCCCeEEEEcCCCCCCCCccccc
Confidence 45999999999999999999999999998 44555 55544322111 10 11236999999876532 121222
Q ss_pred cCHHHHHHHHHHhCcHHHHHHHHHhcCCCCCccEEEeCCchhhHHHHHHHcCCccEEEecchHHHHHHHhhhhcCc--cc
Q 012412 83 ESIEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGS--LE 160 (464)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~--~~ 160 (464)
.+....+..+.......+.++++++... .|++|||+|.+..|+..+|+++|||++.|++++++.+.++.+..... .+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~pv~cII~D~~~~Wa~~vA~~lgIP~v~F~t~sA~~~~~~~~~~~~~~~~~ 161 (451)
T PLN03004 83 HHHESLLLEILCFSNPSVHRTLFSLSRN-FNVRAMIIDFFCTAVLDITADFTFPVYFFYTSGAACLAFSFYLPTIDETTP 161 (451)
T ss_pred cCHHHHHHHHHHhhhHHHHHHHHhcCCC-CCceEEEECCcchhHHHHHHHhCCCEEEEeCHhHHHHHHHHHHHhcccccc
Confidence 2333444444555666777777776332 46799999999999999999999999999999999988887753211 11
Q ss_pred CC--CCCCceeCCCCCCCCCCCCCCccccCCCCchHHHHHHHHHhhhccCCcEEEecchhhhhHHHHHHHHhc---CCee
Q 012412 161 LP--LTGNEILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKT---WSLR 235 (464)
Q Consensus 161 ~p--~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~---~~~~ 235 (464)
.+ .+..++.+|++|.++..+++.+.... .......+. +......+++.+++|||++||....+.+... .+++
T Consensus 162 ~~~~~~~~~v~iPg~p~l~~~dlp~~~~~~--~~~~~~~~~-~~~~~~~~~~~vl~NTf~eLE~~~l~~l~~~~~~~~v~ 238 (451)
T PLN03004 162 GKNLKDIPTVHIPGVPPMKGSDMPKAVLER--DDEVYDVFI-MFGKQLSKSSGIIINTFDALENRAIKAITEELCFRNIY 238 (451)
T ss_pred ccccccCCeecCCCCCCCChHHCchhhcCC--chHHHHHHH-HHHHhhcccCeeeeeeHHHhHHHHHHHHHhcCCCCCEE
Confidence 11 11234578999988888888765321 122334444 5555667788999999999999999988653 3699
Q ss_pred eecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEEc
Q 012412 236 TIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVR 315 (464)
Q Consensus 236 ~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~ 315 (464)
.|||+.+... .. . +. . ..+.++.+||+.++++++|||||||....+.+++++++.+|+.++++|+|++.
T Consensus 239 ~vGPl~~~~~----~~---~-~~-~--~~~~~c~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~~FlW~~r 307 (451)
T PLN03004 239 PIGPLIVNGR----IE---D-RN-D--NKAVSCLNWLDSQPEKSVVFLCFGSLGLFSKEQVIEIAVGLEKSGQRFLWVVR 307 (451)
T ss_pred EEeeeccCcc----cc---c-cc-c--chhhHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHHHCCCCEEEEEc
Confidence 9999975310 00 0 11 0 11356899999988889999999999989999999999999999999999998
Q ss_pred Ccc--------cC-cCChhhhhhccCCCcEEEEeccChHHhhccccccceeccCChhHHHHHHHhCCcEeccCCccchhh
Q 012412 316 ESE--------QA-KLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQST 386 (464)
Q Consensus 316 ~~~--------~~-~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~ 386 (464)
... .. .+|++|.++. ...|+.+.+|+||.+||+|+++++||||||+||++||+++|||||++|++.||+.
T Consensus 308 ~~~~~~~~~~~~~~~lp~gf~er~-~~~g~~v~~W~PQ~~iL~H~~v~~FvTH~G~nS~lEal~~GVP~v~~P~~~DQ~~ 386 (451)
T PLN03004 308 NPPELEKTELDLKSLLPEGFLSRT-EDKGMVVKSWAPQVPVLNHKAVGGFVTHCGWNSILEAVCAGVPMVAWPLYAEQRF 386 (451)
T ss_pred CCccccccccchhhhCChHHHHhc-cCCcEEEEeeCCHHHHhCCCccceEeccCcchHHHHHHHcCCCEEeccccccchh
Confidence 531 11 2777888773 2357888899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhHhcceeecc-----CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHcCCCcHH
Q 012412 387 NAKYILDVWKTGLKFP-----IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDS 448 (464)
Q Consensus 387 na~rl~~~~G~g~~l~-----~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~ 448 (464)
||+++++.||+|+.++ ..+.++|.++|+++|.|+ +||++++++++..+.++++|||+.+
T Consensus 387 na~~~~~~~g~g~~l~~~~~~~~~~e~l~~av~~vm~~~---~~r~~a~~~~~~a~~Av~~GGSS~~ 450 (451)
T PLN03004 387 NRVMIVDEIKIAISMNESETGFVSSTEVEKRVQEIIGEC---PVRERTMAMKNAAELALTETGSSHT 450 (451)
T ss_pred hHHHHHHHhCceEEecCCcCCccCHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 9999986449999996 369999999999999886 9999999999999999999999753
|
|
| >PLN02167 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-57 Score=449.00 Aligned_cols=430 Identities=27% Similarity=0.446 Sum_probs=322.7
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCC---eEEEEeCccccc-----ccccC-CCCCCceEEEccCCCCCCCCCC-
Q 012412 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKGI---KVTLVTTRFFYK-----SLHRD-SSSSSIPLEAISDGYDEGGYAQ- 81 (464)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh---~V~~~~~~~~~~-----~~~~~-~~~~~~~~~~i~~~~~~~~~~~- 81 (464)
+..||+++|++++||++|++.||+.|+.+|. .||++++..... .+... ....+++|..+|++......+.
T Consensus 2 ~~~hVv~~PfpaqGHi~P~l~LAk~La~~G~~~t~vt~~~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~p~~~~~~ 81 (475)
T PLN02167 2 KEAELIFVPFPSTGHILVTIEFAKRLINLDRRIHTITILYWSLPFAPQADAFLKSLIASEPRIRLVTLPEVQDPPPMELF 81 (475)
T ss_pred CccEEEEeCChhhhhHHHHHHHHHHHHhCCCCeEEEEEEECCCCcchhhhHHHhhcccCCCCeEEEECCCCCCCcccccc
Confidence 3469999999999999999999999999983 567777543221 11110 1123699999986542211110
Q ss_pred ccCHHHHHHHHHHhCcHHHHHHHHHhcC----CCC-CccEEEeCCchhhHHHHHHHcCCccEEEecchHHHHHHHhhhhc
Q 012412 82 AESIEAYLERFWQIGPQTLTELVEKMNG----SDS-PVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKK 156 (464)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~~~~l~~----~~~-p~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~ 156 (464)
.......+..+...+...+++.++++.. ... |++|||+|.+..|+..+|+++|||++.|++++++.+.++.+...
T Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~pv~cvV~D~f~~Wa~dVA~elgIP~v~F~t~~A~~~~~~~~~~~ 161 (475)
T PLN02167 82 VKASEAYILEFVKKMVPLVRDALSTLVSSRDESDSVRVAGLVLDFFCVPLIDVGNEFNLPSYIFLTCNAGFLGMMKYLPE 161 (475)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCeEEEEECCccHHHHHHHHHhCCCEEEEECccHHHHHHHHHHHH
Confidence 1112223333444455556666666532 112 56999999999999999999999999999999988887765531
Q ss_pred --Cccc--CCC--CCCceeCCCC-CCCCCCCCCCccccCCCCchHHHHHHHHHhhhccCCcEEEecchhhhhHHHHHHHH
Q 012412 157 --GSLE--LPL--TGNEILLPGM-PPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLR 229 (464)
Q Consensus 157 --~~~~--~p~--~~~~~~~p~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~ 229 (464)
...+ .+. ...++.+||+ +.++..+++....... ....+. +.+....+++.+++|||++||+...+.+.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~iPgl~~~l~~~dlp~~~~~~~----~~~~~~-~~~~~~~~a~~vlvNTf~eLE~~~~~~l~ 236 (475)
T PLN02167 162 RHRKTASEFDLSSGEEELPIPGFVNSVPTKVLPPGLFMKE----SYEAWV-EIAERFPEAKGILVNSFTELEPNAFDYFS 236 (475)
T ss_pred hccccccccccCCCCCeeECCCCCCCCChhhCchhhhCcc----hHHHHH-HHHHhhcccCEeeeccHHHHHHHHHHHHH
Confidence 1111 111 1234568898 4567667665432211 123344 55556677889999999999999998885
Q ss_pred hc----CCeeeecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhh
Q 012412 230 KT----WSLRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKS 305 (464)
Q Consensus 230 ~~----~~~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~ 305 (464)
.. ++++.|||+.+... . . . ...+..+..++.+||+.++.+++|||||||+...+.+++.+++.+|+.
T Consensus 237 ~~~~~~p~v~~vGpl~~~~~---~-~---~--~~~~~~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~ela~~l~~ 307 (475)
T PLN02167 237 RLPENYPPVYPVGPILSLKD---R-T---S--PNLDSSDRDRIMRWLDDQPESSVVFLCFGSLGSLPAPQIKEIAQALEL 307 (475)
T ss_pred hhcccCCeeEEecccccccc---c-c---C--CCCCcchhHHHHHHHhcCCCCceEEEeecccccCCHHHHHHHHHHHHh
Confidence 53 46999999976411 0 0 0 001111246799999998888999999999988899999999999999
Q ss_pred CCCeEEEEEcCcc------cCcCChhhhhhccCCCcEEEEeccChHHhhccccccceeccCChhHHHHHHHhCCcEeccC
Q 012412 306 SDQHFLWVVRESE------QAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMP 379 (464)
Q Consensus 306 ~~~~~i~~~~~~~------~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P 379 (464)
++++|||+++... ...+|++|.++ ..+++++++|+||.++|+|+++++||||||+||++||+++|||||++|
T Consensus 308 ~~~~flw~~~~~~~~~~~~~~~lp~~~~er--~~~rg~v~~w~PQ~~iL~h~~vg~fvtH~G~nS~~Eal~~GvP~l~~P 385 (475)
T PLN02167 308 VGCRFLWSIRTNPAEYASPYEPLPEGFMDR--VMGRGLVCGWAPQVEILAHKAIGGFVSHCGWNSVLESLWFGVPIATWP 385 (475)
T ss_pred CCCcEEEEEecCcccccchhhhCChHHHHH--hccCeeeeccCCHHHHhcCcccCeEEeeCCcccHHHHHHcCCCEEecc
Confidence 9999999997531 12477888777 667888999999999999999999999999999999999999999999
Q ss_pred CccchhhHHHH-HHhHhcceeecc---------CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHcCCCcHHH
Q 012412 380 QWSDQSTNAKY-ILDVWKTGLKFP---------IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSN 449 (464)
Q Consensus 380 ~~~DQ~~na~r-l~~~~G~g~~l~---------~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~ 449 (464)
++.||+.||++ +++. |+|+.+. .++.++|.++|+++|.++ ++||++|+++++.+++++.+|||+...
T Consensus 386 ~~~DQ~~na~~~~~~~-g~g~~~~~~~~~~~~~~~~~~~l~~av~~~m~~~--~~~r~~a~~~~~~~~~av~~gGsS~~~ 462 (475)
T PLN02167 386 MYAEQQLNAFTMVKEL-GLAVELRLDYVSAYGEIVKADEIAGAVRSLMDGE--DVPRKKVKEIAEAARKAVMDGGSSFVA 462 (475)
T ss_pred ccccchhhHHHHHHHh-CeeEEeecccccccCCcccHHHHHHHHHHHhcCC--HHHHHHHHHHHHHHHHHHhCCCcHHHH
Confidence 99999999986 5677 9999874 268999999999999764 489999999999999999999999999
Q ss_pred HHHHHHHHHhh
Q 012412 450 IDEFVASLACS 460 (464)
Q Consensus 450 ~~~~~~~l~~~ 460 (464)
+++||++|...
T Consensus 463 l~~~v~~i~~~ 473 (475)
T PLN02167 463 VKRFIDDLLGD 473 (475)
T ss_pred HHHHHHHHHhc
Confidence 99999999764
|
|
| >PLN02764 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-57 Score=438.90 Aligned_cols=414 Identities=25% Similarity=0.422 Sum_probs=313.0
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCC-CC--CCceEEEcc--CCCCCCCCCCccC---
Q 012412 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDS-SS--SSIPLEAIS--DGYDEGGYAQAES--- 84 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~-~~--~~~~~~~i~--~~~~~~~~~~~~~--- 84 (464)
++||+++|++++||++|++.||+.|+.+|+.|||++++.+...+.... .. ..+.+.++| ++++. +.+...+
T Consensus 5 ~~Hvvl~P~paqGHi~P~l~LAk~La~~g~~vT~~tt~~~~~~~~~~~~~~~~~~v~~~~~p~~~glp~-g~e~~~~~~~ 83 (453)
T PLN02764 5 KFHVLMYPWFATGHMTPFLFLANKLAEKGHTVTFLLPKKALKQLEHLNLFPHNIVFRSVTVPHVDGLPV-GTETVSEIPV 83 (453)
T ss_pred CcEEEEECCcccccHHHHHHHHHHHHhCCCEEEEEeCcchhhhhcccccCCCCceEEEEECCCcCCCCC-cccccccCCh
Confidence 579999999999999999999999999999999999998766554211 11 126777777 55554 3222111
Q ss_pred -HHHHHHHHHHhCcHHHHHHHHHhcCCCCCccEEEeCCchhhHHHHHHHcCCccEEEecchHHHHHHHhhhhcCcccCCC
Q 012412 85 -IEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPL 163 (464)
Q Consensus 85 -~~~~~~~~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p~ 163 (464)
....+..........+.++++.+ + +||||+| +..|+..+|+++|||++.|++++++.+.++.. ..+..
T Consensus 84 ~~~~~~~~a~~~~~~~~~~~l~~~----~-~~~iV~D-~~~w~~~vA~~~gIP~~~f~~~~a~~~~~~~~-~~~~~---- 152 (453)
T PLN02764 84 TSADLLMSAMDLTRDQVEVVVRAV----E-PDLIFFD-FAHWIPEVARDFGLKTVKYVVVSASTIASMLV-PGGEL---- 152 (453)
T ss_pred hHHHHHHHHHHHhHHHHHHHHHhC----C-CCEEEEC-CchhHHHHHHHhCCCEEEEEcHHHHHHHHHhc-ccccC----
Confidence 11222222223344455555442 3 4999999 48899999999999999999999888777653 11111
Q ss_pred CCCceeCCCCCC----CCCCCCCCccc--cCCCCchHHHHHHHHHhhhccCCcEEEecchhhhhHHHHHHHHhc--CCee
Q 012412 164 TGNEILLPGMPP----LEPQDMPSFIH--DLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKT--WSLR 235 (464)
Q Consensus 164 ~~~~~~~p~~p~----~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~--~~~~ 235 (464)
..+.|++|. ++..+++.+.. ...........+. +......+++.+++|||.+||+...+.+.+. .++|
T Consensus 153 ---~~~~pglp~~~v~l~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~vlvNTf~eLE~~~~~~~~~~~~~~v~ 228 (453)
T PLN02764 153 ---GVPPPGYPSSKVLLRKQDAYTMKNLEPTNTIDVGPNLLE-RVTTSLMNSDVIAIRTAREIEGNFCDYIEKHCRKKVL 228 (453)
T ss_pred ---CCCCCCCCCCcccCcHhhCcchhhcCCCccchhHHHHHH-HHHHhhccCCEEEEeccHHhhHHHHHHHHhhcCCcEE
Confidence 122477763 44445544321 1011111222222 4435567788999999999999999988664 3699
Q ss_pred eecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEEc
Q 012412 236 TIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVR 315 (464)
Q Consensus 236 ~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~ 315 (464)
.|||+.+.. . .. ...++++.+|||.++++++|||||||....+.+++.+++.+|+..+.+|+|++.
T Consensus 229 ~VGPL~~~~-------~-~~------~~~~~~cl~WLD~q~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~pflwv~r 294 (453)
T PLN02764 229 LTGPVFPEP-------D-KT------RELEERWVKWLSGYEPDSVVFCALGSQVILEKDQFQELCLGMELTGSPFLVAVK 294 (453)
T ss_pred EeccCccCc-------c-cc------ccchhHHHHHHhCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCeEEEEe
Confidence 999997641 0 00 012467999999999999999999999989999999999999999999999997
Q ss_pred Cc-----ccCcCChhhhhhccCCCcE-EEEeccChHHhhccccccceeccCChhHHHHHHHhCCcEeccCCccchhhHHH
Q 012412 316 ES-----EQAKLPKKFSDETLTSHKS-LVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAK 389 (464)
Q Consensus 316 ~~-----~~~~~~~~~~~~~~~~~nv-~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~ 389 (464)
.. ....+|++|.++ ..++. .+.+|+||.+||+|.++++||||||+||++||+++|||||++|++.||+.||+
T Consensus 295 ~~~~~~~~~~~lp~~f~~r--~~grG~v~~~W~PQ~~vL~h~~v~~FvtH~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~ 372 (453)
T PLN02764 295 PPRGSSTIQEALPEGFEER--VKGRGVVWGGWVQQPLILSHPSVGCFVSHCGFGSMWESLLSDCQIVLVPQLGDQVLNTR 372 (453)
T ss_pred CCCCCcchhhhCCcchHhh--hccCCcEEeCCCCHHHHhcCcccCeEEecCCchHHHHHHHcCCCEEeCCcccchHHHHH
Confidence 42 123588888887 44555 44599999999999999999999999999999999999999999999999999
Q ss_pred HHHhHhcceeecc-----CcCHHHHHHHHHHHhcC--CchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHhhcC
Q 012412 390 YILDVWKTGLKFP-----IVKRDAIADCISEILEG--ERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLACSKN 462 (464)
Q Consensus 390 rl~~~~G~g~~l~-----~~~~~~l~~~i~~ll~~--~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l~~~~~ 462 (464)
++++.||+|+.+. .++.++|.++++++|.+ +.|+++|++++++++.++ +||++...+++||+++....+
T Consensus 373 ~l~~~~g~gv~~~~~~~~~~~~e~i~~av~~vm~~~~~~g~~~r~~a~~~~~~~~----~~GSS~~~l~~lv~~~~~~~~ 448 (453)
T PLN02764 373 LLSDELKVSVEVAREETGWFSKESLRDAINSVMKRDSEIGNLVKKNHTKWRETLA----SPGLLTGYVDNFIESLQDLVS 448 (453)
T ss_pred HHHHHhceEEEeccccCCccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHH----hcCCHHHHHHHHHHHHHHhcc
Confidence 9975339999874 37999999999999987 447789999999999997 489999999999999987644
|
|
| >PLN02208 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-57 Score=441.24 Aligned_cols=413 Identities=22% Similarity=0.383 Sum_probs=306.7
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCC-CCCceEEEc--c--CCCCCCCCCCccCHHH
Q 012412 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSS-SSSIPLEAI--S--DGYDEGGYAQAESIEA 87 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~-~~~~~~~~i--~--~~~~~~~~~~~~~~~~ 87 (464)
++||+++|+++.||++|++.||+.|+.+||+|||++++.+...+..... ..++.+..+ + ++++. +.+....+..
T Consensus 4 ~~hvv~~P~paqGHi~P~l~LAk~La~~G~~VT~vtt~~~~~~i~~~~a~~~~i~~~~l~~p~~dgLp~-g~~~~~~l~~ 82 (442)
T PLN02208 4 KFHAFMFPWFAFGHMIPFLHLANKLAEKGHRVTFLLPKKAQKQLEHHNLFPDSIVFHPLTIPPVNGLPA-GAETTSDIPI 82 (442)
T ss_pred CCEEEEecCccccHHHHHHHHHHHHHhCCCEEEEEeccchhhhhhcccCCCCceEEEEeCCCCccCCCC-CcccccchhH
Confidence 4699999999999999999999999999999999999887766653211 124556554 3 34544 3332223332
Q ss_pred HHHHHHHhCcHHHHHHHHHhcCCCCCccEEEeCCchhhHHHHHHHcCCccEEEecchHHHHHHHhhhhcCcccCCCCCCc
Q 012412 88 YLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNE 167 (464)
Q Consensus 88 ~~~~~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 167 (464)
.+..+.......+.+.++++.++. ++||||+| ++.|+..+|+++|||++.|++++++... +.+...... .
T Consensus 83 ~l~~~~~~~~~~~~~~l~~~L~~~-~~~cVV~D-~~~wa~~vA~e~giP~~~f~~~~a~~~~-~~~~~~~~~-------~ 152 (442)
T PLN02208 83 SMDNLLSEALDLTRDQVEAAVRAL-RPDLIFFD-FAQWIPEMAKEHMIKSVSYIIVSATTIA-HTHVPGGKL-------G 152 (442)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEC-CcHhHHHHHHHhCCCEEEEEhhhHHHHH-HHccCcccc-------C
Confidence 233332222223334444443332 45999999 6789999999999999999999987653 333221111 1
Q ss_pred eeCCCCCC----CCCCCCCCccccCCCCchHHHHHHHHHhhhccCCcEEEecchhhhhHHHHHHHHhc--CCeeeecccC
Q 012412 168 ILLPGMPP----LEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKT--WSLRTIGPTI 241 (464)
Q Consensus 168 ~~~p~~p~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~--~~~~~vgp~~ 241 (464)
..+|++|. ++..+++.+. ........+.........+++.+++|||.+||+...+.+... ++++.|||+.
T Consensus 153 ~~~pglp~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~vl~Ntf~eLE~~~~~~~~~~~~~~v~~vGpl~ 228 (442)
T PLN02208 153 VPPPGYPSSKVLFRENDAHALA----TLSIFYKRLYHQITTGLKSCDVIALRTCKEIEGKFCDYISRQYHKKVLLTGPMF 228 (442)
T ss_pred CCCCCCCCcccccCHHHcCccc----ccchHHHHHHHHHHhhhccCCEEEEECHHHHHHHHHHHHHhhcCCCEEEEeecc
Confidence 22577764 2344444321 111223333312224556789999999999999999888664 3699999997
Q ss_pred CCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEEcCc----
Q 012412 242 PSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRES---- 317 (464)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~---- 317 (464)
+.. .. ..++++++.+||+.++++++|||||||....+.+.+.+++.+++..+.+++|++...
T Consensus 229 ~~~-------~~-------~~~~~~~~~~wLd~~~~~sVvyvSfGS~~~l~~~q~~e~~~~l~~s~~pf~wv~r~~~~~~ 294 (442)
T PLN02208 229 PEP-------DT-------SKPLEEQWSHFLSGFPPKSVVFCSLGSQIILEKDQFQELCLGMELTGLPFLIAVKPPRGSS 294 (442)
T ss_pred cCc-------CC-------CCCCHHHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEEeCCCccc
Confidence 641 00 012357899999998888999999999998899999999998877788888887642
Q ss_pred -ccCcCChhhhhhccCCCcEEEEeccChHHhhccccccceeccCChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhc
Q 012412 318 -EQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWK 396 (464)
Q Consensus 318 -~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G 396 (464)
....+|++|.++. ...|+.+.+|+||.++|+|+++++||||||+||++||+++|||||++|++.||+.||+++++.||
T Consensus 295 ~~~~~lp~~f~~r~-~~~g~~v~~W~PQ~~iL~H~~v~~FvtHcG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g 373 (442)
T PLN02208 295 TVQEGLPEGFEERV-KGRGVVWGGWVQQPLILDHPSIGCFVNHCGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFE 373 (442)
T ss_pred chhhhCCHHHHHHH-hcCCcEeeccCCHHHHhcCCccCeEEccCCchHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhc
Confidence 1135778887774 24577777999999999999999999999999999999999999999999999999999877339
Q ss_pred ceeecc--C---cCHHHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHh
Q 012412 397 TGLKFP--I---VKRDAIADCISEILEGE--RGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLAC 459 (464)
Q Consensus 397 ~g~~l~--~---~~~~~l~~~i~~ll~~~--~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l~~ 459 (464)
+|+.+. + ++.++|.++|++++.++ .|+++|++++++++.+. ++|++..++++||+++++
T Consensus 374 ~gv~~~~~~~~~~~~~~l~~ai~~~m~~~~e~g~~~r~~~~~~~~~~~----~~gsS~~~l~~~v~~l~~ 439 (442)
T PLN02208 374 VSVEVSREKTGWFSKESLSNAIKSVMDKDSDLGKLVRSNHTKLKEILV----SPGLLTGYVDKFVEELQE 439 (442)
T ss_pred eeEEeccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHh----cCCcHHHHHHHHHHHHHH
Confidence 999996 3 89999999999999774 37889999999999985 478999999999999865
|
|
| >PLN00414 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-56 Score=436.49 Aligned_cols=413 Identities=23% Similarity=0.395 Sum_probs=306.1
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCC-CCCCceEEEcc----CCCCCCCCCCccCHHH
Q 012412 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDS-SSSSIPLEAIS----DGYDEGGYAQAESIEA 87 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~-~~~~~~~~~i~----~~~~~~~~~~~~~~~~ 87 (464)
+.||+++|+++.||++|++.||+.|+.+|++|||++++.+...+.... ...++.|..++ +++++ +.+...+...
T Consensus 4 ~~HVvlvPfpaqGHi~PmL~LAk~Las~G~~VT~vtt~~~~~~i~~~~~~~~~i~~~~i~lP~~dGLP~-g~e~~~~l~~ 82 (446)
T PLN00414 4 KFHAFMYPWFGFGHMIPYLHLANKLAEKGHRVTFFLPKKAHKQLQPLNLFPDSIVFEPLTLPPVDGLPF-GAETASDLPN 82 (446)
T ss_pred CCEEEEecCcccchHHHHHHHHHHHHhCCCEEEEEeCCchhhhhcccccCCCceEEEEecCCCcCCCCC-cccccccchh
Confidence 569999999999999999999999999999999999998766554221 12247775553 45554 3222222211
Q ss_pred HHHHHHHhCcHHHHHHHHHhcCCCCCccEEEeCCchhhHHHHHHHcCCccEEEecchHHHHHHHhhhhcCcccCCCCCCc
Q 012412 88 YLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNE 167 (464)
Q Consensus 88 ~~~~~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 167 (464)
............+...++++.+... +||||+|. +.|+..+|+++|||++.|++++++...++.+.... . .
T Consensus 83 ~~~~~~~~a~~~l~~~l~~~L~~~~-p~cVV~D~-~~wa~~vA~~lgIP~~~F~~~~a~~~~~~~~~~~~-~-------~ 152 (446)
T PLN00414 83 STKKPIFDAMDLLRDQIEAKVRALK-PDLIFFDF-VHWVPEMAKEFGIKSVNYQIISAACVAMVLAPRAE-L-------G 152 (446)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhcCC-CeEEEECC-chhHHHHHHHhCCCEEEEecHHHHHHHHHhCcHhh-c-------C
Confidence 1121222222234444444433334 49999994 88999999999999999999999888776653211 0 0
Q ss_pred eeCCCCCC----CCCCCC--CCccccCCCCchHHHHHHHHHhhhccCCcEEEecchhhhhHHHHHHHHhc--CCeeeecc
Q 012412 168 ILLPGMPP----LEPQDM--PSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKT--WSLRTIGP 239 (464)
Q Consensus 168 ~~~p~~p~----~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~--~~~~~vgp 239 (464)
.+.|++|. +...+. +.+.. . ....+. +......+++.+++|||.+||+...+.+... .+++.|||
T Consensus 153 ~~~pg~p~~~~~~~~~~~~~~~~~~---~---~~~~~~-~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~v~~VGP 225 (446)
T PLN00414 153 FPPPDYPLSKVALRGHDANVCSLFA---N---SHELFG-LITKGLKNCDVVSIRTCVELEGNLCDFIERQCQRKVLLTGP 225 (446)
T ss_pred CCCCCCCCCcCcCchhhcccchhhc---c---cHHHHH-HHHHhhccCCEEEEechHHHHHHHHHHHHHhcCCCeEEEcc
Confidence 12455543 111111 11111 0 113333 4445567788999999999999999988764 26999999
Q ss_pred cCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEEcCc--
Q 012412 240 TIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRES-- 317 (464)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~-- 317 (464)
+.+... . ..+ .....++.+|||.++++++|||||||....+.+++.+++.+|+..+.+|+|++...
T Consensus 226 l~~~~~-------~-~~~----~~~~~~~~~WLD~q~~~sVvyvsfGS~~~~~~~q~~e~a~gL~~s~~~Flwvvr~~~~ 293 (446)
T PLN00414 226 MLPEPQ-------N-KSG----KPLEDRWNHWLNGFEPGSVVFCAFGTQFFFEKDQFQEFCLGMELTGLPFLIAVMPPKG 293 (446)
T ss_pred cCCCcc-------c-ccC----cccHHHHHHHHhcCCCCceEEEeecccccCCHHHHHHHHHHHHHcCCCeEEEEecCCC
Confidence 976410 0 000 11235688999999999999999999999999999999999999999999999642
Q ss_pred ---ccCcCChhhhhhccCCCcEEEE-eccChHHhhccccccceeccCChhHHHHHHHhCCcEeccCCccchhhHHHHHHh
Q 012412 318 ---EQAKLPKKFSDETLTSHKSLVV-SWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILD 393 (464)
Q Consensus 318 ---~~~~~~~~~~~~~~~~~nv~~~-~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~ 393 (464)
....+|++|.++ ..++..++ +|+||.+||+|+++++||||||+||++||+++|||||++|++.||+.||+++++
T Consensus 294 ~~~~~~~lp~~f~~r--~~~~g~vv~~w~PQ~~vL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~ 371 (446)
T PLN00414 294 SSTVQEALPEGFEER--VKGRGIVWEGWVEQPLILSHPSVGCFVNHCGFGSMWESLVSDCQIVFIPQLADQVLITRLLTE 371 (446)
T ss_pred cccchhhCChhHHHH--hcCCCeEEeccCCHHHHhcCCccceEEecCchhHHHHHHHcCCCEEecCcccchHHHHHHHHH
Confidence 123688899888 56666665 899999999999999999999999999999999999999999999999999964
Q ss_pred Hhcceeecc-----CcCHHHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHhhc
Q 012412 394 VWKTGLKFP-----IVKRDAIADCISEILEGE--RGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLACSK 461 (464)
Q Consensus 394 ~~G~g~~l~-----~~~~~~l~~~i~~ll~~~--~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l~~~~ 461 (464)
.||+|+.+. .++.++|+++++++|.++ .|+++|++++++++.+.+ .||++ ..+++||+++..-+
T Consensus 372 ~~g~g~~~~~~~~~~~~~~~i~~~v~~~m~~~~e~g~~~r~~a~~~~~~~~~---~gg~s-s~l~~~v~~~~~~~ 442 (446)
T PLN00414 372 ELEVSVKVQREDSGWFSKESLRDTVKSVMDKDSEIGNLVKRNHKKLKETLVS---PGLLS-GYADKFVEALENEV 442 (446)
T ss_pred HhCeEEEeccccCCccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHc---CCCcH-HHHHHHHHHHHHhc
Confidence 339999995 289999999999999764 367899999999999753 46634 44899999986554
|
|
| >PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-46 Score=374.98 Aligned_cols=402 Identities=17% Similarity=0.210 Sum_probs=274.9
Q ss_pred CCcEEEE-EcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEccCCCCCC--CCCCc------
Q 012412 12 KLAHCLV-LTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEG--GYAQA------ 82 (464)
Q Consensus 12 ~~~~il~-~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~------ 82 (464)
...|||+ +|.++.+|+.-+.+++++|++|||+||++++.... .... ....+++.+.++...... .....
T Consensus 19 ~~~kIl~~~P~~~~SH~~~~~~l~~~La~rGH~VTvi~p~~~~-~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 96 (507)
T PHA03392 19 RAARILAVFPTPAYSHHSVFKVYVEALAERGHNVTVIKPTLRV-YYAS-HLCGNITEIDASLSVEYFKKLVKSSAVFRKR 96 (507)
T ss_pred CcccEEEEcCCCCCcHHHHHHHHHHHHHHcCCeEEEEeccccc-cccc-CCCCCEEEEEcCCChHHHHHHHhhhhHHHhh
Confidence 4568985 48889999999999999999999999999875321 1110 013456655554111000 00000
Q ss_pred c---CHHHH----HHHHHHhCcHHHH--HHHHHhcCCCCCccEEEeCCchhhHHHHHHHc-CCccEEEecchHHHHHHHh
Q 012412 83 E---SIEAY----LERFWQIGPQTLT--ELVEKMNGSDSPVDCIVYDSILLWALDVAKKF-GLLGAPFLTQSCAVDYIYY 152 (464)
Q Consensus 83 ~---~~~~~----~~~~~~~~~~~l~--~~~~~l~~~~~p~DlVI~D~~~~~~~~~A~~~-giP~v~~~~~~~~~~~~~~ 152 (464)
. +.... ...+...+...+. ++.+.+.....+||+||+|.+..|+..+|+.+ ++|.|.+++...... ..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~kFDlvi~e~~~~c~~~la~~~~~~p~i~~ss~~~~~~--~~ 174 (507)
T PHA03392 97 GVVADSSTVTADNYMGLVRMISDQFDLPNVKNLIANKNNKFDLLVTEAFLDYPLVFSHLFGDAPVIQISSGYGLAE--NF 174 (507)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHCCHHHHHHHhcCCCceeEEEecccchhHHHHHHHhCCCCEEEEcCCCCchh--HH
Confidence 0 00001 1111111221111 12233331225689999999999999999999 999888777542211 11
Q ss_pred hhhcCcccCCCCCCceeCCCCCCCCCCCCCCccccCCCCch------HH-------HHHHHHHhhh--------ccCCcE
Q 012412 153 HVKKGSLELPLTGNEILLPGMPPLEPQDMPSFIHDLGSYPA------VS-------YMMMKFQFEN--------IDKADW 211 (464)
Q Consensus 153 ~~~~~~~~~p~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~------~~-------~~~~~~~~~~--------~~~~~~ 211 (464)
... +..| ..++++|.+ .....+.+.++.|..+.-. .. ..+.++.+.. ..+.+.
T Consensus 175 ~~~-gg~p----~~~syvP~~-~~~~~~~Msf~~R~~N~~~~~~~~~~~~~~~~~~~~l~~~~f~~~~~~~~~l~~~~~l 248 (507)
T PHA03392 175 ETM-GAVS----RHPVYYPNL-WRSKFGNLNVWETINEIYTELRLYNEFSLLADEQNKLLKQQFGPDTPTIRELRNRVQL 248 (507)
T ss_pred Hhh-ccCC----CCCeeeCCc-ccCCCCCCCHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHcCCCCCCHHHHHhCCcE
Confidence 111 1111 224567766 3344567777766555211 00 0011122211 234568
Q ss_pred EEecchhhhhHHHHHHHHhcC-CeeeecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEEeccccc
Q 012412 212 VLCNTFYELEEEVVEWLRKTW-SLRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVE 290 (464)
Q Consensus 212 ~l~~s~~~l~~~~~~~~~~~~-~~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~ 290 (464)
+++|+.+.+++ +++.+ ++.+|||+..+.. . .++.++++.+|++.. ++++|||||||...
T Consensus 249 ~lvns~~~~d~-----~rp~~p~v~~vGgi~~~~~------~--------~~~l~~~l~~fl~~~-~~g~V~vS~GS~~~ 308 (507)
T PHA03392 249 LFVNVHPVFDN-----NRPVPPSVQYLGGLHLHKK------P--------PQPLDDYLEEFLNNS-TNGVVYVSFGSSID 308 (507)
T ss_pred EEEecCccccC-----CCCCCCCeeeecccccCCC------C--------CCCCCHHHHHHHhcC-CCcEEEEECCCCCc
Confidence 99999998886 23333 4999999865410 0 124568999999975 45799999999863
Q ss_pred ---CCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChHHhhccccccceeccCChhHHHH
Q 012412 291 ---LKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTME 367 (464)
Q Consensus 291 ---~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~e 367 (464)
.+.+.++.+++++++++.+|||++++.. .+.+ .|+|+++.+|+||.+||+|+.+++||||||.||++|
T Consensus 309 ~~~~~~~~~~~~l~a~~~l~~~viw~~~~~~---~~~~------~p~Nv~i~~w~Pq~~lL~hp~v~~fItHGG~~s~~E 379 (507)
T PHA03392 309 TNDMDNEFLQMLLRTFKKLPYNVLWKYDGEV---EAIN------LPANVLTQKWFPQRAVLKHKNVKAFVTQGGVQSTDE 379 (507)
T ss_pred CCCCCHHHHHHHHHHHHhCCCeEEEEECCCc---Cccc------CCCceEEecCCCHHHHhcCCCCCEEEecCCcccHHH
Confidence 5789999999999999999999997532 1111 789999999999999998877777999999999999
Q ss_pred HHHhCCcEeccCCccchhhHHHHHHhHhcceeecc--CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHcCCC
Q 012412 368 ALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP--IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGS 445 (464)
Q Consensus 368 al~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~--~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~gg~ 445 (464)
|+++|||+|++|++.||+.||+|++++ |+|+.++ +++.++|.++|+++|+|+ +||+||+++++.++++ .-+
T Consensus 380 al~~GvP~v~iP~~~DQ~~Na~rv~~~-G~G~~l~~~~~t~~~l~~ai~~vl~~~---~y~~~a~~ls~~~~~~---p~~ 452 (507)
T PHA03392 380 AIDALVPMVGLPMMGDQFYNTNKYVEL-GIGRALDTVTVSAAQLVLAIVDVIENP---KYRKNLKELRHLIRHQ---PMT 452 (507)
T ss_pred HHHcCCCEEECCCCccHHHHHHHHHHc-CcEEEeccCCcCHHHHHHHHHHHhCCH---HHHHHHHHHHHHHHhC---CCC
Confidence 999999999999999999999999999 9999998 899999999999999997 9999999999999974 334
Q ss_pred cHHHHHHHHHHHHh
Q 012412 446 SDSNIDEFVASLAC 459 (464)
Q Consensus 446 ~~~~~~~~~~~l~~ 459 (464)
..+.+..-++++..
T Consensus 453 ~~~~av~~iE~v~r 466 (507)
T PHA03392 453 PLHKAIWYTEHVIR 466 (507)
T ss_pred HHHHHHHHHHHHHh
Confidence 44555555555543
|
|
| >PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-46 Score=381.15 Aligned_cols=382 Identities=24% Similarity=0.337 Sum_probs=223.2
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEccCCCCCCCCCCc-cC---------
Q 012412 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGYAQA-ES--------- 84 (464)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~--------- 84 (464)
|||++|. ++||+.++..|+++|++|||+||++++......-. .....+++..++.+......... ..
T Consensus 2 kvLv~p~-~~SH~~~~~~l~~~L~~rGH~VTvl~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (500)
T PF00201_consen 2 KVLVFPM-AYSHFIFMRPLAEELAERGHNVTVLTPSPSSSLNP--SKPSNIRFETYPDPYPEEEFEEIFPEFISKFFSES 78 (500)
T ss_dssp -----------SHHHHHHHHHHHHHH-TTSEEEHHHHHHT--------S-CCEEEE-----TT------TTHHHHHHHHH
T ss_pred EEEEeCC-CcCHHHHHHHHHHHHHhcCCceEEEEeeccccccc--ccccceeeEEEcCCcchHHHhhhhHHHHHHHhhhc
Confidence 7888885 77999999999999999999999999864322221 12456677776644433111111 00
Q ss_pred -----HHHHHHHH---HHhCcHHHH------HHHHHhcCCCCCccEEEeCCchhhHHHHHHHcCCccEEEecchHHHHHH
Q 012412 85 -----IEAYLERF---WQIGPQTLT------ELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYI 150 (464)
Q Consensus 85 -----~~~~~~~~---~~~~~~~l~------~~~~~l~~~~~p~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~ 150 (464)
....+..+ .......++ ++++.+.. .++|++|+|.+..|+..+|+.+++|.+++.+.....
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~C~~~l~d~~l~~~l~~--~~fDlvI~d~f~~c~~~la~~l~iP~i~~~s~~~~~--- 153 (500)
T PF00201_consen 79 SFANSFWEMFKMLNAFFDFFSKSCEDLLSDPELMEQLKS--EKFDLVISDAFDPCGLALAHYLGIPVIIISSSTPMY--- 153 (500)
T ss_dssp CCHHHHHHHHHHHHCHHHS----E--EEEETTSTTHHHH--HHHCT-EEEEEESSHHHHHHHHHHTHHHHHHCCSCS---
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHh--hccccceEeeccchhHHHHHHhcCCeEEEecccccc---
Confidence 01111110 111111111 11111221 247999999999999999999999998754332100
Q ss_pred HhhhhcCcc-cCCCCCCceeCCCCCCCCCCCCCCccccCCCCch--HHHHHHHHHhh-h------------------ccC
Q 012412 151 YYHVKKGSL-ELPLTGNEILLPGMPPLEPQDMPSFIHDLGSYPA--VSYMMMKFQFE-N------------------IDK 208 (464)
Q Consensus 151 ~~~~~~~~~-~~p~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~------------------~~~ 208 (464)
...... ..| ..+.++|.. .....+.+.+..|..+.-. ...... .... . +.+
T Consensus 154 ---~~~~~~~g~p--~~psyvP~~-~s~~~~~msf~~Ri~N~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (500)
T PF00201_consen 154 ---DLSSFSGGVP--SPPSYVPSM-FSDFSDRMSFWQRIKNFLFYLYFRFIF-RYFFSPQDKLYKKYFGFPFSFRELLSN 226 (500)
T ss_dssp ---CCTCCTSCCC--TSTTSTTCB-CCCSGTTSSSST--TTSHHHHHHHHHH-HHGGGS-TTS-EEESS-GGGCHHHHHH
T ss_pred ---hhhhhccCCC--CChHHhccc-cccCCCccchhhhhhhhhhhhhhcccc-ccchhhHHHHHhhhcccccccHHHHHH
Confidence 000111 111 123345554 2344566677766655421 111111 1111 1 111
Q ss_pred CcEEEecchhhhhHHHHHHHHhcCCeeeecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEEeccc
Q 012412 209 ADWVLCNTFYELEEEVVEWLRKTWSLRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSF 288 (464)
Q Consensus 209 ~~~~l~~s~~~l~~~~~~~~~~~~~~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~ 288 (464)
.+.+++|+.+.++++ .+.++ ++.+||++... -.+|.++++..|++...++++|||||||.
T Consensus 227 ~~l~l~ns~~~ld~p-rp~~p---~v~~vGgl~~~----------------~~~~l~~~~~~~~~~~~~~~vv~vsfGs~ 286 (500)
T PF00201_consen 227 ASLVLINSHPSLDFP-RPLLP---NVVEVGGLHIK----------------PAKPLPEELWNFLDSSGKKGVVYVSFGSI 286 (500)
T ss_dssp HHHCCSSTEEE-----HHHHC---TSTTGCGC-S--------------------TCHHHHHHHTSTTTTTEEEEEE-TSS
T ss_pred HHHHhhhccccCcCC-cchhh---cccccCccccc----------------cccccccccchhhhccCCCCEEEEecCcc
Confidence 223445555544431 11111 35556655332 12356788999999755789999999999
Q ss_pred cc-CCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChHHhhccccccceeccCChhHHHH
Q 012412 289 VE-LKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTME 367 (464)
Q Consensus 289 ~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~e 367 (464)
.. .+.+..+.+++++++++.+|||++.+... .. +++|+++.+|+||.+||+|+++++||||||+||++|
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~iW~~~~~~~----~~------l~~n~~~~~W~PQ~~lL~hp~v~~fitHgG~~s~~E 356 (500)
T PF00201_consen 287 VSSMPEEKLKEIAEAFENLPQRFIWKYEGEPP----EN------LPKNVLIVKWLPQNDLLAHPRVKLFITHGGLNSTQE 356 (500)
T ss_dssp STT-HHHHHHHHHHHHHCSTTEEEEEETCSHG----CH------HHTTEEEESS--HHHHHTSTTEEEEEES--HHHHHH
T ss_pred cchhHHHHHHHHHHHHhhCCCccccccccccc----cc------ccceEEEeccccchhhhhcccceeeeeccccchhhh
Confidence 75 45556889999999999999999976211 11 568999999999999999999999999999999999
Q ss_pred HHHhCCcEeccCCccchhhHHHHHHhHhcceeecc--CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHcCCC
Q 012412 368 ALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP--IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGS 445 (464)
Q Consensus 368 al~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~--~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~gg~ 445 (464)
|+++|||||++|+++||+.||+++++. |+|+.++ +++.++|.++|+++|+|+ +|++||+++++.++++...+..
T Consensus 357 a~~~gvP~l~~P~~~DQ~~na~~~~~~-G~g~~l~~~~~~~~~l~~ai~~vl~~~---~y~~~a~~ls~~~~~~p~~p~~ 432 (500)
T PF00201_consen 357 ALYHGVPMLGIPLFGDQPRNAARVEEK-GVGVVLDKNDLTEEELRAAIREVLENP---SYKENAKRLSSLFRDRPISPLE 432 (500)
T ss_dssp HHHCT--EEE-GCSTTHHHHHHHHHHT-TSEEEEGGGC-SHHHHHHHHHHHHHSH---HHHHHHHHHHHTTT--------
T ss_pred hhhccCCccCCCCcccCCccceEEEEE-eeEEEEEecCCcHHHHHHHHHHHHhhh---HHHHHHHHHHHHHhcCCCCHHH
Confidence 999999999999999999999999999 9999998 999999999999999997 9999999999999987444433
|
This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A .... |
| >TIGR01426 MGT glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-43 Score=345.42 Aligned_cols=363 Identities=23% Similarity=0.289 Sum_probs=246.3
Q ss_pred EcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEccCCCCCCCCCCc---cCHHHHHHHHHHh
Q 012412 19 LTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGYAQA---ESIEAYLERFWQI 95 (464)
Q Consensus 19 ~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~---~~~~~~~~~~~~~ 95 (464)
+.+|+.||++|+++||++|+++||+|+|++++.+.+.+. ..|+.|.+++........... .+....+..+...
T Consensus 1 ~~~p~~Ghv~P~l~lA~~L~~~Gh~V~~~~~~~~~~~v~----~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (392)
T TIGR01426 1 FNIPAHGHVNPTLGVVEELVARGHRVTYATTEEFAERVE----AAGAEFVLYGSALPPPDNPPENTEEEPIDIIEKLLDE 76 (392)
T ss_pred CCCCccccccccHHHHHHHHhCCCeEEEEeCHHHHHHHH----HcCCEEEecCCcCccccccccccCcchHHHHHHHHHH
Confidence 357899999999999999999999999999999999998 789999999865433111100 2334444545444
Q ss_pred CcHHHHHHHHHhcCCCCCccEEEeCCchhhHHHHHHHcCCccEEEecchHHHHHHHhhhhcCcccCCCCCCceeCCCCCC
Q 012412 96 GPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNEILLPGMPP 175 (464)
Q Consensus 96 ~~~~l~~~~~~l~~~~~p~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~p~~p~ 175 (464)
....+..+.+.+ .+++| |+||+|.++.++..+|+.+|||+|.+++.+.... .+.....+ . -+.+
T Consensus 77 ~~~~~~~l~~~~-~~~~p-DlVi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~----~~~~~~~~--~------~~~~-- 140 (392)
T TIGR01426 77 AEDVLPQLEEAY-KGDRP-DLIVYDIASWTGRLLARKWDVPVISSFPTFAANE----EFEEMVSP--A------GEGS-- 140 (392)
T ss_pred HHHHHHHHHHHh-cCCCC-CEEEECCccHHHHHHHHHhCCCEEEEehhhcccc----cccccccc--c------chhh--
Confidence 444444444333 33455 9999999888899999999999998865431100 00000000 0 0000
Q ss_pred CCCCCCCCccccCCCCchHHHHHHHHHh-hh-------ccCCcEEEecchhhhhHHHHHHHHhcCCeeeecccCCCcccc
Q 012412 176 LEPQDMPSFIHDLGSYPAVSYMMMKFQF-EN-------IDKADWVLCNTFYELEEEVVEWLRKTWSLRTIGPTIPSFYLD 247 (464)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-------~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~vgp~~~~~~~~ 247 (464)
.......... .......+.+++. +.. .. ....+..+..+.+.|++....++ .++.++||+....
T Consensus 141 ~~~~~~~~~~-~~~~~~~~~~~r~-~~gl~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~---~~~~~~Gp~~~~~--- 212 (392)
T TIGR01426 141 AEEGAIAERG-LAEYVARLSALLE-EHGITTPPVEFLAAPRRDLNLVYTPKAFQPAGETFD---DSFTFVGPCIGDR--- 212 (392)
T ss_pred hhhhccccch-hHHHHHHHHHHHH-HhCCCCCCHHHHhcCCcCcEEEeCChHhCCCccccC---CCeEEECCCCCCc---
Confidence 0000000000 0000011222211 111 00 01112234444444443111111 1488899875541
Q ss_pred ccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhh
Q 012412 248 KQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFS 327 (464)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~ 327 (464)
.+...|.....++++||+|+||........++.+++++++.+.+++|+.+.... .+.+.
T Consensus 213 ------------------~~~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~g~~~~---~~~~~ 271 (392)
T TIGR01426 213 ------------------KEDGSWERPGDGRPVVLISLGTVFNNQPSFYRTCVEAFRDLDWHVVLSVGRGVD---PADLG 271 (392)
T ss_pred ------------------cccCCCCCCCCCCCEEEEecCccCCCCHHHHHHHHHHHhcCCCeEEEEECCCCC---hhHhc
Confidence 111125544467889999999987666678899999999999999998865421 11221
Q ss_pred hhccCCCcEEEEeccChHHhhccccccceeccCChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeecc--CcC
Q 012412 328 DETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP--IVK 405 (464)
Q Consensus 328 ~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~--~~~ 405 (464)
+ .++|+.+.+|+|+.++|+++++ ||||||.||++||+++|+|+|++|...||+.||+++++. |+|..+. +++
T Consensus 272 ~---~~~~v~~~~~~p~~~ll~~~~~--~I~hgG~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~-g~g~~l~~~~~~ 345 (392)
T TIGR01426 272 E---LPPNVEVRQWVPQLEILKKADA--FITHGGMNSTMEALFNGVPMVAVPQGADQPMTARRIAEL-GLGRHLPPEEVT 345 (392)
T ss_pred c---CCCCeEEeCCCCHHHHHhhCCE--EEECCCchHHHHHHHhCCCEEecCCcccHHHHHHHHHHC-CCEEEeccccCC
Confidence 1 6789999999999999999999 999999999999999999999999999999999999999 9999987 889
Q ss_pred HHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHH
Q 012412 406 RDAIADCISEILEGERGKELRRNAGKWRKLAKEA 439 (464)
Q Consensus 406 ~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~ 439 (464)
+++|.++|.++|.|+ +|+++++++++.+++.
T Consensus 346 ~~~l~~ai~~~l~~~---~~~~~~~~l~~~~~~~ 376 (392)
T TIGR01426 346 AEKLREAVLAVLSDP---RYAERLRKMRAEIREA 376 (392)
T ss_pred HHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHc
Confidence 999999999999997 9999999999999863
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. |
| >cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-42 Score=340.34 Aligned_cols=362 Identities=17% Similarity=0.195 Sum_probs=236.8
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEccCCCCCCCCC----------Ccc
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGYA----------QAE 83 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~----------~~~ 83 (464)
|||+|++.++.||++|+++||++|++|||+|+|++++.+.+.+. ..|+.|.+++......... ...
T Consensus 1 mrIl~~~~p~~GHv~P~l~la~~L~~rGh~V~~~t~~~~~~~v~----~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (401)
T cd03784 1 MRVLITTIGSRGDVQPLVALAWALRAAGHEVRVATPPEFADLVE----AAGLEFVPVGGDPDELLASPERNAGLLLLGPG 76 (401)
T ss_pred CeEEEEeCCCcchHHHHHHHHHHHHHCCCeEEEeeCHhHHHHHH----HcCCceeeCCCCHHHHHhhhhhcccccccchH
Confidence 69999999999999999999999999999999999998888888 7889999998543220000 011
Q ss_pred CHHHHHHHHHHhCcHHHHHHHHHhcCCCCCccEEEeCCchhhHHHHHHHcCCccEEEecchHHHHHHHhhhhcCcccCCC
Q 012412 84 SIEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPL 163 (464)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p~ 163 (464)
........+.......+.++++.+. +++| |+||+|.+..++..+|+++|||++.++++++... ..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p-Dlvi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~--------~~----- 141 (401)
T cd03784 77 LLLGALRLLRREAEAMLDDLVAAAR-DWGP-DLVVADPLAFAGAVAAEALGIPAVRLLLGPDTPT--------SA----- 141 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc-ccCC-CEEEeCcHHHHHHHHHHHhCCCeEEeecccCCcc--------cc-----
Confidence 1222333344444444555555443 3455 9999999888899999999999999887652211 00
Q ss_pred CCCceeCCCCCCCCCCCCCCc--cccCCCCchHHHHHHHHHhhhcc--C-------CcEEEecchhhhhHHHHHHHHhcC
Q 012412 164 TGNEILLPGMPPLEPQDMPSF--IHDLGSYPAVSYMMMKFQFENID--K-------ADWVLCNTFYELEEEVVEWLRKTW 232 (464)
Q Consensus 164 ~~~~~~~p~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~--~-------~~~~l~~s~~~l~~~~~~~~~~~~ 232 (464)
. .|+......... ............... +....+. . .+..+....+.+.+...++..
T Consensus 142 ------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 209 (401)
T cd03784 142 ------F--PPPLGRANLRLYALLEAELWQDLLGAWLR-ARRRRLGLPPLSLLDGSDVPELYGFSPAVLPPPPDWPR--- 209 (401)
T ss_pred ------C--CCccchHHHHHHHHHHHHHHHHHHHHHHH-HHHHhcCCCCCcccccCCCcEEEecCcccCCCCCCccc---
Confidence 0 000000000000 000000000000000 0000000 0 001111111100000000000
Q ss_pred Ceeeec-ccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEEeccccc-CCHHHHHHHHHHHhhCCCeE
Q 012412 233 SLRTIG-PTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVE-LKAEEMEELAWGLKSSDQHF 310 (464)
Q Consensus 233 ~~~~vg-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~ 310 (464)
+..++| ++... +.....+.++..|++. ++++|||++||... ...+....++++++..+.++
T Consensus 210 ~~~~~g~~~~~~---------------~~~~~~~~~~~~~~~~--~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~~~~~ 272 (401)
T cd03784 210 FDLVTGYGFRDV---------------PYNGPPPPELWLFLAA--GRPPVYVGFGSMVVRDPEALARLDVEAVATLGQRA 272 (401)
T ss_pred cCcEeCCCCCCC---------------CCCCCCCHHHHHHHhC--CCCcEEEeCCCCcccCHHHHHHHHHHHHHHcCCeE
Confidence 122222 11110 0001124667778764 57899999999875 45678888999999999999
Q ss_pred EEEEcCcccCcCChhhhhhccCCCcEEEEeccChHHhhccccccceeccCChhHHHHHHHhCCcEeccCCccchhhHHHH
Q 012412 311 LWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKY 390 (464)
Q Consensus 311 i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~r 390 (464)
+|+++...... .. .++|+++.+|+||.++|++|++ ||||||+||++||+++|||+|++|...||+.||++
T Consensus 273 i~~~g~~~~~~------~~--~~~~v~~~~~~p~~~ll~~~d~--~I~hgG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~ 342 (401)
T cd03784 273 ILSLGWGGLGA------ED--LPDNVRVVDFVPHDWLLPRCAA--VVHHGGAGTTAAALRAGVPQLVVPFFGDQPFWAAR 342 (401)
T ss_pred EEEccCccccc------cC--CCCceEEeCCCCHHHHhhhhhe--eeecCCchhHHHHHHcCCCEEeeCCCCCcHHHHHH
Confidence 99997653321 11 6799999999999999999999 99999999999999999999999999999999999
Q ss_pred HHhHhcceeecc--CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHH
Q 012412 391 ILDVWKTGLKFP--IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKE 438 (464)
Q Consensus 391 l~~~~G~g~~l~--~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~ 438 (464)
+++. |+|+.+. .++.+.|.++++++|++ .+++++.+.++.+++
T Consensus 343 ~~~~-G~g~~l~~~~~~~~~l~~al~~~l~~----~~~~~~~~~~~~~~~ 387 (401)
T cd03784 343 VAEL-GAGPALDPRELTAERLAAALRRLLDP----PSRRRAAALLRRIRE 387 (401)
T ss_pred HHHC-CCCCCCCcccCCHHHHHHHHHHHhCH----HHHHHHHHHHHHHHh
Confidence 9999 9999997 77999999999999997 566677777777764
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
| >COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-40 Score=323.24 Aligned_cols=390 Identities=22% Similarity=0.297 Sum_probs=242.4
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEccCCCCCCCCCCccCHHHHHHH-
Q 012412 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGYAQAESIEAYLER- 91 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~- 91 (464)
+|||+|+..+.+||++|+++|+++|.++||+|+|+|++.+.+.+. ..|+.|..++.. +. ............+.
T Consensus 1 ~mkil~~~~~~~Ghv~p~~aL~~eL~~~gheV~~~~~~~~~~~ve----~ag~~f~~~~~~-~~-~~~~~~~~~~~~~~~ 74 (406)
T COG1819 1 RMKILFVVCGAYGHVNPCLALGKELRRRGHEVVFASTGKFKEFVE----AAGLAFVAYPIR-DS-ELATEDGKFAGVKSF 74 (406)
T ss_pred CceEEEEeccccccccchHHHHHHHHhcCCeEEEEeCHHHHHHHH----HhCcceeecccc-CC-hhhhhhhhhhccchh
Confidence 579999999999999999999999999999999999999999999 677777777743 21 11111111111111
Q ss_pred --HHHhCcHHHHHHHHHhcCCCCCccEEEeCCchhhHHHHHHHcCCccEEEecchHHHHHHHhhhhcCcccCCCCCCcee
Q 012412 92 --FWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNEIL 169 (464)
Q Consensus 92 --~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 169 (464)
..........++++-+.+. .| |+|+.|.... ...+++..++|++.......+.. .....+.+.. .
T Consensus 75 ~~~~~~~~~~~~~~~~~~~e~-~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~----~ 141 (406)
T COG1819 75 RRLLQQFKKLIRELLELLREL-EP-DLVVDDARLS-LGLAARLLGIPVVGINVAPYTPL------PAAGLPLPPV----G 141 (406)
T ss_pred HHHhhhhhhhhHHHHHHHHhc-ch-hhhhcchhhh-hhhhhhhcccchhhhhhhhccCC------cccccCcccc----c
Confidence 2222222333444444443 45 9999885554 44899999999887544331111 1011110000 0
Q ss_pred CCCCCCCCCCCCCCccccCCCCc-hH-HHHHHHHHhhhccCC---cEEEecchhhhhHHHHHHHHhc-CCeeeecccCCC
Q 012412 170 LPGMPPLEPQDMPSFIHDLGSYP-AV-SYMMMKFQFENIDKA---DWVLCNTFYELEEEVVEWLRKT-WSLRTIGPTIPS 243 (464)
Q Consensus 170 ~p~~p~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~---~~~l~~s~~~l~~~~~~~~~~~-~~~~~vgp~~~~ 243 (464)
+-+...............+.... .+ ..... +....+... -..+..+-+.++....+..... ....++++.+.
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~- 219 (406)
T COG1819 142 IAGKLPIPLYPLPPRLVRPLIFARSWLPKLVV-RRNLGLELGLPNIRRLFASGPLLEIAYTDVLFPPGDRLPFIGPYIG- 219 (406)
T ss_pred ccccccccccccChhhccccccchhhhhhhhh-hhhccccccccchHHHhcCCCCccccccccccCCCCCCCCCcCccc-
Confidence 00000000000000000000000 00 00000 000000000 0000001011110000000000 00111221111
Q ss_pred ccccccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCC
Q 012412 244 FYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLP 323 (464)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~ 323 (464)
+.......+...|+. .++++||+|+||.... .++++.++++++.++.++|+..++. .....
T Consensus 220 ---------------~~~~~~~~~~~~~~~--~d~~~vyvslGt~~~~-~~l~~~~~~a~~~l~~~vi~~~~~~-~~~~~ 280 (406)
T COG1819 220 ---------------PLLGEAANELPYWIP--ADRPIVYVSLGTVGNA-VELLAIVLEALADLDVRVIVSLGGA-RDTLV 280 (406)
T ss_pred ---------------cccccccccCcchhc--CCCCeEEEEcCCcccH-HHHHHHHHHHHhcCCcEEEEecccc-ccccc
Confidence 111111233333322 4688999999999866 8999999999999999999999662 11122
Q ss_pred hhhhhhccCCCcEEEEeccChHHhhccccccceeccCChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeecc-
Q 012412 324 KKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP- 402 (464)
Q Consensus 324 ~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~- 402 (464)
. .|+|+++.+|+||.++|+++++ ||||||+||++|||++|||+|++|...||+.||.|++++ |+|..++
T Consensus 281 ~-------~p~n~~v~~~~p~~~~l~~ad~--vI~hGG~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~-G~G~~l~~ 350 (406)
T COG1819 281 N-------VPDNVIVADYVPQLELLPRADA--VIHHGGAGTTSEALYAGVPLVVIPDGADQPLNAERVEEL-GAGIALPF 350 (406)
T ss_pred c-------CCCceEEecCCCHHHHhhhcCE--EEecCCcchHHHHHHcCCCEEEecCCcchhHHHHHHHHc-CCceecCc
Confidence 2 7899999999999999999999 999999999999999999999999999999999999999 9999998
Q ss_pred -CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHhh
Q 012412 403 -IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLACS 460 (464)
Q Consensus 403 -~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l~~~ 460 (464)
.++.+.|+++|+++|.|+ +|+++++++++.++++ +| ...+.++++++...
T Consensus 351 ~~l~~~~l~~av~~vL~~~---~~~~~~~~~~~~~~~~---~g--~~~~a~~le~~~~~ 401 (406)
T COG1819 351 EELTEERLRAAVNEVLADD---SYRRAAERLAEEFKEE---DG--PAKAADLLEEFARE 401 (406)
T ss_pred ccCCHHHHHHHHHHHhcCH---HHHHHHHHHHHHhhhc---cc--HHHHHHHHHHHHhc
Confidence 899999999999999997 9999999999999975 33 56677777775444
|
|
| >KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-38 Score=320.94 Aligned_cols=390 Identities=29% Similarity=0.409 Sum_probs=247.2
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCC--------CCceEEEccCCCCCCCCCCc-c
Q 012412 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSS--------SSIPLEAISDGYDEGGYAQA-E 83 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~--------~~~~~~~i~~~~~~~~~~~~-~ 83 (464)
..+++++++++.||++|+..+|+.|+++||+||++++............. ..+.+...+++++. ..... .
T Consensus 5 ~~~~il~~~p~~sH~~~~~~la~~L~~~gh~vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 83 (496)
T KOG1192|consen 5 KAHNILVPFPGQSHLNPMLQLAKRLAERGHNVTVVTPSFNALKLSKSSKSKSIKKINPPPFEFLTIPDGLPE-GWEDDDL 83 (496)
T ss_pred cceeEEEECCcccHHHHHHHHHHHHHHcCCceEEEEeechhcccCCcccceeeeeeecChHHhhhhhhhhcc-chHHHHH
Confidence 44667777779999999999999999999999999998765554410000 01111111111222 11100 0
Q ss_pred CHHHHHHHHHHhCcHHHHHHHHHhcC-CCCCccEEEeCCchhhHHHHHHHcC-CccEEEecchHHHHHHHhhhhcCcccC
Q 012412 84 SIEAYLERFWQIGPQTLTELVEKMNG-SDSPVDCIVYDSILLWALDVAKKFG-LLGAPFLTQSCAVDYIYYHVKKGSLEL 161 (464)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~~~~~l~~-~~~p~DlVI~D~~~~~~~~~A~~~g-iP~v~~~~~~~~~~~~~~~~~~~~~~~ 161 (464)
........+...+...+.+.+..+.. ...++|++|+|.+..+...+|.... ++...+....+....+..+....
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~g~~~~~~---- 159 (496)
T KOG1192|consen 84 DISESLLELNKTCEDLLRDPLEKLLLLKSEKFDLIISDPFLGLFLLLAIPSFVIPLLSFPTSSAVLLALGLPSPLS---- 159 (496)
T ss_pred HHHHHHHHHHHHHHHHHhchHHHHHHhhcCCccEEEechhhHHHHHhcccceEEEeecccCchHHHHhcCCcCccc----
Confidence 11111334444444455554433322 2132799999998777777776665 88888777776655433332211
Q ss_pred CCCCCceeCCCCCCCCCCCCCCccccCCCCch--HH------------HHHHHHHh-----------hhccCCcEEEecc
Q 012412 162 PLTGNEILLPGMPPLEPQDMPSFIHDLGSYPA--VS------------YMMMKFQF-----------ENIDKADWVLCNT 216 (464)
Q Consensus 162 p~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~--~~------------~~~~~~~~-----------~~~~~~~~~l~~s 216 (464)
++|........+.+.+..+..+... .. ........ ....+....++++
T Consensus 160 -------~~p~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ln~ 232 (496)
T KOG1192|consen 160 -------YVPSPFSLSSGDDMSFPERVPNLIKKDLPSFLFSLSDDRKQDKISKELLGDILNWKPTASGIIVNASFIFLNS 232 (496)
T ss_pred -------ccCcccCccccccCcHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCCcccccccHHHhhhcCeEEEEcc
Confidence 1222211111122233322221100 00 00000111 1112233444555
Q ss_pred hhhhhHHHHHHHHhcCCeeeecccCCCccccccccCcccccccccccchhHHHHHhhcCCC--CceEEEEecccc---cC
Q 012412 217 FYELEEEVVEWLRKTWSLRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAK--ESVVYVSYGSFV---EL 291 (464)
Q Consensus 217 ~~~l~~~~~~~~~~~~~~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~v~vs~Gs~~---~~ 291 (464)
.+.++....+ ...++++|||+..... .. +. ....+|++..+. .++|||||||+. ..
T Consensus 233 ~~~~~~~~~~---~~~~v~~IG~l~~~~~--------~~-----~~---~~~~~wl~~~~~~~~~vvyvSfGS~~~~~~l 293 (496)
T KOG1192|consen 233 NPLLDFEPRP---LLPKVIPIGPLHVKDS--------KQ-----KS---PLPLEWLDILDESRHSVVYISFGSMVNSADL 293 (496)
T ss_pred CcccCCCCCC---CCCCceEECcEEecCc--------cc-----cc---cccHHHHHHHhhccCCeEEEECCcccccccC
Confidence 4432220110 1236999999977611 00 00 123445554433 389999999998 78
Q ss_pred CHHHHHHHHHHHhhC-CCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChHHh-hccccccceeccCChhHHHHHH
Q 012412 292 KAEEMEELAWGLKSS-DQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEV-LAHEATGCFVTHCGWNSTMEAL 369 (464)
Q Consensus 292 ~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~l-l~~~~~~~vI~HgG~~s~~eal 369 (464)
+.+....++.+++.+ ++.|+|++.......+++++.++ .++||.+.+|+||.++ |.|.++++||||||+||++|++
T Consensus 294 p~~~~~~l~~~l~~~~~~~FiW~~~~~~~~~~~~~~~~~--~~~nV~~~~W~PQ~~lll~H~~v~~FvTHgG~nSt~E~~ 371 (496)
T KOG1192|consen 294 PEEQKKELAKALESLQGVTFLWKYRPDDSIYFPEGLPNR--GRGNVVLSKWAPQNDLLLDHPAVGGFVTHGGWNSTLESI 371 (496)
T ss_pred CHHHHHHHHHHHHhCCCceEEEEecCCcchhhhhcCCCC--CcCceEEecCCCcHHHhcCCCcCcEEEECCcccHHHHHH
Confidence 999999999999999 88999999775433344544332 2578999999999998 5899999999999999999999
Q ss_pred HhCCcEeccCCccchhhHHHHHHhHhcceeecc--CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHH
Q 012412 370 SLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP--IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEA 439 (464)
Q Consensus 370 ~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~--~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~ 439 (464)
++|||+|++|+++||+.||+++++. |.|..+. +.+.+.+..++.+++.++ +|+++++++++.++++
T Consensus 372 ~~GvP~v~~Plf~DQ~~Na~~i~~~-g~~~v~~~~~~~~~~~~~~~~~il~~~---~y~~~~~~l~~~~~~~ 439 (496)
T KOG1192|consen 372 YSGVPMVCVPLFGDQPLNARLLVRH-GGGGVLDKRDLVSEELLEAIKEILENE---EYKEAAKRLSEILRDQ 439 (496)
T ss_pred hcCCceecCCccccchhHHHHHHhC-CCEEEEehhhcCcHHHHHHHHHHHcCh---HHHHHHHHHHHHHHcC
Confidence 9999999999999999999999999 7666665 676666999999999998 9999999999999864
|
|
| >PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.2e-27 Score=227.97 Aligned_cols=320 Identities=17% Similarity=0.157 Sum_probs=203.7
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEccCCCCCCCCCCccCHHHHHHHHH
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGYAQAESIEAYLERFW 93 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 93 (464)
.||++...|+.||++|.+++|++|.++||+|.|++.....+.-. ....++.++.++.. ++..... ...+....
T Consensus 2 ~~i~~~~GGTGGHi~Pala~a~~l~~~g~~v~~vg~~~~~e~~l--~~~~g~~~~~~~~~----~l~~~~~-~~~~~~~~ 74 (352)
T PRK12446 2 KKIVFTGGGSAGHVTPNLAIIPYLKEDNWDISYIGSHQGIEKTI--IEKENIPYYSISSG----KLRRYFD-LKNIKDPF 74 (352)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEECCCcccccc--CcccCCcEEEEecc----CcCCCch-HHHHHHHH
Confidence 47888888899999999999999999999999999776544322 22457888888632 1111111 12222222
Q ss_pred HhCcHH--HHHHHHHhcCCCCCccEEEeCCchh--hHHHHHHHcCCccEEEecchHHHHHHHhhhhcCcccCCCCCCcee
Q 012412 94 QIGPQT--LTELVEKMNGSDSPVDCIVYDSILL--WALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNEIL 169 (464)
Q Consensus 94 ~~~~~~--l~~~~~~l~~~~~p~DlVI~D~~~~--~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 169 (464)
...... ...++++. +| |+||+...+. .+..+|+.+++|+++...+.
T Consensus 75 ~~~~~~~~~~~i~~~~----kP-dvvi~~Ggy~s~p~~~aa~~~~~p~~i~e~n~------------------------- 124 (352)
T PRK12446 75 LVMKGVMDAYVRIRKL----KP-DVIFSKGGFVSVPVVIGGWLNRVPVLLHESDM------------------------- 124 (352)
T ss_pred HHHHHHHHHHHHHHhc----CC-CEEEecCchhhHHHHHHHHHcCCCEEEECCCC-------------------------
Confidence 221111 12233332 56 9999987553 36889999999999865543
Q ss_pred CCCCCCCCCCCCCCccccCCCCchHHHHHHHHHhhhccCCcEEEecchhhhhHHHHHHHHhcCCeeeecccCCCcccccc
Q 012412 170 LPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTWSLRTIGPTIPSFYLDKQ 249 (464)
Q Consensus 170 ~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~vgp~~~~~~~~~~ 249 (464)
+|++ ..+.+. +. .+.+ +.+|++- ...++. .++.++|+.+.....
T Consensus 125 ~~g~--------------------~nr~~~-~~------a~~v-~~~f~~~----~~~~~~-~k~~~tG~Pvr~~~~--- 168 (352)
T PRK12446 125 TPGL--------------------ANKIAL-RF------ASKI-FVTFEEA----AKHLPK-EKVIYTGSPVREEVL--- 168 (352)
T ss_pred CccH--------------------HHHHHH-Hh------hCEE-EEEccch----hhhCCC-CCeEEECCcCCcccc---
Confidence 2222 233333 22 2232 3333321 111221 146788866554210
Q ss_pred ccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccCCH-HHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhh
Q 012412 250 IEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKA-EEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSD 328 (464)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~-~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~ 328 (464)
....+...+.++..+++++|+|..||...... +.+..++..+.. +.+++|++|....+ +...
T Consensus 169 ------------~~~~~~~~~~~~l~~~~~~iLv~GGS~Ga~~in~~~~~~l~~l~~-~~~vv~~~G~~~~~---~~~~- 231 (352)
T PRK12446 169 ------------KGNREKGLAFLGFSRKKPVITIMGGSLGAKKINETVREALPELLL-KYQIVHLCGKGNLD---DSLQ- 231 (352)
T ss_pred ------------cccchHHHHhcCCCCCCcEEEEECCccchHHHHHHHHHHHHhhcc-CcEEEEEeCCchHH---HHHh-
Confidence 01112222333333567899999999874322 333334444432 47888988865221 1111
Q ss_pred hccCCCcEEEEecc-ChH-HhhccccccceeccCChhHHHHHHHhCCcEeccCCc-----cchhhHHHHHHhHhcceeec
Q 012412 329 ETLTSHKSLVVSWC-PQL-EVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQW-----SDQSTNAKYILDVWKTGLKF 401 (464)
Q Consensus 329 ~~~~~~nv~~~~~~-p~~-~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~-----~DQ~~na~rl~~~~G~g~~l 401 (464)
...++.+.+|+ ++. ++++.+|+ +|||||.+|++|++++|+|+|++|+. .||..||+.+++. |+|..+
T Consensus 232 ---~~~~~~~~~f~~~~m~~~~~~adl--vIsr~G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~~-g~~~~l 305 (352)
T PRK12446 232 ---NKEGYRQFEYVHGELPDILAITDF--VISRAGSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESFERQ-GYASVL 305 (352)
T ss_pred ---hcCCcEEecchhhhHHHHHHhCCE--EEECCChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHHHHC-CCEEEc
Confidence 11355666887 544 89999999 99999999999999999999999975 4899999999999 999998
Q ss_pred c--CcCHHHHHHHHHHHhcCCchHHHHHHHHH
Q 012412 402 P--IVKRDAIADCISEILEGERGKELRRNAGK 431 (464)
Q Consensus 402 ~--~~~~~~l~~~i~~ll~~~~~~~~~~~a~~ 431 (464)
. +++++.|.+++.+++.|+ +.+++++++
T Consensus 306 ~~~~~~~~~l~~~l~~ll~~~--~~~~~~~~~ 335 (352)
T PRK12446 306 YEEDVTVNSLIKHVEELSHNN--EKYKTALKK 335 (352)
T ss_pred chhcCCHHHHHHHHHHHHcCH--HHHHHHHHH
Confidence 7 899999999999999885 245544433
|
|
| >PF13528 Glyco_trans_1_3: Glycosyl transferase family 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.1e-27 Score=222.95 Aligned_cols=304 Identities=18% Similarity=0.212 Sum_probs=194.4
Q ss_pred cEEEE-EcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEccCCCCCCCCCCccCHHHHHHHH
Q 012412 14 AHCLV-LTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGYAQAESIEAYLERF 92 (464)
Q Consensus 14 ~~il~-~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 92 (464)
|||+| +...|.||+.++++||++| |||+|+|++.....+.+. .. +....++.-... ......+........
T Consensus 1 MkIl~~v~~~G~GH~~R~~~la~~L--rg~~v~~~~~~~~~~~~~----~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 72 (318)
T PF13528_consen 1 MKILFYVQGHGLGHASRCLALARAL--RGHEVTFITSGPAPEFLK----PR-FPVREIPGLGPI-QENGRLDRWKTVRNN 72 (318)
T ss_pred CEEEEEeCCCCcCHHHHHHHHHHHH--ccCceEEEEcCCcHHHhc----cc-cCEEEccCceEe-ccCCccchHHHHHHH
Confidence 69996 6666889999999999999 699999999987665554 33 556666421111 111111112222211
Q ss_pred H---HhCcHHHHHHHHHhcCCCCCccEEEeCCchhhHHHHHHHcCCccEEEecchHHHHHHHhhhhcCcccCCCCCCcee
Q 012412 93 W---QIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNEIL 169 (464)
Q Consensus 93 ~---~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 169 (464)
. ......++.+++.+.+. +| |+||+| +.+.+..+|+..|+|++.+........
T Consensus 73 ~~~~~~~~~~~~~~~~~l~~~-~p-DlVIsD-~~~~~~~aa~~~giP~i~i~~~~~~~~--------------------- 128 (318)
T PF13528_consen 73 IRWLARLARRIRREIRWLREF-RP-DLVISD-FYPLAALAARRAGIPVIVISNQYWFLH--------------------- 128 (318)
T ss_pred HHhhHHHHHHHHHHHHHHHhc-CC-CEEEEc-ChHHHHHHHHhcCCCEEEEEehHHccc---------------------
Confidence 1 12233444554444432 55 999999 555578999999999998877652210
Q ss_pred CCCCCCCCCCCCCCccccCCCCchHHHHHHHHHhhh--ccCCcEEEecchhhhhHHHHHHHHhcCCeeeecccCCCcccc
Q 012412 170 LPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFEN--IDKADWVLCNTFYELEEEVVEWLRKTWSLRTIGPTIPSFYLD 247 (464)
Q Consensus 170 ~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~vgp~~~~~~~~ 247 (464)
+.. . . .....+..++. +.... ...++..+..++. .. .........+||+......
T Consensus 129 -~~~---~---~-------~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~-~~------~~~~~~~~~~~p~~~~~~~- 185 (318)
T PF13528_consen 129 -PNF---W---L-------PWDQDFGRLIE-RYIDRYHFPPADRRLALSFY-PP------LPPFFRVPFVGPIIRPEIR- 185 (318)
T ss_pred -ccC---C---c-------chhhhHHHHHH-HhhhhccCCcccceecCCcc-cc------ccccccccccCchhccccc-
Confidence 000 0 0 00011222222 22221 2344444444433 11 0111135567777554110
Q ss_pred ccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhCC-CeEEEEEcCcccCcCChhh
Q 012412 248 KQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSD-QHFLWVVRESEQAKLPKKF 326 (464)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~-~~~i~~~~~~~~~~~~~~~ 326 (464)
+.. ..+++.|+|++|..... .+.+++++++ .++++. +... . ..
T Consensus 186 ----------------------~~~--~~~~~~iLv~~gg~~~~------~~~~~l~~~~~~~~~v~-g~~~-~--~~-- 229 (318)
T PF13528_consen 186 ----------------------ELP--PEDEPKILVYFGGGGPG------DLIEALKALPDYQFIVF-GPNA-A--DP-- 229 (318)
T ss_pred ----------------------ccC--CCCCCEEEEEeCCCcHH------HHHHHHHhCCCCeEEEE-cCCc-c--cc--
Confidence 000 12456899999987632 6677787776 566655 4431 0 11
Q ss_pred hhhccCCCcEEEEecc--ChHHhhccccccceeccCChhHHHHHHHhCCcEeccCC--ccchhhHHHHHHhHhcceeecc
Q 012412 327 SDETLTSHKSLVVSWC--PQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQ--WSDQSTNAKYILDVWKTGLKFP 402 (464)
Q Consensus 327 ~~~~~~~~nv~~~~~~--p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~--~~DQ~~na~rl~~~~G~g~~l~ 402 (464)
.++|+.+.+|. ...++|+.|++ +|+|||+||++|++++|+|+|++|. ..||..||++++++ |+|..++
T Consensus 230 -----~~~ni~~~~~~~~~~~~~m~~ad~--vIs~~G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~-G~~~~~~ 301 (318)
T PF13528_consen 230 -----RPGNIHVRPFSTPDFAELMAAADL--VISKGGYTTISEALALGKPALVIPRPGQDEQEYNARKLEEL-GLGIVLS 301 (318)
T ss_pred -----cCCCEEEeecChHHHHHHHHhCCE--EEECCCHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHC-CCeEEcc
Confidence 46899999987 34589999999 9999999999999999999999999 67999999999999 9999998
Q ss_pred --CcCHHHHHHHHHHH
Q 012412 403 --IVKRDAIADCISEI 416 (464)
Q Consensus 403 --~~~~~~l~~~i~~l 416 (464)
+++++.|.++|+++
T Consensus 302 ~~~~~~~~l~~~l~~~ 317 (318)
T PF13528_consen 302 QEDLTPERLAEFLERL 317 (318)
T ss_pred cccCCHHHHHHHHhcC
Confidence 99999999999864
|
|
| >COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.1e-23 Score=196.75 Aligned_cols=311 Identities=18% Similarity=0.204 Sum_probs=197.3
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCC-eEEEEeCcccccccccCCCCCCceEEEccCCCCCCCCCCccCHHHHHHHH
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGI-KVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGYAQAESIEAYLERF 92 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh-~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 92 (464)
++|++...++.||+.|.++|+++|.++|+ +|.++.+....+... ....++.++.++.+... ...........++.+
T Consensus 1 ~~ivl~~gGTGGHv~pAlAl~~~l~~~g~~~v~~~~~~~~~e~~l--~~~~~~~~~~I~~~~~~-~~~~~~~~~~~~~~~ 77 (357)
T COG0707 1 KKIVLTAGGTGGHVFPALALAEELAKRGWEQVIVLGTGDGLEAFL--VKQYGIEFELIPSGGLR-RKGSLKLLKAPFKLL 77 (357)
T ss_pred CeEEEEeCCCccchhHHHHHHHHHHhhCccEEEEecccccceeee--ccccCceEEEEeccccc-ccCcHHHHHHHHHHH
Confidence 36788888889999999999999999999 688887665555444 23447888888744322 111111122222222
Q ss_pred HHhCcHHHHHHHHHhcCCCCCccEEEeCCch--hhHHHHHHHcCCccEEEecchHHHHHHHhhhhcCcccCCCCCCceeC
Q 012412 93 WQIGPQTLTELVEKMNGSDSPVDCIVYDSIL--LWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNEILL 170 (464)
Q Consensus 93 ~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~--~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 170 (464)
.. ....+.+++++ +| |+||+...+ ..+..+|..+|||.++..+.. .
T Consensus 78 ~~--~~~a~~il~~~----kP-d~vig~Ggyvs~P~~~Aa~~~~iPv~ihEqn~-------------------------~ 125 (357)
T COG0707 78 KG--VLQARKILKKL----KP-DVVIGTGGYVSGPVGIAAKLLGIPVIIHEQNA-------------------------V 125 (357)
T ss_pred HH--HHHHHHHHHHc----CC-CEEEecCCccccHHHHHHHhCCCCEEEEecCC-------------------------C
Confidence 21 12244555554 56 999996555 446888999999999876654 3
Q ss_pred CCCCCCCCCCCCCccccCCCCchHHHHHHHHHhhhccCCcEEEecchhhhhHHHHHHHHhcCCeeeec-ccCCCcccccc
Q 012412 171 PGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTWSLRTIG-PTIPSFYLDKQ 249 (464)
Q Consensus 171 p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~vg-p~~~~~~~~~~ 249 (464)
||. .++++. + .++.+ ..+|+..+. .....++..+| |+.+++.
T Consensus 126 ~G~--------------------ank~~~-~------~a~~V-~~~f~~~~~-----~~~~~~~~~tG~Pvr~~~~---- 168 (357)
T COG0707 126 PGL--------------------ANKILS-K------FAKKV-ASAFPKLEA-----GVKPENVVVTGIPVRPEFE---- 168 (357)
T ss_pred cch--------------------hHHHhH-H------hhcee-eeccccccc-----cCCCCceEEecCcccHHhh----
Confidence 333 223322 1 11222 222221110 00000255555 2222211
Q ss_pred ccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhC--CCeEEEEEcCcccCcCChhhh
Q 012412 250 IEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSS--DQHFLWVVRESEQAKLPKKFS 327 (464)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~~~~ 327 (464)
. ++.....+... .++++|+|.-||.... .+-+.+.+++..+ +.+++..++....+.....+.
T Consensus 169 ------------~-~~~~~~~~~~~-~~~~~ilV~GGS~Ga~--~ln~~v~~~~~~l~~~~~v~~~~G~~~~~~~~~~~~ 232 (357)
T COG0707 169 ------------E-LPAAEVRKDGR-LDKKTILVTGGSQGAK--ALNDLVPEALAKLANRIQVIHQTGKNDLEELKSAYN 232 (357)
T ss_pred ------------c-cchhhhhhhcc-CCCcEEEEECCcchhH--HHHHHHHHHHHHhhhCeEEEEEcCcchHHHHHHHHh
Confidence 0 01111111111 2678999999998731 2222233333333 467777777654332322221
Q ss_pred hhccCCCc-EEEEeccChH-HhhccccccceeccCChhHHHHHHHhCCcEeccCCc----cchhhHHHHHHhHhcceeec
Q 012412 328 DETLTSHK-SLVVSWCPQL-EVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQW----SDQSTNAKYILDVWKTGLKF 401 (464)
Q Consensus 328 ~~~~~~~n-v~~~~~~p~~-~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~----~DQ~~na~rl~~~~G~g~~l 401 (464)
..+ +.+.+|..++ .+++.+|+ |||++|.+|+.|++++|+|++.+|.. .||..||..+++. |.|..+
T Consensus 233 -----~~~~~~v~~f~~dm~~~~~~ADL--vIsRaGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~~~-gaa~~i 304 (357)
T COG0707 233 -----ELGVVRVLPFIDDMAALLAAADL--VISRAGALTIAELLALGVPAILVPYPPGADGHQEYNAKFLEKA-GAALVI 304 (357)
T ss_pred -----hcCcEEEeeHHhhHHHHHHhccE--EEeCCcccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHHHhC-CCEEEe
Confidence 122 7888999887 99999999 99999999999999999999999963 4899999999999 999999
Q ss_pred c--CcCHHHHHHHHHHHhcCC
Q 012412 402 P--IVKRDAIADCISEILEGE 420 (464)
Q Consensus 402 ~--~~~~~~l~~~i~~ll~~~ 420 (464)
. +++++.|.+.|.++++++
T Consensus 305 ~~~~lt~~~l~~~i~~l~~~~ 325 (357)
T COG0707 305 RQSELTPEKLAELILRLLSNP 325 (357)
T ss_pred ccccCCHHHHHHHHHHHhcCH
Confidence 8 899999999999999984
|
|
| >TIGR00661 MJ1255 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.7e-23 Score=198.50 Aligned_cols=309 Identities=15% Similarity=0.126 Sum_probs=174.0
Q ss_pred EEEE-EcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCce-EEEccCCCCCCCCCCccCHHHHHHHH
Q 012412 15 HCLV-LTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIP-LEAISDGYDEGGYAQAESIEAYLERF 92 (464)
Q Consensus 15 ~il~-~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~ 92 (464)
||+| ++..|.||+.|.++|+++|.+ ||+|+|++.......+. ..++. +..+|. ......+..-+....+...
T Consensus 1 ril~~~~g~G~GH~~r~~ala~~L~~-g~ev~~~~~~~~~~~~~----~~~~~~~~~~p~-~~~~~~~~~~~~~~~l~~~ 74 (321)
T TIGR00661 1 KILYSVCGEGFGHTTRSVAIGEALKN-DYEVSYIASGRSKNYIS----KYGFKVFETFPG-IKLKGEDGKVNIVKTLRNK 74 (321)
T ss_pred CEEEEEeccCccHHHHHHHHHHHHhC-CCeEEEEEcCCHHHhhh----hhcCcceeccCC-ceEeecCCcCcHHHHHHhh
Confidence 5777 556677999999999999999 99999999877444444 33443 333321 1110111111122222110
Q ss_pred HHhCcHHHHHHHHHhcCCCCCccEEEeCCchhhHHHHHHHcCCccEEEecchHHHHHHHhhhhcCcccCCCCCCceeCCC
Q 012412 93 WQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNEILLPG 172 (464)
Q Consensus 93 ~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~p~ 172 (464)
.......+.+.++.+. +.+| |+||+| +.+.+..+|+.+|||++.+..+.... .|+
T Consensus 75 ~~~~~~~~~~~~~~l~-~~~p-DlVi~d-~~~~~~~aA~~~~iP~i~i~~q~~~~----------------------~~~ 129 (321)
T TIGR00661 75 EYSPKKAIRREINIIR-EYNP-DLIISD-FEYSTVVAAKLLKIPVICISNQNYTR----------------------YPL 129 (321)
T ss_pred ccccHHHHHHHHHHHH-hcCC-CEEEEC-CchHHHHHHHhcCCCEEEEecchhhc----------------------CCc
Confidence 0111123334434333 3356 999999 66667889999999999776543110 111
Q ss_pred CCCCCCCCCCCccccCCCCchHHHHHHHHHhhhccCCcEEEecchhhhhHHHHHHHHhcCCeeeecccCCCccccccccC
Q 012412 173 MPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTWSLRTIGPTIPSFYLDKQIED 252 (464)
Q Consensus 173 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~vgp~~~~~~~~~~~~~ 252 (464)
. . +......+... ..+ ....+...+..++.... ..| +.... .+
T Consensus 130 ~-----------~---~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~--------~~p-----~~~~~------~~- 172 (321)
T TIGR00661 130 K-----------T---DLIVYPTMAAL-RIF--NERCERFIVPDYPFPYT--------ICP-----KIIKN------ME- 172 (321)
T ss_pred c-----------c---chhHHHHHHHH-HHh--ccccceEeeecCCCCCC--------CCc-----ccccc------CC-
Confidence 0 0 00011111122 111 12222332232221110 000 00000 00
Q ss_pred cccccccccccchhHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccC
Q 012412 253 DKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLT 332 (464)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 332 (464)
.+. ...+...+.. .+++.|++.+|+.. ...+++++++.+. +.++++.. +...+. .
T Consensus 173 -----~~~---~~~~~~~~~~--~~~~~iLv~~g~~~------~~~l~~~l~~~~~-~~~i~~~~--~~~~~~------~ 227 (321)
T TIGR00661 173 -----GPL---IRYDVDDVDN--YGEDYILVYIGFEY------RYKILELLGKIAN-VKFVCYSY--EVAKNS------Y 227 (321)
T ss_pred -----Ccc---cchhhhcccc--CCCCcEEEECCcCC------HHHHHHHHHhCCC-eEEEEeCC--CCCccc------c
Confidence 000 0111112221 23557888887753 2345677777654 22333222 111111 5
Q ss_pred CCcEEEEeccC--hHHhhccccccceeccCChhHHHHHHHhCCcEeccCCcc--chhhHHHHHHhHhcceeeccCcCHHH
Q 012412 333 SHKSLVVSWCP--QLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWS--DQSTNAKYILDVWKTGLKFPIVKRDA 408 (464)
Q Consensus 333 ~~nv~~~~~~p--~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~--DQ~~na~rl~~~~G~g~~l~~~~~~~ 408 (464)
++|+.+.+|.| ..++|+.|++ ||||||.+|++||+++|+|++++|... ||..||+.+++. |+|+.++..+. +
T Consensus 228 ~~~v~~~~~~~~~~~~~l~~ad~--vI~~~G~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~-g~~~~l~~~~~-~ 303 (321)
T TIGR00661 228 NENVEIRRITTDNFKELIKNAEL--VITHGGFSLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDL-GCGIALEYKEL-R 303 (321)
T ss_pred CCCEEEEECChHHHHHHHHhCCE--EEECCChHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHC-CCEEEcChhhH-H
Confidence 68999999997 3488999999 999999999999999999999999855 899999999999 99999982233 6
Q ss_pred HHHHHHHHhcCC
Q 012412 409 IADCISEILEGE 420 (464)
Q Consensus 409 l~~~i~~ll~~~ 420 (464)
+.+++.+++.|+
T Consensus 304 ~~~~~~~~~~~~ 315 (321)
T TIGR00661 304 LLEAILDIRNMK 315 (321)
T ss_pred HHHHHHhccccc
Confidence 666776777775
|
This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases. |
| >PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.5e-20 Score=179.61 Aligned_cols=324 Identities=15% Similarity=0.128 Sum_probs=190.9
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccc--cccccCCCCCCceEEEccCCCCCCCCCCccCHHHHHH
Q 012412 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFY--KSLHRDSSSSSIPLEAISDGYDEGGYAQAESIEAYLE 90 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 90 (464)
+|||+|+..+..||...++.|+++|.++||+|++++.+... +... ..++.++.++..-.. .......+.
T Consensus 1 ~~~i~i~~~g~gG~~~~~~~la~~L~~~g~ev~vv~~~~~~~~~~~~----~~g~~~~~~~~~~~~-----~~~~~~~l~ 71 (357)
T PRK00726 1 MKKILLAGGGTGGHVFPALALAEELKKRGWEVLYLGTARGMEARLVP----KAGIEFHFIPSGGLR-----RKGSLANLK 71 (357)
T ss_pred CcEEEEEcCcchHhhhHHHHHHHHHHhCCCEEEEEECCCchhhhccc----cCCCcEEEEeccCcC-----CCChHHHHH
Confidence 47999999888899999999999999999999999986531 1222 347777777632111 111122222
Q ss_pred HHHHhCcHHHHHHHHHhcCCCCCccEEEeCCc--hhhHHHHHHHcCCccEEEecchHHHHHHHhhhhcCcccCCCCCCce
Q 012412 91 RFWQIGPQTLTELVEKMNGSDSPVDCIVYDSI--LLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNEI 168 (464)
Q Consensus 91 ~~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~--~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 168 (464)
..... ...+..+.+.+.+ .+| |+|++... ...+..+++..++|.+......
T Consensus 72 ~~~~~-~~~~~~~~~~ik~-~~p-Dvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~------------------------ 124 (357)
T PRK00726 72 APFKL-LKGVLQARKILKR-FKP-DVVVGFGGYVSGPGGLAARLLGIPLVIHEQNA------------------------ 124 (357)
T ss_pred HHHHH-HHHHHHHHHHHHh-cCC-CEEEECCCcchhHHHHHHHHcCCCEEEEcCCC------------------------
Confidence 11111 1122233222322 245 99999853 2445667888999987531110
Q ss_pred eCCCCCCCCCCCCCCccccCCCCchHHHHHHHHHhhhccCCcEEEecchhhhhHHHHHHHHhcCCeeeecccCCCccccc
Q 012412 169 LLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTWSLRTIGPTIPSFYLDK 248 (464)
Q Consensus 169 ~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~vgp~~~~~~~~~ 248 (464)
++ ....+++. ..++.+++.+...+. . ....++..+|+-+.....
T Consensus 125 -~~--------------------~~~~r~~~-------~~~d~ii~~~~~~~~----~--~~~~~i~vi~n~v~~~~~-- 168 (357)
T PRK00726 125 -VP--------------------GLANKLLA-------RFAKKVATAFPGAFP----E--FFKPKAVVTGNPVREEIL-- 168 (357)
T ss_pred -Cc--------------------cHHHHHHH-------HHhchheECchhhhh----c--cCCCCEEEECCCCChHhh--
Confidence 00 01122222 233444444322111 1 111246777644332110
Q ss_pred cccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhCCC--eEEEEEcCcccCcCChhh
Q 012412 249 QIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQ--HFLWVVRESEQAKLPKKF 326 (464)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~--~~i~~~~~~~~~~~~~~~ 326 (464)
.+.... .+ +...++.++|++..|+... ......+.++++++.. .+++.+|.... +++
T Consensus 169 -------------~~~~~~-~~-~~~~~~~~~i~~~gg~~~~--~~~~~~l~~a~~~~~~~~~~~~~~G~g~~----~~~ 227 (357)
T PRK00726 169 -------------ALAAPP-AR-LAGREGKPTLLVVGGSQGA--RVLNEAVPEALALLPEALQVIHQTGKGDL----EEV 227 (357)
T ss_pred -------------cccchh-hh-ccCCCCCeEEEEECCcHhH--HHHHHHHHHHHHHhhhCcEEEEEcCCCcH----HHH
Confidence 000000 11 1222344566665555421 1223333366555433 44556665433 222
Q ss_pred hhhccCCCcEEEEeccC-hHHhhccccccceeccCChhHHHHHHHhCCcEeccCC----ccchhhHHHHHHhHhcceeec
Q 012412 327 SDETLTSHKSLVVSWCP-QLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQ----WSDQSTNAKYILDVWKTGLKF 401 (464)
Q Consensus 327 ~~~~~~~~nv~~~~~~p-~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~----~~DQ~~na~rl~~~~G~g~~l 401 (464)
.+.....-++.+.+|+. ..++++.+|+ +|+|+|.++++||+++|+|+|++|. ..||..|+..+.+. |.|..+
T Consensus 228 ~~~~~~~~~v~~~g~~~~~~~~~~~~d~--~i~~~g~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~-~~g~~~ 304 (357)
T PRK00726 228 RAAYAAGINAEVVPFIDDMAAAYAAADL--VICRAGASTVAELAAAGLPAILVPLPHAADDHQTANARALVDA-GAALLI 304 (357)
T ss_pred HHHhhcCCcEEEeehHhhHHHHHHhCCE--EEECCCHHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHC-CCEEEE
Confidence 22211112388899994 4599999999 9999999999999999999999996 36899999999999 999999
Q ss_pred c--CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Q 012412 402 P--IVKRDAIADCISEILEGERGKELRRNAGKWRKL 435 (464)
Q Consensus 402 ~--~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~ 435 (464)
+ +++++.|.+++.++++|+ +.+++..+-+.+
T Consensus 305 ~~~~~~~~~l~~~i~~ll~~~---~~~~~~~~~~~~ 337 (357)
T PRK00726 305 PQSDLTPEKLAEKLLELLSDP---ERLEAMAEAARA 337 (357)
T ss_pred EcccCCHHHHHHHHHHHHcCH---HHHHHHHHHHHh
Confidence 7 668999999999999996 555544444333
|
|
| >cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Probab=99.85 E-value=5e-19 Score=171.85 Aligned_cols=315 Identities=17% Similarity=0.155 Sum_probs=184.5
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEccCCCCCCCCCCccCHHHHHHHHHH
Q 012412 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGYAQAESIEAYLERFWQ 94 (464)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 94 (464)
+|++...+..||....+.+++.|.++||+|++++......... ....++.++.++..-.. .......+..+..
T Consensus 1 ~~~~~~~~~gG~~~~~~~la~~l~~~G~ev~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 73 (350)
T cd03785 1 RILIAGGGTGGHIFPALALAEELRERGAEVLFLGTKRGLEARL--VPKAGIPLHTIPVGGLR-----RKGSLKKLKAPFK 73 (350)
T ss_pred CEEEEecCchhhhhHHHHHHHHHHhCCCEEEEEECCCcchhhc--ccccCCceEEEEecCcC-----CCChHHHHHHHHH
Confidence 5888888888999999999999999999999998754322111 11245777777632111 1111122222211
Q ss_pred hCcHHHHHHHHHhcCCCCCccEEEeCCc--hhhHHHHHHHcCCccEEEecchHHHHHHHhhhhcCcccCCCCCCceeCCC
Q 012412 95 IGPQTLTELVEKMNGSDSPVDCIVYDSI--LLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNEILLPG 172 (464)
Q Consensus 95 ~~~~~l~~~~~~l~~~~~p~DlVI~D~~--~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~p~ 172 (464)
. ...+..+.+.+. +.+| |+|+++.. ...+..+|...|+|++...... ++
T Consensus 74 ~-~~~~~~~~~~i~-~~~p-DvI~~~~~~~~~~~~~~a~~~~~p~v~~~~~~-------------------------~~- 124 (350)
T cd03785 74 L-LKGVLQARKILK-KFKP-DVVVGFGGYVSGPVGLAAKLLGIPLVIHEQNA-------------------------VP- 124 (350)
T ss_pred H-HHHHHHHHHHHH-hcCC-CEEEECCCCcchHHHHHHHHhCCCEEEEcCCC-------------------------Cc-
Confidence 1 111112222222 2245 99998643 3446778899999987631110 00
Q ss_pred CCCCCCCCCCCccccCCCCchHHHHHHHHHhhhccCCcEEEecchhhhhHHHHHHHHhcCCeeeecccCCCccccccccC
Q 012412 173 MPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTWSLRTIGPTIPSFYLDKQIED 252 (464)
Q Consensus 173 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~vgp~~~~~~~~~~~~~ 252 (464)
.....++. ...+.+++.+....+. .+ ..++..+|+-+....
T Consensus 125 -------------------~~~~~~~~-------~~~~~vi~~s~~~~~~-----~~-~~~~~~i~n~v~~~~------- 165 (350)
T cd03785 125 -------------------GLANRLLA-------RFADRVALSFPETAKY-----FP-KDKAVVTGNPVREEI------- 165 (350)
T ss_pred -------------------cHHHHHHH-------HhhCEEEEcchhhhhc-----CC-CCcEEEECCCCchHH-------
Confidence 00111111 3345666665432221 11 114566664332210
Q ss_pred cccccccccccchhHHHHHhhcCCCCceEEEEecccccCC-HHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhcc
Q 012412 253 DKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELK-AEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETL 331 (464)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~-~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 331 (464)
..+ ... ...+...+++++|++..|+..... .+.+..++..+.+.+..+++.+|....+.+.+.. +.
T Consensus 166 --------~~~-~~~-~~~~~~~~~~~~i~~~~g~~~~~~~~~~l~~a~~~l~~~~~~~~~i~G~g~~~~l~~~~-~~-- 232 (350)
T cd03785 166 --------LAL-DRE-RARLGLRPGKPTLLVFGGSQGARAINEAVPEALAELLRKRLQVIHQTGKGDLEEVKKAY-EE-- 232 (350)
T ss_pred --------hhh-hhh-HHhcCCCCCCeEEEEECCcHhHHHHHHHHHHHHHHhhccCeEEEEEcCCccHHHHHHHH-hc--
Confidence 000 011 222222234555666556553211 1222233333433344556666554222222111 11
Q ss_pred CCCcEEEEecc-ChHHhhccccccceeccCChhHHHHHHHhCCcEeccCC----ccchhhHHHHHHhHhcceeecc--Cc
Q 012412 332 TSHKSLVVSWC-PQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQ----WSDQSTNAKYILDVWKTGLKFP--IV 404 (464)
Q Consensus 332 ~~~nv~~~~~~-p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~----~~DQ~~na~rl~~~~G~g~~l~--~~ 404 (464)
..+|+.+.+|+ ...++|+.+|+ +|+++|.+|+.||+++|+|+|+.|. ..+|..|+..+.+. |+|..++ +.
T Consensus 233 ~~~~v~~~g~~~~~~~~l~~ad~--~v~~sg~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~~l~~~-g~g~~v~~~~~ 309 (350)
T cd03785 233 LGVNYEVFPFIDDMAAAYAAADL--VISRAGASTVAELAALGLPAILIPLPYAADDHQTANARALVKA-GAAVLIPQEEL 309 (350)
T ss_pred cCCCeEEeehhhhHHHHHHhcCE--EEECCCHhHHHHHHHhCCCEEEeecCCCCCCcHHHhHHHHHhC-CCEEEEecCCC
Confidence 23689999998 44589999999 9999999999999999999999885 46899999999999 9999988 46
Q ss_pred CHHHHHHHHHHHhcCC
Q 012412 405 KRDAIADCISEILEGE 420 (464)
Q Consensus 405 ~~~~l~~~i~~ll~~~ 420 (464)
+.++|.+++.++++|+
T Consensus 310 ~~~~l~~~i~~ll~~~ 325 (350)
T cd03785 310 TPERLAAALLELLSDP 325 (350)
T ss_pred CHHHHHHHHHHHhcCH
Confidence 9999999999999885
|
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.7e-17 Score=158.61 Aligned_cols=310 Identities=15% Similarity=0.108 Sum_probs=173.4
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEccCCCCCCCCCCccCHHHHHHHHH
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGYAQAESIEAYLERFW 93 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 93 (464)
|||+|+..+..||+.....|+++|.++||+|++++.+.....-. ....++.++.++..-. ........+....
T Consensus 1 ~~i~~~~g~~~g~~~~~~~La~~L~~~g~eV~vv~~~~~~~~~~--~~~~g~~~~~i~~~~~-----~~~~~~~~l~~~~ 73 (348)
T TIGR01133 1 KKVVLAAGGTGGHIFPALAVAEELIKRGVEVLWLGTKRGLEKRL--VPKAGIEFYFIPVGGL-----RRKGSFRLIKTPL 73 (348)
T ss_pred CeEEEEeCccHHHHhHHHHHHHHHHhCCCEEEEEeCCCcchhcc--cccCCCceEEEeccCc-----CCCChHHHHHHHH
Confidence 48999999999999988899999999999999998744221110 0135677777763211 1112222232222
Q ss_pred HhCcHHHHHHHHHhcCCCCCccEEEeCCch--hhHHHHHHHcCCccEEEecchHHHHHHHhhhhcCcccCCCCCCceeCC
Q 012412 94 QIGPQTLTELVEKMNGSDSPVDCIVYDSIL--LWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNEILLP 171 (464)
Q Consensus 94 ~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~--~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~p 171 (464)
.. ...+..+.+-+. +.+| |+|++.... ..+..+++..++|.+...... .
T Consensus 74 ~~-~~~~~~l~~~i~-~~~p-DvVi~~~~~~~~~~~~~~~~~~~p~v~~~~~~-------------------------~- 124 (348)
T TIGR01133 74 KL-LKAVFQARRILK-KFKP-DAVIGFGGYVSGPAGLAAKLLGIPLFHHEQNA-------------------------V- 124 (348)
T ss_pred HH-HHHHHHHHHHHH-hcCC-CEEEEcCCcccHHHHHHHHHcCCCEEEECCCC-------------------------C-
Confidence 11 112222222222 2245 999997543 335567888999987421100 0
Q ss_pred CCCCCCCCCCCCccccCCCCchHHHHHHHHHhhhccCCcEEEecchhhhhHHHHHHHHhcCCeeeecccCCCcccccccc
Q 012412 172 GMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTWSLRTIGPTIPSFYLDKQIE 251 (464)
Q Consensus 172 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~vgp~~~~~~~~~~~~ 251 (464)
.....+++. +..+.+++.+...-+. + ....||.-+.....
T Consensus 125 -------------------~~~~~~~~~-------~~~d~ii~~~~~~~~~-----~----~~~~i~n~v~~~~~----- 164 (348)
T TIGR01133 125 -------------------PGLTNKLLS-------RFAKKVLISFPGAKDH-----F----EAVLVGNPVRQEIR----- 164 (348)
T ss_pred -------------------ccHHHHHHH-------HHhCeeEECchhHhhc-----C----CceEEcCCcCHHHh-----
Confidence 011122222 3445666655332111 1 23445532221000
Q ss_pred CcccccccccccchhHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHh---hCCCeEEEEEcCcccCcCChhhhh
Q 012412 252 DDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLK---SSDQHFLWVVRESEQAKLPKKFSD 328 (464)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~---~~~~~~i~~~~~~~~~~~~~~~~~ 328 (464)
.+. .. ...+...+++++|.+..|+... ......+.++++ +.+.++++..++... +.+.+
T Consensus 165 ----------~~~-~~-~~~~~~~~~~~~i~~~gg~~~~--~~~~~~l~~a~~~l~~~~~~~~~~~g~~~~----~~l~~ 226 (348)
T TIGR01133 165 ----------SLP-VP-RERFGLREGKPTILVLGGSQGA--KILNELVPKALAKLAEKGIQIVHQTGKNDL----EKVKN 226 (348)
T ss_pred ----------ccc-ch-hhhcCCCCCCeEEEEECCchhH--HHHHHHHHHHHHHHhhcCcEEEEECCcchH----HHHHH
Confidence 000 00 1122222234444443344432 122222334443 334566655554322 22222
Q ss_pred hccCCCcEEEEecc--ChHHhhccccccceeccCChhHHHHHHHhCCcEeccCCc---cchhhHHHHHHhHhcceeecc-
Q 012412 329 ETLTSHKSLVVSWC--PQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQW---SDQSTNAKYILDVWKTGLKFP- 402 (464)
Q Consensus 329 ~~~~~~nv~~~~~~--p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~---~DQ~~na~rl~~~~G~g~~l~- 402 (464)
.....+-..++.|. ....+|+.+|+ +|+++|.+++.||+++|+|+|++|.. .+|..|+..+++. |.|..++
T Consensus 227 ~~~~~~l~~~v~~~~~~~~~~l~~ad~--~v~~~g~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~~-~~G~~~~~ 303 (348)
T TIGR01133 227 VYQELGIEAIVTFIDENMAAAYAAADL--VISRAGASTVAELAAAGVPAILIPYPYAADDQYYNAKFLEDL-GAGLVIRQ 303 (348)
T ss_pred HHhhCCceEEecCcccCHHHHHHhCCE--EEECCChhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHHC-CCEEEEec
Confidence 11111111223333 45699999999 99999988999999999999998863 4788899999999 9999887
Q ss_pred -CcCHHHHHHHHHHHhcCC
Q 012412 403 -IVKRDAIADCISEILEGE 420 (464)
Q Consensus 403 -~~~~~~l~~~i~~ll~~~ 420 (464)
+.++++|.+++.++++|+
T Consensus 304 ~~~~~~~l~~~i~~ll~~~ 322 (348)
T TIGR01133 304 KELLPEKLLEALLKLLLDP 322 (348)
T ss_pred ccCCHHHHHHHHHHHHcCH
Confidence 568999999999999886
|
RL J Bacteriol 1993 Mar;175(6):1841-3 |
| >COG4671 Predicted glycosyl transferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.2e-17 Score=146.79 Aligned_cols=339 Identities=15% Similarity=0.151 Sum_probs=201.0
Q ss_pred CCCCcEEEEEcCC--CccChHHHHHHHHHHHhC--CCeEEEEeCcccccccccCCCCCCceEEEccCCCCC-----CCCC
Q 012412 10 SCKLAHCLVLTYP--GQGHINPLLQFSRRLQHK--GIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDE-----GGYA 80 (464)
Q Consensus 10 ~~~~~~il~~~~~--~~GH~~p~l~la~~L~~r--Gh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-----~~~~ 80 (464)
.++++||+|++.. |-||+-+++.+|++|++. |.+|++++......... ...|+.|+.+|.-... ...+
T Consensus 6 ~~~~~Ri~~Yshd~~GlGHlrR~~~Ia~aLv~d~~~~~Il~IsG~~~~~~F~---~~~gVd~V~LPsl~k~~~G~~~~~d 82 (400)
T COG4671 6 ASKRPRILFYSHDLLGLGHLRRALRIAHALVEDYLGFDILIISGGPPAGGFP---GPAGVDFVKLPSLIKGDNGEYGLVD 82 (400)
T ss_pred hhccceEEEEehhhccchHHHHHHHHHHHHhhcccCceEEEEeCCCccCCCC---CcccCceEecCceEecCCCceeeee
Confidence 3456799987776 459999999999999998 99999999987766666 3589999999842211 0122
Q ss_pred CccCHHHHHHHHHHhCcHHHHHHHHHhcCCCCCccEEEeCCchhhHHHHHHHcCCccEEEecchHHHHHHHhhhhcCccc
Q 012412 81 QAESIEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLE 160 (464)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~ 160 (464)
...+..++.+ + -++++-.-.+..+| |++|+|.+-. |. .-+. .|.+- ++.....
T Consensus 83 ~~~~l~e~~~-~-------Rs~lil~t~~~fkP-Di~IVd~~P~-Gl-r~EL--~ptL~-------------yl~~~~t- 135 (400)
T COG4671 83 LDGDLEETKK-L-------RSQLILSTAETFKP-DIFIVDKFPF-GL-RFEL--LPTLE-------------YLKTTGT- 135 (400)
T ss_pred cCCCHHHHHH-H-------HHHHHHHHHHhcCC-CEEEEecccc-ch-hhhh--hHHHH-------------HHhhcCC-
Confidence 2233333222 1 12333333344477 9999995543 41 1110 11110 0000000
Q ss_pred CCCCCCceeCCCCCCCCCCCCCCccccCCCCchHHHHHHHHHhhhccCCcEEEecchhhhhHHHHHH--HHhcC-Ceeee
Q 012412 161 LPLTGNEILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEW--LRKTW-SLRTI 237 (464)
Q Consensus 161 ~p~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~--~~~~~-~~~~v 237 (464)
..+-++ -...|.+....+..........+. + -.|.+++...+.+....-.+ .+... .+.++
T Consensus 136 -------~~vL~l--r~i~D~p~~~~~~w~~~~~~~~I~-r------~yD~V~v~GdP~f~d~~~~~~~~~~i~~k~~yt 199 (400)
T COG4671 136 -------RLVLGL--RSIRDIPQELEADWRRAETVRLIN-R------FYDLVLVYGDPDFYDPLTEFPFAPAIRAKMRYT 199 (400)
T ss_pred -------cceeeh--HhhhhchhhhccchhhhHHHHHHH-H------hheEEEEecCccccChhhcCCccHhhhhheeEe
Confidence 000011 011111111111000111112222 1 22466677766554322111 11111 47788
Q ss_pred cccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhh---CCCeEEEEE
Q 012412 238 GPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKS---SDQHFLWVV 314 (464)
Q Consensus 238 gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~---~~~~~i~~~ 314 (464)
|-+ ..- +|.... |. ... +.+-.|+||.|... ...+++...++|-.. +....++++
T Consensus 200 G~v-q~~-----~~~~~~-------p~-------~~~-pE~~~Ilvs~GGG~-dG~eLi~~~l~A~~~l~~l~~~~~ivt 257 (400)
T COG4671 200 GFV-QRS-----LPHLPL-------PP-------HEA-PEGFDILVSVGGGA-DGAELIETALAAAQLLAGLNHKWLIVT 257 (400)
T ss_pred EEe-ecc-----CcCCCC-------CC-------cCC-CccceEEEecCCCh-hhHHHHHHHHHHhhhCCCCCcceEEEe
Confidence 865 220 111110 00 000 33446899888764 356777777776544 223366666
Q ss_pred cCcccCcCChhhhhhccCCCcEEEEeccChH-HhhccccccceeccCChhHHHHHHHhCCcEeccCCcc---chhhHHHH
Q 012412 315 RESEQAKLPKKFSDETLTSHKSLVVSWCPQL-EVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWS---DQSTNAKY 390 (464)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~-~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~---DQ~~na~r 390 (464)
|+...+.....+.+.+..-+++.+..|-.+. .++..++. +|+-||+||++|-|++|||.+++|... ||...|+|
T Consensus 258 GP~MP~~~r~~l~~~A~~~p~i~I~~f~~~~~~ll~gA~~--vVSm~GYNTvCeILs~~k~aLivPr~~p~eEQliRA~R 335 (400)
T COG4671 258 GPFMPEAQRQKLLASAPKRPHISIFEFRNDFESLLAGARL--VVSMGGYNTVCEILSFGKPALIVPRAAPREEQLIRAQR 335 (400)
T ss_pred CCCCCHHHHHHHHHhcccCCCeEEEEhhhhHHHHHHhhhe--eeecccchhhhHHHhCCCceEEeccCCCcHHHHHHHHH
Confidence 6643333333444442234899999998766 99999999 999999999999999999999999864 99999999
Q ss_pred HHhHhcceeecc--CcCHHHHHHHHHHHhcC
Q 012412 391 ILDVWKTGLKFP--IVKRDAIADCISEILEG 419 (464)
Q Consensus 391 l~~~~G~g~~l~--~~~~~~l~~~i~~ll~~ 419 (464)
++++ |+.-++. ++++..|+++|...+.-
T Consensus 336 l~~L-GL~dvL~pe~lt~~~La~al~~~l~~ 365 (400)
T COG4671 336 LEEL-GLVDVLLPENLTPQNLADALKAALAR 365 (400)
T ss_pred HHhc-CcceeeCcccCChHHHHHHHHhcccC
Confidence 9999 9998887 99999999999999973
|
|
| >TIGR00215 lpxB lipid-A-disaccharide synthase | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.1e-16 Score=156.23 Aligned_cols=348 Identities=12% Similarity=0.048 Sum_probs=192.3
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEccCCCCCCCCCCccCHHHHHHHHH
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGYAQAESIEAYLERFW 93 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 93 (464)
.||++...++.||+.|. +|+++|.++|++|.|++.... .+++......+.+..++ ...+.+.++.+.
T Consensus 6 ~ki~i~aGgtsGhi~pa-al~~~l~~~~~~~~~~g~gg~--~m~~~g~~~~~~~~~l~----------v~G~~~~l~~~~ 72 (385)
T TIGR00215 6 PTIALVAGEASGDILGA-GLRQQLKEHYPNARFIGVAGP--RMAAEGCEVLYSMEELS----------VMGLREVLGRLG 72 (385)
T ss_pred CeEEEEeCCccHHHHHH-HHHHHHHhcCCCcEEEEEccH--HHHhCcCccccChHHhh----------hccHHHHHHHHH
Confidence 47888999999999999 999999999999999987532 22200001122222222 111112222222
Q ss_pred HhCcHHHHHHHHHhcCCCCCccEEEeCCch-hh--HHHHHHHcCCccEEEec-chHHHHHHHhhhhcCcccCCCCCCcee
Q 012412 94 QIGPQTLTELVEKMNGSDSPVDCIVYDSIL-LW--ALDVAKKFGLLGAPFLT-QSCAVDYIYYHVKKGSLELPLTGNEIL 169 (464)
Q Consensus 94 ~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~-~~--~~~~A~~~giP~v~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~~ 169 (464)
.. ...+....+.+.+ .+| |+||.-... .. ...+|+.+|||++++.+ +.+.
T Consensus 73 ~~-~~~~~~~~~~l~~-~kP-d~vi~~g~~~~~~~~a~aa~~~gip~v~~i~P~~wa----------------------- 126 (385)
T TIGR00215 73 RL-LKIRKEVVQLAKQ-AKP-DLLVGIDAPDFNLTKELKKKDPGIKIIYYISPQVWA----------------------- 126 (385)
T ss_pred HH-HHHHHHHHHHHHh-cCC-CEEEEeCCCCccHHHHHHHhhCCCCEEEEeCCcHhh-----------------------
Confidence 21 1122233333333 256 999984432 22 33488999999987532 1100
Q ss_pred CCCCCCCCCCCCCCccccCCCCchHHHHHHHHHhhhccCCcEEEecchhhhhHHHHHHHHh-cCCeeeecccCCCccccc
Q 012412 170 LPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRK-TWSLRTIGPTIPSFYLDK 248 (464)
Q Consensus 170 ~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~-~~~~~~vgp~~~~~~~~~ 248 (464)
+. ....+.+. ...+.+++.+..+.+. +.. ..+..++|.-..+..
T Consensus 127 ------w~--------------~~~~r~l~-------~~~d~v~~~~~~e~~~-----~~~~g~~~~~vGnPv~~~~--- 171 (385)
T TIGR00215 127 ------WR--------------KWRAKKIE-------KATDFLLAILPFEKAF-----YQKKNVPCRFVGHPLLDAI--- 171 (385)
T ss_pred ------cC--------------cchHHHHH-------HHHhHhhccCCCcHHH-----HHhcCCCEEEECCchhhhc---
Confidence 00 00122222 2223334433322221 222 125667884433211
Q ss_pred cccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhC-----CCeEEEEEcCcccCcCC
Q 012412 249 QIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSS-----DQHFLWVVRESEQAKLP 323 (464)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~~~~ 323 (464)
+. ..+...+..+.++..+++++|.+..||....-......++++++.+ +.++++..........-
T Consensus 172 --~~--------~~~~~~~~r~~lgl~~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~~vi~~~~~~~~~~~ 241 (385)
T TIGR00215 172 --PL--------YKPDRKSAREKLGIDHNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLRRVLPVVNFKRRLQF 241 (385)
T ss_pred --cc--------cCCCHHHHHHHcCCCCCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeEEEEEeCCchhHHHH
Confidence 00 0011233333333334667888888877532133445555554432 34555544332111111
Q ss_pred hhhhhhccCCCcEEEEeccChHHhhccccccceeccCChhHHHHHHHhCCcEecc----CCcc---------chhhHHHH
Q 012412 324 KKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAM----PQWS---------DQSTNAKY 390 (464)
Q Consensus 324 ~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~----P~~~---------DQ~~na~r 390 (464)
+++.+.......+.+..+ ....+++.+|+ +|+-+|..|+ |++++|+|+|++ |+.. .|..|++.
T Consensus 242 ~~~~~~~~~~~~v~~~~~-~~~~~l~aADl--~V~~SGt~tl-Ea~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~ni 317 (385)
T TIGR00215 242 EQIKAEYGPDLQLHLIDG-DARKAMFAADA--ALLASGTAAL-EAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNI 317 (385)
T ss_pred HHHHHHhCCCCcEEEECc-hHHHHHHhCCE--EeecCCHHHH-HHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHH
Confidence 222222112234444332 23479999999 9999999988 999999999998 7643 38889999
Q ss_pred HHhHhcceeecc--CcCHHHHHHHHHHHhcCC----c-hHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHH
Q 012412 391 ILDVWKTGLKFP--IVKRDAIADCISEILEGE----R-GKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFV 454 (464)
Q Consensus 391 l~~~~G~g~~l~--~~~~~~l~~~i~~ll~~~----~-~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~ 454 (464)
+.+. ++...+. +++++.|.+.+.++|.|+ + .+.+++..+++.+.+. ++|.+.+..+.++
T Consensus 318 l~~~-~~~pel~q~~~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~a~~i~ 383 (385)
T TIGR00215 318 LANR-LLVPELLQEECTPHPLAIALLLLLENGLKAYKEMHRERQFFEELRQRIY----CNADSERAAQAVL 383 (385)
T ss_pred hcCC-ccchhhcCCCCCHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHhc----CCCHHHHHHHHHh
Confidence 9999 9988876 899999999999999886 3 2455555555555553 3455555554444
|
Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA |
| >TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG | Back alignment and domain information |
|---|
Probab=99.75 E-value=8.8e-17 Score=149.65 Aligned_cols=106 Identities=17% Similarity=0.166 Sum_probs=81.1
Q ss_pred CceEEEEecccccCCHHHHHHHHHHHhhC--CCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChH-Hhhcccccc
Q 012412 278 ESVVYVSYGSFVELKAEEMEELAWGLKSS--DQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQL-EVLAHEATG 354 (464)
Q Consensus 278 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~-~ll~~~~~~ 354 (464)
.+.|++++|..-. ......+++++++. +.++.+++|... +..+++.+.....+|+.+..+++++ ++|+.+|+
T Consensus 170 ~~~iLi~~GG~d~--~~~~~~~l~~l~~~~~~~~i~vv~G~~~--~~~~~l~~~~~~~~~i~~~~~~~~m~~lm~~aDl- 244 (279)
T TIGR03590 170 LRRVLVSFGGADP--DNLTLKLLSALAESQINISITLVTGSSN--PNLDELKKFAKEYPNIILFIDVENMAELMNEADL- 244 (279)
T ss_pred cCeEEEEeCCcCC--cCHHHHHHHHHhccccCceEEEEECCCC--cCHHHHHHHHHhCCCEEEEeCHHHHHHHHHHCCE-
Confidence 3579999996543 22445666776654 457778777653 2233443332245689999999987 99999999
Q ss_pred ceeccCChhHHHHHHHhCCcEeccCCccchhhHHHH
Q 012412 355 CFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKY 390 (464)
Q Consensus 355 ~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~r 390 (464)
+|++|| +|++|++++|+|+|++|...+|..||+.
T Consensus 245 -~Is~~G-~T~~E~~a~g~P~i~i~~~~nQ~~~a~~ 278 (279)
T TIGR03590 245 -AIGAAG-STSWERCCLGLPSLAICLAENQQSNSQQ 278 (279)
T ss_pred -EEECCc-hHHHHHHHcCCCEEEEEecccHHHHhhh
Confidence 999999 9999999999999999999999999975
|
This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases. |
| >PRK13609 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=3.5e-16 Score=153.48 Aligned_cols=136 Identities=18% Similarity=0.268 Sum_probs=100.5
Q ss_pred CCCceEEEEecccccCCHHHHHHHHHHHhhC-CCeEEEEEcCcccCcCChhhhhhcc-CCCcEEEEeccChH-Hhhcccc
Q 012412 276 AKESVVYVSYGSFVELKAEEMEELAWGLKSS-DQHFLWVVRESEQAKLPKKFSDETL-TSHKSLVVSWCPQL-EVLAHEA 352 (464)
Q Consensus 276 ~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~~~~~-~~~nv~~~~~~p~~-~ll~~~~ 352 (464)
+++++|++..|+... .+.+..+++++.+. +.+++++.+.+. .+.+.+.+... .++|+.+.+|+++. +++..+|
T Consensus 200 ~~~~~il~~~G~~~~--~k~~~~li~~l~~~~~~~~viv~G~~~--~~~~~l~~~~~~~~~~v~~~g~~~~~~~l~~~aD 275 (380)
T PRK13609 200 PNKKILLIMAGAHGV--LGNVKELCQSLMSVPDLQVVVVCGKNE--ALKQSLEDLQETNPDALKVFGYVENIDELFRVTS 275 (380)
T ss_pred CCCcEEEEEcCCCCC--CcCHHHHHHHHhhCCCcEEEEEeCCCH--HHHHHHHHHHhcCCCcEEEEechhhHHHHHHhcc
Confidence 356678887787653 12345566666554 467776665431 11222222110 34689999999875 8999999
Q ss_pred ccceeccCChhHHHHHHHhCCcEecc-CCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcCC
Q 012412 353 TGCFVTHCGWNSTMEALSLGVPMVAM-PQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGE 420 (464)
Q Consensus 353 ~~~vI~HgG~~s~~eal~~GvP~v~~-P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~~ 420 (464)
+ +|+.+|..|+.||+++|+|+|+. |..+.+..|+..+++. |+|+.. .+.++|.++|.++++|+
T Consensus 276 ~--~v~~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~~-G~~~~~--~~~~~l~~~i~~ll~~~ 339 (380)
T PRK13609 276 C--MITKPGGITLSEAAALGVPVILYKPVPGQEKENAMYFERK-GAAVVI--RDDEEVFAKTEALLQDD 339 (380)
T ss_pred E--EEeCCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHhC-CcEEEE--CCHHHHHHHHHHHHCCH
Confidence 9 99999988999999999999984 6777788999999999 998865 47899999999999986
|
|
| >PRK13608 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=4.6e-15 Score=145.63 Aligned_cols=136 Identities=15% Similarity=0.291 Sum_probs=101.5
Q ss_pred CCCceEEEEecccccCCHHHHHHHHHHH-hh-CCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChH-Hhhcccc
Q 012412 276 AKESVVYVSYGSFVELKAEEMEELAWGL-KS-SDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQL-EVLAHEA 352 (464)
Q Consensus 276 ~~~~~v~vs~Gs~~~~~~~~~~~~~~al-~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~-~ll~~~~ 352 (464)
+++++|++..|+... ...+..+++++ +. .+.++++++|+.. .+.+.+.+.....+++.+.+|+.+. +++..+|
T Consensus 200 ~~~~~ilv~~G~lg~--~k~~~~li~~~~~~~~~~~~vvv~G~~~--~l~~~l~~~~~~~~~v~~~G~~~~~~~~~~~aD 275 (391)
T PRK13608 200 PDKQTILMSAGAFGV--SKGFDTMITDILAKSANAQVVMICGKSK--ELKRSLTAKFKSNENVLILGYTKHMNEWMASSQ 275 (391)
T ss_pred CCCCEEEEECCCccc--chhHHHHHHHHHhcCCCceEEEEcCCCH--HHHHHHHHHhccCCCeEEEeccchHHHHHHhhh
Confidence 456788888888762 23444455553 33 2457766665431 1223333222134689999999766 8999999
Q ss_pred ccceeccCChhHHHHHHHhCCcEecc-CCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcCC
Q 012412 353 TGCFVTHCGWNSTMEALSLGVPMVAM-PQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGE 420 (464)
Q Consensus 353 ~~~vI~HgG~~s~~eal~~GvP~v~~-P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~~ 420 (464)
+ +|+.+|..|+.||+++|+|+|++ |..++|..|+..+++. |+|+... +.+++.++|.++++|+
T Consensus 276 l--~I~k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~-G~g~~~~--~~~~l~~~i~~ll~~~ 339 (391)
T PRK13608 276 L--MITKPGGITISEGLARCIPMIFLNPAPGQELENALYFEEK-GFGKIAD--TPEEAIKIVASLTNGN 339 (391)
T ss_pred E--EEeCCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhC-CcEEEeC--CHHHHHHHHHHHhcCH
Confidence 9 99998888999999999999997 7777788999999999 9998764 7899999999999885
|
|
| >PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.4e-14 Score=142.27 Aligned_cols=316 Identities=12% Similarity=0.082 Sum_probs=158.2
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEccCCCCCCCCCCccCHHHHHHHH
Q 012412 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGYAQAESIEAYLERF 92 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 92 (464)
+|||+|...+..||+.|.+ ++++|.++++++.+++.... ...+.....++.++.++- ..+.+.+..+
T Consensus 1 ~~ki~i~~Ggt~G~i~~a~-l~~~L~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~----------~g~~~~~~~~ 67 (380)
T PRK00025 1 PLRIAIVAGEVSGDLLGAG-LIRALKARAPNLEFVGVGGP--RMQAAGCESLFDMEELAV----------MGLVEVLPRL 67 (380)
T ss_pred CceEEEEecCcCHHHHHHH-HHHHHHhcCCCcEEEEEccH--HHHhCCCccccCHHHhhh----------ccHHHHHHHH
Confidence 4699999999999999999 99999998887777764331 122000012222222221 0111222222
Q ss_pred HHhCcHHHHHHHHHhcCCCCCccEEEeCCch-hhH--HHHHHHcCCccEEEecchHHHHHHHhhhhcCcccCCCCCCcee
Q 012412 93 WQIGPQTLTELVEKMNGSDSPVDCIVYDSIL-LWA--LDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNEIL 169 (464)
Q Consensus 93 ~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~-~~~--~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 169 (464)
... ...+..+.+.+. +.+| |+|++-... .+. ..+|...|||++.+.+..
T Consensus 68 ~~~-~~~~~~~~~~l~-~~kP-divi~~~~~~~~~~~a~~a~~~~ip~i~~~~~~------------------------- 119 (380)
T PRK00025 68 PRL-LKIRRRLKRRLL-AEPP-DVFIGIDAPDFNLRLEKKLRKAGIPTIHYVSPS------------------------- 119 (380)
T ss_pred HHH-HHHHHHHHHHHH-HcCC-CEEEEeCCCCCCHHHHHHHHHCCCCEEEEeCCc-------------------------
Confidence 111 111222222222 2356 999874332 233 334778899988652211
Q ss_pred CCCCCCCCCCCCCCccccCCCCchHHHHHHHHHhhhccCCcEEEecchhhhhHHHHHHHHhc-CCeeeecccCCCccccc
Q 012412 170 LPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKT-WSLRTIGPTIPSFYLDK 248 (464)
Q Consensus 170 ~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~-~~~~~vgp~~~~~~~~~ 248 (464)
.+. + .......+. ...+.+++.+....+. +... .++.++|....+..
T Consensus 120 -------~~~--------~--~~~~~~~~~-------~~~d~i~~~~~~~~~~-----~~~~g~~~~~~G~p~~~~~--- 167 (380)
T PRK00025 120 -------VWA--------W--RQGRAFKIA-------KATDHVLALFPFEAAF-----YDKLGVPVTFVGHPLADAI--- 167 (380)
T ss_pred -------hhh--------c--CchHHHHHH-------HHHhhheeCCccCHHH-----HHhcCCCeEEECcCHHHhc---
Confidence 000 0 000111111 2234445554332221 2211 13566663222210
Q ss_pred cccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhC-----CCeEEEEEcCcccCcCC
Q 012412 249 QIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSS-----DQHFLWVVRESEQAKLP 323 (464)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~~~~ 323 (464)
. ..+........+...+++++|++..||...........++++++.+ +.+++++.+... ..
T Consensus 168 --~---------~~~~~~~~~~~l~~~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~~ii~~~~~~---~~ 233 (380)
T PRK00025 168 --P---------LLPDRAAARARLGLDPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLRFVLPLVNPK---RR 233 (380)
T ss_pred --c---------cccChHHHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCChh---hH
Confidence 0 0011233333333323456667767765422112334445544322 346666654221 11
Q ss_pred hhhhhhcc-C-CCcEEEEeccChHHhhccccccceeccCChhHHHHHHHhCCcEeccCCcc--------chhhH-----H
Q 012412 324 KKFSDETL-T-SHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWS--------DQSTN-----A 388 (464)
Q Consensus 324 ~~~~~~~~-~-~~nv~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~--------DQ~~n-----a 388 (464)
+.+.+... . .-++.+.+. .-..+++.+|+ +|+.+|.+++ ||+++|+|+|+.|... .|..| +
T Consensus 234 ~~~~~~~~~~~~~~v~~~~~-~~~~~~~~aDl--~v~~sG~~~l-Ea~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~ 309 (380)
T PRK00025 234 EQIEEALAEYAGLEVTLLDG-QKREAMAAADA--ALAASGTVTL-ELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLP 309 (380)
T ss_pred HHHHHHHhhcCCCCeEEEcc-cHHHHHHhCCE--EEECccHHHH-HHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehH
Confidence 22222110 1 123444321 23489999999 9999999888 9999999999985321 22222 2
Q ss_pred HHHHhHhcceeecc--CcCHHHHHHHHHHHhcCC
Q 012412 389 KYILDVWKTGLKFP--IVKRDAIADCISEILEGE 420 (464)
Q Consensus 389 ~rl~~~~G~g~~l~--~~~~~~l~~~i~~ll~~~ 420 (464)
+.+.+. +++..+. ..+++.|.+++.++++|+
T Consensus 310 ~~~~~~-~~~~~~~~~~~~~~~l~~~i~~ll~~~ 342 (380)
T PRK00025 310 NLLAGR-ELVPELLQEEATPEKLARALLPLLADG 342 (380)
T ss_pred HHhcCC-CcchhhcCCCCCHHHHHHHHHHHhcCH
Confidence 334444 4343333 789999999999999997
|
|
| >PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.60 E-value=7.7e-17 Score=138.83 Aligned_cols=135 Identities=19% Similarity=0.255 Sum_probs=98.1
Q ss_pred eEEEEecccccCC-HHHHHHHHHHHhh--CCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccC-hHHhhccccccc
Q 012412 280 VVYVSYGSFVELK-AEEMEELAWGLKS--SDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCP-QLEVLAHEATGC 355 (464)
Q Consensus 280 ~v~vs~Gs~~~~~-~~~~~~~~~al~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p-~~~ll~~~~~~~ 355 (464)
+|+|+.||..... .+.+..+...+.. ...++++++|..........+.+ ...|+.+.+|++ ..+++..+|+
T Consensus 1 tilv~gGs~g~~~l~~~v~~~~~~~~~~~~~~~viv~~G~~~~~~~~~~~~~---~~~~v~~~~~~~~m~~~m~~aDl-- 75 (167)
T PF04101_consen 1 TILVTGGSQGARDLNRLVLKILELLAEKHKNIQVIVQTGKNNYEELKIKVEN---FNPNVKVFGFVDNMAELMAAADL-- 75 (167)
T ss_dssp -EEEEETTTSHHHHHCCCCCHHHHHHHHHHHCCCCCCCTTCECHHHCCCHCC---TTCCCEEECSSSSHHHHHHHHSE--
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHhhcCCCcEEEEEECCCcHHHHHHHHhc---cCCcEEEEechhhHHHHHHHcCE--
Confidence 5899999876310 1111122222222 24688888887644333333221 237899999999 6699999999
Q ss_pred eeccCChhHHHHHHHhCCcEeccCCcc----chhhHHHHHHhHhcceeecc--CcCHHHHHHHHHHHhcCC
Q 012412 356 FVTHCGWNSTMEALSLGVPMVAMPQWS----DQSTNAKYILDVWKTGLKFP--IVKRDAIADCISEILEGE 420 (464)
Q Consensus 356 vI~HgG~~s~~eal~~GvP~v~~P~~~----DQ~~na~rl~~~~G~g~~l~--~~~~~~l~~~i~~ll~~~ 420 (464)
+|||||.||++|++++|+|+|++|... +|..||..+++. |+|..+. ..+.+.|.+.|.+++.++
T Consensus 76 vIs~aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~-g~~~~~~~~~~~~~~L~~~i~~l~~~~ 145 (167)
T PF04101_consen 76 VISHAGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKK-GAAIMLDESELNPEELAEAIEELLSDP 145 (167)
T ss_dssp EEECS-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHC-CCCCCSECCC-SCCCHHHHHHCHCCCH
T ss_pred EEeCCCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHc-CCccccCcccCCHHHHHHHHHHHHcCc
Confidence 999999999999999999999999988 999999999999 9999998 777999999999999986
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B. |
| >TIGR03492 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=99.60 E-value=7.8e-13 Score=129.26 Aligned_cols=326 Identities=16% Similarity=0.097 Sum_probs=181.0
Q ss_pred CCccChHHHHHHHHHHHh--CCCeEE---EEeCcccccccccCCCCCCceEEEccCCCCCCCCCCccCHHHHHHHHHH-h
Q 012412 22 PGQGHINPLLQFSRRLQH--KGIKVT---LVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGYAQAESIEAYLERFWQ-I 95 (464)
Q Consensus 22 ~~~GH~~p~l~la~~L~~--rGh~V~---~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~ 95 (464)
.|+|-=.=.++||++|.+ .|++|. |++.....+.-. ....| .+..+|.+ ++.. ......++.... .
T Consensus 5 nghged~~a~ai~~~l~~~~~~~~v~~~p~vG~~~~~e~~~--ip~~g-~~~~~~sg----g~~~-~~~~~~~~~~~~gl 76 (396)
T TIGR03492 5 NGHGEDLIAARIAKALLQLSPDLNLEALPLVGEGRAYQNLG--IPIIG-PTKELPSG----GFSY-QSLRGLLRDLRAGL 76 (396)
T ss_pred CCchHHHHHHHHHHHHHhhCCCCCeEEeCcccCCHHHhhCC--CceeC-CCCCCCCC----CccC-CCHHHHHHHHHhhH
Confidence 345555677889999998 699999 999876544222 11233 44455432 2322 233344433333 1
Q ss_pred CcH--HHHHHHHHhcCCCCCccEEEeCCchhhHHHHHHHcCCccEEEecchHHHHHHHhhhhcCcccCCCCCCceeCCCC
Q 012412 96 GPQ--TLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNEILLPGM 173 (464)
Q Consensus 96 ~~~--~l~~~~~~l~~~~~p~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~p~~ 173 (464)
... ....+++++.. +| |+||+-.-+. +..+|...|+|++++.+.-... .+.+...
T Consensus 77 ~~~~~~~~~~~~~~~~--~p-~~v~~~Gg~v-~~~aA~~~~~p~~~~~~~esn~------~~~~~~~------------- 133 (396)
T TIGR03492 77 VGLTLGQWRALRKWAK--KG-DLIVAVGDIV-PLLFAWLSGKPYAFVGTAKSDY------YWESGPR------------- 133 (396)
T ss_pred HHHHHHHHHHHHHHhh--cC-CEEEEECcHH-HHHHHHHcCCCceEEEeeccce------eecCCCC-------------
Confidence 111 12233444422 44 9999876665 8889999999999854432000 1111110
Q ss_pred CCCCCCCCCCccccCCC--CchHHHHHHHHHhhhccCCcEEEecchhhhhHHHHHHHHhc-CCeeeecccCCCccccccc
Q 012412 174 PPLEPQDMPSFIHDLGS--YPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKT-WSLRTIGPTIPSFYLDKQI 250 (464)
Q Consensus 174 p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~-~~~~~vgp~~~~~~~~~~~ 250 (464)
. ....++.++.. +..|..+.+ ..+.++.+++.... ..+.+... .++.++|-.+.+....
T Consensus 134 --~---~~~~~~~~~~G~~~~p~e~n~l-----~~~~a~~v~~~~~~-----t~~~l~~~g~k~~~vGnPv~d~l~~--- 195 (396)
T TIGR03492 134 --R---SPSDEYHRLEGSLYLPWERWLM-----RSRRCLAVFVRDRL-----TARDLRRQGVRASYLGNPMMDGLEP--- 195 (396)
T ss_pred --C---ccchhhhccCCCccCHHHHHHh-----hchhhCEEeCCCHH-----HHHHHHHCCCeEEEeCcCHHhcCcc---
Confidence 0 11111111110 011111111 22445555555532 22233332 3688999444332110
Q ss_pred cCcccccccccccchhHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhC----CCeEEEEEcCcc-cCcCChh
Q 012412 251 EDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSS----DQHFLWVVRESE-QAKLPKK 325 (464)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~----~~~~i~~~~~~~-~~~~~~~ 325 (464)
. ... -+ .+++++|.+--||-...-...+..++++++.+ +.+|++.+.+.. .+.+.+.
T Consensus 196 ------------~-~~~---~l--~~~~~~lllLpGSR~ae~~~~lp~~l~al~~L~~~~~~~~v~~~~~~~~~~~~~~~ 257 (396)
T TIGR03492 196 ------------P-ERK---PL--LTGRFRIALLPGSRPPEAYRNLKLLLRALEALPDSQPFVFLAAIVPSLSLEKLQAI 257 (396)
T ss_pred ------------c-ccc---cc--CCCCCEEEEECCCCHHHHHccHHHHHHHHHHHhhCCCeEEEEEeCCCCCHHHHHHH
Confidence 0 000 11 13456888888887532223344555555443 567888874432 1111111
Q ss_pred hhhhccC--------------CCcEEEEeccChH-HhhccccccceeccCChhHHHHHHHhCCcEeccCCccchhhHHHH
Q 012412 326 FSDETLT--------------SHKSLVVSWCPQL-EVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKY 390 (464)
Q Consensus 326 ~~~~~~~--------------~~nv~~~~~~p~~-~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~r 390 (464)
+.+. .. .+++.+..+..+. ++++.+|+ +|+-+|..| .|++++|+|+|++|....|. |+..
T Consensus 258 l~~~-g~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~ADl--vI~rSGt~T-~E~a~lg~P~Ilip~~~~q~-na~~ 332 (396)
T TIGR03492 258 LEDL-GWQLEGSSEDQTSLFQKGTLEVLLGRGAFAEILHWADL--GIAMAGTAT-EQAVGLGKPVIQLPGKGPQF-TYGF 332 (396)
T ss_pred HHhc-CceecCCccccchhhccCceEEEechHhHHHHHHhCCE--EEECcCHHH-HHHHHhCCCEEEEeCCCCHH-HHHH
Confidence 1100 01 1236666665444 89999999 999999877 99999999999999877787 9887
Q ss_pred HHh----HhcceeeccCcCHHHHHHHHHHHhcCC
Q 012412 391 ILD----VWKTGLKFPIVKRDAIADCISEILEGE 420 (464)
Q Consensus 391 l~~----~~G~g~~l~~~~~~~l~~~i~~ll~~~ 420 (464)
+++ . |.+..+.+.+.+.|.+++.+++.|+
T Consensus 333 ~~~~~~l~-g~~~~l~~~~~~~l~~~l~~ll~d~ 365 (396)
T TIGR03492 333 AEAQSRLL-GGSVFLASKNPEQAAQVVRQLLADP 365 (396)
T ss_pred HHhhHhhc-CCEEecCCCCHHHHHHHHHHHHcCH
Confidence 776 3 5566666666799999999999986
|
This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown. |
| >PLN02605 monogalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.59 E-value=4.5e-13 Score=131.32 Aligned_cols=146 Identities=18% Similarity=0.139 Sum_probs=100.1
Q ss_pred hHHHHHhhcCCCCceEEEEecccccCC-HHHHHHHHHHHh-----hCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEE
Q 012412 266 EACMKWLNDRAKESVVYVSYGSFVELK-AEEMEELAWGLK-----SSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVV 339 (464)
Q Consensus 266 ~~~~~~l~~~~~~~~v~vs~Gs~~~~~-~~~~~~~~~al~-----~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~ 339 (464)
+++.+-++-.+++++|++..|+..... ...+..+...+. ..+.++++.+|.+. .+.+.+.+. ....++++.
T Consensus 194 ~~~r~~~gl~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~--~~~~~L~~~-~~~~~v~~~ 270 (382)
T PLN02605 194 DELRRELGMDEDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQVVVICGRNK--KLQSKLESR-DWKIPVKVR 270 (382)
T ss_pred HHHHHHcCCCCCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCceEEEEECCCH--HHHHHHHhh-cccCCeEEE
Confidence 344444444345667777666554322 223333332221 23456667776541 122222221 123578999
Q ss_pred eccChH-HhhccccccceeccCChhHHHHHHHhCCcEeccCCccch-hhHHHHHHhHhcceeeccCcCHHHHHHHHHHHh
Q 012412 340 SWCPQL-EVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQ-STNAKYILDVWKTGLKFPIVKRDAIADCISEIL 417 (464)
Q Consensus 340 ~~~p~~-~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ-~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll 417 (464)
+|+++. +++..+|+ +|+.+|.+|+.||+++|+|+|+.+....| ..|+..+.+. |.|... .++++|.++|.+++
T Consensus 271 G~~~~~~~l~~aaDv--~V~~~g~~ti~EAma~g~PvI~~~~~pgqe~gn~~~i~~~-g~g~~~--~~~~~la~~i~~ll 345 (382)
T PLN02605 271 GFVTNMEEWMGACDC--IITKAGPGTIAEALIRGLPIILNGYIPGQEEGNVPYVVDN-GFGAFS--ESPKEIARIVAEWF 345 (382)
T ss_pred eccccHHHHHHhCCE--EEECCCcchHHHHHHcCCCEEEecCCCccchhhHHHHHhC-Cceeec--CCHHHHHHHHHHHH
Confidence 999866 99999999 99999999999999999999998765555 4799999999 999876 58999999999999
Q ss_pred cC
Q 012412 418 EG 419 (464)
Q Consensus 418 ~~ 419 (464)
.|
T Consensus 346 ~~ 347 (382)
T PLN02605 346 GD 347 (382)
T ss_pred cC
Confidence 87
|
|
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.8e-10 Score=113.72 Aligned_cols=328 Identities=17% Similarity=0.162 Sum_probs=170.0
Q ss_pred ccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEccCCCCCCCCCCccCHHHHHHHHHHhCcHHHHHH
Q 012412 24 QGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGYAQAESIEAYLERFWQIGPQTLTEL 103 (464)
Q Consensus 24 ~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 103 (464)
.|.-..+..|++.|+++||+|++++...............++.+..++..... ............. ....+
T Consensus 21 GG~~~~~~~l~~~L~~~g~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-------~~~~~ 91 (398)
T cd03800 21 GGQNVYVLELARALARLGHEVDIFTRRIDDALPPIVELAPGVRVVRVPAGPAE--YLPKEELWPYLDE-------FADDL 91 (398)
T ss_pred CceeehHHHHHHHHhccCceEEEEEecCCcccCCccccccceEEEeccccccc--CCChhhcchhHHH-------HHHHH
Confidence 47888999999999999999999986543322110112456777766532111 1111111111111 11222
Q ss_pred HHHhcCCCCCccEEEeCCch--hhHHHHHHHcCCccEEEecchHHHHHHHhhhhcCcccCCCCCCceeCCCCCCCCCCCC
Q 012412 104 VEKMNGSDSPVDCIVYDSIL--LWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNEILLPGMPPLEPQDM 181 (464)
Q Consensus 104 ~~~l~~~~~p~DlVI~D~~~--~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~p~~p~~~~~~~ 181 (464)
++.+.....++|+|++.... ..+..+++.+++|++...+.... ......
T Consensus 92 ~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~-----------------------------~~~~~~ 142 (398)
T cd03800 92 LRFLRREGGRPDLIHAHYWDSGLVALLLARRLGIPLVHTFHSLGA-----------------------------VKRRHL 142 (398)
T ss_pred HHHHHhcCCCccEEEEecCccchHHHHHHhhcCCceEEEeecccc-----------------------------cCCccc
Confidence 23232222235999997543 44667788999998764332100 000000
Q ss_pred CCccccCCCCchHHHHHHHHHhhhccCCcEEEecchhhhhHHHHHHHH-hcCCeeeecccCCCccccccccCcccccccc
Q 012412 182 PSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLR-KTWSLRTIGPTIPSFYLDKQIEDDKDYGFSM 260 (464)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~-~~~~~~~vgp~~~~~~~~~~~~~~~~~~~~~ 260 (464)
.... . ...... .. .....+..++.+++.|....+. ...... ...++..|.+-+....
T Consensus 143 ~~~~---~-~~~~~~-~~-~~~~~~~~ad~ii~~s~~~~~~-~~~~~~~~~~~~~vi~ng~~~~~--------------- 200 (398)
T cd03800 143 GAAD---T-YEPARR-IE-AEERLLRAADRVIASTPQEAEE-LYSLYGAYPRRIRVVPPGVDLER--------------- 200 (398)
T ss_pred cccc---c-cchhhh-hh-HHHHHHhhCCEEEEcCHHHHHH-HHHHccccccccEEECCCCCccc---------------
Confidence 0000 0 000000 01 1112346678888888664433 111111 1111333332211100
Q ss_pred cccc--hhHHHHHhhcCCCCceEEEEeccccc-CCHHHHHHHHHHHhh--CCCeEEEEEcCcccCcCC------hhhhhh
Q 012412 261 FKSS--TEACMKWLNDRAKESVVYVSYGSFVE-LKAEEMEELAWGLKS--SDQHFLWVVRESEQAKLP------KKFSDE 329 (464)
Q Consensus 261 ~~~~--~~~~~~~l~~~~~~~~v~vs~Gs~~~-~~~~~~~~~~~al~~--~~~~~i~~~~~~~~~~~~------~~~~~~ 329 (464)
+.+. .......... +.+..+++..|+... -..+.+-..+..+.+ .+.+++++.++... ... ..+.+.
T Consensus 201 ~~~~~~~~~~~~~~~~-~~~~~~i~~~gr~~~~k~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~-~~~~~~~~~~~~~~~ 278 (398)
T cd03800 201 FTPYGRAEARRARLLR-DPDKPRILAVGRLDPRKGIDTLIRAYAELPELRERANLVIVGGPRDD-ILAMDEEELRELARE 278 (398)
T ss_pred eecccchhhHHHhhcc-CCCCcEEEEEcccccccCHHHHHHHHHHHHHhCCCeEEEEEECCCCc-chhhhhHHHHHHHHh
Confidence 0110 0110111122 233467788888762 223333233333322 24566555544321 111 112222
Q ss_pred ccCCCcEEEEeccChH---Hhhccccccceecc----CChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeecc
Q 012412 330 TLTSHKSLVVSWCPQL---EVLAHEATGCFVTH----CGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP 402 (464)
Q Consensus 330 ~~~~~nv~~~~~~p~~---~ll~~~~~~~vI~H----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~ 402 (464)
....+|+.+.+|+|+. .++..+++ +++. |-..++.||+++|+|+|+... ......+++. +.|...+
T Consensus 279 ~~~~~~v~~~g~~~~~~~~~~~~~adi--~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~----~~~~e~i~~~-~~g~~~~ 351 (398)
T cd03800 279 LGVIDRVDFPGRVSREDLPALYRAADV--FVNPALYEPFGLTALEAMACGLPVVATAV----GGPRDIVVDG-VTGLLVD 351 (398)
T ss_pred cCCCceEEEeccCCHHHHHHHHHhCCE--EEecccccccCcHHHHHHhcCCCEEECCC----CCHHHHccCC-CCeEEeC
Confidence 2245789999999976 56889999 7743 223589999999999997663 3466678888 8899888
Q ss_pred CcCHHHHHHHHHHHhcCC
Q 012412 403 IVKRDAIADCISEILEGE 420 (464)
Q Consensus 403 ~~~~~~l~~~i~~ll~~~ 420 (464)
..+.+++.++|.++++|+
T Consensus 352 ~~~~~~l~~~i~~l~~~~ 369 (398)
T cd03800 352 PRDPEALAAALRRLLTDP 369 (398)
T ss_pred CCCHHHHHHHHHHHHhCH
Confidence 668999999999999885
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. |
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.48 E-value=8e-11 Score=116.29 Aligned_cols=81 Identities=21% Similarity=0.227 Sum_probs=64.4
Q ss_pred CCcEEEEeccChH---Hhhccccccceec---cCCh-hHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcC
Q 012412 333 SHKSLVVSWCPQL---EVLAHEATGCFVT---HCGW-NSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVK 405 (464)
Q Consensus 333 ~~nv~~~~~~p~~---~ll~~~~~~~vI~---HgG~-~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~ 405 (464)
.++|.+.+++|+. .++..+++ +|. +.|. .++.||+++|+|+|+.. .......+++. ..|..++..+
T Consensus 280 ~~~V~f~G~v~~~~~~~~l~~adv--~v~~s~~e~~~~~llEAmA~G~PVIas~----~~g~~e~i~~~-~~G~lv~~~d 352 (396)
T cd03818 280 LSRVHFLGRVPYDQYLALLQVSDV--HVYLTYPFVLSWSLLEAMACGCLVVGSD----TAPVREVITDG-ENGLLVDFFD 352 (396)
T ss_pred cceEEEeCCCCHHHHHHHHHhCcE--EEEcCcccccchHHHHHHHCCCCEEEcC----CCCchhhcccC-CceEEcCCCC
Confidence 4789999999976 57788998 653 2233 48899999999999754 44566777776 7788887678
Q ss_pred HHHHHHHHHHHhcCC
Q 012412 406 RDAIADCISEILEGE 420 (464)
Q Consensus 406 ~~~l~~~i~~ll~~~ 420 (464)
+++++++|.++++|+
T Consensus 353 ~~~la~~i~~ll~~~ 367 (396)
T cd03818 353 PDALAAAVIELLDDP 367 (396)
T ss_pred HHHHHHHHHHHHhCH
Confidence 999999999999986
|
ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). |
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.48 E-value=1e-10 Score=113.65 Aligned_cols=129 Identities=16% Similarity=0.186 Sum_probs=89.7
Q ss_pred CceEEEEeccccc-CCHHHHHHHHHHHhh-CCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChH---Hhhcccc
Q 012412 278 ESVVYVSYGSFVE-LKAEEMEELAWGLKS-SDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQL---EVLAHEA 352 (464)
Q Consensus 278 ~~~v~vs~Gs~~~-~~~~~~~~~~~al~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~---~ll~~~~ 352 (464)
++.+++..|+... -..+.+-.++..+.. .+..+++...+... +.+. . ..+|+.+.+|+++. .++..+|
T Consensus 196 ~~~~i~~~G~~~~~k~~~~~i~~~~~l~~~~~~~l~i~G~~~~~----~~~~-~--~~~~v~~~g~~~~~~~~~~~~~~d 268 (364)
T cd03814 196 DRPVLLYVGRLAPEKNLEALLDADLPLRRRPPVRLVIVGDGPAR----ARLE-A--RYPNVHFLGFLDGEELAAAYASAD 268 (364)
T ss_pred CCeEEEEEeccccccCHHHHHHHHHHhhhcCCceEEEEeCCchH----HHHh-c--cCCcEEEEeccCHHHHHHHHHhCC
Confidence 3467778887652 233444444444433 23455544433221 1121 1 56899999999876 5899999
Q ss_pred ccceeccCC----hhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcCC
Q 012412 353 TGCFVTHCG----WNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGE 420 (464)
Q Consensus 353 ~~~vI~HgG----~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~~ 420 (464)
+ +|+.+. .+++.||+++|+|+|+.+.. .+...+++. +.|...+..+.+++.+++.+++.|+
T Consensus 269 ~--~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~----~~~~~i~~~-~~g~~~~~~~~~~l~~~i~~l~~~~ 333 (364)
T cd03814 269 V--FVFPSRTETFGLVVLEAMASGLPVVAPDAG----GPADIVTDG-ENGLLVEPGDAEAFAAALAALLADP 333 (364)
T ss_pred E--EEECcccccCCcHHHHHHHcCCCEEEcCCC----CchhhhcCC-cceEEcCCCCHHHHHHHHHHHHcCH
Confidence 9 886654 47899999999999987744 466777888 8898888778899999999999986
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.5e-10 Score=113.30 Aligned_cols=135 Identities=21% Similarity=0.221 Sum_probs=85.6
Q ss_pred CCceEEEEeccccc-CCHHHHHHHHHHHhhC-CCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChH---Hhhccc
Q 012412 277 KESVVYVSYGSFVE-LKAEEMEELAWGLKSS-DQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQL---EVLAHE 351 (464)
Q Consensus 277 ~~~~v~vs~Gs~~~-~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~---~ll~~~ 351 (464)
.++.+++..|+... -..+.+-..+..+.+. +.++++...+.....+.+..... ..+|+.+.+++++. +++..+
T Consensus 218 ~~~~~i~~~G~~~~~k~~~~l~~~~~~l~~~~~~~l~i~G~~~~~~~~~~~~~~~--~~~~v~~~g~~~~~~~~~~~~~~ 295 (394)
T cd03794 218 DDKFVVLYAGNIGRAQGLDTLLEAAALLKDRPDIRFLIVGDGPEKEELKELAKAL--GLDNVTFLGRVPKEELPELLAAA 295 (394)
T ss_pred CCcEEEEEecCcccccCHHHHHHHHHHHhhcCCeEEEEeCCcccHHHHHHHHHHc--CCCcEEEeCCCChHHHHHHHHhh
Confidence 45578888888762 2344444444444433 45555443222111111110111 45799999999866 678899
Q ss_pred cccceeccCC---------hhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcCC
Q 012412 352 ATGCFVTHCG---------WNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGE 420 (464)
Q Consensus 352 ~~~~vI~HgG---------~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~~ 420 (464)
++ +|.... .+++.||+++|+|+|+.+... ....+.+. +.|...+..+.+++.++|.+++.|+
T Consensus 296 di--~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~----~~~~~~~~-~~g~~~~~~~~~~l~~~i~~~~~~~ 366 (394)
T cd03794 296 DV--GLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGE----SAELVEEA-GAGLVVPPGDPEALAAAILELLDDP 366 (394)
T ss_pred Ce--eEEeccCcccccccCchHHHHHHHCCCcEEEecCCC----chhhhccC-CcceEeCCCCHHHHHHHHHHHHhCh
Confidence 99 663322 234799999999999887554 34445555 6777777568999999999999886
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. |
| >PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Probab=99.45 E-value=2.6e-10 Score=114.90 Aligned_cols=139 Identities=15% Similarity=0.152 Sum_probs=93.1
Q ss_pred ceEEEEecccccCCHHHHHHHHHHHhhC-CCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChH---Hhhcccccc
Q 012412 279 SVVYVSYGSFVELKAEEMEELAWGLKSS-DQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQL---EVLAHEATG 354 (464)
Q Consensus 279 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~---~ll~~~~~~ 354 (464)
..+++..|++. ..+.+..+++++++. +.+++++-.+. ..+++.+.. ...||.+.+++++. .++..+|+
T Consensus 263 ~~~i~~vGrl~--~~K~~~~li~a~~~~~~~~l~ivG~G~----~~~~l~~~~-~~~~V~f~G~v~~~ev~~~~~~aDv- 334 (465)
T PLN02871 263 KPLIVYVGRLG--AEKNLDFLKRVMERLPGARLAFVGDGP----YREELEKMF-AGTPTVFTGMLQGDELSQAYASGDV- 334 (465)
T ss_pred CeEEEEeCCCc--hhhhHHHHHHHHHhCCCcEEEEEeCCh----HHHHHHHHh-ccCCeEEeccCCHHHHHHHHHHCCE-
Confidence 35667778775 345566677777765 45555444332 223333221 23689999999865 68999999
Q ss_pred ceeccCC----hhHHHHHHHhCCcEeccCCccchhhHHHHHHh---HhcceeeccCcCHHHHHHHHHHHhcCCc-hHHHH
Q 012412 355 CFVTHCG----WNSTMEALSLGVPMVAMPQWSDQSTNAKYILD---VWKTGLKFPIVKRDAIADCISEILEGER-GKELR 426 (464)
Q Consensus 355 ~vI~HgG----~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~---~~G~g~~l~~~~~~~l~~~i~~ll~~~~-~~~~~ 426 (464)
+|.-.. ..++.||+++|+|+|+.... .....+++ . +.|...+.-+.+++.++|.++++|++ .+++.
T Consensus 335 -~V~pS~~E~~g~~vlEAmA~G~PVI~s~~g----g~~eiv~~~~~~-~~G~lv~~~d~~~la~~i~~ll~~~~~~~~~~ 408 (465)
T PLN02871 335 -FVMPSESETLGFVVLEAMASGVPVVAARAG----GIPDIIPPDQEG-KTGFLYTPGDVDDCVEKLETLLADPELRERMG 408 (465)
T ss_pred -EEECCcccccCcHHHHHHHcCCCEEEcCCC----CcHhhhhcCCCC-CceEEeCCCCHHHHHHHHHHHHhCHHHHHHHH
Confidence 884332 35789999999999976532 34555666 7 78888886689999999999998862 12344
Q ss_pred HHHHH
Q 012412 427 RNAGK 431 (464)
Q Consensus 427 ~~a~~ 431 (464)
+++++
T Consensus 409 ~~a~~ 413 (465)
T PLN02871 409 AAARE 413 (465)
T ss_pred HHHHH
Confidence 44444
|
|
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.42 E-value=2.5e-10 Score=110.57 Aligned_cols=133 Identities=18% Similarity=0.200 Sum_probs=87.3
Q ss_pred CCceEEEEeccccc-CCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChH---Hhhcccc
Q 012412 277 KESVVYVSYGSFVE-LKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQL---EVLAHEA 352 (464)
Q Consensus 277 ~~~~v~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~---~ll~~~~ 352 (464)
..+.+++..|+... -..+.+-..+..+.+.+.++++...+..... ..... ...+++.+.+|+++. .++..++
T Consensus 189 ~~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~l~i~G~~~~~~~--~~~~~--~~~~~v~~~g~~~~~~~~~~~~~ad 264 (359)
T cd03823 189 GGRLRFGFIGQLTPHKGVDLLLEAFKRLPRGDIELVIVGNGLELEE--ESYEL--EGDPRVEFLGAYPQEEIDDFYAEID 264 (359)
T ss_pred CCceEEEEEecCccccCHHHHHHHHHHHHhcCcEEEEEcCchhhhH--HHHhh--cCCCeEEEeCCCCHHHHHHHHHhCC
Confidence 44577788888752 2233333333333333456555543321111 11100 145899999999766 6799999
Q ss_pred ccceec----cCCh-hHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcCC
Q 012412 353 TGCFVT----HCGW-NSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGE 420 (464)
Q Consensus 353 ~~~vI~----HgG~-~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~~ 420 (464)
+ +|+ ..|+ .++.||+++|+|+|+.+ .......+++. +.|...+..+.+++.+++.++++|+
T Consensus 265 ~--~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~----~~~~~e~i~~~-~~g~~~~~~d~~~l~~~i~~l~~~~ 330 (359)
T cd03823 265 V--LVVPSIWPENFPLVIREALAAGVPVIASD----IGGMAELVRDG-VNGLLFPPGDAEDLAAALERLIDDP 330 (359)
T ss_pred E--EEEcCcccCCCChHHHHHHHCCCCEEECC----CCCHHHHhcCC-CcEEEECCCCHHHHHHHHHHHHhCh
Confidence 9 773 2344 47899999999999865 34567777777 7888888667999999999999986
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). |
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.42 E-value=7.8e-10 Score=108.13 Aligned_cols=133 Identities=18% Similarity=0.244 Sum_probs=86.9
Q ss_pred CceEEEEecccccCCHHHHHHHHHHH----hhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChH-Hhhcccc
Q 012412 278 ESVVYVSYGSFVELKAEEMEELAWGL----KSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQL-EVLAHEA 352 (464)
Q Consensus 278 ~~~v~vs~Gs~~~~~~~~~~~~~~al----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~-~ll~~~~ 352 (464)
+..+++.+|.... .+.+..+++++ .+.+.++++...+.....+ ..........+++.+.++.++. .++..++
T Consensus 196 ~~~~il~~g~l~~--~K~~~~li~a~~~l~~~~~~~l~i~G~g~~~~~~-~~~~~~~~~~~~v~~~g~~~~~~~~~~~~d 272 (371)
T cd04962 196 GEKVLIHISNFRP--VKRIDDVIRIFAKVRKEVPARLLLVGDGPERSPA-ERLARELGLQDDVLFLGKQDHVEELLSIAD 272 (371)
T ss_pred CCeEEEEeccccc--ccCHHHHHHHHHHHHhcCCceEEEEcCCcCHHHH-HHHHHHcCCCceEEEecCcccHHHHHHhcC
Confidence 3467777887762 23333333333 2345566555433222111 1122222245789999988755 8899999
Q ss_pred ccceec---c-CChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcCC
Q 012412 353 TGCFVT---H-CGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGE 420 (464)
Q Consensus 353 ~~~vI~---H-gG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~~ 420 (464)
+ +|. + |...++.||+++|+|+|+.. ....+..+++. ..|...+..+.+++.+++.++++|+
T Consensus 273 ~--~v~ps~~E~~~~~~~EAma~g~PvI~s~----~~~~~e~i~~~-~~G~~~~~~~~~~l~~~i~~l~~~~ 337 (371)
T cd04962 273 L--FLLPSEKESFGLAALEAMACGVPVVASN----AGGIPEVVKHG-ETGFLVDVGDVEAMAEYALSLLEDD 337 (371)
T ss_pred E--EEeCCCcCCCccHHHHHHHcCCCEEEeC----CCCchhhhcCC-CceEEcCCCCHHHHHHHHHHHHhCH
Confidence 9 772 2 33459999999999999854 44567777776 7787777668999999999999886
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.42 E-value=8e-10 Score=106.65 Aligned_cols=318 Identities=16% Similarity=0.125 Sum_probs=170.5
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccc-cccCCCCCCceEEEccCCCCCCCCCCccCHHHHHHHHH
Q 012412 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKS-LHRDSSSSSIPLEAISDGYDEGGYAQAESIEAYLERFW 93 (464)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 93 (464)
||++++....|+......++++|.++||+|++++....... .. ..++.+..++..... ......+..+.
T Consensus 1 kIl~i~~~~~g~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~------~~~~~~~~~~~ 70 (359)
T cd03808 1 KILHIVTVDGGLYSFRLPLIKALRAAGYEVHVVAPPGDELEELE----ALGVKVIPIPLDRRG------INPFKDLKALL 70 (359)
T ss_pred CeeEEEecchhHHHHHHHHHHHHHhcCCeeEEEecCCCcccccc----cCCceEEeccccccc------cChHhHHHHHH
Confidence 58887777789999999999999999999999998765542 22 556777777632211 11111111111
Q ss_pred HhCcHHHHHHHHHhcCCCCCccEEEeCCch--hhHHHHHHHcCCccEEEecchHHHHHHHhhhhcCcccCCCCCCceeCC
Q 012412 94 QIGPQTLTELVEKMNGSDSPVDCIVYDSIL--LWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNEILLP 171 (464)
Q Consensus 94 ~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~--~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~p 171 (464)
.+...+++ .+| |+|++.... ..+..+++..+.|.++.........
T Consensus 71 -----~~~~~~~~----~~~-dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----------------------- 117 (359)
T cd03808 71 -----RLYRLLRK----ERP-DIVHTHTPKPGILGRLAARLAGVPKVIYTVHGLGFV----------------------- 117 (359)
T ss_pred -----HHHHHHHh----cCC-CEEEEccccchhHHHHHHHHcCCCCEEEEecCcchh-----------------------
Confidence 12233332 144 999987543 2244445546666665433220000
Q ss_pred CCCCCCCCCCCCccccCCCCchHHHHHHHHHhhhccCCcEEEecchhhhhHHHHHHHHhc-CCeeeecccCCCccccccc
Q 012412 172 GMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKT-WSLRTIGPTIPSFYLDKQI 250 (464)
Q Consensus 172 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~-~~~~~vgp~~~~~~~~~~~ 250 (464)
... ... .......+. +. .....+.+++.|....+. ........ .....+.|...+..
T Consensus 118 ----~~~----~~~-----~~~~~~~~~-~~--~~~~~d~ii~~s~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~----- 175 (359)
T cd03808 118 ----FTS----GGL-----KRRLYLLLE-RL--ALRFTDKVIFQNEDDRDL-ALKLGIIKKKKTVLIPGSGVDLD----- 175 (359)
T ss_pred ----hcc----chh-----HHHHHHHHH-HH--HHhhccEEEEcCHHHHHH-HHHhcCCCcCceEEecCCCCChh-----
Confidence 000 000 111222222 11 224557888887654432 11111000 01222222211100
Q ss_pred cCcccccccccccchhHHHHHhhcCCCCceEEEEeccccc-CCHHHHHHHHHHHhh--CCCeEEEEEcCcccCcCChhhh
Q 012412 251 EDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVE-LKAEEMEELAWGLKS--SDQHFLWVVRESEQAKLPKKFS 327 (464)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~-~~~~~~~~~~~al~~--~~~~~i~~~~~~~~~~~~~~~~ 327 (464)
. +.+.... ...++.+++..|+... -..+.+-+.+..+.+ .+.++++...+...........
T Consensus 176 ----~-----~~~~~~~-------~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~ 239 (359)
T cd03808 176 ----R-----FSPSPEP-------IPEDDPVFLFVARLLKDKGIDELLEAARILKAKGPNVRLLLVGDGDEENPAAILEI 239 (359)
T ss_pred ----h-----cCccccc-------cCCCCcEEEEEeccccccCHHHHHHHHHHHHhcCCCeEEEEEcCCCcchhhHHHHH
Confidence 0 0000000 1234578888888762 234444444444443 2345544433322111111001
Q ss_pred hhccCCCcEEEEeccChH-HhhccccccceeccCC----hhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeecc
Q 012412 328 DETLTSHKSLVVSWCPQL-EVLAHEATGCFVTHCG----WNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP 402 (464)
Q Consensus 328 ~~~~~~~nv~~~~~~p~~-~ll~~~~~~~vI~HgG----~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~ 402 (464)
......++|.+.++..+. .++..+++ +|.-+. .+++.||+++|+|+|+.+.. .....+++. +.|...+
T Consensus 240 ~~~~~~~~v~~~g~~~~~~~~~~~adi--~i~ps~~e~~~~~~~Ea~~~G~Pvi~s~~~----~~~~~i~~~-~~g~~~~ 312 (359)
T cd03808 240 EKLGLEGRVEFLGFRDDVPELLAAADV--FVLPSYREGLPRVLLEAMAMGRPVIATDVP----GCREAVIDG-VNGFLVP 312 (359)
T ss_pred HhcCCcceEEEeeccccHHHHHHhccE--EEecCcccCcchHHHHHHHcCCCEEEecCC----CchhhhhcC-cceEEEC
Confidence 121245789998885544 89999999 775432 57899999999999986543 445666767 7888877
Q ss_pred CcCHHHHHHHHHHHhcCC
Q 012412 403 IVKRDAIADCISEILEGE 420 (464)
Q Consensus 403 ~~~~~~l~~~i~~ll~~~ 420 (464)
.-+.+++.+++.+++.|+
T Consensus 313 ~~~~~~~~~~i~~l~~~~ 330 (359)
T cd03808 313 PGDAEALADAIERLIEDP 330 (359)
T ss_pred CCCHHHHHHHHHHHHhCH
Confidence 668999999999999886
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. |
| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.1e-09 Score=108.88 Aligned_cols=143 Identities=11% Similarity=0.081 Sum_probs=85.2
Q ss_pred CceEEEEecccccCCHHHHHHHHHHHhhC----CCeEEEEEcCcccCcCChhhh---hhccCCCcEEEEeccChH---Hh
Q 012412 278 ESVVYVSYGSFVELKAEEMEELAWGLKSS----DQHFLWVVRESEQAKLPKKFS---DETLTSHKSLVVSWCPQL---EV 347 (464)
Q Consensus 278 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~----~~~~i~~~~~~~~~~~~~~~~---~~~~~~~nv~~~~~~p~~---~l 347 (464)
++.+++..|+.. ..+-+..++++++.+ +.++++ +|.+. ..+.+. +.. ..+||.+.+|+|+. .+
T Consensus 228 ~~~~i~~~G~l~--~~kg~~~li~a~~~l~~~~~~~l~i-vG~g~---~~~~l~~~~~~~-~l~~v~f~G~~~~~~~~~~ 300 (412)
T PRK10307 228 GKKIVLYSGNIG--EKQGLELVIDAARRLRDRPDLIFVI-CGQGG---GKARLEKMAQCR-GLPNVHFLPLQPYDRLPAL 300 (412)
T ss_pred CCEEEEEcCccc--cccCHHHHHHHHHHhccCCCeEEEE-ECCCh---hHHHHHHHHHHc-CCCceEEeCCCCHHHHHHH
Confidence 346777788876 233444445554432 234443 33321 122222 221 22589999999876 67
Q ss_pred hccccccceeccCCh------hHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcCCc
Q 012412 348 LAHEATGCFVTHCGW------NSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGER 421 (464)
Q Consensus 348 l~~~~~~~vI~HgG~------~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~~~ 421 (464)
+..+|+.++.+..+. +.+.|++++|+|+|+....+. .....++ +.|+..+..+.++|+++|.++++|++
T Consensus 301 ~~~aDi~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~--~~~~~i~---~~G~~~~~~d~~~la~~i~~l~~~~~ 375 (412)
T PRK10307 301 LKMADCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGT--ELGQLVE---GIGVCVEPESVEALVAAIAALARQAL 375 (412)
T ss_pred HHhcCEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCc--hHHHHHh---CCcEEeCCCCHHHHHHHHHHHHhCHH
Confidence 889998444444332 246899999999998764331 1122332 45777766689999999999998862
Q ss_pred -hHHHHHHHHHH
Q 012412 422 -GKELRRNAGKW 432 (464)
Q Consensus 422 -~~~~~~~a~~l 432 (464)
.+.+++++++.
T Consensus 376 ~~~~~~~~a~~~ 387 (412)
T PRK10307 376 LRPKLGTVAREY 387 (412)
T ss_pred HHHHHHHHHHHH
Confidence 23444555443
|
|
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.39 E-value=8.8e-10 Score=109.27 Aligned_cols=336 Identities=13% Similarity=0.036 Sum_probs=168.5
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEccCCCCCCCCCCccCHHHHHHHH
Q 012412 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGYAQAESIEAYLERF 92 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 92 (464)
+.||.+++..-.|+-.++..+|+.|+++||+|++++....... .......++.++.++.... ........+..+
T Consensus 3 ~~~~~~~~~~~~~~~~R~~~~a~~L~~~G~~V~ii~~~~~~~~-~~~~~~~~v~~~~~~~~~~-----~~~~~~~~~~~~ 76 (415)
T cd03816 3 RKRVCVLVLGDIGRSPRMQYHALSLAKHGWKVDLVGYLETPPH-DEILSNPNITIHPLPPPPQ-----RLNKLPFLLFAP 76 (415)
T ss_pred ccEEEEEEecccCCCHHHHHHHHHHHhcCceEEEEEecCCCCC-HHHhcCCCEEEEECCCCcc-----ccccchHHHHHH
Confidence 4577777777778889999999999999999999997532211 1001256788888763210 111112222221
Q ss_pred HHhCcHHHHHHHHHhcCCCCCccEEEeCC-ch----hhHHHHHHHcCCccEEEecchHHHHHHHhhhhcCcccCCCCCCc
Q 012412 93 WQIGPQTLTELVEKMNGSDSPVDCIVYDS-IL----LWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNE 167 (464)
Q Consensus 93 ~~~~~~~l~~~~~~l~~~~~p~DlVI~D~-~~----~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 167 (464)
..... .+..++..+....+ +|+|++.. .. ..+..+++..++|.|.......... .
T Consensus 77 ~~~~~-~~~~~~~~l~~~~~-~Dvi~~~~~~~~~~~~~a~~~~~~~~~~~V~~~h~~~~~~------~------------ 136 (415)
T cd03816 77 LKVLW-QFFSLLWLLYKLRP-ADYILIQNPPSIPTLLIAWLYCLLRRTKLIIDWHNYGYTI------L------------ 136 (415)
T ss_pred HHHHH-HHHHHHHHHHhcCC-CCEEEEeCCCCchHHHHHHHHHHHhCCeEEEEcCCchHHH------H------------
Confidence 11111 11222222222223 59999853 21 1244557778999887444321110 0
Q ss_pred eeCCCCCCCCCCCCCCccccCCCCchHHHHHHHHHhhhccCCcEEEecchhhhhHHHHHHHHhcCCeeeecccCCCcccc
Q 012412 168 ILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTWSLRTIGPTIPSFYLD 247 (464)
Q Consensus 168 ~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~vgp~~~~~~~~ 247 (464)
...... ......+..++. +. .+..++.+++.|...-+. ....-....++..|. +...
T Consensus 137 -------~~~~~~-------~~~~~~~~~~~e-~~--~~~~ad~ii~vS~~~~~~-l~~~~~~~~ki~vI~----Ng~~- 193 (415)
T cd03816 137 -------ALKLGE-------NHPLVRLAKWYE-KL--FGRLADYNLCVTKAMKED-LQQFNNWKIRATVLY----DRPP- 193 (415)
T ss_pred -------hcccCC-------CCHHHHHHHHHH-HH--HhhcCCEeeecCHHHHHH-HHhhhccCCCeeecC----CCCH-
Confidence 000000 000011222222 22 235678888888653332 111100001222221 1100
Q ss_pred ccccCcccccccccccchhH--HHHHhh----------------cCCCCceEEEEeccccc-CCHHHHHHHHHHHhh---
Q 012412 248 KQIEDDKDYGFSMFKSSTEA--CMKWLN----------------DRAKESVVYVSYGSFVE-LKAEEMEELAWGLKS--- 305 (464)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~--~~~~l~----------------~~~~~~~v~vs~Gs~~~-~~~~~~~~~~~al~~--- 305 (464)
.+ +.|.... ...+.. ..+++..++++.|.+.. -..+.+-..+..+++
T Consensus 194 ~~-----------f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~ 262 (415)
T cd03816 194 EQ-----------FRPLPLEEKHELFLKLAKTFLTRELRIGAVQLSEERPALLVSSTSWTPDEDFGILLDALVAYEKSAA 262 (415)
T ss_pred HH-----------ceeCcHHHHHHHHHhccccccccccccccceecCCCceEEEEeccccCCCCHHHHHHHHHHHHHhhc
Confidence 00 0111111 111110 11244567777787652 233333333333332
Q ss_pred -----CCCeEEEEEcCcccCcCChhhhhhccCCCcEEEE-eccChH---Hhhccccccceec----c-C-C-hhHHHHHH
Q 012412 306 -----SDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVV-SWCPQL---EVLAHEATGCFVT----H-C-G-WNSTMEAL 369 (464)
Q Consensus 306 -----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~-~~~p~~---~ll~~~~~~~vI~----H-g-G-~~s~~eal 369 (464)
.+.+++++-.+...+.+. +..+.+.. +|+.+. +|+|.. ++|..+|+ +|. . | | -.++.||+
T Consensus 263 ~~~~~~~i~l~ivG~G~~~~~l~-~~~~~~~l-~~~~~~~g~~~~~~~~~~l~~aDv--~v~~~~~~~~~~~p~~~~Eam 338 (415)
T cd03816 263 TGPKLPKLLCIITGKGPLKEKYL-ERIKELKL-KKVTIRTPWLSAEDYPKLLASADL--GVSLHTSSSGLDLPMKVVDMF 338 (415)
T ss_pred ccccCCCEEEEEEecCccHHHHH-HHHHHcCC-CcEEEEcCcCCHHHHHHHHHhCCE--EEEccccccccCCcHHHHHHH
Confidence 123444443332222121 12222112 466655 688855 67889999 663 1 1 2 34799999
Q ss_pred HhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcC
Q 012412 370 SLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEG 419 (464)
Q Consensus 370 ~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~ 419 (464)
++|+|+|+.. .......+++. +.|.... +.++|+++|.++++|
T Consensus 339 a~G~PVI~s~----~~~~~eiv~~~-~~G~lv~--d~~~la~~i~~ll~~ 381 (415)
T cd03816 339 GCGLPVCALD----FKCIDELVKHG-ENGLVFG--DSEELAEQLIDLLSN 381 (415)
T ss_pred HcCCCEEEeC----CCCHHHHhcCC-CCEEEEC--CHHHHHHHHHHHHhc
Confidence 9999999754 34666778888 8898874 899999999999988
|
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. |
| >COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.4e-10 Score=102.40 Aligned_cols=148 Identities=18% Similarity=0.122 Sum_probs=115.8
Q ss_pred CceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChH-Hhhccccccce
Q 012412 278 ESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQL-EVLAHEATGCF 356 (464)
Q Consensus 278 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~-~ll~~~~~~~v 356 (464)
..-|+|++|..- +..+.-+++..|++.++.+-+++++. .+-..+.+.++...+|+.+......+ .|+..|++ .
T Consensus 158 ~r~ilI~lGGsD--pk~lt~kvl~~L~~~~~nl~iV~gs~--~p~l~~l~k~~~~~~~i~~~~~~~dma~LMke~d~--a 231 (318)
T COG3980 158 KRDILITLGGSD--PKNLTLKVLAELEQKNVNLHIVVGSS--NPTLKNLRKRAEKYPNINLYIDTNDMAELMKEADL--A 231 (318)
T ss_pred hheEEEEccCCC--hhhhHHHHHHHhhccCeeEEEEecCC--CcchhHHHHHHhhCCCeeeEecchhHHHHHHhcch--h
Confidence 335999998642 33466677788887776666777644 34445555554466888888777755 89999999 9
Q ss_pred eccCChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeecc-CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Q 012412 357 VTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP-IVKRDAIADCISEILEGERGKELRRNAGKWRKL 435 (464)
Q Consensus 357 I~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~-~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~ 435 (464)
|+.||. |+.|++..|+|.+++|+..-|.-.|..++.+ |+-..+. .+..+.....+.++..|. ..|++...-.+.
T Consensus 232 I~AaGs-tlyEa~~lgvP~l~l~~a~NQ~~~a~~f~~l-g~~~~l~~~l~~~~~~~~~~~i~~d~---~~rk~l~~~~~~ 306 (318)
T COG3980 232 ISAAGS-TLYEALLLGVPSLVLPLAENQIATAKEFEAL-GIIKQLGYHLKDLAKDYEILQIQKDY---ARRKNLSFGSKL 306 (318)
T ss_pred eeccch-HHHHHHHhcCCceEEeeeccHHHHHHHHHhc-CchhhccCCCchHHHHHHHHHhhhCH---HHhhhhhhccce
Confidence 998775 8999999999999999999999999999999 9888887 788889999999999997 667766554444
Q ss_pred H
Q 012412 436 A 436 (464)
Q Consensus 436 ~ 436 (464)
+
T Consensus 307 i 307 (318)
T COG3980 307 I 307 (318)
T ss_pred e
Confidence 4
|
|
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.9e-09 Score=113.95 Aligned_cols=377 Identities=14% Similarity=0.116 Sum_probs=198.8
Q ss_pred CCCcEEEEEcCCCc---------------cChHHHHHHHHHHHhCC--CeEEEEeCccccccc--------c--------
Q 012412 11 CKLAHCLVLTYPGQ---------------GHINPLLQFSRRLQHKG--IKVTLVTTRFFYKSL--------H-------- 57 (464)
Q Consensus 11 ~~~~~il~~~~~~~---------------GH~~p~l~la~~L~~rG--h~V~~~~~~~~~~~~--------~-------- 57 (464)
.+++.|++++..+. |+..-.+.||++|+++| |+|.++|....-..+ +
T Consensus 167 ~~~~~I~liS~HG~~~~~~~elg~~~DtGGq~vYV~ELAraLa~~~gv~~Vdl~TR~~~~~~~~~~y~~p~e~~~~~~~~ 246 (1050)
T TIGR02468 167 EKKLYIVLISLHGLVRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDWSYGEPTEMLTPRSSE 246 (1050)
T ss_pred cCceEEEEEccccCccccCcccCCCCCCCChHHHHHHHHHHHHhCCCCCEEEEEeCCcCccccccccCCccccccccccc
Confidence 44678887765432 46667799999999998 899999975432211 0
Q ss_pred ----cCCCCCCceEEEccCCCCCCCCCCccCHHHHHHHHHHhCcHHHHHH----HHHhcC-CCCCccEEEeCCch--hhH
Q 012412 58 ----RDSSSSSIPLEAISDGYDEGGYAQAESIEAYLERFWQIGPQTLTEL----VEKMNG-SDSPVDCIVYDSIL--LWA 126 (464)
Q Consensus 58 ----~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~l~~-~~~p~DlVI~D~~~--~~~ 126 (464)
......|+..+.+|.+-.. .+-....++.++..|.......+..+ .+++.. ....||+|-+.... ..+
T Consensus 247 ~~~~~~~~~~g~rIvRip~GP~~-~~l~Ke~L~~~l~ef~d~~l~~~~~~~~~~~~~~~~~~~~~pDvIHaHyw~sG~aa 325 (1050)
T TIGR02468 247 NDGDEMGESSGAYIIRIPFGPRD-KYIPKEELWPYIPEFVDGALSHIVNMSKVLGEQIGSGHPVWPYVIHGHYADAGDSA 325 (1050)
T ss_pred cccccccCCCCeEEEEeccCCCC-CCcCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCEEEECcchHHHHH
Confidence 0012348888888865432 22233344555555555444333322 222221 11125999998655 557
Q ss_pred HHHHHHcCCccEEEecchHHHHHHHhhhhcCcccCCCCCCceeCCCCCCCCCCCCCCccccCCCCchHHHHHHHHHhhhc
Q 012412 127 LDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNEILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENI 206 (464)
Q Consensus 127 ~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (464)
..+++.+|||+|...++....- ..... ........ .....+. +...+. ..-..+
T Consensus 326 ~~L~~~lgVP~V~T~HSLgr~K--~~~ll---------------------~~g~~~~~-~~~~~y~-~~~Ri~-~Ee~~l 379 (1050)
T TIGR02468 326 ALLSGALNVPMVLTGHSLGRDK--LEQLL---------------------KQGRMSKE-EINSTYK-IMRRIE-AEELSL 379 (1050)
T ss_pred HHHHHhhCCCEEEECccchhhh--hhhhc---------------------cccccccc-ccccccc-hHHHHH-HHHHHH
Confidence 8889999999887655431110 00000 00000000 0000000 111111 112234
Q ss_pred cCCcEEEecchhhhhHHHHHHHHhc-----------------------CC--eeeecccCCCccccccccCcccc-----
Q 012412 207 DKADWVLCNTFYELEEEVVEWLRKT-----------------------WS--LRTIGPTIPSFYLDKQIEDDKDY----- 256 (464)
Q Consensus 207 ~~~~~~l~~s~~~l~~~~~~~~~~~-----------------------~~--~~~vgp~~~~~~~~~~~~~~~~~----- 256 (464)
..++.+++.|..+.+..+.- +... .+ +.+.|--...+. |.....
T Consensus 380 ~~Ad~VIasT~qE~~eq~~l-Y~~~~~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~-----P~~~~~~~~~~ 453 (1050)
T TIGR02468 380 DASEIVITSTRQEIEEQWGL-YDGFDVILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIV-----PHDGDMDGETE 453 (1050)
T ss_pred HhcCEEEEeCHHHHHHHHHH-hccCCchhhhhhhhhhcccccccccCCCCeEEeCCCCcHHHcc-----CCCccccchhc
Confidence 77889999998877753322 2100 01 222221111111 110000
Q ss_pred c-----ccccccchhHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhCC-----CeEEEEEcCccc-CcCC--
Q 012412 257 G-----FSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSD-----QHFLWVVRESEQ-AKLP-- 323 (464)
Q Consensus 257 ~-----~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~-----~~~i~~~~~~~~-~~~~-- 323 (464)
| .....+...++..|+.. +++ .++++.|.+. +.+-+..+++|+..+. ..+.+++|+... ..+.
T Consensus 454 ~~~~~~~~~~~~~~~~l~r~~~~-pdk-pvIL~VGRL~--p~KGi~~LIeAf~~L~~l~~~~nL~LIiG~gdd~d~l~~~ 529 (1050)
T TIGR02468 454 GNEEHPAKPDPPIWSEIMRFFTN-PRK-PMILALARPD--PKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSSG 529 (1050)
T ss_pred ccccccccccchhhHHHHhhccc-CCC-cEEEEEcCCc--cccCHHHHHHHHHHhHhhccCCCEEEEEecCchhhhhhcc
Confidence 0 00001113456666654 333 4667778775 3444555666654431 234444554221 1110
Q ss_pred --------hhhhhhccCCCcEEEEeccChH---Hhhccc----cccceecc---CCh-hHHHHHHHhCCcEeccCCccch
Q 012412 324 --------KKFSDETLTSHKSLVVSWCPQL---EVLAHE----ATGCFVTH---CGW-NSTMEALSLGVPMVAMPQWSDQ 384 (464)
Q Consensus 324 --------~~~~~~~~~~~nv~~~~~~p~~---~ll~~~----~~~~vI~H---gG~-~s~~eal~~GvP~v~~P~~~DQ 384 (464)
..+.+++.+.++|.+.+++++. .++..+ ++ ||.- =|+ .++.||+++|+|+|+...
T Consensus 530 ~~~~l~~L~~li~~lgL~g~V~FlG~v~~edvp~lYr~Ad~s~DV--FV~PS~~EgFGLvlLEAMAcGlPVVASdv---- 603 (1050)
T TIGR02468 530 SSSVLTSVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGV--FINPAFIEPFGLTLIEAAAHGLPMVATKN---- 603 (1050)
T ss_pred chHHHHHHHHHHHHhCCCCeEEecCCCCHHHHHHHHHHhhhcCCe--eeCCcccCCCCHHHHHHHHhCCCEEEeCC----
Confidence 1122333356889999999876 556655 46 7753 354 478999999999998764
Q ss_pred hhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcCCc-hHHHHHHHHH
Q 012412 385 STNAKYILDVWKTGLKFPIVKRDAIADCISEILEGER-GKELRRNAGK 431 (464)
Q Consensus 385 ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~~~-~~~~~~~a~~ 431 (464)
......++.. ..|+.++..++++|+++|.+++.|++ .+++.+++.+
T Consensus 604 GG~~EII~~g-~nGlLVdP~D~eaLA~AL~~LL~Dpelr~~m~~~gr~ 650 (1050)
T TIGR02468 604 GGPVDIHRVL-DNGLLVDPHDQQAIADALLKLVADKQLWAECRQNGLK 650 (1050)
T ss_pred CCcHHHhccC-CcEEEECCCCHHHHHHHHHHHhhCHHHHHHHHHHHHH
Confidence 3344555566 67888876789999999999999863 1334444443
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.37 E-value=9.7e-14 Score=115.67 Aligned_cols=121 Identities=21% Similarity=0.318 Sum_probs=80.9
Q ss_pred EEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEccCCCCCCCCCCccCHHHHHHHHHHh
Q 012412 16 CLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGYAQAESIEAYLERFWQI 95 (464)
Q Consensus 16 il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (464)
|+|++.|+.||++|+++||++|++|||+|++++++.+.+.+. ..|+.|.+++.. . ...........+..+...
T Consensus 1 Ili~~~Gt~Ghv~P~lala~~L~~rGh~V~~~~~~~~~~~v~----~~Gl~~~~~~~~--~-~~~~~~~~~~~~~~~~~~ 73 (139)
T PF03033_consen 1 ILIATGGTRGHVYPFLALARALRRRGHEVRLATPPDFRERVE----AAGLEFVPIPGD--S-RLPRSLEPLANLRRLARL 73 (139)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHTT-EEEEEETGGGHHHHH----HTT-EEEESSSC--G-GGGHHHHHHHHHHCHHHH
T ss_pred CEEEEcCChhHHHHHHHHHHHHhccCCeEEEeecccceeccc----ccCceEEEecCC--c-CcCcccchhhhhhhHHHH
Confidence 789999999999999999999999999999999999999998 889999999854 1 111110111111111111
Q ss_pred --CcHHHHHHHHHh----c----CCCCCccEEEeCCchhhHHHHHHHcCCccEEEecch
Q 012412 96 --GPQTLTELVEKM----N----GSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQS 144 (464)
Q Consensus 96 --~~~~l~~~~~~l----~----~~~~p~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~ 144 (464)
....+.+.+++. . .... .|+++.+.....+..+|+++|||++.....+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~vaE~~~iP~~~~~~~p 131 (139)
T PF03033_consen 74 IRGLEEAMRILARFRPDLVVAAGGYVA-DDVIIAAPLAFAAALVAEQLGIPGVANRLFP 131 (139)
T ss_dssp HHHHHHHHHHHHHHHHCCCCHCTTTTE-CCEECHHHHHTHHHHHHHHHTS-EEEEESSG
T ss_pred hhhhhHHHHHhhccCcchhhhccCccc-chHHHhhhhcCccceeEhhhCchHHHHhhCC
Confidence 111122222221 1 1112 3888889888889999999999999876655
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B .... |
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.35 E-value=4e-09 Score=104.58 Aligned_cols=331 Identities=17% Similarity=0.128 Sum_probs=167.4
Q ss_pred CccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEccCCCCCCCCCCccCHHHHHHHHHHhCcHHHHH
Q 012412 23 GQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGYAQAESIEAYLERFWQIGPQTLTE 102 (464)
Q Consensus 23 ~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 102 (464)
..|--.-...||++|.++||+|+++++..............++.++.++..... .. ........+.......++.
T Consensus 19 ~GG~e~~v~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~ 93 (405)
T TIGR03449 19 AGGMNVYILETATELARRGIEVDIFTRATRPSQPPVVEVAPGVRVRNVVAGPYE-GL----DKEDLPTQLCAFTGGVLRA 93 (405)
T ss_pred CCCceehHHHHHHHHhhCCCEEEEEecccCCCCCCccccCCCcEEEEecCCCcc-cC----CHHHHHHHHHHHHHHHHHH
Confidence 357778899999999999999999997533211110012357777777532111 11 1111111111111112223
Q ss_pred HHHHhcCCCCCccEEEeCCch--hhHHHHHHHcCCccEEEecchHHHHHHHhhhhcCcccCCCCCCceeCCCCCCCCCCC
Q 012412 103 LVEKMNGSDSPVDCIVYDSIL--LWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNEILLPGMPPLEPQD 180 (464)
Q Consensus 103 ~~~~l~~~~~p~DlVI~D~~~--~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~p~~p~~~~~~ 180 (464)
.++... .++|+|.+.... ..+..+++.+++|+|.......... ...+ ....
T Consensus 94 ~~~~~~---~~~Diih~h~~~~~~~~~~~~~~~~~p~v~t~h~~~~~~---~~~~---------------------~~~~ 146 (405)
T TIGR03449 94 EARHEP---GYYDLIHSHYWLSGQVGWLLRDRWGVPLVHTAHTLAAVK---NAAL---------------------ADGD 146 (405)
T ss_pred HhhccC---CCCCeEEechHHHHHHHHHHHHhcCCCEEEeccchHHHH---HHhc---------------------cCCC
Confidence 333221 235999887543 3456667889999876544331100 0000 0000
Q ss_pred CCCccccCCCCchHHHHHHHHHhhhccCCcEEEecchhhhhHHHHHHHHhc-CCeeeecccCCCccccccccCccccccc
Q 012412 181 MPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKT-WSLRTIGPTIPSFYLDKQIEDDKDYGFS 259 (464)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~-~~~~~vgp~~~~~~~~~~~~~~~~~~~~ 259 (464)
.. ......+.. ...+..++.+++.|....+. ........ .++..|..-+.. .
T Consensus 147 ~~--------~~~~~~~~e---~~~~~~~d~vi~~s~~~~~~-~~~~~~~~~~ki~vi~ngvd~---------------~ 199 (405)
T TIGR03449 147 TP--------EPEARRIGE---QQLVDNADRLIANTDEEARD-LVRHYDADPDRIDVVAPGADL---------------E 199 (405)
T ss_pred CC--------chHHHHHHH---HHHHHhcCeEEECCHHHHHH-HHHHcCCChhhEEEECCCcCH---------------H
Confidence 00 000111111 11236677888888654432 11111100 012222211100 0
Q ss_pred cccc-chhHHHHHhhcCCCCceEEEEecccccC-CHHHHHHHH-HHHhhC-C--CeEEEEEcCcccC-cCChhh---hhh
Q 012412 260 MFKS-STEACMKWLNDRAKESVVYVSYGSFVEL-KAEEMEELA-WGLKSS-D--QHFLWVVRESEQA-KLPKKF---SDE 329 (464)
Q Consensus 260 ~~~~-~~~~~~~~l~~~~~~~~v~vs~Gs~~~~-~~~~~~~~~-~al~~~-~--~~~i~~~~~~~~~-~~~~~~---~~~ 329 (464)
.+.+ ........++. ++++.+++.+|++... ..+.+-..+ ...++. + ..++++.+..... ...+++ .+.
T Consensus 200 ~~~~~~~~~~~~~~~~-~~~~~~i~~~G~l~~~K~~~~li~a~~~l~~~~~~~~~~l~ivG~~~~~g~~~~~~l~~~~~~ 278 (405)
T TIGR03449 200 RFRPGDRATERARLGL-PLDTKVVAFVGRIQPLKAPDVLLRAVAELLDRDPDRNLRVIVVGGPSGSGLATPDALIELAAE 278 (405)
T ss_pred HcCCCcHHHHHHhcCC-CCCCcEEEEecCCCcccCHHHHHHHHHHHHhhCCCcceEEEEEeCCCCCcchHHHHHHHHHHH
Confidence 0111 11222222222 2334677888887622 223322222 222322 2 3444433211111 111222 222
Q ss_pred ccCCCcEEEEeccChH---Hhhccccccceec---cCC-hhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeecc
Q 012412 330 TLTSHKSLVVSWCPQL---EVLAHEATGCFVT---HCG-WNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP 402 (464)
Q Consensus 330 ~~~~~nv~~~~~~p~~---~ll~~~~~~~vI~---HgG-~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~ 402 (464)
....+||.+.+++|.. +++..+|+ +|. +.| ..++.||+++|+|+|+... ......+++. +.|...+
T Consensus 279 ~~l~~~v~~~g~~~~~~~~~~l~~ad~--~v~ps~~E~~g~~~lEAma~G~Pvi~~~~----~~~~e~i~~~-~~g~~~~ 351 (405)
T TIGR03449 279 LGIADRVRFLPPRPPEELVHVYRAADV--VAVPSYNESFGLVAMEAQACGTPVVAARV----GGLPVAVADG-ETGLLVD 351 (405)
T ss_pred cCCCceEEECCCCCHHHHHHHHHhCCE--EEECCCCCCcChHHHHHHHcCCCEEEecC----CCcHhhhccC-CceEECC
Confidence 2245789999999865 78999999 763 234 3589999999999998653 3455566677 7788877
Q ss_pred CcCHHHHHHHHHHHhcCC
Q 012412 403 IVKRDAIADCISEILEGE 420 (464)
Q Consensus 403 ~~~~~~l~~~i~~ll~~~ 420 (464)
.-+.++++++|.++++++
T Consensus 352 ~~d~~~la~~i~~~l~~~ 369 (405)
T TIGR03449 352 GHDPADWADALARLLDDP 369 (405)
T ss_pred CCCHHHHHHHHHHHHhCH
Confidence 668999999999999886
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. |
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.2e-09 Score=106.25 Aligned_cols=135 Identities=18% Similarity=0.270 Sum_probs=86.9
Q ss_pred CCceEEEEeccccc-CCHHHHHHHHHHHhh--CCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChH---Hhhcc
Q 012412 277 KESVVYVSYGSFVE-LKAEEMEELAWGLKS--SDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQL---EVLAH 350 (464)
Q Consensus 277 ~~~~v~vs~Gs~~~-~~~~~~~~~~~al~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~---~ll~~ 350 (464)
+++.+++..|+... -..+.+-.++..+.+ .+.++++...+.....+ .+..+.....+|+.+.+++|+. .++..
T Consensus 200 ~~~~~i~~~G~~~~~k~~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~-~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ 278 (374)
T cd03817 200 EDEPVLLYVGRLAKEKNIDFLIRAFARLLKEEPDVKLVIVGDGPEREEL-EELARELGLADRVIFTGFVPREELPDYYKA 278 (374)
T ss_pred CCCeEEEEEeeeecccCHHHHHHHHHHHHHhCCCeEEEEEeCCchHHHH-HHHHHHcCCCCcEEEeccCChHHHHHHHHH
Confidence 34567777887652 233333333333333 34555554433221111 1222222256899999999976 67889
Q ss_pred ccccceecc----CChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcCC
Q 012412 351 EATGCFVTH----CGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGE 420 (464)
Q Consensus 351 ~~~~~vI~H----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~~ 420 (464)
+++ +|.. |...++.||+++|+|+|+.. ....+..+++. +.|..++..+. ++.+++.++++++
T Consensus 279 ad~--~l~~s~~e~~~~~~~Ea~~~g~PvI~~~----~~~~~~~i~~~-~~g~~~~~~~~-~~~~~i~~l~~~~ 344 (374)
T cd03817 279 ADL--FVFASTTETQGLVLLEAMAAGLPVVAVD----APGLPDLVADG-ENGFLFPPGDE-ALAEALLRLLQDP 344 (374)
T ss_pred cCE--EEecccccCcChHHHHHHHcCCcEEEeC----CCChhhheecC-ceeEEeCCCCH-HHHHHHHHHHhCh
Confidence 999 7733 33478999999999999865 44567777887 78888873333 8999999999886
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. |
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Probab=99.33 E-value=2.9e-09 Score=103.01 Aligned_cols=134 Identities=21% Similarity=0.257 Sum_probs=88.0
Q ss_pred CCceEEEEecccccCCHHHHHHHHHHHhhC-----CCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChH---Hhh
Q 012412 277 KESVVYVSYGSFVELKAEEMEELAWGLKSS-----DQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQL---EVL 348 (464)
Q Consensus 277 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~---~ll 348 (464)
.++.+++.+|+.. ..+....+++++..+ +.++++...+.....+ ....+....++++.+.+++++. .++
T Consensus 197 ~~~~~i~~~g~~~--~~k~~~~~i~~~~~~~~~~~~~~l~i~G~~~~~~~~-~~~~~~~~~~~~v~~~g~~~~~~~~~~~ 273 (374)
T cd03801 197 EDEPVILFVGRLV--PRKGVDLLLEALAKLRKEYPDVRLVIVGDGPLREEL-EALAAELGLGDRVTFLGFVPDEDLPALY 273 (374)
T ss_pred CCCeEEEEecchh--hhcCHHHHHHHHHHHhhhcCCeEEEEEeCcHHHHHH-HHHHHHhCCCcceEEEeccChhhHHHHH
Confidence 3446778888765 223333444444332 2444444322211111 1111112256899999999754 789
Q ss_pred ccccccceec----cCChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcCC
Q 012412 349 AHEATGCFVT----HCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGE 420 (464)
Q Consensus 349 ~~~~~~~vI~----HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~~ 420 (464)
..+++ +|. -|..+++.||+++|+|+|+.+. ......+++. +.|...+..+.+++.+++.+++.|+
T Consensus 274 ~~~di--~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~----~~~~~~~~~~-~~g~~~~~~~~~~l~~~i~~~~~~~ 342 (374)
T cd03801 274 AAADV--FVLPSLYEGFGLVLLEAMAAGLPVVASDV----GGIPEVVEDG-ETGLLVPPGDPEALAEAILRLLDDP 342 (374)
T ss_pred HhcCE--EEecchhccccchHHHHHHcCCcEEEeCC----CChhHHhcCC-cceEEeCCCCHHHHHHHHHHHHcCh
Confidence 99999 773 3456789999999999998664 5567777777 8888888667999999999999886
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. |
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Probab=99.32 E-value=7.5e-09 Score=103.49 Aligned_cols=133 Identities=17% Similarity=0.173 Sum_probs=85.8
Q ss_pred ceEEEEecccccCCHHHHHHHHHHHhhC-----CCeEEEEEcCccc-CcCCh----------hhhhhccCCCcEEEEecc
Q 012412 279 SVVYVSYGSFVELKAEEMEELAWGLKSS-----DQHFLWVVRESEQ-AKLPK----------KFSDETLTSHKSLVVSWC 342 (464)
Q Consensus 279 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~-~~~~~----------~~~~~~~~~~nv~~~~~~ 342 (464)
..++++.|.+. +.+-+..+++|++.+ ...++++.|+... ..+.. ++.+++...++|.+.+++
T Consensus 248 ~~~i~~vGrl~--~~Kg~~~li~A~~~l~~~~~~~~l~li~G~g~~~~~l~~~~~~~~~~~~~~~~~~~l~~~V~f~g~~ 325 (439)
T TIGR02472 248 KPPILAISRPD--RRKNIPSLVEAYGRSPKLQEMANLVLVLGCRDDIRKMESQQREVLQKVLLLIDRYDLYGKVAYPKHH 325 (439)
T ss_pred CcEEEEEcCCc--ccCCHHHHHHHHHhChhhhhhccEEEEeCCccccccccHHHHHHHHHHHHHHHHcCCCceEEecCCC
Confidence 35777778775 334455555555431 2344444454321 11111 112333356889999988
Q ss_pred ChH---Hhhccc----cccceeccC---C-hhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHH
Q 012412 343 PQL---EVLAHE----ATGCFVTHC---G-WNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIAD 411 (464)
Q Consensus 343 p~~---~ll~~~----~~~~vI~Hg---G-~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~ 411 (464)
++. .++..+ |+ ||... | ..++.||+++|+|+|+... ......+++. ..|..++.-++++|++
T Consensus 326 ~~~~~~~~~~~a~~~~Dv--~v~pS~~E~fg~~~lEAma~G~PvV~s~~----gg~~eiv~~~-~~G~lv~~~d~~~la~ 398 (439)
T TIGR02472 326 RPDDVPELYRLAARSRGI--FVNPALTEPFGLTLLEAAACGLPIVATDD----GGPRDIIANC-RNGLLVDVLDLEAIAS 398 (439)
T ss_pred CHHHHHHHHHHHhhcCCE--EecccccCCcccHHHHHHHhCCCEEEeCC----CCcHHHhcCC-CcEEEeCCCCHHHHHH
Confidence 866 446655 67 77543 4 3589999999999997653 4466666666 6788887678999999
Q ss_pred HHHHHhcCC
Q 012412 412 CISEILEGE 420 (464)
Q Consensus 412 ~i~~ll~~~ 420 (464)
+|.++++|+
T Consensus 399 ~i~~ll~~~ 407 (439)
T TIGR02472 399 ALEDALSDS 407 (439)
T ss_pred HHHHHHhCH
Confidence 999999986
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. |
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.31 E-value=3.9e-09 Score=104.06 Aligned_cols=81 Identities=12% Similarity=0.170 Sum_probs=62.6
Q ss_pred CCCcEEEEeccChH---Hhhccccccceecc---CC-hhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCc
Q 012412 332 TSHKSLVVSWCPQL---EVLAHEATGCFVTH---CG-WNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIV 404 (464)
Q Consensus 332 ~~~nv~~~~~~p~~---~ll~~~~~~~vI~H---gG-~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~ 404 (464)
..+||.+.+++|.. .++..+++ ++.. -| ..++.||+++|+|+|+.-. ......+.+. +.|...+.
T Consensus 278 l~~~V~f~g~~~~~~~~~~l~~ad~--~l~~s~~E~~g~~~lEAma~G~PvI~s~~----~~~~e~i~~~-~~g~~~~~- 349 (392)
T cd03805 278 LEDQVIFLPSISDSQKELLLSSARA--LLYTPSNEHFGIVPLEAMYAGKPVIACNS----GGPLETVVDG-ETGFLCEP- 349 (392)
T ss_pred CCceEEEeCCCChHHHHHHHhhCeE--EEECCCcCCCCchHHHHHHcCCCEEEECC----CCcHHHhccC-CceEEeCC-
Confidence 56899999999976 67889998 6632 22 3578999999999998643 3344556666 67877664
Q ss_pred CHHHHHHHHHHHhcCC
Q 012412 405 KRDAIADCISEILEGE 420 (464)
Q Consensus 405 ~~~~l~~~i~~ll~~~ 420 (464)
+.++++++|.++++++
T Consensus 350 ~~~~~a~~i~~l~~~~ 365 (392)
T cd03805 350 TPEEFAEAMLKLANDP 365 (392)
T ss_pred CHHHHHHHHHHHHhCh
Confidence 7999999999999986
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. |
| >PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.9e-09 Score=107.49 Aligned_cols=81 Identities=15% Similarity=0.213 Sum_probs=63.5
Q ss_pred cEEEEeccChH-Hhhccccccceecc-----CChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHH
Q 012412 335 KSLVVSWCPQL-EVLAHEATGCFVTH-----CGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDA 408 (464)
Q Consensus 335 nv~~~~~~p~~-~ll~~~~~~~vI~H-----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~ 408 (464)
++.+.+..... .+++.+|+ ++.. +|..++.||+++|+|+|+-|...++......+.+. |+++.. -+.++
T Consensus 303 ~v~l~~~~~el~~~y~~aDi--~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~~-g~~~~~--~d~~~ 377 (425)
T PRK05749 303 DVLLGDTMGELGLLYAIADI--AFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERLLQA-GAAIQV--EDAED 377 (425)
T ss_pred cEEEEecHHHHHHHHHhCCE--EEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHHHHC-CCeEEE--CCHHH
Confidence 45566655444 88899998 5432 34446899999999999999888888888888788 877664 47899
Q ss_pred HHHHHHHHhcCC
Q 012412 409 IADCISEILEGE 420 (464)
Q Consensus 409 l~~~i~~ll~~~ 420 (464)
|.+++.++++|+
T Consensus 378 La~~l~~ll~~~ 389 (425)
T PRK05749 378 LAKAVTYLLTDP 389 (425)
T ss_pred HHHHHHHHhcCH
Confidence 999999999986
|
|
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.27 E-value=6.1e-09 Score=100.02 Aligned_cols=135 Identities=19% Similarity=0.251 Sum_probs=82.8
Q ss_pred CceEEEEeccccc-CCHHHHHHHHHHHhh--CCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChH-Hhhccccc
Q 012412 278 ESVVYVSYGSFVE-LKAEEMEELAWGLKS--SDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQL-EVLAHEAT 353 (464)
Q Consensus 278 ~~~v~vs~Gs~~~-~~~~~~~~~~~al~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~-~ll~~~~~ 353 (464)
+..+++.+|+... -..+.+-.++..+.+ .+.++++...+.....+ .+..+.....+++.+.++.... .++..+++
T Consensus 177 ~~~~i~~~g~~~~~K~~~~l~~~~~~l~~~~~~~~l~i~G~~~~~~~~-~~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~ 255 (348)
T cd03820 177 KSKRILAVGRLVPQKGFDLLIEAWAKIAKKHPDWKLRIVGDGPEREAL-EALIKELGLEDRVILLGFTKNIEEYYAKASI 255 (348)
T ss_pred CCcEEEEEEeeccccCHHHHHHHHHHHHhcCCCeEEEEEeCCCCHHHH-HHHHHHcCCCCeEEEcCCcchHHHHHHhCCE
Confidence 3456777777653 233333333444432 23455444322211111 1122222256788888884433 89999999
Q ss_pred cceeccCC----hhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhc-ceeeccCcCHHHHHHHHHHHhcCC
Q 012412 354 GCFVTHCG----WNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWK-TGLKFPIVKRDAIADCISEILEGE 420 (464)
Q Consensus 354 ~~vI~HgG----~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G-~g~~l~~~~~~~l~~~i~~ll~~~ 420 (464)
+|.-.. ..++.||+++|+|+|+.+....+ ..+... | .|...+..+.+++.+++.+++.|+
T Consensus 256 --~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~----~~~~~~-~~~g~~~~~~~~~~~~~~i~~ll~~~ 320 (348)
T cd03820 256 --FVLTSRFEGFPMVLLEAMAFGLPVISFDCPTGP----SEIIED-GVNGLLVPNGDVEALAEALLRLMEDE 320 (348)
T ss_pred --EEeCccccccCHHHHHHHHcCCCEEEecCCCch----Hhhhcc-CcceEEeCCCCHHHHHHHHHHHHcCH
Confidence 775542 46899999999999986644332 234444 5 788777678899999999999987
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. |
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.25 E-value=2.5e-08 Score=97.06 Aligned_cols=82 Identities=18% Similarity=0.128 Sum_probs=63.6
Q ss_pred CCCcEEEEeccC-hH---HhhccccccceeccC----ChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccC
Q 012412 332 TSHKSLVVSWCP-QL---EVLAHEATGCFVTHC----GWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPI 403 (464)
Q Consensus 332 ~~~nv~~~~~~p-~~---~ll~~~~~~~vI~Hg----G~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~ 403 (464)
...++.+.+|++ +. .++..+++ +|.-. ...++.||+++|+|+|+... ......+.+. +.|..++.
T Consensus 242 ~~~~v~~~g~~~~~~~~~~~~~~ad~--~l~ps~~e~~g~~~~Eam~~g~PvI~~~~----~~~~e~~~~~-~~g~~~~~ 314 (365)
T cd03825 242 LPFPVHYLGSLNDDESLALIYSAADV--FVVPSLQENFPNTAIEALACGTPVVAFDV----GGIPDIVDHG-VTGYLAKP 314 (365)
T ss_pred CCCceEecCCcCCHHHHHHHHHhCCE--EEeccccccccHHHHHHHhcCCCEEEecC----CCChhheeCC-CceEEeCC
Confidence 457889999998 43 67999999 87643 35789999999999997653 3344455555 67777776
Q ss_pred cCHHHHHHHHHHHhcCC
Q 012412 404 VKRDAIADCISEILEGE 420 (464)
Q Consensus 404 ~~~~~l~~~i~~ll~~~ 420 (464)
.+.+++.+++.++++|+
T Consensus 315 ~~~~~~~~~l~~l~~~~ 331 (365)
T cd03825 315 GDPEDLAEGIEWLLADP 331 (365)
T ss_pred CCHHHHHHHHHHHHhCH
Confidence 68999999999999886
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. |
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.3e-08 Score=98.67 Aligned_cols=135 Identities=17% Similarity=0.171 Sum_probs=88.5
Q ss_pred CceEEEEecccccCCHHHHHHHHHHHhhCC-CeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChH---Hhhccccc
Q 012412 278 ESVVYVSYGSFVELKAEEMEELAWGLKSSD-QHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQL---EVLAHEAT 353 (464)
Q Consensus 278 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~---~ll~~~~~ 353 (464)
++.+++..|+.. ..+-...++++++++. .++++...+.....+. ++.++....+||.+.+|+|+. .++..+++
T Consensus 190 ~~~~i~~~G~~~--~~K~~~~li~a~~~l~~~~l~i~G~g~~~~~~~-~~~~~~~~~~~V~~~g~v~~~~~~~~~~~ad~ 266 (357)
T cd03795 190 GRPFFLFVGRLV--YYKGLDVLLEAAAALPDAPLVIVGEGPLEAELE-ALAAALGLLDRVRFLGRLDDEEKAALLAACDV 266 (357)
T ss_pred CCcEEEEecccc--cccCHHHHHHHHHhccCcEEEEEeCChhHHHHH-HHHHhcCCcceEEEcCCCCHHHHHHHHHhCCE
Confidence 446778888875 3344555667776665 5555554332211111 111122256899999999975 68888999
Q ss_pred cceec---cCCh-hHHHHHHHhCCcEeccCCccchhhHHHHHHh-HhcceeeccCcCHHHHHHHHHHHhcCC
Q 012412 354 GCFVT---HCGW-NSTMEALSLGVPMVAMPQWSDQSTNAKYILD-VWKTGLKFPIVKRDAIADCISEILEGE 420 (464)
Q Consensus 354 ~~vI~---HgG~-~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~-~~G~g~~l~~~~~~~l~~~i~~ll~~~ 420 (464)
.++.+ +.|+ .++.||+++|+|+|+....... ..+.. . +.|...+..+.+++.++|.++++|+
T Consensus 267 ~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~----~~i~~~~-~~g~~~~~~d~~~~~~~i~~l~~~~ 333 (357)
T cd03795 267 FVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGG----SYVNLHG-VTGLVVPPGDPAALAEAIRRLLEDP 333 (357)
T ss_pred EEeCCcccccccchHHHHHHHcCCCEEecCCCCch----hHHhhCC-CceEEeCCCCHHHHHHHHHHHHHCH
Confidence 33323 2344 4789999999999986544433 34443 6 7788777668999999999999986
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.23 E-value=1.8e-08 Score=99.61 Aligned_cols=134 Identities=12% Similarity=0.108 Sum_probs=79.8
Q ss_pred CCceEEEEeccccc-CCHHHHHHHHHHHh-h-CCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChH---Hhhcc
Q 012412 277 KESVVYVSYGSFVE-LKAEEMEELAWGLK-S-SDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQL---EVLAH 350 (464)
Q Consensus 277 ~~~~v~vs~Gs~~~-~~~~~~~~~~~al~-~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~---~ll~~ 350 (464)
++..+++..|.... -..+.+-..+..+. + .+.+++++..+.....+ .+..++....++|.+.+|+|+. .+++.
T Consensus 191 ~~~~~i~~~grl~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~l-~~~~~~~~l~~~v~~~G~~~~~~~~~~l~~ 269 (398)
T cd03796 191 NDKITIVVISRLVYRKGIDLLVGIIPEICKKHPNVRFIIGGDGPKRILL-EEMREKYNLQDRVELLGAVPHERVRDVLVQ 269 (398)
T ss_pred CCceEEEEEeccchhcCHHHHHHHHHHHHhhCCCEEEEEEeCCchHHHH-HHHHHHhCCCCeEEEeCCCCHHHHHHHHHh
Confidence 34568888887752 22333333333333 2 23454444333211111 2222333356789999999865 78889
Q ss_pred ccccceec---cCChh-HHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcCC
Q 012412 351 EATGCFVT---HCGWN-STMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGE 420 (464)
Q Consensus 351 ~~~~~vI~---HgG~~-s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~~ 420 (464)
+|+ +|. +-|+| ++.||+++|+|+|+.+..+ ....+.+ |.+.. ...+.+++.+++.+++++.
T Consensus 270 ad~--~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg----~~e~i~~--~~~~~-~~~~~~~l~~~l~~~l~~~ 334 (398)
T cd03796 270 GHI--FLNTSLTEAFCIAIVEAASCGLLVVSTRVGG----IPEVLPP--DMILL-AEPDVESIVRKLEEAISIL 334 (398)
T ss_pred CCE--EEeCChhhccCHHHHHHHHcCCCEEECCCCC----chhheeC--Cceee-cCCCHHHHHHHHHHHHhCh
Confidence 999 663 22443 8999999999999876542 3334433 33322 2237899999999999864
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. |
| >TIGR02470 sucr_synth sucrose synthase | Back alignment and domain information |
|---|
Probab=99.21 E-value=6e-08 Score=100.59 Aligned_cols=129 Identities=15% Similarity=0.150 Sum_probs=79.4
Q ss_pred eEEEEecccccCCHHHHHHHHHHHhhC-----CCeEEEEEcCccc--CcCCh---------hhhhhccCCCcEEEEecc-
Q 012412 280 VVYVSYGSFVELKAEEMEELAWGLKSS-----DQHFLWVVRESEQ--AKLPK---------KFSDETLTSHKSLVVSWC- 342 (464)
Q Consensus 280 ~v~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~--~~~~~---------~~~~~~~~~~nv~~~~~~- 342 (464)
.++++.|... +.+-+..+++++.+. +.+++++.++... ....+ ++.+++.+.++|.+.++.
T Consensus 551 piIl~VGRL~--~~KGid~LIeA~~~l~~l~~~~~LVIVGGg~~~~~s~d~ee~~~i~~L~~la~~~gL~g~V~flG~~~ 628 (784)
T TIGR02470 551 PIIFSMARLD--RVKNLTGLVECYGRSPKLRELVNLVVVAGKLDAKESKDREEQAEIEKMHNLIDQYQLHGQIRWIGAQL 628 (784)
T ss_pred cEEEEEeCCC--ccCCHHHHHHHHHHhHhhCCCeEEEEEeCCcccccccchhHHHHHHHHHHHHHHhCCCCeEEEccCcC
Confidence 4667777765 334455566665432 2455544433210 00111 122333356889988875
Q ss_pred Ch---HHhhc----cccccceec---cCCh-hHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHH
Q 012412 343 PQ---LEVLA----HEATGCFVT---HCGW-NSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIAD 411 (464)
Q Consensus 343 p~---~~ll~----~~~~~~vI~---HgG~-~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~ 411 (464)
+. .+++. .+++ ||. .=|+ -++.||+++|+|+|+.. ....+..+++. ..|..++..+++++++
T Consensus 629 ~~~~~~elyr~iAd~adV--fV~PS~~EpFGLvvLEAMAcGlPVVAT~----~GG~~EiV~dg-~tGfLVdp~D~eaLA~ 701 (784)
T TIGR02470 629 NRVRNGELYRYIADTKGI--FVQPALYEAFGLTVLEAMTCGLPTFATR----FGGPLEIIQDG-VSGFHIDPYHGEEAAE 701 (784)
T ss_pred CcccHHHHHHHhhccCcE--EEECCcccCCCHHHHHHHHcCCCEEEcC----CCCHHHHhcCC-CcEEEeCCCCHHHHHH
Confidence 32 24443 2346 663 3344 48899999999999754 45677778777 8899998668899999
Q ss_pred HHHHHh
Q 012412 412 CISEIL 417 (464)
Q Consensus 412 ~i~~ll 417 (464)
+|.+++
T Consensus 702 aL~~ll 707 (784)
T TIGR02470 702 KIVDFF 707 (784)
T ss_pred HHHHHH
Confidence 999876
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria. |
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.9e-08 Score=98.11 Aligned_cols=82 Identities=22% Similarity=0.224 Sum_probs=66.7
Q ss_pred CCCcEEEEeccChH---Hhhccccccceecc----------CChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcce
Q 012412 332 TSHKSLVVSWCPQL---EVLAHEATGCFVTH----------CGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTG 398 (464)
Q Consensus 332 ~~~nv~~~~~~p~~---~ll~~~~~~~vI~H----------gG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g 398 (464)
..+++.+.+++|+. .++..+++ +|.- |-.+++.||+++|+|+|+.+.. .++..+.+. +.|
T Consensus 243 ~~~~v~~~g~~~~~~l~~~~~~ad~--~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~----~~~e~i~~~-~~g 315 (367)
T cd05844 243 LGGRVTFLGAQPHAEVRELMRRARI--FLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHG----GIPEAVEDG-ETG 315 (367)
T ss_pred CCCeEEECCCCCHHHHHHHHHhCCE--EEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCC----CchhheecC-Cee
Confidence 46889999999875 66889999 6632 2357899999999999987653 467777777 888
Q ss_pred eeccCcCHHHHHHHHHHHhcCC
Q 012412 399 LKFPIVKRDAIADCISEILEGE 420 (464)
Q Consensus 399 ~~l~~~~~~~l~~~i~~ll~~~ 420 (464)
..++..+.+++.++|.++++|+
T Consensus 316 ~~~~~~d~~~l~~~i~~l~~~~ 337 (367)
T cd05844 316 LLVPEGDVAALAAALGRLLADP 337 (367)
T ss_pred EEECCCCHHHHHHHHHHHHcCH
Confidence 8887678899999999999986
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.19 E-value=7.9e-08 Score=93.19 Aligned_cols=137 Identities=19% Similarity=0.178 Sum_probs=87.1
Q ss_pred CCceEEEEeccccc-CCHHHHHHHHHHHhhCCCeEEEEEcCcc-cCcCChhhhhhccCCCcEEEEeccChH---Hhhccc
Q 012412 277 KESVVYVSYGSFVE-LKAEEMEELAWGLKSSDQHFLWVVRESE-QAKLPKKFSDETLTSHKSLVVSWCPQL---EVLAHE 351 (464)
Q Consensus 277 ~~~~v~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~nv~~~~~~p~~---~ll~~~ 351 (464)
.++.+++..|+... -..+.+-..+..+.+.+..+.+.+.+.. ....-.+..+.....+|+.+.+++++. .++..+
T Consensus 200 ~~~~~i~~~g~~~~~k~~~~li~~~~~~~~~~~~~~l~i~g~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~a 279 (377)
T cd03798 200 EDKKVILFVGRLVPRKGIDYLIEALARLLKKRPDVHLVIVGDGPLREALEALAAELGLEDRVTFLGAVPHEEVPAYYAAA 279 (377)
T ss_pred CCceEEEEeccCccccCHHHHHHHHHHHHhcCCCeEEEEEcCCcchHHHHHHHHhcCCcceEEEeCCCCHHHHHHHHHhc
Confidence 34567788888653 2233333333333332223333332321 111111111112246899999999875 778899
Q ss_pred ccccee----ccCChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcCC
Q 012412 352 ATGCFV----THCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGE 420 (464)
Q Consensus 352 ~~~~vI----~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~~ 420 (464)
++ +| +-|..+++.||+++|+|+|+.+. ......+++. +.|...+..+.+++.+++.++++++
T Consensus 280 d~--~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~----~~~~~~~~~~-~~g~~~~~~~~~~l~~~i~~~~~~~ 345 (377)
T cd03798 280 DV--FVLPSLREGFGLVLLEAMACGLPVVATDV----GGIPEIITDG-ENGLLVPPGDPEALAEAILRLLADP 345 (377)
T ss_pred Ce--eecchhhccCChHHHHHHhcCCCEEEecC----CChHHHhcCC-cceeEECCCCHHHHHHHHHHHhcCc
Confidence 99 66 22456789999999999997653 4456667777 7788877778999999999999987
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. |
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.18 E-value=7.3e-08 Score=93.59 Aligned_cols=131 Identities=17% Similarity=0.135 Sum_probs=79.0
Q ss_pred CCceEEEEecccccCCHHHHHHHHHHHhh-----CCCeEEEEEcCcccCcCChhhh---hhccCCCcEEEEeccChH---
Q 012412 277 KESVVYVSYGSFVELKAEEMEELAWGLKS-----SDQHFLWVVRESEQAKLPKKFS---DETLTSHKSLVVSWCPQL--- 345 (464)
Q Consensus 277 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~-----~~~~~i~~~~~~~~~~~~~~~~---~~~~~~~nv~~~~~~p~~--- 345 (464)
.++.+++..|+... .+....++++++. .+.+++++ |... ......+. ......+++.+.+|+++.
T Consensus 201 ~~~~~i~~~G~~~~--~K~~~~li~a~~~l~~~~~~~~l~i~-G~~~-~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~ 276 (375)
T cd03821 201 PDKRIILFLGRLHP--KKGLDLLIEAFAKLAERFPDWHLVIA-GPDE-GGYRAELKQIAAALGLEDRVTFTGMLYGEDKA 276 (375)
T ss_pred CCCcEEEEEeCcch--hcCHHHHHHHHHHhhhhcCCeEEEEE-CCCC-cchHHHHHHHHHhcCccceEEEcCCCChHHHH
Confidence 34567788888752 2233334444433 23444433 3221 11111111 222256899999999955
Q ss_pred Hhhccccccceecc---CC-hhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcCC
Q 012412 346 EVLAHEATGCFVTH---CG-WNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGE 420 (464)
Q Consensus 346 ~ll~~~~~~~vI~H---gG-~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~~ 420 (464)
.++..+++ +|.- .| ..++.||+++|+|+|+.+.. .....+. . +.|...+ .+.+++.++|.++++++
T Consensus 277 ~~~~~adv--~v~ps~~e~~~~~~~Eama~G~PvI~~~~~----~~~~~~~-~-~~~~~~~-~~~~~~~~~i~~l~~~~ 346 (375)
T cd03821 277 AALADADL--FVLPSHSENFGIVVAEALACGTPVVTTDKV----PWQELIE-Y-GCGWVVD-DDVDALAAALRRALELP 346 (375)
T ss_pred HHHhhCCE--EEeccccCCCCcHHHHHHhcCCCEEEcCCC----CHHHHhh-c-CceEEeC-CChHHHHHHHHHHHhCH
Confidence 66889998 6532 23 46789999999999986633 3333332 3 5566655 34499999999999986
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. |
| >PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.2e-08 Score=99.49 Aligned_cols=149 Identities=16% Similarity=0.206 Sum_probs=92.7
Q ss_pred ceEEEEecccccCCHHHHHHHHHHHhhC--CCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccCh--H---Hhhccc
Q 012412 279 SVVYVSYGSFVELKAEEMEELAWGLKSS--DQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQ--L---EVLAHE 351 (464)
Q Consensus 279 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~--~---~ll~~~ 351 (464)
+.+++..|.......+.+..+++++... +.+++++-.+...+.+ .+..+.+..+++|.+.+|+++ . +.+..+
T Consensus 180 ~~~i~~~Grl~~~~~k~~~~l~~a~~~~~~~~~l~ivG~g~~~~~l-~~~~~~~~l~~~v~f~G~~~~~~~~~~~~~~~~ 258 (359)
T PRK09922 180 PAVFLYVGRLKFEGQKNVKELFDGLSQTTGEWQLHIIGDGSDFEKC-KAYSRELGIEQRIIWHGWQSQPWEVVQQKIKNV 258 (359)
T ss_pred CcEEEEEEEEecccCcCHHHHHHHHHhhCCCeEEEEEeCCccHHHH-HHHHHHcCCCCeEEEecccCCcHHHHHHHHhcC
Confidence 4567788876532334455666666654 3455544433222222 222233235689999999854 2 456678
Q ss_pred cccceec--c--CChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcCCc---hHH
Q 012412 352 ATGCFVT--H--CGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGER---GKE 424 (464)
Q Consensus 352 ~~~~vI~--H--gG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~~~---~~~ 424 (464)
++ +|. + |-..++.||+++|+|+|+.-. .......+++. ..|..++..+.+++.++|.++++|++ ...
T Consensus 259 d~--~v~~s~~Egf~~~~lEAma~G~Pvv~s~~---~~g~~eiv~~~-~~G~lv~~~d~~~la~~i~~l~~~~~~~~~~~ 332 (359)
T PRK09922 259 SA--LLLTSKFEGFPMTLLEAMSYGIPCISSDC---MSGPRDIIKPG-LNGELYTPGNIDEFVGKLNKVISGEVKYQHDA 332 (359)
T ss_pred cE--EEECCcccCcChHHHHHHHcCCCEEEeCC---CCChHHHccCC-CceEEECCCCHHHHHHHHHHHHhCcccCCHHH
Confidence 88 664 3 235789999999999997641 22233456666 67887776799999999999999874 133
Q ss_pred HHHHHHHHHH
Q 012412 425 LRRNAGKWRK 434 (464)
Q Consensus 425 ~~~~a~~l~~ 434 (464)
.+++++++..
T Consensus 333 ~~~~~~~~~~ 342 (359)
T PRK09922 333 IPNSIERFYE 342 (359)
T ss_pred HHHHHHHhhH
Confidence 4444444443
|
|
| >TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase | Back alignment and domain information |
|---|
Probab=99.16 E-value=3.4e-09 Score=103.49 Aligned_cols=138 Identities=13% Similarity=0.202 Sum_probs=87.7
Q ss_pred CceEEEEecccccCCHHHHHHHHHHHhhC-----CCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChH---Hhhc
Q 012412 278 ESVVYVSYGSFVELKAEEMEELAWGLKSS-----DQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQL---EVLA 349 (464)
Q Consensus 278 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~---~ll~ 349 (464)
++.|+++.+-.... .+.+..++++++++ +.++++..++.. ...+.+.+.....+|+++.+.+++. .++.
T Consensus 197 ~~~vl~~~hr~~~~-~k~~~~ll~a~~~l~~~~~~~~~vi~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~ 273 (365)
T TIGR00236 197 KRYILLTLHRRENV-GEPLENIFKAIREIVEEFEDVQIVYPVHLNP--VVREPLHKHLGDSKRVHLIEPLEYLDFLNLAA 273 (365)
T ss_pred CCEEEEecCchhhh-hhHHHHHHHHHHHHHHHCCCCEEEEECCCCh--HHHHHHHHHhCCCCCEEEECCCChHHHHHHHH
Confidence 34666655432211 14466677766553 456666544321 1112222222245789999877654 6778
Q ss_pred cccccceeccCChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcCCchHHHHHHH
Q 012412 350 HEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGERGKELRRNA 429 (464)
Q Consensus 350 ~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~~~~~~~~~~a 429 (464)
.+++ +|+..|.. +.||+++|+|+|.++...++.. +.+. |.+..+. .++++|.+++.++++|+ +.+++.
T Consensus 274 ~ad~--vv~~Sg~~-~~EA~a~g~PvI~~~~~~~~~e----~~~~-g~~~lv~-~d~~~i~~ai~~ll~~~---~~~~~~ 341 (365)
T TIGR00236 274 NSHL--ILTDSGGV-QEEAPSLGKPVLVLRDTTERPE----TVEA-GTNKLVG-TDKENITKAAKRLLTDP---DEYKKM 341 (365)
T ss_pred hCCE--EEECChhH-HHHHHHcCCCEEECCCCCCChH----HHhc-CceEEeC-CCHHHHHHHHHHHHhCh---HHHHHh
Confidence 9998 99877654 6999999999999875554442 3346 7666553 57999999999999886 555544
Q ss_pred H
Q 012412 430 G 430 (464)
Q Consensus 430 ~ 430 (464)
.
T Consensus 342 ~ 342 (365)
T TIGR00236 342 S 342 (365)
T ss_pred h
Confidence 3
|
Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other. |
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.9e-07 Score=90.66 Aligned_cols=81 Identities=22% Similarity=0.356 Sum_probs=63.3
Q ss_pred CCCcEEEEe-ccChH---Hhhccccccceec--c----CChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeec
Q 012412 332 TSHKSLVVS-WCPQL---EVLAHEATGCFVT--H----CGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKF 401 (464)
Q Consensus 332 ~~~nv~~~~-~~p~~---~ll~~~~~~~vI~--H----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l 401 (464)
..+||.+.+ |+|+. .++..+++ +|. . |..+++.||+++|+|+|+.+..+ ...+... +.|...
T Consensus 245 ~~~~v~~~~~~~~~~~~~~~~~~ad~--~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-----~~~i~~~-~~g~~~ 316 (366)
T cd03822 245 LADRVIFINRYLPDEELPELFSAADV--VVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-----AEEVLDG-GTGLLV 316 (366)
T ss_pred CCCcEEEecCcCCHHHHHHHHhhcCE--EEecccccccccchHHHHHHHcCCCEEecCCCC-----hheeeeC-CCcEEE
Confidence 568998885 58864 78899999 662 2 33568999999999999877543 3445666 778877
Q ss_pred cCcCHHHHHHHHHHHhcCC
Q 012412 402 PIVKRDAIADCISEILEGE 420 (464)
Q Consensus 402 ~~~~~~~l~~~i~~ll~~~ 420 (464)
+..+.+++.+++.++++|+
T Consensus 317 ~~~d~~~~~~~l~~l~~~~ 335 (366)
T cd03822 317 PPGDPAALAEAIRRLLADP 335 (366)
T ss_pred cCCCHHHHHHHHHHHHcCh
Confidence 7667999999999999985
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. |
| >PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length | Back alignment and domain information |
|---|
Probab=99.15 E-value=2.7e-08 Score=93.92 Aligned_cols=298 Identities=17% Similarity=0.168 Sum_probs=161.4
Q ss_pred cEEEE-EcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccc--cccccCCCCCCceEEEccCCCCCCCCCCccCHHHHHH
Q 012412 14 AHCLV-LTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFY--KSLHRDSSSSSIPLEAISDGYDEGGYAQAESIEAYLE 90 (464)
Q Consensus 14 ~~il~-~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 90 (464)
|||.| +..+. |+.-+..+.++|.++||+|.+.+.+... +.+. ..|+.+..++..- .+....+.
T Consensus 1 MkIwiDi~~p~--hvhfFk~~I~eL~~~GheV~it~R~~~~~~~LL~----~yg~~y~~iG~~g--------~~~~~Kl~ 66 (335)
T PF04007_consen 1 MKIWIDITHPA--HVHFFKNIIRELEKRGHEVLITARDKDETEELLD----LYGIDYIVIGKHG--------DSLYGKLL 66 (335)
T ss_pred CeEEEECCCch--HHHHHHHHHHHHHhCCCEEEEEEeccchHHHHHH----HcCCCeEEEcCCC--------CCHHHHHH
Confidence 57876 44444 9999999999999999999999976432 2333 6788888887432 12222222
Q ss_pred HHHHhCcHHHHHHHHHhcCCCCCccEEEeCCchhhHHHHHHHcCCccEEEecchHHHHHHHhhhhcCcccCCCCCCceeC
Q 012412 91 RFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNEILL 170 (464)
Q Consensus 91 ~~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 170 (464)
..... ...+.+.+.+ .+| |++|+- ....+..+|..+|+|+|.+.-+.-+.. . ..
T Consensus 67 ~~~~R----~~~l~~~~~~-~~p-Dv~is~-~s~~a~~va~~lgiP~I~f~D~e~a~~---~----~~------------ 120 (335)
T PF04007_consen 67 ESIER----QYKLLKLIKK-FKP-DVAISF-GSPEAARVAFGLGIPSIVFNDTEHAIA---Q----NR------------ 120 (335)
T ss_pred HHHHH----HHHHHHHHHh-hCC-CEEEec-CcHHHHHHHHHhCCCeEEEecCchhhc---c----ce------------
Confidence 22221 2222232222 255 999986 556688899999999999866541111 0 00
Q ss_pred CCCCCCCCCCCCCccccCCCCchHH-HHHHHHHhhhccCCcEEE-ecchhhhhHHHHHHHHhcCCeeeecccCCCccccc
Q 012412 171 PGMPPLEPQDMPSFIHDLGSYPAVS-YMMMKFQFENIDKADWVL-CNTFYELEEEVVEWLRKTWSLRTIGPTIPSFYLDK 248 (464)
Q Consensus 171 p~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l-~~s~~~l~~~~~~~~~~~~~~~~vgp~~~~~~~~~ 248 (464)
..+|... . -..+... .... ..+. .+ +.+. .+.+.|+ .++-|.
T Consensus 121 Lt~Pla~------~----i~~P~~~~~~~~-~~~G--~~-~~i~~y~G~~E~--------------ayl~~F-------- 164 (335)
T PF04007_consen 121 LTLPLAD------V----IITPEAIPKEFL-KRFG--AK-NQIRTYNGYKEL--------------AYLHPF-------- 164 (335)
T ss_pred eehhcCC------e----eECCcccCHHHH-HhcC--Cc-CCEEEECCeeeE--------------EeecCC--------
Confidence 0000000 0 0001000 1111 1111 11 1222 3333222 222222
Q ss_pred cccCcccccccccccchhHHHHHhhcCCCCceEEEEecccc----cCCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCCh
Q 012412 249 QIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFV----ELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPK 324 (464)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~----~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~ 324 (464)
.|+ ++..+-++. .+++.|++=+-+.. ......+..+++.+++.+.. |+.++... ...+
T Consensus 165 -------------~Pd-~~vl~~lg~-~~~~yIvvR~~~~~A~y~~~~~~i~~~ii~~L~~~~~~-vV~ipr~~--~~~~ 226 (335)
T PF04007_consen 165 -------------KPD-PEVLKELGL-DDEPYIVVRPEAWKASYDNGKKSILPEIIEELEKYGRN-VVIIPRYE--DQRE 226 (335)
T ss_pred -------------CCC-hhHHHHcCC-CCCCEEEEEeccccCeeecCccchHHHHHHHHHhhCce-EEEecCCc--chhh
Confidence 222 444444443 24567777665533 22446677888899888877 44443321 1111
Q ss_pred hhhhhccCCCcEEEE-eccChHHhhccccccceeccCChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccC
Q 012412 325 KFSDETLTSHKSLVV-SWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPI 403 (464)
Q Consensus 325 ~~~~~~~~~~nv~~~-~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~ 403 (464)
.+.+ -++.+. .-+...+||..+++ +|+-|| ....||...|+|.+.+ ..++-...-+.+.+. |. ....
T Consensus 227 ~~~~-----~~~~i~~~~vd~~~Ll~~a~l--~Ig~gg-TMa~EAA~LGtPaIs~-~~g~~~~vd~~L~~~-Gl--l~~~ 294 (335)
T PF04007_consen 227 LFEK-----YGVIIPPEPVDGLDLLYYADL--VIGGGG-TMAREAALLGTPAISC-FPGKLLAVDKYLIEK-GL--LYHS 294 (335)
T ss_pred HHhc-----cCccccCCCCCHHHHHHhcCE--EEeCCc-HHHHHHHHhCCCEEEe-cCCcchhHHHHHHHC-CC--eEec
Confidence 1111 123333 45566689999999 998777 6779999999999973 122322344557777 65 3334
Q ss_pred cCHHHHHHHHHHHh
Q 012412 404 VKRDAIADCISEIL 417 (464)
Q Consensus 404 ~~~~~l~~~i~~ll 417 (464)
-+.+++.+.+.+.+
T Consensus 295 ~~~~ei~~~v~~~~ 308 (335)
T PF04007_consen 295 TDPDEIVEYVRKNL 308 (335)
T ss_pred CCHHHHHHHHHHhh
Confidence 57777777665544
|
They are found in archaea and some bacteria and have no known function. |
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.3e-08 Score=97.80 Aligned_cols=134 Identities=18% Similarity=0.228 Sum_probs=84.9
Q ss_pred CCceEEEEecccccCCHHHHHHHHHHHhhC-----CCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChH-Hhhcc
Q 012412 277 KESVVYVSYGSFVELKAEEMEELAWGLKSS-----DQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQL-EVLAH 350 (464)
Q Consensus 277 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~-~ll~~ 350 (464)
.++.+++..|+.. ..+....++++++.+ +.++++...+.....+ .+..+.....+++.+.++.+.. .++..
T Consensus 187 ~~~~~i~~~g~~~--~~k~~~~~i~~~~~l~~~~~~~~l~i~G~~~~~~~~-~~~~~~~~~~~~v~~~g~~~~~~~~~~~ 263 (353)
T cd03811 187 PDGPVILAVGRLS--PQKGFDTLIRAFALLRKEGPDARLVILGDGPLREEL-EALAKELGLADRVHFLGFQSNPYPYLKA 263 (353)
T ss_pred CCceEEEEEecch--hhcChHHHHHHHHHhhhcCCCceEEEEcCCccHHHH-HHHHHhcCCCccEEEecccCCHHHHHHh
Confidence 4457888888876 223333444444332 3455544332211111 1222332256789999998765 89999
Q ss_pred ccccceecc----CChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHH---HHHHHHHhcCC
Q 012412 351 EATGCFVTH----CGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAI---ADCISEILEGE 420 (464)
Q Consensus 351 ~~~~~vI~H----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l---~~~i~~ll~~~ 420 (464)
+++ +|.- |..+++.||+++|+|+|+... ......+++. +.|...+..+.+.+ .+++..++.++
T Consensus 264 ~d~--~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~----~~~~e~i~~~-~~g~~~~~~~~~~~~~~~~~i~~~~~~~ 333 (353)
T cd03811 264 ADL--FVLSSRYEGFPNVLLEAMALGTPVVATDC----PGPREILEDG-ENGLLVPVGDEAALAAAALALLDLLLDP 333 (353)
T ss_pred CCE--EEeCcccCCCCcHHHHHHHhCCCEEEcCC----CChHHHhcCC-CceEEECCCCHHHHHHHHHHHHhccCCh
Confidence 999 6632 335688999999999997543 3667778888 88998886678888 55555666665
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. |
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.3e-07 Score=91.84 Aligned_cols=135 Identities=21% Similarity=0.233 Sum_probs=84.8
Q ss_pred CCceEEEEeccccc-CCHHHHHHHHHHHhhC--CCeEEEEEcCcccCcCChhh---hhhccCCCcEEEEeccChH-Hhhc
Q 012412 277 KESVVYVSYGSFVE-LKAEEMEELAWGLKSS--DQHFLWVVRESEQAKLPKKF---SDETLTSHKSLVVSWCPQL-EVLA 349 (464)
Q Consensus 277 ~~~~v~vs~Gs~~~-~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~~~---~~~~~~~~nv~~~~~~p~~-~ll~ 349 (464)
++..+++..|++.. -..+.+-..+..+.+. +.+++++-.+.......+.+ .......++|.+.+|.+.. .++.
T Consensus 183 ~~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~~~~~~l~ivG~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~l~ 262 (355)
T cd03819 183 KGKPVILLPGRLTRWKGQEVFIEALARLKKDDPDVHLLIVGDAQGRRFYYAELLELIKRLGLQDRVTFVGHCSDMPAAYA 262 (355)
T ss_pred CCceEEEEeeccccccCHHHHHHHHHHHHhcCCCeEEEEEECCcccchHHHHHHHHHHHcCCcceEEEcCCcccHHHHHH
Confidence 34567788888652 2345555555555542 34544444332221221111 1111245789999996544 8899
Q ss_pred cccccceecc----CC-hhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhc
Q 012412 350 HEATGCFVTH----CG-WNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILE 418 (464)
Q Consensus 350 ~~~~~~vI~H----gG-~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~ 418 (464)
.+++ +|+- -| .+++.||+++|+|+|+.. -......+.+. +.|..++..+.+.+.++|..++.
T Consensus 263 ~ad~--~i~ps~~~e~~~~~l~EA~a~G~PvI~~~----~~~~~e~i~~~-~~g~~~~~~~~~~l~~~i~~~~~ 329 (355)
T cd03819 263 LADI--VVSASTEPEAFGRTAVEAQAMGRPVIASD----HGGARETVRPG-ETGLLVPPGDAEALAQALDQILS 329 (355)
T ss_pred hCCE--EEecCCCCCCCchHHHHHHhcCCCEEEcC----CCCcHHHHhCC-CceEEeCCCCHHHHHHHHHHHHh
Confidence 9999 5532 23 358999999999999754 33456667666 78888876789999999976664
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. |
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=99.11 E-value=1.8e-07 Score=91.59 Aligned_cols=136 Identities=16% Similarity=0.162 Sum_probs=86.6
Q ss_pred CCceEEEEeccccc--CCHHHHHHHHHHHhhC-----CCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChH-Hhh
Q 012412 277 KESVVYVSYGSFVE--LKAEEMEELAWGLKSS-----DQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQL-EVL 348 (464)
Q Consensus 277 ~~~~v~vs~Gs~~~--~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~-~ll 348 (464)
.++.++++.|.... ....+++.+...+++. +.+++++-.+...+.+ ....+.....+++++.++..+. .++
T Consensus 192 ~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~~~~l~i~G~g~~~~~~-~~~~~~~~~~~~v~~~g~~~~~~~~~ 270 (374)
T TIGR03088 192 DESVVVGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVIVGDGPARGAC-EQMVRAAGLAHLVWLPGERDDVPALM 270 (374)
T ss_pred CCCeEEEEEecCCcccCHHHHHHHHHHHHHhCcccccceEEEEecCCchHHHH-HHHHHHcCCcceEEEcCCcCCHHHHH
Confidence 34578888888762 2233333333333332 3355544333221222 1222222245678887766544 899
Q ss_pred cccccccee--cc--CChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcCC
Q 012412 349 AHEATGCFV--TH--CGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGE 420 (464)
Q Consensus 349 ~~~~~~~vI--~H--gG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~~ 420 (464)
..+|+ +| ++ |-..++.||+++|+|+|+... ..+...+++. ..|..++.-+.+++.++|.++++++
T Consensus 271 ~~adi--~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~----~g~~e~i~~~-~~g~~~~~~d~~~la~~i~~l~~~~ 339 (374)
T TIGR03088 271 QALDL--FVLPSLAEGISNTILEAMASGLPVIATAV----GGNPELVQHG-VTGALVPPGDAVALARALQPYVSDP 339 (374)
T ss_pred HhcCE--EEeccccccCchHHHHHHHcCCCEEEcCC----CCcHHHhcCC-CceEEeCCCCHHHHHHHHHHHHhCH
Confidence 99999 77 33 335689999999999998664 3466667666 6788877678999999999999885
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Probab=99.09 E-value=9.1e-08 Score=92.75 Aligned_cols=136 Identities=24% Similarity=0.221 Sum_probs=86.1
Q ss_pred CCceEEEEeccccc-CCHHHHHHHHHHHhhC--CCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChH---Hhhcc
Q 012412 277 KESVVYVSYGSFVE-LKAEEMEELAWGLKSS--DQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQL---EVLAH 350 (464)
Q Consensus 277 ~~~~v~vs~Gs~~~-~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~---~ll~~ 350 (464)
.++.+++.+|+... -..+.+-..+..+.+. +.++++...+.....+ ..+.+....++||.+.+++|+. .++..
T Consensus 177 ~~~~~i~~~g~~~~~k~~~~l~~~~~~l~~~~~~~~l~i~G~~~~~~~~-~~~~~~~~~~~~v~~~g~~~~~~l~~~~~~ 255 (355)
T cd03799 177 GEPLRILSVGRLVEKKGLDYLLEALALLKDRGIDFRLDIVGDGPLRDEL-EALIAELGLEDRVTLLGAKSQEEVRELLRA 255 (355)
T ss_pred CCCeEEEEEeeeccccCHHHHHHHHHHHhhcCCCeEEEEEECCccHHHH-HHHHHHcCCCCeEEECCcCChHHHHHHHHh
Confidence 34567777887652 2334443444444332 3445444333221111 1122222256899999999855 77888
Q ss_pred ccccceec----------cCChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcCC
Q 012412 351 EATGCFVT----------HCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGE 420 (464)
Q Consensus 351 ~~~~~vI~----------HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~~ 420 (464)
+++ +|. -|..+++.||+++|+|+|+.+.. .....+++. ..|...+.-+.+++.++|.++++++
T Consensus 256 adi--~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~----~~~~~i~~~-~~g~~~~~~~~~~l~~~i~~~~~~~ 328 (355)
T cd03799 256 ADL--FVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVS----GIPELVEDG-ETGLLVPPGDPEALADAIERLLDDP 328 (355)
T ss_pred CCE--EEecceecCCCCccCccHHHHHHHHcCCCEEecCCC----CcchhhhCC-CceEEeCCCCHHHHHHHHHHHHhCH
Confidence 999 665 23357899999999999986542 233455555 5888887668999999999999886
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. |
| >cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) | Back alignment and domain information |
|---|
Probab=99.08 E-value=2.5e-09 Score=104.35 Aligned_cols=134 Identities=19% Similarity=0.223 Sum_probs=89.4
Q ss_pred CCceEEEEecccccC-CHHHHHHHHHHHhhCCC-eEEEEEcCccc--CcCChhhhhhccC-CCcEEEEeccChH---Hhh
Q 012412 277 KESVVYVSYGSFVEL-KAEEMEELAWGLKSSDQ-HFLWVVRESEQ--AKLPKKFSDETLT-SHKSLVVSWCPQL---EVL 348 (464)
Q Consensus 277 ~~~~v~vs~Gs~~~~-~~~~~~~~~~al~~~~~-~~i~~~~~~~~--~~~~~~~~~~~~~-~~nv~~~~~~p~~---~ll 348 (464)
+++.|++++|..... ..+.+..++++++++.. +++++.++... ..+.+.. ..... .+|+.+.++.++. .++
T Consensus 197 ~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~~~~vi~~~~~~~~~~l~~~~-~~~~~~~~~v~~~~~~~~~~~~~l~ 275 (363)
T cd03786 197 PKKYILVTLHRVENVDDGEQLEEILEALAELAEEDVPVVFPNHPRTRPRIREAG-LEFLGHHPNVLLISPLGYLYFLLLL 275 (363)
T ss_pred CCCEEEEEeCCccccCChHHHHHHHHHHHHHHhcCCEEEEECCCChHHHHHHHH-HhhccCCCCEEEECCcCHHHHHHHH
Confidence 456788888876532 46777888888876543 24444433211 2222211 11112 4788888766544 678
Q ss_pred ccccccceeccCChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcCC
Q 012412 349 AHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGE 420 (464)
Q Consensus 349 ~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~~ 420 (464)
..+|+ ||+..| |.+.||+++|+|+|+++.. |. +..+.+. |++..+. -+.++|.+++.++++++
T Consensus 276 ~~ad~--~v~~Sg-gi~~Ea~~~g~PvI~~~~~--~~--~~~~~~~-g~~~~~~-~~~~~i~~~i~~ll~~~ 338 (363)
T cd03786 276 KNADL--VLTDSG-GIQEEASFLGVPVLNLRDR--TE--RPETVES-GTNVLVG-TDPEAILAAIEKLLSDE 338 (363)
T ss_pred HcCcE--EEEcCc-cHHhhhhhcCCCEEeeCCC--Cc--cchhhhe-eeEEecC-CCHHHHHHHHHHHhcCc
Confidence 88999 999998 7888999999999998733 22 3345567 7666554 25899999999999985
|
The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st |
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.07 E-value=3.8e-08 Score=94.67 Aligned_cols=129 Identities=12% Similarity=0.101 Sum_probs=84.6
Q ss_pred eEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChH---Hhhccccccce
Q 012412 280 VVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQL---EVLAHEATGCF 356 (464)
Q Consensus 280 ~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~---~ll~~~~~~~v 356 (464)
.+.+..|... +.+-...+++++++.+.++++.-.+.....+.....+.....+++.+.+++++. .+++.+++ +
T Consensus 172 ~~i~~~Gr~~--~~Kg~~~li~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~~~~~~~~~~d~--~ 247 (335)
T cd03802 172 DYLLFLGRIS--PEKGPHLAIRAARRAGIPLKLAGPVSDPDYFYREIAPELLDGPDIEYLGEVGGAEKAELLGNARA--L 247 (335)
T ss_pred CEEEEEEeec--cccCHHHHHHHHHhcCCeEEEEeCCCCHHHHHHHHHHhcccCCcEEEeCCCCHHHHHHHHHhCcE--E
Confidence 3556677774 334455677778888888776654432222211111110025899999999976 56888998 5
Q ss_pred e--c--cCCh-hHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcC
Q 012412 357 V--T--HCGW-NSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEG 419 (464)
Q Consensus 357 I--~--HgG~-~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~ 419 (464)
+ + +-|+ .++.||+++|+|+|+... ..+...+++. ..|...+. .+++.+++.+++..
T Consensus 248 v~ps~~~E~~~~~~lEAma~G~PvI~~~~----~~~~e~i~~~-~~g~l~~~--~~~l~~~l~~l~~~ 308 (335)
T cd03802 248 LFPILWEEPFGLVMIEAMACGTPVIAFRR----GAVPEVVEDG-VTGFLVDS--VEELAAAVARADRL 308 (335)
T ss_pred EeCCcccCCcchHHHHHHhcCCCEEEeCC----CCchhheeCC-CcEEEeCC--HHHHHHHHHHHhcc
Confidence 5 3 2344 579999999999997654 3444555554 56777754 99999999998765
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. |
| >cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.3e-07 Score=91.76 Aligned_cols=132 Identities=20% Similarity=0.203 Sum_probs=81.8
Q ss_pred CCceEEEEecccccCCHHHHHHHHHHHhh-----CCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChH-Hhhcc
Q 012412 277 KESVVYVSYGSFVELKAEEMEELAWGLKS-----SDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQL-EVLAH 350 (464)
Q Consensus 277 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~-----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~-~ll~~ 350 (464)
++..+++..|+.. +.+-...+++++++ .+.+++++-.+...+.+. ...+.+...+|+.+.++..+. .++..
T Consensus 186 ~~~~~~l~~g~~~--~~kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~-~~~~~~~~~~~v~~~g~~~~~~~~~~~ 262 (360)
T cd04951 186 NDTFVILAVGRLV--EAKDYPNLLKAFAKLLSDYLDIKLLIAGDGPLRATLE-RLIKALGLSNRVKLLGLRDDIAAYYNA 262 (360)
T ss_pred CCCEEEEEEeeCc--hhcCcHHHHHHHHHHHhhCCCeEEEEEcCCCcHHHHH-HHHHhcCCCCcEEEecccccHHHHHHh
Confidence 3456788888765 22333333333332 245666554332221111 111222245789999987654 88999
Q ss_pred ccccceeccC----ChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcCC
Q 012412 351 EATGCFVTHC----GWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGE 420 (464)
Q Consensus 351 ~~~~~vI~Hg----G~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~~ 420 (464)
+++ +|.-. ..+++.||+++|+|+|+. |...+...+++. |.... ..+.+++.+++.++++++
T Consensus 263 ad~--~v~~s~~e~~~~~~~Ea~a~G~PvI~~----~~~~~~e~i~~~-g~~~~--~~~~~~~~~~i~~ll~~~ 327 (360)
T cd04951 263 ADL--FVLSSAWEGFGLVVAEAMACELPVVAT----DAGGVREVVGDS-GLIVP--ISDPEALANKIDEILKMS 327 (360)
T ss_pred hce--EEecccccCCChHHHHHHHcCCCEEEe----cCCChhhEecCC-ceEeC--CCCHHHHHHHHHHHHhCC
Confidence 999 66432 257889999999999974 455566666666 55443 468999999999999543
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have |
| >PLN00142 sucrose synthase | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.8e-07 Score=97.07 Aligned_cols=133 Identities=16% Similarity=0.151 Sum_probs=78.7
Q ss_pred ceEEEEecccccCCHHHHHHHHHHHhhC-----CCeEEEEEcCccc--CcCCh---------hhhhhccCCCcEEEEec-
Q 012412 279 SVVYVSYGSFVELKAEEMEELAWGLKSS-----DQHFLWVVRESEQ--AKLPK---------KFSDETLTSHKSLVVSW- 341 (464)
Q Consensus 279 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~--~~~~~---------~~~~~~~~~~nv~~~~~- 341 (464)
..++++.|... +.+-+..+++++++. +.+++++.++... ....+ ++.+++.+.++|.+.+.
T Consensus 573 kpvIl~VGRL~--~~KGid~LIeA~a~l~~l~~~~~LVIVGgg~d~~~s~d~ee~~el~~L~~La~~lgL~~~V~flG~~ 650 (815)
T PLN00142 573 KPIIFSMARLD--RVKNLTGLVEWYGKNKRLRELVNLVVVGGFIDPSKSKDREEIAEIKKMHSLIEKYNLKGQFRWIAAQ 650 (815)
T ss_pred CcEEEEEecCc--ccCCHHHHHHHHHHHHHhCCCcEEEEEECCccccccccHHHHHHHHHHHHHHHHcCCCCcEEEcCCc
Confidence 34677788775 233344455555432 3455554443110 00111 12233335678887653
Q ss_pred ---cChHHhhc----cccccceec---cCChh-HHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHH
Q 012412 342 ---CPQLEVLA----HEATGCFVT---HCGWN-STMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIA 410 (464)
Q Consensus 342 ---~p~~~ll~----~~~~~~vI~---HgG~~-s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~ 410 (464)
.+..+++. .+++ ||. +-|+| ++.||+++|+|+|+.. .......+++. ..|..++..++++++
T Consensus 651 ~~~~~~~eLyr~iadaaDV--fVlPS~~EgFGLvvLEAMA~GlPVVATd----vGG~~EIV~dG-~tG~LV~P~D~eaLA 723 (815)
T PLN00142 651 TNRVRNGELYRYIADTKGA--FVQPALYEAFGLTVVEAMTCGLPTFATC----QGGPAEIIVDG-VSGFHIDPYHGDEAA 723 (815)
T ss_pred CCcccHHHHHHHHHhhCCE--EEeCCcccCCCHHHHHHHHcCCCEEEcC----CCCHHHHhcCC-CcEEEeCCCCHHHHH
Confidence 33344543 3466 764 34554 8899999999999754 44566777777 789888866788888
Q ss_pred HHHHHH----hcCC
Q 012412 411 DCISEI----LEGE 420 (464)
Q Consensus 411 ~~i~~l----l~~~ 420 (464)
++|.++ +.|+
T Consensus 724 ~aI~~lLekLl~Dp 737 (815)
T PLN00142 724 NKIADFFEKCKEDP 737 (815)
T ss_pred HHHHHHHHHhcCCH
Confidence 888765 4565
|
|
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Probab=99.04 E-value=7.2e-07 Score=87.81 Aligned_cols=134 Identities=16% Similarity=0.228 Sum_probs=84.2
Q ss_pred CceEEEEecccccCCHHHHHHHHHHHhhC--CCeEEEEEcCcccCcCChhhhhhcc---C-CCcEEEE-eccChH---Hh
Q 012412 278 ESVVYVSYGSFVELKAEEMEELAWGLKSS--DQHFLWVVRESEQAKLPKKFSDETL---T-SHKSLVV-SWCPQL---EV 347 (464)
Q Consensus 278 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~~~~~~~~---~-~~nv~~~-~~~p~~---~l 347 (464)
+.++++..|... +.+-+..++++++.+ +.+++++.++.....+.+.+.+... . .+++.+. +++++. .+
T Consensus 200 ~~~~i~~~Grl~--~~Kg~~~li~a~~~l~~~~~l~i~g~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 277 (388)
T TIGR02149 200 SRPYILFVGRIT--RQKGVPHLLDAVHYIPKDVQVVLCAGAPDTPEVAEEVRQAVALLDRNRTGIIWINKMLPKEELVEL 277 (388)
T ss_pred CceEEEEEcccc--cccCHHHHHHHHHHHhhcCcEEEEeCCCCcHHHHHHHHHHHHHhccccCceEEecCCCCHHHHHHH
Confidence 345677778765 234455555666554 4566655544322222222222110 1 2346544 678754 77
Q ss_pred hccccccceecc---CC-hhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCH------HHHHHHHHHHh
Q 012412 348 LAHEATGCFVTH---CG-WNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKR------DAIADCISEIL 417 (464)
Q Consensus 348 l~~~~~~~vI~H---gG-~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~------~~l~~~i~~ll 417 (464)
+..+|+ +|.- -| ..++.||+++|+|+|+.. .......+++. +.|..++.-+. +++.++|.+++
T Consensus 278 ~~~aDv--~v~ps~~e~~g~~~lEA~a~G~PvI~s~----~~~~~e~i~~~-~~G~~~~~~~~~~~~~~~~l~~~i~~l~ 350 (388)
T TIGR02149 278 LSNAEV--FVCPSIYEPLGIVNLEAMACGTPVVASA----TGGIPEVVVDG-ETGFLVPPDNSDADGFQAELAKAINILL 350 (388)
T ss_pred HHhCCE--EEeCCccCCCChHHHHHHHcCCCEEEeC----CCCHHHHhhCC-CceEEcCCCCCcccchHHHHHHHHHHHH
Confidence 899999 7742 23 356799999999999865 34566777777 78888873344 89999999999
Q ss_pred cCC
Q 012412 418 EGE 420 (464)
Q Consensus 418 ~~~ 420 (464)
+|+
T Consensus 351 ~~~ 353 (388)
T TIGR02149 351 ADP 353 (388)
T ss_pred hCH
Confidence 886
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor. |
| >PRK14089 ipid-A-disaccharide synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.04 E-value=2.2e-08 Score=95.28 Aligned_cols=146 Identities=14% Similarity=0.076 Sum_probs=90.9
Q ss_pred CceEEEEecccccCCHHHHHHHHHHHhhCCCe-EEEEEcCcccCcCChhhhhhccCCCcEEEEeccChHHhhccccccce
Q 012412 278 ESVVYVSYGSFVELKAEEMEELAWGLKSSDQH-FLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCF 356 (464)
Q Consensus 278 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~v 356 (464)
+++|.+--||-..--...+..++++.+.+..+ .++.+...... +.+.+.......+.+.+ .-.+++..||+ +
T Consensus 167 ~~~I~llPGSR~~Ei~~llP~~~~aa~~L~~~~~~~~i~~a~~~---~~i~~~~~~~~~~~~~~--~~~~~m~~aDl--a 239 (347)
T PRK14089 167 EGTIAFMPGSRKSEIKRLMPIFKELAKKLEGKEKILVVPSFFKG---KDLKEIYGDISEFEISY--DTHKALLEAEF--A 239 (347)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCcEEEEeCCCcH---HHHHHHHhcCCCcEEec--cHHHHHHhhhH--H
Confidence 36899999997643234445444555443221 23333332111 22222211112333332 33489999999 9
Q ss_pred eccCChhHHHHHHHhCCcEec-cCCccchhhHHHHHH---hHhcceeec--------------c-CcCHHHHHHHHHHHh
Q 012412 357 VTHCGWNSTMEALSLGVPMVA-MPQWSDQSTNAKYIL---DVWKTGLKF--------------P-IVKRDAIADCISEIL 417 (464)
Q Consensus 357 I~HgG~~s~~eal~~GvP~v~-~P~~~DQ~~na~rl~---~~~G~g~~l--------------~-~~~~~~l~~~i~~ll 417 (464)
|+-.|..|+ |++.+|+|+|+ .....-|+.||+++. .. |+.-.+ . +++++.|.+.+.+ +
T Consensus 240 l~~SGT~TL-E~al~g~P~Vv~Yk~~~lty~iak~lv~~~~i-gL~Nii~~~~~~~~vvPEllQ~~~t~~~la~~i~~-~ 316 (347)
T PRK14089 240 FICSGTATL-EAALIGTPFVLAYKAKAIDYFIAKMFVKLKHI-GLANIFFDFLGKEPLHPELLQEFVTVENLLKAYKE-M 316 (347)
T ss_pred HhcCcHHHH-HHHHhCCCEEEEEeCCHHHHHHHHHHHcCCee-ehHHHhcCCCcccccCchhhcccCCHHHHHHHHHH-H
Confidence 999999999 99999999998 334557999999999 55 655444 2 7899999999987 2
Q ss_pred cCCchHHHHHHHHHHHHHH
Q 012412 418 EGERGKELRRNAGKWRKLA 436 (464)
Q Consensus 418 ~~~~~~~~~~~a~~l~~~~ 436 (464)
.. +.+++...++.+.+
T Consensus 317 ~~---~~~~~~~~~l~~~l 332 (347)
T PRK14089 317 DR---EKFFKKSKELREYL 332 (347)
T ss_pred HH---HHHHHHHHHHHHHh
Confidence 22 25666666665555
|
|
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.02 E-value=3.2e-07 Score=89.23 Aligned_cols=127 Identities=20% Similarity=0.279 Sum_probs=75.2
Q ss_pred EEEEecccccCCHHHHHHHHHHHhhCC--CeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChH---Hhhccccccc
Q 012412 281 VYVSYGSFVELKAEEMEELAWGLKSSD--QHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQL---EVLAHEATGC 355 (464)
Q Consensus 281 v~vs~Gs~~~~~~~~~~~~~~al~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~---~ll~~~~~~~ 355 (464)
.++..|+.. +.+-+..++++++++. .+++++..+.....+.+.+.+.....++|.+.+++|+. +++..+++
T Consensus 195 ~i~~~G~~~--~~Kg~~~li~a~~~l~~~~~l~ivG~~~~~~~~~~~~~~~~~~~~~V~~~g~~~~~~~~~~~~~ad~-- 270 (363)
T cd04955 195 YYLLVGRIV--PENNIDDLIEAFSKSNSGKKLVIVGNADHNTPYGKLLKEKAAADPRIIFVGPIYDQELLELLRYAAL-- 270 (363)
T ss_pred EEEEEeccc--ccCCHHHHHHHHHhhccCceEEEEcCCCCcchHHHHHHHHhCCCCcEEEccccChHHHHHHHHhCCE--
Confidence 345678876 2334445566665543 55554443322222222222222256899999999986 56777888
Q ss_pred eeccC----Ch-hHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcCC
Q 012412 356 FVTHC----GW-NSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGE 420 (464)
Q Consensus 356 vI~Hg----G~-~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~~ 420 (464)
++.+. |+ .++.||+++|+|+|+..... +...++.. |.. .+. .+.+++++.++++|+
T Consensus 271 ~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~----~~e~~~~~-g~~--~~~--~~~l~~~i~~l~~~~ 331 (363)
T cd04955 271 FYLHGHSVGGTNPSLLEAMAYGCPVLASDNPF----NREVLGDK-AIY--FKV--GDDLASLLEELEADP 331 (363)
T ss_pred EEeCCccCCCCChHHHHHHHcCCCEEEecCCc----cceeecCC-eeE--ecC--chHHHHHHHHHHhCH
Confidence 55433 33 57899999999999865432 22222233 333 221 122999999999885
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.01 E-value=2.1e-07 Score=90.43 Aligned_cols=135 Identities=16% Similarity=0.099 Sum_probs=82.6
Q ss_pred CCceEEEEeccccc-CCHHHHHHHHHHHhhC--CCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChH-Hhhcccc
Q 012412 277 KESVVYVSYGSFVE-LKAEEMEELAWGLKSS--DQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQL-EVLAHEA 352 (464)
Q Consensus 277 ~~~~v~vs~Gs~~~-~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~-~ll~~~~ 352 (464)
+++.+++..|+... -..+.+-..+..+.+. +.+++++-.+.....+.. ..+.....+++.+.++..+. +++..++
T Consensus 190 ~~~~~i~~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~~-~~~~~~~~~~v~~~g~~~~~~~~~~~ad 268 (358)
T cd03812 190 EDKFVIGHVGRFSEQKNHEFLIEIFAELLKKNPNAKLLLVGDGELEEEIKK-KVKELGLEDKVIFLGVRNDVPELLQAMD 268 (358)
T ss_pred CCCEEEEEEeccccccChHHHHHHHHHHHHhCCCeEEEEEeCCchHHHHHH-HHHhcCCCCcEEEecccCCHHHHHHhcC
Confidence 44577888888762 2334444444444332 345554433322111111 11122256889999985544 8999999
Q ss_pred ccceecc----CChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcCC
Q 012412 353 TGCFVTH----CGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGE 420 (464)
Q Consensus 353 ~~~vI~H----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~~ 420 (464)
+ +|.- |-..+++||+++|+|+|+....+ ....+++ +.|......++++++++|.++++|+
T Consensus 269 i--~v~ps~~E~~~~~~lEAma~G~PvI~s~~~~----~~~~i~~--~~~~~~~~~~~~~~a~~i~~l~~~~ 332 (358)
T cd03812 269 V--FLFPSLYEGLPLVLIEAQASGLPCILSDTIT----KEVDLTD--LVKFLSLDESPEIWAEEILKLKSED 332 (358)
T ss_pred E--EEecccccCCCHHHHHHHHhCCCEEEEcCCc----hhhhhcc--CccEEeCCCCHHHHHHHHHHHHhCc
Confidence 9 6643 34578999999999999865433 3333333 3444444456899999999999997
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). |
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.97 E-value=1.7e-06 Score=83.56 Aligned_cols=147 Identities=18% Similarity=0.193 Sum_probs=86.6
Q ss_pred CCceEEEEecccccCCHHHHHHHHHHHhh-----CCCeEEEEEcCcccCcCChhhhh-hccCCCcEEEEeccChH-Hhhc
Q 012412 277 KESVVYVSYGSFVELKAEEMEELAWGLKS-----SDQHFLWVVRESEQAKLPKKFSD-ETLTSHKSLVVSWCPQL-EVLA 349 (464)
Q Consensus 277 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~-----~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~nv~~~~~~p~~-~ll~ 349 (464)
++..+++.+|+... .+....++++++. .+.+++++..+..... ...... .....+++.+.++.... .++.
T Consensus 191 ~~~~~i~~~G~~~~--~K~~~~li~a~~~l~~~~~~~~l~i~G~~~~~~~-~~~~~~~~~~~~~~v~~~g~~~~~~~~~~ 267 (365)
T cd03807 191 EDTFLIGIVARLHP--QKDHATLLRAAALLLKKFPNARLLLVGDGPDRAN-LELLALKELGLEDKVILLGERSDVPALLN 267 (365)
T ss_pred CCCeEEEEecccch--hcCHHHHHHHHHHHHHhCCCeEEEEecCCcchhH-HHHHHHHhcCCCceEEEccccccHHHHHH
Confidence 34567788888763 2223333443322 2345555432221111 111111 22255788888766544 8999
Q ss_pred cccccceeccCC----hhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcCCchHHH
Q 012412 350 HEATGCFVTHCG----WNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGERGKEL 425 (464)
Q Consensus 350 ~~~~~~vI~HgG----~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~~~~~~~ 425 (464)
.+++ +|..+. .+++.||+++|+|+|+.. ...+...+.+. |..++..+.+++.+++.++++++ +.+
T Consensus 268 ~adi--~v~ps~~e~~~~~~~Ea~a~g~PvI~~~----~~~~~e~~~~~---g~~~~~~~~~~l~~~i~~l~~~~--~~~ 336 (365)
T cd03807 268 ALDV--FVLSSLSEGFPNVLLEAMACGLPVVATD----VGDNAELVGDT---GFLVPPGDPEALAEAIEALLADP--ALR 336 (365)
T ss_pred hCCE--EEeCCccccCCcHHHHHHhcCCCEEEcC----CCChHHHhhcC---CEEeCCCCHHHHHHHHHHHHhCh--HHH
Confidence 9999 775443 479999999999999854 44455555555 44455457999999999999986 233
Q ss_pred HHHHHHHHHHHH
Q 012412 426 RRNAGKWRKLAK 437 (464)
Q Consensus 426 ~~~a~~l~~~~~ 437 (464)
++..+...+.++
T Consensus 337 ~~~~~~~~~~~~ 348 (365)
T cd03807 337 QALGEAARERIE 348 (365)
T ss_pred HHHHHHHHHHHH
Confidence 333334333443
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. |
| >PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
Probab=98.95 E-value=1e-06 Score=87.11 Aligned_cols=133 Identities=14% Similarity=0.189 Sum_probs=86.7
Q ss_pred CceEEEEecccccCCHHHHHHHHHHHh---hC--CCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChH---Hhhc
Q 012412 278 ESVVYVSYGSFVELKAEEMEELAWGLK---SS--DQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQL---EVLA 349 (464)
Q Consensus 278 ~~~v~vs~Gs~~~~~~~~~~~~~~al~---~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~---~ll~ 349 (464)
.+..+++.|... +.+-+..++++++ +. +.+++++..+...+.+ ....+.+...++|.+.+|+|+. +++.
T Consensus 221 ~~~~il~vGrl~--~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~G~~~~~l-~~~~~~~~l~~~V~~~G~~~~~el~~~l~ 297 (406)
T PRK15427 221 TPLEIISVARLT--EKKGLHVAIEACRQLKEQGVAFRYRILGIGPWERRL-RTLIEQYQLEDVVEMPGFKPSHEVKAMLD 297 (406)
T ss_pred CCeEEEEEeCcc--hhcCHHHHHHHHHHHHhhCCCEEEEEEECchhHHHH-HHHHHHcCCCCeEEEeCCCCHHHHHHHHH
Confidence 446677788876 2233333444433 22 3344444333222212 1222232356889999999976 6888
Q ss_pred cccccceec--c-------CCh-hHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhc-
Q 012412 350 HEATGCFVT--H-------CGW-NSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILE- 418 (464)
Q Consensus 350 ~~~~~~vI~--H-------gG~-~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~- 418 (464)
.+|+ +|. + -|+ .+++||+++|+|+|+... ......+++. ..|..++.-+.++++++|.++++
T Consensus 298 ~aDv--~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~----~g~~E~v~~~-~~G~lv~~~d~~~la~ai~~l~~~ 370 (406)
T PRK15427 298 DADV--FLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLH----SGIPELVEAD-KSGWLVPENDAQALAQRLAAFSQL 370 (406)
T ss_pred hCCE--EEECCccCCCCCccCccHHHHHHHhCCCCEEEeCC----CCchhhhcCC-CceEEeCCCCHHHHHHHHHHHHhC
Confidence 9999 764 2 354 568999999999998653 3455666666 77888876789999999999998
Q ss_pred CC
Q 012412 419 GE 420 (464)
Q Consensus 419 ~~ 420 (464)
|+
T Consensus 371 d~ 372 (406)
T PRK15427 371 DT 372 (406)
T ss_pred CH
Confidence 75
|
|
| >PLN02275 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=98.94 E-value=9.8e-07 Score=86.28 Aligned_cols=75 Identities=21% Similarity=0.299 Sum_probs=57.0
Q ss_pred CcEEEEe-ccChH---Hhhccccccceec----c--CC-hhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeecc
Q 012412 334 HKSLVVS-WCPQL---EVLAHEATGCFVT----H--CG-WNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP 402 (464)
Q Consensus 334 ~nv~~~~-~~p~~---~ll~~~~~~~vI~----H--gG-~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~ 402 (464)
+|+.+.. |+|.. .+|+.+|+ +|. . -| -+++.||+++|+|+|+.. -..+...+++. +.|...+
T Consensus 286 ~~v~~~~~~~~~~~~~~~l~~aDv--~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~----~gg~~eiv~~g-~~G~lv~ 358 (371)
T PLN02275 286 RHVAFRTMWLEAEDYPLLLGSADL--GVSLHTSSSGLDLPMKVVDMFGCGLPVCAVS----YSCIGELVKDG-KNGLLFS 358 (371)
T ss_pred CceEEEcCCCCHHHHHHHHHhCCE--EEEeccccccccccHHHHHHHHCCCCEEEec----CCChHHHccCC-CCeEEEC
Confidence 4677665 78876 56999999 773 1 12 357999999999999864 33477778788 8898886
Q ss_pred CcCHHHHHHHHHHHh
Q 012412 403 IVKRDAIADCISEIL 417 (464)
Q Consensus 403 ~~~~~~l~~~i~~ll 417 (464)
++++|+++|.++|
T Consensus 359 --~~~~la~~i~~l~ 371 (371)
T PLN02275 359 --SSSELADQLLELL 371 (371)
T ss_pred --CHHHHHHHHHHhC
Confidence 5899999998875
|
|
| >PLN02949 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=98.89 E-value=5.8e-06 Score=82.63 Aligned_cols=80 Identities=16% Similarity=0.091 Sum_probs=55.5
Q ss_pred CCCcEEEEeccChH---Hhhccccccceec---cCChh-HHHHHHHhCCcEeccCCcc---chhhHHHHHHhHhcceeec
Q 012412 332 TSHKSLVVSWCPQL---EVLAHEATGCFVT---HCGWN-STMEALSLGVPMVAMPQWS---DQSTNAKYILDVWKTGLKF 401 (464)
Q Consensus 332 ~~~nv~~~~~~p~~---~ll~~~~~~~vI~---HgG~~-s~~eal~~GvP~v~~P~~~---DQ~~na~rl~~~~G~g~~l 401 (464)
+.++|.+.+++|+. .+|..+++ +|+ +-|+| ++.||+++|+|+|+....+ |.-... ... ..|...
T Consensus 333 L~~~V~f~g~v~~~el~~ll~~a~~--~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~---~~g-~tG~l~ 406 (463)
T PLN02949 333 LDGDVEFHKNVSYRDLVRLLGGAVA--GLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDE---DGQ-QTGFLA 406 (463)
T ss_pred CCCcEEEeCCCCHHHHHHHHHhCcE--EEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcceeeecC---CCC-cccccC
Confidence 57899999999866 67888988 773 33444 7899999999999976533 111100 001 124333
Q ss_pred cCcCHHHHHHHHHHHhcC
Q 012412 402 PIVKRDAIADCISEILEG 419 (464)
Q Consensus 402 ~~~~~~~l~~~i~~ll~~ 419 (464)
-+.++++++|.+++++
T Consensus 407 --~~~~~la~ai~~ll~~ 422 (463)
T PLN02949 407 --TTVEEYADAILEVLRM 422 (463)
T ss_pred --CCHHHHHHHHHHHHhC
Confidence 2899999999999985
|
|
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=98.88 E-value=6.6e-07 Score=90.19 Aligned_cols=132 Identities=12% Similarity=0.156 Sum_probs=78.1
Q ss_pred CceEEEEecccccCCHHHHHHHHHHHh---hCCCeEEEEEcCcccCcCChh---hhhhccCCCcEEE-EeccChH--Hhh
Q 012412 278 ESVVYVSYGSFVELKAEEMEELAWGLK---SSDQHFLWVVRESEQAKLPKK---FSDETLTSHKSLV-VSWCPQL--EVL 348 (464)
Q Consensus 278 ~~~v~vs~Gs~~~~~~~~~~~~~~al~---~~~~~~i~~~~~~~~~~~~~~---~~~~~~~~~nv~~-~~~~p~~--~ll 348 (464)
+.++++..|.+. +.+-+..++++++ +.+.++++.-.+. ....+. +.++ .+.++.+ .+|-... .++
T Consensus 281 ~~~~i~~vGRl~--~~KG~~~li~a~~~l~~~~~~lvivG~g~--~~~~~~l~~l~~~--~~~~v~~~~g~~~~~~~~~~ 354 (466)
T PRK00654 281 DAPLFAMVSRLT--EQKGLDLVLEALPELLEQGGQLVLLGTGD--PELEEAFRALAAR--YPGKVGVQIGYDEALAHRIY 354 (466)
T ss_pred CCcEEEEeeccc--cccChHHHHHHHHHHHhcCCEEEEEecCc--HHHHHHHHHHHHH--CCCcEEEEEeCCHHHHHHHH
Confidence 446777888876 2233333444433 3367776664332 111122 2222 4566654 4663322 678
Q ss_pred ccccccceec---cCChh-HHHHHHHhCCcEeccCCcc--chhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhc
Q 012412 349 AHEATGCFVT---HCGWN-STMEALSLGVPMVAMPQWS--DQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILE 418 (464)
Q Consensus 349 ~~~~~~~vI~---HgG~~-s~~eal~~GvP~v~~P~~~--DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~ 418 (464)
+.+|+ +|. +-|+| +.+||+++|+|.|+....+ |.-.+...-.+. +.|..++..++++|.++|.+++.
T Consensus 355 ~~aDv--~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~-~~G~lv~~~d~~~la~~i~~~l~ 427 (466)
T PRK00654 355 AGADM--FLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGE-ATGFVFDDFNAEDLLRALRRALE 427 (466)
T ss_pred hhCCE--EEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCC-CceEEeCCCCHHHHHHHHHHHHH
Confidence 99999 773 34554 7899999999999865322 321111111344 67888887789999999999986
|
|
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.86 E-value=1e-06 Score=85.56 Aligned_cols=134 Identities=16% Similarity=0.120 Sum_probs=79.7
Q ss_pred CceEEEEeccccc-CCHHHHHHHHHHHhhCC--CeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChH---Hhhccc
Q 012412 278 ESVVYVSYGSFVE-LKAEEMEELAWGLKSSD--QHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQL---EVLAHE 351 (464)
Q Consensus 278 ~~~v~vs~Gs~~~-~~~~~~~~~~~al~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~---~ll~~~ 351 (464)
...+++..|+... -..+.+-..+..+.+.+ .++++...+...........+.....+|+.+.+++|+. .++..+
T Consensus 194 ~~~~i~~~G~~~~~K~~~~~l~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~ 273 (365)
T cd03809 194 PRPYFLYVGTIEPRKNLERLLEAFARLPAKGPDPKLVIVGKRGWLNEELLARLRELGLGDRVRFLGYVSDEELAALYRGA 273 (365)
T ss_pred CCCeEEEeCCCccccCHHHHHHHHHHHHHhcCCCCEEEecCCccccHHHHHHHHHcCCCCeEEECCCCChhHHHHHHhhh
Confidence 3456677788762 23444444444443332 45544432221111111110122267899999999876 678899
Q ss_pred cccceecc----CChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcCC
Q 012412 352 ATGCFVTH----CGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGE 420 (464)
Q Consensus 352 ~~~~vI~H----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~~ 420 (464)
|+ +|.- |..+++.||+++|+|+|+.... .....+.+. |..+...+.+++.+++.+++.|+
T Consensus 274 d~--~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~----~~~e~~~~~---~~~~~~~~~~~~~~~i~~l~~~~ 337 (365)
T cd03809 274 RA--FVFPSLYEGFGLPVLEAMACGTPVIASNIS----SLPEVAGDA---ALYFDPLDPEALAAAIERLLEDP 337 (365)
T ss_pred hh--hcccchhccCCCCHHHHhcCCCcEEecCCC----CccceecCc---eeeeCCCCHHHHHHHHHHHhcCH
Confidence 98 6533 3346899999999999985542 222223333 44445458999999999999886
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. |
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Probab=98.83 E-value=7.1e-06 Score=80.31 Aligned_cols=134 Identities=16% Similarity=0.097 Sum_probs=80.3
Q ss_pred CceEEEEeccccc-CCHHHHHHHHHHH-hh-CCCeEEEEEcCcccCcC----ChhhhhhccCCCcEEEEecc--ChH---
Q 012412 278 ESVVYVSYGSFVE-LKAEEMEELAWGL-KS-SDQHFLWVVRESEQAKL----PKKFSDETLTSHKSLVVSWC--PQL--- 345 (464)
Q Consensus 278 ~~~v~vs~Gs~~~-~~~~~~~~~~~al-~~-~~~~~i~~~~~~~~~~~----~~~~~~~~~~~~nv~~~~~~--p~~--- 345 (464)
+..+++..|.+.. -..+.+-..+..+ +. .+.+++++.++...... -+.+.+.....+++.+.++. ++.
T Consensus 189 ~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 268 (372)
T cd03792 189 ERPYITQVSRFDPWKDPFGVIDAYRKVKERVPDPQLVLVGSGATDDPEGWIVYEEVLEYAEGDPDIHVLTLPPVSDLEVN 268 (372)
T ss_pred CCcEEEEEeccccccCcHHHHHHHHHHHhhCCCCEEEEEeCCCCCCchhHHHHHHHHHHhCCCCCeEEEecCCCCHHHHH
Confidence 3457788888762 2233333333323 22 34566655444221111 11212122245788888876 433
Q ss_pred HhhccccccceeccC---C-hhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcCC
Q 012412 346 EVLAHEATGCFVTHC---G-WNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGE 420 (464)
Q Consensus 346 ~ll~~~~~~~vI~Hg---G-~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~~ 420 (464)
.+++.+|+ ++.-. | ..++.||+++|+|+|+... ......+++. ..|...+ +.+.++.+|.+++.|+
T Consensus 269 ~~~~~ad~--~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~----~~~~~~i~~~-~~g~~~~--~~~~~a~~i~~ll~~~ 338 (372)
T cd03792 269 ALQRASTV--VLQKSIREGFGLTVTEALWKGKPVIAGPV----GGIPLQIEDG-ETGFLVD--TVEEAAVRILYLLRDP 338 (372)
T ss_pred HHHHhCeE--EEeCCCccCCCHHHHHHHHcCCCEEEcCC----CCchhhcccC-CceEEeC--CcHHHHHHHHHHHcCH
Confidence 67889999 87533 3 3489999999999998653 2344556666 6777664 4678888999999886
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. |
| >COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.82 E-value=7.5e-06 Score=77.70 Aligned_cols=312 Identities=14% Similarity=0.154 Sum_probs=173.9
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhC--CCeEEEEe-CcccccccccCCCCCCceEEEccCCCCCCCCCCccCHHHHHHH
Q 012412 15 HCLVLTYPGQGHINPLLQFSRRLQHK--GIKVTLVT-TRFFYKSLHRDSSSSSIPLEAISDGYDEGGYAQAESIEAYLER 91 (464)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~r--Gh~V~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 91 (464)
-.+.+..-+.|-++...+|.++|.++ +..|++-+ ++...+.+.+-.. ..+...-+| ++.
T Consensus 50 p~vWiHaaSVGEv~a~~pLv~~l~~~~P~~~ilvTt~T~Tg~e~a~~~~~-~~v~h~YlP--~D~--------------- 111 (419)
T COG1519 50 PLVWIHAASVGEVLAALPLVRALRERFPDLRILVTTMTPTGAERAAALFG-DSVIHQYLP--LDL--------------- 111 (419)
T ss_pred CeEEEEecchhHHHHHHHHHHHHHHhCCCCCEEEEecCccHHHHHHHHcC-CCeEEEecC--cCc---------------
Confidence 35566667789999999999999999 88888877 6666666652111 124444445 211
Q ss_pred HHHhCcHHHHHHHHHhcCCCCCccEEEeCCchhhH--HHHHHHcCCccEEEecchHHHHHHHhhhhcCcccCCCCCCcee
Q 012412 92 FWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWA--LDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNEIL 169 (464)
Q Consensus 92 ~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~~~~--~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 169 (464)
...++...+.++| |++|.-....|. ..-+++.|+|.+.+..--
T Consensus 112 ---------~~~v~rFl~~~~P-~l~Ii~EtElWPnli~e~~~~~~p~~LvNaRL------------------------- 156 (419)
T COG1519 112 ---------PIAVRRFLRKWRP-KLLIIMETELWPNLINELKRRGIPLVLVNARL------------------------- 156 (419)
T ss_pred ---------hHHHHHHHHhcCC-CEEEEEeccccHHHHHHHHHcCCCEEEEeeee-------------------------
Confidence 1222333333467 999887777664 555788999999863311
Q ss_pred CCCCCCCCCCCCCCccccCCCCchHHHHHHHHHhhhccCCcEEEecchhhhhHHHHHHHHhcCCeeeecccCCCcccccc
Q 012412 170 LPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTWSLRTIGPTIPSFYLDKQ 249 (464)
Q Consensus 170 ~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~vgp~~~~~~~~~~ 249 (464)
..+...+ + . ..+.+.+..+ .+-+.+++.|...-+ ....+... ++...|-+=-+
T Consensus 157 -------S~rS~~~----y---~-k~~~~~~~~~---~~i~li~aQse~D~~--Rf~~LGa~-~v~v~GNlKfd------ 209 (419)
T COG1519 157 -------SDRSFAR----Y---A-KLKFLARLLF---KNIDLILAQSEEDAQ--RFRSLGAK-PVVVTGNLKFD------ 209 (419)
T ss_pred -------chhhhHH----H---H-HHHHHHHHHH---HhcceeeecCHHHHH--HHHhcCCc-ceEEecceeec------
Confidence 1001101 1 1 1111111222 334577777744222 22222211 24444533111
Q ss_pred ccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhh-CCCeEEEEEcCcccCcCCh--h-
Q 012412 250 IEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKS-SDQHFLWVVRESEQAKLPK--K- 325 (464)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~-~~~~~i~~~~~~~~~~~~~--~- 325 (464)
......+......|-..-+....+.|..+|... ..+..-...+++.+ .+...++.++. +.+.+++ +
T Consensus 210 --------~~~~~~~~~~~~~~r~~l~~~r~v~iaaSTH~G-Eeei~l~~~~~l~~~~~~~llIlVPR-HpERf~~v~~l 279 (419)
T COG1519 210 --------IEPPPQLAAELAALRRQLGGHRPVWVAASTHEG-EEEIILDAHQALKKQFPNLLLILVPR-HPERFKAVENL 279 (419)
T ss_pred --------CCCChhhHHHHHHHHHhcCCCCceEEEecCCCc-hHHHHHHHHHHHHhhCCCceEEEecC-ChhhHHHHHHH
Confidence 100000122222222221111246677777432 34444445555543 33333333322 2221111 0
Q ss_pred ---------hhhhc--c-CCCcEEEEeccChH-Hhhccccc----cceeccCChhHHHHHHHhCCcEeccCCccchhhHH
Q 012412 326 ---------FSDET--L-TSHKSLVVSWCPQL-EVLAHEAT----GCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNA 388 (464)
Q Consensus 326 ---------~~~~~--~-~~~nv~~~~~~p~~-~ll~~~~~----~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na 388 (464)
.+++. . ...+|.+.|-+--+ .++.-+++ +.++-+||.| ..|++++|+|++.=|...-|.+-+
T Consensus 280 ~~~~gl~~~~rS~~~~~~~~tdV~l~DtmGEL~l~y~~adiAFVGGSlv~~GGHN-~LEpa~~~~pvi~Gp~~~Nf~ei~ 358 (419)
T COG1519 280 LKRKGLSVTRRSQGDPPFSDTDVLLGDTMGELGLLYGIADIAFVGGSLVPIGGHN-PLEPAAFGTPVIFGPYTFNFSDIA 358 (419)
T ss_pred HHHcCCeEEeecCCCCCCCCCcEEEEecHhHHHHHHhhccEEEECCcccCCCCCC-hhhHHHcCCCEEeCCccccHHHHH
Confidence 01110 0 22378888876654 66666665 2234688888 579999999999999999999999
Q ss_pred HHHHhHhcceeeccCcCHHHHHHHHHHHhcCC
Q 012412 389 KYILDVWKTGLKFPIVKRDAIADCISEILEGE 420 (464)
Q Consensus 389 ~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~~ 420 (464)
+++++. |+|+.+++ .+.|.++++.++.|+
T Consensus 359 ~~l~~~-ga~~~v~~--~~~l~~~v~~l~~~~ 387 (419)
T COG1519 359 ERLLQA-GAGLQVED--ADLLAKAVELLLADE 387 (419)
T ss_pred HHHHhc-CCeEEECC--HHHHHHHHHHhcCCH
Confidence 999999 99999964 888999999998886
|
|
| >TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=98.82 E-value=3e-07 Score=90.90 Aligned_cols=80 Identities=23% Similarity=0.226 Sum_probs=61.5
Q ss_pred CCCcEEEEeccChH-Hhhcccccccee--cc--CCh-hHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcC
Q 012412 332 TSHKSLVVSWCPQL-EVLAHEATGCFV--TH--CGW-NSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVK 405 (464)
Q Consensus 332 ~~~nv~~~~~~p~~-~ll~~~~~~~vI--~H--gG~-~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~ 405 (464)
..++|.+.+++++. .++..+++ +| ++ .|. +.+.||+++|+|+|+.+...+.. .+.. |.|..+. .+
T Consensus 278 ~~~~V~~~G~v~~~~~~~~~adv--~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~~i-----~~~~-~~g~lv~-~~ 348 (397)
T TIGR03087 278 ALPGVTVTGSVADVRPYLAHAAV--AVAPLRIARGIQNKVLEAMAMAKPVVASPEAAEGI-----DALP-GAELLVA-AD 348 (397)
T ss_pred cCCCeEEeeecCCHHHHHHhCCE--EEecccccCCcccHHHHHHHcCCCEEecCcccccc-----cccC-CcceEeC-CC
Confidence 45789999999865 88999999 66 32 455 46999999999999987543321 1235 6677665 68
Q ss_pred HHHHHHHHHHHhcCC
Q 012412 406 RDAIADCISEILEGE 420 (464)
Q Consensus 406 ~~~l~~~i~~ll~~~ 420 (464)
+++++++|.++++|+
T Consensus 349 ~~~la~ai~~ll~~~ 363 (397)
T TIGR03087 349 PADFAAAILALLANP 363 (397)
T ss_pred HHHHHHHHHHHHcCH
Confidence 999999999999986
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=98.79 E-value=1.3e-05 Score=83.37 Aligned_cols=147 Identities=18% Similarity=0.191 Sum_probs=88.6
Q ss_pred CceEEEEeccccc--CCHHHHHHHHHHHhhCC-CeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChH-Hhhccccc
Q 012412 278 ESVVYVSYGSFVE--LKAEEMEELAWGLKSSD-QHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQL-EVLAHEAT 353 (464)
Q Consensus 278 ~~~v~vs~Gs~~~--~~~~~~~~~~~al~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~-~ll~~~~~ 353 (464)
...++++.|.+.. ....+++.+...+++.+ .+++++-.+...+.+ +++.+.+.+.++|.+.+|.++. .++..+|+
T Consensus 516 ~~~vIg~VGRL~~~KG~~~LI~A~a~l~~~~p~~~LvIvG~G~~~~~L-~~l~~~lgL~~~V~flG~~~dv~~ll~aaDv 594 (694)
T PRK15179 516 ARFTVGTVMRVDDNKRPFLWVEAAQRFAASHPKVRFIMVGGGPLLESV-REFAQRLGMGERILFTGLSRRVGYWLTQFNA 594 (694)
T ss_pred CCeEEEEEEeCCccCCHHHHHHHHHHHHHHCcCeEEEEEccCcchHHH-HHHHHHcCCCCcEEEcCCcchHHHHHHhcCE
Confidence 3456667777652 12233333333333333 454444333211111 2233333356899999998865 88999999
Q ss_pred cceec---cCCh-hHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeecc--CcCHHHHHHHHHHHhcCCch-HHHH
Q 012412 354 GCFVT---HCGW-NSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP--IVKRDAIADCISEILEGERG-KELR 426 (464)
Q Consensus 354 ~~vI~---HgG~-~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~--~~~~~~l~~~i~~ll~~~~~-~~~~ 426 (464)
+|. +.|+ +++.||+++|+|+|+... ......+++- ..|..++ +.+++++.+++.+++.+... +.++
T Consensus 595 --~VlpS~~Egfp~vlLEAMA~G~PVVat~~----gG~~EiV~dg-~~GlLv~~~d~~~~~La~aL~~ll~~l~~~~~l~ 667 (694)
T PRK15179 595 --FLLLSRFEGLPNVLIEAQFSGVPVVTTLA----GGAGEAVQEG-VTGLTLPADTVTAPDVAEALARIHDMCAADPGIA 667 (694)
T ss_pred --EEeccccccchHHHHHHHHcCCeEEEECC----CChHHHccCC-CCEEEeCCCCCChHHHHHHHHHHHhChhccHHHH
Confidence 764 4554 688999999999998664 3466667776 7788887 55667777777776653210 2566
Q ss_pred HHHHHH
Q 012412 427 RNAGKW 432 (464)
Q Consensus 427 ~~a~~l 432 (464)
+++++.
T Consensus 668 ~~ar~~ 673 (694)
T PRK15179 668 RKAADW 673 (694)
T ss_pred HHHHHH
Confidence 555443
|
|
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.78 E-value=5.3e-07 Score=87.49 Aligned_cols=127 Identities=14% Similarity=0.233 Sum_probs=90.3
Q ss_pred EEEEecccccCCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChH---Hhhcccccccee
Q 012412 281 VYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQL---EVLAHEATGCFV 357 (464)
Q Consensus 281 v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~---~ll~~~~~~~vI 357 (464)
.++..|++. ..+-...+++++++++.+++++..+... +.+.+. ..+||.+.+++|+. .++..+++-++-
T Consensus 197 ~il~~G~~~--~~K~~~~li~a~~~~~~~l~ivG~g~~~----~~l~~~--~~~~V~~~g~~~~~~~~~~~~~ad~~v~p 268 (351)
T cd03804 197 YYLSVGRLV--PYKRIDLAIEAFNKLGKRLVVIGDGPEL----DRLRAK--AGPNVTFLGRVSDEELRDLYARARAFLFP 268 (351)
T ss_pred EEEEEEcCc--cccChHHHHHHHHHCCCcEEEEECChhH----HHHHhh--cCCCEEEecCCCHHHHHHHHHhCCEEEEC
Confidence 456677765 3355666778888877777666544322 233332 67899999999985 678899983222
Q ss_pred ccCChh-HHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcCC
Q 012412 358 THCGWN-STMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGE 420 (464)
Q Consensus 358 ~HgG~~-s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~~ 420 (464)
+.-|+| ++.||+++|+|+|+.... .....+++. +.|..++..+.+++.++|.++++|+
T Consensus 269 s~e~~g~~~~Eama~G~Pvi~~~~~----~~~e~i~~~-~~G~~~~~~~~~~la~~i~~l~~~~ 327 (351)
T cd03804 269 AEEDFGIVPVEAMASGTPVIAYGKG----GALETVIDG-VTGILFEEQTVESLAAAVERFEKNE 327 (351)
T ss_pred CcCCCCchHHHHHHcCCCEEEeCCC----CCcceeeCC-CCEEEeCCCCHHHHHHHHHHHHhCc
Confidence 444443 568999999999987643 344556666 7888887668999999999999886
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. |
| >KOG3349 consensus Predicted glycosyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.73 E-value=8.1e-08 Score=76.61 Aligned_cols=113 Identities=17% Similarity=0.191 Sum_probs=79.2
Q ss_pred ceEEEEecccccC---CHHHHHHHHHHHhhCCC-eEEEEEcCcccCcCChhhhhhccCCCcEEE--EeccCh-HHhhccc
Q 012412 279 SVVYVSYGSFVEL---KAEEMEELAWGLKSSDQ-HFLWVVRESEQAKLPKKFSDETLTSHKSLV--VSWCPQ-LEVLAHE 351 (464)
Q Consensus 279 ~~v~vs~Gs~~~~---~~~~~~~~~~al~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~--~~~~p~-~~ll~~~ 351 (464)
..+||+.||.... .--.-....+.|.+.|. +.++..|.+. ...++..... ...+.+.+ .+|-|- .+.++.+
T Consensus 4 ~~vFVTVGtT~Fd~LI~~Vl~~~~~~~L~k~G~~kLiiQ~Grg~-~~~~d~~~~~-~k~~gl~id~y~f~psl~e~I~~A 81 (170)
T KOG3349|consen 4 MTVFVTVGTTSFDDLISCVLSEEFLQELQKRGFTKLIIQIGRGQ-PFFGDPIDLI-RKNGGLTIDGYDFSPSLTEDIRSA 81 (170)
T ss_pred eEEEEEeccccHHHHHHHHcCHHHHHHHHHcCccEEEEEecCCc-cCCCCHHHhh-cccCCeEEEEEecCccHHHHHhhc
Confidence 3799999998731 11222345666777786 6667776652 2233332211 01233333 367886 5888889
Q ss_pred cccceeccCChhHHHHHHHhCCcEeccCC----ccchhhHHHHHHhHhc
Q 012412 352 ATGCFVTHCGWNSTMEALSLGVPMVAMPQ----WSDQSTNAKYILDVWK 396 (464)
Q Consensus 352 ~~~~vI~HgG~~s~~eal~~GvP~v~~P~----~~DQ~~na~rl~~~~G 396 (464)
++ ||+|+|.||++|.|..|+|.++++- .+.|-.-|..+++. |
T Consensus 82 dl--VIsHAGaGS~letL~l~KPlivVvNd~LMDNHQ~ELA~qL~~e-g 127 (170)
T KOG3349|consen 82 DL--VISHAGAGSCLETLRLGKPLIVVVNDSLMDNHQLELAKQLAEE-G 127 (170)
T ss_pred cE--EEecCCcchHHHHHHcCCCEEEEeChHhhhhHHHHHHHHHHhc-C
Confidence 99 9999999999999999999999994 46899999999998 5
|
|
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.72 E-value=1.2e-05 Score=79.96 Aligned_cols=81 Identities=17% Similarity=0.120 Sum_probs=58.8
Q ss_pred CCCcEEEEeccChH---Hhhccccccceecc---CCh-hHHHHHHHhCCcEeccCCccchhhHHHHHH---hHhcceeec
Q 012412 332 TSHKSLVVSWCPQL---EVLAHEATGCFVTH---CGW-NSTMEALSLGVPMVAMPQWSDQSTNAKYIL---DVWKTGLKF 401 (464)
Q Consensus 332 ~~~nv~~~~~~p~~---~ll~~~~~~~vI~H---gG~-~s~~eal~~GvP~v~~P~~~DQ~~na~rl~---~~~G~g~~l 401 (464)
+.++|.+.+++|+. .+|..+++ +|+- -|+ -++.||+++|+|+|+.-..+. ....++ +. ..|...
T Consensus 303 l~~~V~f~g~v~~~~l~~~l~~adv--~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp---~~~iv~~~~~g-~~G~l~ 376 (419)
T cd03806 303 LEDKVEFVVNAPFEELLEELSTASI--GLHTMWNEHFGIGVVEYMAAGLIPLAHASGGP---LLDIVVPWDGG-PTGFLA 376 (419)
T ss_pred CCCeEEEecCCCHHHHHHHHHhCeE--EEECCccCCcccHHHHHHHcCCcEEEEcCCCC---chheeeccCCC-CceEEe
Confidence 56899999999876 78889998 6642 233 377999999999997543221 112233 45 567665
Q ss_pred cCcCHHHHHHHHHHHhcCC
Q 012412 402 PIVKRDAIADCISEILEGE 420 (464)
Q Consensus 402 ~~~~~~~l~~~i~~ll~~~ 420 (464)
. +++++++++.++++++
T Consensus 377 ~--d~~~la~ai~~ll~~~ 393 (419)
T cd03806 377 S--TAEEYAEAIEKILSLS 393 (419)
T ss_pred C--CHHHHHHHHHHHHhCC
Confidence 3 8999999999999875
|
ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. |
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type | Back alignment and domain information |
|---|
Probab=98.71 E-value=7.1e-06 Score=83.04 Aligned_cols=134 Identities=10% Similarity=0.068 Sum_probs=79.9
Q ss_pred CceEEEEeccccc-CCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhh---hhhccCCCcEEEEeccChH---Hhhcc
Q 012412 278 ESVVYVSYGSFVE-LKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKF---SDETLTSHKSLVVSWCPQL---EVLAH 350 (464)
Q Consensus 278 ~~~v~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~---~~~~~~~~nv~~~~~~p~~---~ll~~ 350 (464)
+.++++..|.+.. -..+.+-..+..+.+.+.++++.-.+. ....+.+ .++ .+.++.+....+.. .+++.
T Consensus 290 ~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~G~g~--~~~~~~l~~~~~~--~~~~v~~~~~~~~~~~~~~~~~ 365 (473)
T TIGR02095 290 DVPLFGVISRLTQQKGVDLLLAALPELLELGGQLVVLGTGD--PELEEALRELAER--YPGNVRVIIGYDEALAHLIYAG 365 (473)
T ss_pred CCCEEEEEecCccccChHHHHHHHHHHHHcCcEEEEECCCC--HHHHHHHHHHHHH--CCCcEEEEEcCCHHHHHHHHHh
Confidence 4467777888762 233443333333433456666554332 1122222 222 45678777655554 68899
Q ss_pred ccccceecc---CChh-HHHHHHHhCCcEeccCCcc--chhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhc
Q 012412 351 EATGCFVTH---CGWN-STMEALSLGVPMVAMPQWS--DQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILE 418 (464)
Q Consensus 351 ~~~~~vI~H---gG~~-s~~eal~~GvP~v~~P~~~--DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~ 418 (464)
+|+ +|.- -|+| +.+||+++|+|+|+....+ |.-.+...-... +.|...+..++++|.++|.+++.
T Consensus 366 aDv--~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~~~~-~~G~l~~~~d~~~la~~i~~~l~ 436 (473)
T TIGR02095 366 ADF--ILMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPEAES-GTGFLFEEYDPGALLAALSRALR 436 (473)
T ss_pred CCE--EEeCCCcCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCCCCC-CceEEeCCCCHHHHHHHHHHHHH
Confidence 999 7742 3444 7799999999999865432 222111101234 66887777789999999999986
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. |
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
Probab=98.67 E-value=7.1e-05 Score=80.21 Aligned_cols=135 Identities=6% Similarity=0.044 Sum_probs=78.2
Q ss_pred ceEEEEecccccCCHHHHHHHHHHHhh---CCCeEEEEEcCcccCcCChh---hhhhcc--CCCcEEEEeccChH---Hh
Q 012412 279 SVVYVSYGSFVELKAEEMEELAWGLKS---SDQHFLWVVRESEQAKLPKK---FSDETL--TSHKSLVVSWCPQL---EV 347 (464)
Q Consensus 279 ~~v~vs~Gs~~~~~~~~~~~~~~al~~---~~~~~i~~~~~~~~~~~~~~---~~~~~~--~~~nv~~~~~~p~~---~l 347 (464)
.++++..|.+. ..+-+..+++|+.. .+.+++++ |.+....+... +.+++. .+++|.+....+.. .+
T Consensus 840 ~plVg~VGRL~--~qKGvdlLi~Al~~ll~~~~qlVIv-G~Gpd~~~e~~l~~La~~Lg~~~~~rV~f~g~~de~lah~i 916 (1036)
T PLN02316 840 LPLVGIITRLT--HQKGIHLIKHAIWRTLERNGQVVLL-GSAPDPRIQNDFVNLANQLHSSHHDRARLCLTYDEPLSHLI 916 (1036)
T ss_pred CeEEEEEeccc--cccCHHHHHHHHHHHhhcCcEEEEE-eCCCCHHHHHHHHHHHHHhCccCCCeEEEEecCCHHHHHHH
Confidence 35666677766 22333344444433 36677654 43211111122 222211 35788887655553 68
Q ss_pred hccccccceecc---CCh-hHHHHHHHhCCcEeccCCcc--chhhH-------HHHHHhHhcceeeccCcCHHHHHHHHH
Q 012412 348 LAHEATGCFVTH---CGW-NSTMEALSLGVPMVAMPQWS--DQSTN-------AKYILDVWKTGLKFPIVKRDAIADCIS 414 (464)
Q Consensus 348 l~~~~~~~vI~H---gG~-~s~~eal~~GvP~v~~P~~~--DQ~~n-------a~rl~~~~G~g~~l~~~~~~~l~~~i~ 414 (464)
++.+|+ |+.- =|+ -+.+||+++|+|.|+....+ |.-.. ++..... +.|...+..+++.|..+|.
T Consensus 917 yaaADi--flmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~-~tGflf~~~d~~aLa~AL~ 993 (1036)
T PLN02316 917 YAGADF--ILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLE-PNGFSFDGADAAGVDYALN 993 (1036)
T ss_pred HHhCcE--EEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccC-CceEEeCCCCHHHHHHHHH
Confidence 999999 8743 233 47799999999988754322 22111 1111113 4677777788999999999
Q ss_pred HHhcC
Q 012412 415 EILEG 419 (464)
Q Consensus 415 ~ll~~ 419 (464)
++|.+
T Consensus 994 raL~~ 998 (1036)
T PLN02316 994 RAISA 998 (1036)
T ss_pred HHHhh
Confidence 99975
|
|
| >PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 | Back alignment and domain information |
|---|
Probab=98.67 E-value=1.4e-07 Score=90.48 Aligned_cols=140 Identities=14% Similarity=0.168 Sum_probs=81.4
Q ss_pred CCCceEEEEecccccCC-H---HHHHHHHHHHhhC-CCeEEEEEcCc--ccCcCChhhhhhccCCCcEEEEeccChH---
Q 012412 276 AKESVVYVSYGSFVELK-A---EEMEELAWGLKSS-DQHFLWVVRES--EQAKLPKKFSDETLTSHKSLVVSWCPQL--- 345 (464)
Q Consensus 276 ~~~~~v~vs~Gs~~~~~-~---~~~~~~~~al~~~-~~~~i~~~~~~--~~~~~~~~~~~~~~~~~nv~~~~~~p~~--- 345 (464)
..++.+++++=...... + ..+..++.++.+. +.++||.++.. ....+.+.+. . . +|+++.+.+++.
T Consensus 178 ~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~~~~~vi~~~hn~p~~~~~i~~~l~-~--~-~~v~~~~~l~~~~~l 253 (346)
T PF02350_consen 178 APKPYILVTLHPVTNEDNPERLEQILEALKALAERQNVPVIFPLHNNPRGSDIIIEKLK-K--Y-DNVRLIEPLGYEEYL 253 (346)
T ss_dssp TTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHHTTEEEEEE--S-HHHHHHHHHHHT-T----TTEEEE----HHHHH
T ss_pred cCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhcCCCcEEEEecCCchHHHHHHHHhc-c--c-CCEEEECCCCHHHHH
Confidence 56789999884444433 3 4455556666555 78899999833 2222222222 1 3 599998766654
Q ss_pred HhhccccccceeccCChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcCCchHHH
Q 012412 346 EVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGERGKEL 425 (464)
Q Consensus 346 ~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~~~~~~~ 425 (464)
.++.++++ +|+-.| |-.-||.++|+|+|.+-...+.+. .... |..+.+ ..+.++|.+++++++.+. .+
T Consensus 254 ~ll~~a~~--vvgdSs-GI~eEa~~lg~P~v~iR~~geRqe----~r~~-~~nvlv-~~~~~~I~~ai~~~l~~~---~~ 321 (346)
T PF02350_consen 254 SLLKNADL--VVGDSS-GIQEEAPSLGKPVVNIRDSGERQE----GRER-GSNVLV-GTDPEAIIQAIEKALSDK---DF 321 (346)
T ss_dssp HHHHHESE--EEESSH-HHHHHGGGGT--EEECSSS-S-HH----HHHT-TSEEEE-TSSHHHHHHHHHHHHH-H---HH
T ss_pred HHHhcceE--EEEcCc-cHHHHHHHhCCeEEEecCCCCCHH----HHhh-cceEEe-CCCHHHHHHHHHHHHhCh---HH
Confidence 88899999 999999 544499999999999833222221 2222 444443 478999999999999874 44
Q ss_pred HHHHHH
Q 012412 426 RRNAGK 431 (464)
Q Consensus 426 ~~~a~~ 431 (464)
.++...
T Consensus 322 ~~~~~~ 327 (346)
T PF02350_consen 322 YRKLKN 327 (346)
T ss_dssp HHHHHC
T ss_pred HHhhcc
Confidence 444433
|
1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C. |
| >PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.66 E-value=6.8e-05 Score=73.55 Aligned_cols=82 Identities=17% Similarity=0.276 Sum_probs=64.3
Q ss_pred CCCcEEEEeccChH---Hhhccccccceecc----CCh-hHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeecc-
Q 012412 332 TSHKSLVVSWCPQL---EVLAHEATGCFVTH----CGW-NSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP- 402 (464)
Q Consensus 332 ~~~nv~~~~~~p~~---~ll~~~~~~~vI~H----gG~-~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~- 402 (464)
...++.+.+++|+. .+++.+|+ +|.. .|+ .++.||+++|+|+|+... ..+...+++. ..|..+.
T Consensus 255 l~~~v~~~G~~~~~~l~~~~~~aDv--~v~pS~~~E~f~~~~lEAma~G~PVI~s~~----gg~~Eiv~~~-~~G~~l~~ 327 (380)
T PRK15484 255 IGDRCIMLGGQPPEKMHNYYPLADL--VVVPSQVEEAFCMVAVEAMAAGKPVLASTK----GGITEFVLEG-ITGYHLAE 327 (380)
T ss_pred cCCcEEEeCCCCHHHHHHHHHhCCE--EEeCCCCccccccHHHHHHHcCCCEEEeCC----CCcHhhcccC-CceEEEeC
Confidence 45789999999865 67999999 7642 444 577899999999998664 3456667777 7787554
Q ss_pred CcCHHHHHHHHHHHhcCC
Q 012412 403 IVKRDAIADCISEILEGE 420 (464)
Q Consensus 403 ~~~~~~l~~~i~~ll~~~ 420 (464)
..+.++++++|.++++|+
T Consensus 328 ~~d~~~la~~I~~ll~d~ 345 (380)
T PRK15484 328 PMTSDSIISDINRTLADP 345 (380)
T ss_pred CCCHHHHHHHHHHHHcCH
Confidence 678999999999999997
|
|
| >PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=98.65 E-value=1.8e-05 Score=79.40 Aligned_cols=180 Identities=13% Similarity=0.103 Sum_probs=96.0
Q ss_pred hHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHh--hC--CCeEEEEEcCcccCcCChhhhhhcc-CC-CcEEEE
Q 012412 266 EACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLK--SS--DQHFLWVVRESEQAKLPKKFSDETL-TS-HKSLVV 339 (464)
Q Consensus 266 ~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~--~~--~~~~i~~~~~~~~~~~~~~~~~~~~-~~-~nv~~~ 339 (464)
++..+.++..+++++|-+-.||-.+.=...+..++++.+ .+ +.++++...... ..+.+.+... .+ -++.+.
T Consensus 401 ~~~r~~lgl~~~~~iIaLLPGSR~~EI~rllPv~l~aa~~~~l~~~l~fvvp~a~~~---~~~~i~~~~~~~~~~~~~ii 477 (608)
T PRK01021 401 LSWKEQLHLPSDKPIVAAFPGSRRGDILRNLTIQVQAFLASSLASTHQLLVSSANPK---YDHLILEVLQQEGCLHSHIV 477 (608)
T ss_pred HHHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHhccCeEEEEecCchh---hHHHHHHHHhhcCCCCeEEe
Confidence 444444444456789999999976433344555666655 33 445655433221 1122222110 11 122333
Q ss_pred eccChHHhhccccccceeccCChhHHHHHHHhCCcEec-cCCccchhhHHHHHHh-----------Hhccee---ec--c
Q 012412 340 SWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVA-MPQWSDQSTNAKYILD-----------VWKTGL---KF--P 402 (464)
Q Consensus 340 ~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~-~P~~~DQ~~na~rl~~-----------~~G~g~---~l--~ 402 (464)
.--...+++..||+ .+.-+|-. +.|+..+|+|||+ .-...=.+.-++++.+ ..|-.+ .+ .
T Consensus 478 ~~~~~~~~m~aaD~--aLaaSGTa-TLEaAL~g~PmVV~YK~s~Lty~Iak~Lvki~i~yIsLpNIIagr~VvPEllqgQ 554 (608)
T PRK01021 478 PSQFRYELMRECDC--ALAKCGTI-VLETALNQTPTIVTCQLRPFDTFLAKYIFKIILPAYSLPNIILGSTIFPEFIGGK 554 (608)
T ss_pred cCcchHHHHHhcCe--eeecCCHH-HHHHHHhCCCEEEEEecCHHHHHHHHHHHhccCCeeehhHHhcCCCcchhhcCCc
Confidence 21012589999999 88877754 5799999999998 3333334455666655 101111 22 2
Q ss_pred -CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 012412 403 -IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLA 458 (464)
Q Consensus 403 -~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l~ 458 (464)
+++++.|++++ ++|.|+ +.+++.++--+++++.. |.+....+|.++-+.
T Consensus 555 ~~~tpe~La~~l-~lL~d~---~~r~~~~~~l~~lr~~L---g~~~~~~~~~~~~~~ 604 (608)
T PRK01021 555 KDFQPEEVAAAL-DILKTS---QSKEKQKDACRDLYQAM---NESASTMKECLSLIF 604 (608)
T ss_pred ccCCHHHHHHHH-HHhcCH---HHHHHHHHHHHHHHHHh---cCCCCCHHHHHHHHH
Confidence 57899999997 888886 33333333333333332 233335555555444
|
|
| >TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing | Back alignment and domain information |
|---|
Probab=98.64 E-value=4e-06 Score=81.43 Aligned_cols=131 Identities=14% Similarity=0.186 Sum_probs=83.0
Q ss_pred CCceEEEEecccc---cCCHHHHHHHHHHHhhCCCeEEEEEcCcc--cCcCChhhhhhccCCCcEEEEeccChH---Hhh
Q 012412 277 KESVVYVSYGSFV---ELKAEEMEELAWGLKSSDQHFLWVVRESE--QAKLPKKFSDETLTSHKSLVVSWCPQL---EVL 348 (464)
Q Consensus 277 ~~~~v~vs~Gs~~---~~~~~~~~~~~~al~~~~~~~i~~~~~~~--~~~~~~~~~~~~~~~~nv~~~~~~p~~---~ll 348 (464)
+++.|++++=... ..+.+.+..+++++.+.+..++++++... ...+.+.+.+.....+|+.+.+.+++. .++
T Consensus 200 ~~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~~~~~~vi~P~~~p~~~~i~~~i~~~~~~~~~v~l~~~l~~~~~l~Ll 279 (365)
T TIGR03568 200 DKPYALVTFHPVTLEKESAEEQIKELLKALDELNKNYIFTYPNADAGSRIINEAIEEYVNEHPNFRLFKSLGQERYLSLL 279 (365)
T ss_pred CCCEEEEEeCCCcccccCchHHHHHHHHHHHHhccCCEEEEeCCCCCchHHHHHHHHHhcCCCCEEEECCCChHHHHHHH
Confidence 3468778775432 34568899999999888766666653321 111122222221014789998765544 889
Q ss_pred ccccccceeccCChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhc
Q 012412 349 AHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILE 418 (464)
Q Consensus 349 ~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~ 418 (464)
.+|++ +|+-++.+. .||.+.|+|+|.+-- -| ...+. |..+.+-..++++|.+++.++++
T Consensus 280 ~~a~~--vitdSSggi-~EA~~lg~Pvv~l~~--R~-----e~~~~-g~nvl~vg~~~~~I~~a~~~~~~ 338 (365)
T TIGR03568 280 KNADA--VIGNSSSGI-IEAPSFGVPTINIGT--RQ-----KGRLR-ADSVIDVDPDKEEIVKAIEKLLD 338 (365)
T ss_pred HhCCE--EEEcChhHH-HhhhhcCCCEEeecC--Cc-----hhhhh-cCeEEEeCCCHHHHHHHHHHHhC
Confidence 99999 998876655 999999999997741 11 11133 33222115789999999999553
|
This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate. |
| >COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.63 E-value=1.4e-05 Score=75.16 Aligned_cols=183 Identities=15% Similarity=0.110 Sum_probs=107.7
Q ss_pred chhHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhh-----CCCeEEEEEcCcccCcCChhhhhhccCCCcEEE
Q 012412 264 STEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKS-----SDQHFLWVVRESEQAKLPKKFSDETLTSHKSLV 338 (464)
Q Consensus 264 ~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~-----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~ 338 (464)
+++.+.+-+....+++++.+-.||-.+.-...+..+.++.++ .+.+|++-+.....+.+..+..+. ....+
T Consensus 174 ~r~~ar~~l~~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~~vlp~~~~~~~~~~~~~~~~----~~~~~ 249 (381)
T COG0763 174 DREAAREKLGIDADEKTLALLPGSRRSEIRRLLPPFVQAAQELKARYPDLKFVLPLVNAKYRRIIEEALKW----EVAGL 249 (381)
T ss_pred cHHHHHHHhCCCCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCceEEEecCcHHHHHHHHHHhhc----cccCc
Confidence 456666666555678899999999763222333334444332 356888777655433333333211 11012
Q ss_pred EeccC-hH--HhhccccccceeccCChhHHHHHHHhCCcEecc-CCccchhhHHHHHHhHhccee--------ecc----
Q 012412 339 VSWCP-QL--EVLAHEATGCFVTHCGWNSTMEALSLGVPMVAM-PQWSDQSTNAKYILDVWKTGL--------KFP---- 402 (464)
Q Consensus 339 ~~~~p-~~--~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~-P~~~DQ~~na~rl~~~~G~g~--------~l~---- 402 (464)
.-++. +. +.+..||+ .+.-+|-. +.|+..+|+|||+. =...=-+.-+.++...|=+++ .++
T Consensus 250 ~~~~~~~~~~~a~~~aD~--al~aSGT~-tLE~aL~g~P~Vv~Yk~~~it~~iak~lvk~~yisLpNIi~~~~ivPEliq 326 (381)
T COG0763 250 SLILIDGEKRKAFAAADA--ALAASGTA-TLEAALAGTPMVVAYKVKPITYFIAKRLVKLPYVSLPNILAGREIVPELIQ 326 (381)
T ss_pred eEEecCchHHHHHHHhhH--HHHhccHH-HHHHHHhCCCEEEEEeccHHHHHHHHHhccCCcccchHHhcCCccchHHHh
Confidence 22222 12 67888888 77776654 47999999999983 222223445556555522221 111
Q ss_pred -CcCHHHHHHHHHHHhcCCc-hHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Q 012412 403 -IVKRDAIADCISEILEGER-GKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASL 457 (464)
Q Consensus 403 -~~~~~~l~~~i~~ll~~~~-~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l 457 (464)
+++++.|.+++..++.|+. ...+++...++++.++ .+++++.+.+.+++.+
T Consensus 327 ~~~~pe~la~~l~~ll~~~~~~~~~~~~~~~l~~~l~----~~~~~e~aA~~vl~~~ 379 (381)
T COG0763 327 EDCTPENLARALEELLLNGDRREALKEKFRELHQYLR----EDPASEIAAQAVLELL 379 (381)
T ss_pred hhcCHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHc----CCcHHHHHHHHHHHHh
Confidence 6889999999999999972 3456666666666666 3446666666666654
|
|
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.61 E-value=5e-05 Score=77.03 Aligned_cols=137 Identities=12% Similarity=0.063 Sum_probs=78.9
Q ss_pred CceEEEEeccccc-CCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhcc-CCCcEEEEeccChH---Hhhcccc
Q 012412 278 ESVVYVSYGSFVE-LKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETL-TSHKSLVVSWCPQL---EVLAHEA 352 (464)
Q Consensus 278 ~~~v~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~nv~~~~~~p~~---~ll~~~~ 352 (464)
+..+++..|.+.. -..+.+-..+..+.+.+.++++.-.+. ....+.+.+... .++|+.+....++. .++..+|
T Consensus 295 ~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~G~g~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~aD 372 (476)
T cd03791 295 DAPLFGFVGRLTEQKGIDLLLEALPELLELGGQLVILGSGD--PEYEEALRELAARYPGRVAVLIGYDEALAHLIYAGAD 372 (476)
T ss_pred CCCEEEEEeeccccccHHHHHHHHHHHHHcCcEEEEEecCC--HHHHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhCC
Confidence 4467778888762 233444444444444456666554332 111122221110 35788765433443 5788999
Q ss_pred ccceecc---CCh-hHHHHHHHhCCcEeccCCcc--chhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcC
Q 012412 353 TGCFVTH---CGW-NSTMEALSLGVPMVAMPQWS--DQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEG 419 (464)
Q Consensus 353 ~~~vI~H---gG~-~s~~eal~~GvP~v~~P~~~--DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~ 419 (464)
+ ++.- -|+ .+.+||+++|+|+|+....+ |.-.+...-.+. |.|..++..++++|.+++.+++..
T Consensus 373 v--~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~-~~G~~~~~~~~~~l~~~i~~~l~~ 442 (476)
T cd03791 373 F--FLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGE-GTGFVFEGYNADALLAALRRALAL 442 (476)
T ss_pred E--EECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCC-CCeEEeCCCCHHHHHHHHHHHHHH
Confidence 9 7742 233 46799999999999865432 221111111134 589888877899999999999853
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| >PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.57 E-value=1.1e-05 Score=77.46 Aligned_cols=162 Identities=22% Similarity=0.195 Sum_probs=94.7
Q ss_pred CCCceEEEEecccccCCHHHHHHHHHHHhh-----CCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEecc-ChHHhhc
Q 012412 276 AKESVVYVSYGSFVELKAEEMEELAWGLKS-----SDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWC-PQLEVLA 349 (464)
Q Consensus 276 ~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~-----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~-p~~~ll~ 349 (464)
+++++|.+-.||-..-=...+..++++.+. .+.++++..........-...... ...++.+.-.. .-.+++.
T Consensus 182 ~~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~~~p~l~fvvp~a~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~~~m~ 259 (373)
T PF02684_consen 182 PDKPIIALLPGSRKSEIKRLLPIFLEAAKLLKKQRPDLQFVVPVAPEVHEELIEEILAE--YPPDVSIVIIEGESYDAMA 259 (373)
T ss_pred CCCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCCHHHHHHHHHHHHh--hCCCCeEEEcCCchHHHHH
Confidence 577899999999763222333344444322 245676665443222111111111 22333333222 3447888
Q ss_pred cccccceeccCChhHHHHHHHhCCcEecc-CCccchhhHHHHHHhHhcc-ee------------ecc-CcCHHHHHHHHH
Q 012412 350 HEATGCFVTHCGWNSTMEALSLGVPMVAM-PQWSDQSTNAKYILDVWKT-GL------------KFP-IVKRDAIADCIS 414 (464)
Q Consensus 350 ~~~~~~vI~HgG~~s~~eal~~GvP~v~~-P~~~DQ~~na~rl~~~~G~-g~------------~l~-~~~~~~l~~~i~ 414 (464)
.+++ .+.-.|- .++|+..+|+|||++ -...=.+.-|+++.+. .- |+ .+. +++++.|.+++.
T Consensus 260 ~ad~--al~~SGT-aTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~-~~isL~Niia~~~v~PEliQ~~~~~~~i~~~~~ 335 (373)
T PF02684_consen 260 AADA--ALAASGT-ATLEAALLGVPMVVAYKVSPLTYFIAKRLVKV-KYISLPNIIAGREVVPELIQEDATPENIAAELL 335 (373)
T ss_pred hCcc--hhhcCCH-HHHHHHHhCCCEEEEEcCcHHHHHHHHHhhcC-CEeechhhhcCCCcchhhhcccCCHHHHHHHHH
Confidence 8998 7776664 458999999999883 3333455666776554 21 11 111 799999999999
Q ss_pred HHhcCCchHHHHHHHHHHHHHHHHHHHcCCCc
Q 012412 415 EILEGERGKELRRNAGKWRKLAKEAVAKGGSS 446 (464)
Q Consensus 415 ~ll~~~~~~~~~~~a~~l~~~~~~~~~~gg~~ 446 (464)
++|.|+ +.++......+.+++....|.++
T Consensus 336 ~ll~~~---~~~~~~~~~~~~~~~~~~~~~~~ 364 (373)
T PF02684_consen 336 ELLENP---EKRKKQKELFREIRQLLGPGASS 364 (373)
T ss_pred HHhcCH---HHHHHHHHHHHHHHHhhhhccCC
Confidence 999997 44555555556666554445544
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process |
| >TIGR02918 accessory Sec system glycosylation protein GtfA | Back alignment and domain information |
|---|
Probab=98.57 E-value=1.3e-05 Score=80.91 Aligned_cols=148 Identities=18% Similarity=0.184 Sum_probs=91.8
Q ss_pred ceEEEEecccccCCHHHHHHHHHHHh----hC-CCeEEEEEcCccc-CcCChhhhhhccCCCcEEEEeccChHHhhcccc
Q 012412 279 SVVYVSYGSFVELKAEEMEELAWGLK----SS-DQHFLWVVRESEQ-AKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEA 352 (464)
Q Consensus 279 ~~v~vs~Gs~~~~~~~~~~~~~~al~----~~-~~~~i~~~~~~~~-~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~ 352 (464)
+.++++.|... +.+.+..+++|++ +. +.++++ +|.+.. +.+ .++.+.+...++|.+.++.+...++..++
T Consensus 319 ~~~il~vGrl~--~~Kg~~~li~A~~~l~~~~p~~~l~i-~G~G~~~~~l-~~~i~~~~l~~~V~f~G~~~~~~~~~~ad 394 (500)
T TIGR02918 319 PFSIITASRLA--KEKHIDWLVKAVVKAKKSVPELTFDI-YGEGGEKQKL-QKIINENQAQDYIHLKGHRNLSEVYKDYE 394 (500)
T ss_pred CeEEEEEeccc--cccCHHHHHHHHHHHHhhCCCeEEEE-EECchhHHHH-HHHHHHcCCCCeEEEcCCCCHHHHHHhCC
Confidence 45677788876 3344444555443 32 334333 443321 112 12222222457899999998889999999
Q ss_pred ccceec---cCCh-hHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeecc-C---cC----HHHHHHHHHHHhcCC
Q 012412 353 TGCFVT---HCGW-NSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP-I---VK----RDAIADCISEILEGE 420 (464)
Q Consensus 353 ~~~vI~---HgG~-~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~-~---~~----~~~l~~~i~~ll~~~ 420 (464)
+ +|. .-|+ .+++||+++|+|+|+.... ..+...+++. ..|..++ . -+ .++|+++|.++++++
T Consensus 395 v--~v~pS~~Egfgl~~lEAma~G~PVI~~dv~---~G~~eiI~~g-~nG~lv~~~~~~~d~~~~~~~la~~I~~ll~~~ 468 (500)
T TIGR02918 395 L--YLSASTSEGFGLTLMEAVGSGLGMIGFDVN---YGNPTFIEDN-KNGYLIPIDEEEDDEDQIITALAEKIVEYFNSN 468 (500)
T ss_pred E--EEEcCccccccHHHHHHHHhCCCEEEecCC---CCCHHHccCC-CCEEEEeCCccccchhHHHHHHHHHHHHHhChH
Confidence 9 774 3444 5889999999999975532 1355566666 6787775 2 22 788999999999654
Q ss_pred chHHHHHHHHHHHHHH
Q 012412 421 RGKELRRNAGKWRKLA 436 (464)
Q Consensus 421 ~~~~~~~~a~~l~~~~ 436 (464)
....+.+++.+.++.+
T Consensus 469 ~~~~~~~~a~~~a~~f 484 (500)
T TIGR02918 469 DIDAFHEYSYQIAEGF 484 (500)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 3345666666655444
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. |
| >PLN02846 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=98.52 E-value=3.1e-05 Score=76.62 Aligned_cols=124 Identities=14% Similarity=0.059 Sum_probs=75.0
Q ss_pred EEEEecccccCCHHHHHHHHHHHhh----C-CCeEEEEEcCcccCcCChhhhhhcc-CCCcE-EEEeccChHHhhccccc
Q 012412 281 VYVSYGSFVELKAEEMEELAWGLKS----S-DQHFLWVVRESEQAKLPKKFSDETL-TSHKS-LVVSWCPQLEVLAHEAT 353 (464)
Q Consensus 281 v~vs~Gs~~~~~~~~~~~~~~al~~----~-~~~~i~~~~~~~~~~~~~~~~~~~~-~~~nv-~~~~~~p~~~ll~~~~~ 353 (464)
+++..|... ..+-+..++++++. . +.++++ +|.+. ..+++.+... ..-++ .+.++....+++..+|+
T Consensus 230 ~~l~vGRL~--~eK~~~~Li~a~~~l~~~~~~~~l~i-vGdGp---~~~~L~~~a~~l~l~~~vf~G~~~~~~~~~~~Dv 303 (462)
T PLN02846 230 GAYYIGKMV--WSKGYKELLKLLHKHQKELSGLEVDL-YGSGE---DSDEVKAAAEKLELDVRVYPGRDHADPLFHDYKV 303 (462)
T ss_pred EEEEEecCc--ccCCHHHHHHHHHHHHhhCCCeEEEE-ECCCc---cHHHHHHHHHhcCCcEEEECCCCCHHHHHHhCCE
Confidence 556677766 34445555555443 2 334443 44432 2223322110 11122 35567677789999999
Q ss_pred cceeccC----ChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcCC
Q 012412 354 GCFVTHC----GWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGE 420 (464)
Q Consensus 354 ~~vI~Hg----G~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~~ 420 (464)
||.-+ =..++.||+++|+|+|+.-... + ..+.+- +.|... -+.+++.+++.++|.++
T Consensus 304 --Fv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~----~-~~v~~~-~ng~~~--~~~~~~a~ai~~~l~~~ 364 (462)
T PLN02846 304 --FLNPSTTDVVCTTTAEALAMGKIVVCANHPS----N-EFFKQF-PNCRTY--DDGKGFVRATLKALAEE 364 (462)
T ss_pred --EEECCCcccchHHHHHHHHcCCcEEEecCCC----c-ceeecC-CceEec--CCHHHHHHHHHHHHccC
Confidence 88663 3467899999999999865432 2 445445 556555 37889999999999864
|
|
| >cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=98.50 E-value=0.00017 Score=70.55 Aligned_cols=125 Identities=20% Similarity=0.146 Sum_probs=73.9
Q ss_pred eEEEEeccccc-CCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChH---Hhhccccccc
Q 012412 280 VVYVSYGSFVE-LKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQL---EVLAHEATGC 355 (464)
Q Consensus 280 ~v~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~---~ll~~~~~~~ 355 (464)
++++.+|++.. ...+.+..++.. ..+..++++-.+.... ....+. ..+||.+.+++|+. .++..+|+.+
T Consensus 206 ~~i~y~G~l~~~~d~~ll~~la~~--~p~~~~vliG~~~~~~-~~~~~~----~~~nV~~~G~~~~~~l~~~l~~~Dv~l 278 (373)
T cd04950 206 PVIGYYGAIAEWLDLELLEALAKA--RPDWSFVLIGPVDVSI-DPSALL----RLPNVHYLGPKPYKELPAYLAGFDVAI 278 (373)
T ss_pred CEEEEEeccccccCHHHHHHHHHH--CCCCEEEEECCCcCcc-ChhHhc----cCCCEEEeCCCCHHHHHHHHHhCCEEe
Confidence 46677788863 334444433332 2345655544331111 111111 34899999999976 6788899833
Q ss_pred ee------ccCCh-hHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcCC
Q 012412 356 FV------THCGW-NSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGE 420 (464)
Q Consensus 356 vI------~HgG~-~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~~ 420 (464)
+- +.++. +.+.|++++|+|+|..++ ...++.. + |..+..-+.+++.++|++++.++
T Consensus 279 ~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~-------~~~~~~~-~-~~~~~~~d~~~~~~ai~~~l~~~ 341 (373)
T cd04950 279 LPFRLNELTRATSPLKLFEYLAAGKPVVATPL-------PEVRRYE-D-EVVLIADDPEEFVAAIEKALLED 341 (373)
T ss_pred cCCccchhhhcCCcchHHHHhccCCCEEecCc-------HHHHhhc-C-cEEEeCCCHHHHHHHHHHHHhcC
Confidence 22 22333 458999999999998763 2223333 4 33333347999999999987553
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Probab=98.45 E-value=2.8e-05 Score=76.07 Aligned_cols=151 Identities=19% Similarity=0.224 Sum_probs=93.7
Q ss_pred ceEEEEecccccCCHHHHHHHHHHHhh-----CCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChH-Hhhcccc
Q 012412 279 SVVYVSYGSFVELKAEEMEELAWGLKS-----SDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQL-EVLAHEA 352 (464)
Q Consensus 279 ~~v~vs~Gs~~~~~~~~~~~~~~al~~-----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~-~ll~~~~ 352 (464)
+..+++.|... +.+.+..++++++. .+.++++...+.....+ ....+....++++.+.++.++. .++..++
T Consensus 204 ~~~i~~vgrl~--~~K~~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~-~~~~~~~~~~~~v~~~g~~~~~~~~~~~ad 280 (372)
T cd04949 204 PHKIITVARLA--PEKQLDQLIKAFAKVVKQVPDATLDIYGYGDEEEKL-KELIEELGLEDYVFLKGYTRDLDEVYQKAQ 280 (372)
T ss_pred CCeEEEEEccC--cccCHHHHHHHHHHHHHhCCCcEEEEEEeCchHHHH-HHHHHHcCCcceEEEcCCCCCHHHHHhhhh
Confidence 34567777765 33333344444332 24566655443322212 1222222256789998887665 8899999
Q ss_pred ccceeccC-C-hhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcCCc-hHHHHHHH
Q 012412 353 TGCFVTHC-G-WNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGER-GKELRRNA 429 (464)
Q Consensus 353 ~~~vI~Hg-G-~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~~~-~~~~~~~a 429 (464)
+-++.++. | ..++.||+++|+|+|+..... .....+++. ..|..++..+.++++++|.+++.|++ .+++.+++
T Consensus 281 ~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~---g~~~~v~~~-~~G~lv~~~d~~~la~~i~~ll~~~~~~~~~~~~a 356 (372)
T cd04949 281 LSLLTSQSEGFGLSLMEALSHGLPVISYDVNY---GPSEIIEDG-ENGYLVPKGDIEALAEAIIELLNDPKLLQKFSEAA 356 (372)
T ss_pred EEEecccccccChHHHHHHhCCCCEEEecCCC---CcHHHcccC-CCceEeCCCcHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence 93344442 3 458999999999999864321 245556666 78888877789999999999999862 24455555
Q ss_pred HHHHHHH
Q 012412 430 GKWRKLA 436 (464)
Q Consensus 430 ~~l~~~~ 436 (464)
.+.++.+
T Consensus 357 ~~~~~~~ 363 (372)
T cd04949 357 YENAERY 363 (372)
T ss_pred HHHHHHh
Confidence 5554443
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra |
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.41 E-value=9.7e-05 Score=74.75 Aligned_cols=135 Identities=17% Similarity=0.200 Sum_probs=85.1
Q ss_pred CCceEEEEecccccCCHHHHHHHHHHH---h-hC-CCeEEEEEcCcc-cCcCCh---hhhhhccCCCcEEEEeccChHHh
Q 012412 277 KESVVYVSYGSFVELKAEEMEELAWGL---K-SS-DQHFLWVVRESE-QAKLPK---KFSDETLTSHKSLVVSWCPQLEV 347 (464)
Q Consensus 277 ~~~~v~vs~Gs~~~~~~~~~~~~~~al---~-~~-~~~~i~~~~~~~-~~~~~~---~~~~~~~~~~nv~~~~~~p~~~l 347 (464)
+++.+++..|... +.+-+..+++++ . +. +.++++ +|+.. .....+ ++.+++...+||.+.+.....++
T Consensus 291 ~~~~~i~~vGrl~--~~Kg~~~li~a~~~l~~~~p~~~l~I-vG~g~~~~~~~~e~~~li~~l~l~~~V~f~G~~~v~~~ 367 (475)
T cd03813 291 KEPPVVGLIGRVV--PIKDIKTFIRAAAIVRKKIPDAEGWV-IGPTDEDPEYAEECRELVESLGLEDNVKFTGFQNVKEY 367 (475)
T ss_pred CCCcEEEEEeccc--cccCHHHHHHHHHHHHHhCCCeEEEE-ECCCCcChHHHHHHHHHHHHhCCCCeEEEcCCccHHHH
Confidence 3456777788876 223333333333 2 22 344443 44321 111111 22233335689999996666699
Q ss_pred hccccccceecc----CChhHHHHHHHhCCcEeccCCccchhhHHHHHHhH----h-cceeeccCcCHHHHHHHHHHHhc
Q 012412 348 LAHEATGCFVTH----CGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDV----W-KTGLKFPIVKRDAIADCISEILE 418 (464)
Q Consensus 348 l~~~~~~~vI~H----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~----~-G~g~~l~~~~~~~l~~~i~~ll~ 418 (464)
++.+|+ +|.- |-..++.||+++|+|+|+. |.......+++. . ..|...+..+.+++++++.++++
T Consensus 368 l~~aDv--~vlpS~~Eg~p~~vlEAma~G~PVVat----d~g~~~elv~~~~~~~~g~~G~lv~~~d~~~la~ai~~ll~ 441 (475)
T cd03813 368 LPKLDV--LVLTSISEGQPLVILEAMAAGIPVVAT----DVGSCRELIEGADDEALGPAGEVVPPADPEALARAILRLLK 441 (475)
T ss_pred HHhCCE--EEeCchhhcCChHHHHHHHcCCCEEEC----CCCChHHHhcCCcccccCCceEEECCCCHHHHHHHHHHHhc
Confidence 999999 6633 2346899999999999984 344556666662 0 26777777789999999999999
Q ss_pred CC
Q 012412 419 GE 420 (464)
Q Consensus 419 ~~ 420 (464)
|+
T Consensus 442 ~~ 443 (475)
T cd03813 442 DP 443 (475)
T ss_pred CH
Confidence 86
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.41 E-value=4.5e-05 Score=71.92 Aligned_cols=336 Identities=15% Similarity=0.159 Sum_probs=178.4
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCC-CeEEEEeCcccc--cccccCCCCCCceEEEcc-CCCCCCCCCCccCHHH
Q 012412 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKG-IKVTLVTTRFFY--KSLHRDSSSSSIPLEAIS-DGYDEGGYAQAESIEA 87 (464)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~rG-h~V~~~~~~~~~--~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~ 87 (464)
+++||+++ +|++=.+.-+-+|.+++.+.+ .+..++.+..+. +... ..+....++ ..+.-.-.....++.+
T Consensus 2 ~~~Kv~~I-~GTRPE~iKmapli~~~~~~~~~~~~vi~TGQH~d~em~~-----~~le~~~i~~pdy~L~i~~~~~tl~~ 75 (383)
T COG0381 2 KMLKVLTI-FGTRPEAIKMAPLVKALEKDPDFELIVIHTGQHRDYEMLD-----QVLELFGIRKPDYDLNIMKPGQTLGE 75 (383)
T ss_pred CceEEEEE-EecCHHHHHHhHHHHHHHhCCCCceEEEEecccccHHHHH-----HHHHHhCCCCCCcchhccccCCCHHH
Confidence 45677655 467788999999999999987 788888887777 3333 122222333 1121101122344444
Q ss_pred HHHHHHHhCcHHHHHHHHHhcCCCCCccEEEe--CCch-hhHHHHHHHcCCccEEEecchHHHHHHHhhhhcCcccCCCC
Q 012412 88 YLERFWQIGPQTLTELVEKMNGSDSPVDCIVY--DSIL-LWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLT 164 (464)
Q Consensus 88 ~~~~~~~~~~~~l~~~~~~l~~~~~p~DlVI~--D~~~-~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p~~ 164 (464)
....... .+.+++++. +| |+|+. |-.+ .+++.+|...+||+.-+...-
T Consensus 76 ~t~~~i~----~~~~vl~~~----kP-D~VlVhGDT~t~lA~alaa~~~~IpV~HvEAGl-------------------- 126 (383)
T COG0381 76 ITGNIIE----GLSKVLEEE----KP-DLVLVHGDTNTTLAGALAAFYLKIPVGHVEAGL-------------------- 126 (383)
T ss_pred HHHHHHH----HHHHHHHhh----CC-CEEEEeCCcchHHHHHHHHHHhCCceEEEeccc--------------------
Confidence 4433332 344555543 56 99987 4333 667899999999977654332
Q ss_pred CCceeCCCCCCCCCCCCCCccccCCCCchHHHHHHHHHhhhccCCcEEEecchhhhhHHHHHHHHhcC---CeeeecccC
Q 012412 165 GNEILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTW---SLRTIGPTI 241 (464)
Q Consensus 165 ~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~---~~~~vgp~~ 241 (464)
...... +++. .++.+. ... ++..++++-..- -++++.-. .++.+|-..
T Consensus 127 ---------Rt~~~~-~PEE---------~NR~l~-~~~-----S~~hfapte~ar----~nLl~EG~~~~~IfvtGnt~ 177 (383)
T COG0381 127 ---------RTGDLY-FPEE---------INRRLT-SHL-----SDLHFAPTEIAR----KNLLREGVPEKRIFVTGNTV 177 (383)
T ss_pred ---------ccCCCC-CcHH---------HHHHHH-HHh-----hhhhcCChHHHH----HHHHHcCCCccceEEeCChH
Confidence 001100 1110 111111 000 112222221111 11111111 144444222
Q ss_pred CCccccccccCcccccccccccchhHHH-HHhhcCCCCceEEEEecccccCC---HHHHHHHHHHHhhC-CCeEEEEEcC
Q 012412 242 PSFYLDKQIEDDKDYGFSMFKSSTEACM-KWLNDRAKESVVYVSYGSFVELK---AEEMEELAWGLKSS-DQHFLWVVRE 316 (464)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~v~vs~Gs~~~~~---~~~~~~~~~al~~~-~~~~i~~~~~ 316 (464)
.+.....+.. ...+.... ..+.. ..+..|++|+=...+.. .+.+..+.+.+++. +..+|..++.
T Consensus 178 iDal~~~~~~----------~~~~~~~~~~~~~~-~~~~~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~viyp~H~ 246 (383)
T COG0381 178 IDALLNTRDR----------VLEDSKILAKGLDD-KDKKYILVTAHRRENVGEPLEEICEALREIAEEYPDVIVIYPVHP 246 (383)
T ss_pred HHHHHHHHhh----------hccchhhHHhhhcc-ccCcEEEEEcchhhcccccHHHHHHHHHHHHHhCCCceEEEeCCC
Confidence 2211000000 00011111 11222 34568888765444333 23334444455555 5566666555
Q ss_pred cccCcCChhhhhhccCCCcEEEE---eccChHHhhccccccceeccCChhHHHHHHHhCCcEeccCCccchhhHHHHHHh
Q 012412 317 SEQAKLPKKFSDETLTSHKSLVV---SWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILD 393 (464)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~nv~~~---~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~ 393 (464)
.. .+.+-...++...+|+++. +|.++..++.++.+ ++|-.|. -.-||-..|+|++++-..-|++. ..+
T Consensus 247 ~~--~v~e~~~~~L~~~~~v~li~pl~~~~f~~L~~~a~~--iltDSGg-iqEEAp~lg~Pvl~lR~~TERPE----~v~ 317 (383)
T COG0381 247 RP--RVRELVLKRLKNVERVKLIDPLGYLDFHNLMKNAFL--ILTDSGG-IQEEAPSLGKPVLVLRDTTERPE----GVE 317 (383)
T ss_pred Ch--hhhHHHHHHhCCCCcEEEeCCcchHHHHHHHHhceE--EEecCCc-hhhhHHhcCCcEEeeccCCCCcc----cee
Confidence 41 1111112332234578887 47788899999998 9988663 45799999999999998888887 222
Q ss_pred Hhcceeecc-CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHH
Q 012412 394 VWKTGLKFP-IVKRDAIADCISEILEGERGKELRRNAGKWRKLAK 437 (464)
Q Consensus 394 ~~G~g~~l~-~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~ 437 (464)
. |-..- ..+.+.+.+++..+++++ ++.++......-.-
T Consensus 318 a---gt~~lvg~~~~~i~~~~~~ll~~~---~~~~~m~~~~npYg 356 (383)
T COG0381 318 A---GTNILVGTDEENILDAATELLEDE---EFYERMSNAKNPYG 356 (383)
T ss_pred c---CceEEeCccHHHHHHHHHHHhhCh---HHHHHHhcccCCCc
Confidence 3 33333 577899999999999997 77776665555544
|
|
| >PRK10017 colanic acid biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=98.41 E-value=0.0015 Score=64.33 Aligned_cols=177 Identities=8% Similarity=0.113 Sum_probs=107.8
Q ss_pred HHHhhcCCCCceEEEEecccccC------C-H---HHHHHHHHHHhhCCCeEEEEEcCcc-------cCcCChhhhhhcc
Q 012412 269 MKWLNDRAKESVVYVSYGSFVEL------K-A---EEMEELAWGLKSSDQHFLWVVRESE-------QAKLPKKFSDETL 331 (464)
Q Consensus 269 ~~~l~~~~~~~~v~vs~Gs~~~~------~-~---~~~~~~~~al~~~~~~~i~~~~~~~-------~~~~~~~~~~~~~ 331 (464)
..|+.....+++|.|+.-..... . . +.+..+++.+.+.|+++++.-...+ ......++.+.+.
T Consensus 225 ~~~~~~~~~~~~Vgisvr~~~~~~~~~~~~~~~Y~~~la~~i~~Li~~g~~Vv~lp~~~~~~~~~~dD~~~~~~l~~~~~ 304 (426)
T PRK10017 225 QHWLDVAAQQKTVAITLRELAPFDKRLGTTQQAYEKAFAGVVNRIIDEGYQVIALSTCTGIDSYNKDDRMVALNLRQHVS 304 (426)
T ss_pred hhhhcccccCCEEEEEecccccccccccccHHHHHHHHHHHHHHHHHCCCeEEEEecccCccCCCCchHHHHHHHHHhcc
Confidence 44554433456888886543311 1 2 2333444545455888776654311 0111123334322
Q ss_pred CCCcEEEE--eccChH--HhhccccccceeccCChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceee-cc--Cc
Q 012412 332 TSHKSLVV--SWCPQL--EVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLK-FP--IV 404 (464)
Q Consensus 332 ~~~nv~~~--~~~p~~--~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~-l~--~~ 404 (464)
.++++++. ++-|.+ .++.+|++ +|.. =.=++.-|+..|||.+.++.. +-....+++. |.... .+ ++
T Consensus 305 ~~~~~~vi~~~~~~~e~~~iIs~~dl--~ig~-RlHa~I~a~~~gvP~i~i~Y~---~K~~~~~~~l-g~~~~~~~~~~l 377 (426)
T PRK10017 305 DPARYHVVMDELNDLEMGKILGACEL--TVGT-RLHSAIISMNFGTPAIAINYE---HKSAGIMQQL-GLPEMAIDIRHL 377 (426)
T ss_pred cccceeEecCCCChHHHHHHHhhCCE--EEEe-cchHHHHHHHcCCCEEEeeeh---HHHHHHHHHc-CCccEEechhhC
Confidence 23444443 233444 88999999 8865 333566789999999999962 4445556777 87755 44 88
Q ss_pred CHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHhh
Q 012412 405 KRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLACS 460 (464)
Q Consensus 405 ~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l~~~ 460 (464)
+.++|.+.++++++|. +++++..++.-++++.. ..+.+.++++++.+.
T Consensus 378 ~~~~Li~~v~~~~~~r--~~~~~~l~~~v~~~r~~------~~~~~~~~~~~~~~~ 425 (426)
T PRK10017 378 LDGSLQAMVADTLGQL--PALNARLAEAVSRERQT------GMQMVQSVLERIGEV 425 (426)
T ss_pred CHHHHHHHHHHHHhCH--HHHHHHHHHHHHHHHHH------HHHHHHHHHHHhccC
Confidence 9999999999999985 35666666666666543 456777888777653
|
|
| >PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.40 E-value=4.4e-06 Score=71.99 Aligned_cols=138 Identities=21% Similarity=0.237 Sum_probs=89.2
Q ss_pred CCCceEEEEeccccc-CCHHHHHHHHHHHh-h-CCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChH---Hhhc
Q 012412 276 AKESVVYVSYGSFVE-LKAEEMEELAWGLK-S-SDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQL---EVLA 349 (464)
Q Consensus 276 ~~~~~v~vs~Gs~~~-~~~~~~~~~~~al~-~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~---~ll~ 349 (464)
..++.+++..|+... -..+.+-.++.-+. + .+.-.++.+|............+.....+++.+.+++++. .++.
T Consensus 12 ~~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~ 91 (172)
T PF00534_consen 12 PDKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYKLVIVGDGEYKKELKNLIEKLNLKENIIFLGYVPDDELDELYK 91 (172)
T ss_dssp -TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEEEEEESHCCHHHHHHHHHHHTTCGTTEEEEESHSHHHHHHHHH
T ss_pred CCCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeEEEEEcccccccccccccccccccccccccccccccccccccc
Confidence 356678888888763 23333333333332 1 2333444444221111112222222256899999999833 8889
Q ss_pred cccccceecc----CChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcCC
Q 012412 350 HEATGCFVTH----CGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGE 420 (464)
Q Consensus 350 ~~~~~~vI~H----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~~ 420 (464)
.+++ +|+. |...++.||+++|+|+|+. +...+...+.+. +.|..++..+.+++.++|.+++.++
T Consensus 92 ~~di--~v~~s~~e~~~~~~~Ea~~~g~pvI~~----~~~~~~e~~~~~-~~g~~~~~~~~~~l~~~i~~~l~~~ 159 (172)
T PF00534_consen 92 SSDI--FVSPSRNEGFGLSLLEAMACGCPVIAS----DIGGNNEIINDG-VNGFLFDPNDIEELADAIEKLLNDP 159 (172)
T ss_dssp HTSE--EEE-BSSBSS-HHHHHHHHTT-EEEEE----SSTHHHHHSGTT-TSEEEESTTSHHHHHHHHHHHHHHH
T ss_pred ccee--ccccccccccccccccccccccceeec----cccCCceeeccc-cceEEeCCCCHHHHHHHHHHHHCCH
Confidence 9999 8866 5677999999999999963 466777777788 8899998559999999999999885
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B .... |
| >PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=98.32 E-value=0.00042 Score=69.44 Aligned_cols=126 Identities=17% Similarity=0.163 Sum_probs=79.3
Q ss_pred eEEEEecccc--cCCHHHHHHHHHHHhhC-CCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChH-Hhhccccccc
Q 012412 280 VVYVSYGSFV--ELKAEEMEELAWGLKSS-DQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQL-EVLAHEATGC 355 (464)
Q Consensus 280 ~v~vs~Gs~~--~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~-~ll~~~~~~~ 355 (464)
.++.+.|.+. .....+++.+...++.. +.+++++-.+...+.+ ....+.+...++|.+.+|..+. .+|..+|+
T Consensus 399 ~vIg~VgRl~~~Kg~~~LI~A~a~llk~~pdirLvIVGdG~~~eeL-k~la~elgL~d~V~FlG~~~Dv~~~LaaADV-- 475 (578)
T PRK15490 399 TTIGGVFRFVGDKNPFAWIDFAARYLQHHPATRFVLVGDGDLRAEA-QKRAEQLGILERILFVGASRDVGYWLQKMNV-- 475 (578)
T ss_pred cEEEEEEEEehhcCHHHHHHHHHHHHhHCCCeEEEEEeCchhHHHH-HHHHHHcCCCCcEEECCChhhHHHHHHhCCE--
Confidence 4556666655 23445555555555543 4455554433221112 1222222256899999997654 88999999
Q ss_pred eec---cCC-hhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHH
Q 012412 356 FVT---HCG-WNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCI 413 (464)
Q Consensus 356 vI~---HgG-~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i 413 (464)
||. +-| .+++.||+++|+|+|+... ..+...+.+. ..|..++..+.+.+.+++
T Consensus 476 fVlPS~~EGfp~vlLEAMA~GlPVVATdv----GG~~EiV~dG-~nG~LVp~~D~~aLa~ai 532 (578)
T PRK15490 476 FILFSRYEGLPNVLIEAQMVGVPVISTPA----GGSAECFIEG-VSGFILDDAQTVNLDQAC 532 (578)
T ss_pred EEEcccccCccHHHHHHHHhCCCEEEeCC----CCcHHHcccC-CcEEEECCCChhhHHHHH
Confidence 885 345 4689999999999997653 4567777777 889888844566666555
|
|
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=98.31 E-value=0.0011 Score=70.25 Aligned_cols=134 Identities=8% Similarity=0.133 Sum_probs=79.6
Q ss_pred ceEEEEecccccCCHHHHHHHHHHHh---hCCCeEEEEEcCcccCcCC---hhhhhhccCCCcEEEEeccChH---Hhhc
Q 012412 279 SVVYVSYGSFVELKAEEMEELAWGLK---SSDQHFLWVVRESEQAKLP---KKFSDETLTSHKSLVVSWCPQL---EVLA 349 (464)
Q Consensus 279 ~~v~vs~Gs~~~~~~~~~~~~~~al~---~~~~~~i~~~~~~~~~~~~---~~~~~~~~~~~nv~~~~~~p~~---~ll~ 349 (464)
.+++...|.+.. .+-+..+++++. ..+.+++++-.+.. .... ..+.+++...++|.+..+.+.. .+++
T Consensus 779 ~pLIg~VGRL~~--QKGiDlLleA~~~Ll~~dvqLVIvGdGp~-~~~e~eL~~La~~l~l~drV~FlG~~de~lah~IYA 855 (977)
T PLN02939 779 QPLVGCITRLVP--QKGVHLIRHAIYKTAELGGQFVLLGSSPV-PHIQREFEGIADQFQSNNNIRLILKYDEALSHSIYA 855 (977)
T ss_pred ceEEEEeecCCc--ccChHHHHHHHHHHhhcCCEEEEEeCCCc-HHHHHHHHHHHHHcCCCCeEEEEeccCHHHHHHHHH
Confidence 356777777762 233333334332 34667655543321 1111 1223332245789999888764 6899
Q ss_pred cccccceecc---CC-hhHHHHHHHhCCcEeccCCcc--chhhH--HH-HHHhHhcceeeccCcCHHHHHHHHHHHhc
Q 012412 350 HEATGCFVTH---CG-WNSTMEALSLGVPMVAMPQWS--DQSTN--AK-YILDVWKTGLKFPIVKRDAIADCISEILE 418 (464)
Q Consensus 350 ~~~~~~vI~H---gG-~~s~~eal~~GvP~v~~P~~~--DQ~~n--a~-rl~~~~G~g~~l~~~~~~~l~~~i~~ll~ 418 (464)
.+|+ ||.- =| ..+.+||+++|+|.|+....+ |.-.+ .. ..++. +-|...+..+++.|..+|.+++.
T Consensus 856 aADI--FLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg-~NGfLf~~~D~eaLa~AL~rAL~ 930 (977)
T PLN02939 856 ASDM--FIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVEL-RNGFTFLTPDEQGLNSALERAFN 930 (977)
T ss_pred hCCE--EEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCC-CceEEecCCCHHHHHHHHHHHHH
Confidence 9999 8843 23 347899999999999865433 22111 11 11224 56777776789999999988874
|
|
| >PRK10125 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=98.29 E-value=0.0012 Score=65.27 Aligned_cols=116 Identities=13% Similarity=0.068 Sum_probs=71.3
Q ss_pred eEEEEecccccCCHHHHHHHHHHHhhCCCeEE-EEEcCcccCcCChhhhhhccCCCcEEEEeccCh----HHhhcccccc
Q 012412 280 VVYVSYGSFVELKAEEMEELAWGLKSSDQHFL-WVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQ----LEVLAHEATG 354 (464)
Q Consensus 280 ~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i-~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~----~~ll~~~~~~ 354 (464)
.+++..|.......+-...+++|++.++..+. +.+|.... . ..+++...++... ..++..+|+
T Consensus 242 ~~il~v~~~~~~~~Kg~~~li~A~~~l~~~~~L~ivG~g~~----~-------~~~~v~~~g~~~~~~~l~~~y~~aDv- 309 (405)
T PRK10125 242 PKIAVVAHDLRYDGKTDQQLVREMMALGDKIELHTFGKFSP----F-------TAGNVVNHGFETDKRKLMSALNQMDA- 309 (405)
T ss_pred CEEEEEEeccccCCccHHHHHHHHHhCCCCeEEEEEcCCCc----c-------cccceEEecCcCCHHHHHHHHHhCCE-
Confidence 34455555332233445678888877654433 33333211 1 2356766776632 366778999
Q ss_pred ceeccC----ChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHH
Q 012412 355 CFVTHC----GWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCIS 414 (464)
Q Consensus 355 ~vI~Hg----G~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~ 414 (464)
||.-. -..++.||+++|+|+|+....+ ..+ +.+. +.|..++.-+.++|++.++
T Consensus 310 -fV~pS~~Egfp~vilEAmA~G~PVVat~~gG----~~E-iv~~-~~G~lv~~~d~~~La~~~~ 366 (405)
T PRK10125 310 -LVFSSRVDNYPLILCEALSIGVPVIATHSDA----ARE-VLQK-SGGKTVSEEEVLQLAQLSK 366 (405)
T ss_pred -EEECCccccCcCHHHHHHHcCCCEEEeCCCC----hHH-hEeC-CcEEEECCCCHHHHHhccC
Confidence 87532 2357899999999999877543 233 3345 6688888668888887643
|
|
| >PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A | Back alignment and domain information |
|---|
Probab=98.12 E-value=5.3e-05 Score=74.32 Aligned_cols=141 Identities=17% Similarity=0.304 Sum_probs=84.5
Q ss_pred CCCceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEEcCcccC--cCChhhhhhccCCCcEEEEeccChHH---hhcc
Q 012412 276 AKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQA--KLPKKFSDETLTSHKSLVVSWCPQLE---VLAH 350 (464)
Q Consensus 276 ~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~nv~~~~~~p~~~---ll~~ 350 (464)
+++.++|.+|.......++.++.-.+.|++.+...+|........ .+...+.+....++++.+.++.|..+ .+..
T Consensus 282 p~d~vvF~~fn~~~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~~~~~~l~~~~~~~Gv~~~Ri~f~~~~~~~ehl~~~~~ 361 (468)
T PF13844_consen 282 PEDAVVFGSFNNLFKISPETLDLWARILKAVPNSRLWLLRFPASGEARLRRRFAAHGVDPDRIIFSPVAPREEHLRRYQL 361 (468)
T ss_dssp -SSSEEEEE-S-GGG--HHHHHHHHHHHHHSTTEEEEEEETSTTHHHHHHHHHHHTTS-GGGEEEEE---HHHHHHHGGG
T ss_pred CCCceEEEecCccccCCHHHHHHHHHHHHhCCCcEEEEeeCCHHHHHHHHHHHHHcCCChhhEEEcCCCCHHHHHHHhhh
Confidence 456799999999998999999999999999998888877543211 11112222211457899988888664 4455
Q ss_pred cccccee---ccCChhHHHHHHHhCCcEeccCCcc-chhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcCC
Q 012412 351 EATGCFV---THCGWNSTMEALSLGVPMVAMPQWS-DQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGE 420 (464)
Q Consensus 351 ~~~~~vI---~HgG~~s~~eal~~GvP~v~~P~~~-DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~~ 420 (464)
+|+ ++ ..+|.+|.+|||+.|||+|.+|-.. =...-+..+..+ |+...+- .+.++..+.--++-.|.
T Consensus 362 ~DI--~LDT~p~nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~l-Gl~ElIA-~s~~eYv~~Av~La~D~ 431 (468)
T PF13844_consen 362 ADI--CLDTFPYNGGTTTLDALWMGVPVVTLPGETMASRVGASILRAL-GLPELIA-DSEEEYVEIAVRLATDP 431 (468)
T ss_dssp -SE--EE--SSS--SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHH-T-GGGB--SSHHHHHHHHHHHHH-H
T ss_pred CCE--EeeCCCCCCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHc-CCchhcC-CCHHHHHHHHHHHhCCH
Confidence 777 65 6789999999999999999999533 344456667777 7775553 45677777667777775
|
|
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.12 E-value=7.3e-05 Score=74.05 Aligned_cols=132 Identities=16% Similarity=0.248 Sum_probs=82.9
Q ss_pred CceEEEEecccccCCHHHHHHHHHHHhh---C--CCeEEEEEcCcccCcCChhhhh---hccCCCcEEEEeccChH---H
Q 012412 278 ESVVYVSYGSFVELKAEEMEELAWGLKS---S--DQHFLWVVRESEQAKLPKKFSD---ETLTSHKSLVVSWCPQL---E 346 (464)
Q Consensus 278 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~---~--~~~~i~~~~~~~~~~~~~~~~~---~~~~~~nv~~~~~~p~~---~ 346 (464)
++..++++|.+... +.+..+++++.+ . +..+.|+.-++. ...+.+.+ .....++|.+.+|+++. .
T Consensus 229 ~~~~il~~Grl~~~--Kg~~~li~a~~~l~~~~p~~~l~~~iiG~g--~~~~~l~~~~~~~~~~~~V~f~G~v~~~e~~~ 304 (407)
T cd04946 229 DTLRIVSCSYLVPV--KRVDLIIKALAALAKARPSIKIKWTHIGGG--PLEDTLKELAESKPENISVNFTGELSNSEVYK 304 (407)
T ss_pred CCEEEEEeeccccc--cCHHHHHHHHHHHHHhCCCceEEEEEEeCc--hHHHHHHHHHHhcCCCceEEEecCCChHHHHH
Confidence 44677778887622 223333344332 1 235555443321 11122221 11134689999999976 4
Q ss_pred hhcc--ccccceeccC---C-hhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeecc-CcCHHHHHHHHHHHhcC
Q 012412 347 VLAH--EATGCFVTHC---G-WNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP-IVKRDAIADCISEILEG 419 (464)
Q Consensus 347 ll~~--~~~~~vI~Hg---G-~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~-~~~~~~l~~~i~~ll~~ 419 (464)
++.. +++ +|... | ..+++||+++|+|+|+.. -......+.+. +.|..+. ..+.+++.++|.++++|
T Consensus 305 ~~~~~~~~v--~v~~S~~Eg~p~~llEAma~G~PVIas~----vgg~~e~i~~~-~~G~l~~~~~~~~~la~~I~~ll~~ 377 (407)
T cd04946 305 LYKENPVDV--FVNLSESEGLPVSIMEAMSFGIPVIATN----VGGTPEIVDNG-GNGLLLSKDPTPNELVSSLSKFIDN 377 (407)
T ss_pred HHhhcCCCE--EEeCCccccccHHHHHHHHcCCCEEeCC----CCCcHHHhcCC-CcEEEeCCCCCHHHHHHHHHHHHhC
Confidence 5544 455 76443 2 467899999999999754 44466667666 6898887 66899999999999988
Q ss_pred C
Q 012412 420 E 420 (464)
Q Consensus 420 ~ 420 (464)
+
T Consensus 378 ~ 378 (407)
T cd04946 378 E 378 (407)
T ss_pred H
Confidence 6
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. |
| >COG5017 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.06 E-value=2.4e-05 Score=61.51 Aligned_cols=108 Identities=14% Similarity=0.154 Sum_probs=70.9
Q ss_pred EEEEecccccCCHHHHHH--HHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEec--cC-hHHhhccccccc
Q 012412 281 VYVSYGSFVELKAEEMEE--LAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSW--CP-QLEVLAHEATGC 355 (464)
Q Consensus 281 v~vs~Gs~~~~~~~~~~~--~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~--~p-~~~ll~~~~~~~ 355 (464)
+|||.||....=...+.. +....+.-..++|+.+|.+... | ..+ .++.+| -+ .+.+...+++
T Consensus 2 ifVTvGstf~~f~rlv~k~e~~el~~~i~e~lIvQyGn~d~k--p--------vag-l~v~~F~~~~kiQsli~darI-- 68 (161)
T COG5017 2 IFVTVGSTFYPFNRLVLKIEVLELTELIQEELIVQYGNGDIK--P--------VAG-LRVYGFDKEEKIQSLIHDARI-- 68 (161)
T ss_pred eEEEecCccchHHHHHhhHHHHHHHHHhhhheeeeecCCCcc--c--------ccc-cEEEeechHHHHHHHhhcceE--
Confidence 789999985211111111 2222233345889999875322 2 111 244443 34 4488888888
Q ss_pred eeccCChhHHHHHHHhCCcEeccCCcc--------chhhHHHHHHhHhcceeecc
Q 012412 356 FVTHCGWNSTMEALSLGVPMVAMPQWS--------DQSTNAKYILDVWKTGLKFP 402 (464)
Q Consensus 356 vI~HgG~~s~~eal~~GvP~v~~P~~~--------DQ~~na~rl~~~~G~g~~l~ 402 (464)
||+|+|-||+..++..++|.+++|-.. .|-.-|..+.+. +.=....
T Consensus 69 VISHaG~GSIL~~~rl~kplIv~pr~s~y~elvDdHQvela~klae~-~~vv~~s 122 (161)
T COG5017 69 VISHAGEGSILLLLRLDKPLIVVPRSSQYQELVDDHQVELALKLAEI-NYVVACS 122 (161)
T ss_pred EEeccCcchHHHHhhcCCcEEEEECchhHHHhhhhHHHHHHHHHHhc-CceEEEc
Confidence 999999999999999999999999643 577788888888 6555443
|
|
| >PRK14099 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=98.04 E-value=0.0089 Score=60.52 Aligned_cols=133 Identities=16% Similarity=0.225 Sum_probs=71.9
Q ss_pred ceEEEEecccccCCHHHHHHHHHHHh---hCCCeEEEEEcCcccCcCChhhh---hhccCCCcE-EEEeccChH-Hhh-c
Q 012412 279 SVVYVSYGSFVELKAEEMEELAWGLK---SSDQHFLWVVRESEQAKLPKKFS---DETLTSHKS-LVVSWCPQL-EVL-A 349 (464)
Q Consensus 279 ~~v~vs~Gs~~~~~~~~~~~~~~al~---~~~~~~i~~~~~~~~~~~~~~~~---~~~~~~~nv-~~~~~~p~~-~ll-~ 349 (464)
.+++...|... +.+-+..++++++ +.+.++++.-.+.. .+.+.+. ++ .++++ .+.+|-... .++ +
T Consensus 295 ~~li~~VgRL~--~~KG~d~Li~A~~~l~~~~~~lvivG~G~~--~~~~~l~~l~~~--~~~~v~~~~G~~~~l~~~~~a 368 (485)
T PRK14099 295 ALLLGVISRLS--WQKGLDLLLEALPTLLGEGAQLALLGSGDA--ELEARFRAAAQA--YPGQIGVVIGYDEALAHLIQA 368 (485)
T ss_pred CcEEEEEecCC--ccccHHHHHHHHHHHHhcCcEEEEEecCCH--HHHHHHHHHHHH--CCCCEEEEeCCCHHHHHHHHh
Confidence 34555667765 2233333444433 33566665544321 1122222 22 34565 566774333 344 5
Q ss_pred cccccceec---cCChh-HHHHHHHhCCcEeccCCcc--chhhHHH-H--HHhHhcceeeccCcCHHHHHHHHHH---Hh
Q 012412 350 HEATGCFVT---HCGWN-STMEALSLGVPMVAMPQWS--DQSTNAK-Y--ILDVWKTGLKFPIVKRDAIADCISE---IL 417 (464)
Q Consensus 350 ~~~~~~vI~---HgG~~-s~~eal~~GvP~v~~P~~~--DQ~~na~-r--l~~~~G~g~~l~~~~~~~l~~~i~~---ll 417 (464)
.+|+ ||. +=|+| +.+||+++|+|.|+....+ |.-.... . .+.. +.|...+..++++|.++|.+ ++
T Consensus 369 ~aDi--fv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~-~~G~l~~~~d~~~La~ai~~a~~l~ 445 (485)
T PRK14099 369 GADA--LLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGV-ATGVQFSPVTADALAAALRKTAALF 445 (485)
T ss_pred cCCE--EEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCC-CceEEeCCCCHHHHHHHHHHHHHHh
Confidence 6898 774 34444 6689999998777654322 3211110 0 1112 35787776789999999997 56
Q ss_pred cCC
Q 012412 418 EGE 420 (464)
Q Consensus 418 ~~~ 420 (464)
+|+
T Consensus 446 ~d~ 448 (485)
T PRK14099 446 ADP 448 (485)
T ss_pred cCH
Confidence 664
|
|
| >PLN02501 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=97.96 E-value=0.0077 Score=61.74 Aligned_cols=76 Identities=17% Similarity=0.156 Sum_probs=54.8
Q ss_pred cEEEEeccChH-Hhhccccccceec---cCC-hhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHH
Q 012412 335 KSLVVSWCPQL-EVLAHEATGCFVT---HCG-WNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAI 409 (464)
Q Consensus 335 nv~~~~~~p~~-~ll~~~~~~~vI~---HgG-~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l 409 (464)
++.+.++.++. .+++.+|+ ||. +=| ..++.||+++|+|+|+....+... +.+. +.|... -+.+++
T Consensus 602 ~V~FLG~~dd~~~lyasaDV--FVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~e~-----V~~g-~nGll~--~D~Eaf 671 (794)
T PLN02501 602 NLNFLKGRDHADDSLHGYKV--FINPSISDVLCTATAEALAMGKFVVCADHPSNEF-----FRSF-PNCLTY--KTSEDF 671 (794)
T ss_pred EEEecCCCCCHHHHHHhCCE--EEECCCcccchHHHHHHHHcCCCEEEecCCCCce-----Eeec-CCeEec--CCHHHH
Confidence 57777888766 69999999 875 333 457899999999999976544221 2223 333333 478999
Q ss_pred HHHHHHHhcCC
Q 012412 410 ADCISEILEGE 420 (464)
Q Consensus 410 ~~~i~~ll~~~ 420 (464)
.+++.++|.++
T Consensus 672 AeAI~~LLsd~ 682 (794)
T PLN02501 672 VAKVKEALANE 682 (794)
T ss_pred HHHHHHHHhCc
Confidence 99999999886
|
|
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=97.95 E-value=0.00058 Score=61.11 Aligned_cols=49 Identities=18% Similarity=0.155 Sum_probs=38.0
Q ss_pred CCCcEEEEeccCh-H---HhhccccccceeccCC----hhHHHHHHHhCCcEeccCCcc
Q 012412 332 TSHKSLVVSWCPQ-L---EVLAHEATGCFVTHCG----WNSTMEALSLGVPMVAMPQWS 382 (464)
Q Consensus 332 ~~~nv~~~~~~p~-~---~ll~~~~~~~vI~HgG----~~s~~eal~~GvP~v~~P~~~ 382 (464)
..+|+.+.++++. . .++..+++ +|+-.. .+++.||+++|+|+|+.+...
T Consensus 159 ~~~~v~~~~~~~~~~~~~~~~~~~di--~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~ 215 (229)
T cd01635 159 LLDRVIFLGGLDPEELLALLLAAADV--FVLPSLREGFGLVVLEAMACGLPVIATDVGG 215 (229)
T ss_pred CcccEEEeCCCCcHHHHHHHhhcCCE--EEecccccCcChHHHHHHhCCCCEEEcCCCC
Confidence 5678999988632 2 45555999 887766 789999999999999977654
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.00082 Score=66.15 Aligned_cols=107 Identities=15% Similarity=0.247 Sum_probs=82.8
Q ss_pred CCCceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhcc----CCCcEEEEeccChH---Hhh
Q 012412 276 AKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETL----TSHKSLVVSWCPQL---EVL 348 (464)
Q Consensus 276 ~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~----~~~nv~~~~~~p~~---~ll 348 (464)
+++.+||++++......++.+..-++.++..+..++|..+++....+-..+++.+. ..+++++.+-.|.. +-+
T Consensus 427 p~~avVf~c~~n~~K~~pev~~~wmqIL~~vP~Svl~L~~~~~~~~~~~~l~~la~~~Gv~~eRL~f~p~~~~~~h~a~~ 506 (620)
T COG3914 427 PEDAVVFCCFNNYFKITPEVFALWMQILSAVPNSVLLLKAGGDDAEINARLRDLAEREGVDSERLRFLPPAPNEDHRARY 506 (620)
T ss_pred CCCeEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEecCCCcHHHHHHHHHHHHHcCCChhheeecCCCCCHHHHHhh
Confidence 45679999999999889999999999999999999999988544433333332211 35788888877644 556
Q ss_pred cccccccee---ccCChhHHHHHHHhCCcEeccCCccchhh
Q 012412 349 AHEATGCFV---THCGWNSTMEALSLGVPMVAMPQWSDQST 386 (464)
Q Consensus 349 ~~~~~~~vI---~HgG~~s~~eal~~GvP~v~~P~~~DQ~~ 386 (464)
..+|+ |. -.||..|..|+|..|||+|..+ ++|+-
T Consensus 507 ~iADl--vLDTyPY~g~TTa~daLwm~vPVlT~~--G~~Fa 543 (620)
T COG3914 507 GIADL--VLDTYPYGGHTTASDALWMGVPVLTRV--GEQFA 543 (620)
T ss_pred chhhe--eeecccCCCccchHHHHHhcCceeeec--cHHHH
Confidence 66777 76 6899999999999999999877 66654
|
|
| >PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A | Back alignment and domain information |
|---|
Probab=97.74 E-value=7.5e-05 Score=61.39 Aligned_cols=80 Identities=20% Similarity=0.313 Sum_probs=51.6
Q ss_pred CCcEEEEeccChH-Hhhccccccceecc--CC-hhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHH
Q 012412 333 SHKSLVVSWCPQL-EVLAHEATGCFVTH--CG-WNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDA 408 (464)
Q Consensus 333 ~~nv~~~~~~p~~-~ll~~~~~~~vI~H--gG-~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~ 408 (464)
.+||.+.+|++.. +++..+++.+..+. .| .+++.|++++|+|+|+.+. .....++.. +.|..+ .-++++
T Consensus 52 ~~~v~~~g~~~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~-----~~~~~~~~~-~~~~~~-~~~~~~ 124 (135)
T PF13692_consen 52 RPNVRFHGFVEELPEILAAADVGLIPSRFNEGFPNKLLEAMAAGKPVIASDN-----GAEGIVEED-GCGVLV-ANDPEE 124 (135)
T ss_dssp HCTEEEE-S-HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHH-----HCHCHS----SEEEE--TT-HHH
T ss_pred CCCEEEcCCHHHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhCCCEEECCc-----chhhheeec-CCeEEE-CCCHHH
Confidence 4699999999644 88999999555442 23 4899999999999998765 123344446 777777 568999
Q ss_pred HHHHHHHHhcC
Q 012412 409 IADCISEILEG 419 (464)
Q Consensus 409 l~~~i~~ll~~ 419 (464)
+.++|.++++|
T Consensus 125 l~~~i~~l~~d 135 (135)
T PF13692_consen 125 LAEAIERLLND 135 (135)
T ss_dssp HHHHHHHHHH-
T ss_pred HHHHHHHHhcC
Confidence 99999999875
|
|
| >PHA01633 putative glycosyl transferase group 1 | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00058 Score=64.93 Aligned_cols=86 Identities=14% Similarity=0.136 Sum_probs=60.5
Q ss_pred CCCcEEEE---eccChH---Hhhccccccceecc---CCh-hHHHHHHHhCCcEeccCC------ccch------hhHHH
Q 012412 332 TSHKSLVV---SWCPQL---EVLAHEATGCFVTH---CGW-NSTMEALSLGVPMVAMPQ------WSDQ------STNAK 389 (464)
Q Consensus 332 ~~~nv~~~---~~~p~~---~ll~~~~~~~vI~H---gG~-~s~~eal~~GvP~v~~P~------~~DQ------~~na~ 389 (464)
.+++|.+. +++++. .+++.+|+ +|.- -|+ .++.||+++|+|+|+.-. .+|+ .++..
T Consensus 199 l~~~V~f~g~~G~~~~~dl~~~y~~aDi--fV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~ 276 (335)
T PHA01633 199 VPANVHFVAEFGHNSREYIFAFYGAMDF--TIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVE 276 (335)
T ss_pred CCCcEEEEecCCCCCHHHHHHHHHhCCE--EEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHH
Confidence 67889988 455544 78899999 8753 344 578999999999998532 2222 23333
Q ss_pred HHH--hHhcceeeccCcCHHHHHHHHHHHhcCC
Q 012412 390 YIL--DVWKTGLKFPIVKRDAIADCISEILEGE 420 (464)
Q Consensus 390 rl~--~~~G~g~~l~~~~~~~l~~~i~~ll~~~ 420 (464)
-.. .. |.|...+..++++++++|.+++..+
T Consensus 277 ~~~~~~~-g~g~~~~~~d~~~la~ai~~~~~~~ 308 (335)
T PHA01633 277 EYYDKEH-GQKWKIHKFQIEDMANAIILAFELQ 308 (335)
T ss_pred HhcCccc-CceeeecCCCHHHHHHHHHHHHhcc
Confidence 333 35 6777777889999999999996543
|
|
| >TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.0033 Score=60.10 Aligned_cols=136 Identities=14% Similarity=0.086 Sum_probs=82.9
Q ss_pred HhhcCCCCceEEEEecccc---cCCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEe--ccChH
Q 012412 271 WLNDRAKESVVYVSYGSFV---ELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVS--WCPQL 345 (464)
Q Consensus 271 ~l~~~~~~~~v~vs~Gs~~---~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~--~~p~~ 345 (464)
++....+++.|.+..|+.. ..+.+.+.++++.+.+.++++++..++.......+++.+. .+. ..+.+ -+++.
T Consensus 172 ~~~~~~~~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~~~~~vl~~g~~~e~~~~~~i~~~--~~~-~~l~g~~sL~el 248 (319)
T TIGR02193 172 FLGHALPAPYAVLLHATSRDDKTWPEERWRELARLLLARGLQIVLPWGNDAEKQRAERIAEA--LPG-AVVLPKMSLAEV 248 (319)
T ss_pred hhhccCCCCEEEEEeCCCcccCCCCHHHHHHHHHHHHHCCCeEEEeCCCHHHHHHHHHHHhh--CCC-CeecCCCCHHHH
Confidence 4433234567777777643 5688999999999876677877665543322222333332 222 23333 23444
Q ss_pred -HhhccccccceeccCChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhccee------eccCcCHHHHHHHHHHHh
Q 012412 346 -EVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGL------KFPIVKRDAIADCISEIL 417 (464)
Q Consensus 346 -~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~------~l~~~~~~~l~~~i~~ll 417 (464)
.++.+|++ +|+. -.|.++=|.+.|+|.|.+=-..+ ..+..=. |-.. .+...+++++.++++++|
T Consensus 249 ~ali~~a~l--~I~~-DSgp~HlAaa~g~P~i~lfg~t~----p~~~~P~-~~~~~~~~~~~~~~I~~~~V~~ai~~~~ 319 (319)
T TIGR02193 249 AALLAGADA--VVGV-DTGLTHLAAALDKPTVTLYGATD----PGRTGGY-GKPNVALLGESGANPTPDEVLAALEELL 319 (319)
T ss_pred HHHHHcCCE--EEeC-CChHHHHHHHcCCCEEEEECCCC----HhhcccC-CCCceEEccCccCCCCHHHHHHHHHhhC
Confidence 89999999 9987 78999999999999987411111 1111001 1111 122789999999998765
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >PRK09814 beta-1,6-galactofuranosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00089 Score=64.39 Aligned_cols=98 Identities=19% Similarity=0.297 Sum_probs=73.6
Q ss_pred CCCcEEEEeccChHHh---hccccccceecc-------CCh------hHHHHHHHhCCcEeccCCccchhhHHHHHHhHh
Q 012412 332 TSHKSLVVSWCPQLEV---LAHEATGCFVTH-------CGW------NSTMEALSLGVPMVAMPQWSDQSTNAKYILDVW 395 (464)
Q Consensus 332 ~~~nv~~~~~~p~~~l---l~~~~~~~vI~H-------gG~------~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~ 395 (464)
..+||.+.+|+|+.++ |.. +.+++... +.+ +-+.+++++|+|+|+. ++...+..+++.
T Consensus 205 ~~~~V~f~G~~~~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~----~~~~~~~~V~~~- 278 (333)
T PRK09814 205 NSANISYKGWFDPEELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVW----SKAAIADFIVEN- 278 (333)
T ss_pred cCCCeEEecCCCHHHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEEC----CCccHHHHHHhC-
Confidence 5689999999998855 444 43333221 111 2377899999999974 467889999999
Q ss_pred cceeeccCcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHH
Q 012412 396 KTGLKFPIVKRDAIADCISEILEGERGKELRRNAGKWRKLAKE 438 (464)
Q Consensus 396 G~g~~l~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~ 438 (464)
++|..++ +.+++.+++.++. +++..++++|++++++++++
T Consensus 279 ~~G~~v~--~~~el~~~l~~~~-~~~~~~m~~n~~~~~~~~~~ 318 (333)
T PRK09814 279 GLGFVVD--SLEELPEIIDNIT-EEEYQEMVENVKKISKLLRN 318 (333)
T ss_pred CceEEeC--CHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHhc
Confidence 9999996 6678999998864 33345799999999999983
|
|
| >PRK10422 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.0056 Score=59.38 Aligned_cols=99 Identities=9% Similarity=0.153 Sum_probs=65.7
Q ss_pred CCceEEEEecccc---cCCHHHHHHHHHHHhhCCCeEEEEEcCcccC-cCChhhhhhccCCCcEEEEec--cChH-Hhhc
Q 012412 277 KESVVYVSYGSFV---ELKAEEMEELAWGLKSSDQHFLWVVRESEQA-KLPKKFSDETLTSHKSLVVSW--CPQL-EVLA 349 (464)
Q Consensus 277 ~~~~v~vs~Gs~~---~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~nv~~~~~--~p~~-~ll~ 349 (464)
+++.|.+..|+.. ..+.+.+.++++.|.+.++++++..++.+.+ ...+++.+....+..+-+.+- +.+. .++.
T Consensus 182 ~~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~~~~vvl~ggp~e~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali~ 261 (352)
T PRK10422 182 TQNYVVIQPTARQIFKCWDNDKFSAVIDALQARGYEVVLTSGPDKDDLACVNEIAQGCQTPPVTALAGKTTFPELGALID 261 (352)
T ss_pred CCCeEEEecCCCccccCCCHHHHHHHHHHHHHCCCeEEEEcCCChHHHHHHHHHHHhcCCCccccccCCCCHHHHHHHHH
Confidence 3568888888864 5688999999999987788877665543211 111222221001122334443 3333 8999
Q ss_pred cccccceeccCChhHHHHHHHhCCcEecc
Q 012412 350 HEATGCFVTHCGWNSTMEALSLGVPMVAM 378 (464)
Q Consensus 350 ~~~~~~vI~HgG~~s~~eal~~GvP~v~~ 378 (464)
+|++ ||+. -.|-++=|.+.|+|.|.+
T Consensus 262 ~a~l--~v~n-DSGp~HlAaA~g~P~v~l 287 (352)
T PRK10422 262 HAQL--FIGV-DSAPAHIAAAVNTPLICL 287 (352)
T ss_pred hCCE--EEec-CCHHHHHHHHcCCCEEEE
Confidence 9999 9998 788999999999999874
|
|
| >PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.011 Score=57.25 Aligned_cols=103 Identities=14% Similarity=0.048 Sum_probs=68.6
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhC--CCeEEEEeCcccccccccCCCCCCceEE-EccCCCCCCCCCCccCHHHHHH
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHK--GIKVTLVTTRFFYKSLHRDSSSSSIPLE-AISDGYDEGGYAQAESIEAYLE 90 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~r--Gh~V~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~ 90 (464)
||||++-..+-|++.-+.++.+.|+++ +.+|++++.+...+.++. .+.+.-+ .++.. . .....
T Consensus 1 mrILii~~~~iGD~il~tP~l~~Lk~~~P~a~I~~l~~~~~~~l~~~---~P~vd~vi~~~~~--~----~~~~~----- 66 (348)
T PRK10916 1 MKILVIGPSWVGDMMMSQSLYRTLKARYPQAIIDVMAPAWCRPLLSR---MPEVNEAIPMPLG--H----GALEI----- 66 (348)
T ss_pred CcEEEEccCcccHHHhHHHHHHHHHHHCCCCeEEEEechhhHHHHhc---CCccCEEEecccc--c----chhhh-----
Confidence 589999999999999999999999996 899999999888777772 2222221 11210 0 00000
Q ss_pred HHHHhCcHHHHHHHHHhcCCCCCccEEEeCCchhhHHHHHHHcCCccEE
Q 012412 91 RFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAP 139 (464)
Q Consensus 91 ~~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~~~~~~~A~~~giP~v~ 139 (464)
....++++++.. +.||+||.-....-...++...|+|.-+
T Consensus 67 -------~~~~~l~~~lr~--~~yD~vidl~~~~~s~~l~~~~~~~~ri 106 (348)
T PRK10916 67 -------GERRRLGHSLRE--KRYDRAYVLPNSFKSALVPFFAGIPHRT 106 (348)
T ss_pred -------HHHHHHHHHHHh--cCCCEEEECCCcHHHHHHHHHcCCCeEe
Confidence 112344455554 3589999765555566778888888654
|
|
| >TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.0085 Score=57.93 Aligned_cols=97 Identities=14% Similarity=0.196 Sum_probs=64.8
Q ss_pred CCceEEEEecccc---cCCHHHHHHHHHHHhhCCCeEEEEEcCcccC-cCChhhhhhccCC-CcE-EEEec--cChH-Hh
Q 012412 277 KESVVYVSYGSFV---ELKAEEMEELAWGLKSSDQHFLWVVRESEQA-KLPKKFSDETLTS-HKS-LVVSW--CPQL-EV 347 (464)
Q Consensus 277 ~~~~v~vs~Gs~~---~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~-~nv-~~~~~--~p~~-~l 347 (464)
+++.|.+..|+.. ..+.+.+.++++.+.+.+.++++..++.+.+ ..-+++.+. .+ .++ -+.+- +.+. .+
T Consensus 180 ~~~~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~~~~~ivl~g~p~~~e~~~~~~i~~~--~~~~~~~~l~g~~sL~el~al 257 (344)
T TIGR02201 180 GQNYIVIQPTSRWFFKCWDNDRFSALIDALHARGYEVVLTSGPDKDELAMVNEIAQG--CQTPRVTSLAGKLTLPQLAAL 257 (344)
T ss_pred CCCEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHhh--CCCCcccccCCCCCHHHHHHH
Confidence 4567888888754 4688999999998877678877664432111 112233222 11 122 23332 3334 89
Q ss_pred hccccccceeccCChhHHHHHHHhCCcEecc
Q 012412 348 LAHEATGCFVTHCGWNSTMEALSLGVPMVAM 378 (464)
Q Consensus 348 l~~~~~~~vI~HgG~~s~~eal~~GvP~v~~ 378 (464)
+.++++ ||+. -.|.++=|.+.|+|.|.+
T Consensus 258 i~~a~l--~Vs~-DSGp~HlAaA~g~p~v~L 285 (344)
T TIGR02201 258 IDHARL--FIGV-DSVPMHMAAALGTPLVAL 285 (344)
T ss_pred HHhCCE--EEec-CCHHHHHHHHcCCCEEEE
Confidence 999999 9998 889999999999999974
|
This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II. |
| >TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.016 Score=55.71 Aligned_cols=96 Identities=15% Similarity=0.112 Sum_probs=64.8
Q ss_pred CCceEEEEeccc--c--cCCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEE-EEe--ccChH-Hhh
Q 012412 277 KESVVYVSYGSF--V--ELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSL-VVS--WCPQL-EVL 348 (464)
Q Consensus 277 ~~~~v~vs~Gs~--~--~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~-~~~--~~p~~-~ll 348 (464)
+++.|.+..|+. . ..+.+.+.++++.+.+.+.++++..++. .....+++.+. .+.++. +.+ -+.+. .++
T Consensus 173 ~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~~~~ivl~G~~~-e~~~~~~i~~~--~~~~~~~l~g~~sL~el~ali 249 (334)
T TIGR02195 173 ERPIIAFCPGAEFGPAKRWPHEHYAELAKRLIDQGYQVVLFGSAK-DHPAGNEIEAL--LPGELRNLAGETSLDEAVDLI 249 (334)
T ss_pred CCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHHCCCEEEEEEChh-hHHHHHHHHHh--CCcccccCCCCCCHHHHHHHH
Confidence 567898988874 2 4689999999998877677766654332 22222333322 233322 333 23333 899
Q ss_pred ccccccceeccCChhHHHHHHHhCCcEecc
Q 012412 349 AHEATGCFVTHCGWNSTMEALSLGVPMVAM 378 (464)
Q Consensus 349 ~~~~~~~vI~HgG~~s~~eal~~GvP~v~~ 378 (464)
+++++ +|+. -.|.++=|.+.|+|+|++
T Consensus 250 ~~a~l--~I~~-DSGp~HlAaA~~~P~i~l 276 (334)
T TIGR02195 250 ALAKA--VVTN-DSGLMHVAAALNRPLVAL 276 (334)
T ss_pred HhCCE--EEee-CCHHHHHHHHcCCCEEEE
Confidence 99999 9988 788999999999999873
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.0076 Score=57.66 Aligned_cols=132 Identities=12% Similarity=0.074 Sum_probs=79.8
Q ss_pred CceEEEEec-ccc--cCCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEe--ccChH-Hhhccc
Q 012412 278 ESVVYVSYG-SFV--ELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVS--WCPQL-EVLAHE 351 (464)
Q Consensus 278 ~~~v~vs~G-s~~--~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~--~~p~~-~ll~~~ 351 (464)
++.|.+..| +.. ..+.+.+.++++.+.+.+.++++..|+..+....+.+.+. ..++.+.+ .+.+. .++.+|
T Consensus 178 ~~~i~~~~~~s~~~k~Wp~e~~a~li~~l~~~~~~ivl~~G~~~e~~~~~~i~~~---~~~~~l~g~~sL~elaali~~a 254 (322)
T PRK10964 178 GPYLVFLHATTRDDKHWPEAHWRELIGLLAPSGLRIKLPWGAEHEEQRAKRLAEG---FPYVEVLPKLSLEQVARVLAGA 254 (322)
T ss_pred CCeEEEEeCCCcccccCCHHHHHHHHHHHHHCCCeEEEeCCCHHHHHHHHHHHcc---CCcceecCCCCHHHHHHHHHhC
Confidence 345544444 433 4689999999999877777876654543322222333221 12344443 33444 899999
Q ss_pred cccceeccCChhHHHHHHHhCCcEecc--CCccc----hhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhc
Q 012412 352 ATGCFVTHCGWNSTMEALSLGVPMVAM--PQWSD----QSTNAKYILDVWKTGLKFPIVKRDAIADCISEILE 418 (464)
Q Consensus 352 ~~~~vI~HgG~~s~~eal~~GvP~v~~--P~~~D----Q~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~ 418 (464)
++ +|+. -.|.++=|.+.|+|.|++ |.... ...|...+. -++..+...+++.+.++++++|+
T Consensus 255 ~l--~I~n-DSGp~HlA~A~g~p~valfGpt~p~~~~p~~~~~~~~~---~~~~cm~~I~~e~V~~~~~~~l~ 321 (322)
T PRK10964 255 KA--VVSV-DTGLSHLTAALDRPNITLYGPTDPGLIGGYGKNQHACR---SPGKSMADLSAETVFQKLETLIS 321 (322)
T ss_pred CE--EEec-CCcHHHHHHHhCCCEEEEECCCCcccccCCCCCceeec---CCCcccccCCHHHHHHHHHHHhh
Confidence 99 9987 788999999999999984 22111 111111111 11222337889999999988774
|
|
| >KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.013 Score=58.41 Aligned_cols=153 Identities=20% Similarity=0.303 Sum_probs=98.2
Q ss_pred CCCceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhh----hhccCCCcEEEEeccChHHh----
Q 012412 276 AKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFS----DETLTSHKSLVVSWCPQLEV---- 347 (464)
Q Consensus 276 ~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~----~~~~~~~nv~~~~~~p~~~l---- 347 (464)
+++.+||++|-..-..+|+.++.-.+.|++.+..++|......... ..|+ +....|++|.+.+-++..+-
T Consensus 756 p~d~vvf~~FNqLyKidP~~l~~W~~ILk~VPnS~LwllrfPa~ge--~rf~ty~~~~Gl~p~riifs~va~k~eHvrr~ 833 (966)
T KOG4626|consen 756 PEDAVVFCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGE--QRFRTYAEQLGLEPDRIIFSPVAAKEEHVRRG 833 (966)
T ss_pred CCCeEEEeechhhhcCCHHHHHHHHHHHHhCCcceeEEEeccccch--HHHHHHHHHhCCCccceeeccccchHHHHHhh
Confidence 4566899999877778999999999999999999999986543221 2222 11115678888777665533
Q ss_pred -hccccccceeccCChhHHHHHHHhCCcEeccCCccchhh-HHHHHHhHhcceeeccCcCHHHHHHHHHHHhcCCchHHH
Q 012412 348 -LAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQST-NAKYILDVWKTGLKFPIVKRDAIADCISEILEGERGKEL 425 (464)
Q Consensus 348 -l~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~-na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~~~~~~~ 425 (464)
|+...+....+. |..|.++.|+.|||||.+|...--.. -+..+... |+|..+- -+.++..+.--++-.|
T Consensus 834 ~LaDv~LDTplcn-GhTTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~~-Gl~hlia-k~~eEY~~iaV~Latd------ 904 (966)
T KOG4626|consen 834 QLADVCLDTPLCN-GHTTGMDVLWAGVPMVTMPGETLASRVAASLLTAL-GLGHLIA-KNREEYVQIAVRLATD------ 904 (966)
T ss_pred hhhhhcccCcCcC-CcccchhhhccCCceeecccHHHHHHHHHHHHHHc-ccHHHHh-hhHHHHHHHHHHhhcC------
Confidence 333333335555 88899999999999999996543333 34456667 8887553 2344444433344444
Q ss_pred HHHHHHHHHHHHHH
Q 012412 426 RRNAGKWRKLAKEA 439 (464)
Q Consensus 426 ~~~a~~l~~~~~~~ 439 (464)
+...++++.+++++
T Consensus 905 ~~~L~~lr~~l~~~ 918 (966)
T KOG4626|consen 905 KEYLKKLRAKLRKA 918 (966)
T ss_pred HHHHHHHHHHHHHH
Confidence 33444455555554
|
|
| >COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.03 Score=53.84 Aligned_cols=266 Identities=16% Similarity=0.153 Sum_probs=143.3
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhC--CCeEEEEeCcccccccccCCCCCCceEEEccCCCCCCCCCCccCHHHHHH
Q 012412 13 LAHCLVLTYPGQGHINPLLQFSRRLQHK--GIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGYAQAESIEAYLE 90 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~r--Gh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 90 (464)
+||||++-...-|++.=.+++-+.|+++ +.++++++.+.+.+.+.. ...+.-+-+-..... .
T Consensus 1 ~~kIliir~~~iGD~vlt~p~~~~lk~~~P~a~i~~~~~~~~~~i~~~---~p~I~~vi~~~~~~~-------~------ 64 (334)
T COG0859 1 MMKILVIRLSKLGDVVLTLPLLRTLKKAYPNAKIDVLVPKGFAPILKL---NPEIDKVIIIDKKKK-------G------ 64 (334)
T ss_pred CceEEEEeccchhHHHhHHHHHHHHHHHCCCCEEEEEeccchHHHHhc---ChHhhhhcccccccc-------c------
Confidence 4799999999999999999999999998 599999999988877772 111111111000000 0
Q ss_pred HHHHhCcHHHHHHHHHhcCCCCCccEEEeCCchhhHHHHHHHcCCccEEEecchHHHHHHHhhhhcCcccCCCCCCceeC
Q 012412 91 RFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNEILL 170 (464)
Q Consensus 91 ~~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 170 (464)
........+.+.+.. ..||+||.=....-...++...++|.-+-.-.....
T Consensus 65 ----~~~~~~~~l~~~lr~--~~yD~vidl~~~~ksa~l~~~~~~~~r~g~~~~~~r----------------------- 115 (334)
T COG0859 65 ----LGLKERLALLRTLRK--ERYDAVIDLQGLLKSALLALLLGIPFRIGFDKKSAR----------------------- 115 (334)
T ss_pred ----cchHHHHHHHHHhhc--cCCCEEEECcccHHHHHHHHHhCCCcccccccccch-----------------------
Confidence 112233455555554 348999987666667777778888855421100000
Q ss_pred CCCCCCCCCCCCCccccCCCCchHHHHHHHHHhhhccCCcEEEecchhhhhHHHHHHHHhcCCeeeecccCCCccccccc
Q 012412 171 PGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTWSLRTIGPTIPSFYLDKQI 250 (464)
Q Consensus 171 p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~vgp~~~~~~~~~~~ 250 (464)
..+..... .. ... -...+.++. ....... .|-.....
T Consensus 116 ---------------------~~~~~~~~-~~---~~~-----~~~~~~~~~-~~~l~~~------~~~~~~~~------ 152 (334)
T COG0859 116 ---------------------ELLLNKFY-PR---LDK-----PEGQHVVER-YLALLED------LGLYPPPE------ 152 (334)
T ss_pred ---------------------hHHHHHhh-hc---cCc-----ccchhHHHH-HHHHHHH------hcCCCCCC------
Confidence 00111111 00 000 000001110 1111111 01000000
Q ss_pred cCcccccccccccchhHHHHHhhcCCCCceEEEEec-ccc---cCCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhh
Q 012412 251 EDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYG-SFV---ELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKF 326 (464)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~G-s~~---~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~ 326 (464)
+. ....... ...+...-+... +++.|.++.| +.. ..+.+.+.++++.+.+.+.++++..+. ......+++
T Consensus 153 ~~---~~~~~~~-~~~~~~~~~~~~-~~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~g~~-~e~e~~~~i 226 (334)
T COG0859 153 PQ---LDFPLPR-PPIELAKNLAKF-DRPYIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLFGGP-DEEERAEEI 226 (334)
T ss_pred Cc---cCccccc-CHHHHHHHHHhc-CCCeEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEecCh-HHHHHHHHH
Confidence 00 0000000 012222222221 1578999999 442 578999999999999888665555444 333333334
Q ss_pred hhhccCCCcEEEEec--cChH-HhhccccccceeccCChhHHHHHHHhCCcEec
Q 012412 327 SDETLTSHKSLVVSW--CPQL-EVLAHEATGCFVTHCGWNSTMEALSLGVPMVA 377 (464)
Q Consensus 327 ~~~~~~~~nv~~~~~--~p~~-~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~ 377 (464)
.+. .+..+.+.+- +.+. .++++|++ ||+. -.|-++=|.+.|+|.|.
T Consensus 227 ~~~--~~~~~~l~~k~sL~e~~~li~~a~l--~I~~-DSg~~HlAaA~~~P~I~ 275 (334)
T COG0859 227 AKG--LPNAVILAGKTSLEELAALIAGADL--VIGN-DSGPMHLAAALGTPTIA 275 (334)
T ss_pred HHh--cCCccccCCCCCHHHHHHHHhcCCE--EEcc-CChHHHHHHHcCCCEEE
Confidence 333 2222224433 3333 88889998 8876 78899999999999998
|
|
| >COG1817 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.14 Score=47.07 Aligned_cols=112 Identities=15% Similarity=0.141 Sum_probs=70.8
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcc--cccccccCCCCCCceEEEccCCCCCCCCCCccCHHHHHHH
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF--FYKSLHRDSSSSSIPLEAISDGYDEGGYAQAESIEAYLER 91 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 91 (464)
|||.| -.+..-|+.-+..+-++|.++||+|.+-+-+. ..+.+. ..|+.+..+...... ++.+.+..
T Consensus 1 mkVwi-DI~n~~hvhfFk~lI~elekkG~ev~iT~rd~~~v~~LLd----~ygf~~~~Igk~g~~-------tl~~Kl~~ 68 (346)
T COG1817 1 MKVWI-DIGNPPHVHFFKNLIWELEKKGHEVLITCRDFGVVTELLD----LYGFPYKSIGKHGGV-------TLKEKLLE 68 (346)
T ss_pred CeEEE-EcCCcchhhHHHHHHHHHHhCCeEEEEEEeecCcHHHHHH----HhCCCeEeecccCCc-------cHHHHHHH
Confidence 35554 22333577788999999999999998888643 223333 668888888754322 22211111
Q ss_pred HHHhCcHHHHHHHHHhcCCCCCccEEEeCCchhhHHHHHHHcCCccEEEecch
Q 012412 92 FWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQS 144 (464)
Q Consensus 92 ~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~ 144 (464)
..... ..+.++ ..+.+| |+.+. -..+-+..+|.-+|+|.+++.-+.
T Consensus 69 ~~eR~-~~L~ki----~~~~kp-dv~i~-~~s~~l~rvafgLg~psIi~~D~e 114 (346)
T COG1817 69 SAERV-YKLSKI----IAEFKP-DVAIG-KHSPELPRVAFGLGIPSIIFVDNE 114 (346)
T ss_pred HHHHH-HHHHHH----HhhcCC-ceEee-cCCcchhhHHhhcCCceEEecCCh
Confidence 11110 113333 333356 99999 567789999999999999986654
|
|
| >PRK14098 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0075 Score=61.13 Aligned_cols=133 Identities=18% Similarity=0.105 Sum_probs=80.4
Q ss_pred CceEEEEeccccc-CCHHHHHHHHHHHhhCCCeEEEEEcCccc-CcCChhhhhhccCCCcEEEEeccChH---Hhhcccc
Q 012412 278 ESVVYVSYGSFVE-LKAEEMEELAWGLKSSDQHFLWVVRESEQ-AKLPKKFSDETLTSHKSLVVSWCPQL---EVLAHEA 352 (464)
Q Consensus 278 ~~~v~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~nv~~~~~~p~~---~ll~~~~ 352 (464)
+.++++..|.+.. -..+.+-..+..+.+.+.++++.-.+... ...-.++.++ .+++|.+.++++.. .+++.+|
T Consensus 306 ~~~~i~~vgRl~~~KG~d~li~a~~~l~~~~~~lvivG~G~~~~~~~l~~l~~~--~~~~V~~~g~~~~~~~~~~~a~aD 383 (489)
T PRK14098 306 ETPLVGVIINFDDFQGAELLAESLEKLVELDIQLVICGSGDKEYEKRFQDFAEE--HPEQVSVQTEFTDAFFHLAIAGLD 383 (489)
T ss_pred CCCEEEEeccccccCcHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHHHH--CCCCEEEEEecCHHHHHHHHHhCC
Confidence 3457777787762 23344433333343346666655433210 0111222233 46789999888864 7899999
Q ss_pred ccceeccC---Ch-hHHHHHHHhCCcEeccCCcc--chhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHh
Q 012412 353 TGCFVTHC---GW-NSTMEALSLGVPMVAMPQWS--DQSTNAKYILDVWKTGLKFPIVKRDAIADCISEIL 417 (464)
Q Consensus 353 ~~~vI~Hg---G~-~s~~eal~~GvP~v~~P~~~--DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll 417 (464)
+ ++.-. |+ .+.+||+++|+|.|+....+ |.-. ...++. +.|...+..++++|.++|.+++
T Consensus 384 i--~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~--~~~~~~-~~G~l~~~~d~~~la~ai~~~l 449 (489)
T PRK14098 384 M--LLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIE--EVSEDK-GSGFIFHDYTPEALVAKLGEAL 449 (489)
T ss_pred E--EEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeee--cCCCCC-CceeEeCCCCHHHHHHHHHHHH
Confidence 9 77432 33 36789999999888765432 2211 011235 6788887778999999999876
|
|
| >PF06722 DUF1205: Protein of unknown function (DUF1205); InterPro: IPR010610 This entry represents a conserved region of unknown function within bacterial glycosyl transferases | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.00061 Score=51.85 Aligned_cols=65 Identities=17% Similarity=0.238 Sum_probs=52.0
Q ss_pred hHHHHHhhcCCCCceEEEEecccccC---C--HHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEE
Q 012412 266 EACMKWLNDRAKESVVYVSYGSFVEL---K--AEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSL 337 (464)
Q Consensus 266 ~~~~~~l~~~~~~~~v~vs~Gs~~~~---~--~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~ 337 (464)
..+..|+...+++|.|++|+||.... . ...+..++++++.+|..+|++++....+.+.+ +|+||+
T Consensus 28 ~~~P~Wl~~~~~RpRVcvT~G~~~~~~~g~~~~~~l~~ll~ala~ldvEvV~a~~~~~~~~lg~-------lP~nVR 97 (97)
T PF06722_consen 28 AVVPDWLLEPPGRPRVCVTLGTSVRMFFGPGGVPLLRRLLEALAGLDVEVVVALPAAQRAELGE-------LPDNVR 97 (97)
T ss_dssp EEEEGGGSSSTSSEEEEEEETHHHCHHHSCHHHCHHHHHHHHHHTSSSEEEEEETTCCCGGCCS--------TTTEE
T ss_pred CCCCcccccCCCCCEEEEEcCCCccccccccchHHHHHHHHHHhhCCcEEEEECCHHHHHhhCC-------CCCCCC
Confidence 45566888888999999999998742 2 25889999999999999999998876665644 888886
|
Many proteins containing this domain are members of the glycosyl transferase family 28 IPR004276 from INTERPRO.; PDB: 3OTH_A 3OTG_A 3OTI_A 3D0R_A 3D0Q_B 2P6P_A 3UYK_A 3UYL_B 3TSA_B 2YJN_A. |
| >cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS) | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.056 Score=50.48 Aligned_cols=102 Identities=12% Similarity=0.064 Sum_probs=65.4
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCC--CeEEEEeCcccccccccCCCCCCce-EEEccCCCCCCCCCCccCHHHHHHH
Q 012412 15 HCLVLTYPGQGHINPLLQFSRRLQHKG--IKVTLVTTRFFYKSLHRDSSSSSIP-LEAISDGYDEGGYAQAESIEAYLER 91 (464)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rG--h~V~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~ 91 (464)
|||++...+.|++.-+.++.++|+++. .+|++++.+...+.+.. ...+. ++.++... .....
T Consensus 1 kILii~~~~iGD~i~~~p~l~~Lk~~~P~~~I~~l~~~~~~~l~~~---~p~id~v~~~~~~~------~~~~~------ 65 (279)
T cd03789 1 RILVIRLSWIGDVVLATPLLRALKARYPDARITVLAPPWFAPLLEL---MPEVDRVIVLPKKH------GKLGL------ 65 (279)
T ss_pred CEEEEecccHHHHHHHHHHHHHHHHHCCCCEEEEEEChhhHHHHhc---CCccCEEEEcCCcc------cccch------
Confidence 689999999999999999999999974 89999999988777762 12222 12222110 00011
Q ss_pred HHHhCcHHHHHHHHHhcCCCCCccEEEeCCchhhHHHHHHHcCCccEE
Q 012412 92 FWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAP 139 (464)
Q Consensus 92 ~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~~~~~~~A~~~giP~v~ 139 (464)
.....++.++.. +.+|+++.-........++...+++..+
T Consensus 66 ------~~~~~~~~~l~~--~~~D~vi~~~~~~~~~~~~~~~~~~~~~ 105 (279)
T cd03789 66 ------GARRRLARALRR--RRYDLAIDLQGSLRSALLPFLAGAPRRI 105 (279)
T ss_pred ------HHHHHHHHHHhh--cCCCEEEECCCccHHHHHHHHhCCCeEE
Confidence 123344455544 3589999865554455566666766543
|
Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.02 Score=47.05 Aligned_cols=103 Identities=17% Similarity=0.240 Sum_probs=64.1
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEccCCCCCCCCCCccCHHHHHHHHHH
Q 012412 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGYAQAESIEAYLERFWQ 94 (464)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 94 (464)
|||+++.....| ...+++.|.++||+|++++.....+... ...++.+..++... .....++. +
T Consensus 1 KIl~i~~~~~~~---~~~~~~~L~~~g~~V~ii~~~~~~~~~~---~~~~i~~~~~~~~~--------k~~~~~~~-~-- 63 (139)
T PF13477_consen 1 KILLIGNTPSTF---IYNLAKELKKRGYDVHIITPRNDYEKYE---IIEGIKVIRLPSPR--------KSPLNYIK-Y-- 63 (139)
T ss_pred CEEEEecCcHHH---HHHHHHHHHHCCCEEEEEEcCCCchhhh---HhCCeEEEEecCCC--------CccHHHHH-H--
Confidence 578777776666 5677999999999999999965542222 25678888885221 11222221 1
Q ss_pred hCcHHHHHHHHHhcCCCCCccEEEeCCchh---hHHHHHHHcC-CccEEEec
Q 012412 95 IGPQTLTELVEKMNGSDSPVDCIVYDSILL---WALDVAKKFG-LLGAPFLT 142 (464)
Q Consensus 95 ~~~~~l~~~~~~l~~~~~p~DlVI~D~~~~---~~~~~A~~~g-iP~v~~~~ 142 (464)
..+..++++. +| |+|.+..... .+..++...+ +|.+...+
T Consensus 64 ---~~l~k~ik~~----~~-DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~~h 107 (139)
T PF13477_consen 64 ---FRLRKIIKKE----KP-DVIHCHTPSPYGLFAMLAKKLLKNKKVIYTVH 107 (139)
T ss_pred ---HHHHHHhccC----CC-CEEEEecCChHHHHHHHHHHHcCCCCEEEEec
Confidence 1233333332 45 9998876543 2455678888 88886444
|
|
| >PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.27 Score=46.49 Aligned_cols=56 Identities=21% Similarity=0.201 Sum_probs=39.0
Q ss_pred ChHHhhccccccceeccC-ChhHHHHHHHhCCcEeccCCccchhh----HHHHHHhHhcceeecc
Q 012412 343 PQLEVLAHEATGCFVTHC-GWNSTMEALSLGVPMVAMPQWSDQST----NAKYILDVWKTGLKFP 402 (464)
Q Consensus 343 p~~~ll~~~~~~~vI~Hg-G~~s~~eal~~GvP~v~~P~~~DQ~~----na~rl~~~~G~g~~l~ 402 (464)
|+..+|+.+|. +|.-+ ..+-+.||+..|+|+.++|... +.. -.+.+++. |+-..+.
T Consensus 221 Py~~~La~ad~--i~VT~DSvSMvsEA~~tG~pV~v~~l~~-~~~r~~r~~~~L~~~-g~~r~~~ 281 (311)
T PF06258_consen 221 PYLGFLAAADA--IVVTEDSVSMVSEAAATGKPVYVLPLPG-RSGRFRRFHQSLEER-GAVRPFT 281 (311)
T ss_pred cHHHHHHhCCE--EEEcCccHHHHHHHHHcCCCEEEecCCC-cchHHHHHHHHHHHC-CCEEECC
Confidence 67788998887 55554 4577899999999999999876 333 23334444 5555443
|
The function of this family is unknown. |
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.14 Score=49.00 Aligned_cols=91 Identities=14% Similarity=0.116 Sum_probs=53.1
Q ss_pred eccChH---Hhhcccccccee--cc-CC-hhHHHHHHHhCCcEeccCCcc--chhh---HHHHHHh-----------Hhc
Q 012412 340 SWCPQL---EVLAHEATGCFV--TH-CG-WNSTMEALSLGVPMVAMPQWS--DQST---NAKYILD-----------VWK 396 (464)
Q Consensus 340 ~~~p~~---~ll~~~~~~~vI--~H-gG-~~s~~eal~~GvP~v~~P~~~--DQ~~---na~rl~~-----------~~G 396 (464)
.++|+. .+++.+|+ +| ++ .| ..++.||+++|+|+|+.-..+ |.-. |+-.++. . +
T Consensus 196 ~~v~~~~l~~~y~~aDv--~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~-~ 272 (331)
T PHA01630 196 TPLPDDDIYSLFAGCDI--LFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPI-H 272 (331)
T ss_pred ccCCHHHHHHHHHhCCE--EEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccccccCCc-c
Confidence 447755 67999999 66 33 33 457899999999999966432 3211 1111100 1 2
Q ss_pred ceeeccCcCHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Q 012412 397 TGLKFPIVKRDAIADCISEILEGERGKELRRNAGKWRK 434 (464)
Q Consensus 397 ~g~~l~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~ 434 (464)
+|..++ .+.+++.+++.++|.|++-+..+++.+.-+.
T Consensus 273 ~G~~v~-~~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~ 309 (331)
T PHA01630 273 VGYFLD-PDIEDAYQKLLEALANWTPEKKKENLEGRAI 309 (331)
T ss_pred cccccC-CCHHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 454443 3678888888888876311144444444333
|
|
| >PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.041 Score=41.58 Aligned_cols=83 Identities=17% Similarity=0.198 Sum_probs=53.3
Q ss_pred cCChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHH
Q 012412 359 HCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGERGKELRRNAGKWRKLAKE 438 (464)
Q Consensus 359 HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~ 438 (464)
+|-..-+.|++++|+|+|.-+. ......+... --++.. . +.+++.+++..+++|+ +..++.+++..+.+++
T Consensus 9 ~~~~~r~~E~~a~G~~vi~~~~----~~~~~~~~~~-~~~~~~-~-~~~el~~~i~~ll~~~--~~~~~ia~~a~~~v~~ 79 (92)
T PF13524_consen 9 DGPNMRIFEAMACGTPVISDDS----PGLREIFEDG-EHIITY-N-DPEELAEKIEYLLENP--EERRRIAKNARERVLK 79 (92)
T ss_pred CCCchHHHHHHHCCCeEEECCh----HHHHHHcCCC-CeEEEE-C-CHHHHHHHHHHHHCCH--HHHHHHHHHHHHHHHH
Confidence 4455688999999999997653 3333333222 133333 3 8999999999999997 2444444444445543
Q ss_pred HHHcCCCcHHHHHHHH
Q 012412 439 AVAKGGSSDSNIDEFV 454 (464)
Q Consensus 439 ~~~~gg~~~~~~~~~~ 454 (464)
.-+....+++++
T Consensus 80 ----~~t~~~~~~~il 91 (92)
T PF13524_consen 80 ----RHTWEHRAEQIL 91 (92)
T ss_pred ----hCCHHHHHHHHH
Confidence 466666666665
|
|
| >PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.052 Score=47.44 Aligned_cols=118 Identities=13% Similarity=0.096 Sum_probs=67.1
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCC-CCCceEEEccCCCCC---CCCCCccCHHHHH
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSS-SSSIPLEAISDGYDE---GGYAQAESIEAYL 89 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~---~~~~~~~~~~~~~ 89 (464)
||||+..--|. +---+.+|+++|.+.||+|+++.+...++-.-+..+ ...++......+... ..+.-..++..-.
T Consensus 1 M~ILlTNDDGi-~a~Gi~aL~~~L~~~g~~V~VvAP~~~~Sg~g~sit~~~pl~~~~~~~~~~~~~~~~~~v~GTPaDcv 79 (196)
T PF01975_consen 1 MRILLTNDDGI-DAPGIRALAKALSALGHDVVVVAPDSEQSGTGHSITLHKPLRVTEVEPGHDPGGVEAYAVSGTPADCV 79 (196)
T ss_dssp SEEEEE-SS-T-TSHHHHHHHHHHTTTSSEEEEEEESSSTTTSTTS--SSSEEEEEEEE-TTCCSTTEEEEESS-HHHHH
T ss_pred CeEEEEcCCCC-CCHHHHHHHHHHHhcCCeEEEEeCCCCCcCcceeecCCCCeEEEEEEecccCCCCCEEEEcCcHHHHH
Confidence 68888887776 666788999999878899999999887766543211 233444333211111 0111222332222
Q ss_pred HHHHHhCcHHHHHHHHHhcCCCCCccEEEeCCc-------------hhhHHHHHHHcCCccEEEecch
Q 012412 90 ERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSI-------------LLWALDVAKKFGLLGAPFLTQS 144 (464)
Q Consensus 90 ~~~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~-------------~~~~~~~A~~~giP~v~~~~~~ 144 (464)
. --+..+... .++|+||+..- +..++.-|...|||.|.+|...
T Consensus 80 ~-----------~al~~~~~~-~~pDLViSGiN~G~N~g~~v~~SGTVgAA~ea~~~GipaIA~S~~~ 135 (196)
T PF01975_consen 80 K-----------LALDGLLPD-KKPDLVISGINHGANLGTDVLYSGTVGAAMEAALRGIPAIAVSLDS 135 (196)
T ss_dssp H-----------HHHHCTSTT-SS-SEEEEEEEES---GGGGGG-HHHHHHHHHHHTTSEEEEEEEES
T ss_pred H-----------HHHHhhhcc-CCCCEEEECCCCCccCCcCcccccHHHHHHHHHHcCCCeEEEeccc
Confidence 1 122333322 22599997541 1335666788999999987765
|
This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A .... |
| >TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.26 Score=49.43 Aligned_cols=105 Identities=13% Similarity=0.112 Sum_probs=70.9
Q ss_pred EEeccChH---Hhhccccccceec---cCChh-HHHHHHHhCCc----EeccCCccchhhHHHHHHhHhcceeeccCcCH
Q 012412 338 VVSWCPQL---EVLAHEATGCFVT---HCGWN-STMEALSLGVP----MVAMPQWSDQSTNAKYILDVWKTGLKFPIVKR 406 (464)
Q Consensus 338 ~~~~~p~~---~ll~~~~~~~vI~---HgG~~-s~~eal~~GvP----~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~ 406 (464)
+.+.+++. .++..+|+ ++. +-|+| ++.||+++|+| +|+.-..+ .+. .+ +-|+.++..+.
T Consensus 340 l~~~~~~~el~aly~aaDv--~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G----~~~---~l-~~gllVnP~d~ 409 (456)
T TIGR02400 340 LNRSYDREELMALYRAADV--GLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAG----AAQ---EL-NGALLVNPYDI 409 (456)
T ss_pred EcCCCCHHHHHHHHHhCcE--EEECccccccCccHHHHHHhcCCCCceEEEeCCCC----ChH---Hh-CCcEEECCCCH
Confidence 34566666 66889999 774 44654 77899999999 66554433 222 23 44667776789
Q ss_pred HHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 012412 407 DAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLA 458 (464)
Q Consensus 407 ~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l~ 458 (464)
++++++|.++|+.+. ++-+++.+++.+.+.. -+...-++++++.|.
T Consensus 410 ~~lA~aI~~aL~~~~-~er~~r~~~~~~~v~~-----~~~~~W~~~~l~~l~ 455 (456)
T TIGR02400 410 DGMADAIARALTMPL-EEREERHRAMMDKLRK-----NDVQRWREDFLSDLN 455 (456)
T ss_pred HHHHHHHHHHHcCCH-HHHHHHHHHHHHHHhh-----CCHHHHHHHHHHHhh
Confidence 999999999998642 2455566666666552 556666777777663
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib |
| >PF10093 DUF2331: Uncharacterized protein conserved in bacteria (DUF2331); InterPro: IPR016633 This entry describes a conserved hypothetical protein that typically is encoded next to the gene efp for translation elongation factor P | Back alignment and domain information |
|---|
Probab=95.82 E-value=1.9 Score=41.46 Aligned_cols=48 Identities=27% Similarity=0.263 Sum_probs=38.1
Q ss_pred cEEEEeccChH---HhhccccccceeccCChhHHHHHHHhCCcEec--cCCccchhhHHH
Q 012412 335 KSLVVSWCPQL---EVLAHEATGCFVTHCGWNSTMEALSLGVPMVA--MPQWSDQSTNAK 389 (464)
Q Consensus 335 nv~~~~~~p~~---~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~--~P~~~DQ~~na~ 389 (464)
.+.+.+|+||. .||-.||+ -+-. |=-|+.-|..+|+|.|= .| |.++|.
T Consensus 245 ~l~~lPF~~Q~~yD~LLw~cD~--NfVR-GEDSfVRAqwAgkPFvWhIYp----Q~d~aH 297 (374)
T PF10093_consen 245 TLHVLPFVPQDDYDRLLWACDF--NFVR-GEDSFVRAQWAGKPFVWHIYP----QEDDAH 297 (374)
T ss_pred EEEECCCCCHHHHHHHHHhCcc--ceEe-cchHHHHHHHhCCCceEecCc----CchhhH
Confidence 34556999987 89999998 6666 66799999999999983 66 666665
|
The function is unknown. |
| >cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.16 Score=51.17 Aligned_cols=105 Identities=16% Similarity=0.139 Sum_probs=65.0
Q ss_pred EEEeccChH---Hhhccccccceec---cCChh-HHHHHHHhCCc----EeccCCccchhhHHHHHHhHhcceeeccCcC
Q 012412 337 LVVSWCPQL---EVLAHEATGCFVT---HCGWN-STMEALSLGVP----MVAMPQWSDQSTNAKYILDVWKTGLKFPIVK 405 (464)
Q Consensus 337 ~~~~~~p~~---~ll~~~~~~~vI~---HgG~~-s~~eal~~GvP----~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~ 405 (464)
.+.+++++. .++..+|+ +|. +-|+| ++.||+++|+| +|+.-..+ .+.- . .-|+.++..+
T Consensus 344 ~~~g~v~~~el~~~y~~aDv--~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G----~~~~---~-~~g~lv~p~d 413 (460)
T cd03788 344 YLYRSLPREELAALYRAADV--ALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAG----AAEE---L-SGALLVNPYD 413 (460)
T ss_pred EEeCCCCHHHHHHHHHhccE--EEeCccccccCcccceeEEEecCCCceEEEecccc----chhh---c-CCCEEECCCC
Confidence 344677766 67899999 773 44654 66999999999 54432222 1111 3 4466666678
Q ss_pred HHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Q 012412 406 RDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASL 457 (464)
Q Consensus 406 ~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l 457 (464)
.++++++|.++|+++. .+-+++.++..+.+. .-+...-+++++++|
T Consensus 414 ~~~la~ai~~~l~~~~-~e~~~~~~~~~~~v~-----~~~~~~w~~~~l~~l 459 (460)
T cd03788 414 IDEVADAIHRALTMPL-EERRERHRKLREYVR-----THDVQAWANSFLDDL 459 (460)
T ss_pred HHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHH-----hCCHHHHHHHHHHhh
Confidence 9999999999998751 123333333333333 245566666666655
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. |
| >PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.038 Score=46.12 Aligned_cols=98 Identities=14% Similarity=0.106 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEccCCCCCCCCCCccCHHHHHHHHHHhCcHHHHHHHHHh
Q 012412 28 NPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGYAQAESIEAYLERFWQIGPQTLTELVEKM 107 (464)
Q Consensus 28 ~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 107 (464)
.-+..|+++|.++||+|++++......... ....++.+..++..... . .......+ ..+..++ .
T Consensus 5 ~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~---~-~~~~~~~~--------~~~~~~l--~ 68 (160)
T PF13579_consen 5 RYVRELARALAARGHEVTVVTPQPDPEDDE--EEEDGVRVHRLPLPRRP---W-PLRLLRFL--------RRLRRLL--A 68 (160)
T ss_dssp HHHHHHHHHHHHTT-EEEEEEE---GGG-S--EEETTEEEEEE--S-SS---S-GGGHCCHH--------HHHHHHC--H
T ss_pred HHHHHHHHHHHHCCCEEEEEecCCCCcccc--cccCCceEEeccCCccc---h-hhhhHHHH--------HHHHHHH--h
Confidence 457889999999999999999765544321 12457888877722211 0 00111111 1122222 1
Q ss_pred cCCCCCccEEEeCCch-hhHHHHHH-HcCCccEEEec
Q 012412 108 NGSDSPVDCIVYDSIL-LWALDVAK-KFGLLGAPFLT 142 (464)
Q Consensus 108 ~~~~~p~DlVI~D~~~-~~~~~~A~-~~giP~v~~~~ 142 (464)
... .++|+|.+.... .....+++ ..++|++....
T Consensus 69 ~~~-~~~Dvv~~~~~~~~~~~~~~~~~~~~p~v~~~h 104 (160)
T PF13579_consen 69 ARR-ERPDVVHAHSPTAGLVAALARRRRGIPLVVTVH 104 (160)
T ss_dssp HCT----SEEEEEHHHHHHHHHHHHHHHT--EEEE-S
T ss_pred hhc-cCCeEEEecccchhHHHHHHHHccCCcEEEEEC
Confidence 122 335999987643 22333444 88999988544
|
|
| >TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 | Back alignment and domain information |
|---|
Probab=95.36 E-value=0.11 Score=52.76 Aligned_cols=92 Identities=11% Similarity=0.120 Sum_probs=69.7
Q ss_pred CcEEEEeccC--hH-HhhccccccceeccC---ChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHH
Q 012412 334 HKSLVVSWCP--QL-EVLAHEATGCFVTHC---GWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRD 407 (464)
Q Consensus 334 ~nv~~~~~~p--~~-~ll~~~~~~~vI~Hg---G~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~ 407 (464)
.+|.+.++.. +. ..+..+.+ +|.=+ |.++.+||+.+|+|+| .......+++. .=|..+ -+..
T Consensus 409 ~~v~f~gy~~e~dl~~~~~~arl--~id~s~~eg~~~~ieAiS~GiPqI-------nyg~~~~V~d~-~NG~li--~d~~ 476 (519)
T TIGR03713 409 ERIAFTTLTNEEDLISALDKLRL--IIDLSKEPDLYTQISGISAGIPQI-------NKVETDYVEHN-KNGYII--DDIS 476 (519)
T ss_pred cEEEEEecCCHHHHHHHHhhheE--EEECCCCCChHHHHHHHHcCCCee-------ecCCceeeEcC-CCcEEe--CCHH
Confidence 6788889888 33 77888888 88544 7789999999999999 44456667777 777777 5789
Q ss_pred HHHHHHHHHhcCC-chHHHHHHHHHHHHHHH
Q 012412 408 AIADCISEILEGE-RGKELRRNAGKWRKLAK 437 (464)
Q Consensus 408 ~l~~~i~~ll~~~-~~~~~~~~a~~l~~~~~ 437 (464)
+|.+++..+|.+. .+..+...+-+.+++..
T Consensus 477 ~l~~al~~~L~~~~~wn~~~~~sy~~~~~yS 507 (519)
T TIGR03713 477 ELLKALDYYLDNLKNWNYSLAYSIKLIDDYS 507 (519)
T ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHHHHhh
Confidence 9999999999986 24455555555555554
|
This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=95.13 E-value=1.7 Score=39.09 Aligned_cols=36 Identities=25% Similarity=0.366 Sum_probs=29.1
Q ss_pred eccChHHhhccccccceecc-CChhHHHHHHHhCCcEec
Q 012412 340 SWCPQLEVLAHEATGCFVTH-CGWNSTMEALSLGVPMVA 377 (464)
Q Consensus 340 ~~~p~~~ll~~~~~~~vI~H-gG~~s~~eal~~GvP~v~ 377 (464)
++=|+-+.|+.++. +|+- -..+-++||++.|+|+.+
T Consensus 234 g~NPY~~~La~Ady--ii~TaDSinM~sEAasTgkPv~~ 270 (329)
T COG3660 234 GYNPYIDMLAAADY--IISTADSINMCSEAASTGKPVFI 270 (329)
T ss_pred CCCchHHHHhhcce--EEEecchhhhhHHHhccCCCeEE
Confidence 45588999998887 6654 456888999999999976
|
|
| >COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=94.27 E-value=1.6 Score=41.13 Aligned_cols=81 Identities=26% Similarity=0.427 Sum_probs=57.0
Q ss_pred CCcEEEEeccCh---HHhhccccccceecc---CChhH-HHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcC
Q 012412 333 SHKSLVVSWCPQ---LEVLAHEATGCFVTH---CGWNS-TMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVK 405 (464)
Q Consensus 333 ~~nv~~~~~~p~---~~ll~~~~~~~vI~H---gG~~s-~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~ 405 (464)
.+++.+.++++. ..++..+++ ++.- .|.|. +.||+++|+|++... .......+.+. +.|......+
T Consensus 256 ~~~v~~~g~~~~~~~~~~~~~~~~--~v~ps~~e~~~~~~~Ea~a~g~pvi~~~----~~~~~e~~~~~-~~g~~~~~~~ 328 (381)
T COG0438 256 EDNVKFLGYVPDEELAELLASADV--FVLPSLSEGFGLVLLEAMAAGTPVIASD----VGGIPEVVEDG-ETGLLVPPGD 328 (381)
T ss_pred CCcEEEecccCHHHHHHHHHhCCE--EEeccccccchHHHHHHHhcCCcEEECC----CCChHHHhcCC-CceEecCCCC
Confidence 478888999992 266777887 6655 35544 599999999997654 44444444444 4466333337
Q ss_pred HHHHHHHHHHHhcCC
Q 012412 406 RDAIADCISEILEGE 420 (464)
Q Consensus 406 ~~~l~~~i~~ll~~~ 420 (464)
.+.+..++..++++.
T Consensus 329 ~~~~~~~i~~~~~~~ 343 (381)
T COG0438 329 VEELADALEQLLEDP 343 (381)
T ss_pred HHHHHHHHHHHhcCH
Confidence 899999999999885
|
|
| >PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT | Back alignment and domain information |
|---|
Probab=93.98 E-value=0.38 Score=44.60 Aligned_cols=102 Identities=17% Similarity=0.133 Sum_probs=62.4
Q ss_pred CCCceEEEEeccccc-------CC-HHHHHHHHHHHhhC-CCeEEEEEcCcccCcCChhhhhhc-cCCCcEEEEeccChH
Q 012412 276 AKESVVYVSYGSFVE-------LK-AEEMEELAWGLKSS-DQHFLWVVRESEQAKLPKKFSDET-LTSHKSLVVSWCPQL 345 (464)
Q Consensus 276 ~~~~~v~vs~Gs~~~-------~~-~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~~~~-~~~~nv~~~~~~p~~ 345 (464)
.+++.|++.+-.... .. ....+.+....+.. +.+++++.++........++.+.. .....+.+.+-++-.
T Consensus 115 ~~~~~vlv~lQ~~~D~~i~~~~~~~~~~~~~l~~~~~~~p~~~lvvK~HP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (269)
T PF05159_consen 115 KNKKYVLVPLQVENDSQIRYHSPSQADFLDMLESFAKENPDAKLVVKPHPDERGGNKYSYLEELPNLPNVVIIDDDVNLY 194 (269)
T ss_pred CCCCEEEEEeeCCcCcchhccCCcHhHHHHHHHHHHHHCCCCEEEEEECchhhCCCChhHhhhhhcCCCeEEECCCCCHH
Confidence 355677776644331 11 23333344444444 678899888743332222322221 122334445678888
Q ss_pred HhhccccccceeccCChhHHHHHHHhCCcEeccCC
Q 012412 346 EVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQ 380 (464)
Q Consensus 346 ~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~ 380 (464)
+|+.+|+. |||-. .++-.||+.+|+|++++..
T Consensus 195 ~Ll~~s~~--Vvtin-StvGlEAll~gkpVi~~G~ 226 (269)
T PF05159_consen 195 ELLEQSDA--VVTIN-STVGLEALLHGKPVIVFGR 226 (269)
T ss_pred HHHHhCCE--EEEEC-CHHHHHHHHcCCceEEecC
Confidence 99999999 99884 4577999999999998663
|
Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport |
| >PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [] | Back alignment and domain information |
|---|
Probab=93.59 E-value=0.58 Score=39.91 Aligned_cols=115 Identities=22% Similarity=0.181 Sum_probs=59.7
Q ss_pred EEEcCCCccChHHHHHHHHHH-HhC-CCeEEEEeCccccccc-----ccCCCCCCceEEEccCCCCCCCCCCccCHHHHH
Q 012412 17 LVLTYPGQGHINPLLQFSRRL-QHK-GIKVTLVTTRFFYKSL-----HRDSSSSSIPLEAISDGYDEGGYAQAESIEAYL 89 (464)
Q Consensus 17 l~~~~~~~GH~~p~l~la~~L-~~r-Gh~V~~~~~~~~~~~~-----~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 89 (464)
+++. ++.||+.-++.|.+.+ .++ .++..+++........ ++.. .....+..+|..... .-....++...+
T Consensus 2 l~v~-gsGGHt~eml~L~~~~~~~~~~~~~~ivt~~d~~S~~k~~~~~~~~-~~~~~~~~~~r~r~v-~q~~~~~~~~~l 78 (170)
T PF08660_consen 2 LVVL-GSGGHTAEMLRLLKALDNDRYQPRTYIVTEGDKQSRSKAEQLEKSS-SKRHKILEIPRAREV-GQSYLTSIFTTL 78 (170)
T ss_pred EEEE-cCcHHHHHHHHHHHHhhhhcCCCcEEEEEcCCcccHHHHHHHHHhc-cccceeeccceEEEe-chhhHhhHHHHH
Confidence 3443 4559999999999999 333 5666666665443332 1000 111134444422111 001111122222
Q ss_pred HHHHHhCcHHHHHHHHHhcCCCCCccEEEeCCch--hhHHHHHHHc------CCccEEEecch
Q 012412 90 ERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSIL--LWALDVAKKF------GLLGAPFLTQS 144 (464)
Q Consensus 90 ~~~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~--~~~~~~A~~~------giP~v~~~~~~ 144 (464)
..+. ..+.-+.+. +| |+||++.-- ...+.+|..+ |.+.|.+.+..
T Consensus 79 ~~~~----~~~~il~r~-----rP-dvii~nGpg~~vp~~~~~~l~~~~~~~~~kiIyIES~a 131 (170)
T PF08660_consen 79 RAFL----QSLRILRRE-----RP-DVIISNGPGTCVPVCLAAKLLRLLGLRGSKIIYIESFA 131 (170)
T ss_pred HHHH----HHHHHHHHh-----CC-CEEEEcCCceeeHHHHHHHHHHHhhccCCcEEEEEeee
Confidence 2222 122222222 56 999998644 4467788888 99999876654
|
|
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=93.50 E-value=0.63 Score=50.15 Aligned_cols=106 Identities=13% Similarity=0.118 Sum_probs=68.0
Q ss_pred eccChH---Hhhccccccceec---cCChh-HHHHHHHhCCc---EeccCCccchhhHHHHHHhHhc-ceeeccCcCHHH
Q 012412 340 SWCPQL---EVLAHEATGCFVT---HCGWN-STMEALSLGVP---MVAMPQWSDQSTNAKYILDVWK-TGLKFPIVKRDA 408 (464)
Q Consensus 340 ~~~p~~---~ll~~~~~~~vI~---HgG~~-s~~eal~~GvP---~v~~P~~~DQ~~na~rl~~~~G-~g~~l~~~~~~~ 408 (464)
.++|.. .++..+|+ ++. .-|+| ++.|++++|+| +++++-+ ...+.- + | .|+.++..+.++
T Consensus 362 ~~v~~~el~aly~~ADv--fvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~---~G~~~~---l-~~~allVnP~D~~~ 432 (797)
T PLN03063 362 CSVDFNYLCALYAITDV--MLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEF---AGAGQS---L-GAGALLVNPWNITE 432 (797)
T ss_pred CCCCHHHHHHHHHhCCE--EEeCccccccCcchhhHheeecCCCCCEEeeCC---cCchhh---h-cCCeEEECCCCHHH
Confidence 345544 78889999 774 44776 56899999999 4444422 122222 3 4 477777789999
Q ss_pred HHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHhh
Q 012412 409 IADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLACS 460 (464)
Q Consensus 409 l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l~~~ 460 (464)
++++|.++|..+. ++-+++.+++.+.++. -+...-.+++++.|...
T Consensus 433 lA~AI~~aL~m~~-~er~~r~~~~~~~v~~-----~~~~~Wa~~fl~~l~~~ 478 (797)
T PLN03063 433 VSSAIKEALNMSD-EERETRHRHNFQYVKT-----HSAQKWADDFMSELNDI 478 (797)
T ss_pred HHHHHHHHHhCCH-HHHHHHHHHHHHhhhh-----CCHHHHHHHHHHHHHHH
Confidence 9999999998431 1444555556665553 34455566667766554
|
|
| >COG0496 SurE Predicted acid phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.50 E-value=1.7 Score=39.27 Aligned_cols=113 Identities=16% Similarity=0.155 Sum_probs=66.9
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCC-CCCCceEEEccCCCCCCCCCCccCHHHHHHHH
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDS-SSSSIPLEAISDGYDEGGYAQAESIEAYLERF 92 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 92 (464)
||||+..--| =|---+.+|+++|. .+++|+++.+...++-..++. ....++...+... .+....++..-
T Consensus 1 mrILlTNDDG-i~a~Gi~aL~~al~-~~~dV~VVAP~~~qSg~s~slTl~~Plr~~~~~~~----~~av~GTPaDC---- 70 (252)
T COG0496 1 MRILLTNDDG-IHAPGIRALARALR-EGADVTVVAPDREQSGASHSLTLHEPLRVRQVDNG----AYAVNGTPADC---- 70 (252)
T ss_pred CeEEEecCCc-cCCHHHHHHHHHHh-hCCCEEEEccCCCCcccccccccccCceeeEeccc----eEEecCChHHH----
Confidence 5677665554 46667788899998 999999999998877665331 2333444444421 11111222211
Q ss_pred HHhCcHHHHHHHHHhcCCCCCccEEEeCCc-------------hhhHHHHHHHcCCccEEEecch
Q 012412 93 WQIGPQTLTELVEKMNGSDSPVDCIVYDSI-------------LLWALDVAKKFGLLGAPFLTQS 144 (464)
Q Consensus 93 ~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~-------------~~~~~~~A~~~giP~v~~~~~~ 144 (464)
+.--+..+..+..| |+||+..- +..+++=|..+|||.|.+|...
T Consensus 71 -------V~lal~~l~~~~~p-DLVvSGIN~G~Nlg~dv~ySGTVaaA~Ea~~~GipsIA~S~~~ 127 (252)
T COG0496 71 -------VILGLNELLKEPRP-DLVVSGINAGANLGDDVIYSGTVAAAMEAALLGIPAIAISLAY 127 (252)
T ss_pred -------HHHHHHHhccCCCC-CEEEeCccCCCccccceeeeehHHHHHHHHHcCccceeeeehh
Confidence 11223344433235 99997542 2345555789999999987764
|
|
| >TIGR02919 accessory Sec system glycosyltransferase GtfB | Back alignment and domain information |
|---|
Probab=93.47 E-value=1.2 Score=44.30 Aligned_cols=140 Identities=12% Similarity=0.157 Sum_probs=87.2
Q ss_pred CCceEEEEecccccCCHHHHHHHHHHHhhCC-CeEEEEEcCcccCcCChhhhhhccCCCcEEEE-eccChH--Hhhcccc
Q 012412 277 KESVVYVSYGSFVELKAEEMEELAWGLKSSD-QHFLWVVRESEQAKLPKKFSDETLTSHKSLVV-SWCPQL--EVLAHEA 352 (464)
Q Consensus 277 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~-~~~p~~--~ll~~~~ 352 (464)
...++.+| +.+.+..+....++++ ..|-+..+.. ..+.+.+. ..-+|+.+. ++.++. +++..|+
T Consensus 282 ~~~~l~~t-------~s~~I~~i~~Lv~~lPd~~f~Iga~te----~s~kL~~L-~~y~nvvly~~~~~~~l~~ly~~~d 349 (438)
T TIGR02919 282 RKQALILT-------NSDQIEHLEEIVQALPDYHFHIAALTE----MSSKLMSL-DKYDNVKLYPNITTQKIQELYQTCD 349 (438)
T ss_pred cccEEEEC-------CHHHHHHHHHHHHhCCCcEEEEEecCc----ccHHHHHH-HhcCCcEEECCcChHHHHHHHHhcc
Confidence 34466665 2566666666666654 4655533322 11222221 122777776 567733 9999999
Q ss_pred ccceeccCC--hhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcCCchHHHHHHHH
Q 012412 353 TGCFVTHCG--WNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGERGKELRRNAG 430 (464)
Q Consensus 353 ~~~vI~HgG--~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~~~~~~~~~~a~ 430 (464)
+=+-|+||+ ..++.||+.+|+|++..=..... ...+.. |...+.-+.+++.++|.++|.++ +.++++..
T Consensus 350 lyLdin~~e~~~~al~eA~~~G~pI~afd~t~~~---~~~i~~----g~l~~~~~~~~m~~~i~~lL~d~--~~~~~~~~ 420 (438)
T TIGR02919 350 IYLDINHGNEILNAVRRAFEYNLLILGFEETAHN---RDFIAS----ENIFEHNEVDQLISKLKDLLNDP--NQFRELLE 420 (438)
T ss_pred EEEEccccccHHHHHHHHHHcCCcEEEEecccCC---cccccC----CceecCCCHHHHHHHHHHHhcCH--HHHHHHHH
Confidence 988889876 47899999999999975533211 111111 33344567899999999999997 35666665
Q ss_pred HHHHHHH
Q 012412 431 KWRKLAK 437 (464)
Q Consensus 431 ~l~~~~~ 437 (464)
+-++.+.
T Consensus 421 ~q~~~a~ 427 (438)
T TIGR02919 421 QQREHAN 427 (438)
T ss_pred HHHHHhc
Confidence 5554443
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. |
| >PRK13932 stationary phase survival protein SurE; Provisional | Back alignment and domain information |
|---|
Probab=93.44 E-value=2.4 Score=38.65 Aligned_cols=116 Identities=15% Similarity=0.100 Sum_probs=65.6
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccC-CCCCCceEEEccCCCCCCCCCCccCHHHHHH
Q 012412 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRD-SSSSSIPLEAISDGYDEGGYAQAESIEAYLE 90 (464)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 90 (464)
++||||+..--|. |---+.+|+++|.+.| +|+++.+...++-.-++ .....+++..+...-....+....++..-..
T Consensus 4 ~~M~ILltNDDGi-~a~Gi~aL~~~l~~~g-~V~VvAP~~~~Sg~g~ait~~~pl~~~~~~~~~~~~~y~v~GTPaDCV~ 81 (257)
T PRK13932 4 KKPHILVCNDDGI-EGEGIHVLAASMKKIG-RVTVVAPAEPHSGMSHAMTLGVPLRIKEYQKNNRFFGYTVSGTPVDCIK 81 (257)
T ss_pred CCCEEEEECCCCC-CCHHHHHHHHHHHhCC-CEEEEcCCCCCCCCcccccCCCCeEEEEEccCCCceEEEEcCcHHHHHH
Confidence 4679998766654 3356888999998888 79999998766655432 1233455555431100001112222222211
Q ss_pred HHHHhCcHHHHHHHHHhcCCCCCccEEEeCCc-------------hhhHHHHHHHcCCccEEEec
Q 012412 91 RFWQIGPQTLTELVEKMNGSDSPVDCIVYDSI-------------LLWALDVAKKFGLLGAPFLT 142 (464)
Q Consensus 91 ~~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~-------------~~~~~~~A~~~giP~v~~~~ 142 (464)
--+..+... + +|+||+..- +..++.-|..+|||.|.+|.
T Consensus 82 -----------lal~~~~~~-~-pDLVvSGIN~G~N~G~dv~ySGTVgAA~Ea~~~GiPsIA~S~ 133 (257)
T PRK13932 82 -----------VALSHILPE-K-PDLIVSGINYGSNTATNTLYSGTVAAALEGAIQGIPSLAFSL 133 (257)
T ss_pred -----------HHHHhhcCC-C-CCEEEECCcCCCCCCcCEecchhHHHHHHHHHcCCCeEEEEc
Confidence 112222221 3 499997542 23455667889999999875
|
|
| >PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria | Back alignment and domain information |
|---|
Probab=93.23 E-value=0.17 Score=49.34 Aligned_cols=141 Identities=15% Similarity=0.179 Sum_probs=79.9
Q ss_pred HHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEe-ccChHHhhccccccceeccCChhHHHHHHHhCCc
Q 012412 296 MEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVS-WCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVP 374 (464)
Q Consensus 296 ~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~-~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP 374 (464)
...+. .+...+..+++..++........... ..+++...+ ..+..++|..+|+ +||=- .+.+.|.+..++|
T Consensus 219 ~~~l~-~~~~~~~~li~k~Hp~~~~~~~~~~~----~~~~i~~~~~~~~~~~ll~~aDi--LITDy-SSi~fD~~~l~KP 290 (369)
T PF04464_consen 219 FEKLN-FLLKNNYVLIIKPHPNMKKKFKDFKE----DNSNIIFVSDNEDIYDLLAAADI--LITDY-SSIIFDFLLLNKP 290 (369)
T ss_dssp HHHHH-HHHTTTEEEEE--SHHHHTT----TT-----TTTEEE-TT-S-HHHHHHT-SE--EEESS--THHHHHGGGT--
T ss_pred HHHHH-HHhCCCcEEEEEeCchhhhchhhhhc----cCCcEEECCCCCCHHHHHHhcCE--EEEec-hhHHHHHHHhCCC
Confidence 34444 66667788888876643332221111 457887764 5567799999999 99985 5688999999999
Q ss_pred EeccCCccchhhHHHHHHhHhcceeecc-------CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHcCCCcH
Q 012412 375 MVAMPQWSDQSTNAKYILDVWKTGLKFP-------IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSD 447 (464)
Q Consensus 375 ~v~~P~~~DQ~~na~rl~~~~G~g~~l~-------~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~ 447 (464)
++......|++... . |.-.... --+.++|.++|..++.++ ..++++.++..+.+-. ..+|.+++
T Consensus 291 iify~~D~~~Y~~~-----r-g~~~~~~~~~pg~~~~~~~eL~~~i~~~~~~~--~~~~~~~~~~~~~~~~-~~Dg~s~e 361 (369)
T PF04464_consen 291 IIFYQPDLEEYEKE-----R-GFYFDYEEDLPGPIVYNFEELIEAIENIIENP--DEYKEKREKFRDKFFK-YNDGNSSE 361 (369)
T ss_dssp EEEE-TTTTTTTTT-----S-SBSS-TTTSSSS-EESSHHHHHHHHTTHHHHH--HHTHHHHHHHHHHHST-T--S-HHH
T ss_pred EEEEeccHHHHhhc-----c-CCCCchHhhCCCceeCCHHHHHHHHHhhhhCC--HHHHHHHHHHHHHhCC-CCCchHHH
Confidence 99876555655322 2 3333321 357899999999998765 2455666666666643 23455444
Q ss_pred HHHHHH
Q 012412 448 SNIDEF 453 (464)
Q Consensus 448 ~~~~~~ 453 (464)
+.++.+
T Consensus 362 ri~~~I 367 (369)
T PF04464_consen 362 RIVNYI 367 (369)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444443
|
They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D. |
| >PRK13933 stationary phase survival protein SurE; Provisional | Back alignment and domain information |
|---|
Probab=92.79 E-value=3.1 Score=37.87 Aligned_cols=115 Identities=10% Similarity=0.101 Sum_probs=62.5
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCC-CCCCceEEEcc-CCCCCCCCCCccCHHHHHHH
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDS-SSSSIPLEAIS-DGYDEGGYAQAESIEAYLER 91 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~-~~~~~~~~~i~-~~~~~~~~~~~~~~~~~~~~ 91 (464)
||||+..--|. |---+.+|+++|.+ +|+|+++.+...++-.-++. ....+....+. ++.....+.-..++..-..
T Consensus 1 M~ILvtNDDGi-~apGl~aL~~~l~~-~~~V~VvAP~~~~Sg~g~sit~~~pl~~~~~~~~~~~~~~~~v~GTPaDcV~- 77 (253)
T PRK13933 1 MNILLTNDDGI-NAEGINTLAELLSK-YHEVIIVAPENQRSASSHSITIYEPIIIKEVKLEGINSKAYSISGTPADCVR- 77 (253)
T ss_pred CeEEEEcCCCC-CChhHHHHHHHHHh-CCcEEEEccCCCCccccccccCCCCeEEEeeccCCCCccEEEECCcHHHHHH-
Confidence 57887766655 33448889999964 68999999987766544321 12334444433 1000001111122222111
Q ss_pred HHHhCcHHHHHHHHHhcCCCCCccEEEeCCc-------------hhhHHHHHHHcCCccEEEecc
Q 012412 92 FWQIGPQTLTELVEKMNGSDSPVDCIVYDSI-------------LLWALDVAKKFGLLGAPFLTQ 143 (464)
Q Consensus 92 ~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~-------------~~~~~~~A~~~giP~v~~~~~ 143 (464)
--+..+.. .++|+||+..- +..++.-|..+|||.+.+|..
T Consensus 78 ----------lal~~l~~--~~pDLVvSGIN~G~N~g~dv~ySGTVgAA~ea~~~GiPsiA~S~~ 130 (253)
T PRK13933 78 ----------VALDKLVP--DNIDMVISGINKGLNIGNDILYSGTVSAAIEGAIYKVPSIAVSAD 130 (253)
T ss_pred ----------HHHHHhcC--CCCCEEEECCcCCCCCCcCCccchhHHHHHHHHHcCCCeEEEEec
Confidence 11122332 23499997542 234566678899999998753
|
|
| >TIGR00087 surE 5'/3'-nucleotidase SurE | Back alignment and domain information |
|---|
Probab=92.05 E-value=4.3 Score=36.87 Aligned_cols=114 Identities=12% Similarity=0.031 Sum_probs=64.4
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccC-CCCCCceEEEccCCCCCCCCCCccCHHHHHHHH
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRD-SSSSSIPLEAISDGYDEGGYAQAESIEAYLERF 92 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 92 (464)
||||+..--| =|---+.+|+++|.+.| +|+++.+...+.-.-++ .....+++..++..-....+....++..-...
T Consensus 1 M~ILltNDDG-i~a~Gi~aL~~~l~~~g-~V~VvAP~~~~Sg~g~ait~~~pl~~~~~~~~~~~~~~~v~GTPaDcv~~- 77 (244)
T TIGR00087 1 MKILLTNDDG-IHSPGIRALYQALKELG-EVTVVAPARQRSGTGHSLTLFEPLRVGQVKVKNGAHIYAVDGTPTDCVIL- 77 (244)
T ss_pred CeEEEECCCC-CCCHhHHHHHHHHHhCC-CEEEEeCCCCccccccCcCCCCCeEEEEeccCCCccEEEEcCcHHHHHHH-
Confidence 5777665555 34456788999999888 89999998777666532 12334555555410000011112222221111
Q ss_pred HHhCcHHHHHHHHHhcCCCCCccEEEeCCc-------------hhhHHHHHHHcCCccEEEec
Q 012412 93 WQIGPQTLTELVEKMNGSDSPVDCIVYDSI-------------LLWALDVAKKFGLLGAPFLT 142 (464)
Q Consensus 93 ~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~-------------~~~~~~~A~~~giP~v~~~~ 142 (464)
-+..+.. .++|+||+..- +..++.-|..+|||.+.+|.
T Consensus 78 ----------gl~~l~~--~~pDLVvSGiN~G~N~g~~v~ySGTVgAA~ea~~~GipaiA~S~ 128 (244)
T TIGR00087 78 ----------GINELMP--EVPDLVISGINAGENLGTDVTYSGTVGAAMEAAIHGVPAIAISL 128 (244)
T ss_pred ----------HHHHhcc--CCCCeEEeccccCCCCCccEecchhHHHHHHHHHcCCCeEEEEe
Confidence 1122222 23499997542 23456667889999999875
|
E. coli SurE is Recommended cutoffs are 15 for homology, 40 for probable orthology, and 200 for orthology with full-length homology. |
| >PRK13935 stationary phase survival protein SurE; Provisional | Back alignment and domain information |
|---|
Probab=92.03 E-value=4.3 Score=36.95 Aligned_cols=114 Identities=9% Similarity=-0.024 Sum_probs=62.7
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCC-CCCCceEEEccCCCCCCCCCCccCHHHHHHHH
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDS-SSSSIPLEAISDGYDEGGYAQAESIEAYLERF 92 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 92 (464)
||||+..--|. |---+.+|+++|++ +|+|+++.+...++-.-++. ....+.+..+...-....+....++..-...
T Consensus 1 M~ILlTNDDGi-~a~Gi~aL~~~l~~-~~~V~VvAP~~~qSg~g~ait~~~pl~~~~~~~~~~~~~y~v~GTPaDcV~l- 77 (253)
T PRK13935 1 MNILVTNDDGI-TSPGIIILAEYLSE-KHEVFVVAPDKERSATGHAITIRVPLWAKKVFISERFVAYATTGTPADCVKL- 77 (253)
T ss_pred CeEEEECCCCC-CCHHHHHHHHHHHh-CCcEEEEccCCCCccccccccCCCCceEEEeecCCCccEEEECCcHHHHHHH-
Confidence 57777766664 44568889999964 68999999987766555321 1233444444310000011122222222111
Q ss_pred HHhCcHHHHHHHHHhcCCCCCccEEEeCCc-------------hhhHHHHHHHcCCccEEEec
Q 012412 93 WQIGPQTLTELVEKMNGSDSPVDCIVYDSI-------------LLWALDVAKKFGLLGAPFLT 142 (464)
Q Consensus 93 ~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~-------------~~~~~~~A~~~giP~v~~~~ 142 (464)
-+..+... +| |+||+..- +..++.-|..+|||.|.+|.
T Consensus 78 ----------al~~~~~~-~p-DLVvSGIN~G~N~g~~v~ySGTVgAA~ea~~~GiPaiA~S~ 128 (253)
T PRK13935 78 ----------GYDVIMDK-KV-DLVISGINRGPNLGTDVLYSGTVSGALEGAMMGVPSIAISS 128 (253)
T ss_pred ----------HHHhhccC-CC-CEEEeCCccCCCCCcCCcccHhHHHHHHHHhcCCCeEEEEc
Confidence 11222221 34 99997542 23355567889999999875
|
|
| >PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria | Back alignment and domain information |
|---|
Probab=91.96 E-value=1.6 Score=37.20 Aligned_cols=93 Identities=13% Similarity=0.067 Sum_probs=51.7
Q ss_pred hCCCeEEEEeCcccccccccCCCCCCceEEEccCCCCC-CCCC-CccCHHHHHHHHHHhCcHHHHHHHHHhcCCCCCccE
Q 012412 39 HKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDE-GGYA-QAESIEAYLERFWQIGPQTLTELVEKMNGSDSPVDC 116 (464)
Q Consensus 39 ~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~p~Dl 116 (464)
++||+|+|++........ .|++...+...... .+.. -..+.+..+. ... .+...+.+|.++.-.+|+
T Consensus 1 q~gh~v~fl~~~~~~~~~------~GV~~~~y~~~~~~~~~~~~~~~~~e~~~~----rg~-av~~a~~~L~~~Gf~PDv 69 (171)
T PF12000_consen 1 QRGHEVVFLTERKRPPIP------PGVRVVRYRPPRGPTPGTHPYVRDFEAAVL----RGQ-AVARAARQLRAQGFVPDV 69 (171)
T ss_pred CCCCEEEEEecCCCCCCC------CCcEEEEeCCCCCCCCCCCcccccHHHHHH----HHH-HHHHHHHHHHHcCCCCCE
Confidence 479999999954333222 47777777532211 0111 1111221111 111 233444555544444499
Q ss_pred EEeCCchhhHHHHHHHc-CCccEEEec
Q 012412 117 IVYDSILLWALDVAKKF-GLLGAPFLT 142 (464)
Q Consensus 117 VI~D~~~~~~~~~A~~~-giP~v~~~~ 142 (464)
||+...--.++-+-+.+ ++|.+.+.-
T Consensus 70 I~~H~GWGe~Lflkdv~P~a~li~Y~E 96 (171)
T PF12000_consen 70 IIAHPGWGETLFLKDVFPDAPLIGYFE 96 (171)
T ss_pred EEEcCCcchhhhHHHhCCCCcEEEEEE
Confidence 99997766677788888 888887543
|
This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important. |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=91.90 E-value=1.4 Score=47.16 Aligned_cols=113 Identities=13% Similarity=0.057 Sum_probs=68.9
Q ss_pred EEEEeccChH---Hhhccccccceecc---CChh-HHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHH
Q 012412 336 SLVVSWCPQL---EVLAHEATGCFVTH---CGWN-STMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDA 408 (464)
Q Consensus 336 v~~~~~~p~~---~ll~~~~~~~vI~H---gG~~-s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~ 408 (464)
+.+.+++++. .++..+|+ ++.- -|+| ++.||+++|+|-...|+..+-..- ..++ .-|+.++..+.++
T Consensus 344 ~~~~~~~~~~~l~~ly~~aDv--~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~---~~~l-~~~llv~P~d~~~ 417 (726)
T PRK14501 344 HYFYRSLPFEELVALYRAADV--ALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGA---AAEL-AEALLVNPNDIEG 417 (726)
T ss_pred EEEeCCCCHHHHHHHHHhccE--EEecccccccCcccceEEEEcCCCCceEEEecccch---hHHh-CcCeEECCCCHHH
Confidence 3455788877 68889999 7743 3654 669999997752112211111111 1233 3367777778999
Q ss_pred HHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHhh
Q 012412 409 IADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLACS 460 (464)
Q Consensus 409 l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l~~~ 460 (464)
++++|.++|..+.. +-+++.+++.+.++ .-+...-++++++.+.+.
T Consensus 418 la~ai~~~l~~~~~-e~~~r~~~~~~~v~-----~~~~~~w~~~~l~~l~~~ 463 (726)
T PRK14501 418 IAAAIKRALEMPEE-EQRERMQAMQERLR-----RYDVHKWASDFLDELREA 463 (726)
T ss_pred HHHHHHHHHcCCHH-HHHHHHHHHHHHHH-----hCCHHHHHHHHHHHHHHH
Confidence 99999999986421 34444444444443 245566677777776665
|
|
| >PRK13934 stationary phase survival protein SurE; Provisional | Back alignment and domain information |
|---|
Probab=91.08 E-value=5.7 Score=36.41 Aligned_cols=111 Identities=15% Similarity=0.132 Sum_probs=63.0
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccC-CCCCCceEEEccC-CCCCCCCCCccCHHHHHHH
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRD-SSSSSIPLEAISD-GYDEGGYAQAESIEAYLER 91 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~-~~~~~~~~~~i~~-~~~~~~~~~~~~~~~~~~~ 91 (464)
||||+..--|. |---+.+|+++|...| +|+++.+...++-.-++ .....++...+.. +. . .+.-..++..-...
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~al~~~g-~V~VvAP~~eqSg~g~aiT~~~pl~~~~~~~~~~-~-~y~v~GTPaDCV~l 76 (266)
T PRK13934 1 MKILVTNDDGV-HSPGLRLLYEFVSPLG-EVDVVAPETPKSATGLGITLHKPLRMYEVDLCGF-K-VYATSGTPSDTIYL 76 (266)
T ss_pred CeEEEEcCCCC-CCHHHHHHHHHHHhCC-cEEEEccCCCCccccccccCCCCcEEEEeccCCc-c-eEEeCCCHHHHHHH
Confidence 57777666654 5567889999998887 79999988766655432 1233445544431 11 0 12222233222211
Q ss_pred HHHhCcHHHHHHHHHhcCCCCCccEEEeCC-----------ch---hhHHHHHHHcCCccEEEec
Q 012412 92 FWQIGPQTLTELVEKMNGSDSPVDCIVYDS-----------IL---LWALDVAKKFGLLGAPFLT 142 (464)
Q Consensus 92 ~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~-----------~~---~~~~~~A~~~giP~v~~~~ 142 (464)
-+..+ . .++|+||+.. ++ ..++.-|..+|||.|.+|.
T Consensus 77 -----------al~~l-~--~~pDLViSGIN~G~NlG~d~v~ySGTVgAA~Ea~~~GIPsIAvS~ 127 (266)
T PRK13934 77 -----------ATYGL-G--RKYDLVLSGINLGDNTSLQVILSSGTLGAAFQAALLGIPAVAYSA 127 (266)
T ss_pred -----------HHHhc-c--CCCCeEEecCccCCCCCcCcccccHhHHHHHHHHhcCCCEEEEec
Confidence 11222 1 3359999643 11 2345557889999999875
|
|
| >PRK00346 surE 5'(3')-nucleotidase/polyphosphatase; Provisional | Back alignment and domain information |
|---|
Probab=91.03 E-value=6.3 Score=35.90 Aligned_cols=110 Identities=14% Similarity=0.103 Sum_probs=63.6
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCC-CCCCceEEEccCCCCCCCCCCccCHHHHHHHH
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDS-SSSSIPLEAISDGYDEGGYAQAESIEAYLERF 92 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 92 (464)
||||+..--|. |---+.+|+++|.+. |+|+++.+...++-.-++. ....+++..+..+ .+....++..-.+
T Consensus 1 M~ILlTNDDGi-~a~Gi~aL~~~l~~~-~~V~VvAP~~~qSg~g~ait~~~pl~~~~~~~~----~~~v~GTPaDcV~-- 72 (250)
T PRK00346 1 MRILLTNDDGI-HAPGIRALAEALREL-ADVTVVAPDRERSGASHSLTLTRPLRVEKVDNG----FYAVDGTPTDCVH-- 72 (250)
T ss_pred CeEEEECCCCC-CChhHHHHHHHHHhC-CCEEEEeCCCCCcCCcccccCCCCeEEEEecCC----eEEECCcHHHHHH--
Confidence 57777666654 455688999999988 7999999987766555321 1233444444211 1111122221111
Q ss_pred HHhCcHHHHHHHHHhcCCCCCccEEEeCCc-------------hhhHHHHHHHcCCccEEEec
Q 012412 93 WQIGPQTLTELVEKMNGSDSPVDCIVYDSI-------------LLWALDVAKKFGLLGAPFLT 142 (464)
Q Consensus 93 ~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~-------------~~~~~~~A~~~giP~v~~~~ 142 (464)
--++.+... + +|+||+..- +..++.-|..+|||.+.+|.
T Consensus 73 ---------~gl~~l~~~-~-pDlVvSGIN~G~N~g~~v~ySGTVgAA~ea~~~GiPaiA~S~ 124 (250)
T PRK00346 73 ---------LALNGLLDP-K-PDLVVSGINHGANLGDDVLYSGTVAAAMEGALLGIPAIAVSL 124 (250)
T ss_pred ---------HHHHhhccC-C-CCEEEeCCccCCCCCCCeeccHHHHHHHHHHhcCCCeEEEec
Confidence 112223321 3 499997542 23456667889999999865
|
|
| >PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A | Back alignment and domain information |
|---|
Probab=90.91 E-value=3.8 Score=34.43 Aligned_cols=35 Identities=23% Similarity=0.225 Sum_probs=25.9
Q ss_pred CccChHHHHHHHHHHHhCCCeEEEEeCcccccccc
Q 012412 23 GQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLH 57 (464)
Q Consensus 23 ~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~ 57 (464)
..|--.-+..|+++|+++||+|++++.........
T Consensus 11 ~GG~e~~~~~l~~~l~~~G~~v~v~~~~~~~~~~~ 45 (177)
T PF13439_consen 11 IGGAERVVLNLARALAKRGHEVTVVSPGVKDPIEE 45 (177)
T ss_dssp SSHHHHHHHHHHHHHHHTT-EEEEEESS-TTS-SS
T ss_pred CChHHHHHHHHHHHHHHCCCEEEEEEcCCCccchh
Confidence 44777789999999999999999998865443333
|
|
| >cd02067 B12-binding B12 binding domain (B12-BD) | Back alignment and domain information |
|---|
Probab=90.87 E-value=1.3 Score=35.18 Aligned_cols=42 Identities=19% Similarity=0.202 Sum_probs=35.5
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCccccccc
Q 012412 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSL 56 (464)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~ 56 (464)
||++.+.++-.|.....-++..|.++|++|.++......+.+
T Consensus 1 ~vl~~~~~~e~H~lG~~~~~~~l~~~G~~V~~lg~~~~~~~l 42 (119)
T cd02067 1 KVVIATVGGDGHDIGKNIVARALRDAGFEVIDLGVDVPPEEI 42 (119)
T ss_pred CEEEEeeCCchhhHHHHHHHHHHHHCCCEEEECCCCCCHHHH
Confidence 588899999999999999999999999999998765444333
|
This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins. |
| >PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=90.56 E-value=0.43 Score=43.52 Aligned_cols=98 Identities=15% Similarity=0.163 Sum_probs=58.6
Q ss_pred CCCceEEEEecccc---cCCHHHHHHHHHHHhhCCCeEEEEEcCccc-CcCChhhhhhccCCC-cEEEEec--cCh-HHh
Q 012412 276 AKESVVYVSYGSFV---ELKAEEMEELAWGLKSSDQHFLWVVRESEQ-AKLPKKFSDETLTSH-KSLVVSW--CPQ-LEV 347 (464)
Q Consensus 276 ~~~~~v~vs~Gs~~---~~~~~~~~~~~~al~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~-nv~~~~~--~p~-~~l 347 (464)
.+++.|.+..|+.. ..+.+.+.++++.+.+.++++++..+..+. ....+.+.+. .+. .+.+.+- +.+ ..+
T Consensus 103 ~~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~e~~al 180 (247)
T PF01075_consen 103 KDKPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLLGGPEEQEKEIADQIAAG--LQNPVINLAGKTSLRELAAL 180 (247)
T ss_dssp TTSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--SSHHHHHHHHHHHHTT--HTTTTEEETTTS-HHHHHHH
T ss_pred ccCCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEccchHHHHHHHHHHHHh--cccceEeecCCCCHHHHHHH
Confidence 35678888888865 568999999999999888776665554431 1111122111 122 3344332 233 388
Q ss_pred hccccccceeccCChhHHHHHHHhCCcEecc
Q 012412 348 LAHEATGCFVTHCGWNSTMEALSLGVPMVAM 378 (464)
Q Consensus 348 l~~~~~~~vI~HgG~~s~~eal~~GvP~v~~ 378 (464)
+.++++ +|+. -.|.++=|.+.|+|+|++
T Consensus 181 i~~a~~--~I~~-Dtg~~HlA~a~~~p~v~l 208 (247)
T PF01075_consen 181 ISRADL--VIGN-DTGPMHLAAALGTPTVAL 208 (247)
T ss_dssp HHTSSE--EEEE-SSHHHHHHHHTT--EEEE
T ss_pred HhcCCE--EEec-CChHHHHHHHHhCCEEEE
Confidence 999999 9987 778999999999999986
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A. |
| >PRK02261 methylaspartate mutase subunit S; Provisional | Back alignment and domain information |
|---|
Probab=90.12 E-value=1.2 Score=36.44 Aligned_cols=60 Identities=12% Similarity=0.021 Sum_probs=45.7
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEcc
Q 012412 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAIS 71 (464)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~ 71 (464)
++.+|++.+.++-+|-.-..-++..|.++|++|+++......+.+.+.....+..++.+.
T Consensus 2 ~~~~vl~~~~~gD~H~lG~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS 61 (137)
T PRK02261 2 KKKTVVLGVIGADCHAVGNKILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVS 61 (137)
T ss_pred CCCEEEEEeCCCChhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEc
Confidence 456899999999999999999999999999999999987665555422123344444444
|
|
| >cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis | Back alignment and domain information |
|---|
Probab=90.07 E-value=0.91 Score=46.21 Aligned_cols=73 Identities=11% Similarity=0.045 Sum_probs=47.6
Q ss_pred ChHHhhccccccceec---cCCh-hHHHHHHHhCCcEeccCCcc-chhhHHHHHHhHhc--ceeecc-------CcCHHH
Q 012412 343 PQLEVLAHEATGCFVT---HCGW-NSTMEALSLGVPMVAMPQWS-DQSTNAKYILDVWK--TGLKFP-------IVKRDA 408 (464)
Q Consensus 343 p~~~ll~~~~~~~vI~---HgG~-~s~~eal~~GvP~v~~P~~~-DQ~~na~rl~~~~G--~g~~l~-------~~~~~~ 408 (464)
++.+++..|++ +|. +=|+ -++.||+++|+|+|+....+ ..... .+... + .|+.+. ..+.++
T Consensus 467 ~y~E~~~g~dl--~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~--E~v~~-~~~~gi~V~~r~~~~~~e~v~~ 541 (590)
T cd03793 467 DYEEFVRGCHL--GVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFME--EHIED-PESYGIYIVDRRFKSPDESVQQ 541 (590)
T ss_pred chHHHhhhceE--EEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhH--HHhcc-CCCceEEEecCCccchHHHHHH
Confidence 56789999999 664 4555 48899999999999876533 11111 12111 1 455553 345688
Q ss_pred HHHHHHHHhcCC
Q 012412 409 IADCISEILEGE 420 (464)
Q Consensus 409 l~~~i~~ll~~~ 420 (464)
|++++.+++..+
T Consensus 542 La~~m~~~~~~~ 553 (590)
T cd03793 542 LTQYMYEFCQLS 553 (590)
T ss_pred HHHHHHHHhCCc
Confidence 888888888654
|
GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity. |
| >COG0003 ArsA Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
Probab=89.85 E-value=2.5 Score=40.08 Aligned_cols=43 Identities=23% Similarity=0.156 Sum_probs=33.8
Q ss_pred cEEEEEc-CCCccChHHHHHHHHHHHhCCCeEEEEeCccccccc
Q 012412 14 AHCLVLT-YPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSL 56 (464)
Q Consensus 14 ~~il~~~-~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~ 56 (464)
+||+|++ -||-|-..-.-++|-.|++.|.+|.+++++......
T Consensus 2 ~riv~f~GKGGVGKTT~aaA~A~~lA~~g~kvLlvStDPAhsL~ 45 (322)
T COG0003 2 TRIVFFTGKGGVGKTTIAAATAVKLAESGKKVLLVSTDPAHSLG 45 (322)
T ss_pred cEEEEEecCCcccHHHHHHHHHHHHHHcCCcEEEEEeCCCCchH
Confidence 5777554 456699888899999999999999999887655443
|
|
| >PF02374 ArsA_ATPase: Anion-transporting ATPase; PDB: 2WOO_A 3IBG_B 3SJA_A 3H84_B 3SJD_A 3ZS9_A 3A37_A 2WOJ_A 3SJC_B 3A36_B | Back alignment and domain information |
|---|
Probab=89.76 E-value=0.36 Score=45.55 Aligned_cols=41 Identities=20% Similarity=0.146 Sum_probs=32.8
Q ss_pred cEEEE-EcCCCccChHHHHHHHHHHHhCCCeEEEEeCccccc
Q 012412 14 AHCLV-LTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYK 54 (464)
Q Consensus 14 ~~il~-~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~ 54 (464)
||++| .--||-|-..-..++|-.++++|++|.+++++....
T Consensus 1 ~r~~~~~GKGGVGKTT~aaA~A~~~A~~G~rtLlvS~Dpa~~ 42 (305)
T PF02374_consen 1 MRILFFGGKGGVGKTTVAAALALALARRGKRTLLVSTDPAHS 42 (305)
T ss_dssp -SEEEEEESTTSSHHHHHHHHHHHHHHTTS-EEEEESSTTTH
T ss_pred CeEEEEecCCCCCcHHHHHHHHHHHhhCCCCeeEeecCCCcc
Confidence 46664 556677999999999999999999999999987654
|
... |
| >COG4394 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=89.45 E-value=3.9 Score=37.33 Aligned_cols=48 Identities=25% Similarity=0.303 Sum_probs=36.8
Q ss_pred cEEEEeccChH---HhhccccccceeccCChhHHHHHHHhCCcEec--cCCccchhhHHH
Q 012412 335 KSLVVSWCPQL---EVLAHEATGCFVTHCGWNSTMEALSLGVPMVA--MPQWSDQSTNAK 389 (464)
Q Consensus 335 nv~~~~~~p~~---~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~--~P~~~DQ~~na~ 389 (464)
++...+|+||+ .||..||+ -+-. |--|+.-|..+|+|.+= .| |..|+.
T Consensus 239 rvvklPFvpqddyd~LL~lcD~--n~VR-GEDSFVRAq~agkPflWHIYp----QdentH 291 (370)
T COG4394 239 RVVKLPFVPQDDYDELLWLCDF--NLVR-GEDSFVRAQLAGKPFLWHIYP----QDENTH 291 (370)
T ss_pred EEEEecCCcHhHHHHHHHhccc--ceee-cchHHHHHHHcCCCcEEEecC----CccccH
Confidence 45556899987 88999998 4545 67799999999999973 66 555554
|
|
| >COG4370 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=89.26 E-value=2.4 Score=39.10 Aligned_cols=91 Identities=18% Similarity=0.172 Sum_probs=60.4
Q ss_pred CcEEEE-eccChHHhhccccccceeccCChhHHHHHHHhCCcEeccCCccchhh--HHHHHHhHhcceeeccCcCHHHHH
Q 012412 334 HKSLVV-SWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQST--NAKYILDVWKTGLKFPIVKRDAIA 410 (464)
Q Consensus 334 ~nv~~~-~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~--na~rl~~~~G~g~~l~~~~~~~l~ 410 (464)
+|-.+. .|-.+.++|.++++ .|--.|-- +-+++-.|||+|.+|-.+-|+. .|.|=.+++|+++.+-+-.+..-.
T Consensus 294 dnc~l~lsqqsfadiLH~ada--algmAGTA-tEQavGLGkPvi~fPg~GPQy~pgFA~rQ~rLLG~sltlv~~~aq~a~ 370 (412)
T COG4370 294 DNCSLWLSQQSFADILHAADA--ALGMAGTA-TEQAVGLGKPVIGFPGQGPQYNPGFAERQQRLLGASLTLVRPEAQAAA 370 (412)
T ss_pred CceEEEEeHHHHHHHHHHHHH--HHHhccch-HHHhhccCCceeecCCCCCCcChHHHHHHHHHhcceeeecCCchhhHH
Confidence 454443 55566677777777 66554432 2346789999999999998865 666666666888777644455555
Q ss_pred HHHHHHhcCCchHHHHHHHH
Q 012412 411 DCISEILEGERGKELRRNAG 430 (464)
Q Consensus 411 ~~i~~ll~~~~~~~~~~~a~ 430 (464)
.+..++|.|+ ++.+.++
T Consensus 371 ~~~q~ll~dp---~r~~air 387 (412)
T COG4370 371 QAVQELLGDP---QRLTAIR 387 (412)
T ss_pred HHHHHHhcCh---HHHHHHH
Confidence 5566699997 5555444
|
|
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=89.25 E-value=3.6 Score=37.67 Aligned_cols=38 Identities=18% Similarity=0.145 Sum_probs=27.4
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCccccccc
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSL 56 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~ 56 (464)
|+|+++...+. -..|++.|.++||+|+..+........
T Consensus 1 m~ILvlGGT~e-----gr~la~~L~~~g~~v~~s~~t~~~~~~ 38 (256)
T TIGR00715 1 MTVLLMGGTVD-----SRAIAKGLIAQGIEILVTVTTSEGKHL 38 (256)
T ss_pred CeEEEEechHH-----HHHHHHHHHhCCCeEEEEEccCCcccc
Confidence 46777654443 578999999999999988876654433
|
This enzyme was found to be a monomer by gel filtration. |
| >KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=88.98 E-value=21 Score=33.84 Aligned_cols=146 Identities=17% Similarity=0.266 Sum_probs=86.1
Q ss_pred CCCceEEEEecccccCCHHHHHHHHHHHhhC---------CC-eEEEEEcCcccCcCChhhhhhcc--CCCcEEEE-ecc
Q 012412 276 AKESVVYVSYGSFVELKAEEMEELAWGLKSS---------DQ-HFLWVVRESEQAKLPKKFSDETL--TSHKSLVV-SWC 342 (464)
Q Consensus 276 ~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~---------~~-~~i~~~~~~~~~~~~~~~~~~~~--~~~nv~~~-~~~ 342 (464)
+.+|.++||.-|-. +.+.+..+++|+... +. .++..+.+. .++.+.+.+..- .-.+|.+. .|.
T Consensus 252 ~~~pallvsSTswT--pDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGK--GPlkE~Y~~~I~~~~~~~v~~~tpWL 327 (444)
T KOG2941|consen 252 PERPALLVSSTSWT--PDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGK--GPLKEKYSQEIHEKNLQHVQVCTPWL 327 (444)
T ss_pred cCCCeEEEecCCCC--CcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCC--CchhHHHHHHHHHhcccceeeeeccc
Confidence 45677888754433 566777777777621 22 333333332 344554433210 22466554 786
Q ss_pred C---hHHhhccccccceeccCChh-----HHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHH
Q 012412 343 P---QLEVLAHEATGCFVTHCGWN-----STMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCIS 414 (464)
Q Consensus 343 p---~~~ll~~~~~~~vI~HgG~~-----s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~ 414 (464)
. +-.+|+.+|++...|-...| -+..-.-+|+|+..+-+.- --..|++- .-|+.. -+.++|++.+.
T Consensus 328 ~aEDYP~ll~saDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~fkc----l~ELVkh~-eNGlvF--~Ds~eLa~ql~ 400 (444)
T KOG2941|consen 328 EAEDYPKLLASADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNFKC----LDELVKHG-ENGLVF--EDSEELAEQLQ 400 (444)
T ss_pred ccccchhHhhccccceEeeecCcccCcchhHHHhhcCCCceeeecchh----HHHHHhcC-CCceEe--ccHHHHHHHHH
Confidence 4 55899999998888766655 3566677888887654321 12233344 445555 47899999999
Q ss_pred HHhcC----Cc-hHHHHHHHHHH
Q 012412 415 EILEG----ER-GKELRRNAGKW 432 (464)
Q Consensus 415 ~ll~~----~~-~~~~~~~a~~l 432 (464)
-++.| .+ -.++|+|+++-
T Consensus 401 ~lf~~fp~~a~~l~~lkkn~~e~ 423 (444)
T KOG2941|consen 401 MLFKNFPDNADELNQLKKNLREE 423 (444)
T ss_pred HHHhcCCCCHHHHHHHHHhhHHH
Confidence 99873 11 13566666554
|
|
| >COG1618 Predicted nucleotide kinase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=87.10 E-value=0.89 Score=37.89 Aligned_cols=57 Identities=18% Similarity=0.234 Sum_probs=44.3
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEccC
Q 012412 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISD 72 (464)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 72 (464)
.+|||.+.-.||-|-..-++.+++.|.++|++|-=+-++.-.+--. ..||..+.+..
T Consensus 4 ~~mki~ITG~PGvGKtTl~~ki~e~L~~~g~kvgGf~t~EVR~gGk----R~GF~Ivdl~t 60 (179)
T COG1618 4 MAMKIFITGRPGVGKTTLVLKIAEKLREKGYKVGGFITPEVREGGK----RIGFKIVDLAT 60 (179)
T ss_pred cceEEEEeCCCCccHHHHHHHHHHHHHhcCceeeeEEeeeeecCCe----EeeeEEEEccC
Confidence 3689999999999999999999999999999997555544443333 45677777653
|
|
| >TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Probab=86.96 E-value=14 Score=37.41 Aligned_cols=109 Identities=15% Similarity=0.044 Sum_probs=73.7
Q ss_pred EEEEeccChH---Hhhcccccccee---ccCChhHH-HHHHHhCC----cEeccCCccchhhHHHHHHhHhcceeeccCc
Q 012412 336 SLVVSWCPQL---EVLAHEATGCFV---THCGWNST-MEALSLGV----PMVAMPQWSDQSTNAKYILDVWKTGLKFPIV 404 (464)
Q Consensus 336 v~~~~~~p~~---~ll~~~~~~~vI---~HgG~~s~-~eal~~Gv----P~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~ 404 (464)
+.+.+.+|+. .++..+|+ ++ ..-|+|.+ .|.++++. |+|+--+.+ |. +.+ .-++.+...
T Consensus 364 ~~~~~~v~~~el~alYr~ADV--~lvT~lrDGmNLVa~Eyva~~~~~~GvLILSefaG-----aa--~~l-~~AllVNP~ 433 (487)
T TIGR02398 364 QFFTRSLPYEEVSAWFAMADV--MWITPLRDGLNLVAKEYVAAQGLLDGVLVLSEFAG-----AA--VEL-KGALLTNPY 433 (487)
T ss_pred EEEcCCCCHHHHHHHHHhCCE--EEECccccccCcchhhHHhhhcCCCCCEEEecccc-----ch--hhc-CCCEEECCC
Confidence 4666888877 57778888 55 35689866 69999988 555433221 11 444 557777788
Q ss_pred CHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHhh
Q 012412 405 KRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLACS 460 (464)
Q Consensus 405 ~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l~~~ 460 (464)
+.++++++|.++|..+.. +=+++.+++.+.++. -....=.+.+++.|...
T Consensus 434 d~~~~A~ai~~AL~m~~~-Er~~R~~~l~~~v~~-----~d~~~W~~~fl~~l~~~ 483 (487)
T TIGR02398 434 DPVRMDETIYVALAMPKA-EQQARMREMFDAVNY-----YDVQRWADEFLAAVSPQ 483 (487)
T ss_pred CHHHHHHHHHHHHcCCHH-HHHHHHHHHHHHHhh-----CCHHHHHHHHHHHhhhc
Confidence 999999999999988532 335555666665553 34455677777777654
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. |
| >PF00731 AIRC: AIR carboxylase; InterPro: IPR000031 Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE | Back alignment and domain information |
|---|
Probab=86.95 E-value=14 Score=30.62 Aligned_cols=137 Identities=18% Similarity=0.198 Sum_probs=72.3
Q ss_pred ceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChHHhhccccccceec
Q 012412 279 SVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVT 358 (464)
Q Consensus 279 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI~ 358 (464)
|.|.|-+||.. +....+++...|++++..+-+.+.+. ...++.+.+ ++...+- ..+++ ||.
T Consensus 1 p~V~Ii~gs~S--D~~~~~~a~~~L~~~gi~~~~~V~sa--HR~p~~l~~------------~~~~~~~-~~~~v--iIa 61 (150)
T PF00731_consen 1 PKVAIIMGSTS--DLPIAEEAAKTLEEFGIPYEVRVASA--HRTPERLLE------------FVKEYEA-RGADV--IIA 61 (150)
T ss_dssp -EEEEEESSGG--GHHHHHHHHHHHHHTT-EEEEEE--T--TTSHHHHHH------------HHHHTTT-TTESE--EEE
T ss_pred CeEEEEeCCHH--HHHHHHHHHHHHHHcCCCEEEEEEec--cCCHHHHHH------------HHHHhcc-CCCEE--EEE
Confidence 34677777766 67889999999999998776666553 222333221 1111110 23556 887
Q ss_pred cCChh----HHHHHHHhCCcEeccCCccchhhHHHH---HHhH-hcceeeccCc-CHHHHHHHHHHHh--cCCchHHHHH
Q 012412 359 HCGWN----STMEALSLGVPMVAMPQWSDQSTNAKY---ILDV-WKTGLKFPIV-KRDAIADCISEIL--EGERGKELRR 427 (464)
Q Consensus 359 HgG~~----s~~eal~~GvP~v~~P~~~DQ~~na~r---l~~~-~G~g~~l~~~-~~~~l~~~i~~ll--~~~~~~~~~~ 427 (464)
=.|.. ++.-++ .-+|++.+|....+.....- +.++ -|+++..-.. +...-+-.--++| .|+ ++++
T Consensus 62 ~AG~~a~Lpgvva~~-t~~PVIgvP~~~~~~~g~d~l~S~vqMp~g~pvatv~i~~~~nAA~~A~~ILa~~d~---~l~~ 137 (150)
T PF00731_consen 62 VAGMSAALPGVVASL-TTLPVIGVPVSSGYLGGLDSLLSIVQMPSGVPVATVGINNGFNAALLAARILALKDP---ELRE 137 (150)
T ss_dssp EEESS--HHHHHHHH-SSS-EEEEEE-STTTTTHHHHHHHHT--TTS--EE-SSTHHHHHHHHHHHHHHTT-H---HHHH
T ss_pred ECCCcccchhhheec-cCCCEEEeecCcccccCcccHHHHHhccCCCCceEEEccCchHHHHHHHHHHhcCCH---HHHH
Confidence 76643 444444 38999999988765543332 2222 2454333211 3333333334444 454 8888
Q ss_pred HHHHHHHHHHH
Q 012412 428 NAGKWRKLAKE 438 (464)
Q Consensus 428 ~a~~l~~~~~~ 438 (464)
+.+..++.+++
T Consensus 138 kl~~~~~~~~~ 148 (150)
T PF00731_consen 138 KLRAYREKMKE 148 (150)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHc
Confidence 88888887775
|
PurK, N5-carboxyaminoimidazole ribonucleotide (N5_CAIR) synthetase, catalyzes the conversion of 5-aminoimidazole ribonucleotide (AIR), ATP, and bicarbonate to N5-CAIR, ADP, and Pi. PurE converts N5-CAIR to CAIR, the sixth step of de novo purine biosynthesis. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. Some members of this family contain two copies of this domain []. The crystal structure of PurE indicates a unique quaternary structure that confirms the octameric nature of the enzyme [].; GO: 0004638 phosphoribosylaminoimidazole carboxylase activity, 0006189 'de novo' IMP biosynthetic process; PDB: 3TRH_O 2YWX_A 2NSL_A 1D7A_A 2NSJ_A 1QCZ_A 2ATE_A 2NSH_A 3RG8_C 3RGG_D .... |
| >PF02951 GSH-S_N: Prokaryotic glutathione synthetase, N-terminal domain; InterPro: IPR004215 Prokaryotic glutathione synthetase 6 | Back alignment and domain information |
|---|
Probab=86.57 E-value=1.3 Score=35.11 Aligned_cols=39 Identities=10% Similarity=0.050 Sum_probs=27.5
Q ss_pred cEEEEEcCCCcc---ChHHHHHHHHHHHhCCCeEEEEeCccc
Q 012412 14 AHCLVLTYPGQG---HINPLLQFSRRLQHKGIKVTLVTTRFF 52 (464)
Q Consensus 14 ~~il~~~~~~~G---H~~p~l~la~~L~~rGh~V~~~~~~~~ 52 (464)
|||+|+.-+-.+ .-.-.++|+.+-++|||+|.++.....
T Consensus 1 Mki~fvmDpi~~i~~~kDTT~alm~eAq~RGhev~~~~~~dL 42 (119)
T PF02951_consen 1 MKIAFVMDPIESIKPYKDTTFALMLEAQRRGHEVFYYEPGDL 42 (119)
T ss_dssp -EEEEEES-GGG--TTT-HHHHHHHHHHHTT-EEEEE-GGGE
T ss_pred CeEEEEeCCHHHCCCCCChHHHHHHHHHHCCCEEEEEEcCcE
Confidence 588887776544 446789999999999999999998654
|
3.2.3 from EC (glutathione synthase) catalyses the conversion of gamma-L-glutamyl-L-cysteine and glycine to orthophosphate and glutathione in the presence of ATP. This is the second step in glutathione biosynthesis. The enzyme is inhibited by 7,8-dihydrofolate, methotrexate and trimethoprim. This domain is the N terminus of the enzyme.; GO: 0004363 glutathione synthase activity, 0006750 glutathione biosynthetic process; PDB: 1GLV_A 1GSA_A 1GSH_A 2GLT_A. |
| >PRK13931 stationary phase survival protein SurE; Provisional | Back alignment and domain information |
|---|
Probab=86.52 E-value=21 Score=32.78 Aligned_cols=112 Identities=12% Similarity=0.033 Sum_probs=61.2
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhC---CCeEEEEeCcccccccccCC-CCCCceEEEccCCCCCCCCCCccCHHHHH
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHK---GIKVTLVTTRFFYKSLHRDS-SSSSIPLEAISDGYDEGGYAQAESIEAYL 89 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~r---Gh~V~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 89 (464)
||||+..--|. |---+.+|+++|.+. |++|+++.+...++-.-++. ....+++..+..+ .+.-..++..-.
T Consensus 1 M~ILlTNDDGI-~a~Gl~aL~~~l~~~~~~~~~V~VVAP~~eqSg~ghaiT~~~pl~~~~~~~~----~yav~GTPaDCV 75 (261)
T PRK13931 1 MRILITNDDGI-NAPGLEVLEQIATELAGPDGEVWTVAPAFEQSGVGHCISYTHPMMIAELGPR----RFAAEGSPADCV 75 (261)
T ss_pred CeEEEEcCCCC-CCHhHHHHHHHHHHhccCCCeEEEEeCCCCCCCCcccccCCCCeEEEEeCCC----eEEEcCchHHHH
Confidence 46666554442 344567777877663 47999999987766555331 2334555554321 112222222211
Q ss_pred HHHHHhCcHHHHHHHHHhcCCCCCccEEEeCCc----------h---hhHHHHHHHcCCccEEEec
Q 012412 90 ERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSI----------L---LWALDVAKKFGLLGAPFLT 142 (464)
Q Consensus 90 ~~~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~----------~---~~~~~~A~~~giP~v~~~~ 142 (464)
.. -+..+... .++|+||+..- + ..++.-|..+|||.+.+|.
T Consensus 76 ~l-----------al~~~~~~-~~pDlVvSGIN~G~N~g~~v~ySGTVgAA~Ea~~~GiPsiA~S~ 129 (261)
T PRK13931 76 LA-----------ALYDVMKD-APPDLVLSGVNRGNNSAENVLYSGTVGGAMEAALQGLPAIALSQ 129 (261)
T ss_pred HH-----------HHHHhcCC-CCCCEEEECCccCCCCCcCcccchhHHHHHHHHhcCCCeEEEEe
Confidence 11 11222221 23499997542 2 3355667889999999875
|
|
| >PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long) | Back alignment and domain information |
|---|
Probab=86.07 E-value=18 Score=34.41 Aligned_cols=80 Identities=11% Similarity=0.131 Sum_probs=60.5
Q ss_pred CcEEEE-eccChH---Hhhccccccceecc--CChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeecc--CcC
Q 012412 334 HKSLVV-SWCPQL---EVLAHEATGCFVTH--CGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP--IVK 405 (464)
Q Consensus 334 ~nv~~~-~~~p~~---~ll~~~~~~~vI~H--gG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~--~~~ 405 (464)
+|+.+. +++|.. .+|..||++-|+|. =|.|++.-.|..|+|+++-- +.---+-+.+. |+-+... +++
T Consensus 245 ~~~~iL~e~mpf~eYl~lL~~cDl~if~~~RQQgiGnI~lLl~~G~~v~L~~----~np~~~~l~~~-~ipVlf~~d~L~ 319 (360)
T PF07429_consen 245 ENFQILTEFMPFDEYLALLSRCDLGIFNHNRQQGIGNICLLLQLGKKVFLSR----DNPFWQDLKEQ-GIPVLFYGDELD 319 (360)
T ss_pred cceeEhhhhCCHHHHHHHHHhCCEEEEeechhhhHhHHHHHHHcCCeEEEec----CChHHHHHHhC-CCeEEeccccCC
Confidence 578654 788855 88999999655554 48999999999999998743 44444557777 7766554 899
Q ss_pred HHHHHHHHHHHhc
Q 012412 406 RDAIADCISEILE 418 (464)
Q Consensus 406 ~~~l~~~i~~ll~ 418 (464)
...++++=+.+..
T Consensus 320 ~~~v~ea~rql~~ 332 (360)
T PF07429_consen 320 EALVREAQRQLAN 332 (360)
T ss_pred HHHHHHHHHHHhh
Confidence 9999988887763
|
This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall |
| >cd01425 RPS2 Ribosomal protein S2 (RPS2), involved in formation of the translation initiation complex, where it might contact the messenger RNA and several components of the ribosome | Back alignment and domain information |
|---|
Probab=84.54 E-value=4.6 Score=35.27 Aligned_cols=118 Identities=14% Similarity=0.144 Sum_probs=62.5
Q ss_pred cChHHHHHHHHHHHhCCCeEEEEeCccccccccc-CCCCCCceEEEccCCCCCCCCCCccCHHHHHHHHHHhCcHHHHHH
Q 012412 25 GHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHR-DSSSSSIPLEAISDGYDEGGYAQAESIEAYLERFWQIGPQTLTEL 103 (464)
Q Consensus 25 GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 103 (464)
-++.....+.+.+..+|-+|.|+++......+.+ .....+-.+. ...|....+++..........+.......++..
T Consensus 40 ~~L~~A~~~i~~i~~~~g~iLfV~t~~~~~~~v~~~a~~~~~~~i--~~rw~~G~LTN~~~~~~~~~~~~~~~~~~~~k~ 117 (193)
T cd01425 40 EKLRLALNFIANIAAKGGKILFVGTKPQAQRAVKKFAERTGSFYV--NGRWLGGTLTNWKTIRKSIKRLKKLEKEKLEKN 117 (193)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCeee--cCeecCCcCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 3455566666777888999999999854443331 1111122222 222433234444444333333322211223333
Q ss_pred HHHhcCCCCCccEEEe-CCch-hhHHHHHHHcCCccEEEecch
Q 012412 104 VEKMNGSDSPVDCIVY-DSIL-LWALDVAKKFGLLGAPFLTQS 144 (464)
Q Consensus 104 ~~~l~~~~~p~DlVI~-D~~~-~~~~~~A~~~giP~v~~~~~~ 144 (464)
+..+....+.||+||. |+.. ..+..=|..+|||+|.+.-+.
T Consensus 118 ~~g~~~~~~~Pdlviv~~~~~~~~ai~Ea~~l~IP~I~i~Dtn 160 (193)
T cd01425 118 LGGIKDMFRLPDLVIVLDPRKEHQAIREASKLGIPVIAIVDTN 160 (193)
T ss_pred cccccccccCCCEEEEeCCccchHHHHHHHHcCCCEEEEecCC
Confidence 3333322344599887 5443 556777999999999986654
|
It has been shown that in Escherichia coli RPS2 is essential for the binding of ribosomal protein S1 to the 30s ribosomal subunit. In humans, most likely in all vertebrates, and perhaps in all metazoans, the protein also functions as the 67 kDa laminin receptor (LAMR1 or 67LR), which is formed from a 37 kDa precursor, and is overexpressed in many tumors. 67LR is a cell surface receptor which interacts with a variety of ligands, laminin-1 and others. It is assumed that the ligand interactions are mediated via the conserved C-terminus, which becomes extracellular as the protein undergoes conformational changes which are not well understood. Specifically, a conserved palindromic motif, LMWWML, may participate in the interactions. 67LR plays essential roles in the adhesion of cells to the basement membrane an |
| >PRK02797 4-alpha-L-fucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=84.46 E-value=15 Score=34.42 Aligned_cols=78 Identities=14% Similarity=0.180 Sum_probs=55.2
Q ss_pred CcEEEE-eccChH---Hhhccccccceecc--CChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeecc--CcC
Q 012412 334 HKSLVV-SWCPQL---EVLAHEATGCFVTH--CGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP--IVK 405 (464)
Q Consensus 334 ~nv~~~-~~~p~~---~ll~~~~~~~vI~H--gG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~--~~~ 405 (464)
+|+.+. +++|.. ++|.+||++-|+|+ =|.||++-.+..|+|+++-.. -+.+. -+.+. |+-+..+ .++
T Consensus 206 ~~~~~L~e~l~f~eYl~lL~~~Dl~~f~~~RQQgiGnl~lLi~~G~~v~l~r~---n~fwq-dl~e~-gv~Vlf~~d~L~ 280 (322)
T PRK02797 206 ENFQILTEKLPFDDYLALLRQCDLGYFIFARQQGIGTLCLLIQLGKPVVLSRD---NPFWQ-DLTEQ-GLPVLFTGDDLD 280 (322)
T ss_pred ccEEehhhhCCHHHHHHHHHhCCEEEEeechhhHHhHHHHHHHCCCcEEEecC---CchHH-HHHhC-CCeEEecCCccc
Confidence 688765 677754 89999999777765 489999999999999998431 11222 25666 7777544 777
Q ss_pred HHHHHHHHHHH
Q 012412 406 RDAIADCISEI 416 (464)
Q Consensus 406 ~~~l~~~i~~l 416 (464)
...+.++=+.+
T Consensus 281 ~~~v~e~~rql 291 (322)
T PRK02797 281 EDIVREAQRQL 291 (322)
T ss_pred HHHHHHHHHHH
Confidence 77777664443
|
|
| >COG2894 MinD Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
Probab=83.69 E-value=5.1 Score=35.35 Aligned_cols=43 Identities=26% Similarity=0.327 Sum_probs=34.7
Q ss_pred cEEEEEcCC--CccChHHHHHHHHHHHhCCCeEEEEeCccccccc
Q 012412 14 AHCLVLTYP--GQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSL 56 (464)
Q Consensus 14 ~~il~~~~~--~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~ 56 (464)
.+|+++++| |-|-..-..+|+-.|+.+|++|.++-..-....+
T Consensus 2 ~~iIVvTSGKGGVGKTTttAnig~aLA~~GkKv~liD~DiGLRNL 46 (272)
T COG2894 2 ARIIVVTSGKGGVGKTTTTANIGTALAQLGKKVVLIDFDIGLRNL 46 (272)
T ss_pred ceEEEEecCCCCcCccchhHHHHHHHHHcCCeEEEEecCcCchhh
Confidence 468877776 4599999999999999999999999877544443
|
|
| >PF02441 Flavoprotein: Flavoprotein; InterPro: IPR003382 This entry contains a diverse range of flavoprotein enzymes, including epidermin biosynthesis protein, EpiD, which has been shown to be a flavoprotein that binds FMN [] | Back alignment and domain information |
|---|
Probab=82.86 E-value=1.6 Score=35.36 Aligned_cols=43 Identities=16% Similarity=0.118 Sum_probs=34.7
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccc
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLH 57 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~ 57 (464)
+||++.-.|+.+-.. ...+.++|.++|++|.++.++...+.+.
T Consensus 1 k~i~l~vtGs~~~~~-~~~~l~~L~~~g~~v~vv~S~~A~~~~~ 43 (129)
T PF02441_consen 1 KRILLGVTGSIAAYK-APDLLRRLKRAGWEVRVVLSPSAERFVT 43 (129)
T ss_dssp -EEEEEE-SSGGGGG-HHHHHHHHHTTTSEEEEEESHHHHHHSH
T ss_pred CEEEEEEECHHHHHH-HHHHHHHHhhCCCEEEEEECCcHHHHhh
Confidence 588887777755555 9999999999999999999988777776
|
This enzyme catalyzes the removal of two reducing equivalents from the cysteine residue of the C-terminal meso-lanthionine of epidermin to form a --C==C-- double bond. This family also includes the B chain of dipicolinate synthase a small polar molecule that accumulates to high concentrations in bacterial endospores, and is thought to play a role in spore heat resistance, or the maintenance of heat resistance []. Dipicolinate synthase catalyses the formation of dipicolinic acid from dihydroxydipicolinic acid. This family also includes phenylacrylic acid decarboxylase 4.1.1 from EC [].; GO: 0003824 catalytic activity; PDB: 3QJG_L 1G63_G 1G5Q_L 1P3Y_1 1QZU_A 1E20_A 1MVN_A 1MVL_A 3ZQU_A 2EJB_A .... |
| >KOG1250 consensus Threonine/serine dehydratases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=82.55 E-value=49 Score=32.07 Aligned_cols=66 Identities=23% Similarity=0.248 Sum_probs=39.9
Q ss_pred cccceeccCChhHHHHHHHhCCcEec--cCCccch------hhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcCC
Q 012412 352 ATGCFVTHCGWNSTMEALSLGVPMVA--MPQWSDQ------STNAKYILDVWKTGLKFPIVKRDAIADCISEILEGE 420 (464)
Q Consensus 352 ~~~~vI~HgG~~s~~eal~~GvP~v~--~P~~~DQ------~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~~ 420 (464)
-+-+|-|+ |..++..|+.+|.|+-. ++...|- ..|+-++.+-.-.... -.+.+++..+|.++++|+
T Consensus 244 kIIGVEt~-~a~~f~~sl~~g~~V~lp~i~s~AdglaV~~Vg~~tf~~a~~~~d~vv--vV~~~ei~aaI~~l~ede 317 (457)
T KOG1250|consen 244 KIIGVETE-GAHSFNASLKAGKPVTLPKITSLADGLAVKTVGENTFELAQKLVDRVV--VVEDDEIAAAILRLFEDE 317 (457)
T ss_pred ceEEEeec-CcHHHHHHHhcCCeeecccccchhcccccchhhHHHHHHHHhcCceEE--EeccHHHHHHHHHHHHhh
Confidence 33446666 78899999999999753 3333332 1233332222011111 467899999999999886
|
|
| >PRK08057 cobalt-precorrin-6x reductase; Reviewed | Back alignment and domain information |
|---|
Probab=81.43 E-value=15 Score=33.42 Aligned_cols=37 Identities=16% Similarity=0.196 Sum_probs=27.1
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCccccc
Q 012412 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYK 54 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~ 54 (464)
+++|+++...+-| ..||+.|.++|++|++.+......
T Consensus 2 ~~~IlvlgGT~eg-----r~la~~L~~~g~~v~~Svat~~g~ 38 (248)
T PRK08057 2 MPRILLLGGTSEA-----RALARALAAAGVDIVLSLAGRTGG 38 (248)
T ss_pred CceEEEEechHHH-----HHHHHHHHhCCCeEEEEEccCCCC
Confidence 4578887766555 578999999999888776655443
|
|
| >cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins | Back alignment and domain information |
|---|
Probab=81.35 E-value=8.7 Score=33.78 Aligned_cols=59 Identities=12% Similarity=0.022 Sum_probs=43.5
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEcc
Q 012412 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAIS 71 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~ 71 (464)
..||++.+.++-.|-....-++..|.++|++|+++......+.+.+.....+..++.+.
T Consensus 82 ~~~vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~~~p~~~l~~~~~~~~~d~v~lS 140 (201)
T cd02070 82 KGKVVIGTVEGDIHDIGKNLVATMLEANGFEVIDLGRDVPPEEFVEAVKEHKPDILGLS 140 (201)
T ss_pred CCeEEEEecCCccchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEe
Confidence 56899999999999999999999999999999998876554444421113334444444
|
A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases. |
| >TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family | Back alignment and domain information |
|---|
Probab=80.93 E-value=6.5 Score=34.46 Aligned_cols=60 Identities=12% Similarity=-0.030 Sum_probs=46.1
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEcc
Q 012412 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAIS 71 (464)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~ 71 (464)
+..+|++.+.++-.|-....-++..|..+|++|++++.....+.+.+.....+..++.+.
T Consensus 83 ~~~~vv~~t~~gd~H~lG~~~v~~~l~~~G~~vi~LG~~vp~e~~v~~~~~~~pd~v~lS 142 (197)
T TIGR02370 83 VLGKVVCGVAEGDVHDIGKNIVVTMLRANGFDVIDLGRDVPIDTVVEKVKKEKPLMLTGS 142 (197)
T ss_pred CCCeEEEEeCCCchhHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHHHHHcCCCEEEEc
Confidence 346899999999999999999999999999999999987766655532223444444444
|
This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere. |
| >PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt | Back alignment and domain information |
|---|
Probab=80.34 E-value=7.1 Score=35.63 Aligned_cols=30 Identities=27% Similarity=0.377 Sum_probs=22.1
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTT 49 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~ 49 (464)
||||++...+-| ..|++.|.++|+ |.+-+.
T Consensus 1 m~ILvlgGTtE~-----r~la~~L~~~g~-v~~sv~ 30 (249)
T PF02571_consen 1 MKILVLGGTTEG-----RKLAERLAEAGY-VIVSVA 30 (249)
T ss_pred CEEEEEechHHH-----HHHHHHHHhcCC-EEEEEE
Confidence 588888666554 579999999999 554443
|
Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 464 | ||||
| 2pq6_A | 482 | Crystal Structure Of Medicago Truncatula Ugt85h2- I | 2e-56 | ||
| 2c1x_A | 456 | Structure And Activity Of A Flavonoid 3-O Glucosylt | 6e-45 | ||
| 2vce_A | 480 | Characterization And Engineering Of The Bifunctiona | 5e-40 | ||
| 3hbf_A | 454 | Structure Of Ugt78g1 Complexed With Myricetin And U | 2e-34 | ||
| 2acw_A | 465 | Crystal Structure Of Medicago Truncatula Ugt71g1 Co | 9e-30 | ||
| 2acv_A | 463 | Crystal Structure Of Medicago Truncatula Ugt71g1 Le | 2e-29 | ||
| 2iya_A | 424 | The Crystal Structure Of Macrolide Glycosyltransfer | 3e-09 | ||
| 2o6l_A | 170 | Crystal Structure Of The Udp-Glucuronic Acid Bindin | 2e-07 | ||
| 2iyf_A | 430 | The Crystal Structure Of Macrolide Glycosyltransfer | 4e-06 |
| >pdb|2PQ6|A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights Into The Structural Basis Of A Multifunctional (Iso) Flavonoid Glycosyltransferase Length = 482 | Back alignment and structure |
|
| >pdb|2C1X|A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification Length = 456 | Back alignment and structure |
|
| >pdb|2VCE|A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants Length = 480 | Back alignment and structure |
|
| >pdb|3HBF|A Chain A, Structure Of Ugt78g1 Complexed With Myricetin And Udp Length = 454 | Back alignment and structure |
|
| >pdb|2ACW|A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose Length = 465 | Back alignment and structure |
|
| >pdb|2ACV|A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Length = 463 | Back alignment and structure |
|
| >pdb|2IYA|A Chain A, The Crystal Structure Of Macrolide Glycosyltransferases: A Blueprint For Antibiotic Engineering Length = 424 | Back alignment and structure |
|
| >pdb|2O6L|A Chain A, Crystal Structure Of The Udp-Glucuronic Acid Binding Domain Of The Human Drug Metabolizing Udp-Glucuronosyltransferase 2b7 Length = 170 | Back alignment and structure |
|
| >pdb|2IYF|A Chain A, The Crystal Structure Of Macrolide Glycosyltransferases: A Blueprint For Antibiotic Engineering Length = 430 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10 Length = 482 | Back alignment and structure |
|---|
Score = 586 bits (1512), Expect = 0.0
Identities = 135/491 (27%), Positives = 238/491 (48%), Gaps = 38/491 (7%)
Query: 1 MENNGKKPTSCKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHR-- 58
M N + H +++ YP QGHINPL + ++ L +G +T V T + +K L +
Sbjct: 1 MGNFANRK-----PHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSR 55
Query: 59 ----DSSSSSIPLEAISDGYDEGG--YAQAESIEAYLERFWQIGPQTLTELVEKMNGSDS 112
+ E+I DG ++ + + + + EL+ ++N S +
Sbjct: 56 GPKAFDGFTDFNFESIPDGLTPMEGDGDVSQDVPTLCQSVRKNFLKPYCELLTRLNHSTN 115
Query: 113 --PVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKK--GSLELPLTGNEI 168
PV C+V D + + + A++F L + + S H + +P
Sbjct: 116 VPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVERGIIPFKDESY 175
Query: 169 L-----------LPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTF 217
L +PG+ +D+ FI + ++ + ++K +L NTF
Sbjct: 176 LTNGCLETKVDWIPGLKNFRLKDIVDFIRTTNPNDIMLEFFIE-VADRVNKDTTILLNTF 234
Query: 218 YELEEEVVEWLRKTW-SLRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRA 276
ELE +V+ L T S+ IGP QI +++K TE C+ WL +
Sbjct: 235 NELESDVINALSSTIPSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTE-CLDWLESKE 293
Query: 277 KESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRE----SEQAKLPKKFSDETLT 332
SVVYV++GS + E++ E AWGL + + FLW++R +F++E
Sbjct: 294 PGSVVYVNFGSTTVMTPEQLLEFAWGLANCKKSFLWIIRPDLVIGGSVIFSSEFTNEI-- 351
Query: 333 SHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYIL 392
+ + L+ SWCPQ +VL H + G F+THCGWNST E++ GVPM+ P ++DQ T+ ++I
Sbjct: 352 ADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQPTDCRFIC 411
Query: 393 DVWKTGLKFP-IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNID 451
+ W+ G++ VKR+ +A I+E++ G++GK++++ A + +K A+E GG S N++
Sbjct: 412 NEWEIGMEIDTNVKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLN 471
Query: 452 EFVASLACSKN 462
+ + + +N
Sbjct: 472 KVIKDVLLKQN 482
|
| >2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A* Length = 456 | Back alignment and structure |
|---|
Score = 571 bits (1474), Expect = 0.0
Identities = 133/478 (27%), Positives = 215/478 (44%), Gaps = 39/478 (8%)
Query: 1 MENNGKKPTSCKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVT--TRFFYKSLHR 58
M P H VL +P H PLL RRL T S+
Sbjct: 1 MSQTTTNP------HVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFH 54
Query: 59 D---SSSSSIPLEAISDGYDEGGYAQAESIEAYLERFWQIGPQTLTE-LVEKMNGSDSPV 114
D + +I ISDG EG Y A + +E F + P++ + +V + + PV
Sbjct: 55 DSMHTMQCNIKSYDISDGVPEG-YVFAGRPQEDIELFTRAAPESFRQGMVMAVAETGRPV 113
Query: 115 DCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNE------- 167
C+V D+ + +A D+A + G+ PF T + ++ + ++ ++G +
Sbjct: 114 SCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIGVSGIQGREDELL 173
Query: 168 ILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEW 227
+PGM + +D+ I S M+ + + + KA V N+F EL++ +
Sbjct: 174 NFIPGMSKVRFRDLQEGIVFGNLNSLFSRMLHR-MGQVLPKATAVFINSFEELDDSLTND 232
Query: 228 LRKTW-SLRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYG 286
L+ + IGP C++WL +R SVVY+S+G
Sbjct: 233 LKSKLKTYLNIGPFNLITPPPVVPNTT-------------GCLQWLKERKPTSVVYISFG 279
Query: 287 SFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLE 346
+ E+ L+ L++S F+W +R+ + LP+ F ++T +VV W PQ E
Sbjct: 280 TVTTPPPAEVVALSEALEASRVPFIWSLRDKARVHLPEGFLEKT--RGYGMVVPWAPQAE 337
Query: 347 VLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP--IV 404
VLAHEA G FVTHCGWNS E+++ GVP++ P + DQ N + + DV + G++ +
Sbjct: 338 VLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGGVF 397
Query: 405 KRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLACSKN 462
+ + C +IL E+GK+LR N R+ A AV GSS N V ++ K+
Sbjct: 398 TKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVSKPKD 455
|
| >3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} PDB: 3hbj_A* Length = 454 | Back alignment and structure |
|---|
Score = 557 bits (1438), Expect = 0.0
Identities = 112/470 (23%), Positives = 199/470 (42%), Gaps = 31/470 (6%)
Query: 1 MENNGKKPTSCKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTL---VTTRFFYKSLH 57
M + L H VL +P H PLL +++ + KVT TT
Sbjct: 1 MSTFKNEMNGNNLLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFS 60
Query: 58 RDSSS-SSIPLEAISDGYDEGGYAQAESIEAYLERFWQIGPQTLTELVEKMNGSDS-PVD 115
R + +I + DG +G Y + + + F + + ++++ +
Sbjct: 61 RSNEFLPNIKYYNVHDGLPKG-YVSSGNPREPIFLFIKAMQENFKHVIDEAVAETGKNIT 119
Query: 116 CIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHV-----KKGSLELPLTGNEILL 170
C+V D+ + D+A++ P T + + K GS E+ + +L
Sbjct: 120 CLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREKTGSKEVHDVKSIDVL 179
Query: 171 PGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRK 230
PG P L+ D+P + P M+ + +A+ V N+F + + L
Sbjct: 180 PGFPELKASDLPEGVIKDIDVPF--ATMLHKMGLELPRANAVAINSFATIHPLIENELNS 237
Query: 231 TW-SLRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFV 289
+ L +GP + K ++ C++WL+ SVVY+S+GS V
Sbjct: 238 KFKLLLNVGPFNLTTPQRKVSDEHG-------------CLEWLDQHENSSVVYISFGSVV 284
Query: 290 ELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLA 349
E+ LA L+ F+W R + KLPK F + T K +V+W PQ+E+L
Sbjct: 285 TPPPHELTALAESLEECGFPFIWSFRGDPKEKLPKGFLERT--KTKGKIVAWAPQVEILK 342
Query: 350 HEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP--IVKRD 407
H + G F+TH GWNS +E + GVPM++ P + DQ N V + G+ ++ ++
Sbjct: 343 HSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVDNGVLTKE 402
Query: 408 AIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASL 457
+I + + E+G +R+ K ++ A +AV + G+S + + +
Sbjct: 403 SIKKALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIV 452
|
| >2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A* Length = 480 | Back alignment and structure |
|---|
Score = 514 bits (1327), Expect = 0.0
Identities = 125/495 (25%), Positives = 217/495 (43%), Gaps = 58/495 (11%)
Query: 1 MENNGKKPTSCKLAHCLVLTYPGQGHINPLLQFSRRL-QHKGIKVTLVTTRFFYKSLHRD 59
ME + K P H ++ PG GH+ PL++F++RL G+ VT V S +
Sbjct: 1 MEES-KTP------HVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQR 53
Query: 60 SSSSSIPL---EAISDGYDEGGYAQAESIEAYLERFWQIGPQTLTELVEKMNGSDSPVDC 116
+ S+P D + + IE+ + L ++ +
Sbjct: 54 TVLDSLPSSISSVFLPPVDLTDLSSSTRIESRISLTVTRSNPELRKVFDSFVEGGRLPTA 113
Query: 117 IVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHV----KKGSLELPLTGNEILLPG 172
+V D A DVA +F + F + V + H+ + S E ++LPG
Sbjct: 114 LVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSCEFRELTEPLMLPG 173
Query: 173 MPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRK-- 230
P+ +D D +Y + + +A+ +L NTF+ELE ++ L++
Sbjct: 174 CVPVAGKDFLDPAQDRKD---DAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPG 230
Query: 231 --TWSLRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSF 288
+ +GP + + + ++ + C+KWL+++ SV+YVS+GS
Sbjct: 231 LDKPPVYPVGPLVNIGKQEAKQTEESE------------CLKWLDNQPLGSVLYVSFGSG 278
Query: 289 VELKAEEMEELAWGLKSSDQHFLWVVR----------------ESEQAKLPKKFSDETLT 332
L E++ ELA GL S+Q FLWV+R LP F + T
Sbjct: 279 GTLTCEQLNELALGLADSEQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERT-- 336
Query: 333 SHKSLVV-SWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYI 391
+ V+ W PQ +VLAH +TG F+THCGWNST+E++ G+P++A P +++Q NA +
Sbjct: 337 KKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLL 396
Query: 392 LDVWKTGLKFP-----IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSS 446
+ + L+ +V+R+ +A + ++EGE GK +R + ++ A + G+S
Sbjct: 397 SEDIRAALRPRAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTS 456
Query: 447 DSNIDEFVASLACSK 461
+ K
Sbjct: 457 TKALSLVALKWKAHK 471
|
| >2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A* Length = 463 | Back alignment and structure |
|---|
Score = 477 bits (1230), Expect = e-167
Identities = 107/484 (22%), Positives = 208/484 (42%), Gaps = 52/484 (10%)
Query: 1 MENNGKKPTSCKLAHCLVLTYPGQGHINPLLQFSRRL--QHKGIKVTLVTTRFFYKSLHR 58
M + K + + PG GH+ L+F++ L K + +T+ +F
Sbjct: 3 MSDINKNS------ELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFAD 56
Query: 59 D------SSSSSIPLEAISDGYDEGGYAQAESIEAYLERFWQIGPQTLTELVEKMNGSDS 112
+S I L + + + +S E Y+ F + + ++ + +
Sbjct: 57 SYIKSVLASQPQIQLIDLPEV-EPPPQELLKSPEFYILTFLESLIPHVKATIKTIL--SN 113
Query: 113 PVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLT----GNEI 168
V +V D + +DV +FG+ FLT + + +K +E +++
Sbjct: 114 KVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIEEVFDDSDRDHQL 173
Query: 169 L-LPGMPPLEP-QDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVE 226
L +PG+ P +P + Y+ E ++ NTF +LE+ ++
Sbjct: 174 LNIPGISNQVPSNVLPDACFN----KDGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSID 229
Query: 227 WLR----KTWSLRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVY 282
L K + +GP + D + + +KWL+++ +SVV+
Sbjct: 230 ALYDHDEKIPPIYAVGPLLDLKGQPNPKLDQAQH---------DLILKWLDEQPDKSVVF 280
Query: 283 VSYGSF-VELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSW 341
+ +GS V ++ E+A GLK S FLW +E+ P+ F + K ++ W
Sbjct: 281 LCFGSMGVSFGPSQIREIALGLKHSGVRFLWSNS-AEKKVFPEGFLEWMELEGKGMICGW 339
Query: 342 CPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKF 401
PQ+EVLAH+A G FV+HCGWNS +E++ GVP++ P +++Q NA ++ W GL
Sbjct: 340 APQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGL 399
Query: 402 P--------IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEF 453
+V + I + ++++ + + + +++++ AV GGSS ++ +
Sbjct: 400 RVDYRKGSDVVAAEEIEKGLKDLMDK--DSIVHKKVQEMKEMSRNAVVDGGSSLISVGKL 457
Query: 454 VASL 457
+ +
Sbjct: 458 IDDI 461
|
| >2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} Length = 424 | Back alignment and structure |
|---|
Score = 154 bits (390), Expect = 3e-42
Identities = 75/443 (16%), Positives = 139/443 (31%), Gaps = 65/443 (14%)
Query: 17 LVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDE 76
PG GH+NP L + L +G +V+ T F + + + ++ + ++I
Sbjct: 16 SFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEF-AAQVKAAGATPVVYDSILPKESN 74
Query: 77 GGYAQAESIEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLL 136
+ E E+ + F + L +L + +D D IVYD A + +K
Sbjct: 75 PEESWPEDQESAMGLFLDEAVRVLPQLEDAY--ADDRPDLIVYDIASWPAPVLGRK---W 129
Query: 137 GAPFLTQSCAVDYIYYHVKKGSLELPLTGNEILLPGMPPLEPQDMPSFIHDLGSYPAVSY 196
PF+ S + + ++P + G P + +
Sbjct: 130 DIPFVQLSPT----FVAYEGFEEDVPAVQDPTADRGEEAAAPAGTGDAEEGAEAEDGLVR 185
Query: 197 MMMKFQ------------FENIDKADWVLCNTFYELEEEVVEWLRKTWSLRTIGPTIPSF 244
+ E + + + + + + +GP ++
Sbjct: 186 FFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQIKGDTVGD---NYTFVGP---TY 239
Query: 245 YLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLK 304
W V+ ++ GS + +
Sbjct: 240 GDRSHQGT------------------WEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVD 281
Query: 305 SSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNS 364
D H + V + V W PQL++L F+TH G S
Sbjct: 282 GLDWHVVLSVGRFVDPADLGEVPPNVE------VHQWVPQLDILTK--ASAFITHAGMGS 333
Query: 365 TMEALSLGVPMVAMPQWSDQSTNAKYILDVWK---TGLKFPIVKRDAIADCISEILEGER 421
TMEALS VPMVA+PQ ++Q+ NA+ I V + V + + + + +
Sbjct: 334 TMEALSNAVPMVAVPQIAEQTMNAERI--VELGLGRHIPRDQVTAEKLREAVLAVASDPG 391
Query: 422 GKELRRNAGKWRKLAKEAVAKGG 444
+ + +E GG
Sbjct: 392 ---VAERL---AAVRQEIREAGG 408
|
| >2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} Length = 430 | Back alignment and structure |
|---|
Score = 143 bits (362), Expect = 2e-38
Identities = 80/443 (18%), Positives = 133/443 (30%), Gaps = 66/443 (14%)
Query: 9 TSCKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLE 68
T AH + + GH+NP L+ R L +G +VT F + + +
Sbjct: 3 TQTTPAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKV-AATGPRPVLYH 61
Query: 69 AISDGYDEGGYAQAESIEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALD 128
+ G D A ++ +E F Q L +L + D D +++D A
Sbjct: 62 STLPGPDADPEAWGSTLLDNVEPFLNDAIQALPQLADAYA--DDIPDLVLHDITSYPARV 119
Query: 129 VAKKFGLLGAPFLTQSCAVDYI--YYHVKKGSLELPLTGNEILLPGMPPLEPQDMPSFIH 186
+A++ G P ++ S + Y + E E ++
Sbjct: 120 LARR---WGVPAVSLSPNLVAWKGYEEEVAEPMWREPRQTERGRAYYARFEA-----WLK 171
Query: 187 DLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTWSLRTIGPTIPSFYL 246
+ G L L+ + +G
Sbjct: 172 ENGITEHPDTFA--------SHPPRSLVLIPKALQPHADRVDEDVY--TFVGACQG---- 217
Query: 247 DKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSS 306
D+ E W E VV VS GS + E +
Sbjct: 218 DRAEEGG-----------------WQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNL 260
Query: 307 DQHFLWVVRESEQAKLPKKFSDETLTSHKS--LVVSWCPQLEVLAHEATGCFVTHCGWNS 364
L + + +K + L V W PQL +L FVTH G
Sbjct: 261 PGWHLVLQ-------IGRKVTPAELGELPDNVEVHDWVPQLAILRQ--ADLFVTHAGAGG 311
Query: 365 TMEALSLGVPMVAMPQWSDQSTNAKYILDVWK---TGLKFPIVKRDAIADCISEILEGER 421
+ E L+ PM+A+PQ DQ NA + L D + + +++
Sbjct: 312 SQEGLATATPMIAVPQAVDQFGNADML--QGLGVARKLATEEATADLLRETALALVDDPE 369
Query: 422 GKELRRNAGKWRKLAKEAVAKGG 444
+ R R++ E +GG
Sbjct: 370 ---VARRL---RRIQAEMAQEGG 386
|
| >3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} Length = 402 | Back alignment and structure |
|---|
Score = 128 bits (324), Expect = 4e-33
Identities = 66/439 (15%), Positives = 136/439 (30%), Gaps = 60/439 (13%)
Query: 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAI 70
+ H L G GH+ P L L +G ++T VTT F + + + + ++
Sbjct: 2 MRQRHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLF-ADEVKAAGAEVVLYKSE 60
Query: 71 SDGYDEGGYAQAESIEAYLERFW-QIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDV 129
D + + E E L + + L E + D+P D +VYD A +
Sbjct: 61 FDTFHVPEVVKQEDAETQLHLVYVRENVAILRAAEEAL--GDNPPDLVVYDVFPFIAGRL 118
Query: 130 AKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNEILLPGMPPLEPQDMPSFIHDLG 189
P + + ++ EL + + + + + + G
Sbjct: 119 LAA--RWDRPAVRLTGGFAANEHYS--LFKELWKSNGQRHPADVEAV-HSVLVDLLGKYG 173
Query: 190 SYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTWSLRTIGPTIPSFYLDKQ 249
V + + + + +GPT+
Sbjct: 174 VDTPVKEYWD-------EIEGLTIVFLPKSFQPFAETFDE---RFAFVGPTLTG---RDG 220
Query: 250 IEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQH 309
W R V+ VS G+ E A + H
Sbjct: 221 QPG------------------WQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWH 262
Query: 310 FLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEAL 369
+ + + W P VLAH +TH + +EA
Sbjct: 263 VVMAIGGFLDPAVLGPLPPNVE------AHQWIPFHSVLAH--ARACLTHGTTGAVLEAF 314
Query: 370 SLGVPMVAMPQWS-DQSTNAKYILDVWK---TGLKFPIVKRDAIADCISEILEGERGKEL 425
+ GVP+V +P ++ + + +A+ + + + L+ ++ +I + + + +
Sbjct: 315 AAGVPLVLVPHFATEAAPSAERV--IELGLGSVLRPDQLEPASIREAVERLAADSA---V 369
Query: 426 RRNAGKWRKLAKEAVAKGG 444
R R++ ++ ++ GG
Sbjct: 370 RERV---RRMQRDILSSGG 385
|
| >3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* Length = 415 | Back alignment and structure |
|---|
Score = 121 bits (305), Expect = 2e-30
Identities = 68/440 (15%), Positives = 118/440 (26%), Gaps = 69/440 (15%)
Query: 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSS-IPLEAISD 72
AH L++ G I P L L +G +V+ VT F + ++ +
Sbjct: 21 AHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGF-----AEPVRAAGATVVPYQS 75
Query: 73 GYDEGGYAQAESIEAYLER----FWQIGPQTLTELVEKMNGSDSPVDCIVYDSI-LLWAL 127
+ A+ + R + + L E + D ++YD +
Sbjct: 76 EIIDADAAEVFGSDDLGVRPHLMYLRENVSVLRATAEAL--DGDVPDLVLYDDFPFIAGQ 133
Query: 128 DVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNEILLPGMPPLEPQDMPSFIHD 187
+A + P + S A S E + ++ ++P D+P F
Sbjct: 134 LLAAR---WRRPAVRLSAAF---------ASNEHYSFSQD-MVTLAGTIDPLDLPVFRDT 180
Query: 188 LGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTWSLRTIGPTIPSFYLD 247
L A + L + + +GP F
Sbjct: 181 LRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQIAGDTFDD---RFVFVGP---CFDDR 234
Query: 248 KQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSD 307
+ + + W VV VS G+ + + A
Sbjct: 235 RFLGE------------------WTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQP 276
Query: 308 QHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTME 367
H + + W P ++VL VTH G + ME
Sbjct: 277 WHVVMTLGGQVDPAALGDLPPNVE------AHRWVPHVKVLEQ--ATVCVTHGGMGTLME 328
Query: 368 ALSLGVPMVAMPQWSDQSTNAKYILDVWK---TGLKFPIVKRDAIADCISEILEGERGKE 424
AL G P+V +PQ D A+ + L D + + +
Sbjct: 329 ALYWGRPLVVVPQSFDVQPMARRV--DQLGLGAVLPGEKADGDTLLAAVGAVAADPA--- 383
Query: 425 LRRNAGKWRKLAKEAVAKGG 444
L + GG
Sbjct: 384 LLARV---EAMRGHVRRAGG 400
|
| >2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} Length = 384 | Back alignment and structure |
|---|
Score = 110 bits (277), Expect = 5e-27
Identities = 60/461 (13%), Positives = 111/461 (24%), Gaps = 107/461 (23%)
Query: 17 LVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTT------------RFFYKSLHRDSSSSS 64
L + + L + ++ G +V + + +
Sbjct: 4 LFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVTGVGLPAVATTDLPIRHFIT 63
Query: 65 IPLEAISDGYDEGGYAQAESIEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILL 124
E + AQA + R + + D IV ++
Sbjct: 64 TDREGRPEAIPSDPVAQARFTGRWFARMAASSLPRMLDFSR-----AWRPDLIVGGTMSY 118
Query: 125 WALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNEILLPGMPPLEPQDMPSF 184
A +A LG P + +
Sbjct: 119 VAPLLALH---LGVPHAR--------------------------QTWDAVDADGIHPGA- 148
Query: 185 IHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTWSLRTIGPTIPSF 244
+ + + E + D + L +R + +
Sbjct: 149 ------DAELRPELSELGLERLPAPDLFIDICPPSLRPANAAP---ARMMRHVATSRQCP 199
Query: 245 YLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFV-----ELKAEEMEEL 299
W+ R V V+ GS V + + + L
Sbjct: 200 LEP-----------------------WMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGL 236
Query: 300 AWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTH 359
A L D + ++ L V W P V V H
Sbjct: 237 AKDLVRWDVELIVAAPDTVAEALR--------AEVPQARVGWTPLDVVAPT--CDLLVHH 286
Query: 360 CGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWK---TGLKFPIVKRDAIADCISEI 416
G ST+ LS GVP + +P+ S A+ + L +AIAD E+
Sbjct: 287 AGGVSTLTGLSAGVPQLLIPKGSVLEAPARRV--ADYGAAIALLPGEDSTEAIADSCQEL 344
Query: 417 LEGERGKELRRNAGKWRKLAKEAVAKGGSSD--SNIDEFVA 455
+ R A + L++E + + +++
Sbjct: 345 QAKD---TYARRA---QDLSREISGMPLPATVVTALEQLAH 379
|
| >2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} Length = 441 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 6e-26
Identities = 58/462 (12%), Positives = 123/462 (26%), Gaps = 97/462 (20%)
Query: 17 LVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFF-----------------------Y 53
+ + + H+ L+ + + G +V +V +
Sbjct: 24 VFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITAAGLTAVPVGTDVDLVDFM 83
Query: 54 KSLHRDSSSSSIPLEAISDGYDEGGYAQAESIEAYLERFW--QIGPQTLTELVEKMNGSD 111
D L+ + ++ L + + P TL E +
Sbjct: 84 THAGHDIIDYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRKW 143
Query: 112 SPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNEILLP 171
P D ++++ + A A G P D +
Sbjct: 144 RP-DLVIWEPLTFAAPIAAAV---TGTPHARLLWGPD--------------------ITT 179
Query: 172 GMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKT 231
+P + P ++ W L E+ +
Sbjct: 180 RARQNFLGLLPDQPEEHREDPLAEWLT------------WTL-------EKYGGPAFDEE 220
Query: 232 WSL--RTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFV 289
+ TI P + LD ++ + + + +WL+D + V ++ G
Sbjct: 221 VVVGQWTIDPAPAAIRLDTGLKTV-GMRYVDYNGPSVV-PEWLHDEPERRRVCLTLGISS 278
Query: 290 ELKAEEMEELAW---GLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLE 346
+ + + D + + + + + V + P
Sbjct: 279 RENSIGQVSIEELLGAVGDVDAEIIATFDAQQLEGVA------NIPDN-VRTVGFVPMHA 331
Query: 347 VLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTG----LKFP 402
+L V H G S A GVP V +P D A+ + G L P
Sbjct: 332 LLPT--CAATVHHGGPGSWHTAAIHGVPQVILPDGWDTGVRAQR---TQEFGAGIALPVP 386
Query: 403 IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGG 444
+ D + + + +L+ R A ++ + +A+
Sbjct: 387 ELTPDQLRESVKRVLDDPA---HRAGA---ARMRDDMLAEPS 422
|
| >4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* Length = 398 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 1e-24
Identities = 57/449 (12%), Positives = 125/449 (27%), Gaps = 101/449 (22%)
Query: 17 LVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFF----------YKSLHRDSSSSSIP 66
LV+ +G + PL+ S L+ G +V + + + +
Sbjct: 19 LVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTGAGLPFAPTCPSLDMPEVL 78
Query: 67 LEAISDGYDEGGYAQAESIEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWA 126
+ +E + ++ + E + D ++ ++ L
Sbjct: 79 SWDREGNRTTMPREEKPLLEHIGRGYGRLVLRMRDEALALA--ERWKPDLVLTETYSLTG 136
Query: 127 LDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNEILLPGMPPLEPQDMPSFIH 186
VA LG P++ QS + I G+ L P+ +
Sbjct: 137 PLVAAT---LGIPWIEQSIR---------------LASPELIKSAGVGELAPE-----LA 173
Query: 187 DLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTWSLRTIGPTIPSFYL 246
+LG + +E + T +R + + +
Sbjct: 174 ELGLTDFPD-------------PLLSIDVCPPSMEAQPKPG---TTKMRYVPYNGRNDQV 217
Query: 247 DKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGS--------FVELKAEEMEE 298
W+ + K+ + +++G+ + ++
Sbjct: 218 P----------------------SWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQA 255
Query: 299 LAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVT 358
L+ L + V + L L P ++ V
Sbjct: 256 LSQELPKLGFEVVVAVSDKLAQTLQPLPEG-------VLAAGQFPLSAIMPACD--VVVH 306
Query: 359 HCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWK---TGLKFPIVKRDAIADCISE 415
H G +T+ LS GVP V++P ++ +A+ + + + +++ +
Sbjct: 307 HGGHGTTLTCLSEGVPQVSVPVIAEVWDSARLL--HAAGAGVEVPWEQAGVESVLAACAR 364
Query: 416 ILEGERGKELRRNAGKWRKLAKEAVAKGG 444
I + NA R+LA E
Sbjct: 365 IRDDS---SYVGNA---RRLAAEMATLPT 387
|
| >2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} Length = 170 | Back alignment and structure |
|---|
Score = 98.8 bits (247), Expect = 1e-24
Identities = 39/168 (23%), Positives = 66/168 (39%), Gaps = 15/168 (8%)
Query: 270 KWLNDRAKESVVYVSYGSFV-ELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSD 328
++ + VV S GS V + E +A L Q LW ++ L
Sbjct: 13 DFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNKPDTLGLNT-- 70
Query: 329 ETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNA 388
+ W PQ ++L H T F+TH G N EA+ G+PMV +P ++DQ N
Sbjct: 71 --------RLYKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNI 122
Query: 389 KYILDV-WKTGLKFPIVKRDAIADCISEILEGERGKELRRNAGKWRKL 435
++ + F + + + + ++ KE N K ++
Sbjct: 123 AHMKARGAAVRVDFNTMSSTDLLNALKRVINDPSYKE---NVMKLSRI 167
|
| >3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* Length = 398 | Back alignment and structure |
|---|
Score = 94.9 bits (236), Expect = 2e-21
Identities = 36/189 (19%), Positives = 66/189 (34%), Gaps = 20/189 (10%)
Query: 271 WLNDRAKESVVYVSYGSFV--ELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSD 328
L V ++ G+ +E + D F+ + + + + L
Sbjct: 225 RLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGEVDADFVLALGDLDISPLG----- 279
Query: 329 ETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNA 388
TL + V W P +L V H G + M A+ G+P + P DQ +
Sbjct: 280 -TLPRN-VRAVGWTPLHTLLRT--CTAVVHHGGGGTVMTAIDAGIPQLLAPDPRDQFQHT 335
Query: 389 KYILDVWKTGLKFPIVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDS 448
+ G+ AD + ++ E LR A R++ +E VA +++
Sbjct: 336 AREAVS-RRGIGLVSTSDKVDADLLRRLIGDE---SLRTAA---REVREEMVALPTPAET 388
Query: 449 --NIDEFVA 455
I E ++
Sbjct: 389 VRRIVERIS 397
|
| >3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* Length = 398 | Back alignment and structure |
|---|
Score = 46.4 bits (110), Expect = 1e-05
Identities = 20/146 (13%), Positives = 43/146 (29%), Gaps = 17/146 (11%)
Query: 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFF------------YKSLHRDSSS 62
L ++ PG GH+ PL+Q + + G V + +
Sbjct: 22 RVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVAEHADRAAAAGLEVVDVAPDYSAVKV 81
Query: 63 SSIPLEAISDGYDEGGYAQAESIEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSI 122
+ + A +E + + + + + D D +VY+
Sbjct: 82 FEQVAKDNPRFAETVATRPAIDLEEWGVQIAAVNRPLVDGTMA--LVDDYRPDLVVYEQG 139
Query: 123 LLWALDVAKKFGLLGAPFLTQSCAVD 148
L A + G P + ++ +
Sbjct: 140 ATVGLLAADR---AGVPAVQRNQSAW 162
|
| >3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* Length = 412 | Back alignment and structure |
|---|
Score = 92.8 bits (231), Expect = 1e-20
Identities = 44/183 (24%), Positives = 67/183 (36%), Gaps = 30/183 (16%)
Query: 271 WLNDR-AKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFL----WVVRESEQAKLPKK 325
WL+ R +VY++ G+ E + GL D L + S ++P
Sbjct: 234 WLSSRDTARPLVYLTLGTSSGGTVEVLRAAIDGLAGLDADVLVASGPSLDVSGLGEVPAN 293
Query: 326 FSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQS 385
+ SW PQ +L H V H G +T+ AL GVP ++ P D
Sbjct: 294 V----------RLESWVPQAALLPH--VDLVVHHGGSGTTLGALGAGVPQLSFPWAGDSF 341
Query: 386 TNAKYILDVWKTG----LKFPIVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVA 441
NA+ + G L + D+++ +L E R A R +A E A
Sbjct: 342 ANAQAVAQ---AGAGDHLLPDNISPDSVSGAAKRLLAEES---YRAGA---RAVAAEIAA 392
Query: 442 KGG 444
G
Sbjct: 393 MPG 395
|
| >3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* Length = 412 | Back alignment and structure |
|---|
Score = 46.2 bits (110), Expect = 1e-05
Identities = 26/145 (17%), Positives = 47/145 (32%), Gaps = 19/145 (13%)
Query: 17 LVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFF-------------YKSLHRDSSSS 63
L + GH PLL + + G +VT T F D +
Sbjct: 24 LFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLRKLGFEPVATGMPVFDGFLA 83
Query: 64 SIPLEAISDGYDEGGYAQAESIEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSIL 123
++ + +D + Q + F ++ PQ + + ++ + P D +V +
Sbjct: 84 ALRIRFDTDSPEGLTPEQLSELPQ--IVFGRVIPQRVFDELQPVIERLRP-DLVVQEISN 140
Query: 124 LWALDVAKKFGLLGAPFLTQSCAVD 148
A A K G P + D
Sbjct: 141 YGAGLAALK---AGIPTICHGVGRD 162
|
| >3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* Length = 391 | Back alignment and structure |
|---|
Score = 90.2 bits (224), Expect = 7e-20
Identities = 32/195 (16%), Positives = 57/195 (29%), Gaps = 25/195 (12%)
Query: 271 WLNDRAKESVVYVSYGSFVELKAEE---MEELAWGLKSSDQHFLWVVRESEQAKLPKKFS 327
W R V + G V + +A + + V +A L
Sbjct: 211 WGAARTSARRVCICMGRMVLNATGPAPLLRAVAAATELPGVEAVIAVPPEHRALLTDLPD 270
Query: 328 DETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTN 387
+ + + P L + G + A LG+P + +PQ+ DQ
Sbjct: 271 N-------ARIAESVPLNLFLRT--CELVICAGGSGTAFTATRLGIPQLVLPQYFDQFDY 321
Query: 388 AKYILDVWKTGLKFPI----VKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKG 443
A+ + G+ P + D I+ +L A KL+ E A
Sbjct: 322 ARNLAAA-GAGICLPDEQAQSDHEQFTDSIATVLGDT---GFAAAA---IKLSDEITAMP 374
Query: 444 GSSD--SNIDEFVAS 456
+ ++ A
Sbjct: 375 HPAALVRTLENTAAI 389
|
| >3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* Length = 391 | Back alignment and structure |
|---|
Score = 44.8 bits (106), Expect = 3e-05
Identities = 23/147 (15%), Positives = 39/147 (26%), Gaps = 20/147 (13%)
Query: 17 LVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFF-------------YKSLHRDSSSS 63
LV+ P H+ ++ LQ G +V + + R +
Sbjct: 5 LVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAHGAGLTTAGIRGNDRTGDTG 64
Query: 64 SIPLEAISDGYDEGGY--AQAESIEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDS 121
+ A + E Q L E + + P ++ D
Sbjct: 65 GTTQLRFPNPAFGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLA-EAWRP-SVLLVDV 122
Query: 122 ILLWALDVAKKFGLLGAPFLTQSCAVD 148
L + GLL P + VD
Sbjct: 123 CALIGRVLG---GLLDLPVVLHRWGVD 146
|
| >1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 Length = 415 | Back alignment and structure |
|---|
Score = 84.5 bits (209), Expect = 6e-18
Identities = 62/466 (13%), Positives = 123/466 (26%), Gaps = 82/466 (17%)
Query: 17 LVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDS-SSSSIPLEAIS---- 71
L+ T +G PL+ + R++ G V + + + +P +
Sbjct: 4 LLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDC-----AERLAEVGVPHVPVGPSAR 58
Query: 72 DGYDEGGYAQAESIEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWAL---D 128
AE + + + E +V +L A+
Sbjct: 59 APIQRAKPLTAEDVRRFTTEAIATQFDEIPAAAE-------GCAAVVTTGLLAAAIGVRS 111
Query: 129 VAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNEILLPGMPPLEPQDMPSFIHDL 188
VA+K LG P+ P P P EP
Sbjct: 112 VAEK---LGIPYFYAFHC---------------PSYVPSPYYPPPPLGEPSTQD------ 147
Query: 189 GSYPAVSYMMMKFQFENIDKADWVLCNTFY-ELEEEVVEWLRKTWSL-RTIGPTIPSFYL 246
+ + L N+ + VE + P
Sbjct: 148 TIDIPAQWERNNQSA---YQRYGGLLNSHRDAIGLPPVEDIFTFGYTDHPWVAADPVLAP 204
Query: 247 DKQIEDDK-DYGFSMFKSSTEA---CMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWG 302
+ + D G + +L+ VY+ +GS + A+ +
Sbjct: 205 LQPTDLDAVQTGAWILPDERPLSPELAAFLDAGPP--PVYLGFGS-LGAPADAVRVAIDA 261
Query: 303 LKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGW 362
+++ + + ++ + + A + H G
Sbjct: 262 IRAHGRRVILSRGWADLVLPD--------DGADCFAIGEVNHQVLFGRVA--AVIHHGGA 311
Query: 363 NSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTG----LKFPIVKRDAIADCISEILE 418
+T A G P + +PQ +DQ A V + G PI D+++ ++ L
Sbjct: 312 GTTHVAARAGAPQILLPQMADQPYYAGR---VAELGVGVAHDGPIPTFDSLSAALATALT 368
Query: 419 GERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLACSKNSA 464
E A +A G + + +++ K +
Sbjct: 369 P----ETHARA---TAVAGTIRTDGAA--VAARLLLDAVSREKPTV 405
|
| >1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 Length = 416 | Back alignment and structure |
|---|
Score = 78.3 bits (193), Expect = 6e-16
Identities = 54/455 (11%), Positives = 122/455 (26%), Gaps = 65/455 (14%)
Query: 17 LVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDS-SSSSIPLEAIS-DGY 74
L+ +G + + + RL+ G++ + + + +P + +
Sbjct: 4 LLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAA-----EERLAEVGVPHVPVGLPQH 58
Query: 75 DEGGYAQAESIEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFG 134
+R + + + V + V + + VA+K
Sbjct: 59 MMLQEGMPPPPPEEEQRLAAMTVEMQFDAVPGAAEGCAAVVAVGDLAAATGVRSVAEK-- 116
Query: 135 LLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNEILLPGMPPLEPQDMPSFIHDLGSYPAV 194
LG PF + P+ LP P + P +
Sbjct: 117 -LGLPFFYSVPS---------------PVYLASPHLP--PAYDEPTTPGVTDIRVLWEER 158
Query: 195 SYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTWSLRTIGPTIPSFYLDKQIEDDK 254
+ +++ + V + R + P + D
Sbjct: 159 AARFADRYGPTLNRRRAEI------GLPPVEDVFGYGHGERPLLAADPVLAPLQPDVDAV 212
Query: 255 DYGFSMFKSSTEA---CMKWLNDRAKESVVYVSYGSFVELKAEEM-EELAWGLKSSDQHF 310
G + +L A V++ +GS + + +++ +
Sbjct: 213 QTGAWLLSDERPLPPELEAFL--AAGSPPVHIGFGSSSGRGIADAAKVAVEAIRAQGRRV 270
Query: 311 LWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALS 370
+ +E + + A + H + A
Sbjct: 271 ILSRGWTE-------LVLPDDRDD-CFAIDEVNFQALFRRVA--AVIHHGSAGTEHVATR 320
Query: 371 LGVPMVAMPQWSDQSTNAKYILDVWKTG----LKFPIVKRDAIADCISEILEGERGKELR 426
GVP + +P+ +DQ A V G P ++++ ++ +L E R
Sbjct: 321 AGVPQLVIPRNTDQPYFAGR---VAALGIGVAHDGPTPTFESLSAALTTVLAP----ETR 373
Query: 427 RNAGKWRKLAKEAVAKGGSSDSNIDEFVASLACSK 461
A +A + G + D +A++ K
Sbjct: 374 ARA---EAVAGMVLTDGA--AAAADLVLAAVGREK 403
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 56.0 bits (134), Expect = 2e-08
Identities = 56/348 (16%), Positives = 106/348 (30%), Gaps = 86/348 (24%)
Query: 45 TLVTTRFFYKSLHRDSSSSS---IPLEAISDGYDEGGYAQAESIEAYLERFWQIGPQTLT 101
L+TTR +K + S+++ I L+ S E ++ L ++ PQ L
Sbjct: 268 ILLTTR--FKQVTDFLSAATTTHISLDHHSMTLTP-----DEV-KSLLLKYLDCRPQDLP 319
Query: 102 ELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLEL 161
V N P ++ D + HV L
Sbjct: 320 REVLTTN----PRRL-----------------SIIAESIRDGLATWDN-WKHVNCDKL-- 355
Query: 162 PLTGNEILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELE 221
I+ + LEP + L +P + +L ++++
Sbjct: 356 ----TTIIESSLNVLEPAEYRKMFDRLSVFP-----------PSAHIPTILLSLIWFDVI 400
Query: 222 EEVVEW----------LRKTWSLRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEA---- 267
+ V + K TI +IPS YL+ +++ + +Y ++ +S +
Sbjct: 401 KSDVMVVVNKLHKYSLVEKQPKESTI--SIPSIYLELKVKLENEY--ALHRSIVDHYNIP 456
Query: 268 -CMKWLNDRAKESV-----VYVSYGSFVELKAEEMEELAWGLKSSDQHFLWV---VRESE 318
+D + ++ + LK E E + F ++ +R
Sbjct: 457 KTFDS-DDLIPPYLDQYFYSHIGH----HLKNIEHPERMTLFRMVFLDFRFLEQKIRHDS 511
Query: 319 QAKLPKKFSDETLT---SHKSLVVSWCPQLEVLAHEATGCFVTHCGWN 363
A TL +K + P+ E L A F+ N
Sbjct: 512 TAWNASGSILNTLQQLKFYKPYICDNDPKYERLV-NAILDFLPKIEEN 558
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 464 | |||
| 3hbf_A | 454 | Flavonoid 3-O-glucosyltransferase; glycosyltransfe | 100.0 | |
| 2pq6_A | 482 | UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl | 100.0 | |
| 2vch_A | 480 | Hydroquinone glucosyltransferase; glycosyltransfer | 100.0 | |
| 2c1x_A | 456 | UDP-glucose flavonoid 3-O glycosyltransferase; WIN | 100.0 | |
| 2acv_A | 463 | Triterpene UDP-glucosyl transferase UGT71G1; glyco | 100.0 | |
| 2iya_A | 424 | OLEI, oleandomycin glycosyltransferase; carbohydra | 100.0 | |
| 4amg_A | 400 | Snogd; transferase, polyketide biosynthesis, GT1 f | 100.0 | |
| 1iir_A | 415 | Glycosyltransferase GTFB; rossmann fold; 1.80A {Am | 100.0 | |
| 3rsc_A | 415 | CALG2; TDP, enediyne, structural genomics, PSI-2, | 100.0 | |
| 1rrv_A | 416 | Glycosyltransferase GTFD; GT-B, glycosyltransferas | 100.0 | |
| 3ia7_A | 402 | CALG4; glycosysltransferase, calicheamicin, enediy | 100.0 | |
| 3h4t_A | 404 | Glycosyltransferase GTFA, glycosyltransferase; van | 100.0 | |
| 2yjn_A | 441 | ERYCIII, glycosyltransferase; transferase, cytochr | 100.0 | |
| 2iyf_A | 430 | OLED, oleandomycin glycosyltransferase; antibiotic | 100.0 | |
| 2p6p_A | 384 | Glycosyl transferase; X-RAY-diffraction,urdamycina | 100.0 | |
| 4fzr_A | 398 | SSFS6; structural genomics, PSI-biology, protein s | 100.0 | |
| 3oti_A | 398 | CALG3; calicheamicin, TDP, structural genomics, PS | 100.0 | |
| 3tsa_A | 391 | SPNG, NDP-rhamnosyltransferase; glycosyltransferas | 100.0 | |
| 3otg_A | 412 | CALG1; calicheamicin, TDP, structural genomics, PS | 100.0 | |
| 3s2u_A | 365 | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape | 99.98 | |
| 2o6l_A | 170 | UDP-glucuronosyltransferase 2B7; drug metabolism, | 99.95 | |
| 1f0k_A | 364 | MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe | 99.88 | |
| 3hbm_A | 282 | UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter je | 99.76 | |
| 2jzc_A | 224 | UDP-N-acetylglucosamine transferase subunit ALG13; | 99.67 | |
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 99.66 | |
| 3fro_A | 439 | GLGA glycogen synthase; glycosyltransferase family | 99.57 | |
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 99.54 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 99.54 | |
| 1v4v_A | 376 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t | 99.49 | |
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 99.47 | |
| 3ot5_A | 403 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.46 | |
| 3dzc_A | 396 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.45 | |
| 1vgv_A | 384 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.43 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 99.42 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 99.4 | |
| 3beo_A | 375 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a | 99.33 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 99.33 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 99.29 | |
| 4hwg_A | 385 | UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc | 99.16 | |
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 99.11 | |
| 1rzu_A | 485 | Glycogen synthase 1; glycosyl-transferase, GT-B fo | 99.09 | |
| 2qzs_A | 485 | Glycogen synthase; glycosyl-transferase, GT-B fold | 99.03 | |
| 2hy7_A | 406 | Glucuronosyltransferase GUMK; glycosyltransferases | 98.97 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 98.93 | |
| 2f9f_A | 177 | First mannosyl transferase (WBAZ-1); alpha-beta pr | 98.87 | |
| 2xci_A | 374 | KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci | 98.61 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 98.56 | |
| 3vue_A | 536 | GBSS-I, granule-bound starch synthase 1, chloropla | 98.35 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 98.27 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 98.24 | |
| 2bfw_A | 200 | GLGA glycogen synthase; glycosyltransferase family | 98.21 | |
| 1psw_A | 348 | ADP-heptose LPS heptosyltransferase II; structural | 98.05 | |
| 3q3e_A | 631 | HMW1C-like glycosyltransferase; N-glycosylation; 2 | 98.02 | |
| 3rhz_A | 339 | GTF3, nucleotide sugar synthetase-like protein; gl | 97.94 | |
| 3tov_A | 349 | Glycosyl transferase family 9; structural genomics | 97.93 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 97.91 | |
| 2gt1_A | 326 | Lipopolysaccharide heptosyltransferase-1; GT-B fol | 97.31 | |
| 2phj_A | 251 | 5'-nucleotidase SURE; SURE protein, putative acid | 94.83 | |
| 3ty2_A | 261 | 5'-nucleotidase SURE; surviVal protein, phosphatas | 94.66 | |
| 3t5t_A | 496 | Putative glycosyltransferase; GTB fold, pseudoglyc | 93.86 | |
| 2wqk_A | 251 | 5'-nucleotidase SURE; SURE protein, putative acid | 93.2 | |
| 2e6c_A | 244 | 5'-nucleotidase SURE; SURE protein, cowith mangane | 92.64 | |
| 2iz6_A | 176 | Molybdenum cofactor carrier protein; metal transpo | 92.54 | |
| 1j9j_A | 247 | Stationary phase surviVal protein; SURE protein, u | 92.43 | |
| 1uqt_A | 482 | Alpha, alpha-trehalose-phosphate synthase; glycosy | 92.35 | |
| 1l5x_A | 280 | SurviVal protein E; structural genomics, putative | 91.26 | |
| 3nb0_A | 725 | Glycogen [starch] synthase isoform 2; glycogen syn | 89.76 | |
| 2v4n_A | 254 | Multifunctional protein SUR E; hydrolase, surviVal | 88.5 | |
| 3l7i_A | 729 | Teichoic acid biosynthesis protein F; GT-B fold, m | 88.03 | |
| 1g5t_A | 196 | COB(I)alamin adenosyltransferase; P-loop protein, | 86.51 | |
| 2vqe_B | 256 | 30S ribosomal protein S2; tRNA-binding, rRNA-bindi | 82.61 | |
| 3igf_A | 374 | ALL4481 protein; two-domained protein consisting o | 81.43 |
| >3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-66 Score=508.62 Aligned_cols=433 Identities=24% Similarity=0.415 Sum_probs=351.6
Q ss_pred CCCCCCcEEEEEcCCCccChHHHHHHHHHHHhCC--CeEEEEeCcccccccccCC--CCCCceEEEccCCCCCCCCCCcc
Q 012412 8 PTSCKLAHCLVLTYPGQGHINPLLQFSRRLQHKG--IKVTLVTTRFFYKSLHRDS--SSSSIPLEAISDGYDEGGYAQAE 83 (464)
Q Consensus 8 ~~~~~~~~il~~~~~~~GH~~p~l~la~~L~~rG--h~V~~~~~~~~~~~~~~~~--~~~~~~~~~i~~~~~~~~~~~~~ 83 (464)
|...++.||+++|++++||++|++.||+.|+.+| +.|||++++.+...+.+.. ...+++|..+|+++++ +.+...
T Consensus 8 M~~~~~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~~~~~~~i~~~~ipdglp~-~~~~~~ 86 (454)
T 3hbf_A 8 MNGNNLLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSNEFLPNIKYYNVHDGLPK-GYVSSG 86 (454)
T ss_dssp ----CCCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSSSCCCTTEEEEECCCCCCT-TCCCCS
T ss_pred ccCCCCCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhcccccCCCCceEEecCCCCCC-CccccC
Confidence 4556678999999999999999999999999999 9999999986666554221 1357999999988877 444433
Q ss_pred CHHHHHHHHHHhCcHHHHHHHHHhcC-CCCCccEEEeCCchhhHHHHHHHcCCccEEEecchHHHHHHHhhhhc--Ccc-
Q 012412 84 SIEAYLERFWQIGPQTLTELVEKMNG-SDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKK--GSL- 159 (464)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~~~~~l~~-~~~p~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~--~~~- 159 (464)
+....+..+.......+++.++++.+ ...|+||||+|.++.|+..+|+++|||++.|++++++.+..+.+... ...
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~~~~ 166 (454)
T 3hbf_A 87 NPREPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREKTG 166 (454)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHHHTCC
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHHhhcC
Confidence 33344444444445556666665432 12457999999999999999999999999999999998877766421 111
Q ss_pred --cCCCCCCceeCCCCCCCCCCCCCCccccCCCCchHHHHHHHHHhhhccCCcEEEecchhhhhHHHHHHHHhcC-Ceee
Q 012412 160 --ELPLTGNEILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTW-SLRT 236 (464)
Q Consensus 160 --~~p~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~-~~~~ 236 (464)
....+.....+||+|.+...+++.+... .....+.+.+. +......+++.+++||+++||++..+.+.... ++++
T Consensus 167 ~~~~~~~~~~~~iPg~p~~~~~dlp~~~~~-~~~~~~~~~~~-~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~~~~~v~~ 244 (454)
T 3hbf_A 167 SKEVHDVKSIDVLPGFPELKASDLPEGVIK-DIDVPFATMLH-KMGLELPRANAVAINSFATIHPLIENELNSKFKLLLN 244 (454)
T ss_dssp HHHHTTSSCBCCSTTSCCBCGGGSCTTSSS-CTTSHHHHHHH-HHHHHGGGSSCEEESSCGGGCHHHHHHHHTTSSCEEE
T ss_pred CCccccccccccCCCCCCcChhhCchhhcc-CCchHHHHHHH-HHHHhhccCCEEEECChhHhCHHHHHHHHhcCCCEEE
Confidence 1111122234899999888888877643 33344666666 77777888999999999999998888877654 5999
Q ss_pred ecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEEcC
Q 012412 237 IGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRE 316 (464)
Q Consensus 237 vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~ 316 (464)
|||+.+.... + ..+++.++.+||+.++++++|||+|||....+.+++.+++.+|++.+++|+|+++.
T Consensus 245 vGPl~~~~~~----~---------~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~~~ 311 (454)
T 3hbf_A 245 VGPFNLTTPQ----R---------KVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFRG 311 (454)
T ss_dssp CCCHHHHSCC----S---------CCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEECCS
T ss_pred ECCccccccc----c---------cccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 9999754110 0 01124678999998888999999999999888999999999999999999999988
Q ss_pred cccCcCChhhhhhccCCCcEEEEeccChHHhhccccccceeccCChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhc
Q 012412 317 SEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWK 396 (464)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G 396 (464)
.....+++++.++ .++|+++++|+||.++|+|+++++||||||+||++||+++|||||++|++.||+.||+++++.||
T Consensus 312 ~~~~~lp~~~~~~--~~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g 389 (454)
T 3hbf_A 312 DPKEKLPKGFLER--TKTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLE 389 (454)
T ss_dssp CHHHHSCTTHHHH--TTTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSC
T ss_pred cchhcCCHhHHhh--cCCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhC
Confidence 7656788888777 78999999999999999999988899999999999999999999999999999999999999449
Q ss_pred ceeecc--CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 012412 397 TGLKFP--IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLA 458 (464)
Q Consensus 397 ~g~~l~--~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l~ 458 (464)
+|+.+. .++.++|.++|+++|.++++++||+||+++++++++++.+|||+.+.+++|+++|.
T Consensus 390 ~Gv~l~~~~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~i~ 453 (454)
T 3hbf_A 390 IGVGVDNGVLTKESIKKALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVT 453 (454)
T ss_dssp SEEECGGGSCCHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHT
T ss_pred eeEEecCCCCCHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHh
Confidence 999998 79999999999999998767799999999999999999999999999999999884
|
| >2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10 | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-60 Score=480.56 Aligned_cols=446 Identities=29% Similarity=0.561 Sum_probs=333.3
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCC------CCCceEEEccCCCCCCC--CCCc
Q 012412 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSS------SSSIPLEAISDGYDEGG--YAQA 82 (464)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~------~~~~~~~~i~~~~~~~~--~~~~ 82 (464)
++++||+++|+++.||++|++.||++|++|||+|||++++.+.+.+.+... ..+++|++++++++... ....
T Consensus 6 ~~~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~lp~~~~~~~~~ 85 (482)
T 2pq6_A 6 NRKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIPDGLTPMEGDGDVS 85 (482)
T ss_dssp --CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEECCCCC---------
T ss_pred CCCCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCCceEEEECCCCCCCcccccCcc
Confidence 446799999999999999999999999999999999999887665542110 13899999997665511 1222
Q ss_pred cCHHHHHHHHHHhCcHHHHHHHHHhcCC--CCCccEEEeCCchhhHHHHHHHcCCccEEEecchHHHHHHHhhhh----c
Q 012412 83 ESIEAYLERFWQIGPQTLTELVEKMNGS--DSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVK----K 156 (464)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~~~~~l~~~--~~p~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~----~ 156 (464)
.....++..+...+...++++++.+..+ ..++||||+|.++.|+..+|+++|||++.+++++++....+.++. .
T Consensus 86 ~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~ 165 (482)
T 2pq6_A 86 QDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVER 165 (482)
T ss_dssp CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHHHHHT
T ss_pred hhHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHHHHHHHhc
Confidence 3455556655566777888888887642 245699999999999999999999999999999877665543221 1
Q ss_pred CcccCCCC--------CCce-eCCCCCCCCCCCCCCccccCCCCchHHHHHHHHHhhhccCCcEEEecchhhhhHHHHHH
Q 012412 157 GSLELPLT--------GNEI-LLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEW 227 (464)
Q Consensus 157 ~~~~~p~~--------~~~~-~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~ 227 (464)
+..|.+.. +... .+|+++.+...+++.+.........+.+.+. .......+++.+++||+++||++..+.
T Consensus 166 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~vl~nt~~~le~~~~~~ 244 (482)
T 2pq6_A 166 GIIPFKDESYLTNGCLETKVDWIPGLKNFRLKDIVDFIRTTNPNDIMLEFFI-EVADRVNKDTTILLNTFNELESDVINA 244 (482)
T ss_dssp TCSSCSSGGGGTSSGGGCBCCSSTTCCSCBGGGSCGGGCCSCTTCHHHHHHH-HHHHTCCTTCCEEESSCGGGGHHHHHH
T ss_pred CCCCCccccccccccccCccccCCCCCCCchHHCchhhccCCcccHHHHHHH-HHHHhhccCCEEEEcChHHHhHHHHHH
Confidence 22222110 0111 3466665555555544432222233444444 555666788999999999999987777
Q ss_pred HHhc-CCeeeecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhC
Q 012412 228 LRKT-WSLRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSS 306 (464)
Q Consensus 228 ~~~~-~~~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~ 306 (464)
+++. +++++|||+.+..............+.++|. .+.++.+|++.++++++|||++||....+.+.+..++.+|++.
T Consensus 245 ~~~~~~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~ 323 (482)
T 2pq6_A 245 LSSTIPSIYPIGPLPSLLKQTPQIHQLDSLDSNLWK-EDTECLDWLESKEPGSVVYVNFGSTTVMTPEQLLEFAWGLANC 323 (482)
T ss_dssp HHTTCTTEEECCCHHHHHHTSTTGGGGCC----------CHHHHHHTTSCTTCEEEEECCSSSCCCHHHHHHHHHHHHHT
T ss_pred HHHhCCcEEEEcCCcccccccccccccccccccccc-cchHHHHHHhcCCCCceEEEecCCcccCCHHHHHHHHHHHHhc
Confidence 7654 3699999996520000000000000112222 2356889999877889999999999877888899999999999
Q ss_pred CCeEEEEEcCcc----cCcCChhhhhhccCCCcEEEEeccChHHhhccccccceeccCChhHHHHHHHhCCcEeccCCcc
Q 012412 307 DQHFLWVVRESE----QAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWS 382 (464)
Q Consensus 307 ~~~~i~~~~~~~----~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~ 382 (464)
+++|+|+++... ...+++++.++ .++|+++++|+||.++|+|+++++||||||+||++||+++|||+|++|++.
T Consensus 324 ~~~~l~~~~~~~~~~~~~~l~~~~~~~--~~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~Eal~~GvP~i~~P~~~ 401 (482)
T 2pq6_A 324 KKSFLWIIRPDLVIGGSVIFSSEFTNE--IADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFA 401 (482)
T ss_dssp TCEEEEECCGGGSTTTGGGSCHHHHHH--HTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCST
T ss_pred CCcEEEEEcCCccccccccCcHhHHHh--cCCCEEEEeecCHHHHhcCCCCCEEEecCCcchHHHHHHcCCCEEecCccc
Confidence 999999997642 12367777766 679999999999999999999999999999999999999999999999999
Q ss_pred chhhHHHHHH-hHhcceeecc-CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHhh
Q 012412 383 DQSTNAKYIL-DVWKTGLKFP-IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLACS 460 (464)
Q Consensus 383 DQ~~na~rl~-~~~G~g~~l~-~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l~~~ 460 (464)
||+.||++++ +. |+|+.+. +++.++|.++|+++|.|+++++||+||+++++.+++++.+||++...+++|+++|...
T Consensus 402 dQ~~na~~~~~~~-G~g~~l~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~~~~ 480 (482)
T 2pq6_A 402 DQPTDCRFICNEW-EIGMEIDTNVKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKVIKDVLLK 480 (482)
T ss_dssp THHHHHHHHHHTS-CCEEECCSSCCHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHTTCC
T ss_pred chHHHHHHHHHHh-CEEEEECCCCCHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHhc
Confidence 9999999997 68 9999998 8999999999999999875667999999999999999999999999999999998654
Q ss_pred c
Q 012412 461 K 461 (464)
Q Consensus 461 ~ 461 (464)
+
T Consensus 481 ~ 481 (482)
T 2pq6_A 481 Q 481 (482)
T ss_dssp -
T ss_pred C
Confidence 3
|
| >2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-58 Score=462.60 Aligned_cols=430 Identities=29% Similarity=0.489 Sum_probs=320.8
Q ss_pred CCCCcEEEEEcCCCccChHHHHHHHHHHHhC-CCeEEEEeCccc--ccccccC-CC-CCCceEEEccCCCCCCCCCCccC
Q 012412 10 SCKLAHCLVLTYPGQGHINPLLQFSRRLQHK-GIKVTLVTTRFF--YKSLHRD-SS-SSSIPLEAISDGYDEGGYAQAES 84 (464)
Q Consensus 10 ~~~~~~il~~~~~~~GH~~p~l~la~~L~~r-Gh~V~~~~~~~~--~~~~~~~-~~-~~~~~~~~i~~~~~~~~~~~~~~ 84 (464)
.++++||+++|+++.||++|+++||++|++| ||+|||++++.. ...+... .. ..++.|++++..... ......+
T Consensus 3 ~~~~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~-~~~~~~~ 81 (480)
T 2vch_A 3 ESKTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLDSLPSSISSVFLPPVDLT-DLSSSTR 81 (480)
T ss_dssp ---CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC-CCTTEEEEECCCCCCT-TSCTTCC
T ss_pred CCCCcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhccccCCCceEEEcCCCCCC-CCCCchh
Confidence 3455799999999999999999999999998 999999999873 3333310 01 258999999864322 1111223
Q ss_pred HHHHHHHHHHhCcHHHHHHHHHhcCCCCCc-cEEEeCCchhhHHHHHHHcCCccEEEecchHHHHHHHhhhh--c--Ccc
Q 012412 85 IEAYLERFWQIGPQTLTELVEKMNGSDSPV-DCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVK--K--GSL 159 (464)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~~~~~l~~~~~p~-DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~--~--~~~ 159 (464)
....+..........++++++.+.. ..++ ||||+|.++.|+..+|+++|||++.+++++++....+.++. . ...
T Consensus 82 ~~~~~~~~~~~~~~~l~~ll~~~~~-~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (480)
T 2vch_A 82 IESRISLTVTRSNPELRKVFDSFVE-GGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSC 160 (480)
T ss_dssp HHHHHHHHHHTTHHHHHHHHHHHHH-TTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHHHCCS
T ss_pred HHHHHHHHHHhhhHHHHHHHHHhcc-CCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHHHhcCCC
Confidence 3333334444556677777777632 2457 99999999989999999999999999999887665554332 1 111
Q ss_pred cCCCCCCceeCCCCCCCCCCCCCCccccCCCCchHHHHHHHHHhhhccCCcEEEecchhhhhHHHHHHHHh----cCCee
Q 012412 160 ELPLTGNEILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRK----TWSLR 235 (464)
Q Consensus 160 ~~p~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~----~~~~~ 235 (464)
++.+...+..+|+++++...+++..... + .......+. +......+..++++|++.+++......+.+ .++++
T Consensus 161 ~~~~~~~~~~~Pg~~p~~~~~l~~~~~~-~-~~~~~~~~~-~~~~~~~~~~g~~~nt~~ele~~~~~~l~~~~~~~~~v~ 237 (480)
T 2vch_A 161 EFRELTEPLMLPGCVPVAGKDFLDPAQD-R-KDDAYKWLL-HNTKRYKEAEGILVNTFFELEPNAIKALQEPGLDKPPVY 237 (480)
T ss_dssp CGGGCSSCBCCTTCCCBCGGGSCGGGSC-T-TSHHHHHHH-HHHHHGGGCSEEEESCCTTTSHHHHHHHHSCCTTCCCEE
T ss_pred cccccCCcccCCCCCCCChHHCchhhhc-C-CchHHHHHH-HHHHhcccCCEEEEcCHHHHhHHHHHHHHhcccCCCcEE
Confidence 1111012335677776665555544321 1 112334444 555566777889999999999877777653 24699
Q ss_pred eecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEEc
Q 012412 236 TIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVR 315 (464)
Q Consensus 236 ~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~ 315 (464)
+|||+..... +.. . .+.+.++.+||+.++++++|||||||+...+.+.+.+++.+|++++++|+|+++
T Consensus 238 ~vGpl~~~~~-----~~~------~-~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~ 305 (480)
T 2vch_A 238 PVGPLVNIGK-----QEA------K-QTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIR 305 (480)
T ss_dssp ECCCCCCCSC-----SCC------------CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred EEeccccccc-----ccc------C-ccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCCcEEEEEC
Confidence 9999976511 000 0 123467899999877889999999999888899999999999999999999997
Q ss_pred Cccc----------------CcCChhhhhhccCCCcEEEEe-ccChHHhhccccccceeccCChhHHHHHHHhCCcEecc
Q 012412 316 ESEQ----------------AKLPKKFSDETLTSHKSLVVS-WCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAM 378 (464)
Q Consensus 316 ~~~~----------------~~~~~~~~~~~~~~~nv~~~~-~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~ 378 (464)
.... ..+|+++.++ ..++..++. |+||.++|+|+++++||||||+||++||+++|||||++
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~--~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~ 383 (480)
T 2vch_A 306 SPSGIANSSYFDSHSQTDPLTFLPPGFLER--TKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAW 383 (480)
T ss_dssp CCCSSTTTTTTCC--CSCGGGGSCTTHHHH--TTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEEC
T ss_pred CccccccccccccccccchhhhcCHHHHHH--hCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCEEec
Confidence 6421 2355666555 344456665 99999999999988899999999999999999999999
Q ss_pred CCccchhhHHHHH-HhHhcceeecc-----CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHH
Q 012412 379 PQWSDQSTNAKYI-LDVWKTGLKFP-----IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDE 452 (464)
Q Consensus 379 P~~~DQ~~na~rl-~~~~G~g~~l~-----~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~ 452 (464)
|++.||+.||+++ ++. |+|+.+. .++.++|.++|+++|.++++++||+||+++++++++++.+||++...+++
T Consensus 384 P~~~DQ~~na~~l~~~~-G~g~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~~~~ 462 (480)
T 2vch_A 384 PLYAEQKMNAVLLSEDI-RAALRPRAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSL 462 (480)
T ss_dssp CCSTTHHHHHHHHHHTT-CCEECCCCCTTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHH
T ss_pred cccccchHHHHHHHHHh-CeEEEeecccCCccCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHH
Confidence 9999999999997 688 9999997 38999999999999986555699999999999999999999999999999
Q ss_pred HHHHHHh
Q 012412 453 FVASLAC 459 (464)
Q Consensus 453 ~~~~l~~ 459 (464)
+++++..
T Consensus 463 ~v~~~~~ 469 (480)
T 2vch_A 463 VALKWKA 469 (480)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999864
|
| >2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-59 Score=466.32 Aligned_cols=435 Identities=30% Similarity=0.473 Sum_probs=325.1
Q ss_pred CCCCcEEEEEcCCCccChHHHHHHHHHHHhCCC--eEEEEeCcccccccccCCC---CCCceEEEccCCCCCCCCCCccC
Q 012412 10 SCKLAHCLVLTYPGQGHINPLLQFSRRLQHKGI--KVTLVTTRFFYKSLHRDSS---SSSIPLEAISDGYDEGGYAQAES 84 (464)
Q Consensus 10 ~~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh--~V~~~~~~~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~~~~~~ 84 (464)
..+++||+++|+++.||++|++.||+.|++||| .|||++++...+.+.+... ..++.+++++++++. ..+....
T Consensus 4 ~~~~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~~~~~~~i~~~~i~~glp~-~~~~~~~ 82 (456)
T 2c1x_A 4 TTTNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMHTMQCNIKSYDISDGVPE-GYVFAGR 82 (456)
T ss_dssp ---CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC-------CTTEEEEECCCCCCT-TCCCCCC
T ss_pred CCCCCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhccccccCCCceEEEeCCCCCCC-cccccCC
Confidence 344679999999999999999999999999975 5688888755444332111 257999999887765 3221122
Q ss_pred HHHHHHHHHHhCcHHHHHHHHHhcCC-CCCccEEEeCCchhhHHHHHHHcCCccEEEecchHHHHHHHhhhh--c---Cc
Q 012412 85 IEAYLERFWQIGPQTLTELVEKMNGS-DSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVK--K---GS 158 (464)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~~~~~l~~~-~~p~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~--~---~~ 158 (464)
....+..+.......++++++++.++ ..++||||+|.++.|+..+|+++|||++.+++++++....+.+.. . +.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (456)
T 2c1x_A 83 PQEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIGV 162 (456)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHHHHHCS
T ss_pred hHHHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHHHHhccCC
Confidence 23333334443344455555544321 145699999999999999999999999999999876655433211 1 11
Q ss_pred ccC-CC-CCCceeCCCCCCCCCCCCCCccccCCCCchHHHHHHHHHhhhccCCcEEEecchhhhhHHHHHHHHhcC-Cee
Q 012412 159 LEL-PL-TGNEILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTW-SLR 235 (464)
Q Consensus 159 ~~~-p~-~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~-~~~ 235 (464)
.+. .. .....++|+++.++..+++...........+...+. +......+++.+++||+++|+++..+.+++.. +++
T Consensus 163 ~~~~~~~~~~~~~~pg~~~~~~~~lp~~~~~~~~~~~~~~~~~-~~~~~~~~~~~vl~ns~~~le~~~~~~~~~~~~~~~ 241 (456)
T 2c1x_A 163 SGIQGREDELLNFIPGMSKVRFRDLQEGIVFGNLNSLFSRMLH-RMGQVLPKATAVFINSFEELDDSLTNDLKSKLKTYL 241 (456)
T ss_dssp SCCTTCTTCBCTTSTTCTTCBGGGSCTTTSSSCTTSHHHHHHH-HHHHHGGGSSCEEESSCGGGCHHHHHHHHHHSSCEE
T ss_pred cccccccccccccCCCCCcccHHhCchhhcCCCcccHHHHHHH-HHHHhhhhCCEEEECChHHHhHHHHHHHHhcCCCEE
Confidence 100 11 111224788876666665543321111222334444 44455577889999999999998777666544 599
Q ss_pred eecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEEc
Q 012412 236 TIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVR 315 (464)
Q Consensus 236 ~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~ 315 (464)
+|||+..... .. . .+.+.++.+|++.++++++|||++||....+.+.+..++.++++.+.+|+|+++
T Consensus 242 ~vGpl~~~~~------~~-~------~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~ 308 (456)
T 2c1x_A 242 NIGPFNLITP------PP-V------VPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSLR 308 (456)
T ss_dssp ECCCHHHHC----------------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEEECC
T ss_pred EecCcccCcc------cc-c------ccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcCCeEEEEEC
Confidence 9999965411 00 0 011345889999877889999999999877889999999999999999999998
Q ss_pred CcccCcCChhhhhhccCCCcEEEEeccChHHhhccccccceeccCChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHh
Q 012412 316 ESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVW 395 (464)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~ 395 (464)
......+++++.++ .++|+++++|+||.++|+|+++++||||||+||++||+++|||+|++|++.||+.||+++++.|
T Consensus 309 ~~~~~~l~~~~~~~--~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~ 386 (456)
T 2c1x_A 309 DKARVHLPEGFLEK--TRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVL 386 (456)
T ss_dssp GGGGGGSCTTHHHH--HTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTS
T ss_pred CcchhhCCHHHHhh--cCCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChhhHHHHHHHHHHHh
Confidence 76555677777666 6789999999999999998888889999999999999999999999999999999999999988
Q ss_pred cceeecc--CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHhhc
Q 012412 396 KTGLKFP--IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLACSK 461 (464)
Q Consensus 396 G~g~~l~--~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l~~~~ 461 (464)
|+|+.+. .++.++|.++|+++|.|+++++||+||+++++.+++++.+|||+...+++|++++...|
T Consensus 387 g~g~~l~~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~~~~~~ 454 (456)
T 2c1x_A 387 EIGVRIEGGVFTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVSKPK 454 (456)
T ss_dssp CCEEECGGGSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHTSCC
T ss_pred CeEEEecCCCcCHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHHhcC
Confidence 9999997 79999999999999998767789999999999999999999999999999999986543
|
| >2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-56 Score=447.88 Aligned_cols=424 Identities=23% Similarity=0.421 Sum_probs=322.8
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhC--CCeEEEEeCccccc-----cccc-CCCCCCceEEEccCCCCCCCCCCcc
Q 012412 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHK--GIKVTLVTTRFFYK-----SLHR-DSSSSSIPLEAISDGYDEGGYAQAE 83 (464)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~r--Gh~V~~~~~~~~~~-----~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~ 83 (464)
+++||+++|+++.||++|++.||+.|++| ||+|||++++.+.+ .+.. .....++.|+++|++... ..+...
T Consensus 8 ~~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~-~~~~~~ 86 (463)
T 2acv_A 8 KNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQPQIQLIDLPEVEPP-PQELLK 86 (463)
T ss_dssp HCEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHHCSCTTEEEEECCCCCCC-CGGGGG
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhcccCCCCceEEECCCCCCC-cccccC
Confidence 46799999999999999999999999999 99999999987532 1110 012358999999975322 111112
Q ss_pred CHHHHHHHHHHhCcHHHHHHHHHhcCCCCCccEEEeCCchhhHHHHHHHcCCccEEEecchHHHHHHHhhhhcCcc--cC
Q 012412 84 SIEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSL--EL 161 (464)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~--~~ 161 (464)
.....+..........++++++++ . ..++||||+|.++.|+..+|+++|||++++++++++....+.++..... ++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~ll~~~-~-~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (463)
T 2acv_A 87 SPEFYILTFLESLIPHVKATIKTI-L-SNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIEEVF 164 (463)
T ss_dssp SHHHHHHHHHHHTHHHHHHHHHHH-C-CTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSCTTCCC
T ss_pred CccHHHHHHHHhhhHHHHHHHHhc-c-CCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhhcccCCC
Confidence 221113333345556777888776 2 2456999999999999999999999999999998877665544422111 11
Q ss_pred CCCCC---ceeCCCC-CCCCCCCCCCccccCCCCchHHHHHHHHHhhhccCCcEEEecchhhhhHHHHHHHHh----cCC
Q 012412 162 PLTGN---EILLPGM-PPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRK----TWS 233 (464)
Q Consensus 162 p~~~~---~~~~p~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~----~~~ 233 (464)
...+. ...+|++ +++...+++...... ......+. +......+++.+++||++++++.....+.+ .++
T Consensus 165 ~~~~~~~~~~~~pg~~~~~~~~~l~~~~~~~---~~~~~~~~-~~~~~~~~~~~~l~nt~~ele~~~~~~l~~~~~p~~~ 240 (463)
T 2acv_A 165 DDSDRDHQLLNIPGISNQVPSNVLPDACFNK---DGGYIAYY-KLAERFRDTKGIIVNTFSDLEQSSIDALYDHDEKIPP 240 (463)
T ss_dssp CCSSGGGCEECCTTCSSCEEGGGSCHHHHCT---TTHHHHHH-HHHHHHTTSSEEEESCCHHHHHHHHHHHHHHCTTSCC
T ss_pred CCccccCceeECCCCCCCCChHHCchhhcCC---chHHHHHH-HHHHhcccCCEEEECCHHHHhHHHHHHHHhccccCCc
Confidence 11122 4457887 666655555333211 11344444 555566778899999999999988777765 346
Q ss_pred eeeecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccc-cCCHHHHHHHHHHHhhCCCeEEE
Q 012412 234 LRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFV-ELKAEEMEELAWGLKSSDQHFLW 312 (464)
Q Consensus 234 ~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~-~~~~~~~~~~~~al~~~~~~~i~ 312 (464)
+++|||+.+.... +.... . .+.+.++.+|++.++++++|||++||.. ..+.+.+..++.+|++.+++|+|
T Consensus 241 v~~vGpl~~~~~~----~~~~~---~--~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l~ 311 (463)
T 2acv_A 241 IYAVGPLLDLKGQ----PNPKL---D--QAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLW 311 (463)
T ss_dssp EEECCCCCCSSCC----CBTTB---C--HHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred EEEeCCCcccccc----ccccc---c--cccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCCCcEEE
Confidence 9999999765110 00000 0 1234678999998778899999999998 78889999999999999999999
Q ss_pred EEcCcccCcCChhhhhhccC--CCcEEEEeccChHHhhccccccceeccCChhHHHHHHHhCCcEeccCCccchhhHHHH
Q 012412 313 VVRESEQAKLPKKFSDETLT--SHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKY 390 (464)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~--~~nv~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~r 390 (464)
+++.+ .+.+++++.++ . ++|+++++|+||.++|+|+++++||||||+||++||+++|||+|++|++.||+.||++
T Consensus 312 ~~~~~-~~~l~~~~~~~--~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~ 388 (463)
T 2acv_A 312 SNSAE-KKVFPEGFLEW--MELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFR 388 (463)
T ss_dssp ECCCC-GGGSCTTHHHH--HHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHH
T ss_pred EECCC-cccCChhHHHh--hccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccchhhhHHHHHH
Confidence 99863 12466776655 4 6899999999999999988888899999999999999999999999999999999999
Q ss_pred H-HhHhcceeec-c-------CcCHHHHHHHHHHHhc-CCchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 012412 391 I-LDVWKTGLKF-P-------IVKRDAIADCISEILE-GERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLA 458 (464)
Q Consensus 391 l-~~~~G~g~~l-~-------~~~~~~l~~~i~~ll~-~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l~ 458 (464)
+ ++. |+|+.+ . .++.++|.++|+++|+ ++ +||+||+++++.+++++.+||++...+++||+++.
T Consensus 389 lv~~~-g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~~~---~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~~ 462 (463)
T 2acv_A 389 LVKEW-GVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKDS---IVHKKVQEMKEMSRNAVVDGGSSLISVGKLIDDIT 462 (463)
T ss_dssp HHHTS-CCEEESCSSCCTTCCCCCHHHHHHHHHHHTCTTC---THHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHH
T ss_pred HHHHc-CeEEEEecccCCCCccccHHHHHHHHHHHHhccH---HHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhc
Confidence 5 888 999999 2 4799999999999996 34 89999999999999999999999999999999985
|
| >2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-44 Score=358.79 Aligned_cols=396 Identities=20% Similarity=0.261 Sum_probs=264.3
Q ss_pred CCCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEccCCCCCCCCCC----ccC
Q 012412 9 TSCKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGYAQ----AES 84 (464)
Q Consensus 9 ~~~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~----~~~ 84 (464)
..++++||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+. ..|+.|++++..++. .... ..+
T Consensus 8 ~~m~~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~----~~g~~~~~~~~~~~~-~~~~~~~~~~~ 82 (424)
T 2iya_A 8 ASVTPRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVK----AAGATPVVYDSILPK-ESNPEESWPED 82 (424)
T ss_dssp ---CCCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHH----HHTCEEEECCCCSCC-TTCTTCCCCSS
T ss_pred CCcccceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHH----hCCCEEEecCccccc-cccchhhcchh
Confidence 3466789999999999999999999999999999999999998877776 568999999876543 2111 223
Q ss_pred HHHHHHHHHHhCcHHHHHHHHHhcCCCCCccEEEeCCchhhHHHHHHHcCCccEEEecchHHHHHHHhhhhcCcccCCCC
Q 012412 85 IEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLT 164 (464)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p~~ 164 (464)
....+..+.........++.+ +.++.+| |+||+|.+..|+..+|+.+|||++.+++.++........+.....+..+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~l~~-~l~~~~p-D~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (424)
T 2iya_A 83 QESAMGLFLDEAVRVLPQLED-AYADDRP-DLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGFEEDVPAVQDPTADR 160 (424)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-HTTTSCC-SEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTHHHHSGGGSCCCC--
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHhccCC-CEEEEcCcccHHHHHHHhcCCCEEEEeccccccccccccccccccccccc
Confidence 334444343333333334433 3334455 99999988888999999999999998876631110000000000000000
Q ss_pred CCceeCCCCCCCCCCCCCCccccCCCC----chHHHHHHHHH------hhhccCCcEEEecchhhhhHHHHHHHHhc-CC
Q 012412 165 GNEILLPGMPPLEPQDMPSFIHDLGSY----PAVSYMMMKFQ------FENIDKADWVLCNTFYELEEEVVEWLRKT-WS 233 (464)
Q Consensus 165 ~~~~~~p~~p~~~~~~~~~~~~~~~~~----~~~~~~~~~~~------~~~~~~~~~~l~~s~~~l~~~~~~~~~~~-~~ 233 (464)
.. .+ .++................ ..+.+.+. +. ......++.+++++++++++.. ... .+
T Consensus 161 ~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~l~~~~~~l~~~~----~~~~~~ 231 (424)
T 2iya_A 161 GE---EA-AAPAGTGDAEEGAEAEDGLVRFFTRLSAFLE-EHGVDTPATEFLIAPNRCIVALPRTFQIKG----DTVGDN 231 (424)
T ss_dssp -----------------------HHHHHHHHHHHHHHHH-HTTCCSCHHHHHHCCSSEEESSCTTTSTTG----GGCCTT
T ss_pred cc---cc-ccccccccchhhhccchhHHHHHHHHHHHHH-HcCCCCCHHHhccCCCcEEEEcchhhCCCc----cCCCCC
Confidence 00 00 0000000000000000000 01111111 10 0011145678899998887622 112 25
Q ss_pred eeeecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEE
Q 012412 234 LRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWV 313 (464)
Q Consensus 234 ~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~ 313 (464)
+++|||+.... .+..+|++..+++++|||++||......+.+..+++++++.+.+++|+
T Consensus 232 ~~~vGp~~~~~---------------------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~~~~ 290 (424)
T 2iya_A 232 YTFVGPTYGDR---------------------SHQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDWHVVLS 290 (424)
T ss_dssp EEECCCCCCCC---------------------GGGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCSSEEEEE
T ss_pred EEEeCCCCCCc---------------------ccCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCCcEEEEE
Confidence 88999875430 111235554456789999999998667889999999999988999998
Q ss_pred EcCcccCcCChhhhhhccCCCcEEEEeccChHHhhccccccceeccCChhHHHHHHHhCCcEeccCCccchhhHHHHHHh
Q 012412 314 VRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILD 393 (464)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~ 393 (464)
++.... .+.+. . .++|+++.+|+||.++|+++++ ||||||+||++||+++|+|+|++|...||+.||+++++
T Consensus 291 ~g~~~~---~~~~~-~--~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~ 362 (424)
T 2iya_A 291 VGRFVD---PADLG-E--VPPNVEVHQWVPQLDILTKASA--FITHAGMGSTMEALSNAVPMVAVPQIAEQTMNAERIVE 362 (424)
T ss_dssp CCTTSC---GGGGC-S--CCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHH
T ss_pred ECCcCC---hHHhc-c--CCCCeEEecCCCHHHHHhhCCE--EEECCchhHHHHHHHcCCCEEEecCccchHHHHHHHHH
Confidence 876421 11221 1 5789999999999999999999 99999999999999999999999999999999999999
Q ss_pred Hhcceeecc--CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 012412 394 VWKTGLKFP--IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLA 458 (464)
Q Consensus 394 ~~G~g~~l~--~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l~ 458 (464)
. |+|+.+. +++.++|.++|+++|+|+ +++++++++++.+++ .++ .+.+.+.|+++.
T Consensus 363 ~-g~g~~~~~~~~~~~~l~~~i~~ll~~~---~~~~~~~~~~~~~~~----~~~-~~~~~~~i~~~~ 420 (424)
T 2iya_A 363 L-GLGRHIPRDQVTAEKLREAVLAVASDP---GVAERLAAVRQEIRE----AGG-ARAAADILEGIL 420 (424)
T ss_dssp T-TSEEECCGGGCCHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHT----SCH-HHHHHHHHHHHH
T ss_pred C-CCEEEcCcCCCCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHHh----cCc-HHHHHHHHHHHH
Confidence 9 9999997 789999999999999997 899999999999884 233 334444444443
|
| >4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-44 Score=354.43 Aligned_cols=361 Identities=18% Similarity=0.163 Sum_probs=229.2
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEccCCCCCC---------CCC-
Q 012412 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEG---------GYA- 80 (464)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---------~~~- 80 (464)
.+.|||||+++++.||++|+++||++|++|||+|+|++++.+.+... .++.+.++....... ...
T Consensus 20 ~~~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (400)
T 4amg_A 20 FQSMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRAVAE-----AGLCAVDVSPGVNYAKLFVPDDTDVTDP 94 (400)
T ss_dssp -CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHHHHT-----TTCEEEESSTTCCSHHHHSCCC------
T ss_pred CCCCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhhHHh-----cCCeeEecCCchhHhhhccccccccccc
Confidence 45699999999999999999999999999999999999987765443 577787775432210 000
Q ss_pred ---CccCHHHHHHHHHHhCcHHHHHHHHHhcCCCCCccEEEeCCchhhHHHHHHHcCCccEEEecchHHHHHHHhhhhcC
Q 012412 81 ---QAESIEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKG 157 (464)
Q Consensus 81 ---~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~ 157 (464)
.......+...+.......+.++++.+. +++| |+||+|.+..++..+|+.+|||++.+...+..........
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~p-D~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~~~~~~~--- 169 (400)
T 4amg_A 95 MHSEGLGEGFFAEMFARVSAVAVDGALRTAR-SWRP-DLVVHTPTQGAGPLTAAALQLPCVELPLGPADSEPGLGAL--- 169 (400)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHHHHH-HHCC-SEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCCHHHHHH---
T ss_pred cchhhhhHHHHHHHHHHHHHHHHHHHHHHHH-hcCC-CEEEECcchHHHHHHHHHcCCCceeecccccccccchhhH---
Confidence 0111111112222222222233333222 2256 9999999999999999999999988654431100000000
Q ss_pred cccCCCCCCceeCCCCCCCCCCCCCCccccCCCCchHHHHHHHHHhhh-ccCCcEEEecchhhhhHHHHHHHHhcCCeee
Q 012412 158 SLELPLTGNEILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFEN-IDKADWVLCNTFYELEEEVVEWLRKTWSLRT 236 (464)
Q Consensus 158 ~~~~p~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~ 236 (464)
. ...+..... +..-. .......+......... ..+........+.
T Consensus 170 ---------------------------~-----~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 215 (400)
T 4amg_A 170 ---------------------------I-----RRAMSKDYE-RHGVTGEPTGSVRLTTTPPSVEA-LLPEDRRSPGAWP 215 (400)
T ss_dssp ---------------------------H-----HHHTHHHHH-HTTCCCCCSCEEEEECCCHHHHH-TSCGGGCCTTCEE
T ss_pred ---------------------------H-----HHHHHHHHH-HhCCCcccccchhhcccCchhhc-cCcccccCCcccC
Confidence 0 000111111 11100 11111222222111110 0000000001111
Q ss_pred ecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccC--CHHHHHHHHHHHhhCCCeEEEEE
Q 012412 237 IGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVEL--KAEEMEELAWGLKSSDQHFLWVV 314 (464)
Q Consensus 237 vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~--~~~~~~~~~~al~~~~~~~i~~~ 314 (464)
+++.... ....+.+|++..+++++|||++||.... ..+.+..+++++++.+.+++|.+
T Consensus 216 ~~~~~~~--------------------~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v~~~ 275 (400)
T 4amg_A 216 MRYVPYN--------------------GGAVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFVLTL 275 (400)
T ss_dssp CCCCCCC--------------------CCEECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEEEEC
T ss_pred ccccccc--------------------ccccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccCceEEEEe
Confidence 1111110 0122335777778899999999998743 34678889999999999999998
Q ss_pred cCcccCcCChhhhhhccCCCcEEEEeccChHHhhccccccceeccCChhHHHHHHHhCCcEeccCCccchhhHHHHHHhH
Q 012412 315 RESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDV 394 (464)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~ 394 (464)
++........ .++|+++.+|+||.++|+++++ ||||||+||++||+++|||+|++|++.||+.||+++++.
T Consensus 276 ~~~~~~~~~~-------~~~~v~~~~~~p~~~lL~~~~~--~v~h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~~ 346 (400)
T 4amg_A 276 GGGDLALLGE-------LPANVRVVEWIPLGALLETCDA--IIHHGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTGL 346 (400)
T ss_dssp CTTCCCCCCC-------CCTTEEEECCCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCC---CHHHHHHHHHH
T ss_pred cCcccccccc-------CCCCEEEEeecCHHHHhhhhhh--eeccCCccHHHHHHHhCCCEEEecCcccHHHHHHHHHHC
Confidence 7764433322 7899999999999999999999 999999999999999999999999999999999999999
Q ss_pred hcceeecc--CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Q 012412 395 WKTGLKFP--IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASL 457 (464)
Q Consensus 395 ~G~g~~l~--~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l 457 (464)
|+|+.++ +.++ ++|+++|+|+ +||++|++++++++++ .+ ...+.+.+++|
T Consensus 347 -G~g~~l~~~~~~~----~al~~lL~d~---~~r~~a~~l~~~~~~~----~~-~~~~a~~le~l 398 (400)
T 4amg_A 347 -GIGFDAEAGSLGA----EQCRRLLDDA---GLREAALRVRQEMSEM----PP-PAETAAXLVAL 398 (400)
T ss_dssp -TSEEECCTTTCSH----HHHHHHHHCH---HHHHHHHHHHHHHHTS----CC-HHHHHHHHHHH
T ss_pred -CCEEEcCCCCchH----HHHHHHHcCH---HHHHHHHHHHHHHHcC----CC-HHHHHHHHHHh
Confidence 9999997 5544 5677899997 9999999999999863 23 33444555555
|
| >1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-42 Score=337.79 Aligned_cols=373 Identities=13% Similarity=0.129 Sum_probs=249.8
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEccCCCCCCCCCC-ccCHHHHHHHH
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGYAQ-AESIEAYLERF 92 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~ 92 (464)
|||+|++.++.||++|+++||++|+++||+|+|++++...+.+. ..|+.+++++..... .... .......+..+
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~----~~g~~~~~i~~~~~~-~~~~~~~~~~~~~~~~ 75 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLA----EVGVPHVPVGPSARA-PIQRAKPLTAEDVRRF 75 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHH----HTTCCEEECCC--------CCSCCCHHHHHHH
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHH----HcCCeeeeCCCCHHH-HhhcccccchHHHHHH
Confidence 69999999999999999999999999999999999998776666 568999999865322 1111 11111112122
Q ss_pred HHhCcHHHHHHHHHhcC-CCCCccEEEeCC-chhh--HHHHHHHcCCccEEEecchHHHHHHHhhhhcCcccCCCCCCce
Q 012412 93 WQIGPQTLTELVEKMNG-SDSPVDCIVYDS-ILLW--ALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNEI 168 (464)
Q Consensus 93 ~~~~~~~l~~~~~~l~~-~~~p~DlVI~D~-~~~~--~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 168 (464)
.. ......++++.+ ..+ +|+||+|. +..+ +..+|+.+|||++.++++++... ..
T Consensus 76 ~~---~~~~~~~~~l~~~~~~-pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~-------~~----------- 133 (415)
T 1iir_A 76 TT---EAIATQFDEIPAAAEG-CAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVP-------SP----------- 133 (415)
T ss_dssp HH---HHHHHHHHHHHHHTTT-CSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSC-------CS-----------
T ss_pred HH---HHHHHHHHHHHHHhcC-CCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCC-------Cc-----------
Confidence 11 122333344331 224 59999997 6688 89999999999999887763211 00
Q ss_pred eCCCCCCCCCCCC-CC-ccccCCC--Cc-hHHHHHH------HHHhhh---------ccCCcEEEecchhhhhHHHHHHH
Q 012412 169 LLPGMPPLEPQDM-PS-FIHDLGS--YP-AVSYMMM------KFQFEN---------IDKADWVLCNTFYELEEEVVEWL 228 (464)
Q Consensus 169 ~~p~~p~~~~~~~-~~-~~~~~~~--~~-~~~~~~~------~~~~~~---------~~~~~~~l~~s~~~l~~~~~~~~ 228 (464)
++|.. .... .. .. ...+... .. .....+. ++.+.. .... .+++++++++++. .
T Consensus 134 ~~p~~-~~~~-~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~----~ 206 (415)
T 1iir_A 134 YYPPP-PLGE-PSTQDTIDIPAQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTD-HPWVAADPVLAPL----Q 206 (415)
T ss_dssp SSCCC-C----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCS-SCEECSCTTTSCC----C
T ss_pred ccCCc-cCCc-cccchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCccccccCCC-CEEEeeChhhcCC----C
Confidence 01110 0000 00 00 0000000 00 0000000 011100 0112 4678888777630 0
Q ss_pred HhcCCeeeecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhCCC
Q 012412 229 RKTWSLRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQ 308 (464)
Q Consensus 229 ~~~~~~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~ 308 (464)
+...++++|||+..+.. .+.+.++.+|++. ++++|||++||.. ...+....+++++++++.
T Consensus 207 ~~~~~~~~vG~~~~~~~----------------~~~~~~~~~~l~~--~~~~v~v~~Gs~~-~~~~~~~~~~~al~~~~~ 267 (415)
T 1iir_A 207 PTDLDAVQTGAWILPDE----------------RPLSPELAAFLDA--GPPPVYLGFGSLG-APADAVRVAIDAIRAHGR 267 (415)
T ss_dssp CCSSCCEECCCCCCCCC----------------CCCCHHHHHHHHT--SSCCEEEECC----CCHHHHHHHHHHHHHTTC
T ss_pred cccCCeEeeCCCccCcc----------------cCCCHHHHHHHhh--CCCeEEEeCCCCC-CcHHHHHHHHHHHHHCCC
Confidence 11115788998865410 1124778899975 3579999999987 678889999999999999
Q ss_pred eEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChHHhhccccccceeccCChhHHHHHHHhCCcEeccCCccchhhHH
Q 012412 309 HFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNA 388 (464)
Q Consensus 309 ~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na 388 (464)
+++|+++..... . . . .++|+++.+|+||.++|+++++ ||||||+||++||+++|+|+|++|...||..||
T Consensus 268 ~~v~~~g~~~~~-~-~----~--~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na 337 (415)
T 1iir_A 268 RVILSRGWADLV-L-P----D--DGADCFAIGEVNHQVLFGRVAA--VIHHGGAGTTHVAARAGAPQILLPQMADQPYYA 337 (415)
T ss_dssp CEEECTTCTTCC-C-S----S--CGGGEEECSSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHH
T ss_pred eEEEEeCCCccc-c-c----C--CCCCEEEeCcCChHHHHhhCCE--EEeCCChhHHHHHHHcCCCEEECCCCCccHHHH
Confidence 999988764322 1 1 1 5689999999999999999999 999999999999999999999999999999999
Q ss_pred HHHHhHhcceeecc--CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHh
Q 012412 389 KYILDVWKTGLKFP--IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLAC 459 (464)
Q Consensus 389 ~rl~~~~G~g~~l~--~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l~~ 459 (464)
+++++. |+|+.++ +++.++|.++|+++ .|+ +++++++++++.+++ ....+.+.+.++++..
T Consensus 338 ~~l~~~-g~g~~~~~~~~~~~~l~~~i~~l-~~~---~~~~~~~~~~~~~~~-----~~~~~~~~~~i~~~~~ 400 (415)
T 1iir_A 338 GRVAEL-GVGVAHDGPIPTFDSLSAALATA-LTP---ETHARATAVAGTIRT-----DGAAVAARLLLDAVSR 400 (415)
T ss_dssp HHHHHH-TSEEECSSSSCCHHHHHHHHHHH-TSH---HHHHHHHHHHHHSCS-----CHHHHHHHHHHHHHHT
T ss_pred HHHHHC-CCcccCCcCCCCHHHHHHHHHHH-cCH---HHHHHHHHHHHHHhh-----cChHHHHHHHHHHHHh
Confidence 999999 9999997 78999999999999 886 999999999988863 3334455555555543
|
| >3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-40 Score=327.05 Aligned_cols=360 Identities=17% Similarity=0.223 Sum_probs=249.7
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEccCCCCCCCCC---CccCHHH
Q 012412 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGYA---QAESIEA 87 (464)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~~~~~~~ 87 (464)
.+||||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+. ..|+.+.+++...+..... .......
T Consensus 18 ~~m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~----~~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (415)
T 3rsc_A 18 RHMAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVR----AAGATVVPYQSEIIDADAAEVFGSDDLGV 93 (415)
T ss_dssp -CCCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHH----HTTCEEEECCCSTTTCCHHHHHHSSSSCH
T ss_pred ccCCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHH----hcCCEEEeccccccccccchhhccccHHH
Confidence 45789999999999999999999999999999999999998888887 6789999998554331100 0001111
Q ss_pred HHHH-HHHhCcHHHHHHHHHhcCCCCCccEEEeC-CchhhHHHHHHHcCCccEEEecchHHHHHHHhhhhcCcccCCCCC
Q 012412 88 YLER-FWQIGPQTLTELVEKMNGSDSPVDCIVYD-SILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTG 165 (464)
Q Consensus 88 ~~~~-~~~~~~~~l~~~~~~l~~~~~p~DlVI~D-~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~ 165 (464)
.+.. +.......+..+.+.+ ++++| |+||+| ....++..+|+.+|||++.+.+...... .....+ .
T Consensus 94 ~~~~~~~~~~~~~~~~l~~~l-~~~~P-DlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~--------~~~~~~-~- 161 (415)
T 3rsc_A 94 RPHLMYLRENVSVLRATAEAL-DGDVP-DLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNE--------HYSFSQ-D- 161 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-SSSCC-SEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCS--------SCCHHH-H-
T ss_pred HHHHHHHHHHHHHHHHHHHHH-hccCC-CEEEECchhhhHHHHHHHHhCCCEEEEEecccccC--------cccccc-c-
Confidence 1222 2332223334444444 44466 999999 7888899999999999998765431100 000000 0
Q ss_pred CceeCCCCCCCCCCCCCCccccCCCCchHHHHHHHHHhhhc----------cC-CcEEEecchhhhhHHHHHHHHhc--C
Q 012412 166 NEILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENI----------DK-ADWVLCNTFYELEEEVVEWLRKT--W 232 (464)
Q Consensus 166 ~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~-~~~~l~~s~~~l~~~~~~~~~~~--~ 232 (464)
..+.. . ...+. ....+...+. +..... .. .+..++...+++++ +... .
T Consensus 162 ---~~~~~---~-~~~p~------~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~-----~~~~~~~ 222 (415)
T 3rsc_A 162 ---MVTLA---G-TIDPL------DLPVFRDTLR-DLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQI-----AGDTFDD 222 (415)
T ss_dssp ---HHHHH---T-CCCGG------GCHHHHHHHH-HHHHHTTCCCCHHHHHTCCCSEEEESSCTTTST-----TGGGCCT
T ss_pred ---ccccc---c-cCChh------hHHHHHHHHH-HHHHHcCCCCChhhhhcCCCCeEEEEcCcccCC-----CcccCCC
Confidence 00000 0 00000 0011111111 111111 11 15666666665554 2221 1
Q ss_pred CeeeecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhCCCeEEE
Q 012412 233 SLRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLW 312 (464)
Q Consensus 233 ~~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~ 312 (464)
++.++||..... .+..+|....+++++||+++||......+.+..+++++++.+.+++|
T Consensus 223 ~~~~vGp~~~~~---------------------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~v~ 281 (415)
T 3rsc_A 223 RFVFVGPCFDDR---------------------RFLGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQPWHVVM 281 (415)
T ss_dssp TEEECCCCCCCC---------------------GGGCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSSCEEEE
T ss_pred ceEEeCCCCCCc---------------------ccCcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCCcEEEE
Confidence 478888875541 11122433345678999999999876778899999999999999999
Q ss_pred EEcCcccCcCChhhhhhccCCCcEEEEeccChHHhhccccccceeccCChhHHHHHHHhCCcEeccCCccchhhHHHHHH
Q 012412 313 VVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYIL 392 (464)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~ 392 (464)
.++.... .+.+. . .++|+++.+|+|+.++|++||+ ||||||.||++||+++|+|+|++|...||..||++++
T Consensus 282 ~~g~~~~---~~~l~-~--~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~ 353 (415)
T 3rsc_A 282 TLGGQVD---PAALG-D--LPPNVEAHRWVPHVKVLEQATV--CVTHGGMGTLMEALYWGRPLVVVPQSFDVQPMARRVD 353 (415)
T ss_dssp ECTTTSC---GGGGC-C--CCTTEEEESCCCHHHHHHHEEE--EEESCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHH
T ss_pred EeCCCCC---hHHhc-C--CCCcEEEEecCCHHHHHhhCCE--EEECCcHHHHHHHHHhCCCEEEeCCcchHHHHHHHHH
Confidence 8875421 12222 1 6789999999999999999999 9999999999999999999999999999999999999
Q ss_pred hHhcceeecc--CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHH
Q 012412 393 DVWKTGLKFP--IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKE 438 (464)
Q Consensus 393 ~~~G~g~~l~--~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~ 438 (464)
+. |+|..+. +++++.|.++|.++|+|+ +++++++++++.+.+
T Consensus 354 ~~-g~g~~~~~~~~~~~~l~~~i~~ll~~~---~~~~~~~~~~~~~~~ 397 (415)
T 3rsc_A 354 QL-GLGAVLPGEKADGDTLLAAVGAVAADP---ALLARVEAMRGHVRR 397 (415)
T ss_dssp HH-TCEEECCGGGCCHHHHHHHHHHHHTCH---HHHHHHHHHHHHHHH
T ss_pred Hc-CCEEEcccCCCCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHHh
Confidence 99 9999998 789999999999999997 999999999999885
|
| >1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-41 Score=330.92 Aligned_cols=356 Identities=12% Similarity=0.089 Sum_probs=246.9
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEccCCCCCCCCCC--ccCHHHHHHH
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGYAQ--AESIEAYLER 91 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~~ 91 (464)
|||+|++.++.||++|+++||++|+++||+|+|++++...+.+. ..|+.+++++..... .... .......+..
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~----~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 75 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLA----EVGVPHVPVGLPQHM-MLQEGMPPPPPEEEQR 75 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHH----HHTCCEEECSCCGGG-CCCTTSCCCCHHHHHH
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHH----HcCCeeeecCCCHHH-HHhhccccchhHHHHH
Confidence 69999999999999999999999999999999999988777666 568999998854321 1110 0111111222
Q ss_pred HHHhCcHHHHHHHHHhcC-CCCCccEEEeCC-chhh--HHHHHHHcCCccEEEecchHHHHHHHhhhhcCcccCCCCCCc
Q 012412 92 FWQIGPQTLTELVEKMNG-SDSPVDCIVYDS-ILLW--ALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNE 167 (464)
Q Consensus 92 ~~~~~~~~l~~~~~~l~~-~~~p~DlVI~D~-~~~~--~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 167 (464)
+.. ..+..+++.+.+ ..+ +|+||+|. +..+ +..+|+.+|||++.+.+++.... .
T Consensus 76 ~~~---~~~~~~~~~l~~~~~~-pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~--------------~---- 133 (416)
T 1rrv_A 76 LAA---MTVEMQFDAVPGAAEG-CAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLA--------------S---- 133 (416)
T ss_dssp HHH---HHHHHHHHHHHHHTTT-CSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSC--------------C----
T ss_pred HHH---HHHHHHHHHHHHHhcC-CCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCC--------------C----
Confidence 211 112333333331 224 59999996 4566 88999999999999877652211 0
Q ss_pred eeCC-CCCCCCC-CC-CCCccc-c-CC------CCchHHHHHHHHHhh---------hccCCcEEEecchhhhhHHHHHH
Q 012412 168 ILLP-GMPPLEP-QD-MPSFIH-D-LG------SYPAVSYMMMKFQFE---------NIDKADWVLCNTFYELEEEVVEW 227 (464)
Q Consensus 168 ~~~p-~~p~~~~-~~-~~~~~~-~-~~------~~~~~~~~~~~~~~~---------~~~~~~~~l~~s~~~l~~~~~~~ 227 (464)
.++| ..+ +.. .. ...... . .. ....... +. +.+. ..... .++++++++++++
T Consensus 134 ~~~p~~~~-~~~~~~r~~n~~~~~~~~~~~~~~~~~~~~~-~~-~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~---- 205 (416)
T 1rrv_A 134 PHLPPAYD-EPTTPGVTDIRVLWEERAARFADRYGPTLNR-RR-AEIGLPPVEDVFGYGHGE-RPLLAADPVLAPL---- 205 (416)
T ss_dssp SSSCCCBC-SCCCTTCCCHHHHHHHHHHHHHHHHHHHHHH-HH-HHTTCCCCSCHHHHTTCS-SCEECSCTTTSCC----
T ss_pred cccCCCCC-CCCCchHHHHHHHHHHHHHHHHHHhHHHHHH-HH-HHcCCCCCCchhhhccCC-CeEEccCccccCC----
Confidence 0011 000 000 00 000000 0 00 0000001 11 1110 01122 5788888877641
Q ss_pred HHhcCCeeeecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEEeccccc-CCHHHHHHHHHHHhhC
Q 012412 228 LRKTWSLRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVE-LKAEEMEELAWGLKSS 306 (464)
Q Consensus 228 ~~~~~~~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~-~~~~~~~~~~~al~~~ 306 (464)
....++++|||+..+.. .+.+.++.+|++.. +++|||++||... ...+.+..+++++++.
T Consensus 206 -~~~~~~~~vG~~~~~~~----------------~~~~~~~~~~l~~~--~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~ 266 (416)
T 1rrv_A 206 -QPDVDAVQTGAWLLSDE----------------RPLPPELEAFLAAG--SPPVHIGFGSSSGRGIADAAKVAVEAIRAQ 266 (416)
T ss_dssp -CSSCCCEECCCCCCCCC----------------CCCCHHHHHHHHSS--SCCEEECCTTCCSHHHHHHHHHHHHHHHHT
T ss_pred -CCCCCeeeECCCccCcc----------------CCCCHHHHHHHhcC--CCeEEEecCCCCccChHHHHHHHHHHHHHC
Confidence 11126789998866511 01247788999753 5789999999863 4567888999999999
Q ss_pred CCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChHHhhccccccceeccCChhHHHHHHHhCCcEeccCCccchhh
Q 012412 307 DQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQST 386 (464)
Q Consensus 307 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~ 386 (464)
+.+++|+++..... . .. .++|+.+.+|+||.++|+++++ ||||||+||++||+++|+|+|++|...||..
T Consensus 267 ~~~~v~~~g~~~~~-~-----~~--~~~~v~~~~~~~~~~ll~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~ 336 (416)
T 1rrv_A 267 GRRVILSRGWTELV-L-----PD--DRDDCFAIDEVNFQALFRRVAA--VIHHGSAGTEHVATRAGVPQLVIPRNTDQPY 336 (416)
T ss_dssp TCCEEEECTTTTCC-C-----SC--CCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSBTHHH
T ss_pred CCeEEEEeCCcccc-c-----cC--CCCCEEEeccCChHHHhccCCE--EEecCChhHHHHHHHcCCCEEEccCCCCcHH
Confidence 99999998765322 1 11 6789999999999999999999 9999999999999999999999999999999
Q ss_pred HHHHHHhHhcceeecc--CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHH
Q 012412 387 NAKYILDVWKTGLKFP--IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKE 438 (464)
Q Consensus 387 na~rl~~~~G~g~~l~--~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~ 438 (464)
||+++++. |+|+.++ +++.+.|.++|+++ .|+ +++++++++++.+++
T Consensus 337 na~~l~~~-g~g~~~~~~~~~~~~l~~~i~~l-~~~---~~~~~~~~~~~~~~~ 385 (416)
T 1rrv_A 337 FAGRVAAL-GIGVAHDGPTPTFESLSAALTTV-LAP---ETRARAEAVAGMVLT 385 (416)
T ss_dssp HHHHHHHH-TSEEECSSSCCCHHHHHHHHHHH-TSH---HHHHHHHHHTTTCCC
T ss_pred HHHHHHHC-CCccCCCCCCCCHHHHHHHHHHh-hCH---HHHHHHHHHHHHHhh
Confidence 99999999 9999987 78999999999999 886 999999999988873
|
| >3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-39 Score=319.36 Aligned_cols=374 Identities=18% Similarity=0.269 Sum_probs=256.6
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEccCCCCCCCC---CCccCHHHH
Q 012412 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGY---AQAESIEAY 88 (464)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~~ 88 (464)
+|+||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+. ..|+.+.+++...+.... .........
T Consensus 3 ~M~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~----~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (402)
T 3ia7_A 3 RQRHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVK----AAGAEVVLYKSEFDTFHVPEVVKQEDAETQ 78 (402)
T ss_dssp CCCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHH----HTTCEEEECCCGGGTSSSSSSSCCTTHHHH
T ss_pred CCCEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHH----HcCCEEEecccccccccccccccccchHHH
Confidence 4579999999999999999999999999999999999988888877 678999998754332110 112233444
Q ss_pred HHH-HHHhCcHHHHHHHHHhcCCCCCccEEEeC-CchhhHHHHHHHcCCccEEEecchHHHHHHHhhhhcCcccCCCCCC
Q 012412 89 LER-FWQIGPQTLTELVEKMNGSDSPVDCIVYD-SILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGN 166 (464)
Q Consensus 89 ~~~-~~~~~~~~l~~~~~~l~~~~~p~DlVI~D-~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 166 (464)
+.. +.......+..+.+.+. +++| |+||+| .+..++..+|+.+|||++.+.+...... ....
T Consensus 79 ~~~~~~~~~~~~~~~l~~~l~-~~~p-D~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~--------~~~~------ 142 (402)
T 3ia7_A 79 LHLVYVRENVAILRAAEEALG-DNPP-DLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANE--------HYSL------ 142 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT-TCCC-SEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBT--------TBCH------
T ss_pred HHHHHHHHHHHHHHHHHHHHh-ccCC-CEEEECchHHHHHHHHHHhhCCCEEEEecccccCc--------cccc------
Confidence 444 44433334445544443 4466 999999 7888899999999999998765431100 0000
Q ss_pred ceeCCCCCCCCCCCCCCccccCCCCchHHHHHHHHHhhhc----------cC-CcEEEecchhhhhHHHHHHHHhc--CC
Q 012412 167 EILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENI----------DK-ADWVLCNTFYELEEEVVEWLRKT--WS 233 (464)
Q Consensus 167 ~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~-~~~~l~~s~~~l~~~~~~~~~~~--~~ 233 (464)
.+.+........+. ....+...+. +..... .. .+..++...+++++ .... .+
T Consensus 143 ---~~~~~~~~~~~~~~------~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~-----~~~~~~~~ 207 (402)
T 3ia7_A 143 ---FKELWKSNGQRHPA------DVEAVHSVLV-DLLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQP-----FAETFDER 207 (402)
T ss_dssp ---HHHHHHHHTCCCGG------GSHHHHHHHH-HHHHTTTCCSCHHHHHTCCCSCEEESSCGGGST-----TGGGCCTT
T ss_pred ---cccccccccccChh------hHHHHHHHHH-HHHHHcCCCCChhhhhcCCCCeEEEEcChHhCC-----ccccCCCC
Confidence 00000000000000 0011111111 111110 11 14556666555554 1111 14
Q ss_pred eeeecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEE
Q 012412 234 LRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWV 313 (464)
Q Consensus 234 ~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~ 313 (464)
+.++||..... .+...|....+++++||+++||......+.+..+++++++.+.++++.
T Consensus 208 ~~~vGp~~~~~---------------------~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (402)
T 3ia7_A 208 FAFVGPTLTGR---------------------DGQPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVVMA 266 (402)
T ss_dssp EEECCCCCCC-------------------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEEEE
T ss_pred eEEeCCCCCCc---------------------ccCCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEEEE
Confidence 78888875541 112234433456789999999998777788999999999999899888
Q ss_pred EcCcccCcCChhhhhhccCCCcEEEEeccChHHhhccccccceeccCChhHHHHHHHhCCcEeccCC-ccchhhHHHHHH
Q 012412 314 VRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQ-WSDQSTNAKYIL 392 (464)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~-~~DQ~~na~rl~ 392 (464)
++.... .+.+. . .++|+++.+|+|+.++|++||+ ||||||.||++||+++|+|+|++|. ..||..||++++
T Consensus 267 ~g~~~~---~~~~~-~--~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~ 338 (402)
T 3ia7_A 267 IGGFLD---PAVLG-P--LPPNVEAHQWIPFHSVLAHARA--CLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSAERVI 338 (402)
T ss_dssp CCTTSC---GGGGC-S--CCTTEEEESCCCHHHHHTTEEE--EEECCCHHHHHHHHHTTCCEEECGGGCGGGHHHHHHHH
T ss_pred eCCcCC---hhhhC-C--CCCcEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCCcccHHHHHHHHH
Confidence 875421 12222 1 6789999999999999999999 9999999999999999999999999 999999999999
Q ss_pred hHhcceeecc--CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 012412 393 DVWKTGLKFP--IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLA 458 (464)
Q Consensus 393 ~~~G~g~~l~--~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l~ 458 (464)
+. |+|..+. +++++.|.+++.++|+|+ +++++++++++.+.+ +++..+ +.+.++++.
T Consensus 339 ~~-g~g~~~~~~~~~~~~l~~~~~~ll~~~---~~~~~~~~~~~~~~~----~~~~~~-~~~~i~~~~ 397 (402)
T 3ia7_A 339 EL-GLGSVLRPDQLEPASIREAVERLAADS---AVRERVRRMQRDILS----SGGPAR-AADEVEAYL 397 (402)
T ss_dssp HT-TSEEECCGGGCSHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHT----SCHHHH-HHHHHHHHH
T ss_pred Hc-CCEEEccCCCCCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHhh----CChHHH-HHHHHHHHH
Confidence 99 9999998 789999999999999997 999999999988874 344344 444444443
|
| >3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-40 Score=325.80 Aligned_cols=363 Identities=15% Similarity=0.149 Sum_probs=241.8
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEccCCCCCCCCCCccCHHHHHHHHH
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGYAQAESIEAYLERFW 93 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 93 (464)
|||+|++.++.||++|+++||++|+++||+|+|++++...+.+. ..|+.+.+++....................+.
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~----~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 76 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCA----EVGVPMVPVGRAVRAGAREPGELPPGAAEVVT 76 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHH----HTTCCEEECSSCSSGGGSCTTCCCTTCGGGHH
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHH----HcCCceeecCCCHHHHhccccCCHHHHHHHHH
Confidence 68999999999999999999999999999999999998888887 67899999975433100000000000111111
Q ss_pred HhCcHHHHHHHHHhcCCCCCccEEEeCCchhhH---HHHHHHcCCccEEEecchHHHHHHHhhhhcCcccCCCCCCceeC
Q 012412 94 QIGPQTLTELVEKMNGSDSPVDCIVYDSILLWA---LDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNEILL 170 (464)
Q Consensus 94 ~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~~~~---~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 170 (464)
......++++...+ + +| |+||+|.....+ ..+|+.+|||++.+..+++...+
T Consensus 77 ~~~~~~~~~l~~~~-~--~p-D~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~--------------------- 131 (404)
T 3h4t_A 77 EVVAEWFDKVPAAI-E--GC-DAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPS--------------------- 131 (404)
T ss_dssp HHHHHHHHHHHHHH-T--TC-SEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGG---------------------
T ss_pred HHHHHHHHHHHHHh-c--CC-CEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCC---------------------
Confidence 11112222222222 2 34 999998665434 78899999999988776632110
Q ss_pred CCCCCCCCCCCCCccccCCCCchHHHHHH---HHHhhhc--c---------CCcEEEecchhhhhHHHHHHHHhcCCeee
Q 012412 171 PGMPPLEPQDMPSFIHDLGSYPAVSYMMM---KFQFENI--D---------KADWVLCNTFYELEEEVVEWLRKTWSLRT 236 (464)
Q Consensus 171 p~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~--~---------~~~~~l~~s~~~l~~~~~~~~~~~~~~~~ 236 (464)
+.. .......+ ....+.+. .+..... . ..+..+.+..+.+.+.. +...++.+
T Consensus 132 ~~~---------~~~~~~~~-~~~~~~~~~~~~~~~~~lgl~~~~~~~~~~~~~~~l~~~~~~l~p~~----~~~~~~~~ 197 (404)
T 3h4t_A 132 EQS---------QAERDMYN-QGADRLFGDAVNSHRASIGLPPVEHLYDYGYTDQPWLAADPVLSPLR----PTDLGTVQ 197 (404)
T ss_dssp GSC---------HHHHHHHH-HHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTTTSCCC----TTCCSCCB
T ss_pred hhH---------HHHHHHHH-HHHHHHhHHHHHHHHHHcCCCCCcchhhccccCCeEEeeCcceeCCC----CCCCCeEE
Confidence 000 00000000 00000000 0000000 0 01112333333332200 00012445
Q ss_pred ecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEEcC
Q 012412 237 IGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRE 316 (464)
Q Consensus 237 vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~ 316 (464)
+|+...+. ..+.++++.+|++. ++++|||++||... +.+.+..+++++++.+.+++|+++.
T Consensus 198 ~G~~~~~~----------------~~~~~~~l~~~l~~--~~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~~~vv~~~g~ 258 (404)
T 3h4t_A 198 TGAWILPD----------------QRPLSAELEGFLRA--GSPPVYVGFGSGPA-PAEAARVAIEAVRAQGRRVVLSSGW 258 (404)
T ss_dssp CCCCCCCC----------------CCCCCHHHHHHHHT--SSCCEEECCTTSCC-CTTHHHHHHHHHHHTTCCEEEECTT
T ss_pred eCccccCC----------------CCCCCHHHHHHHhc--CCCeEEEECCCCCC-cHHHHHHHHHHHHhCCCEEEEEeCC
Confidence 55443220 11235788889884 56799999999977 7788999999999999999999876
Q ss_pred cccCcCChhhhhhccCCCcEEEEeccChHHhhccccccceeccCChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhc
Q 012412 317 SEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWK 396 (464)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G 396 (464)
...... . .++|+++.+|+|+.++|+++++ ||||||+||+.||+++|+|+|++|...||+.||+++++. |
T Consensus 259 ~~~~~~-~-------~~~~v~~~~~~~~~~ll~~~d~--~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~~-G 327 (404)
T 3h4t_A 259 AGLGRI-D-------EGDDCLVVGEVNHQVLFGRVAA--VVHHGGAGTTTAVTRAGAPQVVVPQKADQPYYAGRVADL-G 327 (404)
T ss_dssp TTCCCS-S-------CCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHH-T
T ss_pred cccccc-c-------CCCCEEEecCCCHHHHHhhCcE--EEECCcHHHHHHHHHcCCCEEEcCCcccHHHHHHHHHHC-C
Confidence 532221 1 5789999999999999999999 999999999999999999999999999999999999999 9
Q ss_pred ceeecc--CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHh
Q 012412 397 TGLKFP--IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLAC 459 (464)
Q Consensus 397 ~g~~l~--~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l~~ 459 (464)
+|..+. +++.+.|.++|+++|+ + +|+++++++++.+++ ...+.+.+.++++..
T Consensus 328 ~g~~l~~~~~~~~~l~~ai~~ll~-~---~~~~~~~~~~~~~~~------~~~~~~~~~i~~~~~ 382 (404)
T 3h4t_A 328 VGVAHDGPTPTVESLSAALATALT-P---GIRARAAAVAGTIRT------DGTTVAAKLLLEAIS 382 (404)
T ss_dssp SEEECSSSSCCHHHHHHHHHHHTS-H---HHHHHHHHHHTTCCC------CHHHHHHHHHHHHHH
T ss_pred CEeccCcCCCCHHHHHHHHHHHhC-H---HHHHHHHHHHHHHhh------hHHHHHHHHHHHHHh
Confidence 999998 7899999999999998 7 999999999998862 334444455554443
|
| >2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-39 Score=325.21 Aligned_cols=376 Identities=14% Similarity=0.143 Sum_probs=241.6
Q ss_pred CCCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEccCCCCCCC----------
Q 012412 9 TSCKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGG---------- 78 (464)
Q Consensus 9 ~~~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---------- 78 (464)
....+|||+|++.++.||++|+++||++|+++||+|+|++++...+.+. ..|+.+++++...+...
T Consensus 16 ~~~~~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~----~~G~~~~~i~~~~~~~~~~~~~~~~~~ 91 (441)
T 2yjn_A 16 PRGSHMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDIT----AAGLTAVPVGTDVDLVDFMTHAGHDII 91 (441)
T ss_dssp ---CCCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHH----TTTCCEEECSCCCCHHHHHHHTTHHHH
T ss_pred ccCCccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHHH----hCCCceeecCCccchHHHhhhhhcccc
Confidence 4456789999999999999999999999999999999999988877777 67899999985431000
Q ss_pred -----CC-----Cc-cCHH---HHHHHHHHhCc-----H-HHHHHHHHhcCCCCCccEEEeCCchhhHHHHHHHcCCccE
Q 012412 79 -----YA-----QA-ESIE---AYLERFWQIGP-----Q-TLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGA 138 (464)
Q Consensus 79 -----~~-----~~-~~~~---~~~~~~~~~~~-----~-~l~~~~~~l~~~~~p~DlVI~D~~~~~~~~~A~~~giP~v 138 (464)
.+ .. .... .....+..... . .+.++++.+.+ ++| |+||+|.++.++..+|+.+|||++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~p-DlVv~d~~~~~~~~aA~~lgiP~v 169 (441)
T 2yjn_A 92 DYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRK-WRP-DLVIWEPLTFAAPIAAAVTGTPHA 169 (441)
T ss_dssp HHHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHH-HCC-SEEEECTTCTHHHHHHHHHTCCEE
T ss_pred cccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHh-cCC-CEEEecCcchhHHHHHHHcCCCEE
Confidence 00 00 0111 11111211111 2 34444443332 255 999999887889999999999999
Q ss_pred EEecchHHHHHHHhhhhcCcccCCCCCCceeCCCCCCCCCCCCCCccccCCCCchHHHHHHHHHhhhcc---------CC
Q 012412 139 PFLTQSCAVDYIYYHVKKGSLELPLTGNEILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENID---------KA 209 (464)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~ 209 (464)
.+...+.........+.... .+.|.. . . ...+.+.+. +....+. ..
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~---------~~~~~~---~------~------~~~~~~~l~-~~~~~~g~~~~~~~~~~~ 224 (441)
T 2yjn_A 170 RLLWGPDITTRARQNFLGLL---------PDQPEE---H------R------EDPLAEWLT-WTLEKYGGPAFDEEVVVG 224 (441)
T ss_dssp EECSSCCHHHHHHHHHHHHG---------GGSCTT---T------C------CCHHHHHHH-HHHHHTTCCCCCGGGTSC
T ss_pred EEecCCCcchhhhhhhhhhc---------cccccc---c------c------cchHHHHHH-HHHHHcCCCCCCccccCC
Confidence 98655432211111100000 001100 0 0 011222222 2111111 12
Q ss_pred cEEEecchhhhhHHHHHHHHhcCCeeeecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccc
Q 012412 210 DWVLCNTFYELEEEVVEWLRKTWSLRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFV 289 (464)
Q Consensus 210 ~~~l~~s~~~l~~~~~~~~~~~~~~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~ 289 (464)
+..+....+.+++ +... +...+++... . .+.++.+|++..+++++|||++||..
T Consensus 225 ~~~l~~~~~~~~~-----~~~~-~~~~~~~~~~-------------------~-~~~~~~~~l~~~~~~~~v~v~~Gs~~ 278 (441)
T 2yjn_A 225 QWTIDPAPAAIRL-----DTGL-KTVGMRYVDY-------------------N-GPSVVPEWLHDEPERRRVCLTLGISS 278 (441)
T ss_dssp SSEEECSCGGGSC-----CCCC-CEEECCCCCC-------------------C-SSCCCCGGGSSCCSSCEEEEEC----
T ss_pred CeEEEecCccccC-----CCCC-CCCceeeeCC-------------------C-CCcccchHhhcCCCCCEEEEECCCCc
Confidence 2233333332221 0000 0011111100 0 12334568875566789999999987
Q ss_pred cC---CHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChHHhhccccccceeccCChhHHH
Q 012412 290 EL---KAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTM 366 (464)
Q Consensus 290 ~~---~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~ 366 (464)
.. ..+.+..+++++++.+.+++|++++...+.+.. .++|+++.+|+|+.++|+.|++ ||||||.||++
T Consensus 279 ~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~~l~~-------~~~~v~~~~~~~~~~ll~~ad~--~V~~~G~~t~~ 349 (441)
T 2yjn_A 279 RENSIGQVSIEELLGAVGDVDAEIIATFDAQQLEGVAN-------IPDNVRTVGFVPMHALLPTCAA--TVHHGGPGSWH 349 (441)
T ss_dssp ------CCSTTTTHHHHHTSSSEEEECCCTTTTSSCSS-------CCSSEEECCSCCHHHHGGGCSE--EEECCCHHHHH
T ss_pred ccccChHHHHHHHHHHHHcCCCEEEEEECCcchhhhcc-------CCCCEEEecCCCHHHHHhhCCE--EEECCCHHHHH
Confidence 43 346677888999988999999987643322221 5789999999999999999999 99999999999
Q ss_pred HHHHhCCcEeccCCccchhhHHHHHHhHhcceeecc--CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHcCC
Q 012412 367 EALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP--IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGG 444 (464)
Q Consensus 367 eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~--~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~gg 444 (464)
||+++|+|+|++|...||..||+++++. |+|+.++ +++++.|.++|.++|+|+ +++++++++++.+++ ..
T Consensus 350 Ea~~~G~P~i~~p~~~dQ~~na~~l~~~-g~g~~~~~~~~~~~~l~~~i~~ll~~~---~~~~~~~~~~~~~~~----~~ 421 (441)
T 2yjn_A 350 TAAIHGVPQVILPDGWDTGVRAQRTQEF-GAGIALPVPELTPDQLRESVKRVLDDP---AHRAGAARMRDDMLA----EP 421 (441)
T ss_dssp HHHHTTCCEEECCCSHHHHHHHHHHHHH-TSEEECCTTTCCHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHT----SC
T ss_pred HHHHhCCCEEEeCCcccHHHHHHHHHHc-CCEEEcccccCCHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHc----CC
Confidence 9999999999999999999999999999 9999998 689999999999999997 999999999998874 33
Q ss_pred CcHHHHHHHHHHHHh
Q 012412 445 SSDSNIDEFVASLAC 459 (464)
Q Consensus 445 ~~~~~~~~~~~~l~~ 459 (464)
+ .+.+.+.++++..
T Consensus 422 ~-~~~~~~~i~~~~~ 435 (441)
T 2yjn_A 422 S-PAEVVGICEELAA 435 (441)
T ss_dssp C-HHHHHHHHHHHHH
T ss_pred C-HHHHHHHHHHHHH
Confidence 3 4444555555443
|
| >2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-39 Score=317.89 Aligned_cols=366 Identities=19% Similarity=0.221 Sum_probs=244.8
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEccCCCCCCCCCC----ccCHH
Q 012412 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGYAQ----AESIE 86 (464)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~----~~~~~ 86 (464)
+++|||+|++.++.||++|+++|+++|+++||+|++++++...+.+. ..|+.+++++...+. .... ..+..
T Consensus 5 m~m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~----~~g~~~~~~~~~~~~-~~~~~~~~~~~~~ 79 (430)
T 2iyf_A 5 TTPAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVA----ATGPRPVLYHSTLPG-PDADPEAWGSTLL 79 (430)
T ss_dssp ---CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHH----TTSCEEEECCCCSCC-TTSCGGGGCSSHH
T ss_pred cccceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHH----hCCCEEEEcCCcCcc-ccccccccchhhH
Confidence 45789999999999999999999999999999999999988766666 568999998865432 1111 12333
Q ss_pred HHHHHHHHhCcHHHHHHHHHhcCCCCCccEEEeCCchhhHHHHHHHcCCccEEEecchHHHHHHHhhhhcCcccCCCCCC
Q 012412 87 AYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGN 166 (464)
Q Consensus 87 ~~~~~~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 166 (464)
..+..+.......+..+.+.+. +.+| |+||+|.+..++..+|+.+|||++.+.+.......+...+..+...
T Consensus 80 ~~~~~~~~~~~~~~~~l~~~l~-~~~p-D~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~------ 151 (430)
T 2iyf_A 80 DNVEPFLNDAIQALPQLADAYA-DDIP-DLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGYEEEVAEPMWR------ 151 (430)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT-TSCC-SEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTHHHHTHHHHHH------
T ss_pred HHHHHHHHHHHHHHHHHHHHhh-ccCC-CEEEECCccHHHHHHHHHcCCCEEEEecccccccccccccccchhh------
Confidence 3333333322333344444333 3355 9999998777899999999999998876542000000000000000
Q ss_pred ceeCCCCCCCCCCCCCCccccCCCCchHHHHHHHHHh------hhccCCcEEEecchhhhhHHHHHHHHhcCC-eeeecc
Q 012412 167 EILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQF------ENIDKADWVLCNTFYELEEEVVEWLRKTWS-LRTIGP 239 (464)
Q Consensus 167 ~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~-~~~vgp 239 (464)
. .... .. ... ....+.+.+. +.. ......+.+++++.+++++.... . ..+ +++|||
T Consensus 152 ~--~~~~--------~~-~~~--~~~~~~~~~~-~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~--~~~~v~~vG~ 214 (430)
T 2iyf_A 152 E--PRQT--------ER-GRA--YYARFEAWLK-ENGITEHPDTFASHPPRSLVLIPKALQPHADR-V--DEDVYTFVGA 214 (430)
T ss_dssp H--HHHS--------HH-HHH--HHHHHHHHHH-HTTCCSCHHHHHHCCSSEEECSCGGGSTTGGG-S--CTTTEEECCC
T ss_pred h--hccc--------hH-HHH--HHHHHHHHHH-HhCCCCCHHHHhcCCCcEEEeCcHHhCCCccc-C--CCccEEEeCC
Confidence 0 0000 00 000 0000111111 100 01114567888888877752111 1 124 888997
Q ss_pred cCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhC-CCeEEEEEcCcc
Q 012412 240 TIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSS-DQHFLWVVRESE 318 (464)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~ 318 (464)
.++... +..+|....+++++||+++||......+.+..+++++++. +.+++|+++...
T Consensus 215 ~~~~~~---------------------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~~~~~~~G~~~ 273 (430)
T 2iyf_A 215 CQGDRA---------------------EEGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGWHLVLQIGRKV 273 (430)
T ss_dssp CC--------------------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTTEEEEEECC---
T ss_pred cCCCCC---------------------CCCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCCeEEEEEeCCCC
Confidence 644200 0012333234678999999999855678899999999886 788888887542
Q ss_pred cCcCChhhhhhccCCCcEEEEeccChHHhhccccccceeccCChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcce
Q 012412 319 QAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTG 398 (464)
Q Consensus 319 ~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g 398 (464)
. .+.+. . .++|+.+.+|+|+.++|+++++ ||||||+||++||+++|+|+|++|...||..|++++++. |+|
T Consensus 274 ~---~~~l~-~--~~~~v~~~~~~~~~~~l~~ad~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~~-g~g 344 (430)
T 2iyf_A 274 T---PAELG-E--LPDNVEVHDWVPQLAILRQADL--FVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADMLQGL-GVA 344 (430)
T ss_dssp C---GGGGC-S--CCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHT-TSE
T ss_pred C---hHHhc-c--CCCCeEEEecCCHHHHhhccCE--EEECCCccHHHHHHHhCCCEEECCCccchHHHHHHHHHc-CCE
Confidence 1 12221 1 5789999999999999999999 999999999999999999999999999999999999999 999
Q ss_pred eecc--CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHH
Q 012412 399 LKFP--IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEA 439 (464)
Q Consensus 399 ~~l~--~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~ 439 (464)
+.+. +++.++|.++|.++|+|+ ++++++.++++.+.+.
T Consensus 345 ~~~~~~~~~~~~l~~~i~~ll~~~---~~~~~~~~~~~~~~~~ 384 (430)
T 2iyf_A 345 RKLATEEATADLLRETALALVDDP---EVARRLRRIQAEMAQE 384 (430)
T ss_dssp EECCCC-CCHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHHH
T ss_pred EEcCCCCCCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHHhc
Confidence 9997 679999999999999997 8999999998888753
|
| >2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-38 Score=307.77 Aligned_cols=357 Identities=17% Similarity=0.160 Sum_probs=241.7
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEccCCCCCC-----------CCCCc
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEG-----------GYAQA 82 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-----------~~~~~ 82 (464)
|||++++.++.||++|+++|+++|+++||+|++++++...+.+. ..|+.++.++...... .....
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVT----GVGLPAVATTDLPIRHFITTDREGRPEAIPSD 76 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHH----HTTCCEEESCSSCHHHHHHBCTTSCBCCCCCS
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHH----hCCCEEEEeCCcchHHHHhhhcccCccccCcc
Confidence 69999999999999999999999999999999999987666666 5678888887532000 00010
Q ss_pred cCHHHHH-HH-HHHhCcHHHHHHHHHhcCCCCCccEEEeCCchhhHHHHHHHcCCccEEEecchHHHHHHHhhhhcCccc
Q 012412 83 ESIEAYL-ER-FWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLE 160 (464)
Q Consensus 83 ~~~~~~~-~~-~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~ 160 (464)
......+ .. +.......+.++.+.+.+ .+| |+||+|.+..++..+|+.+|||++.+...+.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~p-D~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~--------------- 139 (384)
T 2p6p_A 77 PVAQARFTGRWFARMAASSLPRMLDFSRA-WRP-DLIVGGTMSYVAPLLALHLGVPHARQTWDAV--------------- 139 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCC-SEEEEETTCTHHHHHHHHHTCCEEEECCSSC---------------
T ss_pred hHHHHHHHHHHHHhhHHHHHHHHHHHHhc-cCC-cEEEECcchhhHHHHHHhcCCCEEEeccCCc---------------
Confidence 0111111 21 111112223333333322 245 9999998778888999999999998653320
Q ss_pred CCCCCCceeCCCCCCCCCCCCCCccccCCCCchHHHHHHHHH-hhhccCCcEEEecchhhhhHHHHHHHHhcCCeeeecc
Q 012412 161 LPLTGNEILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQ-FENIDKADWVLCNTFYELEEEVVEWLRKTWSLRTIGP 239 (464)
Q Consensus 161 ~p~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~vgp 239 (464)
.+ . ..... ......+.+. +. .......+.+++++.+.+++. ... +...++.
T Consensus 140 ---------~~-------~---~~~~~--~~~~~~~~~~-~~g~~~~~~~~~~l~~~~~~~~~~-----~~~-~~~~~~~ 191 (384)
T 2p6p_A 140 ---------DA-------D---GIHPG--ADAELRPELS-ELGLERLPAPDLFIDICPPSLRPA-----NAA-PARMMRH 191 (384)
T ss_dssp ---------CC-------T---TTHHH--HHHHTHHHHH-HTTCSSCCCCSEEEECSCGGGSCT-----TSC-CCEECCC
T ss_pred ---------cc-------c---hhhHH--HHHHHHHHHH-HcCCCCCCCCCeEEEECCHHHCCC-----CCC-CCCceEe
Confidence 00 0 00000 0001111111 11 011111467888887766541 111 1111221
Q ss_pred cCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccC-----CHHHHHHHHHHHhhCCCeEEEEE
Q 012412 240 TIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVEL-----KAEEMEELAWGLKSSDQHFLWVV 314 (464)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~-----~~~~~~~~~~al~~~~~~~i~~~ 314 (464)
+... .+.++.+|++..+++++||+++||.... +.+.+..+++++++.+.+++|++
T Consensus 192 ~~~~--------------------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~ 251 (384)
T 2p6p_A 192 VATS--------------------RQCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDVELIVAA 251 (384)
T ss_dssp CCCC--------------------CCCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTTTCEEEEEC
T ss_pred cCCC--------------------CCCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcCCcEEEEEe
Confidence 1000 0123345776545678999999998754 45778899999999999999988
Q ss_pred cCcccCcCChhhhhhccCCCcEEEEeccChHHhhccccccceeccCChhHHHHHHHhCCcEeccCCccchhhHHHHHHhH
Q 012412 315 RESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDV 394 (464)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~ 394 (464)
++... +.+. . .++|+.+ +|+|+.++|+++++ ||||||.||++||+++|+|+|++|...||..||+++++.
T Consensus 252 g~~~~----~~l~-~--~~~~v~~-~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~~~~ 321 (384)
T 2p6p_A 252 PDTVA----EALR-A--EVPQARV-GWTPLDVVAPTCDL--LVHHAGGVSTLTGLSAGVPQLLIPKGSVLEAPARRVADY 321 (384)
T ss_dssp CHHHH----HHHH-H--HCTTSEE-ECCCHHHHGGGCSE--EEECSCTTHHHHHHHTTCCEEECCCSHHHHHHHHHHHHH
T ss_pred CCCCH----HhhC-C--CCCceEE-cCCCHHHHHhhCCE--EEeCCcHHHHHHHHHhCCCEEEccCcccchHHHHHHHHC
Confidence 75321 2222 1 5789999 99999999999999 999999999999999999999999999999999999999
Q ss_pred hcceeecc--CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Q 012412 395 WKTGLKFP--IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASL 457 (464)
Q Consensus 395 ~G~g~~l~--~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l 457 (464)
|+|+.++ +.+.++|.++|.++|.|+ +++++++++++.+++ ..+.++.++.+.+.+
T Consensus 322 -g~g~~~~~~~~~~~~l~~~i~~ll~~~---~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~~ 378 (384)
T 2p6p_A 322 -GAAIALLPGEDSTEAIADSCQELQAKD---TYARRAQDLSREISG----MPLPATVVTALEQLA 378 (384)
T ss_dssp -TSEEECCTTCCCHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHT----SCCHHHHHHHHHHHH
T ss_pred -CCeEecCcCCCCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHHh----CCCHHHHHHHHHHHh
Confidence 9999987 679999999999999997 999999999999985 344444444444333
|
| >4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-38 Score=310.68 Aligned_cols=345 Identities=15% Similarity=0.166 Sum_probs=221.5
Q ss_pred CCCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEccCCCCCC--------C--
Q 012412 9 TSCKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEG--------G-- 78 (464)
Q Consensus 9 ~~~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--------~-- 78 (464)
.+..+|||+|++.++.||++|+++|+++|+++||+|++++++...+.+. ..|+.+..++...... .
T Consensus 11 ~~~~~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~----~~G~~~~~~~~~~~~~~~~~~~~~~~~ 86 (398)
T 4fzr_A 11 PRGSHMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVT----GAGLPFAPTCPSLDMPEVLSWDREGNR 86 (398)
T ss_dssp ----CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHH----HTTCCEEEEESSCCHHHHHSBCTTSCB
T ss_pred CCCCceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHH----hCCCeeEecCCccchHhhhhhhccCcc
Confidence 3455799999999999999999999999999999999999988777777 6788888887321100 0
Q ss_pred CCCccCH----HHHHHHHHHhCcHHHHHHHHHhcCCCCCccEEEeCCchhhHHHHHHHcCCccEEEecchHHHHHHHhhh
Q 012412 79 YAQAESI----EAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHV 154 (464)
Q Consensus 79 ~~~~~~~----~~~~~~~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~ 154 (464)
....... ......+.......+.++.+.+. +++| |+||+|....++..+|+.+|||++.+.........
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~p-DlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~~~~----- 159 (398)
T 4fzr_A 87 TTMPREEKPLLEHIGRGYGRLVLRMRDEALALAE-RWKP-DLVLTETYSLTGPLVAATLGIPWIEQSIRLASPEL----- 159 (398)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCC-SEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCHH-----
T ss_pred cccccchhhHHHHHHHHHHHHHHHHHHHHHHHHH-hCCC-CEEEECccccHHHHHHHhhCCCEEEeccCCCCchh-----
Confidence 0000011 11112222222222223333222 2356 99999987788999999999999986544310000
Q ss_pred hcCcccCCCCCCceeCCCCCCCCCCCCCCccccCCCCchHHHHHHHHHhhh-----ccCCcEEEecchhhhhHHHHHHHH
Q 012412 155 KKGSLELPLTGNEILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFEN-----IDKADWVLCNTFYELEEEVVEWLR 229 (464)
Q Consensus 155 ~~~~~~~p~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~s~~~l~~~~~~~~~ 229 (464)
. ......++. ..... ....+..+....+.+....
T Consensus 160 -----------------------------~------~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 198 (398)
T 4fzr_A 160 -----------------------------I------KSAGVGELA-PELAELGLTDFPDPLLSIDVCPPSMEAQP----- 198 (398)
T ss_dssp -----------------------------H------HHHHHHHTH-HHHHTTTCSSCCCCSEEEECSCGGGC--------
T ss_pred -----------------------------h------hHHHHHHHH-HHHHHcCCCCCCCCCeEEEeCChhhCCCC-----
Confidence 0 001111111 11111 1122344444444443210
Q ss_pred hcCCeeeecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccC--------CHHHHHHHHH
Q 012412 230 KTWSLRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVEL--------KAEEMEELAW 301 (464)
Q Consensus 230 ~~~~~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~--------~~~~~~~~~~ 301 (464)
. ...+.+...... ....++.+|+...+++++||+++|+.... ..+.+..+++
T Consensus 199 ~-~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~ 258 (398)
T 4fzr_A 199 K-PGTTKMRYVPYN-------------------GRNDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQ 258 (398)
T ss_dssp --CCCEECCCCCCC-------------------CSSCCCCHHHHSCCSSCEEECC----------------CCSHHHHHH
T ss_pred C-CCCCCeeeeCCC-------------------CCCCCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHH
Confidence 0 011111100000 01123345665545778999999998632 3466888999
Q ss_pred HHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChHHhhccccccceeccCChhHHHHHHHhCCcEeccCCc
Q 012412 302 GLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQW 381 (464)
Q Consensus 302 al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~ 381 (464)
++++.+.+++|+.++...+.+.. .++|+++.+|+|+.++|++|++ ||||||.||++||+++|+|+|++|..
T Consensus 259 al~~~~~~~v~~~~~~~~~~l~~-------~~~~v~~~~~~~~~~ll~~ad~--~v~~gG~~t~~Ea~~~G~P~v~~p~~ 329 (398)
T 4fzr_A 259 ELPKLGFEVVVAVSDKLAQTLQP-------LPEGVLAAGQFPLSAIMPACDV--VVHHGGHGTTLTCLSEGVPQVSVPVI 329 (398)
T ss_dssp HGGGGTCEEEECCCC---------------CCTTEEEESCCCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCS
T ss_pred HHHhCCCEEEEEeCCcchhhhcc-------CCCcEEEeCcCCHHHHHhhCCE--EEecCCHHHHHHHHHhCCCEEecCCc
Confidence 99999999999887653222221 6899999999999999999999 99999999999999999999999999
Q ss_pred cchhhHHHHHHhHhcceeecc--CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHH
Q 012412 382 SDQSTNAKYILDVWKTGLKFP--IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKE 438 (464)
Q Consensus 382 ~DQ~~na~rl~~~~G~g~~l~--~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~ 438 (464)
.||..|++++++. |+|+.++ +++++.|.++|.++|+|+ ++++++++.++.+.+
T Consensus 330 ~~q~~~a~~~~~~-g~g~~~~~~~~~~~~l~~ai~~ll~~~---~~~~~~~~~~~~~~~ 384 (398)
T 4fzr_A 330 AEVWDSARLLHAA-GAGVEVPWEQAGVESVLAACARIRDDS---SYVGNARRLAAEMAT 384 (398)
T ss_dssp GGGHHHHHHHHHT-TSEEECC-------CHHHHHHHHHHCT---HHHHHHHHHHHHHTT
T ss_pred hhHHHHHHHHHHc-CCEEecCcccCCHHHHHHHHHHHHhCH---HHHHHHHHHHHHHHc
Confidence 9999999999999 9999998 779999999999999998 999999999998874
|
| >3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-36 Score=297.89 Aligned_cols=353 Identities=16% Similarity=0.148 Sum_probs=235.3
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEccCCCCC--------------
Q 012412 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDE-------------- 76 (464)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-------------- 76 (464)
.++|||+|++.++.||++|+++|+++|+++||+|+++++ ...+.+. ..|+.+.+++.....
T Consensus 18 ~~~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~----~~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (398)
T 3oti_A 18 GRHMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAA----AAGLEVVDVAPDYSAVKVFEQVAKDNPRF 92 (398)
T ss_dssp -CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHH----TTTCEEEESSTTCCHHHHHHHHHHHCHHH
T ss_pred hhcCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHH----hCCCeeEecCCccCHHHHhhhcccCCccc
Confidence 346899999999999999999999999999999999999 7777777 788999999843210
Q ss_pred ------CCCCCccCHHHHHHHHHHhCcHHHHHHHHHhcCCCCCccEEEeCCchhhHHHHHHHcCCccEEEecchHHHHHH
Q 012412 77 ------GGYAQAESIEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYI 150 (464)
Q Consensus 77 ------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~ 150 (464)
............+..........+.+++++. +| |+||+|....++..+|+.+|||++.+......
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----~p-DlVv~d~~~~~~~~aA~~~giP~v~~~~~~~~---- 163 (398)
T 3oti_A 93 AETVATRPAIDLEEWGVQIAAVNRPLVDGTMALVDDY----RP-DLVVYEQGATVGLLAADRAGVPAVQRNQSAWR---- 163 (398)
T ss_dssp HHTGGGSCCCSGGGGHHHHHHHHGGGHHHHHHHHHHH----CC-SEEEEETTCHHHHHHHHHHTCCEEEECCTTCC----
T ss_pred cccccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHc----CC-CEEEECchhhHHHHHHHHcCCCEEEEeccCCC----
Confidence 0011111222222222222223333443332 55 99999988888999999999999876433200
Q ss_pred HhhhhcCcccCCCCCCceeCCCCCCCCCCCCCCccccCCCCchHHHHHHHHHhhhccCCcEEEecchhhhhHHHHHHHHh
Q 012412 151 YYHVKKGSLELPLTGNEILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRK 230 (464)
Q Consensus 151 ~~~~~~~~~~~p~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~ 230 (464)
. ....... ...+...+. +..-.....+..+....+.+.. ...
T Consensus 164 --------------------------~-~~~~~~~-----~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~-----~~~ 205 (398)
T 3oti_A 164 --------------------------T-RGMHRSI-----ASFLTDLMD-KHQVSLPEPVATIESFPPSLLL-----EAE 205 (398)
T ss_dssp --------------------------C-TTHHHHH-----HTTCHHHHH-HTTCCCCCCSEEECSSCGGGGT-----TSC
T ss_pred --------------------------c-cchhhHH-----HHHHHHHHH-HcCCCCCCCCeEEEeCCHHHCC-----CCC
Confidence 0 0000000 000111111 1111112223334333333321 000
Q ss_pred cCCeeeecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccC--CHHHHHHHHHHHhhCCC
Q 012412 231 TWSLRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVEL--KAEEMEELAWGLKSSDQ 308 (464)
Q Consensus 231 ~~~~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~--~~~~~~~~~~al~~~~~ 308 (464)
...+.+... +.. .......|+...+++++||+++||.... ..+.+..+++++++.+.
T Consensus 206 -~~~~~~~~~----------~~~----------~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~ 264 (398)
T 3oti_A 206 -PEGWFMRWV----------PYG----------GGAVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGEVDA 264 (398)
T ss_dssp -CCSBCCCCC----------CCC----------CCEECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHHTSSS
T ss_pred -CCCCCcccc----------CCC----------CCcCCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHHcCCC
Confidence 000000000 000 0122334555445788999999999632 56778889999999999
Q ss_pred eEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChHHhhccccccceeccCChhHHHHHHHhCCcEeccCCccchhhHH
Q 012412 309 HFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNA 388 (464)
Q Consensus 309 ~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na 388 (464)
+++|+.++.....+.. .++|+++.+|+|+.++|++|++ ||||||.||++||+++|+|+|++|...||..||
T Consensus 265 ~~v~~~g~~~~~~l~~-------~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Eal~~G~P~v~~p~~~dq~~~a 335 (398)
T 3oti_A 265 DFVLALGDLDISPLGT-------LPRNVRAVGWTPLHTLLRTCTA--VVHHGGGGTVMTAIDAGIPQLLAPDPRDQFQHT 335 (398)
T ss_dssp EEEEECTTSCCGGGCS-------CCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCCTTCCSSCT
T ss_pred EEEEEECCcChhhhcc-------CCCcEEEEccCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEcCCCchhHHHH
Confidence 9999987753222221 6789999999999999999999 999999999999999999999999999999999
Q ss_pred --HHHHhHhcceeecc--CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 012412 389 --KYILDVWKTGLKFP--IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLA 458 (464)
Q Consensus 389 --~rl~~~~G~g~~l~--~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l~ 458 (464)
.++++. |+|+.++ +.+++.|. ++|+|+ +++++++++++.+.+ ..+.+.+.+.++++.
T Consensus 336 ~~~~~~~~-g~g~~~~~~~~~~~~l~----~ll~~~---~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~l~ 396 (398)
T 3oti_A 336 AREAVSRR-GIGLVSTSDKVDADLLR----RLIGDE---SLRTAAREVREEMVA-----LPTPAETVRRIVERI 396 (398)
T ss_dssp THHHHHHH-TSEEECCGGGCCHHHHH----HHHHCH---HHHHHHHHHHHHHHT-----SCCHHHHHHHHHHHH
T ss_pred HHHHHHHC-CCEEeeCCCCCCHHHHH----HHHcCH---HHHHHHHHHHHHHHh-----CCCHHHHHHHHHHHh
Confidence 999999 9999998 67887777 888897 999999999999884 333455555555553
|
| >3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-35 Score=287.46 Aligned_cols=354 Identities=15% Similarity=0.133 Sum_probs=234.5
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEc-cCCCCCC-----CCC------
Q 012412 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAI-SDGYDEG-----GYA------ 80 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~-----~~~------ 80 (464)
.|||+|++.++.||++|++.|+++|+++||+|++++++...+.+. ..|+.+..+ +...... ...
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAH----GAGLTTAGIRGNDRTGDTGGTTQLRFPNPAF 76 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHHH----HBTCEEEEC--------------CCSCCGGG
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHHH----hCCCceeeecCCccchhhhhhhccccccccc
Confidence 379999999999999999999999999999999999987777676 678888888 4221100 000
Q ss_pred ---CccCHHHHHHHHHHhC----cHHHHHHHHHhcCCCCCccEEEeCCchhhHHHHHHHcCCccEEEecchHHHHHHHhh
Q 012412 81 ---QAESIEAYLERFWQIG----PQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYH 153 (464)
Q Consensus 81 ---~~~~~~~~~~~~~~~~----~~~l~~~~~~l~~~~~p~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~ 153 (464)
........+....... ...+.++.+.+. +++| |+||+|....++..+|+.+|||++.+.......
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~~P-D~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~~~------ 148 (391)
T 3tsa_A 77 GQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAE-AWRP-SVLLVDVCALIGRVLGGLLDLPVVLHRWGVDPT------ 148 (391)
T ss_dssp GCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCC-SEEEEETTCHHHHHHHHHTTCCEEEECCSCCCT------
T ss_pred ccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHH-hcCC-CEEEeCcchhHHHHHHHHhCCCEEEEecCCccc------
Confidence 0011111121111111 000223322222 2356 999999877888999999999998865432000
Q ss_pred hhcCcccCCCCCCceeCCCCCCCCCCCCCCccccCCCCchHHHHHHHHHhhhc-----cCCcEEEecchhhhhHHHHHHH
Q 012412 154 VKKGSLELPLTGNEILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENI-----DKADWVLCNTFYELEEEVVEWL 228 (464)
Q Consensus 154 ~~~~~~~~p~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~s~~~l~~~~~~~~ 228 (464)
... .......++. +....+ ...+.++....++++. .
T Consensus 149 ----------------------------~~~-----~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 189 (391)
T 3tsa_A 149 ----------------------------AGP-----FSDRAHELLD-PVCRHHGLTGLPTPELILDPCPPSLQA-----S 189 (391)
T ss_dssp ----------------------------TTH-----HHHHHHHHHH-HHHHHTTSSSSCCCSEEEECSCGGGSC-----T
T ss_pred ----------------------------ccc-----ccchHHHHHH-HHHHHcCCCCCCCCceEEEecChhhcC-----C
Confidence 000 0011222222 222111 1124444444443332 0
Q ss_pred HhcC--CeeeecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEEeccccc--CC-HHHHHHHHHHH
Q 012412 229 RKTW--SLRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVE--LK-AEEMEELAWGL 303 (464)
Q Consensus 229 ~~~~--~~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~--~~-~~~~~~~~~al 303 (464)
.... ++.++ |.. .......|+...+++++|++++||... .. .+.+..++++
T Consensus 190 ~~~~~~~~~~~-p~~----------------------~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~- 245 (391)
T 3tsa_A 190 DAPQGAPVQYV-PYN----------------------GSGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA- 245 (391)
T ss_dssp TSCCCEECCCC-CCC----------------------CCEECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH-
T ss_pred CCCccCCeeee-cCC----------------------CCcCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh-
Confidence 0000 01111 000 012223466554577899999999853 23 7888889998
Q ss_pred hhC-CCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChHHhhccccccceeccCChhHHHHHHHhCCcEeccCCcc
Q 012412 304 KSS-DQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWS 382 (464)
Q Consensus 304 ~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~ 382 (464)
++. +.+++|+.++...+.+.. .++|+++.+|+|+.++|++||+ ||||||.||++||+++|+|+|++|...
T Consensus 246 ~~~p~~~~v~~~~~~~~~~l~~-------~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~ 316 (391)
T 3tsa_A 246 TELPGVEAVIAVPPEHRALLTD-------LPDNARIAESVPLNLFLRTCEL--VICAGGSGTAFTATRLGIPQLVLPQYF 316 (391)
T ss_dssp HTSTTEEEEEECCGGGGGGCTT-------CCTTEEECCSCCGGGTGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCST
T ss_pred ccCCCeEEEEEECCcchhhccc-------CCCCEEEeccCCHHHHHhhCCE--EEeCCCHHHHHHHHHhCCCEEecCCcc
Confidence 887 788888887653332321 6789999999999999999999 999999999999999999999999999
Q ss_pred chhhHHHHHHhHhcceeeccC----cCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 012412 383 DQSTNAKYILDVWKTGLKFPI----VKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLA 458 (464)
Q Consensus 383 DQ~~na~rl~~~~G~g~~l~~----~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l~ 458 (464)
||..|+.++++. |+|..+.. .+++.|.+++.++|+|+ +++++++++++.+.+ ..+ .+.+.+.++++.
T Consensus 317 ~q~~~a~~~~~~-g~g~~~~~~~~~~~~~~l~~ai~~ll~~~---~~~~~~~~~~~~~~~----~~~-~~~~~~~i~~~~ 387 (391)
T 3tsa_A 317 DQFDYARNLAAA-GAGICLPDEQAQSDHEQFTDSIATVLGDT---GFAAAAIKLSDEITA----MPH-PAALVRTLENTA 387 (391)
T ss_dssp THHHHHHHHHHT-TSEEECCSHHHHTCHHHHHHHHHHHHTCT---HHHHHHHHHHHHHHT----SCC-HHHHHHHHHHC-
T ss_pred cHHHHHHHHHHc-CCEEecCcccccCCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHHc----CCC-HHHHHHHHHHHH
Confidence 999999999999 99999975 88999999999999998 999999999988874 343 344555555544
Q ss_pred h
Q 012412 459 C 459 (464)
Q Consensus 459 ~ 459 (464)
.
T Consensus 388 ~ 388 (391)
T 3tsa_A 388 A 388 (391)
T ss_dssp -
T ss_pred h
Confidence 3
|
| >3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-33 Score=277.90 Aligned_cols=359 Identities=18% Similarity=0.153 Sum_probs=240.6
Q ss_pred CCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEccCCC------------CCC
Q 012412 10 SCKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGY------------DEG 77 (464)
Q Consensus 10 ~~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~------------~~~ 77 (464)
+..+|||+|++.++.||++|+++|+++|+++||+|++++++...+.+. ..|+.+..++... ...
T Consensus 17 ~~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (412)
T 3otg_A 17 EGRHMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLR----KLGFEPVATGMPVFDGFLAALRIRFDTD 92 (412)
T ss_dssp -CCSCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHH----HTTCEEEECCCCHHHHHHHHHHHHHSCS
T ss_pred ccceeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHHH----hcCCceeecCcccccchhhhhhhhhccc
Confidence 345799999999999999999999999999999999999987666666 6689999887410 000
Q ss_pred CC------CCccCHHHHHHHH-HHhCcHHHHHHHHHhcCCCCCccEEEeCCchhhHHHHHHHcCCccEEEecchHHHHHH
Q 012412 78 GY------AQAESIEAYLERF-WQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYI 150 (464)
Q Consensus 78 ~~------~~~~~~~~~~~~~-~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~ 150 (464)
.. .........+..+ .......+.+++++. +| |+||+|....++..+|+.+|||++.+......
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----~p-DvVv~~~~~~~~~~aa~~~giP~v~~~~~~~~---- 163 (412)
T 3otg_A 93 SPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIERL----RP-DLVVQEISNYGAGLAALKAGIPTICHGVGRDT---- 163 (412)
T ss_dssp CCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHHH----CC-SEEEEETTCHHHHHHHHHHTCCEEEECCSCCC----
T ss_pred CCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHhc----CC-CEEEECchhhHHHHHHHHcCCCEEEecccccC----
Confidence 00 0011111111111 111112233333332 55 99999987777889999999999886443200
Q ss_pred HhhhhcCcccCCCCCCceeCCCCCCCCCCCCCCccccCCCCchHHHHHHHHHhhh----------ccCCcEEEecchhhh
Q 012412 151 YYHVKKGSLELPLTGNEILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFEN----------IDKADWVLCNTFYEL 220 (464)
Q Consensus 151 ~~~~~~~~~~~p~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~l~~s~~~l 220 (464)
.++ . ...+.+++. +.... ....+.+++.+...+
T Consensus 164 -------------------~~~-----------~------~~~~~~~~~-~~~~~~g~~~~~~~~~~~~d~~i~~~~~~~ 206 (412)
T 3otg_A 164 -------------------PDD-----------L------TRSIEEEVR-GLAQRLGLDLPPGRIDGFGNPFIDIFPPSL 206 (412)
T ss_dssp -------------------CSH-----------H------HHHHHHHHH-HHHHHTTCCCCSSCCGGGGCCEEECSCGGG
T ss_pred -------------------chh-----------h------hHHHHHHHH-HHHHHcCCCCCcccccCCCCeEEeeCCHHh
Confidence 000 0 011111111 11111 123445666665555
Q ss_pred hHHHHHHHHhcCCeeeecccCCCccccccccCcccccccccccchhHHHHH-hhcCCCCceEEEEecccccCCHHHHHHH
Q 012412 221 EEEVVEWLRKTWSLRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKW-LNDRAKESVVYVSYGSFVELKAEEMEEL 299 (464)
Q Consensus 221 ~~~~~~~~~~~~~~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~v~vs~Gs~~~~~~~~~~~~ 299 (464)
+...... ......+.+.... ......+| ....+++++|++++|+......+.+..+
T Consensus 207 ~~~~~~~---~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~ 263 (412)
T 3otg_A 207 QEPEFRA---RPRRHELRPVPFA--------------------EQGDLPAWLSSRDTARPLVYLTLGTSSGGTVEVLRAA 263 (412)
T ss_dssp SCHHHHT---CTTEEECCCCCCC--------------------CCCCCCGGGGGSCTTSCEEEEECTTTTCSCHHHHHHH
T ss_pred cCCcccC---CCCcceeeccCCC--------------------CCCCCCCccccccCCCCEEEEEcCCCCcCcHHHHHHH
Confidence 4311100 0011111111110 01112234 2222567899999999976678899999
Q ss_pred HHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChHHhhccccccceeccCChhHHHHHHHhCCcEeccC
Q 012412 300 AWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMP 379 (464)
Q Consensus 300 ~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P 379 (464)
++++++.+.+++|++++.. ..+.+.+ .++|+.+.+|+|+.++|+.+|+ ||+|||.+|++||+++|+|+|++|
T Consensus 264 ~~~l~~~~~~~~~~~g~~~---~~~~l~~---~~~~v~~~~~~~~~~~l~~ad~--~v~~~g~~t~~Ea~a~G~P~v~~p 335 (412)
T 3otg_A 264 IDGLAGLDADVLVASGPSL---DVSGLGE---VPANVRLESWVPQAALLPHVDL--VVHHGGSGTTLGALGAGVPQLSFP 335 (412)
T ss_dssp HHHHHTSSSEEEEECCSSC---CCTTCCC---CCTTEEEESCCCHHHHGGGCSE--EEESCCHHHHHHHHHHTCCEEECC
T ss_pred HHHHHcCCCEEEEEECCCC---Chhhhcc---CCCcEEEeCCCCHHHHHhcCcE--EEECCchHHHHHHHHhCCCEEecC
Confidence 9999988999999887753 1222221 6789999999999999999999 999999999999999999999999
Q ss_pred CccchhhHHHHHHhHhcceeecc--CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Q 012412 380 QWSDQSTNAKYILDVWKTGLKFP--IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASL 457 (464)
Q Consensus 380 ~~~DQ~~na~rl~~~~G~g~~l~--~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l 457 (464)
...||..|+.++++. |+|..++ ++++++|.+++.++|+|+ ++++++.+.++.+.+ ..+ .+.+.+.++++
T Consensus 336 ~~~~q~~~~~~v~~~-g~g~~~~~~~~~~~~l~~ai~~ll~~~---~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~l 406 (412)
T 3otg_A 336 WAGDSFANAQAVAQA-GAGDHLLPDNISPDSVSGAAKRLLAEE---SYRAGARAVAAEIAA----MPG-PDEVVRLLPGF 406 (412)
T ss_dssp CSTTHHHHHHHHHHH-TSEEECCGGGCCHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHH----SCC-HHHHHTTHHHH
T ss_pred CchhHHHHHHHHHHc-CCEEecCcccCCHHHHHHHHHHHHhCH---HHHHHHHHHHHHHhc----CCC-HHHHHHHHHHH
Confidence 999999999999999 9999998 679999999999999997 899999988888875 343 34444444444
Q ss_pred H
Q 012412 458 A 458 (464)
Q Consensus 458 ~ 458 (464)
.
T Consensus 407 ~ 407 (412)
T 3otg_A 407 A 407 (412)
T ss_dssp H
T ss_pred h
Confidence 3
|
| >3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.98 E-value=1.3e-30 Score=252.32 Aligned_cols=305 Identities=15% Similarity=0.149 Sum_probs=195.9
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCccccc--ccccCCCCCCceEEEccCC-CCCCC-CCCccCHHHHHH
Q 012412 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYK--SLHRDSSSSSIPLEAISDG-YDEGG-YAQAESIEAYLE 90 (464)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~-~~~~~-~~~~~~~~~~~~ 90 (464)
||++...|+.||++|+++||++|+++||+|+|++++...+ .+. ..|+.++.++.. +.... ......+...+.
T Consensus 4 ~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~----~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 79 (365)
T 3s2u_A 4 NVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVP----KAGLPLHLIQVSGLRGKGLKSLVKAPLELLK 79 (365)
T ss_dssp EEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTG----GGTCCEEECC--------------CHHHHHH
T ss_pred cEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhh----hcCCcEEEEECCCcCCCCHHHHHHHHHHHHH
Confidence 8999888888999999999999999999999999865432 344 567888888732 11100 111112222222
Q ss_pred HHHHhCcHHHHHHHHHhcCCCCCccEEEeCCch--hhHHHHHHHcCCccEEEecchHHHHHHHhhhhcCcccCCCCCCce
Q 012412 91 RFWQIGPQTLTELVEKMNGSDSPVDCIVYDSIL--LWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNEI 168 (464)
Q Consensus 91 ~~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~--~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 168 (464)
.+. ....++++. +| |+||++..+ ..+..+|+.+|||+++...+.
T Consensus 80 ~~~-----~~~~~l~~~----~P-DvVi~~g~~~s~p~~laA~~~~iP~vihe~n~------------------------ 125 (365)
T 3s2u_A 80 SLF-----QALRVIRQL----RP-VCVLGLGGYVTGPGGLAARLNGVPLVIHEQNA------------------------ 125 (365)
T ss_dssp HHH-----HHHHHHHHH----CC-SEEEECSSSTHHHHHHHHHHTTCCEEEEECSS------------------------
T ss_pred HHH-----HHHHHHHhc----CC-CEEEEcCCcchHHHHHHHHHcCCCEEEEecch------------------------
Confidence 221 133444443 56 999998655 335678999999999754332
Q ss_pred eCCCCCCCCCCCCCCccccCCCCchHHHHHHHHHhhhccCCcEEEecchhhhhHHHHHHHHhcCCeeeecccCCCccccc
Q 012412 169 LLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTWSLRTIGPTIPSFYLDK 248 (464)
Q Consensus 169 ~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~vgp~~~~~~~~~ 248 (464)
+||. .++++. +.++.++. ++++..+ ...+..++|+.+......
T Consensus 126 -~~G~--------------------~nr~l~-------~~a~~v~~-~~~~~~~-------~~~k~~~~g~pvr~~~~~- 168 (365)
T 3s2u_A 126 -VAGT--------------------ANRSLA-------PIARRVCE-AFPDTFP-------ASDKRLTTGNPVRGELFL- 168 (365)
T ss_dssp -SCCH--------------------HHHHHG-------GGCSEEEE-SSTTSSC-------C---CEECCCCCCGGGCC-
T ss_pred -hhhh--------------------HHHhhc-------cccceeee-ccccccc-------CcCcEEEECCCCchhhcc-
Confidence 2221 223322 22334333 3322111 111355666544331110
Q ss_pred cccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhC----CCeEEEEEcCcccCcCCh
Q 012412 249 QIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSS----DQHFLWVVRESEQAKLPK 324 (464)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~----~~~~i~~~~~~~~~~~~~ 324 (464)
. . .......+++++|++..||... ....+.+.++++.+ +..++++++....+...+
T Consensus 169 --~--------------~--~~~~~~~~~~~~ilv~gGs~g~--~~~~~~~~~al~~l~~~~~~~vi~~~G~~~~~~~~~ 228 (365)
T 3s2u_A 169 --D--------------A--HARAPLTGRRVNLLVLGGSLGA--EPLNKLLPEALAQVPLEIRPAIRHQAGRQHAEITAE 228 (365)
T ss_dssp --C--------------T--TSSCCCTTSCCEEEECCTTTTC--SHHHHHHHHHHHTSCTTTCCEEEEECCTTTHHHHHH
T ss_pred --c--------------h--hhhcccCCCCcEEEEECCcCCc--cccchhhHHHHHhcccccceEEEEecCccccccccc
Confidence 0 0 0001112456789999998763 23444556666554 346777776543332322
Q ss_pred hhhhhccCCCcEEEEeccChH-HhhccccccceeccCChhHHHHHHHhCCcEeccCCc----cchhhHHHHHHhHhccee
Q 012412 325 KFSDETLTSHKSLVVSWCPQL-EVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQW----SDQSTNAKYILDVWKTGL 399 (464)
Q Consensus 325 ~~~~~~~~~~nv~~~~~~p~~-~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~----~DQ~~na~rl~~~~G~g~ 399 (464)
.+.+ .+.|+.+.+|+++. ++|+.+|+ +|||+|.+|++|++++|+|+|++|.. .+|..||+.+++. |+|.
T Consensus 229 ~~~~---~~~~~~v~~f~~dm~~~l~~aDl--vI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~~-G~a~ 302 (365)
T 3s2u_A 229 RYRT---VAVEADVAPFISDMAAAYAWADL--VICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRS-GAGR 302 (365)
T ss_dssp HHHH---TTCCCEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHTT-TSEE
T ss_pred eecc---cccccccccchhhhhhhhccceE--EEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHHC-CCEE
Confidence 2222 56789999999987 89999999 99999999999999999999999874 5899999999999 9999
Q ss_pred ecc--CcCHHHHHHHHHHHhcCC
Q 012412 400 KFP--IVKRDAIADCISEILEGE 420 (464)
Q Consensus 400 ~l~--~~~~~~l~~~i~~ll~~~ 420 (464)
.++ +++++.|.++|.++|+|+
T Consensus 303 ~l~~~~~~~~~L~~~i~~ll~d~ 325 (365)
T 3s2u_A 303 LLPQKSTGAAELAAQLSEVLMHP 325 (365)
T ss_dssp ECCTTTCCHHHHHHHHHHHHHCT
T ss_pred EeecCCCCHHHHHHHHHHHHCCH
Confidence 998 889999999999999997
|
| >2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.5e-27 Score=203.15 Aligned_cols=159 Identities=21% Similarity=0.405 Sum_probs=138.4
Q ss_pred chhHHHHHhhcCCCCceEEEEecccc-cCCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEecc
Q 012412 264 STEACMKWLNDRAKESVVYVSYGSFV-ELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWC 342 (464)
Q Consensus 264 ~~~~~~~~l~~~~~~~~v~vs~Gs~~-~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~ 342 (464)
+++++.+|++..+++++||+++||.. ..+.+.+..+++++++.+.+++|++++... +. .++|+++.+|+
T Consensus 7 l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~----~~------~~~~v~~~~~~ 76 (170)
T 2o6l_A 7 LPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNKP----DT------LGLNTRLYKWI 76 (170)
T ss_dssp CCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSCC----TT------CCTTEEEESSC
T ss_pred CCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcCc----cc------CCCcEEEecCC
Confidence 46889999987667789999999986 457889999999999989999999876421 11 56899999999
Q ss_pred ChHHhh--ccccccceeccCChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeecc--CcCHHHHHHHHHHHhc
Q 012412 343 PQLEVL--AHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP--IVKRDAIADCISEILE 418 (464)
Q Consensus 343 p~~~ll--~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~--~~~~~~l~~~i~~ll~ 418 (464)
|+.+++ +.+++ ||||||.+|++||+++|+|+|++|...||..||+++++. |+|+.++ +++.+.|.++|.+++.
T Consensus 77 ~~~~~l~~~~ad~--~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~-g~g~~~~~~~~~~~~l~~~i~~ll~ 153 (170)
T 2o6l_A 77 PQNDLLGHPKTRA--FITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKAR-GAAVRVDFNTMSSTDLLNALKRVIN 153 (170)
T ss_dssp CHHHHHTSTTEEE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTT-TSEEECCTTTCCHHHHHHHHHHHHH
T ss_pred CHHHHhcCCCcCE--EEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHHc-CCeEEeccccCCHHHHHHHHHHHHc
Confidence 999999 77887 999999999999999999999999999999999999999 9999998 7899999999999999
Q ss_pred CCchHHHHHHHHHHHHHHHH
Q 012412 419 GERGKELRRNAGKWRKLAKE 438 (464)
Q Consensus 419 ~~~~~~~~~~a~~l~~~~~~ 438 (464)
|+ +|+++++++++.+++
T Consensus 154 ~~---~~~~~a~~~~~~~~~ 170 (170)
T 2o6l_A 154 DP---SYKENVMKLSRIQHD 170 (170)
T ss_dssp CH---HHHHHHHHHC-----
T ss_pred CH---HHHHHHHHHHHHhhC
Confidence 97 899999999998873
|
| >1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=9.2e-21 Score=183.52 Aligned_cols=312 Identities=14% Similarity=0.061 Sum_probs=191.8
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccc--cccccCCCCCCceEEEccCCCCCCCCCCccCHHHHHHH
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFY--KSLHRDSSSSSIPLEAISDGYDEGGYAQAESIEAYLER 91 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 91 (464)
|||++++.+..||..+++.|+++|.++||+|++++..... +.+. ..|+.++.++..... . ......+..
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~----~~g~~~~~~~~~~~~----~-~~~~~~~~~ 77 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVP----KHGIEIDFIRISGLR----G-KGIKALIAA 77 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGG----GGTCEEEECCCCCCT----T-CCHHHHHTC
T ss_pred cEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhcc----ccCCceEEecCCccC----c-CccHHHHHH
Confidence 7999998877799999999999999999999999986532 2233 347777777632111 1 111111111
Q ss_pred HHH--hCcHHHHHHHHHhcCCCCCccEEEeCCch--hhHHHHHHHcCCccEEEecchHHHHHHHhhhhcCcccCCCCCCc
Q 012412 92 FWQ--IGPQTLTELVEKMNGSDSPVDCIVYDSIL--LWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNE 167 (464)
Q Consensus 92 ~~~--~~~~~l~~~~~~l~~~~~p~DlVI~D~~~--~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 167 (464)
... .....+..++++. +| |+|+++... ..+..+++..|+|+++.....
T Consensus 78 ~~~~~~~~~~l~~~l~~~----~p-Dvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~----------------------- 129 (364)
T 1f0k_A 78 PLRIFNAWRQARAIMKAY----KP-DVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNG----------------------- 129 (364)
T ss_dssp HHHHHHHHHHHHHHHHHH----CC-SEEEECSSTTHHHHHHHHHHTTCCEEEEECSS-----------------------
T ss_pred HHHHHHHHHHHHHHHHhc----CC-CEEEEeCCcCchHHHHHHHHcCCCEEEEecCC-----------------------
Confidence 100 0111233333332 45 999998543 346678889999988643221
Q ss_pred eeCCCCCCCCCCCCCCccccCCCCchHHHHHHHHHhhhccCCcEEEecchhhhhHHHHHHHHhcCCeeeecccCCCcccc
Q 012412 168 ILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTWSLRTIGPTIPSFYLD 247 (464)
Q Consensus 168 ~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~vgp~~~~~~~~ 247 (464)
++ .....++ ....+.+++.+... + ++...||.-+....
T Consensus 130 --~~--------------------~~~~~~~-------~~~~d~v~~~~~~~--------~---~~~~~i~n~v~~~~-- 167 (364)
T 1f0k_A 130 --IA--------------------GLTNKWL-------AKIATKVMQAFPGA--------F---PNAEVVGNPVRTDV-- 167 (364)
T ss_dssp --SC--------------------CHHHHHH-------TTTCSEEEESSTTS--------S---SSCEECCCCCCHHH--
T ss_pred --CC--------------------cHHHHHH-------HHhCCEEEecChhh--------c---CCceEeCCccchhh--
Confidence 00 0011111 13455666654321 1 13444443221100
Q ss_pred ccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhC--CCeEEEEEcCcccCcCChh
Q 012412 248 KQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSS--DQHFLWVVRESEQAKLPKK 325 (464)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~~ 325 (464)
+.+. . ..+.+...+++++|++..|+.. ..+....++++++.+ +.++++.+|....+.+.+.
T Consensus 168 -------------~~~~-~-~~~~~~~~~~~~~il~~~g~~~--~~k~~~~li~a~~~l~~~~~~l~i~G~~~~~~l~~~ 230 (364)
T 1f0k_A 168 -------------LALP-L-PQQRLAGREGPVRVLVVGGSQG--ARILNQTMPQVAAKLGDSVTIWHQSGKGSQQSVEQA 230 (364)
T ss_dssp -------------HTSC-C-HHHHHTTCCSSEEEEEECTTTC--CHHHHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHH
T ss_pred -------------cccc-h-hhhhcccCCCCcEEEEEcCchH--hHHHHHHHHHHHHHhcCCcEEEEEcCCchHHHHHHH
Confidence 0000 1 1112222234567888888875 345555566666554 4566666665432212111
Q ss_pred hhhhccCCCcEEEEeccCh-HHhhccccccceeccCChhHHHHHHHhCCcEeccCCc---cchhhHHHHHHhHhcceeec
Q 012412 326 FSDETLTSHKSLVVSWCPQ-LEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQW---SDQSTNAKYILDVWKTGLKF 401 (464)
Q Consensus 326 ~~~~~~~~~nv~~~~~~p~-~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~---~DQ~~na~rl~~~~G~g~~l 401 (464)
. +.+ ..+||.+.+|+++ ..++..+|+ +|+++|.+++.||+++|+|+|+.|.. .||..|+..+.+. |.|..+
T Consensus 231 ~-~~~-~~~~v~~~g~~~~~~~~~~~ad~--~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~-g~g~~~ 305 (364)
T 1f0k_A 231 Y-AEA-GQPQHKVTEFIDDMAAAYAWADV--VVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKA-GAAKII 305 (364)
T ss_dssp H-HHT-TCTTSEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHT-TSEEEC
T ss_pred H-hhc-CCCceEEecchhhHHHHHHhCCE--EEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhC-CcEEEe
Confidence 1 111 1258999999954 599999999 99999999999999999999999987 7999999999999 999988
Q ss_pred c--CcCHHHHHHHHHHHhcCCchHHHHHHHHH
Q 012412 402 P--IVKRDAIADCISEILEGERGKELRRNAGK 431 (464)
Q Consensus 402 ~--~~~~~~l~~~i~~ll~~~~~~~~~~~a~~ 431 (464)
+ +++.++|.++|.++ |+ +.+++..+
T Consensus 306 ~~~d~~~~~la~~i~~l--~~---~~~~~~~~ 332 (364)
T 1f0k_A 306 EQPQLSVDAVANTLAGW--SR---ETLLTMAE 332 (364)
T ss_dssp CGGGCCHHHHHHHHHTC--CH---HHHHHHHH
T ss_pred ccccCCHHHHHHHHHhc--CH---HHHHHHHH
Confidence 8 56799999999999 64 44444333
|
| >3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=3.4e-17 Score=150.53 Aligned_cols=117 Identities=12% Similarity=0.090 Sum_probs=91.9
Q ss_pred CCceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChH-Hhhccccccc
Q 012412 277 KESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQL-EVLAHEATGC 355 (464)
Q Consensus 277 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~-~ll~~~~~~~ 355 (464)
+.+.|+|++|.... ......+++++.+.. ++.++++... ...+++.+......|+.+.+|++++ +++..+|+
T Consensus 156 ~~~~ILv~~GG~d~--~~l~~~vl~~L~~~~-~i~vv~G~~~--~~~~~l~~~~~~~~~v~v~~~~~~m~~~m~~aDl-- 228 (282)
T 3hbm_A 156 KKYDFFICMGGTDI--KNLSLQIASELPKTK-IISIATSSSN--PNLKKLQKFAKLHNNIRLFIDHENIAKLMNESNK-- 228 (282)
T ss_dssp CCEEEEEECCSCCT--TCHHHHHHHHSCTTS-CEEEEECTTC--TTHHHHHHHHHTCSSEEEEESCSCHHHHHHTEEE--
T ss_pred cCCeEEEEECCCch--hhHHHHHHHHhhcCC-CEEEEECCCc--hHHHHHHHHHhhCCCEEEEeCHHHHHHHHHHCCE--
Confidence 45689999997642 235667778877654 5666666542 2334443322133599999999988 89999999
Q ss_pred eeccCChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeecc
Q 012412 356 FVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP 402 (464)
Q Consensus 356 vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~ 402 (464)
+|++|| +|++|+++.|+|++++|...+|..||+.+++. |++..+.
T Consensus 229 vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~~-G~~~~~~ 273 (282)
T 3hbm_A 229 LIISAS-SLVNEALLLKANFKAICYVKNQESTATWLAKK-GYEVEYK 273 (282)
T ss_dssp EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHHHT-TCEEECG
T ss_pred EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHC-CCEEEcc
Confidence 999999 89999999999999999999999999999999 9999886
|
| >2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A | Back alignment and structure |
|---|
Probab=99.67 E-value=1.6e-16 Score=139.97 Aligned_cols=133 Identities=11% Similarity=0.146 Sum_probs=99.8
Q ss_pred CCCceEEEEecccccCCHHHHHHH-----HHHHhhCC-CeEEEEEcCcccCcCChhhhhhc-------------------
Q 012412 276 AKESVVYVSYGSFVELKAEEMEEL-----AWGLKSSD-QHFLWVVRESEQAKLPKKFSDET------------------- 330 (464)
Q Consensus 276 ~~~~~v~vs~Gs~~~~~~~~~~~~-----~~al~~~~-~~~i~~~~~~~~~~~~~~~~~~~------------------- 330 (464)
+++++|||+.||... -.+.+..+ +++|.+.+ .++++++|........ .+.+..
T Consensus 26 ~~~~~VlVtgGS~~~-~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~~~~~-~~~~~~~~~~~~~l~p~~~~~~~~~ 103 (224)
T 2jzc_A 26 IEEKALFVTCGATVP-FPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSSEFE-HLVQERGGQRESQKIPIDQFGCGDT 103 (224)
T ss_dssp CCSCCEEEECCSCCS-CHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSCCCCC-SHHHHHTCEECSCCCSSCTTCTTCS
T ss_pred CCCCEEEEEcCCchH-HHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCchhhHH-HHHHhhhcccccccccccccccccc
Confidence 467899999999742 24444444 47888777 7899999876431111 110000
Q ss_pred -------cCCCcEEEEeccChH-Hhhc-cccccceeccCChhHHHHHHHhCCcEeccCCc----cchhhHHHHHHhHhcc
Q 012412 331 -------LTSHKSLVVSWCPQL-EVLA-HEATGCFVTHCGWNSTMEALSLGVPMVAMPQW----SDQSTNAKYILDVWKT 397 (464)
Q Consensus 331 -------~~~~nv~~~~~~p~~-~ll~-~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~----~DQ~~na~rl~~~~G~ 397 (464)
...-++.+.+|+++. ++|+ .+|+ ||||||.||++|++++|+|+|++|.. .||..||+++++. |+
T Consensus 104 ~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~~-G~ 180 (224)
T 2jzc_A 104 ARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVEL-GY 180 (224)
T ss_dssp CEEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHHH-SC
T ss_pred ccccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHHC-CC
Confidence 001245566888877 8999 9999 99999999999999999999999974 4799999999999 99
Q ss_pred eeeccCcCHHHHHHHHHHH
Q 012412 398 GLKFPIVKRDAIADCISEI 416 (464)
Q Consensus 398 g~~l~~~~~~~l~~~i~~l 416 (464)
++.+ +++.|.++|.++
T Consensus 181 ~~~~---~~~~L~~~i~~l 196 (224)
T 2jzc_A 181 VWSC---APTETGLIAGLR 196 (224)
T ss_dssp CCEE---CSCTTTHHHHHH
T ss_pred EEEc---CHHHHHHHHHHH
Confidence 9876 678888888887
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=5.8e-14 Score=139.12 Aligned_cols=384 Identities=13% Similarity=0.083 Sum_probs=197.1
Q ss_pred CCCCCCCcEEEEEcC-----------CCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEccCCCC
Q 012412 7 KPTSCKLAHCLVLTY-----------PGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYD 75 (464)
Q Consensus 7 ~~~~~~~~~il~~~~-----------~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 75 (464)
.+..+++|||++++. ...|+-..+..|++.|.++||+|++++...............++.++.++....
T Consensus 14 ~~~~~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~v~v~~~~~~~~ 93 (438)
T 3c48_A 14 LVPRGSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIVRVAENLRVINIAAGPY 93 (438)
T ss_dssp -----CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCSEEEEETTEEEEEECCSCS
T ss_pred cccCcchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCcccccccCCeEEEEecCCCc
Confidence 345567899999885 235778899999999999999999999754321100000135677777763221
Q ss_pred CCCCCCccCHHHHHHHHHHhCcHHHHHHHHH-hcCCCCCccEEEeCCch--hhHHHHHHHcCCccEEEecchHHHHHHHh
Q 012412 76 EGGYAQAESIEAYLERFWQIGPQTLTELVEK-MNGSDSPVDCIVYDSIL--LWALDVAKKFGLLGAPFLTQSCAVDYIYY 152 (464)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-l~~~~~p~DlVI~D~~~--~~~~~~A~~~giP~v~~~~~~~~~~~~~~ 152 (464)
. ... .......+..+. ..+++. +....+ +|+|++.... ..+..+++..++|+|..........
T Consensus 94 ~-~~~-~~~~~~~~~~~~-------~~~~~~~~~~~~~-~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~---- 159 (438)
T 3c48_A 94 E-GLS-KEELPTQLAAFT-------GGMLSFTRREKVT-YDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAAVK---- 159 (438)
T ss_dssp S-SCC-GGGGGGGHHHHH-------HHHHHHHHHHTCC-CSEEEEEHHHHHHHHHHHHHHHTCCEEEECSSCHHHH----
T ss_pred c-ccc-hhHHHHHHHHHH-------HHHHHHHHhccCC-CCEEEeCCccHHHHHHHHHHHcCCCEEEEecCCcccc----
Confidence 1 111 111111111111 112222 111113 5999987543 2345567889999987655542211
Q ss_pred hhhcCcccCCCCCCceeCCCCCCCCCCCCCCccccCCCCchHHHHHHHHHhhhccCCcEEEecchhhhhHHHHHHHHh-c
Q 012412 153 HVKKGSLELPLTGNEILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRK-T 231 (464)
Q Consensus 153 ~~~~~~~~~p~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~-~ 231 (464)
...+ .... .. .......+. ...+..++.+++.|....+. ....+.- .
T Consensus 160 -----------------~~~~---~~~~---~~-----~~~~~~~~~---~~~~~~~d~ii~~s~~~~~~-~~~~~g~~~ 207 (438)
T 3c48_A 160 -----------------NSYR---DDSD---TP-----ESEARRICE---QQLVDNADVLAVNTQEEMQD-LMHHYDADP 207 (438)
T ss_dssp -----------------SCC-------C---CH-----HHHHHHHHH---HHHHHHCSEEEESSHHHHHH-HHHHHCCCG
T ss_pred -----------------cccc---cccC---Cc-----chHHHHHHH---HHHHhcCCEEEEcCHHHHHH-HHHHhCCCh
Confidence 0000 0000 00 000111111 12235678888888664443 2121210 0
Q ss_pred CCeeeecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEEeccccc-CCHHHHHHHHHHH-hhC---
Q 012412 232 WSLRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVE-LKAEEMEELAWGL-KSS--- 306 (464)
Q Consensus 232 ~~~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~-~~~~~~~~~~~al-~~~--- 306 (464)
.++..|..-+.... .... .....+...+.++. +.+..+++..|+... -..+.+-..+..+ ++.
T Consensus 208 ~k~~vi~ngvd~~~----~~~~-------~~~~~~~~r~~~~~-~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~p~~ 275 (438)
T 3c48_A 208 DRISVVSPGADVEL----YSPG-------NDRATERSRRELGI-PLHTKVVAFVGRLQPFKGPQVLIKAVAALFDRDPDR 275 (438)
T ss_dssp GGEEECCCCCCTTT----SCCC-----------CHHHHHHTTC-CSSSEEEEEESCBSGGGCHHHHHHHHHHHHHHCTTC
T ss_pred hheEEecCCccccc----cCCc-------ccchhhhhHHhcCC-CCCCcEEEEEeeecccCCHHHHHHHHHHHHhhCCCc
Confidence 12333332221100 0000 00001123333332 234467788888762 2333333333333 222
Q ss_pred CCeEEEEEcCcc-cCcCChh---hhhhccCCCcEEEEeccChH---Hhhccccccceecc----CChhHHHHHHHhCCcE
Q 012412 307 DQHFLWVVRESE-QAKLPKK---FSDETLTSHKSLVVSWCPQL---EVLAHEATGCFVTH----CGWNSTMEALSLGVPM 375 (464)
Q Consensus 307 ~~~~i~~~~~~~-~~~~~~~---~~~~~~~~~nv~~~~~~p~~---~ll~~~~~~~vI~H----gG~~s~~eal~~GvP~ 375 (464)
+.+++++ |... .....+. +.+.+...+||.+.+|+|+. .++..+|+ +|.- |...++.||+++|+|+
T Consensus 276 ~~~l~i~-G~~~~~g~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~Pv 352 (438)
T 3c48_A 276 NLRVIIC-GGPSGPNATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADI--VAVPSFNESFGLVAMEAQASGTPV 352 (438)
T ss_dssp SEEEEEE-CCBC------CHHHHHHHHTTCTTTEEEECCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHHTTCCE
T ss_pred ceEEEEE-eCCCCCCcHHHHHHHHHHHcCCCCcEEEcCCCChHHHHHHHHhCCE--EEECccccCCchHHHHHHHcCCCE
Confidence 3344443 3310 0111222 22232256899999999864 78999999 7743 3346899999999999
Q ss_pred eccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcCCc-hHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHH
Q 012412 376 VAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGER-GKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFV 454 (464)
Q Consensus 376 v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~~~-~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~ 454 (464)
|+.+ .......+++. +.|..++..+.+++.++|.++++|++ .+++.+++++..+.+. . ....+.+.+++
T Consensus 353 I~~~----~~~~~e~i~~~-~~g~~~~~~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~s-~----~~~~~~~~~~~ 422 (438)
T 3c48_A 353 IAAR----VGGLPIAVAEG-ETGLLVDGHSPHAWADALATLLDDDETRIRMGEDAVEHARTFS-W----AATAAQLSSLY 422 (438)
T ss_dssp EEES----CTTHHHHSCBT-TTEEEESSCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH-H----HHHHHHHHHHH
T ss_pred EecC----CCChhHHhhCC-CcEEECCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhCC-H----HHHHHHHHHHH
Confidence 9865 45566677777 78888876789999999999999863 2345555555554422 1 22355666677
Q ss_pred HHHHhhc
Q 012412 455 ASLACSK 461 (464)
Q Consensus 455 ~~l~~~~ 461 (464)
+.+...+
T Consensus 423 ~~~~~~~ 429 (438)
T 3c48_A 423 NDAIANE 429 (438)
T ss_dssp HHHHHTC
T ss_pred HHHhhhc
Confidence 7766653
|
| >3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=1.5e-12 Score=128.65 Aligned_cols=368 Identities=13% Similarity=0.069 Sum_probs=186.7
Q ss_pred CCcEEEEEcCC-----CccChHHHHHHHHHHHhCCCeEEEEeCcccccccc---------------c-CCCCCCceEEEc
Q 012412 12 KLAHCLVLTYP-----GQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLH---------------R-DSSSSSIPLEAI 70 (464)
Q Consensus 12 ~~~~il~~~~~-----~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~---------------~-~~~~~~~~~~~i 70 (464)
++|||++++.. ..|--..+..|++.|+++||+|+++++......-. . .....|+.++.+
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~ 80 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRI 80 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEEE
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEEEe
Confidence 36899987733 34555678999999999999999999643222100 0 001457777777
Q ss_pred cCCCCCCCCCCccCHHHH-HHHHHHhCcHHHHHHHHHhcC-CCCCccEEEeCCch--hhHHHHHHHcCCccEEEecchHH
Q 012412 71 SDGYDEGGYAQAESIEAY-LERFWQIGPQTLTELVEKMNG-SDSPVDCIVYDSIL--LWALDVAKKFGLLGAPFLTQSCA 146 (464)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~l~~-~~~p~DlVI~D~~~--~~~~~~A~~~giP~v~~~~~~~~ 146 (464)
+...-. ........... ...+.. ....+..+++.+.. ..+ +|+|++.... ..+..+++..++|+|........
T Consensus 81 ~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~Dii~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~ 157 (439)
T 3fro_A 81 GGGLLD-SEDVYGPGWDGLIRKAVT-FGRASVLLLNDLLREEPL-PDVVHFHDWHTVFAGALIKKYFKIPAVFTIHRLNK 157 (439)
T ss_dssp ESGGGG-CSSTTCSHHHHHHHHHHH-HHHHHHHHHHHHTTTSCC-CSEEEEESGGGHHHHHHHHHHHCCCEEEEESCCCC
T ss_pred cchhcc-ccccccCCcchhhhhhHH-HHHHHHHHHHHHhccCCC-CeEEEecchhhhhhHHHHhhccCCCEEEEeccccc
Confidence 641111 00011101111 222221 11233445555522 224 5999997544 33566678899999886554410
Q ss_pred HHHHHhhhhcCcccCCCCCCceeCCCCCCCCCCCCCCccccCCCCchHHHHHHHHHhhhccCCcEEEecchhhhhHHHHH
Q 012412 147 VDYIYYHVKKGSLELPLTGNEILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVE 226 (464)
Q Consensus 147 ~~~~~~~~~~~~~~~p~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~ 226 (464)
.. ++.. ....... .... ......+..... ..++.+++.|....+. ...
T Consensus 158 ~~---------------------~~~~-~~~~~~~-~~~~-~~~~~~~~~~~~-------~~ad~ii~~S~~~~~~-~~~ 205 (439)
T 3fro_A 158 SK---------------------LPAF-YFHEAGL-SELA-PYPDIDPEHTGG-------YIADIVTTVSRGYLID-EWG 205 (439)
T ss_dssp CC---------------------EEHH-HHHHTTC-GGGC-CSSEECHHHHHH-------HHCSEEEESCHHHHHH-THH
T ss_pred cc---------------------CchH-HhCcccc-cccc-ccceeeHhhhhh-------hhccEEEecCHHHHHH-Hhh
Confidence 00 0000 0000000 0000 000011223222 4567888888654443 112
Q ss_pred HHHh-cCCeeeecccCCCccc-cccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccc-c-CCHHHHHHHHHH
Q 012412 227 WLRK-TWSLRTIGPTIPSFYL-DKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFV-E-LKAEEMEELAWG 302 (464)
Q Consensus 227 ~~~~-~~~~~~vgp~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~-~-~~~~~~~~~~~a 302 (464)
.+.. ..++..|..-+....+ +...+.. .......+.+.++. +++ .+++..|+.. . -..+.+-..+..
T Consensus 206 ~~~~~~~~i~vi~ngvd~~~~~~~~~~~~-------~~~~~~~~~~~~~~-~~~-~~i~~~G~~~~~~Kg~~~li~a~~~ 276 (439)
T 3fro_A 206 FFRNFEGKITYVFNGIDCSFWNESYLTGS-------RDERKKSLLSKFGM-DEG-VTFMFIGRFDRGQKGVDVLLKAIEI 276 (439)
T ss_dssp HHGGGTTSEEECCCCCCTTTSCGGGSCSC-------HHHHHHHHHHHHTC-CSC-EEEEEECCSSCTTBCHHHHHHHHHH
T ss_pred hhhhcCCceeecCCCCCchhcCcccccch-------hhhhHHHHHHHcCC-CCC-cEEEEEcccccccccHHHHHHHHHH
Confidence 1111 1134333321111000 0000000 00012333344443 234 7888889876 3 244555444444
Q ss_pred Hhh----CCCeEEEEEcCccc-CcCChhhhhhccCCCcEEEEeccChH---Hhhccccccceecc----CChhHHHHHHH
Q 012412 303 LKS----SDQHFLWVVRESEQ-AKLPKKFSDETLTSHKSLVVSWCPQL---EVLAHEATGCFVTH----CGWNSTMEALS 370 (464)
Q Consensus 303 l~~----~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~nv~~~~~~p~~---~ll~~~~~~~vI~H----gG~~s~~eal~ 370 (464)
+.+ .+.+++++..+... ...-.++.+. .++++.+.+|+|+. .++..+|+ +|.- |-..++.||++
T Consensus 277 l~~~~~~~~~~l~i~G~g~~~~~~~l~~~~~~--~~~~~~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma 352 (439)
T 3fro_A 277 LSSKKEFQEMRFIIIGKGDPELEGWARSLEEK--HGNVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMC 352 (439)
T ss_dssp HHTSGGGGGEEEEEECCCCHHHHHHHHHHHHH--CTTEEEECSCCCHHHHHHHHTTCSE--EEECBSCCSSCHHHHHHHH
T ss_pred HHhcccCCCeEEEEEcCCChhHHHHHHHHHhh--cCCEEEEcCCCCHHHHHHHHHHCCE--EEeCCCCCCccHHHHHHHH
Confidence 544 24455444322211 0111122222 34566677899986 67899999 7632 33478999999
Q ss_pred hCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhc-CCc-hHHHHHHHHHHH
Q 012412 371 LGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILE-GER-GKELRRNAGKWR 433 (464)
Q Consensus 371 ~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~-~~~-~~~~~~~a~~l~ 433 (464)
+|+|+|+... ..... +.+. |.|..++..+.+++.++|.++++ |++ .+.+.+++++..
T Consensus 353 ~G~Pvi~s~~----~~~~e-~~~~-~~g~~~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~ 411 (439)
T 3fro_A 353 LGAIPIASAV----GGLRD-IITN-ETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRA 411 (439)
T ss_dssp TTCEEEEESS----THHHH-HCCT-TTCEEECTTCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHH
T ss_pred CCCCeEEcCC----CCcce-eEEc-CceEEeCCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 9999998653 34444 3346 77888877789999999999998 653 244555555544
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=1.2e-12 Score=127.60 Aligned_cols=314 Identities=13% Similarity=0.062 Sum_probs=173.6
Q ss_pred CCcEEEEEcC--C--CccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEccCCCCCCCCCCccCHHH
Q 012412 12 KLAHCLVLTY--P--GQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGYAQAESIEA 87 (464)
Q Consensus 12 ~~~~il~~~~--~--~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 87 (464)
++|||++++. + ..|.-..+..+++.| +||+|++++...............++.+..++..... . .. .
T Consensus 3 ~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~-~ 73 (394)
T 3okp_A 3 ASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYDKTLDYEVIRWPRSVML---P---TP-T 73 (394)
T ss_dssp -CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHHTTCSSEEEEESSSSCC---S---CH-H
T ss_pred CCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhccccceEEEEccccccc---c---ch-h
Confidence 4689998764 2 457888899999999 7999999998765431110012456788877743211 1 11 0
Q ss_pred HHHHHHHhCcHHHHHHHHHhcCCCCCccEEEeCCch--hhHHHHHHHcCCccEEE-ecchHHHHHHHhhhhcCcccCCCC
Q 012412 88 YLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSIL--LWALDVAKKFGLLGAPF-LTQSCAVDYIYYHVKKGSLELPLT 164 (464)
Q Consensus 88 ~~~~~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~--~~~~~~A~~~giP~v~~-~~~~~~~~~~~~~~~~~~~~~p~~ 164 (464)
....+..++++. + +|+|++.... .....+++.+|+|.+++ ........
T Consensus 74 --------~~~~l~~~~~~~----~-~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~---------------- 124 (394)
T 3okp_A 74 --------TAHAMAEIIRER----E-IDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVGW---------------- 124 (394)
T ss_dssp --------HHHHHHHHHHHT----T-CSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHHH----------------
T ss_pred --------hHHHHHHHHHhc----C-CCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhhh----------------
Confidence 011233344432 3 5999986443 33455688899995543 33221100
Q ss_pred CCceeCCCCCCCCCCCCCCccccCCCCchHHHHHHHHHhhhccCCcEEEecchhhhhHHHHHHHHhcCCeeeecccCCCc
Q 012412 165 GNEILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTWSLRTIGPTIPSF 244 (464)
Q Consensus 165 ~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~vgp~~~~~ 244 (464)
.. ......+. +. ....++.+++.|....+. .........++..|.+-+...
T Consensus 125 ------------------------~~-~~~~~~~~-~~--~~~~~d~ii~~s~~~~~~-~~~~~~~~~~~~vi~ngv~~~ 175 (394)
T 3okp_A 125 ------------------------SM-LPGSRQSL-RK--IGTEVDVLTYISQYTLRR-FKSAFGSHPTFEHLPSGVDVK 175 (394)
T ss_dssp ------------------------TT-SHHHHHHH-HH--HHHHCSEEEESCHHHHHH-HHHHHCSSSEEEECCCCBCTT
T ss_pred ------------------------hh-cchhhHHH-HH--HHHhCCEEEEcCHHHHHH-HHHhcCCCCCeEEecCCcCHH
Confidence 00 11122222 11 235677888888664443 222221111233333221110
Q ss_pred cccccccCccccccccccc----chhHHHHHhhcCCCCceEEEEeccccc-CCHHHHHHHHHHHhh--CCCeEEEEEcCc
Q 012412 245 YLDKQIEDDKDYGFSMFKS----STEACMKWLNDRAKESVVYVSYGSFVE-LKAEEMEELAWGLKS--SDQHFLWVVRES 317 (464)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~v~vs~Gs~~~-~~~~~~~~~~~al~~--~~~~~i~~~~~~ 317 (464)
.+.+ ....+.+.++. +++..+++..|+... -..+.+-..+..+.+ .+.+++++..+.
T Consensus 176 ---------------~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~ 239 (394)
T 3okp_A 176 ---------------RFTPATPEDKSATRKKLGF-TDTTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLIVGSGR 239 (394)
T ss_dssp ---------------TSCCCCHHHHHHHHHHTTC-CTTCCEEEEESCSCGGGCHHHHHHHHHHHHHHSTTCEEEEECCCT
T ss_pred ---------------HcCCCCchhhHHHHHhcCC-CcCceEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEcCch
Confidence 0111 12333344443 234467888888752 233333333333322 245665554332
Q ss_pred ccCcCChhhhhhc-cCCCcEEEEeccChH---Hhhccccccceec-----------cCChhHHHHHHHhCCcEeccCCcc
Q 012412 318 EQAKLPKKFSDET-LTSHKSLVVSWCPQL---EVLAHEATGCFVT-----------HCGWNSTMEALSLGVPMVAMPQWS 382 (464)
Q Consensus 318 ~~~~~~~~~~~~~-~~~~nv~~~~~~p~~---~ll~~~~~~~vI~-----------HgG~~s~~eal~~GvP~v~~P~~~ 382 (464)
. .+.+.+.. ...++|.+.+|+|+. .++..+|+ +|. -|...++.||+++|+|+|+.+..+
T Consensus 240 ~----~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~ 313 (394)
T 3okp_A 240 Y----ESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADI--FAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGG 313 (394)
T ss_dssp T----HHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCSE--EEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSSTT
T ss_pred H----HHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCCE--EEecCccccccccccccCcHHHHHHHcCCCEEEeCCCC
Confidence 1 12222110 145899999999866 68899999 775 455678999999999999977532
Q ss_pred chhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcCC
Q 012412 383 DQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGE 420 (464)
Q Consensus 383 DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~~ 420 (464)
... +... |.|...+..+.+++.++|.++++|+
T Consensus 314 ----~~e-~i~~-~~g~~~~~~d~~~l~~~i~~l~~~~ 345 (394)
T 3okp_A 314 ----APE-TVTP-ATGLVVEGSDVDKLSELLIELLDDP 345 (394)
T ss_dssp ----GGG-GCCT-TTEEECCTTCHHHHHHHHHHHHTCH
T ss_pred ----hHH-HHhc-CCceEeCCCCHHHHHHHHHHHHhCH
Confidence 222 2234 5677776668999999999999986
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=5e-13 Score=130.80 Aligned_cols=314 Identities=12% Similarity=0.043 Sum_probs=166.9
Q ss_pred CCCCcEEEEEcCC---C-ccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEccCCCCCCCCCCccCH
Q 012412 10 SCKLAHCLVLTYP---G-QGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGYAQAESI 85 (464)
Q Consensus 10 ~~~~~~il~~~~~---~-~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 85 (464)
..++|||++++.. . .|.-..+..+++.|.++||+|++++...............+ .+..++.....
T Consensus 17 ~~~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--------- 86 (406)
T 2gek_A 17 RGSHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDYVVSGG-KAVPIPYNGSV--------- 86 (406)
T ss_dssp ----CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCCCTTEEECC-CCC-----------------
T ss_pred CCCcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCccccCCcccccCC-cEEeccccCCc---------
Confidence 3457999987642 2 56668899999999999999999998654331110000011 22222210000
Q ss_pred HHHHHHHHHhCcHHHHHHHHHhcCCCCCccEEEeCCch--hhHHHHHHHcCCccEEEecchHHHHHHHhhhhcCcccCCC
Q 012412 86 EAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSIL--LWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPL 163 (464)
Q Consensus 86 ~~~~~~~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~--~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p~ 163 (464)
... .+.......+..++++. + +|+|++.... ..+..+++..++|++......
T Consensus 87 ~~~--~~~~~~~~~l~~~l~~~----~-~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~------------------- 140 (406)
T 2gek_A 87 ARL--RFGPATHRKVKKWIAEG----D-FDVLHIHEPNAPSLSMLALQAAEGPIVATFHTS------------------- 140 (406)
T ss_dssp ------CCHHHHHHHHHHHHHH----C-CSEEEEECCCSSSHHHHHHHHEESSEEEEECCC-------------------
T ss_pred ccc--cccHHHHHHHHHHHHhc----C-CCEEEECCccchHHHHHHHHhcCCCEEEEEcCc-------------------
Confidence 000 00000012233444432 3 4999986544 335667788899988754432
Q ss_pred CCCceeCCCCCCCCCCCCCCccccCCCCchHHHHHHHHHh-hhccCCcEEEecchhhhhHHHHHHHHhcCCeeeecccCC
Q 012412 164 TGNEILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQF-ENIDKADWVLCNTFYELEEEVVEWLRKTWSLRTIGPTIP 242 (464)
Q Consensus 164 ~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~vgp~~~ 242 (464)
.+. ......+. +.. ......+.+++.|....+. ....++. .++ .|.+-+.
T Consensus 141 ------~~~-------------------~~~~~~~~-~~~~~~~~~~d~ii~~s~~~~~~-~~~~~~~-~~~-vi~~~v~ 191 (406)
T 2gek_A 141 ------TTK-------------------SLTLSVFQ-GILRPYHEKIIGRIAVSDLARRW-QMEALGS-DAV-EIPNGVD 191 (406)
T ss_dssp ------CCS-------------------HHHHHHHH-STTHHHHTTCSEEEESSHHHHHH-HHHHHSS-CEE-ECCCCBC
T ss_pred ------chh-------------------hhhHHHHH-HHHHHHHhhCCEEEECCHHHHHH-HHHhcCC-CcE-EecCCCC
Confidence 000 00111111 111 3346778888888654433 1122211 122 2221111
Q ss_pred CccccccccCcccccccccccchhHHHHHhhcCCCCceEEEEeccc-c-cCCHHHHHHHHHHHhh--CCCeEEEEEcCcc
Q 012412 243 SFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSF-V-ELKAEEMEELAWGLKS--SDQHFLWVVRESE 318 (464)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~-~-~~~~~~~~~~~~al~~--~~~~~i~~~~~~~ 318 (464)
... +.+... -... +....+++..|+. . .-..+.+-..+..+.+ .+.+++++..+..
T Consensus 192 ~~~---------------~~~~~~----~~~~-~~~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~~~~ 251 (406)
T 2gek_A 192 VAS---------------FADAPL----LDGY-PREGRTVLFLGRYDEPRKGMAVLLAALPKLVARFPDVEILIVGRGDE 251 (406)
T ss_dssp HHH---------------HHTCCC----CTTC-SCSSCEEEEESCTTSGGGCHHHHHHHHHHHHTTSTTCEEEEESCSCH
T ss_pred hhh---------------cCCCch----hhhc-cCCCeEEEEEeeeCccccCHHHHHHHHHHHHHHCCCeEEEEEcCCcH
Confidence 000 000000 0000 1123577888887 4 2233333333333332 2455554433221
Q ss_pred cCcCChhhhhhcc-CCCcEEEEeccChH---Hhhccccccceec----cCCh-hHHHHHHHhCCcEeccCCccchhhHHH
Q 012412 319 QAKLPKKFSDETL-TSHKSLVVSWCPQL---EVLAHEATGCFVT----HCGW-NSTMEALSLGVPMVAMPQWSDQSTNAK 389 (464)
Q Consensus 319 ~~~~~~~~~~~~~-~~~nv~~~~~~p~~---~ll~~~~~~~vI~----HgG~-~s~~eal~~GvP~v~~P~~~DQ~~na~ 389 (464)
+.+.+... ..+||.+.+++++. .++..+++ +|. +.|+ .++.||+++|+|+|+.+. .....
T Consensus 252 -----~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e 320 (406)
T 2gek_A 252 -----DELREQAGDLAGHLRFLGQVDDATKASAMRSADV--YCAPHLGGESFGIVLVEAMAAGTAVVASDL----DAFRR 320 (406)
T ss_dssp -----HHHHHHTGGGGGGEEECCSCCHHHHHHHHHHSSE--EEECCCSCCSSCHHHHHHHHHTCEEEECCC----HHHHH
T ss_pred -----HHHHHHHHhccCcEEEEecCCHHHHHHHHHHCCE--EEecCCCCCCCchHHHHHHHcCCCEEEecC----CcHHH
Confidence 33332211 25789999999975 88999999 663 3444 489999999999998764 56777
Q ss_pred HHHhHhcceeeccCcCHHHHHHHHHHHhcCC
Q 012412 390 YILDVWKTGLKFPIVKRDAIADCISEILEGE 420 (464)
Q Consensus 390 rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~~ 420 (464)
.+.+. +.|...+..+.+++.++|.++++|+
T Consensus 321 ~i~~~-~~g~~~~~~d~~~l~~~i~~l~~~~ 350 (406)
T 2gek_A 321 VLADG-DAGRLVPVDDADGMAAALIGILEDD 350 (406)
T ss_dssp HHTTT-TSSEECCTTCHHHHHHHHHHHHHCH
T ss_pred HhcCC-CceEEeCCCCHHHHHHHHHHHHcCH
Confidence 77777 7888887668999999999999986
|
| >1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3 | Back alignment and structure |
|---|
Probab=99.49 E-value=8.7e-13 Score=127.90 Aligned_cols=131 Identities=15% Similarity=0.145 Sum_probs=86.7
Q ss_pred CCceEEEEecccccCCHHHHHHHHHHHhh----C-CCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccCh---HHhh
Q 012412 277 KESVVYVSYGSFVELKAEEMEELAWGLKS----S-DQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQ---LEVL 348 (464)
Q Consensus 277 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~----~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~---~~ll 348 (464)
++++|+++.|...... .+..++++++. . +.++++..+.+. .+.+.+.+.....++|.+.+++++ ..++
T Consensus 197 ~~~~vl~~~gr~~~~k--~~~~ll~a~~~l~~~~~~~~lv~~~g~~~--~~~~~l~~~~~~~~~v~~~g~~g~~~~~~~~ 272 (376)
T 1v4v_A 197 EGPYVTVTMHRRENWP--LLSDLAQALKRVAEAFPHLTFVYPVHLNP--VVREAVFPVLKGVRNFVLLDPLEYGSMAALM 272 (376)
T ss_dssp SSCEEEECCCCGGGGG--GHHHHHHHHHHHHHHCTTSEEEEECCSCH--HHHHHHHHHHTTCTTEEEECCCCHHHHHHHH
T ss_pred CCCEEEEEeCcccchH--HHHHHHHHHHHHHhhCCCeEEEEECCCCH--HHHHHHHHHhccCCCEEEECCCCHHHHHHHH
Confidence 3557888888653221 23444555433 2 456655545321 112223222112368999966554 4899
Q ss_pred ccccccceeccCChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcCC
Q 012412 349 AHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGE 420 (464)
Q Consensus 349 ~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~~ 420 (464)
+.+|+ ||+.+| |.+.||+++|+|+|+.+...++.. +.+. |.|+.++ .++++|.+++.++++|+
T Consensus 273 ~~ad~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~----~~~~-g~g~lv~-~d~~~la~~i~~ll~d~ 335 (376)
T 1v4v_A 273 RASLL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPE----GLKA-GILKLAG-TDPEGVYRVVKGLLENP 335 (376)
T ss_dssp HTEEE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHH----HHHH-TSEEECC-SCHHHHHHHHHHHHTCH
T ss_pred HhCcE--EEECCc-CHHHHHHHcCCCEEeccCCCcchh----hhcC-CceEECC-CCHHHHHHHHHHHHhCh
Confidence 99999 998873 556699999999999876665554 3567 8888775 48999999999999986
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=9.8e-12 Score=125.30 Aligned_cols=133 Identities=16% Similarity=0.118 Sum_probs=88.9
Q ss_pred ceEEEEecccccCCHHHHHHHHHHHhhCC-----CeEEEEEcCcccC-----cC-------Chhh---hhhccCCCcEEE
Q 012412 279 SVVYVSYGSFVELKAEEMEELAWGLKSSD-----QHFLWVVRESEQA-----KL-------PKKF---SDETLTSHKSLV 338 (464)
Q Consensus 279 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~~-----~~~i~~~~~~~~~-----~~-------~~~~---~~~~~~~~nv~~ 338 (464)
..+++..|+.. +.+-...++++++.+. ...++.+|+.... .+ .+++ .+.+.+.++|.+
T Consensus 262 ~~~i~~vGrl~--~~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~~V~~ 339 (499)
T 2r60_A 262 LPAIIASSRLD--QKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSM 339 (499)
T ss_dssp SCEEEECSCCC--GGGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTBCTTSCHHHHHHHHHHHHHHHHTTCBTTEEE
T ss_pred CcEEEEeecCc--cccCHHHHHHHHHHHHHhCCCceEEEEECCCCCcccccccccccchHHHHHHHHHHHhcCCCceEEE
Confidence 35677888875 3344555666665542 2234455541100 01 1122 222225689999
Q ss_pred EeccChH---Hhhccc----cccceecc---CC-hhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHH
Q 012412 339 VSWCPQL---EVLAHE----ATGCFVTH---CG-WNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRD 407 (464)
Q Consensus 339 ~~~~p~~---~ll~~~----~~~~vI~H---gG-~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~ 407 (464)
.+++|+. .++..+ |+ +|.- -| ..++.||+++|+|+|+.. .......+.+. +.|..++..+.+
T Consensus 340 ~G~v~~~~~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~----~~g~~e~v~~~-~~g~l~~~~d~~ 412 (499)
T 2r60_A 340 FPLNSQQELAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTR----NGGPAEILDGG-KYGVLVDPEDPE 412 (499)
T ss_dssp EECCSHHHHHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEES----SBHHHHHTGGG-TSSEEECTTCHH
T ss_pred CCCCCHHHHHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEec----CCCHHHHhcCC-ceEEEeCCCCHH
Confidence 9999865 788899 98 7732 23 468899999999999865 34566666666 688888767899
Q ss_pred HHHHHHHHHhcCC
Q 012412 408 AIADCISEILEGE 420 (464)
Q Consensus 408 ~l~~~i~~ll~~~ 420 (464)
+++++|.++++|+
T Consensus 413 ~la~~i~~ll~~~ 425 (499)
T 2r60_A 413 DIARGLLKAFESE 425 (499)
T ss_dssp HHHHHHHHHHSCH
T ss_pred HHHHHHHHHHhCH
Confidence 9999999999986
|
| >3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.46 E-value=1.1e-12 Score=128.02 Aligned_cols=132 Identities=11% Similarity=0.147 Sum_probs=85.9
Q ss_pred CCceEEEEecccccCCHHHHHHHHHHHhh-----CCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccCh---HHhh
Q 012412 277 KESVVYVSYGSFVELKAEEMEELAWGLKS-----SDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQ---LEVL 348 (464)
Q Consensus 277 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~-----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~---~~ll 348 (464)
+++.++++.|...... +.+..++++++. .+.++++..+.+. .+.+.+.+.+...+|+++.+++++ ..++
T Consensus 223 ~~~~vlv~~~r~~~~~-~~l~~ll~a~~~l~~~~~~~~~v~~~~~~~--~~~~~l~~~~~~~~~v~l~~~l~~~~~~~l~ 299 (403)
T 3ot5_A 223 DNRLILMTAHRRENLG-EPMQGMFEAVREIVESREDTELVYPMHLNP--AVREKAMAILGGHERIHLIEPLDAIDFHNFL 299 (403)
T ss_dssp TCEEEEECCCCHHHHT-THHHHHHHHHHHHHHHCTTEEEEEECCSCH--HHHHHHHHHHTTCTTEEEECCCCHHHHHHHH
T ss_pred CCCEEEEEeCcccccC-cHHHHHHHHHHHHHHhCCCceEEEecCCCH--HHHHHHHHHhCCCCCEEEeCCCCHHHHHHHH
Confidence 4567778766432111 123445554432 2456766655321 111222221113479999999874 3889
Q ss_pred ccccccceeccCChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcCC
Q 012412 349 AHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGE 420 (464)
Q Consensus 349 ~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~~ 420 (464)
+.+++ +|+-.|..+ .||+++|+|+|++|...++.. +.+. |.|+.+.. ++++|.+++.++|+|+
T Consensus 300 ~~ad~--vv~~SGg~~-~EA~a~g~PvV~~~~~~~~~e----~v~~-g~~~lv~~-d~~~l~~ai~~ll~~~ 362 (403)
T 3ot5_A 300 RKSYL--VFTDSGGVQ-EEAPGMGVPVLVLRDTTERPE----GIEA-GTLKLIGT-NKENLIKEALDLLDNK 362 (403)
T ss_dssp HHEEE--EEECCHHHH-HHGGGTTCCEEECCSSCSCHH----HHHH-TSEEECCS-CHHHHHHHHHHHHHCH
T ss_pred HhcCE--EEECCccHH-HHHHHhCCCEEEecCCCcchh----heeC-CcEEEcCC-CHHHHHHHHHHHHcCH
Confidence 99999 998875333 799999999999975555543 3478 88877654 8999999999999986
|
| >3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.45 E-value=4.7e-13 Score=130.50 Aligned_cols=132 Identities=14% Similarity=0.179 Sum_probs=86.0
Q ss_pred CCceEEEEecccccCCHHHHHHHHHHHhhC-----CCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccCh---HHhh
Q 012412 277 KESVVYVSYGSFVELKAEEMEELAWGLKSS-----DQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQ---LEVL 348 (464)
Q Consensus 277 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~---~~ll 348 (464)
++++|+++.+...... +.+..++++++.+ +.++++.++.+. ...+.+.+.+...+|+.+.+++++ ..++
T Consensus 229 ~~~~vlv~~hR~~~~~-~~~~~ll~A~~~l~~~~~~~~~v~~~g~~~--~~~~~l~~~~~~~~~v~~~~~lg~~~~~~l~ 305 (396)
T 3dzc_A 229 SKKLILVTGHRRESFG-GGFERICQALITTAEQHPECQILYPVHLNP--NVREPVNKLLKGVSNIVLIEPQQYLPFVYLM 305 (396)
T ss_dssp TSEEEEEECSCBCCCT-THHHHHHHHHHHHHHHCTTEEEEEECCBCH--HHHHHHHHHTTTCTTEEEECCCCHHHHHHHH
T ss_pred CCCEEEEEECCcccch-hHHHHHHHHHHHHHHhCCCceEEEEeCCCh--HHHHHHHHHHcCCCCEEEeCCCCHHHHHHHH
Confidence 4567777763322221 1245566665432 456666555321 112222222113479999888754 3889
Q ss_pred ccccccceeccCChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcCC
Q 012412 349 AHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGE 420 (464)
Q Consensus 349 ~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~~ 420 (464)
+.+++ ||+-.| |...||+++|+|+|+.....+.. .+.+. |.++.+.. ++++|.+++.++++|+
T Consensus 306 ~~ad~--vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~----e~v~~-G~~~lv~~-d~~~l~~ai~~ll~d~ 368 (396)
T 3dzc_A 306 DRAHI--ILTDSG-GIQEEAPSLGKPVLVMRETTERP----EAVAA-GTVKLVGT-NQQQICDALSLLLTDP 368 (396)
T ss_dssp HHCSE--EEESCS-GGGTTGGGGTCCEEECCSSCSCH----HHHHH-TSEEECTT-CHHHHHHHHHHHHHCH
T ss_pred HhcCE--EEECCc-cHHHHHHHcCCCEEEccCCCcch----HHHHc-CceEEcCC-CHHHHHHHHHHHHcCH
Confidence 99999 999887 66689999999999975444442 25677 87766543 7999999999999986
|
| >1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=4e-12 Score=123.53 Aligned_cols=132 Identities=15% Similarity=0.199 Sum_probs=88.0
Q ss_pred CCceEEEEecccccCCHHHHHHHHHHHhh----C-CCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccCh---HHhh
Q 012412 277 KESVVYVSYGSFVELKAEEMEELAWGLKS----S-DQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQ---LEVL 348 (464)
Q Consensus 277 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~----~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~---~~ll 348 (464)
+++.++++.|+..... +.+..++++++. . +.++++..+... ...+.+.+.+...+||.+.+++++ ..++
T Consensus 204 ~~~~vl~~~gr~~~~~-kg~~~li~a~~~l~~~~~~~~l~i~~g~~~--~~~~~l~~~~~~~~~v~~~g~~~~~~~~~~~ 280 (384)
T 1vgv_A 204 DKKMILVTGHRRESFG-RGFEEICHALADIATTHQDIQIVYPVHLNP--NVREPVNRILGHVKNVILIDPQEYLPFVWLM 280 (384)
T ss_dssp TSEEEEEECCCBSSCC-HHHHHHHHHHHHHHHHCTTEEEEEECCBCH--HHHHHHHHHHTTCTTEEEECCCCHHHHHHHH
T ss_pred CCCEEEEEeCCccccc-hHHHHHHHHHHHHHhhCCCeEEEEEcCCCH--HHHHHHHHHhhcCCCEEEeCCCCHHHHHHHH
Confidence 4567888888765321 334455555433 2 455555434221 122223222113368999877764 3889
Q ss_pred ccccccceeccCChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcCC
Q 012412 349 AHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGE 420 (464)
Q Consensus 349 ~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~~ 420 (464)
..+|+ +|+.+| +++.||+++|+|+|+.+..... ..+.+. |.|..++. ++++|.++|.++++|+
T Consensus 281 ~~ad~--~v~~Sg-~~~lEA~a~G~PvI~~~~~~~~----~e~v~~-g~g~lv~~-d~~~la~~i~~ll~d~ 343 (384)
T 1vgv_A 281 NHAWL--ILTDSG-GIQEEAPSLGKPVLVMRDTTER----PEAVTA-GTVRLVGT-DKQRIVEEVTRLLKDE 343 (384)
T ss_dssp HHCSE--EEESSS-TGGGTGGGGTCCEEEESSCCSC----HHHHHH-TSEEEECS-SHHHHHHHHHHHHHCH
T ss_pred HhCcE--EEECCc-chHHHHHHcCCCEEEccCCCCc----chhhhC-CceEEeCC-CHHHHHHHHHHHHhCh
Confidence 99999 998875 4488999999999999864333 235677 88888865 8999999999999986
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=1.6e-11 Score=118.71 Aligned_cols=141 Identities=14% Similarity=0.187 Sum_probs=96.3
Q ss_pred HHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhCC------CeEEEEEcCcccCcCChhhhhhccCCCcEEEEec
Q 012412 268 CMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSD------QHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSW 341 (464)
Q Consensus 268 ~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~------~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ 341 (464)
+.+.++. ++++.+++..|+.. +.+....++++++.+. .+++ .+|.+....+ .++.+.+...+||.+.++
T Consensus 186 ~~~~~~~-~~~~~~i~~~G~~~--~~K~~~~li~a~~~l~~~~~~~~~l~-i~G~g~~~~~-~~~~~~~~~~~~v~~~g~ 260 (374)
T 2iw1_A 186 YRQKNGI-KEQQNLLLQVGSDF--GRKGVDRSIEALASLPESLRHNTLLF-VVGQDKPRKF-EALAEKLGVRSNVHFFSG 260 (374)
T ss_dssp HHHHTTC-CTTCEEEEEECSCT--TTTTHHHHHHHHHTSCHHHHHTEEEE-EESSSCCHHH-HHHHHHHTCGGGEEEESC
T ss_pred HHHHhCC-CCCCeEEEEeccch--hhcCHHHHHHHHHHhHhccCCceEEE-EEcCCCHHHH-HHHHHHcCCCCcEEECCC
Confidence 3344433 23456788888765 2344555666766553 3333 3443321111 122222224689999998
Q ss_pred cChH-Hhhccccccceec----cCChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeecc-CcCHHHHHHHHHH
Q 012412 342 CPQL-EVLAHEATGCFVT----HCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP-IVKRDAIADCISE 415 (464)
Q Consensus 342 ~p~~-~ll~~~~~~~vI~----HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~-~~~~~~l~~~i~~ 415 (464)
..+. .++..+|+ +|. -|..+++.||+++|+|+|+.+. ..+...+++. +.|..++ ..+.+++.++|.+
T Consensus 261 ~~~~~~~~~~ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i~~~-~~g~~~~~~~~~~~l~~~i~~ 333 (374)
T 2iw1_A 261 RNDVSELMAAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAV----CGYAHYIADA-NCGTVIAEPFSQEQLNEVLRK 333 (374)
T ss_dssp CSCHHHHHHHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETT----STTTHHHHHH-TCEEEECSSCCHHHHHHHHHH
T ss_pred cccHHHHHHhcCE--EEeccccCCcccHHHHHHHCCCCEEEecC----CCchhhhccC-CceEEeCCCCCHHHHHHHHHH
Confidence 6654 89999999 775 4566889999999999998764 4567788888 9999997 7799999999999
Q ss_pred HhcCC
Q 012412 416 ILEGE 420 (464)
Q Consensus 416 ll~~~ 420 (464)
+++|+
T Consensus 334 l~~~~ 338 (374)
T 2iw1_A 334 ALTQS 338 (374)
T ss_dssp HHHCH
T ss_pred HHcCh
Confidence 99986
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=1.1e-10 Score=113.64 Aligned_cols=323 Identities=14% Similarity=0.130 Sum_probs=166.3
Q ss_pred CcEEEEEcCCC-ccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEccCCCCCCCCCCccCHHHHHHH
Q 012412 13 LAHCLVLTYPG-QGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGYAQAESIEAYLER 91 (464)
Q Consensus 13 ~~~il~~~~~~-~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 91 (464)
.+++....++. .|.-..+..|++.|.++||+|++++....... . ....++.+..++..... ..... . . .+..
T Consensus 15 ~~~~~~~~~p~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~-~--~~~~~i~~~~~~~~~~~-~~~~~-~-~-~~~~ 87 (394)
T 2jjm_A 15 KLKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGLPFRL-N--KVYPNIYFHEVTVNQYS-VFQYP-P-Y-DLAL 87 (394)
T ss_dssp CCEEEEECCC--CHHHHHHHHHHHHHHHTTCEEEEECSSCC-------CCCTTEEEECCCCC-----CCSC-C-H-HHHH
T ss_pred eeeeehhcCCCCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCcc-c--ccCCceEEEeccccccc-ccccc-c-c-cHHH
Confidence 35677555554 46777888999999999999999998543221 1 12456666665521111 00000 0 0 0110
Q ss_pred HHHhCcHHHHHHHHHhcCCCCCccEEEeCCchh--hHHHHHH-Hc--CCccEEEecchHHHHHHHhhhhcCcccCCCCCC
Q 012412 92 FWQIGPQTLTELVEKMNGSDSPVDCIVYDSILL--WALDVAK-KF--GLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGN 166 (464)
Q Consensus 92 ~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~~--~~~~~A~-~~--giP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 166 (464)
...+..++++. +| |+|++..... ....++. .. ++|++..........
T Consensus 88 -----~~~l~~~l~~~----~~-Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~------------------ 139 (394)
T 2jjm_A 88 -----ASKMAEVAQRE----NL-DILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDITV------------------ 139 (394)
T ss_dssp -----HHHHHHHHHHH----TC-SEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHHT------------------
T ss_pred -----HHHHHHHHHHc----CC-CEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCcccc------------------
Confidence 11233444442 44 9999974332 2233343 44 499887655431100
Q ss_pred ceeCCCCCCCCCCCCCCccccCCCCchHHHHHHHHHhhhccCCcEEEecchhhhhHHHHHHHHhcCCeeeecccCCCccc
Q 012412 167 EILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTWSLRTIGPTIPSFYL 246 (464)
Q Consensus 167 ~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~vgp~~~~~~~ 246 (464)
.+. ......+.+.. +..++.+++.|....+. .........++..|..-+...
T Consensus 140 ----~~~--------------~~~~~~~~~~~-------~~~ad~ii~~s~~~~~~-~~~~~~~~~~~~vi~ngv~~~-- 191 (394)
T 2jjm_A 140 ----LGS--------------DPSLNNLIRFG-------IEQSDVVTAVSHSLINE-THELVKPNKDIQTVYNFIDER-- 191 (394)
T ss_dssp ----TTT--------------CTTTHHHHHHH-------HHHSSEEEESCHHHHHH-HHHHTCCSSCEEECCCCCCTT--
T ss_pred ----cCC--------------CHHHHHHHHHH-------HhhCCEEEECCHHHHHH-HHHhhCCcccEEEecCCccHH--
Confidence 000 00011122222 25567888888654332 111111111333333221110
Q ss_pred cccccCccccccccccc-chhHHHHHhhcCCCCceEEEEeccccc-CCHHHHHHHHHHHhh-CCCeEEEEEcCcccCcCC
Q 012412 247 DKQIEDDKDYGFSMFKS-STEACMKWLNDRAKESVVYVSYGSFVE-LKAEEMEELAWGLKS-SDQHFLWVVRESEQAKLP 323 (464)
Q Consensus 247 ~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~v~vs~Gs~~~-~~~~~~~~~~~al~~-~~~~~i~~~~~~~~~~~~ 323 (464)
.+.+ ....+.+.++. +++..+++..|+... -..+.+-..+..+.+ .+.+++++..+.....+
T Consensus 192 -------------~~~~~~~~~~~~~~~~-~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~l~i~G~g~~~~~l- 256 (394)
T 2jjm_A 192 -------------VYFKRDMTQLKKEYGI-SESEKILIHISNFRKVKRVQDVVQAFAKIVTEVDAKLLLVGDGPEFCTI- 256 (394)
T ss_dssp -------------TCCCCCCHHHHHHTTC-C---CEEEEECCCCGGGTHHHHHHHHHHHHHSSCCEEEEECCCTTHHHH-
T ss_pred -------------hcCCcchHHHHHHcCC-CCCCeEEEEeeccccccCHHHHHHHHHHHHhhCCCEEEEECCchHHHHH-
Confidence 0111 12333333332 123456777888762 233333333333322 34555544322211111
Q ss_pred hhhhhhccCCCcEEEEeccChH-Hhhcccccccee----ccCChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcce
Q 012412 324 KKFSDETLTSHKSLVVSWCPQL-EVLAHEATGCFV----THCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTG 398 (464)
Q Consensus 324 ~~~~~~~~~~~nv~~~~~~p~~-~ll~~~~~~~vI----~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g 398 (464)
.++.+.+...+||.+.++..+. .++..+|+ +| .-|...++.||+++|+|+|+.+.. .....+++. +.|
T Consensus 257 ~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~PvI~~~~~----~~~e~v~~~-~~g 329 (394)
T 2jjm_A 257 LQLVKNLHIEDRVLFLGKQDNVAELLAMSDL--MLLLSEKESFGLVLLEAMACGVPCIGTRVG----GIPEVIQHG-DTG 329 (394)
T ss_dssp HHHHHTTTCGGGBCCCBSCSCTHHHHHTCSE--EEECCSCCSCCHHHHHHHHTTCCEEEECCT----TSTTTCCBT-TTE
T ss_pred HHHHHHcCCCCeEEEeCchhhHHHHHHhCCE--EEeccccCCCchHHHHHHhcCCCEEEecCC----ChHHHhhcC-Cce
Confidence 1122222235789888876543 89999999 77 455567899999999999987643 334445556 678
Q ss_pred eeccCcCHHHHHHHHHHHhcCC
Q 012412 399 LKFPIVKRDAIADCISEILEGE 420 (464)
Q Consensus 399 ~~l~~~~~~~l~~~i~~ll~~~ 420 (464)
...+..+.+++.++|.++++|+
T Consensus 330 ~~~~~~d~~~la~~i~~l~~~~ 351 (394)
T 2jjm_A 330 YLCEVGDTTGVADQAIQLLKDE 351 (394)
T ss_dssp EEECTTCHHHHHHHHHHHHHCH
T ss_pred EEeCCCCHHHHHHHHHHHHcCH
Confidence 8877668999999999999986
|
| >3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A | Back alignment and structure |
|---|
Probab=99.33 E-value=2.2e-10 Score=110.79 Aligned_cols=132 Identities=16% Similarity=0.139 Sum_probs=85.4
Q ss_pred CCceEEEEecccccCCHHHHHHHHHHHhhC-----CCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChH---Hhh
Q 012412 277 KESVVYVSYGSFVELKAEEMEELAWGLKSS-----DQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQL---EVL 348 (464)
Q Consensus 277 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~---~ll 348 (464)
++++++++.|...... +.+..++++++.+ +.++++ +......+.+.+.+.+...+||.+.+++++. .++
T Consensus 204 ~~~~vl~~~gr~~~~~-K~~~~li~a~~~l~~~~~~~~~i~--~~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ 280 (375)
T 3beo_A 204 NNRLVLMTAHRRENLG-EPMRNMFRAIKRLVDKHEDVQVVY--PVHMNPVVRETANDILGDYGRIHLIEPLDVIDFHNVA 280 (375)
T ss_dssp TSEEEEEECCCGGGTT-HHHHHHHHHHHHHHHHCTTEEEEE--ECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHH
T ss_pred CCCeEEEEecccccch-hHHHHHHHHHHHHHhhCCCeEEEE--eCCCCHHHHHHHHHHhhccCCEEEeCCCCHHHHHHHH
Confidence 4556777888754221 3455566665432 345443 3221111112222221123799998877754 889
Q ss_pred ccccccceeccCChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcCC
Q 012412 349 AHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGE 420 (464)
Q Consensus 349 ~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~~ 420 (464)
..+|+ +|+.. .+++.||+++|+|+|+.+..... ..+.+. |.|..++. +.++|.++|.++++|+
T Consensus 281 ~~ad~--~v~~s-g~~~lEA~a~G~Pvi~~~~~~~~----~e~v~~-g~g~~v~~-d~~~la~~i~~ll~~~ 343 (375)
T 3beo_A 281 ARSYL--MLTDS-GGVQEEAPSLGVPVLVLRDTTER----PEGIEA-GTLKLAGT-DEETIFSLADELLSDK 343 (375)
T ss_dssp HTCSE--EEECC-HHHHHHHHHHTCCEEECSSCCSC----HHHHHT-TSEEECCS-CHHHHHHHHHHHHHCH
T ss_pred HhCcE--EEECC-CChHHHHHhcCCCEEEecCCCCC----ceeecC-CceEEcCC-CHHHHHHHHHHHHhCh
Confidence 99999 99876 45689999999999988543332 234567 88887764 8999999999999986
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* | Back alignment and structure |
|---|
Probab=99.33 E-value=1.9e-11 Score=116.84 Aligned_cols=125 Identities=11% Similarity=0.054 Sum_probs=88.9
Q ss_pred EEEEecccccCCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChH---Hhhcccccccee
Q 012412 281 VYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQL---EVLAHEATGCFV 357 (464)
Q Consensus 281 v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~---~ll~~~~~~~vI 357 (464)
+++..|+.. +.+-...++++++.++.+++++-.+.....+ +++.+. ..+||.+.+|+++. .++..+|+ +|
T Consensus 164 ~i~~vG~~~--~~Kg~~~li~a~~~~~~~l~i~G~g~~~~~l-~~~~~~--~~~~v~~~g~~~~~~l~~~~~~adv--~v 236 (342)
T 2iuy_A 164 FLLFMGRVS--PHKGALEAAAFAHACGRRLVLAGPAWEPEYF-DEITRR--YGSTVEPIGEVGGERRLDLLASAHA--VL 236 (342)
T ss_dssp CEEEESCCC--GGGTHHHHHHHHHHHTCCEEEESCCCCHHHH-HHHHHH--HTTTEEECCCCCHHHHHHHHHHCSE--EE
T ss_pred EEEEEeccc--cccCHHHHHHHHHhcCcEEEEEeCcccHHHH-HHHHHH--hCCCEEEeccCCHHHHHHHHHhCCE--EE
Confidence 566678765 3455566777777667776665433211111 223333 23899999999976 88999999 66
Q ss_pred --cc-----------CC-hhHHHHHHHhCCcEeccCCccchhhHHHHHHh--HhcceeeccCcCHHHHHHHHHHHhc
Q 012412 358 --TH-----------CG-WNSTMEALSLGVPMVAMPQWSDQSTNAKYILD--VWKTGLKFPIVKRDAIADCISEILE 418 (464)
Q Consensus 358 --~H-----------gG-~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~--~~G~g~~l~~~~~~~l~~~i~~ll~ 418 (464)
+. -| ..++.||+++|+|+|+... ......+++ . +.|...+. +.+++.++|.++++
T Consensus 237 ~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~----~~~~e~~~~~~~-~~g~~~~~-d~~~l~~~i~~l~~ 307 (342)
T 2iuy_A 237 AMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGN----GCLAEIVPSVGE-VVGYGTDF-APDEARRTLAGLPA 307 (342)
T ss_dssp ECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCT----TTHHHHGGGGEE-ECCSSSCC-CHHHHHHHHHTSCC
T ss_pred ECCcccccccccccccCccHHHHHHHhcCCCEEEcCC----CChHHHhcccCC-CceEEcCC-CHHHHHHHHHHHHH
Confidence 32 34 4678999999999998764 557777877 6 77887777 99999999999987
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* | Back alignment and structure |
|---|
Probab=99.29 E-value=2.5e-10 Score=112.12 Aligned_cols=134 Identities=12% Similarity=0.020 Sum_probs=87.8
Q ss_pred CceEEEEeccccc-CCHHHHHHHHHHH-hhC-CCeEEEEEcCccc----CcCChhhhhhccCCCcEEEEeccC---h---
Q 012412 278 ESVVYVSYGSFVE-LKAEEMEELAWGL-KSS-DQHFLWVVRESEQ----AKLPKKFSDETLTSHKSLVVSWCP---Q--- 344 (464)
Q Consensus 278 ~~~v~vs~Gs~~~-~~~~~~~~~~~al-~~~-~~~~i~~~~~~~~----~~~~~~~~~~~~~~~nv~~~~~~p---~--- 344 (464)
+..+++..|.... -..+.+-..+..+ ++. +.+++++..+... ...-+++.+.+...++|.+.+|++ +
T Consensus 230 ~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~~~~~V~~~G~~~~~~~~~~ 309 (416)
T 2x6q_A 230 EKPIITQVSRFDPWKGIFDVIEIYRKVKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAREV 309 (416)
T ss_dssp TSCEEEEECCCCTTSCHHHHHHHHHHHHHHCTTCEEEEEECCCTTCHHHHHHHHHHHHHHTTCTTEEEEEGGGTCCHHHH
T ss_pred CCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEEecCcccchhHHHHHHHHHHHhCCCCcEEEecccCCCCHHHH
Confidence 3456777888753 2333333333333 222 5666665544211 001122233333568999999886 2
Q ss_pred HHhhccccccceeccC----ChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcCC
Q 012412 345 LEVLAHEATGCFVTHC----GWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGE 420 (464)
Q Consensus 345 ~~ll~~~~~~~vI~Hg----G~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~~ 420 (464)
..++..+|+ +|.-. ...++.||+++|+|+|+.+. ..+...+++. +.|...+ +.+++.++|.++++|+
T Consensus 310 ~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i~~~-~~g~l~~--d~~~la~~i~~ll~~~ 380 (416)
T 2x6q_A 310 NAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQIVDG-ETGFLVR--DANEAVEVVLYLLKHP 380 (416)
T ss_dssp HHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHCCBT-TTEEEES--SHHHHHHHHHHHHHCH
T ss_pred HHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhheecC-CCeEEEC--CHHHHHHHHHHHHhCH
Confidence 278899999 77543 45688999999999998663 5677777777 7888886 8999999999999986
|
| >4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii} | Back alignment and structure |
|---|
Probab=99.16 E-value=1.1e-10 Score=112.87 Aligned_cols=318 Identities=14% Similarity=0.116 Sum_probs=169.7
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCccccc-ccccCCCCCCceEEEccCCCCCCCCCCccCHHHHHH
Q 012412 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYK-SLHRDSSSSSIPLEAISDGYDEGGYAQAESIEAYLE 90 (464)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 90 (464)
-++|++++ .|++-.+.-+.+|.++|.++ +++.++.+....+ .+... -..++.+. -|+ +.- +.. ..+....+.
T Consensus 8 ~~~~~~~v-~GtRpe~~k~~p~~~~l~~~-~~~~~~~tgqh~~~~~~~~-~~~~~~i~-~~~-~~l-~~~-~~~~~~~~~ 80 (385)
T 4hwg_A 8 HMLKVMTI-VGTRPELIKLCCVISEFDKH-TKHILVHTGQNYAYELNQV-FFDDMGIR-KPD-YFL-EVA-ADNTAKSIG 80 (385)
T ss_dssp CCCEEEEE-ECSHHHHHHHHHHHHHHHHH-SEEEEEECSCHHHHHHTHH-HHC-CCCC-CCS-EEC-CCC-CCCSHHHHH
T ss_pred hhhheeEE-EEcCHhHHHHHHHHHHHHhc-CCEEEEEeCCCCChhHHHH-HHhhCCCC-CCc-eec-CCC-CCCHHHHHH
Confidence 35677665 46677788888888889877 9988888877654 22200 01222221 111 110 111 123333322
Q ss_pred HHHHhCcHHHHHHHHHhcCCCCCccEEEe--CCchhhHHHHHHHcCCccEEEecchHHHHHHHhhhhcCcccCCCCCCce
Q 012412 91 RFWQIGPQTLTELVEKMNGSDSPVDCIVY--DSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNEI 168 (464)
Q Consensus 91 ~~~~~~~~~l~~~~~~l~~~~~p~DlVI~--D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 168 (464)
... ..+.+++++. +| |+|++ |..+.++..+|..+|||++.+...
T Consensus 81 ~~~----~~l~~~l~~~----kP-D~Vlv~gd~~~~~aalaA~~~~IPv~h~eag------------------------- 126 (385)
T 4hwg_A 81 LVI----EKVDEVLEKE----KP-DAVLFYGDTNSCLSAIAAKRRKIPIFHMEAG------------------------- 126 (385)
T ss_dssp HHH----HHHHHHHHHH----CC-SEEEEESCSGGGGGHHHHHHTTCCEEEESCC-------------------------
T ss_pred HHH----HHHHHHHHhc----CC-cEEEEECCchHHHHHHHHHHhCCCEEEEeCC-------------------------
Confidence 222 2344555554 56 99987 334444488999999997654221
Q ss_pred eCCCCCCCCCCCCCCccccCCCCc-hHHHHHHHHHhhhccCCcEEEecchhhhhHHHHHHHHhc-C--CeeeecccCCCc
Q 012412 169 LLPGMPPLEPQDMPSFIHDLGSYP-AVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKT-W--SLRTIGPTIPSF 244 (464)
Q Consensus 169 ~~p~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~-~--~~~~vgp~~~~~ 244 (464)
+.... ...+ ...+.+. . .-++..++.+....+. +...- . ++..+|....+.
T Consensus 127 ----lrs~~-----------~~~pee~nR~~~----~--~~a~~~~~~te~~~~~----l~~~G~~~~~I~vtGnp~~D~ 181 (385)
T 4hwg_A 127 ----NRCFD-----------QRVPEEINRKII----D--HISDVNITLTEHARRY----LIAEGLPAELTFKSGSHMPEV 181 (385)
T ss_dssp ----CCCSC-----------TTSTHHHHHHHH----H--HHCSEEEESSHHHHHH----HHHTTCCGGGEEECCCSHHHH
T ss_pred ----Ccccc-----------ccCcHHHHHHHH----H--hhhceeecCCHHHHHH----HHHcCCCcCcEEEECCchHHH
Confidence 10000 0011 1222222 1 2234566666432221 11111 1 366777321110
Q ss_pred cccccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccC-CHHHHHHHHHHHhhC----CCeEEEEEcCccc
Q 012412 245 YLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVEL-KAEEMEELAWGLKSS----DQHFLWVVRESEQ 319 (464)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~-~~~~~~~~~~al~~~----~~~~i~~~~~~~~ 319 (464)
... . ......+++.+.++-. +++.|+++.|...+. ..+.+..++++++++ +.++++..++..
T Consensus 182 ~~~---~--------~~~~~~~~~~~~lgl~-~~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p~~- 248 (385)
T 4hwg_A 182 LDR---F--------MPKILKSDILDKLSLT-PKQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHPRT- 248 (385)
T ss_dssp HHH---H--------HHHHHHCCHHHHTTCC-TTSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECHHH-
T ss_pred HHH---h--------hhhcchhHHHHHcCCC-cCCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECChHH-
Confidence 000 0 0000012233334432 356888888875432 235566677766543 567777665321
Q ss_pred CcCChhhhhh---ccCCCcEEEEeccCh---HHhhccccccceeccCChhHHHHHHHhCCcEeccCCccchhhHHHHHHh
Q 012412 320 AKLPKKFSDE---TLTSHKSLVVSWCPQ---LEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILD 393 (464)
Q Consensus 320 ~~~~~~~~~~---~~~~~nv~~~~~~p~---~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~ 393 (464)
.+.+.+. ....+|+++.+.+++ ..+++.+++ +|+-.|. ...||.++|+|+|+++...+-+. +.+
T Consensus 249 ---~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adl--vvt~SGg-v~~EA~alG~Pvv~~~~~ter~e----~v~ 318 (385)
T 4hwg_A 249 ---KKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFC--ILSDSGT-ITEEASILNLPALNIREAHERPE----GMD 318 (385)
T ss_dssp ---HHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCSE--EEECCTT-HHHHHHHTTCCEEECSSSCSCTH----HHH
T ss_pred ---HHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcE--EEECCcc-HHHHHHHcCCCEEEcCCCccchh----hhh
Confidence 1111111 112468998766654 489999999 9998776 46999999999999986543121 356
Q ss_pred HhcceeeccCcCHHHHHHHHHHHhcCC
Q 012412 394 VWKTGLKFPIVKRDAIADCISEILEGE 420 (464)
Q Consensus 394 ~~G~g~~l~~~~~~~l~~~i~~ll~~~ 420 (464)
. |.++.+. .+.++|.+++.++|+|+
T Consensus 319 ~-G~~~lv~-~d~~~i~~ai~~ll~d~ 343 (385)
T 4hwg_A 319 A-GTLIMSG-FKAERVLQAVKTITEEH 343 (385)
T ss_dssp H-TCCEECC-SSHHHHHHHHHHHHTTC
T ss_pred c-CceEEcC-CCHHHHHHHHHHHHhCh
Confidence 7 8776654 47999999999999886
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* | Back alignment and structure |
|---|
Probab=99.11 E-value=2.9e-09 Score=111.53 Aligned_cols=134 Identities=15% Similarity=0.157 Sum_probs=85.4
Q ss_pred CceEEEEecccccCCHHHHHHHHHHHhhC-----CCeEEEEEcCcccCc-------CC---hhhhhhccCCCcEEEEec-
Q 012412 278 ESVVYVSYGSFVELKAEEMEELAWGLKSS-----DQHFLWVVRESEQAK-------LP---KKFSDETLTSHKSLVVSW- 341 (464)
Q Consensus 278 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~~-------~~---~~~~~~~~~~~nv~~~~~- 341 (464)
+..+++..|.+. +.+-+..+++|++.+ +.+++++.++..... .. .++.+++.+.++|.+.++
T Consensus 571 ~~~vIl~vGRl~--~~KGid~LIeA~~~L~~~~~~v~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~flG~~ 648 (816)
T 3s28_A 571 KKPILFTMARLD--RVKNLSGLVEWYGKNTRLRELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQ 648 (816)
T ss_dssp TSCEEEEECCCC--TTTTHHHHHHHHHHCHHHHHHCEEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEECCC
T ss_pred CCeEEEEEccCc--ccCCHHHHHHHHHHHHhhCCCeEEEEEeCCCcccccchhhHHHHHHHHHHHHHcCCCCcEEEccCc
Confidence 446788888876 334455556665544 345555544331000 00 112223335689999984
Q ss_pred ---cChHHhhc----cccccceecc----CChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHH
Q 012412 342 ---CPQLEVLA----HEATGCFVTH----CGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIA 410 (464)
Q Consensus 342 ---~p~~~ll~----~~~~~~vI~H----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~ 410 (464)
+|+.++.. .+++ +|.- |-..++.||+++|+|+|+. |.......+++. +.|..++..+.++++
T Consensus 649 ~~~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIas----d~GG~~EiV~dg-~~Gllv~p~D~e~LA 721 (816)
T 3s28_A 649 MDRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVHG-KSGFHIDPYHGDQAA 721 (816)
T ss_dssp CCHHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEE----SSBTHHHHCCBT-TTBEEECTTSHHHHH
T ss_pred cccCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEe----CCCChHHHHccC-CcEEEeCCCCHHHHH
Confidence 44454443 5677 7732 3346889999999999985 455667777777 789888867899999
Q ss_pred HHHHHHh----cCC
Q 012412 411 DCISEIL----EGE 420 (464)
Q Consensus 411 ~~i~~ll----~~~ 420 (464)
++|.+++ .|+
T Consensus 722 ~aI~~lL~~Ll~d~ 735 (816)
T 3s28_A 722 DTLADFFTKCKEDP 735 (816)
T ss_dssp HHHHHHHHHHHHCT
T ss_pred HHHHHHHHHhccCH
Confidence 9997776 776
|
| >1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A | Back alignment and structure |
|---|
Probab=99.09 E-value=2.8e-08 Score=99.51 Aligned_cols=133 Identities=14% Similarity=0.084 Sum_probs=81.0
Q ss_pred ceEEEEeccccc-CCHHHHHHHHHHHhhCCCeEEEEEcCcc-cCcCChhhhhhccCCCcEE-EEeccChH--Hhhccccc
Q 012412 279 SVVYVSYGSFVE-LKAEEMEELAWGLKSSDQHFLWVVRESE-QAKLPKKFSDETLTSHKSL-VVSWCPQL--EVLAHEAT 353 (464)
Q Consensus 279 ~~v~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~nv~-~~~~~p~~--~ll~~~~~ 353 (464)
..+++..|++.. -..+.+-..+..+.+.+.+++++-.+.. ....-.++.+. .++||. +.++.... .++..+|+
T Consensus 291 ~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l~~~~~~--~~~~v~~~~g~~~~~~~~~~~~adv 368 (485)
T 1rzu_A 291 SPLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGDVALEGALLAAASR--HHGRVGVAIGYNEPLSHLMQAGCDA 368 (485)
T ss_dssp SCEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEEECBCHHHHHHHHHHHHH--TTTTEEEEESCCHHHHHHHHHHCSE
T ss_pred CeEEEEEccCccccCHHHHHHHHHHHHhcCceEEEEeCCchHHHHHHHHHHHh--CCCcEEEecCCCHHHHHHHHhcCCE
Confidence 347888898762 2333333333334334667666654321 01111122222 347887 67883332 68999999
Q ss_pred cceec----cCChhHHHHHHHhCCcEeccCCccchhhHHHHHHh---------HhcceeeccCcCHHHHHHHHHHHh---
Q 012412 354 GCFVT----HCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILD---------VWKTGLKFPIVKRDAIADCISEIL--- 417 (464)
Q Consensus 354 ~~vI~----HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~---------~~G~g~~l~~~~~~~l~~~i~~ll--- 417 (464)
+|. -|-..++.||+++|+|+|+... ......+++ . +.|..++..+.++|+++|.+++
T Consensus 369 --~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v~~~~~~~~~~~~-~~G~l~~~~d~~~la~~i~~ll~~~ 441 (485)
T 1rzu_A 369 --IIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTVIDANHAALASKA-ATGVQFSPVTLDGLKQAIRRTVRYY 441 (485)
T ss_dssp --EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCBCCHHHHHTTC-CCBEEESSCSHHHHHHHHHHHHHHH
T ss_pred --EEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhheecccccccccccC-CcceEeCCCCHHHHHHHHHHHHHHh
Confidence 773 2334689999999999998664 334443322 1 2577777668999999999999
Q ss_pred cCC
Q 012412 418 EGE 420 (464)
Q Consensus 418 ~~~ 420 (464)
+|+
T Consensus 442 ~~~ 444 (485)
T 1rzu_A 442 HDP 444 (485)
T ss_dssp TCH
T ss_pred CCH
Confidence 675
|
| >2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A | Back alignment and structure |
|---|
Probab=99.03 E-value=3.1e-07 Score=91.85 Aligned_cols=135 Identities=8% Similarity=0.018 Sum_probs=80.9
Q ss_pred CceEEEEeccccc-CCHHHHHHHHHHHhhCCCeEEEEEcCcc-cCcCChhhhhhccCCCcEE-EEeccChH--Hhhcccc
Q 012412 278 ESVVYVSYGSFVE-LKAEEMEELAWGLKSSDQHFLWVVRESE-QAKLPKKFSDETLTSHKSL-VVSWCPQL--EVLAHEA 352 (464)
Q Consensus 278 ~~~v~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~nv~-~~~~~p~~--~ll~~~~ 352 (464)
+..+++..|.+.. -..+.+-..+..+.+.+.+++++-.+.. ....-.++.+. ..++|. +.++.... .++..+|
T Consensus 291 ~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l~~~~~~--~~~~v~~~~g~~~~~~~~~~~~ad 368 (485)
T 2qzs_A 291 KVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAE--YPGQVGVQIGYHEAFSHRIMGGAD 368 (485)
T ss_dssp TSCEEEEEEEESGGGCHHHHHHHHHHHHHTTCEEEEEEEECHHHHHHHHHHHHH--STTTEEEEESCCHHHHHHHHHHCS
T ss_pred CCeEEEEeccCccccCHHHHHHHHHHHhhCCcEEEEEeCCchHHHHHHHHHHHh--CCCcEEEeCCCCHHHHHHHHHhCC
Confidence 4467778887752 2333333333333333667666554321 01111122222 347886 77884332 7899999
Q ss_pred ccceecc----CChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHh--------cceeeccCcCHHHHHHHHHHHh---
Q 012412 353 TGCFVTH----CGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVW--------KTGLKFPIVKRDAIADCISEIL--- 417 (464)
Q Consensus 353 ~~~vI~H----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~--------G~g~~l~~~~~~~l~~~i~~ll--- 417 (464)
+ +|.- |...++.||+++|+|+|+... ......+++.. +.|..++..+.++|+++|.+++
T Consensus 369 v--~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~ 442 (485)
T 2qzs_A 369 V--ILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTVSDCSLENLADGVASGFVFEDSNAWSLLRAIRRAFVLW 442 (485)
T ss_dssp E--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCBCCHHHHHTTCCCBEEECSSSHHHHHHHHHHHHHHH
T ss_pred E--EEECCccCCCcHHHHHHHHCCCCEEECCC----CCccceeccCccccccccccceEEECCCCHHHHHHHHHHHHHHc
Confidence 9 7632 334688999999999998753 33444333210 2577777678999999999999
Q ss_pred cCC
Q 012412 418 EGE 420 (464)
Q Consensus 418 ~~~ 420 (464)
.|+
T Consensus 443 ~~~ 445 (485)
T 2qzs_A 443 SRP 445 (485)
T ss_dssp TSH
T ss_pred CCH
Confidence 565
|
| >2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* | Back alignment and structure |
|---|
Probab=98.97 E-value=2e-07 Score=91.05 Aligned_cols=114 Identities=13% Similarity=0.067 Sum_probs=78.4
Q ss_pred eEEEEecccccCCHHHHHHHHHHH-hhC-CCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChH---Hhhcccccc
Q 012412 280 VVYVSYGSFVELKAEEMEELAWGL-KSS-DQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQL---EVLAHEATG 354 (464)
Q Consensus 280 ~v~vs~Gs~~~~~~~~~~~~~~al-~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~---~ll~~~~~~ 354 (464)
.+++..|++.. .... +.++ +.. +.+++++ |.+. . . .+...+||.+.+++|+. .++..+|+
T Consensus 223 ~~i~~vGrl~~-~Kg~----~~~l~~~~~~~~l~iv-G~g~---~-~----~~~l~~~V~f~G~~~~~~l~~~~~~adv- 287 (406)
T 2hy7_A 223 IHAVAVGSMLF-DPEF----FVVASKAFPQVTFHVI-GSGM---G-R----HPGYGDNVIVYGEMKHAQTIGYIKHARF- 287 (406)
T ss_dssp EEEEEECCTTB-CHHH----HHHHHHHCTTEEEEEE-SCSS---C-C----CTTCCTTEEEECCCCHHHHHHHHHTCSE-
T ss_pred cEEEEEecccc-ccCH----HHHHHHhCCCeEEEEE-eCch---H-H----hcCCCCCEEEcCCCCHHHHHHHHHhcCE-
Confidence 67788888863 2222 3333 222 3455444 4322 1 1 11156899999999865 78899999
Q ss_pred ceec---cCCh-hHHHHHH-------HhCCcEeccCCccchhhHHHHHHhHhcceee-ccCcCHHHHHHHHHHHhcCC
Q 012412 355 CFVT---HCGW-NSTMEAL-------SLGVPMVAMPQWSDQSTNAKYILDVWKTGLK-FPIVKRDAIADCISEILEGE 420 (464)
Q Consensus 355 ~vI~---HgG~-~s~~eal-------~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~-l~~~~~~~l~~~i~~ll~~~ 420 (464)
+|. +-|+ .++.||+ ++|+|+|+... +.+. ..|.. ++.-+.++|+++|.++++|+
T Consensus 288 -~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~~-~~G~l~v~~~d~~~la~ai~~ll~~~ 353 (406)
T 2hy7_A 288 -GIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVGP-YKSRFGYTPGNADSVIAAITQALEAP 353 (406)
T ss_dssp -EECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTCS-CSSEEEECTTCHHHHHHHHHHHHHCC
T ss_pred -EEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------cccC-cceEEEeCCCCHHHHHHHHHHHHhCc
Confidence 663 3344 5789999 99999998764 5555 66877 67668999999999999887
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* | Back alignment and structure |
|---|
Probab=98.93 E-value=2.4e-07 Score=90.54 Aligned_cols=133 Identities=11% Similarity=0.126 Sum_probs=82.4
Q ss_pred CceEEEEecccccCCHHHHHHHHHHHh----h-CCCeEEEEEcCcccCc--CChhh---hhhccCCCc-------EEEEe
Q 012412 278 ESVVYVSYGSFVELKAEEMEELAWGLK----S-SDQHFLWVVRESEQAK--LPKKF---SDETLTSHK-------SLVVS 340 (464)
Q Consensus 278 ~~~v~vs~Gs~~~~~~~~~~~~~~al~----~-~~~~~i~~~~~~~~~~--~~~~~---~~~~~~~~n-------v~~~~ 340 (464)
+..+++..|+... .+-+..++++++ + .+.+++++..+..... +.+.+ .+...+.++ +.+.+
T Consensus 183 ~~~~il~vGr~~~--~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g 260 (413)
T 3oy2_A 183 DDVLFLNMNRNTA--RKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNKIMINRT 260 (413)
T ss_dssp TSEEEECCSCSSG--GGTHHHHHHHHHHHHHHCTTCCEEEEEECCTTCSCCHHHHHHHHHHHHTCSCHHHHHTTEEEECS
T ss_pred CceEEEEcCCCch--hcCcHHHHHHHHHHHHhCCCcEEEEEeCCcccchhhHHHHHHHHHHHcCcccccccccceeeccC
Confidence 4578888888652 223333333333 2 3567666654432211 00222 122224454 77779
Q ss_pred ccChH---Hhhccccccceec----cCChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcc---------------e
Q 012412 341 WCPQL---EVLAHEATGCFVT----HCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKT---------------G 398 (464)
Q Consensus 341 ~~p~~---~ll~~~~~~~vI~----HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~---------------g 398 (464)
|+|+. .++..+|+ +|. -|...++.||+++|+|+|+.. -......+.+. .. |
T Consensus 261 ~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~----~~g~~e~v~~~-~~~~i~~~~~~~~~~~~G 333 (413)
T 3oy2_A 261 VLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISA----VGGADDYFSGD-CVYKIKPSAWISVDDRDG 333 (413)
T ss_dssp CCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEEC----CHHHHHHSCTT-TSEEECCCEEEECTTTCS
T ss_pred cCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcC----CCChHHHHccC-cccccccccccccccccC
Confidence 99955 78899999 763 233458999999999999855 34555555443 33 6
Q ss_pred e--eccCcCHHHHHHHHHHHhcCC
Q 012412 399 L--KFPIVKRDAIADCISEILEGE 420 (464)
Q Consensus 399 ~--~l~~~~~~~l~~~i~~ll~~~ 420 (464)
. .+...+.++|.++| ++++|+
T Consensus 334 ~~gl~~~~d~~~la~~i-~l~~~~ 356 (413)
T 3oy2_A 334 IGGIEGIIDVDDLVEAF-TFFKDE 356 (413)
T ss_dssp SCCEEEECCHHHHHHHH-HHTTSH
T ss_pred cceeeCCCCHHHHHHHH-HHhcCH
Confidence 6 66655999999999 999986
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=98.87 E-value=9.5e-09 Score=88.03 Aligned_cols=130 Identities=12% Similarity=0.201 Sum_probs=92.7
Q ss_pred eEEEEecccccCCHHHHHHHHHHHhhC-CCeEEEEEcCcccCcCChhhhh--hccCCCcEEEEeccCh---HHhhccccc
Q 012412 280 VVYVSYGSFVELKAEEMEELAWGLKSS-DQHFLWVVRESEQAKLPKKFSD--ETLTSHKSLVVSWCPQ---LEVLAHEAT 353 (464)
Q Consensus 280 ~v~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~~--~~~~~~nv~~~~~~p~---~~ll~~~~~ 353 (464)
.+++..|+.. ..+-+..++++++.+ +.+++++..+.....+. ++.+ ....++||.+.+|+++ ..++..+++
T Consensus 24 ~~i~~~G~~~--~~Kg~~~li~a~~~l~~~~l~i~G~~~~~~~l~-~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adi 100 (177)
T 2f9f_A 24 DFWLSVNRIY--PEKRIELQLEVFKKLQDEKLYIVGWFSKGDHAE-RYARKIMKIAPDNVKFLGSVSEEELIDLYSRCKG 100 (177)
T ss_dssp SCEEEECCSS--GGGTHHHHHHHHHHCTTSCEEEEBCCCTTSTHH-HHHHHHHHHSCTTEEEEESCCHHHHHHHHHHCSE
T ss_pred CEEEEEeccc--cccCHHHHHHHHHhCCCcEEEEEecCccHHHHH-HHHHhhhcccCCcEEEeCCCCHHHHHHHHHhCCE
Confidence 4667778775 334566677777776 45666554433222221 2222 2226679999999997 488999999
Q ss_pred cceec---cCCh-hHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcCC
Q 012412 354 GCFVT---HCGW-NSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGE 420 (464)
Q Consensus 354 ~~vI~---HgG~-~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~~ 420 (464)
+|. +.|+ .++.||+++|+|+|+.. ...+...+++. +.|..+ ..+.+++.++|.++++|+
T Consensus 101 --~v~ps~~e~~~~~~~Eama~G~PvI~~~----~~~~~e~i~~~-~~g~~~-~~d~~~l~~~i~~l~~~~ 163 (177)
T 2f9f_A 101 --LLCTAKDEDFGLTPIEAMASGKPVIAVN----EGGFKETVINE-KTGYLV-NADVNEIIDAMKKVSKNP 163 (177)
T ss_dssp --EEECCSSCCSCHHHHHHHHTTCCEEEES----SHHHHHHCCBT-TTEEEE-CSCHHHHHHHHHHHHHCT
T ss_pred --EEeCCCcCCCChHHHHHHHcCCcEEEeC----CCCHHHHhcCC-CccEEe-CCCHHHHHHHHHHHHhCH
Confidence 775 3344 58999999999999865 45667777777 788887 678999999999999887
|
| >2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A* | Back alignment and structure |
|---|
Probab=98.61 E-value=9.3e-06 Score=78.15 Aligned_cols=99 Identities=11% Similarity=0.185 Sum_probs=74.2
Q ss_pred CcEEEEeccChH-Hhhccccccceecc-----CChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHH
Q 012412 334 HKSLVVSWCPQL-EVLAHEATGCFVTH-----CGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRD 407 (464)
Q Consensus 334 ~nv~~~~~~p~~-~ll~~~~~~~vI~H-----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~ 407 (464)
.++.+.++.... .+++.+|+ ++.- +|..++.||+++|+|+|+-|...+.......+.+. |.++.. -+.+
T Consensus 260 ~~v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~-G~l~~~--~d~~ 334 (374)
T 2xci_A 260 GDVILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKE-GAGFEV--KNET 334 (374)
T ss_dssp SSEEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHT-TCEEEC--CSHH
T ss_pred CcEEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHC-CCEEEe--CCHH
Confidence 467777766544 89999998 6642 23478999999999999877766666666666667 877666 4789
Q ss_pred HHHHHHHHHhcCCchHHHHHHHHHHHHHHH
Q 012412 408 AIADCISEILEGERGKELRRNAGKWRKLAK 437 (464)
Q Consensus 408 ~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~ 437 (464)
+|++++.++++|+..+++.+++++..+.-.
T Consensus 335 ~La~ai~~ll~d~~r~~mg~~ar~~~~~~~ 364 (374)
T 2xci_A 335 ELVTKLTELLSVKKEIKVEEKSREIKGCYL 364 (374)
T ss_dssp HHHHHHHHHHHSCCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHhcc
Confidence 999999999987223678888887766544
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* | Back alignment and structure |
|---|
Probab=98.56 E-value=1.4e-06 Score=85.09 Aligned_cols=81 Identities=9% Similarity=0.042 Sum_probs=61.4
Q ss_pred CCCcEEEEeccChH---Hhhccccccceecc---CCh-hHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCc
Q 012412 332 TSHKSLVVSWCPQL---EVLAHEATGCFVTH---CGW-NSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIV 404 (464)
Q Consensus 332 ~~~nv~~~~~~p~~---~ll~~~~~~~vI~H---gG~-~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~ 404 (464)
..+||.+.+++|+. .++..+|+ ||.- =|. .++.||+++|+|+|+ -..+ ....+++. ..|+.++..
T Consensus 293 ~~~~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v~~~-~~G~lv~~~ 364 (413)
T 2x0d_A 293 KGIHLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLSNWH-SNIVSLEQL 364 (413)
T ss_dssp TTEEEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGGGTB-TTEEEESSC
T ss_pred CcCcEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhhhcC-CCEEEeCCC
Confidence 45789999999866 78899999 7742 244 467999999999997 2221 12334445 578877777
Q ss_pred CHHHHHHHHHHHhcCC
Q 012412 405 KRDAIADCISEILEGE 420 (464)
Q Consensus 405 ~~~~l~~~i~~ll~~~ 420 (464)
++++|+++|.++++|+
T Consensus 365 d~~~la~ai~~ll~~~ 380 (413)
T 2x0d_A 365 NPENIAETLVELCMSF 380 (413)
T ss_dssp SHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHcCH
Confidence 8999999999999886
|
| >3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* | Back alignment and structure |
|---|
Probab=98.35 E-value=0.00042 Score=69.78 Aligned_cols=132 Identities=13% Similarity=0.131 Sum_probs=81.9
Q ss_pred CceEEEEeccccc-CCHHHHHHHHHHHhhCCCeEEEEEcCcccC-cCChhhhhhccCCCcEEEEeccChH---Hhhcccc
Q 012412 278 ESVVYVSYGSFVE-LKAEEMEELAWGLKSSDQHFLWVVRESEQA-KLPKKFSDETLTSHKSLVVSWCPQL---EVLAHEA 352 (464)
Q Consensus 278 ~~~v~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~nv~~~~~~p~~---~ll~~~~ 352 (464)
+.++++..|.... -..+.+-..+..+.+.+.++++...+.... ..-...... .+.++.+....+.. .+++.+|
T Consensus 326 ~~p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~~l~l~G~G~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~aD 403 (536)
T 3vue_A 326 KIPLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKKKFEKLLKSMEEK--YPGKVRAVVKFNAPLAHLIMAGAD 403 (536)
T ss_dssp TSCEEEEECCBSGGGCHHHHHHHHHHHTTSSCEEEEECCBCHHHHHHHHHHHHH--STTTEEEECSCCHHHHHHHHHHCS
T ss_pred CCcEEEEEeeccccCChHHHHHHHHHhHhhCCeEEEEeccCchHHHHHHHHHhh--cCCceEEEEeccHHHHHHHHHhhh
Confidence 4457777888762 233443333333444466776655443111 011112222 57899998877764 6788999
Q ss_pred ccceecc---CCh-hHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeec----------cCcCHHHHHHHHHHHhc
Q 012412 353 TGCFVTH---CGW-NSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKF----------PIVKRDAIADCISEILE 418 (464)
Q Consensus 353 ~~~vI~H---gG~-~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l----------~~~~~~~l~~~i~~ll~ 418 (464)
+ ||.- =|+ .+++||+++|+|+|+.. .......+++. .-|... +..+.++|+++|+++|.
T Consensus 404 ~--~v~PS~~E~fgl~~lEAma~G~PvI~s~----~gG~~e~V~dg-~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~ 476 (536)
T 3vue_A 404 V--LAVPSRFEPCGLIQLQGMRYGTPCACAS----TGGLVDTVIEG-KTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIK 476 (536)
T ss_dssp E--EEECCSCCSSCSHHHHHHHTTCCEEECS----CTHHHHHCCBT-TTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHH
T ss_pred e--eecccccCCCCHHHHHHHHcCCCEEEcC----CCCchheeeCC-CCccccccCCCceeEECCCCHHHHHHHHHHHHH
Confidence 9 7742 244 47899999999999755 45566666665 555532 24567899999998875
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=98.27 E-value=3.4e-06 Score=70.86 Aligned_cols=141 Identities=17% Similarity=0.231 Sum_probs=83.9
Q ss_pred ceEEEEecccccCCHHHHHHHHHHHhhCC----CeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChH---Hhhccc
Q 012412 279 SVVYVSYGSFVELKAEEMEELAWGLKSSD----QHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQL---EVLAHE 351 (464)
Q Consensus 279 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~~----~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~---~ll~~~ 351 (464)
+++++..|+.. +.+-...++++++.+. .+++++..+.....+ ..+.+. ...++.+ +|+|+. .++..+
T Consensus 2 ~~~i~~~G~~~--~~Kg~~~li~a~~~l~~~~~~~l~i~G~g~~~~~~-~~~~~~--~~~~v~~-g~~~~~~~~~~~~~a 75 (166)
T 3qhp_A 2 PFKIAMVGRYS--NEKNQSVLIKAVALSKYKQDIVLLLKGKGPDEKKI-KLLAQK--LGVKAEF-GFVNSNELLEILKTC 75 (166)
T ss_dssp CEEEEEESCCS--TTTTHHHHHHHHHTCTTGGGEEEEEECCSTTHHHH-HHHHHH--HTCEEEC-CCCCHHHHHHHHTTC
T ss_pred ceEEEEEeccc--hhcCHHHHHHHHHHhccCCCeEEEEEeCCccHHHH-HHHHHH--cCCeEEE-eecCHHHHHHHHHhC
Confidence 57888888875 3345566666666552 344333222211111 112222 2338888 999865 789999
Q ss_pred cccceec----cCChhHHHHHHHhCC-cEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcCCc-hHHH
Q 012412 352 ATGCFVT----HCGWNSTMEALSLGV-PMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGER-GKEL 425 (464)
Q Consensus 352 ~~~~vI~----HgG~~s~~eal~~Gv-P~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~~~-~~~~ 425 (464)
|+ +|. -|...++.||+++|+ |+|+... .......+.+. +. .+...+.+++.++|.++++|++ .+++
T Consensus 76 dv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~---~~~~~~~~~~~-~~--~~~~~~~~~l~~~i~~l~~~~~~~~~~ 147 (166)
T 3qhp_A 76 TL--YVHAANVESEAIACLEAISVGIVPVIANSP---LSATRQFALDE-RS--LFEPNNAKDLSAKIDWWLENKLERERM 147 (166)
T ss_dssp SE--EEECCCSCCCCHHHHHHHHTTCCEEEECCT---TCGGGGGCSSG-GG--EECTTCHHHHHHHHHHHHHCHHHHHHH
T ss_pred CE--EEECCcccCccHHHHHHHhcCCCcEEeeCC---CCchhhhccCC-ce--EEcCCCHHHHHHHHHHHHhCHHHHHHH
Confidence 99 774 233468999999997 9998332 11222222333 33 3335689999999999999862 1234
Q ss_pred HHHHHHHH
Q 012412 426 RRNAGKWR 433 (464)
Q Consensus 426 ~~~a~~l~ 433 (464)
.+++++..
T Consensus 148 ~~~~~~~~ 155 (166)
T 3qhp_A 148 QNEYAKSA 155 (166)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 44444433
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=98.24 E-value=3.7e-05 Score=78.31 Aligned_cols=134 Identities=12% Similarity=0.138 Sum_probs=84.1
Q ss_pred eEEEEecccc-cCCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhh---hhccCC-CcEEEEeccChH---Hhhccc
Q 012412 280 VVYVSYGSFV-ELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFS---DETLTS-HKSLVVSWCPQL---EVLAHE 351 (464)
Q Consensus 280 ~v~vs~Gs~~-~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~---~~~~~~-~nv~~~~~~p~~---~ll~~~ 351 (464)
+|+ ..|... .....+++.+...+++.+.-.++.+|++ ....+.+. ....+. ++|.+.+++|+. .++..+
T Consensus 378 ~v~-~~g~~~~K~~~~li~a~~~l~~~~~~~~l~i~G~~--g~~~~~l~~~~~~~~l~~~~v~~~g~~~~~~~~~~~~~a 454 (568)
T 2vsy_A 378 VVL-CCFNNSYKLNPQSMARMLAVLREVPDSVLWLLSGP--GEADARLRAFAHAQGVDAQRLVFMPKLPHPQYLARYRHA 454 (568)
T ss_dssp CEE-EECCCGGGCCHHHHHHHHHHHHHCTTCEEEEECCS--TTHHHHHHHHHHHTTCCGGGEEEECCCCHHHHHHHGGGC
T ss_pred EEE-EeCCccccCCHHHHHHHHHHHHhCCCcEEEEecCC--HHHHHHHHHHHHHcCCChhHEEeeCCCCHHHHHHHHhcC
Confidence 444 455554 3344555555554455443334445522 11122222 222244 899999999854 779999
Q ss_pred ccccee---ccCChhHHHHHHHhCCcEeccCCccc-hhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcCC
Q 012412 352 ATGCFV---THCGWNSTMEALSLGVPMVAMPQWSD-QSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGE 420 (464)
Q Consensus 352 ~~~~vI---~HgG~~s~~eal~~GvP~v~~P~~~D-Q~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~~ 420 (464)
|+ +| ..|+..++.||+++|+|+|++|-..= -...+..+... |+...+.+ +.+++.+++.++++|+
T Consensus 455 dv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~-g~~e~v~~-~~~~la~~i~~l~~~~ 523 (568)
T 2vsy_A 455 DL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLNHHL-GLDEMNVA-DDAAFVAKAVALASDP 523 (568)
T ss_dssp SE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHHH-TCGGGBCS-SHHHHHHHHHHHHHCH
T ss_pred CE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHHC-CChhhhcC-CHHHHHHHHHHHhcCH
Confidence 99 76 23666788999999999999774321 11224566677 77665544 8999999999999986
|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=98.21 E-value=3.3e-05 Score=66.92 Aligned_cols=131 Identities=15% Similarity=0.124 Sum_probs=83.2
Q ss_pred eEEEEecccc-c-CCHHHHHHHHHHHh---hC-CCeEEEEEcCcccCcCChhhhhhccCCCcEEE-EeccChH---Hhhc
Q 012412 280 VVYVSYGSFV-E-LKAEEMEELAWGLK---SS-DQHFLWVVRESEQAKLPKKFSDETLTSHKSLV-VSWCPQL---EVLA 349 (464)
Q Consensus 280 ~v~vs~Gs~~-~-~~~~~~~~~~~al~---~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~-~~~~p~~---~ll~ 349 (464)
.+++..|+.. . -..+.+-..+..+. +. +.+++++ |... ....+.+.+.....+||.+ .+++++. .++.
T Consensus 37 ~~i~~~G~~~~~~K~~~~li~a~~~l~~~~~~~~~~l~i~-G~~~-~~~~~~l~~~~~~~~~v~~~~g~~~~~~~~~~~~ 114 (200)
T 2bfw_A 37 VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIII-GKGD-PELEGWARSLEEKHGNVKVITEMLSREFVRELYG 114 (200)
T ss_dssp EEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEE-CCBC-HHHHHHHHHHHHHCTTEEEECSCCCHHHHHHHHT
T ss_pred CEEEEeeccccccCCHHHHHHHHHHHHhhccCCCeEEEEE-CCCC-hHHHHHHHHHHHhcCCEEEEeccCCHHHHHHHHH
Confidence 3777888876 3 23444444444442 22 3444444 3321 0011222221111129999 9999854 8899
Q ss_pred cccccceeccC---C-hhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhc-CC
Q 012412 350 HEATGCFVTHC---G-WNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILE-GE 420 (464)
Q Consensus 350 ~~~~~~vI~Hg---G-~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~-~~ 420 (464)
.+++ +|.-. | ..++.||+++|+|+|+.. -......+ .. +.|..++..+.+++.++|.++++ |+
T Consensus 115 ~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~----~~~~~e~~-~~-~~g~~~~~~~~~~l~~~i~~l~~~~~ 182 (200)
T 2bfw_A 115 SVDF--VIIPSYFEPFGLVALEAMCLGAIPIASA----VGGLRDII-TN-ETGILVKAGDPGELANAILKALELSR 182 (200)
T ss_dssp TCSE--EEECCSCCSSCHHHHHHHHTTCEEEEES----CHHHHHHC-CT-TTCEEECTTCHHHHHHHHHHHHHCCH
T ss_pred HCCE--EEECCCCCCccHHHHHHHHCCCCEEEeC----CCChHHHc-CC-CceEEecCCCHHHHHHHHHHHHhcCH
Confidence 9999 77422 3 467899999999999865 34556666 66 77888876689999999999998 86
|
| >1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7 | Back alignment and structure |
|---|
Probab=98.05 E-value=0.00058 Score=64.69 Aligned_cols=103 Identities=12% Similarity=-0.005 Sum_probs=67.4
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhC--CCeEEEEeCcccccccccCCCCCCc-eEEEccCCCCCCCCCCccCHHHHHH
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHK--GIKVTLVTTRFFYKSLHRDSSSSSI-PLEAISDGYDEGGYAQAESIEAYLE 90 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~r--Gh~V~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~ 90 (464)
||||++...+.|++.-+.++.++|+++ +.+|++++.+...+.+. ....+ .++.++. .. ...
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~---~~p~i~~v~~~~~--~~----~~~------- 64 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLS---RMPEVNEAIPMPL--GH----GAL------- 64 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHT---TCTTEEEEEEC--------------------
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHh---cCCccCEEEEecC--Cc----ccc-------
Confidence 589999999889999999999999987 99999999987776665 12233 3333331 10 000
Q ss_pred HHHHhCcHHHHHHHHHhcCCCCCccEEEeCCchhhHHHHHHHcCCccEE
Q 012412 91 RFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAP 139 (464)
Q Consensus 91 ~~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~~~~~~~A~~~giP~v~ 139 (464)
....+..+.+.+.+ .+||+||.-........++...|+|..+
T Consensus 65 -----~~~~~~~l~~~l~~--~~~D~vid~~~~~~sa~~~~~~~~~~~i 106 (348)
T 1psw_A 65 -----EIGERRKLGHSLRE--KRYDRAYVLPNSFKSALVPLFAGIPHRT 106 (348)
T ss_dssp -----CHHHHHHHHHHTTT--TTCSEEEECSCCSGGGHHHHHTTCSEEE
T ss_pred -----chHHHHHHHHHHHh--cCCCEEEECCCChHHHHHHHHhCCCEEe
Confidence 11223456666665 3479999432334456678888999743
|
| >3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A | Back alignment and structure |
|---|
Probab=98.02 E-value=7.5e-05 Score=74.93 Aligned_cols=139 Identities=12% Similarity=0.076 Sum_probs=95.4
Q ss_pred CceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEE--EcCcc--cCcCChhhhhhccCCCcEEEEeccChHH---hhcc
Q 012412 278 ESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWV--VRESE--QAKLPKKFSDETLTSHKSLVVSWCPQLE---VLAH 350 (464)
Q Consensus 278 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~--~~~~~--~~~~~~~~~~~~~~~~nv~~~~~~p~~~---ll~~ 350 (464)
..++|.+|+......++.++...+.+++.+..++|. .+... ...+...+. +..+.+++.+.+.+|+.+ .+..
T Consensus 440 G~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~g~~~~~~~~~~-~~GI~~Rv~F~g~~p~~e~la~y~~ 518 (631)
T 3q3e_A 440 EVVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSNGITHPYVERFI-KSYLGDSATAHPHSPYHQYLRILHN 518 (631)
T ss_dssp SEEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCCGGGHHHHHHHH-HHHHGGGEEEECCCCHHHHHHHHHT
T ss_pred CeEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCchhhHHHHHHHH-HcCCCccEEEcCCCCHHHHHHHHhc
Confidence 358899998887788999999999999988777764 33211 111111111 112457899999998764 5588
Q ss_pred cccccee---ccCChhHHHHHHHhCCcEeccCCcc-chhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcCC
Q 012412 351 EATGCFV---THCGWNSTMEALSLGVPMVAMPQWS-DQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGE 420 (464)
Q Consensus 351 ~~~~~vI---~HgG~~s~~eal~~GvP~v~~P~~~-DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~~ 420 (464)
+|+ ++ ..+|..|++|||++|||+|.++-.. -...-+..+... |+...+-.-+.++..+...++..|+
T Consensus 519 aDI--fLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~~-GLpE~LIA~d~eeYv~~Av~La~D~ 589 (631)
T 3q3e_A 519 CDM--MVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKRL-GLPEWLIANTVDEYVERAVRLAENH 589 (631)
T ss_dssp CSE--EECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHHT-TCCGGGEESSHHHHHHHHHHHHHCH
T ss_pred CcE--EEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHhc-CCCcceecCCHHHHHHHHHHHhCCH
Confidence 998 76 4478899999999999999988432 122233445556 6654322346888999999999996
|
| >3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* | Back alignment and structure |
|---|
Probab=97.94 E-value=2.9e-05 Score=73.23 Aligned_cols=147 Identities=12% Similarity=0.050 Sum_probs=99.7
Q ss_pred ceEEEEecccccCCHHHHHHHHHHHhh--CCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChHHh---hccccc
Q 012412 279 SVVYVSYGSFVELKAEEMEELAWGLKS--SDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEV---LAHEAT 353 (464)
Q Consensus 279 ~~v~vs~Gs~~~~~~~~~~~~~~al~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~l---l~~~~~ 353 (464)
+.+++..|+... .+.+.. .+.+++++-.+.. . + .+ ||.+.+|+|+.++ +..++.
T Consensus 178 ~~~i~yaG~l~k---------~~~L~~l~~~~~f~ivG~G~~-~---~-------l~-nV~f~G~~~~~el~~~l~~~~~ 236 (339)
T 3rhz_A 178 KREIHFPGNPER---------FSFVKEWKYDIPLKVYTWQNV-E---L-------PQ-NVHKINYRPDEQLLMEMSQGGF 236 (339)
T ss_dssp EEEEEECSCTTT---------CGGGGGCCCSSCEEEEESCCC-C---C-------CT-TEEEEECCCHHHHHHHHHTEEE
T ss_pred CcEEEEeCCcch---------hhHHHhCCCCCeEEEEeCCcc-c---C-------cC-CEEEeCCCCHHHHHHHHHhCCE
Confidence 457788888863 122332 3556655543321 1 1 45 9999999999854 555566
Q ss_pred cceeccCCh---------hHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcCCchHH
Q 012412 354 GCFVTHCGW---------NSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGERGKE 424 (464)
Q Consensus 354 ~~vI~HgG~---------~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~~~~~~ 424 (464)
+++..-+.. +-+.|++++|+|+|+.+ ...++..+++. |+|...+ +.+++.+++..+..+ +.++
T Consensus 237 ~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v~~~-~~G~~~~--~~~e~~~~i~~l~~~-~~~~ 308 (339)
T 3rhz_A 237 GLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELIENN-GLGWIVK--DVEEAIMKVKNVNED-EYIE 308 (339)
T ss_dssp EECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHHHHH-TCEEEES--SHHHHHHHHHHCCHH-HHHH
T ss_pred EEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHHHhC-CeEEEeC--CHHHHHHHHHHhCHH-HHHH
Confidence 555533322 35789999999999754 67888999999 9999996 568888888886533 3467
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 012412 425 LRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLA 458 (464)
Q Consensus 425 ~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l~ 458 (464)
+++|+++.+++++. |--....+.+.+..|.
T Consensus 309 m~~na~~~a~~~~~----~~f~k~~l~~~~~~~~ 338 (339)
T 3rhz_A 309 LVKNVRSFNPILRK----GFFTRRLLTESVFQAI 338 (339)
T ss_dssp HHHHHHHHTHHHHT----THHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhc----cHHHHHHHHHHHHHhc
Confidence 89999999888873 3444556666655554
|
| >3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula} | Back alignment and structure |
|---|
Probab=97.93 E-value=0.00068 Score=64.30 Aligned_cols=306 Identities=12% Similarity=0.093 Sum_probs=162.9
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhC--CCeEEEEeCcccccccccCCCCCCce-EEEccCCCCCCCCCCccCHHH
Q 012412 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHK--GIKVTLVTTRFFYKSLHRDSSSSSIP-LEAISDGYDEGGYAQAESIEA 87 (464)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~r--Gh~V~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~ 87 (464)
...+|||++...+.|++.-+.++.++|+++ +.+|++++.+.+.+.+.. ...+. ++.++.. . ...
T Consensus 6 l~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~---~p~vd~vi~~~~~-------~---~~~ 72 (349)
T 3tov_A 6 LDYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEY---NPNIDELIVVDKK-------G---RHN 72 (349)
T ss_dssp CTTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSS---CTTCSEEEEECCS-------S---HHH
T ss_pred CCCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhc---CCCccEEEEeCcc-------c---ccc
Confidence 456799999999999999999999999987 999999999988887772 33443 4444421 0 011
Q ss_pred HHHHHHHhCcHHHHHHHHHhcCCCCCc-cEEEeCCchhhHHHHHHHcCCccEEEecchHHHHHHHhhhhcCcccCCCCCC
Q 012412 88 YLERFWQIGPQTLTELVEKMNGSDSPV-DCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGN 166 (464)
Q Consensus 88 ~~~~~~~~~~~~l~~~~~~l~~~~~p~-DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 166 (464)
.+. .+..+++++.. +.| |++|.-....-...++...|+|..+=...... ..+++..
T Consensus 73 ~~~--------~~~~l~~~Lr~--~~y~D~vidl~~~~rs~~l~~~~~a~~riG~~~~~~-----~~~~~~~-------- 129 (349)
T 3tov_A 73 SIS--------GLNEVAREINA--KGKTDIVINLHPNERTSYLAWKIHAPITTGMSHFLF-----RPFMTKY-------- 129 (349)
T ss_dssp HHH--------HHHHHHHHHHH--HCCCCEEEECCCSHHHHHHHHHHCCSEEEECCCTTT-----GGGCSEE--------
T ss_pred cHH--------HHHHHHHHHhh--CCCCeEEEECCCChHHHHHHHHhCCCeEEecCCCCc-----ccccccc--------
Confidence 111 12234444443 348 99997555555667888899996542111000 0000000
Q ss_pred ceeCCCCCCCCCCCCCCccccCCCCchHHHHHHHHHhhhccCCcEEEecchhhhhHHHHHHHHhcCCeeeecccCCCccc
Q 012412 167 EILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTWSLRTIGPTIPSFYL 246 (464)
Q Consensus 167 ~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~vgp~~~~~~~ 246 (464)
.+ . ...... . .+. +...+.. .|.-...
T Consensus 130 ---~~-------------~-~~~~~h-~-------------------------v~r-~~~ll~~------lg~~~~~--- 156 (349)
T 3tov_A 130 ---TR-------------L-DRKTRH-A-------------------------ADM-YINVLEQ------LGVTDTS--- 156 (349)
T ss_dssp ---CC-------------C-CTTTSC-H-------------------------HHH-HHHHHHH------TTCCCCC---
T ss_pred ---cc-------------C-CCCCcc-H-------------------------HHH-HHHHHHH------hCCCccC---
Confidence 00 0 000000 0 010 1111111 1100000
Q ss_pred cccccCccccccccccc--chhHHHHHhhc---CCCCceEEEEecccc---cCCHHHHHHHHHHHhhCCCeEEEEEcCcc
Q 012412 247 DKQIEDDKDYGFSMFKS--STEACMKWLND---RAKESVVYVSYGSFV---ELKAEEMEELAWGLKSSDQHFLWVVRESE 318 (464)
Q Consensus 247 ~~~~~~~~~~~~~~~~~--~~~~~~~~l~~---~~~~~~v~vs~Gs~~---~~~~~~~~~~~~al~~~~~~~i~~~~~~~ 318 (464)
.....++.+ ..+...+++.. .++++.|.+..|+.. ..+.+.+.++++.+.+.+.++++ +++..
T Consensus 157 --------~~~~~l~~~~~~~~~~~~~l~~~g~~~~~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl-~g~~~ 227 (349)
T 3tov_A 157 --------NSGLHIEICEEWRCQAQEFYSSHGLTDTDILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVF-FGGPM 227 (349)
T ss_dssp --------CCCCCCCCCHHHHHHHHHHHHHTTCCTTCCEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEE-CCCTT
T ss_pred --------CCceeeeCCHHHHHHHHHHHHHcCCCCCCCEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEE-EeCcc
Confidence 000000001 11223344432 235678999988853 56889999999988766888876 44432
Q ss_pred cCcCChhhhhhccCCCcE-EEEecc--C-hHHhhccccccceeccCChhHHHHHHHhCCcEecc--CCc-------cch-
Q 012412 319 QAKLPKKFSDETLTSHKS-LVVSWC--P-QLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAM--PQW-------SDQ- 384 (464)
Q Consensus 319 ~~~~~~~~~~~~~~~~nv-~~~~~~--p-~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~--P~~-------~DQ- 384 (464)
.....+++.+. .+.++ .+.+-. . ..+++.++++ +|+. -.|+++-|.+.|+|+|++ |.. .++
T Consensus 228 e~~~~~~i~~~--~~~~~~~l~g~~sl~e~~ali~~a~~--~i~~-DsG~~HlAaa~g~P~v~lfg~t~p~~~~P~~~~~ 302 (349)
T 3tov_A 228 DLEMVQPVVEQ--METKPIVATGKFQLGPLAAAMNRCNL--LITN-DSGPMHVGISQGVPIVALYGPSNPFFYGPYQAHA 302 (349)
T ss_dssp THHHHHHHHHT--CSSCCEECTTCCCHHHHHHHHHTCSE--EEEE-SSHHHHHHHTTTCCEEEECSSCCHHHHSCTTCSE
T ss_pred hHHHHHHHHHh--cccccEEeeCCCCHHHHHHHHHhCCE--EEEC-CCCHHHHHHhcCCCEEEEECCCCccccCCCCCCe
Confidence 22222333332 23333 222222 2 3389999999 9998 456666699999999984 111 010
Q ss_pred ----hhHHHHHHhH--hcce----eeccCcCHHHHHHHHHHHhcC
Q 012412 385 ----STNAKYILDV--WKTG----LKFPIVKRDAIADCISEILEG 419 (464)
Q Consensus 385 ----~~na~rl~~~--~G~g----~~l~~~~~~~l~~~i~~ll~~ 419 (464)
.....++... ..+. ..+...+++++.++++++|..
T Consensus 303 ~vl~~~~~C~C~~~~~~~C~~~~~~Cm~~I~~~~V~~a~~~lL~~ 347 (349)
T 3tov_A 303 IVLETMDSYEIGKSMKKIIKEGNYKGLSVISEEQVIKAAETLLLE 347 (349)
T ss_dssp EEECHHHHHHHHHHTTCCCCGGGCSTTTTSCHHHHHHHHHHHHHH
T ss_pred EEEeCCCCcCccCCccCCCCCCccchhhcCCHHHHHHHHHHHHhh
Confidence 0111112221 0221 112278999999999988853
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=97.91 E-value=0.00052 Score=71.63 Aligned_cols=141 Identities=16% Similarity=0.222 Sum_probs=99.6
Q ss_pred CCCceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEEcCcccC--cCChhhhhhccCCCcEEEEeccChH---Hhhcc
Q 012412 276 AKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQA--KLPKKFSDETLTSHKSLVVSWCPQL---EVLAH 350 (464)
Q Consensus 276 ~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~nv~~~~~~p~~---~ll~~ 350 (464)
+++.+||.+|.......++.+..-.+.|++.+.-++|........ .+...+......++++.+.+..|.. ..+..
T Consensus 520 p~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~~~~l~~~~~~~gi~~~r~~f~~~~~~~~~l~~~~~ 599 (723)
T 4gyw_A 520 PEDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEPNIQQYAQNMGLPQNRIIFSPVAPKEEHVRRGQL 599 (723)
T ss_dssp CTTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGGGHHHHHHHHHHTTCCGGGEEEEECCCHHHHHHHGGG
T ss_pred CCCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHHHHHHHhcCCCcCeEEECCCCCHHHHHHHhCC
Confidence 345699999988888899999999999999999888887553211 1111122211145789999988866 45566
Q ss_pred cccccee---ccCChhHHHHHHHhCCcEeccCCcc-chhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcCC
Q 012412 351 EATGCFV---THCGWNSTMEALSLGVPMVAMPQWS-DQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGE 420 (464)
Q Consensus 351 ~~~~~vI---~HgG~~s~~eal~~GvP~v~~P~~~-DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~~ 420 (464)
+|+ ++ ..+|.+|++|||.+|||+|.++-.. =...-+..+..+ |+...+ .-+.++..+.-.++-.|.
T Consensus 600 ~Di--~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~-gl~e~i-a~~~~~Y~~~a~~la~d~ 669 (723)
T 4gyw_A 600 ADV--CLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCL-GCLELI-AKNRQEYEDIAVKLGTDL 669 (723)
T ss_dssp CSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHH-TCGGGB-CSSHHHHHHHHHHHHHCH
T ss_pred CeE--EeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHc-CCcccc-cCCHHHHHHHHHHHhcCH
Confidence 777 76 4889999999999999999998422 233445556666 766544 346677777666777775
|
| >2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A* | Back alignment and structure |
|---|
Probab=97.31 E-value=0.0055 Score=57.31 Aligned_cols=131 Identities=14% Similarity=0.050 Sum_probs=82.2
Q ss_pred CCceEEEEecccc---cCCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEec--cCh-HHhhcc
Q 012412 277 KESVVYVSYGSFV---ELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSW--CPQ-LEVLAH 350 (464)
Q Consensus 277 ~~~~v~vs~Gs~~---~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~--~p~-~~ll~~ 350 (464)
+++.|.+..|+.. ..+.+.+.++++.|.+.+.++++..++.......+++.+. . +++.+.+- +.+ .+++.+
T Consensus 177 ~~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~~e~~~~~~i~~~--~-~~~~l~g~~sl~el~ali~~ 253 (326)
T 2gt1_A 177 AGEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPHEEERAKRLAEG--F-AYVEVLPKMSLEGVARVLAG 253 (326)
T ss_dssp TTSEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSHHHHHHHHHHHTT--C-TTEEECCCCCHHHHHHHHHT
T ss_pred CCCEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCHHHHHHHHHHHhh--C-CcccccCCCCHHHHHHHHHh
Confidence 4568888888754 5688999999998877678877654443222222233222 2 34544432 223 389999
Q ss_pred ccccceeccCChhHHHHHHHhCCcEecc--CCccchhhHHHHHHhHhcce--------eeccCcCHHHHHHHHHHHhcCC
Q 012412 351 EATGCFVTHCGWNSTMEALSLGVPMVAM--PQWSDQSTNAKYILDVWKTG--------LKFPIVKRDAIADCISEILEGE 420 (464)
Q Consensus 351 ~~~~~vI~HgG~~s~~eal~~GvP~v~~--P~~~DQ~~na~rl~~~~G~g--------~~l~~~~~~~l~~~i~~ll~~~ 420 (464)
|++ +|+.- .|+++=|.+.|+|+|++ |..... ++ = ||-. ..+...+++++.+++.++|++.
T Consensus 254 a~l--~I~~D-SG~~HlAaa~g~P~v~lfg~t~p~~--~~----P-~~~~~~~~~~~~~cm~~I~~~~V~~~i~~~l~~~ 323 (326)
T 2gt1_A 254 AKF--VVSVD-TGLSHLTAALDRPNITVYGPTDPGL--IG----G-YGKNQMVCRAPGNELSQLTANAVKQFIEENAEKA 323 (326)
T ss_dssp CSE--EEEES-SHHHHHHHHTTCCEEEEESSSCHHH--HC----C-CSSSEEEEECGGGCGGGCCHHHHHHHHHHTTTTC
T ss_pred CCE--EEecC-CcHHHHHHHcCCCEEEEECCCChhh--cC----C-CCCCceEecCCcccccCCCHHHHHHHHHHHHHHh
Confidence 999 99983 45566688899999986 321111 00 0 0111 1122789999999999999764
|
| >3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0 | Back alignment and structure |
|---|
Probab=94.66 E-value=0.082 Score=46.78 Aligned_cols=117 Identities=11% Similarity=0.075 Sum_probs=65.8
Q ss_pred CCCCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCC-CCCCceEEEccCCCCCCCCCCccCHH
Q 012412 8 PTSCKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDS-SSSSIPLEAISDGYDEGGYAQAESIE 86 (464)
Q Consensus 8 ~~~~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~ 86 (464)
+.+.++||||+..--|. +---+.+|+++|.+ +|+|+++.+...++-.-++. ....+.+..+..++ +.-..++.
T Consensus 6 ~~~~~~m~ILlTNDDGi-~apGi~aL~~~l~~-~~~V~VVAP~~~~Sg~g~siTl~~pl~~~~~~~~~----~~v~GTPa 79 (261)
T 3ty2_A 6 KTATPKLRLLLSNDDGV-YAKGLAILAKTLAD-LGEVDVVAPDRNRSGASNSLTLNAPLHIKNLENGM----ISVEGTPT 79 (261)
T ss_dssp -----CCEEEEECSSCT-TCHHHHHHHHHHTT-TSEEEEEEESSCCTTCTTCCCCSSCEEEEECTTSC----EEESSCHH
T ss_pred hccCCCCeEEEEcCCCC-CCHHHHHHHHHHHh-cCCEEEEecCCCCcCcccceecCCCeEEEEecCCe----EEECCCHH
Confidence 34566799999887776 66678899999976 89999999988776655321 22345555543221 11222222
Q ss_pred HHHHHHHHhCcHHHHHHHHHhcCCCCCccEEEeCC---------chhhHH----HHHHHcCCccEEEecc
Q 012412 87 AYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDS---------ILLWAL----DVAKKFGLLGAPFLTQ 143 (464)
Q Consensus 87 ~~~~~~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~---------~~~~~~----~~A~~~giP~v~~~~~ 143 (464)
.-...- +..+.. .+| |+||+.. ....|- .-|..+|||.|.+|..
T Consensus 80 DCV~la-----------l~~l~~-~~P-DLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~~ 136 (261)
T 3ty2_A 80 DCVHLA-----------ITGVLP-EMP-DMVVAGINAGPNLGDDVWYSGTVAAAMEGRFLGLPALAVSLG 136 (261)
T ss_dssp HHHHHH-----------TTTTSS-SCC-SEEEEEEEESCCCGGGGGTCHHHHHC-CCSTTSCCEEEEEEC
T ss_pred HHHHHH-----------HHHhcC-CCC-CEEEECCcCCCCCCCCcCCchHHHHHHHHHHcCCCeEEEEcC
Confidence 221111 122222 145 9999743 122232 2246789999998653
|
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A* | Back alignment and structure |
|---|
Probab=93.86 E-value=0.89 Score=44.64 Aligned_cols=111 Identities=14% Similarity=0.058 Sum_probs=73.3
Q ss_pred cEEEEeccChH---Hhhccccccceec---cCChhH-HHHHHHhC---CcEeccCCccchhhHHHHHHhHhcceeeccCc
Q 012412 335 KSLVVSWCPQL---EVLAHEATGCFVT---HCGWNS-TMEALSLG---VPMVAMPQWSDQSTNAKYILDVWKTGLKFPIV 404 (464)
Q Consensus 335 nv~~~~~~p~~---~ll~~~~~~~vI~---HgG~~s-~~eal~~G---vP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~ 404 (464)
.|.+.+.+|+. .++..+++ ++. .=|+|. ..||+++| .|+|+--+.+ .+.-+.+ .|+.++..
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv--~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG----a~~~l~~---~allVnP~ 423 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL--LIFNSTVDGQNLSTFEAPLVNERDADVILSETCG----AAEVLGE---YCRSVNPF 423 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE--EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBT----THHHHGG---GSEEECTT
T ss_pred CEEEeCCCCHHHHHHHHHhccE--EEECcccccCChhHHHHHHhCCCCCCEEEeCCCC----CHHHhCC---CEEEECCC
Confidence 68888888875 77888998 663 468875 59999996 6666544322 2333312 36777767
Q ss_pred CHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHhh
Q 012412 405 KRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLACS 460 (464)
Q Consensus 405 ~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l~~~ 460 (464)
+.++++++|.++|.++. ++-+++.+++.+.++ .-....-.+.+++.|...
T Consensus 424 D~~~lA~AI~~aL~m~~-~er~~r~~~~~~~V~-----~~d~~~W~~~fl~~L~~~ 473 (496)
T 3t5t_A 424 DLVEQAEAISAALAAGP-RQRAEAAARRRDAAR-----PWTLEAWVQAQLDGLAAD 473 (496)
T ss_dssp BHHHHHHHHHHHHHCCH-HHHHHHHHHHHHHHT-----TCBHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHH-----HCCHHHHHHHHHHHHhhc
Confidence 89999999999998752 133444445555544 245566677777777543
|
| >2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=93.20 E-value=1 Score=39.87 Aligned_cols=114 Identities=10% Similarity=0.111 Sum_probs=65.4
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCC-CCCCceEEEccCCCCCCCCCCccCHHHHHHH
Q 012412 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDS-SSSSIPLEAISDGYDEGGYAQAESIEAYLER 91 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 91 (464)
|.|||+..--|. +---+.+|+++|.+.| +|+++.+...++-.-++. ....+++..+..... .....++..-..
T Consensus 1 Mp~ILlTNDDGi-~apGi~~L~~~l~~~g-~V~VvAP~~~~Sg~g~siT~~~pl~~~~~~~~~~---~~v~GTPaDCV~- 74 (251)
T 2wqk_A 1 MPTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVGHSLTFTEPLKMRKIDTDFY---TVIDGTPADCVH- 74 (251)
T ss_dssp -CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCSCCCSSCEEEEEEETTEE---EETTCCHHHHHH-
T ss_pred CCEEEEEcCCCC-CcHHHHHHHHHHHhCC-CEEEEeeCCCCcccccCcCCCCCceeEEeeccce---eecCCChHHHHh-
Confidence 457887776665 4556888999999888 599999887766555332 233455555442110 011122221111
Q ss_pred HHHhCcHHHHHHHHHhcCCCCCccEEEeCC----------ch---hhHHHHHHHcCCccEEEecc
Q 012412 92 FWQIGPQTLTELVEKMNGSDSPVDCIVYDS----------IL---LWALDVAKKFGLLGAPFLTQ 143 (464)
Q Consensus 92 ~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~----------~~---~~~~~~A~~~giP~v~~~~~ 143 (464)
--+..+..+.+| |+||+.. ++ ..++.-|..+|||.|.+|..
T Consensus 75 ----------lal~~~l~~~~P-DLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S~~ 128 (251)
T 2wqk_A 75 ----------LGYRVILEEKKP-DLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSAF 128 (251)
T ss_dssp ----------HHHHTTTTTCCC-SEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEEE
T ss_pred ----------hhhhhhcCCCCC-CEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEEcc
Confidence 112233333245 9999833 22 34566678999999998753
|
| >2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A | Back alignment and structure |
|---|
Probab=92.64 E-value=1.3 Score=38.81 Aligned_cols=112 Identities=14% Similarity=0.078 Sum_probs=67.6
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccC-CCCCCceEEEccCCC---CCCCCCCccCHHHHH
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRD-SSSSSIPLEAISDGY---DEGGYAQAESIEAYL 89 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~---~~~~~~~~~~~~~~~ 89 (464)
||||+..--|. +---+.+|+++|.+.| +|+++.+...++-.-++ .....+++..++.+. ....+.-..++..-.
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~siTl~~pl~~~~~~~~~~~~~~~~~~v~GTPaDCV 78 (244)
T 2e6c_A 1 MRILVTNDDGI-YSPGLWALAEAASQFG-EVFVAAPDTEQSAAGHAITIAHPVRAYPHPSPLHAPHFPAYRVRGTPADCV 78 (244)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEECSSCCCCCSSCCCSSCBEEEECCCCTTSCCCCEEEEESCHHHHH
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccccCCCCeEEEEeccCcCCCCCceEEEcCcHHHHH
Confidence 57887766665 5556889999999888 89999998877766543 224457777765321 000122223333222
Q ss_pred HHHHHhCcHHHHHHHHHhcCCCCCccEEEeCC----------c---hhhHHHHHHHcCCccEEEec
Q 012412 90 ERFWQIGPQTLTELVEKMNGSDSPVDCIVYDS----------I---LLWALDVAKKFGLLGAPFLT 142 (464)
Q Consensus 90 ~~~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~----------~---~~~~~~~A~~~giP~v~~~~ 142 (464)
+.-. . +. .++|+||+.. + +..++.-|..+|||.|.+|.
T Consensus 79 ~lal-----------~-l~---~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 129 (244)
T 2e6c_A 79 ALGL-----------H-LF---GPVDLVLSGVNLGSNLGHEIWHSGTVAAAKQGYLFGLSAAAFSV 129 (244)
T ss_dssp HHHH-----------H-HS---CSCCEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHH-----------c-CC---CCCCEEEECCccCCCCCcCeechHhHHHHHHHHhcCCCeEEEec
Confidence 2111 1 21 2349999743 1 23345557889999999865
|
| >2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A | Back alignment and structure |
|---|
Probab=92.54 E-value=2.3 Score=35.27 Aligned_cols=133 Identities=13% Similarity=0.114 Sum_probs=71.1
Q ss_pred hHHHHHhhcCCCCceEEEEecc-cccCCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccCh
Q 012412 266 EACMKWLNDRAKESVVYVSYGS-FVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQ 344 (464)
Q Consensus 266 ~~~~~~l~~~~~~~~v~vs~Gs-~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~ 344 (464)
.++-++|.++ ....|+-|. .. .+....++..+.+.+++-+++.. ....+... -....+++..+.
T Consensus 35 ~~lg~~La~~---g~~lVsGGg~~G-----im~aa~~gAl~~gG~tigVlP~~-~~~~~~~~------~~~~i~~~~~~~ 99 (176)
T 2iz6_A 35 NELGKQIATH---GWILLTGGRSLG-----VMHEAMKGAKEAGGTTIGVLPGP-DTSEISDA------VDIPIVTGLGSA 99 (176)
T ss_dssp HHHHHHHHHT---TCEEEEECSSSS-----HHHHHHHHHHHTTCCEEEEECC------CCTT------CSEEEECCCCSS
T ss_pred HHHHHHHHHC---CCEEEECCCccC-----HhHHHHHHHHHcCCEEEEEeCch-hhhhhccC------CceeEEcCCHHH
Confidence 4555666653 256666665 33 45555665555566767666543 11121111 122344566665
Q ss_pred H-Hhh-ccccccceeccCChhHHH---HHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhc
Q 012412 345 L-EVL-AHEATGCFVTHCGWNSTM---EALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILE 418 (464)
Q Consensus 345 ~-~ll-~~~~~~~vI~HgG~~s~~---eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~ 418 (464)
. .++ ..++. .++--||+||+. |++.+++|++++|.|. .....+... -.....-.-+++++.+.+.+.+.
T Consensus 100 Rk~~m~~~sda-~IvlpGg~GTL~E~~~al~~~kpV~~l~~~~---~~~gfi~~~-~~~~i~~~~~~~e~~~~l~~~~~ 173 (176)
T 2iz6_A 100 RDNINALSSNV-LVAVGMGPGTAAEVALALKAKKPVVLLGTQP---EAEKFFTSL-DAGLVHVAADVAGAIAAVKQLLA 173 (176)
T ss_dssp SCCCCGGGCSE-EEEESCCHHHHHHHHHHHHTTCCEEEESCCH---HHHHHHHHH-CTTTEEEESSHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCE-EEEecCCccHHHHHHHHHHhCCcEEEEcCcc---cccccCChh-hcCeEEEcCCHHHHHHHHHHHHH
Confidence 5 333 34443 455678899874 5578999999999843 111122222 22222224577888877776654
|
| >1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A* | Back alignment and structure |
|---|
Probab=92.43 E-value=1.2 Score=39.22 Aligned_cols=114 Identities=10% Similarity=0.042 Sum_probs=66.3
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccC-CCCCCceEEEccCCCCCCCCCCccCHHHHHHHH
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRD-SSSSSIPLEAISDGYDEGGYAQAESIEAYLERF 92 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 92 (464)
||||+..--|. |---+.+|+++|.+.| +|+++.+...++-.-++ .....+++..+..+-....+.-..++..-.+.
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~siTl~~pl~~~~~~~~~~~~~~~v~GTPaDCV~l- 77 (247)
T 1j9j_A 1 MRILVTNDDGI-QSKGIIVLAELLSEEH-EVFVVAPDKERSATGHSITIHVPLWMKKVFISERVVAYSTTGTPADCVKL- 77 (247)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTCTTCCCCSSCCCEEECCCSSSEEEEEESSCHHHHHHH-
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccccCCCCeEEEEeccCCCCceEEECCcHHHHHHH-
Confidence 57887766665 5556889999998888 89999998877666543 22334566665432000011112222222111
Q ss_pred HHhCcHHHHHHHHHhcCCCCCccEEEeCC----------c---hhhHHHHHHHcCCccEEEec
Q 012412 93 WQIGPQTLTELVEKMNGSDSPVDCIVYDS----------I---LLWALDVAKKFGLLGAPFLT 142 (464)
Q Consensus 93 ~~~~~~~l~~~~~~l~~~~~p~DlVI~D~----------~---~~~~~~~A~~~giP~v~~~~ 142 (464)
-+..+.. .++|+||+.. + +..++.-|..+|||.|.+|.
T Consensus 78 ----------al~~l~~--~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 128 (247)
T 1j9j_A 78 ----------AYNVVMD--KRVDLIVSGVNRGPNMGMDILHSGTVSGAMEGAMMNIPSIAISS 128 (247)
T ss_dssp ----------HHHTTST--TCCSEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred ----------HHHhhcc--CCCCEEEECCccCCCCCcCeecchhHHHHHHHHhcCCCeEEEec
Confidence 1222332 2349999743 1 23345557889999999865
|
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* | Back alignment and structure |
|---|
Probab=92.35 E-value=0.78 Score=45.13 Aligned_cols=108 Identities=11% Similarity=0.052 Sum_probs=69.3
Q ss_pred cEE-EEeccChH---Hhhccccccceec---cCChh-HHHHHHHhCC-----cEeccCCcc--chhhHHHHHHhHhccee
Q 012412 335 KSL-VVSWCPQL---EVLAHEATGCFVT---HCGWN-STMEALSLGV-----PMVAMPQWS--DQSTNAKYILDVWKTGL 399 (464)
Q Consensus 335 nv~-~~~~~p~~---~ll~~~~~~~vI~---HgG~~-s~~eal~~Gv-----P~v~~P~~~--DQ~~na~rl~~~~G~g~ 399 (464)
+|. +.+++++. .++..+|+ ||. .=|+| ++.||+++|+ |+|+.-..+ ++. ..|+
T Consensus 332 ~v~~~~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~l----------~~g~ 399 (482)
T 1uqt_A 332 PLYYLNQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANEL----------TSAL 399 (482)
T ss_dssp SEEEECSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTC----------TTSE
T ss_pred eEEEeCCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCCHHHh----------CCeE
Confidence 355 45788876 67889999 663 34665 6799999998 676644332 222 2256
Q ss_pred eccCcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHhh
Q 012412 400 KFPIVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLACS 460 (464)
Q Consensus 400 ~l~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l~~~ 460 (464)
.++..+.++++++|.++|+++. +.-+++.++..+.+++ -+.....+.+++.+...
T Consensus 400 lv~p~d~~~lA~ai~~lL~~~~-~~r~~~~~~~~~~v~~-----~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 400 IVNPYDRDEVAAALDRALTMSL-AERISRHAEMLDVIVK-----NDINHWQECFISDLKQI 454 (482)
T ss_dssp EECTTCHHHHHHHHHHHHTCCH-HHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHS
T ss_pred EECCCCHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHHh-----CCHHHHHHHHHHHHHhc
Confidence 6666789999999999998641 1233333444444432 35566777777777654
|
| >1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1 | Back alignment and structure |
|---|
Probab=91.26 E-value=2.1 Score=38.35 Aligned_cols=113 Identities=13% Similarity=0.025 Sum_probs=66.5
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccC-CCCCCceEEEccCCCCCCCCCCccCHHHHHHHH
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRD-SSSSSIPLEAISDGYDEGGYAQAESIEAYLERF 92 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 92 (464)
||||+..--|. +---+.+|+++|.+.| +|+++.+...++-.-++ .....+++..++.+-.. .+.-..++..-...
T Consensus 1 M~ILlTNDDGi-~ApGi~aL~~aL~~~g-~V~VVAP~~~qSg~g~siTl~~pl~~~~~~~~~~~-~~~v~GTPaDCV~l- 76 (280)
T 1l5x_A 1 MKILVTNDDGV-HSPGLRLLYQFALSLG-DVDVVAPESPKSATGLGITLHKPLRMYEVDLCGFR-AIATSGTPSDTVYL- 76 (280)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHGGGS-EEEEEEESSCTTTSCSSCCCSSCBCEEEEECSSSE-EEEESSCHHHHHHH-
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccccCCCCeEEEEeccCCCc-eEEECCcHHHHHHH-
Confidence 57887766665 5556889999999888 99999998877666543 22344666665431001 12222222222111
Q ss_pred HHhCcHHHHHHHHHhcCCCCCccEEEeCC-----------c---hhhHHHHHHHcCCccEEEecc
Q 012412 93 WQIGPQTLTELVEKMNGSDSPVDCIVYDS-----------I---LLWALDVAKKFGLLGAPFLTQ 143 (464)
Q Consensus 93 ~~~~~~~l~~~~~~l~~~~~p~DlVI~D~-----------~---~~~~~~~A~~~giP~v~~~~~ 143 (464)
-+..+ . .++|+||+.. + +..++.-|..+|||.|.+|..
T Consensus 77 ----------al~~l-~--~~PDLVvSGIN~G~Nlg~d~v~ySGTVgAA~Ea~~~GiPaIA~S~~ 128 (280)
T 1l5x_A 77 ----------ATFGL-G--RKYDIVLSGINLGDNTSLQVILSSGTLGAAFQAALLGIPALAYSAY 128 (280)
T ss_dssp ----------HHHHH-T--SCCSEEEEEEEEBCCCSHHHHTTCHHHHHHHHHHHTTCCEEEEEEC
T ss_pred ----------HHhcC-C--CCCCEEEECCccCCcCCccccccchhHHHHHHHHHcCCCeEEEEcc
Confidence 12223 2 2349999643 1 133455578899999998763
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* | Back alignment and structure |
|---|
Probab=89.76 E-value=1.2 Score=45.40 Aligned_cols=77 Identities=14% Similarity=0.185 Sum_probs=46.8
Q ss_pred CcEEEE---eccCh---------HHhhccccccceecc---CCh-hHHHHHHHhCCcEeccCCccchhhHHHHHHh----
Q 012412 334 HKSLVV---SWCPQ---------LEVLAHEATGCFVTH---CGW-NSTMEALSLGVPMVAMPQWSDQSTNAKYILD---- 393 (464)
Q Consensus 334 ~nv~~~---~~~p~---------~~ll~~~~~~~vI~H---gG~-~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~---- 393 (464)
++|.++ .|++. .++++.|++ ||.- =|+ .+.+||+++|+|+|+.-.. .....+.+
T Consensus 490 drVKVIf~P~~L~~~d~lf~~d~~~~~~~adv--fV~PS~~EgfGl~~LEAmA~G~PvI~s~~g----G~~d~V~dg~~~ 563 (725)
T 3nb0_A 490 DRVKMIFHPEFLNANNPILGLDYDEFVRGCHL--GVFPSYYEPWGYTPAECTVMGVPSITTNVS----GFGSYMEDLIET 563 (725)
T ss_dssp CSEEEEECCSCCCTTCSSSCCCHHHHHHHCSE--EECCCSSBSSCHHHHHHHHTTCCEEEETTB----HHHHHHHTTSCH
T ss_pred CceeEEEeccccCCCCccchhHHHHHHhhceE--EEeccccCCCCHHHHHHHHcCCCEEEeCCC----Chhhhhhccccc
Confidence 455544 58765 468999999 7743 344 4789999999999975543 22222222
Q ss_pred ---Hhcceeecc---CcCHHHHHHHHHHHh
Q 012412 394 ---VWKTGLKFP---IVKRDAIADCISEIL 417 (464)
Q Consensus 394 ---~~G~g~~l~---~~~~~~l~~~i~~ll 417 (464)
. +.|+.+. ..+.+++.++|.++|
T Consensus 564 ~~~~-~tG~lV~~rd~~d~ee~aeaLa~aL 592 (725)
T 3nb0_A 564 NQAK-DYGIYIVDRRFKAPDESVEQLVDYM 592 (725)
T ss_dssp HHHH-HTTEEEECCSSSCHHHHHHHHHHHH
T ss_pred cCCC-CceEEEeCCCCCCHHHHHHHHHHHH
Confidence 2 3565552 345555555554444
|
| >2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A | Back alignment and structure |
|---|
Probab=88.50 E-value=3 Score=36.77 Aligned_cols=110 Identities=15% Similarity=0.095 Sum_probs=64.3
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCC-CCCCceEEEccCCCCCCCCCCc-cCHHHHHHH
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDS-SSSSIPLEAISDGYDEGGYAQA-ESIEAYLER 91 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~ 91 (464)
||||+..--|. |---+.+|+++|++.| +|+++.+...++-.-++. ....+++..+... .+.-. .++..-...
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~L~~~g-~V~VVAP~~~~Sg~g~aiTl~~Pl~~~~~~~~----~~~v~~GTPaDCV~l 75 (254)
T 2v4n_A 2 MRILLSNDDGV-HAPGIQTLAKALREFA-DVQVVAPDRNRSGASNSLTLESSLRTFTFDNG----DIAVQMGTPTDCVYL 75 (254)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTCTTCCCCSSCCEEEECTTS----CEEEETCCHHHHHHH
T ss_pred CeEEEEcCCCC-CCHHHHHHHHHHHhCC-cEEEEeeCCCCcCccCCcCCCCCeEEEEeCCC----CeEECCCCHHHHHHH
Confidence 68888777765 5567889999998776 999999988776665431 2333555544211 12222 333322221
Q ss_pred HHHhCcHHHHHHHHHhcCCCCCccEEEeCC----------ch---hhHHHHHHHcCCccEEEec
Q 012412 92 FWQIGPQTLTELVEKMNGSDSPVDCIVYDS----------IL---LWALDVAKKFGLLGAPFLT 142 (464)
Q Consensus 92 ~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~----------~~---~~~~~~A~~~giP~v~~~~ 142 (464)
-+..+.. .++|+||+.. ++ ..++.-|..+|||.|.+|.
T Consensus 76 -----------al~~ll~--~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 126 (254)
T 2v4n_A 76 -----------GVNALMR--PRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSL 126 (254)
T ss_dssp -----------HHHTTSS--SCCSEEEEEEEESCCCGGGGGGCHHHHHHHTTTTSSSCEEEEEE
T ss_pred -----------HHhhccC--CCCCEeeeCCcCCCCCCCCeeccHHHHHHHHHHhcCCCeEEEec
Confidence 1222332 2359999743 22 2233335669999999865
|
| >3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A* | Back alignment and structure |
|---|
Probab=88.03 E-value=0.42 Score=49.82 Aligned_cols=148 Identities=11% Similarity=0.043 Sum_probs=90.8
Q ss_pred HHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEE-eccChHHhhccccccceeccCChhHHHHHHHhCCc
Q 012412 296 MEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVV-SWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVP 374 (464)
Q Consensus 296 ~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~-~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP 374 (464)
+..+.+.+.. ++.+++..+......... .+ ..+.+.-+ ++.+-.++|..+|+ +||= =++.+.|.+..++|
T Consensus 566 ~~~l~~~l~~-~~~li~r~Hp~~~~~~~~--~~---~~~~~~~~~~~~di~~ll~~aD~--lITD-ySSv~fD~~~l~kP 636 (729)
T 3l7i_A 566 LDNLYKELGD-DYVILLRMHYLISNALDL--SG---YENFAIDVSNYNDVSELFLISDC--LITD-YSSVMFDYGILKRP 636 (729)
T ss_dssp HHHHHHHHTT-TEEEEECCCHHHHTTCCC--TT---CTTTEEECTTCSCHHHHHHTCSE--EEES-SCTHHHHHGGGCCC
T ss_pred HHHHHHHcCC-CeEEEEecCcchhccccc--cc---cCCcEEeCCCCcCHHHHHHHhCE--EEee-chHHHHhHHhhCCC
Confidence 4555555543 556665554321111110 00 23334333 45667799999999 9987 56678999999999
Q ss_pred EeccCCccchhhHHHHHHhHhcceeec----c---CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHcCCCcH
Q 012412 375 MVAMPQWSDQSTNAKYILDVWKTGLKF----P---IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSD 447 (464)
Q Consensus 375 ~v~~P~~~DQ~~na~rl~~~~G~g~~l----~---~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~ 447 (464)
+|......|++.+- .. |.=..+ + --+.++|.++|.....+. ..++++.+++.+.+... .+|.+++
T Consensus 637 iif~~~D~~~Y~~~----~r-g~y~d~~~~~pg~~~~~~~eL~~~i~~~~~~~--~~~~~~~~~~~~~~~~~-~dg~as~ 708 (729)
T 3l7i_A 637 QFFFAYDIDKYDKG----LR-GFYMNYMEDLPGPIYTEPYGLAKELKNLDKVQ--QQYQEKIDAFYDRFCSV-DNGKASQ 708 (729)
T ss_dssp EEEECTTTTTTTSS----CC-SBSSCTTSSSSSCEESSHHHHHHHHTTHHHHH--HHTHHHHHHHHHHHSTT-CCSCHHH
T ss_pred EEEecCCHHHHhhc----cC-CcccChhHhCCCCeECCHHHHHHHHhhhhccc--hhHHHHHHHHHHHhCCc-cCChHHH
Confidence 99987666665431 12 322111 1 357889999998877532 26777777777777543 4566667
Q ss_pred HHHHHHHHHHHhh
Q 012412 448 SNIDEFVASLACS 460 (464)
Q Consensus 448 ~~~~~~~~~l~~~ 460 (464)
+.++.+++.....
T Consensus 709 ri~~~i~~~~~~~ 721 (729)
T 3l7i_A 709 YIGDLIHKDIKEQ 721 (729)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHhcCcCc
Confidence 7666666665543
|
| >1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A* | Back alignment and structure |
|---|
Probab=86.51 E-value=4.7 Score=33.99 Aligned_cols=98 Identities=15% Similarity=0.141 Sum_probs=62.6
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCccc------ccccccCCCCCCceEEEccCCCCCCCCCCccCHH
Q 012412 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFF------YKSLHRDSSSSSIPLEAISDGYDEGGYAQAESIE 86 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~------~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 86 (464)
+-.|++++..|.|-..-.+.+|-..+.+|++|.|+..-.. ...+. .-++.++....++.. .. ....
T Consensus 28 ~g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF~Kg~~~~gE~~~l~----~L~v~~~~~g~gf~~---~~-~~~~ 99 (196)
T 1g5t_A 28 RGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFIKGTWPNGERNLLE----PHGVEFQVMATGFTW---ET-QNRE 99 (196)
T ss_dssp CCCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEESSCCSSCCHHHHHHG----GGTCEEEECCTTCCC---CG-GGHH
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEeeCCCCCccHHHHHH----hCCcEEEEccccccc---CC-CCcH
Confidence 4478889999999999999999999999999999965442 12333 224788887765532 11 1111
Q ss_pred HHHHHHHHhCcHHHHHHHHHhcCCCCCccEEEeCCchh
Q 012412 87 AYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILL 124 (464)
Q Consensus 87 ~~~~~~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~~ 124 (464)
.- .......+....+.+.. ..+|+||.|....
T Consensus 100 ~~----~~~a~~~l~~a~~~l~~--~~yDlvILDEi~~ 131 (196)
T 1g5t_A 100 AD----TAACMAVWQHGKRMLAD--PLLDMVVLDELTY 131 (196)
T ss_dssp HH----HHHHHHHHHHHHHHTTC--TTCSEEEEETHHH
T ss_pred HH----HHHHHHHHHHHHHHHhc--CCCCEEEEeCCCc
Confidence 11 11113344455454443 3479999997653
|
| >2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ... | Back alignment and structure |
|---|
Probab=82.61 E-value=8.5 Score=33.85 Aligned_cols=114 Identities=15% Similarity=0.153 Sum_probs=58.4
Q ss_pred HHHHHHHHHHhCCCeEEEEeCcccccccc-cCCCCCCceEEEccCCCCCCCCCCccCHHHHHHHHH---HhC--------
Q 012412 29 PLLQFSRRLQHKGIKVTLVTTRFFYKSLH-RDSSSSSIPLEAISDGYDEGGYAQAESIEAYLERFW---QIG-------- 96 (464)
Q Consensus 29 p~l~la~~L~~rGh~V~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~---~~~-------- 96 (464)
-...+....+++|-+|.|+++......+. +.....|-.++ -..|....+++.......++.+. ...
T Consensus 53 ~A~~~i~~~a~~gg~iLfVgTk~~a~~~V~~~A~~~g~~yv--~~RWlgG~LTN~~ti~~~i~~l~~le~~~~~g~f~~l 130 (256)
T 2vqe_B 53 RTFRFIEDLAMRGGTILFVGTKKQAQDIVRMEAERAGMPYV--NQRWLGGMLTNFKTISQRVHRLEELEALFASPEIEER 130 (256)
T ss_dssp HHHHHHHHHHTTTCCEEEECCSSSSTTTTTTTTTSSSCCEE--CSCCCTTTTTTHHHHHHHHHHHHHHHHHTTSTTSSCS
T ss_pred HHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHHhCCeee--cCeeCCCcccCHHHHHHHHHHHHHHHHHhhcCccccc
Confidence 33444555667899999999976554433 11223333333 23354434455444433333222 110
Q ss_pred --------cHHHHHHHHH---hcCCCCCccEEEe-CCch-hhHHHHHHHcCCccEEEecch
Q 012412 97 --------PQTLTELVEK---MNGSDSPVDCIVY-DSIL-LWALDVAKKFGLLGAPFLTQS 144 (464)
Q Consensus 97 --------~~~l~~~~~~---l~~~~~p~DlVI~-D~~~-~~~~~~A~~~giP~v~~~~~~ 144 (464)
...+..+-+. +..-.+.||+||. |+.. ..+..=|..+|||+|.+.-+.
T Consensus 131 ~Kke~~~~~r~~~kL~k~lgGik~m~~~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivDTn 191 (256)
T 2vqe_B 131 PKKEQVRLKHELERLQKYLSGFRLLKRLPDAIFVVDPTKEAIAVREARKLFIPVIALADTD 191 (256)
T ss_dssp CHHHHTTHHHHHHHHHHHSTTGGGCSSCCSEEEESCTTTTHHHHHHHHHTTCCCEECCCTT
T ss_pred cHHHHHHHHHHHHHHHHhhcCccccccCCCEEEEeCCccchHHHHHHHHcCCCEEEEecCC
Confidence 0011111111 1111122488885 6655 556777999999999876654
|
| >3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP} | Back alignment and structure |
|---|
Probab=81.43 E-value=1.5 Score=41.45 Aligned_cols=37 Identities=19% Similarity=0.217 Sum_probs=30.8
Q ss_pred CcEEEEEcC-CCccChHHHHHHHHHHHhCCCeEEEEeC
Q 012412 13 LAHCLVLTY-PGQGHINPLLQFSRRLQHKGIKVTLVTT 49 (464)
Q Consensus 13 ~~~il~~~~-~~~GH~~p~l~la~~L~~rGh~V~~~~~ 49 (464)
|++|++++. +|-|-..-...+|..|+++|++|.++..
T Consensus 1 M~~i~~~~gkGG~GKTt~a~~la~~la~~g~~vllvd~ 38 (374)
T 3igf_A 1 MALILTFLGKSGVARTKIAIAAAKLLASQGKRVLLAGL 38 (374)
T ss_dssp -CEEEEEECSBHHHHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CcEEEEEeCCCCCcHHHHHHHHHHHHHHCCCCeEEEeC
Confidence 457876554 4559999999999999999999999988
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 464 | ||||
| d2pq6a1 | 473 | c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransfe | 1e-96 | |
| d2c1xa1 | 450 | c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-gluc | 9e-92 | |
| d2vcha1 | 471 | c.87.1.10 (A:6-476) Hydroquinone glucosyltransfera | 1e-90 | |
| d2acva1 | 461 | c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transf | 5e-86 | |
| d1rrva_ | 401 | c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Am | 2e-41 | |
| d1iira_ | 401 | c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycol | 8e-41 | |
| d1pn3a_ | 391 | c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA | 2e-33 | |
| d1rzua_ | 477 | c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacte | 2e-04 |
| >d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]} Length = 473 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: (Iso)flavonoid glycosyltransferase species: Medicago truncatula [TaxId: 3880]
Score = 297 bits (760), Expect = 1e-96
Identities = 127/469 (27%), Positives = 218/469 (46%), Gaps = 27/469 (5%)
Query: 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSL------HRDSSSSSIPLE 68
H +++ YP QGHINPL + ++ L +G +T V T + +K L + E
Sbjct: 3 HVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFE 62
Query: 69 AISDGYD--EGGYAQAESIEAYLERFWQIGPQTLTELVEKMN--GSDSPVDCIVYDSILL 124
+I DG EG ++ + + + + EL+ ++N + PV C+V D +
Sbjct: 63 SIPDGLTPMEGDGDVSQDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMS 122
Query: 125 WALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNEIL-------------LP 171
+ + A++F L + + S H + + + +P
Sbjct: 123 FTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVERGIIPFKDESYLTNGCLETKVDWIP 182
Query: 172 GMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKT 231
G+ +D+ FI + + ++K +L NTF ELE +V+ L T
Sbjct: 183 GLKNFRLKDIVDFIRTTNPNDIM-LEFFIEVADRVNKDTTILLNTFNELESDVINALSST 241
Query: 232 WSLRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVEL 291
+PS D S C+ WL + SVVYV++GS +
Sbjct: 242 IPSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVM 301
Query: 292 KAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKS--LVVSWCPQLEVLA 349
E++ E AWGL + + FLW++R FS E L+ SWCPQ +VL
Sbjct: 302 TPEQLLEFAWGLANCKKSFLWIIRPDLVIGGSVIFSSEFTNEIADRGLIASWCPQDKVLN 361
Query: 350 HEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPI-VKRDA 408
H + G F+THCGWNST E++ GVPM+ P ++DQ T+ ++I + W+ G++ VKR+
Sbjct: 362 HPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEIDTNVKREE 421
Query: 409 IADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASL 457
+A I+E++ G++GK++++ A + +K A+E GG S N+++ + +
Sbjct: 422 LAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKVIKDV 470
|
| >d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]} Length = 450 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: UDP glucose:flavonoid 3-o-glucosyltransferase species: Grape (Vitis vinifera) [TaxId: 29760]
Score = 283 bits (725), Expect = 9e-92
Identities = 125/463 (26%), Positives = 207/463 (44%), Gaps = 31/463 (6%)
Query: 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHR-----DSSSSSIPLEA 69
H VL +P H PLL RRL + + +I
Sbjct: 3 HVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMHTMQCNIKSYD 62
Query: 70 ISDGYDEGGYAQAESIEAYLERFWQIGPQTLTE-LVEKMNGSDSPVDCIVYDSILLWALD 128
ISDG EG Y A + +E F + P++ + +V + + PV C+V D+ + +A D
Sbjct: 63 ISDGVPEG-YVFAGRPQEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAAD 121
Query: 129 VAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGN-------EILLPGMPPLEPQDM 181
+A + G+ PF T + ++ + ++ ++G +PGM + +D+
Sbjct: 122 MAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIGVSGIQGREDELLNFIPGMSKVRFRDL 181
Query: 182 PSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTWSLRTIGPTI 241
I S M+ + + + KA V N+F EL++ + L+
Sbjct: 182 QEGIVFGNLNSLFSRMLHR-MGQVLPKATAVFINSFEELDDSLTNDLKSKLKTYLNIGPF 240
Query: 242 PSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAW 301
+ + C++WL +R SVVY+S+G+ E+ L+
Sbjct: 241 NLITPPPVVPNTTG------------CLQWLKERKPTSVVYISFGTVTTPPPAEVVALSE 288
Query: 302 GLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCG 361
L++S F+W +R+ + LP+ F ++T +VV W PQ EVLAHEA G FVTHCG
Sbjct: 289 ALEASRVPFIWSLRDKARVHLPEGFLEKT--RGYGMVVPWAPQAEVLAHEAVGAFVTHCG 346
Query: 362 WNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTG--LKFPIVKRDAIADCISEILEG 419
WNS E+++ GVP++ P + DQ N + + DV + G ++ + + + C +IL
Sbjct: 347 WNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGGVFTKSGLMSCFDQILSQ 406
Query: 420 ERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLACSKN 462
E+GK+LR N R+ A AV GSS N V ++ K+
Sbjct: 407 EKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVSKPKD 449
|
| >d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 471 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Hydroquinone glucosyltransferase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 281 bits (719), Expect = 1e-90
Identities = 121/476 (25%), Positives = 205/476 (43%), Gaps = 41/476 (8%)
Query: 15 HCLVLTYPGQGHINPLLQFSRRL-QHKGIKVTLVTTRFFYKSLHRDSSSSSIPL---EAI 70
H ++ PG GH+ PL++F++RL G+ VT V S + + S+P
Sbjct: 3 HVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLDSLPSSISSVF 62
Query: 71 SDGYDEGGYAQAESIEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVA 130
D + + IE+ + L ++ + +V D A DVA
Sbjct: 63 LPPVDLTDLSSSTRIESRISLTVTRSNPELRKVFDSFVEGGRLPTALVVDLFGTDAFDVA 122
Query: 131 KKFGLLGAPFLTQSCAVDYIYYHV----KKGSLELPLTGNEILLPGMPPLEPQDMPSFIH 186
+F + F + V + H+ + S E ++LPG P+ +D
Sbjct: 123 VEFHVPPYIFYPTTANVLSFFLHLPKLDETVSCEFRELTEPLMLPGCVPVAGKDFLDPAQ 182
Query: 187 DLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTWSLRTIGPTIPSFYL 246
D +Y + + +A+ +L NTF+ELE ++ L++ P P L
Sbjct: 183 DRKDD---AYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPGL--DKPPVYPVGPL 237
Query: 247 DKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSS 306
++ C+KWL+++ SV+YVS+GS L E++ ELA GL S
Sbjct: 238 VN------IGKQEAKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADS 291
Query: 307 DQHFLWVVR----------------ESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAH 350
+Q FLWV+R LP F + T ++ W PQ +VLAH
Sbjct: 292 EQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGF-VIPFWAPQAQVLAH 350
Query: 351 EATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGL-----KFPIVK 405
+TG F+THCGWNST+E++ G+P++A P +++Q NA + + + L +V+
Sbjct: 351 PSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDGLVR 410
Query: 406 RDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLACSK 461
R+ +A + ++EGE GK +R + ++ A + G+S + K
Sbjct: 411 REEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVALKWKAHK 466
|
| >d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]} Length = 461 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Triterpene UDP-glucosyl transferase UGT71G1 species: Medicago truncatula [TaxId: 3880]
Score = 269 bits (687), Expect = 5e-86
Identities = 100/476 (21%), Positives = 201/476 (42%), Gaps = 36/476 (7%)
Query: 1 MENNGKKPTSCKLAHCLVLTYPGQGHINPLLQFSRRLQHKG--IKVTLVTTRFFYKSLHR 58
M + K + + PG GH+ L+F++ L + + +T+ +F
Sbjct: 1 MSDINKNS------ELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFAD 54
Query: 59 D------SSSSSIPLEAISDGYDEGGYAQAESIEAYLERFWQIGPQTLTELVEKMNGSDS 112
+S I L + + +S E Y+ F + + ++ + +
Sbjct: 55 SYIKSVLASQPQIQLIDLPEVEPPP-QELLKSPEFYILTFLESLIPHVKATIKTI--LSN 111
Query: 113 PVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPL--TGNEILL 170
V +V D + +DV +FG+ FLT + + +K +E + + L
Sbjct: 112 KVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIEEVFDDSDRDHQL 171
Query: 171 PGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRK 230
+P + Q + + D Y+ E ++ NTF +LE+ ++ L
Sbjct: 172 LNIPGISNQVPSNVLPDACFNKDGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYD 231
Query: 231 TWSLRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVS-YGSFV 289
P + + ++ + ++ + +KWL+++ +SVV++ V
Sbjct: 232 HDE-----KIPPIYAVGPLLDLKGQPNPKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGV 286
Query: 290 ELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLA 349
++ E+A GLK S FLW E+ P+ F + K ++ W PQ+EVLA
Sbjct: 287 SFGPSQIREIALGLKHSGVRFLWSNSA-EKKVFPEGFLEWMELEGKGMICGWAPQVEVLA 345
Query: 350 HEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP------- 402
H+A G FV+HCGWNS +E++ GVP++ P +++Q NA ++ W GL
Sbjct: 346 HKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRKGS 405
Query: 403 -IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASL 457
+V + I + ++++ + + + +++++ AV GGSS ++ + + +
Sbjct: 406 DVVAAEEIEKGLKDLMDK--DSIVHKKVQEMKEMSRNAVVDGGSSLISVGKLIDDI 459
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} Length = 401 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Score = 150 bits (378), Expect = 2e-41
Identities = 48/440 (10%), Positives = 114/440 (25%), Gaps = 63/440 (14%)
Query: 17 LVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDE 76
L+ +G + + + RL+ G++ + + L + + + G +
Sbjct: 4 LLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLA------EVGVPHVPVGLPQ 57
Query: 77 GGYAQAESIEAYLERFWQIGPQT---LTELVEKMNGSDSPVDCIVYDSILLWALDVAKKF 133
Q E ++ T + V + V + + VA+K
Sbjct: 58 HMMLQEGMPPPPPEEEQRLAAMTVEMQFDAVPGAAEGCAAVVAVGDLAAATGVRSVAEKL 117
Query: 134 GLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNEILLPGMPPLEPQDMPSFIHDLGSYPA 193
GL + + + P + P +
Sbjct: 118 GLPFFYSVPSPVYLASPHLP--------------------PAYDEPTTPGVTDIRVLWEE 157
Query: 194 VSYMMMKFQFENID----KADWVLCNTFYELEEEVVEWLRKTWSLRTIGPTIPSFYLDKQ 249
+ ++ + + L L + P + +
Sbjct: 158 RAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGERPLLAADPVLAPLQPDVDAVQ---- 213
Query: 250 IEDDKDYGFSMFKSSTEACMKWLND-RAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQ 308
G + + A V++ +GS + ++A +
Sbjct: 214 ------TGAWLLSDERPLPPELEAFLAAGSPPVHIGFGSSSGRGIADAAKVAVEAIRAQG 267
Query: 309 HFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEA 368
+ + R + LP + + + H + A
Sbjct: 268 RRVILSRGWTELVLPD-------DRDDCFAIDEVNFQALFRR--VAAVIHHGSAGTEHVA 318
Query: 369 LSLGVPMVAMPQWSDQSTNAKYILDVWKTG--LKFPIVKRDAIADCISEILEGERGKELR 426
GVP + +P+ +DQ A + G P ++++ ++ +L E R
Sbjct: 319 TRAGVPQLVIPRNTDQPYFAGRVAA-LGIGVAHDGPTPTFESLSAALTTVLAP----ETR 373
Query: 427 RNAGKWRKLAKEAVAKGGSS 446
A +A + G ++
Sbjct: 374 ARA---EAVAGMVLTDGAAA 390
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} Length = 401 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Score = 148 bits (374), Expect = 8e-41
Identities = 51/436 (11%), Positives = 103/436 (23%), Gaps = 56/436 (12%)
Query: 17 LVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDE 76
L+ T +G PL+ + R++ G V + + +P +
Sbjct: 4 LLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDC----AERLAEVGVPHVPVGPSARA 59
Query: 77 GGYAQAESIEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLL 136
+ RF T + + + V + + VA+K G+
Sbjct: 60 PIQRAKPLTAEDVRRFTTEAIATQFDEIPAAAEGCAAVVTTGLLAAAIGVRSVAEKLGIP 119
Query: 137 GAPFLTQSCAVDYIYYHVKKGSLELPLTGNEILLPGMPPLEPQDMPSFIHDLGSYPAVS- 195
V YY PPL I + +
Sbjct: 120 YFYAFHCPSYVPSPYYP-------------------PPPLGEPSTQDTIDIPAQWERNNQ 160
Query: 196 ---YMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTWSLRTIGPTIPSFYLDKQIED 252
+ D + W+ L + PT
Sbjct: 161 SAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTDHPWVAADPVLAPLQPTDLDAV------- 213
Query: 253 DKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLW 312
G + + + A+ + +++ + +
Sbjct: 214 --QTGAWILPDERPLSPELAAFLDAGPPPVYLGFGSLGAPADAVRVAIDAIRAHGRRVIL 271
Query: 313 VVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLG 372
++ + + + H G +T A G
Sbjct: 272 SRGWADL--------VLPDDGADCFAIGEVNHQVLFGR--VAAVIHHGGAGTTHVAARAG 321
Query: 373 VPMVAMPQWSDQSTNAKYILDVWKTG--LKFPIVKRDAIADCISEILEGERGKELRRNAG 430
P + +PQ +DQ A + + G PI D+++ ++ L E A
Sbjct: 322 APQILLPQMADQPYYAGRVAE-LGVGVAHDGPIPTFDSLSAALATALTP----ETHARA- 375
Query: 431 KWRKLAKEAVAKGGSS 446
+A G +
Sbjct: 376 --TAVAGTIRTDGAAV 389
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} Length = 391 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Score = 127 bits (320), Expect = 2e-33
Identities = 48/434 (11%), Positives = 110/434 (25%), Gaps = 64/434 (14%)
Query: 17 LVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDE 76
L+ +G PL+ + RL+ G + + + +P+ +
Sbjct: 4 LITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCA----EVGVPMVPVGRAVRA 59
Query: 77 GGYAQAESIEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLL 136
G E E ++ + ++ + G D V + +A+K G+
Sbjct: 60 GAREPGELPPGAAEVVTEVVAEWFDKVPAAIEGCD-AVVTTGLLPAAVAVRSMAEKLGIP 118
Query: 137 GAPFLTQSCAVDYIYYHVKKGSLELPLTGNEILLPGMPPLEPQDMPSFIHDLGSYPAVSY 196
+ + ++ F + S+ A
Sbjct: 119 YRYTVLSPDHLPSEQSQAERDMYNQGAD-----------------RLFGDAVNSHRASIG 161
Query: 197 MMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTWSLRTIGPTIPSFYLDKQIEDDKDY 256
+ + D L G + L + +
Sbjct: 162 LPPVEHLYDYGYTDQPWLAADPVLS----PLRPTDLGTVQTGA----WILPDERPLSAE- 212
Query: 257 GFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRE 316
++ V S A+ + +++S + +
Sbjct: 213 ------------LEAFLAAGSTPVYVGFGSSSRPATADAAKMAIKAVRASGRRIVLSRGW 260
Query: 317 SEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMV 376
++ VV E+ + H +T+ A+ G+P +
Sbjct: 261 ADLVLPD--------DGADCFVVGEVNLQELFGR--VAAAIHHDSAGTTLLAMRAGIPQI 310
Query: 377 AMPQWSD----QSTNAKYILDVWKTG----LKFPIVKRDAIADCISEILEGERGKELRRN 428
+ + D Q+ +A V + G + P+ D+++ + L E
Sbjct: 311 VVRRVVDNVVEQAYHADR---VAELGVGVAVDGPVPTIDSLSAALDTALAPEIRARATTV 367
Query: 429 AGKWRKLAKEAVAK 442
A R A+
Sbjct: 368 ADTIRADGTTVAAQ 381
|
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Length = 477 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Score = 41.6 bits (96), Expect = 2e-04
Identities = 21/196 (10%), Positives = 51/196 (26%), Gaps = 13/196 (6%)
Query: 267 ACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKF 326
A ++D +S ++ + E + + + + +
Sbjct: 281 AEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGDVALEGALLAA 340
Query: 327 SDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGW---NSTMEALSLGVPMVAMPQWSD 383
+ + P ++ + + + AL G V
Sbjct: 341 ASRHHGRVGVAIGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCIPVVARTGGL 400
Query: 384 QST----NAKYILDVWKTGLKFPIVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEA 439
T N + TG++F V D + I + + W ++ K
Sbjct: 401 ADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTV------RYYHDPKLWTQMQKLG 454
Query: 440 VAKGGSSDSNIDEFVA 455
+ S + + + A
Sbjct: 455 MKSDVSWEKSAGLYAA 470
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 464 | |||
| d2c1xa1 | 450 | UDP glucose:flavonoid 3-o-glucosyltransferase {Gra | 100.0 | |
| d2pq6a1 | 473 | (Iso)flavonoid glycosyltransferase {Medicago trunc | 100.0 | |
| d2acva1 | 461 | Triterpene UDP-glucosyl transferase UGT71G1 {Medic | 100.0 | |
| d2vcha1 | 471 | Hydroquinone glucosyltransferase {Thale cress (Ara | 100.0 | |
| d1rrva_ | 401 | TDP-vancosaminyltransferase GftD {Amycolatopsis or | 100.0 | |
| d1iira_ | 401 | UDP-glucosyltransferase GtfB {Amycolatopsis orient | 100.0 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 100.0 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 99.94 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.39 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 99.28 | |
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 99.01 | |
| d1o6ca_ | 377 | UDP-N-acetylglucosamine 2-epimerase {Bacillus subt | 98.82 | |
| d1v4va_ | 373 | UDP-N-acetylglucosamine 2-epimerase {Thermus therm | 98.66 | |
| d2f9fa1 | 166 | First mannosyl transferase WbaZ {Archaeoglobus ful | 98.48 | |
| d1f6da_ | 376 | UDP-N-acetylglucosamine 2-epimerase {Escherichia c | 98.46 | |
| d1pswa_ | 348 | ADP-heptose LPS heptosyltransferase II {Escherichi | 97.79 | |
| d2bfwa1 | 196 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 97.7 | |
| d1uqta_ | 456 | Trehalose-6-phosphate synthase, OtsA {Escherichia | 95.57 | |
| d1j9ja_ | 247 | SurE homolog TM1662 {Thermotoga maritima [TaxId: 2 | 94.83 | |
| d1l5xa_ | 276 | SurE homolog PAE2908 (SurE-alpha) {Archaeon Pyroba | 93.08 | |
| d1qkka_ | 140 | Transcriptional regulatory protein DctD, receiver | 88.96 | |
| d1gsoa2 | 105 | Glycinamide ribonucleotide synthetase (GAR-syn), N | 86.12 | |
| d7reqa2 | 168 | Methylmalonyl-CoA mutase alpha subunit, C-terminal | 85.45 | |
| d1ccwa_ | 137 | Glutamate mutase, small subunit {Clostridium cochl | 84.72 | |
| d1yioa2 | 128 | Response regulatory protein StyR, N-terminal domai | 84.58 | |
| d1u7za_ | 223 | Coenzyme A biosynthesis bifunctional protein CoaBC | 83.69 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 82.04 | |
| d1mb3a_ | 123 | Cell division response regulator DivK {Caulobacter | 81.93 | |
| d1gsaa1 | 122 | Prokaryotic glutathione synthetase, N-terminal dom | 81.15 |
| >d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: UDP glucose:flavonoid 3-o-glucosyltransferase species: Grape (Vitis vinifera) [TaxId: 29760]
Probab=100.00 E-value=1.2e-52 Score=417.64 Aligned_cols=430 Identities=30% Similarity=0.469 Sum_probs=308.2
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCccccc---ccccC--CCCCCceEEEccCCCCCCCCCCccCHHHH
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYK---SLHRD--SSSSSIPLEAISDGYDEGGYAQAESIEAY 88 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~---~~~~~--~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 88 (464)
.||+|+|++++||++|+++||++|++|||+|+|++...... ..... .....+.+..++++++. +..........
T Consensus 2 ~hvl~~p~P~~gH~~p~l~la~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 80 (450)
T d2c1xa1 2 PHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMHTMQCNIKSYDISDGVPE-GYVFAGRPQED 80 (450)
T ss_dssp CEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC-------CTTEEEEECCCCCCT-TCCCCCCTTHH
T ss_pred CEEEEECchhHhHHHHHHHHHHHHHHCCCcEEEEEccCccchhhhhcccccccCCCceeeecCCCCCc-chhhccchHHH
Confidence 59999999999999999999999999999999997532211 11110 22446788888877766 33333333333
Q ss_pred HHHHHHhCcHHH-HHHHHHhcCCCCCccEEEeCCchhhHHHHHHHcCCccEEEecchHHHHHHHhhhhcCccc--CCCC-
Q 012412 89 LERFWQIGPQTL-TELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLE--LPLT- 164 (464)
Q Consensus 89 ~~~~~~~~~~~l-~~~~~~l~~~~~p~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~--~p~~- 164 (464)
+..+.......+ +.+.+.+.....++|+||+|.+..++..+|+.+|+|++.+.+.+.........+.....+ .+..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~~~~p~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (450)
T d2c1xa1 81 IELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIGVSGIQ 160 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHHHHHCSSCCT
T ss_pred HHHHHHHHHHHhHHHHHHHHHhCCCCCeEEEECCccHHHHHHHHHhCCCEEEEecCchhhhhhhhcccccccccCCCccc
Confidence 333333222222 222222222224569999999999999999999999999998887766544333111110 0000
Q ss_pred ----CCceeCCCCCCCCCCCCCCccccCCCCchHHHHHHHHHhhhccCCcEEEecchhhhhHHHHHHHHhcCC-eeeecc
Q 012412 165 ----GNEILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTWS-LRTIGP 239 (464)
Q Consensus 165 ----~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~-~~~vgp 239 (464)
......+......................+..... ..............+++.++.....+......+ ..++|+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~g~ 239 (450)
T d2c1xa1 161 GREDELLNFIPGMSKVRFRDLQEGIVFGNLNSLFSRMLH-RMGQVLPKATAVFINSFEELDDSLTNDLKSKLKTYLNIGP 239 (450)
T ss_dssp TCTTCBCTTSTTCTTCBGGGSCTTTSSSCTTSHHHHHHH-HHHHHGGGSSCEEESSCGGGCHHHHHHHHHHSSCEEECCC
T ss_pred cccccccccCCcccchhHhhhhhhhhcccchHHHHHHHH-HHHhhhhcccccccccHHhhhhhhhhhccccCCceeecCC
Confidence 00011112211111111111111222333444444 555666777888899998888777776665444 777776
Q ss_pred cCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEEcCccc
Q 012412 240 TIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQ 319 (464)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~ 319 (464)
....... . ..+..+++..|+...+.+++||+++||......+.+..++.++++.+.+|+|++.....
T Consensus 240 ~~~~~~~-----~--------~~~~~~~~~~~~~~~~~~~~v~~s~gs~~~~~~~~~~~~~~~~~~~~~~vl~~~~~~~~ 306 (450)
T d2c1xa1 240 FNLITPP-----P--------VVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSLRDKAR 306 (450)
T ss_dssp HHHHC----------------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEEECCGGGG
T ss_pred ccccCCC-----C--------CCcchhhhccccccCCccceeeecccccccCCHHHHHHHHHHHHhcCCeEEEEECCCcc
Confidence 5333110 0 11234667789988888899999999999889999999999999999999999988777
Q ss_pred CcCChhhhhhccCCCcEEEEeccChHHhhccccccceeccCChhHHHHHHHhCCcEeccCCccchhhHHHHHHh-Hhcce
Q 012412 320 AKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILD-VWKTG 398 (464)
Q Consensus 320 ~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~-~~G~g 398 (464)
..+++++... .+.|+.+.+|+||.++|.++++++||||||.||++||+++|||||++|++.||+.||+|+++ + |+|
T Consensus 307 ~~l~~~~~~~--~~~nv~~~~~~pq~~lL~hp~~~~fItHGG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~-G~G 383 (450)
T d2c1xa1 307 VHLPEGFLEK--TRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVL-EIG 383 (450)
T ss_dssp GGSCTTHHHH--HTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTS-CCE
T ss_pred ccCChhhhhh--ccccccccccCChHhhhccCceeEEEccCCccHHHHHHHcCCCEEecccccchHHHHHHHHHHc-CcE
Confidence 7788877666 78999999999999999777777799999999999999999999999999999999999975 8 999
Q ss_pred eecc--CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHhhc
Q 012412 399 LKFP--IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLACSK 461 (464)
Q Consensus 399 ~~l~--~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l~~~~ 461 (464)
+.++ .+++++|.++|+++|+|+.++++++|+++|++..+.++.+|||+.+.+..+++++..-|
T Consensus 384 ~~l~~~~~t~~~l~~ai~~vL~d~~y~~~~~r~~~l~~~~~~a~~~~gss~~~~~~~~e~v~r~~ 448 (450)
T d2c1xa1 384 VRIEGGVFTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVSKPK 448 (450)
T ss_dssp EECGGGSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHTSCC
T ss_pred EEecCCCcCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhhhc
Confidence 9998 89999999999999999855566789999998888888999999999999999987654
|
| >d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: (Iso)flavonoid glycosyltransferase species: Medicago truncatula [TaxId: 3880]
Probab=100.00 E-value=1.7e-52 Score=418.59 Aligned_cols=439 Identities=29% Similarity=0.563 Sum_probs=314.1
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccC------CCCCCceEEEccCCCCCC--CCCCccCH
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRD------SSSSSIPLEAISDGYDEG--GYAQAESI 85 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~------~~~~~~~~~~i~~~~~~~--~~~~~~~~ 85 (464)
.|||++|++++||++|+++||++|++|||+|||++++...+.+.+. .....+.+..++++.... ........
T Consensus 2 ~hvl~~p~p~~gH~~P~~~lA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (473)
T d2pq6a1 2 PHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIPDGLTPMEGDGDVSQDV 81 (473)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEECCCCC---------CCH
T ss_pred CEEEEECchhhhHHHHHHHHHHHHHHCCCeEEEEeCcchHhHHhhccCcccccCCCCcceeecCCCCcccccccchhhhH
Confidence 5899999999999999999999999999999999998776666531 123356677777655431 12234455
Q ss_pred HHHHHHHHHhCcHHHHHHHHHh---cCCCCCccEEEeCCchhhHHHHHHHcCCccEEEecchHHHHHHHhhhhc----Cc
Q 012412 86 EAYLERFWQIGPQTLTELVEKM---NGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKK----GS 158 (464)
Q Consensus 86 ~~~~~~~~~~~~~~l~~~~~~l---~~~~~p~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~----~~ 158 (464)
...+..+.......+.+....+ .+. .++|+||.|....++..+|+.+++|++.+.+..+........... ..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~vi~~~~~~~~~~~a~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (473)
T d2pq6a1 82 PTLCQSVRKNFLKPYCELLTRLNHSTNV-PPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVERGI 160 (473)
T ss_dssp HHHHHHHTTSSHHHHHHHHHHHHTCSSS-CCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccC-CCCeEEEecCcchhhHHHHHHhCCCceeeccccchhhhhhhcccccccccC
Confidence 5666666555555555444433 233 345999999999999999999999999998877665444333210 00
Q ss_pred cc------CCC---CCCceeCCCCCCCCCCCCCCccccCCCCchHHHHHHHHHhhhccCCcEEEecchhhhhHHHHHHHH
Q 012412 159 LE------LPL---TGNEILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLR 229 (464)
Q Consensus 159 ~~------~p~---~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~ 229 (464)
.+ ... ......+|+++.........+.............+. .....+.+....+.+++.+........+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (473)
T d2pq6a1 161 IPFKDESYLTNGCLETKVDWIPGLKNFRLKDIVDFIRTTNPNDIMLEFFI-EVADRVNKDTTILLNTFNELESDVINALS 239 (473)
T ss_dssp SSCSSGGGGTSSGGGCBCCSSTTCCSCBGGGSCGGGCCSCTTCHHHHHHH-HHHHTCCTTCCEEESSCGGGGHHHHHHHH
T ss_pred CCccccccccccccccccccCCCccccchhhhhhhhhhcchhHHHHHHHH-HHHHHHHhhhcccccchhhhhHhHHHHHH
Confidence 00 000 011223344444444444444443444455556666 67777788889999999988877777666
Q ss_pred hcCC-eeeecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhCCC
Q 012412 230 KTWS-LRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQ 308 (464)
Q Consensus 230 ~~~~-~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~ 308 (464)
...+ .++.++..+..............+....+ ...+...|+.......++|+++||......+...+++.++++++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~gs~~~~~~~~~~~~~~~~~~~~~ 318 (473)
T d2pq6a1 240 STIPSIYPIGPLPSLLKQTPQIHQLDSLDSNLWK-EDTECLDWLESKEPGSVVYVNFGSTTVMTPEQLLEFAWGLANCKK 318 (473)
T ss_dssp TTCTTEEECCCHHHHHHTSTTGGGGCC----------CHHHHHHTTSCTTCEEEEECCSSSCCCHHHHHHHHHHHHHTTC
T ss_pred hcCCcccccCCccccCCCCCCccccccCCccccc-ccHHHHHHhhhcCCCceeeeccCccccccHHHHHHHHHHHHhcCC
Confidence 5544 55555443332211011100011111112 235556677776778899999999998899999999999999999
Q ss_pred eEEEEEcCccc----CcCChhhhhhccCCCcEEEEeccChHHhhccccccceeccCChhHHHHHHHhCCcEeccCCccch
Q 012412 309 HFLWVVRESEQ----AKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQ 384 (464)
Q Consensus 309 ~~i~~~~~~~~----~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ 384 (464)
+++|+++.... ..+++++... .++|+++.+|+||.++|.|+++++||||||.||++||+++|||||++|++.||
T Consensus 319 ~~i~~~~~~~~~~~~~~~~~~~~~~--~~~Nv~~~~~~Pq~~lL~hp~~~~fItHGG~~s~~Eal~~GVP~lv~P~~~DQ 396 (473)
T d2pq6a1 319 SFLWIIRPDLVIGGSVIFSSEFTNE--IADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQ 396 (473)
T ss_dssp EEEEECCGGGSTTTGGGSCHHHHHH--HTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTH
T ss_pred eEEEEEccCCcccccccCcccchhh--ccCceEEeeeCCHHHHhcCCcCcEEEecCCccHHHHHHHcCCCEEeccchhhh
Confidence 99999965432 2455555444 67899999999999999888878899999999999999999999999999999
Q ss_pred hhHHHHH-HhHhcceeecc-CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 012412 385 STNAKYI-LDVWKTGLKFP-IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLA 458 (464)
Q Consensus 385 ~~na~rl-~~~~G~g~~l~-~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l~ 458 (464)
+.||+|+ +++ |+|+.++ ++++++|+++|+++|.|+.+++||+||++|++.+++++++||++++.++++|++|.
T Consensus 397 ~~na~rv~~~~-G~G~~l~~~~t~~~l~~ai~~vl~d~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~~~~~i~~~~ 471 (473)
T d2pq6a1 397 PTDCRFICNEW-EIGMEIDTNVKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKVIKDVL 471 (473)
T ss_dssp HHHHHHHHHTS-CCEEECCSSCCHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHc-CeEEeeCCCcCHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Confidence 9999998 567 9999999 99999999999999999866679999999999999999999999999999999975
|
| >d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Triterpene UDP-glucosyl transferase UGT71G1 species: Medicago truncatula [TaxId: 3880]
Probab=100.00 E-value=1.4e-50 Score=403.35 Aligned_cols=430 Identities=22% Similarity=0.386 Sum_probs=313.1
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEE--EeCccccccccc------CCCCCCceEEEccCCCCCCCCCCc
Q 012412 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTL--VTTRFFYKSLHR------DSSSSSIPLEAISDGYDEGGYAQA 82 (464)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~--~~~~~~~~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~ 82 (464)
.+++||||+|++++||++|+++||++|++|||+|++ ++++........ .....++.+..++++... ..+..
T Consensus 5 ~~~~hil~~p~P~~GH~~P~l~lA~~L~~rGH~V~vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 83 (461)
T d2acva1 5 NKNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQPQIQLIDLPEVEPP-PQELL 83 (461)
T ss_dssp HHCEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHHCSCTTEEEEECCCCCCC-CGGGG
T ss_pred CCCCeEEEecChhhhHHHHHHHHHHHHHHCCCCeEEEEEeCCccchhhhhhcccccccCCCCeeEEECCCCCCc-hhhhh
Confidence 446799999999999999999999999999998764 555443332221 123457888999877666 55666
Q ss_pred cCHHHHHHHHHHhCcHHHHHHHHHhcCCCCCccEEEeCCchhhHHHHHHHcCCccEEEecchHHHHHHHhhhhcCcccCC
Q 012412 83 ESIEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELP 162 (464)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p 162 (464)
.....++..+...+...++++++.+... ++|+||.|.+..++..+|+.+++|++.+++..+........+.......+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~d~vi~d~~~~~~~~~a~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (461)
T d2acva1 84 KSPEFYILTFLESLIPHVKATIKTILSN--KVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIEEV 161 (461)
T ss_dssp GSHHHHHHHHHHHTHHHHHHHHHHHCCT--TEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSCTTCC
T ss_pred hcHHHHHHHHHHHHHHHHHHHHHHhccC--CCeEEEEeccchHHHHHHHHhCCCeEEEecccchhhHHhhcccccccccc
Confidence 7778888888888888888999888763 46999999999999999999999999999988776665555433222111
Q ss_pred CC--CCceeCCCCCCCCC---CCCCCccccCCCCchHHHHHHHHHhhhccCCcEEEecchhhhhHHHHHHHHh----cCC
Q 012412 163 LT--GNEILLPGMPPLEP---QDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRK----TWS 233 (464)
Q Consensus 163 ~~--~~~~~~p~~p~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~----~~~ 233 (464)
.. ........++.... ........ .........+. +........+....+++..++......+.. ..+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (461)
T d2acva1 162 FDDSDRDHQLLNIPGISNQVPSNVLPDAC--FNKDGGYIAYY-KLAERFRDTKGIIVNTFSDLEQSSIDALYDHDEKIPP 238 (461)
T ss_dssp CCCSSGGGCEECCTTCSSCEEGGGSCHHH--HCTTTHHHHHH-HHHHHHTTSSEEEESCCHHHHHHHHHHHHHHCTTSCC
T ss_pred ccccccccccccccccccchhhhhhhhhh--hccchhHHHHH-HHHHhhhccccccccccccccchhhhhhhhcccCCCC
Confidence 11 01111111111100 00000000 00111223333 444555667788888888777655554433 235
Q ss_pred eeeecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccc-cCCHHHHHHHHHHHhhCCCeEEE
Q 012412 234 LRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFV-ELKAEEMEELAWGLKSSDQHFLW 312 (464)
Q Consensus 234 ~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~-~~~~~~~~~~~~al~~~~~~~i~ 312 (464)
.+++||........ ......+..+++..|++..+...++++++|+.. ..+.+.+..++.+++..+++++|
T Consensus 239 ~~~~~p~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (461)
T d2acva1 239 IYAVGPLLDLKGQP---------NPKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLW 309 (461)
T ss_dssp EEECCCCCCSSCCC---------BTTBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred ceeeccccccCCcc---------CCCccccCcHHHHHHHhhCCccceeeeeccccccCCCHHHHHHHHHHHHhcCccEEE
Confidence 88888876652210 001122345677888988777888888888876 56889999999999999999999
Q ss_pred EEcCcccCcCChhhhhhccCCCcEEEEeccChHHhhccccccceeccCChhHHHHHHHhCCcEeccCCccchhhHHHHH-
Q 012412 313 VVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYI- 391 (464)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl- 391 (464)
+...... ..++++.+....++|+.+..|.||.+++.++.+++||||||+||++||+++|||||++|++.||++||+|+
T Consensus 310 ~~~~~~~-~~~~~~~~~~~~~~n~~v~~~~pq~~~l~~p~~~~fItHGG~gs~~eAl~~GVP~l~~P~~~DQ~~nA~rlv 388 (461)
T d2acva1 310 SNSAEKK-VFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLV 388 (461)
T ss_dssp ECCCCGG-GSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHH
T ss_pred Eeecccc-cCCccchhhhccCCCeEEEecCCHHHHHhcccCCEEEecCCccHHHHHHHcCCCEEeCCcccchHHHHHHHH
Confidence 9876432 23444433322679999999999998886666666999999999999999999999999999999999997
Q ss_pred HhHhcceeecc--C------cCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHh
Q 012412 392 LDVWKTGLKFP--I------VKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLAC 459 (464)
Q Consensus 392 ~~~~G~g~~l~--~------~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l~~ 459 (464)
+++ |+|+.++ . +++++|+++|+++|+++ +.||+||+++++++|+++++||++..+++++|++|..
T Consensus 389 e~~-G~G~~l~~~~~~~~~~~t~~~l~~a~~~vl~~d--~~~r~~a~~l~~~~r~a~~~gg~s~~~~~~~~~~~~~ 461 (461)
T d2acva1 389 KEW-GVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKD--SIVHKKVQEMKEMSRNAVVDGGSSLISVGKLIDDITG 461 (461)
T ss_dssp HTS-CCEEESCSSCCTTCCCCCHHHHHHHHHHHTCTT--CTHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHHC
T ss_pred HHh-CceEEeeccccccCCccCHHHHHHHHHHHhhCC--HHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHhcC
Confidence 677 9999886 1 79999999999999753 1699999999999999999999999999999999863
|
| >d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Hydroquinone glucosyltransferase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=2.4e-49 Score=395.47 Aligned_cols=429 Identities=28% Similarity=0.456 Sum_probs=307.3
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHh-CCCeEEEEeCcccccccccC----CCCCCceEEEccCCCCCCCCCCccCHHHH
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQH-KGIKVTLVTTRFFYKSLHRD----SSSSSIPLEAISDGYDEGGYAQAESIEAY 88 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~-rGh~V~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 88 (464)
.||+++|++++||++|+++||++|++ |||+|||++++.+....... ....++....++..... ...........
T Consensus 2 ~hil~~p~p~~GH~~P~l~La~~L~~~rGH~Vt~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 80 (471)
T d2vcha1 2 PHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLDSLPSSISSVFLPPVDLT-DLSSSTRIESR 80 (471)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC-CCTTEEEEECCCCCCT-TSCTTCCHHHH
T ss_pred CEEEEECchhHhHHHHHHHHHHHHHHccCCEEEEEeCCCcchhhhhhcccccCCCCcceeecCccccc-ccccccchHHH
Confidence 39999999999999999999999965 89999999987654433210 12334555555543333 44555677777
Q ss_pred HHHHHHhCcHHHHHHHHHhcCCCCCccEEEeCCchhhHHHHHHHcCCccEEEecchHHHHHHHhhhhcCccc----CCCC
Q 012412 89 LERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLE----LPLT 164 (464)
Q Consensus 89 ~~~~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~----~p~~ 164 (464)
+..+...+...+....+.+.++..++|+||.|.+..++..+++.+|+|++++.+.+......+......... ....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (471)
T d2vcha1 81 ISLTVTRSNPELRKVFDSFVEGGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSCEFREL 160 (471)
T ss_dssp HHHHHHTTHHHHHHHHHHHHHTTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHHHCCSCGGGC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeccchHHHHHHHHhCCCcccccccchhhHHHhhcCcccccccCcccccc
Confidence 787888888888888777766556679999999999999999999999999988776555444332111110 0011
Q ss_pred CCceeCCCCCCCCCCCCCCccccCCCCchHHHHHHHHHhhhccCCcEEEecchhhhhHHHHHHHHhcC----Ceeeeccc
Q 012412 165 GNEILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTW----SLRTIGPT 240 (464)
Q Consensus 165 ~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~----~~~~vgp~ 240 (464)
..+..+++............ ............. ............+...+...+........... +++++++.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (471)
T d2vcha1 161 TEPLMLPGCVPVAGKDFLDP--AQDRKDDAYKWLL-HNTKRYKEAEGILVNTFFELEPNAIKALQEPGLDKPPVYPVGPL 237 (471)
T ss_dssp SSCBCCTTCCCBCGGGSCGG--GSCTTSHHHHHHH-HHHHHGGGCSEEEESCCTTTSHHHHHHHHSCCTTCCCEEECCCC
T ss_pred cccccccccccccccccccc--ccccchHHHHHHH-HHHHhhcccccccchhHHHHHHHHHhhcccccCCCCCccCcccc
Confidence 11122233222111111111 1122233334444 44445566667777777777765555544322 23444433
Q ss_pred CCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEEcCcc--
Q 012412 241 IPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESE-- 318 (464)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~-- 318 (464)
..... .....+..+++..|++.....+.+|+++|+.....+..+..+..+++.++.+++|......
T Consensus 238 ~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (471)
T d2vcha1 238 VNIGK------------QEAKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRSPSGI 305 (471)
T ss_dssp CCCSC------------SCC-----CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEECCCCSS
T ss_pred cccCc------------cccccccchhHHHHHHhcCCccccccccccccCCCHHHHHHHHHHHHhhcCCeEEEecccccc
Confidence 22210 1112234577888999888889999999999988899999999999999999999986532
Q ss_pred --------------cCcCChhhhhhccCCCcEEEEeccChHHhhccccccceeccCChhHHHHHHHhCCcEeccCCccch
Q 012412 319 --------------QAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQ 384 (464)
Q Consensus 319 --------------~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ 384 (464)
...+|+++.... .++||++.+|+||.+||+|+++++||||||+||++||+++|||||++|+++||
T Consensus 306 ~~~~~~~~~~~~~~~~~lp~~~~~~~-~~~nv~~~~w~Pq~~lL~hp~~~~fVtHGG~gS~~EAl~~GvP~v~~P~~~DQ 384 (471)
T d2vcha1 306 ANSSYFDSHSQTDPLTFLPPGFLERT-KKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQ 384 (471)
T ss_dssp TTTTTTCC--CSCGGGGSCTTHHHHT-TTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTH
T ss_pred ccccccccccccchhhhCCchhhhhc-cCCCeeecccCCHHHHhcCccCCEEEecCCccHHHHHHHcCCCEEEccccccc
Confidence 123444443221 46899999999999999877777799999999999999999999999999999
Q ss_pred hhHHHHH-HhHhcceeecc-----CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 012412 385 STNAKYI-LDVWKTGLKFP-----IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLA 458 (464)
Q Consensus 385 ~~na~rl-~~~~G~g~~l~-----~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l~ 458 (464)
++||+|+ +++ |+|+.+. .+++++|.++|+++|+|++|+.||+||+++++++++++++||+|..+++.+|++.+
T Consensus 385 ~~nA~rv~e~l-G~Gv~l~~~~~~~~t~~~l~~ai~~vl~~~~~~~~r~ra~~l~e~~~~a~~~gG~s~~~~~~~~~~~~ 463 (471)
T d2vcha1 385 KMNAVLLSEDI-RAALRPRAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVALKWK 463 (471)
T ss_dssp HHHHHHHHHTT-CCEECCCCCTTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHh-eeEEEEecCCCCcCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 9999998 568 9999996 38999999999999999877789999999999999999999999999999999876
Q ss_pred hh
Q 012412 459 CS 460 (464)
Q Consensus 459 ~~ 460 (464)
.-
T Consensus 464 ~~ 465 (471)
T d2vcha1 464 AH 465 (471)
T ss_dssp HH
T ss_pred Hh
Confidence 53
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Probab=100.00 E-value=1e-43 Score=347.11 Aligned_cols=359 Identities=14% Similarity=0.108 Sum_probs=238.9
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEccCCCCCC-C-CCCccCHHHHHHH
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEG-G-YAQAESIEAYLER 91 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~-~~~~~~~~~~~~~ 91 (464)
|||||+++|+.||++|+++||++|++|||+|+|++++.+.+.++ ..|+.+++++...... . ......... ...
T Consensus 1 mrIl~~~~gt~Ghv~P~l~lA~~L~~rGh~V~~~t~~~~~~~v~----~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 75 (401)
T d1rrva_ 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLA----EVGVPHVPVGLPQHMMLQEGMPPPPPEE-EQR 75 (401)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHH----HHTCCEEECSCCGGGCCCTTSCCCCHHH-HHH
T ss_pred CeEEEECCCChhHHHHHHHHHHHHHHCCCEEEEEEChhhHHHHH----HCCCeEEEcCCcHHhhhccccccccHHH-HHH
Confidence 79999999999999999999999999999999999999888888 6789999886322110 0 111122222 222
Q ss_pred HHHhCcHHHHHHHHHhcCCCCCccEEEeCCch-hhHHHHHHHcCCccEEEecchHHHHHHHhhhhcCcccCCCCCCceeC
Q 012412 92 FWQIGPQTLTELVEKMNGSDSPVDCIVYDSIL-LWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNEILL 170 (464)
Q Consensus 92 ~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~-~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 170 (464)
+.......+.+.++......++ |+++.|... .++..+|+.+|+|++...+.+.+.. .
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~a~~~~~p~~~~~~~~~~~~---------------------~ 133 (401)
T d1rrva_ 76 LAAMTVEMQFDAVPGAAEGCAA-VVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLA---------------------S 133 (401)
T ss_dssp HHHHHHHHHHHHHHHHTTTCSE-EEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSC---------------------C
T ss_pred HHHHHHHHHHHHHHHHHhcCCC-eEEEEcCchhhHHHHHHHHhCCCcccccccchhhc---------------------c
Confidence 3333333444555555555455 899888655 6678899999999998766652211 0
Q ss_pred CCCCC-CCCCCCCCccccCCCCchH----HHHHH---HHHhhhcc-----------CCcEEEecchhhhhHHHHHHHHhc
Q 012412 171 PGMPP-LEPQDMPSFIHDLGSYPAV----SYMMM---KFQFENID-----------KADWVLCNTFYELEEEVVEWLRKT 231 (464)
Q Consensus 171 p~~p~-~~~~~~~~~~~~~~~~~~~----~~~~~---~~~~~~~~-----------~~~~~l~~s~~~l~~~~~~~~~~~ 231 (464)
+..+. ................... ..... ......+. ......+...+.+.. .+..
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 208 (401)
T d1rrva_ 134 PHLPPAYDEPTTPGVTDIRVLWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGERPLLAADPVLAP-----LQPD 208 (401)
T ss_dssp SSSCCCBCSCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCSSCEECSCTTTSC-----CCSS
T ss_pred cccccccccccccccchhhhhHHHHHHHHHhhhHHHHHHHHHHhCCcccchhhhhccccchhhcchhhhcc-----cCCC
Confidence 00000 0000000000000000000 00000 00000000 001111111111111 1111
Q ss_pred CCeeeecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccC-CHHHHHHHHHHHhhCCCeE
Q 012412 232 WSLRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVEL-KAEEMEELAWGLKSSDQHF 310 (464)
Q Consensus 232 ~~~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~-~~~~~~~~~~al~~~~~~~ 310 (464)
.+...+|++.... ..+.+.++.+|++. ++++||+++||.... ..+....++.+++..+..+
T Consensus 209 ~~~~~~g~~~~~~----------------~~~~~~~~~~~l~~--~~~~v~~~~gs~~~~~~~~~~~~~~~~~~~~~~~~ 270 (401)
T d1rrva_ 209 VDAVQTGAWLLSD----------------ERPLPPELEAFLAA--GSPPVHIGFGSSSGRGIADAAKVAVEAIRAQGRRV 270 (401)
T ss_dssp CCCEECCCCCCCC----------------CCCCCHHHHHHHHS--SSCCEEECCTTCCSHHHHHHHHHHHHHHHHTTCCE
T ss_pred CCeEEECCCcccc----------------cccCCHHHHHhhcc--CCCeEEEECCccccCCHHHHHHHHHHHHhhcCCeE
Confidence 1345555543331 12235778899986 456899999998754 4567777888999999998
Q ss_pred EEEEcCcccCcCChhhhhhccCCCcEEEEeccChHHhhccccccceeccCChhHHHHHHHhCCcEeccCCccchhhHHHH
Q 012412 311 LWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKY 390 (464)
Q Consensus 311 i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~r 390 (464)
+|+.+.... .... .++|+++.+|+||.++|+++++ ||||||.||++||+++|||+|++|+..||+.||++
T Consensus 271 ~~~~~~~~~-~~~~-------~~~~v~~~~~~p~~~ll~~~~~--~I~hgG~~t~~Eal~~GvP~l~~P~~~DQ~~na~~ 340 (401)
T d1rrva_ 271 ILSRGWTEL-VLPD-------DRDDCFAIDEVNFQALFRRVAA--VIHHGSAGTEHVATRAGVPQLVIPRNTDQPYFAGR 340 (401)
T ss_dssp EEECTTTTC-CCSC-------CCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSBTHHHHHHH
T ss_pred EEecccccc-cccc-------CCCCEEEEeccCcHHHhhhccE--EEecCCchHHHHHHHhCCCEEEecccccHHHHHHH
Confidence 888765422 2222 7899999999999999999999 99999999999999999999999999999999999
Q ss_pred HHhHhcceeecc--CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHH
Q 012412 391 ILDVWKTGLKFP--IVKRDAIADCISEILEGERGKELRRNAGKWRKLAK 437 (464)
Q Consensus 391 l~~~~G~g~~l~--~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~ 437 (464)
++++ |+|+.++ +++++.|+++|+++|++ +|+++|++++++++
T Consensus 341 v~~~-G~g~~l~~~~~~~~~L~~ai~~vl~~----~~r~~a~~~~~~~~ 384 (401)
T d1rrva_ 341 VAAL-GIGVAHDGPTPTFESLSAALTTVLAP----ETRARAEAVAGMVL 384 (401)
T ss_dssp HHHH-TSEEECSSSCCCHHHHHHHHHHHTSH----HHHHHHHHHTTTCC
T ss_pred HHHC-CCEEEcCcCCCCHHHHHHHHHHHhCH----HHHHHHHHHHHHHh
Confidence 9999 9999998 78999999999999954 89999999999886
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=100.00 E-value=3.6e-42 Score=335.66 Aligned_cols=359 Identities=15% Similarity=0.139 Sum_probs=229.6
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEccCCCCCCC-CCCccCHHHHHHHH
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGG-YAQAESIEAYLERF 92 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~ 92 (464)
||||++++|++||++|+++||++|+++||+|+|++++...+.+. ..|+.|++++....... ...........+.+
T Consensus 1 mkil~~~~gt~Gh~~P~lala~~L~~~Gh~V~~~~~~~~~~~v~----~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 76 (401)
T d1iira_ 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLA----EVGVPHVPVGPSARAPIQRAKPLTAEDVRRFT 76 (401)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHH----HTTCCEEECCC-------CCSCCCHHHHHHHH
T ss_pred CEEEEECCCChhHHHHHHHHHHHHHHCCCEEEEEeCcchHHHHH----HcCCeEEECCcchhhhhhccccchHHHHHHHH
Confidence 79999999999999999999999999999999999999998888 77899999985443311 11222233333333
Q ss_pred HHhCcHHHHHHHHHhcCCCCCccEEEeCCch---hhHHHHHHHcCCccEEEecchHHHHHHHhhhhcCcccCCCCCCcee
Q 012412 93 WQIGPQTLTELVEKMNGSDSPVDCIVYDSIL---LWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNEIL 169 (464)
Q Consensus 93 ~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~---~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 169 (464)
..... .+.+.+....+ ++|.++.+.+. .++..+|..+++|...+.+...... .. ..+
T Consensus 77 ~~~~~-~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~--------------~~--~~~ 136 (401)
T d1iira_ 77 TEAIA-TQFDEIPAAAE---GCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVP--------------SP--YYP 136 (401)
T ss_dssp HHHHH-HHHHHHHHHTT---TCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSC--------------CS--SSC
T ss_pred HHHHH-HHHHHHHHHhh---cCcceEEeecchhHHHHHHHHHHhccccccccccccccc--------------cc--ccc
Confidence 22222 23333333333 34666665544 4466789999999988776552211 00 000
Q ss_pred CCCCCCCCCCCCCCccccCCCCch----HHHHHH---HHHhhh-----------ccCCcEEEecchhhhhHHHHHHHHhc
Q 012412 170 LPGMPPLEPQDMPSFIHDLGSYPA----VSYMMM---KFQFEN-----------IDKADWVLCNTFYELEEEVVEWLRKT 231 (464)
Q Consensus 170 ~p~~p~~~~~~~~~~~~~~~~~~~----~~~~~~---~~~~~~-----------~~~~~~~l~~s~~~l~~~~~~~~~~~ 231 (464)
.+.. ..............+.. ....+. ...... ....+..++++.+.+++ ....
T Consensus 137 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 208 (401)
T d1iira_ 137 PPPL---GEPSTQDTIDIPAQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTDHPWVAADPVLAP-----LQPT 208 (401)
T ss_dssp CCC------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTTTSC-----CCCC
T ss_pred cccc---ccccccchhcchhhhhhhhhHHHHHHHHHHHHHHHHhcCccchhhhhhcccchhhhcccccccC-----CCCc
Confidence 0111 10011000000000000 000000 000000 01112233333333322 1000
Q ss_pred C-CeeeecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhCCCeE
Q 012412 232 W-SLRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHF 310 (464)
Q Consensus 232 ~-~~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~ 310 (464)
. ....+|+.... -..+.......|+.. .+++||+++|+.. .+.+.++.++.+++..+..+
T Consensus 209 ~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~--~~~~i~~~~~~~~-~~~~~~~~~~~al~~~~~~~ 269 (401)
T d1iira_ 209 DLDAVQTGAWILP----------------DERPLSPELAAFLDA--GPPPVYLGFGSLG-APADAVRVAIDAIRAHGRRV 269 (401)
T ss_dssp SSCCEECCCCCCC----------------CCCCCCHHHHHHHHT--SSCCEEEECC----CCHHHHHHHHHHHHHTTCCE
T ss_pred ccccccccCcccC----------------cccccCHHHHHhhcc--CCCeEEEccCccc-cchHHHHHHHHHHHHcCCeE
Confidence 0 12222222111 012234556667775 4568999999875 47789999999999999999
Q ss_pred EEEEcCcccCcCChhhhhhccCCCcEEEEeccChHHhhccccccceeccCChhHHHHHHHhCCcEeccCCccchhhHHHH
Q 012412 311 LWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKY 390 (464)
Q Consensus 311 i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~r 390 (464)
+|+.+..... ... .++|+++++|+||.++|+++++ ||||||+||++||+++|+|+|++|+..||+.||++
T Consensus 270 ~~~~~~~~~~-~~~-------~~~nv~~~~~~p~~~~l~~~~~--~V~hgG~~t~~Eal~~GvP~v~~P~~~DQ~~na~~ 339 (401)
T d1iira_ 270 ILSRGWADLV-LPD-------DGADCFAIGEVNHQVLFGRVAA--VIHHGGAGTTHVAARAGAPQILLPQMADQPYYAGR 339 (401)
T ss_dssp EECTTCTTCC-CSS-------CGGGEEECSSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHH
T ss_pred EEeccCCccc-ccc-------CCCCEEEEeccCHHHHHhhcCE--EEecCCchHHHHHHHhCCCEEEccccccHHHHHHH
Confidence 9987654221 111 6789999999999999999999 99999999999999999999999999999999999
Q ss_pred HHhHhcceeecc--CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHH
Q 012412 391 ILDVWKTGLKFP--IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKE 438 (464)
Q Consensus 391 l~~~~G~g~~l~--~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~ 438 (464)
+++. |+|+.++ ++++++|+++|+++|+| +|+++|+++++.+++
T Consensus 340 l~~~-G~g~~l~~~~~~~~~l~~ai~~~l~~----~~~~~a~~~~~~~~~ 384 (401)
T d1iira_ 340 VAEL-GVGVAHDGPIPTFDSLSAALATALTP----ETHARATAVAGTIRT 384 (401)
T ss_dssp HHHH-TSEEECSSSSCCHHHHHHHHHHHTSH----HHHHHHHHHHHHSCS
T ss_pred HHHC-CCEEEcCcCCCCHHHHHHHHHHHhCH----HHHHHHHHHHHHHHh
Confidence 9999 9999998 89999999999999954 899999999999984
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=100.00 E-value=1.1e-41 Score=331.39 Aligned_cols=364 Identities=13% Similarity=0.152 Sum_probs=237.8
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEccCCCCCCCCCC----ccCHHHHH
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGYAQ----AESIEAYL 89 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~----~~~~~~~~ 89 (464)
|||||.+.|+.||++|+++||++|++|||+|+|++++...+.+. ..|+.+++++..... .... .......+
T Consensus 1 mril~~~~gt~Ghi~P~laLA~~L~~rGh~V~~~~~~~~~~~v~----~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 75 (391)
T d1pn3a_ 1 MRVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCA----EVGVPMVPVGRAVRA-GAREPGELPPGAAEVV 75 (391)
T ss_dssp CEEEEEEESSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHH----HHTCCEEECSSCSSG-GGSCTTCCCTTCGGGH
T ss_pred CEEEEEcCCChhHHHHHHHHHHHHHHCCCEEEEEEChhhHhHHH----HCCCeEEECCccHHH-HhhChhhhhHHHHHHH
Confidence 79999999999999999999999999999999999999988888 678999999854432 1111 11111111
Q ss_pred HHHHHhCcHHHHHHHHHhcCCCCCccEEEeCCchh---hHHHHHHHcCCccEEEecchHHHHHHHhhhhcCcccCCCCCC
Q 012412 90 ERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILL---WALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGN 166 (464)
Q Consensus 90 ~~~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~~---~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 166 (464)
..+. ...++.+.+.+ +.+|+||.|.+.. ++..+|+.+++|++.+.+++..........
T Consensus 76 ~~~~---~~~~~~l~~~~----~~~D~vi~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~~~~~------------ 136 (391)
T d1pn3a_ 76 TEVV---AEWFDKVPAAI----EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSEQSQA------------ 136 (391)
T ss_dssp HHHH---HHHHHHHHHHH----TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGGSCHH------------
T ss_pred HHHH---HHHHHHHHHHh----cCCCeEEEcccCchHHHHHHHHHHcCCceEEeeccccccccccccc------------
Confidence 1111 11222222222 2259999997653 456689999999998876652211000000
Q ss_pred ceeCCCCCCCCCCCCCCccccCCCCchHHHHHHHHHhhhcc-----------CCcEEEecchhhhhHHHHHHHHhcCCee
Q 012412 167 EILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENID-----------KADWVLCNTFYELEEEVVEWLRKTWSLR 235 (464)
Q Consensus 167 ~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~l~~s~~~l~~~~~~~~~~~~~~~ 235 (464)
......+. ....+...+. ....... ..+..++.+.+.++.. .+...+.+
T Consensus 137 --------------~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~----~~~~~~~~ 196 (391)
T d1pn3a_ 137 --------------ERDMYNQG-ADRLFGDAVN-SHRASIGLPPVEHLYDYGYTDQPWLAADPVLSPL----RPTDLGTV 196 (391)
T ss_dssp --------------HHHHHHHH-HHHHTHHHHH-HHHHTTSCCCCCCHHHHHHCSSCEECSCTTTSCC----CTTCCSCC
T ss_pred --------------hhhHHHHH-HHHHHHHHHH-HHHHHhcCcccccccccccccceeeccchhhhcc----CCCCCCee
Confidence 00000000 0000000000 0000000 0011111221111110 00011234
Q ss_pred eecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccC-CHHHHHHHHHHHhhCCCeEEEEE
Q 012412 236 TIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVEL-KAEEMEELAWGLKSSDQHFLWVV 314 (464)
Q Consensus 236 ~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~-~~~~~~~~~~al~~~~~~~i~~~ 314 (464)
++|+..... ..+.+.++..|+.. .++.||+++|+.... ..+....++.++...+.+++|..
T Consensus 197 ~~g~~~~~~----------------~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 258 (391)
T d1pn3a_ 197 QTGAWILPD----------------ERPLSAELEAFLAA--GSTPVYVGFGSSSRPATADAAKMAIKAVRASGRRIVLSR 258 (391)
T ss_dssp BCCCCCCCC----------------CCCCCHHHHHHTTS--SSCCEEEECTTCCSTHHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred eecCcccCc----------------cccCCHHHhhhhcc--CCCeEEEeccccccccHHHHHHHHHHHHHhcCCEEEEec
Confidence 444433220 12235667777775 356899999998754 45667778889999999988877
Q ss_pred cCcccCcCChhhhhhccCCCcEEEEeccChHHhhccccccceeccCChhHHHHHHHhCCcEeccCCccc----hhhHHHH
Q 012412 315 RESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSD----QSTNAKY 390 (464)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~D----Q~~na~r 390 (464)
.+... .... .++|+.+.+|+||.++|+++++ ||||||+||++||+++|+|+|++|+.+| |+.||++
T Consensus 259 ~~~~~-~~~~-------~~~~v~i~~~~p~~~ll~~a~~--~v~hgG~~t~~Eal~~G~P~v~~P~~~d~~~eQ~~nA~~ 328 (391)
T d1pn3a_ 259 GWADL-VLPD-------DGADCFVVGEVNLQELFGRVAA--AIHHDSAGTTLLAMRAGIPQIVVRRVVDNVVEQAYHADR 328 (391)
T ss_dssp TTTTC-CCSS-------CCTTCCEESSCCHHHHHTTSSC--EEEESCHHHHHHHHHHTCCEEEECSSCCBTTBCCHHHHH
T ss_pred ccccc-cccc-------CCCCEEEecccCHHHHHhhccE--EEecCchHHHHHHHHhCCcEEEeccccCCcchHHHHHHH
Confidence 55322 1222 6799999999999999999999 9999999999999999999999999887 9999999
Q ss_pred HHhHhcceeecc--CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHh
Q 012412 391 ILDVWKTGLKFP--IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLAC 459 (464)
Q Consensus 391 l~~~~G~g~~l~--~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l~~ 459 (464)
+++. |+|+.++ ++++++|.++|+++|++ ++|+||+++++.+++ .+..+.++.+.+.|..
T Consensus 329 l~~~-G~g~~l~~~~~~~~~l~~~i~~~l~~----~~r~~a~~~a~~~~~-----~g~~~aa~~i~~~l~~ 389 (391)
T d1pn3a_ 329 VAEL-GVGVAVDGPVPTIDSLSAALDTALAP----EIRARATTVADTIRA-----DGTTVAAQLLFDAVSL 389 (391)
T ss_dssp HHHH-TSEEEECCSSCCHHHHHHHHHHHTST----THHHHHHHHGGGSCS-----CHHHHHHHHHHHHHHH
T ss_pred HHHC-CCEEEcCcCCCCHHHHHHHHHHHhCH----HHHHHHHHHHHHHHh-----cCHHHHHHHHHHHHHh
Confidence 9999 9999998 89999999999999965 799999999988862 3445566655555544
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=99.94 E-value=1.1e-25 Score=214.64 Aligned_cols=336 Identities=14% Similarity=0.067 Sum_probs=191.2
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccc--cccccCCCCCCceEEEccCCCCCCCCCCccCHHHHHHH
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFY--KSLHRDSSSSSIPLEAISDGYDEGGYAQAESIEAYLER 91 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 91 (464)
.|||+.+.|+.||++|+++|+++|.++||+|+|++..... +.+. ..++.+..++..-.. .......+..
T Consensus 1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~~~~~~~~~~----~~~~~~~~~~~~~~~-----~~~~~~~~~~ 71 (351)
T d1f0ka_ 1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVP----KHGIEIDFIRISGLR-----GKGIKALIAA 71 (351)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGG----GGTCEEEECCCCCCT-----TCCHHHHHTC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeCCcchhhccc----ccCCcEEEEECCCcC-----CCCHHHHHHH
Confidence 3899988764599999999999999999999999875432 3344 456666666532111 1112222111
Q ss_pred HHHh--CcHHHHHHHHHhcCCCCCccEEEeCC--chhhHHHHHHHcCCccEEEecchHHHHHHHhhhhcCcccCCCCCCc
Q 012412 92 FWQI--GPQTLTELVEKMNGSDSPVDCIVYDS--ILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNE 167 (464)
Q Consensus 92 ~~~~--~~~~l~~~~~~l~~~~~p~DlVI~D~--~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 167 (464)
.... .......++++. +| |.++... ....+...|..+++|++.+....
T Consensus 72 ~~~~~~~~~~~~~i~~~~----~~-~~~~~~~~~~~~~~~~~a~~~~ip~~~~~~~~----------------------- 123 (351)
T d1f0ka_ 72 PLRIFNAWRQARAIMKAY----KP-DVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNG----------------------- 123 (351)
T ss_dssp HHHHHHHHHHHHHHHHHH----CC-SEEEECSSTTHHHHHHHHHHTTCCEEEEECSS-----------------------
T ss_pred HHHHHHhHHHHHHHhhcc----cc-ceeeecccchhhhhhhhhhhcccceeeccccc-----------------------
Confidence 1110 111122333332 45 7887653 44667788999999988764432
Q ss_pred eeCCCCCCCCCCCCCCccccCCCCchHHHHHHHHHhhhccCCcEEEecchhhhhHHHHHHHHhcCCeeeecccCCCcccc
Q 012412 168 ILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTWSLRTIGPTIPSFYLD 247 (464)
Q Consensus 168 ~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~vgp~~~~~~~~ 247 (464)
.++ ....... ...+.+...... . ......+|+......
T Consensus 124 --~~~--------------------~~~~~~~-------~~~~~~~~~~~~-~----------~~~~~~~~~~~~~~~-- 161 (351)
T d1f0ka_ 124 --IAG--------------------LTNKWLA-------KIATKVMQAFPG-A----------FPNAEVVGNPVRTDV-- 161 (351)
T ss_dssp --SCC--------------------HHHHHHT-------TTCSEEEESSTT-S----------SSSCEECCCCCCHHH--
T ss_pred --ccc--------------------hhHHHhh-------hhcceeeccccc-c----------ccceeEEcCCccccc--
Confidence 000 0111111 111222211110 0 002333332211100
Q ss_pred ccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhCC-CeEEEEEcCcccCcCChhh
Q 012412 248 KQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSD-QHFLWVVRESEQAKLPKKF 326 (464)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~-~~~i~~~~~~~~~~~~~~~ 326 (464)
... .....+.. .......+++..||... ....+.+.+.+..+. ....+...+... ......
T Consensus 162 -------------~~~-~~~~~~~~-~~~~~~~i~~~~gs~g~--~~~~~~~~~~~~~l~~~~~~i~~~~~~~-~~~~~~ 223 (351)
T d1f0ka_ 162 -------------LAL-PLPQQRLA-GREGPVRVLVVGGSQGA--RILNQTMPQVAAKLGDSVTIWHQSGKGS-QQSVEQ 223 (351)
T ss_dssp -------------HTS-CCHHHHHT-TCCSSEEEEEECTTTCC--HHHHHHHHHHHHHHGGGEEEEEECCTTC-HHHHHH
T ss_pred -------------ccc-hhHHhhhh-cccCCcccccccccchh--hhhHHHHHHhhhhhcccceeeeeccccc-hhhhhh
Confidence 000 11111222 22345577788888753 233333444444332 233333333211 111111
Q ss_pred hhhccCCCcEEEEeccChH-HhhccccccceeccCChhHHHHHHHhCCcEeccCCc---cchhhHHHHHHhHhcceeecc
Q 012412 327 SDETLTSHKSLVVSWCPQL-EVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQW---SDQSTNAKYILDVWKTGLKFP 402 (464)
Q Consensus 327 ~~~~~~~~nv~~~~~~p~~-~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~---~DQ~~na~rl~~~~G~g~~l~ 402 (464)
........|+.+.+|.++. ++|+.||+ ||||||.+|++|++++|+|+|++|+. .||..||++++++ |+|+.++
T Consensus 224 ~~~~~~~~~~~v~~f~~~~~~lm~~adl--~It~~G~~T~~Eal~~g~P~I~iP~~~~~~~Q~~NA~~l~~~-G~~~~~~ 300 (351)
T d1f0ka_ 224 AYAEAGQPQHKVTEFIDDMAAAYAWADV--VVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKA-GAAKIIE 300 (351)
T ss_dssp HHHHTTCTTSEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHT-TSEEECC
T ss_pred hhcccccccceeeeehhhHHHHHHhCch--hhccccchHHHHHHHhCCceeeeecccCCchHHHHHHHHHHC-CCEEEec
Confidence 1111156788999998866 89999999 99999999999999999999999975 4899999999999 9999998
Q ss_pred --CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHh
Q 012412 403 --IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLAC 459 (464)
Q Consensus 403 --~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l~~ 459 (464)
+++.+.|.++|..+..+ +.+++++.+++. ....++..+.+.|++|..
T Consensus 301 ~~~~~~e~l~~~l~~l~~~--------~~~~~~~~~~~~--~~~~~a~~i~~~i~~l~~ 349 (351)
T d1f0ka_ 301 QPQLSVDAVANTLAGWSRE--------TLLTMAERARAA--SIPDATERVANEVSRVAR 349 (351)
T ss_dssp GGGCCHHHHHHHHHTCCHH--------HHHHHHHHHHHT--CCTTHHHHHHHHHHHHHT
T ss_pred hhhCCHHHHHHHHHhhCHH--------HHHHHHHHHHcc--CCccHHHHHHHHHHHHHh
Confidence 88999999999886322 333444444432 122345667777776654
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.39 E-value=6e-11 Score=114.69 Aligned_cols=147 Identities=15% Similarity=0.158 Sum_probs=88.8
Q ss_pred ceEEEEeccccc--CCHHHHHHHHHHHhh----CCCeEEEEEcCccc-CcCChhhhhhccCCCcEEEEeccChH---Hhh
Q 012412 279 SVVYVSYGSFVE--LKAEEMEELAWGLKS----SDQHFLWVVRESEQ-AKLPKKFSDETLTSHKSLVVSWCPQL---EVL 348 (464)
Q Consensus 279 ~~v~vs~Gs~~~--~~~~~~~~~~~al~~----~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~nv~~~~~~p~~---~ll 348 (464)
..+++..|+... ...+.+...+..+.. .+.+++++..+... ...-..+.+. .+.++.+.+++|.. .++
T Consensus 249 ~~~i~~~G~~~~~~Kg~~~ll~a~~~~~~~~~~~~~~lvi~G~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 326 (437)
T d2bisa1 249 GVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEK--HGNVKVITEMLSREFVRELY 326 (437)
T ss_dssp CEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEECCBCHHHHHHHHHHHHT--CTTEEEECSCCCHHHHHHHH
T ss_pred CceEEEeecccccchhHHHHHhhhcccccccccccceeeeecccccccccchhhhccc--cccceeccccCcHHHHHHHH
Confidence 366777888752 234444443333322 13455544322111 0011111122 44566677888865 778
Q ss_pred ccccccceecc----CChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhc-CCc-h
Q 012412 349 AHEATGCFVTH----CGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILE-GER-G 422 (464)
Q Consensus 349 ~~~~~~~vI~H----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~-~~~-~ 422 (464)
..+++ ++.- |...++.||+++|+|+|+... ......+ +. +.|..++..+.++|+++|.++|. |++ .
T Consensus 327 ~~adi--~v~~s~~e~~~~~~~Eama~G~Pvi~~~~----g~~~e~i-~~-~~G~~~~~~d~~~la~~i~~ll~~~~~~~ 398 (437)
T d2bisa1 327 GSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDII-TN-ETGILVKAGDPGELANAILKALELSRSDL 398 (437)
T ss_dssp TTCSE--EEECCSCCSSCHHHHHHHTTTCEEEEESC----TTHHHHC-CT-TTCEEECTTCHHHHHHHHHHHHTTTTSCT
T ss_pred hhhcc--ccccccccccchHHHHHHHCCCCEEEeCC----CCcHHhE-EC-CcEEEECCCCHHHHHHHHHHHHhCCHHHH
Confidence 88998 6533 334699999999999997653 3344433 45 67887776789999999999996 432 3
Q ss_pred HHHHHHHHHHHHH
Q 012412 423 KELRRNAGKWRKL 435 (464)
Q Consensus 423 ~~~~~~a~~l~~~ 435 (464)
+.+.+++++.++.
T Consensus 399 ~~~~~~~~~~~~~ 411 (437)
T d2bisa1 399 SKFRENCKKRAMS 411 (437)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 5677777776554
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Probab=99.28 E-value=9.1e-10 Score=103.22 Aligned_cols=155 Identities=15% Similarity=0.185 Sum_probs=100.4
Q ss_pred HHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhCC-----CeEEEEEcCcccCcCChhhhhhccCCCcEEEEecc
Q 012412 268 CMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSD-----QHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWC 342 (464)
Q Consensus 268 ~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~-----~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~ 342 (464)
....++. +.+..+++..|+.. +.+-...++++++.+. ..+++..+++....+ +++.++....+++.+.++.
T Consensus 185 ~r~~~~~-~~~~~~i~~~gr~~--~~Kg~~~li~a~~~l~~~~~~~~~~ii~g~~~~~~~-~~~~~~~~~~~~v~~~g~~ 260 (370)
T d2iw1a1 185 YRQKNGI-KEQQNLLLQVGSDF--GRKGVDRSIEALASLPESLRHNTLLFVVGQDKPRKF-EALAEKLGVRSNVHFFSGR 260 (370)
T ss_dssp HHHHTTC-CTTCEEEEEECSCT--TTTTHHHHHHHHHTSCHHHHHTEEEEEESSSCCHHH-HHHHHHHTCGGGEEEESCC
T ss_pred hhhccCC-CccceEEEEEeccc--cccchhhhcccccccccccccceeeecccccccccc-ccccccccccccccccccc
Confidence 3344443 34557888888876 3344566666665542 344444444322211 2233333356789988887
Q ss_pred ChH-Hhhccccccceec--c--CChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeecc-CcCHHHHHHHHHHH
Q 012412 343 PQL-EVLAHEATGCFVT--H--CGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP-IVKRDAIADCISEI 416 (464)
Q Consensus 343 p~~-~ll~~~~~~~vI~--H--gG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~-~~~~~~l~~~i~~l 416 (464)
.+. .++..+|+ +|. + |-..++.||+++|+|+|+.. .......+.+. +.|..+. ..+.++|.++|.++
T Consensus 261 ~~~~~~~~~adv--~v~ps~~E~~~~~~~EAma~G~PvI~s~----~~g~~e~i~~~-~~G~l~~~~~d~~~la~~i~~l 333 (370)
T d2iw1a1 261 NDVSELMAAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTA----VCGYAHYIADA-NCGTVIAEPFSQEQLNEVLRKA 333 (370)
T ss_dssp SCHHHHHHHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEET----TSTTTHHHHHH-TCEEEECSSCCHHHHHHHHHHH
T ss_pred cccccccccccc--cccccccccccceeeecccCCeeEEEeC----CCChHHHhcCC-CceEEEcCCCCHHHHHHHHHHH
Confidence 654 89999999 663 3 33478899999999999764 44556678888 8897775 67899999999999
Q ss_pred hcCCch-HHHHHHHHHHH
Q 012412 417 LEGERG-KELRRNAGKWR 433 (464)
Q Consensus 417 l~~~~~-~~~~~~a~~l~ 433 (464)
++|++. +++.++|++..
T Consensus 334 l~d~~~~~~~~~~ar~~~ 351 (370)
T d2iw1a1 334 LTQSPLRMAWAENARHYA 351 (370)
T ss_dssp HHCHHHHHHHHHHHHHHH
T ss_pred HcCHHHHHHHHHHHHHHH
Confidence 999631 33444444433
|
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.01 E-value=1.9e-08 Score=98.13 Aligned_cols=137 Identities=12% Similarity=0.047 Sum_probs=86.5
Q ss_pred CCceEEEEeccccc-CCHHHHHHHHHHHhhCCCeEEEEEcCcccCc-CChhhhhhccCCCcEEEEeccChH---Hhhccc
Q 012412 277 KESVVYVSYGSFVE-LKAEEMEELAWGLKSSDQHFLWVVRESEQAK-LPKKFSDETLTSHKSLVVSWCPQL---EVLAHE 351 (464)
Q Consensus 277 ~~~~v~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~nv~~~~~~p~~---~ll~~~ 351 (464)
++..+++..|.... -..+.+-..+..+.+.+.++++...+..... .-.....+ .++++.+..+.+.. .+++.+
T Consensus 289 ~~~~~i~~vgrl~~~KG~~~Ll~a~~~~~~~~~~l~~~G~G~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~a 366 (477)
T d1rzua_ 289 DGSPLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGDVALEGALLAAASR--HHGRVGVAIGYNEPLSHLMQAGC 366 (477)
T ss_dssp SSSCEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEEECBCHHHHHHHHHHHHH--TTTTEEEEESCCHHHHHHHHHHC
T ss_pred CCccEEEEEeeeeecCCcHHHHHHHHHHHhhCCeEEEEecCCchHHHHHHHHHhh--cCCeEEEEcccChhHHHHHHHhC
Confidence 44567788898873 2344444444444445778777665432110 00111222 67899988777654 567889
Q ss_pred cccceeccC---Chh-HHHHHHHhCCcEeccCCcc-----chhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhc
Q 012412 352 ATGCFVTHC---GWN-STMEALSLGVPMVAMPQWS-----DQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILE 418 (464)
Q Consensus 352 ~~~~vI~Hg---G~~-s~~eal~~GvP~v~~P~~~-----DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~ 418 (464)
|+ +|.-. |+| +++||+++|+|+|+.-..+ ....+....... +.|...+..+.++|+++|.++++
T Consensus 367 D~--~v~PS~~E~fglv~lEAma~G~PvVas~~GG~~E~v~d~~~~~~~~~~-~~G~l~~~~d~~~la~ai~~~l~ 439 (477)
T d1rzua_ 367 DA--IIIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKA-ATGVQFSPVTLDGLKQAIRRTVR 439 (477)
T ss_dssp SE--EEECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTC-CCBEEESSCSHHHHHHHHHHHHH
T ss_pred cc--ccCCccccCCCHHHHHHHHcCCCEEEcCCCCCcceeecCCccccccCC-CceEEeCCCCHHHHHHHHHHHHh
Confidence 99 87655 444 7789999999999744321 122233334444 57888777899999999998875
|
| >d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Bacillus subtilis [TaxId: 1423]
Probab=98.82 E-value=6.4e-08 Score=90.94 Aligned_cols=354 Identities=11% Similarity=0.062 Sum_probs=181.7
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhC-CCeEEEEeCcccccccccCCCCCCceEEE-ccCCCCCCCCCCccCHHHHH
Q 012412 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHK-GIKVTLVTTRFFYKSLHRDSSSSSIPLEA-ISDGYDEGGYAQAESIEAYL 89 (464)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~r-Gh~V~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~~ 89 (464)
++|||++++ |++..+.-+.+|.++|.++ +.++.++.++.+.+..... ..++.+.+ +.-... ....+....+
T Consensus 1 ~k~Ki~~v~-GtR~e~~kl~pli~~l~~~~~~~~~li~tG~H~~~~~~~--~~~~~i~~~~~~~~~----~~~~~~~~~~ 73 (377)
T d1o6ca_ 1 KKLKVMTVF-GTRPEAIKMAPLVLELKKYPEIDSYVTVTAQHRQMLDQV--LDAFHIKPDFDLNIM----KERQTLAEIT 73 (377)
T ss_dssp CCEEEEEEE-CSHHHHHHHHHHHHHGGGCTTEEEEEEECCSCGGGTHHH--HHHTTCCCSEECCCC----CTTCCHHHHH
T ss_pred CCceEEEEE-EchHhHHHHHHHHHHHHhCCCCCEEEEEeCCCHHHHHHH--HhhcCCCCceeeecC----CCCCCHHHHH
Confidence 467999887 8899999999999999887 5799999988764422200 11111110 000111 1112222222
Q ss_pred HHHHHhCcHHHHHHHHHhcCCCCCccEEEe--CCch-hhHHHHHHHcCCccEEEecchHHHHHHHhhhhcCcccCCCCCC
Q 012412 90 ERFWQIGPQTLTELVEKMNGSDSPVDCIVY--DSIL-LWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGN 166 (464)
Q Consensus 90 ~~~~~~~~~~l~~~~~~l~~~~~p~DlVI~--D~~~-~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 166 (464)
. ..-..+.+.+++. +| |+||+ |-++ .+++.+|..++||.+-+...-
T Consensus 74 ~----~~i~~~~~~~~~~----kp-D~v~v~GDr~e~la~a~aa~~~~Ipi~HiegG~---------------------- 122 (377)
T d1o6ca_ 74 S----NALVRLDELFKDI----KP-DIVLVHGDTTTTFAGSLAAFYHQIAVGHVEAGL---------------------- 122 (377)
T ss_dssp H----HHHHHHHHHHHHH----CC-SEEEEETTCHHHHHHHHHHHHTTCEEEEESCCC----------------------
T ss_pred H----HHHHhhhhhhhhc----cc-ceeEeeecccccchhhhhhhhccceEEEEeccc----------------------
Confidence 2 2222344555554 45 98876 6555 567899999999988763322
Q ss_pred ceeCCCCCCCCCCCCCCccccCCCCchHHHHHHHHHhhhccCCcEEEecchhhhhHHHHHHHHhcC-CeeeecccCCCcc
Q 012412 167 EILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTW-SLRTIGPTIPSFY 245 (464)
Q Consensus 167 ~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~-~~~~vgp~~~~~~ 245 (464)
...... .....+... .... .-++..++.+....+. +....... +++.||-...+..
T Consensus 123 -------~s~~~~-----------~~~~de~~R-~~is--kls~~hf~~t~~~~~~--L~~~G~~~~~I~~vG~~~~D~i 179 (377)
T d1o6ca_ 123 -------RTGNKY-----------SPFPEELNR-QMTG--AIADLHFAPTGQAKDN--LLKENKKADSIFVTGNTAIDAL 179 (377)
T ss_dssp -------CCSCTT-----------TTTTHHHHH-HHHH--HHCSEEEESSHHHHHH--HHHTTCCGGGEEECCCHHHHHH
T ss_pred -------cccccc-----------ccCchhhhc-cccc--cceeEEeecchhhhhh--hhhhccccceEeeccchhHHHH
Confidence 000000 000111111 1211 2234556666443322 11111111 4777773322211
Q ss_pred ccccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccC---CHHHHHHHHHHHhhCCC-eEEEEEcCcccCc
Q 012412 246 LDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVEL---KAEEMEELAWGLKSSDQ-HFLWVVRESEQAK 321 (464)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~---~~~~~~~~~~al~~~~~-~~i~~~~~~~~~~ 321 (464)
... ... ......+.....++.+++++-..... ....+..+...+..... .+++..+.. ..
T Consensus 180 ~~~-~~~-------------~~~~~~~~~~~~~~~ilvt~Hr~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~ 243 (377)
T d1o6ca_ 180 NTT-VRD-------------GYSHPVLDQVGEDKMILLTAHRRENLGEPMENMFKAIRRIVGEFEDVQVVYPVHLN--PV 243 (377)
T ss_dssp HHH-CCS-------------SCCCSTTTTTTTSEEEEECC----------HHHHHHHHHHHHHCTTEEEEEC------CH
T ss_pred HHH-HHH-------------HHhhhhhhhccCCceEEEEeccccccccchHHHHHHHHhhcccccccccccccccc--cc
Confidence 000 000 00000111112455777776544322 23444455566665443 444333221 11
Q ss_pred CChhhhhhccCCCcEEEEeccChH---HhhccccccceeccCChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcce
Q 012412 322 LPKKFSDETLTSHKSLVVSWCPQL---EVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTG 398 (464)
Q Consensus 322 ~~~~~~~~~~~~~nv~~~~~~p~~---~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g 398 (464)
......+.....+|+.+.+++++. .+|.+|++ +|+.+|.+ ..||-..|+|+|.+....|+..- .+. |.-
T Consensus 244 ~~~~~~~~~~~~~ni~~~~~l~~~~fl~llk~s~~--vIgnSss~-i~Ea~~lg~P~Inir~~tERqe~----~~~-g~n 315 (377)
T d1o6ca_ 244 VREAAHKHFGDSDRVHLIEPLEVIDFHNFAAKSHF--ILTDSGGV-QEEAPSLGKPVLVLRDTTERPEG----VEA-GTL 315 (377)
T ss_dssp HHHHHHHC--CCSSEEECCCCCHHHHHHHHHHCSE--EEEC--CH-HHHGGGGTCCEEEECSCCC---C----TTT-TSS
T ss_pred cchhhhhccccccceEeccccchHHHHHHHhhhhe--eecccchh-HHhhhhhhceEEEeCCCCcCcch----hhc-Cee
Confidence 111122222256899999988866 67899999 99999888 66999999999988764443321 134 433
Q ss_pred eeccCcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 012412 399 LKFPIVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLA 458 (464)
Q Consensus 399 ~~l~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l~ 458 (464)
+. -..+.+.+.+++++++.++ .+.++..+...-+- +|.++...++.|+.++-
T Consensus 316 il-v~~~~~~I~~~i~~~l~~~---~~~~~~~~~~npYG----dG~as~rI~~~L~~~~~ 367 (377)
T d1o6ca_ 316 KL-AGTDEENIYQLAKQLLTDP---DEYKKMSQASNPYG----DGEASRRIVEELLFHYG 367 (377)
T ss_dssp EE-ECSCHHHHHHHHHHHHHCH---HHHHHHHHCCCTTC----CSCHHHHHHHHHHHHTT
T ss_pred EE-CCCCHHHHHHHHHHHHhCh---HHHhhhccCCCCCC----CChHHHHHHHHHHHhhC
Confidence 32 2678999999999999986 66665554433332 35555666666666543
|
| >d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Thermus thermophilus [TaxId: 274]
Probab=98.66 E-value=2.4e-07 Score=86.70 Aligned_cols=329 Identities=12% Similarity=0.043 Sum_probs=173.5
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhC-CCeEEEEeCcccccccccCCCCCCceEEEccCCCCCCCCCCccCHHHHHHH
Q 012412 13 LAHCLVLTYPGQGHINPLLQFSRRLQHK-GIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGYAQAESIEAYLER 91 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~r-Gh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 91 (464)
|.||+++ .|++..+.-+.+|.++|.+. +.++.++.+..+.+...+.....++.- ...+.. .....+....+..
T Consensus 2 MkkI~~v-~GtR~e~~kl~pli~~l~~~~~~~~~li~tG~H~~~~~~~~~~~~i~~---d~~l~~--~~~~~s~~~~~~~ 75 (373)
T d1v4va_ 2 MKRVVLA-FGTRPEATKMAPVYLALRGIPGLKPLVLLTGQHREQLRQALSLFGIQE---DRNLDV--MQERQALPDLAAR 75 (373)
T ss_dssp CEEEEEE-ECSHHHHHHHHHHHHHHHTSTTEEEEEEECSSCHHHHHHHHHTTTCCC---SEECCC--CSSCCCHHHHHHH
T ss_pred CCeEEEE-EEhhHHHHHHHHHHHHHHhCCCCCEEEEEccCChhhhhCcchhcCCCc---cccCCC--CCCCCCHHHHHHH
Confidence 4477655 46778899999999999874 889999998877554321001222221 100111 1112233333222
Q ss_pred HHHhCcHHHHHHHHHhcCCCCCccEEEe--CCch-hhHHHHHHHcCCccEEEecchHHHHHHHhhhhcCcccCCCCCCce
Q 012412 92 FWQIGPQTLTELVEKMNGSDSPVDCIVY--DSIL-LWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNEI 168 (464)
Q Consensus 92 ~~~~~~~~l~~~~~~l~~~~~p~DlVI~--D~~~-~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 168 (464)
....+..++.+. +| |+|+. |-++ .+++.+|..++||.+-+...-
T Consensus 76 ----~~~~~~~~l~~~----kP-D~vlv~GDr~e~la~a~aa~~~~ipi~HiegG~------------------------ 122 (373)
T d1v4va_ 76 ----ILPQAARALKEM----GA-DYVLVHGDTLTTFAVAWAAFLEGIPVGHVEAGL------------------------ 122 (373)
T ss_dssp ----HHHHHHHHHHHT----TC-SEEEEESSCHHHHHHHHHHHHTTCCEEEETCCC------------------------
T ss_pred ----HHHHHhhhhhhc----Cc-ccccccccCccchhHHHHHHHhhhhheeecccc------------------------
Confidence 222344555543 45 98885 6555 567888999999988763321
Q ss_pred eCCCCCCCCCCCCCCccccCCCCchHHHHHHHHHhhhccCCcEEEecchhhhhHHHHHHHHhc-CCeeeecccCCCcccc
Q 012412 169 LLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKT-WSLRTIGPTIPSFYLD 247 (464)
Q Consensus 169 ~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~-~~~~~vgp~~~~~~~~ 247 (464)
.+. +.... ......+... . .-++..++.+....+. +...... .+++.+|-..-+...
T Consensus 123 -----rsg---~~~~~-----~~de~~R~~i----s--kls~~hf~~t~~~~~~--L~~~Ge~~~~I~~vG~p~~D~i~- 180 (373)
T d1v4va_ 123 -----RSG---NLKEP-----FPEEANRRLT----D--VLTDLDFAPTPLAKAN--LLKEGKREEGILVTGQTGVDAVL- 180 (373)
T ss_dssp -----CCS---CTTSS-----TTHHHHHHHH----H--HHCSEEEESSHHHHHH--HHTTTCCGGGEEECCCHHHHHHH-
T ss_pred -----ccc---ccccC-----cchhhhhhhh----c--cccceeeecchhhhhh--hhhhcccccceeecccchhhHHH-
Confidence 000 00000 0011222222 1 2234556666442221 1111111 136666722111000
Q ss_pred ccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccC-CHHHHHHHHHHHhhCCC--eEEEEEcCcccCcCCh
Q 012412 248 KQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVEL-KAEEMEELAWGLKSSDQ--HFLWVVRESEQAKLPK 324 (464)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~-~~~~~~~~~~al~~~~~--~~i~~~~~~~~~~~~~ 324 (464)
....+.........++.+++++-..... ..+....++..+..... .+++-.+.. .....
T Consensus 181 ----------------~~~~~~~~~~~~~~~~~~lvt~hr~~n~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~--~~~~~ 242 (373)
T d1v4va_ 181 ----------------LAAKLGRLPEGLPEGPYVTVTMHRRENWPLLSDLAQALKRVAEAFPHLTFVYPVHLN--PVVRE 242 (373)
T ss_dssp ----------------HHHHHCCCCTTCCSSCEEEECCCCGGGGGGHHHHHHHHHHHHHHCTTSEEEEECCSC--HHHHH
T ss_pred ----------------hhhhhcccccccccccceeEEeccccccchHHHHHHHHHHHhhhcccceeeeeeccc--ccchh
Confidence 0011111111224566888887765432 33444455555544433 444443322 11111
Q ss_pred hhhhhccCCCcEEEEeccChH---HhhccccccceeccCChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeec
Q 012412 325 KFSDETLTSHKSLVVSWCPQL---EVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKF 401 (464)
Q Consensus 325 ~~~~~~~~~~nv~~~~~~p~~---~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l 401 (464)
...+......|+.+++.+++. .++.+|.+ +|+.+|.+ +.||.++|+|+|.+....|-... .+. |.-+.
T Consensus 243 ~~~~~~~~~~n~~~~~~l~~~~~l~ll~~s~~--vignSssg-i~Ea~~lg~P~Inir~~~eRqeg----~~~-g~nvl- 313 (373)
T d1v4va_ 243 AVFPVLKGVRNFVLLDPLEYGSMAALMRASLL--LVTDSGGL-QEEGAALGVPVVVLRNVTERPEG----LKA-GILKL- 313 (373)
T ss_dssp HHHHHHTTCTTEEEECCCCHHHHHHHHHTEEE--EEESCHHH-HHHHHHTTCCEEECSSSCSCHHH----HHH-TSEEE-
T ss_pred hhhhhhcccccceeeccchHHHHHHHhhhcee--Eecccchh-hhcchhhcCcEEEeCCCccCHHH----Hhc-CeeEE-
Confidence 111222245799999888876 56888988 99986654 56999999999999764433332 134 54443
Q ss_pred cCcCHHHHHHHHHHHhcCCchHHHHHHHHHH
Q 012412 402 PIVKRDAIADCISEILEGERGKELRRNAGKW 432 (464)
Q Consensus 402 ~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l 432 (464)
-..+.+++.++++.++.++ .++++....
T Consensus 314 v~~d~~~I~~~i~~~l~~~---~~~~~~~~~ 341 (373)
T d1v4va_ 314 AGTDPEGVYRVVKGLLENP---EELSRMRKA 341 (373)
T ss_dssp CCSCHHHHHHHHHHHHTCH---HHHHHHHHS
T ss_pred cCCCHHHHHHHHHHHHcCH---HHHhhcccC
Confidence 3568999999999999996 666655543
|
| >d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: First mannosyl transferase WbaZ species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=98.48 E-value=3.7e-07 Score=75.05 Aligned_cols=138 Identities=10% Similarity=0.200 Sum_probs=89.5
Q ss_pred EEEEecccccCCHHHHHHHHHHHhhCC-CeEEEEEcCcccCcCChhhhhhcc--CCCcEEEEeccChH---Hhhcccccc
Q 012412 281 VYVSYGSFVELKAEEMEELAWGLKSSD-QHFLWVVRESEQAKLPKKFSDETL--TSHKSLVVSWCPQL---EVLAHEATG 354 (464)
Q Consensus 281 v~vs~Gs~~~~~~~~~~~~~~al~~~~-~~~i~~~~~~~~~~~~~~~~~~~~--~~~nv~~~~~~p~~---~ll~~~~~~ 354 (464)
.++..|.+. +.+-...++++++++. ..+++ ++........+.+.+.+. ..+||++.+|+|.. .++..+++
T Consensus 14 ~~l~iGrl~--~~K~~~~~i~a~~~l~~~~l~i-vg~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~- 89 (166)
T d2f9fa1 14 FWLSVNRIY--PEKRIELQLEVFKKLQDEKLYI-VGWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSRCKG- 89 (166)
T ss_dssp CEEEECCSS--GGGTHHHHHHHHHHCTTSCEEE-EBCCCTTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHHCSE-
T ss_pred EEEEEecCc--cccCHHHHHHHHHHhcCCeEEE-EEecccccchhhhhhhhcccccCcEEEeecccccccccccccccc-
Confidence 466778875 3445556666776654 45544 443222222222221111 46899999999985 67888998
Q ss_pred ceeccC---C-hhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcCCchHHHHHHHH
Q 012412 355 CFVTHC---G-WNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGERGKELRRNAG 430 (464)
Q Consensus 355 ~vI~Hg---G-~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~~~~~~~~~~a~ 430 (464)
+|+-. | ..++.||+++|+|+|+.+. ..+...+.+. ..|...+ .+.+++.++|.++++|+ +.+++++.
T Consensus 90 -~i~ps~~e~~~~~~~Ea~~~g~pvi~s~~----~~~~e~i~~~-~~g~~~~-~d~~~~~~~i~~l~~~~--~~~~~~~~ 160 (166)
T d2f9fa1 90 -LLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETVINE-KTGYLVN-ADVNEIIDAMKKVSKNP--DKFKKDCF 160 (166)
T ss_dssp -EEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHCCBT-TTEEEEC-SCHHHHHHHHHHHHHCT--TTTHHHHH
T ss_pred -cccccccccccccccccccccccceeecC----CcceeeecCC-cccccCC-CCHHHHHHHHHHHHhCH--HHHHHHHH
Confidence 55322 2 4589999999999998763 3345556666 7777554 47899999999999986 25665554
Q ss_pred H
Q 012412 431 K 431 (464)
Q Consensus 431 ~ 431 (464)
+
T Consensus 161 ~ 161 (166)
T d2f9fa1 161 R 161 (166)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Escherichia coli [TaxId: 562]
Probab=98.46 E-value=6.1e-06 Score=76.91 Aligned_cols=337 Identities=13% Similarity=0.071 Sum_probs=172.4
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhC-CCeEEEEeCcccccccccCCCCCCceE-EEccCCCCCCCCCCccCHHHHHHH
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHK-GIKVTLVTTRFFYKSLHRDSSSSSIPL-EAISDGYDEGGYAQAESIEAYLER 91 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~r-Gh~V~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~ 91 (464)
|||++++ |++..+.-+.+|.++|.++ +.++.++.+..+.+.........++.. ..+. .. ....+....+..
T Consensus 1 MKi~~v~-GtR~e~~kl~pli~~l~~~~~~~~~li~tG~H~~~~~~~~~~~~~~~~~~~~--~~----~~~~~~~~~~~~ 73 (376)
T d1f6da_ 1 MKVLTVF-GTRPEAIKMAPLVHALAKDPFFEAKVCVTAQHREMLDQVLKLFSIVPDYDLN--IM----QPGQGLTEITCR 73 (376)
T ss_dssp CEEEEEE-CSHHHHHHHHHHHHHHHHCTTCEEEEEECCTTGGGGHHHHHHTTCCCSEECC--CC----SSSSCHHHHHHH
T ss_pred CeEEEEE-EhhHhHHHHHHHHHHHHhCCCCCEEEEEcCCCHHHHHHHHHhcCCCCCcccc--cC----CCCCCHHHHHHH
Confidence 6888888 8999999999999999886 689999999877543321000111100 0111 11 111222222222
Q ss_pred HHHhCcHHHHHHHHHhcCCCCCccEEEe--CCch-hhHHHHHHHcCCccEEEecchHHHHHHHhhhhcCcccCCCCCCce
Q 012412 92 FWQIGPQTLTELVEKMNGSDSPVDCIVY--DSIL-LWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNEI 168 (464)
Q Consensus 92 ~~~~~~~~l~~~~~~l~~~~~p~DlVI~--D~~~-~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 168 (464)
. -..+.+.+.+. +| |+|++ |-+. .+++.+|..++||.+-+...-
T Consensus 74 ~----i~~~~~~~~~~----kP-D~v~v~GDr~e~la~a~aa~~~~ipi~HiegG~------------------------ 120 (376)
T d1f6da_ 74 I----LEGLKPILAEF----KP-DVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGL------------------------ 120 (376)
T ss_dssp H----HHHHHHHHHHH----CC-SEEEEETTCHHHHHHHHHHHTTTCCEEEESCCC------------------------
T ss_pred H----HHhhHHHHHhc----cC-cceeeeccccchhhHHHHHHhhCceEEEEeccc------------------------
Confidence 2 22344455544 45 88776 6555 667888999999988763321
Q ss_pred eCCCCCCCCCCCCCCccccCCCCchHHHHHHHHHhhhccCCcEEEecchhhhhHHHHHHHHhc-CCeeeecccCCCcccc
Q 012412 169 LLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKT-WSLRTIGPTIPSFYLD 247 (464)
Q Consensus 169 ~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~-~~~~~vgp~~~~~~~~ 247 (464)
+..+... +...+... .... .-++..++.+....+. +-..... .+++.||-...+....
T Consensus 121 --------~s~~~~~--------~~pde~~R-~~is--kls~~hf~~~~~~~~~--L~~~G~~~~~I~~vG~~~~D~l~~ 179 (376)
T d1f6da_ 121 --------RTGDLYS--------PWPEEANR-TLTG--HLAMYHFSPTETSRQN--LLRENVADSRIFITGNTVIDALLW 179 (376)
T ss_dssp --------CCSCTTS--------STTHHHHH-HHHH--HTCSEEEESSHHHHHH--HHHTTCCGGGEEECCCHHHHHHHH
T ss_pred --------ccccccc--------cCchhhhh-hhhc--cceeEEEeccHHHHhH--HHhcCCCccccceecCchHHHHHH
Confidence 0000000 00111111 1111 2334556666442222 1111111 1477777432210000
Q ss_pred ccccCccccccccccc---chhHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHH---HhhCCCeEEEEEcCcccCc
Q 012412 248 KQIEDDKDYGFSMFKS---STEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWG---LKSSDQHFLWVVRESEQAK 321 (464)
Q Consensus 248 ~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a---l~~~~~~~i~~~~~~~~~~ 321 (464)
.+ . ..... ..............++.|++++=...... +.+..+..+ +......+.+.........
T Consensus 180 ~~-----~---~~~~~~~~~~~~~~~~~~~~~~~~~ilvt~H~~~~~~-~~~~~i~~~l~~~~~~~~~~~ii~p~~~~~~ 250 (376)
T d1f6da_ 180 VR-----D---QVMSSDKLRSELAANYPFIDPDKKMILVTGHRRESFG-RGFEEICHALADIATTHQDIQIVYPVHLNPN 250 (376)
T ss_dssp HH-----H---HTTTCHHHHHHHHTTCTTCCTTSEEEEECCCCBSSCC-HHHHHHHHHHHHHHHHCTTEEEEEECCBCHH
T ss_pred HH-----h---hhhccchhhhhhhccccccCCCCceEEEecccchhhh-hhHHHHHHHHhhhhhhcceeEEecccccchh
Confidence 00 0 00000 00011111111235678888875444333 233444443 3333333333333221111
Q ss_pred CChhhhhhccCCCcEEEEeccChH---HhhccccccceeccCChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcce
Q 012412 322 LPKKFSDETLTSHKSLVVSWCPQL---EVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTG 398 (464)
Q Consensus 322 ~~~~~~~~~~~~~nv~~~~~~p~~---~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g 398 (464)
......+.....+|+.+.+.+++. .++.+|++ +|+..|. -.-||-..|+|.|.+-...+|+. ++ +. |.-
T Consensus 251 ~~~~~~~~~~~~~ni~~~~~l~~~~fl~ll~~a~~--vignSss-gi~Ea~~lg~P~Inir~~ter~~---~~-~~-g~~ 322 (376)
T d1f6da_ 251 VREPVNRILGHVKNVILIDPQEYLPFVWLMNHAWL--ILTDSGG-IQEEAPSLGKPVLVMRDTTERPE---AV-TA-GTV 322 (376)
T ss_dssp HHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHCSE--EEESSSG-GGGTGGGGTCCEEECSSCCSCHH---HH-HH-TSE
T ss_pred hhhhHhhhhcccccceeeccccHHHHHHHHhhceE--EEecCcc-hHhhHHHhCCCEEEcCCCccCcc---ce-ec-Cee
Confidence 111111222246899998777766 67899999 9988665 35699999999998865555653 33 34 433
Q ss_pred eeccCcCHHHHHHHHHHHhcCCchHHHHHHHHHH
Q 012412 399 LKFPIVKRDAIADCISEILEGERGKELRRNAGKW 432 (464)
Q Consensus 399 ~~l~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l 432 (464)
+.. ..+.+.+.+++.+++.++ .+++...+.
T Consensus 323 i~v-~~~~~~I~~ai~~~l~~~---~~~~~~~~~ 352 (376)
T d1f6da_ 323 RLV-GTDKQRIVEEVTRLLKDE---NEYQAMSRA 352 (376)
T ss_dssp EEC-CSSHHHHHHHHHHHHHCH---HHHHHHHHS
T ss_pred EEC-CCCHHHHHHHHHHHHhCh---HhhhhhccC
Confidence 332 568999999999999885 555544443
|
| >d1pswa_ c.87.1.7 (A:) ADP-heptose LPS heptosyltransferase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: ADP-heptose LPS heptosyltransferase II domain: ADP-heptose LPS heptosyltransferase II species: Escherichia coli [TaxId: 562]
Probab=97.79 E-value=0.00014 Score=66.68 Aligned_cols=104 Identities=13% Similarity=0.031 Sum_probs=69.3
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhC--CCeEEEEeCcccccccccCCCCCCc-eEEEccCCCCCCCCCCccCHHHHHH
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHK--GIKVTLVTTRFFYKSLHRDSSSSSI-PLEAISDGYDEGGYAQAESIEAYLE 90 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~r--Gh~V~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~ 90 (464)
||||++-..+-|++.-+.++.++|+++ +.+|++++.+.+.+.+.. ...+ .++.++ ... .....
T Consensus 1 MkILii~~~~iGD~il~~p~i~~Lk~~~P~~~I~~l~~~~~~~l~~~---~p~id~v~~~~--~~~----~~~~~----- 66 (348)
T d1pswa_ 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSR---MPEVNEAIPMP--LGH----GALEI----- 66 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTT---CTTEEEEEEC-------------CH-----
T ss_pred CeEEEEcCCChHHHHHHHHHHHHHHHHCCCCEEEEEEChhHHHHHhh---CCCcCEEEEec--Ccc----ccchh-----
Confidence 799999999999999999999999987 899999999888776661 2223 233332 111 00111
Q ss_pred HHHHhCcHHHHHHHHHhcCCCCCccEEEeCCchhhHHHHHHHcCCccEEE
Q 012412 91 RFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPF 140 (464)
Q Consensus 91 ~~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~~~~~~~A~~~giP~v~~ 140 (464)
.....++..+.. ..+|++|.-........++...+++....
T Consensus 67 -------~~~~~l~~~l~~--~~~D~~i~~~~~~~~~~~~~~~~~~~~~~ 107 (348)
T d1pswa_ 67 -------GERRKLGHSLRE--KRYDRAYVLPNSFKSALVPLFAGIPHRTG 107 (348)
T ss_dssp -------HHHHHHHHHTTT--TTCSEEEECSCCSGGGHHHHHTTCSEEEE
T ss_pred -------hhhhhHHHHhhh--cccceEeecccccchhhHHHhhccccccc
Confidence 122345555655 34799997655555666788888887654
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=97.70 E-value=0.00019 Score=59.86 Aligned_cols=144 Identities=15% Similarity=0.163 Sum_probs=84.0
Q ss_pred ceEEEEeccccc--CCHHHHHHHHHHHhh----CCCeEEEEEcCcc-cCcCChhhhhhccCCCcEEEEeccChH---Hhh
Q 012412 279 SVVYVSYGSFVE--LKAEEMEELAWGLKS----SDQHFLWVVRESE-QAKLPKKFSDETLTSHKSLVVSWCPQL---EVL 348 (464)
Q Consensus 279 ~~v~vs~Gs~~~--~~~~~~~~~~~al~~----~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~nv~~~~~~p~~---~ll 348 (464)
..+++..|.... -..+.+-..+..+.. .+.++++...+.. .......+.+. ....+.+.++++.. .++
T Consensus 32 ~~~il~~Grl~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~G~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~ 109 (196)
T d2bfwa1 32 GVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEK--HGNVKVITEMLSREFVRELY 109 (196)
T ss_dssp CEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEECCBCHHHHHHHHHHHHH--CTTEEEECSCCCHHHHHHHH
T ss_pred CCEEEEEcCCCccccCHHHHHHHHHhhhcccCCCCeEEEEEeecccchhhhhhhhhhc--cceeEEeeeccccccchhcc
Confidence 355677887652 134444444443322 1234444432211 11111222222 44555666888865 788
Q ss_pred ccccccceec----cCChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcCC--ch
Q 012412 349 AHEATGCFVT----HCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGE--RG 422 (464)
Q Consensus 349 ~~~~~~~vI~----HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~~--~~ 422 (464)
..+++ +|. .|-.+++.||+++|+|+|+.-. ..... +... +.|..++..+.+++.++|.+++... ..
T Consensus 110 ~~~di--~v~ps~~e~~~~~~~Eam~~G~pvI~~~~----~~~~e-~i~~-~~g~~~~~~~~~~l~~~i~~~l~~~~~~~ 181 (196)
T d2bfwa1 110 GSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRD-IITN-ETGILVKAGDPGELANAILKALELSRSDL 181 (196)
T ss_dssp TTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESC----HHHHH-HCCT-TTCEEECTTCHHHHHHHHHHHHHCCHHHH
T ss_pred ccccc--cccccccccccccchhhhhcCceeeecCC----Cccce-eecC-CceeeECCCCHHHHHHHHHHHHhCCHHHH
Confidence 99999 773 4446799999999999997432 22333 3355 6787777778999999999988632 12
Q ss_pred HHHHHHHHHH
Q 012412 423 KELRRNAGKW 432 (464)
Q Consensus 423 ~~~~~~a~~l 432 (464)
+.++++|++.
T Consensus 182 ~~~~~~a~~~ 191 (196)
T d2bfwa1 182 SKFRENCKKR 191 (196)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3455555443
|
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Probab=95.57 E-value=0.22 Score=46.35 Aligned_cols=112 Identities=12% Similarity=0.065 Sum_probs=73.0
Q ss_pred CcEEEEeccChH---Hhhccccccceec---cCChh-HHHHHHHhCCc-----EeccCCccchhhHHHHHHhHhcceeec
Q 012412 334 HKSLVVSWCPQL---EVLAHEATGCFVT---HCGWN-STMEALSLGVP-----MVAMPQWSDQSTNAKYILDVWKTGLKF 401 (464)
Q Consensus 334 ~nv~~~~~~p~~---~ll~~~~~~~vI~---HgG~~-s~~eal~~GvP-----~v~~P~~~DQ~~na~rl~~~~G~g~~l 401 (464)
+.+.+...+++. .++..+++ ++. .-|+| +..|++++|+| +|+-.+.+ - -+.+ +-|+.+
T Consensus 331 ~~v~~~~~~~~~~l~a~~~~Adv--~v~~s~~EG~~lv~~Ea~a~~~p~~~g~lIlS~~~G----~---~~~l-~~g~lV 400 (456)
T d1uqta_ 331 PLYYLNQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAG----A---ANEL-TSALIV 400 (456)
T ss_dssp SEEEECSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBG----G---GGTC-TTSEEE
T ss_pred ceeeccCCcCHHHHhHHHhhhce--eecCCccCCCCcHHHHHHHhCCCCCCCcEEEeCCCC----C---HHHh-CCeEEE
Confidence 456666777766 66777888 663 46776 56999999999 44333221 1 1223 446777
Q ss_pred cCcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHhhc
Q 012412 402 PIVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLACSK 461 (464)
Q Consensus 402 ~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l~~~~ 461 (464)
+..+.++++++|.++|+++.. +-+++.+++.+.++. -+...-.+.++++|.+-+
T Consensus 401 nP~d~~~~A~ai~~aL~~~~~-er~~~~~~~~~~v~~-----~~~~~W~~~fl~~l~~~~ 454 (456)
T d1uqta_ 401 NPYDRDEVAAALDRALTMSLA-ERISRHAEMLDVIVK-----NDINHWQECFISDLKQIV 454 (456)
T ss_dssp CTTCHHHHHHHHHHHHTCCHH-HHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHSC
T ss_pred CcCCHHHHHHHHHHHHcCCHH-HHHHHHHHHHHHHHH-----CCHHHHHHHHHHHHHhhc
Confidence 777999999999999986521 334445555555553 344555688888887644
|
| >d1j9ja_ c.106.1.1 (A:) SurE homolog TM1662 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: SurE-like superfamily: SurE-like family: SurE-like domain: SurE homolog TM1662 species: Thermotoga maritima [TaxId: 2336]
Probab=94.83 E-value=0.1 Score=44.20 Aligned_cols=115 Identities=10% Similarity=0.032 Sum_probs=66.1
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccC-CCCCCceEEEccCCCCCCCCCCccCHHHHHHHH
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRD-SSSSSIPLEAISDGYDEGGYAQAESIEAYLERF 92 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 92 (464)
||||+..--|. |---+..|+++| +++|+|+++.+...+.-.-++ .....+.+..+...-....+....++..-...
T Consensus 1 M~ILltNDDGi-~s~gl~~L~~~l-~~~~~V~vvAP~~~~S~~g~ait~~~~l~~~~~~~~~~~~~~~v~GTPaDcv~~- 77 (247)
T d1j9ja_ 1 MRILVTNDDGI-QSKGIIVLAELL-SEEHEVFVVAPDKERSATGHSITIHVPLWMKKVFISERVVAYSTTGTPADCVKL- 77 (247)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHH-TTTSEEEEEEESSCCTTCTTCCCCSSCCCEEECCCSSSEEEEEESSCHHHHHHH-
T ss_pred CeEEEEcCCCC-CChHHHHHHHHH-hcCCeEEEEecCCCCcCCcccccCCCCcceEEeecCCCceEEEeCCchHHHHHH-
Confidence 68888777776 444577888888 469999999998776655533 12334555555422111011122222222111
Q ss_pred HHhCcHHHHHHHHHhcCCCCCccEEEeCC----------ch---hhHHHHHHHcCCccEEEecc
Q 012412 93 WQIGPQTLTELVEKMNGSDSPVDCIVYDS----------IL---LWALDVAKKFGLLGAPFLTQ 143 (464)
Q Consensus 93 ~~~~~~~l~~~~~~l~~~~~p~DlVI~D~----------~~---~~~~~~A~~~giP~v~~~~~ 143 (464)
.+..+.. .++|+||+.. ++ ..++.-|..+|||.|.+|..
T Consensus 78 ----------al~~l~~--~~pDlVvSGIN~G~N~g~dv~ySGTVgAA~ea~~~gipsiA~S~~ 129 (247)
T d1j9ja_ 78 ----------AYNVVMD--KRVDLIVSGVNRGPNMGMDILHSGTVSGAMEGAMMNIPSIAISSA 129 (247)
T ss_dssp ----------HHHTTST--TCCSEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEES
T ss_pred ----------hhhhccc--CcccEEEecccCCCccchhhhhHHHHHHHHHHHhcCCCcceehhh
Confidence 1122333 2359999753 22 33566678999999998753
|
| >d1l5xa_ c.106.1.1 (A:) SurE homolog PAE2908 (SurE-alpha) {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: SurE-like superfamily: SurE-like family: SurE-like domain: SurE homolog PAE2908 (SurE-alpha) species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=93.08 E-value=0.32 Score=41.70 Aligned_cols=113 Identities=12% Similarity=-0.007 Sum_probs=68.6
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccC-CCCCCceEEEccCCCCCCCCCCccCHHHHHHHH
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRD-SSSSSIPLEAISDGYDEGGYAQAESIEAYLERF 92 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 92 (464)
||||+..--|. |---+.+|+++|.+.| +|+++.+...+.-.-+. .....+++..+...... .+....++..-...-
T Consensus 1 M~ILlTNDDGi-~a~Gl~~L~~~l~~~g-~V~vvAP~~~~Sg~g~ait~~~pl~~~~~~~~~~~-~~~v~GTPaDCV~lg 77 (276)
T d1l5xa_ 1 MKILVTNDDGV-HSPGLRLLYQFALSLG-DVDVVAPESPKSATGLGITLHKPLRMYEVDLCGFR-AIATSGTPSDTVYLA 77 (276)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHGGGS-EEEEEEESSCTTTSCSSCCCSSCBCEEEEECSSSE-EEEESSCHHHHHHHH
T ss_pred CeEEEEcCCCC-CCHHHHHHHHHHHhcC-CEEEEecCCCCcCcccceeCCCCcEEEEeecCCce-EEEEcCcchhhhhhh
Confidence 68888877776 5667889999999998 69999988776655433 22345666666532111 122233333322211
Q ss_pred HHhCcHHHHHHHHHhcCCCCCccEEEeCC-----------c---hhhHHHHHHHcCCccEEEecc
Q 012412 93 WQIGPQTLTELVEKMNGSDSPVDCIVYDS-----------I---LLWALDVAKKFGLLGAPFLTQ 143 (464)
Q Consensus 93 ~~~~~~~l~~~~~~l~~~~~p~DlVI~D~-----------~---~~~~~~~A~~~giP~v~~~~~ 143 (464)
. ..+. ++||+||+.. + +..++.-|..+|||.|.+|..
T Consensus 78 l-----------~~~~---~~pDlVvSGIN~G~N~G~dv~~~SGTVgAA~Ea~~~GipsIA~S~~ 128 (276)
T d1l5xa_ 78 T-----------FGLG---RKYDIVLSGINLGDNTSLQVILSSGTLGAAFQAALLGIPALAYSAY 128 (276)
T ss_dssp H-----------HHHT---SCCSEEEEEEEEBCCCSHHHHTTCHHHHHHHHHHHTTCCEEEEEEC
T ss_pred h-----------ccCC---CCCCEEEECCcCCccCCceeEEechHHHHHHHHHhcCCCceeeeec
Confidence 1 1122 2359999643 1 133555678999999998854
|
| >d1qkka_ c.23.1.1 (A:) Transcriptional regulatory protein DctD, receiver domain {Sinorhizobium meliloti [TaxId: 382]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: CheY-like family: CheY-related domain: Transcriptional regulatory protein DctD, receiver domain species: Sinorhizobium meliloti [TaxId: 382]
Probab=88.96 E-value=3.4 Score=30.74 Aligned_cols=109 Identities=13% Similarity=0.063 Sum_probs=67.1
Q ss_pred cCCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEec-cChHHhhccccccceeccCChhHHHH-
Q 012412 290 ELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSW-CPQLEVLAHEATGCFVTHCGWNSTME- 367 (464)
Q Consensus 290 ~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~-~p~~~ll~~~~~~~vI~HgG~~s~~e- 367 (464)
-..+.....+...|+..|+.+.....+... + +.+. . .+..+.+.++ +|.. .|...+.+
T Consensus 7 DDd~~~~~~l~~~L~~~g~~v~~~~~~~~a--l-~~l~-~--~~~dlil~D~~mP~~--------------~G~el~~~l 66 (140)
T d1qkka_ 7 DDDRDLRKAMQQTLELAGFTVSSFASATEA--L-AGLS-A--DFAGIVISDIRMPGM--------------DGLALFRKI 66 (140)
T ss_dssp CSCHHHHHHHHHHHHHTTCEEEEESCHHHH--H-HTCC-T--TCCSEEEEESCCSSS--------------CHHHHHHHH
T ss_pred ECCHHHHHHHHHHHHHCCCEEEEeCChHHH--H-HHHh-c--cCcchHHHhhccCCC--------------CHHHHHHHH
Confidence 456777777888889899988766433211 0 1111 1 3345666664 2322 12222212
Q ss_pred -HHHhCCcEeccCCccchhhHHHHHHhHhcceeecc-CcCHHHHHHHHHHHhcCC
Q 012412 368 -ALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP-IVKRDAIADCISEILEGE 420 (464)
Q Consensus 368 -al~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~-~~~~~~l~~~i~~ll~~~ 420 (464)
.....+|+|++--..|. ..+.+.-+. |+--.+. .++.+.|..++++++...
T Consensus 67 r~~~~~~pvI~lT~~~~~-~~~~~a~~~-Ga~dyl~KP~~~~~L~~~i~~~~~~~ 119 (140)
T d1qkka_ 67 LALDPDLPMILVTGHGDI-PMAVQAIQD-GAYDFIAKPFAADRLVQSARRAEEKR 119 (140)
T ss_dssp HHHCTTSCEEEEECGGGH-HHHHHHHHT-TCCEEEESSCCHHHHHHHHHHHHHHH
T ss_pred HHhCCCCcEEEEECCCCH-HHHHHHHHc-CCCEeecCCCCHHHHHHHHHHHHHHH
Confidence 23456899988765555 455556667 8776666 899999999999998653
|
| >d7reqa2 c.23.6.1 (A:561-728) Methylmalonyl-CoA mutase alpha subunit, C-terminal domain {Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Cobalamin (vitamin B12)-binding domain family: Cobalamin (vitamin B12)-binding domain domain: Methylmalonyl-CoA mutase alpha subunit, C-terminal domain species: Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]
Probab=85.45 E-value=0.32 Score=38.11 Aligned_cols=46 Identities=11% Similarity=0.007 Sum_probs=39.0
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCccccccc
Q 012412 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSL 56 (464)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~ 56 (464)
.++.||++.+.++-+|.....-++..|.+.|++|.+.......+.+
T Consensus 35 gr~pkVlla~~g~D~Hd~G~~~va~~l~~~G~eVi~lg~~~~~e~i 80 (168)
T d7reqa2 35 GRRPRILLAKMGQDGHDRGQKVIATAYADLGFDVDVGPLFQTPEET 80 (168)
T ss_dssp SSCCEEEEECBTTCCCCHHHHHHHHHHHHTTCEEEECCTTBCHHHH
T ss_pred CCCCeEEEEeCCccHHHHHHHHHHHHHHhCCcceecCCCcCcHHHH
Confidence 4567999999999999999999999999999999998765444433
|
| >d1ccwa_ c.23.6.1 (A:) Glutamate mutase, small subunit {Clostridium cochlearium [TaxId: 1494]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Cobalamin (vitamin B12)-binding domain family: Cobalamin (vitamin B12)-binding domain domain: Glutamate mutase, small subunit species: Clostridium cochlearium [TaxId: 1494]
Probab=84.72 E-value=0.5 Score=35.61 Aligned_cols=45 Identities=7% Similarity=-0.037 Sum_probs=38.5
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCccccccc
Q 012412 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSL 56 (464)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~ 56 (464)
++.||++.+.++-.|.....-++..|..+|++|.+++.....+.+
T Consensus 2 ~k~kVvi~~~~gD~H~lG~~mva~~l~~~G~~V~~LG~~~p~e~i 46 (137)
T d1ccwa_ 2 EKKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVLSPQELF 46 (137)
T ss_dssp CCCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEEECHHHH
T ss_pred CCCEEEEEecCCChhHHHHHHHHHHHHHCCCeEEecccccCHHHH
Confidence 456899999999999999999999999999999999875444433
|
| >d1yioa2 c.23.1.1 (A:3-130) Response regulatory protein StyR, N-terminal domain {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: CheY-like family: CheY-related domain: Response regulatory protein StyR, N-terminal domain species: Pseudomonas fluorescens [TaxId: 294]
Probab=84.58 E-value=2 Score=31.54 Aligned_cols=114 Identities=20% Similarity=0.177 Sum_probs=66.9
Q ss_pred CceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEec-cChHHhhccccccce
Q 012412 278 ESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSW-CPQLEVLAHEATGCF 356 (464)
Q Consensus 278 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~-~p~~~ll~~~~~~~v 356 (464)
+|.|+| .-.++.....+...|+..|+.+.....+. +.+ +-+.+ .+.++.+.++ +|..
T Consensus 2 kP~ILi-----VDDd~~~~~~l~~~L~~~g~~v~~a~~~~--~al-~~~~~---~~~dliilD~~mp~~----------- 59 (128)
T d1yioa2 2 KPTVFV-----VDDDMSVREGLRNLLRSAGFEVETFDCAS--TFL-EHRRP---EQHGCLVLDMRMPGM----------- 59 (128)
T ss_dssp CCEEEE-----ECSCHHHHHHHHHHHHTTTCEEEEESSHH--HHH-HHCCT---TSCEEEEEESCCSSS-----------
T ss_pred CCEEEE-----EECCHHHHHHHHHHHHHcCCCccccccHH--HHH-HHHHh---cCCCEeehhhhcccc-----------
Confidence 456666 35677788888889999999876554332 111 11110 3345666665 2322
Q ss_pred eccCChhHHHHHHHh---CCcEeccCCccchhhHHHHHHhHhcceeecc-CcCHHHHHHHHHHHhcC
Q 012412 357 VTHCGWNSTMEALSL---GVPMVAMPQWSDQSTNAKYILDVWKTGLKFP-IVKRDAIADCISEILEG 419 (464)
Q Consensus 357 I~HgG~~s~~eal~~---GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~-~~~~~~l~~~i~~ll~~ 419 (464)
....+.+.+.. -+|++++-. .+....+.+.-+. |+--.+. .++.++|..+|+++|+.
T Consensus 60 ----~G~~~~~~i~~~~~~~~ii~lt~-~~~~~~~~~a~~~-Ga~dyl~KP~~~~~L~~~i~~~l~~ 120 (128)
T d1yioa2 60 ----SGIELQEQLTAISDGIPIVFITA-HGDIPMTVRAMKA-GAIEFLPKPFEEQALLDAIEQGLQL 120 (128)
T ss_dssp ----CHHHHHHHHHHTTCCCCEEEEES-CTTSCCCHHHHHT-TEEEEEESSCCHHHHHHHHHHHHHH
T ss_pred ----hhHHHHHHHHhhCCCCeEEEEEE-ECCHHHHHHHHHC-CCCEEEECCCCHHHHHHHHHHHHHH
Confidence 22233333333 345555432 2444455566677 8776666 99999999999999954
|
| >d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) species: Escherichia coli [TaxId: 562]
Probab=83.69 E-value=0.32 Score=40.27 Aligned_cols=41 Identities=20% Similarity=0.353 Sum_probs=34.3
Q ss_pred CCcEEEEEcCCCccChHHH------------HHHHHHHHhCCCeEEEEeCccc
Q 012412 12 KLAHCLVLTYPGQGHINPL------------LQFSRRLQHKGIKVTLVTTRFF 52 (464)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~------------l~la~~L~~rGh~V~~~~~~~~ 52 (464)
+.+|||+...++.-++.|. .+||+++..+||+|++++.+..
T Consensus 5 ~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~ 57 (223)
T d1u7za_ 5 KHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS 57 (223)
T ss_dssp TTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC
T ss_pred CCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccc
Confidence 4568888888887777664 6899999999999999999764
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=82.04 E-value=9.7 Score=29.97 Aligned_cols=35 Identities=14% Similarity=0.227 Sum_probs=24.8
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
.+.||+++-..| .+- ..++++|.++||+|+.++..
T Consensus 2 ~~kkIlV~GatG--~iG--~~v~~~Ll~~g~~V~~~~R~ 36 (205)
T d1hdoa_ 2 AVKKIAIFGATG--QTG--LTTLAQAVQAGYEVTVLVRD 36 (205)
T ss_dssp CCCEEEEESTTS--HHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECCCC--HHH--HHHHHHHHHCcCEEEEEEcC
Confidence 466888665433 222 35788889999999999864
|
| >d1mb3a_ c.23.1.1 (A:) Cell division response regulator DivK {Caulobacter crescentus [TaxId: 155892]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: CheY-like family: CheY-related domain: Cell division response regulator DivK species: Caulobacter crescentus [TaxId: 155892]
Probab=81.93 E-value=5.6 Score=28.56 Aligned_cols=107 Identities=14% Similarity=0.133 Sum_probs=64.3
Q ss_pred cCCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEec-cChHHhhccccccceeccCChhHHHHH
Q 012412 290 ELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSW-CPQLEVLAHEATGCFVTHCGWNSTMEA 368 (464)
Q Consensus 290 ~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~-~p~~~ll~~~~~~~vI~HgG~~s~~ea 368 (464)
-.++.....+...|+..|+++..+..+. +.+ +-+.+ .+.++.+.++ +|... |+. +.+.
T Consensus 8 DD~~~~~~~l~~~L~~~g~~v~~a~~~~--~al-~~~~~---~~~dlil~D~~mp~~d--------------G~e-l~~~ 66 (123)
T d1mb3a_ 8 EDNELNMKLFHDLLEAQGYETLQTREGL--SAL-SIARE---NKPDLILMDIQLPEIS--------------GLE-VTKW 66 (123)
T ss_dssp CSCHHHHHHHHHHHHHTTCEEEEESCHH--HHH-HHHHH---HCCSEEEEESBCSSSB--------------HHH-HHHH
T ss_pred ECCHHHHHHHHHHHHHCCCEEEEECCHH--HHH-HHHHh---CCCCEEEEEeccCCCc--------------HHH-HHHH
Confidence 4567777778888999999887554332 111 11111 2345666664 34331 222 2222
Q ss_pred H-----HhCCcEeccCCccchhhHHHHHHhHhcceeecc-CcCHHHHHHHHHHHhcC
Q 012412 369 L-----SLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP-IVKRDAIADCISEILEG 419 (464)
Q Consensus 369 l-----~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~-~~~~~~l~~~i~~ll~~ 419 (464)
+ ...+|++++--..+ .....+..+. |+--.+. .++.++|.+.|+++|+.
T Consensus 67 ir~~~~~~~iPii~lt~~~~-~~~~~~~~~~-G~~~~l~KP~~~~~L~~~i~~~l~r 121 (123)
T d1mb3a_ 67 LKEDDDLAHIPVVAVTAFAM-KGDEERIREG-GCEAYISKPISVVHFLETIKRLLER 121 (123)
T ss_dssp HHHSTTTTTSCEEEEC-------CHHHHHHH-TCSEEECSSCCHHHHHHHHHHHHSC
T ss_pred HHhCCCcCCCCeEEEEEecC-HHHHHHHHHc-CCCEEEECCCCHHHHHHHHHHHHhC
Confidence 3 25679888764433 4445667788 8877777 89999999999999863
|
| >d1gsaa1 c.30.1.3 (A:1-122) Prokaryotic glutathione synthetase, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: Prokaryotic glutathione synthetase, N-terminal domain domain: Prokaryotic glutathione synthetase, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=81.15 E-value=0.98 Score=33.12 Aligned_cols=39 Identities=8% Similarity=0.036 Sum_probs=31.3
Q ss_pred CcEEEEEcCCCc---cChHHHHHHHHHHHhCCCeEEEEeCcc
Q 012412 13 LAHCLVLTYPGQ---GHINPLLQFSRRLQHKGIKVTLVTTRF 51 (464)
Q Consensus 13 ~~~il~~~~~~~---GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (464)
+|||+|+.-+-. =.-.-+++|+++.++|||+|.++.+..
T Consensus 1 mmkI~FimDpie~l~~~kDTT~~Lm~eAq~Rg~~v~~~~~~d 42 (122)
T d1gsaa1 1 MIKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMGD 42 (122)
T ss_dssp CCEEEEECSCGGGCCTTTCHHHHHHHHHHHTTCEEEEECGGG
T ss_pred CcEEEEEeCCHHHCCCCCChHHHHHHHHHHCCCeEEEEecCc
Confidence 578998866532 455678999999999999999998864
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